BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254781003|ref|YP_003065416.1| hypothetical protein CLIBASIA_04520 [Candidatus Liberibacter asiaticus str. psy62] (304 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|254781003|ref|YP_003065416.1| hypothetical protein CLIBASIA_04520 [Candidatus Liberibacter asiaticus str. psy62] gi|254040680|gb|ACT57476.1| hypothetical protein CLIBASIA_04520 [Candidatus Liberibacter asiaticus str. psy62] Length = 304 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 304/304 (100%), Positives = 304/304 (100%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY Sbjct: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN Sbjct: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS Sbjct: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE Sbjct: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI Sbjct: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 Query: 301 DYDF 304 DYDF Sbjct: 301 DYDF 304 >gi|148982124|ref|ZP_01816600.1| hypothetical protein VSWAT3_19371 [Vibrionales bacterium SWAT-3] gi|145960657|gb|EDK26003.1| hypothetical protein VSWAT3_19371 [Vibrionales bacterium SWAT-3] Length = 291 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 75/308 (24%), Positives = 139/308 (45%), Gaps = 23/308 (7%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +++ L+ + ++A+ + + SWNI LS E V+ + + R +D+ L +Y Sbjct: 1 MKRLQKWLMLGCLLSNQAIAEPLTISSWNIEWLSTNEAVNKFSDK--RDQADFDKLGRYF 58 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 ++L+AD+V QE+ NA+ +V + N + + + +T AVRK Sbjct: 59 QSLNADVVAFQEVDDVNAIQRVAGDQYQILMSDRALPKNGNHQFKEVNQYTGFAVRKGVA 118 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 +PL ++ S + R A +++E K I +L +HLK+ C S + C Sbjct: 119 LTDYADFPL----ETTSNSKLRFASYIVIETETKPIHMLSVHLKAGC---SGAYKSNRDC 171 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 S L +QAQ L WI Q++ + + I GDFN + Y D WK + ++ Sbjct: 172 SRLKEQAQQLNKWIKQRERNNEDYAILGDFNHNLAYS--RDWIWKELTQYTDAQLATRKT 229 Query: 242 DSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + C N ++ + + ID+ V+ ++ + ++ D+ +LSDH Sbjct: 230 RADCKVRSNRNNHRTHQFRSVIDHIVVSESL----NAAPAKQQVFKTQDVLDY--KLSDH 283 Query: 296 CPISIDYD 303 CP+S + Sbjct: 284 CPVSTTIN 291 >gi|84393951|ref|ZP_00992692.1| hypothetical protein V12B01_14350 [Vibrio splendidus 12B01] gi|84375450|gb|EAP92356.1| hypothetical protein V12B01_14350 [Vibrio splendidus 12B01] Length = 292 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 74/307 (24%), Positives = 137/307 (44%), Gaps = 23/307 (7%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +++ ++ + + + A+ + + SWNI LS ++ K S KR +D+ L QY Sbjct: 1 MKRLQKWIMLACLLSSQTFAEPLTISSWNIEWLSTN--EAVNKFSSKRNQADFDKLEQYF 58 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 ++LDAD+V QE+ N + ++ + N +++ + +T AVRK Sbjct: 59 QSLDADVVAFQEVDDVNDIQRITGNQYKILMSDRALPKNSNRQFKEVNQYTGFAVRKGIT 118 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 +PL + + + R A ++VE + I +L +HLK+ C S + C Sbjct: 119 LTDYADFPL----ERSANSKLRFASYMVVETDSNPIHMLSVHLKAGC---SGAYKSNRDC 171 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 S L QA+ L WI Q++ + I GDFN ++Y D WK + N ++ Sbjct: 172 SRLKDQAKQLNKWIQQRERKGEDYAILGDFNHNLSYS--RDWMWKDMTQNTDAQLVTRKT 229 Query: 242 DSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + C N ++ + + ID+ V+ ++ + ++ D+ +LSDH Sbjct: 230 RADCKVRSNRNNHRTHQFRSVIDHIVVSKSL----DASPAKQKVFETQDVLDY--KLSDH 283 Query: 296 CPISIDY 302 CP+S Sbjct: 284 CPVSTTI 290 >gi|218676474|ref|YP_002395293.1| Endonuclease/Exonuclease/phosphatase family [Vibrio splendidus LGP32] gi|218324742|emb|CAV26393.1| Endonuclease/Exonuclease/phosphatase family [Vibrio splendidus LGP32] Length = 291 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 72/307 (23%), Positives = 137/307 (44%), Gaps = 23/307 (7%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +++ ++ + + + + + + SWNI LS E V+ + + +R +D+ L QY Sbjct: 1 MKRLQKWIMLGCLLSSQAFGEPLTISSWNIEWLSTNEAVNKFSD--QRDQADFDKLEQYF 58 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 ++L++D++ QE+ NA+ ++ + N + + + +T AVRK + Sbjct: 59 QSLNSDVLAFQEVDDINAIQRIAGDQYKILMSDRALPENSNHQFKEVNQYTGFAVRKGII 118 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 +PL + R A ++VE + K I +L +HLK+ C S + C Sbjct: 119 LTDYADFPLESGA----NSKLRFASYMVVETDTKPIHMLSVHLKAGC---SGAYKSNRDC 171 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 S L QAQ L WI Q++ + I GDFN ++Y D WK + N ++ Sbjct: 172 SRLKDQAQQLNKWIQQRERQGQDYAILGDFNHNLSYS--RDWMWKDLTQNADAQLATRKT 229 Query: 242 DSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + C N ++ + + ID+ V+ ++ + ++ D+ +LSDH Sbjct: 230 RADCKVRSNRNNHRTHQFRSVIDHIVVSKSL----DASPAKQKVFETQDVLDY--KLSDH 283 Query: 296 CPISIDY 302 CP+S Sbjct: 284 CPVSTTI 290 >gi|315122019|ref|YP_004062508.1| hypothetical protein CKC_01345 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495421|gb|ADR52020.1| hypothetical protein CKC_01345 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 315 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 166/304 (54%), Positives = 216/304 (71%), Gaps = 8/304 (2%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 ++R L L F +P + AQ++R+ SWNINTLSE+ G+ L KNSV R +DY LLR+Y Sbjct: 17 LLRSVALVLFFCFIPN-ENFAQRIRIASWNINTLSEKSGMPLLKNSVVREDADYDLLRRY 75 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 A+ L+ADIV LQEMGSY A+ +VFP++TW I YS H+ TAI RK Sbjct: 76 AERLNADIVCLQEMGSYAAIKRVFPEDTWEILYSGNDSDEHTVH-------TAIVARKGT 128 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 V VL++SY + S+AG RR+VE+L E+NG KIW+LDIHLKSFCF+DSL++ Y+ S Sbjct: 129 VHVLEKSYLSMDTNKLDSKAGKRRSVEILFEVNGIKIWLLDIHLKSFCFVDSLKDAYTLS 188 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 C L+ Q WL WI QKK S +PF+IAGDFNRKIN+ G+ND+ W I + LIR P + Sbjct: 189 CYTLNLQVNWLNKWIHQKKRSNIPFIIAGDFNRKINHFGDNDELWGKISKDTILIRVPNK 248 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 K S CNA+K++R + PID+FVMDQNAYK+LI+ S+SE+ Y E+DIK RG RLSDHCPI+ Sbjct: 249 KRSWCNAHKSIRKREPIDFFVMDQNAYKYLIENSYSEVSYIEEDIKKRGYRLSDHCPITT 308 Query: 301 DYDF 304 DY+F Sbjct: 309 DYNF 312 >gi|269959773|ref|ZP_06174152.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269835527|gb|EEZ89607.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 287 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 72/309 (23%), Positives = 121/309 (39%), Gaps = 29/309 (9%) Query: 3 RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 + + L + + L SWNI LS G V RT D+ L Y Sbjct: 1 MRSLFVTTILLFSSLSFAQNSINLTSWNIEWLSIDGG------KVSRTPQDFEKLTHYVD 54 Query: 63 NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 ADI+ QE+ S A+ K + N + ++ + +T AVR Sbjct: 55 KTQADILAFQEVESAAAIQKAVGNDFTIYLSDRANASNRHLQFNDTNQYTGFAVRNGVNV 114 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + + + + R A L++ N + +L +HLK+ C S + C Sbjct: 115 LDK-----PDFSITRGNSKLRFASYLVLNPNQDNETHLLSVHLKAGC---SGAYRNNRDC 166 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 ++ QQ Q L WI ++++ +V+ GDFN + Y G D W+ + N K Sbjct: 167 KIVKQQGQALAKWIKAREDNKQQYVVLGDFNHNLGYRG--DWLWEVLSDNTDAKLVTKNT 224 Query: 242 DSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + C N NK + + ID+ ++ + S + ++ D+ +LSDH Sbjct: 225 KAECKVRSNRNPNKTHQFRSVIDHIIVSGDL----KASSGVQTVFKTQDVLDY--KLSDH 278 Query: 296 CPISIDYDF 304 CP+S F Sbjct: 279 CPVSTTLSF 287 >gi|269967746|ref|ZP_06181794.1| hypothetical protein VMC_32240 [Vibrio alginolyticus 40B] gi|269827652|gb|EEZ81938.1| hypothetical protein VMC_32240 [Vibrio alginolyticus 40B] Length = 287 Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 75/310 (24%), Positives = 125/310 (40%), Gaps = 30/310 (9%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +R + L+ + + + L SWNI LS G V RT D+ L Y Sbjct: 1 MRSLFVTLILLFSSLSFAQ-NSINLTSWNIEWLSIDGG------KVSRTPQDFEKLTHYV 53 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 ADI+ QE+ S A+ K + N + ++ + +T AVR Sbjct: 54 DKTQADILAFQEVESVAAMQKAVGNDFTIYLSDRSNASNRHLQFNDTNQYTGFAVRNGVS 113 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPS 180 + + + R A L++ N + + +L +HLK+ C S + Sbjct: 114 VLDT-----PDFSITRGNSKLRFASYLVLNPNQENETHLLSVHLKAGC---SGAYRNNRD 165 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 C ++ QQ Q L WI ++++ +V+ GDFN + Y G D W I N S K+ Sbjct: 166 CKIVKQQGQALAKWIKAREDNKQHYVVLGDFNHNLGYQG--DWLWDVISDNTSAKLVTKD 223 Query: 241 KDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + C N NK + + ID+ ++ + S + ++ D+ +LSD Sbjct: 224 TKAECKVRSNRNPNKTHQFRSVIDHIIVSGDL----KASSGVQTVFKTQDVLDY--KLSD 277 Query: 295 HCPISIDYDF 304 HCP+S F Sbjct: 278 HCPVSTTLTF 287 >gi|162147973|ref|YP_001602434.1| endonuclease/exonuclease/phosphatase family protein [Gluconacetobacter diazotrophicus PAl 5] gi|209542591|ref|YP_002274820.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter diazotrophicus PAl 5] gi|161786550|emb|CAP56132.1| putative endonuclease/exonuclease/phosphatase family [Gluconacetobacter diazotrophicus PAl 5] gi|209530268|gb|ACI50205.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter diazotrophicus PAl 5] Length = 290 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 73/304 (24%), Positives = 135/304 (44%), Gaps = 22/304 (7%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQ--EGVSLWKNSVKRTTSDYTLLRQ 59 +R++ A + + + + +++ +WN++ L+ + +L + R +D L Sbjct: 5 LRQWACAGLVAVALAHPAAGRTIKVSTWNLDWLTARAAGDPTLPPDVHPRADADLRRLAV 64 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 YA LDADIV QE+ S A++FP + I + + ++ T +AV Sbjct: 65 YAARLDADIVGFQEVDSPALAARLFPPGRYRIVMTADPVV----------QRTGLAVATS 114 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 L + R +++ + + VL +HLK+ C D+ + Sbjct: 115 LTIERHPDLAALDVYPPTAPHPLRSGLDVTIGDGTANLRVLVVHLKAGCR-DAAPSDRRA 173 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 +C L++Q L DW+ Q+++ VPF++ GDFNR + D F+ +D + L Sbjct: 174 ACLTLARQMAVLDDWVAQRQDEGVPFLVMGDFNRNLT---PGDPFFHLLDQDGPLTLATA 230 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + S C ID+ ++ A +L +S + Y+E D +R LSDHCP+S Sbjct: 231 GRASPCWGGTYF-----IDHLLLGNQARGWLRPDSLRVLTYDEQD-PARAPALSDHCPVS 284 Query: 300 IDYD 303 + + Sbjct: 285 VRLE 288 >gi|156976926|ref|YP_001447832.1| hypothetical protein VIBHAR_05711 [Vibrio harveyi ATCC BAA-1116] gi|156528520|gb|ABU73605.1| hypothetical protein VIBHAR_05711 [Vibrio harveyi ATCC BAA-1116] Length = 287 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 71/309 (22%), Positives = 120/309 (38%), Gaps = 29/309 (9%) Query: 3 RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 + + L + V L SWNI LS G V RT D+ L Y Sbjct: 1 MRSLFVTTILLFSSFSFAQNSVNLTSWNIEWLSIDGG------KVSRTPQDFEKLNHYVD 54 Query: 63 NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 ADI+ QE+ + AV K + N + ++ + +T AVR Sbjct: 55 KTQADILAFQEVENAAAVQKAVGNDFTIYLSDRSNASNRHLQFNDTNQYTGFAVRNGVSV 114 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + + + + R A L++ + + +L +HLK+ C S + C Sbjct: 115 LDK-----PDFSITRGNSKLRFASYLVLNPDQDNETHLLSVHLKAGC---SGAYRNNRDC 166 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 ++ QQ Q L WI ++++ +V+ GDFN + Y G D W+ + N K Sbjct: 167 KIVKQQGQALAKWIKAREDNKQQYVVLGDFNHNLGYRG--DWLWEVLSDNTDAKLVTKNT 224 Query: 242 DSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + C N K + + ID+ ++ + S + ++ D+ +LSDH Sbjct: 225 KAECKVRSNRNPKKTHQFRSVIDHIIVSGDL----KASSGVQTVFKTQDVLDY--KLSDH 278 Query: 296 CPISIDYDF 304 CP+S F Sbjct: 279 CPVSTTLTF 287 >gi|91224719|ref|ZP_01259980.1| hypothetical protein V12G01_08258 [Vibrio alginolyticus 12G01] gi|91190607|gb|EAS76875.1| hypothetical protein V12G01_08258 [Vibrio alginolyticus 12G01] Length = 287 Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats. Identities = 74/310 (23%), Positives = 124/310 (40%), Gaps = 30/310 (9%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +R + L+ + + + L SWNI LS G V RT D+ L Y Sbjct: 1 MRSLFVTLILLFSSLSFAQ-NSINLTSWNIEWLSIDGG------KVSRTPQDFEKLTHYV 53 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 ADI+ QE+ A+ K + N + ++ + +T AVR Sbjct: 54 DKTQADILAFQEVERAAAIQKAVGNDFTIYLSDRSNASNRHLQFNDTNQYTGFAVRNGVS 113 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPS 180 + + + + R A L++ N + + +L +HLK+ C S + Sbjct: 114 VLDK-----PDFSITRGNSKLRFASYLVLNPNQENETHLLSVHLKAGC---SGAYRNNRD 165 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 C ++ QQ Q L WI ++++ +V+ GDFN + Y G D W I N S K+ Sbjct: 166 CKIVKQQGQALAKWIKAREDNKQHYVVLGDFNHNLGYQG--DWLWDVISDNTSAKLVTKD 223 Query: 241 KDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + C N NK + + ID+ + + S + ++ D+ +LSD Sbjct: 224 TKAECKVRSNRNPNKTHQFRSVIDHIIASGDL----KASSGVQTVFKTQDVLDY--KLSD 277 Query: 295 HCPISIDYDF 304 HCP+S F Sbjct: 278 HCPVSTTLTF 287 >gi|153832821|ref|ZP_01985488.1| metal-dependent hydrolase [Vibrio harveyi HY01] gi|148870955|gb|EDL69845.1| metal-dependent hydrolase [Vibrio harveyi HY01] Length = 287 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 72/309 (23%), Positives = 118/309 (38%), Gaps = 29/309 (9%) Query: 3 RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 + + L + V L SWNI LS G V RT D+ L Y Sbjct: 1 MRSLFVTTILLFSSFSFAQNSVNLTSWNIEWLSIDGG------KVSRTPQDFEKLNHYVD 54 Query: 63 NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 ADI+ QE+ S AV K + N + ++ + +T AVR Sbjct: 55 KTQADILAFQEVESAAAVQKAVGNDFTIYLSDRSNASNRHLQFNDTNQYTGFAVRNGVSV 114 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + + + + R A L++ + + +L +HLK+ C S + C Sbjct: 115 LDK-----PDFSITRGNSKLRFASYLVLNPDQDNETHLLSVHLKAGC---SGAYRNNRDC 166 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 ++ QQ Q L WI ++ + +V+ GDFN + Y G D W + N K Sbjct: 167 KIVKQQGQALAKWIKARENNKQQYVVLGDFNHNLGYRG--DWLWDVLSDNTDAKLVTKNT 224 Query: 242 DSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + C N K + + ID+ ++ + S + ++ D+ +LSDH Sbjct: 225 KAECKVRSNRNPKKTHQFRSVIDHIIVSGDL----KASSGVQTVFKTQDVLDY--KLSDH 278 Query: 296 CPISIDYDF 304 CP+S F Sbjct: 279 CPVSTTLTF 287 >gi|58040215|ref|YP_192179.1| hypothetical protein GOX1784 [Gluconobacter oxydans 621H] gi|58002629|gb|AAW61523.1| Hypothetical protein GOX1784 [Gluconobacter oxydans 621H] Length = 280 Score = 165 bits (416), Expect = 9e-39, Method: Composition-based stats. Identities = 65/300 (21%), Positives = 129/300 (43%), Gaps = 24/300 (8%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 +L +F A ++L +WN++ L +L K+ D+ L Y ++ Sbjct: 1 MLVGLFLAGSMGPVSAHTIKLSTWNMDWLTLRPSGDPALPKDVPGGEHRDFAKLAAYVRH 60 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 LD+D+V +E A ++VF T+ I + + ++ +AVR+ Sbjct: 61 LDSDVVAFEETDGPLAASRVFSSTTYQIILTPDPVV----------QRVGVAVRRDLHVT 110 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + L + R +++ + + +L +HLK+ C+ D N SC Sbjct: 111 VNDELSALNVAGPGAPHQLRGGLDVTISDGHASLRLLVVHLKTGCW-DQPLNQRQHSCPT 169 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 L QQ + ++DW+ ++++ + + GDFNR++ +D + I+ + K S Sbjct: 170 LYQQVRIMQDWMLERQDEGEVYAVLGDFNRRLTL---HDPLMQQIEAETPVTLTTAGKAS 226 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 C + ID+ ++ A +L+ +S + Y D + + LSDHCP+S+ + Sbjct: 227 PCWGGEYF-----IDHILLGNAARDWLVPDSLRVMTYKNDTVPA---GLSDHCPVSVRLE 278 >gi|328470709|gb|EGF41620.1| hypothetical protein VP10329_07912 [Vibrio parahaemolyticus 10329] Length = 293 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 73/312 (23%), Positives = 135/312 (43%), Gaps = 34/312 (10%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +R + + + + + L SWNI LS G V RT+ D+ L QY Sbjct: 6 MRSLFVTALLIFSSTSLAQ-NSINLTSWNIEWLSINGG------KVSRTSDDFVKLNQYV 58 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKN 120 ADI+ QE+ S AV K + + I+ S N+ + S+ + +T AVRK Sbjct: 59 DKTQADIIAFQEVDSKAAVQKAVG-DGYAIYLSDRAQSNNKHLQFSDTNQYTGFAVRKDI 117 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSP 179 + + + R A ++V N K ++ +L +HLK+ C S S Sbjct: 118 EVSDPADFSIT-----RGNSKLRFASYIVVNPNQKDELHLLSVHLKAGC---SGAYKNSR 169 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 C LSQQ + L W++++++ + + GDFN ++Y D W + + + Sbjct: 170 DCQTLSQQGEALAKWVSEREKKKEQYAVMGDFNHNLSYQ--RDWLWAIMTLGNDAQLVTR 227 Query: 240 EKDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + C N +K + + ID+ ++ + ++ + L++ D+ +LS Sbjct: 228 DTQADCKVRSNKNPSKTHQFRSLIDHIIVSPQ----IKAKNAHQTLFSSQDVLDY--KLS 281 Query: 294 DHCPI--SIDYD 303 DHCP+ ++ + Sbjct: 282 DHCPVNATVTLN 293 >gi|28900797|ref|NP_800452.1| hypothetical protein VPA0942 [Vibrio parahaemolyticus RIMD 2210633] gi|28809243|dbj|BAC62285.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] Length = 293 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 72/312 (23%), Positives = 135/312 (43%), Gaps = 34/312 (10%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +R + + + + + L SWNI LS G V RT+ D+ L QY Sbjct: 6 MRSLFVTALLIFSSTSLAQ-NSINLTSWNIEWLSINGG------KVSRTSDDFVKLNQYV 58 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKN 120 ADI+ QE+ S AV K + + I+ S N+ + S+ + +T AVRK Sbjct: 59 DKTQADIIAFQEVDSKAAVQKAVG-DGYAIYLSDRAQSNNKHLQFSDTNQYTGFAVRKDI 117 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSP 179 + + + R A ++V + K ++ +L +HLK+ C S S Sbjct: 118 EVSDPADFSIT-----RGNSKLRFASYIVVNPSQKDELHLLSVHLKAGC---SGAYKNSR 169 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 C LSQQ + L W++++++ + + GDFN ++Y D W + + + Sbjct: 170 DCQTLSQQGEALAKWMSEREKKKEQYAVMGDFNHNLSYQ--RDWLWAIMTLGNDAQLVTR 227 Query: 240 EKDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + C N +K + + ID+ ++ + ++ + L++ D+ +LS Sbjct: 228 DTQADCKVRSNKNPSKTHQFRSLIDHIIVSPQ----IKAKNAHQTLFSSQDVLDY--KLS 281 Query: 294 DHCPI--SIDYD 303 DHCP+ ++ + Sbjct: 282 DHCPVNATVTLN 293 >gi|37676556|ref|NP_936952.1| hypothetical protein VVA0896 [Vibrio vulnificus YJ016] gi|37201098|dbj|BAC96922.1| hypothetical protein [Vibrio vulnificus YJ016] Length = 297 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 67/313 (21%), Positives = 128/313 (40%), Gaps = 29/313 (9%) Query: 2 IRKYVLALVFF-----LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 + K+ LAL F L+P AQ + SWN+ LS + ++ R D+ Sbjct: 1 MLKHALALFFTGLVYLLLPTPLLAAQPMTFTSWNMEWLSSTPSARVKES--HRNEEDFAK 58 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L Y + ++D++ QE+ A+ KV N +F + + + +T A+ Sbjct: 59 LAMYFQKTNSDVLAFQEVNDLAAIKKVVGTNYQILFSDRSNPRYQRFQFDDINQYTGFAI 118 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 +K L + + R A +++ ++ VL++HLK+ C S Sbjct: 119 KKGIPFRDVGDIQL-----NKGNSKLRFASYVIIGNTSNELHVLNVHLKAGC---SGAYK 170 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + +C L ++Q L WI+Q++ + +++ GDFN + Y ND + + Sbjct: 171 GNDACRTLRLESQALGQWISQRQSNKQTYLVLGDFNHNLAYR--NDWLMNELTSAGKIHL 228 Query: 237 FPKEKDSRCN------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 ++ + C NK + ID+ ++ + + L+ +D+ Sbjct: 229 LTEDTKANCKVRSKKQPNKVHSFRSLIDHIIVSEGLS----ASQAEQKLFTSNDVLKY-- 282 Query: 291 RLSDHCPISIDYD 303 +LSDHCP+S Sbjct: 283 QLSDHCPVSTTVT 295 >gi|260365700|ref|ZP_05778214.1| metal-dependent hydrolase [Vibrio parahaemolyticus K5030] gi|260896112|ref|ZP_05904608.1| metal-dependent hydrolase [Vibrio parahaemolyticus Peru-466] gi|308094717|ref|ZP_05891469.2| metal-dependent hydrolase [Vibrio parahaemolyticus AN-5034] gi|308126490|ref|ZP_05910491.2| metal-dependent hydrolase [Vibrio parahaemolyticus AQ4037] gi|308088090|gb|EFO37785.1| metal-dependent hydrolase [Vibrio parahaemolyticus Peru-466] gi|308090251|gb|EFO39946.1| metal-dependent hydrolase [Vibrio parahaemolyticus AN-5034] gi|308109923|gb|EFO47463.1| metal-dependent hydrolase [Vibrio parahaemolyticus AQ4037] gi|308111792|gb|EFO49332.1| metal-dependent hydrolase [Vibrio parahaemolyticus K5030] Length = 288 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 72/312 (23%), Positives = 135/312 (43%), Gaps = 34/312 (10%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +R + + + + + L SWNI LS G V RT+ D+ L QY Sbjct: 1 MRSLFVTALLIFSSTSLAQ-NSINLTSWNIEWLSINGG------KVSRTSDDFVKLNQYV 53 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKN 120 ADI+ QE+ S AV K + + I+ S N+ + S+ + +T AVRK Sbjct: 54 DKTQADIIAFQEVDSKAAVQKAVG-DGYAIYLSDRAQSNNKHLQFSDTNQYTGFAVRKDI 112 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSP 179 + + + R A ++V + K ++ +L +HLK+ C S S Sbjct: 113 EVSDPADFSIT-----RGNSKLRFASYIVVNPSQKDELHLLSVHLKAGC---SGAYKNSR 164 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 C LSQQ + L W++++++ + + GDFN ++Y D W + + + Sbjct: 165 DCQTLSQQGEALAKWMSEREKKKEQYAVMGDFNHNLSYQ--RDWLWAIMTLGNDAQLVTR 222 Query: 240 EKDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + C N +K + + ID+ ++ + ++ + L++ D+ +LS Sbjct: 223 DTQADCKVRSNKNPSKTHQFRSLIDHIIVSPQ----IKAKNAHQTLFSSQDVLDY--KLS 276 Query: 294 DHCPI--SIDYD 303 DHCP+ ++ + Sbjct: 277 DHCPVNATVTLN 288 >gi|262395406|ref|YP_003287259.1| metal-dependent hydrolase [Vibrio sp. Ex25] gi|262339000|gb|ACY52794.1| metal-dependent hydrolase [Vibrio sp. Ex25] Length = 288 Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 72/312 (23%), Positives = 136/312 (43%), Gaps = 34/312 (10%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +R + + + + + L SWNI LS G V RT+ D+ L QY Sbjct: 1 MRSLFVTALLIFSSTSLAQ-NSINLTSWNIEWLSINGG------KVSRTSDDFIKLNQYV 53 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKN 120 ADI+ QE+ S AV K + + I+ S N+ + S+ + +T AVRK Sbjct: 54 DKTQADIIAFQEVDSKAAVQKAVG-DGYAIYLSDRAQSNNKHLQFSDTNQYTGFAVRKDI 112 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSP 179 + + + + R A ++V N K ++ +L +HLK+ C S + Sbjct: 113 EVSDPADFSITRS-----NSKLRFASYIVVNPNQKDELHLLSVHLKAGC---SGAYKNNR 164 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 +C LSQQ + L W++++++ + + GDFN ++Y D W + + + Sbjct: 165 NCQTLSQQGEALAKWMSEREKKKQQYAVMGDFNHNLSYQ--RDWLWAIMTLGNDAQLVTR 222 Query: 240 EKDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + C N K + + ID+ ++ + ++ + L++ D+ +LS Sbjct: 223 DTKADCKVRSNKNPRKTHQFRSLIDHIIVSPQ----IKAKNAHQTLFSSQDVLDY--KLS 276 Query: 294 DHCPI--SIDYD 303 DHCP+ ++ + Sbjct: 277 DHCPVNATVTLN 288 >gi|296115009|ref|ZP_06833653.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter hansenii ATCC 23769] gi|295978471|gb|EFG85205.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter hansenii ATCC 23769] Length = 293 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 80/306 (26%), Positives = 126/306 (41%), Gaps = 25/306 (8%) Query: 3 RKYVLALVFFLV---PCTASVAQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLL 57 R +V L+ + + A +RL +WN++ L +L + R +D L Sbjct: 6 RPFVFLLMVLITGGHMPMMAHAMPLRLSTWNLDWLTTRPAGDRALPDDVRPRDMADIVRL 65 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 +YA L DI L+E+ + A++FP + I S + TA+AVR Sbjct: 66 ARYAARLHPDIAALEEVDTPELAARLFPAPDYRILISGD----------GVVQKTALAVR 115 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + + + R +++ V + VL IHLK+ C + + Sbjct: 116 GGLIVTRHPDVRAIDVYPPDAPRHLRSGLDVTVGDGRASLRVLVIHLKAGCRDGAP-DDR 174 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 P+C L +Q L DWI ++++ PF I GDFN LG D + N L+ Sbjct: 175 RPACRTLYRQVAALTDWIMERQDEGEPFAIMGDFNH---MLGPGDAMLAMLGENGPLVAP 231 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 S C ID+ V+ A ++L +S + Y E D + RLSDHCP Sbjct: 232 TVGLASPCWGGNYF-----IDHIVLGDQARQWLHPDSLRVMTYREHD-PTLQSRLSDHCP 285 Query: 298 ISIDYD 303 +SI D Sbjct: 286 VSIGLD 291 >gi|27366781|ref|NP_762308.1| metal-dependent hydrolase [Vibrio vulnificus CMCP6] gi|27358348|gb|AAO07298.1|AE016809_60 Metal-dependent hydrolase [Vibrio vulnificus CMCP6] Length = 297 Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats. Identities = 66/313 (21%), Positives = 127/313 (40%), Gaps = 29/313 (9%) Query: 2 IRKYVLALVFF-----LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 + K+ L L F L+P AQ + SWN+ LS + ++ R D+ Sbjct: 1 MLKHTLGLFFTGLVYLLLPTPLLAAQPMTFTSWNMEWLSSTPSARVKES--HRNEEDFAK 58 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L Y + ++D++ QE+ A+ KV N +F + + + +T A+ Sbjct: 59 LAMYFQKTNSDVLAFQEVNDLAAIKKVVGTNYQILFSDRSNPRYQRFQFDDINQYTGFAI 118 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 +K L + + R A +++ ++ VL++HLK+ C S Sbjct: 119 KKGIPFRDVGDIQL-----NKGNSKLRFASYVIIGNTSNELHVLNVHLKAGC---SGAYK 170 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + +C L ++Q L WI+Q++ + +++ GDFN + Y ND + + Sbjct: 171 GNDACRTLRLESQALGQWISQRQSNKQTYLVLGDFNHNLAYR--NDWLMNELTSAGKIHL 228 Query: 237 FPKEKDSRCN------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 ++ + C NK + ID+ ++ + + L+ +D+ Sbjct: 229 LTEDTKANCKVRSKKQPNKVHSFRSLIDHIIVSEGLS----ASQAEQKLFTSNDVLKY-- 282 Query: 291 RLSDHCPISIDYD 303 +LSDHCP+S Sbjct: 283 QLSDHCPVSTTVT 295 >gi|295689871|ref|YP_003593564.1| endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] gi|295431774|gb|ADG10946.1| Endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] Length = 288 Score = 162 bits (408), Expect = 8e-38, Method: Composition-based stats. Identities = 81/309 (26%), Positives = 130/309 (42%), Gaps = 29/309 (9%) Query: 1 MIRKY---VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 M+ ++ V+AL + +A++ +R+ +WN+ LSE K RT +DY + Sbjct: 1 MLARFAALVVALFGLALSPSAALTAPLRVATWNMEHLSEDGA----KGCKPRTDADYETM 56 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN---DIHTAI 114 R+YA+ L+AD+V +E+ S A A+VF + + N Sbjct: 57 RRYAERLNADVVAFEEVESVKAAARVFDPAKYQLLIEARPAGNPFPCGEGRTLTRQAVGF 116 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSL 173 A+RK L D R V++ + G + +L +HLKS CF Sbjct: 117 AIRKGITVERAPDLTDLQLGDPN----LRGGVDVTIRAPGHAPLRLLAVHLKSGCFA--- 169 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + +C+ L +Q L+ WI + V F + GDFNR++ D W+ ID D Sbjct: 170 -GDAAKACATLMRQVPILERWIDARAAEGVRFAVLGDFNRRLARAD--DVVWREIDDADP 226 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + R ID+ V+D A + L E F E+ Y + G+R S Sbjct: 227 PNADLSLAEGSAGPKCDPRYSEFIDHIVLDARAARDL--EGFEELTY------AAGERGS 278 Query: 294 DHCPISIDY 302 DHCP+ Sbjct: 279 DHCPVLARL 287 >gi|320158664|ref|YP_004191042.1| metal-dependent hydrolase [Vibrio vulnificus MO6-24/O] gi|319933976|gb|ADV88839.1| metal-dependent hydrolase [Vibrio vulnificus MO6-24/O] Length = 297 Score = 162 bits (408), Expect = 8e-38, Method: Composition-based stats. Identities = 67/313 (21%), Positives = 127/313 (40%), Gaps = 29/313 (9%) Query: 2 IRKYVLALVFF-----LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 + K+ L L F L+P AQ + SWN+ LS + ++ R D+ Sbjct: 1 MLKHALGLFFTGLVYLLLPTPLLAAQPMTFTSWNMEWLSSTPSARVKES--HRNEEDFAK 58 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L Y + ++D++ QE+ A+ KV N +F + + + +T A+ Sbjct: 59 LAMYFQKTNSDVLAFQEVNDLAAIKKVVGTNYQILFSDRSNPRYQRFQFDDINQYTGFAI 118 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 +K L + + R A +++ +I VL++HLK+ C S Sbjct: 119 KKGIPFRDVGDIQL-----NKGNSKLRFASYVIIGNTSNEIHVLNVHLKAGC---SGAYK 170 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + +C L ++Q L WI+Q++ + +++ GDFN + Y ND + + Sbjct: 171 GNDACRTLRLESQALGQWISQRQNNKQNYLVLGDFNHNLAYR--NDWLMNELTSAGKIHL 228 Query: 237 FPKEKDSRCN------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 ++ + C NK + ID+ ++ + + L+ +D+ Sbjct: 229 LTEDTKANCKVRSKKQPNKVHSFRSLIDHIIVSEGLS----ASQAEQKLFTSNDVLKY-- 282 Query: 291 RLSDHCPISIDYD 303 +LSDHCP+S Sbjct: 283 QLSDHCPVSTTVT 295 >gi|153836873|ref|ZP_01989540.1| metal-dependent hydrolase [Vibrio parahaemolyticus AQ3810] gi|149749831|gb|EDM60576.1| metal-dependent hydrolase [Vibrio parahaemolyticus AQ3810] Length = 288 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 72/312 (23%), Positives = 134/312 (42%), Gaps = 34/312 (10%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +R + + + + + L SWNI LS G V RT+ D+ L QY Sbjct: 1 MRSLFVTALLIFSSTSLAQ-NSINLTSWNIEWLSINGG------KVSRTSDDFVKLNQYV 53 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKN 120 ADI+ QE+ S AV K + + I+ S N+ + S+ + +T AVRK Sbjct: 54 DKTQADIIAFQEVDSKAAVQKAVG-DGYAIYLSDRAQSNNKHLQFSDTNQYTGFAVRKDI 112 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSP 179 + + + R A ++V + K ++ +L +HLK+ C S S Sbjct: 113 EVSDPADFSIT-----RDNSKLRFASYIVVNPSQKDELHLLSVHLKAGC---SGAYKNSR 164 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 C LSQQ + L W++++++ + + GDFN ++Y D W + + + Sbjct: 165 DCQTLSQQGEALAKWMSEREKKKEQYAVMGDFNHNLSYQ--RDWLWAIMTLGNDAQLVTR 222 Query: 240 EKDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + C N +K + + ID+ ++ + ++ + L+ D+ +LS Sbjct: 223 DTQADCKVRSNKNPSKTHQFRSLIDHIIVSPQ----IKAKNAHQTLFISQDVLDY--KLS 276 Query: 294 DHCPI--SIDYD 303 DHCP+ ++ + Sbjct: 277 DHCPVNATVTLN 288 >gi|260777714|ref|ZP_05886607.1| hypothetical protein VIC_003111 [Vibrio coralliilyticus ATCC BAA-450] gi|260605727|gb|EEX32012.1| hypothetical protein VIC_003111 [Vibrio coralliilyticus ATCC BAA-450] Length = 296 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 64/307 (20%), Positives = 121/307 (39%), Gaps = 24/307 (7%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 K +LA++ + + + + +WN+ L+ + +R+ D+ L + Sbjct: 7 KAILAILLITKSTASFASSSLTVTAWNLEWLTSHPSDKF--SESQRSKQDFQALAGHFST 64 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 +D+D++ QE+ A+ KV + F ++ + + +T AV++ Sbjct: 65 IDSDVLAFQEVNDQQALHKVIGDDYRVYFSDRASDAYMKQQFDDINQYTGFAVKEDIEVA 124 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCS 182 + L D + R +++ NG + I L +HLK+ C S S C Sbjct: 125 DKPDIQL----DQRKNSKLRFGTYIVLNPNGSQPIHALSVHLKARC---SGAYKNSRDCK 177 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 +L Q + L WI++++ + I GDFN ++Y G D W+ I + + K Sbjct: 178 ILKSQGKVLNQWISERERQGQNYAILGDFNHNLSYNG--DWLWEVISHSSQAVLATKGTP 235 Query: 243 SRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + C N NK + + ID+ ++ + LSDHC Sbjct: 236 ATCKVRSRKNPNKTHQFRSLIDHIIVSPGLTTAQTNQDV------FPTSLVLQHHLSDHC 289 Query: 297 PISIDYD 303 PIS + Sbjct: 290 PISTQLN 296 >gi|71278943|ref|YP_268710.1| endonuclease/exonuclease/phosphatase family protein [Colwellia psychrerythraea 34H] gi|71144683|gb|AAZ25156.1| endonuclease/exonuclease/phosphatase family protein [Colwellia psychrerythraea 34H] Length = 301 Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 74/309 (23%), Positives = 131/309 (42%), Gaps = 49/309 (15%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + A+++++ SWNI L E RT +DY L +YAK L+AD++ LQE Sbjct: 16 FSSFKTQAEEIKVASWNIAWLGSHEY-------NHRTDADYKKLAKYAKQLNADVIALQE 68 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-KKNVRVLQQSYPLLG 132 + S KVF + + ++ST+ + +A++ ++ V + Y L Sbjct: 69 VESEYWARKVFGND-YDYYFSTKDWV----------QRVGVAIKKSQHFTVEAKEYKALD 117 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS--------------LENTYS 178 R +++ + NGK + +L +HLKS CF E Sbjct: 118 VG------KVRHGMDITLTKNGKTLHLLAVHLKSGCFAAPLDSSSVKAMPSTSIKEEKRK 171 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL-----GNNDDFWKTIDPND- 232 +C+ LS+Q L+ WI +++ GDFNR+ + + W+ ++ + Sbjct: 172 EACTKLSKQISPLEQWIDLHASQDAAYIVLGDFNRRFSQDIALKYSEDKGLWQALNDDGK 231 Query: 233 -SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 +L +S C ID+ + A + I+ SF ++++ K + Sbjct: 232 ETLWTPTMTANSGCWGGYYKEY---IDHIIFSPKAKEKYIESSFEQLIFKPKYTKELSRN 288 Query: 292 LSDHCPISI 300 LSDHCPIS+ Sbjct: 289 LSDHCPISV 297 >gi|254508339|ref|ZP_05120461.1| metal-dependent hydrolase [Vibrio parahaemolyticus 16] gi|219548753|gb|EED25756.1| metal-dependent hydrolase [Vibrio parahaemolyticus 16] Length = 295 Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 126/293 (43%), Gaps = 24/293 (8%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + + +WN+ LS ++ +R DY+ L + ++D+DIV QE+ Sbjct: 19 FSVHAEKTLNFSTWNLEWLSSTPSDKFPQS--QRLEKDYSALAAHFSSMDSDIVAFQEVN 76 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 A+ KV K F + + + + + + +T AVR+ + ++S L D Sbjct: 77 DEKALRKVIGKQYRVFFSTRRNPEHAAHQFTAINQYTGFAVREGISVIEKESLQL----D 132 Query: 136 SFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R+ R A +++ + I L +HLK+ C S ++ +C L +Q + L W Sbjct: 133 TSHRSKLRFASYVVISPTSDTPIHALSVHLKARC---SGAFRHNDACRTLKRQGEALNHW 189 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------NAN 248 I +++ ++I GDFN N D W+ + + + +E + C N + Sbjct: 190 IREREAHGERYMILGDFNH--NMSYPKDWLWEIVSQDSTAKLATRETKATCKVRSRNNPS 247 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 K + + ID+ + + Y DD+ +LSDHCPI++ Sbjct: 248 KTHQFRSLIDHVITSDQISV----SKIEQRNYKTDDLFRY--KLSDHCPITLT 294 >gi|90412878|ref|ZP_01220878.1| hypothetical protein P3TCK_26405 [Photobacterium profundum 3TCK] gi|90326237|gb|EAS42664.1| hypothetical protein P3TCK_26405 [Photobacterium profundum 3TCK] Length = 320 Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 76/309 (24%), Positives = 134/309 (43%), Gaps = 26/309 (8%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 F P + + + SWN+ L+ + + + +RT +DY L A LD DI+ Sbjct: 20 FAKPNVPPLTTTLTVASWNLQWLA-SDPIIIIPPPPQRTRADYQQLAHIATQLDTDILAF 78 Query: 72 QEMGSYNAVAKVFPKNTWCIFYS---TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 QE+ A+ KV + + +S E N+ + A+RK V Sbjct: 79 QEVADRQAIEKVLTNDEYVFEFSRRQQESQHNNKRHTKPWPQFVGFAIRKGISYVRNADL 138 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 L D R V++ + +GK + +L +HLKS C+ +C L++Q Sbjct: 139 HQL---DLRGNKSLRYGVDITLLNDGKAALRLLTVHLKSGCYSQQQSTKNR-ACRQLNRQ 194 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS----LIRFPKEKDS 243 + L+ W+ ++ +PF+I GDFNR++ +ND W+ +D L + + S Sbjct: 195 FEVLEQWVDRRAAEPLPFMILGDFNRRLTL--HNDQMWQQLDDGRPTGLSLYAATEGQKS 252 Query: 244 RCNANKN---------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 +C + ID+ V+D+ A + ++ SF E+ + + +K LSD Sbjct: 253 QCRIRIHSKHKKHRKIRHYPNFIDHIVLDERAKQKMVNNSFRELTSDVEVVK--AFNLSD 310 Query: 295 HCPISIDYD 303 HCPI++ Sbjct: 311 HCPITLSLS 319 >gi|261251117|ref|ZP_05943691.1| metal-dependent hydrolase [Vibrio orientalis CIP 102891] gi|260937990|gb|EEX93978.1| metal-dependent hydrolase [Vibrio orientalis CIP 102891] Length = 292 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 79/309 (25%), Positives = 130/309 (42%), Gaps = 25/309 (8%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M + + + V L+ S A + +WN+ LS + +R DY L + Sbjct: 1 MQKTWPIISVLALLGSFNSYADTL-YSAWNLEWLSSTPSSKFKPS--QRYDQDYQSLHHH 57 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 ++++DI+ QE+ A+ KV + F N + S+ + +T A+RK Sbjct: 58 FSSMESDILAFQEVNDKQALTKVIGSDYQFFFSHRSNADNQRHQFSDINQYTGFAIRKGI 117 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSP 179 L D + R A +++ N + I L +HLK+ C S S Sbjct: 118 AVKDMPDIKL----DRSPNSKLRFASYVMLHPNSQQPIHALSVHLKARC---SGAYNGSK 170 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 +C L Q Q L WI +++++ +VI GDFN ++Y G D WK I K Sbjct: 171 ACRTLKVQGQQLNKWIKEREKNNDAYVILGDFNHNLSYNG--DWLWKGISQGTDATLATK 228 Query: 240 EKDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + C N NK + K ID+ ++ + S + LY DD+ +++S Sbjct: 229 MTKANCKVKSRNNPNKTHQFKSLIDHIIVSSDLG----FHSPKQNLYKVDDVL--NRQMS 282 Query: 294 DHCPISIDY 302 DHCPIS+ Sbjct: 283 DHCPISVSI 291 >gi|323491827|ref|ZP_08097002.1| hypothetical protein VIBR0546_11562 [Vibrio brasiliensis LMG 20546] gi|323313962|gb|EGA67051.1| hypothetical protein VIBR0546_11562 [Vibrio brasiliensis LMG 20546] Length = 296 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 74/308 (24%), Positives = 129/308 (41%), Gaps = 24/308 (7%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 + + L A A+++ +WN+ LS +R+TSDY L + Sbjct: 5 KKWSFFTALCLLFSFHAVGAEQISFSTWNLEWLSSSPSSKF--EQSQRSTSDYQALNHHF 62 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 N+ +D+V QE+ +A+ KV + F N + + + +T AVR Sbjct: 63 SNMQSDVVAFQEVNDADALVKVIGNDYQLFFSQRSESDNRRHQFDDINQYTGFAVRNGIA 122 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPS 180 ++ L D+ S + R A +++ +GK + L +HLK+ C S S Sbjct: 123 VSNKRDLRL----DNSSNSKMRFASYIIIRPSGKQPVHALSVHLKARC---SGRFNSSRD 175 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 C +L QQ + L WI Q++ + ++I GDFN + Y D W I + K Sbjct: 176 CKILKQQGRALNGWIKQREAAKDAYIILGDFNHNMGYQ--RDWLWDEIAQDTQATLVSKS 233 Query: 241 KDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + C N K + + ID+ ++ ++ + +Y +D+ +LSD Sbjct: 234 TKAECKVRSRNNPRKTHQFRSLIDHIIVSESL----TASKPKQDVYPVEDVL--NHQLSD 287 Query: 295 HCPISIDY 302 HCP+S D Sbjct: 288 HCPLSSDI 295 >gi|258541736|ref|YP_003187169.1| hypothetical protein APA01_06400 [Acetobacter pasteurianus IFO 3283-01] gi|256632814|dbj|BAH98789.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01] gi|256635871|dbj|BAI01840.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03] gi|256638926|dbj|BAI04888.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07] gi|256641980|dbj|BAI07935.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22] gi|256645035|dbj|BAI10983.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26] gi|256648090|dbj|BAI14031.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32] gi|256651143|dbj|BAI17077.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654134|dbj|BAI20061.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12] Length = 321 Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats. Identities = 76/308 (24%), Positives = 130/308 (42%), Gaps = 32/308 (10%) Query: 4 KYVLALVFFLVPC----TASVAQKVRLVSWNINTL---SEQEGVSLWKNSVKRTTSDYTL 56 + + + + C +A+ A ++L +WN++ L + + RT++D + Sbjct: 26 SFFFSALVLVACCLSFTSATAADTLKLSTWNLDWLLDPAHPGYAQAPPDIPHRTSADISS 85 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L YA +L D+V LQE+ S ++FP + + S + HTA+AV Sbjct: 86 LASYAAHLHGDVVALQEIESPAGAGQLFPFARYHLAISQDH----------ILQHTALAV 135 Query: 117 RKKNVRVLQQSYPLLG--AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 R L A + R +++ + NG+ + +L +HLK+ C D+L Sbjct: 136 RADIPFEQNPDVTALDAYATAPTTHHHLRSGLDITLHQNGQALRILVVHLKAGC-PDNLP 194 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + P+C+ L QQ L DW+ + + F I GDFNR + +D + T+ L Sbjct: 195 HASRPACTTLWQQFAALDDWVATRTQHHEAFAIMGDFNRHLT---VHDPLFLTLLRIAPL 251 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 S C ID+ ++ A + + S I E+ G+ LSD Sbjct: 252 DLATAGMASPCQGGSYF-----IDHIILGGAARAWKVPNSLRVIPLAEET----GQNLSD 302 Query: 295 HCPISIDY 302 HCP+SI Sbjct: 303 HCPVSISL 310 >gi|114798114|ref|YP_760171.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas neptunium ATCC 15444] gi|114738288|gb|ABI76413.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas neptunium ATCC 15444] Length = 442 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 73/313 (23%), Positives = 113/313 (36%), Gaps = 35/313 (11%) Query: 3 RKYVLALVFFLVPCTASV-------AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55 R VLA + C A +R+ +WN L+ G + R + Sbjct: 150 RILVLATALLVSACQTPAPPPADQEAGPLRIAAWNTEHLTAVSGAGCFP----RDEAALD 205 Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPK------NTWCIFYSTERLINHSKRDSNND 109 L+ Y +DADI LQE+ A+A+VF + Sbjct: 206 LIADYITRVDADIWLLQEVDGDGALARVFGDGWTFHVEQRAGGETYPLCRGRDDGTRLRA 265 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 +TAIAVR P L A D R V + + ++ +HL S CF Sbjct: 266 QNTAIAVRDGI---THDRLPDLAALDLTGEGRTRYGVAITL-PGPVPTDIMSVHLTSGCF 321 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 C L QA L+ WI Q+ + ++ GDFNR++ +D W ++ Sbjct: 322 SGDTSVR----CPALFDQADVLEAWIDQRSAAGRAVIVGGDFNRRL--EAEDDPVWTGLN 375 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + + R + ID+ ++ A ++ SF E Y+ Sbjct: 376 DGTPAGL--HIAGAGTGPSCDPRYREFIDFLLLSDTALTRMVAGSFRETTYDTP------ 427 Query: 290 KRLSDHCPISIDY 302 R SDHCPIS+ Sbjct: 428 ARPSDHCPISLSI 440 >gi|109896633|ref|YP_659888.1| endonuclease/exonuclease/phosphatase [Pseudoalteromonas atlantica T6c] gi|109698914|gb|ABG38834.1| Endonuclease/exonuclease/phosphatase [Pseudoalteromonas atlantica T6c] Length = 331 Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats. Identities = 66/287 (22%), Positives = 117/287 (40%), Gaps = 22/287 (7%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 S ++V+WN + RT+ D ++ Y L A ++ LQE+ S Sbjct: 60 TSGMDGFKVVTWNTEHFA----YPSNAGCKPRTSEDIAAIKAYIAGLGASVIALQEVASR 115 Query: 78 NAVAKVFPKNTWCIFYSTERLIN----HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 A+ VFP++ W + S ++ A A++K + Q LG Sbjct: 116 EALRLVFPESDWTLVLSARADSPAYECRESGFTSTQQKVAFAIKKGISILQVQQNAQLGL 175 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + + G R + + V+ +L++HLKS CF+D + +C L+QQ L++ Sbjct: 176 Q----KIGLRFGLAVTVDTPLGPTDILNVHLKSGCFVDDYATSDKAACQTLAQQVPVLEE 231 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 W+ + VP+++ GDFN ++ N+ + ++ I + C+ R Sbjct: 232 WLAAHQTLGVPYMVLGDFNHRLAS--ENNYLASRLTSDEYGIDIATQALRGCHP----RY 285 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 PID+ ++ LI S Y LSDHC +S+ Sbjct: 286 PEPIDHILL-GGMQSTLIAASAHVHRYKN---MDEEAMLSDHCAVSL 328 >gi|114328405|ref|YP_745562.1| hypothetical protein GbCGDNIH1_1741 [Granulibacter bethesdensis CGDNIH1] gi|114316579|gb|ABI62639.1| hypothetical protein GbCGDNIH1_1741 [Granulibacter bethesdensis CGDNIH1] Length = 358 Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats. Identities = 74/319 (23%), Positives = 132/319 (41%), Gaps = 47/319 (14%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 P T +A +++ +WN++ L+E +L ++ RT D + L YA LDADI+ + Sbjct: 52 ASPVTTPLAGGLKIATWNLDWLTEPGSEATLPPDAPHRTEKDISRLSHYATLLDADIIAV 111 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 QE+ S + + ++FP + + I S +++ AVR+ + L Sbjct: 112 QEVASPDILRRLFPPDRYVIHLSGDKVA----------QRVGFAVRRGLMVTANPDLSGL 161 Query: 132 GAKDSFSRAGNRRAVELLVEIN----GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 + R ++ V++ G ++ +L +HLK+ C D+ + P+C+ L Q Sbjct: 162 DVYGPHAAHHLRSGADITVDLPASSGGGRLRLLAVHLKAGCRRDAFAKSLRPACATLQAQ 221 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 L WI ++K+ VPF+I GDFNR ++ DD + ++ L + C+ Sbjct: 222 TIPLTGWIAERKQEGVPFLILGDFNRWLH---PGDDVLQKMEQVAPLTLLTVNRRDPCHH 278 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI---------------------- 285 + ID+ + A ++ ES + Y Sbjct: 279 GASF-----IDHILAGGVARSWIDPESLRVMTYGPATTSKPEGQAMRYQLPWTRMPPGKL 333 Query: 286 --KSRGKRLSDHCPISIDY 302 LSDHCP+SI Sbjct: 334 IQPDSSDGLSDHCPVSIRL 352 >gi|330993334|ref|ZP_08317269.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter sp. SXCC-1] gi|329759364|gb|EGG75873.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter sp. SXCC-1] Length = 283 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 77/299 (25%), Positives = 134/299 (44%), Gaps = 22/299 (7%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 L ++ L+P TA + +RL +WN+ L Q +L + RT + L YA+ L Sbjct: 3 LPVITGLLPATAGAREDIRLSTWNLEWLTTRPQGDPALPADVTPRTVVELEHLAAYARRL 62 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 DI L+E+ S A++FP + IF + + ++ A+AVR + Sbjct: 63 APDIAALEEVDSPALAARLFPAPAYRIFITHDTVV----------QKVALAVRAELAVTR 112 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 L + R +++ + + VL +HLK+ C DS ++ P+C L Sbjct: 113 HADVTALDVYAPDAPHHLRAGLDVSIGTGADSLRVLVVHLKAGCR-DSAPDSRRPACRTL 171 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 +Q + DWI ++++ F + GDFNR + +D + T+ + L + S Sbjct: 172 LRQIAIVADWILERQDEGEAFAVLGDFNRLLA---PDDPAFHTLAASGPLALVTAGRASP 228 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 C ID+ ++ AY + +S +LY+ED + RLSDHCP+S++ Sbjct: 229 CAQGSYF-----IDHILVGGPAYARVRPDSLRVMLYHEDSG-TEASRLSDHCPVSVNLS 281 >gi|312883334|ref|ZP_07743060.1| Endonuclease/Exonuclease/phosphatase family protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309368950|gb|EFP96476.1| Endonuclease/Exonuclease/phosphatase family protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 303 Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 68/312 (21%), Positives = 130/312 (41%), Gaps = 25/312 (8%) Query: 1 MIRKY-VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 M RK VL +F + S A+ +R +WN+ L+ + L S R SD LLR+ Sbjct: 1 MPRKIKVLFYLFVGLIACESQAEVIRYTTWNLQWLATPQHGKLI--SPNRGGSDLRLLRK 58 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 Y ADI+ QE+ + ++KV + I + N + S+ + +T AV+K Sbjct: 59 YFIKTSADIMAFQEVNDVSIISKVVGSDYKVILSQRSKAENQIHQFSDINQYTGFAVKKS 118 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYS 178 + L D ++ R A + + + + +L +HLK+ C + Sbjct: 119 FKVRDHKDIQL----DKRLKSRLRFASYIELTTPSKQSVHLLSVHLKAGCRKN---YQEK 171 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 +C +L +Q + WI ++++ +++ GDFN +I W I + Sbjct: 172 RNCRILKEQLININSWIREREKYQHDYIVLGDFNSQI--ADEAKWAWYLISKKTQAVLTS 229 Query: 239 KEKDSRCNANKN------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + ++C + K ID+ ++ + + ++ + D++ L Sbjct: 230 QNTTAQCYVRSKTKRASVFKYKSIIDHIIVSSSH----TFTTAKQLPFKTKDVRQYE--L 283 Query: 293 SDHCPISIDYDF 304 SDHCP+ I+ + Sbjct: 284 SDHCPVIIEASY 295 >gi|260773808|ref|ZP_05882723.1| hypothetical protein VIB_002285 [Vibrio metschnikovii CIP 69.14] gi|260610769|gb|EEX35973.1| hypothetical protein VIB_002285 [Vibrio metschnikovii CIP 69.14] Length = 299 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 74/310 (23%), Positives = 136/310 (43%), Gaps = 29/310 (9%) Query: 1 MIRKYV--LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 MI +++ L L L+ AQ + + +WNI L+ + KR+ +D+ L Sbjct: 1 MITRFLSRLTLCVVLLSSFCGYAQPISITTWNIEWLTLNPDA--PDDKGKRSEADFQALS 58 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH-SKRDSNNDIHTAIAVR 117 ++ + D++ QE+ S A+ KV N + I S + H + S + +T A++ Sbjct: 59 RHFQRFRPDVLAFQEVDSIAAIQKVVG-NEYRIVLSERAMPQHQQHQFSKLNQYTGFAIK 117 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENT 176 L G + R A +++ + +I +L +HLK+ C + Sbjct: 118 STIPFDTPADIDLYG----RANHKLRFATYVILYPDNPNEIHLLSVHLKAGCAG--AFHP 171 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSL 234 + SC +L Q + L W+ +++ F+I GDFN + Y G D WK I+ N + Sbjct: 172 NTDSCQILKTQGKALNRWLQERERHQHAFMILGDFNHNLAYQG--DWLWKIINQELNKPV 229 Query: 235 IRFPKEKDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 +E +RC + R + ID+ ++ ++ + +I++ D++ Sbjct: 230 QLATQETPARCQVRSRRQPDTLHRFRSLIDHMIVS----SQVVYQQIQQIVFPADEVLRY 285 Query: 289 GKRLSDHCPI 298 RLSDHCPI Sbjct: 286 --RLSDHCPI 293 >gi|163804004|ref|ZP_02197820.1| hypothetical protein 1103602000450_AND4_08521 [Vibrio sp. AND4] gi|159172186|gb|EDP57103.1| hypothetical protein AND4_08521 [Vibrio sp. AND4] Length = 261 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 63/283 (22%), Positives = 113/283 (39%), Gaps = 29/283 (10%) Query: 29 WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNT 88 WN+ LS L RT+ D+ L Y ADI+ QE+ S A+ K + Sbjct: 1 WNMEWLSIDGSKVL------RTSQDFEKLSYYMAKTQADILAFQEVESITAIQKAVGNDF 54 Query: 89 WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148 + ++ + +T AVR + + + + R A L Sbjct: 55 TIYLSDRSNSSYRHLQFNDTNQYTGFAVRNGVNVLDK-----PDFSITRGNSKLRFASYL 109 Query: 149 LVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207 ++ N +I +L +HLK+ C + C ++ QQ Q L W+ ++++ +V+ Sbjct: 110 VLNPNQDNEIHLLSVHLKAGCSGT---YRNNRDCKIVKQQGQALAKWMKAREDNKQHYVV 166 Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------NANKNLRNKIPIDYFV 261 GDFN + Y G D W+ + + K+ ++C N NK + + ID+ + Sbjct: 167 LGDFNHNLGYRG--DWLWRVLSDDTDAKLMTKDTQAQCKVRSNRNPNKTHQFRSMIDHII 224 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + ++ D+ +LSDHCP+S F Sbjct: 225 VSGQLM----ASPSVQTVFKTQDVLDY--KLSDHCPVSSVLSF 261 >gi|54309887|ref|YP_130907.1| hypothetical protein PBPRA2733 [Photobacterium profundum SS9] gi|46914326|emb|CAG21105.1| hypothetical protein PBPRA2733 [Photobacterium profundum SS9] Length = 319 Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 74/327 (22%), Positives = 135/327 (41%), Gaps = 35/327 (10%) Query: 3 RKYVLALVFFLVPCTASVA---------QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD 53 +++ L + + + + SWN+ LS + + + +RT D Sbjct: 1 MQWLFPLFLISALTLVNGSFSKPNIHTVNTLTIASWNLQWLS-SDPIVIKNPPPQRTHVD 59 Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER---LINHSKRDSNNDI 110 Y L A LDADI+ QE+ A++KV + + +S + + + Sbjct: 60 YQQLANIATQLDADILAFQEVADRQAISKVLTNDEYIFEFSHRQRESQHSDKRYAQPWPQ 119 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCF 169 A+R+ V L D + R V++ + +G + +L +HLKS C+ Sbjct: 120 FVGFAIREGISYVRNADLQQL---DLWGNKSLRYGVDITLLNDGNPALRLLTVHLKSGCY 176 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 +C L++Q + L+ W+ ++ +PF+I GDFNR++ +ND W+ +D Sbjct: 177 SQQQSTKNR-ACRHLNRQFEVLEQWVDRRAAEPLPFMILGDFNRRLAL--HNDKIWQQLD 233 Query: 230 PNDS----LIRFPKEKDSRCN---------ANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 L + + S+C + ID+ V+D A +I SF Sbjct: 234 DGRPTGLSLYAATEGQKSQCRIKIHSKRKKHGQIRHYPNFIDHIVLDGRAKLKMINNSFR 293 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303 E + + +K LSDHCPI++ + Sbjct: 294 ETTTDVEVVK--AFNLSDHCPIALSLN 318 >gi|149190193|ref|ZP_01868468.1| hypothetical protein VSAK1_14887 [Vibrio shilonii AK1] gi|148835940|gb|EDL52902.1| hypothetical protein VSAK1_14887 [Vibrio shilonii AK1] Length = 301 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 71/317 (22%), Positives = 130/317 (41%), Gaps = 37/317 (11%) Query: 1 MIR-----KYVLALVF-FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54 M R K++ +LV + T A +WNI L+ + +R D+ Sbjct: 5 MKRTLSYYKWLFSLVIGISLFPTLVSATTFT--TWNIEWLTLNPSSKF--EASQRGKDDF 60 Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH-SKRDSNNDIHTA 113 L + + L ++ QE+ S A+ K+ + + I+ S L + + S + +T Sbjct: 61 LALARQFEVLSPSVLAFQEVDSQEAIRKIVGND-YDIYLSDRALPSSKQHQFSAINQYTG 119 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 AV+K +PL R A + + ++ K I +L +HLK+ C S Sbjct: 120 FAVKKGLSIKDAADFPLSTGS------KLRFASAIKLNVDNKTINLLSVHLKAGC---SG 170 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + SC L +Q + + W+ Q ++ +++ GDFN + Y G D WKTI Sbjct: 171 KFVNQNSCHTLKKQGKVINSWLKQVEQQNELYIVLGDFNHNLAYSG--DWLWKTITNGLD 228 Query: 234 L--IRFPKEKDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 ++ + C N +K + + ID+ ++ + L +D+ Sbjct: 229 TAPRLTSQQTKATCKVKSRKNNDKIHQFRSLIDHIIVSPELR----TSPAVQSLMPVEDV 284 Query: 286 KSRGKRLSDHCPISIDY 302 ++SDHCP+SI+ Sbjct: 285 LK--HQMSDHCPLSIEL 299 >gi|90578074|ref|ZP_01233885.1| hypothetical protein VAS14_13524 [Vibrio angustum S14] gi|90441160|gb|EAS66340.1| hypothetical protein VAS14_13524 [Vibrio angustum S14] Length = 287 Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats. Identities = 79/294 (26%), Positives = 133/294 (45%), Gaps = 29/294 (9%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 +SWN+ LSEQ+ VKRT DYT+L+Q + DI+ QE+ S ++ ++ P Sbjct: 1 MSWNLQWLSEQQQE------VKRTEQDYTMLKQVFLTYEPDILAFQEVDSAASLQRIVPN 54 Query: 87 NTWCIFYSTERLINHSKRDSNNDIHTAIAVR-----KKNVRVLQQSYPLLG-AKDSFSRA 140 + + IF S+ R+ N + + T AV+ KK+ + S P L + + + Sbjct: 55 DQYQIFMSS-RIKNKEDIFNGVNQFTGFAVKNYLTVKKHPDITTLSSPALALGEKQYYQQ 113 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCF-LDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + V +N I V+++HLKS CF L+N SC L+ Q L+ WI Q++ Sbjct: 114 KLRYGSAITVSLNQHDIIVVNVHLKSGCFTPKQLKNNRKKSCRTLNFQRTLLQQWIKQQQ 173 Query: 200 ESLVPFVIAGDFNRKINYLGNNDD--FWKTIDPNDSLIRFPKEKDSRCNAN-------KN 250 + PF++ GDFN I + N+ F+ + + L C Sbjct: 174 INKQPFILVGDFNHHIAFKTTNNATNFFSSNNKQGPLKWLTNNVKGNCLTKKIKNKKVYY 233 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 K ID+ ++ S ++ Y+++ + + +LSDHCP+ F Sbjct: 234 RHYKELIDHGFSSEHFNI----TSVQQLPYSKEQVSTY--QLSDHCPVIFSLSF 281 >gi|88860700|ref|ZP_01135337.1| hypothetical protein PTD2_05565 [Pseudoalteromonas tunicata D2] gi|88817295|gb|EAR27113.1| hypothetical protein PTD2_05565 [Pseudoalteromonas tunicata D2] Length = 316 Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats. Identities = 72/289 (24%), Positives = 125/289 (43%), Gaps = 19/289 (6%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A + +WN+ L+ R+ S+ ++ YA +LDADI+ LQE+ S Sbjct: 40 APSINALSFATWNMEHLA----YPADTGCKPRSKSEIAAMQAYAASLDADIIALQEVASV 95 Query: 78 NAVAKVFPKNTWCIFYSTER----LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 A+A+VFP++ W I S +++ A AVRK + Y L Sbjct: 96 KAIAQVFPEDQWQIIISKRADSEVYSCRESGNTSTQQKVAFAVRKSIPVLNTHHYDELAL 155 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + G R + + V+ VL++HLKS CF+D E + +C ++QA WL Sbjct: 156 GLN----GLRYGLSVTVDTADGATEVLNVHLKSGCFVDDYEKSDRKACPTFAKQAVWLDK 211 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 W +K+ S P+++ GDFN ++ N+ + + N + + ++ + + R Sbjct: 212 WFERKEASKQPYIVMGDFNHRLATD--NNRLMQELANNSNGAASTLKHITQNVVSCHPRY 269 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 PID+ + I + + + KS LSDHC ++ Sbjct: 270 PAPIDHQFAGG--FSQAIPTNVQMRYFAD---KSETAMLSDHCAVTFTL 313 >gi|221134816|ref|ZP_03561119.1| endonuclease/exonuclease/phosphatase [Glaciecola sp. HTCC2999] Length = 321 Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats. Identities = 66/292 (22%), Positives = 120/292 (41%), Gaps = 22/292 (7%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + ++ + +WN+ L+ + RT SD +R+Y N+DAD+ LQE+ S Sbjct: 45 SFEPSQLTVATWNVEHLA----YPINTGCKPRTESDINAMREYVNNVDADVFALQEVASE 100 Query: 78 NAVAKVFPKNTWCIFYSTER----LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 AV +FP +TW + S + A AV+ + LG Sbjct: 101 QAVRLLFPTDTWQVLMSPRPDSETYECRGSGRESTQQKIAYAVKNGININSVKGLSELG- 159 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + G R +EL ++ I +L++H+KS CF+D+ + SC +QQA L Sbjct: 160 ---LNNPGLRYGLELTIQSELGAIKLLNVHMKSGCFVDNYSRSDRESCQTFAQQAPILDA 216 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 W+ ++ + +V+ GDFN +++ N+ D ++S + + C+ Sbjct: 217 WVETQESEDIQYVLLGDFNHRLSAPYNHLTRQLMTNSDGSESTLYNTTGQLIGCHPY--- 273 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 PID + + + + + LSDHC +S+ + Sbjct: 274 -YPAPIDLVFVGGMSDNKYD----YTYQAHTFNNMAPKAMLSDHCAVSLQIE 320 >gi|197337596|ref|YP_002157871.1| metal-dependent hydrolase [Vibrio fischeri MJ11] gi|197314848|gb|ACH64297.1| metal-dependent hydrolase [Vibrio fischeri MJ11] Length = 323 Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats. Identities = 67/314 (21%), Positives = 129/314 (41%), Gaps = 29/314 (9%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M ++ L+F ++ + + + L +WN+ L+ S R+ D+ L Y Sbjct: 27 MNQRITRTLIFLMLTFSTFSSYAITLSTWNMEWLTLSPSEKF--RSSDRSQQDFEQLNFY 84 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 ++ I+ QE+ S A+ ++ + + I+ S R +N + ++ + +T AV + Sbjct: 85 FSQSNSKILAFQEVDSKEAIQRIVGND-YKIYLSD-RSLNSKLQFTDINQYTGFAVHQSI 142 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYS 178 + + LL K + + R A ++ +I + + +L +HLKS C + Sbjct: 143 PVIDPNDFSLLPKKKT---SKLRYATYIVADIGNPSRPVHLLSVHLKSGCLGQ---KKKN 196 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI--R 236 SCS L QQ + +WI ++ + ++I GDFN + + WK I N S Sbjct: 197 YSCSTLKQQTDEVIEWINSREANNEEYLILGDFNHTLAH--PRSWLWKNIKSNTSDTPLL 254 Query: 237 FPKEKDSRC----NANKNLRN---KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 ++ +RC + ID+ + SF + + Sbjct: 255 LTEDTKARCTVKQWKRDWPKYTTFTRLIDH------GITNISNRSFQVTQQQFTEADVKK 308 Query: 290 KRLSDHCPISIDYD 303 +LSDHCPI + + Sbjct: 309 YQLSDHCPILFEMN 322 >gi|59713463|ref|YP_206238.1| hypothetical protein VF_A0280 [Vibrio fischeri ES114] gi|59481711|gb|AAW87350.1| hypothetical protein VF_A0280 [Vibrio fischeri ES114] Length = 323 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 65/312 (20%), Positives = 130/312 (41%), Gaps = 25/312 (8%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M ++ L+F ++ + + + L +WN+ L+ S R+ D+ L Y Sbjct: 27 MNQRITRTLIFLMLTFSTFSSYAITLSTWNMEWLTLSPSEKF--RSSDRSQQDFEQLNFY 84 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 ++ I+ QE+ S A+ K+ + + IF S R +N + ++ + +T AV + Sbjct: 85 FSQSNSKILAFQEVDSKEAIQKIVGND-YKIFISD-RSLNSKLQFTDINQYTGFAVHQSI 142 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYS 178 + + LL K + + R A ++ +I + + +L +HLKS C + Sbjct: 143 PVIDPNDFSLLPKKKT---SKLRYATYIVADIGKPSRPVHLLSVHLKSGCLGQ---KKKN 196 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 SCS L QQ + +WI ++ + ++I GDFN + + + + +D+ + Sbjct: 197 YSCSTLKQQTDEVIEWINSREANNEEYLILGDFNHTLAHPRSWLWKNIKNNTSDTPLLLT 256 Query: 239 KEKDSRC----NANKNLRN---KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 ++ +RC + ID+ + SF + + + Sbjct: 257 EDTKARCTVKQWKRDWPKYTTFTRLIDH------GITNISNRSFQVTQQQFIESDVKKYQ 310 Query: 292 LSDHCPISIDYD 303 LSDHCPI + + Sbjct: 311 LSDHCPILFEMN 322 >gi|209809561|ref|YP_002265100.1| membrane protein [Aliivibrio salmonicida LFI1238] gi|208011124|emb|CAQ81546.1| membrane protein [Aliivibrio salmonicida LFI1238] Length = 321 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 75/311 (24%), Positives = 134/311 (43%), Gaps = 27/311 (8%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M ++ L F+++ ++ + V L +WN+ L+ + +R D+ L Y Sbjct: 27 MNQRITRLLSFYMLIFSSFSSYAVTLSTWNMEWLTLNPSEKFKPS--ERNEYDFRSLNNY 84 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 ++ I+ QE+ S A+ KV N + I+ S R N K+ ++ + +T AV Sbjct: 85 FIKSNSQILAFQEVDSAEAIQKVVG-NEYKIYLSD-RSSNPKKQFNDINQYTGFAVHNSI 142 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + LL K + + R A ++ +N K + +L +HLKS CF + + Sbjct: 143 SVTDPDDFSLLPDKKT---SKLRYAAYIIATVNEKPLHLLSVHLKSGCFGQ---KKKNYA 196 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI--RFP 238 CS L QQ + + DWI ++ E ++I GDFN + + WK I Sbjct: 197 CSTLEQQTEEVIDWINERNEKKQDYLILGDFNHTLAH--PRSWVWKEIQKGTPQDPYLLT 254 Query: 239 KEKDSRCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 ++ C + RN ID+ + L + ++LY+++D+K + Sbjct: 255 EDTKGNCTVKQWKRNWPKYTTFTRLIDH----GISNLSLKKVEVEQLLYDQNDVKK--FQ 308 Query: 292 LSDHCPISIDY 302 L+DHCPI Sbjct: 309 LTDHCPIIFKI 319 >gi|262195540|ref|YP_003266749.1| endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM 14365] gi|262078887|gb|ACY14856.1| Endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM 14365] Length = 406 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 38/291 (13%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + L +WN++ L+ ++G + RT +DY LR YA LDAD++ LQE+ A Sbjct: 41 GDIELATWNLSWLASEDGA----GTNPRTEADYARLRTYAARLDADVIALQEVADEFAAR 96 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +VF + +++R + A ++ L G Sbjct: 97 RVFDPTVYDFAIASKR----------GAQRSGFAYKRDLRVRRHADLAALDVG------G 140 Query: 142 NRRAVELLVEINGK------KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R V++ +++ ++ +L +HLKS CF DSL S +C LS+Q L+ WI Sbjct: 141 LRPGVDIELDLGRGADGTPRRLRLLALHLKSGCFDDSL-RKRSNACRKLSRQLPQLEGWI 199 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL----IRFPKEKDSRCNANKNL 251 + VPF + GDFNR++N D W+ ID + + + SRC K Sbjct: 200 DARAREGVPFAVLGDFNRRMNA---RDALWREIDDAEPAAADLTLVTEGQRSRCWKGKYP 256 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R ID+ +D +A +L+ SF +++Y++ D + + LSDHCPIS+ Sbjct: 257 RF---IDHIALDLHASAWLVPNSFEQLVYSDSDT-AHARALSDHCPISVRL 303 >gi|317495840|ref|ZP_07954203.1| endonuclease/Exonuclease/phosphatase [Gemella moribillum M424] gi|316914017|gb|EFV35500.1| endonuclease/Exonuclease/phosphatase [Gemella moribillum M424] Length = 696 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 97/329 (29%), Gaps = 58/329 (17%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFLQEMGS 76 K+ + S+NI S + + K DI+ L E+ Sbjct: 312 PSEDKLTIASYNIENFSANNNGHDETP-----EEKVDKIANSFIKEVHSPDIITLIEVQD 366 Query: 77 YNA------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N K + + + +I A Sbjct: 367 NNGGVNDGTVDGVKSGEKLAQRIKQLGGPEYK-YTEIAPVDGKDGGKPGANIRVAYLYNP 425 Query: 119 KNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 K V ++ + P + R+++ E G++I V+ Sbjct: 426 KRVTLVGKDKGGSEEAARFVNGHLEKNPARIDPTNVHFDKVRKSLAAEFEFKGERIVVIA 485 Query: 162 IHLKSFCFLDSLENTYSPSCS----LLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215 HLKS D++ + PS ++A+ L +I + ++ + FV+ GDFN Sbjct: 486 NHLKSKIGDDAIYGSNQPSVENTKSKRIEEAKILNAFIKEGLRQNPNLKFVLTGDFNDFE 545 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 KTI N+ + + + + +D ++ +N ++ Sbjct: 546 FSDSV-----KTIVGNELVNLMAEHDAGDRYSYFYRGSNQSLDNILVSKNIKDKVVFSPV 600 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + DF Sbjct: 601 HI----NASFMEEHGRASDHDPVVVQIDF 625 >gi|330448573|ref|ZP_08312221.1| endonuclease/Exonuclease/phosphatase family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492764|dbj|GAA06718.1| endonuclease/Exonuclease/phosphatase family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 283 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 124/291 (42%), Gaps = 26/291 (8%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 ++WN L++ + +RT DY LRQ D++ QE+ S ++ +V PK Sbjct: 1 MTWNFQWLADHPKSDI-----QRTAKDYQALRQIFLTHQPDVLAFQEVNSAKSLYRVIPK 55 Query: 87 NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK------DSFSRA 140 + + +F S+ R I+ + + + T AV+K L + S + Sbjct: 56 DQYQVFMSS-RTISEDDKFNGINQFTGFAVKKPIYAKQLNDISELSSPAASLGLTSHYQQ 114 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCF-LDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + ++++ I + ++HLKS CF L + +C L+ Q + ++ W+ ++ Sbjct: 115 KLRYGAVISIKLDDNAITIANLHLKSGCFYPKQLSHNKKKACRTLNLQRKIVQQWVNNQQ 174 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-------NANKNLR 252 VPF++ GDFN +I+ + D+ + + N L + + C N + Sbjct: 175 TKQVPFIVVGDFNHRIHQPPSIDNGFISSSANKPLKWLSQNINGSCLAKVTKNNRVYYRQ 234 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K ID+ I S +I + + + +LSDHCP+ + Sbjct: 235 YKQLIDHGFSS----VHFILNSAQQIQFAKHQV--EQYQLSDHCPLLFNLT 279 >gi|329770281|ref|ZP_08261669.1| hypothetical protein HMPREF0433_01433 [Gemella sanguinis M325] gi|328836839|gb|EGF86487.1| hypothetical protein HMPREF0433_01433 [Gemella sanguinis M325] Length = 719 Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 50/329 (15%), Positives = 102/329 (31%), Gaps = 58/329 (17%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFLQEMGS 76 K+ + S+NI S K + + + + DI+ L E+ Sbjct: 321 PAEDKLTIASYNIENFSANS-----KGRDETPEEKVDKIAKSFINEVHSPDIITLIEVQD 375 Query: 77 YN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N K F + + + +I A Sbjct: 376 NNGGVNDGTVEGVKSGEKLADRIKSFGGPEYK-YTEVAPIDGKDGGKPGANIRVAYLYNP 434 Query: 119 KNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 V ++ + P + + R+++ + G++I V+ Sbjct: 435 NRVTLIGKDKGGSEEAARFVDGHLEKNPARIDPTNINFEKVRKSLAAEFDFKGERIVVIA 494 Query: 162 IHLKSFCFLDSLENTYSPSCS----LLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215 HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GDFN Sbjct: 495 NHLKSKLGDDAVYGSNQPAIENTKAQRVEQAKLLNAFVREGLRQNPNLKFVLTGDFNDF- 553 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 D KTI N+ + + + + + +D ++ +N ++ Sbjct: 554 ----EFSDTVKTIVGNELVNLMAEHEAGDRYSYFYRGSNQSLDNILVSKNIKDRVLFSPV 609 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + DF Sbjct: 610 HI----NASFMEEHGRASDHDPVVVQIDF 634 >gi|125718549|ref|YP_001035682.1| extracellular nuclease [Streptococcus sanguinis SK36] gi|125498466|gb|ABN45132.1| Extracellular nuclease, putative [Streptococcus sanguinis SK36] Length = 749 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 101/334 (30%), Gaps = 59/334 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71 V K+ + S+NI S T + + DI+ L Sbjct: 348 VSPIYPSEDKLTVASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401 Query: 72 QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ N A K T+ + L ++I A Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460 Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 V+++++ P + + R+++ E G+ Sbjct: 461 FLYNPNRVKLVEKDAGNSDEAASFSGGHLVKNPARIEPTNPAFTKVRKSLAAEFEFKGQH 520 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210 I V+ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GD Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + K + N+ + + + + + +D + +N Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R SDH P+ + DF Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|315221940|ref|ZP_07863851.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus anginosus F0211] gi|315188906|gb|EFU22610.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus anginosus F0211] Length = 736 Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats. Identities = 48/329 (14%), Positives = 99/329 (30%), Gaps = 59/329 (17%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFLQEMGS 76 K+ + S+NI S + + + + + DI+ L E+ Sbjct: 357 PSEDKLTIASYNIENFSANNATGETPD------AKVEKIAKSFINEIHSPDIITLIEVQD 410 Query: 77 YN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N A K + + ++I A Sbjct: 411 NNGSVNDGTVSGVESGEKLAAKIKQLGGKEYKYVEVA-PVDGADGGKPGSNIRVAFLYNP 469 Query: 119 KNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 + V+++++ P + R+++ E G++I V+ Sbjct: 470 QRVKLVEREAGSSTETAAFKDGHLVKNPARIDPANPVFEKVRKSLAAEFEFKGERIVVIA 529 Query: 162 IHLKSFCFLDSLENTYSPSCS----LLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215 HLKS D++ + P+ +QA+ L ++ + K+ + FV+ GDFN Sbjct: 530 NHLKSKLGDDAVYGSKQPAVQNTLAQRIEQAKLLNAFVKEGLKQNPNLKFVLTGDFNDF- 588 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + K + N+ + + + + +D + +N + Sbjct: 589 ----EFSETAKAVAGNELVNMMLNHDAADRYSYFYRGSNQSLDNIFVSKNIADKTVFSPV 644 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ DF Sbjct: 645 HI----NASFMEEHGRASDHDPVIAQLDF 669 >gi|225166446|ref|ZP_03728100.1| endonuclease/exonuclease/phosphatase [Opitutaceae bacterium TAV2] gi|224799314|gb|EEG17887.1| endonuclease/exonuclease/phosphatase [Opitutaceae bacterium TAV2] Length = 313 Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats. Identities = 51/325 (15%), Positives = 112/325 (34%), Gaps = 39/325 (12%) Query: 3 RKYVLALVFFLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-- 58 RK +LA +F V C + + +WNI K + + Sbjct: 4 RKSILAAIFVFVACVVFADTKDTLTVATWNIRNYLPVNRRIDGKFRPDYPKPEAEKIALR 63 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + +DAD++ LQEMGS +A++ S + H+ + D +AV Sbjct: 64 AVIRQIDADVIALQEMGSGGHLAEL-----QRDLESEGCVYPHAHVLAGADPVRQLAVLS 118 Query: 119 KNVRVLQQSYPLLGAKDSFSRAG-NRRAVELLVEING----------KKIWVLDIHLKSF 167 + + + + R +R +E+ VE G +++ + +HLKS Sbjct: 119 RLPLREVREHSDMDFAYRDGRTPVSRGLLEVSVEAPGAESGEGLSTNRRVTLFVLHLKSR 178 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES-------LVPFVIAGDFNRKINYLGN 220 + S + +++A+ +++ + Q+ + F+IAGD N ++ Sbjct: 179 L---TTFPDDPESATWRAKEAEAIRNRVLQRFPNPAATGGGGGRFLIAGDCNDVVSSRPI 235 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 + L+ + + +D ++ +++ + Sbjct: 236 RALLKRGNTEIARLLPATDSRGETWTHYYAREETYSRVDNILVSPALAAAVVRMWVVDSP 295 Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304 SDH P++++ + Sbjct: 296 GV--------LVASDHRPVAVELRW 312 >gi|327470461|gb|EGF15917.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK330] Length = 749 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 101/334 (30%), Gaps = 59/334 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71 V K+ + S+NI S T + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401 Query: 72 QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ N A K T+ + L ++I A Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460 Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 V+++++ P + + R+++ E G+ Sbjct: 461 FLYDPNRVKLVEKDAGNSDEAASFSGGHLVKNPARIEPTNPAFTKVRKSLAAEFEFKGQH 520 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210 I V+ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GD Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + K + N+ + + + + + +D + +N Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R SDH P+ + DF Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|329767831|ref|ZP_08259347.1| hypothetical protein HMPREF0428_01044 [Gemella haemolysans M341] gi|328838932|gb|EGF88526.1| hypothetical protein HMPREF0428_01044 [Gemella haemolysans M341] Length = 748 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 50/329 (15%), Positives = 97/329 (29%), Gaps = 58/329 (17%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFLQEMGS 76 K+ + S+NI S + + K DI+ L E+ Sbjct: 322 PSEDKLTIASYNIENFSANNSGHDETP-----EEKVDKIANSFIKEVHSPDIITLIEVQD 376 Query: 77 YNA------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N K + + + +I A Sbjct: 377 NNGGVNDGTVDGVKSGEKLAQRIKSLGGPDYK-YTEIAPVDGKDGGKPGANIRVAYLYNP 435 Query: 119 KNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 V ++ + P S R+++ + G++I V+ Sbjct: 436 NRVTLIGKEKGGSEEAARFVNGHLEKNPSRVDPTSVHFEKVRKSLAAEFDFKGERIVVIA 495 Query: 162 IHLKSFCFLDSLENTYSPSCS----LLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215 HLKS D++ + PS ++A+ L +I + ++ + FV+ GDFN Sbjct: 496 NHLKSKLGDDAIYGSNQPSVENTRPKRIEEAKILNAFIKEGLRQNPNLKFVLTGDFNDFE 555 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 KTI N+ + + + + + +D ++ +N ++ Sbjct: 556 FSDSV-----KTIVGNELVNLMAEHEQGDRYSYFYRGSNQSLDNILISKNIKDKVVFSPV 610 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + DF Sbjct: 611 HI----NASFMEEHGRASDHDPVVVQIDF 635 >gi|241888840|ref|ZP_04776146.1| lpxtg cell wall surface protein [Gemella haemolysans ATCC 10379] gi|241864516|gb|EER68892.1| lpxtg cell wall surface protein [Gemella haemolysans ATCC 10379] Length = 866 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 52/329 (15%), Positives = 98/329 (29%), Gaps = 58/329 (17%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFLQEMGS 76 K+ + S+NI S + + K DI+ L E+ Sbjct: 323 PAEDKLTIASYNIENFSANNNGHDETP-----EEKVDKIANSFIKEVHSPDIITLIEVQD 377 Query: 77 YNA------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N K + + + +I A Sbjct: 378 NNGGVNDGTVDGVKSGEKLAQRIKSLGGPDYK-YTEIAPVDGKDGGKPGANIRVAYLYNP 436 Query: 119 KNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 K V ++ + P S R+++ E G++I V+ Sbjct: 437 KRVTLIGKEKGGSEEAARFVNGHLEKNPARIDPTSVHFEKVRKSLAAEFEFKGERIVVIA 496 Query: 162 IHLKSFCFLDSLENTYSPSCS----LLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215 HLKS D++ + PS ++A+ L +I + ++ + FV+ GDFN Sbjct: 497 NHLKSKLGDDAIYGSNQPSVENTKAKRIEEAKILNAFIKEGLRQNPNLKFVLTGDFNDFE 556 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 KTI N+ + + + + + +D ++ +N ++ Sbjct: 557 FSDSV-----KTIVGNELVNLMAEHEQGDRYSYFYRGSNQSLDNVLISKNIKDKVVFSPV 611 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + DF Sbjct: 612 HI----NASFMEEHGRASDHDPVVVQIDF 636 >gi|324991333|gb|EGC23266.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK353] Length = 749 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 102/334 (30%), Gaps = 59/334 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71 V K+ + S+NI S T + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401 Query: 72 QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ N A K T+ + L ++I A Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460 Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 V+++++ P + + + R+++ E G+ Sbjct: 461 FLYDPNRVKLVEREAGTSDEAASFSGGHLVKNPARISPTNPAFTKVRKSLAAEFEFKGQH 520 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210 I V+ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GD Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + K + N+ + + + + + +D + +N Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R SDH P+ + DF Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|262283216|ref|ZP_06060983.1| LPXTG cell wall surface protein [Streptococcus sp. 2_1_36FAA] gi|262261468|gb|EEY80167.1| LPXTG cell wall surface protein [Streptococcus sp. 2_1_36FAA] Length = 779 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 101/334 (30%), Gaps = 59/334 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71 + K+ + S+NI S + T + + DI+ L Sbjct: 346 ISPLYPSEDKLTIASYNIENFSANTQKGETPD------EKVTKIANSFINEIHSPDIITL 399 Query: 72 QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ N A K + + ++I A Sbjct: 400 IEVQDDNGSVNDGTTSGVKSGEKLAARIKELGGKNYK-YTEVAPFDGQDGGKPGSNIRVA 458 Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 V+++++ P + + R+++ E G+ Sbjct: 459 FLYNPDRVKLVEKEAGKSDEAASFSGGHLVKNPARIDPTNPAFTKVRKSLAAEFEFKGQH 518 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210 + V+ HLKS D++ + P+ ++A+ L +++ + ++ + FV+ GD Sbjct: 519 VVVIANHLKSKLGDDAVYGSNQPAVQHTQAARIEEAKILNNFVQEGLRQNPNLKFVLTGD 578 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + K I N+ + + + + + +D + +N Sbjct: 579 FNDF-----EFSETAKAIAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 633 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 I R SDH P+ + DF Sbjct: 634 IFAPVHI----NASFMEEHGRASDHDPVVVQLDF 663 >gi|332359097|gb|EGJ36918.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK49] Length = 749 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 101/334 (30%), Gaps = 59/334 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71 V K+ + S+NI S T + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401 Query: 72 QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ N A K T+ + L ++I A Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460 Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 V+++++ P + + R+++ E G+ Sbjct: 461 FLYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIEPTNPAFTKVRKSLAAEFEFKGQH 520 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210 I V+ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GD Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + K + N+ + + + + + +D + +N Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R SDH P+ + DF Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|325690981|gb|EGD32981.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK115] Length = 749 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 102/334 (30%), Gaps = 59/334 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71 V K+ + S+NI S T + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401 Query: 72 QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ N A K T+ + L ++I A Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460 Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 V+++++ P A + + R+++ E G+ Sbjct: 461 FLYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 520 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210 I V+ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GD Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + K + N+ + + + + + +D + +N Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R SDH P+ + DF Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|327462960|gb|EGF09281.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK1] Length = 749 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 101/334 (30%), Gaps = 59/334 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71 V K+ + S+NI S T + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401 Query: 72 QEMGSYNA------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ N K T+ + L ++I A Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLASRIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460 Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 V+++++ P A + + R+++ E G+ Sbjct: 461 FLYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 520 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210 I V+ HLKS D++ + P+ +QA+ L +I + ++ + FV+ GD Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFIQEGLRQNPNLKFVLTGD 580 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + K + N+ + + + + + +D + +N Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R SDH P+ + DF Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|324994996|gb|EGC26909.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK678] Length = 749 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 101/334 (30%), Gaps = 59/334 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71 V K+ + S+NI S T + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401 Query: 72 QEMGSYNA------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ N K T+ + L ++I A Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLASRIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460 Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 V+++++ P A + + R+++ E G+ Sbjct: 461 FLYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 520 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210 I V+ HLKS D++ + P+ +QA+ L +I + ++ + FV+ GD Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFIQEGLRQNPNLKFVLTGD 580 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + K + N+ + + + + + +D + +N Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R SDH P+ + DF Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|324993691|gb|EGC25610.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK405] gi|325696321|gb|EGD38212.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK160] Length = 749 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 101/334 (30%), Gaps = 59/334 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71 V K+ + S+NI S T + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401 Query: 72 QEMGSYNA------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ N K T+ + L ++I A Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLASRIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460 Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 V+++++ P A + + R+++ E G+ Sbjct: 461 FLYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 520 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210 I V+ HLKS D++ + P+ +QA+ L +I + ++ + FV+ GD Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFIQEGLRQNPNLKFVLTGD 580 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + K + N+ + + + + + +D + +N Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R SDH P+ + DF Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|327474564|gb|EGF19969.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK408] Length = 749 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 102/334 (30%), Gaps = 59/334 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71 + K+ + S+NI S T + + DI+ L Sbjct: 348 ISPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401 Query: 72 QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ N A K T+ + L ++I A Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460 Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 V+++++ P A + + R+++ E G+ Sbjct: 461 FLYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 520 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210 I V+ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GD Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + K + N+ + + + + + +D + +N Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R SDH P+ + DF Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|315181613|gb|ADT88526.1| Metal-dependent hydrolase [Vibrio furnissii NCTC 11218] Length = 264 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 108/275 (39%), Gaps = 23/275 (8%) Query: 39 GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 S + KRT+ D+ L ++ + +++D++ QE+ S A+ V + + Sbjct: 4 NASAPVDKSKRTSEDFAALSKHFRTVNSDVLAFQEVDSVQAIQNVVGSAYQIVLSDRAQP 63 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKI 157 + + + + +T AVR L G + R A +++ + + + Sbjct: 64 AHEQHQFKDLNQYTGFAVRNTVPFSDPADVDLYGKRHH----KLRFAAYIVLYPDSPQPV 119 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 L +HLK+ C SC L Q + L WI Q++ +VI GDFN + Y Sbjct: 120 HTLSVHLKAGCSG--KFRANQTSCQTLLTQGKALNAWIKQRESKQQAYVILGDFNHNLAY 177 Query: 218 LGNNDDFWKTIDPNDSL--IRFPKEKDSRCN------ANKNLRNKIPIDYFVMDQNAYKF 269 G D W+T+ + ++ + C N+ + + ID+ ++ Sbjct: 178 RG--DWLWQTMTQGTLIEPTLASRQTPATCKVRSRQQPNQLHQFRSLIDHIIVSPTL--- 232 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ + D+ LSDHCP+ + + Sbjct: 233 -KASDTQQVNFESQDVLRYA--LSDHCPLRSELQW 264 >gi|332367348|gb|EGJ45082.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK1059] Length = 736 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 102/334 (30%), Gaps = 59/334 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71 V K+ + S+NI S T + + DI+ L Sbjct: 335 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 388 Query: 72 QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ N A K T+ + L ++I A Sbjct: 389 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 447 Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 V+++++ P A + + R+++ E G+ Sbjct: 448 FLYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQN 507 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210 I V+ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GD Sbjct: 508 IVVIVNHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 567 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + K + N+ + + + + + +D + +N Sbjct: 568 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 622 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R SDH P+ + DF Sbjct: 623 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 652 >gi|327490122|gb|EGF21910.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK1058] Length = 749 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 102/334 (30%), Gaps = 59/334 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71 V K+ + S+NI S T + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401 Query: 72 QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ N A K T+ + L ++I A Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460 Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 V+++++ P A + + R+++ E G+ Sbjct: 461 FLYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQN 520 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210 I V+ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GD Sbjct: 521 IVVIVNHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + K + N+ + + + + + +D + +N Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R SDH P+ + DF Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|254780797|ref|YP_003065210.1| hypothetical protein CLIBASIA_03440 [Candidatus Liberibacter asiaticus str. psy62] gi|254040474|gb|ACT57270.1| hypothetical protein CLIBASIA_03440 [Candidatus Liberibacter asiaticus str. psy62] Length = 231 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 112/227 (49%), Positives = 158/227 (69%), Gaps = 9/227 (3%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 AQ++R+ SWNIN LSE+ GV+L+KNSV R +DY LL++YA+ LDADIV LQE+GSY A+ Sbjct: 4 AQRIRIASWNINNLSEKSGVALFKNSVIREDNDYALLQKYAEQLDADIVCLQEIGSYEAI 63 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +VFP + W I YS H+ TAI +RK + +LQ+SY + + S+A Sbjct: 64 KRVFPNDKWDILYSGSNTDKHAMH-------TAIVIRKGAIHLLQKSYLPMDTEGLDSKA 116 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 G RRAVE+L E++G+KIW+LDIHLKSFCFLDS+E++Y SC +L+ QA WLK W+ QK Sbjct: 117 GKRRAVEILFEVDGRKIWLLDIHLKSFCFLDSIEDSYISSCYMLNLQATWLKQWVDQKNN 176 Query: 201 SLVPFVIAGDFNR--KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 +PF+IAGDFNR ++ G D+ W+ I+ +++L+R P +K+ Sbjct: 177 LNMPFIIAGDFNRKINHSHSGIKDELWQKINQDNTLMRLPHKKNHNA 223 >gi|332358304|gb|EGJ36130.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK355] Length = 749 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 102/334 (30%), Gaps = 59/334 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71 V K+ + S+NI S T + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401 Query: 72 QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ N A K T+ + L ++I A Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460 Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 V+++++ P A + + R+++ E G+ Sbjct: 461 FLYDPNRVKLVEKEAGTSEEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 520 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210 I V+ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GD Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + K + N+ + + + + + +D + +N Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDVADRYSYFYRGSNQSLDNIFISKNLAGKA 635 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R SDH P+ + DF Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|86148017|ref|ZP_01066320.1| Metal-dependent hydrolase [Vibrio sp. MED222] gi|85834241|gb|EAQ52396.1| Metal-dependent hydrolase [Vibrio sp. MED222] Length = 215 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 55/219 (25%), Positives = 102/219 (46%), Gaps = 9/219 (4%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +++ ++ + + + + + + SWNI LS E V+ + + +R +D+ L QY Sbjct: 1 MKRLQNWIMLGCLLSSQAFGEPLTISSWNIEWLSTNEAVNKFSD--QRDQADFDKLEQYF 58 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 ++L++D+V QE+ NA+ ++ + N + + + +T AVRK + Sbjct: 59 QSLNSDVVAFQEVDDINAIQRIAGDQYKILMSDRALPENSNHQFKEVNQYTGFAVRKGII 118 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 +PL + R A ++V+ + K I +L +HLK+ C S + C Sbjct: 119 LTDYADFPLESGA----NSKLRFASYMVVKTDTKPIHMLSVHLKAGC---SGAYKSNRDC 171 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 S L QAQ L WI Q++ + I GDFN ++Y Sbjct: 172 SRLKDQAQQLNKWIQQRERQGQDYAILGDFNHNLSYSEI 210 >gi|157151208|ref|YP_001450928.1| LPXTG cell wall surface protein [Streptococcus gordonii str. Challis substr. CH1] gi|157076002|gb|ABV10685.1| LPXTG cell wall surface protein, nuclease/phosphatase domain [Streptococcus gordonii str. Challis substr. CH1] Length = 779 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 102/334 (30%), Gaps = 59/334 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71 + K+ + S+NI S + T + + DI+ L Sbjct: 346 ISPLYPSEDKLTIASYNIENFSANTQKGETPD------EKVTKIANSFINEIHSPDIITL 399 Query: 72 QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ N A K + + L ++I A Sbjct: 400 IEVQDDNGSVNDGTTSGVKSGEKLAARIKELGGKNYK-YTEVAPLDGQDGGKPGSNIRVA 458 Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 V+++++ P + + R+++ E G+ Sbjct: 459 FLYNPDRVKLVEKEAGTSDKAASFSGGHLLKNPARIDPTNPAFTKVRKSLVAEFEFKGQH 518 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210 + V+ HLKS D++ + P+ ++A+ L +++ + ++ + FV+ GD Sbjct: 519 VVVIANHLKSKLGDDAVYGSNQPAIQHTQAARIEEAKILNNFVQEGLRQNPNLKFVLTGD 578 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + K I N+ + + + + + +D + +N Sbjct: 579 FNDF-----EFSETAKAIAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 633 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 I R SDH P+ + DF Sbjct: 634 IFAPVHI----NASFMEEHGRASDHDPVVVQLDF 663 >gi|312130396|ref|YP_003997736.1| endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] gi|311906942|gb|ADQ17383.1| Endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] Length = 275 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 93/299 (31%), Gaps = 33/299 (11%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 + L+ + AQ +R+ S+NI +GV+ W + + + D D Sbjct: 4 FFILILLLSVQASAQNLRISSYNIRMNRANDGVNNWNLRK-------DKVNELIRYHDFD 56 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 IV +QE + + + S + S T+ K+ Sbjct: 57 IVGVQEAFKDQ-LDDMLRMKEYAYTGSGREDGKSAGEHSAILYKTSRFKLLKSGDFWYSE 115 Query: 128 YPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 P + K +R NR + + K+ +V + H F S LL Sbjct: 116 TPDVPGKGWDARCCNRICSWARFKDLVTKKEFYVFNSH-----FDHEGVEARRNSGKLLV 170 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + + + +P + GD N + D ++ P Sbjct: 171 AKMKEIA--------GKLPVIAMGDLNSTPDTEQVVYISQHYNDTFNASEMPPYGPIGTF 222 Query: 246 NANKNL-RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 NA K K IDY + ++ F Y + K SDH P+ +D + Sbjct: 223 NAFKYDAALKDRIDYIFVSEH---------FKVKKYATLTDSYQQKFPSDHLPVVVDLE 272 >gi|319939609|ref|ZP_08013968.1| LPXTG cell wall surface protein [Streptococcus anginosus 1_2_62CV] gi|319811198|gb|EFW07504.1| LPXTG cell wall surface protein [Streptococcus anginosus 1_2_62CV] Length = 736 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 47/329 (14%), Positives = 98/329 (29%), Gaps = 59/329 (17%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFLQEMGS 76 K+ + S+NI S + + + + + DI+ L E+ Sbjct: 357 PSEDKLTIASYNIENFSANNATGETPD------AKVEKIAKSFINEIHSPDIITLIEVQD 410 Query: 77 YN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N A K + + ++I A Sbjct: 411 NNGSVNDGTVSGVQSGEKLAAKIKQLGGKEYKYVEVA-PVDGADGGKPGSNIRVAFLYNP 469 Query: 119 KNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 + V+++++ P + R+++ E G++I V+ Sbjct: 470 QRVKIVEREAGSSTEAAAFKDGHLVKNPARIDPTNPVFEKVRKSLAAEFEFKGERIVVIA 529 Query: 162 IHLKSFCFLDSLENTYSPSCS----LLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215 HLKS D++ + P+ +Q + L ++ + K+ + FV+ GDFN Sbjct: 530 NHLKSKLGDDAVYGSKQPAVQNTLAQRIEQGKLLNAFVKEGLKQNPNLKFVLTGDFNDF- 588 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + K + N+ + + + + +D + +N + Sbjct: 589 ----EFSETAKAVAGNELVNMMLNHDAADRYSYFYRGSNQSLDNIFVSKNIADKTVFSPV 644 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ DF Sbjct: 645 HI----NASFMEEHGRASDHDPVIAQLDF 669 >gi|325695083|gb|EGD36986.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK150] Length = 749 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 102/334 (30%), Gaps = 59/334 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71 V K+ + S+NI S T + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401 Query: 72 QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ N A K T+ + L ++I A Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460 Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 V+++++ P A + + R+++ E G+ Sbjct: 461 FLYDPNRVKLVEKEAGMSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 520 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210 I ++ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GD Sbjct: 521 IVIIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + K + N+ + + + + + +D + +N Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R SDH P+ + DF Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|325687087|gb|EGD29110.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK72] Length = 749 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 102/334 (30%), Gaps = 59/334 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71 V K+ + S+NI S T + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTKIANSFINEIHSPDIITL 401 Query: 72 QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ N A K T+ + L ++I A Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460 Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 V+++++ P A + + R+++ E G+ Sbjct: 461 FLYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 520 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210 I V+ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GD Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + K + N+ + + + + + +D + +N Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDVADRYSYFYRGSNQSLDNIFISKNLAGKA 635 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R SDH P+ + DF Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|332362279|gb|EGJ40079.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK1056] Length = 749 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 101/334 (30%), Gaps = 59/334 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71 V K+ + S+NI S T + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401 Query: 72 QEMGSYNA------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ N K T+ + L ++I A Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLASRIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460 Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 V+++++ P A + + R+++ E G+ Sbjct: 461 FLYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 520 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210 I V+ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GD Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + K + N+ + + + + + +D + +N Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R SDH P+ + DF Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|328946887|gb|EGG41024.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK1087] Length = 749 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 102/334 (30%), Gaps = 59/334 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71 V K+ + S+NI S T + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTKIANSFINEIHSPDIITL 401 Query: 72 QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ N A K T+ + L ++I A Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460 Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 V+++++ P A + + R+++ E G+ Sbjct: 461 FLYDPNRVKLVEKEAGTSDEAASFSNGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 520 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210 I ++ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GD Sbjct: 521 IVIIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + K + N+ + + + + + +D + +N Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R SDH P+ + DF Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|327462051|gb|EGF08380.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK1057] Length = 720 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 102/334 (30%), Gaps = 59/334 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71 V K+ + S+NI S T + + DI+ L Sbjct: 319 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTKIANSFINEIHSPDIITL 372 Query: 72 QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ N A K T+ + L ++I A Sbjct: 373 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 431 Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 V+++++ P A + + R+++ E G+ Sbjct: 432 FLYDPNRVKLVEKEAGTSDEAASFSNGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 491 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210 I ++ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GD Sbjct: 492 IVIIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 551 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + K + N+ + + + + + +D + +N Sbjct: 552 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 606 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R SDH P+ + DF Sbjct: 607 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 636 >gi|260770527|ref|ZP_05879460.1| hypothetical protein VFA_003594 [Vibrio furnissii CIP 102972] gi|260615865|gb|EEX41051.1| hypothetical protein VFA_003594 [Vibrio furnissii CIP 102972] Length = 264 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 54/275 (19%), Positives = 109/275 (39%), Gaps = 23/275 (8%) Query: 39 GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 S + KRT+ D+ L ++ + +++D++ QE+ S A+ V + + Sbjct: 4 NASAPVDKSKRTSEDFAALSKHFRTVNSDVLAFQEVDSMQAIQNVVGSAYQIVLSDRAQP 63 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKI 157 + + + + +T A+R L G + R A +++ + + + Sbjct: 64 AHAQHQFKDLNQYTGFAIRNTVPFSDPADVDLYGKRHH----KLRFAAYIVLYPDSPQPV 119 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 L +HLK+ C SC L Q + L WI Q++ +VI GDFN + Y Sbjct: 120 HTLSVHLKAGCSG--KFRANQTSCQTLLTQGKALNAWIKQREAKQQAYVILGDFNHNLAY 177 Query: 218 LGNNDDFWKTIDPNDSL--IRFPKEKDSRCN------ANKNLRNKIPIDYFVMDQNAYKF 269 G D W+T+ + ++ + C N+ + + ID+ ++ Sbjct: 178 RG--DWLWQTMTQGTLIEPTLASRQTPATCKVRSRQQPNQLHQFRSLIDHIIISPTL--- 232 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + ++ + D+ LSDHCP+ + + Sbjct: 233 -KASATQQVNFESQDVLRYA--LSDHCPLRSELQW 264 >gi|255036167|ref|YP_003086788.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM 18053] gi|254948923|gb|ACT93623.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM 18053] Length = 280 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 91/306 (29%), Gaps = 32/306 (10%) Query: 2 IRKYVLALVFFLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 ++K+ L L+ L+ TAS AQ + + S+N+ + +GV+ W N ++ Sbjct: 1 MKKFALYLLAMLLVTTASFAQKTATINVASYNLRYNTPNDGVNAWPNRK-------ENVK 53 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + + DI +QE + V + + S Sbjct: 54 GLIRFHEFDIFGVQEALVGQ-LKDVAELPEFAYYGKGRDDGKEGGEHSAIFYKKDRFKLL 112 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K+ P + NR E K ++ F Sbjct: 113 KSGDFWLSETPDKPGLGWDATCCNRICSWAQFEDLKTKKKFFFFNVH---FDHQGVEARR 169 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 S L+ ++ + + ++ GDFN D +D + P Sbjct: 170 QSGHLMVKKIKEIA--------GNSTAILTGDFNSTPETEQIKTLGAALNDTHDVTKQAP 221 Query: 239 KEKDSRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + N+ K K IDY + +N + Y + SDH P Sbjct: 222 YGPEGTFNSFKFDAPMKARIDYIFVSKN---------VDVLKYGVLTDSKEQRYPSDHQP 272 Query: 298 ISIDYD 303 + + + Sbjct: 273 VLVKIE 278 >gi|323351045|ref|ZP_08086702.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis VMC66] gi|322122769|gb|EFX94478.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis VMC66] Length = 749 Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 101/334 (30%), Gaps = 59/334 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71 V K+ + S+NI S T + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401 Query: 72 QEMGSYNA------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ N K T+ + L ++I A Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLASRIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460 Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 V+++++ P A + + R+++ E G+ Sbjct: 461 FLYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 520 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210 I V+ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GD Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + K + N+ + + + + + +D + +N Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDVADRYSYFYRGSNQSLDNIFISKNLAGKT 635 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R SDH P+ + DF Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|283778620|ref|YP_003369375.1| endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068] gi|283437073|gb|ADB15515.1| Endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068] Length = 309 Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 100/311 (32%), Gaps = 34/311 (10%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSV---------------KRTTSDYTLLRQYAKNLD 65 A VR+ S+N L + + + + K + Sbjct: 2 ATTVRVASFNCENLFARFEFKPNVDLDRISTDGWEINETLFEPNKPEARKITARAIKEAN 61 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 ADI+ QE+ + + + + +N + + + + + I A+ R+K V Sbjct: 62 ADIIAFQEVENLDVLKRF--RNQYLGGFKSYPHAVLIEGNDPRLIDVAVLSREKFPIVST 119 Query: 126 QSYPLLGAK-DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 +S+ + A S +R +E+ +E+ + + + HLKS + L Sbjct: 120 RSHHHVKANATSRGFVFSRDCLEVDIEVGSQTLTLFVNHLKSMMGGRDQTHERR---KLQ 176 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINY-LGNNDDFWKTIDPNDSLIRFPKEKDS 243 S + L + PF++ GD N ++ + + N + + Sbjct: 177 STWVKKLVNQRFGTDPGNNPFIVLGDLNDYLDSASDPDSGIRNLVKWNQVENVIERLPAA 236 Query: 244 RCNANKNLRNKIP--IDYFVMDQNAYKFLIQESF-------SEILYNEDDIK---SRGKR 291 + +DY ++ ++ + Y + + Sbjct: 237 ERWTHYWNGGNEYRQLDYLLVSKSLSSAVQSVEIIRGGLPTRATNYTGPRFPGVGTNDPK 296 Query: 292 LSDHCPISIDY 302 SDHCPI ++ Sbjct: 297 ASDHCPIVVEL 307 >gi|322390045|ref|ZP_08063581.1| endonuclease/exonuclease/phosphatase [Streptococcus parasanguinis ATCC 903] gi|321143252|gb|EFX38694.1| endonuclease/exonuclease/phosphatase [Streptococcus parasanguinis ATCC 903] Length = 793 Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats. Identities = 50/333 (15%), Positives = 96/333 (28%), Gaps = 59/333 (17%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQ 72 T K+ + S+NI S + TL+ + + DI+ L Sbjct: 359 ALTQPSEDKLTIASYNIENFSANNAKNETP------EDKVTLIANSFIHEIHNPDIITLI 412 Query: 73 EMGSYNA------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 E+ N K ++ + + ++I I Sbjct: 413 EVQDNNGSVDDGTTSGVESGRKLANRIKELGGKSYE-YTEVAPVDGADGGKPGSNIRLGI 471 Query: 115 AVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 + V + ++ P A + S R+++ + E G+ + Sbjct: 472 LYNPERVSLAKKEAATSNEAAQFDKGHLVKNPARIAPNDPSFDHTRKSLAVEFEFKGQPV 531 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCS----LLSQQAQWLKDWITQ--KKESLVPFVIAGDF 211 V+ HLKS D++ P+ QA + ++ + K+ FV+ GDF Sbjct: 532 VVIANHLKSKIGDDAIYGASQPAVEHTLPTREAQASVIHQFVQEGLKQNPKTTFVLTGDF 591 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N + + N+ + + + +D + N Sbjct: 592 NDYDFST-----TAQILAGNELTNLMAQHDAGDRYSYFYRGSNQVLDNIFISNNMAAKAR 646 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 E R SDH P+ + DF Sbjct: 647 FEPVHI----NASFMKEHGRASDHDPVLVQIDF 675 >gi|81299809|ref|YP_400017.1| hypothetical protein Synpcc7942_1000 [Synechococcus elongatus PCC 7942] gi|81168690|gb|ABB57030.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] Length = 1076 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 43/323 (13%), Positives = 93/323 (28%), Gaps = 44/323 (13%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 V ++ + ++N+ L + + + + + + DI+ LQE Sbjct: 629 VSTLTRGNDQLTVATYNVLNLDPNDNDGDADIANGQFAAIARQIINNLNS--PDIIALQE 686 Query: 74 MGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + + T+ + N S +I TA Sbjct: 687 VQDNSGSLNDGVTAANLTLQTLVDAIAAAGGPTYAFIDNPFITNNASGGQPGANIRTAYL 746 Query: 116 VR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + V + + + AG R + E NG+ + +++ H S + Sbjct: 747 YDPSRVSFVEDSLTTIGSQQPGEAFAGARLPLVADFEFNGETVTLVNNHFSSKGGSAPIL 806 Query: 175 NTYSPSCSL------------LSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGN 220 T P S Q+Q ++D++ + + ++ GDFN Sbjct: 807 GTAQPFESRQEDSTVNGSLDDRQAQSQAVQDYVNGRLGNDPTAKVIVLGDFNEFEFVSPV 866 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 D T ++ N ID+ ++ + + Sbjct: 867 RDLAANT----GLTNLTELLPENERYTFIFQGNSQSIDHILVSGSLANR-----AEIDIV 917 Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303 N + + + SDH P+ + Sbjct: 918 NVNTEFAESLQASDHDPVLARFT 940 >gi|56750554|ref|YP_171255.1| hypothetical protein syc0545_d [Synechococcus elongatus PCC 6301] gi|56685513|dbj|BAD78735.1| hypothetical protein [Synechococcus elongatus PCC 6301] Length = 1088 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 43/323 (13%), Positives = 93/323 (28%), Gaps = 44/323 (13%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 V ++ + ++N+ L + + + + + + DI+ LQE Sbjct: 641 VSTLTRGNDQLTVATYNVLNLDPNDNDGDADIANGQFAAIARQIINNLNS--PDIIALQE 698 Query: 74 MGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + + T+ + N S +I TA Sbjct: 699 VQDNSGSLNDGVTAANLTLQTLVDAIAAAGGPTYAFIDNPFITNNASGGQPGANIRTAYL 758 Query: 116 VR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + V + + + AG R + E NG+ + +++ H S + Sbjct: 759 YDPSRVSFVEDSLTTIGSQQPGEAFAGARLPLVADFEFNGETVTLVNNHFSSKGGSAPIL 818 Query: 175 NTYSPSCSL------------LSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGN 220 T P S Q+Q ++D++ + + ++ GDFN Sbjct: 819 GTAQPFESRQEDSTVNGSLDDRQAQSQAVQDYVNGRLGNDPTAKVIVLGDFNEFEFVSPV 878 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 D T ++ N ID+ ++ + + Sbjct: 879 RDLAANT----GLTNLTELLPENERYTFIFQGNSQSIDHILVSGSLANR-----AEIDIV 929 Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303 N + + + SDH P+ + Sbjct: 930 NVNTEFAESLQASDHDPVLARFT 952 >gi|296876028|ref|ZP_06900084.1| endonuclease/exonuclease/phosphatase [Streptococcus parasanguinis ATCC 15912] gi|296432939|gb|EFH18730.1| endonuclease/exonuclease/phosphatase [Streptococcus parasanguinis ATCC 15912] Length = 770 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 97/331 (29%), Gaps = 59/331 (17%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQEM 74 T K+ + S+NI S + TL+ + + DI+ L E+ Sbjct: 342 TQPSEDKLTIASYNIENFSANNAKNETP------EDKVTLIANSFIHEIHNPDIITLIEV 395 Query: 75 GSYNA------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 N K ++ + + ++I I Sbjct: 396 QDNNGSVDDGTTSGVESGRKLANRIKELGGKSYE-YTEVAPVDGADGGKPGSNIRLGILY 454 Query: 117 RKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + V + ++ P A + S R+++ + E G+ + V Sbjct: 455 NPERVSLAKKEAATSNEAAQFDKGHLVKNPARIAPNDPSFDHTRKSLAVEFEFKGQPVVV 514 Query: 160 LDIHLKSFCFLDSLENTYSPSCS----LLSQQAQWLKDWITQ--KKESLVPFVIAGDFNR 213 + HLKS D++ P+ QA + ++ + K+ S FV+ GDFN Sbjct: 515 IANHLKSKIGDDAIYGASQPAVEHTLPTREAQASVIHQFVQEGLKQNSKTTFVLTGDFND 574 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273 + + N+ + + + +D + N E Sbjct: 575 YDFST-----TAQILAGNELTNLMDQHDAGDRYSYFYRGSNQVLDNIFISNNMAAKARFE 629 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + +F Sbjct: 630 PVHI----NASFMKEHGRASDHDPVLVQIEF 656 >gi|167644355|ref|YP_001682018.1| endonuclease/exonuclease/phosphatase [Caulobacter sp. K31] gi|167346785|gb|ABZ69520.1| Endonuclease/exonuclease/phosphatase [Caulobacter sp. K31] Length = 266 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 40/281 (14%), Positives = 90/281 (32%), Gaps = 38/281 (13%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+RL+++N++ + D + + + D+V LQE+ A K Sbjct: 2 KLRLMTYNVHRCVGTDR-----------KLDVERVAEVIAAENPDVVALQELDVRRARTK 50 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + H +++ A+ ++ L Sbjct: 51 GVDQAHRLAELLKMKSHFHPAMAVEEELY-GDAILTALPEKKVKADGLPLYTRIPG-LEP 108 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R A+ + VE+ G + +++ HL + + +LL +Q +DW Sbjct: 109 RGAIWVTVEVGGVPVQIINTHL-----GLVPQEQKRQAAALLGEQWMAHEDW-------K 156 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 P ++ GDFN + + K+ + ++ + ID+ + Sbjct: 157 APGILLGDFNASPYSAT-YRLLRAALRDAQTQSPTWKKTPTATFPSRFPF--MRIDHVFL 213 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + + SDH P+ +D + Sbjct: 214 TKGLETVNVSSPY----------GPLARVASDHLPLVVDLE 244 >gi|182412613|ref|YP_001817679.1| endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] gi|177839827|gb|ACB74079.1| Endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] Length = 808 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 38/287 (13%), Positives = 83/287 (28%), Gaps = 44/287 (15%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A A ++RL+++N++ S +G + + + D+V LQE+ Sbjct: 549 APAANRLRLMTYNVHGCSGMDGRVSPR-----------RVARVIAAHGPDLVALQEIDLG 597 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 ++ + ++ H A+ + + + L + Sbjct: 598 RRRSRAEDQAALIAHQLGLHMVFCPTVTRGQ-EHYGHALLSRWPIEVVKRKLLPHDPRGW 656 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWI 195 R A+ V I + V+ HL Q + L +W+ Sbjct: 657 -WKEPRAALWARVWIGDTPVHVVTTHLGLG-------------RRERLLQMKMLLSPEWL 702 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 V+ GDFN + D ++ + + R + Sbjct: 703 -GGLRDDERVVLCGDFNLTPGSAPYGLMANRLQDAQ-----AARDGHRPLSTFSSNRPFV 756 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D+ + + ++ + SDH P+ +D Sbjct: 757 RLDHIFISPHFRVQDVRVP----------RSELTRVASDHLPLIVDL 793 >gi|269104284|ref|ZP_06156980.1| metal-dependent hydrolase [Photobacterium damselae subsp. damselae CIP 102761] gi|268160924|gb|EEZ39421.1| metal-dependent hydrolase [Photobacterium damselae subsp. damselae CIP 102761] Length = 296 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 67/314 (21%), Positives = 126/314 (40%), Gaps = 35/314 (11%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 I+ L L + + + A+++R++SWN+ L+ + R T D++ +R Sbjct: 4 IKPLKLILAYIALSPNVTTAEELRIMSWNMQWLNHHASSPV-----LRDTDDFSQIRSII 58 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + +D DI+ QE+GS A+ V P + I S+ N + T A+RK Sbjct: 59 EQVDPDILAFQEVGSLKAMTMVLPLKQYDILLSSRADHPR-YTFPNTNQFTGFAIRKNIR 117 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + K + ++ G R L + ++I +L+IHLK+ C ++ S +C Sbjct: 118 YRELPDF----TKINLNKKGLRYGKNLKIWWQDQQIHLLNIHLKAGC----KQSKRSKAC 169 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-------NYLGNNDDFWKTIDPNDSL 234 L +Q + L W+ + E+ +++ GDFN + +N F+K + + Sbjct: 170 RQLKKQLKLLSLWLKTRIENNHSYILLGDFNYPLYTSLNNKKEKQHNHWFFKQLGIPTTA 229 Query: 235 IRFPKEKDSRCNANKNLR------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + C + + PID+ + Y ++ S Sbjct: 230 -LKQHKTSFSCQIKIHHKKSRLITYTQPIDHV-----ISDKINISKLETYQYTNKEMSSN 283 Query: 289 GKRLSDHCPISIDY 302 +LSDHCP+ Sbjct: 284 --QLSDHCPLYFSI 295 >gi|315224062|ref|ZP_07865903.1| endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea F0287] gi|314946033|gb|EFS98041.1| endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea F0287] Length = 274 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 91/302 (30%), Gaps = 32/302 (10%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++ + L F T S+AQ + ++++NI Q+GV+ W + + Sbjct: 1 MKPLLFILCFL---PTFSIAQDLTVMTYNIRCEVPQDGVNAWTDGN-----RKEKVFTVL 52 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + DI +QE + T+ + S Sbjct: 53 TEANPDIFGVQEALPHQLKFLEERFPTYQREGVGRDDGKEAGEHSAIFFKKGRFTLLDKG 112 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 P + + + NR + ++ WV ++H F + S Sbjct: 113 NFWLSQTPEVPSLGWDATCCNRICSWVKLKDKKTTFWVFNLH-----FDHEGKVAQVQSA 167 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 L+ Q+ + + ++ GDFN + + D S Sbjct: 168 DLVLQKIKEIAK--------GGKVILMGDFNLPTEHPAVQKIASQLYDTQLSPTNKTPN- 218 Query: 242 DSRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 NA K K ID+ + Q+S Y + + G SDH P+ + Sbjct: 219 MGTFNAFKTDEPLKGHIDFIFV---------QKSIKVKQYKIIETRIDGLYPSDHLPVWV 269 Query: 301 DY 302 + Sbjct: 270 EL 271 >gi|260172862|ref|ZP_05759274.1| hypothetical protein BacD2_13418 [Bacteroides sp. D2] gi|315921145|ref|ZP_07917385.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695020|gb|EFS31855.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 290 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 37/308 (12%), Positives = 69/308 (22%), Gaps = 26/308 (8%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +RK ++ L V AQ++ + S+N+ + + + +L Q Sbjct: 1 MRKLLIVLTLCGVSILN--AQQLNVASYNVRNSNPNDAKAGNG-----WEQRCPVLTQLI 53 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 D DI QE+ + + + K+ Sbjct: 54 TFHDFDIFGAQEVKHNQLEDMLNALPAYNYIGVGRDDGKTKGEYAPIFYRKDKFKLLKSG 113 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + A R + K +L S Sbjct: 114 NFWLSE-DTTKPNKGWDAAYTRICTWGEFKDKTGKFKFWFFNLHM---DHIGVVARRESA 169 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----NDDFWKTIDPNDSLIRF 237 L+ + + + P ++ GDFN + Sbjct: 170 KLVISKIKEMC--------GKDPVILTGDFNVDQTSESYQVLHESGILSDSYEVAQMRYA 221 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHC 296 + N N ID+ + N + SDH Sbjct: 222 TNGTCTGWNPNTY--TPNRIDHIFVTPNFTVEKYGVLTDTYRTKNETTGKYESHIPSDHF 279 Query: 297 PISIDYDF 304 P+ F Sbjct: 280 PVKAVLRF 287 >gi|256828980|ref|YP_003157708.1| Endonuclease/exonuclease/phosphatase [Desulfomicrobium baculatum DSM 4028] gi|256578156|gb|ACU89292.1| Endonuclease/exonuclease/phosphatase [Desulfomicrobium baculatum DSM 4028] Length = 837 Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 44/290 (15%), Positives = 93/290 (32%), Gaps = 44/290 (15%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 A +++VR++++N+++ +G + + + D+V LQE+ Sbjct: 561 SQAPHSEQVRVMTYNVHSCVGIDG-----------KLAAERIARVIAQANPDVVALQELD 609 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + A + Y + H + A+ + +S PL G Sbjct: 610 AGRARTGGEDQAQRIAHYLEMQHHFHPHIHV-ENEKYGDAILTHLPMRIIKSGPLPGHL- 667 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL--KD 193 + R A+ + ++++G ++ +++ HL Q + L D Sbjct: 668 PGGKLEPRGAIWVAIDLHGTEVNIVNTHLGLTS-------------RERVLQIEALLGDD 714 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 W+ + + P ++ GDFN + G + +D L + + Sbjct: 715 WL-GRLNADQPVILCGDFNCVPSSKGYKLMRSRFLDAQAELKEYR-----PVCTFYSRLP 768 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID+ + I K SDH P+ D Sbjct: 769 SFRIDHVFIQPGIQVTGITVP----------CSELAKVASDHLPLIADLT 808 >gi|262274141|ref|ZP_06051953.1| hypothetical protein VHA_001117 [Grimontia hollisae CIP 101886] gi|262221951|gb|EEY73264.1| hypothetical protein VHA_001117 [Grimontia hollisae CIP 101886] Length = 252 Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 67/250 (26%), Positives = 104/250 (41%), Gaps = 17/250 (6%) Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 +DAD+V QE+ S +++KV + ++S H + T AV+K V Sbjct: 9 IDADLVAFQEVDSEASLSKVLNPTAYDFYFSDRT--KHFNHSRRSHQFTGWAVKKGIKVV 66 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCS 182 + Y LG SR R + V+ + + +L IHLKS CF + SC Sbjct: 67 DHEDYQPLGLPTFLSRGNLRYGAYIEVKRENQPPLHLLSIHLKSGCF--ETPIRRNNSCK 124 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID-PNDSLIRFPKEK 241 L Q + L WI + + F+IAGDFN +N +D D+L++ K Sbjct: 125 KLDHQIEALSVWINARLKLGQDFIIAGDFNHYLNDKNEWVWKQLLLDVGEDNLVKLTKGT 184 Query: 242 DSRCNANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 ++C A K ID+ + + A L + Y+ + + RL Sbjct: 185 PAKCKARKYNYRTKRWEHVVYQKLIDHIIASKGAVSALNPPQARQYQYSYHAVATY--RL 242 Query: 293 SDHCPISIDY 302 SDHCPI +D Sbjct: 243 SDHCPIVVDL 252 >gi|326798228|ref|YP_004316047.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] gi|326548992|gb|ADZ77377.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] Length = 282 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 85/307 (27%), Gaps = 31/307 (10%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M RK + L ++ + AQ++R+ ++N+ + + +LW++ ++ Sbjct: 1 MKRKIIGVLCLLIIGISTLQAQQLRVATFNVRYANPGDTGNLWEDRAP-------VVAAL 53 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 D DI QE + + S K Sbjct: 54 IDFHDFDIFGTQEALKRQLDDISAALPEYQRYGLGRDDGQEGGEHSAIYFKKDRFFLLKK 113 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 P + +++ R + + K + S Sbjct: 114 GDFWLSETPDKPSFGWDAKSHKRICSWIQLRDKKSKREFFVFNAHY---DHQGIQARKES 170 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF--- 237 L+ + + + P + GD N + + + Sbjct: 171 SKLILNKIKEIAQ--------GAPTIFTGDMNGSEETEWYQALAQSALLKDTQKLVAKPY 222 Query: 238 -PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 P + K+L+ ID+ + ++ F + + GK SDH Sbjct: 223 KPNASFNGFGNEKSLQATAIIDHIFVTKD---------FKALKWGVLTDTYHGKFPSDHF 273 Query: 297 PISIDYD 303 P+ +D + Sbjct: 274 PVMVDLE 280 >gi|298482489|ref|ZP_07000675.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. D22] gi|298271468|gb|EFI13043.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. D22] Length = 316 Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 39/325 (12%), Positives = 87/325 (26%), Gaps = 36/325 (11%) Query: 1 MIRKYVLALVFFLVPC----TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 M K +L + + + + S+N+ + + + Y + Sbjct: 1 MKLKSLLLITLVTIAFCGCQSNYQPTTFTVASYNLRNANGNDSLHGNG-----WGQRYPV 55 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + + + D DI QE + + S T Sbjct: 56 IAKMVQYHDFDIFGTQECFLHQLKDMKEALPGYDYIGVGRDDGKTQGEHSAIFYRTDKFD 115 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + P + +K + R + L +L + Sbjct: 116 IIEKGDFWLSETPDVPSK-GWDAVLPRICSWGHFKCKDTGFEFLFFNLHM---DHIGKKA 171 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-TIDPNDSLI 235 S L+ ++ + L +P ++ GDFN + N K + + Sbjct: 172 RVESAYLVQEKMKELGK------GKNLPAILTGDFNVDQTHQSYNAFVEKGVLCDSYEKC 225 Query: 236 RFPKEKDSRCNANKNLRNK-IPIDYFVMDQNAYKFL---------------IQESFSEIL 279 F + N+ ID+ + + +E+ ++ Sbjct: 226 DFRYATNGTFNSFNPNSFTESRIDHVFVSPAFHVKRYGILTDTYRSIVGNGEKENANDCP 285 Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304 D + + SDH P+ ++ +F Sbjct: 286 EEIDIKAYQARTPSDHFPVKVELEF 310 >gi|223936857|ref|ZP_03628766.1| Endonuclease/exonuclease/phosphatase [bacterium Ellin514] gi|223894426|gb|EEF60878.1| Endonuclease/exonuclease/phosphatase [bacterium Ellin514] Length = 273 Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 36/298 (12%), Positives = 82/298 (27%), Gaps = 47/298 (15%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 L A R++++NI+ + D + K Sbjct: 17 IFCGFFVLLTNLQAESTNTFRVMTYNIHHGEGLDK-----------QVDLQRIADLIKQE 65 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 ADIV LQE+ + + S A+ + Sbjct: 66 KADIVALQEVDRNTERTGKRDFPAEFTRLTGMSCVF-SNNWPVQGGEYGTAILTRFPITK 124 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 ++ R ++ V++ +++ V++ H+ + + +++ Sbjct: 125 REH----SLLKMVGSKEQRGLLQAHVKMGDREVVVMNTHVDHRKTDEERLESIMEFATVI 180 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 ++A+ P + GDFN + +D + L + Sbjct: 181 KKKAEL-------------PVIFCGDFNDVPGS-PTYEQMSALLDDSWKL-----IGEGE 221 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + IDY + + +I SDH P+ +++ Sbjct: 222 GWTIPAEKPRRRIDYIWISK--KGPIIPLRAWV----------PASEASDHRPLVVEF 267 >gi|313156903|gb|EFR56341.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 294 Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 36/308 (11%), Positives = 79/308 (25%), Gaps = 22/308 (7%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 + K ++ + V + AQ ++NI L+ ++ ++ Sbjct: 1 MNKLLICMAVACVTAFNAAAQSFSAATYNIRQLNAKDTAEGNG-----WERRLPVISSLI 55 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + D DI QE+ + + S + Sbjct: 56 RFHDFDIFGAQEVFHSQLQGMLAALPGYDYVGVGRDDGAAGGEYSAIFYKRGRFRLLDSG 115 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 P K + R + E + SC Sbjct: 116 HFWLSEDPSKPGK-GWDAKYVRICTWGRFYDRQSRQRFWFFTTH---TDHRGEQAQAESC 171 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 L+ + + L ++ GDFN I + + Sbjct: 172 RLILAKIEELCR--------GERVILTGDFNVGETSRSYAILRDSGILSDTYDTAEIRYA 223 Query: 242 DSRCNANKNLR--NKIPIDYFVMDQNAYKF---LIQESFSEILYNEDDIKSRGKRLSDHC 296 ++ + IDY + ++ +++ + + K R + SDH Sbjct: 224 ETGTENWFDPDIKTFRRIDYLFVTPGFRVLRYGILTDTYRSENPDGGERKFRARTPSDHF 283 Query: 297 PISIDYDF 304 P+ ++ +F Sbjct: 284 PVQVELEF 291 >gi|300771475|ref|ZP_07081350.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum ATCC 33861] gi|300761464|gb|EFK58285.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum ATCC 33861] Length = 279 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 82/303 (27%), Gaps = 29/303 (9%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +RK ++A V + T + AQ+ R+ ++NI + + ++W L Sbjct: 1 MRKTIIATVLVALVSTMTYAQQFRIATYNIRQKNTHDTGNMWDERK-------EALTNLI 53 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 K +I QE + + S T K+ Sbjct: 54 KFHQFEIFGTQEGFNDQLADMERLLPGFKYIGVGRDDGAEKGEYSAIFYDTKRFEVSKSG 113 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + + + A R + + K + ++ F S Sbjct: 114 TFWLSATDISKPNKGWDAALPRICTWGIFKDKKTKKQFILMNTH---FDHVGVTARKESA 170 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 L+ +A+ +P +I GDFN I + + Sbjct: 171 KLMMAKAKEFA--------GNLPLIITGDFNVSETDEAYFTLANSGIVADSYSKIDSRYA 222 Query: 242 DSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ + FS Y GK SDH P+ Sbjct: 223 PNSTFNGFGKSIKPAERIDHIFITPQ---------FSVKKYGILTDTYVGKYPSDHFPVM 273 Query: 300 IDY 302 +D Sbjct: 274 VDL 276 >gi|88813281|ref|ZP_01128520.1| hypothetical protein NB231_07277 [Nitrococcus mobilis Nb-231] gi|88789453|gb|EAR20581.1| hypothetical protein NB231_07277 [Nitrococcus mobilis Nb-231] Length = 556 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 86/297 (28%), Gaps = 26/297 (8%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +RL S+N+ G +++ L + LDAD++ L E+ + + Sbjct: 269 GALRLASFNMENYFINRGGRGAESAAA-FRRQQRKLVEAIVALDADVLALHEVENRH--- 324 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + I ++ + + D + A+R + Q+ P + Sbjct: 325 RAVAALVRAINTASPSEARYLAAAAGADYGSG-AIRTVLLYREQRLVP-RSVWINEDSVF 382 Query: 142 NRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSP-----SCSLLSQQAQWLKDWI 195 R + ++G+ V + S L +QA L W+ Sbjct: 383 TRPPIAADFRRLDGEPATVGVVAAHLKSKGGCRARGDSDQGRGCWGRLRRRQAAALSQWL 442 Query: 196 TQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 + + F++ GD N + + + + Sbjct: 443 KRLQAAVDQPRFLLMGDLNSYPGEA----AVQTLLSAGLRDLIAERVAPADRYTYVYHGY 498 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG--------KRLSDHCPISIDY 302 +D+ + + Q + I +E R SDH P+ +D Sbjct: 499 AGYLDHALATVALADAVGQVAIWHINADEPRYLGYTNPRAKPTFYRSSDHDPVVVDL 555 >gi|227536399|ref|ZP_03966448.1| endonuclease/exonuclease/phosphatase family protein [Sphingobacterium spiritivorum ATCC 33300] gi|227243775|gb|EEI93790.1| endonuclease/exonuclease/phosphatase family protein [Sphingobacterium spiritivorum ATCC 33300] Length = 279 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 85/303 (28%), Gaps = 29/303 (9%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +RK ++A VF + T + AQ+ R+ ++NI + + ++W L Sbjct: 1 MRKTIIATVFVALVSTMTYAQQFRIATYNIRQKNTHDIGNMWDERK-------EALTNLI 53 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 K + +I QE + V + S T K+ Sbjct: 54 KFHEFEIFGTQEGFNDQLVDMERLLPGFKYIGVGRDDGAEKGEYSAIFYDTKRFEVSKSG 113 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + + + A R + + K + ++ F S Sbjct: 114 TFWLSATDISKPNKGWDAALPRICTWGIFKDKKTKKQFILMNTH---FDHVGVTARKESA 170 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 L+ +A+ +P +I GDFN I + + Sbjct: 171 KLMMAKAKEFA--------GNLPLIITGDFNVSETDEAYFTLANSGIVADSYSKIDSRYA 222 Query: 242 DSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ + FS Y GK SDH P+ Sbjct: 223 PNSTFNGFGKSIKPTERIDHIFITPQ---------FSVKKYGILTDTYVGKYPSDHFPVM 273 Query: 300 IDY 302 +D Sbjct: 274 VDL 276 >gi|299145020|ref|ZP_07038088.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_23] gi|298515511|gb|EFI39392.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_23] Length = 289 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 76/313 (24%), Gaps = 36/313 (11%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +RK + L V AQ++ + S+N+ + + + +L + Sbjct: 1 MRKLFIVLALCGVSILN--AQQLNVASYNVRNSNPNDAKAGNG-----WEQRCPVLTRLI 53 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 D DI QE+ + + + I RK Sbjct: 54 TFHDFDIFGAQEVKHNQLEDMLNALPQYSYIGVGRDDGKTKGEYAP------IFYRKDKF 107 Query: 122 RVLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 ++L+ L + A R + K +L Sbjct: 108 KLLKSGNFWLSEDTSKPNKGWDAAYTRICTWGEFKDITGKFRFWFFNLHM---DHIGVVA 164 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----NDDFWKTIDPND 232 S L+ + + + P ++ GDFN Sbjct: 165 RRESAKLVISKIKEMC--------GKDPVILTGDFNVDQTSESYQVLHESGILSDSYEVA 216 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR- 291 L + N N ID+ + +N + R Sbjct: 217 QLRYATNGTCAGWNPNTY--TPNRIDHIFVTKNFAVEKYGVLTDTYRIKNEATGKYEARI 274 Query: 292 LSDHCPISIDYDF 304 SDH P+ + Sbjct: 275 PSDHFPVKAVLKY 287 >gi|333030574|ref|ZP_08458635.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM 18011] gi|332741171|gb|EGJ71653.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM 18011] Length = 288 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 100/314 (31%), Gaps = 38/314 (12%) Query: 2 IRKYVLALVF----FLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 ++KY+L L+ L C +S + ++++++NI + +G W++ ++ + Sbjct: 1 MKKYLLLLMAVSMGLLSACNSSQPKLDLKVMTFNIRLDTSDDGEYSWEHRKEQAGA---- 56 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 AK D D++ QE+ ++ + S+ Sbjct: 57 ---MAKAQDCDLIGTQEVLNHQLEDLKAALPEYEAVGVGRADGKTEGEYSSLLYKKDRFD 113 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + P + + A R A +L++ V I+ Sbjct: 114 ALDSGTFWLSETPEVAGSKGWDGACERVASWVLLKDKETLREVFFINTHL---DHVGVEA 170 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS-LI 235 +LL ++A L P V+ GDFN + + + + Sbjct: 171 RREGVNLLLERAYKLAK--------DAPIVLTGDFNAEPESDVIFNVINPEKERHLLSTH 222 Query: 236 RFPKEKDSRCNANKNLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 +E + + IDY + + Y +K G+ Sbjct: 223 EVAQEVKGTNWTFHDYDRLDINKREYIDYIFVS---------APVTVKSYEVLPMKYEGQ 273 Query: 291 RLSDHCPISIDYDF 304 +SDHCP+ + +F Sbjct: 274 FVSDHCPVVANIEF 287 >gi|257458794|ref|ZP_05623917.1| putative endonuclease/exonuclease/phosphatase [Campylobacter gracilis RM3268] gi|257443782|gb|EEV18902.1| putative endonuclease/exonuclease/phosphatase [Campylobacter gracilis RM3268] Length = 453 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 102/307 (33%), Gaps = 47/307 (15%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSE---------QEGVSLWKNSVKRTTSDYTL 56 VLAL+F + C AS A+ +++ S+N+ L + + S ++ Sbjct: 3 VLALLFAMFFCGASAAE-LKIASFNVQNLFDGVNDGTEYADFEIGRGGWSEQKYERKLQE 61 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + L+ADI+ LQE+ + + + K + + + + +AV Sbjct: 62 IADEISALNADILGLQEIENEAVLKALAQKAGYKFYAFSRAQTAPA----------GVAV 111 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + Q++Y K R + + G +H+ S S Sbjct: 112 MSRIPIKFQKTYRPTELK-------TRDILRADFALGGTDFSFYVVHMLSARNPLSERKR 164 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 ++ + + ++AGDFN ++ + +D Sbjct: 165 N--------------FAFLREVLQGHQRAIVAGDFNTNFGRNSLLNELIERDGFSDLWAL 210 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 P + + ++ + +D+ ++ + + S + + ++ SDH Sbjct: 211 HPCSQLKHFGSCESHESGAVLDHILLSDDFF------SNEPGYKKDSFVVAKSSTASDHF 264 Query: 297 PISIDYD 303 PIS Sbjct: 265 PISFILT 271 >gi|182414598|ref|YP_001819664.1| endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] gi|177841812|gb|ACB76064.1| Endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] Length = 313 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 96/312 (30%), Gaps = 25/312 (8%) Query: 3 RKYVLALVFFLVPCTASV---AQKVRLVSWNINTLSEQEGVSLWKNSV--KRTTSDYTLL 57 R +A + + A + L ++N+ ++ + + L Sbjct: 12 RSLNVAAFWLACVVGVASVLRADSLTLATYNVENYVATNRMTEDGFRRDYPKPEAQKRAL 71 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 R+ +DADIV LQE+G + ++ H+ + D A+ Sbjct: 72 RRVLLAIDADIVVLQEIGDEPYLHELRRDLAKSGL-----DYPHATLLAAADPDRHQALL 126 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN-RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 K + + L + R +E+ V + ++ + +HLKS + Sbjct: 127 SKRPLLAVTPHARLEFPYLGATEAVKRGLLEVRVATSAGELTIFAVHLKSRF---TERAD 183 Query: 177 YSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 S S +A ++D + FVI GDFN + SL Sbjct: 184 DSQSELRRVGEATAIRDVVLARMGDPGNARFVILGDFNDDKASKPVQRLLQRGSVRIASL 243 Query: 235 IRFPKEKDSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + R +D+ ++ + Q + + Sbjct: 244 -LPVSDSRGDTWTYHYRRRDSYTRVDHILVSPALAPAVAQHRAWIADLDGVNE------A 296 Query: 293 SDHCPISIDYDF 304 SDH P+ + DF Sbjct: 297 SDHRPVVVKLDF 308 >gi|256820874|ref|YP_003142153.1| Endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea DSM 7271] gi|256582457|gb|ACU93592.1| Endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea DSM 7271] Length = 274 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 47/302 (15%), Positives = 90/302 (29%), Gaps = 32/302 (10%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++ + L T S+AQ + ++++NI Q+GV+ W + + Sbjct: 1 MKPLLFILCVL---PTFSIAQDLTVMTYNIRCEVPQDGVNAWTDGN-----RKEKVFTVL 52 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + DI +QE + T+ + S Sbjct: 53 TEANPDIFGVQEALPHQLKFLEERFPTYQREGVGRDDGKGAGEHSAIFFKKGRFTLLDKG 112 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 P + + + NR + ++ WV ++H F + S Sbjct: 113 NFWLSQTPEVPSLGWDATCCNRICSWVKLKDKKTIFWVFNLH-----FDHEGKVAQVQSA 167 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 L+ Q+ + + ++ GDFN + + D S Sbjct: 168 DLVLQKIKEIAK--------GGKVILMGDFNLPTEHPAVQKIASQLYDTQLSPTNKTPN- 218 Query: 242 DSRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 NA K K ID+ + Q+S Y + + G SDH P+ + Sbjct: 219 MGTFNAFKTDEPLKGHIDFIFV---------QKSIKVKQYKIIETRIDGLYPSDHLPVWV 269 Query: 301 DY 302 + Sbjct: 270 EL 271 >gi|282878202|ref|ZP_06286998.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] gi|281299620|gb|EFA91993.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] Length = 305 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 35/320 (10%), Positives = 80/320 (25%), Gaps = 34/320 (10%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++KY L L+F + +Q + + ++NI + + ++ Sbjct: 1 MKKYTLTLLFMAI-TLCVSSQNLFVGTYNIRNDNSDDRKEGNA-----WPKRCQVICDMM 54 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 DI QE+ + + + S R Sbjct: 55 NFEQPDIFGTQEVLVGQLRDLKQGLDGYDCIGVGRDDGKEAGEYSAIFYKKDKLKRLDYG 114 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 P A + A R + K+ +L Sbjct: 115 NFWLNETPDKPAL-GWDAACIRICTWGKFQDVKTKLKFYFFNLHMDHVG----------V 163 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + A+ + I + S P ++ GDFN + + + + Sbjct: 164 VARREAAKLVVRKIKEIAGSNAPVILTGDFNVDQHDEIYQIFTQSGLLKDSYTAARMRFA 223 Query: 242 DSRCNANKNLR--NKIPIDYFVMDQNAYKF---LIQESFSEILYNEDDIKSRG------- 289 ++ ID+ + ++ + + + K Sbjct: 224 ENGTFQGFKSSLLTDSRIDHVFVSNKFQVNQYGILTNGYWTEGTSREVSKEGAAPQELNF 283 Query: 290 -----KRLSDHCPISIDYDF 304 + SDH P+ + ++ Sbjct: 284 RQYVHRLPSDHYPVMVKLNY 303 >gi|255692701|ref|ZP_05416376.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides finegoldii DSM 17565] gi|260621535|gb|EEX44406.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides finegoldii DSM 17565] Length = 317 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 40/326 (12%), Positives = 87/326 (26%), Gaps = 37/326 (11%) Query: 1 MIRKYVLALVFFLVPC-----TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55 M K +L + + + S+N+ + + + Y Sbjct: 1 MKLKSLLLITLVTTIVFCGCQSNYQPTTFTVASYNLRNANGNDSLHGNG-----WGQRYP 55 Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 ++ + + D DI QE + + S T Sbjct: 56 VIAKMVQYHDFDIFGTQECFLHQLKDMKEALPGYDYIGVGRDDGKIQGEHSAIFYRTDKF 115 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + P + +K + R + L +L + Sbjct: 116 DIIEKGDFWLSETPDVPSK-GWDAVLPRICSWGHFKCKDTGFEFLFFNLHM---DHIGKK 171 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-TIDPNDSL 234 S L+ ++ + L +P ++ GDFN + N K + + Sbjct: 172 ARVESAYLVQEKMKELGK------GKNLPAILTGDFNVDQTHQSYNAFVEKGVLCDSYEK 225 Query: 235 IRFPKEKDSRCNANKNLRN-KIPIDYFVMDQNAYKFL---------------IQESFSEI 278 F + N+ K ID+ + + +E+ ++ Sbjct: 226 CDFRYATNGTFNSFDPNSFTKSRIDHVFVSPAFHVKRYGILTDTYRSIVGNGEKENANDC 285 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 D + + SDH P+ ++ +F Sbjct: 286 PEEIDIKAYQARTPSDHFPVKVELEF 311 >gi|237715231|ref|ZP_04545712.1| conserved hypothetical protein [Bacteroides sp. D1] gi|237719602|ref|ZP_04550083.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229444540|gb|EEO50331.1| conserved hypothetical protein [Bacteroides sp. D1] gi|229450871|gb|EEO56662.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 314 Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 37/325 (11%), Positives = 87/325 (26%), Gaps = 39/325 (12%) Query: 2 IRKYVLALVFFLVPC---TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 ++ +L + +V C + + + S+N+ + + ++ Y ++ Sbjct: 1 MKNLLLIALVAIVFCGCQSNYQPTSITVASYNLRNANGGDSINGNG-----WGQRYPVIA 55 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Q + D DI QE + + S T Sbjct: 56 QIVQYHDFDIFGTQECFIHQLKDIKEALPGYDYIGVGRDDGKEKGEHSAIFYRTDKFDVI 115 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + P + +K + R + L +L + Sbjct: 116 EKGDFWLSKTPDVPSK-GWDAVLPRICSWGHFKCKDTGFEFLFFNLHM---DHIGKKARV 171 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID----PNDSL 234 S L+ + + L +P ++ GDFN + + K + Sbjct: 172 ESAFLVQDKMKELGK------GKELPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKAGF 225 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL---------------IQESFSEIL 279 + + N ID+ + + ++ ++ Sbjct: 226 RYAINGTFNDFDPNSFTE--SRIDHIFVSPSFQVKRYGVLTDTYRSIVGKGEKKQANDCP 283 Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304 D + + SDH P+ ++ +F Sbjct: 284 EEIDIKTYQARTPSDHFPVKVELEF 308 >gi|160885625|ref|ZP_02066628.1| hypothetical protein BACOVA_03628 [Bacteroides ovatus ATCC 8483] gi|156109247|gb|EDO10992.1| hypothetical protein BACOVA_03628 [Bacteroides ovatus ATCC 8483] Length = 316 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 37/323 (11%), Positives = 90/323 (27%), Gaps = 35/323 (10%) Query: 2 IRKYVLALVFFLVPC---TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 ++ +L + +V C + + + S+N+ + + ++ Y ++ Sbjct: 3 LKNLLLIALVAIVFCGCQSNYQPTSITVASYNLRNANGGDSINGNG-----WGQRYPVIA 57 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Q + D DI QE + + S T Sbjct: 58 QIVQYHDFDIFGTQECFIHQLKDMKEALPGYDYIGVGRDDGKEKGEHSAIFYRTDKFDVI 117 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + P + +K + R + L +L + Sbjct: 118 EKGDFWLSETPDVPSK-GWDAVLPRICSWGHFKCKDTGFEFLFFNLHM---DHIGKKARV 173 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 S L+ + + L +P ++ GDFN + + K + + Sbjct: 174 ESAFLVQDKMKELGK------GKELPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKAGF 227 Query: 239 KEKDSRCNANKNLRNK--IPIDYFVMDQNAYKFL---------------IQESFSEILYN 281 + + N + + ID+ + + ++ ++ Sbjct: 228 RYAINGTFNNFDPNSFTESRIDHIFVSPSFQVKRYGVLTDTYRSIVGKGEKKQANDCPEE 287 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 D + + SDH P+ ++ +F Sbjct: 288 IDIKTYQARTPSDHFPVKVELEF 310 >gi|154149223|ref|YP_001406798.1| putative endonuclease/exonuclease/phosphatase [Campylobacter hominis ATCC BAA-381] gi|153805232|gb|ABS52239.1| putative endonuclease/exonuclease/phosphatase [Campylobacter hominis ATCC BAA-381] Length = 437 Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 100/309 (32%), Gaps = 50/309 (16%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSE-------QEGVSLWKNSVKRTTSDY 54 +RK + L+FF A ++++ ++N+ L + + ++ + Sbjct: 1 MRKILAILLFFTFAF----ASELKIATYNVENLFDAKVQGSEYNDFKNGNWNAEKYSFKL 56 Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 K LDADIV LQE+ ++ + + K+ + + ++ S+ + + Sbjct: 57 EKTVDVLKRLDADIVALQEIENFEVLKDLAQKSGYKFYKFSK---------SDKNSPFGV 107 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 AV + YP +R + G+ + + Sbjct: 108 AVLSRIKIKDTIFYPPP------LNIKSRDILRCDFTFEGENFSIFV----------NHF 151 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + S A L + K V+ GDFN +D + D Sbjct: 152 LAKKNAYSKRIANATQLSSVLRNVKN----VVVLGDFNTNYGSDSLLNDIINRYNLVDLW 207 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 P + + ++ ID+ ++ Q+ + + ++ + + + SD Sbjct: 208 KFLPSIER------ISHQSGRAIDHILLSQDFF-KNVTLNYKDESFGV---FDENFKNSD 257 Query: 295 HCPISIDYD 303 H PI Sbjct: 258 HLPIFFTIS 266 >gi|29348040|ref|NP_811543.1| hypothetical protein BT_2630 [Bacteroides thetaiotaomicron VPI-5482] gi|260172059|ref|ZP_05758471.1| hypothetical protein BacD2_09356 [Bacteroides sp. D2] gi|293371640|ref|ZP_06618051.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|315920369|ref|ZP_07916609.1| conserved hypothetical protein [Bacteroides sp. D2] gi|29339942|gb|AAO77737.1| conserved hypothetical protein with endonuclease/exonuclease/phosphatase family domain [Bacteroides thetaiotaomicron VPI-5482] gi|292633337|gb|EFF51907.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|313694244|gb|EFS31079.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 316 Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats. Identities = 37/325 (11%), Positives = 87/325 (26%), Gaps = 39/325 (12%) Query: 2 IRKYVLALVFFLVPC---TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 ++ +L + +V C + + + S+N+ + + ++ Y ++ Sbjct: 3 LKNLLLIALVAIVFCGCQSNYQPTSITVASYNLRNANGGDSINGNG-----WGQRYPVIA 57 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Q + D DI QE + + S T Sbjct: 58 QIVQYHDFDIFGTQECFIHQLKDMKEALPGYDYIGVGRDDGKEKGEHSAIFYRTDKFDVI 117 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + P + +K + R + L +L + Sbjct: 118 EKGDFWLSETPDVPSK-GWDAVLPRICSWGHFKCKDTGFEFLFFNLHM---DHIGKKARV 173 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID----PNDSL 234 S L+ + + L +P ++ GDFN + + K + Sbjct: 174 ESAFLVQDKMKELGK------GKELPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKAGF 227 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL---------------IQESFSEIL 279 + + N ID+ + + ++ ++ Sbjct: 228 RYAINGTFNDFDPNSFTE--SRIDHIFVSPSFQVKRYGVLTDTYRSIVGKGEKKQANDCP 285 Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304 D + + SDH P+ ++ +F Sbjct: 286 EEIDIKTYQARTPSDHFPVKVELEF 310 >gi|325915043|ref|ZP_08177372.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937] gi|325538741|gb|EGD10408.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937] Length = 288 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 78/297 (26%), Gaps = 29/297 (9%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 L L A+ + +R++S+N+ V + + KR + + D Sbjct: 19 VLCIVLPALAATPSAPLRVMSFNVR-------VPVDTDGDKRWQVRRDAMVALIRQTHPD 71 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 + QE+ A T+ F + + ++ Sbjct: 72 VFGTQELVQEQAQYLATHLPTYRWFGKGRNADG-GGEHMGVFYDSRVLTVVESGDFWLSE 130 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 P S+ R L E G K + Q Sbjct: 131 TPGTPGSSSWGTDLPRLVTWALFERRGDKRRFYLFNTHLPHRDQDEPARE---------Q 181 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 A L K + +P V+ GDFN + + + Sbjct: 182 AARLILSRIAKLPADIPVVLTGDFNSDPDKSTY--PTLTAALGDARTHAPKRNGPENTFQ 239 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + ID+ + + + D + G SDH P+ ++D+ Sbjct: 240 DFSTHPTRRIDWILFRG----------LTPTRFTTLDERPGGILPSDHYPVLAEFDW 286 >gi|120553053|ref|YP_957404.1| endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8] gi|120322902|gb|ABM17217.1| Endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8] Length = 586 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 79/311 (25%), Gaps = 27/311 (8%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQYAKNLDADIV 69 +R+++ N+ +G + ++ + L + ++ DI+ Sbjct: 273 APTKSTDSIRIMTLNLQNYFNGDGQGKGFPTPRGASSLEQFQTQNRKLARTIQDAHPDIL 332 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 + E+ + + ++ RD N+ I TA+ R+ V + + P Sbjct: 333 AVTELENDGYGPDSAAAGLARTLGADWAVVQTPGRDGNDAIRTALLYRESRV---RPTGP 389 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS--------C 181 +R + G ++ + Sbjct: 390 AYRPGPGELPGASRPPLAQAFRARGSELTFWVVVPHLKSKSCRHAAAREQDQGDGQGCYN 449 Query: 182 SLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + A + W+ P +I GD N Sbjct: 450 RQRTLSANAIVIWLQALAGDPETTPVLITGDLNSYAREAPVERFQEAGFTSLVHQYYPCL 509 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG--------KR 291 + K +DY + ++ Q I +E S R Sbjct: 510 PMQCEHYTYRYQGQKGTLDYALASPALMPWIEQAQIWNINADEPRALSYRQTPDQSGPWR 569 Query: 292 LSDHCPISIDY 302 SDH P+ D Sbjct: 570 SSDHNPVLTDL 580 >gi|262405075|ref|ZP_06081625.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294643581|ref|ZP_06721385.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294808680|ref|ZP_06767414.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|262355950|gb|EEZ05040.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292641076|gb|EFF59290.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294444119|gb|EFG12852.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] Length = 316 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 37/325 (11%), Positives = 87/325 (26%), Gaps = 39/325 (12%) Query: 2 IRKYVLALVFFLVPC---TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 ++ +L + +V C + + + S+N+ + + ++ Y ++ Sbjct: 3 LKNLLLIALVAIVFCGCQSNYQPTSITVASYNLRNANGGDSINGNG-----WGQRYPVIA 57 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Q + D DI QE + + S T Sbjct: 58 QIVQYHDFDIFGTQECFIHQLKDIKEALPGYDYIGVGRDDGKEKGEHSAIFYRTDKFDVI 117 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + P + +K + R + L +L + Sbjct: 118 EKGDFWLSKTPDVPSK-GWDAVLPRICSWGHFKCKDTGFEFLFFNLHM---DHIGKKARV 173 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID----PNDSL 234 S L+ + + L +P ++ GDFN + + K + Sbjct: 174 ESAFLVQDKMKELGK------GKELPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKAGF 227 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL---------------IQESFSEIL 279 + + N ID+ + + ++ ++ Sbjct: 228 RYAINGTFNDFDPNSFTE--SRIDHIFVSPSFQVKRYGVLTDTYRSIVGKGEKKQANDCP 285 Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304 D + + SDH P+ ++ +F Sbjct: 286 EEIDIKTYQARTPSDHFPVKVELEF 310 >gi|188584031|ref|YP_001927476.1| endonuclease/exonuclease/phosphatase [Methylobacterium populi BJ001] gi|179347529|gb|ACB82941.1| Endonuclease/exonuclease/phosphatase [Methylobacterium populi BJ001] Length = 283 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 41/287 (14%), Positives = 82/287 (28%), Gaps = 41/287 (14%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + ++ +RL+++N+ +G + + L+ DIV LQE+ Sbjct: 27 PAGSRPLRLLTYNVRHCRGTDGRVAP-----------ERVARVIAALEPDIVALQEVDVG 75 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A + H + A+ L+++ L G Sbjct: 76 RARTGGLDQAEAIARLVGMSSHFHPALHV-EEERYGDALLTHLPSRLRRADALPGLVRRP 134 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWI 195 R A+ + + ++ VL H + QA+ L DW+ Sbjct: 135 G-LEPRGALWAEITVGTARLQVLTTHFGLLG-------------AERIAQAEALLGPDWL 180 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 P V+ GDFN + + L + + + + + Sbjct: 181 -GDPACREPVVLLGDFNATGWSRAYRR-LGRRLTDARRLTGERRWRRGTA-SFPSRLPLL 237 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ + + I + SDH P+ + Sbjct: 238 RIDHVFVSEGVRVDRIAV----------VDTPLARLASDHLPVLAEI 274 >gi|289663955|ref|ZP_06485536.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667545|ref|ZP_06488620.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 288 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 48/301 (15%), Positives = 99/301 (32%), Gaps = 33/301 (10%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 +LAL L AS +R++S+N+ V + ++ KR T + K Sbjct: 17 ILALCITLPAFAASAPSPLRVMSFNVR-------VPVDRDGDKRWAVRRTSMVALIKQTH 69 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 D+ QE+ A + F R + A++V + L Sbjct: 70 PDVFGTQELVQEQAQYLASHLPAYRWFGKGRRADGSEEHMGVFYDSNALSVIESGDFWL- 128 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 P + S++ R L E + ++ ++L+ HL + Sbjct: 129 SETPEVPGSSSWNTDLPRMVTWALFERRSDKRRFYLLNTHLPH----------RDQDEAA 178 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 Q A+ + I + +P V+ GDFN + + + + Sbjct: 179 REQGARVILSRIAT-LPADIPVVVTGDFNSDPDQGTYR--TLTAVLGDARAHVAKPQGPE 235 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + ID+ + + ++ D++ G SDH P+ +++ Sbjct: 236 KTFQDFTTQPTRRIDWILFRG----------LTPTRFSTLDMRPGGILPSDHYPVLAEFE 285 Query: 304 F 304 + Sbjct: 286 W 286 >gi|228990178|ref|ZP_04150148.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM 12442] gi|228769541|gb|EEM18134.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM 12442] Length = 788 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 87/313 (27%), Gaps = 49/313 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYN- 78 K+ + ++NI S + + + + K DI+ +QEM N Sbjct: 489 GKLTVATYNIENFSAN--------AKETSDEKVKAIAYSIKYNLKMPDIIGVQEMQDNNG 540 Query: 79 -----------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + + N +I V Sbjct: 541 SINDGTTDASLSAKRIIDAVQEIRGPKYEYVEVA-PQNNQDGGAPGANIRVGFFYNPSRV 599 Query: 122 RVLQQS-----YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 ++ + P +++ R+ + G+ I V+ HL S + Sbjct: 600 KLADKPKLLETNPTRIGQENSLFDNTRKPLAAEFTFQGQNIVVVSNHLNSKLGDATPFGK 659 Query: 177 YS----PSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDP 230 S Q AQ +++ + ++ P VI GD N + + Sbjct: 660 IQPLVLKSEEKRIQLAQEANNFVKEIQKRDVNAPVVIVGDMNDFEFSKP-----LQALKA 714 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + N +D+ ++ N + + ++ +I Sbjct: 715 ENMQDMLETVSKENRYTYIHDGNAQVLDHILVTNNIA----PHTVVDPVHLNSNIMKEHG 770 Query: 291 RLSDHCPISIDYD 303 R+SDH P+ D Sbjct: 771 RVSDHDPVLAQID 783 >gi|228996264|ref|ZP_04155909.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17] gi|229003931|ref|ZP_04161737.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4] gi|228757300|gb|EEM06539.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4] gi|228763456|gb|EEM12358.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17] Length = 788 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 87/313 (27%), Gaps = 49/313 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYN- 78 K+ + ++NI S + + + + K DI+ +QEM N Sbjct: 489 GKLTVATYNIENFSAN--------AKETSDEKVKAIAYSIKYNLKMPDIIGVQEMQDNNG 540 Query: 79 -----------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + + N +I V Sbjct: 541 SINDGTTDASLSAKRIIDAVQEIRGPKYEYVEVA-PQNNQDGGAPGANIRVGFFYNPSRV 599 Query: 122 RVLQQS-----YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 ++ + P +++ R+ + G+ I V+ HL S + Sbjct: 600 KLADKPKLLETNPTRIGQENSLFDNTRKPLAAEFTFQGQNIVVVSNHLNSKLGDATPFGK 659 Query: 177 YS----PSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDP 230 S Q AQ +++ + ++ P VI GD N + + Sbjct: 660 IQPLVLKSEEKRIQLAQEANNFVKEIQKRDVNAPVVIVGDMNDFEFSKP-----LQALKA 714 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + N +D+ ++ N + + ++ +I Sbjct: 715 ENMQDMLETVSKENRYTYIHDGNAQVLDHILVTNNIA----PHTVVDPVHLNSNIMKEHG 770 Query: 291 RLSDHCPISIDYD 303 R+SDH P+ D Sbjct: 771 RVSDHDPVLAQID 783 >gi|218437404|ref|YP_002375733.1| endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424] gi|218170132|gb|ACK68865.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424] Length = 1073 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 36/312 (11%), Positives = 90/312 (28%), Gaps = 41/312 (13%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 ++ + S+N+ L + + R T+ + K DI+ LQE+ Sbjct: 627 TPTTDQLTVASYNVENLDPNDNDGDTDIADGRFTAIAEQIVNNLKT--PDIIALQEVQDN 684 Query: 78 NA----------------VAKVFPKNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKN 120 + + + ++ + + S +I Sbjct: 685 DGSVNSNIVDASLTYQTLIDAIVDAGGPRYEFADIPPIDDQSGGQPGANIRVGYLYNPNR 744 Query: 121 VRVLQQ---SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 V ++++ D + +R + N +++ +++ H S L + Sbjct: 745 VDLIEESLTRIEDPNLADGNAFENSRNPLAATFVFNEQEVTLVNNHFASKGGSSPLFGSV 804 Query: 178 SP----SCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 P S +QAQ + ++++ ++ GD N + I Sbjct: 805 QPPINGSVDQRIEQAQVVNNFVSNILGSNPDANAIVLGDLNEFQFFSPLE------ILQQ 858 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 ++ + N +D+ ++ N + + Sbjct: 859 TLNNLTFSLPENERYSYIFEGNSQQLDHILVSDNLLNSAEFDIVHI-------NSQFADQ 911 Query: 292 LSDHCPISIDYD 303 SDH P+ ++ Sbjct: 912 TSDHDPLLARFN 923 >gi|299147485|ref|ZP_07040550.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] gi|298514763|gb|EFI38647.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] Length = 316 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 37/325 (11%), Positives = 88/325 (27%), Gaps = 39/325 (12%) Query: 2 IRKYVLALVFFLVPC---TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 ++ +L + +V C + + + S+N+ + + ++ Y ++ Sbjct: 3 LKNLLLIALVAIVFCGCQSNYQPTSITVASYNLRNANGGDSINGNG-----WGQRYPVIA 57 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Q + D DI QE + + S T Sbjct: 58 QIVQYHDFDIFGTQECFIHQLKDMKEALPGYDYIGVGRDDGKEKGEHSAIFYRTDKFDVI 117 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + P + +K + R + L +L + Sbjct: 118 EKGDFWLSETPDVPSK-GWDAVLPRICSWGHFKCKDTGFEFLFFNLHM---DHIGKKARV 173 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID----PNDSL 234 S L+ + + L +P ++ GDFN + + K + Sbjct: 174 ESAFLVQDKMKELGK------GKELPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKAGF 227 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL---------------IQESFSEIL 279 + + N ID+ + + + ++ ++ Sbjct: 228 RYAINGTFNDFDPNSFTE--SRIDHIFVSPSFHVKKYGVLTDTYRSIVGKGEKKQANDCP 285 Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304 D + + SDH P+ ++ +F Sbjct: 286 EEIDIKTYQARTPSDHFPVKVELEF 310 >gi|172039538|ref|YP_001806039.1| hypothetical protein cce_4625 [Cyanothece sp. ATCC 51142] gi|171700992|gb|ACB53973.1| hypothetical protein cce_4625 [Cyanothece sp. ATCC 51142] Length = 1252 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 42/326 (12%), Positives = 88/326 (26%), Gaps = 50/326 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY---- 77 + + ++N+ L + + R + + + DI+ LQE+ Sbjct: 801 DNLTIATYNVLNLDPNDNDGDTDVADGRFDTIAQQIINNLNS--PDIIGLQEIQDNSGSV 858 Query: 78 --------NAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 + ++ + +T N S +I TA V V Sbjct: 859 DDGTVSADQTLQRLVDAIVDAGGPQYEFIDNTFITNNQSGGQPGGNIRTAYLYDPNQVSV 918 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP---- 179 P+ G R + + E G+ + V++ H S + Sbjct: 919 ASVQ-PIGSQVSGEPFNGARLPLAVDFEFQGEIVTVINNHFSSKGGSAPIFGVEQDFAAR 977 Query: 180 --------SCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNNDDFWKTID 229 S + +QAQ + D++ + V+ GD N Sbjct: 978 QEDITVNGSLNERREQAQAVNDFVDGVLSNDPNGNVVVLGDLNEFEFVSPLPILEGTLES 1037 Query: 230 PNDSLIRFPKE-----------KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 N+ + + N +D+ ++ + + Sbjct: 1038 TNNGQETITGGDAVLSNLVNNIAEDERYSFIFQGNSQQLDHILVSDSL---FNNAEIDIV 1094 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 N + + SDH P+ + F Sbjct: 1095 NINSEFAATESL-ASDHDPVLASFTF 1119 >gi|323497286|ref|ZP_08102305.1| metal-dependent hydrolase [Vibrio sinaloensis DSM 21326] gi|323317643|gb|EGA70635.1| metal-dependent hydrolase [Vibrio sinaloensis DSM 21326] Length = 232 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 56/246 (22%), Positives = 104/246 (42%), Gaps = 22/246 (8%) Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 + +D++ QE+ A+ KV K +F + + KR + + T +A++ Sbjct: 1 MQSDVLAFQEVNDEAALQKVIGKGYDIVFSDRTQERHTEKRFHDINQFTGVAIKHGI--- 57 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCS 182 D S + R A ++++ N + I +L +HLK+ C S + C Sbjct: 58 -SWQNMPDVLLDQRSNSKLRFATYVVIQPNSERPIHLLSVHLKARC---SGAYKNNRDCR 113 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 +L QQ + L WI +K+ + +VI GDFN ++Y ND W T+ ++ + Sbjct: 114 ILKQQGERLNQWINEKEVANQAYVILGDFNHNLSY--PNDWLWNTLTQSNRAQLATQRTR 171 Query: 243 SRCN------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + C NK + ID+ ++ + + + +Y + +LSDHC Sbjct: 172 AECKVRSRKQPNKTHSFRSLIDHIIVS----DQIKLSAPKQDVYPSQQVLK--HQLSDHC 225 Query: 297 PISIDY 302 PI+ Sbjct: 226 PITAQL 231 >gi|90409692|ref|ZP_01217709.1| hypothetical protein P3TCK_02976 [Photobacterium profundum 3TCK] gi|90329045|gb|EAS45302.1| hypothetical protein P3TCK_02976 [Photobacterium profundum 3TCK] Length = 292 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 90/310 (29%), Gaps = 25/310 (8%) Query: 1 MIRKY-VLALVFFLVPCT-ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 M + +L L + + ++A ++S+N+ S+ + + ++ Sbjct: 1 MKKNVSLLTLSLLAISGSLPAIADDFNVMSFNVRN-SKDSVSGSIYDGNNTWENRKKIVT 59 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + + DI LQE S + + N + V+ Sbjct: 60 SIFHDQNIDIAGLQEPFSDQIMYLARNLPEYSWVGVGRDDGNAKGEAVPIFYRSDKYVKL 119 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 P L A + R + + +E G VL + F + Sbjct: 120 SGGTFWLSKTPELVASIGWDAELTRISTWVRLEEKGTGKRVLVFNSH---FDHIGKVARQ 176 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 S L+S +A+ + + ++ GD N + + + + + P Sbjct: 177 ESAKLMSDRAKEIIG------DGNDAVIVLGDLNFERTDTVSYHAITNLFNDAREITKAP 230 Query: 239 KEKDSRCNANKNLRNKIP----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + A IDY ++ + + + ++ G SD Sbjct: 231 FKGADNGKAYTYHGYGNAPSEDIDYIFVNDSL---------TVNTFEYKNVIRDGIYSSD 281 Query: 295 HCPISIDYDF 304 H + + F Sbjct: 282 HLSVISNMSF 291 >gi|218460813|ref|ZP_03500904.1| putative metal-dependent hydrolase protein [Rhizobium etli Kim 5] Length = 242 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 36/285 (12%), Positives = 83/285 (29%), Gaps = 49/285 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + ++L+++N+++ + D + ADI+ LQE+ Sbjct: 4 KSIKLLTYNVHSCIGNDR-----------KLDPGRIASVIAEAGADIIALQEVDVLRRRT 52 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + H + + A+ ++ PL Sbjct: 53 GGVDQAHLIASLLKMQAHFHPALSVAEEQY-GDAIITALPTAAVKAGPLPSIG------E 105 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD--WITQKK 199 R A+ + V + +K+ V++ HL +Q L + W+ K Sbjct: 106 QRGALSVEVLVGDRKLLVVNTHLGLRGRD-------------RIRQMTTLLNSGWLRGTK 152 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 + +P ++ GDFN + + K + + + +D+ Sbjct: 153 DEPLPCILCGDFNAIPSSATYR------LATRSLKDALLGGKAAPRATFPSRYPLMRLDH 206 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + + SDH P+ + F Sbjct: 207 IFVTDDL----------VVQRATVLQNRLTRVASDHLPLFAEISF 241 >gi|163853725|ref|YP_001641768.1| endonuclease/exonuclease/phosphatase [Methylobacterium extorquens PA1] gi|163665330|gb|ABY32697.1| Endonuclease/exonuclease/phosphatase [Methylobacterium extorquens PA1] Length = 328 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 81/289 (28%), Gaps = 41/289 (14%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 ++ ++++RL+++N+ +G + + L DIV LQE+ Sbjct: 74 PASAASRRLRLLTYNVRHCRGTDGRVAP-----------ERVARVIAALAPDIVALQEVD 122 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + H + AV L+++ PL G Sbjct: 123 VGRPRTDGLDQAEEIARLVGMFSHFHPALHI-EEERYGDAVLTHLPSRLKRAGPLPGLLR 181 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--D 193 R A+ + V K+ V+ H + QA+ L D Sbjct: 182 RPG-LEPRGALWVEVTAGASKLQVITTHFGLLG-------------AERVAQAKALLGPD 227 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 W+ P V+ GDFN + D + ++ Sbjct: 228 WL-GDPACHAPTVLLGDFNAMGWSRAYRRLSGRLTDARRLTGDRRWRRGGATFPSRFPLL 286 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D+ + + I ++ SDH P+ + Sbjct: 287 --RVDHVFVSERVAVERIAV----------VDTPLARKASDHLPVLAEI 323 >gi|152974643|ref|YP_001374160.1| endonuclease/exonuclease/phosphatase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023395|gb|ABS21165.1| Endonuclease/exonuclease/phosphatase [Bacillus cytotoxicus NVH 391-98] Length = 790 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 90/313 (28%), Gaps = 49/313 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYN- 78 +V + ++N+ S + + + L K DI+ +QEM N Sbjct: 489 GRVTVATYNMENFSANQ--------KETSDEKVKALAYSIKYNLKMPDIIGVQEMQDNNG 540 Query: 79 -----------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + + L N +I V Sbjct: 541 TINDGTTDASLSAKRIIDAVQAIHGPKYEYVEVA-PLNNQDGGAPGANIRVGFFYNSSRV 599 Query: 122 RVLQQS-----YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 ++ Q P +D+ R+ + G+ + V+ HL S + Sbjct: 600 KLADQPKLLETNPTRIGQDNPLFESTRKPLAAEFTFQGQHLVVISNHLNSKIGDAPPFGS 659 Query: 177 YS----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 S Q AQ + ++ QK+++ P V+ GD N + + Sbjct: 660 IQPLVWKSEEKRVQLAQEVNRFVKGIQKRDANAPVVVVGDMNDFEFSKP-----LQALKG 714 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + N +D+ ++ N + + ++ ++ Sbjct: 715 DTLQNMLETVSKENRYTYIHEGNAQVLDHILVTNNIA----NHTIVDPVHLNTNMMKEHG 770 Query: 291 RLSDHCPISIDYD 303 R+SDH P+ D Sbjct: 771 RVSDHDPVLAQID 783 >gi|78045838|ref|YP_362013.1| putative extracellular nuclease [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034268|emb|CAJ21913.1| putative extracellular nuclease [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 572 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 91/324 (28%), Gaps = 35/324 (10%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60 L L V +R+ S+N+ G + ++ + L Sbjct: 256 LTLPAMPTAVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 315 Query: 61 AKNLDADIVFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 LDAD+ L E+ + AV+++ + ++ ++ I I Sbjct: 316 IVPLDADVAALMEVENDGNGADAAVSQLVAALNAAGKDKDWQFVDTGSGPGDDAIRVGIL 375 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKS-FCFLDSL 173 R V + + L G +R + G V+ H KS C S Sbjct: 376 YRSSQVTPVGKPATLTGGPFENH---SRVPLAQAFRSARGATFVVVANHFKSKGCGNASG 432 Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWK 226 + A+ L W+ V+ GDFN + Sbjct: 433 ADADQQDGQACWNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYAMEMPMRS---- 488 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + + F + + +D+ ++ K L + I + D Sbjct: 489 -LRASGWQDAFAVAGVKQPYSYVYDGLSGRLDHALLSPAMAKQLRGAAEWHINADVMDDA 547 Query: 287 SRG-------KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 548 GYAKRNLPGPWRSSDHDPVLLGFS 571 >gi|218532583|ref|YP_002423399.1| endonuclease/exonuclease/phosphatase [Methylobacterium chloromethanicum CM4] gi|218524886|gb|ACK85471.1| Endonuclease/exonuclease/phosphatase [Methylobacterium chloromethanicum CM4] Length = 328 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 84/289 (29%), Gaps = 41/289 (14%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 ++ ++++RL+++N+ +G + + +L DIV LQE+ Sbjct: 74 PASAASRRLRLLTYNVRHCRGTDGRVAP-----------ERVARVIADLAPDIVALQEVD 122 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + H + AV L+++ PL G Sbjct: 123 VGRPRTDGLDQAEEIARLVGMFSHFHPALHI-EEERYGDAVLTHLPSRLKRAGPLPGLLR 181 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--D 193 R A+ + V K+ V+ H + QA+ L D Sbjct: 182 RPG-LEPRGALWVEVTAGASKLQVITTHFGLLG-------------AERVAQAKALLGPD 227 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 W+ P V+ GDFN + + L + + + Sbjct: 228 WL-GDPACHAPTVLLGDFNATGWSRAYRRLSGR-LTDARRLTGERRWRRGGA-TFPSRFP 284 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D+ + + I ++ SDH P+ + Sbjct: 285 LLRVDHVFVSERVAVERIAV----------VDTPLARKASDHLPVLAEI 323 >gi|299534838|ref|ZP_07048167.1| endonuclease yhcR precursor [Lysinibacillus fusiformis ZC1] gi|298729683|gb|EFI70229.1| endonuclease yhcR precursor [Lysinibacillus fusiformis ZC1] Length = 1375 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 45/328 (13%), Positives = 83/328 (25%), Gaps = 60/328 (18%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMG 75 VA K+ + S+NI S + + N DI+ L E+ Sbjct: 944 EPVADKLNVASYNIENFSNNPANTSN--------EKVARIAATFVNNMKSPDIITLVEVQ 995 Query: 76 SYNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + K + + N +I Sbjct: 996 DNDGQTDSGNADASESYMRLIHAIKAAGGPAYDW-IDVMPINNTVGGAPGGNIRVGYLYN 1054 Query: 118 KKNVRVLQ----------------QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 V ++ G D R+ + E +++ ++ Sbjct: 1055 PNRVSLVSGIKGMGDQTNTWTADGSLTLNPGFVDPSKFVDTRKPIAAEFEFQKERVVIIG 1114 Query: 162 IHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215 HL S SL S Q AQ + D+I + + ++AGD N Sbjct: 1115 AHLNSKGGDGSLWGPTQPPVLESVKKRIQLAQAINDFIDEGLAINPDLNIIVAGDMNDF- 1173 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 +T+ + K + N +D+ ++ + Sbjct: 1174 ----EFTPALQTLKGDVLTNMIDKAPEQDRFTYFFQGNNQVLDHILVSNKLADVTEIDLI 1229 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 + R SDH P+ + D Sbjct: 1230 HI----NANFTEAQGRASDHDPVLVQID 1253 >gi|294627625|ref|ZP_06706207.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666886|ref|ZP_06732117.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292597977|gb|EFF42132.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603334|gb|EFF46754.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 287 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 89/300 (29%), Gaps = 34/300 (11%) Query: 8 ALVFFLVPCTA-SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 AL+ +P A + A +R++S+N+ V + KR + K Sbjct: 17 ALLCIALPALAGTPAAPLRVMSFNVR-------VPADTDGDKRWQVRRAAMVALIKQTHP 69 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D+ QE+ S A + F R + + + ++ Sbjct: 70 DVFGTQELVSEQAAFLAEQLPDYRWFGQGRRGDDSDEHM-GVFYDARVLEVVESGNFWLS 128 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 P ++ R A L E + ++ ++ + H D E S L+ Sbjct: 129 DTPERAGSITWGNVLPRMATWALFERRSDKRRFYLFNTHFPYR---DEDEPARERSARLI 185 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + L + +P V+ GDFN + + + + Sbjct: 186 LSRIAQL--------PATIPVVLTGDFNSDPD--KITYPTLTAVLRDARAQASKRSGPEN 235 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + ID+ + + D + G SDH P+ ++D+ Sbjct: 236 TFQDFTTHPTRRIDWILYRG----------LRPSRFATLDDRPGGILPSDHYPVMAEFDW 285 >gi|332709465|ref|ZP_08429426.1| putative extracellular nuclease [Lyngbya majuscula 3L] gi|332351724|gb|EGJ31303.1| putative extracellular nuclease [Lyngbya majuscula 3L] Length = 713 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 90/313 (28%), Gaps = 34/313 (10%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + S A ++ + S+N+ L + + L ++ DI+ LQE Sbjct: 254 ITNLVSSANQLTIASFNVENLDPNSQDGDDDIGDGKFNAIAFQLINNLQS--PDIIALQE 311 Query: 74 MGSYNAV-----------------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + N A V F+ + +I Sbjct: 312 VQDNNGTIDNGNVDARETYETLINAIVAAGGPQYSFFDIPPVDRQDGGQPGGNIRVGYLY 371 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 V + S +G ++ R+++ E NG+ I V++ H S D L Sbjct: 372 NPNRVTINTDSAQRIGVGETAFDN-TRKSLLTEFEFNGETISVINNHFSSKGGSDPLFGE 430 Query: 177 YSP----SCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 P +QQAQ + D++ + ++ GDFN K Sbjct: 431 NQPPQNGQEQKRNQQAQIVNDFVDTILTNDPDANVLVLGDFNTFDFEEPLE--TLKGYHN 488 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + N +D+ ++ + + + Sbjct: 489 SVLTNLTETLPEDERYTFIFEGNSQALDHILVSDHLVDAGAEYDIVHVN------SEFAD 542 Query: 291 RLSDHCPISIDYD 303 + SDH PI + Sbjct: 543 QASDHDPILARFT 555 >gi|213962631|ref|ZP_03390892.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sputigena Capno] gi|213954626|gb|EEB65947.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sputigena Capno] Length = 274 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 90/302 (29%), Gaps = 32/302 (10%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +++ + L +VAQ + ++++NI + +GV+ W + Sbjct: 1 MKQLLFILCIL---PALTVAQNLSVMTYNIRYDNSYDGVNSWTEGN-----RKEKVFTII 52 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + + DI +QE ++ ++ + S V Sbjct: 53 NDANPDIFGVQEALAHQLKFLEERFPSYQREGVGRDDGKEAGEHSAIFFKKNRFVLLDKG 112 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 P + + + NR + ++ WV ++H F + S Sbjct: 113 NFWLSQTPDVPSLGWDAICCNRICSWVKLKDKKTIFWVFNLH-----FDHEGKVAQIQSA 167 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 L+ ++ + + ++ GDFN + + D S Sbjct: 168 DLVLRKIKEIAK--------NGKVILMGDFNLPTEHPAVQKIASQLYDTQLSPTNKTPN- 218 Query: 242 DSRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 NA K K ID+ + Q+S Y + + SDH P+ + Sbjct: 219 MGTFNAFKTDEPLKGHIDFIFV---------QKSIKVKQYKIIETRIDSLYPSDHLPVWV 269 Query: 301 DY 302 Sbjct: 270 QL 271 >gi|32475548|ref|NP_868542.1| hypothetical protein RB8783 [Rhodopirellula baltica SH 1] gi|32446090|emb|CAD75919.1| conserved hypothetical protein [Rhodopirellula baltica SH 1] Length = 321 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 87/288 (30%), Gaps = 32/288 (11%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + +++NI L+ + L R + + AD+V LQE+ Sbjct: 60 ADESFTAMTYNIRYLNTHDRQDL---WSMRRSKVIETIAS------ADVVGLQEVTVQQL 110 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 W + + + + P + + Sbjct: 111 HDIQEGTPEWTWYGVGRDDGKEGGEFAPIGYRHDRFEAMDHGTLWLSETPTVVGSKGWDA 170 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 A R +++ +K+ + + + F +N S L++ + + Sbjct: 171 ALPRTMTWMVLR---RKLDRAEFLVINSHFDHRGQNAREQSGRLVAAEVDQ--------R 219 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + +P ++ GDFN + K +D D + P N K ++ Sbjct: 220 ATDLPVIVMGDFNAMPDSAPLKALQSGEKVKLLDARDEVDGKPTGPTGTWNGFKAIQPDR 279 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID+ +++ + D G+ SDH PI+I D Sbjct: 280 RIDHVLVNDRV--------VVQEYRTLDPRTEAGRYASDHLPIAIRID 319 >gi|295088164|emb|CBK69687.1| Metal-dependent hydrolase [Bacteroides xylanisolvens XB1A] Length = 316 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 37/325 (11%), Positives = 89/325 (27%), Gaps = 39/325 (12%) Query: 2 IRKYVLALVFFLVPC---TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 ++ +L + +V C + + + S+N+ + + ++ Y ++ Sbjct: 3 LKNLLLIALVAIVFCGCQSNYQPTSITVASYNLRNANGGDSINGNG-----WGQRYPVIA 57 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Q + D DI QE + ++ S T Sbjct: 58 QIVQYHDFDIFGTQECFIHQLKDMKEALPSYDYIGVGRDDGKEKGEHSAIFYRTDKFDVI 117 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + P + +K + R + L +L + Sbjct: 118 EKGDFWLSETPDVPSK-GWDAVLPRICSWGHFKCKDTGFEFLFFNLHM---DHIGKKARV 173 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID----PNDSL 234 S L+ + + L +P ++ GDFN + + K + Sbjct: 174 ESAFLVQDKMKELGK------GKELPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKAGF 227 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL---------------IQESFSEIL 279 + + N ID+ + + + ++ ++ Sbjct: 228 RYAINGTFNDFDPNSFTE--SRIDHVFVSPSFHVKKYGVLTDTYRSIVGKGEKKQANDCP 285 Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304 D + + SDH P+ ++ +F Sbjct: 286 EEIDIKTYQARTPSDHFPVKVELEF 310 >gi|319785687|ref|YP_004145162.1| endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis 11-1] gi|317464199|gb|ADV25931.1| Endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis 11-1] Length = 575 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 97/315 (30%), Gaps = 33/315 (10%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDADI 68 P V +++ ++N+ L +G + + + L LD DI Sbjct: 267 PQPPRVPGTLKVAAFNLENLFNGDGRGGGFPTKRGARTHAAMQAQLAKLVATVHGLDPDI 326 Query: 69 VFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 L E+ + +++A++ + R ++ + I + R V Sbjct: 327 AALMELENDGYGPESSIAQLVDALNADG--AQWRFVDAGHGPGGDTIRVGLIYRADRVVA 384 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP---- 179 + L G R+ A + + + + V+ HLKS ++ Sbjct: 385 RGEPAVLEGGPFG-ERSRVPLAQAFVRKGGKRDLVVVANHLKSKGCSEATGADADRGDGQ 443 Query: 180 --SCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 +L + A+ L W+ V+ GDFN D + Sbjct: 444 GCWNALRTDSARRLHAWLKTHPVGSRAGRVVMLGDFNA----YAMEDPLHWLRSEGGWVD 499 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289 F R + +D+ ++ + L + + +E D Sbjct: 500 AFAAAGIERPWSYVYDGLSGRLDHALLSPSLVPALRGAAEWHVNADEPDDAGYAGRNEPG 559 Query: 290 -KRLSDHCPISIDYD 303 R SDH P+ + +D Sbjct: 560 PWRSSDHDPLLLGFD 574 >gi|94994049|ref|YP_602147.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS10750] gi|94547557|gb|ABF37603.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS10750] Length = 910 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 90/323 (27%), Gaps = 59/323 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80 K+ + S+NI S + + + + +L+ DI+ L E+ N Sbjct: 548 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 599 Query: 81 A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 K T+ + N +I T + + V Sbjct: 600 TDDGTTDATQSAQRLIDAIKKLGGPTYR-YADIAPENNVDGGQPGGNIRTGFLYQPERVS 658 Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 + + + + R+++ G+K+ V+ HL Sbjct: 659 LSDKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLN 718 Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 S ++L S A L + + + V+ GDFN Sbjct: 719 SKRGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI- 777 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + I+ D + + S + + N +D ++ ++ + Sbjct: 778 ----QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRHLLDHYEFDMVHV---- 829 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 830 NSPFMEAHGRASDHDPLLLQLSF 852 >gi|21910025|ref|NP_664293.1| hypothetical protein SpyM3_0489 [Streptococcus pyogenes MGAS315] gi|28896277|ref|NP_802627.1| hypothetical protein SPs1365 [Streptococcus pyogenes SSI-1] gi|21904215|gb|AAM79096.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315] gi|28811528|dbj|BAC64460.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1] Length = 910 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 90/323 (27%), Gaps = 59/323 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80 K+ + S+NI S + + + + +L+ DI+ L E+ N Sbjct: 548 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 599 Query: 81 A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 K T+ + N +I T + + V Sbjct: 600 TDDGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVS 658 Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 + + + + R+++ G+K+ V+ HL Sbjct: 659 LSDKPKGGARDALTWVNGELNLSVGRIDPTNVAWKDVRKSLAAEFIFQGRKVVVVANHLN 718 Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 S ++L S A L + + + V+ GDFN Sbjct: 719 SKRGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI- 777 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + I+ D + + S + + N +D ++ ++ + Sbjct: 778 ----QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRHLLDHYEFDMVHV---- 829 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 830 NSPFMEAHGRASDHDPLLLQLSF 852 >gi|329913211|ref|ZP_08275907.1| hypothetical protein IMCC9480_1123 [Oxalobacteraceae bacterium IMCC9480] gi|327545407|gb|EGF30623.1| hypothetical protein IMCC9480_1123 [Oxalobacteraceae bacterium IMCC9480] Length = 611 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 94/307 (30%), Gaps = 32/307 (10%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNA 79 +R+ S N+ G ++++ + L LDAD++ L E+ + A Sbjct: 308 GGTLRVASMNVLNYFTTLGARGAGSALELSRQR-DKLVAAIAGLDADVLGLMEIENNPAA 366 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 +A + + +T I+ S+ I A+ + V L L + Sbjct: 367 LADLVGALNARLGDNTYAAIDSGVPGSDV-IKVALIYKPARVLTL-GPRELPPTRGFLVD 424 Query: 140 AGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSC------SLLSQQAQWL 191 G R + N W++ HLKS S + + S+QA L Sbjct: 425 GGVRPPLAQHFAARDNNGSFWMVLSHLKSKSSCPSDTRSIERDRGQGCWNAARSRQAGAL 484 Query: 192 KDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 W+ ++ GDFN ++ +TI+ + + + Sbjct: 485 LQWVDTLVARSGDGDVLMLGDFNAYLDEDPI-----RTIEAAGHADLLRRLPPAERYSYV 539 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------KRLSDHC 296 +D+ + + + +E + R SDH Sbjct: 540 FAGMAGALDHGFASRTLAPHVSGVTIWHANADEPAVLDYNTESKPDDRYAATPWRASDHD 599 Query: 297 PISIDYD 303 P+ + Sbjct: 600 PVLVGLT 606 >gi|306827643|ref|ZP_07460923.1| endonuclease/exonuclease/phosphatase [Streptococcus pyogenes ATCC 10782] gi|304430206|gb|EFM33235.1| endonuclease/exonuclease/phosphatase [Streptococcus pyogenes ATCC 10782] Length = 910 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 90/323 (27%), Gaps = 59/323 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80 K+ + S+NI S + + + + +L+ DI+ L E+ N Sbjct: 548 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 599 Query: 81 A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 K T+ + N +I T + + V Sbjct: 600 TDDGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVS 658 Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 + + + + R+++ G+K+ V+ HL Sbjct: 659 LSDKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLN 718 Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 S ++L S A L + + + V+ GDFN Sbjct: 719 SKRGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI- 777 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + I+ D + + S + + N +D ++ ++ + Sbjct: 778 ----QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRHLLDHYEFDMVHV---- 829 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 830 NSPFMEAHGRASDHDPLLLQLSF 852 >gi|139474060|ref|YP_001128776.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes str. Manfredo] gi|134272307|emb|CAM30561.1| endonuclease/exonuclease/phosphatase family surface anchored protein [Streptococcus pyogenes str. Manfredo] Length = 910 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 90/323 (27%), Gaps = 59/323 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80 K+ + S+NI S + + + + +L+ DI+ L E+ N Sbjct: 548 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 599 Query: 81 A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 K T+ + N +I T + + V Sbjct: 600 TDDGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVS 658 Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 + + + + R+++ G+K+ V+ HL Sbjct: 659 LSDKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLN 718 Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 S ++L S A L + + + V+ GDFN Sbjct: 719 SKRGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI- 777 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + I+ D + + S + + N +D ++ ++ + Sbjct: 778 ----QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRHLLDHYEFDMVHV---- 829 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 830 NSPFMEAHGRASDHDPLLLQLSF 852 >gi|94990135|ref|YP_598235.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS10270] gi|94543643|gb|ABF33691.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS10270] Length = 910 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 90/323 (27%), Gaps = 59/323 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80 K+ + S+NI S + + + + +L+ DI+ L E+ N Sbjct: 548 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 599 Query: 81 A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 K T+ + N +I T + + V Sbjct: 600 TDDGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVS 658 Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 + + + + R+++ G+K+ V+ HL Sbjct: 659 LSDKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLN 718 Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 S ++L S A L + + + V+ GDFN Sbjct: 719 SKRGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI- 777 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + I+ D + + S + + N +D ++ ++ + Sbjct: 778 ----QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRHLLDHYEFDMVHV---- 829 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 830 NSPFMEAHGRASDHDPLLLQLSF 852 >gi|94988256|ref|YP_596357.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS9429] gi|94992130|ref|YP_600229.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS2096] gi|94541764|gb|ABF31813.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS9429] gi|94545638|gb|ABF35685.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS2096] Length = 910 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 90/323 (27%), Gaps = 59/323 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80 K+ + S+NI S + + + + +L+ DI+ L E+ N Sbjct: 548 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 599 Query: 81 A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 K T+ + N +I T + + V Sbjct: 600 TDDGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVS 658 Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 + + + + R+++ G+K+ V+ HL Sbjct: 659 LSDKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLN 718 Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 S ++L S A L + + + V+ GDFN Sbjct: 719 SKRGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI- 777 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + I+ D + + S + + N +D ++ ++ + Sbjct: 778 ----QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRHLLDHYEFDMVHV---- 829 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 830 NSPFMEAHGRASDHDPLLLQLSF 852 >gi|50913934|ref|YP_059906.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS10394] gi|50903008|gb|AAT86723.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS10394] Length = 910 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 90/323 (27%), Gaps = 59/323 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80 K+ + S+NI S + + + + +L+ DI+ L E+ N Sbjct: 548 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 599 Query: 81 A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 K T+ + N +I T + + V Sbjct: 600 TDDGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVS 658 Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 + + + + R+++ G+K+ V+ HL Sbjct: 659 LSDKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLN 718 Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 S ++L S A L + + + V+ GDFN Sbjct: 719 SKRGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI- 777 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + I+ D + + S + + N +D ++ ++ + Sbjct: 778 ----QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRHLLDHYEFDMVHV---- 829 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 830 NSPFMEAHGRASDHDPLLLQLSF 852 >gi|78046289|ref|YP_362464.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034719|emb|CAJ22364.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 287 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 45/298 (15%), Positives = 85/298 (28%), Gaps = 30/298 (10%) Query: 8 ALVFFLVPCTA-SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 AL+ +P A + A +R++S+N+ V + KR + K Sbjct: 17 ALLCIALPALAVTPAAPLRVMSFNVR-------VPADTDGDKRWQVRRAAMVALIKQTHP 69 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D+ QE+ S A + F R + + + ++ Sbjct: 70 DVFGTQELVSEQAAFLAEQLPDYRWFGQGRRGDDSDEHM-GVFYDARVLQVVESGNFWLS 128 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 P ++ R A L E K + + + +LS+ Sbjct: 129 DTPERAGSITWGNVLPRMATWALFERRSDKSRFYLFNTHFPYRDEDEPARERSARLILSR 188 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 AQ + VP V+ GDFN + + + + Sbjct: 189 IAQ---------LPATVPVVLTGDFNSDPD--KITYPTLTAVLRDARAQASKRSGPENTF 237 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + ID+ + + D + G SDH P+ ++D+ Sbjct: 238 QDFTTHPTRRIDWILYRG----------LRPTRFATLDDRPGGILPSDHYPVMAEFDW 285 >gi|19745837|ref|NP_606973.1| hypothetical protein spyM18_0808 [Streptococcus pyogenes MGAS8232] gi|19747984|gb|AAL97472.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232] Length = 910 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 43/323 (13%), Positives = 89/323 (27%), Gaps = 59/323 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80 K+ + S+NI S + + + + +L+ DI+ L E+ N Sbjct: 548 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 599 Query: 81 A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 K + + N +I T + + V Sbjct: 600 TDDGTTDATQSAQRLIDAIKKLGGPAYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVS 658 Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 + + + + R+++ G+K+ V+ HL Sbjct: 659 LSDKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLN 718 Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 S ++L S A L + + + V+ GDFN Sbjct: 719 SKRGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI- 777 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + I+ D + + S + + N +D ++ ++ + Sbjct: 778 ----QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRHLLDHYEFDMVHV---- 829 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 830 NSPFMEAHGRASDHDPLLLQLSF 852 >gi|325925887|ref|ZP_08187256.1| putative extracellular nuclease [Xanthomonas perforans 91-118] gi|325543718|gb|EGD15132.1| putative extracellular nuclease [Xanthomonas perforans 91-118] Length = 572 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 91/324 (28%), Gaps = 35/324 (10%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60 L L V +R+ S+N+ G + ++ + L Sbjct: 256 LTLPAMPTAVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 315 Query: 61 AKNLDADIVFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 LDAD+ L E+ + AV+++ + ++ ++ I I Sbjct: 316 IVPLDADVAALMEVENDGNGADAAVSQLVAALNAAGKDKDWQFVDTGSGPGDDAIRVGIL 375 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKS-FCFLDSL 173 R V + + L G +R + G V+ H KS C S Sbjct: 376 YRSSQVTPVGKPATLTGGPFENH---SRVPLAQAFRSARGATFVVVANHFKSKGCGNASG 432 Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWK 226 + A+ L W+ V+ GDFN + Sbjct: 433 ADADQQDGQACWNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYAMEMPMRS---- 488 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + + F + + +D+ ++ K L + I + D Sbjct: 489 -LRASGWQDAFAVAGVKQPYSYVYDGLSGRLDHALLSPAMAKQLRGAAEWHINADVMDDA 547 Query: 287 SRG-------KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 548 GYAKRNLPGPWRSSDHDPVLLAFS 571 >gi|126650018|ref|ZP_01722251.1| endonuclease/exonuclease/phosphatase family protein [Bacillus sp. B14905] gi|126593190|gb|EAZ87152.1| endonuclease/exonuclease/phosphatase family protein [Bacillus sp. B14905] Length = 1275 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 45/328 (13%), Positives = 90/328 (27%), Gaps = 60/328 (18%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMG 75 VA K+ + S+NI S + + DI+ L E+ Sbjct: 844 EPVADKLNVASYNIENFSNNPANTSN--------EKVDRIAATFVKNMKSPDIITLVEVQ 895 Query: 76 SYNA------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + K + + N +I Sbjct: 896 DNDGQIDSGNADASESYMRLINAIKAAGGPAYDW-IDVMPINNTVGGAPGGNIRVGYLYN 954 Query: 118 KKNVRVLQQSY----------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 V ++ + G D A R+ + + + + ++ Sbjct: 955 PTRVSLVTGTKGAGDQANGWTADGSLALNPGFVDPTKFADTRKPIAAEFKFQEEHVVIIG 1014 Query: 162 IHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215 HL S SL S + Q AQ + D+I + + ++AGD N Sbjct: 1015 AHLNSKGGDGSLWGPTQPPVLESVTKRLQLAQAINDFIDEGLAINPDINIIVAGDMNDF- 1073 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 +T+ + K ++ N +D+ ++ N + Sbjct: 1074 ----EFTPALETLKGDVLTNMVDKAPETDRFTYFFQGNNQVLDHILVSNNLA----NVTA 1125 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++++ + R SDH P+ + D Sbjct: 1126 IDLIHINANFTEAQGRASDHDPVLVQID 1153 >gi|86360979|ref|YP_472866.1| putative metal-dependent hydrolase protein [Rhizobium etli CFN 42] gi|86285081|gb|ABC94139.1| putative metal-dependent hydrolase protein [Rhizobium etli CFN 42] Length = 242 Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 35/285 (12%), Positives = 84/285 (29%), Gaps = 49/285 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + ++L+++N+++ + D + +ADIV LQE+ Sbjct: 4 KSIKLLTYNVHSCIGNDR-----------KLDPGRIASVIAEAEADIVALQEVDVLRRRT 52 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + H + + A+ ++ PL Sbjct: 53 GGVDQAHVIASLLKMQAHFHPALSIAEEQY-GDAIITALPTGAVKAGPLPSIG------E 105 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD--WITQKK 199 R A+ + + + +K+ V++ HL +Q L + W+ Sbjct: 106 ARGALSIEILVGDRKLLVVNTHLGLRG-------------RERIRQMTTLLNSGWLRGPS 152 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 + VP ++ GDFN + +++ + + + +D+ Sbjct: 153 DEPVPGILCGDFNAIPSSAT-YRLAARSLTDAQLA-----GSAAPRATFPSRYPLMRLDH 206 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + + SDH P+ + F Sbjct: 207 IFVTEGL----------VVQRATVLQTRLTRVASDHLPLLAEISF 241 >gi|157164312|ref|YP_001467079.1| putative endonuclease/exonuclease/phosphatase [Campylobacter concisus 13826] gi|112800432|gb|EAT97776.1| putative endonuclease/exonuclease/phosphatase [Campylobacter concisus 13826] Length = 460 Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 39/314 (12%), Positives = 88/314 (28%), Gaps = 50/314 (15%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSE--QEGVSLWKNSVKRTTSD-------YTL 56 + AL + + A ++ + ++N+ L + +G + D Sbjct: 1 MRALFVLVFAVLVAFASEISIATYNVQNLFDCKDDGSEYPDFKSSTSKWDCEAASSKLKR 60 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 RQ LD DI+ L+E+ + + + + + T+ + + I Sbjct: 61 TRQVIDALDTDIIALEEVENEQVLKSLVEGSDYKFIIFTKEKNSPVGLGIVSKIQ----- 115 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 P R ++++ E+ GKK V H ++ +++ Sbjct: 116 ------------PSSSEIFEVPNVKTRNILKVVFEVEGKKFSVFVNHFPAYKNGINMQKK 163 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + + ++ GDFN I Sbjct: 164 AER--------------TLRAALGNEQNVIVLGDFNSPYGQKSI---LNDIIVTRGFYDL 206 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK----FLIQESFSEI---LYNEDDIKSRG 289 + ++ K ID+ ++ + I SF ++ ++ Sbjct: 207 YSFLAPKDRYSHAVHGKKRAIDHVLLSPSFMANGDLSYIDGSFEVFKPSFVVDEHGFAKS 266 Query: 290 KRLSDHCPISIDYD 303 SDH + Sbjct: 267 DLYSDHFALKFKIS 280 >gi|229131979|ref|ZP_04260843.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196] gi|228651483|gb|EEL07454.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196] Length = 788 Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 85/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ +QEM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVQEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 AINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVISNHLNSKLGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ Q+K + P V+ GD N + Sbjct: 661 QPLVLKSEEKRVQLAQEVNHFVQGIQEKNTNAPVVVLGDMNDFEFSKPLEALEGTILKD- 719 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 720 ----MLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ + D Sbjct: 772 VSDHDPVLVQID 783 >gi|229166011|ref|ZP_04293775.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621] gi|228617422|gb|EEK74483.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621] Length = 788 Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 85/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ +QEM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVQEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 AINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVISNHLNSKLGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ Q+K + P V+ GD N + Sbjct: 661 QPLVLKSEEKRVQLAQEVNHFVQGIQEKNTNAPVVVLGDMNDFEFSKPLEALEGTILKD- 719 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 720 ----MLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ + D Sbjct: 772 VSDHDPVLVQID 783 >gi|163938988|ref|YP_001643872.1| endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis KBAB4] gi|163861185|gb|ABY42244.1| Endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis KBAB4] Length = 788 Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 85/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ +QEM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVQEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 AINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVISNHLNSKLGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ Q+K + P V+ GD N + Sbjct: 661 QPLVLKSEEKRVQLAQEVNHFVQGIQEKNTNAPVVVLGDMNDFEFSKPLEALEGTILKD- 719 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 720 ----MLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ + D Sbjct: 772 VSDHDPVLVQID 783 >gi|71903215|ref|YP_280018.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS6180] gi|71802310|gb|AAX71663.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS6180] Length = 910 Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 90/323 (27%), Gaps = 59/323 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80 K+ + S+NI S + + + + +L+ DI+ L E+ N Sbjct: 548 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 599 Query: 81 A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 K T+ + N +I T + + V Sbjct: 600 TDDGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVS 658 Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 + + + + R+++ G+K+ V+ HL Sbjct: 659 LSDKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLN 718 Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 S ++L S A L + + + V+ GDFN Sbjct: 719 SKRGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI- 777 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + I+ D + + S + + N +D ++ ++ + Sbjct: 778 ----QLIEEGDMVNLVNRHDISDRYSYFHQGNNQTLDNILVSRHLLDHYEFDMVHV---- 829 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 830 NSPFMEAHGRASDHDPLLLQLSF 852 >gi|209559126|ref|YP_002285598.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus pyogenes NZ131] gi|209540327|gb|ACI60903.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus pyogenes NZ131] Length = 910 Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 90/323 (27%), Gaps = 59/323 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80 K+ + S+NI S + + + + +L+ DI+ L E+ N Sbjct: 548 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 599 Query: 81 A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 K T+ + N +I T + + V Sbjct: 600 TDDGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVS 658 Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 + + + + R+++ G+K+ V+ HL Sbjct: 659 LSDKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLN 718 Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 S ++L S A L + + + V+ GDFN Sbjct: 719 SKRGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGTKHQANIVMLGDFNDFEFTKTI- 777 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + I+ D + + S + + N +D ++ ++ + Sbjct: 778 ----QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRHLLDHYEFDMVHV---- 829 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 830 NSPFMEAHGRASDHDPLLLQLSF 852 >gi|83649180|ref|YP_437615.1| extracellular nuclease [Hahella chejuensis KCTC 2396] gi|83637223|gb|ABC33190.1| predicted extracellular nuclease [Hahella chejuensis KCTC 2396] Length = 835 Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 41/325 (12%), Positives = 86/325 (26%), Gaps = 43/325 (13%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDADI 68 + A +++ S+N+ +G + + +DAD+ Sbjct: 457 APVTTGAGNLKVASFNVLNYFNGDGQGGGFPTSRGATTAEELERQAAKTVAALLAMDADV 516 Query: 69 VFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 V L E+ + +A+ + + S ++I + + V Sbjct: 517 VGLMEIENDGYGADSAIQDLVNRLNAAGANYAVVNPGLS-ALGGDEIAVGMIYKADKVTP 575 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC-- 181 + L A + N KI V+ H KS ++ + Sbjct: 576 AGAAKSLSSYPFDNFNRQP-LAQTFSLNDNDGKITVVVNHFKSKGCTNAEGDNQDQGDGQ 634 Query: 182 ----SLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 + S+ A L DW+ +I GD N + Sbjct: 635 GCYNAKRSEAAVALADWLASDPTGAEDADVLIIGDLNAYAKEDPI-----MALQTQGYHN 689 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289 + + +D+ + ++ ++ S I +E Sbjct: 690 LLAELNGDAAYSYVFSGETGYLDHALASESLRSQVVGVSEWHINGDEPRALDYNVEFKTD 749 Query: 290 -----------KRLSDHCPISIDYD 303 R SDH P+ ++ Sbjct: 750 AQVLSLYSPDAFRSSDHDPVIVEIS 774 >gi|56807877|ref|ZP_00365710.1| COG2374: Predicted extracellular nuclease [Streptococcus pyogenes M49 591] Length = 846 Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 90/323 (27%), Gaps = 59/323 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80 K+ + S+NI S + + + + +L+ DI+ L E+ N Sbjct: 484 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 535 Query: 81 A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 K T+ + N +I T + + V Sbjct: 536 TDDGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVS 594 Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 + + + + R+++ G+K+ V+ HL Sbjct: 595 LSDKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLN 654 Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 S ++L S A L + + + V+ GDFN Sbjct: 655 SKRGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGTKHQANIVMLGDFNDFEFTKTI- 713 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + I+ D + + S + + N +D ++ ++ + Sbjct: 714 ----QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRHLLDHYEFDMVHV---- 765 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 766 NSPFMEAHGRASDHDPLLLQLSF 788 >gi|294667784|ref|ZP_06732994.1| extracellular nuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602410|gb|EFF45851.1| extracellular nuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 572 Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 90/324 (27%), Gaps = 35/324 (10%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60 L L V +R+ S+N+ G + ++ + L Sbjct: 256 LTLPAMPTAVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 315 Query: 61 AKNLDADIVFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L AD+ L E+ + AV+++ + ++ ++ I I Sbjct: 316 IVPLGADVAALMEVENDGNAADAAVSQLVAALNAAGKDKDWQFVDTGSGPGDDAIRVGIL 375 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKS-FCFLDSL 173 R V + + L G +R + G V+ H KS C S Sbjct: 376 YRSSQVTPVGKPAMLTGGPFENH---SRVPLAQAFRSARGATFVVVANHFKSKGCGNASG 432 Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWK 226 + A+ L W+ V+ GDFN + Sbjct: 433 ADADQQDGQACWNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYAMEMPMRS---- 488 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + + F + + +D+ ++ K L + I + D Sbjct: 489 -LRASGWQDAFAVAGVKQPYSYVYDGLSGRLDHALLSPAMAKQLRGAAEWHINADVMDAA 547 Query: 287 SRG-------KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 548 GYAKRNLPGPWRSSDHDPVLLGFS 571 >gi|319899949|ref|YP_004159677.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] gi|319414980|gb|ADV42091.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] Length = 287 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 44/316 (13%), Positives = 87/316 (27%), Gaps = 42/316 (13%) Query: 1 MIRKYVLALVFFLVPC-----TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55 M R +L L + C S V ++S+NI + ++ ++ W+ R Sbjct: 1 MKRIILLLLPLWAASCGQSKKPVSAPDPVNVMSFNIRYDNPEDSLNNWRYRKDR------ 54 Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + + D D++ QE+ + + S Sbjct: 55 -VATAIRFYDTDLLGTQEVLHNQLKDLQECLPEYGVVGVGREDGKEKGEYSALWYKKDRF 113 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSL 173 V + P + + A R A + +++GK+ + L+ HL Sbjct: 114 VLLDSGNFWLSETPGVAGSKGWDGACERIASWAKLKDKVSGKEYFALNTHL-----DHVG 168 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTID 229 S L+ + L + +P ++ GDFN + + Sbjct: 169 VVARSEGIRLILDRVDEL--------SNGLPVIVTGDFNADPESDVIKHVTDPANPRHLT 220 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + + IDY + + Y Sbjct: 221 DARMESPVVYGPAWTFHDFGKIPYDQRPLIDYVFVRNGL---------KVLRYGVLAETE 271 Query: 288 RGKRLSDHCPISIDYD 303 LSDH P+ + + Sbjct: 272 GNAFLSDHSPVLVTVE 287 >gi|253571354|ref|ZP_04848761.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251839307|gb|EES67391.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 315 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 38/324 (11%), Positives = 83/324 (25%), Gaps = 35/324 (10%) Query: 1 MIRKYVLALVF---FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 M + +L +V C + + + S+N+ + + Y ++ Sbjct: 1 MKLRNLLFIVLAAIVFCNCQSYQPTSLTVASYNLRNANGSDSARGDG-----WGQRYPVI 55 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 Q + D DI QE + + S T Sbjct: 56 AQIVQYHDFDIFGTQECFLHQLKDMKEALPGYDYIGVGRDDGKDKGEHSAIFYRTDKFDI 115 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + P + +K + R + L +L + Sbjct: 116 VEKGDFWLSETPDVPSK-GWDAVLPRICSWGHFKCKDTSFEFLFFNLHM---DHIGKKAR 171 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-TIDPNDSLIR 236 S L+ ++ + L +P ++ GDFN + + K + + Sbjct: 172 VESAFLVQEKMKELGR------GKNLPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKCD 225 Query: 237 FPKEKDSRCNANKNLRNK-IPIDYFVMDQNAYKFL---------------IQESFSEILY 280 + + N ID+ + + + +E + Sbjct: 226 YRYALNGTFNNFDPNSFTESRIDHIFVSPSFHVKRYGVLTDTYRSVRENSKKEEVRDCPE 285 Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304 + SDH P+ ++ F Sbjct: 286 EITIKAYEARTPSDHFPVKVELVF 309 >gi|218509998|ref|ZP_03507876.1| putative metal-dependent hydrolase protein [Rhizobium etli Brasil 5] Length = 242 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 83/285 (29%), Gaps = 49/285 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + ++L+++N+++ + D + ADIV LQE+ Sbjct: 4 KSIKLLTYNVHSCIGNDR-----------KLDPGRIASVIAEAGADIVALQEVDVLRRRT 52 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + H + + A+ ++ PL Sbjct: 53 GGIDQAHLIASLLKMQAHFHPALSIAEEQY-GDAIITALPTSAVKAGPLPSIG------E 105 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD--WITQKK 199 R A+ + V + +K+ V++ HL +Q L + W+ Sbjct: 106 QRGALSVEVLVGDRKLLVVNTHLGLRG-------------RERIRQMTTLLNSGWLRGAM 152 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 E +P V+ GDFN + +++ K + + + +D+ Sbjct: 153 EEPLPCVLCGDFNALPSSAT-YRLVARSLKDAQL-----GGKAAPRATFPSRYPLMRLDH 206 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + K SDH P+ + F Sbjct: 207 IFVTDDLVVKRAAV----------LQNRLTKVASDHLPLFAEISF 241 >gi|16124778|ref|NP_419342.1| hypothetical protein CC_0523 [Caulobacter crescentus CB15] gi|221233494|ref|YP_002515930.1| endonuclease/exonuclease/phosphatase family protein [Caulobacter crescentus NA1000] gi|13421706|gb|AAK22510.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220962666|gb|ACL94022.1| endonuclease/exonuclease/phosphatase family protein [Caulobacter crescentus NA1000] Length = 259 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 88/284 (30%), Gaps = 42/284 (14%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + RL+++N++ + D + + D+V LQE+ A Sbjct: 2 KTFRLMTYNVHRCVGTDR-----------KLDVERVAEVIAAERPDVVALQELDVGRART 50 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + H +++ A+ ++ L Sbjct: 51 QSVDQAHRLAELLKMSFHFHPAMAVEEELY-GDAILTALPERRIKA-QGLPLYRRVPGLE 108 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKK 199 R A+ + VE+ G K+ +++ HL +QA L +WI + + Sbjct: 109 PRGALWIEVEVGGAKVQIINTHLGLVP-------------QEQKRQAAALLGPEWIGE-E 154 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 P V+ GDFN D + + + ++ + ID+ Sbjct: 155 AWRAPGVLLGDFNATPYSATYRMLRTALRDAQAPSPAWLRPATATFPSSFPF---MRIDH 211 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + + +R + SDH P+ ID + Sbjct: 212 VFVTKGLETRAVSSPYD----------ARARIASDHLPLVIDLE 245 >gi|171910435|ref|ZP_02925905.1| hypothetical protein VspiD_04665 [Verrucomicrobium spinosum DSM 4136] Length = 280 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 81/297 (27%), Gaps = 34/297 (11%) Query: 9 LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 ++ P ++ VRLV+WN+ + + + + AD+ Sbjct: 1 MILISAPLNGHASEVVRLVTWNLEWFP----GRKPTATQGKKDRHFLEVAAVIPQFRADV 56 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + LQE+ ++ K+ + R + IA+ + Sbjct: 57 MVLQEVRDQDSAEKLAKLMPGFQVHVVSRFKDEVGGAVGLQQ---IAIMSRFP----ADG 109 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + R V + + G+ + V +HLKS + Sbjct: 110 AWAESWKRGWANAPRGYVYAKLIVEGRPLHVYGLHLKSNLGDPIKNTSKREDA------V 163 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGN-NDDFWKTIDPNDSLIRFPKEKDSR--C 245 + L I + ++ P V+ GDFN L D ++ F Sbjct: 164 EQLLGHIKDQCKAGEPVVVTGDFNTSKEQLNLAGDRTLLKLEEQGFFWAFEGVPLKDRIT 223 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D+ + + SDH P+++D Sbjct: 224 IPGGGRYPDACFDHVYTRD--LGRPVAAVLKDTP------------GSDHFPVAVDL 266 >gi|294627485|ref|ZP_06706068.1| extracellular nuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598116|gb|EFF42270.1| extracellular nuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 572 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 91/324 (28%), Gaps = 35/324 (10%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60 L L V +R+ S+N+ G + ++ + T L Sbjct: 256 LTLPAMPTAVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLTKLVAT 315 Query: 61 AKNLDADIVFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L AD+ L E+ + AV+++ + ++ ++ I I Sbjct: 316 IVPLGADVAALMEVENDGNAADAAVSQLVAALNAAGKDKDWQFVDTGSGPGDDAIRVGIL 375 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKS-FCFLDSL 173 R V + + L G +R + G V+ H KS C S Sbjct: 376 YRSSQVTPVGKPAMLTGGPFENH---SRVPLAQAFRSARGATFVVVANHFKSKGCGNASG 432 Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWK 226 + A+ L W+ V+ GDFN + Sbjct: 433 ADADQQDGQACWNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYAMEMPMRS---- 488 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + + F + + +D+ ++ K L + I + D Sbjct: 489 -LRASGWQDAFAVAGVKQPYSYVYDGLSGRLDHALLSPAMAKQLRGAAEWHINADVMDAA 547 Query: 287 SRG-------KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 548 GYAKRNLPGPWRSSDHDPVLLGFS 571 >gi|163757064|ref|ZP_02164169.1| hypothetical protein KAOT1_04125 [Kordia algicida OT-1] gi|161322964|gb|EDP94308.1| hypothetical protein KAOT1_04125 [Kordia algicida OT-1] Length = 277 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 89/306 (29%), Gaps = 40/306 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 + KY+L L+ + + + +Q+++++S+NI + K + + Sbjct: 1 MMKYLLTLLVVFISFSVT-SQELKIMSYNI-------KLDYPKEGKNSWMNRKPFMVNQI 52 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 K + ++ +QE + + S AI +K + Sbjct: 53 KFYEPTVLGVQEALPNQMKDLDSLLTDYSFVGVGRDDGKNKGEYS------AIFYKKDEL 106 Query: 122 RVLQQSYPLLGAKDS-----FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 V+Q S L + NR L + K + Sbjct: 107 EVVQSSTFWLSETPEKVSMGWDAVCNRMCTYALFQHTKTKQKFWVFNTHFDHVGKE---- 162 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 A + + I P + GDFN + N+ D +++ + + Sbjct: 163 ------ARKNSAVLILNKIKSANTENYPVFLTGDFNMEPNHESI-DHITQSLKDSKKIAA 215 Query: 237 FPKEKDSRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + N + IDY + ++ Y + SDH Sbjct: 216 LDFGPEGTFNGFHFDKPVTRRIDYIFVSKH---------VKVHKYAVLSDHWNMQYPSDH 266 Query: 296 CPISID 301 P+ I+ Sbjct: 267 LPVLIE 272 >gi|255532876|ref|YP_003093248.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] gi|255345860|gb|ACU05186.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] Length = 282 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 100/312 (32%), Gaps = 51/312 (16%) Query: 2 IRKYVLALVFFLVPCT---------ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS 52 I+ + +A + C+ + + +R++S+NI+ S Sbjct: 13 IKAFAVAALLIGTSCSKSKENKTEPETSKETLRVMSYNIH--------IGNPPSEAAGVV 64 Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 K + D+V LQE+ + + + + T +K ++ Sbjct: 65 KLEATANAIKQGNPDLVALQEVDKFTTRSGIDLDQAKKLAELTGMNYYFAKALDRSNGEY 124 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 +A+ K Y L + + +++ + NGK+I+ + H Sbjct: 125 GVAILSKFPIKTSSRYSLPVNAGTGAELRVVGIIQVEL-PNGKRIYFVSTHFDHL----- 178 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 + S A+ L I K+S P ++ GDFN W I Sbjct: 179 -------AESNRELHARELLKAIQPYKDS--PVIVGGDFNMPPTSD-----TWNIIKTEM 224 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 ++ N IDY ++++ A + +S+ I + Sbjct: 225 TMGCTT---CPSTFPATNPNT--TIDYLLLNKQASGYFSIKSYQTI---------AERYA 270 Query: 293 SDHCPISIDYDF 304 SDH PI + + Sbjct: 271 SDHVPIIAELQY 282 >gi|228899360|ref|ZP_04063622.1| Sphingomyelinase C [Bacillus thuringiensis IBL 4222] gi|228860266|gb|EEN04664.1| Sphingomyelinase C [Bacillus thuringiensis IBL 4222] Length = 333 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 101/314 (32%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKKLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + I V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFIHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + +I GD N +KT++ + Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYTSMFKTLNASVPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 NDYSDHYPVEATIS 331 >gi|240141150|ref|YP_002965630.1| putative endonuclease/exonuclease/phosphatase [Methylobacterium extorquens AM1] gi|240011127|gb|ACS42353.1| putative endonuclease/exonuclease/phosphatase [Methylobacterium extorquens AM1] Length = 275 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 43/289 (14%), Positives = 83/289 (28%), Gaps = 41/289 (14%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 ++ ++++RL+++N+ +G + + L DIV LQE+ Sbjct: 21 PASAASRRLRLLTYNVRHCRGTDGRVAP-----------ERVARVIAALAPDIVALQEVD 69 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + H + AV L+++ PL G Sbjct: 70 VGRPRTDGLDQAEEIARLVGMFSHFHPALHI-EEERYGDAVLTHLPSRLKRAGPLPGLLR 128 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--D 193 R A+ + V K+ VL H + QA+ L D Sbjct: 129 RPG-LEPRGALWVEVTAGASKLQVLTTHFGLLG-------------AERVAQAKALLGPD 174 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 W+ P V+ GDFN + + L + + + Sbjct: 175 WL-GDPACHAPTVLLGDFNAMGWSRAYRRLSGR-LTDARRLTGERRWRRGGA-TFPSRFP 231 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D+ + + I ++ SDH P+ + Sbjct: 232 LLRVDHVFVSERVAVERIAV----------VDTPLARKASDHLPVLAEI 270 >gi|228919526|ref|ZP_04082890.1| Sphingomyelinase C [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840169|gb|EEM85446.1| Sphingomyelinase C [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 333 Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 100/314 (31%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + I V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFIHVIGTHLQA---EDSMCGKTSPA-SVRTD 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + +I GD N +KT++ + Sbjct: 198 QLKEIQDFIKNKNIPKNEYVLIGGDMNVNKINTENKNDSEYASMFKTLNASVPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 NDYSDHYPVEATLS 331 >gi|254563662|ref|YP_003070757.1| endonuclease/exonuclease/phosphatase [Methylobacterium extorquens DM4] gi|254270940|emb|CAX26945.1| putative endonuclease/exonuclease/phosphatase [Methylobacterium extorquens DM4] Length = 275 Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 43/289 (14%), Positives = 84/289 (29%), Gaps = 41/289 (14%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 ++ ++++RL+++N+ +G + + L DIV LQE+ Sbjct: 21 PASAASRRLRLLTYNVRHCRGTDGRVAP-----------ERVARVIAALAPDIVALQEVD 69 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + H + AV L+++ PL G Sbjct: 70 VGRPRTDGLDQAEEIARLVGMFSHFHPALHI-EEERYGDAVLTHLPSRLKRAGPLPGLLR 128 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--D 193 R A+ + V K+ VL H + QA+ L D Sbjct: 129 RPG-LEPRGALWVEVAAGASKLQVLTTHFGLLG-------------AERVAQAKALLGPD 174 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 W+ P V+ GDFN + + + L + + + Sbjct: 175 WL-GDPACHAPTVLLGDFNATGWSRAYHRLSGR-LTDARRLTGERRWRRGGA-TFPSRFP 231 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D+ + + I ++ SDH P+ + Sbjct: 232 LLRVDHVFVSERVAVERIAV----------VDTPLARKASDHLPVLAEI 270 >gi|190894773|ref|YP_001985066.1| putative metal-dependent hydrolase [Rhizobium etli CIAT 652] gi|190700434|gb|ACE94516.1| putative metal-dependent hydrolase protein [Rhizobium etli CIAT 652] Length = 242 Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 82/285 (28%), Gaps = 49/285 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + ++L+++N+++ + D + ADIV LQE+ Sbjct: 4 KSIKLLTYNVHSCIGNDR-----------KLDPGRIASVIAEAGADIVALQEVDVLRRRT 52 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + H + + A+ ++ PL Sbjct: 53 GGIDQAHLIASLLKMQAHFHPALSVAEEQY-GDAIITALPTSAVKAGPLPSIG------E 105 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD--WITQKK 199 R A+ + V + +K+ V++ HL +Q L + W+ Sbjct: 106 QRGALSVEVLVGDRKLLVVNTHLGLRG-------------RERIRQMTTLLNSGWLRGAM 152 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 E +P V+ GDFN + +++ K S + + +D+ Sbjct: 153 EEPLPCVLCGDFNALPSSAT-YRLVARSLKDAQL-----GGKASPRATFPSRYPLMRLDH 206 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + SDH P+ + F Sbjct: 207 IFVTDDLVVKRAAV----------LQNRLTNVASDHLPLFAEISF 241 >gi|169827405|ref|YP_001697563.1| endonuclease yhcR [Lysinibacillus sphaericus C3-41] gi|168991893|gb|ACA39433.1| Endonuclease yhcR precursor [Lysinibacillus sphaericus C3-41] Length = 1379 Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 90/328 (27%), Gaps = 60/328 (18%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMG 75 VA K+ + S+NI S + + N DI+ L E+ Sbjct: 948 QPVADKLNVASYNIENFSNNPANTSN--------EKVDRIAATFVNNMKSPDIITLVEVQ 999 Query: 76 SYNA------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + K + + N +I Sbjct: 1000 DNDGQIDSGNADASESYMRLIHAIKAAGGPAYDW-IDVMPINNTVGGAPGGNIRVGYLYN 1058 Query: 118 KKNVRVLQQSYPL----------------LGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 V ++ L G D R+ + E +++ ++ Sbjct: 1059 PTRVSLVSGIKGLGNQANTWTADGSLALNPGFVDPSKFVDTRKPIAAEFEFQDERVVIIG 1118 Query: 162 IHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215 HL S SL S Q AQ + D+I + + F++AGD N Sbjct: 1119 AHLNSKGGDGSLWGPTQPPVLESVKKRIQLAQAINDFIDEGLAINPNLNFIVAGDMNDF- 1177 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 +T+ + K + N +D+ ++ + + Sbjct: 1178 ----EFTPALETLKGDVLTNMIDKAPEQDRFTYFFQGNNQVLDHILVSNHLAD----VTE 1229 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++++ + R SDH P+ + D Sbjct: 1230 IDLIHMNANFTEAQGRASDHDPVLVQID 1257 >gi|21241048|ref|NP_640630.1| nuclease [Xanthomonas axonopodis pv. citri str. 306] gi|21106341|gb|AAM35166.1| nuclease [Xanthomonas axonopodis pv. citri str. 306] Length = 609 Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 89/324 (27%), Gaps = 35/324 (10%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60 L L V +R+ S+N+ G + ++ + L Sbjct: 293 LTLPAMPTAVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 352 Query: 61 AKNLDADIVFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L AD+ L E+ + AV+++ + ++ ++ I I Sbjct: 353 IVPLGADVAALMEVENDGNGADAAVSQLVAALNAAGKDKDWQFVDTGSGPGDDAIRVGII 412 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKS-FCFLDSL 173 R V + + L G +R + G V+ H KS C S Sbjct: 413 YRSSQVTPVGRPATLTGGPFENH---SRVPLAQAFRSARGATFVVVANHFKSKGCGNASG 469 Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWK 226 + A+ L W+ V+ GDFN Sbjct: 470 ADADQQDGQACWNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYAMETPMRS---- 525 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + + F + + +D+ ++ K L + + + D Sbjct: 526 -LRASGWQDAFAVAGVKQPYSYVYDGLSGRLDHALLSPAMAKQLRGAAEWHVNADVMDAA 584 Query: 287 SRG-------KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 585 GYAKRNLPGPWRSSDHDPVLLGFS 608 >gi|298386889|ref|ZP_06996444.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 1_1_14] gi|298260563|gb|EFI03432.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 1_1_14] Length = 315 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 38/324 (11%), Positives = 83/324 (25%), Gaps = 35/324 (10%) Query: 1 MIRKYVLALVF---FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 M + +L +V C + + + S+N+ + + Y ++ Sbjct: 1 MKLRNLLFIVLAAIVFCNCQSYQPTSLTVASYNLRNANGSDSARGDG-----WGQRYPVI 55 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 Q + D DI QE + + S T Sbjct: 56 AQIVQYHDFDIFGTQECFLHQLKDMKEALPGYDYIGVGRDDGKDKGEHSAIFYRTDKFDI 115 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + P + +K + R + L +L + Sbjct: 116 VEKGDFWLSETPDVPSK-GWDAVLPRICSWGHFKCKDTGFEFLFFNLHM---DHIGKKAR 171 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-TIDPNDSLIR 236 S L+ ++ + L +P ++ GDFN + + K + + Sbjct: 172 VESAFLVQEKMKELGR------GKNLPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKCD 225 Query: 237 FPKEKDSRCNANKNLRNK-IPIDYFVMDQNAYKFL---------------IQESFSEILY 280 + + N ID+ + + + +E + Sbjct: 226 YRYALNGTFNNFDPNSFTESRIDHIFVSPSFHVKRYGVLTDTYRSVRENSKKEDVRDCPE 285 Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304 + SDH P+ ++ F Sbjct: 286 EITIKAYEARTPSDHFPVKVELVF 309 >gi|229108284|ref|ZP_04237904.1| Sphingomyelinase C [Bacillus cereus Rock1-15] gi|228675169|gb|EEL30393.1| Sphingomyelinase C [Bacillus cereus Rock1-15] Length = 333 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 106/314 (33%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 VSTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDS-LIRFPK 239 Q + ++D+I + + +I GD N N +KT++ + + Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGYTA 257 Query: 240 EKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 D+ N+ +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 NDYSDHYPVEATIS 331 >gi|195977910|ref|YP_002123154.1| extracellular nuclease [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974615|gb|ACG62141.1| extracellular nuclease [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 926 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 47/323 (14%), Positives = 90/323 (27%), Gaps = 59/323 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80 K+ + S+NI S + + + + +L+ DI+ L E+ N Sbjct: 556 KLSIASYNIENFSANPSSTKD--------EKVRRIAESFIYDLNAPDIIGLIEVQDNNGP 607 Query: 81 A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 K T+ + N ++I T + + V Sbjct: 608 TDDGTTDATQSAQRLIDAIKALGGPTYQ-YVDIAPENNADGGQPGSNIRTGFLYQPERVS 666 Query: 123 VLQQSYPLLGAKDSF-----------------SRAGNRRAVELLVEINGKKIWVLDIHLK 165 + + + + + R+++ G K+ V+ HL Sbjct: 667 LSDKPRGGVNDAVKWVNGELSLSVGRIDPTNPAWKSVRKSLAAEFIFQGHKVVVVANHLN 726 Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 S +SL S A+ L + + V+ GDFN Sbjct: 727 SKRGDNSLYGRVQPVTFKSEERRHVLARLLSQFTKEGASQQANIVMLGDFNDYEFTKTI- 785 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 K I+ D + + S + N +D ++ +N + Sbjct: 786 ----KLIEEGDMANLVSRHELSDRYSYFYRGNNQTLDNMLVSRNLLGRYEFDMVHV---- 837 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 838 NSPFMEAHGRASDHDPLLLQLSF 860 >gi|218895728|ref|YP_002444139.1| sphingomyelin phosphodiesterase C [Bacillus cereus G9842] gi|218542554|gb|ACK94948.1| sphingomyelin phosphodiesterase C [Bacillus cereus G9842] Length = 333 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 101/314 (32%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + I V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFIHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + +I GD N +KT++ + Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYTSMFKTLNASVPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 NDYSDHYPVEATIS 331 >gi|30018853|ref|NP_830484.1| sphingomyelin phosphodiesterase [Bacillus cereus ATCC 14579] gi|229042535|ref|ZP_04190279.1| Sphingomyelinase C [Bacillus cereus AH676] gi|229126103|ref|ZP_04255125.1| Sphingomyelinase C [Bacillus cereus BDRD-Cer4] gi|229143400|ref|ZP_04271830.1| Sphingomyelinase C [Bacillus cereus BDRD-ST24] gi|29894395|gb|AAP07685.1| Sphingomyelin phosphodiesterase [Bacillus cereus ATCC 14579] gi|228640067|gb|EEK96467.1| Sphingomyelinase C [Bacillus cereus BDRD-ST24] gi|228657425|gb|EEL13241.1| Sphingomyelinase C [Bacillus cereus BDRD-Cer4] gi|228726807|gb|EEL78020.1| Sphingomyelinase C [Bacillus cereus AH676] Length = 333 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 102/314 (32%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 VSTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + +I GD N N +KT++ + Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 NDYSDHYPVEATIS 331 >gi|190892922|ref|YP_001979464.1| hypothetical protein RHECIAT_CH0003338 [Rhizobium etli CIAT 652] gi|190698201|gb|ACE92286.1| hypothetical protein RHECIAT_CH0003338 [Rhizobium etli CIAT 652] Length = 357 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 74/333 (22%), Positives = 128/333 (38%), Gaps = 57/333 (17%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +L SWNI L+ + GV L ++ R ++Y +R L+ D+V LQEMGS + V Sbjct: 26 KLASWNIGNLASKPGVPLRGHA--RDEAEYQHIRDIFAKLEPDVVALQEMGSIGSARAVV 83 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA---- 140 + +F + + +DI TAIA +K ++ + P L + A Sbjct: 84 GDSYNIVFEERCMNNSSHCNEDIDDIFTAIAYKKSLGQLTEVQVPQLSVMHTSECANETP 143 Query: 141 -GNRRAVELLVEINGKKIWVLDIHLKSFC--FLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R V + ++ + + I VL +HLK+ C + E + C+ L +QA L +WI Sbjct: 144 RPVRGGVGIQIQRDNETIVVLSVHLKASCKRNDNEAERDQADDCATLMKQADILSEWIKT 203 Query: 198 KKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-------- 248 ++ + ++AGDFNR+ ++ + + +D +E + Sbjct: 204 ERAAGKRVIVAGDFNRQLLDRGDHVAAKLRAVDAGVQFYPTSRECWASFPNRGAAIIAAA 263 Query: 249 ----------------KNLRNKIPIDYFVMDQNAYKFLIQES-------FSEILYNEDDI 285 + ++ IDYFV+ A + I D + Sbjct: 264 NQKFPEIAAAGGRPLPYSPKSNSKIDYFVVSGPAPQTPISSGQYAMGGEAKTTELATDYL 323 Query: 286 KS----------------RGKRLSDHCPISIDY 302 K+ SDHCPIS+ Sbjct: 324 KTCEGSPNKFEDGSVLTFSEVEPSDHCPISMSL 356 >gi|241113465|ref|YP_002973300.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861673|gb|ACS59339.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 242 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 34/285 (11%), Positives = 83/285 (29%), Gaps = 49/285 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 Q ++++++N+++ + D + +ADIV LQE+ Sbjct: 4 QSIKILTYNVHSCIGGDR-----------KLDPGRIASVIAEAEADIVALQEVDVLRRRT 52 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + H + + A+ ++ PL Sbjct: 53 GGVDQAHAIASLLKMQAHFHPALSIAEEQY-GDAIITSLPTGAVKAGPLPSIG------E 105 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD--WITQKK 199 R A+ + + + +K+ V++ HL +Q L + W+ Sbjct: 106 QRGAISVEILVGNRKLLVVNTHLGLRG-------------RERIRQMTTLLNPGWLRGTT 152 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 + +P ++ GDFN + +++ + + + +D+ Sbjct: 153 DEPLPTILCGDFNAIPSSAT-YRLAARSLKDAQLA-----GSAAPRATFPSRYPLMRLDH 206 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + SDH P+ + F Sbjct: 207 IFVTDDLIVKQAAV----------LENRLTRIASDHLPLLAEIGF 241 >gi|295687845|ref|YP_003591538.1| endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] gi|295429748|gb|ADG08920.1| Endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] Length = 259 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 90/284 (31%), Gaps = 42/284 (14%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + +RL+++N++ + D + + D+V LQE+ A Sbjct: 2 KTLRLMTYNVHRCVGADR-----------KLDVERVAEVIAAERPDVVALQELDVRRART 50 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + H +++ A+ ++ L Sbjct: 51 RGVDQAHRLAELLKMSFHFHPAMAVEEELY-GDAILTALPERRIKA-KGLPLYRRVPGLE 108 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKK 199 R A+ + VE+ G K+ +++ HL +QA L DW+ Sbjct: 109 PRGALWIEVEVGGTKVQIINTHLGLVP-------------QEQKRQAAALLGPDWMGDD- 154 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 + P V+ GDFN D +P+ + ++ + ID+ Sbjct: 155 RWVAPGVVLGDFNATPYSATYRMLRTALRDAQAPSPAWPRPATATFPSSFPF---MRIDH 211 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + ++ + +R + SDH P+ +D + Sbjct: 212 VFLTKGLETRGVRSPYD----------ARARIASDHLPLVVDLE 245 >gi|218235530|ref|YP_002365468.1| sphingomyelin phosphodiesterase C [Bacillus cereus B4264] gi|218163487|gb|ACK63479.1| sphingomyelin phosphodiesterase C [Bacillus cereus B4264] Length = 333 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 101/314 (32%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 VSTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + +I GD N +KT++ + Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 NDYSDHYPVEATIS 331 >gi|188989673|ref|YP_001901683.1| putative extracellular nuclease [Xanthomonas campestris pv. campestris str. B100] gi|167731433|emb|CAP49608.1| putative extracellular nuclease [Xanthomonas campestris pv. campestris] Length = 572 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 49/323 (15%), Positives = 93/323 (28%), Gaps = 35/323 (10%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60 L L P V +R+ S+N+ G + ++ + L Sbjct: 256 LTLPALPAPVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 315 Query: 61 AKNLDADIVFLQEMGSYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L AD+ L E+ + AVA++ R ++ ++ I I Sbjct: 316 IVPLQADVAALMELENDGNDGDTAVAQLVAALNAAGKDKDWRFVDSGSGPGDDAIRVGIV 375 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLE 174 R V + + L G +R + + G V+ H KS ++ Sbjct: 376 YRSTQVTPVGKPATLTGGPFDSH---SRVPLAQAFRSSRGATFVVVANHFKSKGCGNASG 432 Query: 175 NTYSP------SCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWK 226 + ++ A+ L W+ V+ GDFN Sbjct: 433 ADADQHDGQACWNATRTESAKRLHQWLQSDPTGAQTKLAVLLGDFNAYAMETPMRS---- 488 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + + F + + +D+ ++ K L + I + D Sbjct: 489 -LRASGWQDAFAVVGVKQPYSYVYDGMSGRLDHALLSPAMAKQLRGAAEWHINADAMDDA 547 Query: 287 SRG-------KRLSDHCPISIDY 302 R SDH P+ + + Sbjct: 548 GYAKRNLPGPWRSSDHDPVLLGF 570 >gi|21229733|ref|NP_635650.1| nuclease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766610|ref|YP_241372.1| nuclease [Xanthomonas campestris pv. campestris str. 8004] gi|21111221|gb|AAM39574.1| nuclease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66571942|gb|AAY47352.1| nuclease [Xanthomonas campestris pv. campestris str. 8004] Length = 606 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 49/323 (15%), Positives = 93/323 (28%), Gaps = 35/323 (10%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60 L L P V +R+ S+N+ G + ++ + L Sbjct: 290 LTLPALPAPVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 349 Query: 61 AKNLDADIVFLQEMGSYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L AD+ L E+ + AVA++ R ++ ++ I I Sbjct: 350 IVPLQADVAALMELENDGNDGDTAVAQLVAALNAAGKDKDWRFVDSGSGPGDDAIRVGIV 409 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLE 174 R V + + L G +R + + G V+ H KS ++ Sbjct: 410 YRSTQVTPVGKPATLTGGPFDSH---SRVPLAQAFRSSRGATFVVVANHFKSKGCGNASG 466 Query: 175 NTYSP------SCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWK 226 + ++ A+ L W+ V+ GDFN Sbjct: 467 ADADQHDGQACWNATRTESAKRLHQWLQSDPTGAQTKLAVLLGDFNAYAMETPMRS---- 522 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + + F + + +D+ ++ K L + I + D Sbjct: 523 -LRASGWQDAFAVVGVKQPYSYVYDGMSGRLDHALLSPAMAKQLRGAAEWHINADAMDDA 581 Query: 287 SRG-------KRLSDHCPISIDY 302 R SDH P+ + + Sbjct: 582 GYAKRNLPGPWRSSDHDPVLLGF 604 >gi|228963775|ref|ZP_04124916.1| Sphingomyelinase C [Bacillus thuringiensis serovar sotto str. T04001] gi|228795920|gb|EEM43387.1| Sphingomyelinase C [Bacillus thuringiensis serovar sotto str. T04001] Length = 333 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 101/314 (32%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + +I GD N +KT++ + Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINTENKNDSEYASMFKTLNASVPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPPYIENKVLQPKSPQWTVTSWFQKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 NDYSDHYPVEATIS 331 >gi|325856403|ref|ZP_08172119.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola CRIS 18C-A] gi|325483587|gb|EGC86559.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola CRIS 18C-A] Length = 291 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 35/307 (11%), Positives = 80/307 (26%), Gaps = 28/307 (9%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 I + L+ ++ + AQ++ + ++NI + + L + Sbjct: 8 IMYRLTTLILAMLLTCSLSAQQLYVGTYNIRYDNPNDRKEGNA-----WAQRCPQLCDFI 62 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + QE+ + + + + + + Sbjct: 63 NFEQPAVFGTQEVLATQLRDLLQGLEGYAYIGVGRDDGREEGEYAAIFYRKDLLKLLDSG 122 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSP 179 P + + A R E GK+ + + H+ Sbjct: 123 NFWLSQTPERPSL-GWDAACIRICTWGKFEDKTTGKQFYFFNTHM-----DHVGTVARRE 176 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 S L+ Q+ L P ++ GDFN I + + Sbjct: 177 STRLILQRIGQLAK--------SQPTILTGDFNVDQTDEIYGIFSRSGILRDCYAHARQR 228 Query: 240 EKDSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + ++ ID+ + + I N + + +SDH P Sbjct: 229 MAPTGTWNDFMQDSRSNARIDHVFVSSDFDIQHYA-----IFTNSYWLGKSRRNISDHYP 283 Query: 298 ISIDYDF 304 + + F Sbjct: 284 VMVKLSF 290 >gi|296501428|ref|YP_003663128.1| sphingomyelin phosphodiesterase [Bacillus thuringiensis BMB171] gi|296322480|gb|ADH05408.1| sphingomyelin phosphodiesterase [Bacillus thuringiensis BMB171] Length = 333 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 102/314 (32%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + +I GD N N +KT++ + Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 NDYSDHYPVEATIS 331 >gi|284039609|ref|YP_003389539.1| endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74] gi|283818902|gb|ADB40740.1| Endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74] Length = 299 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 85/303 (28%), Gaps = 32/303 (10%) Query: 2 IRKYVLALVFFLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 +R + L+ L+ + AQ + + ++N+ ++ +G++ W N ++ Sbjct: 20 MRILIFVLLSSLMLTQTTFAQKDTPINVATYNLRYNNKGDGINAWPNRK-------ENVK 72 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + + D+ QE + + V N + + + S Sbjct: 73 ALIRFHEFDLFGTQEAL-RDQLNDVAELNEFAFLGAGRDDGKEAGEHSAVFYRKDRFKPL 131 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 ++ P K + NR K + F Sbjct: 132 QSGNFWLSETPDKPGKGWDATCCNRICSWAKFNDLKTKKDFYFFSVH---FDHQGVEARR 188 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 S L+ ++ + + P ++ GD N + D +D P Sbjct: 189 QSGKLMVEKIKEIAK--------NTPVILVGDLNSTPDTEQVRTIKTLLNDAHDVTKMPP 240 Query: 239 KEKDSRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + N+ K IDY + F + Y + SDH P Sbjct: 241 YGPEGTFNSFKFDAPMDNRIDYIFTSKQ---------FDVLKYGVLTDAKEQRYPSDHQP 291 Query: 298 ISI 300 + Sbjct: 292 VVA 294 >gi|322421580|ref|YP_004200803.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M18] gi|320127967|gb|ADW15527.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M18] Length = 258 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 36/282 (12%), Positives = 89/282 (31%), Gaps = 44/282 (15%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++N++ L+ + + + Q DI+ LQE+ + + Sbjct: 7 TFTVMTYNVHRLTGNDRHTS-----------AARVAQVIDTYRPDIIALQELPGARSRPE 55 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + L V ++ L ++ L ++ + Sbjct: 56 -VGGACQDLAHELALLAPRENHYQMERERWGNVVFSRHPMRLVRAG-GLHPENRYRTMVP 113 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKKE 200 R + + ++I G+K+ +++ HL + QA+ L +W+ E Sbjct: 114 RGVLWVEIDICGQKLQLVNTHLGLTP-------------RERNYQAKVLAGPEWLA-HPE 159 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 P ++ GDFN ++ + +D +SL + + D+ Sbjct: 160 CRPPVLLCGDFNALPSWSIHKRLKNALMDEQESLKF-----GHTKFTFPSNLPIVRFDHI 214 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + +++ SDH P+ + Sbjct: 215 FISPDLAVESELIPRTKLTTV----------ASDHLPLIVKL 246 >gi|225870288|ref|YP_002746235.1| endonuclease/exonuclease/phosphatase family surface anchored protein [Streptococcus equi subsp. equi 4047] gi|225699692|emb|CAW93409.1| endonuclease/exonuclease/phosphatase family surface anchored protein [Streptococcus equi subsp. equi 4047] Length = 926 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 87/323 (26%), Gaps = 59/323 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80 K+ + S+NI S + + + + +L+ DI+ L E+ N Sbjct: 556 KLSIASYNIENFSANPSSTKD--------EKVRRIAESFIYDLNAPDIIGLIEVQDNNGP 607 Query: 81 A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 K + + N ++I T + V Sbjct: 608 TDDGTTDATQSAQRLIDAIKALGGPAYQ-YVDIAPENNADGGQPGSNIRTGFLYQPGRVS 666 Query: 123 VLQQSYPLLGAKDSFSRAGN-----------------RRAVELLVEINGKKIWVLDIHLK 165 + + + + R+++ G K+ V+ HL Sbjct: 667 LSDKPRGGVNDAVKWVNGELSLSVGRIDPTNPAWNSVRKSLAAEFIFQGHKVVVVANHLN 726 Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 S +SL S A+ L + + V+ GDFN Sbjct: 727 SKRGDNSLYGRVQPVTFKSEERRHVLARLLSQFTKEGASQQANIVMLGDFNDYEFTKTI- 785 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 K I+ D + + S + N +D ++ +N + Sbjct: 786 ----KLIEEGDMANLVSRHELSDRYSYFYRGNNQTLDNMLVSRNLLGRYEFDMVHV---- 837 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 838 NSPFMEAHGRASDHDPLLLQLSF 860 >gi|75759565|ref|ZP_00739653.1| Sphingomyelin phosphodiesterase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74492943|gb|EAO56071.1| Sphingomyelin phosphodiesterase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 329 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 101/314 (32%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 25 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 78 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 79 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKKLGNYSSSTPEDGGVAIVSKWPIAEKI 138 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + I V+ HL++ DS+ SP+ S+ + Sbjct: 139 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFIHVIGTHLQA---EDSMCGKTSPA-SVRTN 193 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + +I GD N +KT++ + Sbjct: 194 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYTSMFKTLNASVPSYTGHTA 253 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 254 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 313 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 314 NDYSDHYPVEATIS 327 >gi|15674798|ref|NP_268972.1| hypothetical protein SPy_0747 [Streptococcus pyogenes M1 GAS] gi|71910384|ref|YP_281934.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS5005] gi|13621927|gb|AAK33693.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS] gi|71853166|gb|AAZ51189.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS5005] Length = 910 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 90/323 (27%), Gaps = 59/323 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80 K+ + S+NI S + + + + +L+ DI+ L E+ N Sbjct: 548 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 599 Query: 81 A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 K T+ + N +I T + + V Sbjct: 600 TDDGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVS 658 Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 + + + + R+++ G+K+ V+ HL Sbjct: 659 LSDKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLN 718 Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 S ++L S A L + + + V+ GDFN Sbjct: 719 SKRGDNALYGCVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI- 777 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + I+ D + + S + + N +D ++ ++ + Sbjct: 778 ----QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRHLLDHYEFDMVHV---- 829 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 830 NSPFMEAHGRASDHDPLLLQLSF 852 >gi|88854827|ref|ZP_01129493.1| probable 5'-nucleotidase precursor [marine actinobacterium PHSC20C1] gi|88815988|gb|EAR25844.1| probable 5'-nucleotidase precursor [marine actinobacterium PHSC20C1] Length = 1422 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 88/317 (27%), Gaps = 34/317 (10%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT----LLRQYAKNLDADIV 69 V V ++ ++N+ T + + +LDAD+V Sbjct: 306 VASAPLVGGDFKVSAFNVFNYFTTLKSEDPDARGASTAEQFAIQQSKIVAAINSLDADVV 365 Query: 70 FLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--HTAIAVRKK 119 LQE+ + A+ + T + ++ I A+ K Sbjct: 366 GLQEIENSIKLGGGLDEALMDLVGALNAAAGAGTWDYVRTPAELNDAAITDFITNAIIFK 425 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS- 178 V ++ R + + NG+ I V+ H KS + Sbjct: 426 PASVTPVGDSFTQVDETVWDIA-REPIAQTFDSNGELITVIANHFKSKGGSGAEPADGQG 484 Query: 179 PSCSLLSQQA---QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 + +QA + L D I+ V+ GDFN + + Sbjct: 485 RFNTERVEQATAVKALVDTISADSAKSDQVVLVGDFNSYSEEDPV-----QVFTSAGYVD 539 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289 D + +D+ ++ + + + I E + Sbjct: 540 TLAASTDGQ-YTYTFDGELGSLDHIIVSPSLADKVTDAAVWNINSPEWGDRGYAFGATEA 598 Query: 290 ---KRLSDHCPISIDYD 303 R SDH PISI Sbjct: 599 GTVFRSSDHDPISIGLS 615 >gi|229149012|ref|ZP_04277257.1| Sphingomyelinase C [Bacillus cereus m1550] gi|228634552|gb|EEK91136.1| Sphingomyelinase C [Bacillus cereus m1550] Length = 333 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 100/314 (31%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + D Y K + D+V L E+ Sbjct: 29 VSTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERVDLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + I V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFIHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + +I GD N +KT++ + Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 NDYSDHYPVEATIS 331 >gi|229068359|ref|ZP_04201662.1| Sphingomyelinase C [Bacillus cereus F65185] gi|228714820|gb|EEL66692.1| Sphingomyelinase C [Bacillus cereus F65185] Length = 333 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 101/314 (32%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + +I GD N +KT++ + Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 NDYSDHYPVEATIS 331 >gi|29349191|ref|NP_812694.1| hypothetical protein BT_3783 [Bacteroides thetaiotaomicron VPI-5482] gi|29341099|gb|AAO78888.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides thetaiotaomicron VPI-5482] Length = 315 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 38/324 (11%), Positives = 83/324 (25%), Gaps = 35/324 (10%) Query: 1 MIRKYVLALVF---FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 M + +L +V C + + + S+N+ + + Y ++ Sbjct: 1 MKLRNLLFIVLAAIVFCNCQSYQPTSLTVASYNLRNANGSDSARGDG-----WGQRYPVI 55 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 Q + D DI QE + + S T Sbjct: 56 AQMVQYHDFDIFGTQECFLHQLKDMKEALPGYDYIGVGRDDGKDKGEHSAIFYRTDKFDI 115 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + P + +K + R + L +L + Sbjct: 116 VEKGDFWLSETPDVPSK-GWDAVLPRICSWGHFKCKDTGFEFLFFNLHM---DHIGKKAR 171 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-TIDPNDSLIR 236 S L+ ++ + L +P ++ GDFN + + K + + Sbjct: 172 VESAFLVQEKMKELGR------GKNLPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKCD 225 Query: 237 FPKEKDSRCNANKNLRNK-IPIDYFVMDQNAYKFL---------------IQESFSEILY 280 + + N ID+ + + + +E + Sbjct: 226 YRYALNGTFNNFDPNSFTESRIDHIFVSPSFHVKRYGVLTDTYRSVRENSKKEDVRDCPE 285 Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304 + SDH P+ ++ F Sbjct: 286 EITIKAYEARTPSDHFPVKVELVF 309 >gi|327189443|gb|EGE56605.1| putative metal-dependent hydrolase protein [Rhizobium etli CNPAF512] Length = 239 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 86/286 (30%), Gaps = 54/286 (18%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + ++L+++N+++ + D + ADIV LQE+ Sbjct: 4 KSIKLLTYNVHSCIGNDR-----------KLDPGRIASVIAEAGADIVALQEV-----RR 47 Query: 82 KVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + + S ++ H S + A+ ++ PL Sbjct: 48 RTGGIDQAYLIASLLKMQAHFHPALSVAEEQYGDAIITALPTSAVKAGPLPSIG------ 101 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD--WITQK 198 R A+ + V + +K+ V++ HL +Q L + W+ Sbjct: 102 EQRGALSVEVLVGDRKLLVVNTHLGLRG-------------RERIRQMTTLLNSGWLRGA 148 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 E +P V+ GDFN + +++ + + + +D Sbjct: 149 MEEPLPCVLCGDFNAIPSSAT-YRLVARSLKDAQL-----GGTAAPRATFPSRYPLMRLD 202 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + K SDH P+ + F Sbjct: 203 HIFVTDDLVVKRAAV----------LQNRLTKVASDHLPLFAEISF 238 >gi|229077987|ref|ZP_04210596.1| Sphingomyelinase C [Bacillus cereus Rock4-2] gi|228705325|gb|EEL57702.1| Sphingomyelinase C [Bacillus cereus Rock4-2] Length = 333 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 101/314 (32%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSPN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + +I GD N +KT++ + Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPQSPQWTVTSWFQKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 NDYSDHYPVEATIS 331 >gi|45124783|emb|CAF33353.1| sphingomyelinase C [Bacillus cereus] Length = 338 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 101/314 (32%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 34 VSTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 87 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 88 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 147 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 148 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 202 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + +I GD N +KT++ + Sbjct: 203 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGHTA 262 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 263 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 322 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 323 NDYSDHYPVEATIS 336 >gi|282880129|ref|ZP_06288849.1| endonuclease/exonuclease/phosphatase family protein [Prevotella timonensis CRIS 5C-B1] gi|281306002|gb|EFA98042.1| endonuclease/exonuclease/phosphatase family protein [Prevotella timonensis CRIS 5C-B1] Length = 311 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 36/320 (11%), Positives = 80/320 (25%), Gaps = 34/320 (10%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K+ L VF L AQ + + ++N+ +E + T ++ + Sbjct: 1 MKKFALT-VFILTASLCIQAQNLFVATYNLRYDNEDDRQEGNG-----WTKRCQVICDFL 54 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 DI QE + + + S Sbjct: 55 NFEQPDIFGTQEGLKHQLEDLKRGLDQYDYIGIGREDGKEQGEHSAIFYKKDKLKCFDKG 114 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 P + A R + +L Sbjct: 115 NFWLNETPEKPVL-GWDAACVRICTWGKFRDWKTNLTFYFFNLHMDHVG----------V 163 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + A+ + I + + P ++ GDFN + I + + + Sbjct: 164 VARREAAKLVIKKIKEIAGNNAPVILTGDFNVDQHDEIYKIFSESGILKDSYVAAKHRFA 223 Query: 242 DSRCNANKNLRNK--IPIDYFVMDQNAYK---FLIQESFSEILYNEDDIKSRG------- 289 ++ + + K ID+ + + +++ +KS Sbjct: 224 ENGTFQDFDSSMKSESRIDHIFVSNKFEVNNYAIHTDAYWTANEKMPKLKSGNAPKELEF 283 Query: 290 -----KRLSDHCPISIDYDF 304 + SDH P+ + Sbjct: 284 QQYTHRLPSDHYPVLAKIRY 303 >gi|228906427|ref|ZP_04070310.1| Sphingomyelinase C [Bacillus thuringiensis IBL 200] gi|228853243|gb|EEM98017.1| Sphingomyelinase C [Bacillus thuringiensis IBL 200] Length = 333 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 102/314 (32%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + +I GD N N +KT++ + Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 NDYSDHYPVEATIS 331 >gi|223040783|ref|ZP_03611050.1| putative endonuclease/exonuclease/phosphatase [Campylobacter rectus RM3267] gi|222877973|gb|EEF13087.1| putative endonuclease/exonuclease/phosphatase [Campylobacter rectus RM3267] Length = 445 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 107/310 (34%), Gaps = 56/310 (18%) Query: 6 VLALVFFLVPCTASVAQ-KVRLVSWNINTLSE--QEGVSLWKNSVKRTT-------SDYT 55 + AL+F + A ++++ ++N L + +G V ++ + + Sbjct: 8 LFALIFAALFFVVFAAGAELKIATFNAQNLFDAKNDGSEYKDFVVGKSEWSEKKASAKFK 67 Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + K L+ADI+ LQE+ + + ++ + ++ F + +A Sbjct: 68 TVSAKIKELNADIIALQEIENEQILKELMREASYKYFAFSNSKNGP----------VGLA 117 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 V + + + + R + L E+NG+K +L++H + Sbjct: 118 VLSRVKPEKTRIFSVP-------NVKTRDILRLDFEVNGQKFSLLNLHFPARKNP----- 165 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 +Q + + V+ GDFN D + + + + Sbjct: 166 ---------LKQRKTAFITLKSALTDTEKVVVLGDFNAPYGDKELLGDLAASKNLANLWV 216 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSD 294 PK + + + +D+ ++ ++ + + SF L G ++SD Sbjct: 217 FLPK------HERYSHTSNNALDHVLLSKDALSQNYVLNSFKVEL--------DGAQISD 262 Query: 295 HCPISIDYDF 304 H + +F Sbjct: 263 HFALVFRLNF 272 >gi|283779137|ref|YP_003369892.1| endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068] gi|283437590|gb|ADB16032.1| Endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068] Length = 307 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 45/316 (14%), Positives = 95/316 (30%), Gaps = 42/316 (13%) Query: 4 KYVLALVFFLVPCTASVA------QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 LA L+ + A Q +R++S+NI + ++G W + + Sbjct: 12 SISLAFAAVLLTNSGEAAEPTSEPQPLRVMSYNIRYGTARDGDDAWVHRQ-------EPM 64 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 +Y K DI+ LQE ++ + + S Sbjct: 65 VKYLKESKVDILGLQEALAFQISDLLEGLPEFKRSGVARDDGKDKGEFSPLLYRHERFEL 124 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + + + + R ++ + F + Sbjct: 125 VREGTFWLSATHEVVGSKGWDAMLPRVCSWTELKDKSTGKRFIAASTH---FDHMGQEAR 181 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF--------WKTID 229 + S L++++ + L +P V+ GDFN ++ + W+ +D Sbjct: 182 AESGKLIARRLKELAA--------DLPVVLVGDFNARLASDPIQNVLAKPDSASDWRLVD 233 Query: 230 PNDSLIRFPKEKDSRCNANKN-LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + P + N K ID+ + F++ + E Sbjct: 234 AQGVSAKKPTGPTATFNGFKAIPEGDNKIDFIFVR----DFVVLDHVVENPLT-----PA 284 Query: 289 GKRLSDHCPISIDYDF 304 G+ +SDH P+ + +F Sbjct: 285 GRFVSDHLPVIANIEF 300 >gi|327312514|ref|YP_004327951.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola F0289] gi|326944378|gb|AEA20263.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola F0289] Length = 290 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 36/308 (11%), Positives = 79/308 (25%), Gaps = 30/308 (9%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M R + L ++ + AQ++ + ++NI + + L + Sbjct: 1 MYR--LTTLFLAMLLTCSLSAQQLYVGTYNIRYDNPNDRKEGNA-----WAQRCPQLCDF 53 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + QE+ + + + + + + Sbjct: 54 INFEQPAVFGTQEVLATQLHDLLQGLEGYDYIGVGRDDGREEGEYAAIFYRKDLLKLLDS 113 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYS 178 P + + A R E GK+ + + H+ Sbjct: 114 GNFWLSQTPDHPSL-GWDAACIRICTWGKFEDKTTGKQFYFFNTHM-----DHVGTVARR 167 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 S L+ Q+ L P ++ GDFN I + Sbjct: 168 ESTRLILQRIGQLAK--------SQPTILTGDFNVDQTDEIYGIFSRSAILRDCYAHARQ 219 Query: 239 KEKDSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + + ++ ID+ + + I N + +SDH Sbjct: 220 RMAPTGTWNDFMQDSRSNARIDHVFVSSDFDIQHYA-----IFTNSYWFGKSRRNISDHY 274 Query: 297 PISIDYDF 304 P+ + F Sbjct: 275 PVMVKLSF 282 >gi|21241443|ref|NP_641025.1| hypothetical protein XAC0672 [Xanthomonas axonopodis pv. citri str. 306] gi|21106782|gb|AAM35561.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 287 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 89/307 (28%), Gaps = 37/307 (12%) Query: 4 KYVLALVFFLVPCTASVAQK----VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 + +LA+ ++A +R++S+N+ V + KR + Sbjct: 10 RCLLAIGALSCIALPALAGTPVAPLRVMSFNVR-------VPADTDGDKRWQVRRAAMVA 62 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 K D+ QE+ S A + F R + + + + Sbjct: 63 LIKQTHPDVFGTQELVSEQAAFLAEQLPDYRWFGQGRRGDDSDEHM-GVFYDARVLEVVE 121 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTY 177 + P ++ R A L E + ++ ++ + H D E Sbjct: 122 SGDFWLSDTPERAGSITWGNVLPRMATWALFERRSDKRRFYLFNTHFPYR---DEDEPAR 178 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 S L+ + L + +P V+ GDFN + + + Sbjct: 179 ERSARLILSRIAQL--------PATIPVVLTGDFNSDPD--KITYPTLTAVLRDARAQAS 228 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + ID+ + + D + G SDH P Sbjct: 229 KRSGPENTFQDFTTHPTRRIDWILYRG----------LRPSRFATLDDRPGGILPSDHYP 278 Query: 298 ISIDYDF 304 + ++++ Sbjct: 279 VMAEFEW 285 >gi|229171459|ref|ZP_04299043.1| Sphingomyelinase C [Bacillus cereus MM3] gi|228611997|gb|EEK69235.1| Sphingomyelinase C [Bacillus cereus MM3] Length = 333 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 102/314 (32%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTNQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 + +A ++ T E S+ +A+ K V + Sbjct: 83 NNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + + GD N N +KT+ + Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKEYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 NDYSDHYPVEATIS 331 >gi|262383745|ref|ZP_06076881.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262294643|gb|EEY82575.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 287 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 96/313 (30%), Gaps = 41/313 (13%) Query: 2 IRKYVLALVFFLVPCTASVA----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 +++ +L L+ L A +K+ ++S+NI + + + W + D+ Sbjct: 1 MKRILLCLMVVLFATGCLFAKNNDEKMNVMSYNIRYDNSGDKDNQW-----KFRRDFA-- 53 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 K +AD+ QE+ + + + + Sbjct: 54 ADLVKFHEADVFGAQEVLNNQLNDLLDRLPEYAYVGVGREDGKTKGEYAPIFYRKDRFSV 113 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLEN 175 +K+ K + A R A +++ GKK + L+ HL + Sbjct: 114 EKSGNFWLAEDINAVGKKGWDAACERVATWAILKDKNTGKKFFFLNTHL-----DHMGKV 168 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPN 231 SL+ +QA+ L +P ++ GDFN + + + + Sbjct: 169 ARHEGASLVLEQAKKL--------SENLPIIVTGDFNAVPSDEPIQVLTNPSDPRHLTHS 220 Query: 232 DSLIRFPKEKDSRCNAN--KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 ++ F + + + IDY + N + + Sbjct: 221 RTIAGFTYGPEWTFHDFGKIPYDKREWIDYIFVKGN---------IKVLRHGVLTETLNN 271 Query: 290 KRLSDHCPISIDY 302 SDHCP+ Sbjct: 272 LFPSDHCPVISTL 284 >gi|333031000|ref|ZP_08459061.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM 18011] gi|332741597|gb|EGJ72079.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM 18011] Length = 302 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 92/327 (28%), Gaps = 49/327 (14%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K L L FF+ +AQ +R+ S+NI +E + + +R Sbjct: 1 MKKLAL-LFFFIAVTLGGLAQDLRVGSYNIRYANEGDAQNGN-GWAQRCPVQIQ----LI 54 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + D++ QE+ + + + + I RK + Sbjct: 55 RYNAFDVLGTQEVLHPQLLDLLAGLPEYDYIGVGRDDGKTEGEYAP------IFYRKDKI 108 Query: 122 RVLQQSYPLLGAKDSFSRAG-----NRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174 L+ + L + ++ G R GK W ++H+ Sbjct: 109 ECLKSGHFWLSEETTYPNKGWDAALPRICTWGEFRDLKTGKSFWYFNLHMDHVG------ 162 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 A + IT+ P ++ GDFN + I + Sbjct: 163 ------VEARKHSASLVLSKITEMCGE-EPVILTGDFNVDQTHNSYKILHDSDILQDSYE 215 Query: 235 IRFPKEKDSRCNANKNLRNK--IPIDYFVMDQNAYKF---------------LIQESFSE 277 + + N+ + ID+ + + + Sbjct: 216 VAEICYALNGTFNAFNINLRTDSRIDHVFVSPTFQVKKYGVLTDTYRSTNKEIKTVHEGD 275 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + SDH P+ ++ +F Sbjct: 276 FPKEVSFEVNEARLPSDHFPLVVELNF 302 >gi|325920888|ref|ZP_08182783.1| putative extracellular nuclease [Xanthomonas gardneri ATCC 19865] gi|325548640|gb|EGD19599.1| putative extracellular nuclease [Xanthomonas gardneri ATCC 19865] Length = 572 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 88/324 (27%), Gaps = 35/324 (10%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60 L L V +R+ S+N+ G + ++ + L Sbjct: 256 LTLPAMPTAVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVST 315 Query: 61 AKNLDADIVFLQEMGSYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L AD+ L E+ + AVA++ + ++ ++ I I Sbjct: 316 IVPLRADVAALMELENDGNGADTAVAQLVAALNAAGKDKDWQFVDTGSGPGDDAIRVGIV 375 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKS-FCFLDSL 173 R V + + L G +R + G V+ H KS C S Sbjct: 376 YRSTQVTPVGKPATLTGGPFDSH---SRVPLAQAFRSTRGATFVVVANHFKSKGCGTASG 432 Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWK 226 + A+ L W+ V+ GDFN Sbjct: 433 ADADQRDGQACWNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYAMESPMRS---- 488 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + + F + + +D+ ++ K L I + D Sbjct: 489 -LRASGWQDAFAVAGVKQPYSYVYDGMSGRLDHALLSPAMAKQLRGAVEWHINADVMDDA 547 Query: 287 SRG-------KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 548 GYAKRNLAGPWRSSDHDPVLLGFS 571 >gi|323126982|gb|ADX24279.1| endonuclease/exonuclease/phosphatase family surface anchored protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 941 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 43/323 (13%), Positives = 83/323 (25%), Gaps = 59/323 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80 K+ + S+NI S + + + + +L+ DI+ L E+ N Sbjct: 563 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 614 Query: 81 AK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 T+ + N +I T + V Sbjct: 615 TDDGTTDATQSAQRLIDAIQKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPDRVS 673 Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 + + + + R+++ G K+ V+ HL Sbjct: 674 LSDKPKGGAKDALSWVNGELNLSVGRIDPTNPAWKDVRKSLAAEFVFQGNKVIVVANHLN 733 Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 S ++L S A L + + V+ GDFN Sbjct: 734 SKRGDNALYGRVQPVTFKSEERRHVLANMLAKFAKEGATHQANIVMLGDFNDYEFTKTI- 792 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + I+ D + + + N +D ++ N + Sbjct: 793 ----QLIEEGDMANLVSRHDLADRYSYFYQGNNQTLDNMLVSHNLLGQYEFDMVHV---- 844 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 845 NSPFMEVHGRASDHDPLLLQLSF 867 >gi|251782127|ref|YP_002996429.1| extracellular nuclease [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390756|dbj|BAH81215.1| extracellular nuclease [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 941 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 43/323 (13%), Positives = 83/323 (25%), Gaps = 59/323 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80 K+ + S+NI S + + + + +L+ DI+ L E+ N Sbjct: 563 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 614 Query: 81 AK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 T+ + N +I T + V Sbjct: 615 TDDGTTDATQSAQRLIDAIQKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPDRVS 673 Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 + + + + R+++ G K+ V+ HL Sbjct: 674 LSDKPKGGAKDALSWVNGELNLSVGRIDPTNPAWKDVRKSLAAEFVFQGNKVIVVANHLN 733 Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 S ++L S A L + + V+ GDFN Sbjct: 734 SKRGDNALYGRVQPVTFKSEERRHVLANMLAKFAKEGATHQANIVMLGDFNDYEFTKTI- 792 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + I+ D + + + N +D ++ N + Sbjct: 793 ----QLIEEGDMANLVSRHDLADRYSYFYQGNNQTLDNMLVSHNLLGQYEFDMVHV---- 844 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 845 NSPFMEVHGRASDHDPLLLQLSF 867 >gi|327537315|gb|EGF24049.1| endonuclease/exonuclease/phosphatase family protein [Rhodopirellula baltica WH47] Length = 275 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 86/288 (29%), Gaps = 32/288 (11%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + +++N+ L+ + L R + + AD+ LQE+ Sbjct: 14 ADESFTAMTYNVRYLNTHDRQDL---WSMRRSKVIETIAS------ADVAGLQEVTVQQL 64 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 W + + + + P + + Sbjct: 65 HDIQEGTPEWTWYGVGRDDGKEGGEFAPIGYRHDRFEAMDHGTLWLSETPTVVGSKGWDA 124 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 A R +++ +K+ + + + F +N S L++ + + Sbjct: 125 ALPRTMTWMVLR---RKLDRAEFLVINSHFDHRGQNAREQSGRLVAAEVDQ--------R 173 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + +P ++ GDFN + K +D D + P N K ++ Sbjct: 174 ATDLPVIVMGDFNAMPDSAPLKALQSGEKVKLLDARDEVDGKPTGPTGTWNGFKAIQPDR 233 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID+ +++ + D G+ SDH PI+I D Sbjct: 234 RIDHVLVNDRV--------VVQEYRTLDPRTEAGRYASDHLPIAIRID 273 >gi|229016371|ref|ZP_04173315.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273] gi|229022601|ref|ZP_04179127.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272] gi|228738692|gb|EEL89162.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272] gi|228744927|gb|EEL94985.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273] Length = 788 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 84/312 (26%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 AINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVIANHLNSKLGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ QKK + P V+ GD N + Sbjct: 661 QPLVLKSEEKRVQLAQEVNQFVQGIQKKNTNAPVVVLGDMNDFEFSKPLEALQGTILKD- 719 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 720 ----MLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|218901872|ref|YP_002449706.1| sphingomyelin phosphodiesterase C [Bacillus cereus AH820] gi|218535992|gb|ACK88390.1| sphingomyelin phosphodiesterase C [Bacillus cereus AH820] Length = 333 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 99/314 (31%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTNQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + + GD N N +KT+ + Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 NDYSDHYPVEATIS 331 >gi|329928380|ref|ZP_08282250.1| 5'-nucleotidase, C-terminal domain protein [Paenibacillus sp. HGF5] gi|328937816|gb|EGG34222.1| 5'-nucleotidase, C-terminal domain protein [Paenibacillus sp. HGF5] Length = 2084 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 47/329 (14%), Positives = 92/329 (27%), Gaps = 65/329 (19%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A+++R+ ++NI S + + K+ DI+ L E+ N Sbjct: 824 AEQLRVATYNIENF-------YPGVSSAKINKLAESIVNNIKS--PDIIGLVEVQDNNGE 874 Query: 81 A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 K T+ F E + N+ +I V+ Sbjct: 875 QNNGTTAADQSYQTLINAIKAAGGPTY-SFTDIEPVNNNDGGAPGANIRVGFLYNADRVQ 933 Query: 123 VLQQS----------------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 + P + + +R+ + E G+K+ V+ Sbjct: 934 LTDSVQGKKGSPTESVAYDAATDQLTLNPGRIDPQNAAFNASRKPLAAQFEFQGEKVIVI 993 Query: 161 DIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRK 214 H S P S + Q A + ++ V+ GD N Sbjct: 994 ANHFNSKSGDQGPFGNTQPPVLSSETQRHQIAAVVNGFVKDVVSANPDANVVVLGDLNDF 1053 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 N + N+ N +D+ ++ +N + + Sbjct: 1054 QFTETTN-----ILKGNELDNLIETLPLKEQYTYTYDGNSQVLDHILVSKNL----TRST 1104 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +I++ D + R+SDH P+ D Sbjct: 1105 QVDIVHLNADFPASKGRVSDHDPVVAQID 1133 >gi|229028475|ref|ZP_04184596.1| Sphingomyelinase C [Bacillus cereus AH1271] gi|228732856|gb|EEL83717.1| Sphingomyelinase C [Bacillus cereus AH1271] Length = 333 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 101/314 (32%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTNQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + + GD N N +KT+ + Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 NDYSDHYPVEATIS 331 >gi|326798495|ref|YP_004316314.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] gi|326549259|gb|ADZ77644.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] Length = 268 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 49/300 (16%), Positives = 89/300 (29%), Gaps = 47/300 (15%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 +L +F TA+ +R++++NI+ + L D + Sbjct: 15 LLQFIFGAEIVTANEKDTLRIITYNIHHANPPSKPGL---------IDLEAIAAVINQNK 65 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 D+V LQE+ N + + T + K +A+ K + Sbjct: 66 PDLVALQEVDVNNRRSGKNLNEAAALGSLTGMHHHFVKAIDYEGGAYGVAILSKWPIQQK 125 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 S L A+ S R + VE GK + HL Sbjct: 126 DSLILPMAEGS--NGEPRVLAIVAVEPKPGKPLVFASTHLDLK-------------EQNR 170 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 QA+ + ++ P ++ GDFN K I+ D+ K S Sbjct: 171 LLQAEAIVKKLSTYS---QPVILGGDFNAKPESD--------VINHFDTYFSRSKTSGSA 219 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + ID+ + ++ + Y SDH P+ ++ + Sbjct: 220 AFTIPEVNPDREIDFIMFRPKKRFQSVRHEVIKEPY-----------ASDHLPVMVELTY 268 >gi|253566723|ref|ZP_04844175.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251944286|gb|EES84775.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 287 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 88/316 (27%), Gaps = 42/316 (13%) Query: 1 MIRKYVLALVFFLVPC-----TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55 M + +L L FF C AS + V ++S+NI + ++ + W+ R Sbjct: 1 MEKIILLVLPFFAASCGLVKQQASAPEPVNVMSFNIRYDNPEDSLDNWRYRKDR------ 54 Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + D DI+ QE+ + + S Sbjct: 55 -VANAIHFYDVDILGTQEVLHNQLEDLKLRLPEYGVVGVGREDGKEKGEYSALWYKKDRF 113 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSL 173 + P + + A R A + + +++ K+ + L+ HL Sbjct: 114 NVLDSGYFWLSETPEVAGSKGWDGACERIASWVKLQDKVSDKEYFALNTHL-----DHVG 168 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTID 229 SL+ + L D +P ++ GDFN + + + Sbjct: 169 GMARREGISLMLDRVNELSD--------GLPVIVTGDFNSEPESDVIKHVTDSANPEHLT 220 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + + IDY + + Y Sbjct: 221 DARQASSIVYGPSWSFHDFGKIPYNKRPLIDYVFVRNGL---------KVLRYGILAETE 271 Query: 288 RGKRLSDHCPISIDYD 303 LSDH P+ + + Sbjct: 272 NNGFLSDHTPVLVTVE 287 >gi|265763129|ref|ZP_06091697.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263255737|gb|EEZ27083.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 287 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 88/316 (27%), Gaps = 42/316 (13%) Query: 1 MIRKYVLALVFFLVPC-----TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55 M + +L L FF C AS + V ++S+NI + ++ + W+ R Sbjct: 1 MEKIILLVLPFFAASCGLVKQQASAPEPVNVMSFNIRYDNPEDSLDNWRYRKDR------ 54 Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + D DI+ QE+ + + S Sbjct: 55 -VANAIHFYDVDILGTQEVLHNQLEDLKLRLPEYGVVGVGREDGKEKGEYSALWYKKDRF 113 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSL 173 + P + + A R A + + +++ K+ + L+ HL Sbjct: 114 NVLDSGYFWLSETPEVAGSKGWDGACERIASWVKLQDKVSDKEYFALNTHL-----DHVG 168 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTID 229 SL+ + L D +P ++ GDFN + + + Sbjct: 169 GMARREGISLMLDRVNELSD--------GLPVIVTGDFNSEPESDVIKHVTDSVNPEHLT 220 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + + IDY + + Y Sbjct: 221 DARQASSIVYGPSWSFHDFGKIPYNKRPLIDYVFVRNGL---------KVLRYGILAETE 271 Query: 288 RGKRLSDHCPISIDYD 303 LSDH P+ + + Sbjct: 272 NNGFLSDHTPVLVTVE 287 >gi|86141529|ref|ZP_01060075.1| hypothetical protein MED217_05907 [Leeuwenhoekiella blandensis MED217] gi|85832088|gb|EAQ50543.1| hypothetical protein MED217_05907 [Leeuwenhoekiella blandensis MED217] Length = 285 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 84/310 (27%), Gaps = 44/310 (14%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 AL+ F +++ + S+NI S +G+++W L + Sbjct: 6 SIAFALLLFSSANAQKSKRELVISSFNIRYNSPDDGINIW-------EQRKDWLTHSIRF 58 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 AD++ QE+ + + + + + ++AI +K+ V Sbjct: 59 HQADLIGTQEVTHTQLLDMEVLLPNYA-------HVGIGREGATQGEYSAIFYKKERFEV 111 Query: 124 LQ------QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 L P + A + A R L + + + Sbjct: 112 LDSNTFWLSETPDVVASKGWDAALPRIVTWALFKDKHSGVSFFHFNTHF----------D 161 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 A L I + P ++ GDFN + + Sbjct: 162 HRGKQARIASAALLTQKIKE-ITGTSPVLLTGDFNSSPKTEAIATLLSSGLKDPYLNLDA 220 Query: 238 PKEKDSRCNANKN----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + +AN + IDY + D + + +S Sbjct: 221 DQIYGPEYSANGWDATGRTSDSRIDYIFYSG---------GVQPLTLQILDGQRGERYIS 271 Query: 294 DHCPISIDYD 303 DH P+ + Sbjct: 272 DHFPVIAKVE 281 >gi|323344671|ref|ZP_08084895.1| endonuclease/exonuclease/phosphatase [Prevotella oralis ATCC 33269] gi|323093941|gb|EFZ36518.1| endonuclease/exonuclease/phosphatase [Prevotella oralis ATCC 33269] Length = 305 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 35/321 (10%), Positives = 84/321 (26%), Gaps = 35/321 (10%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M ++++L F AQ + + ++NI ++ + + ++ Sbjct: 1 MKKQFILIFCLFCAI--GIQAQNLFVGTYNIRYDNDGDKKEGNG-----WERRWPIICDM 53 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + DI QE + + + ++ Sbjct: 54 LNFEEPDIFGTQEAKVNQIHDLQKGLEGYNYIGVGRDDGKEKGEYAAIFYKKDKLTKIRS 113 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 P K + A R N K+ +L Sbjct: 114 GNFWLNETPD-KPKLGWDAACIRICTWGEFMDNKDKLKFYFFNLHM----------DHIG 162 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + A+ + I + P ++ GDFN N I + + Sbjct: 163 VVARRESAKLVIRKIKEITGGNAPVILTGDFNVDQNDEIFKIFSASGILKDSYSAAKMRF 222 Query: 241 KDSRCNANKNLRNK--IPIDYFVMDQNAYKF---LIQESFSEILYNEDDIKSRG------ 289 ++ + + K ID+ + ++ + +++++ S Sbjct: 223 AENGTFNDFDTELKTESRIDHIFVSPKFNVKRYGVLTNGYWTEKGSKENLSSNKAPKELK 282 Query: 290 ------KRLSDHCPISIDYDF 304 + SDH P+ + + Sbjct: 283 FKKYARRTPSDHYPVLVKIAY 303 >gi|229917556|ref|YP_002886202.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b] gi|229468985|gb|ACQ70757.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b] Length = 1168 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 39/333 (11%), Positives = 85/333 (25%), Gaps = 60/333 (18%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIVFLQE 73 + ++ + S+N+ S + L + + L+ DI+ + E Sbjct: 737 TFIEAEEDQLTIASYNLENFSNNIKETSD-------EKALKLAKAFVNELNSPDIIGVTE 789 Query: 74 MGSYNAVAK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + + K T+ + + + N + +I Sbjct: 790 VQDNDGQDKGAGSAADQSYQRLIDNIVAVGGKTYK-YVNIDPENNQDGGAPDANIRVGFL 848 Query: 116 VRKKNVRVLQ------------------QSYPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 + V + + P + + + +R+ + + G+ + Sbjct: 849 YDPERVSLTEGIPAGDATTAVGYADGKLTHNPGRIDPMNEAFSRSRKPLAAQFDFQGENV 908 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK------KESLVPFVIAGDF 211 V+ H S + P Q + + + K V GDF Sbjct: 909 IVIANHWNSKGGDTGFFGSQQPVVLGSEVQRKKIAQVVHNFVADVKTKNPEANVVALGDF 968 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N D + + K + N +D+ ++ Sbjct: 969 NDF-----EFSDALQIFKGDLMTNMVEKVPAVDRYSYVYQGNSQVLDHILVSNRLAASTK 1023 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + D R SDH P+ DF Sbjct: 1024 IDMIHV----NSDFTEMSGRASDHDPVLAQIDF 1052 >gi|325279089|ref|YP_004251631.1| Endonuclease/exonuclease/phosphatase [Odoribacter splanchnicus DSM 20712] gi|324310898|gb|ADY31451.1| Endonuclease/exonuclease/phosphatase [Odoribacter splanchnicus DSM 20712] Length = 286 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 39/308 (12%), Positives = 86/308 (27%), Gaps = 31/308 (10%) Query: 1 MIRKY-VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 M + L L + CT + +RL ++NI + +G + W + + Sbjct: 1 MKNLFSTLILSLLALGCTQQQPESLRLATFNIRYDNSGDGPNSWPHRK-------DSICA 53 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 + +D DI+ +QE+ + + + + + A Sbjct: 54 FIHRVDPDIIDMQEVLHHQLEVLKTGLPEYTVVGVGREDGKTAGEYAPIFFKQAKYTLLD 113 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 P + A R A + ++ ++ ++ F Sbjct: 114 QNTFWLCEKPDSVGMVGWDAALTRIATWVKLQDKKTGQILMVVNTH---FDHIGTEARRN 170 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 S L+ ++ + + P ++ GDFN ++ D+ K Sbjct: 171 SALLIIEKIKEIV--------GTSPAILTGDFNVSEDWDAYKTITNNEFILKDAHKVAGK 222 Query: 240 EKDSRCNANKNLR----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + ID+ + Y + LSDH Sbjct: 223 RTGVDFTYHNFGKIPAEKCEKIDFIFVTPQIRV--------ISSYIPFSQLNDTLFLSDH 274 Query: 296 CPISIDYD 303 P ++ + Sbjct: 275 NPEIVELE 282 >gi|322411464|gb|EFY02372.1| endonuclease/exonuclease/phosphatase family surface anchored protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 941 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 43/323 (13%), Positives = 84/323 (26%), Gaps = 59/323 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80 K+ + S+NI S + + + + +L+ DI+ L E+ N Sbjct: 563 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 614 Query: 81 AK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 T+ + N +I T + V Sbjct: 615 TDDGTTDATQSAQRLIDAIQKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPDRVS 673 Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 + + + + R+++ G K+ V+ HL Sbjct: 674 LSDKPKGGAKDALSWVNGELNLSVGRIDPTNPAWKDVRKSLAAEFVFQGNKVIVVANHLN 733 Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 S ++L S A L + + V+ GDFN Sbjct: 734 SKRGDNALYGRVQPVTFKSEERRHVLANMLAKFAKEGATHQANIVMLGDFNDYEFTKTI- 792 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + I+ D + + + N +D ++ +N + Sbjct: 793 ----QLIEEGDMANLVSRHDLADRYSYFYQGNNQTLDNMLVSRNLLGQYEFDMVHV---- 844 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 845 NSPFMEIHGRASDHDPLLLQLSF 867 >gi|229154750|ref|ZP_04282865.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 4342] gi|228628698|gb|EEK85410.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 4342] Length = 788 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 89/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPHNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LAAVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + N +D+ ++ N + + ++ +I R Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|99032047|pdb|2DDR|A Chain A, Crystal Structure Of Sphingomyelinase From Bacillus Cereus With Calcium Ion gi|99032048|pdb|2DDR|B Chain B, Crystal Structure Of Sphingomyelinase From Bacillus Cereus With Calcium Ion gi|99032049|pdb|2DDR|C Chain C, Crystal Structure Of Sphingomyelinase From Bacillus Cereus With Calcium Ion gi|99032050|pdb|2DDR|D Chain D, Crystal Structure Of Sphingomyelinase From Bacillus Cereus With Calcium Ion gi|99032051|pdb|2DDS|A Chain A, Crystal Structure Of Sphingomyelinase From Bacillus Cereus With Cobalt Ion gi|99032052|pdb|2DDS|B Chain B, Crystal Structure Of Sphingomyelinase From Bacillus Cereus With Cobalt Ion gi|99032053|pdb|2DDS|C Chain C, Crystal Structure Of Sphingomyelinase From Bacillus Cereus With Cobalt Ion gi|99032054|pdb|2DDS|D Chain D, Crystal Structure Of Sphingomyelinase From Bacillus Cereus With Cobalt Ion gi|99032055|pdb|2DDT|A Chain A, Crystal Structure Of Sphingomyelinase From Bacillus Cereus With Magnesium Ion gi|99032056|pdb|2DDT|B Chain B, Crystal Structure Of Sphingomyelinase From Bacillus Cereus With Magnesium Ion Length = 306 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 102/314 (32%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 2 VSTTQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 55 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 56 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 115 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 116 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 170 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + +I GD N N +KT++ + Sbjct: 171 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGHTA 230 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 231 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 290 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 291 NDYSDHYPVEATIS 304 >gi|323463737|gb|ADX75890.1| endonuclease/exonuclease/phosphatase family protein [Staphylococcus pseudintermedius ED99] Length = 623 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 44/329 (13%), Positives = 88/329 (26%), Gaps = 61/329 (18%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGS 76 K+ + S+N+ S + + L N DIV + E+ Sbjct: 302 PSENKLTVASYNLENFS--------NDVKSSSDDKAQKLANGIVNHMKQPDIVGVTEVQD 353 Query: 77 YNAVAKV-----------------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 N K T+ + + + N + +I + Sbjct: 354 NNGPNKGSSDASASYKRLIQAIKDAGGPTYR-YVNIDPENNVDGGQPDANIRVGFLYNPE 412 Query: 120 NVRVLQQ------------------SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 V P + R+++ + G+++ + Sbjct: 413 RVTFNDHIPAGDATTSVAYENNQLTRNPGRITPQDPAFEDVRKSLAAQFDFKGQQVIAIA 472 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKI 215 H KS D L ++ P Q + I Q++ + GD+N Sbjct: 473 NHWKSKRGDDGLFGSHQPVRLTSEPQRVEIAHRIGEFTAQVQQQNPNAAIISVGDYNDFQ 532 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 KT + + ++ + N +D+ ++ ++ + + Sbjct: 533 WSKP-----LKTFESYGLTNKVNDVPKNKRYSYVYQGNTQTLDHILVSEHLKRQTKLDMI 587 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D R SDH PI DF Sbjct: 588 HV----NSDFTDMAGRASDHDPILAQIDF 612 >gi|47567552|ref|ZP_00238263.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus G9241] gi|47555747|gb|EAL14087.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus G9241] Length = 788 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 89/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 TINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPHNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQS-----YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + + ++ R+ + G+ + V+ HL S + Sbjct: 601 LATVPKLLDKNIVRIGDENPLFESTRKPLAAEFTFQGQNVVVVANHLNSKLGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEEKRIQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + N +D+ ++ N + + ++ +I R Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|229028860|ref|ZP_04184961.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271] gi|228732431|gb|EEL83312.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271] Length = 788 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 88/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPHNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LAAVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N K ++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKALEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + N +D+ ++ N + + ++ +I R Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|229143782|ref|ZP_04272202.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24] gi|228639657|gb|EEK96067.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24] Length = 788 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ I V+ HL S + Sbjct: 601 LAPVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDSVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|229171829|ref|ZP_04299400.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3] gi|228611649|gb|EEK68900.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3] Length = 788 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 87/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 TINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LAAVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ QKK + P V+ GD N K ++ Sbjct: 661 QPLVLKSEEKRIQLAQEVNQFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKILEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + N +D+ ++ N + + ++ +I R Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|284992104|ref|YP_003410658.1| endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM 43160] gi|284065349|gb|ADB76287.1| Endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM 43160] Length = 322 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 43/326 (13%), Positives = 80/326 (24%), Gaps = 52/326 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 VR+ +WN+ L E ++ + L + D++ +QE+G+ A+A + Sbjct: 2 VRIGTWNLENLFRPEDEDGPRDPAA-YEAKLAALAGVIARIQPDVLAVQEVGNPAALADL 60 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV-LQQSYPLLGAKDSFSRAGN 142 + I R V ++P AG Sbjct: 61 AER-----AGGEWHCTTAGVEPGQRPIRVGYLSRLPLTDVAEITAFPEKLDPIQVDDAGT 115 Query: 143 ------RRAVELLVEINGKKIWVLDIHLKS------FCFLDSLENTYSPSCSLLSQQAQW 190 R A+ V + G I ++ HLKS Sbjct: 116 RLAVMGRAALRARVAVGGTPIDLITCHLKSKLLTFPPGPDGRPRFDTRDEGERARAAVYA 175 Query: 191 LKDW-------------ITQKKESLVPFVIAGDFNRKINY-----------LGNNDDFWK 226 L + + ++ GD N + Sbjct: 176 LSRRAAEAATVRAAATDLLDGQGQDRRLLVLGDLNDVPEAATTQILQGPPGSEIGTGGFA 235 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEI----- 278 D D + + + R + ID+ ++ + Sbjct: 236 QPDRGDGQRLWNLAARIPADQRFSRRYRGRGELIDHILVSHALVHSVADGDVRTDGAGPT 295 Query: 279 -LYNEDDIKSRGKRLSDHCPISIDYD 303 +D + SDH P+ D Sbjct: 296 PSIEDDPSRREDAPGSDHRPVVAQID 321 >gi|225868757|ref|YP_002744705.1| endonuclease/exonuclease/phosphatase family surface anchored protein [Streptococcus equi subsp. zooepidemicus] gi|225702033|emb|CAW99629.1| endonuclease/exonuclease/phosphatase family surface anchored protein [Streptococcus equi subsp. zooepidemicus] Length = 926 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 46/325 (14%), Positives = 89/325 (27%), Gaps = 59/325 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYN 78 K+ + S+NI S + + + + +L+ DI+ L E+ N Sbjct: 554 PSKLSIASYNIENFSANPSSTKD--------EKVRRIAESFIHDLNAPDIIGLIEVQDNN 605 Query: 79 AVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 K T+ + N ++I T + + Sbjct: 606 GPTDDGTTDARQSAQRLIDAIKALGGPTYQ-YVDIAPENNADGGQPGSNIRTGFLYQPER 664 Query: 121 VRVLQQSYPLLGAKDSF-----------------SRAGNRRAVELLVEINGKKIWVLDIH 163 V + + + + + R+++ G K+ V+ H Sbjct: 665 VSLSDKPRGGVNDAVKWVNGELSLSVGRIDPTNPAWKSVRKSLAAEFIFQGHKVVVVANH 724 Query: 164 LKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 L S +SL S A+ L + + V+ GDFN Sbjct: 725 LNSKRGDNSLYGRVQPVTFKSEERRHVLARLLSQFTKEGASQQANIVMLGDFNDYEFTKT 784 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 K I+ + + S + N +D ++ +N + Sbjct: 785 I-----KLIEEGAMANLVSRHELSDRYSYFYRGNNQTLDNMLLSRNLLGHYEFDMVHV-- 837 Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 838 --NSPFMEAHGRASDHDPLLLQLSF 860 >gi|319893216|ref|YP_004150091.1| Endonuclease/Exonuclease/phosphatase family protein [Staphylococcus pseudintermedius HKU10-03] gi|317162912|gb|ADV06455.1| Endonuclease/Exonuclease/phosphatase family protein [Staphylococcus pseudintermedius HKU10-03] Length = 623 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 45/329 (13%), Positives = 89/329 (27%), Gaps = 61/329 (18%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGS 76 K+ + S+N+ S + + L N DIV + E+ Sbjct: 302 PSENKLTVASYNLENFS--------NDVKSSSDDKAQKLANGIVNHMKQPDIVGVTEVQD 353 Query: 77 YNAVAKV-----------------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 N K T+ + + + N + +I + Sbjct: 354 NNGPNKGSSDASASYKRLIQAIKDAGGPTYR-YVNIDPENNVDGGQPDANIRVGFLYNPE 412 Query: 120 NVRVLQQ------------------SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 V P A + R+++ + G+++ + Sbjct: 413 RVTFNDHIPAGDATTSVAYENNQLTRNPGRIAPQDPAFEDVRKSLAAQFDFKGQQVIAIA 472 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKI 215 H KS D L ++ P Q + I Q++ + GD+N Sbjct: 473 NHWKSKRGDDGLFGSHQPVRLTSEPQRVEIAHRIGEFTAQVQQQNPNAAIISVGDYNDFQ 532 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 KT + + ++ + N +D+ ++ ++ + + Sbjct: 533 WSKP-----LKTFESYGLTNKVKDVPKNKRYSYVYQGNTQTLDHILVSEHLKRQTKLDMI 587 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D R SDH PI DF Sbjct: 588 HV----NSDFTDMAGRASDHDPILAQIDF 612 >gi|229177202|ref|ZP_04304590.1| Sphingomyelinase C [Bacillus cereus 172560W] gi|228606262|gb|EEK63695.1| Sphingomyelinase C [Bacillus cereus 172560W] Length = 333 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 100/314 (31%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D++ L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVIILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDHFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + +I GD N +KT++ + Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPQSPQWTVTSWFQKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 NDYSDHYPVEATIS 331 >gi|301311917|ref|ZP_07217839.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] gi|300830019|gb|EFK60667.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] Length = 287 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 96/313 (30%), Gaps = 41/313 (13%) Query: 2 IRKYVLALVFFLVPCTASVA----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 +++ +L L+ L A +K+ ++S+NI + + + W + D+ Sbjct: 1 MKRILLCLMVALFATGCLFAKNNDEKMNVMSYNIRYDNSGDKDNQW-----KFRRDFA-- 53 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 K +AD+ QE+ + + + + Sbjct: 54 ADLVKFHEADVFGAQEVLNNQLNDLLDRLPEYAYVGVGREDGKTKGEYAPIFYRKDRFSV 113 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLEN 175 +K+ K + A R A +++ GKK + L+ HL + Sbjct: 114 EKSGNFWLAEDINAVGKKGWDAACERVATWAILKDKNTGKKFFFLNTHL-----DHMGKV 168 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPN 231 SL+ +QA+ L +P ++ GDFN + + + + Sbjct: 169 ARHEGASLVLEQAKKL--------SENLPIIVTGDFNAVPSDEPIQVLTNPSDPRHLTHS 220 Query: 232 DSLIRFPKEKDSRCNAN--KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 ++ F + + + IDY + N + + Sbjct: 221 RTIAGFTYGPEWTFHDFGKIPYDKREWIDYIFVKGN---------IKVLRHGVLTETLNN 271 Query: 290 KRLSDHCPISIDY 302 SDHCP+ Sbjct: 272 LFPSDHCPVISTL 284 >gi|329964595|ref|ZP_08301649.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] gi|328524995|gb|EGF52047.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] Length = 286 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 40/318 (12%), Positives = 86/318 (27%), Gaps = 50/318 (15%) Query: 2 IRKYVLAL----VFFLVPC---TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54 ++ L + L C A Q + ++++NI + + + WK Sbjct: 1 MKYTTFFLCACSILLLGSCKNQPAQNGQPLEVMTFNIRLDAPSDSANNWKYRK------- 53 Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 + D++ +QE+ + + T Sbjct: 54 DNACKMIAYYQPDLLGMQEVCHNQMEDLKQGLPQYTALGVGRDDGKEAGEYCPVFFKTDR 113 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDS 172 + +P + + NR ++ + NGKK + HL + Sbjct: 114 FTLVEYGNFSLSEHPDTIGIKGWDASYNRVTTWAVLQEKSNGKKFVYFNTHL-----DND 168 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 + L+ + + + VP +I GDFN + + + ++ Sbjct: 169 GKIARKEGVQLILNKIKEIA--------PDVPAIITGDFNCEPDEEP-----LQILEKGG 215 Query: 233 SLIRFPKEKDSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + + ++ IDY + Y Sbjct: 216 MQNTSETAGITYGPSWSFHDFGRIPLDERVLIDYVFVTD---------GAKVNRYRVIQD 266 Query: 286 KSRGKRLSDHCPISIDYD 303 LSDHCP+ ++ Sbjct: 267 APENGFLSDHCPVLVNLT 284 >gi|196047076|ref|ZP_03114294.1| sphingomyelin phosphodiesterase C [Bacillus cereus 03BB108] gi|196022057|gb|EDX60746.1| sphingomyelin phosphodiesterase C [Bacillus cereus 03BB108] Length = 333 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 99/314 (31%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + + GD N K N +KT+ + Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVKKINAENNSDSEYASMFKTLHASIPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 NDYSDHYPVEATIS 331 >gi|153809025|ref|ZP_01961693.1| hypothetical protein BACCAC_03329 [Bacteroides caccae ATCC 43185] gi|149128358|gb|EDM19577.1| hypothetical protein BACCAC_03329 [Bacteroides caccae ATCC 43185] Length = 315 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 38/324 (11%), Positives = 81/324 (25%), Gaps = 35/324 (10%) Query: 1 MIRKYVLALVFFLVP---CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 M + +L + V C + + + S+N+ + + Y ++ Sbjct: 1 MKLRSLLLIALVAVVFCGCHSYQPTSITVASYNLRNANGSDSAKGNG-----WGQRYPVI 55 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + + D DI QE + + S T Sbjct: 56 AKMVQYHDFDIFGTQECFIHQLKDMKEALPGYDYIGVGRDDGKEKGEHSAIFYRTDKFDV 115 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + P + +K + R + L +L + Sbjct: 116 IEKGDFWLSETPDVPSK-GWDAVLPRICSWGHFKCKDTGFEFLFFNLHM---DHIGKKAR 171 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-TIDPNDSLIR 236 S L+ + + L +P ++ GDFN + + K + + Sbjct: 172 VESAYLVQDKMKELGK------GKELPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKCD 225 Query: 237 FPKEKDSRCNANKNLRNK-IPIDYFVMDQNAYKFLIQE---------------SFSEILY 280 F + N ID+ + ++ Sbjct: 226 FRYATNGTFNDFDPDSFTESRIDHVFVSPVFKVKRYGVLTDTYRSIRGNGGKKDATDCPE 285 Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304 D + + SDH P+ ++ F Sbjct: 286 EIDIKAYQARTPSDHFPVKVELVF 309 >gi|114764770|ref|ZP_01443953.1| alkaline phosphatase [Pelagibaca bermudensis HTCC2601] gi|114542819|gb|EAU45841.1| alkaline phosphatase [Roseovarius sp. HTCC2601] Length = 2191 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 37/333 (11%), Positives = 94/333 (28%), Gaps = 52/333 (15%) Query: 14 VPCTASVAQKVRLVSWNINTLSE--QEGVSLWKNSVKRTTSDY-----TLLRQYA--KNL 64 V + ++ + S+N+ L ++ ++ + D + Sbjct: 1609 VSTLTAGEGELLIASYNVLNLDPVIEDEANILPGTYNAVDDDLGDGRFDAIANQIVSNLN 1668 Query: 65 DADIVFLQEMGSYNAVA-------------------KVFPKNTWCIFYSTERLINHSKRD 105 DI+ LQE+ T+ +T + S Sbjct: 1669 TPDIIGLQEIQDNTGAEGTDDVTSASDTLQQLIDSIAAAGGPTYAYIDNTFIADDTSGGI 1728 Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN-RRAVELLVEINGKKIWVLDIHL 164 +I TA + V V++ S + ++D+ + R + +++ V++ H Sbjct: 1729 PGGNIRTAYLYNPERVSVVEGSVRTISSQDAGAAFEGGRLPLVASFAFGDEEVTVVNNHF 1788 Query: 165 KSFCFLDSLENTYSP------------SCSLLSQQAQWLKDWITQKKESL--VPFVIAGD 210 S + + Q+ ++ ++ + V+ GD Sbjct: 1789 SSKSGSAPIMGIDQEFADLQEDPSVNGAVDERQAQSAEVQGFVDELLAEDGAANVVVLGD 1848 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + ++ + + + + N +D+ ++ N Sbjct: 1849 FNEFEFVSP-----LEELEGSGLVNLTNSLPEDERYSYSFQGNSQSLDHILVSNNLGLDA 1903 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + + SDH P+ Sbjct: 1904 EFDAVHV----NSEFAVTDESASDHDPVLAKVS 1932 >gi|206967557|ref|ZP_03228513.1| sphingomyelin phosphodiesterase C [Bacillus cereus AH1134] gi|206736477|gb|EDZ53624.1| sphingomyelin phosphodiesterase C [Bacillus cereus AH1134] Length = 333 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 100/314 (31%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDHFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + +I GD N +KT++ + Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPQSPQWTVTSWFQKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 NDYSDHYPVEATIS 331 >gi|229188882|ref|ZP_04315915.1| Sphingomyelinase C [Bacillus cereus ATCC 10876] gi|228594587|gb|EEK52373.1| Sphingomyelinase C [Bacillus cereus ATCC 10876] Length = 333 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 100/314 (31%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDHFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + +I GD N +KT++ + Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPQSPQWTVTSWFQKYMY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 NDYSDHYPVEATIS 331 >gi|317478482|ref|ZP_07937642.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] gi|316905371|gb|EFV27165.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] Length = 287 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 40/319 (12%), Positives = 86/319 (26%), Gaps = 51/319 (15%) Query: 2 IRKYVLALVFFLVP--------CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD 53 +R L L F + +A Q + ++++N+ + V+ W Sbjct: 1 MRYTTLLLCFCSILLLGSCKSQPSAQNGQPLEVMTFNVRLDIPSDSVNNWNYRKGDA--- 57 Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 + D++ +QE+ + + T Sbjct: 58 ----CRMIAYYSPDLLGMQEVLHNQMEDLKRGLPQYTALGVGRDDGKEAGEYCPIFFRTD 113 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLD 171 + P + + NR ++ + NG+K + HL + Sbjct: 114 RFTLVEYGNFSLSEQPETIGIKGWDASYNRVTTWAILQEKNNGQKFVYFNTHL-----DN 168 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 + L+ + + + +P +I GDFN +T++ Sbjct: 169 DGKTARKEGVQLILDKIKEIA--------PDMPAIITGDFNCTPGEEP-----LQTLEKG 215 Query: 232 DSLIRFPKEKDSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + + ++ +DY + + Y Sbjct: 216 GMENAAKTAAVTYGPSWSFHDFGRLPVEERVLLDYVFVTK---------GAKIDRYRVIQ 266 Query: 285 IKSRGKRLSDHCPISIDYD 303 K LSDHCPI ++ Sbjct: 267 DKPENSYLSDHCPILVELT 285 >gi|218235001|ref|YP_002365840.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus B4264] gi|218162958|gb|ACK62950.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus B4264] Length = 788 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + + G+ I V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAVEFTFQGQNIVVVANHLNSKLGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|228984258|ref|ZP_04144440.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775545|gb|EEM23929.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 788 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 89/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPHNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LAAVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVVANHLNSKLGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + N +D+ ++ N + + ++ +I R Sbjct: 716 NLKNMLNAVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|261408212|ref|YP_003244453.1| endonuclease/exonuclease/phosphatase [Paenibacillus sp. Y412MC10] gi|261284675|gb|ACX66646.1| Endonuclease/exonuclease/phosphatase [Paenibacillus sp. Y412MC10] Length = 494 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 89/311 (28%), Gaps = 42/311 (13%) Query: 1 MIRKYVLALVFFLV----PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 M+ ++ + + ++++S+N+ + + V R Sbjct: 11 MMLTFLTTASLSASGEMGSTAEASSGPLKVMSFNLRYAANDSQPWENRRPVTR------- 63 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 D++ QE V + R +T Sbjct: 64 --NLILEHQPDVIGTQEGLHRQIVDLENDLPGYDRIGVG-REGGSLGEYMAIFYNTDRLT 120 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174 + P + S+ R A + + NGK ++++ HL Sbjct: 121 PLEQSHFWLSDTPQTISSASWGNQIPRMATWVRFQDLRNGKTFYMVNTHLDH-------- 172 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND-S 233 S + A + D + + +P VI GDFN + + + Sbjct: 173 ----QSEVSRQKSAALIVDKMKAF-DPDIPVVITGDFNTLPGSDTYSIFTSNGLSDAHVT 227 Query: 234 LIRFPKEKDSRCNANKNL---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + + K+ + ID+ + Q ++ + + K G+ Sbjct: 228 AKKRTNDDLGTFHNYKDPTGGGSGNRIDWILHGQ---------GWNILHSEIINYKEDGQ 278 Query: 291 RLSDHCPISID 301 SDH P+ ++ Sbjct: 279 YPSDHYPVMME 289 >gi|209547425|ref|YP_002279343.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538669|gb|ACI58603.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 242 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 35/287 (12%), Positives = 80/287 (27%), Gaps = 49/287 (17%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + +RL+++N+++ + D + ADIV LQE+ Sbjct: 2 AEKSIRLLTYNVHSCIGSDR-----------KLDPGRIASVIAEAQADIVALQEVDVLRR 50 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + H + + A+ ++ PL Sbjct: 51 RTGGIDQAHMIASLLEMQAHFHPALSVAEEQY-GDAIITALPTGAVKAGPLPSIG----- 104 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD--WITQ 197 R A+ + + + +K+ V++ HL +Q L + W+ Sbjct: 105 -EQRGAISVEILVGDRKLLVVNTHLGLRG-------------RERMRQMTTLLNAGWLRG 150 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 + +P ++ GDFN + +++ + + Sbjct: 151 TADEPLPTILCGDFNAIPSSAT-YRLAARSLKDAQRA-----GNARPRATFPARYPLMRL 204 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D+ + + + SDH P+ + F Sbjct: 205 DHVFVTDDLIVKQ----------ATVLENRLARVASDHLPLLAEIAF 241 >gi|329847963|ref|ZP_08262991.1| endonuclease/Exonuclease/phosphatase family protein [Asticcacaulis biprosthecum C19] gi|328843026|gb|EGF92595.1| endonuclease/Exonuclease/phosphatase family protein [Asticcacaulis biprosthecum C19] Length = 278 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 90/314 (28%), Gaps = 52/314 (16%) Query: 2 IRKYVLALVFFLVPCTA---SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 ++ Y+ + L C + Q +R++S+NI ++ + L Sbjct: 1 MKIYIPVALLSLTACATLPEAAPQTLRVMSYNIRYANDAD--------RPNWGERREALA 52 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + D DI+ +QE + + + D N T + R+ Sbjct: 53 KQVAFTDPDILGVQEAQPVQVAYLAAQWPGYDHY-------GLGRDDGVNGETTTLFWRR 105 Query: 119 KNVRVLQQSYPLLGAKD-----SFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLD 171 + +S+ + A R L++ ++GK + V + HL Sbjct: 106 DRFETVSKSHQWCSPTPDRPGKGWDAAWPRTITRLVLRDRLSGKVLDVRNTHL------- 158 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 + A+ + + ES ++ GD N + + Sbjct: 159 -----DNEGAVARENCAKQVAGIV---VESGALVIVLGDMNSGPDSAPYRVLTGDALGLK 210 Query: 232 DSLIRFPKEKDSRCNANKNL---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D+ + N ID+ + + Y Sbjct: 211 DARKAATVDFGPPGTFNGFDLSATQGEAIDHIFVPRGLA---------VTRYGVLTDSFS 261 Query: 289 GKRLSDHCPISIDY 302 GK +SDH P+ D Sbjct: 262 GKVISDHFPVVADI 275 >gi|261404204|ref|YP_003240445.1| 5'-Nucleotidase domain-containing protein [Paenibacillus sp. Y412MC10] gi|261280667|gb|ACX62638.1| 5'-Nucleotidase domain protein [Paenibacillus sp. Y412MC10] Length = 2084 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 43/329 (13%), Positives = 87/329 (26%), Gaps = 65/329 (19%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A+++R+ ++NI S + + K+ DI+ L E+ N Sbjct: 824 AEQLRVATYNIENF-------YPGVSSAKINKLAESIVNNIKS--PDIIGLVEVQDNNGE 874 Query: 81 A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 K T+ F E N+ +I ++ Sbjct: 875 QNNGTTAADQSYQTLINAIKAAGGPTY-SFTDIEPENNNDGGAPGANIRVGFLYNADRIQ 933 Query: 123 VLQQS----------------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 + P + + +R+ + E G+K+ V+ Sbjct: 934 LSDSVQGKKGSPTESVAYDAAKDQLTLNPGRIDPQNAAFNASRKPLAAQFEFQGEKVIVI 993 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK------KESLVPFVIAGDFNRK 214 H S P Q + + V+ GD N Sbjct: 994 ANHFNSKSGDQGPFGNTQPPVLSSETQRHQIAAVVNSFVKDVVSANPDANIVVLGDLNDF 1053 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 + + N+ N +D+ ++ +N + + Sbjct: 1054 QFT-----ETANILKGNELDNLIETLPLKEQYTYTYDGNSQVLDHILVSKNL----TRST 1104 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +I++ D + R+SDH P+ D Sbjct: 1105 QVDIVHLNADFPASKGRVSDHDPVVAQID 1133 >gi|218896127|ref|YP_002444538.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus G9842] gi|218542051|gb|ACK94445.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus G9842] Length = 788 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L +S R+ + G+ + V+ HL S + Sbjct: 601 LAVVPKLLDKNVVRIGDESSLFESTRKPLAAEFTFQGQNVVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ QKK + P V+ GD N K ++ Sbjct: 661 QPLVLKSEDKRIQLAQEVNQFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKALEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + N +D+ ++ N + + ++ +I R Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|163938601|ref|YP_001643485.1| sphingomyelin phosphodiesterase [Bacillus weihenstephanensis KBAB4] gi|163860798|gb|ABY41857.1| Sphingomyelin phosphodiesterase [Bacillus weihenstephanensis KBAB4] Length = 333 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 101/313 (32%), Gaps = 37/313 (11%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 30 STNQNDTLKVMTHNVYMLSTN----LYPNWGQNERADLIGAADYIK--NQDVVILNEVFD 83 Query: 77 YNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 +A ++ T E S+ +A+ K V + Sbjct: 84 NSASNRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKIQ 143 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 Y + N+ V V+ N + + V+ HL++ DS+ SP+ S+ ++Q Sbjct: 144 Y-VFEKGCGPDNLSNKGFVYTKVKKNDRFVHVIGTHLQA---EDSMCGNTSPA-SVRTKQ 198 Query: 188 AQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKEK 241 Q ++++I + + +I GD N N +KT+ + Sbjct: 199 LQEIQEFIKNKNIPNNEYVLIGGDMNVNKINAENNSNSEYASMFKTLHASVPSYTGHTAT 258 Query: 242 DSRC-----NANKNLRNKIPIDYFVMDQNAY--KFLIQESFSEILYNEDDIKSRGKR--- 291 N +DY + ++ F+ K Sbjct: 259 WDATTNSIAKYNYPDAPAEHLDYIIASKDHANPSFVENNVLQVKSPKWSVTSWFKKYTYD 318 Query: 292 -LSDHCPISIDYD 303 SDH P+ Sbjct: 319 DYSDHYPVEATIS 331 >gi|229042920|ref|ZP_04190653.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676] gi|228726385|gb|EEL77609.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676] Length = 788 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ I V+ HL S + Sbjct: 601 LAPVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|229108638|ref|ZP_04238249.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15] gi|228674779|gb|EEL30012.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15] Length = 788 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ I V+ HL S + Sbjct: 601 LAPVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|229126482|ref|ZP_04255496.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4] gi|228656871|gb|EEL12695.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4] Length = 788 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ I V+ HL S + Sbjct: 601 LAPVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|165872719|ref|ZP_02217348.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0488] gi|167635172|ref|ZP_02393488.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0442] gi|167640897|ref|ZP_02399155.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0193] gi|170689667|ref|ZP_02880846.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0465] gi|170709382|ref|ZP_02899794.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0389] gi|177652826|ref|ZP_02935199.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0174] gi|190568515|ref|ZP_03021421.1| sphingomyelin phosphodiesterase C [Bacillus anthracis Tsiankovskii-I] gi|196035669|ref|ZP_03103072.1| sphingomyelin phosphodiesterase C [Bacillus cereus W] gi|227816451|ref|YP_002816460.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. CDC 684] gi|228932107|ref|ZP_04094998.1| Sphingomyelinase C [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229120326|ref|ZP_04249576.1| Sphingomyelinase C [Bacillus cereus 95/8201] gi|229600728|ref|YP_002865273.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0248] gi|254684245|ref|ZP_05148105.1| sphingomyelinase C [Bacillus anthracis str. CNEVA-9066] gi|254725906|ref|ZP_05187688.1| sphingomyelinase C [Bacillus anthracis str. A1055] gi|254734392|ref|ZP_05192105.1| sphingomyelinase C [Bacillus anthracis str. Western North America USA6153] gi|254742078|ref|ZP_05199765.1| sphingomyelinase C [Bacillus anthracis str. Kruger B] gi|254754935|ref|ZP_05206969.1| sphingomyelinase C [Bacillus anthracis str. Vollum] gi|254762334|ref|ZP_05214178.1| sphingomyelinase C [Bacillus anthracis str. Australia 94] gi|301052327|ref|YP_003790538.1| sphingomyelinase [Bacillus anthracis CI] gi|164711580|gb|EDR17128.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0488] gi|167511117|gb|EDR86505.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0193] gi|167529431|gb|EDR92182.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0442] gi|170125703|gb|EDS94618.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0389] gi|170666368|gb|EDT17152.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0465] gi|172081860|gb|EDT66929.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0174] gi|190560309|gb|EDV14288.1| sphingomyelin phosphodiesterase C [Bacillus anthracis Tsiankovskii-I] gi|195991636|gb|EDX55601.1| sphingomyelin phosphodiesterase C [Bacillus cereus W] gi|227005668|gb|ACP15411.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. CDC 684] gi|228663136|gb|EEL18726.1| Sphingomyelinase C [Bacillus cereus 95/8201] gi|228827535|gb|EEM73278.1| Sphingomyelinase C [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229265136|gb|ACQ46773.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0248] gi|300374496|gb|ADK03400.1| sphingomyelinase [Bacillus cereus biovar anthracis str. CI] Length = 333 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 98/314 (31%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + + GD N N +KT+ + Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 NDYSDHYPVEATIS 331 >gi|30019227|ref|NP_830858.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus ATCC 14579] gi|29894770|gb|AAP08059.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus cereus ATCC 14579] Length = 738 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 439 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 490 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 491 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 550 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ I V+ HL S + Sbjct: 551 LAPVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 610 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ QKK + P V+ GD N KT++ Sbjct: 611 QPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 665 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 666 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 721 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 722 VSDHDPVLAQID 733 >gi|327441388|dbj|BAK17753.1| predicted extracellular nuclease [Solibacillus silvestris StLB046] Length = 1177 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 94/328 (28%), Gaps = 60/328 (18%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMG 75 VA K+ L S+NI S + + + + N DI+ L E+ Sbjct: 746 EPVADKLNLASYNIENFSNNKDNT--------SDEKAAKIASTFVNNMKSPDIITLVEVQ 797 Query: 76 SYNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + KV + + N S +I Sbjct: 798 DNDGQTDSGNADASESYLRLINAIKVAGGPQYDW-IDVMPINNTSGGAPGGNIRVGYLYN 856 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAG----------------NRRAVELLVEINGKKIWVLD 161 + V ++ ++++ G R+ + E +++ V+ Sbjct: 857 PERVSLVDGINGTGKQANAWTEKGSLALNPGFVNPSKFEDTRKPIAAEFEFQEERVVVIG 916 Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKESLVPF--VIAGDFNRKI 215 HL S DSL + P S + AQ + D+I + V+AGD N Sbjct: 917 AHLNSKGGDDSLWSPTQPPVLGSEPERIELAQVINDFIDEGLAKDPDVNIVVAGDMNDF- 975 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 +T+ K + N +D+ ++ N + + Sbjct: 976 ----EFTPALETLKGGVLTNMVDKAPVEDRFSYYFQGNNQVLDHILVSNNLAEVTEIDMI 1031 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 + R SDH P+ + D Sbjct: 1032 HI----NANFTEAQGRASDHDPVLVQID 1055 >gi|228919906|ref|ZP_04083261.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839722|gb|EEM85008.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 788 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ I V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|315644659|ref|ZP_07897790.1| 5'-Nucleotidase domain protein [Paenibacillus vortex V453] gi|315279918|gb|EFU43217.1| 5'-Nucleotidase domain protein [Paenibacillus vortex V453] Length = 2086 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 45/331 (13%), Positives = 91/331 (27%), Gaps = 69/331 (20%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYN 78 A+++R+ ++NI G S L + + DI+ L E+ N Sbjct: 825 AEQLRVATYNIENFYPGVGS-----------SKINKLAESIVSSIKSPDIIGLVEVQDNN 873 Query: 79 AVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 K T+ F + + N+ +I Sbjct: 874 GEQNNGTTAADLSYDALIKAIKAAGGPTY-SFTDIDPVNNNDGGAPGANIRVGFLYNPDR 932 Query: 121 VRVLQQSY----------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 V++ P + + +R+ + E G+K+ Sbjct: 933 VQLSDSVNNKKGSSTDSVAYDAAKDQLTYNPGRIDPQNPAFNASRKPLAAQFEFRGEKVI 992 Query: 159 VLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFN 212 V+ H S P S + Q A + ++ V+ GD N Sbjct: 993 VIANHFNSKSGDQGPFGNTQPPVLSSEAQRHQIAAVVNGFVKSVVTANPDANVVVLGDLN 1052 Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 + N+ N +D+ ++ +N + Sbjct: 1053 DFQFT-----QTATILKGNELDNLIDTLPLKEQYTYTYDGNSQVLDHILVSKNL----TR 1103 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ++++ D + R+SDH P+ D Sbjct: 1104 STQVDVVHLNADFPASKGRVSDHDPVVAQID 1134 >gi|120436892|ref|YP_862578.1| endonuclease/exonuclease/phosphatase family protein [Gramella forsetii KT0803] gi|117579042|emb|CAL67511.1| endonuclease/exonuclease/phosphatase family protein [Gramella forsetii KT0803] Length = 276 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 96/309 (31%), Gaps = 41/309 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K++L L F + T Q++ ++++NI +E +G + W + + Sbjct: 1 MKKFLLILSFLFI-TTGVTCQEIEVMTYNIKYANENDGENSW-------SQRKEWITDQI 52 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + + D++ +QE + + + +++ + + +AI + Sbjct: 53 QFYEPDVLGVQEAVKSQ-------LDFFTENINNYKVLGVGREGEDKGEFSAILYKSDKF 105 Query: 122 RVLQQSYPLLGAKDS-----FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 VL+ + L + NR L + + + + D Sbjct: 106 DVLKSNTFWLSETPEKISKGWDADYNRICTYALFQEKESEKKIWVFNTHFDHVGD----- 160 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + ++ + I + +P + GDFN + G + ++ + Sbjct: 161 -----KARLESSKLIIQKIKELNREALPVFLMGDFNLEQESEGI-RLISEFMEKSKEKAD 214 Query: 237 FPKEKDSRCNAN-KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 F + N IDY Y K SDH Sbjct: 215 FKFGPEGTFNGYNFTEAVTRRIDYIF---------TNNQVHIKKYAVLSDSKNLKYPSDH 265 Query: 296 CPISIDYDF 304 P+ I DF Sbjct: 266 FPVLIIADF 274 >gi|228906812|ref|ZP_04070681.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 200] gi|228852816|gb|EEM97601.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 200] Length = 788 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ I V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|228925864|ref|ZP_04088948.1| Sphingomyelinase C [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228833879|gb|EEM79432.1| Sphingomyelinase C [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 333 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 98/314 (31%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + + GD N N +KT+ + Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 NDYSDHYPVEATIS 331 >gi|228957450|ref|ZP_04119204.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802204|gb|EEM49067.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 788 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ I V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|229068731|ref|ZP_04202028.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185] gi|228714348|gb|EEL66226.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185] Length = 788 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ I V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|229078378|ref|ZP_04210941.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2] gi|228704919|gb|EEL57342.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2] Length = 788 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ I V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|229149383|ref|ZP_04277619.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550] gi|228634025|gb|EEK90618.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550] Length = 788 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ I V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|229165616|ref|ZP_04293389.1| Sphingomyelinase C [Bacillus cereus AH621] gi|228617851|gb|EEK74903.1| Sphingomyelinase C [Bacillus cereus AH621] Length = 333 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 100/314 (31%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTNQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSK---------RDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T L S S+ +A+ K V + Sbjct: 83 DNSASNRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ + + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKDDRFVHVIGTHLQA---EDSMCGKNSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + + GD N N +KT+ + Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNRINAENNSDSEYASMFKTLHASIPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAY--KFLIQESFSEILYNEDDIKSRGKR-- 291 N +DY + ++ F+ K Sbjct: 258 TWDATTNSIAKYNYPDAPAEHLDYIIASKDHANPSFVENNVLQVKSPKWSVTSWFKKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 DDYSDHYPVEATIS 331 >gi|284992406|ref|YP_003410960.1| endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM 43160] gi|284065651|gb|ADB76589.1| Endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM 43160] Length = 278 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 76/301 (25%), Gaps = 45/301 (14%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---G 75 + A +R+++WN+ T + D+ LQE+ Sbjct: 2 ADADGLRVLTWNLWW------------RFGAWQDRQTAIEAELAAARPDVCALQEVWIGP 49 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + +R + I A AV + + L Sbjct: 50 EGDQAELLAGRLGMHAVVAPSPAPGRWQRRLGDPAIGFANAVLSRWPITRSAVHELPAHP 109 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R + + G + V L S + Q + + + Sbjct: 110 GEDGE---RTVLHAEIAAPGGTVDVFTTQLDSAP----------DRSATRCAQVEEVVRF 156 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFW---KTIDPNDSLIRFPKEKDSRCNANKNL 251 + + + P V+ GD N + + + P L+ + Sbjct: 157 VAARAGTAHPPVVTGDLNAEPDSDEIRRLCGHKTAPVVPGTVLVDAWRYAGPDEAGWTWD 216 Query: 252 R----------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 R IDY ++ + D G SDHC + + Sbjct: 217 RRNPHVAATFEPSARIDYVLVGPPTAG---GRGHVRGVRLVGDRPVDGVWPSDHCGVLAE 273 Query: 302 Y 302 Sbjct: 274 L 274 >gi|116249399|ref|YP_765240.1| hypothetical protein pRL120737 [Rhizobium leguminosarum bv. viciae 3841] gi|115254049|emb|CAK12446.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 242 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 34/285 (11%), Positives = 83/285 (29%), Gaps = 49/285 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + ++L+++N+++ + D + +ADIV LQE+ Sbjct: 4 KSIKLLTYNVHSCIGGDR-----------KLDPGRIASVIAEAEADIVALQEVDVLRRRT 52 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + H + + A+ ++ PL Sbjct: 53 GGVDQAHAIASLLKMQAHFHPALSIAEEQY-GDAIITSLPTGAVKAGPLPSIG------E 105 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD--WITQKK 199 R A+ + + + +K+ V++ HL +Q L + W+ Sbjct: 106 QRGAISVEILVGNRKLLVVNTHLGLRG-------------RERIRQMTTLLNPGWLRGTA 152 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 + +P ++ GDFN + +++ + + + +D+ Sbjct: 153 DEPLPTILCGDFNAIPSSAT-YRLAARSLKDVQLA-----GGAAPRATFPSRYPLMRLDH 206 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + SDH P+ + F Sbjct: 207 IFVTDDLIVKKAAV----------LENRLTRIASDHLPLLAEIGF 241 >gi|332186411|ref|ZP_08388155.1| endonuclease/Exonuclease/phosphatase family protein [Sphingomonas sp. S17] gi|332013394|gb|EGI55455.1| endonuclease/Exonuclease/phosphatase family protein [Sphingomonas sp. S17] Length = 276 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 38/289 (13%), Positives = 78/289 (26%), Gaps = 29/289 (10%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 ++A+ ++++++N+ S++ +R + ++ + + D++ QE+ Sbjct: 11 PVGAMAETLKVMTFNVRYASDEG--------AERWAARRPVMVELIRRAVPDVIGTQELL 62 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 V + F +R+ H P + Sbjct: 63 QRQGDDIVRALPGYRWF-GRDRMGGHDDEHMGIFYRPDRLTLVDQGDFWLSDTPEVVGSQ 121 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 S+ R A + E K D + +L+ + L Sbjct: 122 SWGTDLPRMASWAVFETKDAKPRRFLFVDTHLAHRDEDAEARDKAAALILARLPTLAK-- 179 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 +P ++AGD N + + D R +E + Sbjct: 180 ------GLPVILAGDMNARPDTAAYRRFAGALTDCWLGAKR--REGPEMTFHDFTGTPDR 231 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY + F D SDH P+ F Sbjct: 232 RIDYLFLRG----------FRADAIATDTWHRGKTYPSDHFPVRATLSF 270 >gi|324325200|gb|ADY20460.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 788 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 84/312 (26%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPHNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LAAVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ ++ P V+ GD N K ++ Sbjct: 661 QPLVLKSEEKRIQLAQEVNQFVQDIQKKNTNAPVVVLGDMNDFEFAKP-----LKALEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|228938309|ref|ZP_04100922.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971187|ref|ZP_04131818.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977796|ref|ZP_04138180.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407] gi|228781906|gb|EEM30100.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407] gi|228788514|gb|EEM36462.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821346|gb|EEM67358.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938818|gb|AEA14714.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 788 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 86/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ I V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ Q+K + P V+ GD N K ++ Sbjct: 661 QPLVLKSEDKRIQLAQEVNHFVQGIQEKNTNAPVVVLGDMNDFEFSKP-----LKALEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|91787699|ref|YP_548651.1| exodeoxyribonuclease III [Polaromonas sp. JS666] gi|91696924|gb|ABE43753.1| Exodeoxyribonuclease III [Polaromonas sp. JS666] Length = 267 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 86/307 (28%), Gaps = 68/307 (22%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + +++ +WN+N+L+ + + D++ LQE+ + Sbjct: 5 TKTMKIATWNVNSLA----------------VRLPQVLDWLAANPVDVLCLQELKLSDD- 47 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + +A+ + F+ Sbjct: 48 ---------KFPLQALADAGYQSAVFGQKTYNGVAILSRTPARNIVKNIA-----GFTDE 93 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +R + ++ ++ V++ + + + + Y + L+ W+ ++ Sbjct: 94 QSR-VIAATLDTPSGEVRVVNGYFVNGQAPGTEKFEYK------MRWLDGLRAWLREELA 146 Query: 201 SLVPFVIAGDFNRKINYLGNNDD--FWKTIDPNDS------------LIRFPKEKDSRCN 246 V+ GDFN + D +TI L + + Sbjct: 147 EHSRLVLVGDFNITADDRDTYDAQGLHETIHHTADERQHLQALLGLGLHDAFRLFEQPEK 206 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDY ++ + D + + +R SDH P Sbjct: 207 TYSWWDYREFAFRRNRGLRIDYILVSNALKPAVKSCLI-------DKLPRKNERPSDHAP 259 Query: 298 ISIDYDF 304 + + D+ Sbjct: 260 VVAELDW 266 >gi|86146808|ref|ZP_01065128.1| putative phospholipase C precursor [Vibrio sp. MED222] gi|85835458|gb|EAQ53596.1| putative phospholipase C precursor [Vibrio sp. MED222] Length = 444 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 45/296 (15%), Positives = 91/296 (30%), Gaps = 36/296 (12%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 A ++++++NI L Y L+ QY K D++ LQE+ + Sbjct: 174 PEPDANTLKVMTYNIWALPAIASHIGD---------RYDLIPQYVKGY--DVLALQEVFA 222 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + + + + I I R V Q +P D Sbjct: 223 NGRDEFLRELSKEYPYQTKMLDKDGINIYDGGVI---IVSRYPIVNEAQYVFPDCTGTDC 279 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 F+ + NG+ V H SF + + +Q + L + Sbjct: 280 FADK---GVNYAEIIKNGQAYHVFGTHTASFDTDTARDYRQRQ-----FKQMRQLAQSLE 331 Query: 197 QKKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---- 251 + + +GDFN + + + + + ++ + S + N Sbjct: 332 --IPTSETVIYSGDFNVNKLKFPDDYQQMFANLQADEPT--YSGYTASTFDPRINNFAGE 387 Query: 252 -----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +DY V+ + + ++ + + LSDH P+S Sbjct: 388 PMSGGENVEYLDYVVVSSEYAQKTHNNNRVDVPRSTSSELWKHYNLSDHFPVSAVI 443 >gi|228904025|ref|ZP_04068131.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 4222] gi|228855621|gb|EEN00175.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 4222] Length = 792 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 493 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 544 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 545 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 604 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L +S R+ + G+ + V+ HL S + Sbjct: 605 LAAVPKLLDKNVVRIGDESSLFESTRKPLAAEFTFQGQNVVVVANHLNSKIGDATPFGKV 664 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ QKK + P V+ GD N K ++ Sbjct: 665 QPLVLKSEDKRIQLAQEVNQFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKALEGT 719 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + N +D+ ++ N + + ++ +I R Sbjct: 720 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 775 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 776 VSDHDPVLAQID 787 >gi|75759359|ref|ZP_00739455.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74493126|gb|EAO56246.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 788 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L +S R+ + G+ + V+ HL S + Sbjct: 601 LAAVPKLLDKNVVRIGDESSLFESTRKPLAAEFTFQGQNVVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ QKK + P V+ GD N K ++ Sbjct: 661 QPLVLKSEDKRIQLAQEVNQFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKALEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + N +D+ ++ N + + ++ +I R Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|85711283|ref|ZP_01042342.1| Extracellular nuclease [Idiomarina baltica OS145] gi|85694784|gb|EAQ32723.1| Extracellular nuclease [Idiomarina baltica OS145] Length = 577 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 101/309 (32%), Gaps = 42/309 (13%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKR------TTSDYTLLRQYAKNLDADIVFLQEMGSY 77 +R+ S+N+ L +G + + + ++DAD+ L E+ + Sbjct: 283 LRISSFNVLNLFNGDGDKNGFPTERGAKSFDAYQRQQAKIVSALVDIDADVFGLMEVEND 342 Query: 78 -----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 +A+ ++ + ++R ++ I + + V+ + ++ + Sbjct: 343 GYGSDSAIVQLVNQLNEAQDSPYVIAEPRAQRLGDDQIAVGLIYNRNRVKPIGHAHTITQ 402 Query: 133 AKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQ-- 187 R+G+R + ++E +G++ V+ H KS D+ N Q Sbjct: 403 GPF---RSGSRPPLAQVLEDKQSGQQFTVIVNHFKSKGGCPDNGPNANQNDGQYCWNQQR 459 Query: 188 ---AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A L +W+ Q V+ GDFN F + Sbjct: 460 LDSAAALIEWVKQNAFPAP--VLLGDFNAYYKEDPVQYIAN---------HGFSNVSRAD 508 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG---------KRLSDH 295 + +D+ +DQ + +E + S R SDH Sbjct: 509 EYSYVFDSQAGALDHVFIDQGLTDSVKNVQHIHYNSDEPTVFSYQDTEYFKVGPYRSSDH 568 Query: 296 CPISIDYDF 304 P+ ID +F Sbjct: 569 DPVFIDVEF 577 >gi|229195383|ref|ZP_04322152.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293] gi|228588082|gb|EEK46131.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293] Length = 788 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 89/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + N +D+ ++ N + + ++ +I R Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|91793624|ref|YP_563275.1| endonuclease/exonuclease/phosphatase [Shewanella denitrificans OS217] gi|91715626|gb|ABE55552.1| Endonuclease/exonuclease/phosphatase [Shewanella denitrificans OS217] Length = 942 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 97/331 (29%), Gaps = 51/331 (15%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWK------NSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 +V +++ S+N+ +G+ +S + + +DAD+ L Sbjct: 453 AVDADMKVASFNVLNYFNGDGIGGGFPTDRGADSASEFARQKAKIVSAMQAIDADVYGLM 512 Query: 73 EMGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVRVLQQ 126 E+ + +A+A + I + I D I + R V Sbjct: 513 EIENDGFGSNSAIADLVNGLNSAIGEPRYQYIALDGPGIGTDAITVGMVYRGDKVTPEGA 572 Query: 127 SYPLLGAKDS--------FSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCF-----LD 171 + L A F+ NR + + +G++ V HLKS D Sbjct: 573 AQVLTSANSPLDDNGQVLFNDTKNRPMLTQNFVHQASGEQFVVAVNHLKSKGSSCDALGD 632 Query: 172 SLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 N +C+ ++ A + W+ ++ GD N ++ Sbjct: 633 PDLNDGQANCNVTRTRAATAVAQWLNTVYPEQQ-VLVIGDLNAYAKEDPI-----TALEQ 686 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG- 289 F S + +D+ + + ++ I +E I Sbjct: 687 GGFSELFQHLGHSNAYSYVFSGESGQLDHALASASLLDNVVAAQEWHINTDEPTILDYNE 746 Query: 290 ----------------KRLSDHCPISIDYDF 304 R SDH P+ + +F Sbjct: 747 EYKSAAQIANLYQGDAYRSSDHDPVIVSLNF 777 >gi|229159752|ref|ZP_04287760.1| Sphingomyelinase C [Bacillus cereus R309803] gi|228623689|gb|EEK80507.1| Sphingomyelinase C [Bacillus cereus R309803] Length = 333 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 99/314 (31%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + DIV L E+ Sbjct: 29 TSTNQNDTLKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDIVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K V + Sbjct: 83 DNSASNRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ + + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKRDDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + V GD N + +K + + Sbjct: 198 QLKEIQDFIKNKNIPNDEYVVFGGDMNVNKINAENDSDSEYASMFKILHASIPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAY--KFLIQESFSEILYNEDDIKSRGKR-- 291 N +DY + ++ F+ + K Sbjct: 258 TWDATTNSIAKYNYPDAPAEHLDYIIASKDHANPSFVENKVLQVKSPKWSVTSWFKKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 DDYSDHYPVEATIS 331 >gi|189096065|pdb|2UYR|X Chain X, Crystal Structure Of Bacillus Cereus Sphingomyelinase Mutant :n57a Length = 306 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 102/314 (32%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 2 ASTTQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 55 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 56 DASASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 115 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 116 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 170 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + +I GD N N +KT++ + Sbjct: 171 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGHTA 230 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 231 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 290 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 291 NDYSDHYPVEATIS 304 >gi|291302648|ref|YP_003513926.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] gi|290571868|gb|ADD44833.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] Length = 278 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 87/307 (28%), Gaps = 59/307 (19%) Query: 12 FLVPCTASVAQ----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 F T + A +R+ ++NI+ + + V D + +LDA Sbjct: 14 FTFTVTPAQAHDRPTTLRVATYNIHAGAGSDNVF-----------DVDRTAEAIASLDAS 62 Query: 68 IVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 ++ LQE+ + ++ IF+ ++ + + A+ Sbjct: 63 VISLQEVDVHWHSRSQWRDLATELATTLDMHIFFGPIYSLDPTTPGAPRREF-GNAILSS 121 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNR---RAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 V +++ + E+ +++NG + V HL Sbjct: 122 YPIVDAKNHEITRLSTQVPNPVPEPMPGFPEVEIDVNGTPVHVYSTHL-----------D 170 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 Y P ++ Q ++ + + P ++ GDFN W+ + + Sbjct: 171 YRPDPAVRQAQVADMRRIMRC--DHGEPQLLLGDFNAPP-EAPELRPLWRKLSD----VW 223 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + IDY + + SDH Sbjct: 224 AKSGQPDPGYTYPASAPDRRIDYIAASKRFKVKSAA--------------TPTTLASDHL 269 Query: 297 PISIDYD 303 P+ + Sbjct: 270 PVVAELT 276 >gi|229131623|ref|ZP_04260505.1| Sphingomyelinase C [Bacillus cereus BDRD-ST196] gi|228651849|gb|EEL07804.1| Sphingomyelinase C [Bacillus cereus BDRD-ST196] Length = 333 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 105/313 (33%), Gaps = 37/313 (11%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 30 STNQNDTLKVMTHNVYMLSTN----LYPNWGQNERADLIGAADYIK--NQDVVILNEVFD 83 Query: 77 YNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 +A ++ T E S+ +A+ K V + Sbjct: 84 NSASNRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKIQ 143 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 Y + N+ V V+ N + + V+ HL++ D++ SP+ S+ ++Q Sbjct: 144 Y-VFEKGCGPDNLSNKGFVYTKVKKNDRFVHVIGTHLQA---EDNMCGQTSPA-SVRTKQ 198 Query: 188 AQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKEK 241 Q ++++I + + +I GD N N +KT+ + Sbjct: 199 LQEIQEFIKNKNIPNNEYVLIGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTAT 258 Query: 242 DSRC-----NANKNLRNKIPIDYFVMDQNAY-----KFLIQESFSEILYNEDDIKSRGKR 291 N +DY + ++ + + +S S +K Sbjct: 259 WDATTNSIAKYNFPDSPAEYLDYIITSKDHANPSYIENKVLQSKSPQWTVTSWLKEYTYN 318 Query: 292 -LSDHCPISIDYD 303 SDH P+ Sbjct: 319 DYSDHYPVEATIS 331 >gi|30260828|ref|NP_843205.1| sphingomyelinase C [Bacillus anthracis str. Ames] gi|47777842|ref|YP_017307.2| sphingomyelinase C [Bacillus anthracis str. 'Ames Ancestor'] gi|228913366|ref|ZP_04076999.1| Sphingomyelinase C [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228944428|ref|ZP_04106801.1| Sphingomyelinase C [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|30254277|gb|AAP24691.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. Ames] gi|47551547|gb|AAT29782.2| sphingomyelin phosphodiesterase C [Bacillus anthracis str. 'Ames Ancestor'] gi|228815330|gb|EEM61578.1| Sphingomyelinase C [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228846275|gb|EEM91294.1| Sphingomyelinase C [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 338 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 98/314 (31%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 34 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 87 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S +A+ K V + Sbjct: 88 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 147 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 148 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 202 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + + GD N N +KT+ + Sbjct: 203 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 262 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 263 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 322 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 323 NDYSDHYPVEATIS 336 >gi|52144237|ref|YP_082591.1| endonuclease/exonuclease/phosphatase [Bacillus cereus E33L] gi|51977706|gb|AAU19256.1| endonuclease/exonuclease/phosphatase [Bacillus cereus E33L] Length = 788 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 TINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPHNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LTAVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|300087680|ref|YP_003758202.1| endonuclease/exonuclease/phosphatase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527413|gb|ADJ25881.1| Endonuclease/exonuclease/phosphatase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 654 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 43/296 (14%), Positives = 82/296 (27%), Gaps = 55/296 (18%) Query: 11 FFLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 P ++ A +R+ ++N++ G D L Q ++ AD Sbjct: 410 LLAFPTPSATADNGMPLRVATYNLHNGFNAVG-----------KLDLEALAQNIEDSGAD 458 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 +V LQE+ V W ++ A+ + + Sbjct: 459 VVALQEISRGWLVNGRVDMLEWLSRRLDMPY----YFGPSSGPFWGNALLSRYPITSAVN 514 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 PL R + +++++G V+ +HL + Q Sbjct: 515 VPLPSEGLPLE----RSFIAAILQVDGLNFQVIAVHLHHVEGDSD----------IRVAQ 560 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 L D+ + + VI GDFN + N K + + Sbjct: 561 VSALLDFYNRSSRT----VIMGDFNAEPNDQEI-----KLMRAAGLRDIMLSLEPPPAYT 611 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ IDY + + + I SDH + D + Sbjct: 612 FRSDDLFQRIDYIWVSPDL----VWSEVRLITGT----------ASDHRGVVADIE 653 >gi|229160143|ref|ZP_04288144.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803] gi|228623354|gb|EEK80179.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803] Length = 788 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 87/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LAAVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ QKK + P V+ GD N K ++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNHFVQGIQKKNANAPVVVLGDMNDFEFAKP-----LKALEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + N +D+ ++ N + + ++ +I R Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|330821279|ref|YP_004350141.1| endonuclease/exonuclease/phosphatase [Burkholderia gladioli BSR3] gi|327373274|gb|AEA64629.1| endonuclease/exonuclease/phosphatase [Burkholderia gladioli BSR3] Length = 645 Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 40/319 (12%), Positives = 86/319 (26%), Gaps = 47/319 (14%) Query: 20 VAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 +R+ S+N+ N + + R + L AD++ L Sbjct: 287 AQADLRVASFNVLNYFNGDGKGGGFDAPDNRGAPTYKEFQRQEAKIVNAITALQADVIGL 346 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR-DSNNDIHTAIAVRKKNVRVLQQSYPL 130 E+ + + R+++ + I A+ ++V P+ Sbjct: 347 MEIANNGYGELSAVRQLAARLGDGWRVVDPGSEKLGGDAIKVALLYNSRSVE------PI 400 Query: 131 LGAKDSFSRAGNRRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSP------SCS 182 A NR+ + G + + V+ HLKS D+ Sbjct: 401 GKAATLAIDNKNRQPLAQTFRRIGGARAVTVVVNHLKSKGCTDASGGDADQGDGQSCWNP 460 Query: 183 LLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + A + DW+ + ++ GD N + + + Sbjct: 461 TRVRAAGLVADWLAGNPTGVNGAGVLLIGDMNSYAKEDPI-----ALFEARGYVNLAARF 515 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR------------ 288 + + +D+ + + + I +E + Sbjct: 516 IGAGAYSYVFGGETGYLDHALASASLLPRVKAVHEWHINADEPVVLQYTLAYKSAEQQNS 575 Query: 289 -----GKRLSDHCPISIDY 302 R SDH P+ +D Sbjct: 576 FYAPDAYRSSDHDPVLVDL 594 >gi|301052723|ref|YP_003790934.1| endonuclease/exonuclease/phosphatase [Bacillus anthracis CI] gi|300374892|gb|ADK03796.1| endonuclease/exonuclease/phosphatase [Bacillus cereus biovar anthracis str. CI] Length = 788 Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 89/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 TINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + N +D+ ++ N + + ++ +I R Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|229195000|ref|ZP_04321777.1| Sphingomyelinase C [Bacillus cereus m1293] gi|228588435|gb|EEK46476.1| Sphingomyelinase C [Bacillus cereus m1293] Length = 338 Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 99/314 (31%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 34 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 87 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S +A+ K V + Sbjct: 88 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 147 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 148 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 202 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + + GD N N +KT+ + Sbjct: 203 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 262 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 263 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFVENKVLQPKSPQWTVTSWLKKYTY 322 Query: 292 --LSDHCPISIDYD 303 SDH P++ Sbjct: 323 DDYSDHYPVAATIS 336 >gi|255536406|ref|YP_003096777.1| hypothetical protein FIC_02282 [Flavobacteriaceae bacterium 3519-10] gi|255342602|gb|ACU08715.1| hypothetical protein FIC_02282 [Flavobacteriaceae bacterium 3519-10] Length = 302 Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 90/306 (29%), Gaps = 33/306 (10%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M R L + F + + AQ ++++++NI + + + W+N + Sbjct: 28 MKRLISLIMFVFCLTVS---AQNLKVMTYNIRLALDSDKENSWENRKTDA-------LKL 77 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 D++ +QE + ++ S TA ++ Sbjct: 78 LNYYHPDVLGVQEAVPQQMSDLKNGLAGYNFVGVGRDDGSNKGEYSAIFFDTAKLQVLQS 137 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 P +K + A NR L + + ++ F S Sbjct: 138 GTFWLSETPEKPSK-GWDAAYNRICTFALFKTKKGRRKFWAFNVH---FDHVGNIAREKS 193 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 +L+ + + L +P ++ GDFN + + P Sbjct: 194 AALILSKIKELN-------TKNLPVILTGDFNLTDKTTPM-KILSENLSDTYRNCAQPSY 245 Query: 241 KDSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ++ IDY + K L +S I D + SDH P+ Sbjct: 246 GPTGTFTAFDVNKIPTERIDYIFI-----KHLKCKSHRTIN----DRRENLLYPSDHFPV 296 Query: 299 SIDYDF 304 + F Sbjct: 297 MAELKF 302 >gi|296501782|ref|YP_003663482.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis BMB171] gi|296322834|gb|ADH05762.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis BMB171] Length = 788 Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ I V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEDKRIQLAQEVSHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|42780246|ref|NP_977493.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus ATCC 10987] gi|42736165|gb|AAS40101.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus ATCC 10987] Length = 788 Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 TINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPHNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LAAVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVVANHLNSKLGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|53713044|ref|YP_099036.1| hypothetical protein BF1755 [Bacteroides fragilis YCH46] gi|52215909|dbj|BAD48502.1| conserved hypothetical protein [Bacteroides fragilis YCH46] Length = 287 Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 89/316 (28%), Gaps = 42/316 (13%) Query: 1 MIRKYVLALVFFLVPC-----TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55 M + +L L FF C AS + V ++S+NI + ++ + W+ R Sbjct: 1 MEKIILLVLPFFAASCGLVKQQASAPEPVNVMSFNIRYDNPEDSLDNWRYRKDR------ 54 Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + D DI+ QE+ + + S Sbjct: 55 -VANAIHFYDVDILGTQEVLHNQLEDLKLRLPEYGVVGVGREDGKEKGEYSALWYKKDRF 113 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSL 173 + P + + A R A + + +++ K+ + L+ HL Sbjct: 114 NVLDSGYFWLSETPEVAGSKGWDGACERIASWVKLQDKVSDKEYFALNTHL-----DHVG 168 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTID 229 SL+ + L D +P ++ GDFN ++ + + Sbjct: 169 GMARREGISLMLDRVNELSD--------GLPVIVTGDFNSELESDVIKHVTDSANPEHLT 220 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + + IDY + + Y Sbjct: 221 DARQASSIVYGPSWSFHDFGKIPYNKRPLIDYVFVRNGL---------KVLRYGILAETE 271 Query: 288 RGKRLSDHCPISIDYD 303 LSDH P+ + + Sbjct: 272 NNGFLSDHTPVLVTVE 287 >gi|188575171|ref|YP_001912100.1| endonuclease/exonuclease/phosphatase family [Xanthomonas oryzae pv. oryzae PXO99A] gi|188519623|gb|ACD57568.1| endonuclease/exonuclease/phosphatase family [Xanthomonas oryzae pv. oryzae PXO99A] Length = 319 Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 49/301 (16%), Positives = 97/301 (32%), Gaps = 33/301 (10%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 +LAL L AS +R++S+N+ V + + KR T T + K Sbjct: 48 ILALCITLPAFAASAPAPLRVMSFNVR-------VPMDSDGDKRWTVRRTSMVALIKQAH 100 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 D+ QE+ A + F R + A++V + L Sbjct: 101 PDVFGTQELVPEQAQYLASHLPAYRWFGKGRRADGSDEHMGVFYDSNALSVIESGDFWL- 159 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 P + S++ R L E + ++ ++L+ HL + Sbjct: 160 SETPEVPGSSSWNTDLPRMVTWALFERRNDKRRFYLLNTHLPH----------RDQDEAA 209 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 A+ + I + +P V+ GDFN + + + + Sbjct: 210 REHGARVILSRIAT-LPADIPVVVTGDFNSDPDQGTYR--TLTAVLGDARAHVAKPQGPE 266 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + N + ID+ + + ++ D + G SDH P+ +++ Sbjct: 267 KTFQNFTTQPTRRIDWILFRG----------LTPTRFSTLDARPGGILPSDHYPVLAEFE 316 Query: 304 F 304 + Sbjct: 317 W 317 >gi|229089738|ref|ZP_04220999.1| Sphingomyelinase C [Bacillus cereus Rock3-42] gi|228693637|gb|EEL47339.1| Sphingomyelinase C [Bacillus cereus Rock3-42] Length = 338 Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 98/314 (31%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 34 TSTDQNNTLKVMTHNVYMLSNN----LYPNWGQNERADLIGAADYIK--NQDVVILNEVF 87 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S +A+ K V + Sbjct: 88 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 147 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 148 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 202 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + + GD N N +KT+ + Sbjct: 203 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 262 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 263 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 322 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 323 NDYSDHYPVEATIS 336 >gi|86610191|ref|YP_478953.1| endonuclease/exonuclease/phosphatase family protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558733|gb|ABD03690.1| endonuclease/exonuclease/phosphatase family protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 840 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 46/329 (13%), Positives = 96/329 (29%), Gaps = 50/329 (15%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK--------RTTSDYTLLRQYAKNLDAD 67 SV +R+ S+N+ G + + N+ T L + + +DAD Sbjct: 333 NPPSVGGSLRVASFNLFNYFNTFGNACFPNNSSCQGASNATEFTRQRDKLIEAIRRMDAD 392 Query: 68 IVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNV 121 IV L E+ + +++ + + T +N + + I + V Sbjct: 393 IVGLNELENDGYGSNSSIQDLVNGLNQVMGAGTYAFVNVGVPNLGGDAITNGFIYKPATV 452 Query: 122 RVLQQSYPLLGAKDSFSRAGNRR---AVELLVE--INGKKIWVLDIHLKSFCFLDSLENT 176 + + P F++ R + + N V+ H KS + Sbjct: 453 EIAPGTNPAFLDTGEFTQGPGRFHRPPLAVTFRQRSNNATFTVVVNHFKSKVSPCDPIDN 512 Query: 177 YSPSCS---LLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 + ++ AQ L W+ + +I GD N KT++ Sbjct: 513 DPFQGNCNGNRTRAAQQLLSWLATNPTGSTDPDVLIMGDLNSYAMEDPI-----KTLEAG 567 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-- 289 + + +D+ + + + + + I +E Sbjct: 568 GFINL----NGPNSYSFSFQGQWGSLDHALANSSLRPQVTGSAKWHINADEPVSLDYTLS 623 Query: 290 ---------------KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 624 FKSPSQQSLFYASDPFRSSDHDPVLVGLN 652 >gi|130078|sp|P09599|PHL1_BACCE RecName: Full=Sphingomyelinase C; Short=SMase; AltName: Full=Cereolysin B; AltName: Full=SMPLC; AltName: Full=Sphingomyelin phosphodiesterase; Flags: Precursor gi|580755|emb|CAA45503.1| sphingomyelin phosphodiesterase [Bacillus cereus] gi|580761|emb|CAA31333.1| SMase [Bacillus cereus] Length = 333 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 101/314 (32%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + + GD N N +KT+ + Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P++ Sbjct: 318 DDYSDHYPVAATIS 331 >gi|218902274|ref|YP_002450108.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH820] gi|218539755|gb|ACK92153.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH820] Length = 788 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 89/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ + D Sbjct: 772 VSDHDPVLVQID 783 >gi|228951535|ref|ZP_04113640.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228808100|gb|EEM54614.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 788 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + + G+ I V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAVEFTFQGQNIVVVANHLNSKLGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEDKRIQLAQEVNYFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|297565545|ref|YP_003684517.1| endonuclease/exonuclease/phosphatase [Meiothermus silvanus DSM 9946] gi|296849994|gb|ADH63009.1| Endonuclease/exonuclease/phosphatase [Meiothermus silvanus DSM 9946] Length = 601 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 86/304 (28%), Gaps = 34/304 (11%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--N 78 +R+ S+N+ G N + L + LDADIV L E+ + Sbjct: 304 GGSLRVASYNVLNYFTTLGARGASNQAE-LERQRAKLVAALRALDADIVGLIEIQNNGDA 362 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 A+ + S + + I A+ + + P + Sbjct: 363 ALEDLVRALN-TALGSDAYAALATGSLGTDQIKVALIYKP------ARVRPEGAFRIDDD 415 Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLK 192 +R + G + V+ H KS + +L +QAQ L Sbjct: 416 PIFSRPPLAQTFRDRATGGRFSVVVNHFKSKGCEGASGAETDTGQGCWNALRVRQAQRLL 475 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 +I + + ++ GD N K + ++ + Sbjct: 476 TFINDLRATDPDVLVVGDLNAYAEEDP-----LKVLTGAGLENLILHISAAKRYSYVFNG 530 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------KRLSDHCPIS 299 +D+ + + + + I +E + R SDH P+ Sbjct: 531 ESGNLDHALATSSLSSQVTGITEWHINADEPRVLDYNTEFKPDDRYAPTPFRSSDHDPLL 590 Query: 300 IDYD 303 + + Sbjct: 591 VGLN 594 >gi|34499249|ref|NP_903464.1| hypothetical protein CV_3794 [Chromobacterium violaceum ATCC 12472] gi|34105100|gb|AAQ61456.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 637 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 102/324 (31%), Gaps = 52/324 (16%) Query: 21 AQKVRLVSWNINTLSEQE--GVSLWKNSVKRTTSDY----TLLRQYAKNLDADIVFLQEM 74 A +R+ S+N+ + G +T D+ + + LDAD++ L E+ Sbjct: 296 AGHLRVASFNVLNFFNGDGLGGGFPTERGAKTRDDFLRQKAKIVSAIRQLDADVLGLMEL 355 Query: 75 GS-----YNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQS 127 + +AV ++ + + + I T + R V+ + Sbjct: 356 ENDGFGPQSAVKELVDALNAGQAADKQYRFVDPGLPKIGTDAITTGMLYRPSRVKPDGAA 415 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF----------LDSLENTY 177 L NR ++ +GKK+ ++ HLKS D+ Sbjct: 416 QALTVG----DPGKNRLSLAQTFAADGKKLTLVVNHLKSKGSSCDQVKVDGAPDADTGDG 471 Query: 178 SPSCSLLSQQ-AQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 +C+L Q A+ L W Q+ + ++ GD N + + Sbjct: 472 QGNCNLTRVQAARDLVKWAKQRGASAKEGLLVMGDMNAYAKEDPI-----RAFEDGGLSN 526 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289 + + + +D+ + D + K++ I +E G Sbjct: 527 LLARFQK-DAYSYVYQGESGNLDHALADASLVKWVADAGEWHINADEPTALEYGSEFKSA 585 Query: 290 -----------KRLSDHCPISIDY 302 R SDH P+ +D Sbjct: 586 EQRQNYYAPDAYRSSDHDPLYVDL 609 >gi|329922986|ref|ZP_08278502.1| endonuclease/exonuclease/phosphatase family protein [Paenibacillus sp. HGF5] gi|328941759|gb|EGG38044.1| endonuclease/exonuclease/phosphatase family protein [Paenibacillus sp. HGF5] Length = 494 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 88/311 (28%), Gaps = 42/311 (13%) Query: 1 MIRKYVLALVFFLV----PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 M+ ++ + + ++++S+N+ + + V R Sbjct: 11 MMLTFLTTASLSASGEMGSTAEASSGPLKVMSFNLRYAANDGQPWENRRPVTR------- 63 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 D++ QE V + R +T Sbjct: 64 --NLILEHQPDVIGTQEGLHRQIVDLENDLPGYDRIGVG-REGGSLGEYMAIFYNTERLK 120 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174 + P + S+ R A + + NGK ++++ HL Sbjct: 121 PLEQSHFWLSDTPQTISSASWGNQIPRMATWVRFQDLRNGKTFYMVNTHLDH-------- 172 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND-S 233 S + A + D + + +P VI GDFN + + + Sbjct: 173 ----QSEVSRQKSAALIVDKMKSF-DPEIPVVITGDFNTLPASDTYSIFTNNGLSDAHVT 227 Query: 234 LIRFPKEKDSRCNANKNL---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + + K+ + ID+ + Q ++ + + K + Sbjct: 228 AKKRTNDDLGTFHNYKDPTGGGSGNRIDWILHGQ---------GWNVLHSEIINYKEDDQ 278 Query: 291 RLSDHCPISID 301 SDH P+ ++ Sbjct: 279 YPSDHYPVMME 289 >gi|332297419|ref|YP_004439341.1| Endonuclease/exonuclease/phosphatase [Treponema brennaborense DSM 12168] gi|332180522|gb|AEE16210.1| Endonuclease/exonuclease/phosphatase [Treponema brennaborense DSM 12168] Length = 358 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 60/325 (18%), Positives = 110/325 (33%), Gaps = 33/325 (10%) Query: 4 KYVLALVFFLVPC-TASVAQKVRLVSWNINTLSEQEGVSLWKN---------SVKRTTSD 53 +L LVP T + +R+VSWN+ T + + S+ + T+ Sbjct: 29 SLLLYGCGALVPGETGNSGTDIRVVSWNVQTFFDAQTAGTEYGEFRGPNTAWSLAKYTAR 88 Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 L K LDADI+ LQE+ + + + + F +++ + ++ D Sbjct: 89 LERLCGAIKRLDADILVLQEIENESVLRDIVN------FLASDNTYRYVCFAADGDGAIG 142 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDS 172 V + V + + ++ + R +E+ V + VL I S Sbjct: 143 CGVLSRLPVV-SGTVHQVDSRIHGVQPSLRPLLEITVSNTADVPVCVLLICHWKSKAGGS 201 Query: 173 LENTYSPSCSLL--SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 + + +A L + E+ +P V+ GDFNR I + + + Sbjct: 202 DAAAVWQAAQERLAAIRAAELLYAVLPADENRLPVVLCGDFNRDIGEFTEDGADGRAVCM 261 Query: 231 ND----SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA-YKFLIQESFSEILYNEDDI 285 + S D+ + N ID+F + + ES D Sbjct: 262 DGVSLKSGWLSFSSADTGAGSYFYRNNWEKIDHFFIAGAIDFVDFKAESDGPWSRLSDTG 321 Query: 286 --------KSRGKRLSDHCPISIDY 302 G+ SDH PI+ + Sbjct: 322 VLVPFRYELWNGQGYSDHFPIAATF 346 >gi|222094804|ref|YP_002528864.1| endonuclease/exonuclease/phosphatase [Bacillus cereus Q1] gi|221238862|gb|ACM11572.1| endonuclease/exonuclease/phosphatase [Bacillus cereus Q1] Length = 788 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 89/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + N +D+ ++ N + + L+ +I R Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPLHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|206976594|ref|ZP_03237500.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus H3081.97] gi|206745277|gb|EDZ56678.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus H3081.97] Length = 788 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 89/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + N +D+ ++ N + + L+ +I R Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPLHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|217958656|ref|YP_002337204.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH187] gi|229137866|ref|ZP_04266465.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26] gi|217063925|gb|ACJ78175.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH187] gi|228645523|gb|EEL01756.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26] Length = 788 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 89/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + N +D+ ++ N + + L+ +I R Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPLHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|194363979|ref|YP_002026589.1| endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia R551-3] gi|194346783|gb|ACF49906.1| Endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia R551-3] Length = 481 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 94/326 (28%), Gaps = 36/326 (11%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNS------VKRTTSDYTLLRQ 59 VL L P +V + + ++N+ +G + + L Sbjct: 163 VLKLPELKRPAVPTVPGSLHVAAFNLENFFNGDGQGGGFPTLRGARTPDEHKAQVAKLVT 222 Query: 60 YAKNLDADIVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTA 113 L AD+ L E+ + +A+A++ + + + I Sbjct: 223 TVNALGADVAALMELENDGYGPQSAIAELVDALNRDRGGQGDWRFVDAGSGPGENPIRVG 282 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKS-FCFLD 171 I R ++ + + L G +R + + G V+ H KS C Sbjct: 283 IIYRSTRLQPVGKPATLTGGPFVEH---SRVPLAQAFQGKQGAPFVVVANHFKSKGCRDA 339 Query: 172 SLENTYSPSCS-----LLSQQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDF 224 S + AQ L W+ V+ GDFN Sbjct: 340 SGADADRNDNQGCWNATRVTSAQQLHAWLQTDPTGTGAKDAVLLGDFNAYAMEDPI---- 395 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 +T+ F K + +D+ +++ K L + +E D Sbjct: 396 -RTLHDLGWQDAFKVAKVEHPYSYVYNGYTGRLDHALLNPGMAKRLRGAAEWHSNADEQD 454 Query: 285 IKSRG-------KRLSDHCPISIDYD 303 R SDH P+ + +D Sbjct: 455 ASGYQGRNVQGPWRSSDHDPLLLGFD 480 >gi|226310908|ref|YP_002770802.1| hypothetical protein BBR47_13210 [Brevibacillus brevis NBRC 100599] gi|226093856|dbj|BAH42298.1| hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 1829 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 40/336 (11%), Positives = 86/336 (25%), Gaps = 66/336 (19%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFL 71 V + K+ + S+NI S + + + + + DI+ + Sbjct: 953 VTSISPKEDKLTIASYNIENFSAKTDS-----------AKINRIAETIVDNMKAPDIIGV 1001 Query: 72 QEMGSYNAVAKVFPKN-----------------TWCIFYSTERLINHSKRDSNNDIHTAI 114 EM N + + N +I Sbjct: 1002 VEMQDNNGPTDNGQTDATQSADALIKAMENKNGPTYRYIDIAPQNNQDGGQPGGNIRVGF 1061 Query: 115 AVRKKNVRVLQ---------------------QSYPLLGAKDSFSRAGNRRAVELLVEIN 153 V++ P + + A +R+ + Sbjct: 1062 FYNPGRVQLAAGTPGGATDAVQIETRDGVAHLSHNPGRVDPTNAAFASSRKPLAAEFIFQ 1121 Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK--KESLVPFVI 207 G+ + V+ H S +L P S + A+ L ++ + ++ V+ Sbjct: 1122 GEPVIVIANHFNSKGGDQALFGKDQPPQLVSEVQRMKIARVLNSFVKEIHSAQAKANVVV 1181 Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 GD N + + K N +D ++ + Sbjct: 1182 LGDLNDFPFSNPV-----QELADGVLTNMVEKLPKGEQYTYVYQGNSQVLDQILVSNHLE 1236 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +I++ + R+SDH P+ + D Sbjct: 1237 DDTK----VDIVHINAGLTENEGRVSDHNPVLVQLD 1268 >gi|324324718|gb|ADY19978.1| sphingomyelinase C [Bacillus thuringiensis serovar finitimus YBT-020] Length = 333 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 98/314 (31%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYMK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + + GD N N +KT+ + Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 NDYSDHYPVEATIS 331 >gi|254883467|ref|ZP_05256177.1| metallophosphoesterase [Bacteroides sp. 4_3_47FAA] gi|319641746|ref|ZP_07996428.1| metallophosphoesterase [Bacteroides sp. 3_1_40A] gi|254836260|gb|EET16569.1| metallophosphoesterase [Bacteroides sp. 4_3_47FAA] gi|317386633|gb|EFV67530.1| metallophosphoesterase [Bacteroides sp. 3_1_40A] Length = 251 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 94/304 (30%), Gaps = 66/304 (21%) Query: 2 IRKYVLALVFFL----VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 ++K +L L+F + + +++ +R++S+NI+ +G DY + Sbjct: 5 MKKLILCLLFLIVGVELHASSAHGDSLRIMSYNIHNGIGMDG-----------KVDYARI 53 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 +++ D+V LQE+ S + V + + + + Sbjct: 54 ANVISDVNPDVVALQELDSITHRSPVNVLEEIASVTGMNYVFGPAISYGGGKYGIGVMSK 113 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 +K + V S P R R + + E K L H Sbjct: 114 EKPLNVRNVSLP--------GREEARTLLVVEFE----KYIFLATHFSLTAAD------- 154 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 Q + ++ + + P +AGD N + L + Sbjct: 155 ---------QIKSIEVILKEVFSKEKPVFMAGDMNSVPSSLTQKNI-------RKYFKVL 198 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 ++ CN IDY K + + ED + SDHCP Sbjct: 199 TDDRWITCNG-------ECIDYIY---GYEKKKGKFAVRRKGRIEDHV------ASDHCP 242 Query: 298 ISID 301 + +D Sbjct: 243 VYVD 246 >gi|229177605|ref|ZP_04304982.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W] gi|228605795|gb|EEK63239.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W] Length = 788 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ I V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEDKRIQLAQEVNYFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|206968309|ref|ZP_03229265.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH1134] gi|206737229|gb|EDZ54376.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH1134] Length = 788 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ I V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEDKRIQLAQEVNYFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|229183010|ref|ZP_04310242.1| Sphingomyelinase C [Bacillus cereus BGSC 6E1] gi|228600467|gb|EEK58055.1| Sphingomyelinase C [Bacillus cereus BGSC 6E1] Length = 338 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 99/314 (31%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 34 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 87 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K V + Sbjct: 88 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 147 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 148 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 202 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + + GD N N +KT+ + Sbjct: 203 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 262 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 263 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 322 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 323 DDYSDHYPVEATIS 336 >gi|229101435|ref|ZP_04232178.1| Sphingomyelinase C [Bacillus cereus Rock3-28] gi|228682011|gb|EEL36145.1| Sphingomyelinase C [Bacillus cereus Rock3-28] Length = 333 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 50/314 (15%), Positives = 101/314 (32%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TPTNQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K V + Sbjct: 83 DNSASDRLLGNLKREYPNQTAVLGRSSGNEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + V+ HL++ DS+ SP+ S+ ++ Sbjct: 143 QY-VFEKGCGPDNLSNKGFVYTKIKKNDSFVHVIGTHLQA---EDSMCGKISPA-SVRTK 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q Q ++D+I + + +I GD N N +KT+ + Sbjct: 198 QLQEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSHIENKVLQPKSPQWTVTSWFKKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 NDYSDHYPVEATIS 331 >gi|256839412|ref|ZP_05544921.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256738342|gb|EEU51667.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 306 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 36/324 (11%), Positives = 81/324 (25%), Gaps = 43/324 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K + + +F A+ + + ++N+ + + + Y + Q Sbjct: 1 MKKVIYSFIFLFCAVLTLQAETMVVATYNLRNANGGDSTNGNG-----WGQRYPYIAQIV 55 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + DI QE + + S T K Sbjct: 56 QFHGFDIFGTQEGKYPQLQDLRQAMPGYDYIGVGRDDGKRAGEHSAIFYRTD-----KFE 110 Query: 122 RVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + + L D + R L +L Sbjct: 111 VLEHGDFWLSEITDRPNKGWDAVLPRICTWGEFRDKQTGFTFLFFNLHMDHVG------- 163 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 ++ A+ + + I + +P ++ GDFN I + I Sbjct: 164 ---VQARAESAKLILEKIKEF-PKKLPAILTGDFNVDQTSESYQLLDGSGIMRDSYEIAD 219 Query: 238 PKEKDSRCNANKNLRNK--IPIDYFVMDQNAYKF---LIQESFS-------------EIL 279 + + + K ID+ + + + +++ Sbjct: 220 FRYAPNGTFNGFHPDRKTDSRIDHLFLTKEFEVKKYGFLTDTYRSEAKESARKEQNGNFP 279 Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303 K + SDH P+ I + Sbjct: 280 KEVSLSKYEARTPSDHFPVMIVVE 303 >gi|118476360|ref|YP_893511.1| sphingomyelin phosphodiesterase [Bacillus thuringiensis str. Al Hakam] gi|118415585|gb|ABK84004.1| sphingomyelin phosphodiesterase [Bacillus thuringiensis str. Al Hakam] Length = 378 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 99/314 (31%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 74 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 127 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S +A+ K V + Sbjct: 128 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 187 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 188 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 242 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + + GD N K N +KT+ + Sbjct: 243 QLKEIQDFIKNKNIPNDEYVLFGGDMNVKKINAENNSDSEYASMFKTLHASIPSYTGHTA 302 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 303 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 362 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 363 NDYSDHYPVEATIS 376 >gi|196037227|ref|ZP_03104538.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus NVH0597-99] gi|196031469|gb|EDX70065.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus NVH0597-99] Length = 788 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 89/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + + G+ + V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAVEFTFQGQNLVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|217958262|ref|YP_002336808.1| sphingomyelin phosphodiesterase C [Bacillus cereus AH187] gi|217066797|gb|ACJ81047.1| sphingomyelin phosphodiesterase C [Bacillus cereus AH187] Length = 333 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 103/320 (32%), Gaps = 44/320 (13%) Query: 17 TASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 +++ A +++++ N+ LS L+ N + +D Y K + D+V Sbjct: 23 SSAQADTSTDQNNILKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVV 76 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKN 120 L E+ +A ++ T E S+ +A+ K Sbjct: 77 ILNEVFDNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKW 136 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 V + Y N+ V ++ N + + V+ HL++ DS+ SP+ Sbjct: 137 PIVEKVQYVFANGCGP-DNLSNKGFVYAKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA 192 Query: 181 CSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSL 234 S+ + Q + ++D+I + + + GD N N +KT+ + Sbjct: 193 -SVRTNQLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPS 251 Query: 235 IRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 N +DY + ++ E+ + + Sbjct: 252 YTGHTATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFVENKVLQPKSPQWTVTSW 311 Query: 290 KR------LSDHCPISIDYD 303 + SDH P++ Sbjct: 312 LKKYTYDDYSDHYPVAATIS 331 >gi|197120014|ref|YP_002140441.1| endonuclease/exonuclease/phosphatase family protein [Geobacter bemidjiensis Bem] gi|197089374|gb|ACH40645.1| endonuclease/exonuclease/phosphatase family protein [Geobacter bemidjiensis Bem] Length = 249 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 36/282 (12%), Positives = 83/282 (29%), Gaps = 44/282 (15%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++N++ L + S + + DIV LQE+ + Sbjct: 7 SFTIMTYNVHRLIGNDRHSSAP-----------RIAEVIHTYQPDIVCLQELPGARVRPE 55 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + L + V + L Q+ L ++ + Sbjct: 56 -VGGACQNLVHELALLETGGRHFFLERERWGKVVLSRFPMRLVQAG-GLHPQNRYRTVVP 113 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKKE 200 R + + V++ G+K+ V+++HL + Q + L +W++ + Sbjct: 114 RGVLWVEVDLFGQKLQVVNVHLGLTP-------------QERNSQVKVLTGPEWLS-HPD 159 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 P + GDFN + + +D + L + + D+ Sbjct: 160 CRPPVALCGDFNTLPSSTIHKQLKNALMDEQEKLKF-----GHNHFTFPSKLPMVRFDHI 214 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + SDH P+ + Sbjct: 215 FVSPDL----------VVEEELIPRTKLTGAASDHLPLVVRL 246 >gi|325269449|ref|ZP_08136066.1| endonuclease/exonuclease/phosphatase [Prevotella multiformis DSM 16608] gi|324988370|gb|EGC20336.1| endonuclease/exonuclease/phosphatase [Prevotella multiformis DSM 16608] Length = 290 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 36/308 (11%), Positives = 79/308 (25%), Gaps = 30/308 (9%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M R + L+ ++ + AQ++ + ++NI + + L + Sbjct: 1 MYR--LTTLILAMLLTCSLSAQRLYVGTYNIRYDNPDDRKEGNA-----WAQRCPQLCDF 53 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + QE+ + + + + + Sbjct: 54 INFEQPAVFGTQEVLVTQLRDLLQGLEAYAYIGVGRDDGREEGEYAAIFYRKDLLKLLDS 113 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYS 178 P + + A R E GK+ + + H+ Sbjct: 114 GNFWLSQTPERPSL-GWDAACIRICTWGKFEDRATGKQFYFFNTHM-----DHVGTVARR 167 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 S L+ Q+ L P ++ GDFN I + Sbjct: 168 ESARLILQRIGLLAK--------AQPTILTGDFNVDQTDEIYGIFSRSGILRDCYANARQ 219 Query: 239 KEKDSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + + ++ ID+ + + I N + +SDH Sbjct: 220 RMAPTGTWNDFMQDSRSNARIDHVFVSSDFDIPHYA-----IFTNSYWTGKSRRNISDHY 274 Query: 297 PISIDYDF 304 P+ + F Sbjct: 275 PVMVKLSF 282 >gi|253756379|ref|YP_003029519.1| surface-anchored DNA nuclease [Streptococcus suis BM407] gi|251818843|emb|CAZ56686.1| surface-anchored DNA nuclease [Streptococcus suis BM407] Length = 1039 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 44/328 (13%), Positives = 84/328 (25%), Gaps = 61/328 (18%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQEMGS 76 K+ + S+NI S S + + + + + D++ L E+ Sbjct: 624 PNDDKLTIASYNIENFSAN--------SKSTSDAKVQRIAKSFVSDLHSPDVIGLIEVQD 675 Query: 77 YNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N + T+ + N +I Sbjct: 676 NNGATNDGTTDASKSAERLIAAIQAAGGPTY-TYVDIAPENNKDGGQEGGNIRVGFLYNS 734 Query: 119 KNVRVLQQSY-----------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 K V + + + + A R+ + G+K+ VL Sbjct: 735 KRVSLSDKPIGTATQAVAWENGELNLSLGRIDPTNPAWAAVRKTLAAEFVFKGEKVVVLA 794 Query: 162 IHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215 HL S + L S AQ + D+ + V+ GDFN Sbjct: 795 NHLNSKRGDNGLYGKIQPVSFKSEEKRHILAQTIADFTKAGLAQNPNANIVMLGDFNDYE 854 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 ++ + S + N +D ++ N ++ + Sbjct: 855 FTKTIE-----ILEAGGMANLVSRHDASDRFSYFYNGNNQSLDNMLVSTNLFERYAFDMV 909 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 R SDH P+ + D Sbjct: 910 HVNSA----FMEEHGRASDHDPLLVQLD 933 >gi|228944800|ref|ZP_04107163.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228814828|gb|EEM61086.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 788 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|229120698|ref|ZP_04249941.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201] gi|228662703|gb|EEL18300.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201] Length = 788 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|229183381|ref|ZP_04310608.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1] gi|228600097|gb|EEK57690.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1] Length = 788 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 TINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|225863033|ref|YP_002748411.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus 03BB102] gi|225790557|gb|ACO30774.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus 03BB102] Length = 788 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 TINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|196036463|ref|ZP_03103859.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus W] gi|195990937|gb|EDX54909.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus W] Length = 788 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|49479799|ref|YP_035327.1| endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49331355|gb|AAT62001.1| endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 788 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 89/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFMFQGQNLVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + N +D+ ++ N + + ++ +I R Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|228932469|ref|ZP_04095350.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228827159|gb|EEM72912.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 788 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 TINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEEKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|253573925|ref|ZP_04851267.1| endonuclease/exonuclease/phosphatase [Paenibacillus sp. oral taxon 786 str. D14] gi|251846402|gb|EES74408.1| endonuclease/exonuclease/phosphatase [Paenibacillus sp. oral taxon 786 str. D14] Length = 258 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 86/286 (30%), Gaps = 40/286 (13%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +++++N+ +G + W + + K DADI+ +QE + + + Sbjct: 4 KIMTFNLRLNVASDGENAWP-------YRTKAVAEVIKRHDADIIGIQEGLH-DMLTDLE 55 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 P + R + + K P S+S + R Sbjct: 56 PLLPEYAWIGEGREGGNKGEYAAILYKKKNWTVGKAGHFSLSETPEELGARSWSTSHPRM 115 Query: 145 AVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + G + + HL E L+ ++ + + ++ + Sbjct: 116 CTWVTFKSQTGAEFAAFNTHL-----DHISEEAQQKGMELIRERMKEFR------TQTGL 164 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP------KEKDSRCNANKNLRNKIPI 257 P V+ GDFN + + ++ + KE + + + PI Sbjct: 165 PVVLTGDFNVEPA-----NAVITGLEQEGYRNAYSVLQQEKKEVGATVHHFLGGESGEPI 219 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 DY + + D G+ SDH P+ + Sbjct: 220 DYIFVSPDL---------QIQNVRVDRELYEGRYPSDHYPVIAEVS 256 >gi|229189268|ref|ZP_04316289.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876] gi|228594168|gb|EEK51966.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876] Length = 788 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 SINDGTIDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ I V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEDKRIQLAQEVNYFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEQGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|121998516|ref|YP_001003303.1| endonuclease/exonuclease/phosphatase [Halorhodospira halophila SL1] gi|121589921|gb|ABM62501.1| Endonuclease/exonuclease/phosphatase [Halorhodospira halophila SL1] Length = 570 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 93/305 (30%), Gaps = 26/305 (8%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 A VR+ ++N+ G + V+ LL ++L AD++ L EM Sbjct: 273 ALPPPEAGTVRVAAFNVENYFLTLGERGAASEVELERQRAKLLAAA-ESLHADVLVLVEM 331 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + F + R + ++ I ++A R+ V+ + ++ Sbjct: 332 ENRQDAPEDFVERLAASTGHPWR-LARGGETGSDAIKVSLAYREDRVQPVTETVRDA--- 387 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF-CFLDSLENTYSPSCS--LLSQQAQWL 191 V + G+ V IH KS D+ + C ++QA+ L Sbjct: 388 -RRVHHRPPPLVGFRPQGGGEPFAVAGIHFKSKTRCPDAGDVDRGQGCWNHRRTEQAEAL 446 Query: 192 KDWITQKKESLV---PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +++ + + P +IAGD N + Sbjct: 447 AEFLGRWRAERSEALPVLIAGDLNAYGGEDPARALAAA----GKVDLLAEHLAWPDRYTY 502 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK----------SRGKRLSDHCPI 298 +D+ + + I +E R SDH PI Sbjct: 503 VFRGESGYLDHLQAHPALAERVAAVHRHPINADEPRFLEFDGDPGRVREDAYRSSDHDPI 562 Query: 299 SIDYD 303 ++D + Sbjct: 563 AVDLE 567 >gi|118476676|ref|YP_893827.1| endonuclease/exonuclease/phosphatase [Bacillus thuringiensis str. Al Hakam] gi|118415901|gb|ABK84320.1| endonuclease/exonuclease/phosphatase [Bacillus thuringiensis str. Al Hakam] Length = 788 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 87/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPHNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 ++ L ++ R+ + G+ + V+ HL S + Sbjct: 601 LVAVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N K ++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKALEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + N +D+ ++ N + + +I R Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIAPYTSVDPVHL----NSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|167840494|ref|ZP_02467178.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia thailandensis MSMB43] Length = 624 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 93/315 (29%), Gaps = 47/315 (14%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ N + + + + R Y + K LDAD++ L E+ Sbjct: 294 LRVASFNVLNYFNGDGAGNGFDDPNNRGAKSYEEFVRQDAKIVSALKALDADVIGLMEIE 353 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + R+++ R + I A+ + V+ P+ A Sbjct: 354 NDGYGPLSAVRQLAAKLGDNWRVVDPGSARLGGDAIAVALIYDSRKVK------PVGNAA 407 Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186 NR+ + + + V HLKS D+ + + S+ Sbjct: 408 TLAIDDRNRQPLAQTFRPIGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSR 467 Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A + DW+ + ++ GD N + ++ + + + Sbjct: 468 AAAKVADWLARNPTGAHSEGVLLIGDLNSHTYEDPV-----RALESRGYVNLVSSKIGAG 522 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287 + +D+ + + I +E Sbjct: 523 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKTAEQQRTYYAP 582 Query: 288 RGKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 583 DAYRSSDHDPVLIDI 597 >gi|298375120|ref|ZP_06985077.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] gi|298267620|gb|EFI09276.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] Length = 306 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 36/324 (11%), Positives = 81/324 (25%), Gaps = 43/324 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K + + +F A+ + + ++N+ + + + Y + Q Sbjct: 1 MKKVIYSFIFLFCAVLTLQAETMVVATYNLRNANGGDSTNGNG-----WGQRYPYIAQIV 55 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + DI QE + + S T K Sbjct: 56 QFHGFDIFGTQEGKYPQLQDLRQAMPGYDYIGVGRDDGKQAGEHSAIFYRTD-----KFE 110 Query: 122 RVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + + L D + R L +L Sbjct: 111 VLEHGDFWLSEITDRPNKGWDAVLPRICTWGEFRDKQTGFTFLFFNLHMDHVG------- 163 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 ++ A+ + I + +P ++ GDFN I + I Sbjct: 164 ---VQARAESAKLILKKIKEF-PKRLPAILTGDFNVDQTSESYKLLDGSGIMRDSYEIAD 219 Query: 238 PKEKDSRCNANKNLR--NKIPIDYFVMDQNAYKF---LIQESFS-------------EIL 279 + + + N ID+ + + ++ +++ Sbjct: 220 FRYAPNGTFNGFHPDRKNDSRIDHLFLTKEFEVKKYGILTDTYRSEVKESAQKEQNGNFP 279 Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303 K + SDH P+ I + Sbjct: 280 KEVSLSKYEARTPSDHFPVMIVVE 303 >gi|116695065|ref|YP_840641.1| extracellular nuclease [Ralstonia eutropha H16] gi|113529564|emb|CAJ95911.1| extracellular nuclease [Ralstonia eutropha H16] Length = 600 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 40/317 (12%), Positives = 91/317 (28%), Gaps = 46/317 (14%) Query: 21 AQKVRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQ-------YAKNLDADIVFLQ 72 A +R+ ++N+ + + R D L + + LDAD++ + Sbjct: 288 ATTLRVAAFNLQNYFNGDGQGGGFDAPGNRGAQDAAALARQEARLLAALRGLDADVIGVM 347 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVRVLQQSYPLL 131 E+ + + R+++ ++ I + + + P Sbjct: 348 EVENDGYGQYSAIRQLATRLGPDWRVLDPGTPALGSNAIAVGLLYNAR------TAVPAG 401 Query: 132 GAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSL 183 ++ +R+ + G + V+ H KS ++ Sbjct: 402 RTATTWLGERSRQPLAGTFRAAAGGTPVTVVVNHFKSKTCTEATGAQADQGDGQGCWNPA 461 Query: 184 LSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 Q AQ L +W+ + ++ GD N + + + Sbjct: 462 RVQAAQALAEWLGTTPTGVAGAGVLVIGDLNSYAMEDPV-----RVLARRGYADMVAEFA 516 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------------ 289 + +D+ + D A + ++ I +E S Sbjct: 517 GKPAYSYVYNGQAGYLDHVLADAAAARHVMAVHAWHINADEPPAFSYAPAPGAPAVPGHY 576 Query: 290 ----KRLSDHCPISIDY 302 R SDH P+ +D+ Sbjct: 577 APGPYRSSDHDPLVVDF 593 >gi|150008302|ref|YP_001303045.1| hypothetical protein BDI_1671 [Parabacteroides distasonis ATCC 8503] gi|255015456|ref|ZP_05287582.1| hypothetical protein B2_16223 [Bacteroides sp. 2_1_7] gi|149936726|gb|ABR43423.1| conserved hypothetical protein with endonuclease/exonuclease/phosphatase family domain [Parabacteroides distasonis ATCC 8503] Length = 306 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 36/324 (11%), Positives = 82/324 (25%), Gaps = 43/324 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K + + +F A+ + + ++N+ + + + Y + Q Sbjct: 1 MKKVIYSFIFLFCAVLTLQAETMVVATYNLRNANGGDSTNGNG-----WGQRYPYIAQIV 55 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + DI QE + + S T K Sbjct: 56 QFHGFDIFGTQEGKYSQLQDLRQAMPGYDYIGVGRDDGKRAGEHSAIFYRTD-----KFE 110 Query: 122 RVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + + L D + R L +L Sbjct: 111 VLEHGDFWLSEITDRPNKGWDAVLPRICTWGEFRDKQTGFTFLFFNLHMDHVG------- 163 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 ++ A+ + + I + +P ++ GDFN I + I Sbjct: 164 ---VQARAESAKLILEKIKEF-PKKLPAILTGDFNVDQTSESYQLLDGSGIMRDSYEIAD 219 Query: 238 PKEKDSRCNANKNLRNK--IPIDYFVMDQNAYKF---LIQESFS-------------EIL 279 + + + K ID+ + + ++ +++ Sbjct: 220 FRYAPNGTFNGFHPDRKTDSRIDHLFLTKEFEVKKYGILTDTYRSEAKESARKEQNGNFP 279 Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303 K + SDH P+ I + Sbjct: 280 KEVSLSKYEARTPSDHFPVMIVVE 303 >gi|52144632|ref|YP_082195.1| sphingomyelin phosphodiesterase [Bacillus cereus E33L] gi|51978101|gb|AAU19651.1| sphingomyelin phosphodiesterase [Bacillus cereus E33L] Length = 378 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 99/314 (31%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + DIV L E+ Sbjct: 74 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDIVILNEVF 127 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K V + Sbjct: 128 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKV 187 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 188 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 242 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + + GD N N +KT+ + Sbjct: 243 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 302 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 303 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 362 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 363 NDYSDHYPVEATIS 376 >gi|229137476|ref|ZP_04266087.1| Sphingomyelinase C [Bacillus cereus BDRD-ST26] gi|228646034|gb|EEL02257.1| Sphingomyelinase C [Bacillus cereus BDRD-ST26] Length = 338 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 103/320 (32%), Gaps = 44/320 (13%) Query: 17 TASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 +++ A +++++ N+ LS L+ N + +D Y K + D+V Sbjct: 28 SSAQADTSTDQNNILKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVV 81 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKN 120 L E+ +A ++ T E S+ +A+ K Sbjct: 82 ILNEVFDNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKW 141 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 V + Y N+ V ++ N + + V+ HL++ DS+ SP+ Sbjct: 142 PIVEKVQYVFANGCGP-DNLSNKGFVYAKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA 197 Query: 181 CSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSL 234 S+ + Q + ++D+I + + + GD N N +KT+ + Sbjct: 198 -SVRTNQLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPS 256 Query: 235 IRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 N +DY + ++ E+ + + Sbjct: 257 YTGHTATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFVENKVLQPKSPQWTVTSW 316 Query: 290 KR------LSDHCPISIDYD 303 + SDH P++ Sbjct: 317 LKKYTYDDYSDHYPVAATIS 336 >gi|228926225|ref|ZP_04089300.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228833478|gb|EEM79040.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 788 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|229056444|ref|ZP_04195857.1| Sphingomyelinase C [Bacillus cereus AH603] gi|228720918|gb|EEL72467.1| Sphingomyelinase C [Bacillus cereus AH603] Length = 333 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 50/314 (15%), Positives = 104/314 (33%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSVNQNNTLKVMTHNVYMLSTN----LYPNWGQNERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K V + Sbjct: 83 DNSASDRLLGNLKREYPNQTAVLGRSSGNEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V V+ N + + V+ HL++ DS+ SP+ S+ ++ Sbjct: 143 QY-VFEKGCGPDNLSNKGFVYTKVKKNDRFVHVIGTHLQA---EDSMCGNTSPA-SVRTK 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q Q ++++I + + +I GD N N +KT+ + Sbjct: 198 QLQEIQEFIKNKNIPNNEYVLIGGDMNVNKINAENNSNSEYASMFKTLHASVPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENNVLQPKSPEWSVTSWFQKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 NDYSDHYPVEATIS 331 >gi|229090130|ref|ZP_04221380.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-42] gi|228693207|gb|EEL46918.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-42] Length = 788 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 TLNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|170688095|ref|ZP_02879307.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0465] gi|254682749|ref|ZP_05146610.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. CNEVA-9066] gi|170667990|gb|EDT18741.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0465] Length = 788 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|167635355|ref|ZP_02393669.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0442] gi|254740190|ref|ZP_05197882.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Kruger B] gi|167529183|gb|EDR91936.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0442] Length = 788 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|49480244|ref|YP_034934.1| sphingomyelin phosphodiesterase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49331800|gb|AAT62446.1| sphingomyelin phosphodiesterase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 378 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 98/314 (31%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 74 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 127 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S +A+ K V + Sbjct: 128 DNSASNRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 187 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 188 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 242 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + + GD N N +KT+ + Sbjct: 243 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 302 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 303 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 362 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 363 NDYSDHYPVEATIS 376 >gi|30261191|ref|NP_843568.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Ames] gi|47777892|ref|YP_017700.2| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|30254805|gb|AAP25054.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Ames] gi|47551597|gb|AAT30175.2| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. 'Ames Ancestor'] Length = 583 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 284 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 335 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 336 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 395 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 396 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 455 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N KT++ Sbjct: 456 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 510 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 511 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGR 566 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 567 VSDHDPVLAQID 578 >gi|49184024|ref|YP_027276.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Sterne] gi|65318458|ref|ZP_00391417.1| COG2374: Predicted extracellular nuclease [Bacillus anthracis str. A2012] gi|165871845|ref|ZP_02216488.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0488] gi|167640270|ref|ZP_02398536.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0193] gi|170707621|ref|ZP_02898073.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0389] gi|177654201|ref|ZP_02936174.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0174] gi|190566721|ref|ZP_03019638.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis Tsiankovskii-I] gi|227816075|ref|YP_002816084.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. CDC 684] gi|229604339|ref|YP_002865620.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0248] gi|254725540|ref|ZP_05187322.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A1055] gi|254734166|ref|ZP_05191879.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Western North America USA6153] gi|254753529|ref|ZP_05205565.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Vollum] gi|254758627|ref|ZP_05210654.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Australia 94] gi|49177951|gb|AAT53327.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. Sterne] gi|164712422|gb|EDR17956.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0488] gi|167511871|gb|EDR87251.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0193] gi|170127396|gb|EDS96271.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0389] gi|172080908|gb|EDT65988.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0174] gi|190562273|gb|EDV16241.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis Tsiankovskii-I] gi|227003436|gb|ACP13179.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. CDC 684] gi|229268747|gb|ACQ50384.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0248] Length = 788 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N KT++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|319759037|gb|ADV70979.1| DNA nuclease [Streptococcus suis JS14] Length = 1039 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 44/328 (13%), Positives = 83/328 (25%), Gaps = 61/328 (18%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQEMGS 76 K+ + S+NI S S + + + + + D++ L E+ Sbjct: 624 PNDDKLTIASYNIENFSAN--------SKSTSDAKVQRIAKSFVSDLHSPDVIGLIEVQD 675 Query: 77 YNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N + T+ + N +I Sbjct: 676 NNGATNDGTTDASKSAERLIAAIQAAGGPTY-TYVDIAPENNKDGGQEGGNIRVGFLYNS 734 Query: 119 KNVRVLQQSY-----------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 K V + + + + A R+ + G+K+ VL Sbjct: 735 KRVSLSDKPIGTATQAVAWENGELNLSLGRIDPTNPAWAAVRKTLAAEFVFKGEKVVVLA 794 Query: 162 IHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215 HL S + L S AQ + D+ + V+ GDFN Sbjct: 795 NHLNSKRGDNGLYGKIQPVSFKSEEKRHILAQTIADFTKAGLAQNPNANIVMLGDFNDYE 854 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 ++ + S + N +D ++ N + + Sbjct: 855 FTKTIE-----ILEAGGMANLVSRHDASDRFSYFYNGNNQSLDNMLVSTNLLERYAFDMV 909 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 R SDH P+ + D Sbjct: 910 HVNSA----FMEEHGRASDHDPLLVQLD 933 >gi|253752620|ref|YP_003025761.1| surface-anchored DNA nuclease [Streptococcus suis SC84] gi|253754446|ref|YP_003027587.1| surface-anchored DNA nuclease [Streptococcus suis P1/7] gi|251816909|emb|CAZ52558.1| surface-anchored DNA nuclease [Streptococcus suis SC84] gi|251820692|emb|CAR47454.1| surface-anchored DNA nuclease [Streptococcus suis P1/7] Length = 1039 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 44/328 (13%), Positives = 83/328 (25%), Gaps = 61/328 (18%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQEMGS 76 K+ + S+NI S S + + + + + D++ L E+ Sbjct: 624 PNDDKLTIASYNIENFSAN--------SKSTSDAKVQRIAKSFVSDLHSPDVIGLIEVQD 675 Query: 77 YNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N + T+ + N +I Sbjct: 676 NNGATNDGTTDASKSAERLIAAIQAAGGPTY-TYVDIAPENNKDGGQEGGNIRVGFLYNS 734 Query: 119 KNVRVLQQSY-----------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 K V + + + + A R+ + G+K+ VL Sbjct: 735 KRVSLSDKPIGTATQAVAWENGELNLSLGRIDPTNPAWAAVRKTLAAEFVFKGEKVVVLA 794 Query: 162 IHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215 HL S + L S AQ + D+ + V+ GDFN Sbjct: 795 NHLNSKRGDNGLYGKIQPVSFKSEEKRHILAQTIADFTKAGLAQNPNANIVMLGDFNDYE 854 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 ++ + S + N +D ++ N + + Sbjct: 855 FTKTIE-----ILEAGGMANLVSRHDASDRFSYFYNGNNQSLDNMLVSTNLLERYAFDMV 909 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 R SDH P+ + D Sbjct: 910 HVNSA----FMEEHGRASDHDPLLVQLD 933 >gi|146319622|ref|YP_001199334.1| DNA nuclease [Streptococcus suis 05ZYH33] gi|146321820|ref|YP_001201531.1| DNA nuclease [Streptococcus suis 98HAH33] gi|145690428|gb|ABP90934.1| DNA nuclease [Streptococcus suis 05ZYH33] gi|145692626|gb|ABP93131.1| DNA nuclease [Streptococcus suis 98HAH33] gi|292559239|gb|ADE32240.1| DNA nuclease [Streptococcus suis GZ1] Length = 1059 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 44/328 (13%), Positives = 83/328 (25%), Gaps = 61/328 (18%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQEMGS 76 K+ + S+NI S S + + + + + D++ L E+ Sbjct: 644 PNDDKLTIASYNIENFSAN--------SKSTSDAKVQRIAKSFVSDLHSPDVIGLIEVQD 695 Query: 77 YNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N + T+ + N +I Sbjct: 696 NNGATNDGTTDASKSAERLIAAIQAAGGPTY-TYVDIAPENNKDGGQEGGNIRVGFLYNS 754 Query: 119 KNVRVLQQSY-----------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 K V + + + + A R+ + G+K+ VL Sbjct: 755 KRVSLSDKPIGTATQAVAWENGELNLSLGRIDPTNPAWAAVRKTLAAEFVFKGEKVVVLA 814 Query: 162 IHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215 HL S + L S AQ + D+ + V+ GDFN Sbjct: 815 NHLNSKRGDNGLYGKIQPVSFKSEEKRHILAQTIADFTKAGLAQNPNANIVMLGDFNDYE 874 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 ++ + S + N +D ++ N + + Sbjct: 875 FTKTIE-----ILEAGGMANLVSRHDASDRFSYFYNGNNQSLDNMLVSTNLLERYAFDMV 929 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 R SDH P+ + D Sbjct: 930 HVNSA----FMEEHGRASDHDPLLVQLD 953 >gi|281425257|ref|ZP_06256170.1| hypothetical protein HMPREF0971_02229 [Prevotella oris F0302] gi|281400550|gb|EFB31381.1| putative endonuclease/exonuclease/phosphatase family protein [Prevotella oris F0302] Length = 299 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 86/305 (28%), Gaps = 29/305 (9%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +++ + ++ L CT +AQ + + S+NI + + ++ + +R L + Sbjct: 17 MKRITVFIIALLFTCTL-MAQPLYVGSYNIRY-NVSDDIAEGNSWKQR----CPHLCDFI 70 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 I QE+ + + + + + + + + Sbjct: 71 NFEQPVIFGAQEVLADQLHDLLQGLDNYGYIGVGREDGKEAGEYAAIFYKKDLLKLLDSG 130 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSP 179 P + + A R + + K + + H+ Sbjct: 131 YFWLSETPEKPST-GWDAACIRICTWGKFQDKASKKTFYFFNTHM-----DHVGAVARRE 184 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 S L+ Q+ + L ++ GDFN + + + Sbjct: 185 SARLIIQRMKEL--------TGGKYTILTGDFNANQTDESYKMFSESGFLRDCYVNAHQR 236 Query: 240 EKDSRCNANKNLRNK--IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ + ++ + I N + + +SDH P Sbjct: 237 MAPVGTWNDYMQDYPGVARIDHIFVTKDF-----DINHYGIFTNSYWLGKTRRNISDHYP 291 Query: 298 ISIDY 302 + + Sbjct: 292 VMVKL 296 >gi|255532422|ref|YP_003092794.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] gi|255345406|gb|ACU04732.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] Length = 312 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 47/288 (16%), Positives = 80/288 (27%), Gaps = 44/288 (15%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P K++++++NI+ S D + K D D+V LQE+ Sbjct: 65 PPVQVTGAKIKVMTYNIH--------IGNPPSKPAGIVDLPAIAAVIKAQDPDLVALQEV 116 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + T ++K + AV + + + Y L Sbjct: 117 DVNTNRSGTSLDEAKELARLTGMNYFYTKAIDYDGGQFGDAVLSRFPILESKRYELPVTA 176 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R + VE G++ HL D+ QA L Sbjct: 177 KLGG--ETRSVALITVEKEGQRFLFASTHLDHLTAEDN-----------RMLQATELVKI 223 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + +P +IAGDFN + + + Sbjct: 224 VKTF---TLPLIIAGDFNATPMSNPL-TILRQELSWGCKSSCPL--------TFSAQKPG 271 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IDY +M E F+ + Y SDH P+ + Sbjct: 272 STIDYVMMRP-------AEKFNVLSYVT----VNESYASDHLPLVTEI 308 >gi|196044355|ref|ZP_03111591.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus 03BB108] gi|196024994|gb|EDX63665.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus 03BB108] Length = 788 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 86/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPHNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L ++ R+ + G+ + V+ HL S + Sbjct: 601 LAAVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + +++ QKK + P V+ GD N K ++ Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKALEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + N +D+ ++ N + + +I R Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIAPYTSVDPVHL----NSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ D Sbjct: 772 VSDHDPVLAQID 783 >gi|212694164|ref|ZP_03302292.1| hypothetical protein BACDOR_03690 [Bacteroides dorei DSM 17855] gi|237727703|ref|ZP_04558184.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D4] gi|265751009|ref|ZP_06087072.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|212663384|gb|EEB23958.1| hypothetical protein BACDOR_03690 [Bacteroides dorei DSM 17855] gi|229434559|gb|EEO44636.1| endonuclease/exonuclease/phosphatase family [Bacteroides dorei 5_1_36/D4] gi|263237905|gb|EEZ23355.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 336 Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 36/341 (10%), Positives = 97/341 (28%), Gaps = 47/341 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRT 50 ++K +L L + + R++ +N+ L + + +L + + R Sbjct: 1 MKKTILFLCLCYLVGVTYAQEPFRVMFYNVENLFDCQHDTLKNDYEFLPDAPKGWTQARY 60 Query: 51 TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 + + D+V L E+ + + + + + + + Sbjct: 61 HDKLARIAKVIIATGEENVPDLVGLCEVENDHCLKDLTENSPLREAGYRYVMTDSPDE-- 118 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLK 165 I A+ ++ +++ ++ + K+ R R + + ++ +G + V H+ Sbjct: 119 -RGIDVALLYQRGTFKLVGKNCISVPYKEI-ERRPTRDILHVTGQVASGDTLDVFVCHMP 176 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 S + Y L + Q + +I GDFN Sbjct: 177 SRAGGEEKSEPYR----LFTAQILKIAADSVMNIRQHPNVMIMGDFNDYPTNNSIAKVLG 232 Query: 226 KTI--DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD-------QNAYKFLIQESFS 276 + + + + +D ++ + + Sbjct: 233 AVAPKSGVQAKKLYNLMDGRKEGTYRYRGEWGVLDQLIVSGFLLQGHDSMRTSYDKAQIL 292 Query: 277 EILY--------------NEDDIKSRGKRLSDHCPISIDYD 303 + + K SDH P+ +D++ Sbjct: 293 KYPFLLEEDEKYGGNIPSRTYWGKKYHGGYSDHLPVCVDFE 333 >gi|206977785|ref|ZP_03238675.1| sphingomyelin phosphodiesterase C [Bacillus cereus H3081.97] gi|206743982|gb|EDZ55399.1| sphingomyelin phosphodiesterase C [Bacillus cereus H3081.97] Length = 333 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 101/314 (32%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + + GD N N +KT+ + Sbjct: 198 QLKEIQDFIENKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKILQPKSPQWTVTSWLKKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P++ Sbjct: 318 DDYSDHYPVAATIS 331 >gi|196042087|ref|ZP_03109372.1| sphingomyelin phosphodiesterase C [Bacillus cereus NVH0597-99] gi|196027112|gb|EDX65734.1| sphingomyelin phosphodiesterase C [Bacillus cereus NVH0597-99] Length = 333 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 97/310 (31%), Gaps = 37/310 (11%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +++++ N+ LS L+ N + +D Y K + D+V L E+ +A Sbjct: 33 QNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVFDNSA 86 Query: 80 VAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 ++ T E S +A+ K V + Y Sbjct: 87 SDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKVQYVF 146 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Q + Sbjct: 147 ANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTNQLKE 201 Query: 191 LKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 ++D+I + + + GD N N +KT+ + Sbjct: 202 IQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTATWDA 261 Query: 245 C-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LS 293 N +DY + ++ E+ + + + S Sbjct: 262 TTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTYNDYS 321 Query: 294 DHCPISIDYD 303 DH P+ Sbjct: 322 DHYPVEATIS 331 >gi|229010475|ref|ZP_04167677.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048] gi|228750673|gb|EEM00497.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048] Length = 788 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + V + N +I V+ Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600 Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + L +S R+ + G+ + V+ HL S + Sbjct: 601 LAAVPKLLDKNVVRIGDESSLFESTRKPLAAEFTFQGQNVVVVANHLNSKIGDATPFGKV 660 Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S Q AQ + ++ QKK + P V+ GD N K ++ Sbjct: 661 QPLVLKSEEKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKALEGT 715 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N +D+ ++ N + + ++ +I R Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PYTIVDPVHLNSNIMKEHGR 771 Query: 292 LSDHCPISIDYD 303 +SDH P+ + D Sbjct: 772 VSDHDPVLVQID 783 >gi|223933529|ref|ZP_03625511.1| LPXTG-motif cell wall anchor domain protein [Streptococcus suis 89/1591] gi|223897789|gb|EEF64168.1| LPXTG-motif cell wall anchor domain protein [Streptococcus suis 89/1591] Length = 651 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 45/328 (13%), Positives = 82/328 (25%), Gaps = 61/328 (18%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQEMGS 76 K+ + S+NI S S + + + + + DI+ L E+ Sbjct: 236 PNDDKLTIASYNIENFSAN--------SKSTSDAKVQRIAKSFVSDLHSPDIIGLIEVQD 287 Query: 77 YNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N + T+ + N +I Sbjct: 288 NNGATNDGTTDASKSAERLIAAIQAAGGPTY-TYVDIAPENNKDGGQEGGNIRVGFLYNS 346 Query: 119 KNVRVLQQSY-----------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 K V + + + + A R+ + G+K+ VL Sbjct: 347 KRVSLSDKPIGTATQAVAWENGELNLSLGRIDPTNPAWAAVRKTLAAEFVFKGEKVVVLA 406 Query: 162 IHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215 HL S + L S AQ + D+ + V+ GDFN Sbjct: 407 NHLNSKRGDNGLYGKIQPVSFKSEEKRHILAQIIADFTKAGLAQNPNANIVMLGDFNDYE 466 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 ++ + S + N +D ++ N + Sbjct: 467 FTKTIE-----ILETGGMANLVSRHDASDRFSYFYNGNNQSLDNMLVSTNLLDRYAFDMV 521 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 R SDH P+ + D Sbjct: 522 HVNSA----FMEEHGRASDHDPLLVQLD 545 >gi|84387306|ref|ZP_00990326.1| putative phospholipase C precursor [Vibrio splendidus 12B01] gi|84377755|gb|EAP94618.1| putative phospholipase C precursor [Vibrio splendidus 12B01] Length = 444 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 91/296 (30%), Gaps = 36/296 (12%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 A ++++++NI L Y L+ +Y K D++ LQE+ + Sbjct: 174 PEPDANTLKVMTYNIWALPAIASHIGD---------RYDLIPKYVKGY--DVLALQEVFA 222 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + + + I I R V Q +P D Sbjct: 223 NGRDEFLRELAKEYPYQTKMLDKDGINIYDGGVI---IVSRYPIVNEAQYVFPDCTGTDC 279 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 F+ V NG+ V H SF + + +Q + L + Sbjct: 280 FADK---GVNYAEVIKNGQAYHVFGTHTASFDTNTARDYRQRQ-----FKQMRQLAQSLE 331 Query: 197 QKKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---- 251 + + +GDFN + + G+ + + ++ + S + N Sbjct: 332 --IPTSETVIYSGDFNVNKLKFPGDYQQMFANLQADEPE--YSGYTASTFDPRINNFAGE 387 Query: 252 -----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +DY V+ + + ++ + + LSDH P+S Sbjct: 388 PMSGGENVEYLDYVVVSSEYAQKTHNNNRVDVPRSTSSELWKHYNLSDHFPVSAVI 443 >gi|49183669|ref|YP_026921.1| sphingomyelinase C [Bacillus anthracis str. Sterne] gi|49177596|gb|AAT52972.1| sphingomyelinase C [Bacillus anthracis str. Sterne] Length = 378 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 98/314 (31%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 74 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 127 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S +A+ K V + Sbjct: 128 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 187 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 188 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 242 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + + GD N N +KT+ + Sbjct: 243 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 302 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 303 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 362 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 363 NDYSDHYPVEATIS 376 >gi|325287411|ref|YP_004263201.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489] gi|324322865|gb|ADY30330.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489] Length = 279 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 84/307 (27%), Gaps = 38/307 (12%) Query: 1 MIRKYVLALVFFLVPCTA-SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 M ++ ++ LV T ++ Q V+ +++NI + + ++ W + Sbjct: 1 MNKRIIIVLVLIFSFTTTKALCQSVKAMTYNIKYDNTSDTINNWNFRK-------AKMAA 53 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 ++ + +QE + S AI K Sbjct: 54 LIQHYSPSFLGIQEGLHNQVSYLDSNLPNYNYIGVGRDDGKQKGEYS------AIYYNKN 107 Query: 120 NVRVLQQSYPLLGAKD-----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 N +V++ + L + A R L + K + + Sbjct: 108 NFKVIKSNTFWLSTTPNKISVGWDAAMERICTYGLFQHKKTKQYYWVFNAHF-------- 159 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 A+ + + I P ++ GDFN D + Sbjct: 160 --DHIGVEARKNSAKLIVEKIKNLNTKNYPVILMGDFNVTPTTEAITTITNYIPDSYTNS 217 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + P N N IDY +N ++ DD K +SD Sbjct: 218 LTTPYGPKGTFNGFTNRILDHRIDYVFA-KNLNVLSVKV--------IDDRLDNNKHISD 268 Query: 295 HCPISID 301 H P+ Sbjct: 269 HLPVLAT 275 >gi|167743665|ref|ZP_02416439.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 14] gi|167899281|ref|ZP_02486682.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 7894] gi|167915957|ref|ZP_02503048.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 112] gi|167923801|ref|ZP_02510892.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei BCC215] gi|237509278|ref|ZP_04521993.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei MSHR346] gi|254184827|ref|ZP_04891416.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1655] gi|184215419|gb|EDU12400.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1655] gi|235001483|gb|EEP50907.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei MSHR346] Length = 624 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 94/315 (29%), Gaps = 47/315 (14%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ N + + + R +Y + K LDAD++ L E+ Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIE 353 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + + S R + I A+ + V+ P+ A Sbjct: 354 NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVK------PIGNAA 407 Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186 NR+ + + + V HLKS D+ + + S+ Sbjct: 408 TLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSR 467 Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A + DW+ + ++ GD N +T++ + + + Sbjct: 468 AAAKIADWLARNPTGAPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKTGAG 522 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287 + +D+ + + I +E Sbjct: 523 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAP 582 Query: 288 RGKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 583 DAYRSSDHDPVLIDI 597 >gi|190572318|ref|YP_001970163.1| hypothetical protein Smlt0242 [Stenotrophomonas maltophilia K279a] gi|190010240|emb|CAQ43848.1| unnamed protein product [Stenotrophomonas maltophilia K279a] Length = 570 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 94/317 (29%), Gaps = 36/317 (11%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQYAKNLDADI 68 P +V + + ++N+ +G ++ + + L L AD+ Sbjct: 261 PAVPTVPGNLHVAAFNLENFFNGDGQGGGFPTLRGARTLEEHKAQVAKLVTTVNALGADV 320 Query: 69 VFLQEMGS-----YNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVR 122 L E+ + +A+A++ R ++ +N I I R ++ Sbjct: 321 AALMELENDGYGPQSAIAELVDALNRDRGAQGDWRFVDAGNGPGDNPIRVGIIYRSARLQ 380 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLD------SLEN 175 + + L G +R + + G V+ H KS D + Sbjct: 381 PVGKPATLTGGPFVEH---SRVPLAQAFQGKQGAPFVVVANHFKSKGCRDAAGADADHND 437 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + AQ L W+ V+ GDFN +T+ Sbjct: 438 NQGCWNATRVTSAQQLHAWLQTDPTGTGAKDAVLLGDFNAYAMEDPI-----RTLHDLGW 492 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG---- 289 F K + +D+ ++ K L + +E D Sbjct: 493 QDAFKVAKVEHPYSYVYNGYTGRLDHALLSPGMAKRLRGAAEWHSNADEQDASGYQGRNV 552 Query: 290 ---KRLSDHCPISIDYD 303 R SDH P+ + +D Sbjct: 553 QGPWRSSDHDPLLLGFD 569 >gi|229016006|ref|ZP_04172963.1| Sphingomyelinase C [Bacillus cereus AH1273] gi|229022224|ref|ZP_04178770.1| Sphingomyelinase C [Bacillus cereus AH1272] gi|228739078|gb|EEL89528.1| Sphingomyelinase C [Bacillus cereus AH1272] gi|228745285|gb|EEL95330.1| Sphingomyelinase C [Bacillus cereus AH1273] Length = 333 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 103/313 (32%), Gaps = 37/313 (11%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 30 STNQNDTLKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVVILNEVFD 83 Query: 77 YNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 +A ++ T E S+ +A+ K V + Sbjct: 84 NSASNRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKIQ 143 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 Y + N+ V V+ N + + V+ HL++ DS+ SP+ S+ ++Q Sbjct: 144 Y-VFEKGCGPDNLSNKGFVYTKVKKNDRFVHVIGTHLQA---EDSMCGNTSPA-SVRTKQ 198 Query: 188 AQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKEK 241 Q ++++I + + +I GD N N +KT+ + Sbjct: 199 LQEIQEFIKNKNIPNNEYVLIGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTAT 258 Query: 242 DSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR----- 291 N +DY + ++ E+ + + + Sbjct: 259 WDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSHIENKVLQPKSPQWTVTSWFKKYTYD 318 Query: 292 -LSDHCPISIDYD 303 SDH P+ Sbjct: 319 DYSDHYPVESTIS 331 >gi|167765272|ref|ZP_02437385.1| hypothetical protein BACSTE_03660 [Bacteroides stercoris ATCC 43183] gi|167696900|gb|EDS13479.1| hypothetical protein BACSTE_03660 [Bacteroides stercoris ATCC 43183] Length = 287 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 94/316 (29%), Gaps = 42/316 (13%) Query: 1 MIRKYVLALVFFLVPCTA-----SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55 M + +L L F +V C S +V ++S+NI + ++G++ W+ R Sbjct: 1 MKKIILLFLSFGVVSCGQVKQQVSEQARVNVMSYNIRYDNPEDGMNNWQYRKDRA----- 55 Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + D DI+ QE+ + + S A Sbjct: 56 --ATAIRFYDVDILGTQEVLHNQLEDLKQRLPEYGVIGVGREDGKVKGEYSALWYKKARF 113 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSL 173 + P + + A R A + +I+GK+ + L+ HL Sbjct: 114 ELLASGYFWLSETPEIAGSRGWDGACERIASWGKLKDKISGKEYFALNTHL-----DHIG 168 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTID 229 SL+ + L D +P ++ GDFN + K + Sbjct: 169 VVARREGVSLILDRVNELSD--------GLPVIVTGDFNAEPESDVIKHMTDAENPKHLQ 220 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + + + IDY + + + Y Sbjct: 221 DTRLMSPIVYGPSWSFHDFGKIPYDKRPLIDYVFVRNDL---------KVLRYGVLAETE 271 Query: 288 RGKRLSDHCPISIDYD 303 + LSDH P+ + + Sbjct: 272 GSEFLSDHAPVLVTVE 287 >gi|229095326|ref|ZP_04226318.1| Sphingomyelinase C [Bacillus cereus Rock3-29] gi|229114275|ref|ZP_04243696.1| Sphingomyelinase C [Bacillus cereus Rock1-3] gi|228669295|gb|EEL24716.1| Sphingomyelinase C [Bacillus cereus Rock1-3] gi|228688185|gb|EEL42071.1| Sphingomyelinase C [Bacillus cereus Rock3-29] Length = 333 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 101/314 (32%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TPTNQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAAGYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K V + Sbjct: 83 DNSASDRLLGNLKREYPNQTAVLGRSSGNEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + V+ HL++ DS+ SP+ S+ ++ Sbjct: 143 QY-VFEKGCGPDNLSNKGFVYTKIKRNDSFVHVIGTHLQA---EDSMCGKTSPA-SVRTK 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q Q ++++I + + +I GD N N +KT+ + Sbjct: 198 QLQEIQEFIKNKNIPNNEYVLIGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSHIENKVLQPKSPQWTVTSWFKKYTY 317 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 318 NDYSDHYPVEATIS 331 >gi|166710547|ref|ZP_02241754.1| hypothetical protein Xoryp_03535 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 288 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 91/299 (30%), Gaps = 29/299 (9%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 +LAL L AS +R++S+N+ V + + KR T T + K Sbjct: 17 ILALCITLPAFAASAPAPLRVMSFNVR-------VPVDSDGDKRWTVRRTSMVALIKQTH 69 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 D+ QE+ A + F R + A++V + L Sbjct: 70 PDVFGTQELVQEQAQYLASHLPAYRWFGKGRRADGSDEHMGVFYDSNALSVIESGDFWL- 128 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 P + S++ R L E ++ + +LS Sbjct: 129 SETPEVPGSSSWNTDLPRMVTWALFERRNDTRRFYLLNTHLPHRDQDEAAREHGARVILS 188 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + A + +P V+ GDFN + + + + + Sbjct: 189 RIAT---------LPADIPVVVTGDFNSDPDQGTYR--TLTAVLGDARAHVAKPQGPEKT 237 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + ID+ + + ++ D + G SDH P+ ++++ Sbjct: 238 FQDFTTQPTRRIDWILFRG----------LTPTRFSTLDARPGGILPSDHYPVLAEFEW 286 >gi|153005530|ref|YP_001379855.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5] gi|152029103|gb|ABS26871.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5] Length = 260 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 86/281 (30%), Gaps = 47/281 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R++SWN+++L +G D + + +L DI LQE+G A Sbjct: 1 MRILSWNVHSLRGTDG-----------RRDPERIARVIADLRPDIAGLQEVGGELAADG- 48 Query: 84 FPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 P++ S + + S + ++ ++Y L S Sbjct: 49 -PRDVAEALASLTGMRSTFGPTMSFRGHPYGNGILTRHPIEATRTYDL-----SVRGREP 102 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + VE+ G ++ HL Q AQ L I + Sbjct: 103 RGCLRADVEVGGVRVHFFSAHLGLHWR------------ERRKQAAQLLSADILRDTALA 150 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 P V+ GDFN N + + + + + +D + Sbjct: 151 HPLVLVGDFNSLSNRSAVPRWLRRQLVDCA------HAARNEAPTFPSRFPLLRLDRVFV 204 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D ++ +R SDH P+ +D + Sbjct: 205 DSAF--RVVGCEVVHTPL--------ARRASDHLPLVVDLE 235 >gi|152986656|ref|YP_001346586.1| PKD domain-containing protein [Pseudomonas aeruginosa PA7] gi|150961814|gb|ABR83839.1| PKD domain containing protein [Pseudomonas aeruginosa PA7] Length = 780 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 49/329 (14%), Positives = 93/329 (28%), Gaps = 45/329 (13%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQYAKNLDADI 68 P V ++R+ S+N+ +G + + + ADI Sbjct: 446 PAQPVVEGRLRVASFNVLNYFNGDGKGGGFPTSRGASTAEEFQRQKAKIVAAILASKADI 505 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-------IHTAIAVRKKNV 121 V L E+ + + + + N I + R V Sbjct: 506 VGLMEIENDGYGEFAAIADLVDGLNAGLPQGQRYAFVNPNRTKLGSDEIAVGLIYRSDRV 565 Query: 122 RVL-QQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSF---CFLDSLEN 175 R + F + NR + + G+++ + HLKS C D Sbjct: 566 RTYGAAAVLDRTVNPEFDDSKNRPTLAQTFQEITGGERLTIAVNHLKSKGSACDGDPDTG 625 Query: 176 TYSPSCS-LLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 +C+ ++ AQ L DW+ ++I GD N N I Sbjct: 626 DGQGNCNLTRARAAQALVDWLASDPTAAKDPDYLIIGDLNSYAKEDPVN-----VIRAAG 680 Query: 233 SLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-- 289 ++ + + +D+ + + + + + I +E + Sbjct: 681 YTDLVARQAGAGKGYSYVFSGQSGYLDHALANASLARQVRGAVEWHINADEPRVLDYNLE 740 Query: 290 ---------------KRLSDHCPISIDYD 303 R SDH P+ I D Sbjct: 741 FKTPRQQDSLYSAEPYRASDHDPVVIGID 769 >gi|225023438|ref|ZP_03712630.1| hypothetical protein EIKCOROL_00296 [Eikenella corrodens ATCC 23834] gi|224943787|gb|EEG24996.1| hypothetical protein EIKCOROL_00296 [Eikenella corrodens ATCC 23834] Length = 255 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 86/304 (28%), Gaps = 73/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + + D++ LQE Sbjct: 1 MKIATWNVNSL----------------KVRLPHVSDWLIQHQPDVLCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + S + +A+ K + + R Sbjct: 35 LKLDQDQFPLSAFEMLGYRAVWSGQKTYNGVAILSKEEVQNVHT-----GLPALPNDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V+D++ + + S + Y Q L ++I + Sbjct: 90 RVIAATI----GGVRVVDVYCVNGEAVGSEKFAYKQ------QWFAALAEFIRSELAQYP 139 Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN L D +++T+ + + Sbjct: 140 ELVLLGDFNIAPADLDVYDPEKWQGKILCSAEERAWFQTLLDLGLTDSLRRLHPAEP-LY 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ++ ID+ + Q L D +R SDH P+ Sbjct: 199 TWWDYRMNMFRRKLGLRIDHILASQALLPRLAAAGV-------DTAPRALERPSDHAPVW 251 Query: 300 IDYD 303 +++ Sbjct: 252 AEFE 255 >gi|197105800|ref|YP_002131177.1| hypothetical protein PHZ_c2338 [Phenylobacterium zucineum HLK1] gi|196479220|gb|ACG78748.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 243 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 87/281 (30%), Gaps = 44/281 (15%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 R+V++N++ + D + + L+ DIV LQE+ Sbjct: 3 RIVTYNVHRCVGNDR-----------RLDVSRIAAVLAALNPDIVALQELDVGRRRTNYA 51 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + H+ + A+ L + PL G D R Sbjct: 52 DQAHEIAEQLEMACHFHAALQV-EEERYGDAILTAYPERLVKVGPLPGY-DRMRALEPRG 109 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD--WITQKKESL 202 A+ + VEI GK + +++ HL QA L W+ + Sbjct: 110 ALWVEVEIGGKPVQIINTHLGLIP-------------REQQIQAAHLAGTTWLD-HPDCR 155 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 P ++ GDFN ++T+ R + + + + + ID+ + Sbjct: 156 WPAILLGDFNATATS-----VVYRTLTARLKAARRLTRRRTATSTFPSPLPVLRIDHVFV 210 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + F + SDH P+ +D+D Sbjct: 211 SPGIEVHDVFAPFDPLTRV----------ASDHLPLVMDFD 241 >gi|89095707|ref|ZP_01168601.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus sp. NRRL B-14911] gi|89089453|gb|EAR68560.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus sp. NRRL B-14911] Length = 1532 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 41/330 (12%), Positives = 84/330 (25%), Gaps = 63/330 (19%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFL 71 K+ + S+N+ S + L + DI+ L Sbjct: 771 TTSLTKEEDKLTIASYNVENFS-----------PAVSADKIERLARAVVENLKRPDIIGL 819 Query: 72 QEMGSYN-----------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 E+ N A + + N +I Sbjct: 820 TEVQDNNGETNDGTTDATESFNVLAAKIKELGGPQYSYTDIAPVNNQDGGAPGGNIRVGF 879 Query: 115 AVRKKNVRVLQQS------------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 + V + + + P + + +R+ + E G+ Sbjct: 880 LYNAERVSLTEGAPKGTSTQSVGFENGKLTLNPGRIDPTNEAYKSSRKPLAAQFEFKGES 939 Query: 157 IWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK--KESLVPFVIAGD 210 + V+ H S L P S + A + ++ ++ V+ GD Sbjct: 940 VIVVANHFNSKGGDQPLFGKVQPPVLGSEVQRMKIANIVNGFVKDVKAEDPNANIVLLGD 999 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN K + + + + N +D+ ++ N Sbjct: 1000 FNDFEFSNP-----LKALKGQELTNMIEQVPAEERYSYSYQGNAQVLDHILVSNNLA--- 1051 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +I++ R SDH P+ I Sbjct: 1052 -AATAVDIVHINSGFMEEHGRASDHDPVLI 1080 >gi|253702348|ref|YP_003023537.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M21] gi|251777198|gb|ACT19779.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M21] Length = 249 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 38/282 (13%), Positives = 86/282 (30%), Gaps = 44/282 (15%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++N++ L + S + + ADIV LQE+ + Sbjct: 7 SFTIMTYNVHRLIGNDRHSSAP-----------RIAEVIHTYQADIVCLQELPGARVRPE 55 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + L + + V + L Q+ L ++ + Sbjct: 56 -VGGACQNLMHELALLESGGRHFFLERERWGKVVLSRFPMRLVQAG-GLHPQNRYRTVVP 113 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKKE 200 R + + +++ G+K+ V+++HL + Q + L +W++ + Sbjct: 114 RGVLWVEIDLFGQKLQVVNVHLGLTP-------------QERNYQVRVLTGPEWLS-HPD 159 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 P + GDFN + + +D + L + + D+ Sbjct: 160 CRPPVALCGDFNTLPSSTIHKQLKNALMDEQEKLKF-----GHNQFTFPSKLPMVRFDHI 214 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + K G SDH P+ + Sbjct: 215 FVSPDL---------VVENELIPRTKLTG-AASDHLPLVVRL 246 >gi|42779823|ref|NP_977070.1| sphingomyelinase C [Bacillus cereus ATCC 10987] gi|42735740|gb|AAS39678.1| sphingomyelinase C [Bacillus cereus ATCC 10987] Length = 378 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 101/314 (32%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 74 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVVILNEVF 127 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K V + Sbjct: 128 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 187 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 188 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 242 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + + GD N N +KT+ + Sbjct: 243 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 302 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 303 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 362 Query: 292 --LSDHCPISIDYD 303 SDH P++ Sbjct: 363 DDYSDHYPVAATIS 376 >gi|47568807|ref|ZP_00239501.1| phospholipase c precursor [Bacillus cereus G9241] gi|47554483|gb|EAL12840.1| phospholipase c precursor [Bacillus cereus G9241] Length = 378 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 99/314 (31%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 74 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 127 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K V + Sbjct: 128 DNSASDRLLGNLKQEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 187 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + V+ HL++ DS+ SP+ S+ + Sbjct: 188 QY-VFAKGCGPDNLSNKGFVYTKIKKNDHFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 242 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + + GD N N +KT+ + Sbjct: 243 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 302 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY V ++ E+ + + + Sbjct: 303 TWDATTNSIAKYNFPDSPAEYLDYIVASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 362 Query: 292 --LSDHCPISIDYD 303 SDH P+ Sbjct: 363 NDYSDHYPVEATIS 376 >gi|330833582|ref|YP_004402407.1| DNA nuclease [Streptococcus suis ST3] gi|329307805|gb|AEB82221.1| DNA nuclease [Streptococcus suis ST3] Length = 1039 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 44/328 (13%), Positives = 83/328 (25%), Gaps = 61/328 (18%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQEMGS 76 K+ + S+NI S +S + + + + + D++ L E+ Sbjct: 624 PNDDKLTIASYNIENFSA--------DSKSTSDAKVQRIAKSFVSDLHSPDVIGLIEVQD 675 Query: 77 YNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N + T+ + N +I Sbjct: 676 NNGATNDGTTDASKSAERLIAAIQAAGGPTY-TYVDIAPENNKDGGQEGGNIRVGFLYNS 734 Query: 119 KNVRVLQQSY-----------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 K V + + + + A R+ + G+K+ VL Sbjct: 735 KRVSLSDKPIGTATQAVAWENGELNLSLGRIDPTNPAWAAVRKTLAAEFVFKGEKVVVLA 794 Query: 162 IHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215 HL S + L S AQ + D+ + V+ GDFN Sbjct: 795 NHLNSKRGDNGLYGKIQPVSFKSEEKRHSLAQIITDFTKAGLTQNPNANIVMLGDFNDYE 854 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 ++ + S + N +D ++ N + Sbjct: 855 FTKTIE-----ILETGGMANLVSRHDASDRFSYFYNGNNQSLDNMLVSTNLLDRYAFDMV 909 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 R SDH P+ + D Sbjct: 910 HVNSA----FMEEHGRASDHDPLLVQLD 933 >gi|319792482|ref|YP_004154122.1| exodeoxyribonuclease iii xth [Variovorax paradoxus EPS] gi|315594945|gb|ADU36011.1| exodeoxyribonuclease III Xth [Variovorax paradoxus EPS] Length = 261 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 89/303 (29%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + + D++ LQE+ + Sbjct: 1 MKIATWNVNSLT----------------ARLQHVLDWLIANPVDVLCLQELKMTDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ F+ +R Sbjct: 41 ------KFPLEVLKSAGYEAAVFGQKTYNGVAILSLAPMRDVVKNI-----GGFTDEQSR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + VE + V++ + + S + Y + L+DW+ Q+ + Sbjct: 90 -VIAATVETPTGPLRVVNGYFVNGQAPGSDKFEYK------LKWLDALRDWLRQELVAHP 142 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN + D +K + L + + + Sbjct: 143 NLVLLGDFNITPEDRDSFDPVGLKETIHHTTEEREHFKALLGLG-LTDSFRMFEQPEKSY 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ++ ID+ ++ + + D + + ++ SDH P+ Sbjct: 202 SWWDYRMLGYQKNRGLRIDHILVSETLLPRVKGCII-------DRVPRKWEKPSDHAPVV 254 Query: 300 IDY 302 +D Sbjct: 255 LDL 257 >gi|158335038|ref|YP_001516210.1| 5'-nucleotidase/2',3'-cyclic phosphodiesterase [Acaryochloris marina MBIC11017] gi|158305279|gb|ABW26896.1| 5'-nucleotidase/2',3'-cyclic phosphodiesterase, putative [Acaryochloris marina MBIC11017] Length = 2593 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 84/313 (26%), Gaps = 38/313 (12%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY----- 77 ++ + S+N+ L +G + + + + DI+ LQE+ Sbjct: 1392 QLTVASYNVLNLDPNDGDGSTDVANGQFDRLAAQIVNNLQA--PDIIALQEIQDNSGSVD 1449 Query: 78 -------NAVAKVFP-----KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 + + F + + +I A V + Sbjct: 1450 DGTTAADQTLQMLVDAIAAAGGPTYEFRTIDPEDGAFGGQPGGNIRNAFLYNPDRVSIDD 1509 Query: 126 QSYPLLGAK--------DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 S LL + + + G+R + E NG+ + V++ H S + Sbjct: 1510 SSLQLLTPEVLAAAGASNPDAFEGSRTPLAANFEFNGQTVQVINNHFSSRFGSSPIFGAT 1569 Query: 178 SPSCS----LLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWKTIDPN 231 P QAQ + D++ + ++AGD N + D Sbjct: 1570 QPFIQAGEDAREAQAQAVNDFVDAQLADNPDANIIVAGDLNTFDTTNDLLEILPGVGDEQ 1629 Query: 232 DSLIRFPKE-KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD----IK 286 P+ + N +D+ + D I Sbjct: 1630 VLTSLVPQAVETDDAYTFIFDGNAQVLDHQFATNALAAGAEFDIVHVNNDFVRDDGQAIF 1689 Query: 287 SRGKRLSDHCPIS 299 SDH PI Sbjct: 1690 DDSIVASDHEPIV 1702 >gi|108761648|ref|YP_634768.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] gi|108465528|gb|ABF90713.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] Length = 287 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 46/319 (14%), Positives = 91/319 (28%), Gaps = 69/319 (21%) Query: 1 MIRKYVLALVFFLVPCTAS-----------------VAQKVRLVSWNINTLSEQEGVSLW 43 M + +L ++F + P + ++R++++NI + + Sbjct: 1 MSLRRLLPILFLMGPLACATGPGYLASTESVAAVRRAPGELRVMTFNIQSGA-------- 52 Query: 44 KNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103 + + D+V LQE+ + + A+ + + + H + Sbjct: 53 --------RGLERVAHVIRAAVPDVVALQEVDAKSTRARGLDQTEELSRLTGLKYRAHFR 104 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 IAV + YPL G + A R +V+++G+++ V H Sbjct: 105 TTDLFGGAYGIAVLSRFPLEALAQYPLPGPRG----AEPRTVAHAVVDVDGREVSVYLTH 160 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L F S + L Q P V+ GD N + Sbjct: 161 LVRRPFNSDTRVRQSAYVARLMAQ-------------DSRPKVLMGDLNDGPDSRST--- 204 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + + IDY + F+ Sbjct: 205 --RLLRRALHDVAAATGGTGGTYPLPLFLPTLRIDYVLACDAFT-FVASRVLRVD----- 256 Query: 284 DIKSRGKRLSDHCPISIDY 302 +SDH P+ D Sbjct: 257 --------VSDHYPVVADL 267 >gi|23097914|ref|NP_691380.1| hypothetical protein OB0459 [Oceanobacillus iheyensis HTE831] gi|22776138|dbj|BAC12415.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 402 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 45/329 (13%), Positives = 99/329 (30%), Gaps = 63/329 (19%) Query: 1 MIRKYVLALVFFLVPCTA-----SVAQK-------VRLVSWNINTLSEQEGVSLWKNSVK 48 M + YV+ L L+ A + A+ + ++S+N+ + + + Sbjct: 1 MKKTYVILLGLILMGSVAFGTISANAETTQEGDANLEVMSYNLRYDNPND--------PQ 52 Query: 49 RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108 +L++Y D DI+ QE + I + +N Sbjct: 53 TWEERLPVLQEYLLEKDPDIIGTQEALYNQVNDVDANLPGYD-------WIGLGREGGSN 105 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKD------SFSRAGNRRAVELLVEIN--GKKIWVL 160 AI ++ L+ + L S+ + R E K+ + + Sbjct: 106 GEFMAIYYKEDRFTPLEYDHYWLSDTPKEIGSTSWGNSIPRMVTWAKFEDKETNKQFYFV 165 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 + H S + + A+ + + + + +P V+ GDFN + + Sbjct: 166 NTHFDH------------ESENARVKSAELIAERLNDF-DEDIPVVLTGDFNTPLESESH 212 Query: 221 NDDFWKTIDPNDSLIRFPK-----EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + + K + N ID+ + + Sbjct: 213 QILTADDLFEDPWETAEEKINEDLGTFNGFNDATGGGADNKIDWVL----------TKGI 262 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D+ ++ G SDH P+ + ++ Sbjct: 263 DTKSVEIDNYQNNGYFPSDHYPVITELNY 291 >gi|229114626|ref|ZP_04244040.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3] gi|228668691|gb|EEL24119.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3] Length = 786 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 91/313 (29%), Gaps = 49/313 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 K+ + ++NI S + T L K DI+ ++EM N Sbjct: 487 DKLTVATYNIENFSAN--------KKETTDEKVKELAYSIKYNLKMPDIIGVEEMQDNNG 538 Query: 80 ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKN-- 120 + V + N +I Sbjct: 539 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPSNNQDGGAPGANIRVGFFYNPSRVK 598 Query: 121 ----VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 ++L ++ +G +++ + R+ + G+ + V+ HL S + Sbjct: 599 LATVPKLLDKNVVRIGDENALFDS-TRKPLAAEFTFQGQNVVVVANHLNSKLGDATPFGK 657 Query: 177 YS----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 S Q AQ + ++ QKK + P V+ GD N K ++ Sbjct: 658 VQPLVLKSEEKRIQLAQEVNYFVQGIQKKNANAPVVVLGDMNDFEFSKP-----LKALEG 712 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + N +D+ ++ N + + ++ +I Sbjct: 713 TILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTVVDPVHLNSNIMKEHG 768 Query: 291 RLSDHCPISIDYD 303 R+SDH P+ D Sbjct: 769 RVSDHDPVLAQID 781 >gi|254521169|ref|ZP_05133224.1| nuclease [Stenotrophomonas sp. SKA14] gi|219718760|gb|EED37285.1| nuclease [Stenotrophomonas sp. SKA14] Length = 481 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 98/326 (30%), Gaps = 36/326 (11%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEG--VSLWKNSVKRT----TSDYTLLRQ 59 VL L P +V + + ++N+ +G RT + T L Sbjct: 163 VLKLPELKRPAVPTVPGSLHVAAFNLENFFNGDGQGGGFPTLRGARTLDEHKAQVTKLVT 222 Query: 60 YAKNLDADIVFLQEMGS-----YNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTA 113 L AD+ L E+ + +A+A++ R ++ +N I Sbjct: 223 TVNALGADVAALMELENDGYGPQSAIAELVDALNRDRGAQGDWRFVDAGNGPGDNPIRVG 282 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKS-FCFLD 171 I R ++ + + L G +R + + G V+ H KS C Sbjct: 283 IIYRSTRLQPVGKPATLTGGPFVEH---SRVPLAQAFQGKRGAPFVVVANHFKSKGCRDA 339 Query: 172 SLENTYSPSCS-----LLSQQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDF 224 + + AQ L W+ V+ GDFN Sbjct: 340 AGADADQNDNQGCWNATRVTSAQQLHAWLQTDPTGTGAKDAVLLGDFNAYAMEDPI---- 395 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 +T+ F K + +D+ +++ K L + +E D Sbjct: 396 -RTLHDLGWQDAFKVAKVEHPYSYVYNGYTGRLDHALLNPGMAKRLRGAAEWHSNADEQD 454 Query: 285 IKSRG-------KRLSDHCPISIDYD 303 R SDH P+ + +D Sbjct: 455 ASGYQGRNVQGPWRSSDHDPLLLGFD 480 >gi|225862654|ref|YP_002748032.1| sphingomyelin phosphodiesterase C [Bacillus cereus 03BB102] gi|225787518|gb|ACO27735.1| sphingomyelin phosphodiesterase C [Bacillus cereus 03BB102] Length = 333 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 101/320 (31%), Gaps = 44/320 (13%) Query: 17 TASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 +++ A +++++ N+ LS L+ N + +D Y K + D+V Sbjct: 23 SSAQADTSTDQNNILKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVV 76 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKN 120 L E+ +A ++ T E S +A+ K Sbjct: 77 ILNEVFDNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKW 136 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 V + Y N+ V ++ N + + V+ HL++ DS+ SP+ Sbjct: 137 PIVEKVQYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA 192 Query: 181 CSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSL 234 S+ + Q + ++D+I + + + GD N N +KT+ + Sbjct: 193 -SVRTNQLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPS 251 Query: 235 IRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 N +DY + ++ E+ + + Sbjct: 252 YTGHTATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSW 311 Query: 290 KR------LSDHCPISIDYD 303 + SDH P+ Sbjct: 312 LKKYTYNDYSDHYPVEATIS 331 >gi|255530733|ref|YP_003091105.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] gi|255343717|gb|ACU03043.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] Length = 281 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 96/311 (30%), Gaps = 38/311 (12%) Query: 1 MIRKYVL--ALVFFLVPCTAS--VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 M K L A++ +V A A + ++S+NI ++++G + W N Sbjct: 1 MKIKIQLCMAMLLLVVTVKAQRKPADYINVMSYNIRYNNDKDGENAWPNRK-------DE 53 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 ++ + DADI+ +QE + A ++ + + S V Sbjct: 54 VKALVRFHDADILCVQEALALQA-DQLLENTNYEMAGVGRTDGKREGEFSAVYFDKTRFV 112 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLE 174 +K P +K + A R + + + N K+ V + H Sbjct: 113 KKDGGTFWLSDTPEKPSK-GWDAAIVRICTWVRLYDKWNKKEFMVFNTHYDHVG------ 165 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + A+ +K I + + +P V+ GD N D + Sbjct: 166 ------VQARIESAKLIKKKIQEIAPA-LPVVLTGDLNVTPETEAITTIKTFLTDSKEVS 218 Query: 235 IRFPKEKDSRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + N K K IDY ++ F + + S Sbjct: 219 EEPAYGPEGTFNGFKFNAPLKEKIDYIFIN---------RGFKVQKFAVLTDSKNQRYPS 269 Query: 294 DHCPISIDYDF 304 DH PI F Sbjct: 270 DHLPIMARLFF 280 >gi|262384583|ref|ZP_06077717.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262293876|gb|EEY81810.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 306 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 37/324 (11%), Positives = 80/324 (24%), Gaps = 43/324 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K+ F L A+ + + ++N+ + + + Y + Q Sbjct: 1 MKKFFYTFAFILCALMTLQAETMVVATYNLRNANGGDSTNGNG-----WGQRYPYIAQIV 55 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + DI QE + + S T K Sbjct: 56 QFHGFDIFGTQEGKYPQLQDLKQAMPGYDYIGVGRDDGKQAGEHSAIFYRTD-----KFE 110 Query: 122 RVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + + L D + R L +L Sbjct: 111 VLEHGDFWLSEITDRPNKGWDAVLPRICTWGEFRDKQTGFTFLFFNLHMDHVG------- 163 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 ++ A+ + I + +P ++ GDFN I + I Sbjct: 164 ---VQARAESAKLILKKIKEF-PKRLPAILTGDFNVDQTSESYKLLDGSGIMRDSYEIAD 219 Query: 238 PKEKDSRCNANKNLRNK--IPIDYFVMDQNAYKF---LIQESFS-------------EIL 279 + + + K ID+ + + ++ +++ Sbjct: 220 FRYAPNGTFNGFHPDRKTDSRIDHLFLTKEFEVKKYGILTDTYRSEVKESAQKEQNGNFP 279 Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303 K + SDH P+ I + Sbjct: 280 KEVSLSKYEARTPSDHFPVMIVVE 303 >gi|319779595|ref|YP_004130508.1| Exodeoxyribonuclease III [Taylorella equigenitalis MCE9] gi|317109619|gb|ADU92365.1| Exodeoxyribonuclease III [Taylorella equigenitalis MCE9] Length = 260 Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 94/302 (31%), Gaps = 68/302 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + + SWN+N+L+ + + + D D++ LQE Sbjct: 3 TLTVASWNVNSLN----------------VRLDQVLDWLREFDVDLLCLQE--------- 37 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + I S I + + +A+ K+ Sbjct: 38 -LKMESQKIDSSLFESIGYGIYALGQKTYNGVALISKHPITDLVENL------PNYEDPQ 90 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +R + + I+ K++ +++++ + L+S + +Y + L+ +I + + Sbjct: 91 KRLLAGTLSIDKKQVRIVNVYCPNGSDLESPKFSYK------MEWFSALRTYIEDQLNTN 144 Query: 203 VPFVIAGDFNRKINYLGNN-------------DDFWKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GDFN + ++ + + F + + N+ Sbjct: 145 ENLILTGDFNIAPKDEDIHPKYLGPILISPQERAHFEALLDLGLVDTF-RLFEQEQNSFS 203 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ + + K + D + +R SDH P+ Sbjct: 204 WWDYRQFGFKRNAGLRIDHILASSSLGKKCYKSWI-------DKKQRAHERPSDHAPVLA 256 Query: 301 DY 302 ++ Sbjct: 257 EF 258 >gi|126695849|ref|YP_001090735.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9301] gi|126542892|gb|ABO17134.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9301] Length = 281 Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 89/301 (29%), Gaps = 63/301 (20%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + +WN+N + + + + ++ DI+ LQE + Sbjct: 3 IATWNVN----------------SIRTRLSQIIDWINQVNPDILCLQETKVMDD------ 40 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + +S + +A+ K + G +S + Sbjct: 41 ----NFPVEPFEKLGYSLEIYGQKSYNGVAIISKIKPENVKKG-FNGCTESNQNSEIFLD 95 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + L+ + I ++++++ + LDS + Y L ++ ++++ Sbjct: 96 QKRLISADINGIKIINVYVPNGSSLDSSKFAYK------INWLNCLSSFLDEQEKKGELI 149 Query: 206 VIAGDFNRKINYLGNNDD-------FWKTIDPND-------SLIRFPKEKDSRCNANKNL 251 + GDFN + L +D I+ N LI + + Sbjct: 150 CLMGDFNVAPSNLDIHDPKKYEGGIMASEIERNALKNVLKKRLIDSFRIFEQNTGHWSWW 209 Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ + + L D R SDH P+ I+ Sbjct: 210 DYRNNGFELNKGWRIDHIYISKELTSKLKSCVI-------DCSPRGNLRPSDHAPVMIEL 262 Query: 303 D 303 + Sbjct: 263 N 263 >gi|222094431|ref|YP_002528490.1| sphingomyelinase c [Bacillus cereus Q1] gi|221238488|gb|ACM11198.1| sphingomyelinase C [Bacillus cereus Q1] Length = 338 Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 103/320 (32%), Gaps = 44/320 (13%) Query: 17 TASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 +++ A +++++ N+ LS L+ N + +D Y K + D+V Sbjct: 28 SSAQADTSTDQNNILKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVV 81 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKN 120 L E+ +A ++ T E S+ +A+ K Sbjct: 82 ILNEVFDNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKW 141 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 V + Y N+ V ++ N + + V+ HL++ DS+ SP+ Sbjct: 142 PIVEKVQYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA 197 Query: 181 CSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSL 234 S+ + Q + ++D+I + + + GD N N +KT+ + Sbjct: 198 -SVRTNQLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPS 256 Query: 235 IRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 N +DY + ++ E+ + + Sbjct: 257 YTGHTATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFVENKVLQPKSPQWTVTSW 316 Query: 290 KR------LSDHCPISIDYD 303 + SDH P++ Sbjct: 317 LKKYTYDDYSDHYPVAATIS 336 >gi|330470654|ref|YP_004408397.1| 5'-nucleotidase domain-containing protein [Verrucosispora maris AB-18-032] gi|328813625|gb|AEB47797.1| 5'-Nucleotidase domain protein [Verrucosispora maris AB-18-032] Length = 1369 Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 83/312 (26%), Gaps = 39/312 (12%) Query: 21 AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--- 76 +R+ S+N+ N G + + + LDAD+V L+E+ + Sbjct: 451 GGDLRVASFNVLNYFVHFGGDARGAANEAALAKQEAKIVSAISALDADVVALEEIENSVR 510 Query: 77 ------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI--AVRKKNVRVLQQSY 128 A+ ++ T + I A+ K Q Sbjct: 511 FSSSDPQRALKRLVAALNTADGAGTWDYVRTPTELPGAAQQDFITTAIIFK-PAKAQPKG 569 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS-----L 183 D R + V+ H KS S +N S Sbjct: 570 ASRSVNDESVWFNAREPIAQTFTAGPLDFVVVANHFKSKSGAGSGDNADSGDGQGGWNGD 629 Query: 184 LSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 +QA L ++ Q K ++ GDFN + K + Sbjct: 630 RVRQATALATFVDQVKADSDTDNVLLLGDFNAYTQEDPMQVLYGK---------DYRNLN 680 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------KR 291 ++ + +D+ + + + +I E R Sbjct: 681 NTGKTSYVFNGESGSLDHALASPSLADRVTGVDVWQINAVESYAFQYDGLAAFYAPDPYR 740 Query: 292 LSDHCPISIDYD 303 SDH P+ + + Sbjct: 741 ASDHNPLVVGIN 752 >gi|294508721|ref|YP_003572780.1| Endonuclease/exonuclease/phosphatase family protein [Salinibacter ruber M8] gi|294345050|emb|CBH25828.1| Endonuclease/exonuclease/phosphatase family protein [Salinibacter ruber M8] Length = 358 Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 90/310 (29%), Gaps = 47/310 (15%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-- 75 + + + ++NI LS ++ Y + DIV LQE+ Sbjct: 48 TTRPDTLTVTTYNIGYLSGMRNNEPVVRPDSLFHANMDQAAGYLRAAAPDIVALQEIDFG 107 Query: 76 -----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI-------AVRKKNVRV 123 + + + + + AV + Sbjct: 108 GARAAHVHQLDTLAARLGYPGAAQAVNWDERYLPFPYGRPAVHFGRTLSGQAVLSRFPVR 167 Query: 124 LQQSYPLLGAKDSFSRAG---NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 L SF R +R A +V+++G+ + V+++HL++F Sbjct: 168 RHVRRTLPRPPQSFFRDAFYLDRLAQVGVVDVDGRPLAVINVHLEAFDVG---------- 217 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTIDPNDSL 234 QA+ + D + + +P ++ GDFN ++ D + I L Sbjct: 218 --TRETQARVVNDLYRRLADRGIPTLLLGDFNSSLSSGEEGGQAGAEDATMQHILAGTDL 275 Query: 235 IRFPKEKDSRCNANKNL--RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID+ + ++ + + + Sbjct: 276 RSAVNTALADTASATYPADAPARTIDHILYSPQFFEAVDTKRWCGRPAP----------P 325 Query: 293 SDHCPISIDY 302 SDHC ++ Sbjct: 326 SDHCAVTAAL 335 >gi|37523646|ref|NP_927023.1| hypothetical protein gll4077 [Gloeobacter violaceus PCC 7421] gi|35214651|dbj|BAC92018.1| gll4077 [Gloeobacter violaceus PCC 7421] Length = 606 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 41/323 (12%), Positives = 95/323 (29%), Gaps = 47/323 (14%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 A V ++++ S+N+ G N + + K +DAD+V L E Sbjct: 291 TAAPAPVGGRLKVASFNVLNYFTTLGSRGAANDKE-FERQQGKVVAALKAIDADVVGLIE 349 Query: 74 MGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSN-NDIHTAIAVRKKNVRVLQQSYPL 130 + + A+ + + ++ R + +DI I + + V+ P+ Sbjct: 350 IQNNGLIALDNLTAALNKAYGRTVFDVVIPPLRGTGTDDIQVGIIYKPERVK------PV 403 Query: 131 LGAKDSFSRAGNRRAVELLVEI----NGKKIWVLDIHLKS-FCFLDSLENTYSPSCS--- 182 ++ +R + + V+ H KS D + + Sbjct: 404 GPSRSDPEPIFDRPPLAQTFQARRSGPRSTFTVVVNHFKSKGSCPDPGPDADADKGQGCW 463 Query: 183 --LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 QA+ L ++ + ++ GD N K + + + Sbjct: 464 NLRRVAQARKLLAFVKTLNDPD--VLVVGDLNAYGGEDPI-----KALGAGGLVSLNLRI 516 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------- 289 + + +D+ + + K + + + +E + Sbjct: 517 PAAERYSYVFEGQSGYLDHALATPSLDKQVTGITEWHVNSDEPPVIDYNTEYSRRNPAAK 576 Query: 290 ---------KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 577 KDDRYEPTPYRSSDHDPVVVGLE 599 >gi|305666984|ref|YP_003863271.1| putative secreted protein [Maribacter sp. HTCC2170] gi|88709217|gb|EAR01451.1| probable secreted protein [Maribacter sp. HTCC2170] Length = 258 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 94/305 (30%), Gaps = 50/305 (16%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M K L +V + + S A +R++S+NI + + + + Sbjct: 1 MKLKLFLFIVICIGFKSFSQADTLRVMSFNILHGATTKNDF-----------NLDTIAGV 49 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + D+V LQE+ AK + T F + + ++ + AV Sbjct: 50 INKYNPDLVALQEVDFKTNRAKKYDLPTEIGFRTKMASLF-ARAMYYDGGEYGEAVLSNL 108 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSP 179 + ++ L + R A+ V+ NG I + HL + Sbjct: 109 TFIGSENISLPHLP----TSEPRAALLTRVKTRNGNIIQFVGTHL-----------DHLR 153 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + QA+ + + + + P ++ GD N N P+ Sbjct: 154 DDTDRLMQAKAINEALG---STKYPTLLVGDLNDGPNSETIRILSENFHK--------PQ 202 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ++ K+ +D+ ++ +I Y SDHC + Sbjct: 203 LQAAKKKTWPADEPKVCLDHILLTNPKKWKVIDYEVICENY-----------ASDHCIVV 251 Query: 300 IDYDF 304 F Sbjct: 252 ATLVF 256 >gi|284033951|ref|YP_003383882.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283813244|gb|ADB35083.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 293 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 47/320 (14%), Positives = 86/320 (26%), Gaps = 55/320 (17%) Query: 1 MIRKY--VLALVFFLVPCTASVAQ------KVRLVSWNINTLSEQEGVSLWKNSVKRTTS 52 M+RK ++A + L T +VA +R+ ++NI+ + + V Sbjct: 1 MVRKLAVLVAALTLLTGVTPAVADGNAPPVPLRVATYNIHAGAGHDNVF----------- 49 Query: 53 DYTLLRQYAKNLDADIVFLQEMG----SYNAVAKVFPKNTWCIFYSTERLINHSK---RD 105 D + LDAD++ LQE+ + + + + + R Sbjct: 50 DLDRTETTLRALDADVIGLQEVDVHWSERSQWRDLVSELAQRLGMRAGFAPIYDFDPLRA 109 Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN---RRAVELLVEINGKKIWVLDI 162 +AV K + Q++ L AG +E +V+ G ++ Sbjct: 110 GEPRRQYGLAVLSKAPILEVQNHNLTRLSTQDPGAGPTPMPGFLEAVVQAKGARLHFYVT 169 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL Y SL + + ++ GD N + Sbjct: 170 HL-----------DYRADPSLRRTEVDETLKILADDPAGANQVLV-GDLNAEPQAAE--- 214 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + IDY + + Sbjct: 215 -LARLWPAMTDAWTAAPITTGNPLTYPAATPVKRIDYITVSDGVGVLRAEVPA------- 266 Query: 283 DDIKSRGKRLSDHCPISIDY 302 SDH P+ D Sbjct: 267 ---SPALLAASDHRPVVADL 283 >gi|58583572|ref|YP_202588.1| hypothetical protein XOO3949 [Xanthomonas oryzae pv. oryzae KACC10331] gi|58428166|gb|AAW77203.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 342 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 49/301 (16%), Positives = 96/301 (31%), Gaps = 33/301 (10%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 +LAL L AS +R++S+N+ V + + KR T T + K Sbjct: 71 ILALCITLPAFAASAPAPLRVMSFNVR-------VPMDSDGDKRWTVRRTSMVALIKQAH 123 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 D+ QE+ A + F R + A++V + Sbjct: 124 PDVFGTQELVQEQAQYLASHLPAYRWFGKGRRADGSDEHMGVFYDSNALSVIES-GDFWL 182 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 P + S++ R L E + ++ ++L+ HL + Sbjct: 183 SEIPEIPGSSSWNTDLPRMVTWALFERRNDKRRFYLLNTHLPH----------RDQDEAA 232 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 A+ + I + +P V+ GDFN + + + + Sbjct: 233 REHVARVILSRIAT-LPADIPVVVTGDFNSDPDQGTYR--TLTAVLGDARAHVAKPQGPE 289 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + N + ID+ + + ++ D +S G SDH P+ ++ Sbjct: 290 KTFQNFTTQPTRRIDWILFRG----------LTPTRFSTLDARSGGILPSDHYPVLAAFE 339 Query: 304 F 304 + Sbjct: 340 W 340 >gi|82703533|ref|YP_413099.1| exodeoxyribonuclease III [Nitrosospira multiformis ATCC 25196] gi|82411598|gb|ABB75707.1| Exodeoxyribonuclease III [Nitrosospira multiformis ATCC 25196] Length = 277 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 36/302 (11%), Positives = 82/302 (27%), Gaps = 72/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + ++ D++ LQE Sbjct: 1 MKIATWNVNSL----------------KVRLPQVLEWLTLNQPDVLCLQET--------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + S + +A+ + F R Sbjct: 36 -KLQDEHFPVSEIAAAGYQTIYSGQKTYNGVALLSRQPVSEV-----FTGMPGFEDPQKR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V+ I++ + + S + Y + L++W+ + Sbjct: 90 LLGGVH-----DDVCVVCIYVPNGEHVTSEKYQYK------LRWLAALREWLREMLSRHR 138 Query: 204 PFVIAGDFNRKINYLGNND-------DFWKTIDPNDS-------LIRFPKEKDSRCNANK 249 V+ GDFN +D + ++ I + D + Sbjct: 139 KLVVLGDFNIAPEDCDVHDSKLWEGKVLFSELERAAFREVLDLGFIDSFRLFDQPEKSFT 198 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ + D R +R SDH P+ + Sbjct: 199 WWDYRMMAFRRNMGLRIDHILLSRELAGMCTACVI-------DKATRRLERPSDHAPVIV 251 Query: 301 DY 302 + Sbjct: 252 EL 253 >gi|325105102|ref|YP_004274756.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145] gi|324973950|gb|ADY52934.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145] Length = 278 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 53/323 (16%), Positives = 87/323 (26%), Gaps = 68/323 (21%) Query: 2 IRKYVLALVFFLVPCTASVAQ--------------------KVRLVSWNINTLSEQEGVS 41 ++ + + LV ++ +++S+NI+ Sbjct: 1 MKNLKILIFVLLVSMSSISCGKSAAEPEKDNKPPVEEKSGPTFKVMSYNIH--------I 52 Query: 42 LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH 101 S + D + Q D+V L E+ + + + T Sbjct: 53 GNPPSKDASYRDLEAIAQVINIQKPDLVALSEVDNKTKRSGTTVDQAKELGRLTGMYYYF 112 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 +K AV K + Y L F R +LVE G K + Sbjct: 113 TKAMDYQGGEYGDAVLSKFPIAESKRYELPVTGTGF---EPRSLALILVEKEGHKFYFGS 169 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 HL D+ QA L D I P V+AGD+N N Sbjct: 170 THLDHTSAEDN-----------RVLQANTLVDIIKSL---NYPLVLAGDWNALPTSQTIN 215 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRC-NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 K ++P + C + IDY + + Y Sbjct: 216 -ILKKALNP----------TCTDCPYTFPMNKPDRTIDYIMYKPAEKFKVKSLKVVNETY 264 Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303 SDH P+ +D + Sbjct: 265 -----------ASDHLPLVVDLE 276 >gi|298373624|ref|ZP_06983613.1| endonuclease/Exonuclease/phosphatase family protein [Bacteroidetes oral taxon 274 str. F0058] gi|298274676|gb|EFI16228.1| endonuclease/Exonuclease/phosphatase family protein [Bacteroidetes oral taxon 274 str. F0058] Length = 339 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 39/347 (11%), Positives = 94/347 (27%), Gaps = 57/347 (16%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV-----------KRT 50 +RK L ++ L ++++S+N+ L + SL+ +S +R Sbjct: 1 MRKIYLTILSILFTVNLFSQDTLKIMSYNVENLFDTRDDSLYNDSEYLRGGLRGWTYERY 60 Query: 51 TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 + + ++ L E+ +YN + ++ K + I H + Sbjct: 61 RHKLYNIAKVVAAAGEWNPPFLIGLCEIENYNVLYELTNKTGLQ---NIGYKIIHYESPD 117 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLK 165 + + + + + ++ S R + + NG + V H Sbjct: 118 ARGVDVGLLYLPNKFKPINSRPIRVQLPNTQST--TRDILYASGTLTNGDTLHVFVNHFP 175 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDD 223 S + + A++L++ + +I GDFN + Sbjct: 176 SRLGGELESEPRRLAV------ARYLREAVDSLFGINDKAKVLILGDFNDMPDNNSIVKV 229 Query: 224 FWKTIDPNDSLIRFPK--------EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + + + + +D ++ + + Sbjct: 230 LGANPFSAGTTQVVDRKLYNITYKFHKEGRGTYRFQQQWNMLDQIIVSGALLQGGGKTEI 289 Query: 276 SE--------------------ILYNEDDIKSRGKRLSDHCPISIDY 302 E + SDH P+ +D Sbjct: 290 LEKSTRIFSPEWLLEDDKPTGKRPFRTYIGMRYNGGFSDHLPVLVDI 336 >gi|270307561|ref|YP_003329619.1| endonuclease/exonuclease/phosphatase family [Dehalococcoides sp. VS] gi|270153453|gb|ACZ61291.1| endonuclease/exonuclease/phosphatase family [Dehalococcoides sp. VS] Length = 639 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 88/288 (30%), Gaps = 54/288 (18%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + +R++++N++ +G D L + +N AD+V LQE+ Sbjct: 403 PAAPQFSGTLRIMTYNLHNGFNTQG-----------RLDMEALVRVIENSGADVVALQEI 451 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 ++ W +RL +S + + A+ K + + L Sbjct: 452 SRGWVISGRVDMLEWL----AQRLNMYSAFGATAGEYWGNAILSKYPILDTHNVSLESDG 507 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R + ++++ G+ +++ HL + QA L D+ Sbjct: 508 LPIK----RGYLNAVLDLGGRYLYLAATHLHHVPEEGD----------VRLIQAGELADF 553 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + VI GDFN + N + E + + Sbjct: 554 WDNAPST----VILGDFNAEPNSAEIGLLRQAGLSD-------SLEGQTSVLTYHSADLY 602 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IDY + + +SF+ SDH + D Sbjct: 603 QRIDYIWASPDI---VYVDSFTIFSL-----------ASDHLAVIADI 636 >gi|116051946|ref|YP_789211.1| extracellular nuclease [Pseudomonas aeruginosa UCBPP-PA14] gi|115587167|gb|ABJ13182.1| predicted extracellular nuclease [Pseudomonas aeruginosa UCBPP-PA14] Length = 780 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 99/329 (30%), Gaps = 45/329 (13%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWK------NSVKRTTSDYTLLRQYAKNLDADI 68 P +V ++R+ S+N+ +G N+ + + ADI Sbjct: 446 PAQPAVEGRLRVASFNVLNYFNGDGKGGGFPTSRGANTAEEFQRQKAKIVAAILASKADI 505 Query: 69 VFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRD--SNNDIHTAIAVRKKNV 121 V L E+ + +A+A + + + R +++I + R V Sbjct: 506 VGLMEIENDGYGEFSAIADLVNGLNASLPQGQRYAFVNPNRAKLGSDEIAVGLIYRGDKV 565 Query: 122 -RVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSF---CFLDSLEN 175 + F NR + + G+++ + HLKS C D Sbjct: 566 RIYRSAAVLDSSVNPEFDDTRNRPTLAQTFQEINGGERLTIAVNHLKSKGSACDGDPDTG 625 Query: 176 TYSPSCS-LLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 +C+ ++ AQ L DW+ +I GD N N I Sbjct: 626 DGQGNCNLTRARAAQALVDWLAGDPTGAKEPDRLIIGDLNSYAKEDPVN-----VIRGAG 680 Query: 233 SLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-- 289 ++ + + +D+ + + + + + I +E + Sbjct: 681 YTDLVARQAGAGKGYSYVFSGQSGYLDHALANASLARQVRGAVEWHINADEPRVLDYNVE 740 Query: 290 ---------------KRLSDHCPISIDYD 303 R SDH P+ I D Sbjct: 741 FKTPRQQDSLYNAEPYRASDHDPVVIGID 769 >gi|256426118|ref|YP_003126771.1| endonuclease/exonuclease/phosphatase [Chitinophaga pinensis DSM 2588] gi|256041026|gb|ACU64570.1| Endonuclease/exonuclease/phosphatase [Chitinophaga pinensis DSM 2588] Length = 308 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 39/328 (11%), Positives = 89/328 (27%), Gaps = 45/328 (13%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M RK +L VF ++ A +AQK+ + ++N+ + +E + +R + Sbjct: 1 MKRKMLLMAVFTVLSY-AVMAQKMTVATYNMRNDNNKEDAAHGNGWKQRYPV----IASM 55 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + DI QE + + + S + + K Sbjct: 56 IRFHGFDIFGTQECMHHQLENLKDSLPGYAYIGIGRDDGKEAGEYSAIF-YNGV----KF 110 Query: 121 VRVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + + + D + R + +L Sbjct: 111 KLLEHGDFWMAEETDKPKKGWDAVLPRICTWGKFKEIKTGFTFYFFNLHMDHVG------ 164 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 ++ A+ + D + + +P ++ GDFN + + Sbjct: 165 ----VKARAESAKLVMDKVRKMAG-NIPTILTGDFNVDQQSESYTLINTSGLLKDAYETT 219 Query: 237 FPKEKDSRCNANKNLRNK--IPIDYFVMDQNAYKFL------------------IQESFS 276 + ++ N +K ID+ + + + S + Sbjct: 220 AIRYAENGTFNAFNPNSKTDSRIDHIFLTRQFRVEKYGILTDTYRGPVVTENGDDKVSSA 279 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYDF 304 + K + SDH P+ + Sbjct: 280 DFPKEVSLKKYVARVPSDHFPVMAIITW 307 >gi|313158021|gb|EFR57427.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 279 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 92/306 (30%), Gaps = 39/306 (12%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M R ++ L+ + A + ++++N+ + ++G + W+ +R + Sbjct: 1 MKR--LIYLLAAVAFTACGSATSLSVMTFNMRYDNPEDGQNNWRFRRER-------VAGV 51 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 K + D++ QE+ S + S + Sbjct: 52 IKAQEVDVLGTQELLSNQFNDLSGLLTGYQGVGVGRLDGVESGEYCAVFFRKDRFTLLDS 111 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSP 179 P + + A R A +++ +G++ + +D HL + Sbjct: 112 GTFWLSETPEVVGSLGWDGACERIATWVVLRDRDGREFFFIDTHL-----DHVGQVARDE 166 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 SLL ++ + L P ++ GDFN + + + I + Sbjct: 167 GVSLLMKRIETL--------SGGRPVILTGDFNSEPGSSVVAHVQKDGVLRDAKAIAAQR 218 Query: 240 EKDSRCNANKNLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + + + +DY + + + Y G +SD Sbjct: 219 SGTD--WSFSDFGQIPEAERPLLDYIFVSGD---------IEAVRYEVLPDTFDGGYVSD 267 Query: 295 HCPISI 300 H P+ Sbjct: 268 HAPVMA 273 >gi|301309194|ref|ZP_07215138.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] gi|300832876|gb|EFK63502.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] Length = 306 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 38/324 (11%), Positives = 80/324 (24%), Gaps = 43/324 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +RK+ F L A+ + + ++N+ + + + Y + Q Sbjct: 1 MRKFFYTFAFILCALMTLQAETMVVATYNLRNANGSDSTNGNG-----WGQRYPYIAQIV 55 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + DI QE + + S T K Sbjct: 56 QFHGFDIFGTQEGKYPQLQDLRQAMPGYDYIGVGRDDGKQAGEHSAIFYRTD-----KFE 110 Query: 122 RVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + + L D + R L +L Sbjct: 111 VLEHGDFWLSEITDRPNKGWDAVLPRICTWGEFRDKQTGFTFLFFNLHMDHVG------- 163 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 ++ A+ + I + +P ++ GDFN I + I Sbjct: 164 ---VQARAESAKLILKKIKEF-PKRLPAILTGDFNVDQTSESYKLLDGSGIMRDSYEIAD 219 Query: 238 PKEKDSRCNANKNLRNK--IPIDYFVMDQNAYKF---LIQESFS-------------EIL 279 + + + K ID+ + + ++ +++ Sbjct: 220 FRYAPNGTFNGFHPDRKTDSRIDHLFLTKEFEVKKYGILTDTYRSEVKESAQKEQNGNFP 279 Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303 K + SDH P+ I + Sbjct: 280 KEVSLSKYEARTPSDHFPVMIVVE 303 >gi|149279450|ref|ZP_01885580.1| hypothetical protein PBAL39_16661 [Pedobacter sp. BAL39] gi|149229743|gb|EDM35132.1| hypothetical protein PBAL39_16661 [Pedobacter sp. BAL39] Length = 304 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 42/326 (12%), Positives = 93/326 (28%), Gaps = 48/326 (14%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 MIR ++L F L+ S AQ++ + ++N+ + + + + ++ Sbjct: 1 MIRYFLLG--FALLFTQNSFAQQINIATYNVRYKNSGDEKNGNG-----WSQRMPVVTDI 53 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + D DI QE+ + + + + K Sbjct: 54 IQFHDFDIFGAQEILQQQLNDLDSKLTGYGHVGVGRDDGKRAGEHAMIFYK-----KDKF 108 Query: 121 VRVLQQSYPLLGAKD----SFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLE 174 + ++ L +D + A R + +G+K + + H F Sbjct: 109 KLLDSGNFWLSKQEDVPNKGWDAALPRICSWGAFQHLASGRKFYFFNTH-----FDHVGV 163 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 S L+ ++ + + P ++ GDFN + + Sbjct: 164 VARRESAKLILRKIRAIA--------GDTPTILTGDFNVDQTNEIYGILTGQQLADAFET 215 Query: 235 IRFPKEKDSRCNAN-KNLRNKIPIDYFVMDQNAYKFLIQ----------------ESFSE 277 F + N N + K ID+ ++ ++ + Sbjct: 216 TAFRYATNGTINHFDINTKTKSRIDHILLSKSIKVKRYGVLTDTYRSAGKENAEVSTSGN 275 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 + + SDH P+ D Sbjct: 276 FPKEVSLQRYEARLPSDHFPVMAVID 301 >gi|84625383|ref|YP_452755.1| hypothetical protein XOO_3726 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84369323|dbj|BAE70481.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 319 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 49/301 (16%), Positives = 96/301 (31%), Gaps = 33/301 (10%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 +LAL L AS +R++S+N+ V + + KR T T + K Sbjct: 48 ILALCITLPAFAASAPAPLRVMSFNVR-------VPMDSDGDKRWTVRRTSMVALIKQAH 100 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 D+ QE+ A + F R + A++V + Sbjct: 101 PDVFGTQELVQEQAQYLASHLPAYRWFGKGRRADGSDEHMGVFYDSNALSVIES-GDFWL 159 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 P + S++ R L E + ++ ++L+ HL + Sbjct: 160 SETPEIPGSSSWNTDLPRMVTWALFERRNDKRRFYLLNTHLPH----------RDQDEAA 209 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 A+ + I + +P V+ GDFN + + + + Sbjct: 210 REHVARVILSRIAT-LPADIPVVVTGDFNSDPDQGTYR--TLTAVLGDARAHVAKPQGPE 266 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + N + ID+ + + ++ D +S G SDH P+ ++ Sbjct: 267 KTFQNFTTQPTRRIDWILFRG----------LTPTRFSTLDARSGGILPSDHYPVLAAFE 316 Query: 304 F 304 + Sbjct: 317 W 317 >gi|224536510|ref|ZP_03677049.1| hypothetical protein BACCELL_01385 [Bacteroides cellulosilyticus DSM 14838] gi|224521867|gb|EEF90972.1| hypothetical protein BACCELL_01385 [Bacteroides cellulosilyticus DSM 14838] Length = 296 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 38/299 (12%), Positives = 84/299 (28%), Gaps = 33/299 (11%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 L L+ +A Q + ++++N+ + + + WK + Q Sbjct: 23 LMLLGSCKNQSAQNEQPLEVMTFNVRLDAPSDSANNWKYRK-------DNVCQMITYYQP 75 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D++ +QE+ + + ++ + Sbjct: 76 DLLGMQEVRHNQMEDLKQGLPQYTALGVGRDDGKEAGEYCPIFFNSHRFTLVEYGNFSLS 135 Query: 127 SYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 P + + NR ++ + NGKK+ + HL + E L+ Sbjct: 136 EQPETIGIKGWDASYNRITTWAILQEKSNGKKLVFFNTHL-----DNDGEIARKEGVQLI 190 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + + + +P +I GDFN + ++ + Sbjct: 191 LNKIKEIA--------PHMPAIITGDFNCTPDETPLQTLEKGGMENASKVAAITYGPSWS 242 Query: 245 CNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + L + +DY + Y + LSDH P+ +D Sbjct: 243 FHDFGRLPLEERVLLDYVFVSGGM---------KTNRYRVIQDRPENGFLSDHDPVLVD 292 >gi|288801368|ref|ZP_06406822.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp. oral taxon 299 str. F0039] gi|288331751|gb|EFC70235.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp. oral taxon 299 str. F0039] Length = 310 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 38/323 (11%), Positives = 90/323 (27%), Gaps = 36/323 (11%) Query: 2 IRKYV--LALVFFLVPC-TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 +RK +AL L+ + AQ + + S+NI + + + + ++ Sbjct: 1 MRKITKRIALSLLLLSTGVITYAQSLFVGSYNIRYKNNNDAKAGFV-----WQKRCQVIC 55 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 K + DI QE+ + T+ + + + + Sbjct: 56 DQLKFENPDIFGAQEVLVEQLHDMLQQLPTYNYIGVGRDDGKEAGEYAAIFYNKNEIEKL 115 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K+ P + + A R + +L + Sbjct: 116 KDGHFWLAENPN-QPQLGWDAACVRICTWGKFKQKTTGFTFYFFNLHTDHVG-------- 166 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + A+ + I + P ++ GDFN + + + I Sbjct: 167 --VIARREAAKLVIRKIKEIAGQNAPVILTGDFNVDQKDETYDLFVNSGLLNDSYTIAKN 224 Query: 239 KEKDSRCNANKNLRNK--IPIDYFVMDQNAYKF---LIQESFSEILYNEDDIKSRG---- 289 + ++ + + K ID+ + + ++ S+ + K + Sbjct: 225 RFAENGTFNDFDSDTKTDSRIDHIFLTKPFEVQRYGVLTNSYWTEDKTSEARKGKDAPQQ 284 Query: 290 --------KRLSDHCPISIDYDF 304 + SDH P+ + Sbjct: 285 INLKHFTRRNPSDHYPVFAKIKW 307 >gi|264679401|ref|YP_003279308.1| exodeoxyribonuclease III Xth [Comamonas testosteroni CNB-2] gi|262209914|gb|ACY34012.1| exodeoxyribonuclease III Xth [Comamonas testosteroni CNB-2] Length = 260 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 88/305 (28%), Gaps = 70/305 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++ +WN+N+LS + + D + LQE+ + Sbjct: 2 TMKIATWNVNSLS----------------VRLPQVLDWLAANPVDALGLQELKLTDD--- 42 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + +A ++ + G D +R Sbjct: 43 -------KFPHMAFEEAGYKAVSHGQKTYNGVAWITRDTGRDVVRN-IPGLDDEQAR--- 91 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + ++ +I +++ + + S + Y + Q L DWI + Sbjct: 92 --IIATTIDSPNGEIRLINGYFVNGQEPGSEKFAYK------MRWLQALHDWIQNQMTLH 143 Query: 203 VPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247 V+ GDFN + D ++ + F + + + Sbjct: 144 PRLVLVGDFNVAPEDRDSYDPVGLKDTIHHTVEERDHFQRLLQLGLSDAF-RMFEQPEKS 202 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ++ ID+ ++ + + S D + K+ SDH P+ Sbjct: 203 YSWWDYRMLGFQKNRGLRIDHILVSEALKSKVSACSV-------DRAPRKNKQPSDHAPV 255 Query: 299 SIDYD 303 + D Sbjct: 256 VVTLD 260 >gi|218681503|ref|ZP_03529390.1| hypothetical protein RetlC8_22861 [Rhizobium etli CIAT 894] Length = 242 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 38/286 (13%), Positives = 84/286 (29%), Gaps = 51/286 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + ++L+++N+++ + D + +ADIV LQE+ + Sbjct: 4 KSIKLLTYNVHSCIGSDR-----------KLDPGRIASVIAEAEADIVALQEVDV--SRR 50 Query: 82 KVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + S ++ H S + A+ ++ PL Sbjct: 51 RTGGVDQAHAIASPLKMQAHFHPALSIAEEQYGDAIITALPTGAVKAGPLPSIG------ 104 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD--WITQK 198 R A+ + V + +K+ V++ HL +Q L + W+ Sbjct: 105 EQRGALSVEVLVGDRKLLVVNTHLGLRG-------------RERIRQMTTLLNAGWLHGS 151 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 +P ++ GDFN +++ + + ID Sbjct: 152 VGESLPAILCGDFNAIPASAT-YRLAARSLKDAQLA-----GSTAARATFPARYPLMRID 205 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + + SDH P+ + F Sbjct: 206 HIFVTDDLVVKRSAVM----------ESRLTRVASDHLPLLAEIGF 241 >gi|260061391|ref|YP_003194471.1| hypothetical protein RB2501_07320 [Robiginitalea biformata HTCC2501] gi|88785523|gb|EAR16692.1| hypothetical protein RB2501_07320 [Robiginitalea biformata HTCC2501] Length = 255 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 76/281 (27%), Gaps = 31/281 (11%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 +S+NI + +G W L D+V QE + Sbjct: 1 MSYNIRYDNPGDGRDSWDQRK-------EFLIAQIAYHAPDVVGTQEGLLHQLRDMEVAL 53 Query: 87 NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146 + F + + +T + P + +K + A NR Sbjct: 54 EGYAFFGKGRDQGDDQGEHTAVFYNTGQLELLEEETFWLSETPEVPSK-GWDAALNRVCT 112 Query: 147 ELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 +G++ ++ + H F E S SL+ +Q + + +P Sbjct: 113 YGRFRHRPSGREFYLFNTH-----FDHVGEAARRESVSLILRQMARVNA-------AGLP 160 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-KNLRNKIPIDYFVMD 263 V+ GD N + + D D + N IDY Sbjct: 161 VVLMGDLNLEPDSAPIRQLANSMDDAFDQAGQAAYGPPGTFNGFDCTQPVTRRIDYIFTG 220 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 F+ + + SDH P+ +F Sbjct: 221 PG--------DFTVRSHAILSEFTGLGFPSDHFPVLARLEF 253 >gi|167850682|ref|ZP_02476190.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei B7210] Length = 624 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 94/315 (29%), Gaps = 47/315 (14%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ N + + + R +Y + K LDAD++ L E+ Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIE 353 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + + S R + I A+ + V+ P+ A Sbjct: 354 NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVK------PIGNAA 407 Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186 NR+ + + + V HLKS D+ + + S+ Sbjct: 408 TLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSR 467 Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A + DW+ + ++ GD N +T++ + + S Sbjct: 468 AAAKIADWLARNPTGAPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKVGSG 522 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287 + +D+ + + I +E Sbjct: 523 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAP 582 Query: 288 RGKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 583 DAYRSSDHDPVLIDI 597 >gi|134278080|ref|ZP_01764794.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 305] gi|134249864|gb|EBA49944.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 305] Length = 624 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 94/315 (29%), Gaps = 47/315 (14%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ N + + + R +Y + K LDAD++ L E+ Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIE 353 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + + S R + I A+ + V+ P+ A Sbjct: 354 NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVK------PIGNAA 407 Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186 NR+ + + + V HLKS D+ + + S+ Sbjct: 408 TLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSR 467 Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A + DW+ + ++ GD N +T++ + + S Sbjct: 468 AAAKIADWLARNPTGAPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKVGSG 522 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287 + +D+ + + I +E Sbjct: 523 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAP 582 Query: 288 RGKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 583 DAYRSSDHDPVLIDI 597 >gi|254301107|ref|ZP_04968551.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 406e] gi|157811458|gb|EDO88628.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 406e] Length = 624 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 94/315 (29%), Gaps = 47/315 (14%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ N + + + R +Y + K LDAD++ L E+ Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIE 353 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + + S R + I A+ + V+ P+ A Sbjct: 354 NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVK------PIGNAA 407 Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186 NR+ + + + V HLKS D+ + + S+ Sbjct: 408 TLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSR 467 Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A + DW+ + ++ GD N +T++ + + S Sbjct: 468 AAAKIADWLARNPTGAPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKVGSG 522 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287 + +D+ + + I +E Sbjct: 523 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAP 582 Query: 288 RGKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 583 DAYRSSDHDPVLIDI 597 >gi|126442413|ref|YP_001063630.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 668] gi|167724713|ref|ZP_02407949.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei DM98] gi|217422484|ref|ZP_03453987.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 576] gi|254193781|ref|ZP_04900213.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei S13] gi|126221904|gb|ABN85409.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 668] gi|169650532|gb|EDS83225.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei S13] gi|217394715|gb|EEC34734.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 576] Length = 624 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 94/315 (29%), Gaps = 47/315 (14%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ N + + + R +Y + K LDAD++ L E+ Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIE 353 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + + S R + I A+ + V+ P+ A Sbjct: 354 NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVK------PIGNAA 407 Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186 NR+ + + + V HLKS D+ + + S+ Sbjct: 408 TLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSR 467 Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A + DW+ + ++ GD N +T++ + + S Sbjct: 468 AAAKIADWLARNPTGAPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKVGSG 522 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287 + +D+ + + I +E Sbjct: 523 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAP 582 Query: 288 RGKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 583 DAYRSSDHDPVLIDI 597 >gi|126455741|ref|YP_001076529.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106a] gi|242311247|ref|ZP_04810264.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106b] gi|254186048|ref|ZP_04892566.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei Pasteur 52237] gi|254264734|ref|ZP_04955599.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1710a] gi|126229509|gb|ABN92922.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106a] gi|157933734|gb|EDO89404.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei Pasteur 52237] gi|242134486|gb|EES20889.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106b] gi|254215736|gb|EET05121.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1710a] Length = 624 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 94/315 (29%), Gaps = 47/315 (14%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ N + + + R +Y + K LDAD++ L E+ Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIE 353 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + + S R + I A+ + V+ P+ A Sbjct: 354 NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVK------PIGNAA 407 Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186 NR+ + + + V HLKS D+ + + S+ Sbjct: 408 TLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSR 467 Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A + DW+ + ++ GD N +T++ + + S Sbjct: 468 AAAKIADWLARNPTGAPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKVGSG 522 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287 + +D+ + + I +E Sbjct: 523 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAP 582 Query: 288 RGKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 583 DAYRSSDHDPVLIDI 597 >gi|319650796|ref|ZP_08004935.1| hypothetical protein HMPREF1013_01541 [Bacillus sp. 2_A_57_CT2] gi|317397653|gb|EFV78352.1| hypothetical protein HMPREF1013_01541 [Bacillus sp. 2_A_57_CT2] Length = 926 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 43/325 (13%), Positives = 85/325 (26%), Gaps = 64/325 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGS 76 ++ + S+N+ S + T L + DI+ L E+ Sbjct: 484 PEEDQLTIASYNVENFSTKTDA-----------EKVTRLAEAIVKNMKHPDIIGLTEVQD 532 Query: 77 YNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + K + + +I Sbjct: 533 NDGPTDSGTTEADLSAALLIEKIKELGGPAY-TYTDIAPEDKQDGGQPGGNIRVGFLYNA 591 Query: 119 KNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 + V + + P + + +R+A+ E G+ + V+ Sbjct: 592 ERVTLSEGEKGSATDAVDFEDGKLTLNPGRIDPANEAFEDSRKALAAQFEFKGESVIVVA 651 Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215 H S L P S + A + ++ ++ V+ GDFN Sbjct: 652 NHFNSKGGDLPLFGKVQPPVLNSEIQRMKIANVVNGFVRDVKAEDPNANIVLLGDFNDFE 711 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 K + ++ K + N +D+ ++ N K Sbjct: 712 FSNP-----LKALKGDELTNMIEKVRAEERYTYNYQGNAQVLDHILVSNNLAKKTE---- 762 Query: 276 SEILYNEDDIKSRGKRLSDHCPISI 300 +IL+ R SDH P+ I Sbjct: 763 VDILHINSGFMEEHGRASDHDPVMI 787 >gi|187927854|ref|YP_001898341.1| endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12J] gi|187724744|gb|ACD25909.1| Endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12J] Length = 818 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 43/319 (13%), Positives = 85/319 (26%), Gaps = 47/319 (14%) Query: 20 VAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 VR+ S+N+ N + + + + R + + L+AD+V L Sbjct: 454 AQADVRVASFNVLNYFNGDGKGAGFDDPANRGAKTQAEFERQEAKIVAAIRALNADVVGL 513 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR-DSNNDIHTAIAVRKKNVRVLQQSYPL 130 E+ + + + R ++ + I AI + V P+ Sbjct: 514 MEIENDGYGDLSAIRRLTSQLGADWRYVDPGVPKLGGDAITVAIVYNSRTVE------PV 567 Query: 131 LGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKS-FCFLDSLENTYSPSCS----- 182 NR+ + + + V+ HLKS C + ++ Sbjct: 568 GAPATLAIDNRNRQPLARSFRRIGDTQNFTVVVNHLKSKGCSGATGKDADQGDGQSCWNP 627 Query: 183 LLSQQAQWLKDWITQKKESLVPF--VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + A + DW+ + ++ GD N K Sbjct: 628 TRVRAAGLIADWLATSPTGVADVGQLLIGDLNSYAKEDPV-----VLFAQKGYADMVAKF 682 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR------------ 288 + ID+ + + + I +E Sbjct: 683 VGKDAYSYVYGGESGYIDHALATPGLAERVRAVHEWHINADEPIALEYAFGHKSAEQQQT 742 Query: 289 -----GKRLSDHCPISIDY 302 R SDH P+ +D Sbjct: 743 FYAPDAYRSSDHDPVLVDL 761 >gi|313675898|ref|YP_004053894.1| endonuclease/exonuclease/phosphatase [Marivirga tractuosa DSM 4126] gi|312942596|gb|ADR21786.1| Endonuclease/exonuclease/phosphatase [Marivirga tractuosa DSM 4126] Length = 272 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 44/302 (14%), Positives = 88/302 (29%), Gaps = 30/302 (9%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 + KY + L+ S +Q ++ ++NI + +EGV W N + + Sbjct: 1 MLKYGMIFSVVLLFSVNSFSQT-KVCTFNIKYENPKEGVHQWDNRK-------EQILKLI 52 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 K D DI+ +QE+ + S + Sbjct: 53 KIEDVDIIGMQEVVHSQIRFLEAGLAEYARIGVARDDGKSKGEYSPIFYKKDRYTIIDSA 112 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 P + AK ++ A R + K +L ++ F + S Sbjct: 113 TFWLSPNPQIPAK-AWDAALPRVCTWAKLIDQDTKDLILVLNTH---FDHVGSEARAKSV 168 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 L+ + L+ ++ GDFN + ++ Sbjct: 169 DLILSKINELE--------HNGKVILMGDFNLEPQSKPIQKIIDSELNDAFEAELNLGPI 220 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + + IDY + F Y ++ + LSDH P+ ++ Sbjct: 221 GTYNAFKIGENYERRIDYVFY----------QGFKIKSYKNYSLRIQDTFLSDHFPVVVE 270 Query: 302 YD 303 ++ Sbjct: 271 FE 272 >gi|229010104|ref|ZP_04167318.1| Sphingomyelinase C [Bacillus mycoides DSM 2048] gi|228751237|gb|EEM01049.1| Sphingomyelinase C [Bacillus mycoides DSM 2048] Length = 333 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 52/310 (16%), Positives = 103/310 (33%), Gaps = 37/310 (11%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +++++ N+ LS L+ N + +D Y K + D+V L E+ NA Sbjct: 33 QNNTLKVMTHNVYMLSTN----LYPNWGQNERADLIGAADYMK--NQDVVILNEVFDNNA 86 Query: 80 VAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 ++ T E S+ +A+ K V + Y + Sbjct: 87 SNRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKIQY-V 145 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 N+ V V+ N + + V+ HL++ D++ SP+ S+ ++Q Q Sbjct: 146 FEKGCGPDNLSNKGFVYTKVKKNDRFVHVIGTHLQA---EDNMCGQTSPA-SVRTKQLQE 201 Query: 191 LKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 ++++I + + +I GD N N +KT+ + Sbjct: 202 IQEFIKNKNIPNNEYVLIGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTATWDA 261 Query: 245 C-----NANKNLRNKIPIDYFVMDQNAY-----KFLIQESFSEILYNEDDIKSRGKR-LS 293 N +DY + ++ + + +S S +K S Sbjct: 262 TTNSIAKYNFPDSPAEYLDYIITSKDHANPSYIENKVLQSKSPQWTVTSWLKEYTYNDYS 321 Query: 294 DHCPISIDYD 303 DH P+ Sbjct: 322 DHYPVEATIS 331 >gi|108762235|ref|YP_632710.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] gi|108466115|gb|ABF91300.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] Length = 329 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 41/300 (13%), Positives = 88/300 (29%), Gaps = 39/300 (13%) Query: 15 PCTASVAQKVRLVSWNINTLSEQ--------EGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 P ++ VR+ ++N+ L + + L L+A Sbjct: 53 PPDTALEGSVRIATFNVQRLFDTVCDSDACGGSNYEALPTPSEFGLQADRLASAISRLNA 112 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D+V L E+ + ++ + + R ++ +AV + + Sbjct: 113 DVVLLAEVETQASLDALTSRLP--------RFGYSELGETGAAASVDVAVLSVHPITDVR 164 Query: 127 SYPL--LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + L D + +R +E+ ++++GKK+ V H +S D+ Sbjct: 165 GHRERTLWRPDGSATRFSRELLEVHLDVDGKKVIVFSAHFRSKSNDDAG---------RR 215 Query: 185 SQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 +A +D + ++ V+ GD N L Sbjct: 216 FAEAVATRDIVAGAAQAAPDALVVLGGDLNDVPGSEPIT----ALERDGALLRVSSDRPA 271 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 S + ID+ + ++ + G SDH + D+ Sbjct: 272 SETWTYTYHGDTQAIDHLYL------ARGGGTYVPGSFRAARDPRGGYGGSDHAAVFADF 325 >gi|166714173|ref|ZP_02245380.1| nuclease [Xanthomonas oryzae pv. oryzicola BLS256] Length = 572 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 84/324 (25%), Gaps = 35/324 (10%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60 L L V +R+ S+N+ G + ++ + L Sbjct: 256 LTLPAMPTAVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 315 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIA 115 L AD+ L E+ + A + I+ + I I Sbjct: 316 IVPLGADVAALMELENDGNAADAAVAQLVAALNAAGKDKDWHFIDSGSGPGADAIRVGIV 375 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKS-FCFLDSL 173 R V + + L G +R + G V+ H KS C S Sbjct: 376 YRSSQVTPVGKPATLTGGPFDNH---SRVPLAQAFRSTRGATFVVVANHFKSKGCGNASG 432 Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWK 226 + A+ L W+ V+ GDFN + Sbjct: 433 ADADQQDGQACWNATRTESAKRLHQWLQTDPTGAQTKRAVLLGDFNAYAMEMPMRS---- 488 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + + F + + +D+ ++ K L I + D Sbjct: 489 -LRASGWQDAFAVAGVKQPYSFVYDGMSGRLDHALLSPAMAKQLRGAVEWHINADVMDAA 547 Query: 287 SRG-------KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 548 GYAKRNLPGPWRSSDHDPVLLGFS 571 >gi|53716715|ref|YP_105078.1| putative extracellular nuclease [Burkholderia mallei ATCC 23344] gi|53722864|ref|YP_111849.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei K96243] gi|67643158|ref|ZP_00441906.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei GB8 horse 4] gi|121597344|ref|YP_991036.1| putative extracellular nuclease [Burkholderia mallei SAVP1] gi|124382710|ref|YP_001025437.1| putative extracellular nuclease [Burkholderia mallei NCTC 10229] gi|126447726|ref|YP_001077497.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei NCTC 10247] gi|167820854|ref|ZP_02452534.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 91] gi|254177252|ref|ZP_04883908.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei ATCC 10399] gi|254203011|ref|ZP_04909373.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei FMH] gi|254208344|ref|ZP_04914693.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei JHU] gi|52213278|emb|CAH39321.1| putative endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei K96243] gi|52422685|gb|AAU46255.1| putative extracellular nuclease [Burkholderia mallei ATCC 23344] gi|121225142|gb|ABM48673.1| putative extracellular nuclease [Burkholderia mallei SAVP1] gi|126240580|gb|ABO03692.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei NCTC 10247] gi|147746056|gb|EDK53134.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei FMH] gi|147751031|gb|EDK58099.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei JHU] gi|160698292|gb|EDP88262.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei ATCC 10399] gi|238524427|gb|EEP87860.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei GB8 horse 4] gi|261826943|gb|ABN00602.2| putative extracellular nuclease [Burkholderia mallei NCTC 10229] Length = 624 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 94/315 (29%), Gaps = 47/315 (14%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ N + + + R +Y + K LDAD++ L E+ Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIE 353 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + + S R + I A+ + V+ P+ A Sbjct: 354 NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVK------PIGNAA 407 Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186 NR+ + + + V HLKS D+ + + S+ Sbjct: 408 TLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSR 467 Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A + DW+ + ++ GD N +T++ + + S Sbjct: 468 AAAKIADWLARNPTGAPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKVGSG 522 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287 + +D+ + + I +E Sbjct: 523 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAP 582 Query: 288 RGKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 583 DAYRSSDHDPVLIDI 597 >gi|317504528|ref|ZP_07962503.1| endonuclease/exonuclease/phosphatase [Prevotella salivae DSM 15606] gi|315664350|gb|EFV04042.1| endonuclease/exonuclease/phosphatase [Prevotella salivae DSM 15606] Length = 283 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 30/303 (9%), Positives = 70/303 (23%), Gaps = 25/303 (8%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++++ + L+ C +AQ + ++NI + + L + Sbjct: 1 MKRFTFLAITLLLGCNL-MAQSFYVGTYNIRYNNPDDIAEGNA-----WKQRCPHLCDFI 54 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 I QE+ + + + + + + Sbjct: 55 NFEQPVIFGTQEVLVDQLHDLQKGLDHYSTLGVGREDGKEAGEYAAIFFKSDALKCLDSG 114 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 P + A R E K + S Sbjct: 115 YFWLSETPN-KPSLGWDAACIRICTWGKFEDKASKKTFFFFNTHM---DHVGTKARRESA 170 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 L+ Q + + ++ GDFN + + + Sbjct: 171 HLILNQIKAIAK--------NNHVILTGDFNVDQTDEIYKIFSDSGLLRDCYANAKQRMA 222 Query: 242 DSRCNANKNLRNK--IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID+ + + I N + + +SDH P+ Sbjct: 223 PIGTWNDYMQDYRDMARIDHIFVSNDFNIEHYG-----IFTNSYWLGKTRRNISDHYPVM 277 Query: 300 IDY 302 + Sbjct: 278 VKL 280 >gi|254882565|ref|ZP_05255275.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 4_3_47FAA] gi|319642095|ref|ZP_07996761.1| hypothetical protein HMPREF9011_02361 [Bacteroides sp. 3_1_40A] gi|254835358|gb|EET15667.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 4_3_47FAA] gi|317386361|gb|EFV67274.1| hypothetical protein HMPREF9011_02361 [Bacteroides sp. 3_1_40A] Length = 336 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 38/341 (11%), Positives = 97/341 (28%), Gaps = 47/341 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRT 50 ++K +L L + + R++ +N+ L + + +L + + R Sbjct: 1 MKKTILFLCLCYLVGVTYAQEPFRVMFYNVENLFDCQHDTLKNDYEFLPDAPKGWTQARY 60 Query: 51 TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 + + D+V L E+ + + + + + + + Sbjct: 61 HDKLAKIAKVIIATGEENVPDLVGLCEVENDHCLKDLTENSPLREAGYRYVMTDSPDE-- 118 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLK 165 I A+ ++ + ++L + L R R + ++ ++ +G + V H+ Sbjct: 119 -RGIDVALLYQRGSFKLLGK-NSLSVPYKEMERRPTRDILHVMGQVASGDTLDVFVCHMP 176 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 S + Y L + Q + +I GDFN Sbjct: 177 SRAGGEEKSEPYR----LFTAQILNIAADSIMNLRQHPNVMIMGDFNDYPTNNSIAKVLG 232 Query: 226 KTIDPND--SLIRFPKEKDSRCNANKNLRNKIPIDYFVMD-------QNAYKFLIQESF- 275 + + + + + +D ++ + + Sbjct: 233 AVAPKGEVQAKKLYNLMDGRKEGTYRYRGEWGVLDQLIVSGFLLQGHDSMRTSYDKAQIL 292 Query: 276 -------------SEILYNEDDIKSRGKRLSDHCPISIDYD 303 +I K SDH P+ +D++ Sbjct: 293 KYPFLLEEDEKYGGDIPSRTYWGKKYHGGYSDHLPVCVDFE 333 >gi|167907619|ref|ZP_02494824.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei NCTC 13177] Length = 624 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 94/315 (29%), Gaps = 47/315 (14%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ N + + + R +Y + K LDAD++ L E+ Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYDEFVRQDAKIVSALKALDADVIGLMEIE 353 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + + S R + I A+ + V+ P+ A Sbjct: 354 NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVK------PIGNAA 407 Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186 NR+ + + + V HLKS D+ + + S+ Sbjct: 408 TLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSR 467 Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A + DW+ + ++ GD N +T++ + + S Sbjct: 468 AAAKIADWLARNPTGAPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKVGSG 522 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287 + +D+ + + I +E Sbjct: 523 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAP 582 Query: 288 RGKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 583 DAYRSSDHDPVLIDI 597 >gi|308070047|ref|YP_003871652.1| extracellular nuclease [Paenibacillus polymyxa E681] gi|305859326|gb|ADM71114.1| Predicted extracellular nuclease [Paenibacillus polymyxa E681] Length = 691 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 42/321 (13%), Positives = 84/321 (26%), Gaps = 59/321 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+ + S+N+ +G KR + K DI+ L E+ N Sbjct: 332 KLTVASFNVENFDPGDG--------KRIDQLGQAIA--VKLNHPDIIGLLEVQDNNGEKD 381 Query: 83 V-----------------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 F N +I + V + Sbjct: 382 DGTTDASESFRVLIEAIRARGGPKYAFTDIAPDNNKDGGAPGGNIRVGFLYNPQRVTLTD 441 Query: 126 QS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 + P + S +R+ + E G+++ V+ H S Sbjct: 442 KPKGDSVTSVTYGVQGLSLNPGRIDPLNASLEDSRKPLAAEFEFEGQQVIVVANHFNSKG 501 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKE------SLVPFVIAGDFNRKINYLGNND 222 + P Q + + + V+ GD N Sbjct: 502 GDQAPFGGIQPPVRSSEIQRAKIATIVNGFVKSVLQVNPKANMVVLGDLNDFQFS----- 556 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + + + + + + N +D+ ++ + K S +I++ Sbjct: 557 ETLALLRGQELTNLIDHLDEKERYSYIHEGNSQTLDHMLVSPSLSK----TSVLDIVHMN 612 Query: 283 DDIKSRGKRLSDHCPISIDYD 303 D + R+SDH P+ D Sbjct: 613 ADFSAADGRVSDHDPLVAQID 633 >gi|296387571|ref|ZP_06877046.1| predicted extracellular nuclease [Pseudomonas aeruginosa PAb1] Length = 780 Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats. Identities = 52/329 (15%), Positives = 100/329 (30%), Gaps = 45/329 (13%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWK------NSVKRTTSDYTLLRQYAKNLDADI 68 P +V ++R+ S+N+ +G N+ + + ADI Sbjct: 446 PAQPAVEGRLRVASFNVLNYFNGDGKGGGFPTSRGANTAEEFQRQKAKIVAAILASKADI 505 Query: 69 VFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRD--SNNDIHTAIAVRKKNV 121 V L E+ + +A+A + + + R +++I + R V Sbjct: 506 VGLMEIENDGYGEFSAIADLVNGLNASLPQGQRYAFVNPNRAKLGSDEIAVGLIYRGDKV 565 Query: 122 RV-LQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSF---CFLDSLEN 175 R + F NR + + G+++ + HLKS C D Sbjct: 566 RTYRSAAVLDSSVNPEFDDTRNRPTLAQTFQEINGGERLTIAVNHLKSKGSACDGDPDTG 625 Query: 176 TYSPSCS-LLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 +C+ ++ AQ L DW+ +I GD N N I Sbjct: 626 DGQGNCNLTRARAAQALVDWLAGDPTGAKEPDRLIIGDLNSYAKEDPVN-----VIRGAG 680 Query: 233 SLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-- 289 ++ + + +D+ + + + + + I +E + Sbjct: 681 YTDLVARQAGAGKGYSYVFSGQSGYLDHALANASLARQVRGAVEWHINADEPRVLDYNVE 740 Query: 290 ---------------KRLSDHCPISIDYD 303 R SDH P+ I D Sbjct: 741 FKTPRQQDSLYNAEPYRASDHDPVVIGID 769 >gi|56476029|ref|YP_157618.1| exodeoxyribonuclease III [Aromatoleum aromaticum EbN1] gi|56312072|emb|CAI06717.1| Exodeoxyribonuclease III [Aromatoleum aromaticum EbN1] Length = 253 Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats. Identities = 31/302 (10%), Positives = 80/302 (26%), Gaps = 72/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + + D++ LQE Sbjct: 1 MKIATWNVNSL----------------KVRLPHVLDWLAANRPDVLCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + S + +A+ + + +G + Sbjct: 35 LKLEDKSFPSAEIEAAGYHAAFSGQKTYNGVAILSR------SALAGIGHGIPGFDDEQK 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V+ + + + S + Y + L +W+ ++ ++ Sbjct: 89 RVLAATVN----GVRVICGYFPNGQAVGSEKFAYK------LRWLAALTEWLREELKAHQ 138 Query: 204 PFVIAGDFNRKINY-------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 V+ GDFN + + + + Sbjct: 139 RLVLTGDFNIAPEDRDAHPDWKDEIHVSPAERAAFAALTGLGLADAYRLFPQDD-KSFSW 197 Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 ++ ID+ ++ + D + +R SDH P+ + Sbjct: 198 WDYRMGAFRRNFGLRIDHILLSPALRDVCCACTI-------DKAPRKLERPSDHAPVIAE 250 Query: 302 YD 303 + Sbjct: 251 LE 252 >gi|260828432|ref|XP_002609167.1| hypothetical protein BRAFLDRAFT_92542 [Branchiostoma floridae] gi|229294522|gb|EEN65177.1| hypothetical protein BRAFLDRAFT_92542 [Branchiostoma floridae] Length = 429 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 36/289 (12%), Positives = 85/289 (29%), Gaps = 17/289 (5%) Query: 24 VRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNA 79 R++ WNI LS + + + + + D+D++ QE+ ++ Sbjct: 145 FRVMQWNILAQALSQADDSFVRCPPAALNWDVRKFRILEEIRTYDSDVLCFQEVDHYHDF 204 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + + + +NN A+ +K ++ +L ++ + Sbjct: 205 LEPALKSLGYRGLFYPKPDSPALYCPNNNGPDGCALFFKKDKFSLVDADGIVLSSRGFET 264 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 A+ ++ + K F + L S+Q + L + Sbjct: 265 NQ---VALFAKLQFSDPS----TGGAKPFVLGVTHLKARKGWERLRSEQGKDLLKQTQKF 317 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL----IRFPKEKDSRCNANKNLR-N 253 P V+ GDFN + + + N + E + Sbjct: 318 SGKGTPVVLCGDFNAEPTEHVYSVMSQSKMKLNSAYKSLSDDKTSEPVYTTWTVRTDGEW 377 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +DY ++ ++ + SDH + D+ Sbjct: 378 RQTLDYIFFSKDKFQVETCLEIPPEELVGETRLPSHTYPSDHLSLVCDF 426 >gi|218889810|ref|YP_002438674.1| predicted extracellular nuclease [Pseudomonas aeruginosa LESB58] gi|218770033|emb|CAW25795.1| predicted extracellular nuclease [Pseudomonas aeruginosa LESB58] Length = 780 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 52/329 (15%), Positives = 100/329 (30%), Gaps = 45/329 (13%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWK------NSVKRTTSDYTLLRQYAKNLDADI 68 P +V ++R+ S+N+ +G N+ + + ADI Sbjct: 446 PAQPAVEGRLRVASFNVLNYFNGDGKGGGFPTSRGANTAEEFQRQKAKIVAAILASKADI 505 Query: 69 VFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRD--SNNDIHTAIAVRKKNV 121 V L E+ + +A+A + + + R +++I + R V Sbjct: 506 VGLMEIENDGYGEFSAIADLVNGLNASLPQGQRYAFVNPNRAKLGSDEIAVGLIYRGDKV 565 Query: 122 RV-LQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSF---CFLDSLEN 175 R + F NR + + G+++ + HLKS C D Sbjct: 566 RTYRSAAVLDSSVNPEFDDTRNRPTLAQTFQEINGGERLTIAVNHLKSKGSACDGDPDTG 625 Query: 176 TYSPSCS-LLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 +C+ ++ AQ L DW+ +I GD N N I Sbjct: 626 DGQGNCNLTRARAAQALVDWLAGDPTGAKEPDRLIIGDLNSYAKEDPVN-----VIRSAG 680 Query: 233 SLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-- 289 ++ + + +D+ + + + + + I +E + Sbjct: 681 YTDLVARQAGAGKGYSYVFSGQSGYLDHALANASLARQVRGAVEWHINADEPRVLDYNVE 740 Query: 290 ---------------KRLSDHCPISIDYD 303 R SDH P+ I D Sbjct: 741 FKTPRQQDSLYNAEPYRASDHDPVVIGID 769 >gi|107103426|ref|ZP_01367344.1| hypothetical protein PaerPA_01004496 [Pseudomonas aeruginosa PACS2] Length = 780 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 52/329 (15%), Positives = 100/329 (30%), Gaps = 45/329 (13%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWK------NSVKRTTSDYTLLRQYAKNLDADI 68 P +V ++R+ S+N+ +G N+ + + ADI Sbjct: 446 PAQPAVEGRLRVASFNVLNYFNGDGKGGGFPSSRGANTAEEFQRQKAKIVAAILASKADI 505 Query: 69 VFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRD--SNNDIHTAIAVRKKNV 121 V L E+ + +A+A + + + R +++I + R V Sbjct: 506 VGLMEIENDGYGEFSAIADLVNGLNASLPQGQRYAFVNPNRAKLGSDEIAVGLIYRGDKV 565 Query: 122 RV-LQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSF---CFLDSLEN 175 R + F NR + + G+++ + HLKS C D Sbjct: 566 RTYRSAAVLDSSVNPEFDDTRNRPTLAQTFQEINGGERLTIAVNHLKSKGSACDGDPDTG 625 Query: 176 TYSPSCS-LLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 +C+ ++ AQ L DW+ +I GD N N I Sbjct: 626 DGQGNCNLTRARAAQALVDWLAGDPTGAKEPDRLIIGDLNSYAKEDPVN-----VIRSAG 680 Query: 233 SLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-- 289 ++ + + +D+ + + + + + I +E + Sbjct: 681 YTDLVARQAGAGKGYSYVFSGQSGYLDHALANASLARQVRGAVEWHINADEPRVLDYNVE 740 Query: 290 ---------------KRLSDHCPISIDYD 303 R SDH P+ I D Sbjct: 741 FKTPRQQDSLYNAEPYRASDHDPVVIGID 769 >gi|86604847|ref|YP_473610.1| endonuclease/exonuclease/phosphatase family protein [Synechococcus sp. JA-3-3Ab] gi|86553389|gb|ABC98347.1| endonuclease/exonuclease/phosphatase family protein [Synechococcus sp. JA-3-3Ab] Length = 635 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 42/330 (12%), Positives = 99/330 (30%), Gaps = 51/330 (15%) Query: 16 CTASVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSD-------YTLLRQYAKNLDAD 67 +V +++ S+N+ N + + NS R + + + + +DAD Sbjct: 106 TPPAVGGSLKVASFNLFNYFNTFGNICFPNNSECRGARNAAEFTRQRDKIIEAIRRMDAD 165 Query: 68 IVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNV 121 IV L E+ + +++ + + T ++ + + I + V Sbjct: 166 IVGLNELENDGYGPNSSIQDLVNGLNQVMGPGTYAFVDVGVANLGGDAITNGFIYKPATV 225 Query: 122 RVLQQSYPLLGAKDSFSRAGN----RRAVELLV--EINGKKIWVLDIHLKSFCFLDSLEN 175 + + P ++ + R + + + N V+ HLKS + Sbjct: 226 EIAPGTNPAFLDTGELTQDPSLRRHRPPLAVTFRQKSNNAIFTVVVNHLKSKGSPCDPVD 285 Query: 176 TYSPSCS---LLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 + + AQ + +W++ + +I GD N K ++ Sbjct: 286 NDPFQGNCNGNRRRAAQEILNWLSTNPTGSTDPDVLIIGDLNAYAKEDPI-----KVLEE 340 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG- 289 F + +D+ + + + + + I +E Sbjct: 341 GG----FTNLNGPNSYSFSFQGQWGSLDHALANASLRPQVTGSAKWHINADEPVSLDYTT 396 Query: 290 ----------------KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 397 SFKSASQQSLFYAPDPFRSSDHDPVIVGLN 426 >gi|309780946|ref|ZP_07675685.1| extracellular ribonuclease/nuclease fusion protein [Ralstonia sp. 5_7_47FAA] gi|308920249|gb|EFP65907.1| extracellular ribonuclease/nuclease fusion protein [Ralstonia sp. 5_7_47FAA] Length = 738 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 43/319 (13%), Positives = 84/319 (26%), Gaps = 47/319 (14%) Query: 20 VAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 VR+ S+N+ N + + + + R + + L+AD+V L Sbjct: 374 AQADVRVASFNVLNYFNGDGKGAGFDDPANRGAKTQAEFERQEAKIVAAIRELNADVVGL 433 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR-DSNNDIHTAIAVRKKNVRVLQQSYPL 130 E+ + + + R ++ + I AI + V P+ Sbjct: 434 MEIENDGYGELSAIRRLTTQLGADWRYVDPGIPKLGGDAITVAIIYNGRTVE------PV 487 Query: 131 LGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKS-FCFLDSLENTYSPSCS----- 182 NR+ + + V+ HLKS C + ++ Sbjct: 488 GTPATLAIDDKNRQPLARSFRRIGGTQNFTVVVNHLKSKGCSGATGKDADQGDGQSCWNP 547 Query: 183 LLSQQAQWLKDWITQKKESLVPF--VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + A + DW+ + ++ GD N K Sbjct: 548 TRVRAAGLIADWLATSPTGVADIGKLLIGDLNSYAKEDPI-----VLFADKGYADMVAKF 602 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR------------ 288 + ID+ + + + I +E Sbjct: 603 VGKDAYSYVYGGEAGYIDHALATPGLAERVRAVHEWHINADEPIALEYSFAYKSAEQQQT 662 Query: 289 -----GKRLSDHCPISIDY 302 R SDH P+ +D Sbjct: 663 FYAPDAYRSSDHDPVLVDL 681 >gi|167829209|ref|ZP_02460680.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 9] Length = 624 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 94/315 (29%), Gaps = 47/315 (14%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ N + + + R +Y + K LDAD++ L E+ Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYDEFVRQDAKIVSALKALDADVIGLMEIE 353 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + + S R + I A+ + V+ P+ A Sbjct: 354 NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVK------PIGNAA 407 Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186 NR+ + + + V HLKS D+ + + S+ Sbjct: 408 TLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSR 467 Query: 187 QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A + DW+ + ++ GD N +T++ + + S Sbjct: 468 AAAKIADWLARNPTGTPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKVGSG 522 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287 + +D+ + + I +E Sbjct: 523 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAP 582 Query: 288 RGKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 583 DAYRSSDHDPVLIDI 597 >gi|307316912|ref|ZP_07596354.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti AK83] gi|306897534|gb|EFN28278.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti AK83] Length = 261 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 83/284 (29%), Gaps = 49/284 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 Q++R +++N+++ + D + D++ LQE+ A Sbjct: 19 QRIRFLTYNVHSCFGTDR-----------RLDPARIAAVIAECQPDVIALQEVDVGRART 67 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + H D AV L ++ PL + Sbjct: 68 GGIDQAHMIATHLNMEAEFHP-ALHLEDEKYGDAVLTALPMRLIKAAPLPSSG------E 120 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKK 199 R A+ + +++ K+ V+ HL + +QA L W+ Sbjct: 121 PRGALWVEIDVAAVKLQVIVTHLGLRG-------------AERLRQATALLGPGWLGGMA 167 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 E V+AGD N + + L + + ID+ Sbjct: 168 EGDAHVVLAGDLNAT-GRSTAYRLLARQLSDAQLLTGV-----KPRPTFPSRLPLLRIDH 221 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + + S + + SDH P+ + D Sbjct: 222 VLVGKG----VEVASCRVH------GSTLARSASDHLPLLAELD 255 >gi|167615248|ref|ZP_02383883.1| extracellular nuclease, putative [Burkholderia thailandensis Bt4] Length = 622 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 93/315 (29%), Gaps = 47/315 (14%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ N + + + R + K LDAD++ L E+ Sbjct: 292 LRVASFNVLNYFNSDGTGGGFDDPNNRGAKSDEEFARQDAKIVSALKALDADVIGLMEIE 351 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + S + S R + I A+ + V+ P+ A Sbjct: 352 NDGYGPLSAVRQLAAKLGDSWRVVDPGSARLGGDAIAVALIYDSRKVK------PVGNAA 405 Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186 NR+ + + + + V HLKS ++ + + S+ Sbjct: 406 TLAIDDKNRQPIAQTFQPFGGSRAVTVAVNHLKSKNCPNATGDDLDQGDGQGCWNATRSR 465 Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A + DW+ + ++ GD N +T++ + + + Sbjct: 466 AAAKVADWLARNPTGAHSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKIGAP 520 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287 + +D+ + + I +E Sbjct: 521 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKTAEQQRTYYAP 580 Query: 288 RGKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 581 DAYRSSDHDPVLIDI 595 >gi|313109336|ref|ZP_07795300.1| putative extracellular nuclease [Pseudomonas aeruginosa 39016] gi|310881802|gb|EFQ40396.1| putative extracellular nuclease [Pseudomonas aeruginosa 39016] Length = 780 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 99/329 (30%), Gaps = 45/329 (13%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQYAKNLDADI 68 P +V ++R+ S+N+ +G + + + ADI Sbjct: 446 PAQPAVEGRLRVASFNVLNYFNGDGKGGGFPTSRGANTVEEFQRQKAKIVAAILASKADI 505 Query: 69 VFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRD--SNNDIHTAIAVRKKNV 121 V L E+ + +A+A + + + R +++I + R V Sbjct: 506 VGLMEIENDGYGEFSAIADLVNGLNASLPQGQRYAFVNPNRAKLGSDEIAVGLIYRGDKV 565 Query: 122 RV-LQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSF---CFLDSLEN 175 R + F NR + + G+++ + HLKS C D Sbjct: 566 RTYRSAAVLDSSVNPEFDDTRNRPTLAQTFQEINGGERLTIAVNHLKSKGSACDGDPDTG 625 Query: 176 TYSPSCS-LLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 +C+ ++ AQ L DW+ +I GD N N I Sbjct: 626 DGQGNCNLTRARAAQALVDWLAGDPTGAKEPDRLIIGDLNSYAKEDPVN-----VIRGAG 680 Query: 233 SLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-- 289 ++ + + +D+ + + + + + I +E + Sbjct: 681 YTDLVARQAGAGKGYSYVFSGQSGYLDHALANASLARQVRGAVEWHINADEPRVLDYNVE 740 Query: 290 ---------------KRLSDHCPISIDYD 303 R SDH P+ I D Sbjct: 741 FKTPRQQDSLYNAEPYRASDHDPVVIGID 769 >gi|154490836|ref|ZP_02030777.1| hypothetical protein PARMER_00753 [Parabacteroides merdae ATCC 43184] gi|154088584|gb|EDN87628.1| hypothetical protein PARMER_00753 [Parabacteroides merdae ATCC 43184] Length = 357 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 43/361 (11%), Positives = 93/361 (25%), Gaps = 67/361 (18%) Query: 1 MIRKYVLALVFFLVPCTASVAQK-VRLVSWNINTLSEQEGVSLWKN-----------SVK 48 M R + + S Q R++S+N+ L + + L + + Sbjct: 1 MARTLTMTFFILTLFSLPSQGQTDFRVMSYNVENLFDTKDDPLTADNDFLPSGNRHWTSG 60 Query: 49 RTTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104 R L + ++ L E+ + + + ++ + + + Sbjct: 61 RFYHKLQQLAKVITAAGEWSTPALIGLCEVENDSVLVRLLDFTPLRRQHYRYCM---THG 117 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIH 163 I+ A ++ R + + R + + + I G +I V H Sbjct: 118 QDTRGINVAFLYQRDKFRYQGHTEHPVRFTRKQH-KHTRNILHVWGDVITGDRIDVFVCH 176 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 S + + + L D I +I GDFN + + Sbjct: 177 FPSRYGGEKESEPDRLDAART---LRTLCDSI-HNLRPAPHILIMGDFNDTPDDTSIREI 232 Query: 224 FWKT------IDPND---------------SLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 + + F K + ++K +D ++ Sbjct: 233 LDAHPVQVPCLSGSGSMPMKPRTNAYPSLLLYNLFAKNRSVPPGSHKYQGEWSQLDQIIL 292 Query: 263 DQNAYK-----FLIQESFSEI----------------LYNEDDIKSRGKRLSDHCPISID 301 + LI S + SDH P+ +D Sbjct: 293 SSSLTDTTSQMQLIPGSARIFSPSFLLIKDKTWRGERPFRTYYGFKYEGGYSDHLPLIVD 352 Query: 302 Y 302 + Sbjct: 353 F 353 >gi|319763690|ref|YP_004127627.1| exodeoxyribonuclease iii xth [Alicycliphilus denitrificans BC] gi|317118251|gb|ADV00740.1| exodeoxyribonuclease III Xth [Alicycliphilus denitrificans BC] Length = 258 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 80/301 (26%), Gaps = 70/301 (23%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L +WNIN+LS + + D + LQE+ K+ Sbjct: 3 LATWNINSLS----------------VRLPQVLAWLAANPVDAIGLQEL-------KLVD 39 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + + + +A+ + R Sbjct: 40 E---KFPHDAFEAAGYHAVCFGQKTYNGVAIVSRTPPRDVVRNI------PGHDDEQARV 90 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + +++ G + +++ + + + + Y Q L DW+ + + Sbjct: 91 IAATLDVEGGPLRLVNCYFVNGQAPGTDKFAYK------LQWLAALHDWLRAELAAHPRL 144 Query: 206 VIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNANKN 250 V+ GDFN + D ++ + F + + + Sbjct: 145 VLVGDFNVAPEDRDSYDPVGLKDTIHHTVEERQHFRQLLELGLTDAF-RMFEQPEKSYSW 203 Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + ID+ ++ + + D + + SDH P+ Sbjct: 204 WDYRQLGFQKNRGLRIDHILVSEALRAGVTAC-------RIDRAPRKNPQPSDHAPVVAT 256 Query: 302 Y 302 Sbjct: 257 L 257 >gi|223939432|ref|ZP_03631310.1| Endonuclease/exonuclease/phosphatase [bacterium Ellin514] gi|223891924|gb|EEF58407.1| Endonuclease/exonuclease/phosphatase [bacterium Ellin514] Length = 330 Score = 108 bits (269), Expect = 9e-22, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 102/321 (31%), Gaps = 39/321 (12%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +R V+ + + A R+ +N+ +++ + +T + +R+ Sbjct: 26 LRCIVIISAWLFLHSPLFAADTFRVACYNVENYLDEKTGT----RPLKTDAAKAKIRESI 81 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 L D++ L+EMGS NA+ ++ S + + + + D + +AV K Sbjct: 82 CALKPDVIALEEMGSTNALLELQGSLK-----SEGLDLPYWEHVAGFDTNIHVAVLSKFP 136 Query: 122 RVLQQSYPLLGAKDSFSRAG-NRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSP 179 + + R +R E+ ++ ++ HLKS + + Sbjct: 137 FTAHHPHTNDAFLLNGRRFQVSRGFAEVDIQPTTNYSFTLIAAHLKSR-----RQIAAAD 191 Query: 180 SCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFW----------KT 227 L ++A+ L++ I + + ++ GDFN + + Sbjct: 192 ESELRLEEAKVLREIIDARLAANPNLNLIVLGDFNDLHDSAPIKTILGGRSKKGLIDTRP 251 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + N + + N +DY ++ + + Sbjct: 252 AERNGDDHSHTDRRVASRNITWTHFYAKEDTYSRVDYILLSHGIARE------WNTNESY 305 Query: 283 DDIKSRGKRLSDHCPISIDYD 303 SDH P+ + Sbjct: 306 VLSIPNWGTGSDHRPLVASFT 326 >gi|167647627|ref|YP_001685290.1| endonuclease/exonuclease/phosphatase [Caulobacter sp. K31] gi|167350057|gb|ABZ72792.1| Endonuclease/exonuclease/phosphatase [Caulobacter sp. K31] Length = 1052 Score = 108 bits (269), Expect = 9e-22, Method: Composition-based stats. Identities = 33/312 (10%), Positives = 79/312 (25%), Gaps = 48/312 (15%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFL 71 + A K+ + ++N+ L + + + + N DI+ + Sbjct: 583 FTNLTAAADKLTIATYNLENLDPTDSA-----------AKFQSIAFDIANNLHHPDIIGV 631 Query: 72 QEMGSYNAVAK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 QE+ + + + + + +I Sbjct: 632 QEIQDADGAGSGSNLSGAATAQVLINAIVAAGGPRYTYVEVAPTVAGSTGGEPGGNIRNG 691 Query: 114 IAV---RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 R + V + + + +R + N + I + +H S Sbjct: 692 FLYDASRVQYVDGSARLVLDTDLTNGNAFNNSRNPLAADFVFNDETITAVSVHSTSRGGS 751 Query: 171 DSLENTYSPS----CSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDF 224 L P+ + + QA L ++ + + GDFN Sbjct: 752 GPLFGADQPAIVAGDASRTAQAVELTKFVNTLEATNPDHHVAVMGDFNGYYFET----AL 807 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + + K D ++ ++ S +I++ + Sbjct: 808 AGLEANANLYNLAKSLPVEERYSYKFEGYAQLFDNILVSKDLQ----SVSEFDIVHLNSE 863 Query: 285 IKSRGKRLSDHC 296 + SDH Sbjct: 864 QLPSAQVSSDHD 875 >gi|120553299|ref|YP_957650.1| endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8] gi|120323148|gb|ABM17463.1| Endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8] Length = 826 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 84/314 (26%), Gaps = 38/314 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWK------NSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + S+N+ +G+ ++ + L LDADI+ L E+ Sbjct: 456 GNLVVASFNVLNFFNGDGMGGGFPTARGADNPEELARQTEKLVSALVALDADIIGLMEIE 515 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSN-NDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + S + ++ +DI + R V ++ + L A Sbjct: 516 NDGYGQTSAIAELAGALGSEWQWVDPGLAQLGNDDIAVGLLYRADRVEIVGTAATLSAAP 575 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCS-----LLSQQA 188 A ++ + + + H KS C N + +Q A Sbjct: 576 FDQLNRQP-LAQTFRLKDSDDGVTIAVNHFKSKGCGSAEGSNADQNDGQGCWNPVRTQAA 634 Query: 189 QWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 Q L W+ +I GD N + + + Sbjct: 635 QALASWLADDATGTGEPDVLIIGDLNAYAQEDPI-----RALASAGYTDLLATYVGEQAY 689 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------------- 289 + +D+ + + + + I +E Sbjct: 690 SYVFYGQAGYLDHALANTALAGKIADTTVWPINADEPRALDYNTEFKTPEQQASFYAPDA 749 Query: 290 KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 750 YRASDHDPVIVALN 763 >gi|284039823|ref|YP_003389753.1| endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74] gi|283819116|gb|ADB40954.1| Endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74] Length = 266 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 94/311 (30%), Gaps = 59/311 (18%) Query: 3 RKYVLALVFFLVPCTASV----------AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS 52 K+V LVF L+ + A+ ++++++NI+ + + Sbjct: 1 MKFVHNLVFLLISLVSYAHEGPSDVAKKAKSLKVMTYNIHHCNPPSAG---------SKI 51 Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 D + + D+V LQE+ + + T SK + Sbjct: 52 DVEAIARVITAEKPDLVALQEVDVNTERSGKGLNQAKELARLTGMNFFFSKAIDHQGGDY 111 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLD 171 +AV + + + L R + VE GK++ HL Sbjct: 112 GVAVLSRFPILDSTRFILPIDPTIGG--ETRTIAAITVEPTKGKRMIFASTHLDLKEPN- 168 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 Q++ + I + +P ++AGDFN + + K I Sbjct: 169 ------------RLTQSELI---IRHFGATDLPVILAGDFNAQTDS--------KVIQLF 205 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 D + + KN ID+ ++ Q + Y Sbjct: 206 DQTFVRSCQSCAPTIPVKNPNR--AIDFVMVKQGGSLKSTSTRVVDEQY----------- 252 Query: 292 LSDHCPISIDY 302 SDH P+ ++ Sbjct: 253 ASDHLPVVVEL 263 >gi|218264352|ref|ZP_03478209.1| hypothetical protein PRABACTJOHN_03900 [Parabacteroides johnsonii DSM 18315] gi|218222083|gb|EEC94733.1| hypothetical protein PRABACTJOHN_03900 [Parabacteroides johnsonii DSM 18315] Length = 287 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 78/311 (25%), Gaps = 37/311 (11%) Query: 2 IRKYVLALVFFLVPCTASVA----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 ++K +L L L A ++ ++S+NI ++ +G + L Sbjct: 1 MKKVLLYLFTLLFSTNVVFAKHLDNEMNVMSFNIRMSTKSDGAN-------WWEYRKDLA 53 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 K D D+ QE+ + + S Sbjct: 54 ANVIKFYDVDMFGAQEVLHNQLTDLLDRLPDYGYVGVGREDGKTKGEYSPIFYRKDRFSV 113 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 K+ K + A R A + + + ++ + Sbjct: 114 VKSGNFWLAEDMNAVGKKGWDAACERVATWAVFKDKESEKEFFFLNTHL---DHMGQIAR 170 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW-KTIDPNDSLIR 236 SL+ +Q + L +P ++ GDFN K + Sbjct: 171 HEGASLVLEQVKLLA--------GNLPVIVTGDFNAVPTDDPIKVLTDEKDLRHLTHTRT 222 Query: 237 FPKEKDSRCNANKNLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + ++ IDY + N + + Sbjct: 223 LAPLCYGPEWTFHDYGRVPLDERVWIDYIFIKGN---------IKVLRHGVLTESLGNLY 273 Query: 292 LSDHCPISIDY 302 SDHCP+ Sbjct: 274 PSDHCPVISRL 284 >gi|150004910|ref|YP_001299654.1| hypothetical protein BVU_2373 [Bacteroides vulgatus ATCC 8482] gi|149933334|gb|ABR40032.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] Length = 336 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 38/341 (11%), Positives = 97/341 (28%), Gaps = 47/341 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRT 50 ++K +L L + + R++ +N+ L + + +L + + R Sbjct: 1 MKKTILFLCLCYLVGVTYAQEPFRVMFYNVENLFDCQHDTLKNDYEFLPDAPKGWTQARY 60 Query: 51 TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 + + D+V L E+ + + + + + + + Sbjct: 61 HDKLAKIAKVIIATGEENVPDLVGLCEVENDHCLKDLTENSPLREAGYRYVMTDSPDE-- 118 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLK 165 I A+ ++ + ++L + L R R + ++ ++ +G + V H+ Sbjct: 119 -RGIDVALLYQRGSFKLLGK-NSLSVPYKEMERRPTRDILHVMGQVASGDTLDVFVCHMP 176 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 S + Y L + Q + +I GDFN Sbjct: 177 SRAGGEEKSEPYR----LFTAQILNIAADSIINLRQHPNVMIMGDFNDYPTNNSIAKVLG 232 Query: 226 KTIDPND--SLIRFPKEKDSRCNANKNLRNKIPIDYFVMD-------QNAYKFLIQESF- 275 + + + + + +D ++ + + Sbjct: 233 AVAPKGEVQAKKLYNLMDGRKEGTYRYRGEWGVLDQLIVSGFLLQGHDSMRTSYDKAQIL 292 Query: 276 -------------SEILYNEDDIKSRGKRLSDHCPISIDYD 303 +I K SDH P+ +D++ Sbjct: 293 KYPFLLEEDEKYGGDIPSRTYWGKKYHGGYSDHLPVCVDFE 333 >gi|159028952|emb|CAO87413.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 1628 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 92/312 (29%), Gaps = 47/312 (15%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78 A K+ + S+N+ L+ E ++R + + DI+ LQE+ N Sbjct: 475 ADKLTIASYNVENLNPTES---NPGGLERFGVLANQIVNNLRA--PDIIGLQEIQDNNGP 529 Query: 79 ----------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 T+ F + + + +I V Sbjct: 530 INDGTVAADLTYQALIDAITAAGGPTYQ-FLNIDPVDGRDGGAPGTNIRVGYLYNPDRVS 588 Query: 123 VLQQSY-----PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 ++ S P+ + + +R+ + NG+++ V++ HL S + L Sbjct: 589 FVEGSLRRITDPIATPDNDGAFTNSRKPLVATFTFNGQEVTVINNHLTSRRGGNGLFGNV 648 Query: 178 SP----SCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 P + + QA + + + V+ GD N + ++F + + Sbjct: 649 QPPNIGGADVRANQATVINSEVNAILADDPNANVVVLGDLNGF-----DFEEFQQILSGG 703 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 N +D+ ++ N + + + Sbjct: 704 VLTNLSQTLDVRDRATFNFQGNSQALDHILITNNLASKAEYDIVRVNV-------DFLDQ 756 Query: 292 LSDHCPISIDYD 303 +DH PI + Sbjct: 757 PADHEPILATLN 768 >gi|16263840|ref|NP_436632.1| hypothetical protein SM_b20092 [Sinorhizobium meliloti 1021] gi|15139964|emb|CAC48492.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti 1021] Length = 252 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 40/284 (14%), Positives = 82/284 (28%), Gaps = 49/284 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 Q++R +++N+++ + D + D++ LQE+ A Sbjct: 10 QRIRFLTYNVHSCFGTDR-----------RLDPARIAAVIAECQPDVIALQEVDVGRART 58 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + H D AV L ++ PL + Sbjct: 59 GGIDQAHMIATHLNMEAEFHP-ALHLEDEKYGDAVLTALPMRLIKAAPLPSSS------E 111 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKK 199 R A+ + +++ K+ V+ HL + +QA L W+ Sbjct: 112 PRGALWVEIDVAAVKLQVIVTHLGLRG-------------AERLRQATALLGPGWLGGMA 158 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 + V+AGD N + + L + + ID+ Sbjct: 159 QGDAHVVLAGDLNAT-GRSTAYRLLARQLSDAQLLTGV-----KPRPTFPSRLPLLRIDH 212 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + S + + SDH P+ + D Sbjct: 213 VLVGKGIEV----ASCRVH------GSTLARSASDHLPLLAELD 246 >gi|313204713|ref|YP_004043370.1| endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes WB4] gi|312444029|gb|ADQ80385.1| Endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes WB4] Length = 289 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 93/311 (29%), Gaps = 37/311 (11%) Query: 1 MIRKYVLALVFFLV---PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 M ++ VL LV + A K+ + ++NI + + + + + Sbjct: 1 MTKRNVLILVVAMCWSHLFAGDNAGKLTIATYNIRLQTPVDSG------ARSWVNRKADV 54 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER--LINHSKRDSNNDIHTAIA 115 + K D DI +QE+G+ N A + ++ R + T Sbjct: 55 ARVIKKYDFDIFGVQEVGNKNQEADLKALIPDYTYFGKGRDNQVGTDGEQIGLFYKTKRF 114 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + K+ P + +K + A R V + + K F Sbjct: 115 LAKEKGSFFLSETPEVMSK-GWDAAYRRMCVWIRFQDAETKSEFFVFCSH---FDHMGVK 170 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 S L+ QQ + + P + GD N + T D + + Sbjct: 171 ARVESARLIEQQVKKIAA--------GKPVLFLGDLNTAPDETDMYKILHATFDDSREIS 222 Query: 236 RFPKEKDSRCNANKNLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 P N ++ IDY K + S+ I D S Sbjct: 223 AKPAIGSVGTFNNYDVSKMMLPVSERIDYIFC-----KKIKVFSYRVIS----DRFSEKT 273 Query: 291 RLSDHCPISID 301 SDH P+ I+ Sbjct: 274 YPSDHFPVMIE 284 >gi|119774614|ref|YP_927354.1| endonuclease/exonuclease/phosphatase [Shewanella amazonensis SB2B] gi|119767114|gb|ABL99684.1| endonuclease/exonuclease/phosphatase [Shewanella amazonensis SB2B] Length = 947 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 96/328 (29%), Gaps = 51/328 (15%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDADIVFLQEM 74 A +++ S+N+ +G+ + + + K +DADI+ L E+ Sbjct: 461 AGNLKVASFNVLNYFNGDGLGGGFPTARGANTAVEFERQRAKIISAMKAIDADILGLMEI 520 Query: 75 GS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVRVL---- 124 + +A+A + I+ + D I I R V Sbjct: 521 ENDGFGSESAIADLVNGLNAATEAGRYGYIDPAVPAIGTDAISVGIIYRTDKVTPEGAAA 580 Query: 125 ----QQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFL-----DSL 173 S K F+ NR + + + V H KS D Sbjct: 581 ILDSSNSAVDEDGKVLFNDQKNRPMLAQAFRHLETDEPVVVAVNHFKSKGSDCVAENDPD 640 Query: 174 ENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 +C+ ++ A+ + +++ + + P ++ GD N ++ Sbjct: 641 LGDGQGNCNLTRTRAAKAVGEFLNT-EFADAPVLVIGDLNSYAMENP-----LTALNEAG 694 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG--- 289 F + +D+ + + + ++ + I +E I Sbjct: 695 LTELFAHLGKESAYSYVFSGESGQLDHALANVALLEKVVDVTEWHINTDEPRILDYNVEF 754 Query: 290 --------------KRLSDHCPISIDYD 303 R SDH P+ I + Sbjct: 755 KSAGQVESLYSMDAYRSSDHDPVVISLE 782 >gi|121605670|ref|YP_982999.1| exodeoxyribonuclease III Xth [Polaromonas naphthalenivorans CJ2] gi|120594639|gb|ABM38078.1| Exodeoxyribonuclease III [Polaromonas naphthalenivorans CJ2] Length = 260 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 91/304 (29%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + D++ LQE+ + Sbjct: 1 MKIATWNVNSLT----------------VRLPQVLDWLAANPVDVLCLQELKLSDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ + F+ +R Sbjct: 41 ------KFPLQELEAAGYQSAVFGQKTYNGVAILSRTPARNIVKNI-----TGFTDEQSR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +++ ++ V++ + + S + Y + + L++W+ ++ Sbjct: 90 -VIAATLDMPTGEVRVVNGYFVNGQSPGSEKFEYK------MKWLESLRNWLREELAEHP 142 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN + + D ++ + L + D + Sbjct: 143 NLVLLGDFNITADDRDSYDPEGLRETIHHTSEERQHFQALVKLG-LNDAFRMFDQPEKSY 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ + + D + + +R SDH P+ Sbjct: 202 SWWDYREMAFRRNRGLRIDHILVSEALKPLVRSCVI-------DKLPRKNERPSDHVPVV 254 Query: 300 IDYD 303 ++ D Sbjct: 255 LELD 258 >gi|269125611|ref|YP_003298981.1| endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM 43183] gi|268310569|gb|ACY96943.1| Endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM 43183] Length = 573 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 86/307 (28%), Gaps = 31/307 (10%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 V++ S+N G ++R L K +DAD+V L E+ Sbjct: 270 APGPVGPATVKVASFNTLNWFTTVGGRGATTPLER-ERQLAKLVAALKGMDADVVGLMEV 328 Query: 75 GSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + AV + + + I H + IH A+ R VR P+ Sbjct: 329 ENNGDAAVKALVDRLNAAVGAGAYSWIRHPGPG-GDAIHVALIYRPGRVR------PVGP 381 Query: 133 AKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 A+ + R + G V+ HLKS + A+ Sbjct: 382 ARTAADAVFERPPLAQTFRHAGGGTPFTVIVGHLKSKRCDGASGPDADQGDGQGCYNARR 441 Query: 191 LKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ + + ++ GD N + R ++ Sbjct: 442 VRQARALAELAAAVPHPLVIGDLNSYGREDPIKTLAASGLAGQTERFVP----AGRRYSH 497 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------KRLSDH 295 +D+ + +++ + I +E I R SDH Sbjct: 498 VFDGQAGELDHVLAPPALARWITGVTIWHINADEPPIVDYNTEDNPPRLYRPDAYRSSDH 557 Query: 296 CPISIDY 302 P+ + Sbjct: 558 DPVIVGL 564 >gi|150008872|ref|YP_001303615.1| hypothetical protein BDI_2262 [Parabacteroides distasonis ATCC 8503] gi|256841134|ref|ZP_05546641.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|149937296|gb|ABR43993.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] gi|256736977|gb|EEU50304.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 287 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 96/313 (30%), Gaps = 41/313 (13%) Query: 2 IRKYVLALVFFLVPCTASVA----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 +++ +L L+ L A +K+ ++S+NI + + + W + D+ Sbjct: 1 MKRILLCLMVALFATGCLFAKNNDEKMNVMSYNIRYDNSGDKDNQW-----KFRRDFA-- 53 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 K +AD+ QE+ + + + + Sbjct: 54 ADLVKFYEADVFGAQEVLNNQLNDLLNRLPEYAYVGVGREDGKTKGEYAPIFYRKDRFSV 113 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLEN 175 +K+ K + A R A +++ GKK + L+ HL + Sbjct: 114 EKSGNFWLAEDINAIGKKGWDAACERVATWAILKDKNTGKKFFFLNTHL-----DHMGKV 168 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPN 231 SL+ +QA+ L +P ++ GDFN + + + + Sbjct: 169 ARHEGASLVLEQAKKL--------SENLPIIVTGDFNAVPSDEPIQVLTNPSDPRHLTHS 220 Query: 232 DSLIRFPKEKDSRCNAN--KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 ++ F + + + IDY + N + + Sbjct: 221 RTIAGFIYGPEWTFHDFGKIPYDKREWIDYIFVKGN---------IKVLRHGVLTETLNN 271 Query: 290 KRLSDHCPISIDY 302 SDHCP+ Sbjct: 272 LFPSDHCPVISTL 284 >gi|160900429|ref|YP_001566011.1| exodeoxyribonuclease III [Delftia acidovorans SPH-1] gi|160366013|gb|ABX37626.1| exodeoxyribonuclease III [Delftia acidovorans SPH-1] Length = 258 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 85/301 (28%), Gaps = 70/301 (23%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + +WN+N+LS + + + D + LQE+ + Sbjct: 3 IATWNVNSLS----------------VRLPQVLAWLQANPVDALALQELKLTDD------ 40 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + + +A + + G D +R Sbjct: 41 ----KFPLQALQEAGYHAVSHGQKTYNGVAWLTRTPVRDVVRN-IPGLDDEQAR-----I 90 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + ++ G + +++ + + + + Y + Q L+DW+ + Sbjct: 91 IAATLDAEGGPVRLINGYFVNGQAPGTDKFAYK------MRWLQALQDWVKSEMAIHPRL 144 Query: 206 VIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNANKN 250 V+ GDFN + D ++ + F + D + Sbjct: 145 VLVGDFNVAPEDRDSYDPIGLKDTIHHTVEERTHFQALLQLGLTDAF-RMFDQPEKSYSW 203 Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 ++ ID+ ++ + + S D + + SDH P+ + Sbjct: 204 WDYRMLGFQKNRGLRIDHILVSEALRPSVSACSV-------DRAPRKNPQPSDHAPVVVT 256 Query: 302 Y 302 Sbjct: 257 L 257 >gi|167584771|ref|ZP_02377159.1| Endonuclease/exonuclease/phosphatase [Burkholderia ubonensis Bu] Length = 572 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 93/315 (29%), Gaps = 47/315 (14%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ N + + + R Y + K LDAD++ L E+ Sbjct: 263 LRVASFNVLNYFNGNGLGGGFDDPANRGAKTYQEFVRQDAKIVSALKALDADVIGLMEIQ 322 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + + R + I A+ + V P+ A Sbjct: 323 NNGYGELSAVRQLAAKLGGHWRVVDPGTARLGGDAIAVALIYDSRKVE------PVGRAA 376 Query: 135 DSFSRAGNRRAVELLVEINGKK--IWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186 NR+ + G K + V+ HLKS D+ + + ++ Sbjct: 377 TLAIDDKNRQPLAQTFRRVGGKHALTVVVNHLKSKNCPDATSDDLDQGDGQGCWNATRTR 436 Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A L DW+ S ++ GDFN + + ++ + + Sbjct: 437 AAARLADWLAGTPTGASTQGVLLIGDFNSYTHEDPI-----RLLESRGYRNLVSRWIGAN 491 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR---------------- 288 + +D+ + + I +E Sbjct: 492 AYSYVYNGEAGYLDHALASLPLAAHVKAVHEWHINADEPVALQYTLAYKSAEQQRTWYAP 551 Query: 289 -GKRLSDHCPISIDY 302 R SDH P+ +D Sbjct: 552 DAYRSSDHDPVLVDI 566 >gi|294778476|ref|ZP_06743899.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus PC510] gi|294447738|gb|EFG16315.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus PC510] Length = 336 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 39/341 (11%), Positives = 100/341 (29%), Gaps = 47/341 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRT 50 ++K +L L + + R++ +N+ L + + +L + + R Sbjct: 1 MKKTILFLCLCYLVGVTYAQEPFRVMFYNVENLFDCQHDTLKNDYEFLPDAPKGWTQARY 60 Query: 51 TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 + + D+V L E+ + + + + + + + Sbjct: 61 HDKLAKIAKVIIATGEENVPDLVGLCEVENDHCLKDLTENSPLREAGYRYVMTDSPDE-- 118 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLK 165 I A+ ++ + ++L + L R R + ++ ++ +G + V H+ Sbjct: 119 -RGIDVALLYQRGSFKLLGK-NSLSVPYKEMERRPTRDILHVMGQVASGDTLDVFVCHMP 176 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 S + Y L + Q + +I GDFN Sbjct: 177 SRAGGEEKSEPYR----LFTAQILNIAADSIMNLRQHPNVMIMGDFNDYPTNNSIAKVLG 232 Query: 226 KTIDPND--SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK------------FLI 271 + + + + + +D ++ + ++ Sbjct: 233 AVAPKGEVQAKKLYNLMDGRKEGTYRYRGEWGILDQLIVSGFLLQGHDGICTSYDKAQIL 292 Query: 272 QESF---------SEILYNEDDIKSRGKRLSDHCPISIDYD 303 + F +I K SDH P+ +D++ Sbjct: 293 RHPFLLEEDEKYGGDIPSRTYWGKKYHGGYSDHLPVCVDFE 333 >gi|260910352|ref|ZP_05917025.1| endonuclease/exonuclease/phosphatase [Prevotella sp. oral taxon 472 str. F0295] gi|260635535|gb|EEX53552.1| endonuclease/exonuclease/phosphatase [Prevotella sp. oral taxon 472 str. F0295] Length = 310 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 31/317 (9%), Positives = 79/317 (24%), Gaps = 37/317 (11%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 ++ L L A+ Q + + S+NI ++ + + ++ Sbjct: 8 LVLLGAVLCMAFAAFGQTLVVGSYNIRYRNDGD-----EAKGHLWAKRCQVIADQLNYHH 62 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 D QE+ + + + + + + Sbjct: 63 PDAFGAQEVLKGQLDDMLRALPDYDYVGVGRDDGREAGEYAPIFYRRDRLDKLGDGYFWL 122 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + A R ++ +GK ++H Sbjct: 123 SPT-YTKPSLGWDAACIRICTWAKFKVRESGKVFLFFNLHTDHVG------------VKA 169 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + A+ + I +P V+ GDFN + ++ + ++ Sbjct: 170 RRESAKLVMKAIEGLGGKDMPVVLTGDFNVDQTDETYAIFTANARLNDAYVVAKHRFAEN 229 Query: 244 RCNANKNL--RNKIPIDYFVMDQNAYKFL---------------IQESFSEILYNEDDIK 286 + N + ID+ + + + D + Sbjct: 230 GTFNSFNPTLKTTSRIDHIFVSPRFSVARYAVLPNFYWTEEPATKSQKGQDAPQQIDLKQ 289 Query: 287 SRGKRLSDHCPISIDYD 303 + + SDH P+ + + Sbjct: 290 HQLRTASDHYPVFAEIN 306 >gi|87306888|ref|ZP_01089034.1| hypothetical protein DSM3645_00505 [Blastopirellula marina DSM 3645] gi|87290261|gb|EAQ82149.1| hypothetical protein DSM3645_00505 [Blastopirellula marina DSM 3645] Length = 253 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 38/280 (13%), Positives = 79/280 (28%), Gaps = 32/280 (11%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 +S+NI S ++G + W L+ + + D+D++ QE + Sbjct: 1 MSFNIRYGSAKDGENHWNIRKP-------LVIETIERYDSDLLGTQECLPFQEAYLREKL 53 Query: 87 NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146 + + + + + + + P S+ + R A Sbjct: 54 PQYDCYAVSREGKGTAGEECAIFYRKSRFELLDQGSIALSETPEKIGSVSWDSSLPRIAS 113 Query: 147 ELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + + +G + H F + + + LL Q + P Sbjct: 114 WVKLRDKQSGHAFTFWNTH-----FDHRGPKSRTEAAKLLVDQMKA--------TTESGP 160 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 V+ GDFN + + + + N + ID+ Q Sbjct: 161 VVLTGDFNADAGSSP-HQALATYLRDSWK-SAKWEGSAWTFNGWSDKSKGARIDWIFHSQ 218 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +G+ SDHCP++ F Sbjct: 219 GFQA--------TDSTIDRWKSDQGRYPSDHCPVTTTLTF 250 >gi|168700428|ref|ZP_02732705.1| probable secreted protein [Gemmata obscuriglobus UQM 2246] Length = 263 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 80/307 (26%), Gaps = 51/307 (16%) Query: 2 IRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 +R + ++ L + + +R++++NI+ +G D + Sbjct: 1 MRAIAVTVLLGLAGLVPADDKPERNVLRVLTYNIHHGEGTDG-----------KLDLARI 49 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + K D+V LQE+ + + K +AV Sbjct: 50 AEVIKAAKPDVVALQEVDRNTTRTGKVDQAAELAKLTG-LNAEFGKAIDLQGGGYGLAVL 108 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + + + L G + R R +++ VE G L D Sbjct: 109 SRFPLKGAKVHSLPGKE----RQEARIVLQVTVE-PGGPFPALTFLNTHLQHDDGP---- 159 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 +Q + + + FV+AGD N Sbjct: 160 -----TREKQIAKIDELFGTAAGA---FVLAGDLNAAPASAPIKALAKN-------WAFA 204 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + + IDY + + I SDH P Sbjct: 205 TEPGRKGLLTIPSDTPRQQIDYILFRP--ADRFRVAEANVIEEKV---------ASDHRP 253 Query: 298 ISIDYDF 304 + ++ Sbjct: 254 VFALVEW 260 >gi|332141756|ref|YP_004427494.1| extracellular ribonuclease/nuclease fusion protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327551778|gb|AEA98496.1| extracellular ribonuclease/nuclease fusion protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 1346 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 35/315 (11%), Positives = 88/315 (27%), Gaps = 38/315 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY--AKNLDADIVFLQEMGS--- 76 V++ S+N+ + + + ++ ++AD++ L E+ + Sbjct: 974 GDVKVASFNVLNYFNGPEFPTPRGADSVAEFERQKVKTIAAIVAMNADVLGLVEIENDGY 1033 Query: 77 --YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 +A+A + + + + ++I I + V + A Sbjct: 1034 SSESAIATLVDSVNAELGSDEYSYVALESQLGGDEIAVGIIYKPAVVSLQGNPVTSSNAP 1093 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC------FLDSLENTYSPSCSLLSQQA 188 + V NG+ + H KS ++ + L QA Sbjct: 1094 FDYGNRQP-LLQSFSVNSNGEDFTLAINHFKSKGSCGSATGNNADLGDGQGCWNELRTQA 1152 Query: 189 QW-LKDWITQKKES-LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + + Q + ++ GD N ++ Sbjct: 1153 AQGIISLVEQNSDILSDRVIVMGDLNAYAKEEPIL-----ALEEAGYSNLVNFFDGDSAY 1207 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------------- 289 + +D+ + + ++++ + I +E + Sbjct: 1208 SYSFGGEMGYLDHALSSPSLTEYVVDATVWHINADEPRVFDYNVEFKSETQLSSYYGADA 1267 Query: 290 KRLSDHCPISIDYDF 304 R SDH P+ + +F Sbjct: 1268 YRSSDHDPVVVVLNF 1282 >gi|269118848|ref|YP_003307025.1| endonuclease/exonuclease/phosphatase [Sebaldella termitidis ATCC 33386] gi|268612726|gb|ACZ07094.1| Endonuclease/exonuclease/phosphatase [Sebaldella termitidis ATCC 33386] Length = 283 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 102/315 (32%), Gaps = 51/315 (16%) Query: 2 IRKYVLALVFFLVPCT-------------ASVAQKVRLVSWNINTLSEQEGVSLWKNSVK 48 ++K ++L+ + C + K+R+ ++NI + Sbjct: 1 MKKLFISLILI-LSCFIYGEEKVLYNKVITNSNPKIRVATYNIAAGANN----------- 48 Query: 49 RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108 D L + K ++ DI+ +QE+ + + + + K Sbjct: 49 -FKVDLKLTAETIKKINPDIIAIQEVDRNTERSGRTDQIKVLSELTG-YNYVYGKTIDFQ 106 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGA-KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 IAV K+ V + L D+ R A+ V++ G ++ V I+ Sbjct: 107 GGEYGIAVLSKHPIVSNEIIKLPYTNTDTKKEEEPRIALVTKVDVPGFEVPVTFINTHL- 165 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 + ++ QQ + + + + ++AGDFN +N + + Sbjct: 166 --------DWHEDPNIRLQQVRTINEVTLDMRGIK---ILAGDFNDTLNSVIGREM---- 210 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + + + + ++ ID ++ + + +D Sbjct: 211 ----ERYWTTVFDGKTDHRTWPAVNPEVAIDQIFLNNAQVWKVEKVYVPNTGTEKDT--- 263 Query: 288 RGKRLSDHCPISIDY 302 K +SDH P+ +D Sbjct: 264 DWKTVSDHIPVIVDL 278 >gi|239814644|ref|YP_002943554.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110] gi|239801221|gb|ACS18288.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110] Length = 261 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 87/304 (28%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + + D++ LQE+ + Sbjct: 1 MKIATWNVNSLT----------------ARLQHVLDWLIANPVDVLCLQELKMSDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ D Sbjct: 41 ------KFPLDVLKSAGYEAAVFGQKTYNGVAILSLAPMRDVARNIGGFTDDQSR----- 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + VE + +++ + + + + Y + L++W+ + + Sbjct: 90 -VIAATVETPAGPLRIVNGYFVNGQAPGTDKFEYK------MGWLRALREWLRAEMAAHP 142 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN + D +K + + F + + + Sbjct: 143 NLVLLGDFNIAPEDRDSFDPVGLAETIHHTTEEREHFKALLQLGLVDSF-RLFEQPEKSF 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ++ ID+ ++ + + D + + ++ SDH P+ Sbjct: 202 SWWDYRMLGYQKNRGLRIDHILVSEPLVPRVKGCII-------DRVPRKWEKPSDHAPVV 254 Query: 300 IDYD 303 +D D Sbjct: 255 LDLD 258 >gi|332667070|ref|YP_004449858.1| endonuclease/exonuclease/phosphatase [Haliscomenobacter hydrossis DSM 1100] gi|332335884|gb|AEE52985.1| Endonuclease/exonuclease/phosphatase [Haliscomenobacter hydrossis DSM 1100] Length = 1056 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 96/325 (29%), Gaps = 48/325 (14%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQYAKNLDADI 68 P +A +++ ++N+ L +G + + + +DAD+ Sbjct: 571 PAPPKLAGDLKIATFNLLNLFNGDGNGGGFPTSRGASNLPAFRLQLRKIITAIRRMDADV 630 Query: 69 VFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 + LQE+ + A+ ++ + T L + R + I I + V Sbjct: 631 LGLQEVENDGFGPRTAIQELVDSLNAVLGAGTYALSSPGVRFGADQIVVGIIYKPAKVTP 690 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 L F NR + + G+K ++ HL+S + N Sbjct: 691 DGGPVFLNSNSGIF--QQNRLPLAQTFIDQRGEKFTLVVNHLRSKLGESTGLNADILDGQ 748 Query: 183 LLSQQAQ-----WLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 Q + + W+ + FV+ GDFN ++ + + Sbjct: 749 SAFNQVRTDAVQEILSWVQGDPTRSGDPDFVMLGDFNAYEQEDPI-----TLMEASGYVN 803 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE------------- 282 P + + +D+ + K + + I E Sbjct: 804 LVPAGQSKDFDGFLGD-----LDHIFASPSMAKQFVGGAKWIINSVESLSRFEYDAADLL 858 Query: 283 ----DDIKSRGKRLSDHCPISIDYD 303 DD R SDH P+ + Sbjct: 859 PGTADDPIGDEFRCSDHDPVIAGFT 883 >gi|77361838|ref|YP_341413.1| periplasmic calcium binding protein [Pseudoalteromonas haloplanktis TAC125] gi|76876749|emb|CAI87971.1| conserved protein of unknown function ; putative periplasmic calcium binding protein [Pseudoalteromonas haloplanktis TAC125] Length = 906 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 41/318 (12%), Positives = 84/318 (26%), Gaps = 43/318 (13%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT------LLRQYAKNLDADIVFLQEMGS 76 +R+ S+N+ +G + + S+ + + AD++ L E+ + Sbjct: 457 DLRVASFNVLNYFNGDGQGAGFPTSRGADSEAEFIRQEAKIVSAISAIQADVIGLMEIEN 516 Query: 77 YNA------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 + V N + + + ++ I TA+ R V + + Sbjct: 517 DGFGEFSAIASLVNALNDFDTANQYAFVNFGLDKIGSDAITTALIYRVNRVVEVGSAAIT 576 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ--- 187 + F A V + HLKS S + Sbjct: 577 TQSPFDFGNRPP-IAQSFKVLATDEVFTAAVAHLKSKGGCSSATGANQDKSDGQACWNET 635 Query: 188 ----AQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 A W+ K ++ GD N + Sbjct: 636 RVAGANAYASWLNSKPTGIDDEDIILIGDLNAYAMEDPIRAFADNGYKNA----VAELDG 691 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------------ 289 ++ + +DY ++ + ++ + I +E + Sbjct: 692 NTLGYSYSFSGRAGSLDYALVSPSLLSKIVATNDWHINADEPTLLDYNVEFKSDAQQSSL 751 Query: 290 -----KRLSDHCPISIDY 302 R SDH PI +D Sbjct: 752 YAAGPYRASDHDPIIVDI 769 >gi|315648386|ref|ZP_07901485.1| Endonuclease/exonuclease/phosphatase [Paenibacillus vortex V453] gi|315276080|gb|EFU39426.1| Endonuclease/exonuclease/phosphatase [Paenibacillus vortex V453] Length = 494 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 84/311 (27%), Gaps = 42/311 (13%) Query: 1 MIRKYVLALVFFLVP----CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 M+ ++ + + +R++S+N+ + + + Sbjct: 11 MMLTFLTTTSLSAASEPAGTAETSSGPLRIMSFNLRYAANDHQP---------WENRRPV 61 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 +R D++ QE V + R Sbjct: 62 MRNLILENQPDVIGTQEGLHRQIVDLENDLPGYGRIGVG-REGGEFGEYMAVFYKMDRLK 120 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174 + P + + S+ R + + NGK ++++ HL Sbjct: 121 PLEQSHFWLSDTPQIISSASWGNQIPRMVTWVRFQDLRNGKTFYMVNTHLDH-------- 172 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND-S 233 S + A + D + +P V+ GDFN + + + Sbjct: 173 ----QSEVSRQKSAALIIDKMKGFAP-DIPVVMTGDFNTVPGSDTYSIFTSNGLSDGHIT 227 Query: 234 LIRFPKEKDSRCNANKNL---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + + K+ + ID+ + ++ + + G+ Sbjct: 228 AKKHTNDDLGTFHNYKDPTGGGSGNRIDWILHS---------TGWNVLHSEIINYNEEGQ 278 Query: 291 RLSDHCPISID 301 SDH PI I Sbjct: 279 YPSDHYPIMIT 289 >gi|329925648|ref|ZP_08280466.1| endonuclease/exonuclease/phosphatase family protein [Paenibacillus sp. HGF5] gi|328939675|gb|EGG36018.1| endonuclease/exonuclease/phosphatase family protein [Paenibacillus sp. HGF5] Length = 272 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 101/323 (31%), Gaps = 72/323 (22%) Query: 1 MIRKY-VLALVFFLVPCTAS--------VAQKV--RLVSWNINTLSEQEGVSLWKNSVKR 49 M + + L F++P A+ ++V ++S+NI+ +G Sbjct: 1 MKKSFKSLIACLFIIPLFATGVMAEGKGQGKEVGTTVMSYNIHHGVGIDG---------- 50 Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINH 101 + ++ A+IV LQE+ + ++ + Y + Sbjct: 51 -QLSLQRIADVIRDSGAEIVGLQEVDRNYGERSDFRDQAKELAGLLGYHYAYGANLDLEP 109 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 + +NN + A+ K + ++ L R + +V + G + V + Sbjct: 110 GEGQTNNRQY-GTAIVSKYPILRSENTWLSSFG-----KEQRGVLHAVVNLKGIHVDVYN 163 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 HL + QAQ + I S P ++ GD N + + Sbjct: 164 THLGL-------------DVTSRMAQAQEI---IDLASGSQGPALLLGDLNAEPDSSE-- 205 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 ++ + + + + + IDY + N ++ + Sbjct: 206 ---FRLLLDSGLFVNSFEGI-DDAYTFPVINPSATIDYILTSPNVRH------ANQRVIQ 255 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 + SDH PI+ D F Sbjct: 256 TE--------ASDHLPIAADVVF 270 >gi|94313911|ref|YP_587120.1| putative endonuclease/exonuclease/phosphatase [Cupriavidus metallidurans CH34] gi|93357763|gb|ABF11851.1| putative endonuclease/exonuclease/phosphatase [Cupriavidus metallidurans CH34] Length = 848 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 45/319 (14%), Positives = 84/319 (26%), Gaps = 47/319 (14%) Query: 20 VAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 VR+ S+N+ N + + + + R + + +DAD+V L Sbjct: 454 AQADVRVASFNVLNYFNGDGKGTGFDDPNNRGAKSQAEFERQEAKIVAAIRAIDADVVGL 513 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR-DSNNDIHTAIAVRKKNVRVLQQSYPL 130 E+ + + + R ++ + I AI +NV P+ Sbjct: 514 MEIENDGYGDLSAIRRLTSQLGADWRYVDPGLPKLGGDAITVAIIYNSRNVE------PV 567 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKK--IWVLDIHLKS-FCFLDSLENTYSPSCS----- 182 NR+ + G V+ HLKS C + ++ Sbjct: 568 GVPATLAIDDKNRQPLARTFHRVGGTQNFTVVVNHLKSKGCTGAAGKDADQGDGQSCWNP 627 Query: 183 LLSQQAQWLKDWITQKKESLVPF--VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + A + DW+ + ++ GD N K Sbjct: 628 TRLRAAGLIADWLATSPTGVADVGKLLIGDLNSYAKEDPVL-----LFAEKGYADMVAKF 682 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------- 289 + ID+ + + I +E Sbjct: 683 VGKDAYSYVFGGESGYIDHALATSALADRVRAVHEWHINADEPIALEYSFAYKSAEQQQT 742 Query: 290 ------KRLSDHCPISIDY 302 R SDH P+ +D Sbjct: 743 FYAADPYRSSDHDPVLVDL 761 >gi|222054058|ref|YP_002536420.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. FRC-32] gi|221563347|gb|ACM19319.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. FRC-32] Length = 258 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 87/297 (29%), Gaps = 44/297 (14%) Query: 9 LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 L+ P ++ ++++N+++ +G + + + D DI Sbjct: 2 LIDIFQPSHPAMTIHFSVMTYNVHSCIGMDGKVSP-----------LRIAEVIAHYDPDI 50 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 V LQE+ + + + + HS + A+ + L + Sbjct: 51 VALQELDAGLTRSDLVDQAHLIAKSLEMSYHFHSSIQVEEGEY-GNAILSRFPIHLVKGG 109 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 L R AV VE+ G ++ V+ HL + QA Sbjct: 110 ALPTHP-VNKNLERRGAVWAEVELKGIRVQVVATHLGL-------------NRRERMCQA 155 Query: 189 QWLK--DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 L DW+ + P ++ GDFN F +++ R + K Sbjct: 156 NALSGPDWL-GHPDCRPPVILCGDFNALPGS-FVYRHFIRSLHDAHRKGRGRRLK----G 209 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + IDY + + I SDH P+ + Sbjct: 210 TWPVRLPLMRIDYLFVTPDITVRRISA----------HRTPLTMAASDHLPLVAALE 256 >gi|60680824|ref|YP_210968.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides fragilis NCTC 9343] gi|60492258|emb|CAH07023.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides fragilis NCTC 9343] Length = 285 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 38/316 (12%), Positives = 84/316 (26%), Gaps = 43/316 (13%) Query: 1 MIRKYVLALVFFLVPCTASVAQKV---RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 M + VF + + + R+ ++NI + + ++ WK + Sbjct: 1 MNKICFFIGVFITLLLAGCSSNPITHVRVATFNIRYDNPGDSLNSWKYRK-------EKV 53 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 ++ + D++ +QE+ ++ + + + Sbjct: 54 CEFIREKHPDVLGMQEVLNHQLKDLLSGLPDYAYVGVGREDGKTQGEYAPVFYRKDKYDL 113 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLEN 175 + +P K + A R A ++ GK+ +L+ H F Sbjct: 114 LDSNTFWLSEHPDSIGKLGWDAACTRVATWAKLKDKTTGKEFLMLNTH-----FDHVGTE 168 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 S L+ + + + P ++ GDFN + D+ Sbjct: 169 ARRNSALLIIDKIKEIA--------GTHPAMMTGDFNVSEEWEAYKTITSNEFVLKDAWK 220 Query: 236 RFPKEKDSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 K+ + ID+ + + Sbjct: 221 IAGKQSGEN---YTFHDFGRVPVGEREKIDFIFVTPQIKVA--------DAEIISSAITD 269 Query: 289 GKRLSDHCPISIDYDF 304 LSDH D +F Sbjct: 270 STYLSDHNAHLADLEF 285 >gi|127513098|ref|YP_001094295.1| endonuclease/exonuclease/phosphatase [Shewanella loihica PV-4] gi|126638393|gb|ABO24036.1| Endonuclease/exonuclease/phosphatase [Shewanella loihica PV-4] Length = 945 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 44/329 (13%), Positives = 98/329 (29%), Gaps = 51/329 (15%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWK------NSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + +++ S+N+ +G+ ++ + ++DADI L Sbjct: 459 AAGGNLKVASFNVLNYFNGDGLGGGFPTDRGADTPSEFARQRAKIISAMVSIDADIFGLM 518 Query: 73 EMGSY------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 E+ + + + + + + + I + Sbjct: 519 EIENDGFGTESAINDLVSGLNQAVGEARYQFISAPTPTIGTDAITVGMLYRSDRVRPVGA 578 Query: 121 VRVLQQSYPLLGAKDS--FSRAGNRRAV--ELLVEINGKKIWVLDIHLKSFCFL-----D 171 +VL + L + F+ NR ++ V + +++ V HLKS D Sbjct: 579 AKVLSSANSPLDEQGEVLFNDGKNRPSLTQAFEVLVEDQQLVVAVNHLKSKGSDCVSLGD 638 Query: 172 SLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 N +C+ ++ A L W+ + +P ++ GD N + + Sbjct: 639 PDLNDGQGNCNLTRTRAATALGAWLASEYGE-LPTLVIGDMNAYAKEDPID-----ALRG 692 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG- 289 L F S + +D+ + + ++ + I +E + Sbjct: 693 AGYLELFDHLGKSGAYSYVFSGETGQLDHALANTQLADRVVDVTEWHINTDEPRLLDYNE 752 Query: 290 ----------------KRLSDHCPISIDY 302 R SDH P+ I Sbjct: 753 EFKSAGQIESLYSSDAYRSSDHDPVVISL 781 >gi|119897775|ref|YP_932988.1| putative extracellular nuclease [Azoarcus sp. BH72] gi|119670188|emb|CAL94101.1| putative extracellular nuclease [Azoarcus sp. BH72] Length = 943 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 89/354 (25%), Gaps = 71/354 (20%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------------------TSDYTLL 57 +VA +++ S N+ R Sbjct: 478 AAPAVAGTLKVASINLLNYFNTFDGRPDTVDNCRYGLGGAPTDCRGADDGAEFERQAAKT 537 Query: 58 RQYAKNLDADIVFLQEMGSY-----NAVAKVFP------KNTWCIFYSTERLINHSKRDS 106 LDAD++ L E+ + +A+A + + + + Sbjct: 538 VAAILALDADVIGLMEVENDGYGADSALADLVGRLNAVAGPGAYAYLDADAAAGKANALG 597 Query: 107 NNDIHTAIAVRKKNV------RVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWV 159 + I T + R V + + ++ L + NR A+ +G + V Sbjct: 598 TDAIKTGLIYRPAKVTRLGTAVLDRGAFGLYTTVSEGTLGRNRPALAQSFRAADGARFTV 657 Query: 160 LDIHLKSF-----------CFLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFV 206 HLKS L + S A+ L W+ + Sbjct: 658 AVNHLKSKSSSCAGNIAPVPSDPDLGDGQGDCNRTRSTAARELAAWLATDPTAAGDGDVL 717 Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 I GD N + ++ + +D+ + + Sbjct: 718 IIGDLNAYAQEDPV-----TALTDAGYTDLVGRDVGRGAYSYVFDGQWGYLDHALASPSL 772 Query: 267 YKFLIQESFSEILYNEDDIKSRG-----------------KRLSDHCPISIDYD 303 + + + I +E + R SDH P+ I D Sbjct: 773 ARQVSGVAEWHINADEPSVLDYNTDYKSAAQIAGYYAADLYRASDHDPVVIGLD 826 >gi|294674281|ref|YP_003574897.1| endonuclease/exonuclease/phosphatase family protein [Prevotella ruminicola 23] gi|294473158|gb|ADE82547.1| endonuclease/exonuclease/phosphatase family protein [Prevotella ruminicola 23] Length = 293 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 37/314 (11%), Positives = 84/314 (26%), Gaps = 43/314 (13%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + + AQ++ + S+NI ++ + + +L DI Q Sbjct: 1 MAASITTQAQELYVGSYNIRYQNDGDAKAGNA-----WQQRMPVLCGQILFEHPDIFGAQ 55 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ + + H+ SN R K + + L Sbjct: 56 EVLESQRQDLLKQLTDYDCIGLGRDDGKHAGEHSNIFYD-----RNKIKLLDHGDFWLSE 110 Query: 133 AKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + + A R ++ G + +L L+ Q+ Sbjct: 111 TPEKPGLGWDAACVRICSWGYFKLKGTSLKFYYFNLHM---DHVGTVARREGAKLVVQRI 167 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + + P V+ GDFN + + + ++ + Sbjct: 168 KEIAK--------GKPVVLTGDFNVDQTNEIYGIFTQSGVLDDSFEKAQFRFAENGTFNS 219 Query: 249 KNLRNK--IPIDYFVMDQNAYKF---LIQESFS-------------EILYNEDDIKSRGK 290 + K ID+ + ++ ++ + + K + + Sbjct: 220 WDPELKTASRIDHVFVSPAFTVQRYGVLTNTYWSEAPQQTDTVKGADAPQEINFQKHQKR 279 Query: 291 RLSDHCPISIDYDF 304 SDH P+ + F Sbjct: 280 LPSDHYPVFVRLTF 293 >gi|91215919|ref|ZP_01252888.1| extracellular nuclease [Psychroflexus torquis ATCC 700755] gi|91185896|gb|EAS72270.1| extracellular nuclease [Psychroflexus torquis ATCC 700755] Length = 1215 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 90/331 (27%), Gaps = 42/331 (12%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + V +++ S+N+ ++ + + L+ADIV L E Sbjct: 793 IASPEDVGGSLKVASFNVLNYFTTLNERGANSTAELDRQR-EKIAAAICGLNADIVGLIE 851 Query: 74 MGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKKNVRVL-QQSYP 129 + + A+ + + D A V + + Sbjct: 852 IENNGTTALDDLLNGPNGINTLCGTTYVAVDAGVIGTDQIAVAFIYNTATVSLEGTHAIL 911 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK-----SFCFLDSLENTYSPSCS-L 183 F+ NR A+ + + + + S C D N + +C+ Sbjct: 912 DASVDPRFNDNKNRPALAQTFKEISTEGILTIVVNHLKSKGSSCSGDQDLNDGAGNCNLT 971 Query: 184 LSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK-- 239 ++ A L DW+ ++I GD N ++ + D + F Sbjct: 972 RAEAASALVDWLATDPTDSGDSDYLIIGDLNSYQKEDPIDNILLGSDDIEGTTDDFTDLI 1031 Query: 240 --EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------- 289 + +DY + N + + + I +E + Sbjct: 1032 ADYQGQDGYGYVFDGQLGNLDYALATDNLAEQITGTTVWHINADEISLFDYNDDIQDSSE 1091 Query: 290 -----------------KRLSDHCPISIDYD 303 R SDH P+ + D Sbjct: 1092 ASFQRESSALPIYEANAFRASDHDPVLLGLD 1122 >gi|121593606|ref|YP_985502.1| exodeoxyribonuclease III Xth [Acidovorax sp. JS42] gi|120605686|gb|ABM41426.1| exodeoxyribonuclease III Xth [Acidovorax sp. JS42] Length = 258 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 86/301 (28%), Gaps = 70/301 (23%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + +WNIN+LS + + + D + LQE+ K+ Sbjct: 3 IATWNINSLS----------------VRLPQVLAWLEANPVDAIGLQEL-------KLVD 39 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + + + +A+ + + G D +R Sbjct: 40 E---KFPHDAFEAAGYHAVCFGQKTYNGVAILSRTPLRDVVRN-IPGHGDEQAR-----V 90 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + ++ + +++ + + + + +Y + L+DW+ + + Sbjct: 91 IAATLDTPEGPLRLVNCYFVNGQAPGTEKFSYK------LLWLEALRDWLRTELAAHPRL 144 Query: 206 VIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNANKN 250 V+ GDFN + D ++ + F + D + Sbjct: 145 VLVGDFNVAPEDRDSFDPVGLKDTIHHTVEERQHFQDLLGLGLTDAF-RLFDQPEKSYSW 203 Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 ++ ID+ ++ + D + + SDH P+ + Sbjct: 204 WDYRMLGFQKNRGLRIDHILVSAALRPSVTAC-------RIDRAPRKNPQPSDHAPVVVS 256 Query: 302 Y 302 Sbjct: 257 L 257 >gi|299141468|ref|ZP_07034604.1| endonuclease/exonuclease/phosphatase family protein [Prevotella oris C735] gi|298576804|gb|EFI48674.1| endonuclease/exonuclease/phosphatase family protein [Prevotella oris C735] Length = 299 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 88/305 (28%), Gaps = 29/305 (9%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +++ + ++ L CT +AQ + + S+NI + + ++ + +R L + Sbjct: 17 MKRTTVFIIALLFTCTL-MAQPLYVGSYNIRY-NVSDDIAEGNSWKQR----CPHLCDFI 70 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 I QE+ + + + + + + + + Sbjct: 71 NFEQPVIFGAQEVLADQLHDLLQGLDNYGYIGVGREDGKEAGEYAAIFYKKDLLKLLDSG 130 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSP 179 P + + A R + + K + + H+ Sbjct: 131 YFWLSETPEKPST-GWDAACIRICTWGKFQDKASKKTFYFFNTHM-----DHVGAVARRE 184 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 S L+ Q+ + L ++ GDFN + + + Sbjct: 185 SARLIIQRMKEL--------TGGKHTILTGDFNANQTDESYKMFSESGFLHDCYVNAHQR 236 Query: 240 EKDSRCNANK--NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + + ID+ + ++ + I N + + +SDH P Sbjct: 237 MAPAGTWNDYMQDCPGMARIDHIFVTKDF-----DINHYGIFTNSYWLGKTRRNISDHYP 291 Query: 298 ISIDY 302 + + Sbjct: 292 VMVKL 296 >gi|160890835|ref|ZP_02071838.1| hypothetical protein BACUNI_03280 [Bacteroides uniformis ATCC 8492] gi|317479733|ref|ZP_07938855.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] gi|156859834|gb|EDO53265.1| hypothetical protein BACUNI_03280 [Bacteroides uniformis ATCC 8492] gi|316904103|gb|EFV25935.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] Length = 287 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 77/294 (26%), Gaps = 37/294 (12%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A + V ++S+NI + ++ + W+ R + D DI+ QE+ Sbjct: 23 APAPEPVNVMSFNIRYDNPEDSLDNWQYRKDRA-------ANAIRFYDVDILGTQEVLHN 75 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + S + P + + Sbjct: 76 QLEDLKQRLPEYGVIGVGREDGKEKGEYSALWYKKDRFNLLDSGYFWLSETPEVAGSKGW 135 Query: 138 SRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 A R A + +++GK+ + L+ HL SL+ + L Sbjct: 136 DGACERIASWAKLQDKVSGKEFFALNTHL-----DHVGVAARREGISLMLDKVNEL---- 186 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRFPKEKDSRCNANKNL 251 +P V+ GDFN + + + + Sbjct: 187 ----SGNLPVVVTGDFNASPESDVIKHVTDPSNPEHLTDARQASAIVYGPAWSFHDFGKI 242 Query: 252 RNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY + + Y LSDH PI + + Sbjct: 243 PYDKRPLIDYVFVRNGL---------KVLRYGVLAETENNAFLSDHAPILVTVE 287 >gi|261406650|ref|YP_003242891.1| endonuclease/exonuclease/phosphatase [Paenibacillus sp. Y412MC10] gi|261283113|gb|ACX65084.1| Endonuclease/exonuclease/phosphatase [Paenibacillus sp. Y412MC10] Length = 272 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 49/323 (15%), Positives = 99/323 (30%), Gaps = 73/323 (22%) Query: 2 IRKYVLALVFFLVPCTASVAQKV------------RLVSWNINTLSEQEGVSLWKNSVKR 49 ++K +++L+ L + ++S+NI+ +G Sbjct: 1 MKKSLISLIACLFIIPLFATGVMAAGKGQGKEVSTTVMSYNIHHGVGIDG---------- 50 Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSY--------NAVAKVFPKNTWCIFYSTERLINH 101 + ++ A+IV LQE+ + + ++ + Y + Sbjct: 51 -QLSLQRIADVIRDSGAEIVGLQEVDRHYGERSDFKDQAKELADLLGYHYAYGANLDLEP 109 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 + +NN + A+ K + ++ L R + +V + G + V + Sbjct: 110 GEGQTNNRQY-GTAIVSKYPILRSENTWLSSFG-----KEQRGVLHAVVNLRGIHVDVYN 163 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 HL + + QAQ + I S P ++ GDFN + + Sbjct: 164 THLGL-------------DVTSRTAQAQEI---IDLASSSQGPALLMGDFNAEPDSSEF- 206 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + N L E + IDY + N ++ + Sbjct: 207 -----QLLLNSGLFVNSFEGIDDAYTFPVINPSATIDYILTSPNVRH------ANQRVIQ 255 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 + SDH PI+ D F Sbjct: 256 TE--------ASDHLPIAADVVF 270 >gi|221066056|ref|ZP_03542161.1| exodeoxyribonuclease III Xth [Comamonas testosteroni KF-1] gi|220711079|gb|EED66447.1| exodeoxyribonuclease III Xth [Comamonas testosteroni KF-1] Length = 258 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 92/304 (30%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+LS + ++ D + LQE+ + Sbjct: 1 MKIATWNVNSLS----------------VRLPQVLEWLAANPVDALGLQELKLTDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ + +A + + G D +R Sbjct: 41 ------KFPHMAFQEAGYTAVSHGQKTYNGVAWITRETGRDVVRN-IPGLDDEQAR---- 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ ++ +++ + + S + Y + Q L+DW+ ++ Sbjct: 90 -IIATTIDSPAGEVRLINGYFVNGQEPGSEKFAYK------MRWLQALQDWVKEQMALHP 142 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN + D ++ + F + + + Sbjct: 143 RLVLVGDFNVAPEDRDSYDPVGLKDTIHHTVQERDHFQRLLQLGLSDAF-RMFEQPEKSY 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ++ ID+ ++ + + S D + K+ SDH P+ Sbjct: 202 SWWDYRMLGFQKNRGLRIDHILVSEALRSKVSACSV-------DRAPRKNKQPSDHAPVI 254 Query: 300 IDYD 303 + D Sbjct: 255 VTLD 258 >gi|76818418|ref|YP_336092.1| extracellular nuclease [Burkholderia pseudomallei 1710b] gi|76582891|gb|ABA52365.1| Extracellular nuclease [Burkholderia pseudomallei 1710b] Length = 514 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 94/315 (29%), Gaps = 47/315 (14%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ N + + + R +Y + K LDAD++ L E+ Sbjct: 184 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIE 243 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + + S R + I A+ + V+ P+ A Sbjct: 244 NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVK------PIGNAA 297 Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186 NR+ + + + V HLKS D+ + + S+ Sbjct: 298 TLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSR 357 Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A + DW+ + ++ GD N +T++ + + S Sbjct: 358 AAAKIADWLARNPTGAPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKVGSG 412 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287 + +D+ + + I +E Sbjct: 413 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAP 472 Query: 288 RGKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 473 DAYRSSDHDPVLIDI 487 >gi|330824047|ref|YP_004387350.1| exodeoxyribonuclease III Xth [Alicycliphilus denitrificans K601] gi|329309419|gb|AEB83834.1| exodeoxyribonuclease III Xth [Alicycliphilus denitrificans K601] Length = 258 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 80/301 (26%), Gaps = 70/301 (23%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L +WNIN+LS + + D + LQE+ K+ Sbjct: 3 LATWNINSLS----------------VRLPQVLAWLVANPVDAIGLQEL-------KLVD 39 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + + + +A+ + R Sbjct: 40 E---KFPHDAFEAAGYHAVCFGQKTYNGVAIVSRTPPRDVVRNI------PGHDDEQARV 90 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + +++ G + +++ + + + + Y Q L DW+ + + Sbjct: 91 IAATLDVEGGPLRLVNCYFVNGQAPGTDKFAYK------LQWLAALHDWLRAELAAHPRL 144 Query: 206 VIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNANKN 250 V+ GDFN + D ++ + F + + + Sbjct: 145 VLVGDFNVAPEDRDSYDPVGLKDTIHHTVEERQHFRQLLELGLTDAF-RMFEQPEKSYSW 203 Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + ID+ ++ + + D + + SDH P+ Sbjct: 204 WDYRQLGFQKNRGLRIDHILVSEALRAGVTAC-------RIDRAPRKNPQPSDHAPVVAT 256 Query: 302 Y 302 Sbjct: 257 L 257 >gi|149277549|ref|ZP_01883690.1| hypothetical protein PBAL39_05158 [Pedobacter sp. BAL39] gi|149231782|gb|EDM37160.1| hypothetical protein PBAL39_05158 [Pedobacter sp. BAL39] Length = 278 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 85/303 (28%), Gaps = 32/303 (10%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M K +L F L+ C AQ + + ++N+ ++ + +LW + Sbjct: 1 MKLKLLLFSAFTLMTCLGLQAQSLTIGTFNLRYDTKSDTGNLWVDRAPIA-------ANL 53 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + D++ +QE + + S + K Sbjct: 54 IRFHGFDVLGVQEGLINQINDLSKALPEYERAGVGRDDGKEAGEHSAIYYRSDRFKLLKK 113 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYS 178 P K NR + ++ K +V + H Sbjct: 114 GDFWLSETPDKPGKGWDVTCCNRICSWVYLQDMSTKKSFYVFNAHFDH------------ 161 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI-DPNDSLIRF 237 + + A+ + I + P + GD N + S +++ Sbjct: 162 QAVIARQESAKLILRKINEIAG-NSPALFMGDLNGSRTSEWYLALANSGLIKDVHSAVKY 220 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 P E + N K + ID+ M + ++ + GK SDH P Sbjct: 221 PYENNGSSNGFKIPKGMGVIDHIFMSKQFTAQ-KWGILTDTYF--------GKYPSDHFP 271 Query: 298 ISI 300 + Sbjct: 272 VLA 274 >gi|218709697|ref|YP_002417318.1| putative phospholipase C precursor [Vibrio splendidus LGP32] gi|218322716|emb|CAV18892.1| putative phospholipase C precursor [Vibrio splendidus LGP32] Length = 444 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 88/296 (29%), Gaps = 36/296 (12%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 A ++++++NI L Y L+ QY K D++ LQE+ + Sbjct: 174 PEPDANTLKVITYNIWALPAIASHIGD---------RYDLIPQYVKGY--DVLALQEVFA 222 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + + + I I R V Q +P D Sbjct: 223 NGRDEFLRELAKEYPYQTKMLDKDGINIYDGGVI---IVSRYPIVNEAQYVFPDCTGTDC 279 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 F+ V NG+ V H SF + + +Q + L + Sbjct: 280 FADK---GVNYAEVIKNGQAYHVFGTHTASFDTDTARDYRQRQ-----FKQMRALAQSLN 331 Query: 197 QKKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---- 251 V +GDFN + + + + + + + S + N Sbjct: 332 IPASET--VVYSGDFNVNKLKFPDDYQQMFANLQADKPT--YSGYTASTFDPRINNFAGE 387 Query: 252 -----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +DY V+ ++ ++ + + LSDH P+S Sbjct: 388 PMSGGENVEYLDYVVVSSEYAAKAHNDNRVDVPRSTSSELWKHYNLSDHFPVSAVI 443 >gi|154491719|ref|ZP_02031345.1| hypothetical protein PARMER_01330 [Parabacteroides merdae ATCC 43184] gi|154087960|gb|EDN87005.1| hypothetical protein PARMER_01330 [Parabacteroides merdae ATCC 43184] Length = 287 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 89/310 (28%), Gaps = 41/310 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQ----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 ++K + L L+ A+ ++ ++S+NI ++ +G + L Sbjct: 1 MKKVLFYLFTLLISTNIVFAEHLDNEMNVMSFNIRMSTKSDGAN-------WWEYRKDLA 53 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 K D D+ QE+ + + S Sbjct: 54 ANVIKFYDVDMFGAQEVLHNQLTDLLDRLPDYGYVGVGREDGKTKGEYSPILYRKDRFSV 113 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLEN 175 K+ K + A R A + + +GK+ + L+ HL + Sbjct: 114 VKSGNFWLAEDMNAVGKKGWDAACERVATWAIFKDKKSGKEFFFLNTHL-----DHMGQV 168 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPN 231 SL+ +Q + L +P ++ GDFN + + Sbjct: 169 ARHEGASLVLKQVKLLSR--------NLPVIVTGDFNAVPTDDPIKVLTDEKDPRHLTHA 220 Query: 232 DSLIRFPKEKDSRCNAN--KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 +L + + L ++ IDY + N + + Sbjct: 221 RTLAPLCYGPEWTFHDYGRVPLDERVWIDYIFVKGN---------VKVLRHGVLAESLDN 271 Query: 290 KRLSDHCPIS 299 SDHCP+ Sbjct: 272 LYPSDHCPVI 281 >gi|330960959|gb|EGH61219.1| exonuclease III [Pseudomonas syringae pv. maculicola str. ES4326] Length = 270 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 36/312 (11%), Positives = 83/312 (26%), Gaps = 74/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L + D++ LQE + Sbjct: 1 MKIVSFNINGL----------------RARPHQLAALIEKHQPDVIGLQETKVSDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + + H +A+ +N + G + A R Sbjct: 41 ------QFPHADIEALGYHVHFHGQKGHYGVALLSRNPPLELHK----GFEGDNEDAQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + NG+ I +++ F + + + L+ + + + Sbjct: 91 FIRGAYADSNGQPIIIMN-----GYFPQGESRDHPTKFPAKQRFYEDLQQLLESRFSNEQ 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 P ++ GD N ++L ++ + + + F Sbjct: 146 PLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGMVDSFRYLHP 205 Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + + D ++ Sbjct: 206 EVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKAAGV-------DYDLRGMEK 258 Query: 292 LSDHCPISIDYD 303 SDH PI ++ Sbjct: 259 PSDHAPIWLELS 270 >gi|325914373|ref|ZP_08176720.1| putative extracellular nuclease [Xanthomonas vesicatoria ATCC 35937] gi|325539381|gb|EGD11030.1| putative extracellular nuclease [Xanthomonas vesicatoria ATCC 35937] Length = 572 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 88/324 (27%), Gaps = 35/324 (10%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60 L L V +R+ S+N+ G + ++ + + L Sbjct: 256 LTLPAMPTAVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLSKLVAT 315 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIA 115 L AD+ L E+ + A + + ++ + ++ I + Sbjct: 316 IVPLQADVAALMELENDGDGADAAVAQLVAALNAAGKDKDWQFVDTANGPGDDAIRVGMI 375 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKS-FCFLDSL 173 R V + + L G +R + N G V+ H KS C S Sbjct: 376 YRNSQVTPVGKPATLTGGPFDSH---SRVPLAQAFRSNRGATFVVVANHFKSKGCGNASG 432 Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWK 226 + A+ L W+ V+ GDFN Sbjct: 433 ADADQQDGQACWNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYAMETPMRS---- 488 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + + F + + +D+ ++ K L + + D Sbjct: 489 -LRASGWQDAFAVAGVKQPYSYVYDGMSGRLDHALLSPAMAKQLRGAVEWHVNADAMDDA 547 Query: 287 SRG-------KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 548 GYAKRNLPGPWRSSDHDPVLLGFS 571 >gi|301162321|emb|CBW21866.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides fragilis 638R] Length = 285 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 38/316 (12%), Positives = 84/316 (26%), Gaps = 43/316 (13%) Query: 1 MIRKYVLALVFFLVPCTASVAQKV---RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 M + VF + + + R+ ++NI + + ++ WK + Sbjct: 1 MNKICFFIGVFITLLLAGCSSNPITHVRVATFNIRYDNPGDSLNSWKYRK-------EKV 53 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 ++ + D++ +QE+ ++ + + + Sbjct: 54 CEFIREKHPDVLGMQEVLNHQLKDLLSGLPDYAYVGVGREDGKTQGEYAPVFYRKDKYDL 113 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLEN 175 + +P K + A R A ++ GK+ +L+ H F Sbjct: 114 LDSNTFWLSEHPDSIGKLGWDAACTRVATWAKLKDKTTGKEFLMLNTH-----FDHVGTE 168 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 S L+ + + + P ++ GDFN + D+ Sbjct: 169 ARRNSALLIIDKIKEIA--------GTHPAMMTGDFNVSEEWEAYKTITSNEFVLKDAWK 220 Query: 236 RFPKEKDSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 K+ + ID+ + + Sbjct: 221 IAGKQSGEN---YTFHDFGRVPVAEREKIDFIFVTPQIKVA--------DAEIISSAITD 269 Query: 289 GKRLSDHCPISIDYDF 304 LSDH D +F Sbjct: 270 STYLSDHNAHLADLEF 285 >gi|307308162|ref|ZP_07587877.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti BL225C] gi|306901365|gb|EFN31970.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti BL225C] Length = 265 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 40/284 (14%), Positives = 81/284 (28%), Gaps = 49/284 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 Q++R +++N+++ + D + D++ LQE+ A Sbjct: 19 QRIRFLTYNVHSCFGTDR-----------RLDPARIAAVIAECQPDVIALQEVDVGRART 67 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + H D AV L ++ PL + Sbjct: 68 GGIDQAHMIATHLNMEAEFHP-ALHLEDEKYGDAVLTALPMRLIKAAPLPSSG------E 120 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKK 199 R A+ + +++ K+ V+ HL + +QA L W+ Sbjct: 121 PRGALWVEIDVAAVKLQVIVTHLGLRG-------------AERLRQATALLGPGWLGGMA 167 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 V+AGD N + + L + + ID+ Sbjct: 168 HGDAHVVLAGDLNAT-GRSTAYRLLARQLSDAQLLTGA-----KPRPTFPSRLPLLRIDH 221 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + S + + SDH P+ + D Sbjct: 222 VLIGKGIEV----ASCRVH------GSTLARSASDHLPLLAELD 255 >gi|57235078|ref|YP_180859.1| endonuclease/exonuclease/phosphatase family protein [Dehalococcoides ethenogenes 195] gi|57225526|gb|AAW40583.1| endonuclease/exonuclease/phosphatase family protein [Dehalococcoides ethenogenes 195] Length = 591 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 86/288 (29%), Gaps = 54/288 (18%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + +R++++N++ +G D L + ++ AD+V LQE+ Sbjct: 355 PAAPQFSGTLRIMTYNLHNGFNTQG-----------KLDLEALARVIEDSGADVVALQEI 403 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 ++ W +RL H + + A+ K + + L Sbjct: 404 SRGWVISGRVDMLEWL----AQRLNMHFAFGATAGEYWGNAILSKYPILDTHNVSLESEG 459 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R + ++++ + +++ HL + QA+ L D+ Sbjct: 460 LPIK----RGYLNAVLDLGVRYLYLAATHLHHVP----------EEGEVRVIQAEELADF 505 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + VI GDFN + + + + +L Sbjct: 506 WHHAPST----VIMGDFNAEPDSAEI-----AILRQAGFSDSLEGQTSVLTYHAADLY-- 554 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IDY + +S++ SDH I D Sbjct: 555 QRIDYIWASPDIE---YLDSYTVFSL-----------ASDHLAIIADI 588 >gi|315128102|ref|YP_004070105.1| hypothetical protein PSM_A3040 [Pseudoalteromonas sp. SM9913] gi|315016615|gb|ADT69953.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913] Length = 887 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 89/317 (28%), Gaps = 41/317 (12%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ------YAKNLDADIVFLQEMGS 76 +R+ S+N+ +G + + S+ L+RQ + AD++ L E+ + Sbjct: 460 DLRVASFNVLNYFNGDGQGSGFPTSRGADSEVELIRQQAKLVSAISAMQADVIGLMEIEN 519 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG---A 133 + + ++ D D A+ + + + Sbjct: 520 DGFGEFSAVASLVNALNDADSQNQYAFVDFGVDKIGTDAITTALIYRADKVQQVGTAAIT 579 Query: 134 KDSFSRAGNRRAVELLVEINGKK----IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 D+ NR + + + + V + K C + N + + Sbjct: 580 TDAPFDYSNRAPIAQSFKSLETEEVFTVAVAHLKSKGGCGSATGGNADQNDGQACWNEIR 639 Query: 190 -----WLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 DW+ K ++ GD N K + + + + Sbjct: 640 TAGANAFADWLNSKPTGVDDEDIILVGDMNAYAMEDPIRAFADKGLKN----VVAELDGN 695 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------------- 289 + + +D+ ++ + ++ + I +E Sbjct: 696 TLGYSYSFSGRAGSLDHALVSPSLLNKVVSATDWHINADEPISLDYNVEFKSDAQQSTLY 755 Query: 290 ----KRLSDHCPISIDY 302 R SDH P+ +D Sbjct: 756 AQGPYRASDHDPVIVDI 772 >gi|152974395|ref|YP_001373912.1| sphingomyelin phosphodiesterase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023147|gb|ABS20917.1| Sphingomyelin phosphodiesterase [Bacillus cytotoxicus NVH 391-98] Length = 330 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 52/338 (15%), Positives = 109/338 (32%), Gaps = 47/338 (13%) Query: 1 MIRKYVLALVFFL------VPCTASVA------QKVRLVSWNINTLSEQEGVSLWKNSVK 48 M++ +L + + +++ A ++++ N+ LS L+ N + Sbjct: 1 MMKSKLLKGILSFGIGLTALYSSSAQAETSSDSDTFKIMTHNVYMLSTN----LYPNWGQ 56 Query: 49 RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCI---------FYSTERLI 99 + +D Y K + D+V L E+ A + Sbjct: 57 KERADLIGEANYIK--NQDVVILNEVFDNKASDSLLQNLKKEYPNQTAVLGRVNGDMWDQ 114 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 S +A+ K V + Y N+ V ++ + + I V Sbjct: 115 TLGNYSSVAPEDGGVAIVSKWPIVEKVQYVFQKGCGP-DNLSNKGFVYTKIKKDDRFIHV 173 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKI--- 215 + HL++ D+ SPS S+ + Q + ++++I + S VI GD N Sbjct: 174 IGTHLQA---EDNQCGNISPS-SVRTNQLKEIQEFIQKKNIPSDEYVVIGGDMNVNKINS 229 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKD-SRCNANKNLRNK----IPIDYFVMDQNAYKFL 270 N+ + +KT+ + + N+ +DY V ++ Sbjct: 230 NHTSEYESMFKTLHASVPSYTGHTATWDATTNSIAKYNFPEAPAEYLDYIVTSKDHATPT 289 Query: 271 IQESFSEILYNEDDIKSRGKR------LSDHCPISIDY 302 E+ + + + + SDH P+ Sbjct: 290 YLENKVLQPKSPEWSVTSWFKTYTYNDYSDHYPVEATI 327 >gi|325929159|ref|ZP_08190302.1| metal-dependent hydrolase [Xanthomonas perforans 91-118] gi|325540478|gb|EGD12077.1| metal-dependent hydrolase [Xanthomonas perforans 91-118] Length = 287 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 41/282 (14%), Positives = 80/282 (28%), Gaps = 33/282 (11%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 R++S+N+ V + KR + K D+ QE+ S A Sbjct: 35 RVMSFNVR-------VPADTDGDKRWQVRRAAMVALIKQTHPDVFGTQELVSEQAAFLAE 87 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + F R + + + ++ P ++ R Sbjct: 88 QLPDYRWFGQGRRGDDSDEHM-GVFYDARVLKVVESGNFWLSDTPERAGSITWGNVLPRM 146 Query: 145 AVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 A L E + ++ ++ + H D E S L+ + L + Sbjct: 147 ATWALFERRSDKRRFYLFNTHFPYR---DEDEPARERSARLILSRIAQL--------PAT 195 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 VP V+ GDFN + + + + + ID+ + Sbjct: 196 VPVVLTGDFNSDPD--KITYPTLTAVLRDARAQASKRSGPENTFQDFTTHPTRRIDWILY 253 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + D + G SDH P+ ++D+ Sbjct: 254 RG----------LRPTRFATLDDRPGGILPSDHYPVMAEFDW 285 >gi|168698628|ref|ZP_02730905.1| hypothetical protein GobsU_03844 [Gemmata obscuriglobus UQM 2246] Length = 290 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 44/318 (13%), Positives = 87/318 (27%), Gaps = 44/318 (13%) Query: 1 MIRKYVLALVFFLVP---CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 M R L L + VR++S+NI + ++G + W L Sbjct: 1 MHRFLYLLLAAIGLAPAVNAQPPKGDVRVMSFNIRYGTAKDGENHWDKRK-------EFL 53 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 K D++ QE + + + A + Sbjct: 54 ADTVKAFGPDLLGTQETLIFQRDFLSQKLTGYEGLGVGREDGKEKGETTALYWRKARFEK 113 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSL 173 P + S+ + R A + + + N K + ++ H F Sbjct: 114 TDGGHFWLSETPNVAGSKSWDSSLPRMATWVKLKDLAKPNAKPVLFVNTH-----FDHIG 168 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN-- 231 + L+ + L + V+ GDFN + F Sbjct: 169 KKARIEGAKLIRDRIGAL--------GAGCSVVVTGDFNSGEDSEPYRTLFAARDKNESP 220 Query: 232 --DSLIRFPKEKDSRCNANKNLR----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 DS +++ N + ID+ + ++ ++ D Sbjct: 221 VMDSFRAAHPKREPNEGTFTNFKAGPVKGDRIDWIGVSRD---------WTVTGAGIDRT 271 Query: 286 KSRGKRLSDHCPISIDYD 303 + G+ SDH P++ Sbjct: 272 EKDGRTPSDHFPVTATLS 289 >gi|167573681|ref|ZP_02366555.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia oklahomensis C6786] Length = 614 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 93/315 (29%), Gaps = 47/315 (14%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ N + + + R +Y + K L+AD++ L E+ Sbjct: 284 LRVASFNVLNYFNGDGTGGGFDDPNNRGAKNYDEFVRQDAKIVSALKALNADVIGLMEIE 343 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + R+++ R + I A+ + V+ P+ A Sbjct: 344 NDGYGELSAVRQLAAKLGDGWRVVDPGIARLGGDAISVALIYDSRKVK------PVGEAA 397 Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186 NR+ + + + V HLKS + + + ++ Sbjct: 398 TLAIDDKNRQPLAQTFRPVGGSRAVTVAVNHLKSKNCPSATGDDLDQGDGQGCWNATRTR 457 Query: 187 QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A + DW+ + ++ GD N +T++ + + + Sbjct: 458 AASKVADWLARTPTGVPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKIGAG 512 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287 + +D+ + + I +E Sbjct: 513 AYSYVYNGEAGYLDHALASSALASRVKAVHDWHINADEPIALQYTLAYKTAEQQRTYYAP 572 Query: 288 RGKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 573 DAYRSSDHDPVLIDI 587 >gi|78778870|ref|YP_396982.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9312] gi|78712369|gb|ABB49546.1| Exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9312] Length = 281 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 44/301 (14%), Positives = 92/301 (30%), Gaps = 63/301 (20%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + +WN+N + + + + ++ DI+ LQE KV Sbjct: 3 IATWNVN----------------SIRTRLSQIIDWMNQVNPDILCLQE-------TKVMD 39 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + + +S + +A+ K + G DS A Sbjct: 40 NS---FPFEPFEKLGYSVEVYGQKAYNGVAIISKIKAENVKKG-FYGCSDSDQNAEIFLD 95 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + L+ + I ++++++ + L+S + Y L ++ ++++ Sbjct: 96 QKRLISADINGIKIINVYVPNGSSLESNKFEYK------INWLSSLASYLDEQEKKGELI 149 Query: 206 VIAGDFNRKINYLGNNDD-------FWKTIDPN-------DSLIRFPKEKDSRCNANKNL 251 + GDFN + L D I+ N + LI + + Sbjct: 150 CLMGDFNVAPSNLDIYDPKKYEGGIMASEIERNALNNVLKERLIDSFRIFEKNPGHWSWW 209 Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ + + L D R SDH P+ ID Sbjct: 210 DYRNNAYELNKGWRIDHIYISKELSSKLKSCVI-------DSSPRANLRPSDHAPVMIDL 262 Query: 303 D 303 + Sbjct: 263 N 263 >gi|15599104|ref|NP_252598.1| Extracelullar DNA degradation protein, EddB [Pseudomonas aeruginosa PAO1] gi|9950092|gb|AAG07296.1|AE004808_6 Extracelullar DNA degradation protein, EddB [Pseudomonas aeruginosa PAO1] Length = 779 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 99/329 (30%), Gaps = 45/329 (13%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWK------NSVKRTTSDYTLLRQYAKNLDADI 68 P +V ++R+ S+N+ +G N+ + + ADI Sbjct: 445 PAQPAVEGRLRVASFNVLNYFNGDGKGGGFPTSRGANTAEEFQRQKAKIVAAILASKADI 504 Query: 69 VFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRD--SNNDIHTAIAVRKKNV 121 V L E+ + +A+A + + + R +++I + R V Sbjct: 505 VGLMEIENDGYGEFSAIADLVNGLNASLPQGQRYAFVNPNRAKLGSDEIAVGLIYRGDKV 564 Query: 122 RV-LQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSF---CFLDSLEN 175 R + F NR + + G+++ + HLKS C D Sbjct: 565 RTYRSAAVLDSSVNPEFDDTRNRPTLAQTFQEINGGERLTIAVNHLKSKGSACDGDPDTG 624 Query: 176 TYSPSCS-LLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 +C+ ++ AQ L W+ +I GD N N I Sbjct: 625 DGQGNCNLTRARAAQALVGWLAGDPTGAKEPDRLIIGDLNSYAKEDPVN-----VIRSAG 679 Query: 233 SLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-- 289 ++ + + +D+ + + + + + I +E + Sbjct: 680 YTDLVARQAGAGKGYSYVFSGQSGYLDHALANASLARQVRGAVEWHINADEPRVLDYNVE 739 Query: 290 ---------------KRLSDHCPISIDYD 303 R SDH P+ I D Sbjct: 740 FKTPRQQDSLYNAEPYRASDHDPVVIGID 768 >gi|270295395|ref|ZP_06201596.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270274642|gb|EFA20503.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 283 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 84/308 (27%), Gaps = 43/308 (13%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 ++A V + C KV ++S+NI + +S+ Q Sbjct: 8 SVLVAFVLLVASCGKQPEAKVEVMSFNIR-------LDHVADSMNNWKYRKDNAAQMIAY 60 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 DIV +QE+ + + T KN Sbjct: 61 YAPDIVGMQEVVKNQLNDLKERLPQYTALGVGRADGKEKGEYCSLFYKTERFELLKNGDF 120 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 P K + A R ++ +++G+K+ + H F E S Sbjct: 121 GLSETPDSIGKKGWDAACERIVTWAVLKDKVSGRKVAAFNTH-----FDHVGEVARRESA 175 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 L+ ++ + + + P +I GDFN ++ + K Sbjct: 176 KLILEKIKQIAGEL--------PVIITGDFNGTVDSEPV-----TILTEGGMRNACSTAK 222 Query: 242 DSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + ID+ ++ S Y K LSD Sbjct: 223 VVYGPTWSFHDFGRIPVEKRRLIDFIFVN---------ASVEVERYRTVGDKPDNGYLSD 273 Query: 295 HCPISIDY 302 H P+ + Sbjct: 274 HAPVLVTL 281 >gi|289664940|ref|ZP_06486521.1| nuclease [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 572 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 87/324 (26%), Gaps = 35/324 (10%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60 L+L V +R+ S+N+ G + ++ + L Sbjct: 256 LSLPAMPTAVAPQVGGNLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 315 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIA 115 L AD+ L E+ + A + + I+ + I I Sbjct: 316 IVPLGADVAALMELENDGDGADAAVAQLVAALNAAGKDKDWQFIDTGSGPGEDAIRVGIV 375 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKS-FCFLDSL 173 R V + + L G +R + G V+ H KS C S Sbjct: 376 YRSSQVTPVGKPATLTGGPFDNH---SRVPLAQAFRSTRGATFVVVANHFKSKGCGNASG 432 Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWK 226 + A+ L W+ V+ GDFN + Sbjct: 433 ADADQQDGQACWNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYAMEMPMRS---- 488 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + + F + + +D+ ++ K L + I + D Sbjct: 489 -LRASGWQDAFAVAGVKQPYSFVYDGMSGRLDHALLSPAMAKQLRGAAEWHINADVMDAA 547 Query: 287 SRG-------KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 548 GYAKRNLPGPWRSSDHDPVLLGFS 571 >gi|299530483|ref|ZP_07043903.1| exodeoxyribonuclease III Xth [Comamonas testosteroni S44] gi|298721459|gb|EFI62396.1| exodeoxyribonuclease III Xth [Comamonas testosteroni S44] Length = 258 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 88/304 (28%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+LS + + D + LQE+ + Sbjct: 1 MKIATWNVNSLS----------------VRLPQVLDWLAANPVDALGLQELKLTDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A ++ + G D +R Sbjct: 41 ------KFPHMAFEEAGYKAVSHGQKTYNGVAWITRDTGRDVVRN-IPGLDDEQAR---- 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ +I +++ + + S + Y + Q L DWI + Sbjct: 90 -IIATTIDSPNGEIRLINGYFVNGQEPGSEKFAYK------MRWLQALHDWIQNQMTLHP 142 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN + D ++ + F + + + Sbjct: 143 RLVLVGDFNVAPEDRDSYDPVGLKDTIHHTVEERDHFQRLLQLGLSDAF-RMFEQPEKSY 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ++ ID+ ++ + + S D + K+ SDH P+ Sbjct: 202 SWWDYRMLGFQKNRGLRIDHILVSEALKSKVSACSV-------DRAPRKNKQPSDHAPVV 254 Query: 300 IDYD 303 + + Sbjct: 255 VTLN 258 >gi|73748062|ref|YP_307301.1| endonuclease [Dehalococcoides sp. CBDB1] gi|73659778|emb|CAI82385.1| probable endonuclease [Dehalococcoides sp. CBDB1] Length = 639 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 88/288 (30%), Gaps = 54/288 (18%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P +R++++N++ +G D L + ++ AD+V LQE+ Sbjct: 403 PSPPQFEGSLRIMTYNLHNGFNTQG-----------KLDMEALARVIEDSGADVVALQEI 451 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 ++ W ++RL +S + + A+ K + + L + Sbjct: 452 SRGWVISGRVDMLEWL----SQRLNMYSAFGATAGEYWGNAILSKYPILDTHNVSLESEE 507 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R + ++++ G+ +++ HL + QA L D+ Sbjct: 508 LPIK----RGYLNAVLDLGGRYLYLAATHLHHVPEEGD----------VRLIQAGELADF 553 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + +I GDFN + + + E + + Sbjct: 554 WDNAPAT----IILGDFNAEPDSEEIGLLRQAGLSD-------SLEGQTSVLTYHSADLY 602 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IDY +++ + + SDH I D Sbjct: 603 QRIDYIWASPEI-EYIDSYTIVSL-------------ASDHLAIIADI 636 >gi|147668908|ref|YP_001213726.1| endonuclease/exonuclease/phosphatase [Dehalococcoides sp. BAV1] gi|146269856|gb|ABQ16848.1| Endonuclease/exonuclease/phosphatase [Dehalococcoides sp. BAV1] Length = 639 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 87/288 (30%), Gaps = 54/288 (18%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P +R++++N++ +G D L + ++ AD+V LQE+ Sbjct: 403 PSPPQFEGSLRIMTYNLHNGFNTQG-----------KLDMEALARVIEDSGADVVALQEI 451 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 ++ W ++RL +S + + A+ K + + L Sbjct: 452 SRGWVISGRVDMLEWL----SQRLNMYSAFGATAGEYWGNAILSKYPILDTHNISLESEG 507 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R + ++++ G+ +++ HL + QA L D+ Sbjct: 508 LPIK----RGYLNAVLDLGGRYLYLAATHLHHVPEEGD----------VRLIQAGELADF 553 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + +I GDFN + + + E + + Sbjct: 554 WDNAPAT----IILGDFNAEPDSEEIGLLRQAGLSD-------SLEGQTSVLTYHSADLY 602 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IDY +++ + + SDH I D Sbjct: 603 QRIDYIWASPEI-EYIDSYTIVSL-------------ASDHLAIIADI 636 >gi|110634038|ref|YP_674246.1| exodeoxyribonuclease III [Mesorhizobium sp. BNC1] gi|110285022|gb|ABG63081.1| Exodeoxyribonuclease III [Chelativorans sp. BNC1] Length = 262 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 84/302 (27%), Gaps = 67/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + L + + + DIV LQE+ S + Sbjct: 1 MKIATWNING----------------VKARIENLVHWLQEANPDIVCLQEIKSLDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ K D +R Sbjct: 41 ------QFPREPIEALGYHVETHGQKGFNGVALLSKLRFDEVSRGLPGNDGDEQARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + G + V ++L + + S + Y + L+ W ++ Sbjct: 92 --IEGVFSTEGGALRVASLYLPNGNPIASEKFAYKLA------WMDRLELWAKRRLMLEE 143 Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249 P V+AGD+N + + + N + + Sbjct: 144 PLVLAGDYNVIPEPADAKNPENWLGDALYQPESRQAFRRLCNLGFTDALRSATNEPGTYT 203 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A + S + ++ SDH P+ + Sbjct: 204 FWDYQAGAWQKNNGIRIDHLMLSPEAADRIASASVQKHT-------RAWEKPSDHVPVVV 256 Query: 301 DY 302 D Sbjct: 257 DL 258 >gi|167463375|ref|ZP_02328464.1| hypothetical protein Plarl_12581 [Paenibacillus larvae subsp. larvae BRL-230010] gi|322382169|ref|ZP_08056092.1| hypothetical protein PL1_2483 [Paenibacillus larvae subsp. larvae B-3650] gi|321153888|gb|EFX46246.1| hypothetical protein PL1_2483 [Paenibacillus larvae subsp. larvae B-3650] Length = 247 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 40/292 (13%), Positives = 88/292 (30%), Gaps = 56/292 (19%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---- 76 A + R+V++NI+ + + + Q + AD++ L E+ Sbjct: 4 AMEFRVVTFNIHHGRGTDR-----------KLNLDRIAQVIEKSQADVIALNEVDKYFSR 52 Query: 77 ----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + + + + + + S+ A+ + V +++ L Sbjct: 53 RSEYTDQLGWLSERLKLDGIFGAAKTNKVSEETDCMIREYGNALLSRFPIVDVKNHNLSV 112 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 R R +E+ + I G+ + + HL F+ S QA + Sbjct: 113 YPI---RLEGRALLEVTLLIGGQWLKLYVTHLSLTPFIQS-------------IQADMI- 155 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + + + P ++ GDFN K + C + R Sbjct: 156 --LNKIIDDHHPMILLGDFNTWPQSKLWRKVTAKL------TDVSHSFRKKPCLTFPSFR 207 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ +DY + + ++ + SDH P+ F Sbjct: 208 PRVRLDYIFIS------------HHFHISSAEVITEDPAASDHLPLIATLKF 247 >gi|284034341|ref|YP_003384272.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283813634|gb|ADB35473.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 272 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 91/310 (29%), Gaps = 64/310 (20%) Query: 7 LALVFFLVPCTASVA-----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 LA V ++P A+ + + + ++++NI+ + +GV D + Sbjct: 12 LAGVLMVLPTAAAASPRSDDRTLTVITYNIHHGAGVDGVL-----------DLERIATVI 60 Query: 62 KNLDADIVFLQEMGSY--------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 + A +V LQE+ ++ + A + + Y+ + + Sbjct: 61 EKSGAGVVGLQEVDNHWSERSNWVDQAAWLARRLKMHYRYAPNLDLPPLNPGEPRRQY-G 119 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 A+ + ++ L A R V++ G+++ + HL Sbjct: 120 TAILSRYPIKDFRNTLLPKAP----AGEQRGLAVATVKVRGQELRFANTHLTH------- 168 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + + +QAQ + + + S P ++ GD N Sbjct: 169 -----NNNAERLEQAQKVVEVL---AGSKQPTLLVGDLNAAATTPEIQKLTAIW------ 214 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 +P+ N IDY + + S Sbjct: 215 RDTWPQVGVGPGNTISAENPTARIDYLLHSAALRPTSASVPATL--------------AS 260 Query: 294 DHCPISIDYD 303 DH P+ + Sbjct: 261 DHLPVVATFT 270 >gi|254469887|ref|ZP_05083292.1| exodeoxyribonuclease III [Pseudovibrio sp. JE062] gi|211961722|gb|EEA96917.1| exodeoxyribonuclease III [Pseudovibrio sp. JE062] Length = 260 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 86/303 (28%), Gaps = 67/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWNIN + + ++ + D+ QE+ S + Sbjct: 1 MKIASWNING----------------VKARLETVLKWLEEEQPDVACFQEIKSVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ +A+ K +D +R Sbjct: 41 ------NFPRAPFEELGYNLETHGQKGFNGVAILSKRPFEEVNRRLPGDEQDEQARY--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E ++ N + I V ++L + +++ + Y + L ++ E Sbjct: 92 --IEAVIAGNNEPIRVGCLYLPNGNPVETEKFPYK------LRWMDRLHKHAEKQLEKEE 143 Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249 F++ GD+N + + N + +S Sbjct: 144 AFLLVGDYNVIPEPEDAKKPEAWVGDALFRPESRQRFRALLNLGFTEAVRATNSNAGTYT 203 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A + + D ++ SDH P+ + Sbjct: 204 FWDYQAGAWQRDNGIRIDHLLLSPEAARIMQGVGI-------DKHVRGWEKPSDHVPVWV 256 Query: 301 DYD 303 + Sbjct: 257 ELS 259 >gi|83815707|ref|YP_446788.1| endonuclease/exonuclease/phosphatase family protein, putative [Salinibacter ruber DSM 13855] gi|83757101|gb|ABC45214.1| endonuclease/exonuclease/phosphatase family protein, putative [Salinibacter ruber DSM 13855] Length = 320 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 88/310 (28%), Gaps = 47/310 (15%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-- 75 + + + ++NI LS ++ Y + DIV LQE+ Sbjct: 10 TTRPDTLTVTTYNIGYLSGMRNNEPVVRPDSLFHANMDQAAGYLRAAAPDIVALQEIDFG 69 Query: 76 -----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI-------AVRKKNVRV 123 + + + + + AV + Sbjct: 70 GARAAHVHQLDTLAARLGYPGAAQAVNWDERYLPFPYGRPAVHFGRTLSGQAVLSRFPVR 129 Query: 124 LQQSYPLLGAKDSFSRAG---NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 L F R +R A +V+++G+ + V+++HL++F Sbjct: 130 RHVRRTLPRPPQPFFRDAFYLDRLAQVGVVDVDGRPLAVINVHLEAFDVG---------- 179 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTIDPNDSL 234 QA+ + D + + +P ++ GDFN ++ D + I L Sbjct: 180 --TRETQARVVNDLYRRLADRGIPTLLLGDFNSSLSSGEEGGQAGAEDATMQHILAGTDL 237 Query: 235 IRFPKEKDSRCNANKNL--RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID+ ++ + + + Sbjct: 238 RSAVNTASADTASATYPADAPARTIDHIFYPPQFFEAVDTQRWCGRPAP----------P 287 Query: 293 SDHCPISIDY 302 SDHC ++ Sbjct: 288 SDHCAVTAAL 297 >gi|226944961|ref|YP_002800034.1| exonuclease III [Azotobacter vinelandii DJ] gi|226719888|gb|ACO79059.1| exodeoxyribonuclease III [Azotobacter vinelandii DJ] Length = 270 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 79/312 (25%), Gaps = 74/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGL----------------RARPHQLSALIDKHRPDVIGLQETKVADE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ + + Q G D + R Sbjct: 41 ------QFPLEQIGELGYHVHYHGQKGHYGVALLSRQPPLEVQK----GFPDDGEDSQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + G+ + V++ F + ++ L+ + + + Sbjct: 91 FIWGVYADAAGQPVTVMN-----GYFPQGESRAHPLKFPAKTRFYADLQALLESRFDPGQ 145 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 P + GDFN ++ + F + Sbjct: 146 PLALMGDFNIAPEDSDIGIGAENARRWLRTGKCSFLPEEREWMARLKDWGLQDSFRELHP 205 Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 C+ + ID + + L + D + Sbjct: 206 QACDRFSWFDYRSRGFEDDPRRGLRIDLILTSRALRPRLRAA-------DVDYELRAMDK 258 Query: 292 LSDHCPISIDYD 303 SDH P+ ++ D Sbjct: 259 PSDHAPVWLELD 270 >gi|319954572|ref|YP_004165839.1| endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM 14237] gi|319423232|gb|ADV50341.1| Endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM 14237] Length = 279 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 52/310 (16%), Positives = 86/310 (27%), Gaps = 43/310 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 + K V L+ Q ++S+NI +G + W + Sbjct: 1 MMKLVNFLLTIFCFSAMGYGQVTSIMSYNIRLDVASDGENAWPLRK-------DFVIDQL 53 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 K DI +QE + + + ++AI Sbjct: 54 KFYSPDIFGIQEGTPQQTAYLAAQLKDYKFI-------GVGRDGGDKGEYSAIFYNSSQF 106 Query: 122 RVLQQSYPLLGAKD-----SFSRAGNRRAVELLVEING--KKIWVLDIHLKSFCFLDSLE 174 V +++ L + A NR L +K WV + HL Sbjct: 107 TVAEENTFWLSETPTEVSMGWDAACNRVCTYGLFTNKDTKEKFWVFNTHLDHKG------ 160 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 +Q Q + + I + P V+ GDFN + ID + Sbjct: 161 ------ARARAQGVQLILNKIKEVNTKDYPVVLTGDFNLEPTDEVIATVKNVLIDAKEVA 214 Query: 235 IRFPKEKDSRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + NA K K IDY + + Y K S Sbjct: 215 HL-TFGPEGTFNAFKFTTAVKRRIDYIFI--------APNQVNVTKYAVLSDSKDLKYPS 265 Query: 294 DHCPISIDYD 303 DH P+ I+++ Sbjct: 266 DHLPVYIEFE 275 >gi|328949215|ref|YP_004366552.1| Endonuclease/exonuclease/phosphatase [Treponema succinifaciens DSM 2489] gi|328449539|gb|AEB15255.1| Endonuclease/exonuclease/phosphatase [Treponema succinifaciens DSM 2489] Length = 333 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 90/320 (28%), Gaps = 33/320 (10%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNS--------VKRTTSDYTLL 57 + L C S +V++ +WN+ T + + + L Sbjct: 16 LWILFLPFFACCDSGKSEVKIANWNVQTFFDANNDGTEYSEFAKSKTWGEEMYKERLKRL 75 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 K LDADI ++E+ + N + + N ++ ++ ++ N V Sbjct: 76 CSVIKKLDADIFIMEELENSNVLFDI--SNFLAGEWNPRKIYRYACFSKNEGGAIGCGVL 133 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + + L ++ R ++ +++ K + + H KS + + Sbjct: 134 SRIPLQKMNLHSLDIRTENEKMPRTRPLSKIEIKLKEKTLSIFVNHWKSKSGGEEKTEKW 193 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY--------LGNNDDFWKTID 229 + L +++ GDFNR IN + K + Sbjct: 194 RNREECV------LSFFMSHALNEGKAVFAVGDFNRDINDFCVKKNGNVLLRAWHGKLLG 247 Query: 230 PNDSL----IRFPKEKDSRCNANKNLRNKIPIDYFVMDQ-----NAYKFLIQESFSEILY 280 L E + ID + + +E Sbjct: 248 DEGLLVKSTWFDENENLIEPGSYYFREEWSRIDNIFYSGKIEVEDFFPATEGFWCNENSI 307 Query: 281 NEDDIKSRGKRLSDHCPISI 300 G+ SDH P+ Sbjct: 308 PYKYSLWNGRGYSDHLPLVC 327 >gi|260776998|ref|ZP_05885892.1| putative phospholipase C [Vibrio coralliilyticus ATCC BAA-450] gi|260606664|gb|EEX32938.1| putative phospholipase C [Vibrio coralliilyticus ATCC BAA-450] Length = 441 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 88/297 (29%), Gaps = 36/297 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 ++L+++NI L Y L+ +Y K D++ LQE+ Sbjct: 170 TVEPDENTLKLMTYNIWALPVIASHIGD---------RYALIPEYVKGY--DVLALQEVF 218 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + + + I R V Q +P D Sbjct: 219 ASGREEFLRELAKEYPYQTKMLDKDGINIYDGG---VTIVSRYPIVNQAQYVFPDCTGTD 275 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 F+ V GK V H SF + + +Q + L + Sbjct: 276 CFADK---GVNYAEVIKGGKAYHVFATHTASFDTDTARDYRQRQ-----FKQIRELATLL 327 Query: 196 TQKKESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--- 251 S V +GDFN + G+ + + + +S + N Sbjct: 328 N--IPSNETVVYSGDFNVNKRKFPGDYQQMIANLSAIEPQ--YSGYTESTFDPRINDFAG 383 Query: 252 ------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +DY ++ ++ ++ + D+ + LSDH P+S Sbjct: 384 EAMSGGENVEYLDYVMVSDEYAVKAFNDNRVDVPRSTDERLWKHYNLSDHFPVSAVI 440 >gi|196230561|ref|ZP_03129423.1| Endonuclease/exonuclease/phosphatase [Chthoniobacter flavus Ellin428] gi|196225491|gb|EDY19999.1| Endonuclease/exonuclease/phosphatase [Chthoniobacter flavus Ellin428] Length = 303 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 103/315 (32%), Gaps = 31/315 (9%) Query: 1 MIRKYVLALVFFL-VPCTASVAQ---KVRLVSWNINTLSEQEGVSLWKNS---VKRTTSD 53 M + AL+ + +P A A V + ++N+ +E V+ ++ + Sbjct: 1 MRFPRLFALLLAVRLPLAALGADQPPSVVIATYNVENYLGEESVAADTGPRKAKLKSEKE 60 Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 + + K+++ DI+ + EMG + + + + ++ Sbjct: 61 IDAVVRVVKDINPDILGICEMGEPERFEDF----KKRLADAGLHYTDFEYVQALDNQRH- 115 Query: 114 IAVRKKNVRVLQQSYPLLGAK-DSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLD 171 +A+ + V +QS + + R +++ +EI G ++ + HLKS + Sbjct: 116 LALVSRYPIVARQSLSNVSYELAGQPEKVRRGFLDVTIEIRPGYQVRFVSAHLKSKLPVP 175 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 + +A L+ + + + V V GDFN N ++ Sbjct: 176 EG------EALVRRNEASLLRKHLDEILVADPNVRLVCFGDFNDLKNEPAYHEVAG-VHG 228 Query: 230 PNDSLIRFPKEKDSRCNANKNL--RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 P K++ IDY + ++ + S + Sbjct: 229 PTYMTALPAKDELGDTWTEYWKAADLYSRIDYIFVSPVLHREISPGSPRV------YRSA 282 Query: 288 RGKRLSDHCPISIDY 302 SDH P+ Sbjct: 283 YWNDASDHRPVYATI 297 >gi|21232876|ref|NP_638793.1| hypothetical protein XCC3447 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767053|ref|YP_241815.1| hypothetical protein XC_0717 [Xanthomonas campestris pv. campestris str. 8004] gi|21114707|gb|AAM42717.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572385|gb|AAY47795.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 288 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 84/285 (29%), Gaps = 35/285 (12%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R++S+N+ V + + KR + + K D+ QE+ S A Sbjct: 34 PLRVMSFNVR-------VPVDTDGDKRWQARRGAMVSVIKQTHPDVFGTQELVSEQAGYL 86 Query: 83 VFPKNTWCIFYSTERLINHSKR-DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F R + + D T V N + P + ++ Sbjct: 87 AAQLPNYRWFGQGRRGDDSDEHMGVFYDTRTLNVVESGNFWL--SDTPEVAGSITWGNVL 144 Query: 142 NRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R L E + ++ ++ + H A+ + I Q Sbjct: 145 PRMVTWALFERRSDKRRFYLFNTHFPY----------RDEDEPAREHSARLILSRIAQ-L 193 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 + +P V+ GDFN + + + + + + ID+ Sbjct: 194 PADIPVVLTGDFNSDPD--KITYPTLTAVLGDARARAPKRSGPENTFQDFSTHPTRRIDW 251 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + D + G SDH P+ ++ + Sbjct: 252 ILFRG----------LTPTQFTTLDDRPGGVLPSDHYPVLAEFAW 286 >gi|222110327|ref|YP_002552591.1| exodeoxyribonuclease iii xth [Acidovorax ebreus TPSY] gi|221729771|gb|ACM32591.1| exodeoxyribonuclease III Xth [Acidovorax ebreus TPSY] Length = 258 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 86/301 (28%), Gaps = 70/301 (23%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + +WNIN+LS + + + D + LQE+ K+ Sbjct: 3 IATWNINSLS----------------VRLPQVLAWLEANPVDAIGLQEL-------KLVD 39 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + + + +A+ + + G D +R Sbjct: 40 E---KFPHDAFEAAGYHAVCFGQKTYNGVAILSRTPLRDVVRN-IPGHGDEQAR-----V 90 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + ++ + +++ + + + + +Y + L+DW+ + + Sbjct: 91 IAATLDTPEGPLRLVNCYFVNGQAPGTEKFSYK------LLWLEALRDWLRTELAAHPRL 144 Query: 206 VIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNANKN 250 V+ GDFN + D ++ + F + D + Sbjct: 145 VLVGDFNVAPEDRDSFDPVGLKDTIHHTVEERQHFQDLLGLGLTDAF-RLFDQPEKSYSW 203 Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 ++ ID+ ++ + D + + SDH P+ + Sbjct: 204 WDYRMLGFQKNRGLRIDHILVSTALRPSVTAC-------RIDRAPRKNPQPSDHAPVVVS 256 Query: 302 Y 302 Sbjct: 257 L 257 >gi|123968077|ref|YP_001008935.1| exodeoxyribonuclease III [Prochlorococcus marinus str. AS9601] gi|123198187|gb|ABM69828.1| exodeoxyribonuclease III [Prochlorococcus marinus str. AS9601] Length = 281 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 86/301 (28%), Gaps = 63/301 (20%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + +WN+N + + + + + DI+ LQE + Sbjct: 3 IATWNVN----------------SIRTRLSQILDWINKSNPDILCLQETKVVDD------ 40 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + +S + +A+ K + G D+ Sbjct: 41 ----NFPIEAFEKLGYSVEIYGQKSYNGVAIISKIKPENVKKG-FYGCNDTNQNIEIFLD 95 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + L+ + I ++++++ + LDS + Y L ++ +++ Sbjct: 96 QKRLISADINGIKIINVYVPNGSSLDSSKFEYK------INWLNCLASFLDDQEKKGALI 149 Query: 206 VIAGDFNRKINYLGNNDD-------FWKTIDPND-------SLIRFPKEKDSRCNANKNL 251 + GDFN + L +D I+ + LI + + Sbjct: 150 CLMGDFNVAPSNLDIHDPKKYEGGIMASEIERSALNNVLKKRLIDSFRIYEQNTGHWSWW 209 Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ + + L D R SDH P+ ID Sbjct: 210 DYRNNAFELNKGWRIDHIYISKELSSKLKSCVI-------DSCPRGNLRPSDHAPVMIDL 262 Query: 303 D 303 + Sbjct: 263 N 263 >gi|319639504|ref|ZP_07994253.1| exodeoxyribonuclease III [Neisseria mucosa C102] gi|317399270|gb|EFV79942.1| exodeoxyribonuclease III [Neisseria mucosa C102] Length = 256 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 88/304 (28%), Gaps = 73/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + + ADI+ LQE Sbjct: 1 MKIATWNVNSLN----------------VRLPQVQNWLADHQADILALQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ ++ + R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIISRHEPQDVH-----CGLPALPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++++ + LDS + Y Q L +++ + + Sbjct: 90 RVIAATIN----GVRVINVYCVNGEALDSPKFQYKE------QWFAALTEFVRAEMAAHP 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D ++K + K Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWFKNLLDLGLTDSLRKVHPEGAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ + L + D +R SDH P+ Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILTSPELAANLTDVTV-------DLETRAQERPSDHAPVI 251 Query: 300 IDYD 303 ++D Sbjct: 252 AEFD 255 >gi|298375899|ref|ZP_06985855.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] gi|298266936|gb|EFI08593.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] Length = 287 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 95/313 (30%), Gaps = 41/313 (13%) Query: 2 IRKYVLALVFFLVPCTASVA----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 +++ +L L+ L A +K+ ++S+NI + + + W + D+ Sbjct: 1 MKRILLCLMVALFATGCLFAKNNDEKMNVMSYNIRYDNSGDKDNQW-----KFRRDFA-- 53 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 K +AD+ QE+ + + + + Sbjct: 54 ADLVKFYEADVFGAQEVLNNQLNDLLNRLPEYAYVGVGREDGKTKGEYAPIFYRKDRFSV 113 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLEN 175 K+ K + A R A +++ GKK + L+ HL + Sbjct: 114 DKSGNFWLAEDINAIGKKGWDAACERVATWAILKDKNTGKKFFFLNTHL-----DHMGKV 168 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPN 231 SL+ +QA+ L +P ++ GDFN + + + + Sbjct: 169 ARHEGASLVLEQAKKL--------SENLPIIVTGDFNAVPSDEPIQVLTNPSDPRHLTHS 220 Query: 232 DSLIRFPKEKDSRCNAN--KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 ++ F + + + IDY + N + + Sbjct: 221 RTIAGFIYGPEWTFHDFGKIPYDKREWIDYIFVKGN---------IKVLRHGVLTETLNN 271 Query: 290 KRLSDHCPISIDY 302 SDHCP+ Sbjct: 272 LFPSDHCPVISTL 284 >gi|188990144|ref|YP_001902154.1| hypothetical protein xccb100_0749 [Xanthomonas campestris pv. campestris str. B100] gi|167731904|emb|CAP50088.1| putative exported protein [Xanthomonas campestris pv. campestris] Length = 288 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 85/285 (29%), Gaps = 35/285 (12%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R++S+N+ V + + KR + + K D+ QE+ S A Sbjct: 34 PLRVMSFNVR-------VPVDTDGDKRWQARRGAMVSVIKQTHPDVFGTQELVSEQAGYL 86 Query: 83 VFPKNTWCIFYSTERLINHSKR-DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F R + + D V N + P + ++ Sbjct: 87 TAQLPNYRWFGQGRRGDDSDEHMGVFYDTRALNVVESGNFWL--SDTPEVAGSITWGNVL 144 Query: 142 NRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R L E + ++ ++ + H D E S L+ + L Sbjct: 145 PRMVTWALFERRSDKRRFYLFNTHFPYR---DEDEPARERSARLILSRIAQL-------- 193 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 + +P V+ GDFN + + + + + + ID+ Sbjct: 194 PADIPVVLTGDFNSDPD--KITYPTLTAVLGDARAKAPKRSGPENTFQDFSTHPTRRIDW 251 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + D + G SDH P+ ++ + Sbjct: 252 ILFRG----------LTPTQFTTLDDRPGGVLPSDHYPVLAEFAW 286 >gi|120610134|ref|YP_969812.1| exodeoxyribonuclease III [Acidovorax citrulli AAC00-1] gi|120588598|gb|ABM32038.1| exodeoxyribonuclease III [Acidovorax citrulli AAC00-1] Length = 258 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 31/303 (10%), Positives = 88/303 (29%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N+LS + + + D + LQE+ K+ Sbjct: 1 MKLATWNVNSLS----------------IRLPQVLAWLADNPVDAIGLQEL-------KL 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ + + G +D+ +R Sbjct: 38 VDE---KFPHDAFESAGYHAVSFGQKTYNGVAILSRTPVRDVVRN-IPGHEDTQAR---- 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ + ++ + + + + Y L W+ ++ + Sbjct: 90 -VIAATLDTPQGPLRFINCYFVNGQAPGTEKFAYK------MLWLAALHRWVREELLAHP 142 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN + D ++++ + + + + Sbjct: 143 RLVLVGDFNVAPEDRDSFDPVGLKDTIHHTVEERTHFQSLLQLGLTDAY-RMFEQPEKSF 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ++ ID+ ++ + + + D + + SDH P+ Sbjct: 202 SWWDYRMLGFQKNRGLRIDHILVSEALRGQVTACTI-------DRQPRKNPQPSDHAPVV 254 Query: 300 IDY 302 Sbjct: 255 ATL 257 >gi|262198203|ref|YP_003269412.1| endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM 14365] gi|262081550|gb|ACY17519.1| Endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM 14365] Length = 1075 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 91/331 (27%), Gaps = 47/331 (14%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT------SDYTLLRQYAKNLDAD 67 P +V ++ S+N+ +G + + + LDAD Sbjct: 623 TPAPGAVGGSFKVASFNVLNYFNGDGQGGGFPTARGADTAAEFVRQRDKIISALVALDAD 682 Query: 68 IVFLQEMGSY-----NAVAKVFPKNTWC--IFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 ++ L E+ + +A+A + S + + + ++ I R + Sbjct: 683 VIGLMEIENDGYSSLSAIADLTAGLNAALPAGESYDFVDPGVSQIGSDAIAVGYLYRTQT 742 Query: 121 -VRVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCF-----LDS 172 V + F NR A+ E +G++ + HLKS D Sbjct: 743 AGLVGASAILDSSVDPRFDDTKNRPALAQTFEELASGERFTIAVNHLKSKGSSCDSLGDP 802 Query: 173 LENTYSPSCS-LLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 +C+ + A+ L DW+ F+I GD N + Sbjct: 803 DTGDGQGNCNLTRTAAAEALADWLGTDPTSSGDDDFLIIGDLNAYAMEDPI-----AALQ 857 Query: 230 PNDSLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + +DY + + + I +E Sbjct: 858 AGGYTDLADAFIGADVAYSYIFDGQAGYLDYALANDALLAQVTGVHEWHINTDEPIALDY 917 Query: 289 G-----------------KRLSDHCPISIDY 302 R SDH P+ I Sbjct: 918 NVEFKSPGQIDSLYDDGPYRASDHDPVVIGL 948 >gi|327273914|ref|XP_003221724.1| PREDICTED: nocturnin-like [Anolis carolinensis] Length = 375 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 48/301 (15%), Positives = 92/301 (30%), Gaps = 22/301 (7%) Query: 15 PCTASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 +A Q +R++ WNI L E ++ R L+ + DI+ L Sbjct: 78 TNSARRHQPIRVMQWNILAQALGEGKDNFIQCPMEALRWEERKCLILEEILAYQPDILCL 137 Query: 72 QEMGSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 QE+ Y + + + + + + +N A+ K +++ + Sbjct: 138 QEVDHYFDTFQPLLSRMGYQCTFLPKPWSPCLDVECNNGPDGCALFFLKDRFSLVKSTNI 197 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-A 188 L A + A L + + HLK+ + Q A Sbjct: 198 RLTAMKLKTN-QVAIAQILKCNETDRLFCIAVTHLKA----------RNGWERFRYAQGA 246 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 L++ E+ +P ++ GDFN + +++ N + + S Sbjct: 247 DLLENLKRITHEAEIPLIVCGDFNADPTEEVYKEFSTSSLNLNSAYKLLSADGLSEPPYT 306 Query: 249 KNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +DY Q+A K S + SDH + D+ Sbjct: 307 TWKIRPSGECRHTLDYIWYSQHALKVDSALSLLTEEQIGPNRLPSFNYPSDHLSLVCDFT 366 Query: 304 F 304 F Sbjct: 367 F 367 >gi|289432089|ref|YP_003461962.1| endonuclease/exonuclease/phosphatase [Dehalococcoides sp. GT] gi|288945809|gb|ADC73506.1| Endonuclease/exonuclease/phosphatase [Dehalococcoides sp. GT] Length = 639 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 87/288 (30%), Gaps = 54/288 (18%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P +R++++N++ +G D L + ++ AD+V LQE+ Sbjct: 403 PSPPQFEGSLRIMTYNLHNGFNTQG-----------KLDMEALARVIEDSGADVVALQEI 451 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 ++ W ++RL +S + + A+ K + + L Sbjct: 452 SRGWVISGRVDMLEWL----SQRLNMYSAFGATAGEYWGNAILSKYPILDTHNISLESEG 507 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R + ++++ G+ +++ HL + QA L D+ Sbjct: 508 LPIK----RGYLNAVLDLGGRYLYLAATHLHHVPEEGD----------VRLIQAGELADF 553 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + +I GDFN + + + E + + Sbjct: 554 WDNAPAT----IILGDFNAEPDSEEIGLLRQAGLSD-------SLEGQTSVLTYHSADLY 602 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IDY +++ + + SDH I D Sbjct: 603 QRIDYIWASPEI-EYIDSYTIVSL-------------ASDHLAIIADI 636 >gi|323490963|ref|ZP_08096158.1| endonuclease yhcR [Planococcus donghaensis MPA1U2] gi|323395443|gb|EGA88294.1| endonuclease yhcR [Planococcus donghaensis MPA1U2] Length = 1164 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 37/324 (11%), Positives = 92/324 (28%), Gaps = 59/324 (18%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYN- 78 +K+ + ++N+ S + + + + + + +L+ DI+ + E+ + Sbjct: 680 EKLTVAAYNVENFSA--------DPNHTSDAKAQRIAESFVNDLNSPDIIVMVEVQDNDG 731 Query: 79 -----------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 A + T+ N +I + V Sbjct: 732 PITSGNSDATASYERLIAGIQAAGGPTYEW-TDIAPEYNQDGGQPGGNIRVGYLYNPERV 790 Query: 122 RVLQQSYPLLGAKDSFSRAG---------------NRRAVELLVEINGKKIWVLDIHLKS 166 + + + +S+ R+ + + G+++ V+ HL S Sbjct: 791 ILSEGTKGTATETNSWVDGELALNPGRVQPIAMPNTRKPIAAQFDFQGEQVVVIGAHLNS 850 Query: 167 FCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGN 220 L P S + A + +I + ++ + ++AGD N Sbjct: 851 KGGDQPLFGKNQPPFFGSVEERIELATAINGFIAEGLEQNPDLNVIVAGDMNDF-----E 905 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 + + + + + N +D+ ++ N + + Sbjct: 906 FTPALQALKGDILTNKVEDVPLEDRYSYYYQGNSQVLDHLLVTNNLAQRTELDMVHI--- 962 Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ F Sbjct: 963 -NAMFMEEHGRASDHDPLLAQISF 985 >gi|148230108|ref|NP_001079281.1| nocturnin [Xenopus laevis] gi|6093516|sp|P79942|NOCT_XENLA RecName: Full=Nocturnin; AltName: Full=Rhythmic message 1; Short=RM1 gi|1755150|gb|AAB39495.1| nocturnin [Xenopus laevis] Length = 388 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 44/300 (14%), Positives = 95/300 (31%), Gaps = 22/300 (7%) Query: 16 CTASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++ + R++ WNI L E ++ + + L+ + D++ LQ Sbjct: 92 SSSQQPRTFRVMQWNILAQALGEGKDNFIMCPMEALKWEERKYLILEEILMYQPDVLCLQ 151 Query: 73 EMGSY-NAVAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 E+ Y + + + + F + +N A+ + +++ + Sbjct: 152 EVDHYFDTFQPILSRLGYQCTFLAKPWSPCLDVEHNNGPDGCALFFLQDRFQLVNSAKIR 211 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 L A+ + A L G+++ HLK+ + Q Sbjct: 212 LSARTLKTN-QVAIAETLQCCETGRQLCFAVTHLKA----------RTGWERFRLAQGSD 260 Query: 191 LKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L D + + + VP +I GDFN +++ N + ++ +S Sbjct: 261 LLDNLESITQGATVPLIICGDFNADPTEEVYKRFASSSLNLNSAYKLLSEDGESEPPYTT 320 Query: 250 NL-----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +DY Q+A + + SDH + D+ F Sbjct: 321 WKIRTTGESCHTLDYIWYSQHALRVNAALGLPTEEQIGPNRLPSFNYPSDHLSLVCDFSF 380 >gi|241765066|ref|ZP_04763058.1| exodeoxyribonuclease III Xth [Acidovorax delafieldii 2AN] gi|241365303|gb|EER60125.1| exodeoxyribonuclease III Xth [Acidovorax delafieldii 2AN] Length = 258 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 33/302 (10%), Positives = 82/302 (27%), Gaps = 70/302 (23%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L +WNIN+LS + + D + LQE+ + Sbjct: 3 LATWNINSLS----------------VRLPQVVAWLAANPVDALCLQELKLTDD------ 40 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 ++ + + + +A+ ++ R Sbjct: 41 ----KFPFAALQEAGYHAVAMGQKTYNGVAILSRSPLRDVVRNI------PGHDDQQARV 90 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + ++ + +++ + + S + Y + Q L DW+ + + Sbjct: 91 IAATMDTATGPVRLVNCYFVNGQEPGSEKFAYK------MRWLQALHDWLRTELAAHPRL 144 Query: 206 VIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNANKN 250 + GDFN + D ++ + + + + A Sbjct: 145 ALLGDFNVAPEDRDSYDPVGLRETIHHTTEERAHFQALLALGLTDAY-RMFEQPEKAYSW 203 Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 ++ ID+ ++ + + + D + + SDH P+ Sbjct: 204 WDYRMLGFQKNRGLRIDHILVSEALRGTVKACTI-------DRAPRKNPQPSDHAPVVAT 256 Query: 302 YD 303 D Sbjct: 257 LD 258 >gi|39935926|ref|NP_948202.1| exodeoxyribonuclease III [Rhodopseudomonas palustris CGA009] gi|39649780|emb|CAE28302.1| exodeoxyribonuclease III [Rhodopseudomonas palustris CGA009] Length = 303 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 95/311 (30%), Gaps = 67/311 (21%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +R+ +WN+N L + ++ D+V LQE+ Sbjct: 33 SSRATDGAMRIATWNVN----------------SVRQRLDHLVSWLQDCQPDVVCLQEI- 75 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 V + FP+ + ++ +A+ K D Sbjct: 76 --KCVDEAFPRE-------PIEALGYNVVTHGQKTFNGVALLSKYPLEEANPGLAGDESD 126 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 +R +E +V + + V ++L + + S + Y S L+D+ Sbjct: 127 VHARF-----LEGVVSLKHGVVRVACLYLPNGNPVGSEKYPYKLS------WMARLRDYA 175 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKE 240 Q+ ++ P ++AGDFN ++ ++T+ Sbjct: 176 QQRLKTEEPLILAGDFNVIPQAEDVHNPAAWTEDALFRPETRESFQTLLGLGLTDALRAT 235 Query: 241 KDSRCNANKNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 D+ I ID+ ++ A L D ++ Sbjct: 236 TDAPGQYTFWDYQAGAWQKNWGIRIDHLLLSPQAADRLRHVGI-------DSYVRNWEKP 288 Query: 293 SDHCPISIDYD 303 SDH P+ D+D Sbjct: 289 SDHVPVWADFD 299 >gi|289208245|ref|YP_003460311.1| endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix] gi|288943876|gb|ADC71575.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix] Length = 554 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 42/298 (14%), Positives = 95/298 (31%), Gaps = 30/298 (10%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY- 77 + +R+ + N+ G + +R + L + L AD++ E+ + Sbjct: 270 AADGALRIATANLENDFVTLGERGASSRAERVRQE-AKLNTALRPLKADVITTIELENRP 328 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A ++ + + + + + + + I ++ R + +L Sbjct: 329 AARERLIERLNQHGDITYQAVRHPAPGT--DAIKVGMSYRPDRLELLDAVAD-------G 379 Query: 138 SRAGNRRAVELLV-EINGKK---IWVLDIHLKSFCFLDSLENTYSP-SCSLLSQQAQWLK 192 R +R + ++G+ I + KS C + + QA+ L Sbjct: 380 DRVHHRPPLLAWFGTLDGEPLFGIVAVHFKAKSGCPSSGDIDRGQGCWNERRTAQAERLA 439 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 WI Q++ +P +IAGD N + + + + Sbjct: 440 QWIEQERRDGLPVIIAGDLNAYAAEDPLR------LLREAGKRDLVHAEPDQAYSYVFRG 493 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG--------KRLSDHCPISIDY 302 +DY + ++ + + + I +E R SDH P+ +D Sbjct: 494 QSGQLDYLLGPRDLEERVGKAGSWAINADEPAFLGFDGSQPAEGPWRASDHDPVWLDL 551 >gi|302383396|ref|YP_003819219.1| endonuclease/exonuclease/phosphatase [Brevundimonas subvibrioides ATCC 15264] gi|302194024|gb|ADL01596.1| Endonuclease/exonuclease/phosphatase [Brevundimonas subvibrioides ATCC 15264] Length = 245 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 47/283 (16%), Positives = 87/283 (30%), Gaps = 43/283 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL+++N++ + D + D DIV LQE+ A Sbjct: 1 MRLLTYNVHRCVGVDR-----------RLDVERIVGVIAEHDPDIVCLQELDVGRARTGG 49 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H+ + + A+ + L + L K R Sbjct: 50 VDQARVIADRLAMSVRFHAAMTVEQEEY-GDAILTRCPERLIRVGALPTVKGIPG-LEPR 107 Query: 144 RAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK-DWITQKKES 201 A+ + VE G + VL HL QA L E Sbjct: 108 GAIWIRVEKPGCPPLNVLTTHLGLVP-------------REQRLQAAALAGKDWMGHAEC 154 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 P ++AGDFN +T+ + + + + + I ID+ Sbjct: 155 QGPTILAGDFNATSITRPY-----QTLTRHLADCQRQIGQKPTIKTFPSGFPAIRIDHVF 209 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + ++ +F + SDH P+ +D++F Sbjct: 210 VSPHIRVTGVRAAF----------SPLARMASDHLPLIVDFEF 242 >gi|261381264|ref|ZP_05985837.1| exodeoxyribonuclease III [Neisseria subflava NJ9703] gi|284795738|gb|EFC51085.1| exodeoxyribonuclease III [Neisseria subflava NJ9703] Length = 256 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 87/304 (28%), Gaps = 73/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + + ADI+ LQE Sbjct: 1 MKIATWNVNSLN----------------VRLPQVQNWLADHQADILALQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ + + R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIISRYEPQDVH-----CGLPALPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++++ + LDS + Y Q L +++ + + Sbjct: 90 RVIAATIN----GVRVINVYCVNGEALDSPKFQYKE------QWFAALTEFVRTEMAAHP 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D ++K + K Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWFKNLLDLGLTDSLRKIHPEDAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ + L + D +R SDH P+ Sbjct: 199 TWFDYRGGMFQRKLGLRIDHILTSPELAATLTDVTV-------DLETRAQERPSDHAPVI 251 Query: 300 IDYD 303 ++D Sbjct: 252 AEFD 255 >gi|270295842|ref|ZP_06202042.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270273246|gb|EFA19108.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 287 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 77/294 (26%), Gaps = 37/294 (12%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A + V ++S+NI + ++ + W+ R + D DI+ QE+ Sbjct: 23 APAPEPVNVMSFNIRYDNLEDSLDNWQYRKDRA-------ANAIRFYDVDILGTQEVLHN 75 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + S + P + + Sbjct: 76 QLEDLKQRLPEYGVIGVGREDGKEKGEYSALWYKKDRFNLLDSGYFWLSETPEVAGSKGW 135 Query: 138 SRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 A R A + +++GK+ + L+ HL SL+ + L Sbjct: 136 DGACERIASWAKLQDKVSGKEFFALNTHL-----DHVGVAARREGISLMLDKVNEL---- 186 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRFPKEKDSRCNANKNL 251 +P V+ GDFN + + + + Sbjct: 187 ----SGNLPVVVTGDFNASPESDVIKHVTDPSNPEHLTDARQASAIVYGPAWSFHDFGKI 242 Query: 252 RNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY + + Y LSDH PI + + Sbjct: 243 PYDKRPLIDYVFVRNGL---------KVLRYGVLAETENNAFLSDHAPILVTVE 287 >gi|284992404|ref|YP_003410958.1| endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM 43160] gi|284065649|gb|ADB76587.1| Endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM 43160] Length = 271 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 50/293 (17%), Positives = 90/293 (30%), Gaps = 57/293 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------S 76 VRLV++N + +G D L DAD++ LQE+ S Sbjct: 19 PVRLVTFNTHHGVGDDG-----------RHDLPRLATVLAAADADLICLQEVDRHFGGRS 67 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + + + I+ +RD A+ + ++ +PL G+ Sbjct: 68 EDVDQALLLSRALDMQLAWGPAIDEPRRDEGLRRQYGNALLSRLPVLISDVHPLPGSG-- 125 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A+ +VE++G +WV HL + ++Q + T Sbjct: 126 ----EPRSALRTMVELDGAALWVTTTHLSTCSP------------EERAEQIAAIAQLHT 169 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN------ANKN 250 + E+ V+ GDFN + D + R + Sbjct: 170 EPMETG---VLVGDFNADPRAPELARLTGRFTDAWELAPDREDRAGWRFWQARRGGTHPA 226 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 R ID + + + G SDH P+ +D + Sbjct: 227 RRPHRRIDQVWVSPG----VGVSRAHVL---------DGAGASDHLPLVVDLE 266 >gi|229154378|ref|ZP_04282498.1| Sphingomyelinase C [Bacillus cereus ATCC 4342] gi|228629202|gb|EEK85909.1| Sphingomyelinase C [Bacillus cereus ATCC 4342] Length = 338 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 47/320 (14%), Positives = 102/320 (31%), Gaps = 44/320 (13%) Query: 17 TASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 +++ A +++++ N+ LS L+ N + +D Y K + D++ Sbjct: 28 SSAQADTSTNQNNILKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVI 81 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKN 120 L E+ +A ++ T E S+ +A+ K Sbjct: 82 ILNEVFDNSASDRLLGNLKREYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKW 141 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + + Y + N+ V ++ N + V+ HL++ DS+ SP+ Sbjct: 142 PIIEKIQY-VFAQGCGPDNLSNKGFVYTKIKKNDHFVHVIGTHLQA---EDSMCGKTSPA 197 Query: 181 CSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSL 234 S+ + Q + ++D+I + + + GD N N +KT+ + Sbjct: 198 -SVRTNQLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPS 256 Query: 235 IRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 N +DY + ++ E+ + + Sbjct: 257 YTGHTATWDATTNSIAKYNFPDSPAEYLDYIISSKDHANPSFIENKVLQPKSPQWTVTSW 316 Query: 290 KR------LSDHCPISIDYD 303 + SDH P+ Sbjct: 317 LKKYTYNDYSDHYPVEATIS 336 >gi|218658684|ref|ZP_03514614.1| putative metal-dependent hydrolase protein [Rhizobium etli IE4771] Length = 216 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 33/251 (13%), Positives = 70/251 (27%), Gaps = 38/251 (15%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + ADI+ LQE+ + + H + + A Sbjct: 1 RIASVIAEAGADIIALQEVDVLRRRTGGVDQAHLIASLLKMQAHFHPALSVAEEQY-GDA 59 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + ++ PL R A+ + V + +K+ V++ HL Sbjct: 60 IITALPTAAVKAGPLPSIG------EQRGALSVEVLVGDRKLLVVNTHLGLRGRD----- 108 Query: 176 TYSPSCSLLSQQAQWLKD--WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 +Q L + W+ K+ +P ++ GDFN + + Sbjct: 109 --------RIRQMTTLLNSGWLRGTKDEPLPCILCGDFNAIPSSATYR------LATRSL 154 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 K + + + +D+ + + + + S Sbjct: 155 KDALLGGKAAPRATFPSRYPLMRLDHIFVTDDL----------VVKRATVLQNRLTRVAS 204 Query: 294 DHCPISIDYDF 304 DH P+ + F Sbjct: 205 DHLPLFAEISF 215 >gi|2251234|gb|AAB62717.1| probable nocturnin protein [Mus musculus] Length = 323 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 43/300 (14%), Positives = 97/300 (32%), Gaps = 23/300 (7%) Query: 16 CTASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 C++S + +R++ WNI L E ++ + L+ + DI+ LQ Sbjct: 28 CSSSHS-PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQ 86 Query: 73 EMGSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 E+ Y + + + + + + +N A+ + +++ + Sbjct: 87 EVDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLISSTNIR 146 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQ 189 L A + A L + +G++ + HLK+ + S Q Sbjct: 147 LTAMTLKTN-QVAIAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGCD 195 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L++ + + +P ++ GDFN + +++ N + + S Sbjct: 196 LLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSPDGQSEPPYTT 255 Query: 250 NLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +DY ++A + SDH + D+ F Sbjct: 256 WKIRTSGECRHTLDYIWYSRHALSVTSALDLLTEEQIGPNRLPSFHYPSDHLSLVCDFSF 315 >gi|228983878|ref|ZP_04144072.1| Sphingomyelinase C [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775857|gb|EEM24229.1| Sphingomyelinase C [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 338 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 47/320 (14%), Positives = 102/320 (31%), Gaps = 44/320 (13%) Query: 17 TASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 +++ A +++++ N+ LS L+ N + +D Y K + D++ Sbjct: 28 SSAQADTSTNQNNILKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVI 81 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKN 120 L E+ +A ++ T E S+ +A+ K Sbjct: 82 ILNEVFDNSASDRLLGNLKREYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKW 141 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + + Y + N+ V ++ N + V+ HL++ DS+ SP+ Sbjct: 142 PIIEKIQY-VFAQGCGPDNLSNKGFVYTKIKKNDHFVHVIGTHLQA---EDSMCGKTSPA 197 Query: 181 CSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSL 234 S+ + Q + ++D+I + + + GD N N +KT+ + Sbjct: 198 -SVRTNQLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPS 256 Query: 235 IRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 N +DY + ++ E+ + + Sbjct: 257 YTGHTATWDATTNSIAKYNFPDSPAEYLDYIISSKDHANPSFIENKVLQPKSPQWTVTSW 316 Query: 290 KR------LSDHCPISIDYD 303 + SDH P+ Sbjct: 317 LKKYTYNDYSDHYPVEATIS 336 >gi|332883343|gb|EGK03626.1| hypothetical protein HMPREF9456_01693 [Dysgonomonas mossii DSM 22836] Length = 305 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 31/305 (10%), Positives = 77/305 (25%), Gaps = 42/305 (13%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 AQ + + ++NI ++ + N + ++ D DI QE+ + Sbjct: 19 AQTLNVATYNIRNDNQGDA-----NKGNGWATRCPVIANLIAYNDFDIWGSQEVKHNQLI 73 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS---- 136 + + + + K + + + D Sbjct: 74 DLLDALPQYSYVGVGRDDGKTEGEYAPI-----FFKKDKYKVLKSGHFWMAEKTDEPNKG 128 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + A R + ++ K+ +L S L+ + + + Sbjct: 129 WDAALPRICTWVQLKETKGKLKFWFFNLHM---DHVGVIAREESAKLVLAKIKEMC---- 181 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR--NK 254 P ++ GDFN + I + + + Sbjct: 182 ----GNDPVILTGDFNVDQTHKSYTLLSTSGILTDSYDRAAVRYALNGTFNAFKPDLLTS 237 Query: 255 IPIDYFVMDQNAYKFLIQ-------------ESFSEILYNEDDIKS--RGKRLSDHCPIS 299 ID+ + + + + ++ + SDH P+S Sbjct: 238 SRIDHIFVSPSMSVERYGVLTDTYRTPRDGESNIKTGDFPKEYSFDGCDIRLPSDHFPVS 297 Query: 300 IDYDF 304 + + Sbjct: 298 VKLIY 302 >gi|225010308|ref|ZP_03700780.1| Endonuclease/exonuclease/phosphatase [Flavobacteria bacterium MS024-3C] gi|225005787|gb|EEG43737.1| Endonuclease/exonuclease/phosphatase [Flavobacteria bacterium MS024-3C] Length = 279 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 95/311 (30%), Gaps = 39/311 (12%) Query: 1 MIR---KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 M+R KY+ + + T VAQ + ++S+NI S+ +G +W L Sbjct: 1 MMRYTTKYLKMSLLMFLFTTVGVAQNLTVISYNIRYNSQSDGEDIWDLRKG-------EL 53 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 D +QE + + S ++ Sbjct: 54 VGQINQHSPDSFGVQEATQIQMQYILEALPEYAYVGVGRDNGATKGEYSAV-----FYLK 108 Query: 118 KKNVRVLQQSYPLLGAKDS----FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 +K + +++ L + + A R + + + + Sbjct: 109 EKFKLLESKTFWLSETPEEVSVGWDAALPRICTYAQFKEHTTGRVFWHFNTHFDHVGKA- 167 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + A + + I + FV+ GDFN N L DP + Sbjct: 168 ---------ARANSALLIIEKIKSLVSTESVFVLTGDFNASPNELPITHLKNAFRDPLEY 218 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + E + ++ IDY ++ L S++ + ++ G+ +S Sbjct: 219 IELSGPEGTFNAFNLQAPLDR-RIDYIF-----FQGLTPLSYAHLSEK----RANGRWIS 268 Query: 294 DHCPISIDYDF 304 DH P+ D + Sbjct: 269 DHLPVKFDLAY 279 >gi|126653851|ref|ZP_01725711.1| endonuclease/exonuclease/phosphatase family protein [Bacillus sp. B14905] gi|126589639|gb|EAZ83777.1| endonuclease/exonuclease/phosphatase family protein [Bacillus sp. B14905] Length = 1502 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 46/327 (14%), Positives = 90/327 (27%), Gaps = 61/327 (18%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA--KNLDADIVFLQEMGSY 77 K+ + S+N+ S + + L + DIV + E+ Sbjct: 746 ADDKLTIASYNLENFSNNKSSTTDD--------KARKLARAIGIDMKSPDIVGVTEVQDN 797 Query: 78 NAVA-----------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 N K + + + + + N N +I Sbjct: 798 NGATVGDSKADQSYKRLIDAIKAAGGVDYQ-YVNIDPINNQDGGAPNANIRVGFLYNPDR 856 Query: 121 VRVLQ------------------QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 V++ + P + + +R+ + E G+ + V+ Sbjct: 857 VKLKEGLPTGNATTAVGYQDGKLTLNPGRIDPTNAAFNSSRKPLAAQFEFQGEDVVVIAN 916 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE------SLVPFVIAGDFNRKIN 216 H S L P + Q + + + + V GDFN Sbjct: 917 HWNSKSGDTPLFGAIQPPQNGSEVQRKKIAQIVYDFVKDIKTNNKDANIVSLGDFNDY-- 974 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 + K + K DS N +D+ ++ N + ++ Sbjct: 975 ---QFAEALKIHEGQLMTNMINKVDDSDRYTYVYQGNSQVLDHILVSNNL----VNKTEI 1027 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303 +IL+ D R SDH P+ + D Sbjct: 1028 DILHINADFTDMAGRASDHDPVMVQID 1054 >gi|91977274|ref|YP_569933.1| exodeoxyribonuclease III [Rhodopseudomonas palustris BisB5] gi|91683730|gb|ABE40032.1| Exodeoxyribonuclease III [Rhodopseudomonas palustris BisB5] Length = 263 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 92/304 (30%), Gaps = 67/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N L + K + D+V LQE+ V + Sbjct: 1 MRIATWNVN----------------SVRQRIDHLVSWLKACEPDVVCLQEI---KCVDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + ++ +A+ K D +R Sbjct: 42 FPRE-------PIEALGYNIVTHGQKTFNGVALLSKYPLEEATPRLAGDETDVHARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E +V + + V ++L + +++ + Y S L + ++ ++ Sbjct: 92 --LEGVVSLKRGVVRVACLYLPNGNPVETEKYPYKLS------WMSRLLQYSKERLKTEE 143 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 P ++AGDFN + ++ + D+ Sbjct: 144 PLILAGDFNVIPQASDVYNPAGWVDDALFRPQTRESFQALLGLGLTDALRATTDAPGQYT 203 Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 I ID+ ++ A L+ D ++ SDH P+ Sbjct: 204 FWDYQAGAWQKNWGIRIDHLLLSPQATDRLVGVGI-------DSHVRSWEKPSDHVPVWA 256 Query: 301 DYDF 304 D+DF Sbjct: 257 DFDF 260 >gi|225077187|ref|ZP_03720386.1| hypothetical protein NEIFLAOT_02242 [Neisseria flavescens NRL30031/H210] gi|224951478|gb|EEG32687.1| hypothetical protein NEIFLAOT_02242 [Neisseria flavescens NRL30031/H210] Length = 256 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 88/304 (28%), Gaps = 73/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + + ADI+ LQE Sbjct: 1 MKIATWNVNSLN----------------VRLPQVQNWLADHQADILALQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ ++ + R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIISRHEPQDVH-----CGLPALPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++++ + LDS + Y Q L +++ + Sbjct: 90 RVIAATIN----GVRVINVYCVNGEALDSPKFQYKE------QWFAALTEFVRTEMAVHP 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D ++KT+ K Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWFKTLLDLGLTDSLRKVHPEGAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ + L + D +R SDH P+ Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILTSPELAATLTDVTV-------DLETRAQERPSDHAPVI 251 Query: 300 IDYD 303 ++D Sbjct: 252 AEFD 255 >gi|293604886|ref|ZP_06687283.1| exodeoxyribonuclease III [Achromobacter piechaudii ATCC 43553] gi|292816714|gb|EFF75798.1| exodeoxyribonuclease III [Achromobacter piechaudii ATCC 43553] Length = 260 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 31/305 (10%), Positives = 84/305 (27%), Gaps = 70/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N+L+ + + D++ +QE+ + Sbjct: 1 MKLATWNVNSLN----------------VRLPQVLDWLAANPVDVLCIQELKLTDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + +A+ + + Sbjct: 41 ------KFPEAAFKEAGYHAVWAGQKTYNGVAIVSRMPGTKMVRNI------PGHDDHQQ 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + L + V+ + + LDS + Y + + +++W+ ++ + Sbjct: 89 RVLALTFPSPEGDVRVVCAYCPNGQSLDSEKYQYKLA------WFEAMREWLAEEIKQYP 142 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + GD+N + + L + + + Sbjct: 143 RLAVLGDYNVAPADEDVHNPEKWEGHVLVSEPERAALRALLDLG-LTDSFRLFEQPEKSF 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ K + D R ++ SDH P+ Sbjct: 202 SWWDYRQFAFRRNAGLRIDHVLLSAPLVKRCVACVI-------DKEPRRNEQPSDHAPVV 254 Query: 300 IDYDF 304 +F Sbjct: 255 ATLEF 259 >gi|295135375|ref|YP_003586051.1| endonuclease/exonuclease/phosphatase family protein [Zunongwangia profunda SM-A87] gi|294983390|gb|ADF53855.1| endonuclease/exonuclease/phosphatase family protein [Zunongwangia profunda SM-A87] Length = 258 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 85/288 (29%), Gaps = 40/288 (13%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +V+L+++NI +E + + W + K + DI +QE Sbjct: 4 QVKLMTYNIKYANENDAENSWSYRKDW-------ITSQIKFYEPDIFGVQEALQVQIDYF 56 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD-----SF 137 + S AI + +VL+ + L + Sbjct: 57 SEHMPNYKHIGVGRDDGMKKGEYS------AIFYNSEKFKVLKNNTFWLNETPTKIKKGW 110 Query: 138 SRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 A R L E G+K W + H + A+ + + I Sbjct: 111 DAALPRICTYGLFENKKTGEKFWYFNTHFDHVG------------VKARQESAKLIFEKI 158 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 T+ P V++GDFN + + ID + + + N + Sbjct: 159 TELNTQDYPVVLSGDFNLMPDTKSIQYLSEQMIDAKGAADLVFGPEGTYNGFNFSEPVTR 218 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY + N F Y K SDH P+ ++ + Sbjct: 219 RIDYVFLSNN--------GFQVKKYAVLSDSKDLKYPSDHLPVMVELE 258 >gi|224049325|ref|XP_002191825.1| PREDICTED: CCR4 carbon catabolite repression 4-like [Taeniopygia guttata] Length = 425 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 43/300 (14%), Positives = 95/300 (31%), Gaps = 24/300 (8%) Query: 17 TASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + S + +R++ WNI L E ++ + L+ + DI+ LQE Sbjct: 130 STSSHRPIRVMQWNILAQALGEGKDNFVQCPMEALKWEERKCLILEEILAYKPDILCLQE 189 Query: 74 MGSY-NAVAKVFPKNTWCIFYSTERLINH--SKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 + Y + + + + + + + ++ D ++++ V + L Sbjct: 190 VDHYFDTFEPLLSRLGYQCTFFPKPWSPCLDVEHNNGPDGCAMFFLKERFELVNSANIRL 249 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQ 189 + K ++ A L G+ + HLK+ + S Q Sbjct: 250 MAMKLKTNQVA--IAQTLKCHETGRLFCIAVTHLKA----------RTGWERFRSAQGCD 297 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L++ + + +P ++ GDFN + + +++ N + + S Sbjct: 298 LLQNLKNITQGAKIPLIVCGDFNAEPTEEVYREFSNSSLNLNSAYKLLSPDGQSEPPYTT 357 Query: 250 NLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +DY Q+A + SDH + D+ F Sbjct: 358 WKIRPSGECRHTLDYIWYSQHALNVNSALGLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 417 >gi|53712613|ref|YP_098605.1| hypothetical protein BF1322 [Bacteroides fragilis YCH46] gi|52215478|dbj|BAD48071.1| conserved hypothetical protein [Bacteroides fragilis YCH46] Length = 285 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 38/316 (12%), Positives = 84/316 (26%), Gaps = 43/316 (13%) Query: 1 MIRKYVLALVFFLVPCTASVAQKV---RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 M + VF + + + R+ ++NI + + ++ WK + Sbjct: 1 MNKICFFIGVFITLLLAGCSSNPITHVRVATFNIRYDNLGDSLNSWKYRK-------EKV 53 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 ++ + D++ +QE+ ++ + + + Sbjct: 54 CEFIREKHPDVLGMQEVLNHQLKDLLSGLPDYAYVGVGREDGKTQGEYAPVFYRKDKYDL 113 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLEN 175 + +P K + A R A ++ GK+ +L+ H F Sbjct: 114 LDSNTFWLSEHPDSIGKLGWDAACTRVATWAKLKDKTTGKEFLMLNTH-----FDHVGTE 168 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 S L+ + + + P ++ GDFN + D+ Sbjct: 169 ARRNSALLIIDKIKEIA--------GTHPAMMTGDFNVSEEWEAYKTITSNEFVLKDAWK 220 Query: 236 RFPKEKDSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 K+ + ID+ + + Sbjct: 221 IAGKQSGEN---YTFHDFGRVPVAEREKIDFIFVTPQIKVA--------DAEIISSAITD 269 Query: 289 GKRLSDHCPISIDYDF 304 LSDH D +F Sbjct: 270 STYLSDHNAHLADLEF 285 >gi|218258829|ref|ZP_03475089.1| hypothetical protein PRABACTJOHN_00746 [Parabacteroides johnsonii DSM 18315] gi|218225190|gb|EEC97840.1| hypothetical protein PRABACTJOHN_00746 [Parabacteroides johnsonii DSM 18315] Length = 292 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 80/287 (27%), Gaps = 34/287 (11%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ + ++N+ +E++GV+ W N +++ + D DI QE + + Sbjct: 35 ELNVATFNLRMDTEKDGVNAWPNRK-------EMVKGLIRFHDFDIFGTQEGF-KHMLDG 86 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 V + + + S T P + K + N Sbjct: 87 VAELEGYAYIGAGRDDGEDAGEHSAIFYKTGRFDLLDKGNFWFSETPDVPGKGWDATCCN 146 Query: 143 RRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R +GK + + H + S + L I Q Sbjct: 147 RICSWGKFRDKESGKVFYFFNSHY-----DHQGKVARRESS-------KLLIARIKQIAG 194 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWK--TIDPNDSLIRFPKEKDSRCNANKNLR-NKIPI 257 + GDFN +D + + N+ K K I Sbjct: 195 TDATVFATGDFNAVPTDEPMVTLASDGLLLDSYGLSEQPHYGTEGTYNSFKTDSEMKNRI 254 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 DY + + Y + G+ SDH P+ I F Sbjct: 255 DYIWVTKGT---------KVKKYAVLNDMQYGRFPSDHFPVMIQVAF 292 >gi|253563360|ref|ZP_04840817.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251947136|gb|EES87418.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 285 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 38/316 (12%), Positives = 84/316 (26%), Gaps = 43/316 (13%) Query: 1 MIRKYVLALVFFLVPCTASVAQKV---RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 M + VF + + + R+ ++NI + + ++ WK + Sbjct: 1 MNKICFFIGVFITLLLAGCSSNPISHVRVATFNIRYDNLGDSLNSWKYRK-------EKV 53 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 ++ + D++ +QE+ ++ + + + Sbjct: 54 CEFIREKHPDVLGMQEVLNHQLKDLLSGLPDYAYVGVGREDGKTQGEYAPVFYRKDKYDL 113 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLEN 175 + +P K + A R A ++ GK+ +L+ H F Sbjct: 114 LDSNTFWLSEHPDSIGKLGWDAACTRVATWAKLKDKTTGKEFLMLNTH-----FDHVGTE 168 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 S L+ + + + P ++ GDFN + D+ Sbjct: 169 ARRNSALLIIDKIKEIA--------GTHPAMMTGDFNVSEEWEAYKTITSNEFVLKDAWK 220 Query: 236 RFPKEKDSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 K+ + ID+ + + Sbjct: 221 IAGKQSGEN---YTFHDFGRVPVAEREKIDFIFVTPQIKVA--------DAEIISSAITD 269 Query: 289 GKRLSDHCPISIDYDF 304 LSDH D +F Sbjct: 270 STYLSDHNAHLADLEF 285 >gi|301307706|ref|ZP_07213663.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] gi|300834380|gb|EFK64993.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] Length = 305 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 35/326 (10%), Positives = 86/326 (26%), Gaps = 47/326 (14%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K + + +F L A A+ + + ++N+ + + + Y + Q Sbjct: 1 MKKLIYSFLFLLCSVFALQAESMVVATYNLRNANAGDSTNGNG-----WGQRYPYIAQLI 55 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + DI QE + + S ++K Sbjct: 56 QFHGFDIFGTQEGKYQQLQDLKNAMPGYDYIGVGRDDGKQAGEHSAIFYR-----KEKFE 110 Query: 122 RVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + + L D + R L +L Sbjct: 111 VLDHGDFWLSTITDRPNKGWDAVLPRICTWGKFRDKQTGFTFLFFNLHM----------D 160 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----NDDFWKTIDPNDS 233 ++ A+ + + + +P ++ GDFN + N + Sbjct: 161 HIGVQARAESAKLILKKLKEF-PEKLPAILTGDFNVDQHNESYLLLDNSGIMRDSYQIAD 219 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF---LIQESFS-------------E 277 P + +A + + ID+ + + ++ +++ Sbjct: 220 FRYVPNGTFNAFHA--DRKTDSRIDHLFLTKEFDVKKYGVLTDTYRSEAKESAQKEQDAN 277 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 K + SDH P+ + + Sbjct: 278 FPKEVSMQKYVARTPSDHFPVMVVVE 303 >gi|162453061|ref|YP_001615428.1| hypothetical protein sce4785 [Sorangium cellulosum 'So ce 56'] gi|161163643|emb|CAN94948.1| probable secreted protein [Sorangium cellulosum 'So ce 56'] Length = 286 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 41/298 (13%), Positives = 80/298 (26%), Gaps = 54/298 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNA 79 +R+++ NI + ++R+ + LD D+V LQE+ + Sbjct: 25 SLRVLTLNIWN------------RHDPWEARLEVIREGLRELDPDVVGLQEVLSYEGRSL 72 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + + + + AV + Q++PL + Sbjct: 73 ADGIADGLGYEVAFGAAHDLGGGVLF-------GNAVLSRWPIARSQAFPLPTGETD--- 122 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + + I HL + + Q + D + ++ Sbjct: 123 -EKRSILLAELGSPHGAIPFFVTHLNWKFHHGA----------VREAQVAAVADIVMREA 171 Query: 200 E-SLVPFVIAGDFNRKINYLGNNDD------------FWKTIDPNDSLIRFPKEKDSRCN 246 +P ++ GDFN + F T D F + Sbjct: 172 PMEGLPPIVVGDFNAQPEATEIRFMKGLHALNQKSVYFADTFDQTGKGPGFTFDPVRNPF 231 Query: 247 ANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 A IDY + +A S + G SDH + + Sbjct: 232 AAITNEYPRRIDYVFVRGPDAQGRGKPLSSRVVFEEI----RNGVAASDHYGVLSEIS 285 >gi|32475353|ref|NP_868347.1| hypothetical protein RB8407 [Rhodopirellula baltica SH 1] gi|32445894|emb|CAD78625.1| probable secreted protein [Rhodopirellula baltica SH 1] Length = 281 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 94/320 (29%), Gaps = 69/320 (21%) Query: 1 MIRKYVLALVFFLVPCTASV---------AQK--------VRLVSWNINTLSEQEGVSLW 43 M+ +V ++F + + AQ+ +R++S+NI+ +G Sbjct: 4 MLILFVRKMLFLAIAFASFAFMLRSPLVLAQEQETNSTIRLRVLSYNIHHGRGTDG---- 59 Query: 44 KNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103 D L +++D D+V +QE+ + + T +K Sbjct: 60 -------KIDLDRLANVIRSVDPDLVAVQEVDQNTRRNGMVN-QVETLAVQTSLHGKFAK 111 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 + + AV K + + L G R + I+ ++ H Sbjct: 112 QIDYDGGEYGQAVLSKYPIESLEVHWLPGDPI----RERRIVGVAEILIHKTRLRFATTH 167 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L L +QA L + P +IAGDFN K Sbjct: 168 LHHSRAD------------LREKQATELNRLLAC---GSTPVIIAGDFNAKPAS-----L 207 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 +T+ + + +DY M +++ + Sbjct: 208 AMQTLQAKWRI-----ATTESMHTFPARSPNRQLDYVAMYPANSWRIVESEVLDEPV--- 259 Query: 284 DIKSRGKRLSDHCPISIDYD 303 SDH P+ ++ + Sbjct: 260 --------ASDHRPLLVEIE 271 >gi|296195555|ref|XP_002745450.1| PREDICTED: nocturnin [Callithrix jacchus] Length = 428 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 42/300 (14%), Positives = 96/300 (32%), Gaps = 23/300 (7%) Query: 16 CTASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 C+++ +R++ WNI L E ++ + L+ + DI+ LQ Sbjct: 133 CSSTHP-PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQ 191 Query: 73 EMGSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 E+ Y + + + + + + +N A+ + +++ + Sbjct: 192 EVDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLINSANIR 251 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQ 189 L A + A L + +G++ + HLK+ + S Q Sbjct: 252 LTAMTLKTN-QVAIAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGCD 300 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L++ + + +P ++ GDFN + +++ N + + S Sbjct: 301 LLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQSEPPYTT 360 Query: 250 NLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +DY ++A + SDH + D+ F Sbjct: 361 WKIRTSGECRHTLDYIWYSKHALNVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 420 >gi|103486507|ref|YP_616068.1| endonuclease/exonuclease/phosphatase [Sphingopyxis alaskensis RB2256] gi|98976584|gb|ABF52735.1| Endonuclease/exonuclease/phosphatase [Sphingopyxis alaskensis RB2256] Length = 289 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 39/293 (13%), Positives = 86/293 (29%), Gaps = 42/293 (14%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A + +++NI +G + W + + D++ +QE+ + Sbjct: 22 ADRFSAMTYNIRLDLASDGDNAWPHRRG-------AVTNLVGYYSPDLIGMQEVLLHQKQ 74 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD----S 136 A + S R + V ++ L D Sbjct: 75 AIEADLPRYIFVGVARDDGKEQGEFSPLGFR-----RDRFTLVASGTFWLSPTPDAPSRG 129 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + A R A ++ ++ +L ++ + A+ L+ WI Sbjct: 130 WDAALPRIASWARLKDRSSRLTLLAVNTHFDHVGKE----------ARLESARQLRRWIG 179 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFW-----KTIDPNDSLIRFPKEKDSRCNANKN- 250 + V+ GDFN ++ ++ + ++ R P + Sbjct: 180 ANRRRGETVVLMGDFNSPVDSPPHDAITDPAPGPAALHDTLAISRTPHFGPLGTFTGFDI 239 Query: 251 -LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + PID+ ++ + + ++ GK SDH P+ D Sbjct: 240 ERNDPSPIDHIFVNDGTA---------VLRHATLTQQTGGKLPSDHYPVLADL 283 >gi|254448412|ref|ZP_05061873.1| sphingomyelinase C [gamma proteobacterium HTCC5015] gi|198262025|gb|EDY86309.1| sphingomyelinase C [gamma proteobacterium HTCC5015] Length = 348 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 40/315 (12%), Positives = 94/315 (29%), Gaps = 44/315 (13%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + ++++NI L + G + R + + D++ +QE + A Sbjct: 44 DLTVMTYNILQLPDVAGDWDDAQRLARLPDAIRNMA-----VQPDVLVIQEAMTDAARNA 98 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHT----------AIAVRKKNVRVLQQSYPLLG 132 + + F + ++ S + + V + Q+ + Sbjct: 99 LEGLDDIYPFITPVVGLDCSGAGWDGTSGNCSNSPAVVRGGVMVLSRWPIEEQRQHIYQN 158 Query: 133 AKDSFSR-AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 ++ N+ + ++ G V+ H++S ++ S Q + Sbjct: 159 SQMWTGDYYSNKGFAYVRIDKGGFDYHVVGTHMQSDAGDFAV------SQQTRMAQLDEM 212 Query: 192 KDWITQKK-ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE---------K 241 + WI + + P ++ GDFN + + + D + + S Sbjct: 213 RQWIDNRAISAADPVILTGDFNVEHSRNDHLADMLQRSNSQISFPDPSIGSYSALDNLMT 272 Query: 242 DSRCNANKN-LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--------- 291 + + +DY V + ++ I DD Sbjct: 273 QANAYYYEYSQSYNDTLDYVVTRTDYLLPIVSADMQVIRLKADDSWYWDYMENINSTGMH 332 Query: 292 --LSDHCPISIDYDF 304 LSDH P+ + + Sbjct: 333 SELSDHYPVVATFRY 347 >gi|253700139|ref|YP_003021328.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M21] gi|251774989|gb|ACT17570.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M21] Length = 246 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 88/285 (30%), Gaps = 44/285 (15%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++ ++++N+++ + + + + DIV LQE+ + Sbjct: 2 SRTFSVMTYNVHSCIGTDRQLSP-----------LRIAEVIDRCNPDIVALQELDAGLPR 50 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++ + HS + A+ ++ L ++ + Sbjct: 51 TEMIDQAHLIAMTLEMSFHFHSSIHLKEGGY-GNAILSRSPVQLIKAGAVPTEP-LHPSF 108 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL--KDWITQK 198 R AV VE++G KI VL H QA+ + +W+ Sbjct: 109 ERRGAVWAEVELHGVKIQVLATHFGLNRG-------------ERVCQARAVTSHEWL-GH 154 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 E L P ++ GDFN ++ + + ++ + + ID Sbjct: 155 PECLPPAILCGDFNALFGSS-----VYRLLTRHLHDVQRKVKGRLPRGTWPAQLPFMRID 209 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + N + + + SDH P+ + + Sbjct: 210 HLFVTHNLKVRSVSVPRTPLTRV----------ASDHLPLVVTLE 244 >gi|147902412|ref|NP_001089262.1| CCR4 carbon catabolite repression 4-like [Xenopus laevis] gi|58399136|gb|AAH89295.1| MGC85016 protein [Xenopus laevis] Length = 459 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 44/300 (14%), Positives = 95/300 (31%), Gaps = 22/300 (7%) Query: 16 CTASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++ + R++ WNI L E ++ + + L+ + D++ LQ Sbjct: 163 SSSQQPRTFRVMQWNILAQALGEGKDNFIMCPMEALKWEERKYLILEEILMYQPDVLCLQ 222 Query: 73 EMGSY-NAVAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 E+ Y + + + + F + +N A+ + +++ S Sbjct: 223 EVDHYFDTFQPILSRLGYQCTFLAKPWSPCLDVEHNNGPDGCALFFLQDRFQLVNSSKIR 282 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQ 189 L A+ + A L G+ + HLK+ + Q Sbjct: 283 LSARTLKTN-QVAIAETLQCCETGRLLCFAVTHLKA----------RTGWERFRLAQGTD 331 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L + + + + VP +I GDFN + +++ N + ++ +S Sbjct: 332 LLHNLESITQGATVPLIICGDFNAEPTEEVYKRFASSSLNLNSAYKLLSEDGESEPPYTT 391 Query: 250 NL-----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +DY Q+A + + SDH + D+ F Sbjct: 392 WKIRPTGESCHTLDYIWYSQHALRVNNALGLPTEEQIGPNRLPSFNYPSDHLSLVCDFSF 451 >gi|33563248|ref|NP_033964.1| nocturnin [Mus musculus] gi|17380366|sp|O35710|NOCT_MOUSE RecName: Full=Nocturnin; AltName: Full=CCR4 protein homolog gi|5924314|gb|AAD56547.1|AF183960_1 carbon catabolite repression 4 protein homolog [Mus musculus] gi|9885278|gb|AAG01384.1|AF199491_1 NOCTURNIN [Mus musculus] gi|26352748|dbj|BAC40004.1| unnamed protein product [Mus musculus] gi|148703247|gb|EDL35194.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae), isoform CRA_c [Mus musculus] gi|187952215|gb|AAI39370.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Mus musculus] gi|223461128|gb|AAI39371.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Mus musculus] Length = 429 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 43/300 (14%), Positives = 97/300 (32%), Gaps = 23/300 (7%) Query: 16 CTASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 C++S + +R++ WNI L E ++ + L+ + DI+ LQ Sbjct: 134 CSSSHS-PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQ 192 Query: 73 EMGSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 E+ Y + + + + + + +N A+ + +++ + Sbjct: 193 EVDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLISSTNIR 252 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQ 189 L A + A L + +G++ + HLK+ + S Q Sbjct: 253 LTAMTLKTN-QVAIAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGCD 301 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L++ + + +P ++ GDFN + +++ N + + S Sbjct: 302 LLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSPDGQSEPPYTT 361 Query: 250 NLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +DY ++A + SDH + D+ F Sbjct: 362 WKIRTSGECRHTLDYIWYSRHALSVTSALDLLTEEQIGPNRLPSFHYPSDHLSLVCDFSF 421 >gi|74143502|dbj|BAE28819.1| unnamed protein product [Mus musculus] Length = 429 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 43/300 (14%), Positives = 97/300 (32%), Gaps = 23/300 (7%) Query: 16 CTASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 C++S + +R++ WNI L E ++ + L+ + DI+ LQ Sbjct: 134 CSSSHS-PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQ 192 Query: 73 EMGSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 E+ Y + + + + + + +N A+ + +++ + Sbjct: 193 EVDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLISSTNIR 252 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQ 189 L A + A L + +G++ + HLK+ + S Q Sbjct: 253 LTAMTLKTN-QVAIAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGCD 301 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L++ + + +P ++ GDFN + +++ N + + S Sbjct: 302 LLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSPDGQSEPPYTT 361 Query: 250 NLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +DY ++A + SDH + D+ F Sbjct: 362 WKIRTSGECRHTLDYIWYSRHALSVTSALDLLTEEQIGPNRLPSFHYPSDHLSLVCDFSF 421 >gi|170650688|ref|NP_612535.1| nocturnin [Rattus norvegicus] gi|149064849|gb|EDM15000.1| similar to Nocturnin (CCR4 protein homolog) [Rattus norvegicus] Length = 428 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 96/301 (31%), Gaps = 25/301 (8%) Query: 16 CTASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 C++S +R++ WNI L E ++ + L+ + DI+ LQ Sbjct: 133 CSSSHP-PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQ 191 Query: 73 EMGSY-NAVAKVFPKNTWCIFYSTERLINH--SKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 E+ Y + + + + + + + ++ D ++ + + + Sbjct: 192 EVDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQSRFKLINSTNIR 251 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-A 188 L ++ A L + +G++ + HLK+ + S Q Sbjct: 252 LTAMTLKTNQVA--IAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGC 299 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 L++ + + +P ++ GDFN + +++ N + + S Sbjct: 300 DLLQNLQNITEGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSPDGQSEPPYT 359 Query: 249 KNLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +DY ++A + SDH + D+ Sbjct: 360 TWKIRTSGECRHTLDYIWYSRHALSVTSALDLLTEEQIGPNRLPSFHYPSDHLSLVCDFS 419 Query: 304 F 304 F Sbjct: 420 F 420 >gi|301162733|emb|CBW22280.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides fragilis 638R] Length = 279 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 84/306 (27%), Gaps = 42/306 (13%) Query: 11 FFLVPC-----TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 FF C AS + V ++S+NI + ++ + W+ R + D Sbjct: 3 FFAASCGQVKQQASAPEPVNVMSFNIRYDNPEDSLDNWRYRKDR-------VANAIHFYD 55 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 DI+ QE+ + + S + Sbjct: 56 VDILGTQEVLHNQLEDLKLRLPEYGVVGVGREDGKEKGEYSALWYKKDRFNVLDSGYFWL 115 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 P + + A R A + + +++GK+ + L+ HL SL Sbjct: 116 SETPEVAGSKGWDGACERIASWVKLQDKVSGKEYFALNTHL-----DHVGGMARREGISL 170 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRFPK 239 + + L D +P ++ GDFN + + + Sbjct: 171 MLDRVNELSD--------GLPVIVTGDFNSEPESDVIKHVTDFANPEHLTDARQASPIVY 222 Query: 240 EKDSRCNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + IDY + + Y LSDH P Sbjct: 223 GPSWSFHDFGKIPYNKRPLIDYVFVRNGL---------KVLRYGILAETENNAFLSDHTP 273 Query: 298 ISIDYD 303 + + + Sbjct: 274 VLVTVE 279 >gi|291401220|ref|XP_002716984.1| PREDICTED: CCR4 carbon catabolite repression 4-like [Oryctolagus cuniculus] Length = 426 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 42/298 (14%), Positives = 93/298 (31%), Gaps = 22/298 (7%) Query: 18 ASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 S +R++ WNI L E ++ + L+ + DI+ LQE+ Sbjct: 132 PSSHPPIRVMQWNILAQALGEGKDNFVQCPLEALKWEERKCLILEEILAYQPDILCLQEV 191 Query: 75 GSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 Y + + + + + + +N A+ + +++ + L Sbjct: 192 DHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLT 251 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWL 191 A + A L + +G++ + HLK+ + S Q L Sbjct: 252 AMTLKTN-QVAIAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGCDLL 300 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 ++ + + +P ++ GDFN + +++ N + + S Sbjct: 301 QNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQSEPPYTTWK 360 Query: 252 RN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +DY ++A + SDH + D+ F Sbjct: 361 IRTSGECRHTLDYIWYSKHALSVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 418 >gi|260901207|ref|ZP_05909602.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AQ4037] gi|308106699|gb|EFO44239.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AQ4037] Length = 442 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 46/294 (15%), Positives = 90/294 (30%), Gaps = 42/294 (14%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---YN 78 Q ++L+++NI L Y L+ Y K D++ LQE+ + Sbjct: 176 QNLKLMTYNIWALPAIASHIG---------ERYELIPDYIKGY--DVLALQEVFASGRDA 224 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + ++ + + + D I R V Q +P D F+ Sbjct: 225 FLRELAKDYPYQTKMLDKD------GFNVYDGGVVIVSRYPIVNEAQYVFPDCSGTDCFA 278 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + G+ V H SF + E QQ + + + Sbjct: 279 DK---GVNYAEIIKGGQAYHVFATHTASFDTDTAREYRQRQ-----FQQMRTMAQSLN-- 328 Query: 199 KESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL------ 251 + V +GDFN + + G+ + + + S + N Sbjct: 329 IPNNETVVYSGDFNVNKLKFPGDYQQMIANLSAMEPQ--YSGYTASTFDPRINNFAGEAL 386 Query: 252 ---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +DY ++ ++ ++ + + + LSDH P+S Sbjct: 387 SGGENVEYLDYVMVSNEYGVKSFNDNRVDVPRSTAEGLWKHYNLSDHFPVSAVI 440 >gi|241662441|ref|YP_002980801.1| endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12D] gi|240864468|gb|ACS62129.1| Endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12D] Length = 818 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 44/319 (13%), Positives = 85/319 (26%), Gaps = 47/319 (14%) Query: 20 VAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 VR+ S+N+ N + + + R + ++L+AD+V L Sbjct: 454 AQADVRVASFNVLNYFNGDGKGVGFDDPANRGAKTRAEFERQEAKIVAAIRDLNADVVGL 513 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR-DSNNDIHTAIAVRKKNVRVLQQSYPL 130 E+ + + + R ++ + I AI + V P+ Sbjct: 514 MEIENDGYGELSAIRRLTTQLGADWRYVDPGIPKLGGDAITVAIIYNGRTVE------PV 567 Query: 131 LGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKS-FCFLDSLENTYSPSCS----- 182 NR+ + + V+ HLKS C S ++ Sbjct: 568 GTPATLAIDDKNRQPLARSFRRIGGTQNFTVVVNHLKSKGCSGASGKDADQGDGQSCWNP 627 Query: 183 LLSQQAQWLKDWITQKKESLVPF--VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + A + DW+ + ++ GD N K Sbjct: 628 TRVRAAGLIADWLAISPTGVADIGKLLIGDLNSYAKEDPV-----VLFADKGYADMVAKF 682 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR------------ 288 + + ID+ + + + I +E Sbjct: 683 VGTDAYSYVYGGEAGYIDHALATSGLAERVRAVHEWHINADEPIALEYSFAHKSAEQQQT 742 Query: 289 -----GKRLSDHCPISIDY 302 R SDH P+ +D Sbjct: 743 FYAPDAYRSSDHDPVLVDL 761 >gi|254229945|ref|ZP_04923347.1| endonuclease/exonuclease/phosphatase family [Vibrio sp. Ex25] gi|262394659|ref|YP_003286513.1| putative phospholipase C [Vibrio sp. Ex25] gi|151937514|gb|EDN56370.1| endonuclease/exonuclease/phosphatase family [Vibrio sp. Ex25] gi|262338253|gb|ACY52048.1| putative phospholipase C [Vibrio sp. Ex25] Length = 442 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 48/294 (16%), Positives = 93/294 (31%), Gaps = 42/294 (14%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---YN 78 Q ++L+++NI L+ Y L+ QY K D++ LQE+ + Sbjct: 176 QNLKLMTYNIWALTAIASHIGD---------RYELIPQYVKGY--DVLALQEVFASGREA 224 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + ++ + + + + +D I R V Q +P D F+ Sbjct: 225 FLRELAKEYPYQTKMLDKE------GVNIHDGGVIIVSRYPIVNEAQYVFPDCSGTDCFA 278 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + G+ V H SF + E +Q + L + Sbjct: 279 DK---GVNYAEIIKGGQAYHVFATHTASFDTDTAREYRQRQ-----FKQIRALAKSLN-- 328 Query: 199 KESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL------ 251 S V +GDFN + G+ + + + +S + N Sbjct: 329 IPSSETVVYSGDFNVNKRKFPGDYQQMIANLSAIEPQ--YSGYTESTFDPRINNFAGEAL 386 Query: 252 ---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +DY ++ ++ ++ + + LSDH P+S Sbjct: 387 SGGENVEYLDYVMVSSEYGVKSFNDNRVDVPRTTSESLWKHYNLSDHFPVSATI 440 >gi|282859573|ref|ZP_06268677.1| endonuclease/exonuclease/phosphatase family protein [Prevotella bivia JCVIHMP010] gi|282587624|gb|EFB92825.1| endonuclease/exonuclease/phosphatase family protein [Prevotella bivia JCVIHMP010] Length = 296 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 70/301 (23%), Gaps = 33/301 (10%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 AQ + + ++NI +E + +L D DI +QE Sbjct: 7 AQNLFVGTYNIRYDAESDRSEGNG-----WNVRSKVLCDMMNFEDPDIFGVQEALINQVH 61 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 N + + S + N P + A Sbjct: 62 DLKSQLNGYDYIGVGRDDGKEAGEFSAIFYKKDKLKKLANGNFWLSETPEKPGL-GWDAA 120 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R E G K +L + A+ + I + Sbjct: 121 CIRICTWGKFEEIGTKFKFYYFNLHMDHVG----------VVARREAAKLVIKRIKEIAG 170 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK--IPID 258 P ++ GDFN I + + + ++ ID Sbjct: 171 DKAPVILTGDFNVDQKDEIYKIFAESKILKDTYIAAKQRFAENGTYQGFKSDLYTESRID 230 Query: 259 YFVMDQNAYKF---LIQESFSEILYNEDDIKSRG------------KRLSDHCPISIDYD 303 + + ++ + + + K + SDH P+ Sbjct: 231 HIFVSNEFEVNHYGILTNGYWSKNASTNTTKEANAPQQISFEHYTHRLPSDHYPVLAKIH 290 Query: 304 F 304 F Sbjct: 291 F 291 >gi|298374105|ref|ZP_06984063.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] gi|298268473|gb|EFI10128.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] Length = 308 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 38/325 (11%), Positives = 83/325 (25%), Gaps = 46/325 (14%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K + + +F L A A+ + + ++N+ + + + Y + Q Sbjct: 5 MKKLIYSFLFVLCSVFALQAESMVVATYNLRNANAGDSTNGNG-----WGQRYPYIAQLV 59 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + DI QE + + + S T K Sbjct: 60 QFHGFDIFGTQEGKYHQLQDLKNAMPGYDYIGVGRDDGKQAGEYSAIFYRTG-----KFE 114 Query: 122 RVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + + L D + R L +L Sbjct: 115 VLDHGDFWLSTITDRPNKGWDAVLPRICTWGKFRDKQTGFTFLFFNLHM----------D 164 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----NDDFWKTIDPNDS 233 ++ A+ + + + +P ++ GDFN + N + Sbjct: 165 HIGVQARAESAKLILKKLKEF-PEKLPAILTGDFNVDQHNESYLLLDNSGIMRDSYQIAD 223 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR----- 288 P + +A + + ID+ + + D K+ Sbjct: 224 FRYVPNGTFNAFHA--DRKTDSRIDHLFLTKEFDVKKYGVLTDTYRSEAKDAKNEQNANF 281 Query: 289 ----------GKRLSDHCPISIDYD 303 + SDH P+ I + Sbjct: 282 PKEVSMQKHVARVPSDHFPVMIVVE 306 >gi|255008060|ref|ZP_05280186.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides fragilis 3_1_12] gi|313145777|ref|ZP_07807970.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313134544|gb|EFR51904.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 285 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 39/314 (12%), Positives = 83/314 (26%), Gaps = 39/314 (12%) Query: 1 MIRKYVL---ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 M + + L C++S VRL ++NI + + ++ WK R + Sbjct: 1 MNKICFFIGAFITLLLAGCSSSPISHVRLATFNIRYDNPGDSLNSWKYRKDR-------V 53 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 ++ + D++ +QE+ + + + + Sbjct: 54 CEFIREKQPDVLGMQEVLHHQLEDLLAGLPDYAYVGVGREDGKTQGEYAPVFYRKDKYDL 113 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + +P K + A R A ++ L ++ F Sbjct: 114 LDSNTFWLSEHPDSVGKLGWDAACTRVATWAKLKEKSTGKEFLMVNTH---FDHVGTEAR 170 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 S L+ + + + P ++ GDFN + D+ Sbjct: 171 RNSALLIIDKIKEIA--------GTHPSMMTGDFNVSEEWEAYKTITSNEFILKDAWKIA 222 Query: 238 PKEKDSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 K+ + + ID+ + + Sbjct: 223 AKQTGE---SYTFHDFGRVPVAEREKIDFIFVTPQIKVA--------DAEIISSAITDST 271 Query: 291 RLSDHCPISIDYDF 304 LSDH D +F Sbjct: 272 YLSDHNAHLADLEF 285 >gi|290512900|ref|ZP_06552264.1| exodeoxyribonuclease III [Klebsiella sp. 1_1_55] gi|289774513|gb|EFD82517.1| exodeoxyribonuclease III [Klebsiella sp. 1_1_55] Length = 301 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 38/325 (11%), Positives = 86/325 (26%), Gaps = 74/325 (22%) Query: 9 LVFFLVPCTA-SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 + + + +VA ++ VS+NIN L + L + D Sbjct: 18 FLLPSLHYSPCTVAATMKFVSFNINGL----------------RARPHQLAAIVEKHQPD 61 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 ++ LQE +FP + ++ H +A+ K+ + + Sbjct: 62 VIGLQE---TKVHDDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKDTPIAVRR 111 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 RR + + + V++ F + + Sbjct: 112 -----GFPDDGEEAQRRIIMAEIPSPFGNVTVIN-----GYFPQGESRDHETKFPAKAAF 161 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINY---------------------LGNNDDFWK 226 Q L++++ + P +I GD N L ++ Sbjct: 162 YQNLQNYLETELNKENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMD 221 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSE 277 + + + + + ID + Q + ++ Sbjct: 222 RLLGWGLVDTWRQANPDNQEHFSWFDYRSKGFDDNRGLRIDLLLASQPLAQRCVETGI-- 279 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302 D ++ SDH P+ + Sbjct: 280 -----DYEIRGMEKPSDHAPVWATF 299 >gi|225159097|ref|ZP_03725404.1| endonuclease/exonuclease/phosphatase [Opitutaceae bacterium TAV2] gi|224802303|gb|EEG20568.1| endonuclease/exonuclease/phosphatase [Opitutaceae bacterium TAV2] Length = 262 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 102/289 (35%), Gaps = 43/289 (14%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +Q +R+V++NI + + +S ++ + + NL DIV LQE+ + Sbjct: 2 SQPLRIVTYNIAHGRGLAPIQGF-SSKRQVRRNLLKISCLLANLKPDIVALQEIDENSRW 60 Query: 81 A---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A + H++R+ +++ A+ ++ + ++ +K Sbjct: 61 AGNFDHLELLRRAGRFKYAVFGVHNRREGLFNLNYGNAILSRHPILEWETTAFGSSK--- 117 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 G + + + ++I G+++ V+++HL S Q + D++ Sbjct: 118 --VGEKGFLFVEIDIGGRRVPVVNLHLHY------------RSRRHRLDQVDKVFDYLEA 163 Query: 198 KKESL-----VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 ++++ +P V+ GDFN D + + + + Sbjct: 164 RQKTTGPGWAMPPVVCGDFNAA---DSPQDATASLLSQLNHFGGYALHPLDGKRTFPSPL 220 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 +D+ ++ + E LSDH P+ ++ Sbjct: 221 PSRSLDFVLV-PEKQQVTKSEVVR-------------SYLSDHRPVMVE 255 >gi|110636350|ref|YP_676558.1| endonuclease/exonuclease/phosphatase [Mesorhizobium sp. BNC1] gi|110287334|gb|ABG65393.1| Endonuclease/exonuclease/phosphatase [Chelativorans sp. BNC1] Length = 265 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 81/280 (28%), Gaps = 56/280 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+++WNI+ +G D + + D D+V LQE+GS V Sbjct: 20 TMRVMTWNIHGGIGPDG-----------RRDLQRVVDLVRKHDPDLVALQEVGSRRKVTD 68 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 T+ + + ++ + D + A+ + + + S+ + Sbjct: 69 AAEAFTF-LLSTLGNHATETRLITAPDGNYGHALICRWPLRSTVCHDI-----SYRKRER 122 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R A+E + E + V+ HL S QAQ L D + Sbjct: 123 RAAIEAVAETPFGPLHVVAAHLGL-------------SFRERRHQAQLLADLVR---SGS 166 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 P V+ GD N D W FP + +D Sbjct: 167 APTVLMGDLN---------DWVWSGSVQTLLNRLFPGHTHFKTFPAFWPVF--ALDRIYC 215 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + SDH P+ + Sbjct: 216 RPGGM------------LARQWTDPQARTASDHLPVIAEL 243 >gi|326316303|ref|YP_004233975.1| exodeoxyribonuclease III [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373139|gb|ADX45408.1| exodeoxyribonuclease III [Acidovorax avenae subsp. avenae ATCC 19860] Length = 258 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 32/303 (10%), Positives = 88/303 (29%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N+LS + + + D + LQE+ K+ Sbjct: 1 MKLATWNVNSLS----------------VRLPQVLAWLADNPVDAIGLQEL-------KL 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ + + G +D+ +R Sbjct: 38 VDE---KFPHDAFEAAGYHAVTFGQKTYNGVAILSRAPVRDVVRN-IPGHEDAQAR---- 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ + ++ + + + + Y L W+ ++ + Sbjct: 90 -VIAATLDTPQGPLRFINCYFVNGQAPGTEKFAYK------MLWLDALHRWVREELLAHP 142 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN + D ++++ + + D + Sbjct: 143 RLVLVGDFNVAPEDRDSFDPVGLKDTIHHTVEERTHFQSLLQLGLTDAY-RMFDQPEKSF 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ++ ID+ ++ + + + D + + SDH P+ Sbjct: 202 SWWDYRMLGFQKNRGLRIDHILVSEALRGQVTACTI-------DRQPRKNPQPSDHAPVV 254 Query: 300 IDY 302 Sbjct: 255 ATL 257 >gi|328473167|gb|EGF44015.1| putative phospholipase C [Vibrio parahaemolyticus 10329] Length = 442 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 47/294 (15%), Positives = 91/294 (30%), Gaps = 42/294 (14%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---YN 78 Q ++L+++NI L Y L+ Y K D++ LQE+ + Sbjct: 176 QNLKLMTYNIWALPAIASHIG---------ERYELIPDYVKGY--DVLALQEVFASGRDA 224 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + ++ + + K + D I R V Q +P D F+ Sbjct: 225 FLRELAKEYPYQTKMLD------KKGFNVYDGGVVIVSRYPIVNEAQYVFPDCSGTDCFA 278 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + G+ V H SF + E QQ + + + Sbjct: 279 DK---GVNYAEIIKGGQAYHVFATHTASFDTDTAREYRQRQ-----FQQMRTMAQSLN-- 328 Query: 199 KESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL------ 251 + V +GDFN + + G+ + + + S + N Sbjct: 329 IPNNETVVYSGDFNVNKLKFPGDYQQMIANLSAMEPQ--YSGYTASTFDPRINNFAGEAL 386 Query: 252 ---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +DY ++ ++ ++ + + + LSDH P+S Sbjct: 387 SGGENVEYLDYVMVSNEYGVKSFNDNRVDVPRSTAEGLWKHYNLSDHFPVSAVI 440 >gi|150376190|ref|YP_001312786.1| endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419] gi|150030737|gb|ABR62853.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419] Length = 242 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 39/284 (13%), Positives = 86/284 (30%), Gaps = 49/284 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 Q++R +++N+++ + D + D++ LQE+ A Sbjct: 3 QRIRFLTYNVHSCFGTDR-----------KLDPARIAAVIAECRPDVIALQEVDVGRART 51 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + H D AV L ++ PL + Sbjct: 52 GGIDQAHMIATHLSMDAQFHP-ALHLEDEKYGDAVLTALPMRLIRAAPLPSSG------E 104 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKK 199 R A+ + ++ G K+ V+ HL + +QA L W+ + Sbjct: 105 PRGALWVEIDAAGVKLQVIVTHLGLRG-------------AERLRQATALLGPGWLGAME 151 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 + ++AGD N + + + + K ++ ID+ Sbjct: 152 QGKTRLILAGDLNAT-GRSASYRLLARQLKD---VQLLTGNKPRPTFPSRLPLL--RIDH 205 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ ++ + + SDH P+ + D Sbjct: 206 VLIGD--CIEVVSCQVH--------SSALARSASDHLPLLTELD 239 >gi|262382995|ref|ZP_06076132.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262295873|gb|EEY83804.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 305 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 37/326 (11%), Positives = 86/326 (26%), Gaps = 47/326 (14%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K + + +F L A A+ + + ++N+ + + + Y + Q Sbjct: 1 MKKLIYSFLFLLCSVFALQAESMVVATYNLRNANAGDSTNGNG-----WGQRYPYIAQLI 55 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + DI QE + + S ++K Sbjct: 56 QFHGFDIFGTQEGKYQQLQDLKNVMPGYDYIGVGRDDGKQAGEHSAIFYR-----KEKFE 110 Query: 122 RVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + + L D + R L +L Sbjct: 111 VLDHGDFWLSTITDRPNKGWDAVLPRICTWGKFRDKQTGFTFLFFNLHM----------D 160 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----NDDFWKTIDPNDS 233 ++ A+ + + + +P ++ GDFN + N + Sbjct: 161 HIGVQARAESAKLILKKLKEF-PEKLPAILTGDFNVDQHNESYLLLDNSGIMRDSYQIAD 219 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF---LIQESFS-------------E 277 P + +A + + ID+ + + ++ +S+ Sbjct: 220 FRYVPNGTFNAFHA--DRKTDSRIDHLFLTKEFDVKKYGVLTDSYRSEAKESTEKEQNAN 277 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 K + SDH P+ I + Sbjct: 278 FPKEVSMQKYVARTPSDHFPVMIVVE 303 >gi|146299325|ref|YP_001193916.1| endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae UW101] gi|146153743|gb|ABQ04597.1| Endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae UW101] Length = 279 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 87/306 (28%), Gaps = 31/306 (10%) Query: 2 IRKY--VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 ++K ++ +V L+ + Q ++++++NI +G + W Sbjct: 1 MKKINSIVFVVMLLLVSSTFYGQNLKIMTYNIRLDVASDGENAWPKRK-------DYFTS 53 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 + DI +QE + F + + V Sbjct: 54 QIQFYSPDIFGVQEATPGQVNYIASALPNYSKFGVGREEGGLGEACTIYYKKDRFKVLDS 113 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 N L ++ ++ + A NR L + K +L E Sbjct: 114 NTFWLSETPNVVS--RGWDAACNRVCTYGLFKDLKTKKTFYVFNLHL---DHMGEVARIK 168 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 L + + L P + GDFN + + K +D + + Sbjct: 169 GVQLALSKMKELN-------TKNYPAFLMGDFNSEPETAQI-AEIKKVMDDTKDVSKEKP 220 Query: 240 EKDSRCNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 S + + +DY + +N + + K SDH P Sbjct: 221 FGPSGTFNDFKHNEPVTLLLDYIFISKN-------SGLTVQKHAVLSDSKDLKYPSDHLP 273 Query: 298 ISIDYD 303 + I+ D Sbjct: 274 VFIEID 279 >gi|68433741|ref|XP_700794.1| PREDICTED: nocturnin [Danio rerio] Length = 432 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 44/308 (14%), Positives = 90/308 (29%), Gaps = 17/308 (5%) Query: 11 FFLVPCTASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 F + + +R++ WNI L E ++G + L+ + D Sbjct: 120 FIMTRACSLQNSPLRIMQWNILAQALGEGKDGFVRCPMEALNWSERKYLILEEILTYRPD 179 Query: 68 IVFLQEMGSY-NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +V LQE+ Y + V + + + +NN + + Sbjct: 180 VVCLQEVDHYFDTFQPVLSSLGYQSSFCPKPCSPCLDVHNNNGPDGCALFFNRRRFQMLH 239 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 + L + L ++ G+ V HLK+ ++ S + L Q Sbjct: 240 TAHLRLSAMMLKTNQVAVVATLRCKLTGRVFCVAVTHLKARSGWEA---FRSAQGANLLQ 296 Query: 187 QAQWLK-----DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 Q + + + +P ++ GDFN + N ++ + ++ Sbjct: 297 QLHEITSQSNPEMHQDDQTEGIPLIVCGDFNAEPNEEVYRHFRSSSLGLDSVYKCLSDDR 356 Query: 242 DSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +DY + A++ D SDH Sbjct: 357 TTEPPYTSWKIRPSGECCSTLDYIWYSEKAFEVDAVLRIPSEEQIGPDRLPSFHYPSDHL 416 Query: 297 PISIDYDF 304 + D F Sbjct: 417 SLVCDLSF 424 >gi|39422|emb|CAA45501.1| hybrid cereolysin AB [Bacillus cereus] Length = 592 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 100/313 (31%), Gaps = 37/313 (11%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 289 PTDQNNTLKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVVILNEVFD 342 Query: 77 YNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 +A ++ T E S+ +A+ K V + Sbjct: 343 NSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKIQ 402 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Q Sbjct: 403 Y-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTNQ 457 Query: 188 AQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKEK 241 + ++D+I + + + GD N N +KT+ + Sbjct: 458 LKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTAT 517 Query: 242 DSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR----- 291 N +DY + ++ E+ + + + Sbjct: 518 WDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTYD 577 Query: 292 -LSDHCPISIDYD 303 SDH P++ Sbjct: 578 DYSDHYPVAATIS 590 >gi|218961593|ref|YP_001741368.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] gi|167730250|emb|CAO81162.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] Length = 302 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 40/289 (13%), Positives = 92/289 (31%), Gaps = 34/289 (11%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + + +++WN+ E D T L++ L+A+++ QE+ YNA Sbjct: 41 SNTLDVITWNLRNFPEGT--------------DLTTLKEMISALNAEVIAFQEIMDYNAF 86 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + + A ++V + Q ++ S Sbjct: 87 MDLAEDIPYYAACVYSATDTY---------RLAYLYDTRSVTLNNQYTIF----ENDSNP 133 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R L + N ++++ H K++ E+ Q L ++I+ Sbjct: 134 FPRPPYILDITWNNSNYFIINNHFKAYGDNYIDESDSWDEEMRRRLACQKLDNYISTSLS 193 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP-KEKDSRCNAN-KNLRNKIPID 258 ++ GD N +I + + F ++ + S +N + ID Sbjct: 194 DKK-VIVLGDLNDQIAEPEDYNVFLSFLNKPEEYYFADMPIALSPTYSNVSYPSSLSHID 252 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIK----SRGKRLSDHCPISIDYD 303 + ++ ++ ++ + +SDH P+ I Sbjct: 253 HILITNELFEDFENAGSYCRTILAENWMLSWNTYSSTISDHRPVGIRIS 301 >gi|307130940|ref|YP_003882956.1| exonuclease III [Dickeya dadantii 3937] gi|306528469|gb|ADM98399.1| exonuclease III [Dickeya dadantii 3937] Length = 268 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 84/311 (27%), Gaps = 73/311 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + F + H +A+ K + + +D+ R Sbjct: 42 FPLDEVKQF-------GYHVFYHGQKGHYGVALLTKAEPLAVRRGFPTDEEDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F ++ ++ Q L+ ++ Q ++ Sbjct: 90 RIIMADLATPLGTLTVVN-----GYFPQGESRDHAVKFPAKTRFYQDLQHYLEQHHQADQ 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + + F Sbjct: 145 PVLIMGDMNISPTDLDIGIGEDNRKRWLRTGKCSFLPEEREWMERLKNWGLVDTFRAANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + D ++ S Sbjct: 205 ECQDRFSWFDYRSAGFDDNRGLRIDLIMATAPLASRCAATGI-------DYAIRGMEKPS 257 Query: 294 DHCPISIDYDF 304 DH P+ ++ F Sbjct: 258 DHAPVWAEFTF 268 >gi|152965406|ref|YP_001361190.1| endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans SRS30216] gi|151359923|gb|ABS02926.1| Endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans SRS30216] Length = 291 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 45/318 (14%), Positives = 95/318 (29%), Gaps = 55/318 (17%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + T + +R+++WN+ + + D+V LQ Sbjct: 1 MSTPTPAPGAPLRVMTWNLWWRFGD------------WRARREAILAVLAQERPDVVGLQ 48 Query: 73 EM---GSYNAVAKVFPKNTWCIFYSTERLINHSKR---------DSNNDIHTAIAVRKKN 120 E+ N + + + +S +R + + AV ++ Sbjct: 49 EVWADEGENLAQWLGERLGMHVAWSPSPAPQRWRRRLAWNGEDPAVVDGLQFGNAVLSRH 108 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + Q+ L G D R A+++LV+ + + HL S Sbjct: 109 PLLDQEVRELPGGGDED---EGRTALKVLVDAPRRPLPFTTTHLNSSP----------AE 155 Query: 181 CSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFW-------KTIDPN 231 ++ +Q + L ++ ++ P V+ GDFN + Sbjct: 156 SAVRVEQVRALVPFVVGGHRRGEHYPPVLTGDFNAVAESDELRLAGGYLTPGPVPGVVLV 215 Query: 232 DSLIRFPKEKDSRCNANKN------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 DS + +N + ID+ ++ F + S ++ Sbjct: 216 DSWRFAAPDDPGFTWDRRNPFVARVHQPSARIDHVLV--GLPPFTGEGSVRDVRL-VATE 272 Query: 286 KSRGKRLSDHCPISIDYD 303 G SDH + +D + Sbjct: 273 PVGGVWASDHAAVVVDLE 290 >gi|192291575|ref|YP_001992180.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1] gi|192285324|gb|ACF01705.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1] Length = 263 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 93/303 (30%), Gaps = 67/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N L + ++ D+V LQE+ V + Sbjct: 1 MRIATWNVN----------------SVRQRLDHLVSWLQDCQPDVVCLQEI---KCVDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + ++ +A+ K D +R Sbjct: 42 FPRE-------PIEALGYNVVTHGQKTFNGVALLSKYPLEEANPGLAGDESDVHARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E +V + + V ++L + + S + Y S L+D+ Q+ ++ Sbjct: 92 --LEGVVSLKHGVVRVACLYLPNGNPVGSEKYPYKLS------WMARLRDYAQQRLKTEE 143 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 P ++AGDFN ++ ++T+ D+ Sbjct: 144 PLILAGDFNVIPQAEDVHNPAAWTEDALFRPETRESFQTLLGLGLTDALRATTDAPGQYT 203 Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 I ID+ ++ A L D ++ SDH P+ Sbjct: 204 FWDYQAGAWQKNWGIRIDHLLLSPQAADRLRHVGI-------DSYVRNWEKPSDHVPVWA 256 Query: 301 DYD 303 D+D Sbjct: 257 DFD 259 >gi|254506370|ref|ZP_05118513.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus 16] gi|219550850|gb|EED27832.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus 16] Length = 442 Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 94/297 (31%), Gaps = 42/297 (14%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-- 76 + Q ++L+++NI L Y L+ Y K D++ LQE+ + Sbjct: 173 TDEQNLKLMTYNIWALPAIASHIGD---------RYELIPDYVKGY--DVLALQEVFASG 221 Query: 77 -YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + ++ + + + + +D I R V Q +P D Sbjct: 222 RDAFLRELAKEYPYQTKMLDKD------GFNIHDGGVVIVSRYPIVNQAQYVFPDCSGTD 275 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 F+ + G+ V H SF + E +Q + + + Sbjct: 276 CFADK---GVNYAEIIKGGQAYHVFATHTASFDTDTAREYRQRQ-----FKQMRAMAKSL 327 Query: 196 TQKKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--- 251 + V +GDFN + + G+ + + R+ S + N Sbjct: 328 N--IPNGETVVYSGDFNVNKLKFPGDYQQMIANLSAIEP--RYSGYTASTFDPRINNFAG 383 Query: 252 ------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +DY ++ ++ ++ + + + LSDH P+S Sbjct: 384 EALSGGENVEYLDYVMVSNEYGVKSFNDNRVDVPRSTAESLWKHYNLSDHFPVSAVI 440 >gi|190573815|ref|YP_001971660.1| hypothetical protein Smlt1836 [Stenotrophomonas maltophilia K279a] gi|190011737|emb|CAQ45357.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a] Length = 298 Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats. Identities = 38/289 (13%), Positives = 91/289 (31%), Gaps = 33/289 (11%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A+ ++++S+N+ KR + + + ++ QE+ Sbjct: 38 AAAPAPLKVMSFNVR-------TPADTEPGKRWPDRRDAMVKVILDAHPAVIGTQELVKE 90 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A + F R + + +++ P + ++ Sbjct: 91 QADYLSEHLRGYRWFGEGRR-GGSGDEHMGVFYDSKVLAIEESGNFWLSDTPDVPGSITW 149 Query: 138 SRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R L +G++ + ++ HL D E L+ ++ + L Sbjct: 150 GNLYPRMVTWALFRRLDDGRRFYFMNTHLPYR---DEDEPRRVKGAELIGKRVEAL---- 202 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + +P V+ GDFN + F + + + ++ P+ + Sbjct: 203 ----PADLPVVLTGDFNSEPG-GDTYKAFTRLLQDTRTQVKVPQGPRLTFHDFTGKATVQ 257 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +D+ ++ F + DD + G SDH P+ ++ D+ Sbjct: 258 -LDWVLVRG----------FHARSFLTDDRRIDGVLPSDHFPLVVELDW 295 >gi|151554255|gb|AAI49516.1| CCRN4L protein [Bos taurus] Length = 361 Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 93/306 (30%), Gaps = 23/306 (7%) Query: 11 FFLVPCTASVAQK-VRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 F +P + +R++ WNI L E ++ + L+ + Sbjct: 63 FVALPADGPSSHPPIRVMQWNILAQALGEGKDNFVQCPMEALKWEERKCLILEEILAYQP 122 Query: 67 DIVFLQEMGSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVL 124 DI+ LQE+ Y + + + + + + +N A+ + +++ Sbjct: 123 DILCLQEVDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLV 182 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + L A + A L + + ++ + HLK+ + Sbjct: 183 NSANIRLTAMTLKTN-QVAIAQTLECKESSRQFCIAVTHLKA----------RTGWERFR 231 Query: 185 SQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 S Q L + + + +P ++ GDFN + +++ N + + S Sbjct: 232 SAQGCDLLQNLQTITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQS 291 Query: 244 RCNANKNLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +DY + A + SDH + Sbjct: 292 EPPYTTWKIRTSGECRHTLDYIWYSRQALSVRSALDLLTEEQIGPNRLPSFNYPSDHLSL 351 Query: 299 SIDYDF 304 D+ F Sbjct: 352 VCDFTF 357 >gi|198275762|ref|ZP_03208293.1| hypothetical protein BACPLE_01937 [Bacteroides plebeius DSM 17135] gi|198271391|gb|EDY95661.1| hypothetical protein BACPLE_01937 [Bacteroides plebeius DSM 17135] Length = 339 Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats. Identities = 44/343 (12%), Positives = 102/343 (29%), Gaps = 50/343 (14%) Query: 2 IRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSV----------- 47 +RK + +L++ + +A+ AQ R++ +N+ L + SL +++ Sbjct: 1 MRKLIYSLLWAVCGMSAAPAQAQHAFRVMEYNVENLFDCRHDSLKQDTEFLPGSVRNWTY 60 Query: 48 KRTTSDYTLLRQYA----KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103 R + + K D+V L E+ + + + + + + Sbjct: 61 SRFQDKVNKIGKVILAAGKEQVPDLVGLCEVENDYCLKSLTRYSPLREVGYKYVMTSSPD 120 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDI 162 I A+ + + R+L + DS R + + + +G + V Sbjct: 121 E---RGIDVALLYQPVSFRLLASQ-KIRIPSDSLGMRPTRDVLYVSGRVVSGDTLDVFVC 176 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL S + Y + +QA + +I GDFN + + Sbjct: 177 HLPSRVGEAKKTDPYRLWVARRIRQAAD----SVMAERQNPRLIIMGDFNDYPDGKSLQE 232 Query: 223 DFW--KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK--------FLIQ 272 +S + + + + + +D V++ + Sbjct: 233 GIRVSALAGQPESRVLYNLMDNQQGGTYRYKGEWGVLDQMVVNGGLLQPDARTRTSKEKA 292 Query: 273 ESFS-------------EILYNEDDIKSRGKRLSDHCPISIDY 302 + + SDH P+ ++ Sbjct: 293 SILRFPFLLEEDNVYGGDTPFRTYKGMRYHGGYSDHLPVLLEL 335 >gi|149638074|ref|XP_001509853.1| PREDICTED: similar to CCR4 carbon catabolite repression 4-like [Ornithorhynchus anatinus] Length = 617 Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats. Identities = 41/299 (13%), Positives = 93/299 (31%), Gaps = 24/299 (8%) Query: 18 ASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 S + +R++ WNI L E ++ + L+ + DI+ LQE+ Sbjct: 187 TSSHRPIRVMQWNILAQALGEGKDNFVQCPAEALKWEERKCLILEEILGYQPDILCLQEV 246 Query: 75 GSY-NAVAKVFPKNTWCIFYSTERLINH--SKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + + + + + + + + ++ D +R + V + L+ Sbjct: 247 DHFFDTFQPLLSRLGYRGTFFPKPWSPCLDVEHNNGPDGCALFFLRDRFELVESTNIRLM 306 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 ++ A L + G+ V HLK+ + L + L Sbjct: 307 ALTLKTNQVA--IAQTLRCQETGRLFCVAVTHLKARTGWERLRSAQGSDL---------L 355 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 ++ + + +P ++ GDFN + +++ N + + Sbjct: 356 RNLCAITRGAEIPLIVCGDFNAEPTEEVYRHFATSSLNLNSAYKLLSSD-GQTEPPYTTW 414 Query: 252 R------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + +DY Q A + + SDH + D+ F Sbjct: 415 KVRASGEARHTLDYIWYSQRALRVESALGLLTEEQIGPNRLPSLHYPSDHLSLVCDFGF 473 >gi|257056393|ref|YP_003134225.1| metal-dependent hydrolase [Saccharomonospora viridis DSM 43017] gi|256586265|gb|ACU97398.1| metal-dependent hydrolase [Saccharomonospora viridis DSM 43017] Length = 286 Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 96/314 (30%), Gaps = 64/314 (20%) Query: 7 LALVFFLVPCTASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 L L+ ++ + + + +R++S+NI+T +GV SD + Sbjct: 16 LTLLTAMLTVPGTASAEPRHGPRVLRVMSYNIHTGIGTDGV-----------SDLGRIAS 64 Query: 60 YAKNLDADIVFLQEMGSYNA--------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 ++ D D+V LQE+ + A ++ ++++ ++ + Sbjct: 65 VIRDADVDVVALQEVDVHWADRSDYVDQATELARLTDMSVYFAPIYDLDP-EPGREERRR 123 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR---RAVELLVEINGKKIWVLDIHLKSFC 168 +AV ++ + ++ + A E++V + G + V + HL Sbjct: 124 YGVAVLSRHPVLSATNHEISRLSTVEPGAEPEPMPGFAEVVVSVRGLPVHVYNTHL---- 179 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 Y P ++ S+Q + D + Q ++ GDFN + ++ + Sbjct: 180 -------DYRPDPTVRSRQVTEMLDILRQD-PPRAHQLLLGDFNAEPA-APELAPLFERL 230 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 IDY E Sbjct: 231 RDAW-------GTRGGGLTYPAEDPVKRIDYITAGGGVRVLNASVPAVE----------- 272 Query: 289 GKRLSDHCPISIDY 302 SDH P+ Sbjct: 273 ---ASDHRPVVATL 283 >gi|262371629|ref|ZP_06064908.1| conserved hypothetical protein [Acinetobacter junii SH205] gi|262311654|gb|EEY92739.1| conserved hypothetical protein [Acinetobacter junii SH205] Length = 446 Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats. Identities = 48/300 (16%), Positives = 96/300 (32%), Gaps = 38/300 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIVFLQEM 74 ++ A +++++S+NI L L + +L+ D++ LQE Sbjct: 172 PVSNSADELKVLSYNIYALPMVASKIS------------ERLAELPNHLNGYDVILLQEA 219 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 S + + + + + + + N + + V + V Sbjct: 220 FSSSRTSMLNQLAQQYPYQTHVPVGS-----GYNLYDSGVLVLSRYPIVKTAEMIYPDCT 274 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + A + + + NGK V H SF + +L Q + ++ Sbjct: 275 GTDCFAD-KGVIYAEIIKNGKAYHVTSTHTASFDTD--------EARALRQVQFKQIRQL 325 Query: 195 ITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL-- 251 I Q+ S ++ GDFN +L D + N + S + N Sbjct: 326 INQQNIPSFDAVLMGGDFNVN-KFLWPQDYQDMLTNLNATAPISTGYTASTFDPRVNKLA 384 Query: 252 -------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +DY V + + + IL + D LSDH P+ +++ Sbjct: 385 GAAGSGGTTVEYLDYVVSSNTHRQPIQSRNDVRILRSTADPLYMTWDLSDHFPVMGHFNY 444 >gi|126723004|ref|NP_001075923.1| nocturnin [Bos taurus] gi|126010657|gb|AAI33609.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Bos taurus] gi|296478738|gb|DAA20853.1| CCR4 carbon catabolite repression 4-like [Bos taurus] Length = 427 Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 93/306 (30%), Gaps = 23/306 (7%) Query: 11 FFLVPCTASVAQK-VRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 F +P + +R++ WNI L E ++ + L+ + Sbjct: 129 FVALPADGPSSHPPIRVMQWNILAQALGEGKDNFVQCPMEALKWEERKCLILEEILAYQP 188 Query: 67 DIVFLQEMGSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVL 124 DI+ LQE+ Y + + + + + + +N A+ + +++ Sbjct: 189 DILCLQEVDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLV 248 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + L A + A L + + ++ + HLK+ + Sbjct: 249 NSANIRLTAMTLKTN-QVAIAQTLECKESSRQFCIAVTHLKA----------RTGWERFR 297 Query: 185 SQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 S Q L + + + +P ++ GDFN + +++ N + + S Sbjct: 298 SAQGCDLLQNLQTITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQS 357 Query: 244 RCNANKNLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +DY + A + SDH + Sbjct: 358 EPPYTTWKIRTSGECRHTLDYIWYSRQALSVRSALDLLTEEQIGPNRLPSFNYPSDHLSL 417 Query: 299 SIDYDF 304 D+ F Sbjct: 418 VCDFTF 423 >gi|256838623|ref|ZP_05544133.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256739542|gb|EEU52866.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 304 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 37/325 (11%), Positives = 83/325 (25%), Gaps = 46/325 (14%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K + + +F L A A+ + + ++N+ + + + Y + Q Sbjct: 1 MKKLIYSFLFLLCSVFALQAESMVVATYNLRNANAGDSTNGNG-----WGQRYPYIAQLI 55 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + DI QE + + S ++K Sbjct: 56 QFHGFDIFGTQEGKYQQLQDLKNAMPGYDYIGVGRDDGKQAGEHSAIFYR-----KEKFE 110 Query: 122 RVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + + L D + R L +L Sbjct: 111 VLDHGDFWLSTITDRPNKGWDAVLPRICTWGKFRDKQTGFTFLFFNLHM----------D 160 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----NDDFWKTIDPNDS 233 ++ A+ + + + +P ++ GDFN + N + Sbjct: 161 HIGVQARAESAKLILKKLKEF-PEKLPAILTGDFNVDQHNESYLLLDNSGIMRDSYQIAD 219 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR----- 288 P + +A + + ID+ + + D K+ Sbjct: 220 FRYVPNGTFNAFHA--DRKTDSRIDHLFLTKEFDVKKYGVLTDTYRSEAKDAKNEQNANF 277 Query: 289 ----------GKRLSDHCPISIDYD 303 + SDH P+ I + Sbjct: 278 PKEVSMQKHVARVPSDHFPVMIVVE 302 >gi|153872789|ref|ZP_02001579.1| Endonuclease/Exonuclease/phosphatase [Beggiatoa sp. PS] gi|152070745|gb|EDN68421.1| Endonuclease/Exonuclease/phosphatase [Beggiatoa sp. PS] Length = 733 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 45/331 (13%), Positives = 96/331 (29%), Gaps = 51/331 (15%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY----TLLRQYAKNLDADIVF 70 +V +++ S+N+ + +++ L +DADI Sbjct: 26 STPPTVDGTLKIASFNVLNYFNTIDNGSNDARGADSETEFTRQTEKLMATLSAIDADIFG 85 Query: 71 LQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVL 124 L E+ + +A+ ++ + T +N ++ I A+ + V ++ Sbjct: 86 LVEVENNGYGTGSAIEQLVNALNAKVGTDTYDFVNPGLSTLGSDKIAVALLYKPATVTLV 145 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCF------LDSLENT 176 + + R + E G+K + H KS + + Sbjct: 146 GNAVTKTDGAFANYN---RPPLVQTFEEQATGEKFTIAINHFKSKGSLTGLSQDNDQNDG 202 Query: 177 YSPSCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + +Q AQ L W+ + F+I GD N TI Sbjct: 203 QGNNNYTRTQAAQELTTWLATDPTNSGDPDFLIIGDLNAYAQEAPI-----VTIQNAGYT 257 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----- 289 + ++ + + +D+ + + + + S I +E + Sbjct: 258 NLLDTYQGTKAYSYIFDGQRGYLDHALANNSLTAQVTGVSEWPINADEPSVFDYNDGVTD 317 Query: 290 ------------------KRLSDHCPISIDY 302 R SDH P+ I Sbjct: 318 TSSSTDIVNPAGLYSISPFRSSDHDPVLIGL 348 >gi|150396373|ref|YP_001326840.1| exodeoxyribonuclease III Xth [Sinorhizobium medicae WSM419] gi|150027888|gb|ABR60005.1| exodeoxyribonuclease III Xth [Sinorhizobium medicae WSM419] Length = 263 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 92/305 (30%), Gaps = 69/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + L + K + DI LQE+ S + Sbjct: 1 MKIATWNING----------------VKARLDGLVGWLKESNPDIACLQEIKSIDDA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ K A D SR Sbjct: 42 -------FPRGEIESLGYHVETHGQKGFNGVALLSKLRPDEVNRGLPGDASDEQSRF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + +NG + V ++L + +++ + Y + + L + Q+ Sbjct: 92 --IEGVFSVNGGALRVCCLYLPNGNPVETEKYPYKLA------WMRRLAAFAEQRLMLEE 143 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++AGD+N YL ++ + N + Sbjct: 144 PLILAGDYNVIPEPHDCWDVKVWRNDALYLPETRAAFRRL-RNLGFTDAVRATSDEAPLY 202 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ A L+ S + + ++ SDH P++ Sbjct: 203 SFWDYQAGCWPKNLGIRIDHLMLSPEAADKLVSTSIEKHV-------RSWEKPSDHVPVT 255 Query: 300 IDYDF 304 ++ F Sbjct: 256 AEFAF 260 >gi|253682566|ref|ZP_04863363.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum D str. 1873] gi|253562278|gb|EES91730.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum D str. 1873] Length = 631 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 50/333 (15%), Positives = 89/333 (26%), Gaps = 65/333 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 K+ + S+N+ S R + + K+ DIV L E+ + Sbjct: 315 PDKDKLSIASYNVENFSAVTD-------KTRIDKVAKSIVENLKS--PDIVGLIEIQDND 365 Query: 79 AVAKVFPKN------------------------TWCIFYSTERLINHSKRDSNNDIHTAI 114 K F + + + +I Sbjct: 366 GADSKNKKEAKSTEVKADKTYKALIDAINNNKGPQYDFVNIDPINRQDGGIPGGNIRVGY 425 Query: 115 AVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 RK V ++ + P D G R+++ E G+K+ Sbjct: 426 IYRKDRVNLVSKPKGDAKTEVHMDGKDLAINPGRIGVDKEEFKGTRKSLAAEFEFKGEKV 485 Query: 158 WVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK--KESLVPFVIAGDF 211 +V+ H S SL P S L +QA + + + V+ GD Sbjct: 486 FVIANHFSSKRGDQSLFGAKQPPVAGSERLRMKQASIVNKFAEEILKANPNGNVVLLGDM 545 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N + K + N +D ++++N Sbjct: 546 NDFNFSNTV-----TALKGKSFENMVDKLPAEERFTYIHQGNSQVLDNILVNKNIVLKTK 600 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ + D SDH P+ I DF Sbjct: 601 VDAVNINSAFTDAQGRC----SDHDPVLIQIDF 629 >gi|237800675|ref|ZP_04589136.1| exonuclease III [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023534|gb|EGI03591.1| exonuclease III [Pseudomonas syringae pv. oryzae str. 1_6] Length = 270 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 82/312 (26%), Gaps = 74/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L + D++ LQE + Sbjct: 1 MKIVSFNINGL----------------RARPHQLAALIEKHQPDVIGLQETKVSDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + + H +A+ +N + G + + R Sbjct: 41 ------QFPHADIEALGYHVHFHGQKGHYGVALLSRNPPLDLHK----GFEGDDEESQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + NG+ + +++ F + + + L+ + + Sbjct: 91 FIRGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQSLLESHFSNEQ 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 P ++ GD N ++L ++ + + + F Sbjct: 146 PLIVMGDVNISPEDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRYLNP 205 Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + + D ++ Sbjct: 206 EVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKAAGV-------DYDLRGMEK 258 Query: 292 LSDHCPISIDYD 303 SDH PI ++ Sbjct: 259 PSDHAPIWLELS 270 >gi|265762754|ref|ZP_06091322.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263255362|gb|EEZ26708.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 285 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 37/316 (11%), Positives = 83/316 (26%), Gaps = 43/316 (13%) Query: 1 MIRKYVLALVFFLVPCTASVAQKV---RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 M + VF + + + R+ ++NI + + ++ WK + Sbjct: 1 MNKICFFIGVFITLLLAGCSSNPITHVRVATFNIRYDNPGDSLNSWKYRK-------EKV 53 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 ++ + D++ +QE+ ++ + + + Sbjct: 54 CEFIREKHPDVLGMQEVLNHQLKDLLSGLPDYAYVGVGREDGKTQGEYAPVFYRKDKYDL 113 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLEN 175 + +P K + A R A ++ GK+ +L+ H F Sbjct: 114 LDSNTFWLSEHPDSIGKLGWDAACTRVATWAKLKDKTTGKEFLMLNTH-----FDHVGTE 168 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 S L+ + + + ++ GDFN + D+ Sbjct: 169 ARRNSALLIIDKIKEIA--------GTHSAMMTGDFNVSEEWEAYKTITSNEFVLKDAWK 220 Query: 236 RFPKEKDSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 K+ + ID+ + + Sbjct: 221 IAGKQSGEN---YTFHDFGRVPVAEREKIDFIFVTPQIKVA--------DAEIISSAITD 269 Query: 289 GKRLSDHCPISIDYDF 304 LSDH D +F Sbjct: 270 STYLSDHNAHLADLEF 285 >gi|296129478|ref|YP_003636728.1| 5'-Nucleotidase domain protein [Cellulomonas flavigena DSM 20109] gi|296021293|gb|ADG74529.1| 5'-Nucleotidase domain protein [Cellulomonas flavigena DSM 20109] Length = 1652 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 102/348 (29%), Gaps = 64/348 (18%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQ----------------EGVSLWKNSVKRTTSDYT-- 55 P A+V V + S+N+ + V++ +R D Sbjct: 474 TPTPAAVGGDVTVASFNVLNYFTTLGADTAACEAYRDRAGDPVTVSTGCAQRGAWDPDDL 533 Query: 56 -----LLRQYAKNLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHS 102 + LDAD+V L E+ + A+ + T + S Sbjct: 534 QRQQDKIVAAIDALDADVVGLLEIENSAVVDGVADEALGTLVDALNAAAGAGTWAFVPSS 593 Query: 103 KRDSN----NDIHTAIAVRKKNVRVLQQSYPLLG---AKDSFSRAGNRRAVELLVEINGK 155 + + I A+ R +V +S L + +F+ A A G+ Sbjct: 594 DELPDVALQDTITNALIYRTASVERTGESRALGTASASGQAFANAREPIAQAFTPVGGGE 653 Query: 156 KIWVLDIHLKS-----FCFLDSLENTYSPSCSL-LSQQAQWLKDWITQKKESLVPFVIAG 209 + V+ HLKS D+ + + +QA L+DW+ + + + G Sbjct: 654 PVLVVVNHLKSKGSAGPWTGDADTGDGQGASNESRVRQATALRDWVPTVQGDVEAVALVG 713 Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269 DFN + + + + + +D+ ++++ A Sbjct: 714 DFNAYTREDP-----LQVLYDAGYVDAVETLAPGQ-WSYSFSGLSGSLDHVLLNEAARAR 767 Query: 270 LIQESFSEILYNEDDIKSRG--------------KRLSDHCPISIDYD 303 EI E R SDH P+ + Sbjct: 768 ATGADVWEINAEESVALEYSRYNYHGSLFHADDPYRSSDHDPVLVGLS 815 >gi|150009698|ref|YP_001304441.1| hypothetical protein BDI_3113 [Parabacteroides distasonis ATCC 8503] gi|255013007|ref|ZP_05285133.1| hypothetical protein B2_03823 [Bacteroides sp. 2_1_7] gi|149938122|gb|ABR44819.1| conserved hypothetical protein with endonuclease/exonuclease/phosphatase family domain [Parabacteroides distasonis ATCC 8503] Length = 304 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 38/325 (11%), Positives = 83/325 (25%), Gaps = 46/325 (14%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K + + +F L A A+ + + ++N+ + + + Y + Q Sbjct: 1 MKKLIYSFLFVLCSVFALQAESMVVATYNLRNANAGDSTNGNG-----WGQRYPYIAQLV 55 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + DI QE + + + S T K Sbjct: 56 QFHGFDIFGTQEGKYHQLQDLKNAMPGYDYIGVGRDDGKQAGEYSAIFYRTG-----KFE 110 Query: 122 RVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + + L D + R L +L Sbjct: 111 VLDHGDFWLSTITDRPNKGWDAVLPRICTWGKFRDKQTGFTFLFFNLHM----------D 160 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----NDDFWKTIDPNDS 233 ++ A+ + + + +P ++ GDFN + N + Sbjct: 161 HIGVQARAESAKLILKKLKEF-PEKLPAILTGDFNVDQHNESYLLLDNSGIMRDSYQIAD 219 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR----- 288 P + +A + + ID+ + + D K+ Sbjct: 220 FRYVPNGTFNAFHA--DRKTDSRIDHLFLTKEFDVKKYGVLTDTYRSEAKDAKNEQNANF 277 Query: 289 ----------GKRLSDHCPISIDYD 303 + SDH P+ I + Sbjct: 278 PKEVSMQKHVARVPSDHFPVMIVVE 302 >gi|32381240|gb|AAP80580.1| DNA nuclease [Streptococcus suis] Length = 1041 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 42/328 (12%), Positives = 83/328 (25%), Gaps = 61/328 (18%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQEMGS 76 K+ + S+NI S S + + + + + D++ L E+ Sbjct: 626 PNDDKLTIASYNIENFSAN--------SKSTSDAKVQRIAKSFVSDLHSPDVIGLIEVQD 677 Query: 77 YNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N + T+ + N +I Sbjct: 678 NNGATNDGTTDASKSAERLIAAIQAAGGPTY-TYVDIAPENNKDGGQEGGNIRVGFLYNS 736 Query: 119 KNVRVLQQSY-----------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 K V + + + + A R+ + G+K+ VL Sbjct: 737 KRVSLSDKPIGTATQAVAWENGELNLSLGRIDPTNPAWAAVRKTLAAEFVFKGEKVVVLA 796 Query: 162 IHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215 HL S + L S AQ + D+ + V+ GDFN Sbjct: 797 NHLNSKRGDNGLYGKIQPVSFKSEEKRHILAQTIADFTKAGLAQNPNANIVMLGDFNDYE 856 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 ++ + S + N +D ++ N + + Sbjct: 857 FTKTIE-----ILEAGGMANLVSRHDASDRFSYFYNGNNQSLDNMLVSTNLLERYAFDMV 911 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ DH P+ + D Sbjct: 912 HVNSAFMEEHGRAF----DHDPLLVQLD 935 >gi|194291703|ref|YP_002007610.1| endonuclease/exonuclease/phosphatase [Cupriavidus taiwanensis LMG 19424] gi|193225607|emb|CAQ71553.1| putative Endonuclease/exonuclease/phosphatase [Cupriavidus taiwanensis LMG 19424] Length = 614 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 41/316 (12%), Positives = 88/316 (27%), Gaps = 44/316 (13%) Query: 21 AQKVRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQ-------YAKNLDADIVFLQ 72 A +R+ ++N+ + R D L + + LDAD++ L Sbjct: 302 ATALRVAAFNLQNYFNGDGQGGGLDAPGNRGAQDAAALARQQAKLVAALRGLDADVIGLM 361 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ + + + R+ + D A+ + + + P Sbjct: 362 EVQNNGYGPTGAIRQLAAMLGPDWRVADPGSAALGTD-----AIAVGLLFNARTALPAGR 416 Query: 133 AKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDS-LENTYSPSCS-----LL 184 ++ +R+ + G + V+ H KS +++ Sbjct: 417 VATTWVGERSRQPLAATFRAATGGAPVTVVVNHFKSKNCVEAAGAQADQRDGQGCWNPAR 476 Query: 185 SQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 Q A L W+ + ++ GD N + + + Sbjct: 477 VQAADNLARWLATAPTGVADAGVLVIGDLNSYAMEDPI-----RLLARRGYADLVARFAG 531 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------------- 289 + +D+ + D A ++ I +E S Sbjct: 532 PHAYSYVYAAQAGYLDHVLGDATAAAHVVAVQAWHINADEPAALSYAPAPGSRAAPAFYA 591 Query: 290 ---KRLSDHCPISIDY 302 R SDH P+ +D+ Sbjct: 592 PDPYRSSDHDPLVVDF 607 >gi|291303281|ref|YP_003514559.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] gi|290572501|gb|ADD45466.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] Length = 592 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 43/329 (13%), Positives = 94/329 (28%), Gaps = 62/329 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 T + K+ + ++N+ L ++ + + + + DI+ ++E+ Sbjct: 284 TTEAQGDKLAMATYNVENLDPKDDQAAFDRHGEYIAKNLA---------SPDILGIEEIQ 334 Query: 76 SYNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 N K ++ + S + N + +I T Sbjct: 335 DNNGADDDGTVAADETWKKLIEAIKAAGGPSYE-YQSIDPENNADGGEPGGNIRTGFLYN 393 Query: 118 KKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 + V+ + P A + +R+ V E NGKK++ + Sbjct: 394 PERVKPSGKDAGDATTPVEVSAEGLSVSPGRVAPADDAWKDSRKPVAAEFEFNGKKVFAV 453 Query: 161 DIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRK 214 H S D L + P S QA+ + ++ + + V+ GD N Sbjct: 454 VNHFASKGGDDPLMGRFQPPARSSEEQRHPQAELVNKFVKELQGAVPDANVVVLGDINDF 513 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 + K + + + + N +D ++ + + Sbjct: 514 EFS----ETVAKLTAGDALKGAYDLLDEKERYSYVFDGNSQVLDQILVSPKLAEAAELDV 569 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + SDH P + Sbjct: 570 VHVNSEFTD-------QASDHDPSVVKLT 591 >gi|329963050|ref|ZP_08300830.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] gi|328529091|gb|EGF56021.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] Length = 287 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 42/293 (14%), Positives = 78/293 (26%), Gaps = 37/293 (12%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 S + V ++S+NI + ++ + WK R + D DI+ QE+ Sbjct: 24 SAPEPVNVMSFNIRYDNPEDSLDNWKYRKDRA-------ANAIRFYDVDILGTQEVLHNQ 76 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + S + P + + Sbjct: 77 LEDLKQRLPEYGVIGVGREDGKEKGEYSALWYKKERFNLLDSGYFWLSETPEVAGSKGWD 136 Query: 139 RAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 A R A + + +GK+ + L+ HL SL+ + L D Sbjct: 137 GACERIASWAKLQDKASGKEFFALNTHL-----DHVGVVARREGISLILDRINALSD--- 188 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRFPKEKDSRCNANKNLR 252 +P ++ GDFN + + + + + Sbjct: 189 -----GLPVIVTGDFNSEPESDVIKHVTDPSNPEHLTDARQASPIVYGPAWSFHDFGKIP 243 Query: 253 NKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY + + Y LSDH PI + + Sbjct: 244 YDKRPLIDYVFVRNRL---------KVLRYGVLAETEENAFLSDHAPILVTVE 287 >gi|148703245|gb|EDL35192.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae), isoform CRA_a [Mus musculus] Length = 609 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 43/300 (14%), Positives = 97/300 (32%), Gaps = 23/300 (7%) Query: 16 CTASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 C++S + +R++ WNI L E ++ + L+ + DI+ LQ Sbjct: 314 CSSSHS-PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQ 372 Query: 73 EMGSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 E+ Y + + + + + + +N A+ + +++ + Sbjct: 373 EVDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLISSTNIR 432 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQ 189 L A + A L + +G++ + HLK+ + S Q Sbjct: 433 LTAMTLKTN-QVAIAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGCD 481 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L++ + + +P ++ GDFN + +++ N + + S Sbjct: 482 LLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSPDGQSEPPYTT 541 Query: 250 NLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +DY ++A + SDH + D+ F Sbjct: 542 WKIRTSGECRHTLDYIWYSRHALSVTSALDLLTEEQIGPNRLPSFHYPSDHLSLVCDFSF 601 >gi|86141714|ref|ZP_01060238.1| hypothetical protein MED217_01245 [Leeuwenhoekiella blandensis MED217] gi|85831277|gb|EAQ49733.1| hypothetical protein MED217_01245 [Leeuwenhoekiella blandensis MED217] Length = 279 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 92/308 (29%), Gaps = 43/308 (13%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M + +FF + AQ+V L+++NI +E +G W + L Sbjct: 1 MKSIFAFLSLFFCLNLL--SAQEVSLMTYNIRMATESDGADAW-------SKRKEYLTSQ 51 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 D++ +QE + + + + + N +AI Sbjct: 52 VLFYAPDVMGVQEALPEQ-------MDYLGKHLTGYKHVGVGREGKNKGEFSAIFYNADR 104 Query: 121 VRVLQQSYPLLGAKDS-----FSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSL 173 ++VL+ L + A R L + +G+K +V + H F Sbjct: 105 LKVLEDDTFWLSETPEKISTGWDAALPRICTYALFKDKKSGEKFYVFNTH-----FDHVG 159 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + +L+ + + L +P ++GD N + + + D + Sbjct: 160 IEARKNASALILAKIKELN-------PKNLPAFVSGDLNLEPDSAPIAVLKTELDDTYEL 212 Query: 234 LIRFPKEKDSRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 N K IDY + + + + Sbjct: 213 APNGAFGPKGTFNGFKFTEPVTRRIDYIF-------QVKSNTSKVLKHAILSDSKDLHYP 265 Query: 293 SDHCPISI 300 SDH P+ + Sbjct: 266 SDHLPVYV 273 >gi|269968311|ref|ZP_06182334.1| putative phospholipase C precursor [Vibrio alginolyticus 40B] gi|269827084|gb|EEZ81395.1| putative phospholipase C precursor [Vibrio alginolyticus 40B] Length = 442 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 46/294 (15%), Positives = 92/294 (31%), Gaps = 42/294 (14%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---YN 78 Q ++L+++NI L+ Y L+ Q+ K D++ LQE+ + Sbjct: 176 QNLKLMTYNIWALTAIASHIGD---------RYELIPQHVKGY--DVLALQEVFASGREA 224 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + ++ + + + + +D I R V Q +P D F+ Sbjct: 225 FLRELAKEYPYQTKMLDKE------GVNIHDGGVIIVSRYPIVNEAQYVFPDCSGTDCFA 278 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + G+ V H SF + E +Q + L + Sbjct: 279 DK---GVNYAEIIKGGQAYHVFATHTASFDTDTAREYRQRQ-----FKQIRALAQSLK-- 328 Query: 199 KESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL------ 251 S V +GDFN + + + + + +S + N Sbjct: 329 IPSSETVVYSGDFNVNKRKFPSDYQQMIANLSAIEPH--YSGYTESTFDPRINNFAGEAL 386 Query: 252 ---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +DY ++ ++ ++ + + LSDH P+S Sbjct: 387 SGGENVEYLDYVMVSSEYGVKSFNDNRVDVPRTTAESLWKHYNLSDHFPVSATI 440 >gi|213625354|gb|AAI70416.1| CCR4 carbon catabolite repression 4-like, nocturnin [Xenopus laevis] gi|213626931|gb|AAI70414.1| CCR4 carbon catabolite repression 4-like, nocturnin [Xenopus laevis] Length = 388 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 94/300 (31%), Gaps = 22/300 (7%) Query: 16 CTASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++ + R++ WNI L E ++ + + L+ + D++ LQ Sbjct: 92 SSSQQPRTFRVMQWNILAQALGEGKDNFIMCPMEALKWEERKYLILEEILMYQPDVLCLQ 151 Query: 73 EMGSY-NAVAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 E+ Y + + + + F + +N A+ + +++ + Sbjct: 152 EVDHYFDTFQPILSRLGYQCTFLAKPWSPCLDVEHNNGPDGCALFFLQDRFQLVNSAKIR 211 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 L A+ + A L G+++ HLK+ + Q Sbjct: 212 LSARTLKTN-QVAIAETLQCCETGRQLCFAVTHLKA----------RTGWERFRLAQGSD 260 Query: 191 LKDWITQKKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L D + + VP +I GDFN +++ N + ++ DS Sbjct: 261 LLDNLESITQGAIVPLIICGDFNADPTEEVYKRFASSSLNLNSAYKLLSEDGDSEPPYTT 320 Query: 250 NL-----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +DY Q+A + + SDH + D+ F Sbjct: 321 WKIRTTGESCHTLDYIWYSQHALRVNAALGLPTEEQIGPNRLPSFNYPSDHLSLVCDFSF 380 >gi|83311632|ref|YP_421896.1| exonuclease III [Magnetospirillum magneticum AMB-1] gi|82946473|dbj|BAE51337.1| Exonuclease III [Magnetospirillum magneticum AMB-1] Length = 440 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 80/304 (26%), Gaps = 72/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + + + D+V LQE+ + Sbjct: 185 LRIATWNVN----------------SVRARLGNVLDWLGSFAPDVVLLQEIKCQD----- 223 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ ++ ++ D +R Sbjct: 224 -----QDFPLLEIQAAGYHAAVHGQKSYNGVAILSRHPMSDVRTRLSGDDSDEQARY--- 275 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + ++L + + Y + L+ + Sbjct: 276 ------IEATIGGWRLASLYLPNGNPAPGDKFDYKLA------WMARLRTHAQALLAQGI 323 Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 PFV+ GDFN D W++I F Sbjct: 324 PFVLGGDFNICPTDDDVYDPPKWRDDALCRPDSRAAWRSIVNLGLTEAFRALHPGEKGRY 383 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+F++ A L D ++ SDH P+ Sbjct: 384 SFWDYQAGAWQRDEGLRIDHFLLSPQAADCLHACEI-------DKAPRGKEKASDHTPVW 436 Query: 300 IDYD 303 I+ + Sbjct: 437 IELE 440 >gi|104781211|ref|YP_607709.1| exonuclease III [Pseudomonas entomophila L48] gi|95110198|emb|CAK14905.1| exonuclease III [Pseudomonas entomophila L48] Length = 270 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 36/313 (11%), Positives = 81/313 (25%), Gaps = 76/313 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ + + +D+ R Sbjct: 41 ------QFPLKDVEALGYHVHYHGQKGHYGVALLSREKPLSLHKGFASDEEDA-----QR 89 Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + +G + V++ F + + L+ + + ++ Sbjct: 90 RFIWGTFADRDGTPVTVMN-----GYFPQGESRDHPTKFPAKQRFYSDLQALLEGQFQNG 144 Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241 P ++ GD N ++L ++ + + + F Sbjct: 145 QPVLVMGDMNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKGWGLVDSFRHLN 204 Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + Q L D + Sbjct: 205 PEVADRFSWFDYRSRGFEDEPKRGLRIDLIMASQGLLPRLKAAGV-------DYELRGME 257 Query: 291 RLSDHCPISIDYD 303 + SDH PI ++ Sbjct: 258 KPSDHAPIWLELS 270 >gi|57863772|ref|NP_001009928.1| nocturnin [Gallus gallus] gi|33323505|gb|AAQ07476.1|AF503351_1 nocturnin [Gallus gallus] Length = 419 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 47/300 (15%), Positives = 92/300 (30%), Gaps = 22/300 (7%) Query: 16 CTASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 TAS + +R++ WNI L E ++ + L+ + DI+ LQ Sbjct: 123 NTASNHRPIRVMQWNILAQALGEGKDNFVQCPMEALKWEERKCLILEEILAYKPDILCLQ 182 Query: 73 EMGSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 E+ Y + + + + + + +N A+ K+ ++ + Sbjct: 183 EVDHYFDTFEPLLSRLGYQCTFFPKPWSPCLDVEQNNGPDGCALFFLKERFELINSANIR 242 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 L A + A L G+ + HLK+ + S Q Sbjct: 243 LTAMKLKTN-QVAIAQTLKCSETGRLFCIAVTHLKA----------RTGWERFRSAQGCD 291 Query: 191 LKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L + + + +P +I GDFN + + +++ N + + S Sbjct: 292 LLQNLKSITQGAKIPLIICGDFNAEPTEEVYREFSNSSLNLNSAYKLLSPDGQSEPPYTT 351 Query: 250 NLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +DY Q+A + SDH + D+ F Sbjct: 352 WKIRPSGECRHTLDYIWYSQHALNVNSALGLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 411 >gi|5924316|gb|AAD56548.1| carbon catabolite repression 4 protein homolog [Homo sapiens] Length = 431 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 41/293 (13%), Positives = 91/293 (31%), Gaps = 22/293 (7%) Query: 23 KVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-N 78 +R++ WNI L E ++ + L+ + DI+ LQE+ Y + Sbjct: 142 PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHYFD 201 Query: 79 AVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + + + + +N A+ + +++ + L A Sbjct: 202 TFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLTAMTLK 261 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWLKDWIT 196 + A L + +G++ + HLK+ + S Q L++ Sbjct: 262 TN-QVAIAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGCDLLQNLQN 310 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--- 253 + + +P ++ GDFN + ++ N + + S Sbjct: 311 ITQGAKIPLIVCGDFNAEPTEEVYKHFASSNLNLNSAYKLLSADGQSEPPYTTWKIRTSG 370 Query: 254 --KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +DY ++A + SDH + D+ F Sbjct: 371 ECRHTLDYIWYSKHALNVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 423 >gi|270003873|gb|EFA00321.1| hypothetical protein TcasGA2_TC003159 [Tribolium castaneum] Length = 398 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 91/298 (30%), Gaps = 24/298 (8%) Query: 19 SVAQKVRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 S +R+ WNI L + + S + + DI+ LQE+ Sbjct: 103 SSPYSLRVFQWNILSQALGQMNDHFVKCPDEALEWNSRKFRIIEEIVEYCPDIICLQEVD 162 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 +N + + + + + +N AI R V+ +L Sbjct: 163 HFNFLKYILGTQGYTGVFYPKPDSPCVYISGNNGPDGCAIFYRTNKFDVINIESRILEIW 222 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 S A L ++ G+++ V HLK+ + +L ++Q + L + Sbjct: 223 RVQSNQVALLA-NLRIKETGQEVCVTTTHLKA--------RQGAFLSTLRNEQGKDLLQF 273 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGN----NDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 ++Q P VI GDFN + +D++ +R Sbjct: 274 VSQHCGP-RPVVICGDFNAEPIEPIYSTILSDEYLNLGSAYADCDSSSANSAAREPPYTT 332 Query: 251 LRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + IDY + + +D SDH + D+ Sbjct: 333 WKIRDEGEVCHTIDYIFYKKGCLEVEAVLELPTGEEIGEDRVPSFSYPSDHFSLVCDF 390 >gi|154493449|ref|ZP_02032769.1| hypothetical protein PARMER_02788 [Parabacteroides merdae ATCC 43184] gi|154086659|gb|EDN85704.1| hypothetical protein PARMER_02788 [Parabacteroides merdae ATCC 43184] Length = 292 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 83/287 (28%), Gaps = 34/287 (11%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ + ++N+ +E++GV+ W N +++ + D DI QE + + Sbjct: 35 ELNVATFNLRMDTEKDGVNAWPNRK-------EMVKGLIRFHDFDIFGTQEGF-KHMLDG 86 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 V + + + + S T+ P + K + N Sbjct: 87 VAELDGYAYIGAGRDDGEDAGEHSAIFYKTSRFDLLDKGNFWFSETPDVPGKGWDATCCN 146 Query: 143 RRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R +GK + + H + S + L I Q Sbjct: 147 RICSWGKFRDKESGKVFYFFNSHY-----DHQGKVARRESS-------KLLIARIKQIAG 194 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWK--TIDPNDSLIRFPKEKDSRCNANKNLRNKI-PI 257 + GDFN +D D + + N+ K + I Sbjct: 195 TDATVFATGDFNAVPTDEPMVTLASDGLLLDSYDLSEQPRYGTEGTYNSFKTDSEMMNRI 254 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 DY + + Y + G+ SDH P+ I F Sbjct: 255 DYIWVTKGT---------KVKKYAVLNDMQYGRFPSDHFPVMIQVTF 292 >gi|130079|sp|P11889|PHL2_BACCE RecName: Full=Sphingomyelinase C; Short=SMase; AltName: Full=Cereolysin B; AltName: Full=SMPLC; AltName: Full=Sphingomyelin phosphodiesterase; Flags: Precursor gi|580758|emb|CAA31214.1| presphingomyelinase (AA -27 to 306) [Bacillus cereus] Length = 333 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 101/314 (32%), Gaps = 37/314 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + +I GD N N +KT++ + Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 317 Query: 292 --LSDHCPISIDYD 303 SD P+ Sbjct: 318 NDYSDDYPVEATIS 331 >gi|313158737|gb|EFR58124.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 318 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 51/325 (15%), Positives = 100/325 (30%), Gaps = 50/325 (15%) Query: 1 MIRKYVLALVFFLVPCTASVAQK----------VRLVSWNINTLSEQEGVSLWKNSVKRT 50 M + ++L L L C +V+ R+++ N+ G+ + + +R Sbjct: 18 MKKSFMLCLAGCLAACVTAVSATAARPASGQPATRVMTCNVR----ITGLPEDETAGRRW 73 Query: 51 TSDYTLLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108 + + D++ +QE+ SYN + F + ++ + +++ Sbjct: 74 EDCRDACLKAIRMYRPDVICMQEVIYDSYNYFKEKF-SDYVAYGFAGPEMDPYTEGYHFI 132 Query: 109 DIHTAIAVRKKNVRVLQ-----QSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLD 161 + +K+ V PL S++ R + + +G + VLD Sbjct: 133 GKNVIFFSKKRYEFVSSGCYWLSETPLAAGSCSWNTMRARHCNWVRLRDRKSGAEFRVLD 192 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 IHL +Q + + Q + P +I GDFN I Sbjct: 193 IHLDHKSDD------------ARREQMKMIVGECAQYAD-GFPQIICGDFNSGIENAPVA 239 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSE 277 + P E + K + ID+ + N Sbjct: 240 CLRDAGWQEAYEAVHGPGEAGFTYHGFKGPDYRKKNARRIDFIFVRGNLQP--------- 290 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302 + K G SDH + D+ Sbjct: 291 VAAEILRDKVDGLYPSDHYFLMSDF 315 >gi|5545327|dbj|BAA82542.1| DNase [Actinobacillus actinomycetemcomitans] Length = 278 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 38/320 (11%), Positives = 94/320 (29%), Gaps = 73/320 (22%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++P + Q ++++S+NIN L + L + D++ LQ Sbjct: 1 MLPQHKAKEQNMKIMSFNINGL----------------RARPHQLEEIINKYQPDVLGLQ 44 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ +VFP + + + H +A+ K + + Sbjct: 45 EI---KVADEVFPYDL-------VDHLGYHVNHFGQKGHYGVALLSKQAPLSVRKGFPTD 94 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 +++ R + + +E ++ V++ F + + L+ Sbjct: 95 DEEAQKR-----IIMIDLETKFGQLTVIN-----GYFPQGESREHPTKFPAKQKFYADLQ 144 Query: 193 DWITQKKESLVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPN 231 ++ Q + P +I GD N ++L ++++ + Sbjct: 145 RYLEQDHNAQNPVIIMGDMNISPSNLDIGIGEENRKRWLRTGKCSFLPEEREWYQRLYAY 204 Query: 232 DSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNE 282 F + + + ID+ + ++ + Sbjct: 205 GLEDTFRHMNPTVNDKFSWFDYRSKGFDDNRGLRIDHILANKALVAHCVDTGI------- 257 Query: 283 DDIKSRGKRLSDHCPISIDY 302 + SDH PI ++ Sbjct: 258 ALDIRAMNKPSDHAPIWAEF 277 >gi|239995387|ref|ZP_04715911.1| extracellular ribonuclease/nuclease fusion protein [Alteromonas macleodii ATCC 27126] Length = 1097 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 37/316 (11%), Positives = 85/316 (26%), Gaps = 41/316 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTT--SDYTLLRQYAKNLDADIVFLQEMGSY-- 77 V++ S+N+ + + +DAD++ L E+ + Sbjct: 721 GDVKVASFNVLNYFNGPNFPTSRGADSEDEFARQQAKTVAAIVAMDADVLGLVEIENDGY 780 Query: 78 ---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 +A+A + + + ++I I + + + + Sbjct: 781 GSDSAIASLVNSVNAELGSDVYSYVALESLLGGDEIAVGIIYK---PATVTPQGAAVTSS 837 Query: 135 DSFSRAGNRRAVELLVEINGKK--IWVLDIHLKSFC------FLDSLENTYSPSCSLLSQ 186 ++ GNR+ + +N + H KS D+ + L Sbjct: 838 EAPFDYGNRQPLLQTFSVNSNSEAFTLAVNHFKSKGSCGSATGNDADLGDGQGCWNELRT 897 Query: 187 QAQW-LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 QA L + + ++ GD N ++ Sbjct: 898 QAALGLTALVQNSEGLSDRVIVMGDLNAYAKEDPIL-----ALEDAGYSNLVNLFHGESA 952 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG---------------- 289 + +D+ + +++ + I +E + Sbjct: 953 YSYSFGGEIGYLDHALSSSTLTEYVADATVWHINADEPRVFDYNVEYKSETQLSSYYGAD 1012 Query: 290 -KRLSDHCPISIDYDF 304 R SDH P+ + DF Sbjct: 1013 AYRSSDHDPVIVVLDF 1028 >gi|160884084|ref|ZP_02065087.1| hypothetical protein BACOVA_02060 [Bacteroides ovatus ATCC 8483] gi|156110426|gb|EDO12171.1| hypothetical protein BACOVA_02060 [Bacteroides ovatus ATCC 8483] Length = 611 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 80/304 (26%), Gaps = 63/304 (20%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K L + L +RL+++NI + + + + + Sbjct: 4 MKKIFLLIFVILFIFPVQAQHTLRLMTYNIKNANGMDDICS-----------FQRVANVI 52 Query: 62 KNLDADIVFLQEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N D+V +QE+ S + V + I + Sbjct: 53 NNASPDVVAIQEVDSMTRRSGQKYVLGEIAERTQMHACFAPAIE----FEGGKYGIGLLT 108 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K V + Q+ PL G R R + E HL Sbjct: 109 KQVPLRLQTIPLPG------REEARTLILAEFE----DYIYCCTHLSLTEGD-------- 150 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + +K I K+ P +AGD N + + F Sbjct: 151 -----RMKSLEIVKSLIASYKK---PLFLAGDMNAEPESDFIK----------ELQKDFQ 192 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + K IDY + + S + SDH PI Sbjct: 193 ILSNPEKHTYPAPDPKEAIDYIAVSKQNATGFAVISAKVVN---------ELMASDHRPI 243 Query: 299 SIDY 302 ++ Sbjct: 244 LVEL 247 >gi|189235069|ref|XP_974729.2| PREDICTED: similar to nocturnin CG31299-PE [Tribolium castaneum] Length = 397 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 91/298 (30%), Gaps = 24/298 (8%) Query: 19 SVAQKVRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 S +R+ WNI L + + S + + DI+ LQE+ Sbjct: 102 SSPYSLRVFQWNILSQALGQMNDHFVKCPDEALEWNSRKFRIIEEIVEYCPDIICLQEVD 161 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 +N + + + + + +N AI R V+ +L Sbjct: 162 HFNFLKYILGTQGYTGVFYPKPDSPCVYISGNNGPDGCAIFYRTNKFDVINIESRILEIW 221 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 S A L ++ G+++ V HLK+ + +L ++Q + L + Sbjct: 222 RVQSNQVALLA-NLRIKETGQEVCVTTTHLKA--------RQGAFLSTLRNEQGKDLLQF 272 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGN----NDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 ++Q P VI GDFN + +D++ +R Sbjct: 273 VSQHCGP-RPVVICGDFNAEPIEPIYSTILSDEYLNLGSAYADCDSSSANSAAREPPYTT 331 Query: 251 LRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + IDY + + +D SDH + D+ Sbjct: 332 WKIRDEGEVCHTIDYIFYKKGCLEVEAVLELPTGEEIGEDRVPSFSYPSDHFSLVCDF 389 >gi|332528588|ref|ZP_08404570.1| endonuclease/exonuclease/phosphatase [Hylemonella gracilis ATCC 19624] gi|332041904|gb|EGI78248.1| endonuclease/exonuclease/phosphatase [Hylemonella gracilis ATCC 19624] Length = 264 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 48/300 (16%), Positives = 87/300 (29%), Gaps = 64/300 (21%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P A +R+ ++NI+ R + L + LDADIV LQE+ Sbjct: 15 PMAGHQAATLRVATYNIH--------KGVLGLGPRRRLEIHNLSLAVEQLDADIVCLQEV 66 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN------NDIHTAIAVRKKNVRVLQQSY 128 N + + W + L A+ + + Sbjct: 67 RKLN-HREAAHFSRWPELPQADYLAPEGYEAIYRTNAYTRHGEHGNAMLSRWPVLSAGH- 124 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 S R R + +V ++G+ + VL +HL + +QA Sbjct: 125 ----EDMSDHRFEQRGLLHGVVSVHGQSVHVLVVHLGLI-------------RASRVRQA 167 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 L +I ++ + P ++AGDFN F + C Sbjct: 168 AQLDQYIRREIPTEAPLIVAGDFNDW---------------GERVHRHFERMGLQTCEPA 212 Query: 249 KNLRNKIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +DY + ++ R+SDH P+ ++ Sbjct: 213 AHPTFPARLPLVQLDYVYVRGLTPLRVVVP-----------RGRAWWRMSDHLPLIAEFT 261 >gi|332531041|ref|ZP_08406960.1| exodeoxyribonuclease III Xth [Hylemonella gracilis ATCC 19624] gi|332039522|gb|EGI75929.1| exodeoxyribonuclease III Xth [Hylemonella gracilis ATCC 19624] Length = 268 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 31/304 (10%), Positives = 88/304 (28%), Gaps = 64/304 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAK 82 ++L +WN+N+L R L A D++ LQE+ + Sbjct: 1 MKLATWNVNSLG------------VRLPQVLDWLAAQAAGGAPIDVLALQELKLTDD--- 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 ++ + + +A+ + + +A Sbjct: 46 -------KFPHAEFEAAGYRAEAYGQKTYNGVALISRLSLPALRDVTRNITGFEDEQAR- 97 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + ++ + +++ + + S + Y + L+ + + + Sbjct: 98 --VIVATLDTPQGPLRIVNGYFVNGQEPGSEKFAYK------MRWMDALRAQVQAELATH 149 Query: 203 VPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNA 247 V+ GD+N + + D +K + + + + + Sbjct: 150 ARLVLLGDYNITPDDRDSYDPEGLRETIHHTTQEREQFKALLALGLHDAY-RMFEQPEKS 208 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ++ ID+ ++ + + + D + + K+ SDH P+ Sbjct: 209 YSWWDYRMLGFQKNRGLRIDHILVSEALKPAVQGCTI-------DRLPRKNKQPSDHAPV 261 Query: 299 SIDY 302 ++ Sbjct: 262 LLEL 265 >gi|146282538|ref|YP_001172691.1| exonuclease III [Pseudomonas stutzeri A1501] gi|145570743|gb|ABP79849.1| exodeoxyribonuclease III [Pseudomonas stutzeri A1501] Length = 301 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 89/312 (28%), Gaps = 76/312 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L + D++ LQE + Sbjct: 32 MKIVSFNINGL----------------RARPHQLSAIIEKHQPDVIGLQE---TKVADEQ 72 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-VRVLQQSYPLLGAKDSFSRAGN 142 FP+ + + + H +A+ + + + +P G + Sbjct: 73 FPQ-------AEIEALGYHVHYHGQKGHYGVALLSRQAPLEVHKGFPSDGEESQKRFIWG 125 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R A + NG+ + V++ F + ++ L+ + Q+ Sbjct: 126 RFA-----DANGQPVTVMN-----GYFPQGESRAHPVKFPAKTKFYADLQALLEQRFSPD 175 Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241 + GDFN ++L ++ + I F Sbjct: 176 ESLALMGDFNISPQDCDIGIGEVNAKRWLRTGKCSFLPEEREWLERIKGWGLQDSFRTLN 235 Query: 242 DSRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + IDY + ++ + D + Sbjct: 236 PEVVDRFSWFDYRSRGFEDEPRRGLRIDYILTTHALHERVTDCGV-------DYDIRAME 288 Query: 291 RLSDHCPISIDY 302 + SDHCP+ I+ Sbjct: 289 KPSDHCPVWIEL 300 >gi|323494918|ref|ZP_08100010.1| putative phospholipase C [Vibrio brasiliensis LMG 20546] gi|323310882|gb|EGA64054.1| putative phospholipase C [Vibrio brasiliensis LMG 20546] Length = 441 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 42/300 (14%), Positives = 94/300 (31%), Gaps = 40/300 (13%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 S ++++++NI L+ Y L+ +Y K D++ LQE+ Sbjct: 170 SLESDPNTLKMMTYNIWALTA---------IASHIEDRYQLIPEYVKGY--DVLALQEVF 218 Query: 76 S---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + + + ++ + + + + +D I R V Q +P Sbjct: 219 ASGRDSFLRELAKEYPYQTKMLDKD------GFNIHDGGVMIVSRYPIVNQAQYVFPDCT 272 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 D F+ + GK + H S+ + + +Q + L Sbjct: 273 GTDCFADK---GVNYAEIIKGGKAYHIFATHTASYDTDTARDYRQRQ-----FKQMRQLA 324 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL- 251 ++ V +GDFN D + + + +S + N Sbjct: 325 --LSLNISQNETVVYSGDFNVN-KRKFPGDYQQMITNLSAIEPDYSGYTESTFDPRINDF 381 Query: 252 --------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 N +DY ++ ++ ++ + + + LSDH P++ + Sbjct: 382 AGEAMSGGENVEYLDYVMVSNEYQIKSSNDNRVDVPRSTGERLWKHYNLSDHFPVTAVIE 441 >gi|296863686|pdb|3MPR|A Chain A, Crystal Structure Of EndonucleaseEXONUCLEASEPHOSPHATASE FA Protein From Bacteroides Thetaiotaomicron, Northeast Struct Genomics Consortium Target Btr318a gi|296863687|pdb|3MPR|B Chain B, Crystal Structure Of EndonucleaseEXONUCLEASEPHOSPHATASE FA Protein From Bacteroides Thetaiotaomicron, Northeast Struct Genomics Consortium Target Btr318a gi|296863688|pdb|3MPR|C Chain C, Crystal Structure Of EndonucleaseEXONUCLEASEPHOSPHATASE FA Protein From Bacteroides Thetaiotaomicron, Northeast Struct Genomics Consortium Target Btr318a gi|296863689|pdb|3MPR|D Chain D, Crystal Structure Of EndonucleaseEXONUCLEASEPHOSPHATASE FA Protein From Bacteroides Thetaiotaomicron, Northeast Struct Genomics Consortium Target Btr318a Length = 298 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 34/302 (11%), Positives = 75/302 (24%), Gaps = 32/302 (10%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + + S+N+ + + Y ++ Q + D DI QE + Sbjct: 3 QPTSLTVASYNLRNANGSDSARGDG-----WGQRYPVIAQXVQYHDFDIFGTQECFLHQL 57 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + S T + P + +K + Sbjct: 58 KDXKEALPGYDYIGVGRDDGKDKGEHSAIFYRTDKFDIVEKGDFWLSETPDVPSK-GWDA 116 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + L +L + S L+ ++ + L Sbjct: 117 VLPRICSWGHFKCKDTGFEFLFFNLH---XDHIGKKARVESAFLVQEKXKELGR------ 167 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWK-TIDPNDSLIRFPKEKDSRCNANKNLRNK-IPI 257 +P ++ GDFN + + K + + + + N I Sbjct: 168 GKNLPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKCDYRYALNGTFNNFDPNSFTESRI 227 Query: 258 DYFVMDQNAYKFL---------------IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D+ + + + +E + + SDH P+ ++ Sbjct: 228 DHIFVSPSFHVKRYGVLTDTYRSVRENSKKEDVRDCPEEITIKAYEARTPSDHFPVKVEL 287 Query: 303 DF 304 F Sbjct: 288 VF 289 >gi|189464427|ref|ZP_03013212.1| hypothetical protein BACINT_00769 [Bacteroides intestinalis DSM 17393] gi|189438217|gb|EDV07202.1| hypothetical protein BACINT_00769 [Bacteroides intestinalis DSM 17393] Length = 277 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 79/306 (25%), Gaps = 43/306 (14%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 L L Q + ++++NI + + + WK + + Sbjct: 4 LILFGSCKDQPTQNEQPLEVMTFNIRLDAPSDSANNWKYRK-------DNVCKMIAYYQP 56 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D++ +QE+ + + T ++ Sbjct: 57 DLLGMQEVCHNQMEDLKLGLPQYTALGVGRDDGKEAGEYCPVFFKTDRFTLVEHGNFSLS 116 Query: 127 SYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 P + + NR ++ + +GKK+ + HL + + L+ Sbjct: 117 EQPETIGVRGWDASYNRITTWAILQKKSDGKKLVFFNTHL-----DNDGKTARKEGVQLI 171 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + + +P +I GDFN +T++ Sbjct: 172 LNKIKE--------TAPHMPAIITGDFNCTPGEAP-----LQTLEKGGMKNTSKVATVMY 218 Query: 245 CNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ++ +DY + Y LSDH P Sbjct: 219 GPSWSFHDFGRLPMEKRVLLDYVFVTNGT---------KTDRYRVIQDTPENGFLSDHNP 269 Query: 298 ISIDYD 303 + ++ Sbjct: 270 VLVNIT 275 >gi|149187906|ref|ZP_01866202.1| putative phospholipase C precursor [Vibrio shilonii AK1] gi|148838302|gb|EDL55243.1| putative phospholipase C precursor [Vibrio shilonii AK1] Length = 442 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 90/291 (30%), Gaps = 36/291 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 Q ++L+++NI L Y L+ +Y K D++ LQE+ + A Sbjct: 176 QNLKLMTYNIWALPAIASHIGD---------RYELIPEYVKGY--DVLALQEVFASGRDA 224 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + I I R V Q +P D F+ Sbjct: 225 FLRELAKEYPYQTKMLDKEGINIYDGGVI---IVSRYPIVNEAQYVFPDCSGTDCFADK- 280 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 V G+ V H SF + + +Q + L + + Sbjct: 281 --GVNYAEVIKGGQAYHVFATHTASFDTDTARDYRQRQ-----FKQIRALAQSLD--IPA 331 Query: 202 LVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--------- 251 + +GDFN + + + ++ ++ + S + N Sbjct: 332 NEAVIYSGDFNVNKLKFPDDYQQMMTNLNVSEPQ--YSGYTASTFDPRINDFAGGALSGG 389 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +DY ++ ++ ++ D+ + LSDH P++ Sbjct: 390 ANVEYLDYVMVSNEYGTKSYNDNRVDVPRTTDESLWKHYNLSDHFPVTAVI 440 >gi|26989609|ref|NP_745034.1| exonuclease III [Pseudomonas putida KT2440] gi|24984490|gb|AAN68498.1|AE016481_14 exodeoxyribonuclease III [Pseudomonas putida KT2440] Length = 270 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 35/313 (11%), Positives = 82/313 (26%), Gaps = 76/313 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V +NIN L + L + D++ LQE + Sbjct: 1 MKIVCFNINGL----------------RARPHQLAALIEKHQPDVIGLQETKVSDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + H +A+ + + +D+ R Sbjct: 41 ------QFPLADVQALGYHVHYHGQKGHYGVALLSRQPPLSLHKGFATDEEDA-----QR 89 Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + NG I +++ F + + L+ + + + Sbjct: 90 RFIWGTFADANGSPITIMN-----GYFPQGESRDHPTKFPAKQRFYSDLQALLESQFRND 144 Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241 P ++ GD N ++L ++ + + + F Sbjct: 145 QPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSFLPEEREWMERLKGWGLVDSFRHLY 204 Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + Q + D + Sbjct: 205 PDVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQQLVPRIKAAGV-------DYELRGME 257 Query: 291 RLSDHCPISIDYD 303 + SDH PI ++ Sbjct: 258 KPSDHAPIWLELS 270 >gi|260220365|emb|CBA27833.1| hypothetical protein Csp_A04240 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 284 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 47/293 (16%), Positives = 89/293 (30%), Gaps = 54/293 (18%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + + +R+V++NI+ + + L + +DAD++ LQE+ Sbjct: 30 PSGGARMKTLRVVTYNIH--------KGVQGLGPLRRLEIHNLSHAMELMDADVLCLQEV 81 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN------DIHTAIAVRKKNVRVLQQSY 128 + + W + L A+ K V Q Sbjct: 82 RKLHQ-REARHFPHWPQAPQADYLAPSGYEAIYRTNAITRHGEHGNALLSKWPVVQHQH- 139 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 S R R + + +++ G+ + VL +HL +Q Sbjct: 140 ----EDMSDHRLEQRGLLHVELDVAGQSLHVLVVHLGLIRAG-------------RGRQL 182 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 Q L +I ++ P ++AGDFN + + P K C Sbjct: 183 QQLTQFIQREIPPDAPLLVAGDFNDLPA------WVARQLAPAGLKAPVTK----PCVTF 232 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + + +D+ + L S R+SDH P+ + Sbjct: 233 PSRLPLVQLDHVLARG-----LTPVSA------TAPRGMSWARMSDHLPLITE 274 >gi|257141810|ref|ZP_05590072.1| extracellular nuclease, putative [Burkholderia thailandensis E264] Length = 613 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 93/315 (29%), Gaps = 47/315 (14%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ N + + + R + K LDAD++ L E+ Sbjct: 283 LRVASFNVLNYFNGDGTGGGFDDPNNRGAKSDEEFARQDAKIVSALKALDADVIGLMEIE 342 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + S + S R + I A+ + V+ P+ A Sbjct: 343 NDGYGPLSAVRQLAAKLGDSWRVVDPGSARLGGDAIAVALIYDSRKVK------PVGNAA 396 Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186 NR+ + + + + V HLKS ++ + + S+ Sbjct: 397 TLAIDDKNRQPIAQTFQPFGGSRAVTVAVNHLKSKNCPNATGDDLDQGDGQGCWNATRSR 456 Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A + DW+ + ++ GD N +T++ + + + Sbjct: 457 AAAKVADWLARNPTGAHSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKIGAP 511 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287 + +D+ + + I +E Sbjct: 512 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKTAEQQRTYYAP 571 Query: 288 RGKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 572 DAYRSSDHDPVLIDI 586 >gi|167577079|ref|ZP_02369953.1| extracellular nuclease, putative [Burkholderia thailandensis TXDOH] Length = 613 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 93/315 (29%), Gaps = 47/315 (14%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ N + + + R + K LDAD++ L E+ Sbjct: 283 LRVASFNVLNYFNGDGTGGGFDDPNNRGAKSDEEFARQDAKIVSALKALDADVIGLMEIE 342 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + S + S R + I A+ + V+ P+ A Sbjct: 343 NDGYGPLSAVRQLAAKLGDSWRVVDPGSARLGGDAIAVALIYDSRKVK------PVGNAA 396 Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186 NR+ + + + + V HLKS ++ + + S+ Sbjct: 397 TLAIDDKNRQPIAQTFQPFGGSRAVTVAVNHLKSKNCPNATGDDLDQGDGQGCWNATRSR 456 Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A + DW+ + ++ GD N +T++ + + + Sbjct: 457 AAAKVADWLARNPTGAHSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKIGAP 511 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287 + +D+ + + I +E Sbjct: 512 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKTAEQQRTYYAP 571 Query: 288 RGKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 572 DAYRSSDHDPVLIDI 586 >gi|83718276|ref|YP_438732.1| extracellular nuclease [Burkholderia thailandensis E264] gi|83652101|gb|ABC36165.1| extracellular nuclease, putative [Burkholderia thailandensis E264] Length = 622 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 93/315 (29%), Gaps = 47/315 (14%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ N + + + R + K LDAD++ L E+ Sbjct: 292 LRVASFNVLNYFNGDGTGGGFDDPNNRGAKSDEEFARQDAKIVSALKALDADVIGLMEIE 351 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + S + S R + I A+ + V+ P+ A Sbjct: 352 NDGYGPLSAVRQLAAKLGDSWRVVDPGSARLGGDAIAVALIYDSRKVK------PVGNAA 405 Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186 NR+ + + + + V HLKS ++ + + S+ Sbjct: 406 TLAIDDKNRQPIAQTFQPFGGSRAVTVAVNHLKSKNCPNATGDDLDQGDGQGCWNATRSR 465 Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A + DW+ + ++ GD N +T++ + + + Sbjct: 466 AAAKVADWLARNPTGAHSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKIGAP 520 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287 + +D+ + + I +E Sbjct: 521 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKTAEQQRTYYAP 580 Query: 288 RGKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 581 DAYRSSDHDPVLIDI 595 >gi|197119100|ref|YP_002139527.1| metal-dependent hydrolase [Geobacter bemidjiensis Bem] gi|197088460|gb|ACH39731.1| metal-dependent hydrolase [Geobacter bemidjiensis Bem] Length = 246 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 88/285 (30%), Gaps = 44/285 (15%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++ ++++N+++ + + + + DIV LQE+ + Sbjct: 2 SRTFSVMTYNVHSCIGTDRQLSP-----------LRIAEVIDRCNPDIVALQELDAGLPR 50 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++ + HS + A+ ++ L ++ + Sbjct: 51 TEMIDQAHLIAMTLEMSFHFHSSIHLKEGGY-GNAILSRSPVQLIKAGAVPTDP-LHPSF 108 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQK 198 R A+ VE++G KI VL H +QA+ + +W+ Sbjct: 109 ERRGALWAEVELHGVKIQVLATHFGLNRG-------------ERVRQARAVTGPEWL-GH 154 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 E L P V+ GDFN ++ + ++ + + ID Sbjct: 155 PECLPPAVLCGDFNALFGSS-----VYRLLTRQLHDVQRKVKGRLPRGTWPAQLPFMRID 209 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + N + + + SDH P+ + + Sbjct: 210 HLFVTHNLKVRSVSVPRNPLTRV----------ASDHLPLVVTLE 244 >gi|255533667|ref|YP_003094039.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] gi|255346651|gb|ACU05977.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] Length = 269 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 43/316 (13%), Positives = 92/316 (29%), Gaps = 64/316 (20%) Query: 2 IRKYVLALVFFLV-------------PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK 48 + + L+ + P + + +R++S+NI+ + L Sbjct: 1 MNRITFFLIALFLQLNLRPEGYAQTKPADKNAGKTLRIMSYNIHHANPPSKPDL------ 54 Query: 49 RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS-N 107 D + + ADIV LQE+ + V++ N I H + Sbjct: 55 ---IDLDAIARVITASKADIVALQEVET--GVSRSGGANEAKILAEKTGFQYHFFKAIDY 109 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 + IA+ + + PL A R +++ +KI + HL Sbjct: 110 DGGDYGIAILSRYPLKEIRLVPLP----QQITAEKRILGYATIKVGKQKIIFANTHL--- 162 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 + + ++ + + + + +P ++ GD N + Sbjct: 163 -----------DASRTDENRLVQMQSILKEFEHAALPVILCGDLNSVAGSSVIS------ 205 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + R E + N + IDY + + + Sbjct: 206 -LLDAQFKRTCTENCPPTSPQINP--RRTIDYI------------ATKNVTWPLLEYQVI 250 Query: 288 RGKRLSDHCPISIDYD 303 SDH P+ ++ Sbjct: 251 AETYASDHRPVMAIFN 266 >gi|311696709|gb|ADP99582.1| extracellular nuclease [marine bacterium HP15] Length = 586 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 86/323 (26%), Gaps = 34/323 (10%) Query: 11 FFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWK------NSVKRTTSDYTLLRQ 59 F + VR+++ N+ +G + L Sbjct: 265 FLATNPRETAPGPRHEASVRIMALNLGNFFNGDGRGGEFPTSRGAGTPAEFRRQQQQLVN 324 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 D DI+ L E+ + T R ++ +D +++I T + R Sbjct: 325 TLLAPDPDILALTELENDGYGPASSIAELAEALGGTWRFVSTPGQDGDDEIRTGLLYRSD 384 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTY 177 + + L +G R + + V+ HLKS + + Sbjct: 385 RISAVGSPERLAKGPFE---SGGRPPLAQDFGRTDGDATVRVIVPHLKSKSCRGARGDNQ 441 Query: 178 SPS------CSLLSQQAQWLKDWITQKKESLVPF--VIAGDFNRKINYLGNNDDFWKTID 229 + S + +A+ L W +I GD N Sbjct: 442 DQADGQGCYASRRTNEAKTLAAWSGSDTRRHYSVGTLIIGDLNSYAREHPIAVLEQAGFT 501 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 EK + K +D+ + + ++ + +E + Sbjct: 502 SMVHHFYPCTEKTCGHYTYRYRGQKGSLDFALASETLKPRVMGAWSWLVNADEPRVLDYR 561 Query: 290 ----------KRLSDHCPISIDY 302 R SDH P+ +D Sbjct: 562 SDHPASGRGPWRSSDHNPVIVDL 584 >gi|261821541|ref|YP_003259647.1| exonuclease III [Pectobacterium wasabiae WPP163] gi|261605554|gb|ACX88040.1| exodeoxyribonuclease III [Pectobacterium wasabiae WPP163] Length = 272 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 37/313 (11%), Positives = 83/313 (26%), Gaps = 73/313 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +++VS+NIN L + L + D++ LQE ++ + Sbjct: 2 AANMKVVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQETKVHDDM 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + + + H +A+ K + + D+ Sbjct: 46 FPLEDVSQY----------GYHVYYHGQKGHYGVALLCKEQPIAVRRGFPTDEDDA---- 91 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + + V++ F + ++ Q L+ ++ Q Sbjct: 92 -QRRIIMADFATEHGTLTVVN-----GYFPQGESRDHPVKFPAKTRFYQDLQTYLEQHHS 145 Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239 + P ++ GD N L ++ + + F Sbjct: 146 ATQPLIVMGDVNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMARLQGWGLIDTFRA 205 Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + + + D + Sbjct: 206 ANPESNDRFSWFDYRSAGFDDNRGLRIDLILASTFLAERCVATGI-------DYDIRGME 258 Query: 291 RLSDHCPISIDYD 303 + SDH PI ++ Sbjct: 259 KPSDHAPIWAEFT 271 >gi|162448958|ref|YP_001611325.1| endonuclease/exonuclease/phosphatase family protein [Sorangium cellulosum 'So ce 56'] gi|161159540|emb|CAN90845.1| endonuclease/exonuclease/phosphatase family [Sorangium cellulosum 'So ce 56'] Length = 1174 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 43/334 (12%), Positives = 84/334 (25%), Gaps = 70/334 (20%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVF 70 + A + + ++N+ L + + L + D+V Sbjct: 643 VTSLGPRTADDLDVAAFNVENLDPGDP-----------QEKFDRLARILVENLGSPDLVA 691 Query: 71 LQEMGSYN-------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 L+E+ + A+A V + F S + + +I Sbjct: 692 LEEVQDNSGPTNNGVVDASTTFARLIAAIAAVPGGPSTYQFRSIDPTDGTDGGEPGGNIR 751 Query: 112 TAIAVRKKNVR----------------------VLQQSYPLLGAKDSFSRAGNRRAVELL 149 R V + P + + A +R+ + Sbjct: 752 VGFLFRTDRGLEFVDRPGAGALTPNEVLGGAGGVSLRYSPGRIDPGNPAFASSRKPLAGE 811 Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKESLVP- 204 NG+ ++V+ H S + L + P S QQA + ++ Q +S Sbjct: 812 FRWNGQPLFVVANHWNSKGGDEPLYGRFQPPTLSSEVQRRQQATVVAGFVRQILDSDPAA 871 Query: 205 -FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 V+ GD N + N +D+ ++ Sbjct: 872 NVVVLGDLNDFQFSAP-----LGILKDAGLTTLIETLPPEERYTYVFDGNGQSLDHVLVS 926 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N + SDH P Sbjct: 927 ANL-----AGPKLVGFDVVHVNAEFADQASDHDP 955 >gi|228937917|ref|ZP_04100544.1| Sphingomyelinase C [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228962244|ref|ZP_04123677.1| Sphingomyelinase C [Bacillus thuringiensis serovar pakistani str. T13001] gi|228970798|ref|ZP_04131438.1| Sphingomyelinase C [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977373|ref|ZP_04137768.1| Sphingomyelinase C [Bacillus thuringiensis Bt407] gi|228782350|gb|EEM30533.1| Sphingomyelinase C [Bacillus thuringiensis Bt407] gi|228788923|gb|EEM36862.1| Sphingomyelinase C [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228797413|gb|EEM44593.1| Sphingomyelinase C [Bacillus thuringiensis serovar pakistani str. T13001] gi|228821708|gb|EEM67709.1| Sphingomyelinase C [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938397|gb|AEA14293.1| sphingomyelin phosphodiesterase [Bacillus thuringiensis serovar chinensis CT-43] Length = 348 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 101/307 (32%), Gaps = 37/307 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + +I GD N N +KT++ + Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 317 Query: 292 --LSDHC 296 SDHC Sbjct: 318 NDYSDHC 324 >gi|87119222|ref|ZP_01075120.1| hypothetical protein MED121_13170 [Marinomonas sp. MED121] gi|86165613|gb|EAQ66880.1| hypothetical protein MED121_13170 [Marinomonas sp. MED121] Length = 449 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 88/288 (30%), Gaps = 27/288 (9%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + ++ ++++N L L + K T+ + +Y + D+V QE+ Sbjct: 176 SNELNVLTYNTWAL-------LPPLASKNTSDRLDTIAEYMTHY--DVVVFQEVFDP--- 223 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + T + + + + Q + A Sbjct: 224 --ILTAKFRAKVAQTYPYMTQIPWQVGKILTGGSFIASRWPI-EAQDAVVYDACRGDGCL 280 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT-QKK 199 + + + H + ++ +Q LK +I ++ Sbjct: 281 AAKGMNYAKIRKGSNVFHIFGTHTHA--------YASEQDITVRFEQLAQLKRFIESKQI 332 Query: 200 ESLVPFVIAGDFN-RKINYLGNNDDFWKTIDPNDS--LIRFPKEKDSRCNANKNLRNKIP 256 P ++AGDFN KINY + DF ++ + +P N + Sbjct: 333 PYQEPVIMAGDFNVDKINYPQEHLDFLALLNATEPEATGAYPYSYAGPVNIYADEAFNEY 392 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +DY + + E+ + D + LSDH P+ + F Sbjct: 393 LDYVLYSNDHIAPYASENKMLTPRSIDSQHWQSWDLSDHYPVEGRFAF 440 >gi|167583843|ref|ZP_02376231.1| Endonuclease/exonuclease/phosphatase [Burkholderia ubonensis Bu] Length = 604 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 43/316 (13%), Positives = 88/316 (27%), Gaps = 47/316 (14%) Query: 23 KVRLVSWNI-NTLSEQEGVSLWKNSVKR---TTSDYTL----LRQYAKNLDADIVFLQEM 74 VR+ S+N+ N + + R T +D+ + + L AD++ L E+ Sbjct: 263 DVRIASFNVFNYFNGDGRGGGFDAPANRGAKTPADFARQEAKIVATLRALRADVIGLMEI 322 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + R++ R + I A+ + V P A Sbjct: 323 ANNGYGDASAVRRLAAQLGDGWRVVEPGAARLGGDAIAVALLYDSRTVE------PAGRA 376 Query: 134 KDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSC------SLLS 185 + NR + + + V HLKS ++ + + + Sbjct: 377 ATLAIGSLNRPPLAQTFTRIGGTRAVTVAVNHLKSKNCPNAAGADLDQADGQGCWNATRT 436 Query: 186 QQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + A+ + W+ + ++ GD N + ++ + Sbjct: 437 RAAERIAGWLAGNPTGATAEGVLLIGDLNSYAKEDPI-----RALEARGYANLVARFHGD 491 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------- 289 + +D+ + + I +E Sbjct: 492 DAYSYVFGGEAGYLDHALATSTLAARVKAVHAWHINADEPVALQYTPGYKTREQQARYYA 551 Query: 290 ---KRLSDHCPISIDY 302 R SDH PI ID Sbjct: 552 PDPYRSSDHDPIVIDL 567 >gi|330875089|gb|EGH09238.1| exonuclease III [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 270 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 80/312 (25%), Gaps = 74/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ +N + G + + R Sbjct: 41 ------QFPLADVEALGYHVHFHGQKGHYGVALLSRNPPLALHK----GFEGDDEESQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + NG+ + +++ F + + + L+ + + Sbjct: 91 FIRGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQALLEGHFSNDQ 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 P ++ GD N ++L ++ + + + F Sbjct: 146 PLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRYLYP 205 Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + + D ++ Sbjct: 206 EVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKAAGV-------DYDLRGMEK 258 Query: 292 LSDHCPISIDYD 303 SDH PI ++ Sbjct: 259 PSDHAPIWLELS 270 >gi|17227772|ref|NP_484320.1| hypothetical protein alr0276 [Nostoc sp. PCC 7120] gi|17135254|dbj|BAB77800.1| alr0276 [Nostoc sp. PCC 7120] Length = 2348 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 47/331 (14%), Positives = 96/331 (29%), Gaps = 51/331 (15%) Query: 15 PCTASVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDA 66 T V +++ S+N+ N + S + + +R + L+A Sbjct: 1733 ATTPDVGGTLKVASFNVLNYFNGDGTGSGFTSPEQRGAENLTEFNRQREKTIAAILGLNA 1792 Query: 67 DIVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKN 120 D+V L E+ + +A+ + T IN D I + + Sbjct: 1793 DVVGLIEIENDGYGANSAIQDLINGLNAVAGAGTYAFINPGLSQLGTDAIAVGFIYKPNS 1852 Query: 121 VR-VLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKS-----FCFLDS 172 V V + G NR+ + N G++ + H KS D+ Sbjct: 1853 VTPVGVAATVADGFGQGAFDNNNRKPLAQTFRQNSTGEQFTAVINHFKSKGSSSGNPGDA 1912 Query: 173 LENTYS-PSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTID 229 S ++ +Q L W+ + ++I GD N + ++ Sbjct: 1913 DAGDGQGLSNGTRTRASQDLAAWLATNPTGTTDTDYLILGDLNAYAQEDPI-----RALE 1967 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 P + +D+ + + + + I +E ++ Sbjct: 1968 NAGYNNLLPN----TTYSYVFDGQWGALDHALANASLASQVSTAVKWHINADEPNVLDYN 2023 Query: 290 -----------------KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 2024 TNFKSVGQQTSLYSPDAFRSSDHDPVIVGLN 2054 >gi|270339913|ref|ZP_06006433.2| conserved hypothetical protein [Prevotella bergensis DSM 17361] gi|270333322|gb|EFA44108.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] Length = 262 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 89/311 (28%), Gaps = 71/311 (22%) Query: 1 MIRKYVLALVFFLVPCTASVAQ-----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55 M K L L+F L A+ AQ +R++++N+ + Sbjct: 1 MKNKITLILLFLLCVAHATTAQKKDTITLRVMTYNLRFG---------------ELASLE 45 Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN----HSKRDSNNDIH 111 + + ++ D+V LQE+ + +N + + K + Sbjct: 46 DIAAHIRSFKPDLVALQEVDCKTYRERAPKQNGRDFISTLAYHTGMLGLYGKTIEYRKGY 105 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 I + + + + L + R + +EI+G + HL F Sbjct: 106 YGIGLLTRFPYIDMEKVMLPNPL----QKEPRALLRANLEIDGDTVIFAVTHLDVF---- 157 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF---WKTI 228 S + + QA+++ + + P +I GDFN W + Sbjct: 158 --------SEANRTTQAKYINQYFARCP---YPVIIGGDFNAAPTEECIKQTMKASWANL 206 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 ++ I IDY ++ Sbjct: 207 TNDEL-------------TFHTSNPTIKIDYLFGRPMNGWTVVDTQTIHSC--------- 244 Query: 289 GKRLSDHCPIS 299 LSDH PI Sbjct: 245 ---LSDHRPIL 252 >gi|126173135|ref|YP_001049284.1| endonuclease/exonuclease/phosphatase [Shewanella baltica OS155] gi|125996340|gb|ABN60415.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS155] Length = 870 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 48/378 (12%), Positives = 102/378 (26%), Gaps = 88/378 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQ-EGVSLWKNSVKRTTSDYT-------LLRQYAKNLDA 66 + + +R+ S+N+ +G + R + ++A Sbjct: 455 APSVATKGDLRVASFNVLNFFNDVDGGDTNPSGSNRGALTLEEMVLQRTKIVSAITAMNA 514 Query: 67 DIVFLQEMGSYNAVAKVF-------------PKNTWCIFYSTERLINHSKRDSNNDIHTA 113 DIV L E+ + K P+N + T K + I Sbjct: 515 DIVGLMEIANNGFGEKSAIKNLVDALNEKQTPENAYSFVEITYADKYDGKYFGTDAITVG 574 Query: 114 IAVRKKNVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155 + R V + + ++ + + A R ++ +I+ + Sbjct: 575 MLYRGGKVTLAGAAQAIETPEQHASAGSVTRTKDGKTETNPGNDAYQRHSLAQTFKIHDE 634 Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES--- 201 + V+ HLKS + + A+ L + + K Sbjct: 635 SLTVVVNHLKSKGSGCLEDWANFEESVDPADQQGKCNAFRVSAAKVLGEMLKDVKGDLLI 694 Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPK 239 P + DF+ + W T+D + K Sbjct: 695 IGDMNAYGMEDPIRVLTDFDASKSDRDIMTASWTTLDGKVFERQGSKIEKGYGLINLNTK 754 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291 + + +D+ + + + K L+ I E ++ GK+ Sbjct: 755 AHGAGTYSYSYNGELGNLDHALANASLAKRLVDIEDWHINSVESNLFEYGKKFSGDLAKS 814 Query: 292 -----LSDHCPISIDYDF 304 SDH P+ + + Sbjct: 815 ENAFSASDHDPVIVALSY 832 >gi|77459871|ref|YP_349378.1| exonuclease III [Pseudomonas fluorescens Pf0-1] gi|77383874|gb|ABA75387.1| exodeoxyribonuclease III [Pseudomonas fluorescens Pf0-1] Length = 270 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 36/313 (11%), Positives = 80/313 (25%), Gaps = 76/313 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L + D++ LQE ++ Sbjct: 1 MKIVSFNINGL----------------RARPHQLAALIEKHQPDVIGLQETKVHDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + H +A+ + + +D+ R Sbjct: 41 ------QFPLEEVRALGYHVYFHGQKGHYGVALLSRQEPIAVHKGFATDEEDA-----QR 89 Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + NG + +++ F + + L+ + + + Sbjct: 90 RFIWGTFADANGVPVTIMN-----GYFPQGESRDHPTKFPAKQRFYSDLQALLESQFHNE 144 Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241 P V+ GD N ++L ++ + F Sbjct: 145 QPLVVMGDVNISPEDCDIGIGPDNMKRWLKTGKCSFLPEEREWMARLKNWGLTDSFRHLN 204 Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + + D + Sbjct: 205 PDVTDTFSWFDYRSRGFEDEPKRGLRIDVILASHGLLPRVKAAGV-------DYELRGME 257 Query: 291 RLSDHCPISIDYD 303 + SDH PI ++ Sbjct: 258 KPSDHAPIWLELS 270 >gi|118580060|ref|YP_901310.1| exonuclease III [Pelobacter propionicus DSM 2379] gi|118502770|gb|ABK99252.1| Exodeoxyribonuclease III [Pelobacter propionicus DSM 2379] Length = 270 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 38/314 (12%), Positives = 82/314 (26%), Gaps = 78/314 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++VS+N+N L S L +I+ LQE + Sbjct: 1 MKIVSFNVNGL----------------RSRLHQLEALINAQRPEIIALQETKVRDEEFPV 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + H +A+ + Q LG A Sbjct: 45 DAVQSLGYHVVFH------------GQKTHYGVALLSRLPLQDVQ----LGLPGDGDEAQ 88 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + +G + V++ F ++ + L + + + Sbjct: 89 KRFIAATIPLSDGTPVRVIN-----GYFPQGENRDHAVKFPAKQRFYAELLGHLQGECDP 143 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 P V+ GDFN L +++ + F + Sbjct: 144 ATPLVVLGDFNVAPRDMDLGIGTDNVKRWLKSGKCCFLPEERLWFECLIEWGLHDSFREL 203 Query: 241 KDSRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + + ID+ ++ ++ D Sbjct: 204 NPAVADRFSWFDYRSRGFEGEPKRGLRIDHILLTRSLLARCRAAGI-------DYDIRSM 256 Query: 290 KRLSDHCPISIDYD 303 + SDHCP+ ++ + Sbjct: 257 AKPSDHCPVWVEIE 270 >gi|313158155|gb|EFR57560.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 302 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 40/327 (12%), Positives = 95/327 (29%), Gaps = 49/327 (14%) Query: 2 IRKYVLALVFFLVPC---------TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS 52 +++++ ++ + + ++ ++S+NI + + + Sbjct: 1 MKRFLFSIALLFTALAGCSNHEGESTAPKSELNVMSYNIRYANASDKGDAA------WDA 54 Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 +++ D++ +QE A + + +Y + Sbjct: 55 RKEASVAMIRDVKPDVIGMQEPRFSQAQYLIGELTEYEHYYLAPDDKDSQH-------RN 107 Query: 113 AIAVRKKNVRVLQQSYPLLGAKD------SFSRAGNRRAVELLV--EINGKKIWVLDIHL 164 A+ RK +L Q Y L KD + R A+ + + GK+ + + HL Sbjct: 108 AVWWRKDRFEMLAQGYFFLNEKDITQPIKGWGHNQFRTALWVKLRERSTGKEFFFFNTHL 167 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 + + ++ + + + + Q P + GD N Sbjct: 168 AHRASPVEGGDIDQVA---RTESVKLIVEQMKQIAGRYAPIFVTGDMNASYAAGDGRRTC 224 Query: 225 WKTIDP--NDSLIRFPKEKDSRCNANK-----NLRNKIPIDYFVMDQNAYKFLIQESFSE 277 + P + + R ID+ + + F Sbjct: 225 LDGFFEFMWSARETAPDGEADDVYSYNNFGEGTPRFTWNIDHIFYRK-----VTPVRFRT 279 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 I + + +SDH PI +F Sbjct: 280 INNDGYGVP----YISDHFPILFTSEF 302 >gi|148255795|ref|YP_001240380.1| exodeoxyribonuclease III [Bradyrhizobium sp. BTAi1] gi|146407968|gb|ABQ36474.1| Exodeoxyribonuclease III [Bradyrhizobium sp. BTAi1] Length = 263 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 91/304 (29%), Gaps = 69/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N L + K DIV LQE+ + Sbjct: 1 MRIATWNVN----------------SVRQRIEHLVTWLKECSPDIVCLQEIKCTDDA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ +A+ K +S +D +R Sbjct: 42 -------FPRLEIEALGYNVVTHGQKTFNGVALLSKLPFDETRSGLDGDVEDVHARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E +V + + + ++L + ++ + Y + L+D+ ++ ++ Sbjct: 92 --LEGVVSLKHGVVRIACLYLPNGNPPNTEKYPYK------LKWMSRLRDYTRERLKTEE 143 Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++AGDFN + ++ + D+ Sbjct: 144 PLILAGDFNVIPAAADVSNPEAWVEDALFRPETRESFQALLGLGLTDALRAVTDAP-GQY 202 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ A L++ D ++ SDH P+ Sbjct: 203 TFWDYQAGAWQKNAGIRIDHLLLSPQASDRLVEVGI-------DSYVRAWEKPSDHVPVW 255 Query: 300 IDYD 303 D+D Sbjct: 256 ADFD 259 >gi|332820251|ref|XP_003310517.1| PREDICTED: nocturnin [Pan troglodytes] Length = 365 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 41/293 (13%), Positives = 92/293 (31%), Gaps = 22/293 (7%) Query: 23 KVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-N 78 +R++ WNI L E ++ + L+ + DI+ LQE+ Y + Sbjct: 76 PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHYFD 135 Query: 79 AVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + + + + +N A+ + +++ + L A Sbjct: 136 TFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLTAMTLK 195 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWLKDWIT 196 + A L + +G++ + HLK+ + S Q L++ Sbjct: 196 TN-QVAIAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGCDLLQNLQN 244 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--- 253 + + +P ++ GDFN + +++ N + + S Sbjct: 245 ITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQSEPPYTTWKIRTSG 304 Query: 254 --KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +DY ++A + SDH + D+ F Sbjct: 305 ECRHTLDYIWYSKHALNVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 357 >gi|257092446|ref|YP_003166087.1| exodeoxyribonuclease III Xth [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044970|gb|ACV34158.1| exodeoxyribonuclease III Xth [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 255 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 82/304 (26%), Gaps = 74/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N+L L + DIV LQE Sbjct: 1 MKIASWNVNSL----------------KVRLPQLLDWLAAEQPDIVCLQET--------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S + +A+ + +S + + + Sbjct: 36 -KLEDHAFPQQEVEAAGYHVAFSGQKTYNGVALLAR------ESPSDVVCGNPLHADQQK 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R V + I V+ ++ + + S + Y + L W+ + + Sbjct: 89 RLVAATI----GGICVVCAYVPNGQAVGSDKYAYKLA------WLDALTRWLKGRLAANP 138 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+AGDFN ++ + L + + + Sbjct: 139 RLVVAGDFNIAPEDRDVYNPAAWAGQILCSAPERAAFQRLLDLG-LKDSFRLFEQPEKSF 197 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ++ ID+ ++ + + + +R SDH P++ Sbjct: 198 SWWDYRMLGFQKNQGLRIDHILLSEPLAGICTVAGI-------NRHMRKLERPSDHAPVT 250 Query: 300 IDYD 303 + Sbjct: 251 AELT 254 >gi|62858061|ref|NP_001016531.1| CCR4 carbon catabolite repression 4-like [Xenopus (Silurana) tropicalis] gi|89267365|emb|CAJ82796.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Xenopus (Silurana) tropicalis] gi|213627135|gb|AAI70786.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Xenopus (Silurana) tropicalis] Length = 458 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 96/299 (32%), Gaps = 22/299 (7%) Query: 17 TASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + S + R++ WNI L E ++ + + L+ + D++ LQE Sbjct: 163 SGSQPRSFRVMQWNILAQALGEGKDNFIMCPMEALKWEERKYLILEEILMYQPDVLCLQE 222 Query: 74 MGSY-NAVAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + Y + + + + F + +N A+ + R++ + L Sbjct: 223 VDHYFDTFQPILSRLGYQCTFLAKPWSPCLDVEHNNGPDGCALFFLQDRFRLVNSAKIRL 282 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQW 190 A+ + A L G+ + HLK+ + Q + Sbjct: 283 SARTLKTN-QVAIAETLQCCETGRLLCFAVTHLKA----------RTGWERFRLAQGSDL 331 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 L + + + + VP +I GDFN + +++ N + ++ +S Sbjct: 332 LHNLESITEGATVPLIICGDFNAEPTEEVYKRFASSSLNLNSAYKLLSEDGESEPPYTTW 391 Query: 251 L-----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +DY Q+A + + SDH + D+ F Sbjct: 392 KIRPTGESCHTLDYIWYSQHALRVNSALGLPTEEQIGPNRLPSFNYPSDHLSLVCDFSF 450 >gi|153839235|ref|ZP_01991902.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AQ3810] gi|149747230|gb|EDM58218.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AQ3810] Length = 434 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 46/294 (15%), Positives = 90/294 (30%), Gaps = 42/294 (14%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---YN 78 Q ++L+++NI L Y L+ Y K D++ LQE+ + Sbjct: 168 QNLKLMTYNIWALPAIASHIGD---------RYELIPDYVKGY--DVLALQEVFASGRDA 216 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + ++ + + + D I R V Q +P D F+ Sbjct: 217 FLRELAKDYPYQTKMLDKDD------FNVYDGGVVIVSRYPIVNEAQYVFPDCSGTDCFA 270 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + G+ V H SF + E QQ + + + Sbjct: 271 DK---GVNYAEIIKGGQAYHVFATHTASFDTDTAREYRQRQ-----FQQMRTMAQSLN-- 320 Query: 199 KESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL------ 251 + V +GDFN + + G+ + + + S + N Sbjct: 321 IPNNETVVYSGDFNVNKLKFPGDYQQMIANLSAMEPQ--YSGYTASTFDPRINNFAGEAL 378 Query: 252 ---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +DY ++ ++ ++ + + + LSDH P+S Sbjct: 379 SGGENVEYLDYVMVSNEYGVKSFNDNRVDVPRSTAEGLWKHYNLSDHFPVSAVI 432 >gi|227538655|ref|ZP_03968704.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum ATCC 33300] gi|227241574|gb|EEI91589.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum ATCC 33300] Length = 258 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 38/289 (13%), Positives = 86/289 (29%), Gaps = 52/289 (17%) Query: 16 CTA-SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 C+ Q ++++S+NI+ + + D + + + AD+V LQE+ Sbjct: 17 CSPVFGQQPLKILSYNIHHGNPPSKPGI---------IDLEAIAKVIRTSGADVVGLQEI 67 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 ++ + + + SK + K + L Sbjct: 68 DVNVGRSEHVDQAKKLAELAGMKYYFFSKGIDLEKGEYGTLILSKFPITNTERLELPMP- 126 Query: 135 DSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 ++ R ++I GK+I + HL QA+++ Sbjct: 127 ---VKSEMRSLGIAKIKIPSGKEILFANTHLDLK-------------EENRIAQAKFI-- 168 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 + +++ V+ GD N + F + + + Sbjct: 169 -VNHFQDTKHLVVLVGDLNAQPQSEPIKIL----------GDFFKRSEVPNGFTIPEVNP 217 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ +++++ + E Y SDH P+ + Sbjct: 218 NREIDFIMVNKSKNPKFQNHTVIEESY-----------ASDHRPVYAEL 255 >gi|228956424|ref|ZP_04118235.1| Sphingomyelinase C [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228803257|gb|EEM50065.1| Sphingomyelinase C [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 348 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 100/307 (32%), Gaps = 37/307 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQTDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + +I GD N +KT++ + Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 N +DY + ++ E+ + + + Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPQSPQWTVTSWFQKYTY 317 Query: 292 --LSDHC 296 SDHC Sbjct: 318 NDYSDHC 324 >gi|254254895|ref|ZP_04948212.1| hypothetical protein BDAG_04216 [Burkholderia dolosa AUO158] gi|124899540|gb|EAY71383.1| hypothetical protein BDAG_04216 [Burkholderia dolosa AUO158] Length = 607 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 92/315 (29%), Gaps = 47/315 (14%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ N + + + R Y + K LDAD++ L E+ Sbjct: 297 LRVASFNVLNYFNGNGVGGGFDDPDNRGAKTYQEFLRQDAKIVSALKALDADVIGLMEIQ 356 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + S R+++ R + I A+ + V P+ A Sbjct: 357 NNGYGELSAVRQLAAKLGSHWRVVDPGTPRLGGDAIAVAMIYDSRKVE------PVGRAA 410 Query: 135 DSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186 NR+ + + + + HLKS D+ + + ++ Sbjct: 411 TLAIDDKNRQPLAQSFRRIGGKQALTIAVNHLKSKNCPDAANDDLDQGDGQGCWNATRTR 470 Query: 187 QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A L DW+ + ++ GDFN + ++ + + Sbjct: 471 AAAKLADWLAGTPTGVAGQGVLLIGDFNSYTFEDPI-----RVLEARGYRNLVSRWVGAD 525 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287 + +D+ + + I +E Sbjct: 526 AYSYVYNGEAGYLDHALASLPLASHVKAVHEWHINADEPIALQYTLAYKSAEQQNTYYAP 585 Query: 288 RGKRLSDHCPISIDY 302 R SDH P+ +D Sbjct: 586 DAYRSSDHDPVLVDI 600 >gi|31083028|ref|NP_036250.2| nocturnin [Homo sapiens] gi|212276446|sp|Q9UK39|NOCT_HUMAN RecName: Full=Nocturnin; AltName: Full=CCR4 protein homolog gi|109731055|gb|AAI13495.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Homo sapiens] gi|109731718|gb|AAI13501.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Homo sapiens] gi|119625534|gb|EAX05129.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae), isoform CRA_a [Homo sapiens] gi|119625536|gb|EAX05131.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae), isoform CRA_a [Homo sapiens] Length = 431 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 41/293 (13%), Positives = 92/293 (31%), Gaps = 22/293 (7%) Query: 23 KVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-N 78 +R++ WNI L E ++ + L+ + DI+ LQE+ Y + Sbjct: 142 PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHYFD 201 Query: 79 AVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + + + + +N A+ + +++ + L A Sbjct: 202 TFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLTAMTLK 261 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWLKDWIT 196 + A L + +G++ + HLK+ + S Q L++ Sbjct: 262 TN-QVAIAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGCDLLQNLQN 310 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--- 253 + + +P ++ GDFN + +++ N + + S Sbjct: 311 ITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQSEPPYTTWKIRTSG 370 Query: 254 --KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +DY ++A + SDH + D+ F Sbjct: 371 ECRHTLDYIWYSKHALNVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 423 >gi|288929073|ref|ZP_06422919.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp. oral taxon 317 str. F0108] gi|288330057|gb|EFC68642.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp. oral taxon 317 str. F0108] Length = 313 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 32/314 (10%), Positives = 77/314 (24%), Gaps = 33/314 (10%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 L L L A+ Q + L S+NI ++ + + ++ Sbjct: 13 LLLGVVLCMAFAAFGQTLVLGSYNIRYRNDGD-----EAKGHLWAKRCQVIADQLNYHHP 67 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D QE+ + + + + + + + Sbjct: 68 DAFGAQEVLKGQLDDLLRALPDYDYVGVGRDDGHEAGEYAPIFYRRDRLDKLSDGYFWLS 127 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 + A R + L +L + + Sbjct: 128 PT-YTTPSLGWDAACIRICTWAKFRVRESGEVFLFFNLHTDHVG----------VKARRE 176 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 A+ + I +P V+ GDFN + ++ + ++ Sbjct: 177 SAKLVMKAIDGLGGKDMPVVLTGDFNVDQTDETYAIFTANARLNDAYVVAKHRFAENGTF 236 Query: 247 ANKNL--RNKIPIDYFVMDQNAYK---------------FLIQESFSEILYNEDDIKSRG 289 + + + ID+ + + + D + R Sbjct: 237 NSFDPTLKTTSRIDHVFVSPRFAVARYGVLPNFYWTEEPAAKSQKGQDAPQQIDFKQHRI 296 Query: 290 KRLSDHCPISIDYD 303 + SDH P+ ++ + Sbjct: 297 RTASDHYPVFVEVN 310 >gi|27379872|ref|NP_771401.1| exonuclease III [Bradyrhizobium japonicum USDA 110] gi|27353025|dbj|BAC50026.1| exonuclease III [Bradyrhizobium japonicum USDA 110] Length = 273 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 99/314 (31%), Gaps = 69/314 (21%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +P +V +R+ +WN+N LL + K DIV LQE Sbjct: 1 MPLPGAVEMPIRVATWNVN----------------SVRQRIDLLLTWLKECQPDIVCLQE 44 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + V + FP+ + ++ +A+ K +S Sbjct: 45 I---KCVDEAFPRLE-------IEALGYNVVTHGQKTFNGVALLSKLRFDETKSGLAGDD 94 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 +D+ +R +E +V + + + ++L + + + + Y + L + Sbjct: 95 EDAHARF-----LEGVVTLKHGVLRIACLYLPNGNPVGTEKYPYK------LKWMSRLLE 143 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFP 238 + ++ ++ P ++AGDFN + ++ ++++ Sbjct: 144 YSKERLKTEEPLILAGDFNVIPHARDVHNPAAWTEDALFKTETRESFQSLLGLGLTDALR 203 Query: 239 KEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 D + ID+ ++ A L D Sbjct: 204 AVTDEP-GLYTFWDYQAGAWQKNHGLRIDHLLLSPQASDRLANVGI-------DSYVRAW 255 Query: 290 KRLSDHCPISIDYD 303 ++ SDH P+ D D Sbjct: 256 EKPSDHVPVWADLD 269 >gi|221197415|ref|ZP_03570462.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2M] gi|221204089|ref|ZP_03577107.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2] gi|221176255|gb|EEE08684.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2] gi|221183969|gb|EEE16369.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2M] Length = 603 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 88/315 (27%), Gaps = 47/315 (14%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRT--------TSDYTLLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ G+ + + K LDAD++ L E+ Sbjct: 293 LRVASFNVLNYFNGNGLGGGFDDPNNRGAKTYQEFQRQEAKIVSALKALDADVIGLMEIQ 352 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + + + R + I A+ + V P+ A Sbjct: 353 NNGYGELSAVRQLAAKLGGAWRVVDPGTSRLGGDAIAVAMIYDSRKVE------PVGRAA 406 Query: 135 DSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186 NR+ + + + ++ HLKS D+ + ++ Sbjct: 407 TLAIDDKNRQPLAQSFRRIGGKQALTIVVNHLKSKNCPDATNDDLDQGDGQGCWNPTRTR 466 Query: 187 QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A L DW+ + ++ GDFN + ++ + + Sbjct: 467 AAAKLADWLAGTPTGVAGQGVLLIGDFNSYTYEDPI-----RLLESRGYRNLVSRWIGAN 521 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR---------------- 288 + +D+ + + I +E Sbjct: 522 AYSYVYNGEAGYLDHALASLPLASHVKAVHEWHINADEPVALQYTLAYKSAEQQQTYYAP 581 Query: 289 -GKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 582 DAYRSSDHDPVLIDI 596 >gi|73984049|ref|XP_540938.2| PREDICTED: similar to CCR4 carbon catabolite repression 4-like [Canis familiaris] Length = 474 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 37/297 (12%), Positives = 84/297 (28%), Gaps = 20/297 (6%) Query: 18 ASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 S +R++ WNI L E ++ + L+ + DI+ LQE+ Sbjct: 180 PSSHPPIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEV 239 Query: 75 GSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 Y + + + + + + +N A+ + +++ + L Sbjct: 240 DHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLT 299 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 A + A+ +E + C L+ Sbjct: 300 AMTLKTNQ---VAIVQTLECKESSRQFCIAVTHLKARTGWERFRSAQGC-------DLLQ 349 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + + + +P ++ GDFN + +++ N + + S Sbjct: 350 NLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQSEPPYTTWKI 409 Query: 253 N-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +DY ++A + SDH + D+ F Sbjct: 410 RTSGECRHTLDYIWYSKHALSVKSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 466 >gi|161521728|ref|YP_001585155.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC 17616] gi|189352108|ref|YP_001947735.1| putative extracellular endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC 17616] gi|160345778|gb|ABX18863.1| Endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC 17616] gi|189336130|dbj|BAG45199.1| putative extracellular endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC 17616] Length = 603 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 88/315 (27%), Gaps = 47/315 (14%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRT--------TSDYTLLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ G+ + + K LDAD++ L E+ Sbjct: 293 LRVASFNVLNYFNGNGLGGGFDDPNNRGAKTYQEFQRQEAKIVSALKALDADVIGLMEIQ 352 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + + + R + I A+ + V P+ A Sbjct: 353 NNGYGELSAVRQLAAKLGGAWRVVDPGTSRLGGDAIAVAMIYDSRKVE------PVGRAA 406 Query: 135 DSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186 NR+ + + + ++ HLKS D+ + ++ Sbjct: 407 TLAIDDKNRQPLAQSFRRIGGKQALTIVVNHLKSKNCPDATNDDLDQGDGQGCWNPTRTR 466 Query: 187 QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A L DW+ + ++ GDFN + ++ + + Sbjct: 467 AAAKLADWLAGTPTGVAGQGVLLIGDFNSYTYEDPI-----RLLESRGYRNLVSRWIGAN 521 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR---------------- 288 + +D+ + + I +E Sbjct: 522 AYSYVYNGEAGYLDHALASLPLASHVKAVHEWHINADEPVALQYTLAYKSAEQQQTYYAP 581 Query: 289 -GKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 582 DAYRSSDHDPVLIDI 596 >gi|297674359|ref|XP_002815200.1| PREDICTED: nocturnin-like [Pongo abelii] Length = 431 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 41/293 (13%), Positives = 92/293 (31%), Gaps = 22/293 (7%) Query: 23 KVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-N 78 +R++ WNI L E ++ + L+ + DI+ LQE+ Y + Sbjct: 142 PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHYFD 201 Query: 79 AVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + + + + +N A+ + +++ + L A Sbjct: 202 TFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLTAMTLK 261 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWLKDWIT 196 + A L + +G++ + HLK+ + S Q L++ Sbjct: 262 TN-QVAIAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGCDLLQNLQN 310 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--- 253 + + +P ++ GDFN + +++ N + + S Sbjct: 311 ITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQSEPPYTTWKIRTSG 370 Query: 254 --KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +DY ++A + SDH + D+ F Sbjct: 371 ECRHTLDYIWYSKHALNVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 423 >gi|242239395|ref|YP_002987576.1| exodeoxyribonuclease III [Dickeya dadantii Ech703] gi|242131452|gb|ACS85754.1| exodeoxyribonuclease III [Dickeya dadantii Ech703] Length = 268 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 81/312 (25%), Gaps = 75/312 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE ++ V Sbjct: 1 MKFVSFNINGL----------------RARPHQLAAVIEQHQPDVIGLQETKVHDDV--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + H +A+ +N + + +D+ R Sbjct: 42 -------FPLEDVAKFGYHVFYHGQKGHYGVAMLTRNTPLAVRRGFPTDEEDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + +E + V++ F + ++ Q L+ ++ + Sbjct: 90 RIIMADLETPLGTLTVIN-----GYFPQGESRDHPVKFPAKTRFYQDLQHYLEHHHNAEQ 144 Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 P +I GD N + + + + F + Sbjct: 145 PVLIMGDMNISPTDLDIGIGEDSRKRWLRTGKCSFLPEEREWMLR-LQDWGLVDTFRAQN 203 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID + Q D ++ Sbjct: 204 PECRDRFSWFDYRSSGFDDNRGLRIDLILASQPLASRCSATGI-------DYAIRSMEKP 256 Query: 293 SDHCPISIDYDF 304 SDH PI ++ F Sbjct: 257 SDHAPIWAEFAF 268 >gi|271964770|ref|YP_003338966.1| extracellular nuclease-like protein [Streptosporangium roseum DSM 43021] gi|270507945|gb|ACZ86223.1| extracellular nuclease-like protein [Streptosporangium roseum DSM 43021] Length = 795 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 96/315 (30%), Gaps = 40/315 (12%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +P V V++ S+N G N+ ++ L K ++AD+V L E Sbjct: 490 LPAPFPVLGNVKVASFNTLNWFTTLGSRGASNAGEQ-QRQLAKLVAALKGMNADVVGLME 548 Query: 74 MGS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + + AV + + T + H ++ IH A+ + ++++ Sbjct: 549 VQNNGQTAVQALVDALNAEVGAGTYAALAHPYPGTDL-IHVAMIYKPGRLQLV------G 601 Query: 132 GAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCS------- 182 A+ S R + G+ ++ H KS D + Sbjct: 602 AAQSSADPVFRRPPLIQTFRRVQGGQPFTMIVNHFKSKGCDDEATGPDADQGDGQSCYNG 661 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 +QA+ I + ++ GD N + T++ + Sbjct: 662 ERVRQAEATLGLIDSLELPNP--LVLGDLNAYGEEDPID-----TLETGGLTSVTKRFVP 714 Query: 243 SR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------------ 289 + + +D+ ++ + K + + I +E I Sbjct: 715 APLRYSYLYEGQLGELDHALVGKALLKRVTSATIWHINADESRILDYNTEYNPPALYRPD 774 Query: 290 -KRLSDHCPISIDYD 303 R SDH P+ I Sbjct: 775 AFRSSDHDPVVIGLT 789 >gi|217969881|ref|YP_002355115.1| exodeoxyribonuclease III Xth [Thauera sp. MZ1T] gi|217507208|gb|ACK54219.1| exodeoxyribonuclease III Xth [Thauera sp. MZ1T] Length = 254 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 32/301 (10%), Positives = 78/301 (25%), Gaps = 70/301 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + + D + LQE Sbjct: 1 MKIATWNVNSL----------------KVRLPQVLDWLAANQPDALCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + + Sbjct: 35 LKLEDKAFPLAELEAAGYHAVFIGQKTYNGVAILSPQPIDAATVVRNIPG----FEDEQK 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V+ + + + S + Y + L +W+ + ++ Sbjct: 91 RIIAATI----AGVRVVCGYFPNGQAVGSDKFEYK------LRWLAALTEWLRAELKTHE 140 Query: 204 PFVIAGDFNRKINYLG-------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 V+AGDFN ++ + + F + + A Sbjct: 141 RLVLAGDFNIAPEDRDAHPDWKDEIHVSAPERAAFRALQELGLIDAF-RLFEQPERAFSW 199 Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 ++ ID+ ++ D R +R SDH P+ ++ Sbjct: 200 WDYRMMAFRRNFGLRIDHLLVSPALRAACRNC-------VVDKEPRRLERPSDHAPVVLE 252 Query: 302 Y 302 Sbjct: 253 L 253 >gi|330965345|gb|EGH65605.1| exonuclease III [Pseudomonas syringae pv. actinidiae str. M302091] Length = 270 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 33/312 (10%), Positives = 80/312 (25%), Gaps = 74/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ ++ + G + + R Sbjct: 41 ------QFPLADVEALGYHVHFHGQKGHYGVALLSRSPPLALHK----GFEGDDEESQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + NG+ + +++ F + + + L+ + + Sbjct: 91 FIRGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQALLEGHFSNDQ 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 P ++ GD N ++L ++ + + + F Sbjct: 146 PLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRYLYP 205 Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + + D ++ Sbjct: 206 EVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKAAGV-------DYDLRGMEK 258 Query: 292 LSDHCPISIDYD 303 SDH PI ++ Sbjct: 259 PSDHAPIWLELS 270 >gi|315506688|ref|YP_004085575.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. L5] gi|315413307|gb|ADU11424.1| Endonuclease/exonuclease/phosphatase [Micromonospora sp. L5] Length = 320 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 98/314 (31%), Gaps = 33/314 (10%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A + +++WN+ L E ++ T+ T L AD+V LQE+GS A Sbjct: 2 ANNLIVMTWNVENLFPPED--TDTSAADTYTAKLTYLAGLIVGTGADVVALQEIGSLRAA 59 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS-R 139 + + + + + + P + D + Sbjct: 60 QDLQAALGEPWQAVVSSHPDSRGIRVAVLARHPLTEEAQILALPPSGLPAVPDVDGDTLT 119 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSF--CFLDSLENTYSPSCS---------LLSQQA 188 R A+++ V+ G + +L HLKS + D + + +A Sbjct: 120 HMGRGALQVHVDCGGVGLRLLTAHLKSKLLTYPDGRRYPLNEDERARGAGYALLRRTAEA 179 Query: 189 QWLKDWITQKKE-------SLVPFVIAGDFNRKIN-------YLGNNDDFWK--TIDPND 232 L+ + + +P ++ GD N + + D + D Sbjct: 180 VALRVHLNKALAAAAVNGQPGMPTILCGDLNDGPDAITTVLLEGPADGDVNRPDKGDAVR 239 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR- 291 + +R + N ID+ + ++ LI +R ++ Sbjct: 240 LYNLGRRLPPARAYSRIYQGNGELIDHILATRDLQLQLITIDSLVDDITSIGASTRSRKK 299 Query: 292 --LSDHCPISIDYD 303 + DH P+ ++ Sbjct: 300 TVVPDHAPVIARFN 313 >gi|254445739|ref|ZP_05059215.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae bacterium DG1235] gi|198260047|gb|EDY84355.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae bacterium DG1235] Length = 278 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 36/299 (12%), Positives = 64/299 (21%), Gaps = 28/299 (9%) Query: 3 RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 +++ L + A ++ L ++N+ +G + + + Sbjct: 1 MRFLNPLAALFFLVASVSATELTLSTYNLRLEIASDG-------PNQWENRREQVANQIA 53 Query: 63 NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 L DI+ +QE + + S + + Sbjct: 54 FLAPDILGVQEALPQQVDYLEQNLAGYSYIGVGRHDGIRAGEHSAIYYRDSTTELLDSST 113 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 P + R K + Sbjct: 114 FWLSPTPDTP-SYGWGVHYRRICTYGHFRDRQTKTTYWVFNTHF----------DHEMPE 162 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 A+ + D I P + GD N + K D + Sbjct: 163 ARLNGAKLILDRIATLVSPNEPHFLMGDLNATPDSPPIKLISAKLQDTRLHSTGPVFGSE 222 Query: 243 SRCNAN-KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 NA IDY + Y G+ SDH PI I Sbjct: 223 GTFNAFDPTTIPTRRIDYIFASPEN---------TITAYATLSDLIDGRYPSDHFPIVI 272 >gi|15965272|ref|NP_385625.1| putative exodeoxyribonuclease III protein [Sinorhizobium meliloti 1021] gi|307309295|ref|ZP_07588963.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti BL225C] gi|307317036|ref|ZP_07596477.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti AK83] gi|15074452|emb|CAC46098.1| Putative exodeoxyribonuclease III [Sinorhizobium meliloti 1021] gi|306897124|gb|EFN27869.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti AK83] gi|306900296|gb|EFN30913.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti BL225C] Length = 263 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 91/305 (29%), Gaps = 69/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + L + + + DI LQE+ S + Sbjct: 1 MKIATWNING----------------VKARLDGLVGWLRESNPDIACLQEIKSVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ K D SR Sbjct: 41 ------TFPRGEIEALGYHVETHGQKGFNGVALLSKVRPDEINRGLPGDPADEQSRF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + +NG + V ++L + +++ + Y + + L + Q+ Sbjct: 92 --IEGVFSVNGGALRVCCLYLPNGNPVETEKYPYKLA------WMRRLAAFAEQRLVLEE 143 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++AGD+N YL ++ + N + Sbjct: 144 PLILAGDYNVIPEAHDCWDVKVWRNDALYLPETRAAFRRL-RNLGFTDAVRATSDEAPLY 202 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ A L+ S + + ++ SDH P++ Sbjct: 203 SFWDYQAGCWQKNFGIRIDHLMLSPEAADKLVSTSIEKHV-------RAWEKPSDHVPVT 255 Query: 300 IDYDF 304 ++ F Sbjct: 256 AEFAF 260 >gi|194365350|ref|YP_002027960.1| endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia R551-3] gi|194348154|gb|ACF51277.1| Endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia R551-3] Length = 284 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 31/282 (10%), Positives = 78/282 (27%), Gaps = 29/282 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++S+N+ KR + + + ++ QE+ A Sbjct: 29 PLKVMSFNVR-------TPADTEPGKRWPDRRDAMVKVILDAHPAVIGTQELVKEQADYL 81 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + F R + + +++ P + S+ Sbjct: 82 SEHLPGYRWFGEGRR-GGSGDEHMGVFYDSKVLTIEESGNFWLSDTPDVPGSISWGNLYP 140 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + + A+ + + + Sbjct: 141 RMVTWAVFRRLDDDRRFYFMDTHLPYRDEDEPRRVKG--------AELIGKRLAS-LPAD 191 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 +P V+ GDFN + F + + ++ P+ + + +D+ ++ Sbjct: 192 LPVVLTGDFNSEPG-GDTYKAFSRVLQDTRPQVKAPQGPRLTFHDF-TGKATSQLDWVLV 249 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 F + DD + G SDH P+ ++ D+ Sbjct: 250 RG----------FHARSFLTDDRRIDGVLPSDHFPLVVELDW 281 >gi|289669936|ref|ZP_06491011.1| nuclease [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 378 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 85/324 (26%), Gaps = 35/324 (10%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60 L+L V +R+ S+N+ G + ++ + L Sbjct: 62 LSLPAMPTVVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 121 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIA 115 L AD+ L E+ + A + + I+ + I I Sbjct: 122 IVPLGADVAALMELENDGNGADAAVAQLVAALNAAGKDKDWQFIDTGSGPGEDAIRVGIV 181 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKS-FCFLDSL 173 R + + L G +R + +G V+ H KS C S Sbjct: 182 YRSSQATPVGKPATLTGGPFDNH---SRVPLAQAFRSASGATFVVVANHFKSKGCGNASG 238 Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWK 226 + A+ L W+ V+ GDFN Sbjct: 239 ADADQQDGQACWNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYALETPMRS---- 294 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + + F + + +D+ ++ K L I + D Sbjct: 295 -LRASGWQDAFAVAGVKQPYSFVYDGMSGRLDHALLSPAMAKQLRGAVEWHINADVMDAA 353 Query: 287 SRG-------KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 354 GYAKRNLPGPWRSSDHDPVLLGFS 377 >gi|194208445|ref|XP_001501284.2| PREDICTED: similar to CCR4 carbon catabolite repression 4-like [Equus caballus] Length = 450 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 41/298 (13%), Positives = 92/298 (30%), Gaps = 22/298 (7%) Query: 18 ASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 S +R++ WNI L E ++ + L+ + DI+ LQE+ Sbjct: 156 PSSHPPIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEV 215 Query: 75 GSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 Y + + + + + + +N A+ + +++ + L Sbjct: 216 DHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLT 275 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWL 191 A + A L + + ++ + HLK+ + S Q L Sbjct: 276 AMTLKTN-QVAIAQTLECKESSRQFCIAVTHLKA----------RTGWERFRSAQGCDLL 324 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 ++ + + +P ++ GDFN + +++ N + + S Sbjct: 325 QNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQSEPPYTTWK 384 Query: 252 RN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +DY ++A + SDH + D+ F Sbjct: 385 IRTSGECRHTLDYIWYSKHALSVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 442 >gi|221210702|ref|ZP_03583682.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD1] gi|221169658|gb|EEE02125.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD1] Length = 603 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 44/326 (13%), Positives = 90/326 (27%), Gaps = 50/326 (15%) Query: 16 CTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRT--------TSDYTLLRQYAKNL 64 TA +R+ S+N+ G+ + + K L Sbjct: 282 TTAPARDPHANLRVASFNVLNYFNGNGLGGGFDDPNNRGAKTYQEFQRQEAKIVSALKAL 341 Query: 65 DADIVFLQEMGSYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 DAD++ L E+ + + + + + + R + I A+ + V Sbjct: 342 DADVIGLMEIQNNGYGELSAVRQLAAKLGGAWRVVDPGTSRLGGDAIAVAMIYDSRKVE- 400 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP-- 179 P+ A NR+ + + + ++ HLKS D+ + Sbjct: 401 -----PVGRAATLAIDDKNRQPLAQSFRRIGGKQALTIVVNHLKSKNCPDATSDDLDQGD 455 Query: 180 ----SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 ++ A L DW+ + ++ GDFN + ++ Sbjct: 456 GQGCWNPTRTRAAAKLADWLAGTPTGVAGQGVLLIGDFNSYTYEDPI-----RLLESRGY 510 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR----- 288 + + + +D+ + + I +E Sbjct: 511 RNLVSRWIGANAYSYVYNGEAGYLDHALASLPLASHVKAVHEWHINADEPVALQYTLAYK 570 Query: 289 ------------GKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 571 SAEQQQTYYAPDAYRSSDHDPVLIDI 596 >gi|71281061|ref|YP_269348.1| extracellular ribonuclease/nuclease fusion protein [Colwellia psychrerythraea 34H] gi|71146801|gb|AAZ27274.1| extracellular ribonuclease/nuclease fusion protein [Colwellia psychrerythraea 34H] Length = 1310 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 45/320 (14%), Positives = 94/320 (29%), Gaps = 42/320 (13%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWK------NSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +++ S+N+ +G ++++ T + + K ++ADIV L E+ Sbjct: 929 SGSLKVASFNVLNYFNGDGAGQGFPTARGADTLEEFTRQSSKIVSALKEINADIVGLMEL 988 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN---VRVLQQSYPLL 131 + + + S ++ + A+ + + Sbjct: 989 ENDGFDSNSAIADLVKQLNSQVGEGTYNYVSLDQTGVGGDAIAVGIIYKPATVGIVGNAV 1048 Query: 132 GAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP-------SCS 182 S GNR+ + + + +++ + H KS S Sbjct: 1049 TTNQSPFDFGNRQPLVQTFKEIASNEELTIAVNHFKSKGSCGSASGNNLDQGDGQGCWNE 1108 Query: 183 LLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 L +Q A L W+ K S F+I GD N N I ++ Sbjct: 1109 LRTQAANGLTAWLNTKPTGTSDDDFLIIGDLNAYGKEDPIN-----AITNSNYHNLVADY 1163 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------- 289 S + +D+ + ++ + I +E I Sbjct: 1164 MGSTGYSYSFGGEIGYLDHALASDKLASQVVDTTVWHINADEPRIFDYNTEYKSSEQLST 1223 Query: 290 ------KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 1224 YFAEDAYRASDHDPVIVVLN 1243 >gi|297293391|ref|XP_002804251.1| PREDICTED: nocturnin-like [Macaca mulatta] Length = 431 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 41/293 (13%), Positives = 92/293 (31%), Gaps = 22/293 (7%) Query: 23 KVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-N 78 +R++ WNI L E ++ + L+ + DI+ LQE+ Y + Sbjct: 142 PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHYFD 201 Query: 79 AVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + + + + +N A+ + +++ + L A Sbjct: 202 TFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLTAMTLK 261 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWLKDWIT 196 + A L + +G++ + HLK+ + S Q L++ Sbjct: 262 TN-QVAIAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGCDLLQNLQN 310 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--- 253 + + +P ++ GDFN + +++ N + + S Sbjct: 311 ITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQSEPPYTTWKIRTSG 370 Query: 254 --KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +DY ++A + SDH + D+ F Sbjct: 371 ECRHTLDYIWYSKHALNVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 423 >gi|332231442|ref|XP_003264906.1| PREDICTED: nocturnin-like [Nomascus leucogenys] Length = 601 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 41/293 (13%), Positives = 92/293 (31%), Gaps = 22/293 (7%) Query: 23 KVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-N 78 +R++ WNI L E ++ + L+ + DI+ LQE+ Y + Sbjct: 312 PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHYFD 371 Query: 79 AVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + + + + +N A+ + +++ + L A Sbjct: 372 TFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLTAMTLK 431 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWLKDWIT 196 + A L + +G++ + HLK+ + S Q L++ Sbjct: 432 TN-QVAIAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGCDLLQNLQN 480 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--- 253 + + +P ++ GDFN + +++ N + + S Sbjct: 481 ITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQSEPPYTTWKIRTSG 540 Query: 254 --KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +DY ++A + SDH + D+ F Sbjct: 541 ECRHTLDYIWYSKHALNVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 593 >gi|238894275|ref|YP_002919009.1| exonuclease III [Klebsiella pneumoniae NTUH-K2044] gi|238546591|dbj|BAH62942.1| exonuclease III [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 272 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 80/312 (25%), Gaps = 73/312 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++ VS+NIN L + L + D++ LQE Sbjct: 2 AATMKFVSFNINGL----------------RARPHQLAAIVEKHQPDVIGLQE---TKVH 42 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +FP + ++ H +A+ K + + Sbjct: 43 DDMFP-------LEEVARLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPDDGEE 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + + + V++ F + + Q L++++ + Sbjct: 91 AQRRIIMAEIPSPFGNVTVIN-----GYFPQGESRDHETKFPAKAAFYQNLQNYLETELN 145 Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239 P +I GD N L ++ + + + + Sbjct: 146 KENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLLGWGLVDTWRQ 205 Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + ID + Q + ++ D + Sbjct: 206 ANPDNHEHFSWFDYRSKGFDDNRGLRIDLLLASQPLAQRCVETGI-------DYEIRGME 258 Query: 291 RLSDHCPISIDY 302 + SDH P+ + Sbjct: 259 KPSDHAPVWATF 270 >gi|119713777|gb|ABL97825.1| hypothetical protein ALOHA_HF1049E08.0013 [uncultured marine bacterium HF10_49E08] Length = 255 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 96/280 (34%), Gaps = 33/280 (11%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 +S+NI +G + W L+ + +N D++ LQE+ Sbjct: 1 MSFNIRLGVANDGENHWDKRK-------ELVLKTIQNFGPDLLGLQEVWHMQEEYLKEQL 53 Query: 87 NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146 + + + + R+ K P + S+ + R A Sbjct: 54 SNYAYYGRSRRMEPVEGEQCAVMYRKDRFEIVKGETFWLSETPEVIESKSWDSSLPRIAN 113 Query: 147 ELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +L++ N ++I++++ H F + + LL ++ Q L + V Sbjct: 114 WILLKDKKNNKQEIFLINTH-----FDHKGRESRKQAARLLKKRIQEL--------KGNV 160 Query: 204 PFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 ++ GDFN + + K +D + E++S + + ID+ + Sbjct: 161 RVIVTGDFNAREDSDPYLGLVDGKILDTYRMAHKSRTEEESTLSGWNGRTSGNRIDWVLC 220 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +N F + N D + G+ SDH P++ Sbjct: 221 TRN---------FRVLSANIDRSEFGGRYPSDHYPVTATL 251 >gi|146340991|ref|YP_001206039.1| exodeoxyribonuclease III [Bradyrhizobium sp. ORS278] gi|146193797|emb|CAL77814.1| exodeoxyribonuclease III [Bradyrhizobium sp. ORS278] Length = 263 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 93/304 (30%), Gaps = 69/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N L + K DIV LQE+ + Sbjct: 1 MRIATWNVN----------------SIRQRIEHLVTWLKECSPDIVCLQEIKCTDDA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ +A+ K +S A+D +R Sbjct: 42 -------FPRLEIEALGYNVVTHGQKTFNGVALLSKLPFDETKSGLDGDAEDVHARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E +V + + + ++L + ++ + Y + L+D+ ++ ++ Sbjct: 92 --LEGVVSLKSGVVRIACLYLPNGNPPNTEKYPYK------LKWMSRLRDYARERLKTEE 143 Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++AGDFN + ++++ D+ Sbjct: 144 PLILAGDFNVIPAAADVSNPEAWVEDALFRPETRESFQSLLGLGLTDALRAVNDAP-GQY 202 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ A L++ D ++ SDH P+ Sbjct: 203 TFWDYQAGAWQKNAGIRIDHLLLSPQASDRLVEVGI-------DSYVRAWEKPSDHVPVW 255 Query: 300 IDYD 303 D+D Sbjct: 256 ADFD 259 >gi|269929041|ref|YP_003321362.1| Endonuclease/exonuclease/phosphatase [Sphaerobacter thermophilus DSM 20745] gi|269788398|gb|ACZ40540.1| Endonuclease/exonuclease/phosphatase [Sphaerobacter thermophilus DSM 20745] Length = 635 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 37/290 (12%), Positives = 85/290 (29%), Gaps = 56/290 (19%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 V + + ++++NI + L + + + D+V LQE Sbjct: 399 VTAGPPLGPDITVITYNIQNGFSIDNYFA-----------LDALARTIEEVHPDVVVLQE 447 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + V+ + W +S + + + +D A+ + + Sbjct: 448 VSRGWLVSSGVDELRW---FSHRLGMPYVFGTNADDGIWGNAILTRAPILEVAHRQYTTT 504 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 ++ R + + + +WV HL + + + + Q L D Sbjct: 505 QNLK-----RGVIGVRLATERGDLWVFGTHL----------DDPTEAGQVRMTQVTELID 549 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 + P ++ GD N + + + + + + + +++ R Sbjct: 550 FW----GGRTPALLLGDLNAEPDS-----EVLQALAEAGFVDL-GEVLGPEAWTSEDHR- 598 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY + DI+ R SDH P+ Sbjct: 599 --RIDYILATTGIELR--------------DIEILDSRASDHRPVVARLT 632 >gi|308095136|ref|ZP_07663177.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus Peru-466] gi|308089221|gb|EFO38916.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus Peru-466] Length = 434 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 46/291 (15%), Positives = 88/291 (30%), Gaps = 36/291 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 Q ++L+++NI L Y L+ Y K D++ QE+ + A Sbjct: 168 QNLKLMTYNIWALPAIASHIGD---------RYELIPDYVKGY--DVLAFQEVFASGRDA 216 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + I I R V Q +P D F+ Sbjct: 217 FLRELAKEYPYQTKMLDKDGFNVYDGGVI---IVSRYPIVNEAQYVFPDCSGTDCFADK- 272 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + G+ V H SF + E QQ + + + + Sbjct: 273 --GVNYAEIIKGGQAYHVFATHTASFDTDTAREYRQRQ-----FQQMRTMAQSLN--IPN 323 Query: 202 LVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--------- 251 V +GDFN + + G+ + + + S + N Sbjct: 324 NETVVYSGDFNVNKLKFPGDYQQMIANLSAMEPQ--YSGYTASTFDPRINNFAGEALSGG 381 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +DY ++ ++ ++ + + + LSDH P+S Sbjct: 382 ENVEYLDYVMVSNEYGVKSFNDNRVDVPRSTAEGLWKHYNLSDHFPVSAVI 432 >gi|288920362|ref|ZP_06414673.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EUN1f] gi|288348239|gb|EFC82505.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EUN1f] Length = 484 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 89/298 (29%), Gaps = 26/298 (8%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + + + +WN+ + + +R D D+ L E+ Sbjct: 36 PSQGSSTLLDVGNWNVEWFGATGYGPTNEALQQ------QNVRDVMAGADMDVWGLSEVV 89 Query: 76 SYNAVAKVF-PKNTWCIFYSTERL----INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 S +A + + + + + + SN + A+ R ++ L Sbjct: 90 STSAFNTLVAGMPGYTGVVANDPIVTNGAQYYSDFSNTEQKVALVWRSSIATLVSAKVIL 149 Query: 131 LGAKDSF-SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 +F R + + + + + +H K+ + +L + +Q Sbjct: 150 TSQNSNFAGRPPVEFTLRGTFDGVTRDLVFIVLHAKAGS--------TQDAWNLRNPASQ 201 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYL---GNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 LK ++ + GD+N ++ GN + ++ + S Sbjct: 202 ALKAYLDTTYP-TQNVFVIGDWNDDVDTSITSGNASPYANFVNDTARYTFPTR-ALSLAG 259 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ + + S + + + SDH P+ YD+ Sbjct: 260 VASTASYSDFIDHQLTTNEVQAKYVTGSAKAFQ-PQAYVSNYATTTSDHYPVLARYDY 316 >gi|310823161|ref|YP_003955519.1| exodeoxyribonuclease III [Stigmatella aurantiaca DW4/3-1] gi|309396233|gb|ADO73692.1| Exodeoxyribonuclease III [Stigmatella aurantiaca DW4/3-1] Length = 257 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 85/303 (28%), Gaps = 72/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N + L + K D++ LQE+ +A Sbjct: 1 MKIASWNVN----------------SVRARQERLLNWLKAHQPDVLCLQELKCVDA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + +A+ K +LG D + R Sbjct: 41 ------DFPTEAVREAGYHAVTHGQKTYNGVAILSKAEPSDV----VLGLSDGVEDSHAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V+ ++ + +DS Y L+ ++ + Sbjct: 91 LIAATV-----SGVRVVSAYVPNGQAVDSPAYVYKLEWYSR------LRRYLEARHTPDQ 139 Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD+N + D D + + F K Sbjct: 140 PLVLCGDWNVAPEPIDVYDPAVWEGQTLFTLKERDALQQVCAFGLADTFRKLHPGVEKKF 199 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ + L++ D + +GK+ SDH P+ Sbjct: 200 SWWDYRGLSFPKNLGVRIDHIFATAPLVQRLVKAEI-------DREERKGKQPSDHAPVW 252 Query: 300 IDY 302 ++ Sbjct: 253 AEF 255 >gi|50121263|ref|YP_050430.1| exonuclease III [Pectobacterium atrosepticum SCRI1043] gi|49611789|emb|CAG75238.1| exodeoxyribonuclease III [Pectobacterium atrosepticum SCRI1043] Length = 268 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 36/310 (11%), Positives = 83/310 (26%), Gaps = 73/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L + D++ LQE ++ + + Sbjct: 1 MKVVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQETKVHDDMFPL 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K + + +D+ R Sbjct: 45 EDVSKY----------GYHVYYHGQKGHYGVALLCKEKPLEVRLGFPTDEEDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + V++ F + ++ Q L+ ++ Q + Sbjct: 90 RIIMADFATEHGTLTVVN-----GYFPQGENRDHPVKFPAKTRFYQDLQTYLEQHHSATQ 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P ++ GD N L ++ + + F Sbjct: 145 PLIVMGDVNISATDLDIGIGEESRKRWLRTGKCSFLPEEREWMARLQGWGLIDTFRAANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + + D ++ S Sbjct: 205 EGNDRFSWFDYRSSGFDDNRGLRIDLILASTFLAERCVATGI-------DYDIRGMEKPS 257 Query: 294 DHCPISIDYD 303 DH PI ++ Sbjct: 258 DHAPIWAEFT 267 >gi|307720642|ref|YP_003891782.1| Endonuclease/exonuclease/phosphatase [Sulfurimonas autotrophica DSM 16294] gi|306978735|gb|ADN08770.1| Endonuclease/exonuclease/phosphatase [Sulfurimonas autotrophica DSM 16294] Length = 338 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 42/336 (12%), Positives = 92/336 (27%), Gaps = 77/336 (22%) Query: 22 QKVRLVSWNINTLSEQEGVSLW----------KNSVKRTTSDYTLLRQYAKNLDADIVFL 71 + +++ ++N+ L + + + + + K+++ DI+ L Sbjct: 18 KTLKIATYNVENLFDLQRNGHEYKEYIPYTKSNWNDTNYKVKLKNIAKVIKDMNPDIIGL 77 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 QE+ S A+ + Y + K + +A+ K V + Sbjct: 78 QEIESLQALKDLRYALKRESIYYQ-----YYKIANLKRTTVKVAILSKIPFVYTHEIAVT 132 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + R +E +IN + ++VL H KS +S+ + Q+ Sbjct: 133 SS------YRYRNILEAKFKINNEDLYVLVNHWKSKAGPESMRIVSAKKLKKRMQEL--- 183 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNN--------------------------DDFW 225 + + GD N D Sbjct: 184 --------GAKKNIIALGDLNSDYEEYKIFKRKRKHNDTDGITGINHILGTINYQQDAKH 235 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF----LIQESFSEI--- 278 ID ++ + ++ + K +D ++ S S Sbjct: 236 TKIDSDELYNLWYDTDSAKRYSYIYRGKKEAMDNILISAALLDKKGLDYKLHSISVYEKP 295 Query: 279 ------------LYNEDDIKSRGKRLSDHCPISIDY 302 + +GK SDH P+ ++ Sbjct: 296 YLFKGKSIFRWQTTRSRLRRHKGKGYSDHLPVIAEF 331 >gi|325497093|gb|EGC94952.1| exonuclease III [Escherichia fergusonii ECD227] Length = 329 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 39/318 (12%), Positives = 85/318 (26%), Gaps = 73/318 (22%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +A ++ VS+NIN L + L + D++ LQE Sbjct: 53 SLSELMAATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE- 95 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 +FP + ++ H +A+ K + + Sbjct: 96 --TKVHDDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GF 141 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 RR + + + V++ F + +Q Q L+++ Sbjct: 142 PGDGEEAQRRIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNY 196 Query: 195 ITQKKESLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDS 233 + + + P +I GD N L ++ + + Sbjct: 197 LETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGL 256 Query: 234 LIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + F + + ID + Q + ++ D Sbjct: 257 VDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DY 309 Query: 285 IKSRGKRLSDHCPISIDY 302 ++ SDH P+ + Sbjct: 310 EIRSMEKPSDHAPVWATF 327 >gi|312882993|ref|ZP_07742724.1| putative phospholipase C [Vibrio caribbenthicus ATCC BAA-2122] gi|309369153|gb|EFP96674.1| putative phospholipase C [Vibrio caribbenthicus ATCC BAA-2122] Length = 441 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 89/294 (30%), Gaps = 38/294 (12%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 ++++++NI L + K+ R ++ Y D++ LQE+ + Sbjct: 171 VEPDENALKVMTYNIWALP-----VIAKHIGDRYQEIPKHVKGY------DVLALQEVFA 219 Query: 77 Y---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + ++ + + ++ N D I R V Q +P Sbjct: 220 AGRGEFLRELAKEYPYQTQMLDKKGPNIY------DGGVTIVSRYPIVNQTQFVFPDCTG 273 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 D F+ + G V H S+ + E +Q + L Sbjct: 274 TDCFADK---GVNYAEIIKGGVAYHVFATHTASYDTSTAREYRQRQ-----FKQMRQLAS 325 Query: 194 WITQKKESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDS-LIRFPKEKDSRCNANK-- 249 + + GDFN + G+ + + + + N Sbjct: 326 TLN--IPKNEAVIYGGDFNVNKRKFPGDYQQMLSNLSAIEPSYSGYTESTFDPRVNNFAG 383 Query: 250 ----NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + N +DY ++ ++ ++ + + + LSDH P+S Sbjct: 384 KIREDNGNVEYLDYVMVSNEYLNKSHSDNRVDVPRSTSEGLWKHFNLSDHFPVS 437 >gi|254513404|ref|ZP_05125469.1| alkaline phosphatase [Rhodobacteraceae bacterium KLH11] gi|221532408|gb|EEE35404.1| alkaline phosphatase [Rhodobacteraceae bacterium KLH11] Length = 2116 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 35/316 (11%), Positives = 82/316 (25%), Gaps = 43/316 (13%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A ++ + ++N+ ++ E + L DI+ LQE+ Sbjct: 1637 AGSKTELTVATYNVLNVTSNEADGDADQIAQLAQQIVNNLGS------PDILALQEIQDN 1690 Query: 78 NAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 + V + + + +I A ++ Sbjct: 1691 SGVTNDGTLDADETLQAIVDAIAAAGGPVYSFQSAVVDEDGENGGVPGGNIRNAFLYNEE 1750 Query: 120 NVR------VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL--- 170 V + +G + + G+R + + NG++I +++ H S Sbjct: 1751 RVEANSFLTLESNVLTDMGVTNPDTFEGSRDPLLGVFTFNGQEITLINNHFSSRFGSEPV 1810 Query: 171 -DSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 + QA + + + + + GD N +D Sbjct: 1811 FGGPQPFNQGGEDEREAQALTINEVVDGLLANDPDANIAVLGDLNTFDFTDELTEDLPGV 1870 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 D + + N +D+ + + + + + Sbjct: 1871 GDEQVLTNLIELAEGDEAYSFNFQGNSQALDHIFVTDSLLEGANVDFVHVNV-------D 1923 Query: 288 RGKRLSDHCPISIDYD 303 SDH PI + Sbjct: 1924 FADSASDHEPIVASFT 1939 >gi|332992625|gb|AEF02680.1| extracellular ribonuclease/nuclease fusion protein [Alteromonas sp. SN2] Length = 1340 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 35/316 (11%), Positives = 83/316 (26%), Gaps = 38/316 (12%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTT--SDYTLLRQYAKNLDADIVFLQEMGSYN 78 V++ S+N+ + + + + +DAD+V L E+ + Sbjct: 966 TGDVKVASFNVLNYFDGPDFPTSRGATNEFELVRQEAKIVAALAAMDADVVGLVEVENDG 1025 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSN-----NDIHTAIAVRKKNVRVLQQSYPLLGA 133 + +S + ++I + + V + + Sbjct: 1026 HGEDSAIATLTAAVNAEMGGDVYSYVSISEALGTDEIAVGMIYKPAVVTPFGNAVTSSES 1085 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP-------SCSLLSQ 186 + V NG+ + H KS S + +L + Sbjct: 1086 PFDYGNRQP-LLQSFTVNANGEAFTLAVNHFKSKGSCSSATGDNADSGDGQGCWNALRTD 1144 Query: 187 QAQWLKDWITQKKES-LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 A L + ++ +I GD N ++ Sbjct: 1145 AANGLVAIVENNSDTLSDRLLIMGDLNAYAAEEPIL-----ALESAGYTNLVNTFGGDSA 1199 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG---------------- 289 + +D+ + + ++++ + I +E + Sbjct: 1200 YSYTFGGELGYLDHALSSPSLTEYVVDATVWHINADEPRVFDYNEEYKTDAQITDYYGAD 1259 Query: 290 -KRLSDHCPISIDYDF 304 R SDH P+ + +F Sbjct: 1260 AYRSSDHDPVLVVLNF 1275 >gi|329119607|ref|ZP_08248288.1| exodeoxyribonuclease III [Neisseria bacilliformis ATCC BAA-1200] gi|327464204|gb|EGF10508.1| exodeoxyribonuclease III [Neisseria bacilliformis ATCC BAA-1200] Length = 276 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 36/308 (11%), Positives = 86/308 (27%), Gaps = 73/308 (23%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + Q +++ +WN+N+L+ ++ + DI+ LQE Sbjct: 9 TAPQTMKIATWNVNSLN----------------VRLPQVQNWLAEHQPDILALQE----- 47 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + ++ S + +A+ + ++ + Sbjct: 48 -----LKLDQDKFPAAALAMMGWQCAWSGQKTYNGVAIVSLHPLHDVRT-----GLPALP 97 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 RR + + + V++++ + DS + Y Q L +++ + Sbjct: 98 DDPQRRVIAATI----GGVRVINVYCVNGEAPDSPKFQYKK------QWFAALTEFVRGE 147 Query: 199 KESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDS 243 V+ GDFN D +++T+ + Sbjct: 148 LARHDKLVLLGDFNIAPADADCYDPEKWRGKILCTDQERGWFQTLLGLGLTDSLRRIHPE 207 Query: 244 RCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + ID+ + L + D +R SD Sbjct: 208 GAF-YTWFDYRGAMFQRGLGLRIDHLLTTPALAAALQNAAV-------DLDARAQERPSD 259 Query: 295 HCPISIDY 302 H P+ ++ Sbjct: 260 HAPVWAEF 267 >gi|115378940|ref|ZP_01466074.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca DW4/3-1] gi|310821513|ref|YP_003953871.1| endonuclease/exonuclease/phosphatase domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115364057|gb|EAU63158.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca DW4/3-1] gi|309394585|gb|ADO72044.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella aurantiaca DW4/3-1] Length = 319 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 48/296 (16%), Positives = 94/296 (31%), Gaps = 19/296 (6%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + + A V + WN+ + +R + DI L+ Sbjct: 39 VTIPSQGSATTVDIGCWNVEWFGSSSNGPTNDTLQQ------QNVRDVLLGSNLDIWGLE 92 Query: 73 EMGSYNAVAKVFPKNTWCIFY--STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 E+ S A + + + + S + + S S+++ I + V + Sbjct: 93 EVVSTTAFSNLKAQLSGYAGLLASDASVTSGSSFYSSSEQKVGILYKTSVASVQSARI-I 151 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 L A DS V++ V +NG ++ I + F D+ S + Sbjct: 152 LTANDSDFAGRPPLEVKMRVTLNGTARDIVVIVFHAKAFDDAT------SWQRRLNASNA 205 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYL--GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 LK ++ S P V+ GD+N ++ ++ + FP + S Sbjct: 206 LKAYLDSTYPST-PVVVLGDWNDDVDTSITSGKASPYQNFVSDAQDYFFPTKALSDAKVA 264 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ ++ + S + I S +DH P+ Y + Sbjct: 265 STASYPDMIDHQLVTNELKSLYVAGSAKVYRVDT-YISSYATTTTDHFPVLTRYAW 319 >gi|113866485|ref|YP_724974.1| metal-dependent hydrolase [Ralstonia eutropha H16] gi|113525261|emb|CAJ91606.1| Metal-dependent hydrolase [Ralstonia eutropha H16] Length = 260 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 98/286 (34%), Gaps = 51/286 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---- 78 K+R+V++NI+ + +R +DADIVFLQE+ N Sbjct: 2 KLRVVTYNIH----------KGVTGISRRPRIQNVRAGLHAMDADIVFLQEVQDRNDRLV 51 Query: 79 AVAKVFPKNTWCIFYS--TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 A A P++T + + + + + H A+ ++ ++ ++ + S Sbjct: 52 AAALFDPEHTQLNYLATDAYPHSVYGRNAVYDYGHHGNAILSRHPILMSENLDI-----S 106 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R R + + +++G + ++ +H F +QA+ L + + Sbjct: 107 DHRFEQRGLLHAVADVHGVETHLICVHFGLF-------------ARSRVRQAEALVERVR 153 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + +P VIAGDFN + I + + +R + + Sbjct: 154 TVVPAGMPLVIAGDFNDWNHR------LDAQICNTLGAVEASHARGARLHTFPSHMPWWQ 207 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + EI + SDH P+ + Sbjct: 208 LDRIYVRG-----------YEIERAHALTGRDWAQRSDHVPLVAEL 242 >gi|297564320|ref|YP_003683293.1| Endonuclease/exonuclease/phosphatase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848769|gb|ADH70787.1| Endonuclease/exonuclease/phosphatase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 634 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 91/291 (31%), Gaps = 48/291 (16%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 P AS + +R+ ++N+ +G + LDAD+V L Sbjct: 389 FAPAPASGTEGLRVAAYNVRMGFGMDGRFSVTEQ-----------AGALRRLDADVVVLS 437 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ + + + + AV ++ +PL Sbjct: 438 EVDRGWLLNGGNDVLSRLALELGMA----AHWGPADGPLWGDAVLTSLPVTRERRHPLTP 493 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + + ++ A+E+ V+ G + V+ H++ +Q + + Sbjct: 494 SGPTGAQ-----ALEVTVDHGGTGVTVVSTHVQP--------ADRGFRAESSRRQLREIA 540 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + + +E P V+AGD N + + D W + + L F + + Sbjct: 541 EIARRARERGTPVVVAGDLNIEPD-----DPAWGLLTEHGLLDAFRNTRPFPTLPGET-G 594 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ID+ + + D + SDH P+++ Sbjct: 595 SDQQIDHVLHTGDLAPS--------------DPANPDVPHSDHRPVAVTLT 631 >gi|326918342|ref|XP_003205448.1| PREDICTED: nocturnin-like [Meleagris gallopavo] Length = 379 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 44/293 (15%), Positives = 88/293 (30%), Gaps = 22/293 (7%) Query: 23 KVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-N 78 +R++ WNI L E ++ + L+ + DI+ LQE+ Y + Sbjct: 90 PIRVMQWNILAQALGEGKDNFVQCPMEALKWEERKCLILEEILAYKPDILCLQEVDHYFD 149 Query: 79 AVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + + + + +N A+ K+ ++ + L A Sbjct: 150 TFEPLLSRLGYQCTFFPKPWSPCLDVEQNNGPDGCALFFLKERFELINSANIRLTAMKLK 209 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 + A L G+ + HLK+ + S Q L + Sbjct: 210 TN-QVAIAQTLKCSETGRLFCIAVTHLKA----------RTGWERFRSAQGCDLLQNLKS 258 Query: 198 K-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI- 255 + + +P +I GDFN + + +++ N + + S Sbjct: 259 ITQGAKIPLIICGDFNAEPTEEVYREFSNSSLNLNSAYKLLSPDGQSEPPYTTWKIRPSG 318 Query: 256 ----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +DY Q+A + SDH + D+ F Sbjct: 319 ECRHTLDYIWYSQHALNVNSALGLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 371 >gi|224177590|gb|ACN38810.1| MIP06315p [Drosophila melanogaster] Length = 441 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 99/317 (31%), Gaps = 39/317 (12%) Query: 16 CTAS-VAQKVRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 C+A +RL+ WNI TL +G L+ Q D++ L Sbjct: 101 CSAPVEGDDIRLLQWNILSQTLGQHNDGFVRCPEEALTWEHRKYLIVQEILQNQPDVICL 160 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE+ + + V + + + +N AI ++ +++ + Sbjct: 161 QEVDHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYKRDKLQLQGYDTRI 220 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 L S A L + +G++ V HLK+ + L ++Q + Sbjct: 221 LEVWRVQSN-QVAIAARLRMRSSGREFCVATTHLKARHG--------ALLAKLRNEQGRD 271 Query: 191 LKDWITQKKESLVPFVIAGDFNRKI------------------NYLGNNDDFWKTIDPND 232 L ++ Q P ++ GDFN + Y D + + PN Sbjct: 272 LIRFVKQFAG-DTPLLLCGDFNAEPVEPIYATILGCDLLRLGSAYADVKLDREEILHPNA 330 Query: 233 SLIRFPKEKDSRCNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + F + R + + IDY + K F + Sbjct: 331 DVGEFVAKSMKREPPYTTWKIREEGEECHTIDYVFYTPDRLKIKNCLDFPAGEQIGKNRT 390 Query: 287 SRGKRLSDHCPISIDYD 303 + SDH + D++ Sbjct: 391 PSFQYPSDHFSLVCDFE 407 >gi|161078191|ref|NP_001097746.1| curled, isoform D [Drosophila melanogaster] gi|158030219|gb|ABW08640.1| curled, isoform D [Drosophila melanogaster] Length = 642 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 99/317 (31%), Gaps = 39/317 (12%) Query: 16 CTAS-VAQKVRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 C+A +RL+ WNI TL +G L+ Q D++ L Sbjct: 302 CSAPVEGDDIRLLQWNILSQTLGQHNDGFVRCPEEALTWEHRKYLIVQEILQNQPDVICL 361 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE+ + + V + + + +N AI ++ +++ + Sbjct: 362 QEVDHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYKRDKLQLQGYDTRI 421 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 L S A L + +G++ V HLK+ + L ++Q + Sbjct: 422 LEVWRVQSN-QVAIAARLRMRSSGREFCVATTHLKARHG--------ALLAKLRNEQGRD 472 Query: 191 LKDWITQKKESLVPFVIAGDFNRKI------------------NYLGNNDDFWKTIDPND 232 L ++ Q P ++ GDFN + Y D + + PN Sbjct: 473 LIRFVKQFAG-DTPLLLCGDFNAEPVEPIYATILGCDLLRLGSAYADVKLDREEILHPNA 531 Query: 233 SLIRFPKEKDSRCNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + F + R + + IDY + K F + Sbjct: 532 DVGEFVAKSMKREPPYTTWKIREEGEECHTIDYVFYTPDRLKIKNCLDFPAGEQIGKNRT 591 Query: 287 SRGKRLSDHCPISIDYD 303 + SDH + D++ Sbjct: 592 PSFQYPSDHFSLVCDFE 608 >gi|161078189|ref|NP_001097745.1| curled, isoform C [Drosophila melanogaster] gi|21654879|gb|AAK85704.1| nocturin [Drosophila melanogaster] gi|158030218|gb|ABW08639.1| curled, isoform C [Drosophila melanogaster] Length = 449 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 99/317 (31%), Gaps = 39/317 (12%) Query: 16 CTAS-VAQKVRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 C+A +RL+ WNI TL +G L+ Q D++ L Sbjct: 109 CSAPVEGDDIRLLQWNILSQTLGQHNDGFVRCPEEALTWEHRKYLIVQEILQNQPDVICL 168 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE+ + + V + + + +N AI ++ +++ + Sbjct: 169 QEVDHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYKRDKLQLQGYDTRI 228 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 L S A L + +G++ V HLK+ + L ++Q + Sbjct: 229 LEVWRVQSN-QVAIAARLRMRSSGREFCVATTHLKARHG--------ALLAKLRNEQGRD 279 Query: 191 LKDWITQKKESLVPFVIAGDFNRKI------------------NYLGNNDDFWKTIDPND 232 L ++ Q P ++ GDFN + Y D + + PN Sbjct: 280 LIRFVKQFAG-DTPLLLCGDFNAEPVEPIYATILGCDLLRLGSAYADVKLDREEILHPNA 338 Query: 233 SLIRFPKEKDSRCNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + F + R + + IDY + K F + Sbjct: 339 DVGEFVAKSMKREPPYTTWKIREEGEECHTIDYVFYTPDRLKIKNCLDFPAGEQIGKNRT 398 Query: 287 SRGKRLSDHCPISIDYD 303 + SDH + D++ Sbjct: 399 PSFQYPSDHFSLVCDFE 415 >gi|161078193|ref|NP_001097747.1| curled, isoform E [Drosophila melanogaster] gi|73853348|gb|AAZ86746.1| RE65127p [Drosophila melanogaster] gi|108383940|gb|ABF85759.1| IP15605p [Drosophila melanogaster] gi|158030220|gb|ABW08641.1| curled, isoform E [Drosophila melanogaster] Length = 446 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 99/317 (31%), Gaps = 39/317 (12%) Query: 16 CTAS-VAQKVRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 C+A +RL+ WNI TL +G L+ Q D++ L Sbjct: 106 CSAPVEGDDIRLLQWNILSQTLGQHNDGFVRCPEEALTWEHRKYLIVQEILQNQPDVICL 165 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE+ + + V + + + +N AI ++ +++ + Sbjct: 166 QEVDHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYKRDKLQLQGYDTRI 225 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 L S A L + +G++ V HLK+ + L ++Q + Sbjct: 226 LEVWRVQSN-QVAIAARLRMRSSGREFCVATTHLKARHG--------ALLAKLRNEQGRD 276 Query: 191 LKDWITQKKESLVPFVIAGDFNRKI------------------NYLGNNDDFWKTIDPND 232 L ++ Q P ++ GDFN + Y D + + PN Sbjct: 277 LIRFVKQFAG-DTPLLLCGDFNAEPVEPIYATILGCDLLRLGSAYADVKLDREEILHPNA 335 Query: 233 SLIRFPKEKDSRCNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + F + R + + IDY + K F + Sbjct: 336 DVGEFVAKSMKREPPYTTWKIREEGEECHTIDYVFYTPDRLKIKNCLDFPAGEQIGKNRT 395 Query: 287 SRGKRLSDHCPISIDYD 303 + SDH + D++ Sbjct: 396 PSFQYPSDHFSLVCDFE 412 >gi|148271974|ref|YP_001221535.1| putative extracellular nuclease/phosphatase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829904|emb|CAN00829.1| putative extracellular nuclease/phosphatase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 711 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 85/312 (27%), Gaps = 33/312 (10%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + V VR+ +N+ G + + + LDA +V L E+ Sbjct: 310 ASSPEVGGDVRIAGFNVLNYFTTLGERGA-ATAEELRKQRAKIVTAITGLDAQVVTLMEI 368 Query: 75 GS-----------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 + + + + R + ++I AI R V Sbjct: 369 ENSTRFGEPADTATADLVRGLNDAAGKPVWDYVRTPAELQSTPTDEIQNAIIYRTDAVTP 428 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + Q+ + D R V + V+ HLKS + + Sbjct: 429 VGQAATQI---DETVWGNAREPVAQSFRGGDRTFTVVANHLKSKSGSGTQPADGQGFFNA 485 Query: 184 -LSQQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 QA+ + + + + S + GDFN + + + + Sbjct: 486 DRVAQAKAVARFAGELEASSGSDLVYLLGDFNAYSEEDPI-----QVLRDAGFVDLVAAK 540 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG---------KR 291 +D+ + + + +I E + G R Sbjct: 541 A-PGERTYSFDGEVGSLDHVLATRAGAAAVTGVGVWDINAPEWAAREYGGAATDGSSAFR 599 Query: 292 LSDHCPISIDYD 303 SDH P+ + D Sbjct: 600 SSDHDPVKVGLD 611 >gi|19421839|gb|AAL87740.1|AF320511_1 sphingomyelinase-like protein 1 [Leptospira interrogans] Length = 648 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 42/293 (14%), Positives = 95/293 (32%), Gaps = 25/293 (8%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++++S N+ L + W N + Y K + D++ +E +A Sbjct: 179 EIKVLSHNVFMLPTN--LPRWGNWGHDERAKRISKSDYVK--NQDVIVFEEAFDTSARKI 234 Query: 83 VFPKNTWCIFYST--------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + Y T + S + ++ + + K + Y + Sbjct: 235 LLDNLREEYPYQTDVVGRTKKNWDASLGNFRSYSLVNGGVVILSKWPIEEKIQYIFNDSG 294 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 N+ V + + GKK V+ H +S +N + + Q ++++ Sbjct: 295 CGADWFANKGFVYVKINKEGKKFHVIGTHAQS-----QDQNCSNLGVPNRANQFDDIRNF 349 Query: 195 I-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN----ANK 249 I ++ +I GD N D + + P D++ N Sbjct: 350 IYSKNIPKDETVLIVGDLNVIKESNEYYDMISRLNVNEPRYVGVPFTWDAKTNEIAAYYY 409 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---LSDHCPIS 299 + +DY + ++ + + ++ + ++ G SDH PI Sbjct: 410 ENEEPVYLDYIFVSKSHAQPPVWQNLAYDPVSKHTWTVSGYTSDEFSDHYPIY 462 >gi|150017193|ref|YP_001309447.1| endonuclease/exonuclease/phosphatase [Clostridium beijerinckii NCIMB 8052] gi|149903658|gb|ABR34491.1| Endonuclease/exonuclease/phosphatase [Clostridium beijerinckii NCIMB 8052] Length = 254 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 84/284 (29%), Gaps = 38/284 (13%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R++++N+ + + R + +L+ DI+ +QE+ Sbjct: 1 MRVMTFNLR-------RDVPIDFNDRWNARRSLIYNVINEYKCDIIGVQEIKDNMLNDIK 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + I + S+R+S + + P + R Sbjct: 54 ENIEVYNIIGAPRGKKVSSERNSLLLSRN--YLIEDYKTFWLSETPDKIGSRVWYSYLPR 111 Query: 144 RAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +++ NG+++ V + HL + + LK + ++ Sbjct: 112 ICTTAILQMDNGRRVRVCNTHLDNLLPKARMYG---------------LKKILEFIEDEK 156 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP----KEKDSRCNANKNLRNKIPID 258 +P ++ GDFN + N I L +S K + ID Sbjct: 157 LPVILMGDFNDRPNSKLIKSLKEGKISSKKLLPVQDVNMGLYNESTIGNFKRSGKGLHID 216 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 Y + + + GK SDH P+ D Sbjct: 217 YIFVSEE---------IDVVNAEIIKYNVNGKYPSDHYPLMADI 251 >gi|332885531|gb|EGK05780.1| hypothetical protein HMPREF9456_02582 [Dysgonomonas mossii DSM 22836] Length = 284 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 91/311 (29%), Gaps = 37/311 (11%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M + + V L+ S + ++S+NI + + ++ W + + Sbjct: 1 MKKLFYFLAVIVLLASCNSKPIDLNVMSFNIRYDNPDDSLNNW-------QYRKDVAAKT 53 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 K+ +ADIV QE+ + S K+ Sbjct: 54 IKSQNADIVGTQEVLVNQLNDLKSRLPEYNAIGVGREDGIEKGEYSAILYKKDRFKEIKS 113 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYS 178 P + + A R A ++E + K+++ ++ HL + Sbjct: 114 GYFWLSETPEVAGSKGWDGACERIATWAILEDISSKKQLFFINTHL-----DHVGKIARQ 168 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSL 234 +LL +A L + +P ++ GDFN + + + + Sbjct: 169 EGVTLLLSRANALA--------NGLPIIMTGDFNATPESDVIKHVTDVNSPEHLIHSKDI 220 Query: 235 IRFPKEKDSRCNAN--KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 D + + + IDY + + ++ K + Sbjct: 221 AVEKSGTDWTFHGFGKVPMERREFIDYVFVSK---------GIKVAKHSVLPEKLDDIFI 271 Query: 293 SDHCPISIDYD 303 SDH + + Sbjct: 272 SDHSVVVAQIE 282 >gi|297200389|ref|ZP_06917786.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC 29083] gi|197709508|gb|EDY53542.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC 29083] Length = 275 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 44/295 (14%), Positives = 77/295 (26%), Gaps = 44/295 (14%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNAV 80 +R+V+WN+ + + + L D+V LQE+ S N Sbjct: 4 MRVVTWNLWWRFGP------------WEARQKAILAALRELRPDVVGLQEVWSAGSENLA 51 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + ++ +R + AV + + + L +D Sbjct: 52 EWLAGELGLHWAWAASPASERWQRRIGDPGVEVGNAVLSRWPVIDRAVLRLPAPEDLDD- 110 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R A + I HL S + ++ QQ L +++ + Sbjct: 111 --GRLAFHTRLAGPSYDIPFFTTHLTSAPT----------ASAIRCQQVTALAEFVATHR 158 Query: 200 ESLV-PFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSL--IRFPKEKDSRCNA 247 P VI GDFN + + P N Sbjct: 159 SGTDFPPVITGDFNAWPDSDEIRLFGGYKTAPAAPGQLFLDAWEYANPTAPSATWDPANP 218 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + IDY + + D G SDH + D Sbjct: 219 YVRMSPPARIDYIHVG---LAGPAGLGHVLKVRRAGDGPVDGVWPSDHLAVVADL 270 >gi|37526441|ref|NP_929785.1| exonuclease III [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785872|emb|CAE14923.1| Exodeoxyribonuclease III (exonuclease III) (EXO III) (AP endonuclease VI) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 268 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 39/313 (12%), Positives = 79/313 (25%), Gaps = 79/313 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + D++ LQE + Sbjct: 1 MKFISFNINGL----------------RARPHQLAAIIEQHQPDVIGLQETKVHDEAFPL 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + K + +FY H +A+ + V + Sbjct: 45 EEVGKLGYHVFYY------------GQKAHYGVALLTRQVPLAVYR-----GFPGDDEEA 87 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 RR + VE + V++ F + + Q L++++ Q Sbjct: 88 QRRVIMAEVETPHGLLTVIN-----GYFPQGENREHPVKFPAKEKFYQDLQNYLEQNLTP 142 Query: 202 LVPFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPK 239 +I GD N D + + + F Sbjct: 143 QSHVIIMGDMNISPTDLDIGIGENNQKRWLKTGKCSFLPEERDWMDR-LKNWGLVDTFRH 201 Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + + I D + Sbjct: 202 LNPECNDQFSWFDYRSKGFDDNRGLRIDLLLASKPLMDRCIATGI-------DYKIREME 254 Query: 291 RLSDHCPISIDYD 303 + SDH P+ +++ Sbjct: 255 KPSDHAPVWAEFE 267 >gi|91227580|ref|ZP_01261884.1| putative phospholipase C precursor [Vibrio alginolyticus 12G01] gi|91188473|gb|EAS74766.1| putative phospholipase C precursor [Vibrio alginolyticus 12G01] Length = 442 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 47/294 (15%), Positives = 93/294 (31%), Gaps = 42/294 (14%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---YN 78 Q ++L+++NI L+ Y L+ Q+ K D++ LQE+ + Sbjct: 176 QNLKLMTYNIWALTAIASHIGD---------RYELIPQHVKGY--DVLALQEVFASGREA 224 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + ++ + + + + +D I R V Q +P D F+ Sbjct: 225 FLRELAKEYPYQTKMLDKE------GVNIHDGGVIIVSRYPIVNEAQYVFPDCSGTDCFA 278 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + G+ V H SF + E +Q + L + Sbjct: 279 DK---GVNYAEIIKGGQAYHVFATHTASFDTDTAREYRQRQ-----FKQIRTLAQSLD-- 328 Query: 199 KESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL------ 251 S V +GDFN + G+ + + + +S + N Sbjct: 329 IPSSETVVYSGDFNVNKRKFPGDYQQMIANLSAIEPH--YSGYTESTFDPRINNFAGEAL 386 Query: 252 ---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +DY ++ ++ ++ + + LSDH P+S Sbjct: 387 SGGENVEYLDYVMVSSEYGVKSFNDNRVDVPRTTAESLWKHYNLSDHFPVSATI 440 >gi|145299881|ref|YP_001142722.1| exodeoxyribonuclease III [Aeromonas salmonicida subsp. salmonicida A449] gi|142852653|gb|ABO90974.1| exodeoxyribonuclease III [Aeromonas salmonicida subsp. salmonicida A449] Length = 268 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 78/309 (25%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKIISFNINGL----------------RARLHQLQAIIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K V Q +D+ R Sbjct: 42 -------FPLADVEAMGYHVEFHGQKAHYGVAIMSKQKPVEVQKGFPTDPEDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + I + + F + + + L+ ++ Sbjct: 90 RMIMATFKREDGSL----IKVMNGYFPQGENQDHETKFPAKQKFYENLQHYLETHHTPND 145 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 V+ GD N L ++ + + F Sbjct: 146 QLVLIGDVNISPTDLDIGIGEANRKRWLREGKCSFLPIEREWMERLKGFGLTDTFRAANP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + C + ID + + D ++ S Sbjct: 206 TECERFSWFDYRSKGFDENRGLRIDLIMASDALKD-------TVTETGIDYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWATF 267 >gi|157412901|ref|YP_001483767.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9215] gi|157387476|gb|ABV50181.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9215] Length = 281 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 91/301 (30%), Gaps = 63/301 (20%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + +WN+N + + + + ++ DI+ LQE + FP Sbjct: 3 IATWNVN----------------SIRTRLSQIIDWINQVNPDILCLQE---TKVMDDSFP 43 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + ++ + +A+ K + G + + Sbjct: 44 TEPF-------EKLGYAVEVYGQKSYNGVAIISKTKPENVKKG-FYGCTNFNQNIEIFQD 95 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + L+ + I ++++++ + L+S + Y L ++ ++++ Sbjct: 96 QKRLISADINNIKIINVYVPNGSSLESSKFKYK------INWLNCLASFLDEQEKKGELI 149 Query: 206 VIAGDFNRKINYLGNNDD-------FWKTIDPND-------SLIRFPKEKDSRCNANKNL 251 + GDFN + L +D I+ N LI + + Sbjct: 150 CLLGDFNVAPSNLDIHDPKKYEGGIMASEIERNALNNVLKKRLIDSFRIFEQNTGHWSWW 209 Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ + + L D R SDH P+ ID Sbjct: 210 DYRNNAFELNKGWRIDHIYISKELSSKLKSCVI-------DCSPRGYLRPSDHAPVMIDL 262 Query: 303 D 303 + Sbjct: 263 N 263 >gi|182417077|ref|ZP_02948455.1| endonuclease/exonuclease/phosphatase family protein [Clostridium butyricum 5521] gi|237667663|ref|ZP_04527647.1| endonuclease/exonuclease/phosphatase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379086|gb|EDT76590.1| endonuclease/exonuclease/phosphatase family protein [Clostridium butyricum 5521] gi|237656011|gb|EEP53567.1| endonuclease/exonuclease/phosphatase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 258 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 41/291 (14%), Positives = 87/291 (29%), Gaps = 46/291 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+ + R + + DI+ QE Sbjct: 1 MKVMTFNLRCDFPLD-------INNRWKNRRHITYNIIDKYKCDIIGTQEATENMYKDIK 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS-----FS 138 + + I + I ++ +N + +++ L D+ + Sbjct: 54 KNSDNYNIIGTPRSRK-------FFVERNDILIKNENKIIESKTFWLSDTPDTVGSSKWF 106 Query: 139 RAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R ++E++ K KI V + HL F + + L + I + Sbjct: 107 SVFPRICTTAVIELSNKVKIRVCNSHLDCFTS------------KAREYELKRLMELIEE 154 Query: 198 -KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA----NKNLR 252 + + +P +I GDFN + + +K N+ K Sbjct: 155 EQIKEDLPIIIMGDFNSGPDSKLIKNLSSGVYGSKKVSAVQEYDKRLYMNSTMSMFKGKE 214 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + IDY + + F GK SDH P+ + + Sbjct: 215 KGLHIDYIFVSEE---------FKVNNVEIVRYNENGKYPSDHYPLMAEIE 256 >gi|255014700|ref|ZP_05286826.1| hypothetical protein B2_12389 [Bacteroides sp. 2_1_7] Length = 279 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 90/305 (29%), Gaps = 37/305 (12%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 ++AL + +K+ ++S+NI + + + W + D+ K + Sbjct: 1 MVALFATGCLFAKNNDEKMNVMSYNIRYDNLGDKDNQW-----KFRRDFA--ADLVKFYE 53 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 AD+ QE+ + + + + K+ Sbjct: 54 ADVFGAQEVLNNQLNDLLNRLPEYAYVGVGREDGKTKGEYAPIFYRKDRFSVDKSGNFWL 113 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 K + A R A +++ GKK + L+ HL + SL Sbjct: 114 AEDINAIGKKGWDAACERVATWAILKDKNTGKKFFFLNTHL-----DHMGKVARHEGASL 168 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRFPK 239 + +QA+ L +P ++ GDFN + + + + ++ F Sbjct: 169 VLEQAKKL--------SENLPIIVTGDFNAVPSDEPIQVLTNPSDPRHLTHSRTIAGFTY 220 Query: 240 EKDSRCNAN--KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + IDY + N + + SDHCP Sbjct: 221 GPKWTFHDFGKIPYDKREWIDYIFVKGN---------IKVLRHGVLTETLNNLFPSDHCP 271 Query: 298 ISIDY 302 + Sbjct: 272 VISTL 276 >gi|269960777|ref|ZP_06175148.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269834441|gb|EEZ88529.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 442 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 91/297 (30%), Gaps = 42/297 (14%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-- 76 + Q ++L+++NI L Y L+ Y K D++ LQE+ + Sbjct: 173 ADEQNLKLMTYNIWALPAIASHIGD---------RYELIPDYVKGY--DVLALQEVFASG 221 Query: 77 -YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + ++ + + + + D I R V Q +P D Sbjct: 222 RDAFLRELAKEYPYQTKMLDKD------GFNIYDGGVIIVSRYPIVNQAQYVFPDCSGTD 275 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 F+ + G+ V H SF + E +Q + + + Sbjct: 276 CFADK---GVNYAEIIKGGQAYHVFATHTASFDTDTAREYRQRQ-----FKQMRTMAQSL 327 Query: 196 TQKKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--- 251 + V +GDFN + + G+ + + + S + N Sbjct: 328 N--IPTNETVVYSGDFNVNKLKFPGDYQQMIANLSAIEPQ--YSGYTASTFDPRINNFAG 383 Query: 252 ------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +DY ++ ++ ++ + + LSDH P+S Sbjct: 384 EALSGGENVEYLDYVMVSNEYGVKSFNDNRVDVPRSTAGSLWKHYNLSDHFPVSAVI 440 >gi|28869934|ref|NP_792553.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato str. DC3000] gi|28853179|gb|AAO56248.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato str. DC3000] Length = 270 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 80/312 (25%), Gaps = 74/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ +N + G + + R Sbjct: 41 ------QFPLADVEALGYHVHFHGQKGHYGVALLSRNPPLALHK----GFEGDDEESQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + NG+ + +++ F + + + L+ + + Sbjct: 91 FIRGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQALLEGHFSNEQ 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 P ++ GD N ++L ++ + + + F Sbjct: 146 PLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRYLYP 205 Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + + D ++ Sbjct: 206 EVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIRAAGV-------DYDLRGMEK 258 Query: 292 LSDHCPISIDYD 303 SDH PI ++ Sbjct: 259 PSDHAPIWLELS 270 >gi|145633402|ref|ZP_01789132.1| exodeoxyribonuclease III [Haemophilus influenzae 3655] gi|145635225|ref|ZP_01790929.1| exodeoxyribonuclease III [Haemophilus influenzae PittAA] gi|229845387|ref|ZP_04465518.1| exonuclease III [Haemophilus influenzae 6P18H1] gi|229846960|ref|ZP_04467066.1| exonuclease III [Haemophilus influenzae 7P49H1] gi|144985965|gb|EDJ92567.1| exodeoxyribonuclease III [Haemophilus influenzae 3655] gi|145267504|gb|EDK07504.1| exodeoxyribonuclease III [Haemophilus influenzae PittAA] gi|229810044|gb|EEP45764.1| exonuclease III [Haemophilus influenzae 7P49H1] gi|229811695|gb|EEP47393.1| exonuclease III [Haemophilus influenzae 6P18H1] gi|309972825|gb|ADO96026.1| Exodeoxyribonuclease III [Haemophilus influenzae R2846] Length = 267 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 87/311 (27%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + D++ LQE + Sbjct: 1 MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEAFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + +F+ H +A+ K + + +D+ R Sbjct: 45 EITENLGYHVFHH------------GQKGHYGVALLTKQEPKVVRRGFPTDNEDAQKR-- 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +E + V++ F + + L+ ++ ++ + Sbjct: 91 ---IIMADLETEFGLLTVIN-----GYFPQGESRAHETKFPAKEKFYADLQQYLEKEHDK 142 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 P +I GD N + L +++ + F K Sbjct: 143 SNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEERAWYQRLYDYGLEDSFRKL 202 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + ID+ ++ Q + + ++ Sbjct: 203 NPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAERCVDVGI-------ALDIRAMEK 255 Query: 292 LSDHCPISIDY 302 SDH PI ++ Sbjct: 256 PSDHAPIWAEF 266 >gi|298487202|ref|ZP_07005251.1| Exodeoxyribonuclease III [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158226|gb|EFH99297.1| Exodeoxyribonuclease III [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 270 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 82/312 (26%), Gaps = 74/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + + H +A+ +N + G + + R Sbjct: 41 ------QFPHAEVEALGYHVHFHGQKGHYGVALLSRNPPLALHK----GFEGDDEESQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + NG+ + +++ F + + + L+ + + Sbjct: 91 FIWGTCADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQTLLESHFSNEQ 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 P ++ GD N ++L ++ + + + F Sbjct: 146 PLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRHLYP 205 Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + + D ++ Sbjct: 206 EVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKAAGV-------DYDLRGMEK 258 Query: 292 LSDHCPISIDYD 303 SDH PI ++ + Sbjct: 259 PSDHAPIWLELN 270 >gi|241758932|ref|ZP_04757044.1| exodeoxyribonuclease III [Neisseria flavescens SK114] gi|241320753|gb|EER56986.1| exodeoxyribonuclease III [Neisseria flavescens SK114] Length = 256 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 88/303 (29%), Gaps = 71/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + + ADI+ LQE Sbjct: 1 MKIATWNVNSLN----------------VRLPQVQNWLADHQADILALQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ ++ + R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIISRHEPQDVH-----CGLPALPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++++ + LDS + Y Q L +++ + + Sbjct: 90 RVIAATIN----GVRVINVYCINGEALDSPKFQYKE------QWFAALTEFVRNEMAAHP 139 Query: 204 PFVIAGDFNRKINYLGNNDD--------------FWKTIDPNDSLIRFPKEKDSRCNANK 249 V+ GDFN D W + L ++ Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWFKNLLDLGLTDGLRKIHPEGAFYT 199 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ + L + D +R SDH P+ Sbjct: 200 WFDYRGAMFQRKLGLRIDHILTSPELAATLTNVTV-------DLETRAQERPSDHAPVIA 252 Query: 301 DYD 303 ++D Sbjct: 253 EFD 255 >gi|291302792|ref|YP_003514070.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] gi|290572012|gb|ADD44977.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] Length = 940 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 40/335 (11%), Positives = 89/335 (26%), Gaps = 68/335 (20%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 TA +++ + ++N+ LS ++ + + ++ D+V L+E+ Sbjct: 485 ATAQTPEQLAVATYNVENLSPKDSGGKFAALAEGIVTNLAA---------PDVVVLEEIQ 535 Query: 76 SYNA------------VAKV------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 N + K+ + + +I A Sbjct: 536 DNNGSTNDAVVDADQTLDKLTAAITAAGGPRYDW-RQISPTDDADGGQPGGNIRVAFLFN 594 Query: 118 KKNVRVLQQSY----------------------PLLGAKDSFSRAGNRRAVELLVEINGK 155 V + + P + + +R+ + NG+ Sbjct: 595 PDRVSFVDREGGDATTPVTVGTDSDGTPSLNVSPGRIDPANEAWKSSRKPLAGEFRFNGE 654 Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCS----LLSQQAQWLKDWITQKK--ESLVPFVIAG 209 K+ V+ H S + + Y P +QA+ + ++ ++ V+AG Sbjct: 655 KVIVVANHFNSKGGDQNADGRYQPPERSTEVQRIKQAKAVNAFVKDTLAVDADANVVVAG 714 Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269 D N D D+ +D+ ++ K Sbjct: 715 DINDYQFSP----ALDALTDGEVLEDLITGLPDTEQYTYVYNGISQVLDHILVSPALAKA 770 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ SDH P +F Sbjct: 771 --------DYEVVHINAEFAEQNSDHDPQVARLNF 797 >gi|331014335|gb|EGH94391.1| exonuclease III [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 270 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 81/312 (25%), Gaps = 74/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ +N + G + + R Sbjct: 41 ------QFPLADVEALGYHVHFHGQKGHYGVALLSRNPPLALHK----GFEGDDEESQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + NG+ + +++ F + + + L+ + + + Sbjct: 91 FIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQALLEGQFSNEQ 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 P ++ GD N ++L ++ + + + F Sbjct: 146 PLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRYLYP 205 Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + + D ++ Sbjct: 206 EVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKAAGV-------DYDLRGMEK 258 Query: 292 LSDHCPISIDYD 303 SDH PI ++ Sbjct: 259 PSDHAPIWLELS 270 >gi|149175215|ref|ZP_01853837.1| probable secreted protein [Planctomyces maris DSM 8797] gi|148845824|gb|EDL60165.1| probable secreted protein [Planctomyces maris DSM 8797] Length = 280 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 83/286 (29%), Gaps = 48/286 (16%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 Q +R++ +NI+ +G D + L + + D+V LQE+ Sbjct: 38 TQTLRVLCYNIHYGQGTDG-----------KYDISRLARVIQETKPDLVALQEVDVGVKR 86 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS-R 139 + + + + AV + + PL + + Sbjct: 87 SNRVHEAQRLAELTGLAVRF-GPTQHYEGGLFGNAVLTRLPILDVMIQPLPYTESTPQLV 145 Query: 140 AGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R A+ + V NGK + + H + D ++A+ + Sbjct: 146 TYPRGAIIVTVRGQNGKPLRFISTHFQHNLPAD------------RIEEAKAINGH--FT 191 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 +S +P ++AGD N + + D + + + ID Sbjct: 192 LDSDIPTILAGDMNATPEAEPIQILQKQWTNAIDD---------KATPSAPATKPRSRID 242 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 Y A +I+ + SDH PI + Sbjct: 243 YIFYRPAADFEVIETKVIDESL-----------ASDHRPIFAILKW 277 >gi|188991373|ref|YP_001903383.1| Endonuclease/exonuclease/phosphatase family protein [Xanthomonas campestris pv. campestris str. B100] gi|167733133|emb|CAP51331.1| Endonuclease/exonuclease/phosphatase family protein [Xanthomonas campestris pv. campestris] Length = 315 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 55/289 (19%), Positives = 93/289 (32%), Gaps = 36/289 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 ++ +++ LV+ N++ E + + + K L D++ LQE+ Sbjct: 55 TASAAPREMTLVTLNLHHDRED------------WPARRAYIAKELKQLAPDVIALQEVI 102 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 V + W S A+ K + Q L D Sbjct: 103 ERRG--SVENQAAWLARRLGYAYTFASVDPPGAPKRYGNALLSKRRVLAQHQRLLQPLDD 160 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R A L V+++G+ + V HL E + + + ++Q L D+I Sbjct: 161 Y------RVAAHLQVDMDGRPVNVYVTHLN--------ERSDARGAATRTRQVADLLDFI 206 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + P VIAGDFN + L D S+ R S N + Sbjct: 207 ASN-SNQAPVVIAGDFNTAADTLDLEALRKGYGDSYGSVHRNSDATVSTLNLHV-FDKPA 264 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ QN + Y + G+ SDH + + F Sbjct: 265 RIDHVFFQQNRLLAREARILFDTPY------ADGRWASDHYGVWVRLQF 307 >gi|293395887|ref|ZP_06640169.1| exodeoxyribonuclease III [Serratia odorifera DSM 4582] gi|291421824|gb|EFE95071.1| exodeoxyribonuclease III [Serratia odorifera DSM 4582] Length = 268 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 84/311 (27%), Gaps = 75/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + H +A+ K + + D+ R Sbjct: 42 FP-------LEEVSKHGYHVFYHGQKGHYGVALLTKEAPIAVRRGFPTDDDDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + +E + V++ F + ++ Q L+D++ Q+ Sbjct: 90 RIIMADLETPQGMLTVIN-----GYFPQGESRDHPVKFPAKTRFYQDLQDYLEQQLSVEN 144 Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 P +I GD N + + + ++ + + + Sbjct: 145 PVLIMGDMNISPSDYDIGIGEENRKRWLRTGKCSFLPEEREWMGRLLN-WGLVDTYRQAN 203 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 R + + ID + + D ++ Sbjct: 204 PERNDQFSWFDYRSKGFDDNRGLRIDLLLASTPLAARCVATGI-------DYQTRSMEKP 256 Query: 293 SDHCPISIDYD 303 SDH P+ ++D Sbjct: 257 SDHAPVWAEFD 267 >gi|28897872|ref|NP_797477.1| putative phospholipase C [Vibrio parahaemolyticus RIMD 2210633] gi|260361802|ref|ZP_05774827.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus K5030] gi|260877031|ref|ZP_05889386.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AN-5034] gi|28806085|dbj|BAC59361.1| putative phospholipase C precursor [Vibrio parahaemolyticus RIMD 2210633] gi|308093920|gb|EFO43615.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AN-5034] gi|308113224|gb|EFO50764.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus K5030] Length = 442 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 46/291 (15%), Positives = 88/291 (30%), Gaps = 36/291 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 Q ++L+++NI L Y L+ Y K D++ QE+ + A Sbjct: 176 QNLKLMTYNIWALPAIASHIGD---------RYELIPDYVKGY--DVLAFQEVFASGRDA 224 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + I I R V Q +P D F+ Sbjct: 225 FLRELAKEYPYQTKMLDKDGFNVYDGGVI---IVSRYPIVNEAQYVFPDCSGTDCFADK- 280 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + G+ V H SF + E QQ + + + + Sbjct: 281 --GVNYAEIIKGGQAYHVFATHTASFDTDTAREYRQRQ-----FQQMRTMAQSLN--IPN 331 Query: 202 LVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--------- 251 V +GDFN + + G+ + + + S + N Sbjct: 332 NETVVYSGDFNVNKLKFPGDYQQMIANLSAMEPQ--YSGYTASTFDPRINNFAGEALSGG 389 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +DY ++ ++ ++ + + + LSDH P+S Sbjct: 390 ENVEYLDYVMVSNEYGVKSFNDNRVDVPRSTAEGLWKHYNLSDHFPVSAVI 440 >gi|329961023|ref|ZP_08299302.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] gi|328532309|gb|EGF59113.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] Length = 348 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 101/354 (28%), Gaps = 63/354 (17%) Query: 2 IRKYVLALVFFLVPCTASVAQ----KVRLVSWNINTLSEQEGVSLWKNSV---------- 47 ++ + L +F L + Q R++ +N+ L + SL + Sbjct: 1 MKAFCLPFLFLLSTSLHAQEQADTLTFRILGYNVENLFDYRHDSLKNDYEFLPGATRHWN 60 Query: 48 -KRTTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS 102 + + + IV L E+ + + + + + I + + Sbjct: 61 YTKYKKKLDNIARAIIAAGEWNPPAIVALCEVENDSVMRDL---TCYSILKEADYRYVMT 117 Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLD 161 + I A+ ++ ++L L K + R + + ++ N + V Sbjct: 118 QSPDERGIDVALMYQRGCFKLLSSQ-SLSVEKPHKNSRPTRDILHVCGQLLNHDSLDVFV 176 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLG 219 +HL S S AQ LKD + + + +I GDFN Sbjct: 177 VHLPSRSGG------AKESEPYRLLAAQRLKDAVDSLYKVRNRAQILIMGDFNDYPANKS 230 Query: 220 NNDDFWKT--------IDPNDSLIRFPKEKDSR--CNANKNLRNKIPIDYFVMDQNAYKF 269 ++P+ + +R + K +D+ ++ N + Sbjct: 231 VRQILKAEVPSSVSGSLNPHRLYHLLAGKAAARKHFGSYKYQGEWGLLDHIIVSGNLLQA 290 Query: 270 LIQESFSEI---------------------LYNEDDIKSRGKRLSDHCPISIDY 302 S E + SDH P+ D+ Sbjct: 291 GSPLSADEKRADVFSLPFLLTEDPNYGGKQPFRTYYGMKYQAGYSDHLPVWADF 344 >gi|301632179|ref|XP_002945168.1| PREDICTED: exodeoxyribonuclease III-like [Xenopus (Silurana) tropicalis] Length = 263 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 90/303 (29%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WNIN+L+ + + D + LQE+ Sbjct: 1 MRITTWNINSLA----------------VRLPQVLDWLAANPVDALALQEL---KLTDDK 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + + +A+ + + G D +R Sbjct: 42 FPADAFAA-------AGYRAVVFGQKTYNGVAILSRYPMTDVVRN-IPGFADEQAR---- 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ + +++ + + S + Y + Q L+DW+ + Sbjct: 90 -VIAATLDTPTGPLRLVNGYFVNGQAPGSDKFAYK------MRWLQALQDWLRSELALHP 142 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 + GDFN ++D ++ + + F + + Sbjct: 143 RLALVGDFNVAPEDRDSHDPEGLRETIHHTTQERLHFQALLGLGLVDAF-RLFVQPEKSF 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ++ ID+ ++ Q + + D + + K+ SDH P+ Sbjct: 202 SWWDYRMLGFQKNRGLRIDHILVSQMLAPLVSACAV-------DRLPRKNKQPSDHAPVV 254 Query: 300 IDY 302 + Sbjct: 255 VTL 257 >gi|171913306|ref|ZP_02928776.1| hypothetical protein VspiD_19040 [Verrucomicrobium spinosum DSM 4136] Length = 299 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 29/295 (9%), Positives = 69/295 (23%), Gaps = 34/295 (11%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + ++NI + ++G + ++ + D++ +QE + Sbjct: 22 VGTFNIRYDNPRDGENGNG-----WLQRAPVVASLIRFHRFDVLGIQEALHHQVEDLQRH 76 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + + + + K + P L + NR Sbjct: 77 LPAYAHAGCGRDDGHEAGEFAAIFYRKDVFTLKDSGTFWLSPTPELP-SIGWDAKFNRIC 135 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + +E N + + F L+ + + + P Sbjct: 136 TWVKLESNKTHETLYVFNTH---FDHHGTTARLEGARLILAKIREIA--------GGRPT 184 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK--NLRNKIPIDYFVMD 263 V+ GDFN + + + ID+ Sbjct: 185 VLTGDFNVDQTSESYRRIHDSQFLADGFETAEERYALNGTANGFKVTAYTDRRIDHIFHT 244 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRG---------------KRLSDHCPISIDYD 303 + D G + SDH P+ ++ + Sbjct: 245 RGFKVLRYGVLTDSYRSPSGDAAETGSVAFPREMKFRNYLPRTPSDHFPVLVELE 299 >gi|299134949|ref|ZP_07028140.1| exodeoxyribonuclease III [Afipia sp. 1NLS2] gi|298589926|gb|EFI50130.1| exodeoxyribonuclease III [Afipia sp. 1NLS2] Length = 260 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 92/305 (30%), Gaps = 69/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N L + K + D+V LQE+ + + Sbjct: 1 MRIATWNVN----------------SVRQRLDHLLTWLKEREPDLVCLQEI---KCLDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + ++ +A+ K + +D +R Sbjct: 42 FPRE-------PIEALGYNVVTHGQKTFNGVALLSKYRFEETRPQLAGDPEDLHARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E +V + ++L + +++ + Y + L ++ ++ +S Sbjct: 92 --LEGVVSHKDGTFRLACLYLPNGNPVNTEKYPYK------LRWMDRLIEYARERLKSEE 143 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP---------------NDSLIRFPKEKDSRCNAN 248 PFV+AGDFN + ++ N L + Sbjct: 144 PFVLAGDFNVIPTPADVYNP-QAWLEDALFLPQTRDKFQTLLNLGLTDAFRATSDAPRQY 202 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ +M A L D ++ SDH P+ Sbjct: 203 TFWDYQAGAWQKNNGIRIDHLLMSPPASDRLKAAGI-------DKHVRGWEKASDHVPVW 255 Query: 300 IDYDF 304 D DF Sbjct: 256 ADLDF 260 >gi|150390789|ref|YP_001320838.1| endonuclease/exonuclease/phosphatase [Alkaliphilus metalliredigens QYMF] gi|149950651|gb|ABR49179.1| Endonuclease/exonuclease/phosphatase [Alkaliphilus metalliredigens QYMF] Length = 379 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 34/277 (12%), Positives = 79/277 (28%), Gaps = 54/277 (19%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++R++S+NI+ + + K A+++ LQE+ + Sbjct: 150 KRLRIMSYNIH-----------IGRDLFGRYSLDQIAEVIKESRAEVIGLQEVDQHFIRT 198 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K + + + + AV + ++ + + Sbjct: 199 KFQDQIKYLSEELGM-NYAYGPNLNIVGAKYGNAVLSVHPIEDYENVMIPSGR------E 251 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R ++ +++ G+ + HL + Q + ++ I + Sbjct: 252 SRGLLKTTIDVEGQLVDFFVTHLGL-------------NQKERMGQVKVIEQQIDMAQN- 297 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 P ++ GDFN + + L + + IDY Sbjct: 298 --PVILVGDFNARPHSQEIQKL------SRGLLDVGKRMGYNDTPTFDLPVLSGRIDYIF 349 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +DQ + R SDH P+ Sbjct: 350 VDQQM--------------EILTYRVIKSRASDHYPV 372 >gi|251789807|ref|YP_003004528.1| exodeoxyribonuclease III [Dickeya zeae Ech1591] gi|247538428|gb|ACT07049.1| exodeoxyribonuclease III [Dickeya zeae Ech1591] Length = 268 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 80/310 (25%), Gaps = 73/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + F + H +A+ K + + D+ R Sbjct: 42 FPLDEVKQF-------GYHVFYHGQKGHYGVALLTKAEPLAVRRGFPTDDDDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + ++ Q L+ ++ Q +S Sbjct: 90 RIIMADLATPLGTLTVVN-----GYFPQGESRDHPVKFPAKTRFYQDLQHYLEQHHQSEQ 144 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N ++ + + + F Sbjct: 145 PVLIMGDMNISPADQDIGIGEENRKRWLRTGKCSFLPEEREWMERLKNWGLVDTFRAANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + D ++ S Sbjct: 205 ECQDRFSWFDYRSAGFDDNRGLRIDLIMATPPLASRCAATGI-------DYAIRGMEKPS 257 Query: 294 DHCPISIDYD 303 DH P+ ++ Sbjct: 258 DHAPVWAEFT 267 >gi|194366452|ref|YP_002029062.1| endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia R551-3] gi|194349256|gb|ACF52379.1| Endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia R551-3] Length = 297 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 90/286 (31%), Gaps = 36/286 (12%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + + +V++N++ E S + K L D + LQE+ Sbjct: 44 APGMSMSMVTFNLHHDRED------------WPSRRRSIVAELKRLQPDAIALQEVIQRR 91 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + W + S A+ + + + + LL D Sbjct: 92 TLR---NQAQWLASQLGYTYLFVSTDPVGAPKRYGNALLTRRPVLARNDHLLLPLDDY-- 146 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R L ++++G+ + V HL E + + Q + L +IT Sbjct: 147 ----RTVAHLRIDVDGRPVNVYATHLN--------ERSDESGQRIRRTQVEDLLRFITAT 194 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + P VIAGDFN ++ ++ + D S+ + ID Sbjct: 195 SAA-APVVIAGDFNALVDAGDLSELRSRYGDSYGSVHVNTDLAGVSTLNRHYYQAPSRID 253 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + Q+ ++ + DD G+ SDH + F Sbjct: 254 HIFFQQD---EMVAREAKILFDQPDDS---GRWASDHYGVWTRLQF 293 >gi|304410511|ref|ZP_07392129.1| conserved hypothetical protein [Shewanella baltica OS183] gi|307304604|ref|ZP_07584354.1| conserved hypothetical protein [Shewanella baltica BA175] gi|304350995|gb|EFM15395.1| conserved hypothetical protein [Shewanella baltica OS183] gi|306912006|gb|EFN42430.1| conserved hypothetical protein [Shewanella baltica BA175] Length = 870 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 48/378 (12%), Positives = 103/378 (27%), Gaps = 88/378 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQ-EGVSLWKNSVKRTTSDYT-------LLRQYAKNLDA 66 + + +R+ S+N+ +G + R + ++A Sbjct: 455 APSVATKGDLRVASFNVLNFFNDVDGGDTNPSGSNRGALTLEEMVLQRTKIVSAITAMNA 514 Query: 67 DIVFLQEMGSYNAVAKVF-------------PKNTWCIFYSTERLINHSKRDSNNDIHTA 113 DIV L E+ + K P+N + T+ K + I Sbjct: 515 DIVGLMEIANNGFGEKSAIKNLVDALNEKQTPENAYSFVEITDADKYDGKYFGTDAITVG 574 Query: 114 IAVRKKNVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155 + R V + + ++ + + A R ++ +I+ + Sbjct: 575 MLYRGGKVTLAGAAQAIDTPEQHASAGSVTRTKDGKTETNPGNDAYQRHSLAQTFKIHDE 634 Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES--- 201 + V+ HLKS + + A+ L + + K Sbjct: 635 SLTVVVNHLKSKGSGCLEDWANFEESVDPADQQGKCNAFRVSAAKVLGETLKDVKGDLLI 694 Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPK 239 P + DF+ + W T+D + K Sbjct: 695 IGDMNAYGMEDPIRVLTDFDASKSDRDIMTASWTTLDGKVFERQGSKIEKGYGLINLNTK 754 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291 + + +D+ + + + K L+ I E ++ GK+ Sbjct: 755 AHGAGTYSYSYNGELGNLDHALANASLAKRLVDIEDWHINSVESNLFEYGKKFSGDLAKS 814 Query: 292 -----LSDHCPISIDYDF 304 SDH P+ + + Sbjct: 815 ENAFSASDHDPVIVALSY 832 >gi|153001981|ref|YP_001367662.1| endonuclease/exonuclease/phosphatase [Shewanella baltica OS185] gi|151366599|gb|ABS09599.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS185] Length = 870 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 48/378 (12%), Positives = 103/378 (27%), Gaps = 88/378 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQ-EGVSLWKNSVKRTTSDYT-------LLRQYAKNLDA 66 + + +R+ S+N+ +G + R + ++A Sbjct: 455 APSVATKGDLRVASFNVLNFFNDVDGGDTNPSGSNRGALTLEEMVLQRTKIVSAITAMNA 514 Query: 67 DIVFLQEMGSYNAVAKVF-------------PKNTWCIFYSTERLINHSKRDSNNDIHTA 113 DIV L E+ + K P+N + T+ K + I Sbjct: 515 DIVGLMEIANNGFGEKSAIKNLVDALNEKQTPENAYSFVEITDADKYDGKYFGTDAITVG 574 Query: 114 IAVRKKNVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155 + R V + + ++ + + A R ++ +I+ + Sbjct: 575 MLYRGGKVTLAGAAQAIDTPEQHASAGSVTRTKDGKTETNPGNDAYQRHSLAQTFKIHDE 634 Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES--- 201 + V+ HLKS + + A+ L + + K Sbjct: 635 SLTVVVNHLKSKGSGCLEDWANFEESVDPADQQGKCNAFRVSAAKVLGETLKDVKGDLLI 694 Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPK 239 P + DF+ + W T+D + K Sbjct: 695 IGDMNAYGMEDPIRVLTDFDASKSDRDIMTASWTTLDGKVFERQGSKIEKGYGLINLNTK 754 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291 + + +D+ + + + K L+ I E ++ GK+ Sbjct: 755 AHGAGTYSYSYNGELGNLDHALANASLAKRLVDIEDWHINSVESNLFEYGKKFSGDLAKS 814 Query: 292 -----LSDHCPISIDYDF 304 SDH P+ + + Sbjct: 815 ENAFSASDHDPVIVALSY 832 >gi|251792404|ref|YP_003007130.1| exonuclease III [Aggregatibacter aphrophilus NJ8700] gi|247533797|gb|ACS97043.1| exodeoxyribonuclease III [Aggregatibacter aphrophilus NJ8700] Length = 267 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 33/311 (10%), Positives = 88/311 (28%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++S+NIN L + L + D++ LQE + Sbjct: 1 MKVMSFNINGL----------------RARPHQLEEIIDKYQPDVLGLQEIKVADEVFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + + + H +A+ K + + +++ R Sbjct: 45 ELVDHLGYHVNHY------------GQKGHYGVALLSKQAPLSVKKGFPTDGEEAQKR-- 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + +E ++ V++ F + + L+ ++ Q+ + Sbjct: 91 ---IIMIDLETPFGQLTVIN-----GYFPQGESRKHPTKFPAKQKFYADLQRYLEQEHNA 142 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 P +I GD N + L ++++ + F Sbjct: 143 ENPVIIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEEREWYQRLYAYGLEDTFRYM 202 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + ID+ + ++ + ++ Sbjct: 203 NPTVNDKFSWFDYRSKGFDDNRGLRIDHILANKALVAHCVDTGI-------ALDIRAMEK 255 Query: 292 LSDHCPISIDY 302 SDH PI ++ Sbjct: 256 PSDHAPIWAEF 266 >gi|296133066|ref|YP_003640313.1| Endonuclease/exonuclease/phosphatase [Thermincola sp. JR] gi|296031644|gb|ADG82412.1| Endonuclease/exonuclease/phosphatase [Thermincola potens JR] Length = 224 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 34/280 (12%), Positives = 76/280 (27%), Gaps = 59/280 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R++++N+++ + + IV L E+ + Sbjct: 3 IRVMTYNVHSC-----------IGLSKKDSLPQINNLFEVYKPSIVGLNEVEKMSPRTLF 51 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + A+ K + + L + R Sbjct: 52 VDQAKKLAQNWFPYYVFGPAIKIGPFGFFGNAILSKFPIIAWECIKLHS------KIEFR 105 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ +++ G ++ V+ HL Q + L I Sbjct: 106 ACIKARIQLPGTELTVVVTHLGLNK-------------EERVGQIETLAGLIR---GERT 149 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 P ++ GDFN + L + + + N + IDY ++ Sbjct: 150 PVILMGDFNAFTDELRPLEGLVRDLGVNSGPTFPADNPTA------------RIDYILVS 197 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +N ++ S I + SDH P+ + Sbjct: 198 EN----IVDYSLEVINSD----------ASDHLPVLATLE 223 >gi|145629100|ref|ZP_01784899.1| exodeoxyribonuclease III [Haemophilus influenzae 22.1-21] gi|145639670|ref|ZP_01795273.1| exodeoxyribonuclease III [Haemophilus influenzae PittII] gi|144978603|gb|EDJ88326.1| exodeoxyribonuclease III [Haemophilus influenzae 22.1-21] gi|145271227|gb|EDK11141.1| exodeoxyribonuclease III [Haemophilus influenzae PittII] gi|309750640|gb|ADO80624.1| Exodeoxyribonuclease III [Haemophilus influenzae R2866] Length = 267 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 87/311 (27%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + D++ LQE + Sbjct: 1 MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEAFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + +F+ H +A+ K + + +D+ R Sbjct: 45 EITENLGYHVFHH------------GQKGHYGVALLTKQKPKVVRRGFPTDNEDAQKR-- 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +E + V++ F + + L+ ++ ++ + Sbjct: 91 ---IIMADLETEFGLLTVIN-----GYFPQGESRAHETKFPAKEKFYADLQQYLEKEHDK 142 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 P +I GD N + L +++ + F K Sbjct: 143 SNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEERAWYQRLYDYGLEDSFRKL 202 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + ID+ ++ Q + + ++ Sbjct: 203 NPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAERCVDVGI-------ALDIRAMEK 255 Query: 292 LSDHCPISIDY 302 SDH PI ++ Sbjct: 256 PSDHAPIWAEF 266 >gi|255322370|ref|ZP_05363516.1| putative endonuclease/exonuclease/phosphatase [Campylobacter showae RM3277] gi|255300743|gb|EET80014.1| putative endonuclease/exonuclease/phosphatase [Campylobacter showae RM3277] Length = 445 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 41/292 (14%), Positives = 98/292 (33%), Gaps = 55/292 (18%) Query: 23 KVRLVSWNINTLSE--QEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQE 73 ++++ ++N L + +G V ++ + + + K L+ADI+ LQE Sbjct: 26 ELKIATFNAQNLFDAKNDGSEYNDFVVGKSEWNEKKASAKFKAVSAKIKELNADIIALQE 85 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + + ++ + F ++ +AV + P Sbjct: 86 IENEMILKELMKDAGYKYFAFSKDKNGP----------VGLAVLSRIK-------PEKTQ 128 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 S R ++L E++G+K +L++H + +Q + Sbjct: 129 IFSVPNVKTRDILKLDFEVDGQKFSLLNLHFPARKNP--------------LKQRKTAFI 174 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 + V+ GDFN D + + + + PK + + + Sbjct: 175 TLKSTLIDAEKVVVLGDFNTPYGDKELLGDLATSKNLANLWVFLPK------HERYSHTS 228 Query: 254 KIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +D+ ++ ++ + + SF G ++SDH + +F Sbjct: 229 LNALDHVLLSKDALSQNYVLNSFKIE--------RDGAQISDHFALVFRLNF 272 >gi|332827055|gb|EGJ99843.1| hypothetical protein HMPREF9455_00267 [Dysgonomonas gadei ATCC BAA-286] Length = 285 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 96/312 (30%), Gaps = 38/312 (12%) Query: 1 MIRKY-VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 M R + + A+V LV CT S + ++S+NI + + ++ W + D Q Sbjct: 1 MKRLFYLFAVVSLLVSCTRSKPLDLNVMSFNIRYDNPGDSLNSW-----QYRKDIA--AQ 53 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 K +ADIV QE+ + K Sbjct: 54 TIKAQNADIVGAQEVLVNQLNDLKASLPEYNAIGIGRIDGIEKGEYCAILYKKDRFKEIK 113 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTY 177 + P + + A R A +++E + K+I+ ++ HL + Sbjct: 114 SGHFWLSETPEVIGSKGWDGACERVATWIVLEEISSKKQIFFINTHL-----DHVGKMAR 168 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDS 233 +LL Q+ L +P ++ GDFN + + Sbjct: 169 QEGVTLLLQRIGEL--------SKGLPVILTGDFNATPDSDVIKHVTDPANPNYLMHTKD 220 Query: 234 LIRFPKEKDSRCNAN--KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + L + IDY + + + + + K Sbjct: 221 IAVVKSGTNWTFHGFGQVPLEKREFIDYIFVKPDT---------KVLKHTVIPEELDSKF 271 Query: 292 LSDHCPISIDYD 303 +SDH I+ + Sbjct: 272 ISDHSAITAQIE 283 >gi|315659955|ref|ZP_07912813.1| sphingomyelin phosphodiesterase [Staphylococcus lugdunensis M23590] gi|315494856|gb|EFU83193.1| sphingomyelin phosphodiesterase [Staphylococcus lugdunensis M23590] Length = 329 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 106/326 (32%), Gaps = 37/326 (11%) Query: 1 MIRKYVLALVFFLVPCTASVA------QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54 +I V+ F LV + + A +++ + N+ L +++ N + +D Sbjct: 11 IITTIVVLSSFLLVFSSITYASERNTEDSLKITTHNVYFLPT----AIYPNWGQSQRADL 66 Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-- 112 Y + D+V L E+ + A ++ Y T + ++ Sbjct: 67 ISKADYIQGQ--DVVILNELFDHKASNRLLTNLKSQYPYQTPIVGQGTEGWQKTSGSYRK 124 Query: 113 ------AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 + + K V Q+ + + S GN+ + + NGK ++ HL++ Sbjct: 125 LKKVSGGVGIVSKWPIVQQEQHIYKNGCGADS-VGNKGFAYIKINKNGKYQHIIGTHLQA 183 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 + ++ Q + +K +I + P I GD N Sbjct: 184 ----EDPVCMKGKDQTIRQSQMEEIKQFIKDKNIPKDEPVYIGGDLNVIKGSAEYQKMSD 239 Query: 226 KTIDP-----NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 + + + + N N +DY ++D++ + + + + Sbjct: 240 NLNVSMPKQYEGNAYSWDTQTNGIANYNYPKLEPQHLDYILLDRDHAQPSSWHNHTHKVK 299 Query: 281 NEDDIKSRGKR------LSDHCPISI 300 + + + SDH P+S Sbjct: 300 SPEWSVKSWGKTYRYNDYSDHYPVSA 325 >gi|291441116|ref|ZP_06580506.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291344011|gb|EFE70967.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 331 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 85/307 (27%), Gaps = 40/307 (13%) Query: 7 LALVFFLVPCTASVAQ-----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 L L +P A+ A+ + ++S+N+ S E ++R Sbjct: 52 LPLASTALPPGAASAKERPDRPLEVMSFNLRFASAAE--------PHSWAVRRPVMRDLL 103 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + ++ QE + T R + T V + Sbjct: 104 RRERPHVIGTQEGLYPQLRDIEADLGPAYDWIGTGREGGSRDEFTAVLYDTQRLVPLEYD 163 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVE---INGKKIWVLDIHLKSFCFLDSLENTYS 178 P + A +++ A R A + G++ VL+ HL + Sbjct: 164 HFWLSDTPDVIASNTWGNAFVRMATRVRFRDLRAGGREFHVLNTHLDN------------ 211 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW-KTIDPNDSLIRF 237 + ++A L VP V+ GDFN + D + Sbjct: 212 -ASQYARERAAALIADRVGGLGRCVPVVVTGDFNVAAHENPVYDTLLGAGLVDTWEAAAE 270 Query: 238 PKEKDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 E + + ID+ ++ + + + G+ SDH Sbjct: 271 RGEPYGTFHGYRPPVPGGPRIDWILVTP---------GVTVHRASVNTFAPAGRFPSDHL 321 Query: 297 PISIDYD 303 P+ Sbjct: 322 PVQAALT 328 >gi|255013349|ref|ZP_05285475.1| hypothetical protein B2_05535 [Bacteroides sp. 2_1_7] gi|298376689|ref|ZP_06986644.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] gi|298266567|gb|EFI08225.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] Length = 281 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 34/311 (10%), Positives = 85/311 (27%), Gaps = 38/311 (12%) Query: 2 IRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 ++K ++ + + A+ +++ ++N+ + +G + W + ++ Sbjct: 1 MKKLIIFVSLLFLAMAYGKAEDKEVLKIATFNLRMDTPSDGENAWFHRK-------DMVN 53 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + D+ QE ++ + + + + + + Sbjct: 54 DLIRFYGFDLFGTQEGFTHQ-LNDILRLSDYRFIGVGRDDGKDAGEHCAIFYRSDRFKVL 112 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENT 176 +P + NR E N K+ + ++H + + Sbjct: 113 DQGDFWLSEHPEKPGRGWDGTCCNRICTWGKFEDLKNHKQFYFFNVHYEY-----EGDVA 167 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 S +L+ + + + P + GDFN + I Sbjct: 168 RRESSNLMISRIKSIA--------GNQPVFLTGDFNAFPTEEPIRILNDSGFLNDSYKIT 219 Query: 237 FPKEKDSRCNANKNLRN---KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 C + + +DY + S Y G S Sbjct: 220 KEAPFGPVCTYHGYDSTIKTEERLDYIWVTD---------SIQIDKYGVLTNTLYGHTPS 270 Query: 294 DHCPISIDYDF 304 DH P+ + +F Sbjct: 271 DHFPVMVVAEF 281 >gi|160876701|ref|YP_001556017.1| endonuclease/exonuclease/phosphatase [Shewanella baltica OS195] gi|160862223|gb|ABX50757.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS195] gi|315268901|gb|ADT95754.1| conserved hypothetical protein [Shewanella baltica OS678] Length = 870 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 48/378 (12%), Positives = 104/378 (27%), Gaps = 88/378 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQ-EGVSLWKNSVKRTTSDYT-------LLRQYAKNLDA 66 + + +R+ S+N+ +G + + R + ++A Sbjct: 455 APSVATKGDLRVASFNVLNFFNDVDGGDINPSGSNRGALTLEEMVLQRTKIVSAITAMNA 514 Query: 67 DIVFLQEMGSYNAVAKVF-------------PKNTWCIFYSTERLINHSKRDSNNDIHTA 113 DIV L E+ + K P+N + T+ K + I Sbjct: 515 DIVGLMEIANNGFGEKSAIKNLVDALNEKQTPENAYSFVEITDADKYDGKYFGTDAITVG 574 Query: 114 IAVRKKNVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155 + R V + + ++ + + A R ++ +I+ + Sbjct: 575 MLYRGGKVTLAGAAQAIDTPEQHASAGSVTRTKDGKTETNPGNDAYQRHSLAQTFKIHDE 634 Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES--- 201 + V+ HLKS + + A+ L + + K Sbjct: 635 SLTVVVNHLKSKGSGCLEDWANFEESVDPADQQGKCNAFRVSAAKVLGETLKDVKGDLLI 694 Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPK 239 P + DF+ + W T+D + K Sbjct: 695 IGDMNAYGMEDPIRVLTDFDASKSDRDIMTASWTTLDGKVFERQGSKIEKGYGLINLNTK 754 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291 + + +D+ + + + K L+ I E ++ GK+ Sbjct: 755 AHGAGTYSYSYNGELGNLDHALANASLAKRLVDIEDWHINSVESNLFEYGKKFSGDLAKS 814 Query: 292 -----LSDHCPISIDYDF 304 SDH P+ + + Sbjct: 815 ENAFSASDHDPVIVALSY 832 >gi|119773257|ref|YP_925997.1| phospholipase C [Shewanella amazonensis SB2B] gi|119765757|gb|ABL98327.1| Phospholipase C [Shewanella amazonensis SB2B] Length = 334 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 42/345 (12%), Positives = 113/345 (32%), Gaps = 53/345 (15%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M + + L + + A+ ++++++NI L+ Q+ N R + T L + Sbjct: 1 MRKHHALLITLIFALQPQAYAESLKVMAYNIMQLNVQDWDQA--NRAARLPAALTQLSE- 57 Query: 61 AKNLDADIVFLQEMGSYN---AVAKVFPKNTWCIFYSTERLINHSKRD-------SNNDI 110 D++ + E + A++ + + E S + Sbjct: 58 ----QPDVILVSEAFNDEAETALSSLASLYPYQTANVGENCSGADWDALTGSCSNSPMVV 113 Query: 111 HTAIAVRKKNVRVLQQSYPL-LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 + + K ++++++ + S+ N+ + +E NG++ ++ HL++ Sbjct: 114 RGGVVILSKYPILVRKAHVFNHSLQGSWDDYANKGFAYVAIEKNGERFHLIGTHLQATHD 173 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 D+ + + Q ++ +I ++ + +I GD N + + D T+ Sbjct: 174 DDT-----AQEHQVRLGQLGEIQAFIEAEQIPANEAVIIGGDMNVEWSKQQEVTDMLATV 228 Query: 229 DPNDSLIRF---------PKEKDSRCNANKNL-RNKIPIDYFVMDQNAYK---------- 268 + + + +DY Q+ + Sbjct: 229 NAGLNFSTPVTGSFSARDNWFTKANAYYFDYSLDYNDTLDYVFWHQDHKQPANNPEMAVR 288 Query: 269 ---------FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + + LSDH P+ ++++F Sbjct: 289 YPKAQISWYWWYLKGYWNLSSGRYYHNGYYNELSDHYPVQVNFEF 333 >gi|322420097|ref|YP_004199320.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M18] gi|320126484|gb|ADW14044.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M18] Length = 246 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 88/286 (30%), Gaps = 46/286 (16%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + ++++N+++ + + + +ADIV LQE+ + Sbjct: 2 SMTFSVMTYNVHSCIGTDRKLSP-----------LRIAEVIDRCNADIVALQELDAGLPR 50 Query: 81 AKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 ++ + HS A+ R + + P SF R Sbjct: 51 TQMTDQAHLIALTLEMSFHFHSSIHMMEGGYGNAVLSRGDVRLIKAGAIPADPLHPSFER 110 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL--KDWITQ 197 R AV + VE+ G KI VL H QA+ + +W+ + Sbjct: 111 ---RGAVWVEVELGGHKIQVLATHFGLNRG-------------ERVSQARAVTGHEWL-E 153 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 E P ++ GDFN ++ + + ++ + + I Sbjct: 154 HPECRHPAILCGDFNATAGSY-----VYRLLTRHMHDVQRGLKGRLPRGTWPAQFPFMRI 208 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D+ + ++ + + + SDH P+ + Sbjct: 209 DHLLASRDLKVRSVSVPRTPLTRV----------ASDHLPLVATLE 244 >gi|269957862|ref|YP_003327651.1| 5'-Nucleotidase domain-containing protein [Xylanimonas cellulosilytica DSM 15894] gi|269306543|gb|ACZ32093.1| 5'-Nucleotidase domain protein [Xylanimonas cellulosilytica DSM 15894] Length = 1577 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 100/348 (28%), Gaps = 66/348 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGV------------------SLWKNSVKRTTSDY--- 54 +V +R+ ++N+ GV + N+ R D Sbjct: 488 APEAVGGDLRVATFNVLNYFTTLGVDFGGCSYFADRDGNPIAVNSCPNNGPRGAWDAASL 547 Query: 55 ----TLLRQYAKNLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHS 102 + LD D+V L E+ + A+A + + S Sbjct: 548 QRQQDKIVAAVNALDVDVVGLLEIENSAALGEEPDEALATLTDALNADAGGDVWAYVPSS 607 Query: 103 KRDSN----NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN-RRAVELLVEI--NGK 155 + + I AI R+ V + ++ L + GN R + G Sbjct: 608 AELPDASEQDAITNAIIYRQAVVEPVGEARALGDQSAAGQAFGNAREPIGQEFAPAGGGD 667 Query: 156 KIWVLDIHLKS-----FCFLDSLENTYSPSCSL-LSQQAQWLKDWITQKKESLVPFVIAG 209 +V+ HLKS D+ + + +QA L+DW+ + E + G Sbjct: 668 PFFVVVNHLKSKGSAGPWPGDADAGDGQGASNESRVRQATALRDWVDEVTEPGEAVALIG 727 Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269 DFN + + + + + +D+ +++ A + Sbjct: 728 DFNAYTHEDP-----LQVLYDAGYTDAASTLSSDQ-WSYSFGGLSGSLDHVLLNGPATER 781 Query: 270 LIQESFSEILYNEDDIKSRGKR--------------LSDHCPISIDYD 303 EI +E + SDH P+ + Sbjct: 782 ATGADVWEINADESIALQYSRYNYHGTLFHAPDQFASSDHNPVVVGLT 829 >gi|148827197|ref|YP_001291950.1| exonuclease III [Haemophilus influenzae PittGG] gi|148718439|gb|ABQ99566.1| exodeoxyribonuclease III [Haemophilus influenzae PittGG] Length = 267 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 86/311 (27%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + D++ LQE + Sbjct: 1 MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEAFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + +F+ H +A+ K + + +D+ R Sbjct: 45 EITENLGYHVFHH------------GQKGHYGVALLTKQEPKVVRRGFPTDNEDAQKR-- 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +E + V++ F + + L+ ++ ++ + Sbjct: 91 ---IIMADLETEFGLLTVIN-----GYFPQGESRAHETKFPAKEKFYADLQQYLEKEHDK 142 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 P +I GD N + L +++ + F Sbjct: 143 SNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEERAWYQRLYDYGLEDSFRNL 202 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + ID+ ++ Q + + ++ Sbjct: 203 NPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAERCVDVGI-------ALDIRAMEK 255 Query: 292 LSDHCPISIDY 302 SDH PI ++ Sbjct: 256 PSDHAPIWAEF 266 >gi|298370009|ref|ZP_06981325.1| exodeoxyribonuclease III [Neisseria sp. oral taxon 014 str. F0314] gi|298281469|gb|EFI22958.1| exodeoxyribonuclease III [Neisseria sp. oral taxon 014 str. F0314] Length = 256 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 86/304 (28%), Gaps = 73/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + + DI+ LQE Sbjct: 1 MKITTWNVNSLN----------------VRLPQVQNWLADHQPDILVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ ++ + + R Sbjct: 35 LKLDQDKFPAAALQMMGWHSVWSGQKTYNGVAIISRSEPQDVHT-----GLPAMPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++++ + DS + Y Q L +++ + Sbjct: 90 RVIAATI----GGVRVINVYCVNGEAPDSPKFQYKQ------QWFAALTEFVRDEMARYE 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D ++K + K Sbjct: 140 KLVLLGDFNIAPTDDDCYDAEKWRGKILCTDSERGWFKNLLDLGLTDSLRKIHPEGAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ L D +R SDH P+ Sbjct: 199 TWFDYRGAMFQRGLGLRIDHLLVSPALSAVLKDVQV-------DSDARAQERPSDHAPVW 251 Query: 300 IDYD 303 ++D Sbjct: 252 AEFD 255 >gi|293368736|ref|ZP_06615341.1| Ser/Thr phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|298480109|ref|ZP_06998308.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. D22] gi|292636201|gb|EFF54688.1| Ser/Thr phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|298273918|gb|EFI15480.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. D22] Length = 611 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 80/304 (26%), Gaps = 63/304 (20%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K L + L +RL+++NI + + + + + Sbjct: 4 MKKIFLLISVILFIFPVQAQHTLRLMTYNIKNANGMDDICS-----------FQRVANVI 52 Query: 62 KNLDADIVFLQEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N D+V +QE+ S + V + I + Sbjct: 53 NNASPDVVAIQEVDSMTRRSGQKYVLGEIAERTQMHACFAPAIE----FEGGKYGIGLLT 108 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K V + Q+ PL G R R + E HL Sbjct: 109 KQVPLRLQTIPLPG------REEARTLILAEFE----DYIYCCTHLSLTEGD-------- 150 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + +K I K+ P +AGD N + + F Sbjct: 151 -----RMKSLEIVKSLIASYKK---PLFLAGDMNAEPESDFIK----------ELQKDFQ 192 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + K IDY + + S + SDH PI Sbjct: 193 ILSNPEKHTYPAPDPKEAIDYIAVSKQNATGFAVISAKVVN---------ELMASDHRPI 243 Query: 299 SIDY 302 ++ Sbjct: 244 LVEL 247 >gi|311105771|ref|YP_003978624.1| exodeoxyribonuclease III 1 [Achromobacter xylosoxidans A8] gi|310760460|gb|ADP15909.1| exodeoxyribonuclease III 1 [Achromobacter xylosoxidans A8] Length = 260 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 32/306 (10%), Positives = 81/306 (26%), Gaps = 72/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N+L+ + + D++ +QE+ + Sbjct: 1 MKLATWNVNSLN----------------VRLPQVLDWLAANPVDVLCIQELKLTDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ + + Sbjct: 41 ------KFPEAAFTEAGYHAVWAGQKTYNGVAIISRVPGTSMVRNI------PGYEDPQQ 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + L + V+ + + + S + Y + ++ W+ + + Sbjct: 89 RVLALTFPSPEGDVRVVCAYCPNGQAVGSDKYAYKLD------WFEAMRAWLADEIKQYP 142 Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + GD+N F +D L + + + Sbjct: 143 RLAVLGDYNVAPADEDVHNPEKWEGQVLVSEPERKAFGALLDLG--LADSFRLFEQPEKS 200 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ K I + D R ++ SDH P+ Sbjct: 201 FSWWDYRQFAFRRNAGLRIDHVLLSAPLVKRCIACAI-------DKEPRRNEQPSDHAPV 253 Query: 299 SIDYDF 304 +F Sbjct: 254 IATLEF 259 >gi|254522846|ref|ZP_05134901.1| endonuclease/exonuclease/phosphatase family protein [Stenotrophomonas sp. SKA14] gi|219720437|gb|EED38962.1| endonuclease/exonuclease/phosphatase family protein [Stenotrophomonas sp. SKA14] Length = 291 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 37/293 (12%), Positives = 89/293 (30%), Gaps = 33/293 (11%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 V A+ ++++S+N+ KR + + + ++ QE Sbjct: 27 VFAWAATPAPLKVMSFNVR-------TPADTEPGKRWPDRRDAMVKVILDAHPAVIGTQE 79 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + A + F R + + + + P + Sbjct: 80 LVKEQADYLSEHLPGYRWFGEGRR-GGSGDEHMGVFYDSKVLAIEASGNFWLSDTPDVPG 138 Query: 134 KDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 ++ R L +G++ + +D HL + A+ + Sbjct: 139 SITWGNLYPRMVTWALFRRLEDGRRFYFMDTHLPY----------RDEDEPRRVKGAELI 188 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 + + +P V+ GDFN + F + + + ++ P+ + Sbjct: 189 GKRLAT-LPADLPVVLTGDFNSEPG-GETYKAFTRVLQDTRTQVKAPQGPRLTFHDFTGK 246 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +D+ ++ F+ + DD + G SDH P+ ++ D+ Sbjct: 247 ATVQ-LDWVLVRG----------FTARSFLTDDRRIDGVLPSDHFPLVVELDW 288 >gi|319774993|ref|YP_004137481.1| exodeoxyribonuclease III [Haemophilus influenzae F3047] gi|329123105|ref|ZP_08251675.1| exodeoxyribonuclease III [Haemophilus aegyptius ATCC 11116] gi|317449584|emb|CBY85789.1| exodeoxyribonuclease III [Haemophilus influenzae F3047] gi|327471660|gb|EGF17102.1| exodeoxyribonuclease III [Haemophilus aegyptius ATCC 11116] Length = 267 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 88/311 (28%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + D++ LQE + Sbjct: 1 MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEAFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + +F+ H +A+ K + + +D+ R Sbjct: 45 EITENLGYHVFHH------------GQKGHYGVALLTKQEPKVVRRGFPTDNEDAQKR-- 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +E + V++ F T+ + L+ ++ ++ + Sbjct: 91 ---IIMADLETEFGLLTVIN-----GYFPQGESRTHETKFPAKEKFYADLQQYLEKEHDK 142 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 P +I GD N + L +++ + F K Sbjct: 143 SNPILIMGDMNISPSDLDIGIGDENRKRWLSTGKCSFLPEERAWYQRLYDYGLEDSFRKL 202 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + ID+ ++ Q + + ++ Sbjct: 203 NPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAERCVDVGI-------ALDIRAMEK 255 Query: 292 LSDHCPISIDY 302 SDH PI ++ Sbjct: 256 PSDHAPIWAEF 266 >gi|308050255|ref|YP_003913821.1| exodeoxyribonuclease III [Ferrimonas balearica DSM 9799] gi|307632445|gb|ADN76747.1| Exodeoxyribonuclease III [Ferrimonas balearica DSM 9799] Length = 268 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 77/311 (24%), Gaps = 76/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ VS+NIN L + L+ D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARLHQLQALIDKHQPDVIGLQETKVDDPQFPL 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + H +A+ K V + Q +D A Sbjct: 45 EAVEAMGYHVAFH------------GQKGHYGVAMLTKQVPLAVQKGFATDEED----AQ 88 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + + NG+ + VL+ F + + L + +++ Sbjct: 89 RRMIMVTVADANGQPVHVLN-----GYFPQGENRDHETKFPAKRRFYADLMSHLNTHRQA 143 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 V+ GD N L ++ T+ F Sbjct: 144 DEQVVVMGDINISPTDLDIGIGEPNAKRWLKTGKCSFLPEEREWLATLLNWGLTDSFRHL 203 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + ID + L D ++ Sbjct: 204 NPEEAQTYSWFDYRSRGFDDNRGLRIDVILTSAPLTARLDSAGV-------DYELRGIEK 256 Query: 292 LSDHCPISIDY 302 SDH PI Sbjct: 257 PSDHAPIWTTI 267 >gi|322832771|ref|YP_004212798.1| exodeoxyribonuclease III [Rahnella sp. Y9602] gi|321167972|gb|ADW73671.1| exodeoxyribonuclease III [Rahnella sp. Y9602] Length = 269 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 76/310 (24%), Gaps = 73/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + H +A+ K V + R Sbjct: 42 FP-------LEEVSQHGYHVFYHGQKGHYGVAMLTKQEPVAVRR-----GFPGDDEESQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + +E + V++ F + + + L+D++T Sbjct: 90 RIIMTDIETPQGILTVIN-----GYFPQGESRDHPTKFPAKEKFYRDLQDYLTTSLSVNN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P V+ GD N L ++ + + F Sbjct: 145 PVVVMGDVNISPTDLDIGIGEDSRKRWLRTGKCSFLPEEREWMDRLKGWGLIDTFRAANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + I D +R S Sbjct: 205 DTADKFSWFDYRSRGFDENRGLRIDLIMASTPLAARCIATGI-------DYDIRGMERPS 257 Query: 294 DHCPISIDYD 303 DH PI +D Sbjct: 258 DHAPIWATFD 267 >gi|300312415|ref|YP_003776507.1| exodeoxyribonuclease III protein [Herbaspirillum seropedicae SmR1] gi|300075200|gb|ADJ64599.1| exodeoxyribonuclease III protein [Herbaspirillum seropedicae SmR1] Length = 255 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 30/303 (9%), Positives = 83/303 (27%), Gaps = 74/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + ++ + D++ LQE + Sbjct: 1 MKIATWNVNSL----------------KVRLPQVLKWLEENPVDVLCLQETKLTDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + S + +A+ ++ + + Sbjct: 41 ------KFPAAEIAAAGYLVEFSGQKTYNGVAILSRHPMNDVVKN------NPLFPDEQQ 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + +E + + ++ + L+S + Y L +W+ Q+K Sbjct: 89 RIIAATIE----GVRYVCAYIPNGQSLESEKYPYK------LNWLAALHEWLAQEKAKNP 138 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 + GD+N +D ++ + + + + Sbjct: 139 RLALLGDYNIAPEDRDVHDPVAWQGQVLVSEPEREAFRKLQALGLTDSY-RLFEQPEKMY 197 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ + D + + ++ SDH P+ Sbjct: 198 SWWDYRQMGFRLNRGLRIDHILLSEELVPRCTACVI-------DKVPRKWEQPSDHAPVI 250 Query: 300 IDY 302 Sbjct: 251 ATL 253 >gi|51092216|gb|AAT94521.1| GH03334p [Drosophila melanogaster] Length = 526 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 99/317 (31%), Gaps = 39/317 (12%) Query: 16 CTAS-VAQKVRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 C+A +RL+ WNI TL +G L+ Q D++ L Sbjct: 186 CSAPVEGDDIRLLQWNILSQTLGQHNDGFVRCPEEALTWEHRKYLIVQEILQNQPDVICL 245 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE+ + + V + + + +N AI ++ +++ + Sbjct: 246 QEVDHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYKRDKLQLQGYDTRI 305 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 L S A L + +G++ V HLK+ + L ++Q + Sbjct: 306 LEVWRVQSN-QVAIAARLRMRSSGREFCVATTHLKARHG--------ALLAKLRNEQGRD 356 Query: 191 LKDWITQKKESLVPFVIAGDFNRKI------------------NYLGNNDDFWKTIDPND 232 L ++ Q P ++ GDFN + Y D + + PN Sbjct: 357 LIRFVKQFAG-DTPLLLCGDFNAEPVEPIYATILGCDLLRLGSAYADVKLDREEILHPNA 415 Query: 233 SLIRFPKEKDSRCNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + F + R + + IDY + K F + Sbjct: 416 DVGEFVAKSMKREPPYTTWKIREEGEECHTIDYVFYTPDRLKIKNCLYFPAGEQIGKNRT 475 Query: 287 SRGKRLSDHCPISIDYD 303 + SDH + D++ Sbjct: 476 PSFQYPSDHFSLVCDFE 492 >gi|238794520|ref|ZP_04638129.1| Exodeoxyribonuclease III [Yersinia intermedia ATCC 29909] gi|238726203|gb|EEQ17748.1| Exodeoxyribonuclease III [Yersinia intermedia ATCC 29909] Length = 271 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 79/310 (25%), Gaps = 73/310 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ VS+NIN L + L + D++ LQE Sbjct: 3 TMKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDD 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 +FP + H +A+ KN + + +D+ Sbjct: 44 MFP-------LEDVSQHGYHVFYHGQKGHYGVALLTKNEPLAVRRGFPTDEEDA-----Q 91 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 RR + + + + V++ F + + L+ ++ Q+ + Sbjct: 92 RRIIMADIATSNGPLTVIN-----GYFPQGESRDHPIKFPAKERFYADLQQYLEQQLSAD 146 Query: 203 VPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 +I GD N L + + + F Sbjct: 147 AQVLIMGDLNISPTDLDIGIGEDSRKRWLRTGKCSFLPEERAWLARLQNWGLVDTFRAAN 206 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID + Q I D ++ Sbjct: 207 PECNDQFSWFDYRSRGFDENRGLRIDLLLASQPLATRCIATGI-------DYEIRGMEKP 259 Query: 293 SDHCPISIDY 302 SDH P+ ++ Sbjct: 260 SDHAPVWSEF 269 >gi|115375620|ref|ZP_01462877.1| exodeoxyribonuclease III [Stigmatella aurantiaca DW4/3-1] gi|115367396|gb|EAU66374.1| exodeoxyribonuclease III [Stigmatella aurantiaca DW4/3-1] Length = 263 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 85/303 (28%), Gaps = 72/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N + L + K D++ LQE+ +A Sbjct: 7 MKIASWNVN----------------SVRARQERLLNWLKAHQPDVLCLQELKCVDA---- 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + +A+ K +LG D + R Sbjct: 47 ------DFPTEAVREAGYHAVTHGQKTYNGVAILSKAEPSDV----VLGLSDGVEDSHAR 96 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V+ ++ + +DS Y L+ ++ + Sbjct: 97 LIAATV-----SGVRVVSAYVPNGQAVDSPAYVYKLEWYSR------LRRYLEARHTPDQ 145 Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD+N + D D + + F K Sbjct: 146 PLVLCGDWNVAPEPIDVYDPAVWEGQTLFTLKERDALQQVCAFGLADTFRKLHPGVEKKF 205 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ + L++ D + +GK+ SDH P+ Sbjct: 206 SWWDYRGLSFPKNLGVRIDHIFATAPLVQRLVKAEI-------DREERKGKQPSDHAPVW 258 Query: 300 IDY 302 ++ Sbjct: 259 AEF 261 >gi|295085529|emb|CBK67052.1| Metal-dependent hydrolase [Bacteroides xylanisolvens XB1A] Length = 611 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 81/304 (26%), Gaps = 63/304 (20%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K L + L +RL+++NI + + + + + Sbjct: 4 MKKIFLLISVILFIFPVQAQHTLRLMTYNIKNANGMDDICS-----------FQRVANVI 52 Query: 62 KNLDADIVFLQEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N D+V +QE+ S + V + I + Sbjct: 53 NNASPDVVAIQEVDSMTRRSGQKYVLGEIAERTQMHACFAPAIE----FEGGKYGIGLLT 108 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K V + Q+ PL G R R + E HL S Sbjct: 109 KQVPLRLQTIPLPG------REEARTLILAEFE----DYIYCCTHL-------------S 145 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + + +K I K+ P +AGD N + + F Sbjct: 146 LAEEDRMKSLEIVKSLIASYKK---PLFLAGDMNAEPESDFIK----------ELQKDFQ 192 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + K IDY + S + SDH PI Sbjct: 193 ILSNPEKHTYPAPDPKETIDYIAASKQNATGFAVISARVVN---------EPMASDHRPI 243 Query: 299 SIDY 302 ++ Sbjct: 244 LVEL 247 >gi|170726264|ref|YP_001760290.1| endonuclease/exonuclease/phosphatase [Shewanella woodyi ATCC 51908] gi|169811611|gb|ACA86195.1| Endonuclease/exonuclease/phosphatase [Shewanella woodyi ATCC 51908] Length = 940 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 43/333 (12%), Positives = 86/333 (25%), Gaps = 49/333 (14%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDAD 67 + + + + S+N+ +G + + + +DAD Sbjct: 447 LAPELAAGGNLTVASFNVLNYFNGDGAGGGFPTPRGADTATEFERQRAKIISAMVGIDAD 506 Query: 68 IVFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNV 121 + L E+ + +A+A + I + +N D I + R V Sbjct: 507 LFGLMEIENDGFGSDSAIADLVSGLNTAIGETRYGYVNAGGSSIGTDAIAVGMIYRLDKV 566 Query: 122 --------RVLQQSYPLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDIHLKSFCF-- 169 S F+ NR + +N + V H KS Sbjct: 567 SPQGAAKILSTANSPLDDAGAPLFNDGKNRPMLTQSFSVNDSDESFVVAVNHFKSKGSNC 626 Query: 170 ---LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 D N +C++ +A + P ++ GD N Sbjct: 627 DSLGDPNLNDGQGNCNVTRTRAAQAVGTWLAAEYPQAPVLLIGDLNAYAQENP-----LT 681 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + F + +D+ + + ++ + I +E I Sbjct: 682 ALKDAGFTELFDHLDKVGAYSYVFSGETGQLDHALANSELIDSVVDVTEWHINTDEPRIL 741 Query: 287 SRG-----------------KRLSDHCPISIDY 302 R SDH P+ + Sbjct: 742 DYNEEFKSASQIENLYSDSAYRSSDHDPVVVSL 774 >gi|315634109|ref|ZP_07889398.1| exodeoxyribonuclease III [Aggregatibacter segnis ATCC 33393] gi|315477359|gb|EFU68102.1| exodeoxyribonuclease III [Aggregatibacter segnis ATCC 33393] Length = 267 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 92/309 (29%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L + DI+ LQE+ +V Sbjct: 1 MKVMSFNINGL----------------RARPHQLEEIIDKYQPDILGLQEI---KVADEV 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP Y + + H +A+ K +L + +++ R Sbjct: 42 FP-------YELVDHLGYHVNHFGQKGHYGVALLSKQAPLLVRKGFPTDDEEAQKR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++ ++ V++ F + + L+ ++ Q + Sbjct: 91 -IIMIDLDTPFGQLTVIN-----GYFPQGESREHPTKFPAKQKFYADLQRYLEQDHNAQN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N + L ++++ + F Sbjct: 145 PVIIMGDMNISPSDLDIGIGEENRKRWLRTGKCSFLPEEREWYQRLYAYGLEDTFRYLNP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + + ID+ + ++ + + + D + S Sbjct: 205 TVNDKFSWFDYRSKGFNDNRGLRIDHILANKALAAHCVDSGIALDIRAMD-------KPS 257 Query: 294 DHCPISIDY 302 DH PI ++ Sbjct: 258 DHAPIWAEF 266 >gi|297622787|ref|YP_003704221.1| endonuclease/exonuclease/phosphatase [Truepera radiovictrix DSM 17093] gi|297163967|gb|ADI13678.1| Endonuclease/exonuclease/phosphatase [Truepera radiovictrix DSM 17093] Length = 865 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 39/317 (12%), Positives = 79/317 (24%), Gaps = 36/317 (11%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 A V +++ S+N+ G ++ + L + +DAD+V L E+ Sbjct: 464 AAPADVGGDLKVASFNVLNYFTTFGSRGAGDAAQFARQR-AKLFAALRRIDADVVGLIEI 522 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + +N + + + T K+ + L+ Sbjct: 523 ENNGDGEGSAIRNLVDGLNAVY--GSEVYAVVPDPADTGTDAIKQTFIYKPAALELVAVA 580 Query: 135 DSFSRAGNRRAVELLVEINGKK---IWVLDIHLKSFCFL---DSLENTYSPSCSLLSQQA 188 + NR V G + H KS D+ + Q Sbjct: 581 SDSASVHNRPPVAATFRQRGAPHGLFTAVVAHHKSKRCSEGFDARPGDTEQAFEGCFNQL 640 Query: 189 QW-------LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + + ++ GD N + + + + Sbjct: 641 RTEQSQALAAFAADLKAAHGDTDVLLMGDLNAYALEDPI-----AVLTGSGFENLTLRLQ 695 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------------ 289 D+ + +DY + + + I +E Sbjct: 696 DAARYSFVFDGESGTLDYALASPSLAAQVTGVDIWHINPDEPRALEYDSAPRFGGEDRFT 755 Query: 290 ---KRLSDHCPISIDYD 303 R SDH P+ I Sbjct: 756 PTPYRSSDHDPVIIGLS 772 >gi|213967028|ref|ZP_03395178.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato T1] gi|301385213|ref|ZP_07233631.1| exonuclease III [Pseudomonas syringae pv. tomato Max13] gi|302059606|ref|ZP_07251147.1| exonuclease III [Pseudomonas syringae pv. tomato K40] gi|302130154|ref|ZP_07256144.1| exonuclease III [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928350|gb|EEB61895.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato T1] Length = 270 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 81/312 (25%), Gaps = 74/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ +N + G + + R Sbjct: 41 ------QFPLADVEALGYHVHFHGQKGHYGVALLSRNPPLALHK----GFESDDEESQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + NG+ + +++ F + + + L+ + + + Sbjct: 91 FIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQALLEGQFSNEQ 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 P ++ GD N ++L ++ + + + F Sbjct: 146 PLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRYLYP 205 Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + + D ++ Sbjct: 206 EVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKAAGV-------DYDLRGMEK 258 Query: 292 LSDHCPISIDYD 303 SDH PI ++ Sbjct: 259 PSDHAPIWLELS 270 >gi|254780288|ref|YP_003064701.1| exodeoxyribonuclease III protein [Candidatus Liberibacter asiaticus str. psy62] gi|254039965|gb|ACT56761.1| exodeoxyribonuclease III protein [Candidatus Liberibacter asiaticus str. psy62] Length = 281 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 86/303 (28%), Gaps = 67/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 V + +WN+N + L + K + DI+ LQE + + Sbjct: 4 VTVATWNVN----------------SIRARIHNLAAWIKENNPDIICLQETKTED----- 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + T + +N+ + +A+ K + ++ D +R Sbjct: 43 -----KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARF--- 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E IN + + + +++L + S + S + + +Q+ E Sbjct: 95 --IEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS------WIKRFLRFASQRLELEE 146 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNANK 249 P + AGD+N + D N + + Sbjct: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ID+ ++ A L D + SDH P+ + Sbjct: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLL-------HSARIDTKPRGWTKPSDHTPVIV 259 Query: 301 DYD 303 D Sbjct: 260 SLD 262 >gi|145630665|ref|ZP_01786444.1| exodeoxyribonuclease III [Haemophilus influenzae R3021] gi|260582045|ref|ZP_05849840.1| exodeoxyribonuclease III [Haemophilus influenzae NT127] gi|144983791|gb|EDJ91241.1| exodeoxyribonuclease III [Haemophilus influenzae R3021] gi|260094935|gb|EEW78828.1| exodeoxyribonuclease III [Haemophilus influenzae NT127] Length = 267 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 86/311 (27%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + D++ LQE + Sbjct: 1 MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEAFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + +F+ H +A+ K + +D R Sbjct: 45 EITENLGYHVFHH------------GQKGHYGVALLTKQEPKAVRRGFPTDNEDVQKR-- 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +E + V++ F + + L+ ++ ++ + Sbjct: 91 ---IIMADLETEFGLLTVIN-----GYFPQGESRAHETKFPAKEKFYADLQQYLEKEHDK 142 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 P +I GD N + L ++++ + F K Sbjct: 143 SNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEEREWYQRLYDYGLEDSFRKM 202 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + ID+ ++ Q + + ++ Sbjct: 203 NPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAERCVDVGI-------ALDIRAMEK 255 Query: 292 LSDHCPISIDY 302 SDH PI ++ Sbjct: 256 PSDHAPIWAEF 266 >gi|16272016|ref|NP_438214.1| exonuclease III [Haemophilus influenzae Rd KW20] gi|145636755|ref|ZP_01792421.1| exodeoxyribonuclease III [Haemophilus influenzae PittHH] gi|260580655|ref|ZP_05848482.1| exodeoxyribonuclease III [Haemophilus influenzae RdAW] gi|1169570|sp|P44318|EX3_HAEIN RecName: Full=Exodeoxyribonuclease III; Short=EXO III; Short=Exonuclease III gi|1572987|gb|AAC21719.1| exodeoxyribonuclease III (xthA) [Haemophilus influenzae Rd KW20] gi|145270053|gb|EDK09990.1| exodeoxyribonuclease III [Haemophilus influenzae PittHH] gi|260092717|gb|EEW76653.1| exodeoxyribonuclease III [Haemophilus influenzae RdAW] Length = 267 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 87/311 (27%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + D++ LQE + Sbjct: 1 MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEAFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + +F+ H +A+ K + + +D+ R Sbjct: 45 EITENLGYHVFHH------------GQKGHYGVALLTKQEPKVIRRGFPTDNEDAQKR-- 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +E + V++ F + + L+ ++ ++ + Sbjct: 91 ---IIMADLETEFGLLTVIN-----GYFPQGESRAHETKFPAKEKFYADLQQYLEKEHDK 142 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 P +I GD N + L +++ + F K Sbjct: 143 SNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEERAWYQRLYDYGLEDSFRKL 202 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + ID+ ++ Q + + ++ Sbjct: 203 NPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAERCVDVGI-------ALDIRAMEK 255 Query: 292 LSDHCPISIDY 302 SDH PI ++ Sbjct: 256 PSDHAPIWAEF 266 >gi|156934327|ref|YP_001438243.1| exonuclease III [Cronobacter sakazakii ATCC BAA-894] gi|156532581|gb|ABU77407.1| hypothetical protein ESA_02158 [Cronobacter sakazakii ATCC BAA-894] Length = 268 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 78/311 (25%), Gaps = 75/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +S+NIN L + L + D++ LQE + Sbjct: 1 MKFISFNINGL----------------RARPHQLAALVEQHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K V + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKATPVSVRR-----GFPGDGEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + I V++ F + ++ Q L+D++ + Sbjct: 90 RIIMAEIPSSIGDITVIN-----GYFPQGESRDHEVKFPAKAKFYQDLQDYLETALSNDK 144 Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 P +I GD N + + ++ F Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMGRLLN-WGLKDTFRHAN 203 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID + L + D ++ Sbjct: 204 PETSDRYSWFDYRSKGFDDNRGLRIDLLLASDPLMARLAETGI-------DYDIRAMEKP 256 Query: 293 SDHCPISIDYD 303 SDH P+ + Sbjct: 257 SDHAPVWATFS 267 >gi|302404834|ref|XP_003000254.1| endonuclease/exonuclease/phosphatase family protein [Verticillium albo-atrum VaMs.102] gi|261360911|gb|EEY23339.1| endonuclease/exonuclease/phosphatase family protein [Verticillium albo-atrum VaMs.102] Length = 298 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 78/294 (26%), Gaps = 21/294 (7%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 ++ A VR+V++N+ + + K+ R T L + D+ + LQE+ Sbjct: 8 SSGEALPVRVVTFNVRY-AAPRPMPNEKSWQVRCPKICTQLDFITRGHDSPFLCLQEVLY 66 Query: 77 YNAVAKVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + W + S + P +K Sbjct: 67 PQLLDIQAGLGEGWGYVGIGRDDGDRLGELSPVFYRVGTWKCEVFKNYWLSETPDRPSK- 125 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + A R + + F S L+ + A + Sbjct: 126 GWDAALPRIVTVGEFVHKRTGQRAVVMSTH---FDHLGVVAREQSAKLILRIAAQWAE-- 180 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD-SRCNANKNLRNK 254 + ++ GDFN + K D+ P EK + Sbjct: 181 ERASSPPAAVILGGDFNSNPSDNAYKSMVAKGSGMADAHALVPSEKRYGNELTYTSFDEP 240 Query: 255 I----PIDYFVMDQNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPISIDYD 303 ID+ + + + + + G LSDH P+ D + Sbjct: 241 DQQAVRIDFIFV-------KVPSNVKVTTFGVLTNRFDDGVFLSDHRPVVADLE 287 >gi|153809236|ref|ZP_01961904.1| hypothetical protein BACCAC_03547 [Bacteroides caccae ATCC 43185] gi|149128212|gb|EDM19432.1| hypothetical protein BACCAC_03547 [Bacteroides caccae ATCC 43185] Length = 353 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 41/351 (11%), Positives = 88/351 (25%), Gaps = 56/351 (15%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQ-------EGVSLWKNSVKRTTSD 53 M ++ + F L+ + ++V +N+ + + + K T+ Sbjct: 10 MKKQLFCTIFFVLLISVCFGQKPYKVVFYNLENFFDTINDPEVKDDEFTPEGPKKWNTAK 69 Query: 54 Y-TLLRQY---------AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103 Y L ++ + E+ + N + + I+H Sbjct: 70 YNKKLGNIERVLFGMAAIDKEYPIVIGVSEVENRNVLEDIVATPK---LAPGNYRISHFD 126 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 + A R ++ YP+ S R + + I + + + H Sbjct: 127 SPEARGVDVAFLYRPDVFKLE-GQYPVKTVIPSLPDFKTRDILTMWGTIEDEPFFFMVAH 185 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 S + + +Q + + D + Q + V+ GDFN + Sbjct: 186 WPSRLGGKDVSEFKRIAV---GRQMRSIADSVLQANPATK-IVMMGDFNDDPTDKSITEG 241 Query: 224 F-----WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ------ 272 K + D + + D V+ +N K Sbjct: 242 LGAKLKMKDLSAGDLYAPYADMLKAGYGTLAYGDAWNIFDNIVISENLAKGSTGKLKIQK 301 Query: 273 --------------------ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + SDH P+ I Sbjct: 302 APGSKFYGNIFKQHYMIQKEGQYKGYPLRTYVGNNFQGGFSDHFPVYIYIS 352 >gi|271500687|ref|YP_003333712.1| exodeoxyribonuclease III [Dickeya dadantii Ech586] gi|270344242|gb|ACZ77007.1| exodeoxyribonuclease III [Dickeya dadantii Ech586] Length = 268 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 82/310 (26%), Gaps = 73/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLAAVIEQHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + F + H +A+ K + + +D+ R Sbjct: 42 FPLDDVKQF-------GYHVFYHGQKGHYGVALLTKAEPLAVRRGFPTDDEDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + ++ Q L+ ++ Q ++ Sbjct: 90 RIIMADLATPLGTLTVVN-----GYFPQGESRDHPVKFPAKTRFYQDLQHYLEQHHQADQ 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + + F Sbjct: 145 PVLIMGDMNISPTDLDIGIGEDNRKRWLRTGKCSFLPEEREWMERLKNWGLVDTFRAANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + D ++ S Sbjct: 205 ECQDKFSWFDYRSSGFDDNRGLRIDLIMATSPLASRCTATGI-------DYAIRGMEKPS 257 Query: 294 DHCPISIDYD 303 DH P+ ++ Sbjct: 258 DHAPVWAEFT 267 >gi|226225662|ref|YP_002759768.1| hypothetical protein GAU_0256 [Gemmatimonas aurantiaca T-27] gi|226088853|dbj|BAH37298.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 257 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 41/293 (13%), Positives = 79/293 (26%), Gaps = 52/293 (17%) Query: 11 FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + S+NI +GV D + L AD+V Sbjct: 11 VLAATRVPPQDDAFTVASYNIRHGRGMDGV-----------VDLHRTGEAIARLGADVVA 59 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 LQE+ + + + + +A+ + Q+ L Sbjct: 60 LQEVDRNVERSGRVDEPRVLGEQLSMSHAFGAF-MPYQGGEYGMAIVSRLPIRRSQALRL 118 Query: 131 LGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 R A+ +E+ G ++ V+++H L Q + Sbjct: 119 PDGN------EPRVALLAELELPSGARVLVVNVHFDWVGNDT-----------LRYAQVK 161 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L + +P ++ GDFN + +T+ R + +S Sbjct: 162 ALGAVLDTV---RLPVILLGDFNDQPAS--------RTLQHWQPRFRVAAKPESDRFTFS 210 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + K ID+ + + + + SDH PI Sbjct: 211 STEPKQEIDHIL----LAPARAWGEATVRVITDPIT-------SDHRPIVAQL 252 >gi|237731238|ref|ZP_04561719.1| exonuclease III [Citrobacter sp. 30_2] gi|226906777|gb|EEH92695.1| exonuclease III [Citrobacter sp. 30_2] Length = 272 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 81/312 (25%), Gaps = 73/312 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++ VS+NIN L + L + D++ LQE Sbjct: 2 AATMKFVSFNINGL----------------RARPHQLAAIVEKHQPDVIGLQE---TKVH 42 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +FP + ++ H +A+ K + + Sbjct: 43 DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEE 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + + I V++ F + + Q L++++ + + Sbjct: 91 AQRRIIMAEIPSPLGSITVIN-----GYFPQGESRDHETKFPAKAAFYQNLQNYLETELK 145 Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239 P +I GD N L ++ + + + + Sbjct: 146 RDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLLGWGLVDTYRH 205 Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + + ID + + + D + Sbjct: 206 ANPEKNDQFSWFDYRSKGFDDNRGLRIDLLLASNPLAERCEETGI-------DYEIRSME 258 Query: 291 RLSDHCPISIDY 302 + SDH P+ + Sbjct: 259 KPSDHAPVWAKF 270 >gi|261343612|ref|ZP_05971257.1| exodeoxyribonuclease III [Providencia rustigianii DSM 4541] gi|282567993|gb|EFB73528.1| exodeoxyribonuclease III [Providencia rustigianii DSM 4541] Length = 271 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 38/310 (12%), Positives = 87/310 (28%), Gaps = 73/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +S+NIN L + L + +++ LQE + Sbjct: 1 MKFISFNINGL----------------RARPHQLAAIIEKHQPEVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + H +A+ KN + + +D+ R Sbjct: 42 FPYDE-------VSKLGYHVFYHGQKAHYGVALLLKNEPIAVRKGFPNDDEDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + ++ N + V++ F + + Q L+D++T + Sbjct: 90 RIIMADIQTNQGLLTVVN-----GYFPQGESRDHPTKFPAKQKFYQDLQDYVTSTQTPES 144 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 +I GD N L ++ + + + ++ Sbjct: 145 QLLIMGDMNISPTDLDIGIGEVNRKRWLKTGKCSFLPEEREWLARLLDWGLVDTYREQHP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 ++ + ID + + D ++ S Sbjct: 205 DTTDSYSWFDYRSKGFDDNRGLRIDLLLASKKLASRCTATGI-------DLEIRGMEKPS 257 Query: 294 DHCPISIDYD 303 DH P+ ++D Sbjct: 258 DHAPVWAEFD 267 >gi|222150158|ref|YP_002551115.1| Metal-dependent exonuclease protein [Agrobacterium vitis S4] gi|221737140|gb|ACM38103.1| Metal-dependent exonuclease protein [Agrobacterium vitis S4] Length = 286 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 89/310 (28%), Gaps = 54/310 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 +R VS+NI +G D + + AD++ LQE+ Sbjct: 1 MRFVSYNIQYGIGLDGKF-----------DPIRIAKNL--EGADVIALQEVTRGYPANGG 47 Query: 75 -GSYNAVAKVFPKNTWCIFYSTERLINH---SKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 A FP+ W + + + R + V + + + L Sbjct: 48 ADLPEIFANHFPEYHWVYGPACDLHASSALIKGRRVDKRFQFGNMVLSRWPILANRMLLL 107 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ---- 186 + R A E +++ G + V +HL + + ++ Sbjct: 108 PRTRTFEKLNNQRAATEAVIDAPGGALRVYSVHLDHVAPDERIAQIRFLKDRAINFIQEG 167 Query: 187 -QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-------FWKTIDPNDSLIRFP 238 +++ + F++ GDFN + + + +T + L Sbjct: 168 GAMTGGQEFALPQPPLPEDFLLMGDFNMQPESPEYREMVGTIDAYYGRTARADAPLDALA 227 Query: 239 KEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ++ +DY + + L S S Sbjct: 228 RLGKLNAGSYSWEEVGKPDMRMHLDYCFLSGSLAHRLKAASV-----------DTDAVGS 276 Query: 294 DHCPISIDYD 303 DH P+ ++ D Sbjct: 277 DHFPVWVELD 286 >gi|172062389|ref|YP_001810040.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MC40-6] gi|171994906|gb|ACB65824.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MC40-6] Length = 604 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 93/316 (29%), Gaps = 48/316 (15%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ N + + + R +Y + K LDAD++ L E+ Sbjct: 293 LRVASFNVLNYFNGNGMGGGFDDPNNRGAKNYQEFQRQEAKIVSALKALDADVIGLMEIQ 352 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + S R+++ R + I A+ + V P+ A Sbjct: 353 NNGYGELSAVRQLAAKLGSNWRVVDPGTSRLGGDAITVAMIYDSRTVE------PVGRAS 406 Query: 135 DSFSRAGNRRAVELLVE---INGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLS 185 NR+ + N + + + HLKS D+ + + Sbjct: 407 TLAIDDKNRQPLAQSFRRVGGNKQALTIAVNHLKSKNCPDAANDDLDQGDGQGCWNPTRT 466 Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + A L DW+ + ++ GDFN + ++ + + Sbjct: 467 RAAAKLADWLAGTPTGVAGQGTLLIGDFNSYTYEDPI-----RLLEARGYRNLVSRWIGA 521 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIK 286 + +D+ + + I +E Sbjct: 522 NAYSYVYNGEAGYLDHALASLPLASHVKAVHEWHINADEPLALQYTLAYKSAEQQKTYYA 581 Query: 287 SRGKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 582 PDAYRSSDHDPVLIDI 597 >gi|261493298|ref|ZP_05989824.1| exodeoxyribonuclease III [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496564|ref|ZP_05992944.1| exodeoxyribonuclease III [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307767|gb|EEY09090.1| exodeoxyribonuclease III [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310942|gb|EEY12119.1| exodeoxyribonuclease III [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 291 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 38/325 (11%), Positives = 91/325 (28%), Gaps = 77/325 (23%) Query: 10 VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 +FF + T + ++ +S+NIN L + L + D++ Sbjct: 11 IFFFILQTLRLGLSMKFISFNINGL----------------RARPHQLEAIIEKHQPDVL 54 Query: 70 FLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 LQE + + + + +F+ H +A+ K + + Sbjct: 55 GLQEIKVADEDFPYDLVNHLGYHVFHH------------GQKGHYGVALLTKKEPIAVRK 102 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 D+ R + +E + + VL+ F ++ + Sbjct: 103 GFPTDVLDAQKR-----MIMADIETDFGVLTVLN-----GYFPQGENRSHETKFPAKQKF 152 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINY---------------------LGNNDDFWK 226 L++++ + + P +I GD N L ++ Sbjct: 153 YADLQNYLESELKPENPIIIMGDMNISPTDLDIGIGEPNRKRWLRDGKCSFLPEEREWLD 212 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSE 277 + + F + + ID + ++ + ++ Sbjct: 213 RLYSYGLVDTFRAGNPDVNDKFSWFDYRSKGFDDNRGLRIDLILASKSLAERCVETGI-- 270 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302 D ++ SDH P+ + Sbjct: 271 -----DLDIRAMEKPSDHSPVWATF 290 >gi|253688361|ref|YP_003017551.1| exodeoxyribonuclease III [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754939|gb|ACT13015.1| exodeoxyribonuclease III [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 272 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 36/312 (11%), Positives = 80/312 (25%), Gaps = 73/312 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +++VS+NIN L + L + D++ LQE ++ + Sbjct: 2 AANMKVVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQETKVHDDM 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + + + H +A+ K + + D+ Sbjct: 46 FPLEDVSQY----------GYHVYYHGQKGHYGVALLCKAQPIAVRRGFPTDEDDA---- 91 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + +++ F + ++ Q L+ ++ Q Sbjct: 92 -QRRIIMADFATEHGTFTIVN-----GYFPQGESRDHPVKFPAKTRFYQDLQTYLEQHHS 145 Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239 + P ++ GD N L ++ + + F Sbjct: 146 ATQPLIVMGDVNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMARLQGWGLIDTFRA 205 Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + + D + Sbjct: 206 ANPESNDRFSWFDYRSAGFDDNRGLRIDLILASNFLADRCVATGI-------DYDIRGME 258 Query: 291 RLSDHCPISIDY 302 + SDH PI + Sbjct: 259 KPSDHAPIWAQF 270 >gi|115359939|ref|YP_777077.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD] gi|115285227|gb|ABI90743.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD] Length = 604 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 93/316 (29%), Gaps = 48/316 (15%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ N + + + R +Y + K LDAD++ L E+ Sbjct: 293 LRVASFNVLNYFNGNGMGGGFDDPNNRGAKNYQEFQRQEAKIVSALKALDADVIGLMEIQ 352 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + S R+++ R + I A+ + V P+ A Sbjct: 353 NNGYGELSAVRQLAAKLGSNWRVVDPGTSRLGGDAITVAMIYDSRTVE------PVGRAS 406 Query: 135 DSFSRAGNRRAVELLVE---INGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLS 185 NR+ + N + + + HLKS D+ + + Sbjct: 407 TLAIDDKNRQPLAQSFRRVGGNKQALTIAVNHLKSKNCPDAANDDLDQGDGQGCWNPTRT 466 Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + A L DW+ + ++ GDFN + ++ + + Sbjct: 467 RAAAKLADWLAGTPTGVAGQGTLLIGDFNSYTYEDPI-----RLLEARGYRNLVSRWIGA 521 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIK 286 + +D+ + + I +E Sbjct: 522 NAYSYVYNGEAGYLDHALASLPLASHVKAVHEWHINADEPLALQYTLAYKSTEQQKTYYA 581 Query: 287 SRGKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 582 PDAYRSSDHDPVLIDI 597 >gi|71735024|ref|YP_274825.1| exonuclease III [Pseudomonas syringae pv. phaseolicola 1448A] gi|257487832|ref|ZP_05641873.1| exonuclease III [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289625127|ref|ZP_06458081.1| exonuclease III [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648704|ref|ZP_06480047.1| exonuclease III [Pseudomonas syringae pv. aesculi str. 2250] gi|71555577|gb|AAZ34788.1| exodeoxyribonuclease III [Pseudomonas syringae pv. phaseolicola 1448A] gi|320324615|gb|EFW80692.1| exonuclease III [Pseudomonas syringae pv. glycinea str. B076] gi|320328987|gb|EFW84986.1| exonuclease III [Pseudomonas syringae pv. glycinea str. race 4] gi|330867998|gb|EGH02707.1| exonuclease III [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330880714|gb|EGH14863.1| exonuclease III [Pseudomonas syringae pv. glycinea str. race 4] gi|330985313|gb|EGH83416.1| exonuclease III [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008544|gb|EGH88600.1| exonuclease III [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 270 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 82/312 (26%), Gaps = 74/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + + H +A+ +N + G + + R Sbjct: 41 ------QFPHAEVEALGYHVHFHGQKGHYGVALLSRNPPLALHK----GFEGDDEESQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + NG+ + +++ F + + + L+ + + Sbjct: 91 FIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQTLLESHFSNEQ 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 P ++ GD N ++L ++ + + + F Sbjct: 146 PLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRHLYP 205 Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + + D ++ Sbjct: 206 EVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKAAGV-------DYDLRGMEK 258 Query: 292 LSDHCPISIDYD 303 SDH PI ++ + Sbjct: 259 PSDHAPIWLELN 270 >gi|327480794|gb|AEA84104.1| exonuclease III [Pseudomonas stutzeri DSM 4166] Length = 270 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 88/312 (28%), Gaps = 76/312 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGL----------------RARPHQLSAIIDKHQPDVIGLQE---TKVADEQ 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-VRVLQQSYPLLGAKDSFSRAGN 142 FP+ + + + H +A+ + + + +P G + Sbjct: 42 FPQ-------AEIEALGYHVHYHGQKGHYGVALLSRQAPLEVHKGFPSDGEESQKRFIWG 94 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R A + NG+ + V++ F + ++ L+ + Q+ Sbjct: 95 RFA-----DANGQPVTVMN-----GYFPQGESRAHPVKFPAKTKFYADLQALLEQRFSPD 144 Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241 + GDFN ++L ++ + I F Sbjct: 145 ESLALMGDFNISPQDCDIGIGEVNAKRWLRTGKCSFLPEEREWLERIKGWGLQDSFRTLN 204 Query: 242 DSRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + IDY + ++ + D + Sbjct: 205 PKVVDRFSWFDYRSRGFEDEPRRGLRIDYILTTHALHERVTDCGV-------DYDIRAME 257 Query: 291 RLSDHCPISIDY 302 + SDHCP+ I+ Sbjct: 258 KPSDHCPVWIEL 269 >gi|317969204|ref|ZP_07970594.1| exodeoxyribonuclease III [Synechococcus sp. CB0205] Length = 273 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 86/306 (28%), Gaps = 70/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ SWN+N + + + + + D++ LQE + + Sbjct: 1 MRIASWNVN----------------SVRTRLDQVLAWLQTHEPDVLCLQETKVSDDL--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 I + S + +A+ + Q D+ + + Sbjct: 42 -------FPLQAFEQIGYHCAISGQKAYNGVALISREPLEDVQVGFDALLPDAGPLSEQK 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + +++ + +L++++ + L S + Y + L+ ++ ++E Sbjct: 95 RVISGMLD----GVRILNLYVPNGSSLKSEKYHYK------LEWLACLQRYLAVQEEQGD 144 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P + GDFN + + L + + Sbjct: 145 PLCMVGDFNIGLEDRDLPDPQRLSGTIMASDPERSALRAALAD--RLTDVFRVFEPGSGH 202 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ + + D + SDH P+ Sbjct: 203 WSWWDYRSGAWDRDLGWRIDHIYLSEELLGCATGCVI-------DKQPRGNVQPSDHAPV 255 Query: 299 SIDYDF 304 ++ + Sbjct: 256 VVNLAW 261 >gi|239932761|ref|ZP_04689714.1| hypothetical protein SghaA1_31348 [Streptomyces ghanaensis ATCC 14672] Length = 302 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 85/307 (27%), Gaps = 40/307 (13%) Query: 7 LALVFFLVPCTASVAQ-----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 L L +P A+ A+ + ++S+N+ S E ++R Sbjct: 23 LPLASTALPPGAASAKERPDRPLEVMSFNLRFASAAE--------PHSWAVRRPVMRDLL 74 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + ++ QE + T R + T V + Sbjct: 75 RRERPHVIGTQEGLYPQLRDIEADLGPAYDWIGTGREGGSRDEFTAVLYDTQRLVPLEYD 134 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVE---INGKKIWVLDIHLKSFCFLDSLENTYS 178 P + A +++ A R A + G++ VL+ HL + Sbjct: 135 HFWLSDTPDVIASNTWGNAFVRMATRVRFRDLRAGGREFHVLNTHLDN------------ 182 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW-KTIDPNDSLIRF 237 + ++A L VP V+ GDFN + D + Sbjct: 183 -ASQYARERAAALIADRVGGLGRCVPVVVTGDFNVAAHENPVYDTLLGAGLVDTWEAAAE 241 Query: 238 PKEKDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 E + + ID+ ++ + + + G+ SDH Sbjct: 242 RGEPYGTFHGYRPPVPGGPRIDWILVTP---------GVTVHRASVNTFAPAGRFPSDHL 292 Query: 297 PISIDYD 303 P+ Sbjct: 293 PVQAALT 299 >gi|209885397|ref|YP_002289254.1| exodeoxyribonuclease III [Oligotropha carboxidovorans OM5] gi|209873593|gb|ACI93389.1| exodeoxyribonuclease III [Oligotropha carboxidovorans OM5] Length = 260 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 50/304 (16%), Positives = 91/304 (29%), Gaps = 67/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N L + K + D+V LQE+ + + Sbjct: 1 MRIATWNVN----------------SVRQRLDHLVTWLKEREPDLVCLQEI---KCLDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ ++ +A+ K + D +R Sbjct: 42 FPREPLEAL-------GYNVVTHGQKTFNGVALLSKYRFEETRPQLAGDPDDLHARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E +V + ++L + +++ + Y S L + ++ +S Sbjct: 92 --LEGVVSHKDGTFRLACLYLPNGNPVNTEKYPYKLS------WMDRLITYARERIKSEE 143 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 PFV+AGDFN D ++T+ D+ Sbjct: 144 PFVLAGDFNVIPTPADVYNPQAWLGDALFLPQTRDKFQTLLNLGLTDALRATTDAPQQYT 203 Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 N I ID+ +M A L D ++ SDH P+ Sbjct: 204 FWDYQAGAWQKNNGIRIDHLLMSPPAADRLQAVGI-------DKHVRGWEKASDHVPVWA 256 Query: 301 DYDF 304 D DF Sbjct: 257 DLDF 260 >gi|320158919|ref|YP_004191297.1| putative phospholipase C [Vibrio vulnificus MO6-24/O] gi|319934231|gb|ADV89094.1| putative phospholipase C [Vibrio vulnificus MO6-24/O] Length = 442 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 40/291 (13%), Positives = 87/291 (29%), Gaps = 36/291 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 Q ++++++NI L + L+ Y K D++ LQE+ + A Sbjct: 176 QHLKIMTYNIWALPAIASHIG---------ERFELIPDYVKGY--DVLALQEVFANGRDA 224 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + + + + V Q + + A Sbjct: 225 FLRELAKEYPYQTKMLDKDGFNIFDG-----GVIIVSRYPIVNQAQFIFPDCTGTDCFAD 279 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + V G+ V H S+ + + +Q + L + + Sbjct: 280 -KGVNYAEVIKGGEAYHVFATHTASYDTDTARDYRQRQ-----FKQMRALAQSLK--IPA 331 Query: 202 LVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--------- 251 V +GDFN + G+ + + + +S + N Sbjct: 332 NETVVYSGDFNVNKRKFPGDYQQMIANLSAIEPH--YSGYTESTFDPRINNFAGEPLSGG 389 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +DY ++ + +I + + + LSDH P+S Sbjct: 390 ENVEYLDYVMVSNEYAVKGDNNNRVDIPRSTAESLWKHYNLSDHFPVSTVL 440 >gi|75910924|ref|YP_325220.1| endonuclease/exonuclease/phosphatase [Anabaena variabilis ATCC 29413] gi|75704649|gb|ABA24325.1| Endonuclease/exonuclease/phosphatase [Anabaena variabilis ATCC 29413] Length = 2346 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 47/331 (14%), Positives = 97/331 (29%), Gaps = 51/331 (15%) Query: 15 PCTASVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDA 66 T V +++ S+N+ N + S + + +R + L+A Sbjct: 1731 TTTPDVGGTLKVASFNVLNYFNGDGTGSGFTSPEQRGAENLTEFNRQRDKTIAAILGLNA 1790 Query: 67 DIVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKN 120 D+V L E+ + +A+ + T IN D I + + + Sbjct: 1791 DVVGLIEIENDGYGANSAIQDLVNGLNAVAGAGTYAFINPGLSQLGTDAIAVGLIYKPNS 1850 Query: 121 VR-VLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKS-----FCFLDS 172 V + + G NR+ + N G++ + H KS D+ Sbjct: 1851 VTPIGTAATVADGFGQGAFDNNNRKPLAQTFRQNSTGEQFTAVINHFKSKGSSFGNPGDA 1910 Query: 173 LENTYS-PSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTID 229 S ++ +Q L W+ + ++I GD N + ++ Sbjct: 1911 DAGDGQGLSNGTRTRASQDLAAWLATNPTGTTDTDYLILGDLNAYAQEDPI-----RALE 1965 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 P + +D+ + + + L I +E ++ Sbjct: 1966 NAGYNNLLPN----TTYSYVFDGQWGALDHALANASLTAQLSGAVKWHINADEPNVLDYN 2021 Query: 290 -----------------KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 2022 TNFKSVGQQTSLYSPDAFRSSDHDPVIVGLN 2052 >gi|217974553|ref|YP_002359304.1| endonuclease/exonuclease/phosphatase [Shewanella baltica OS223] gi|217499688|gb|ACK47881.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS223] Length = 870 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 48/378 (12%), Positives = 103/378 (27%), Gaps = 88/378 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQ-EGVSLWKNSVKRTTSDYT-------LLRQYAKNLDA 66 + + +R+ S+N+ +G + R + ++A Sbjct: 455 APSVATKGDLRVASFNVLNFFNDVDGGDTNPSGSNRGALTLEEMVLQRTKIVSAITAMNA 514 Query: 67 DIVFLQEMGSYNAVAKVF-------------PKNTWCIFYSTERLINHSKRDSNNDIHTA 113 DIV L E+ + K P+N + T+ K + I Sbjct: 515 DIVGLMEIANNGFGEKSAIKNLVDALNEKQTPENAYSFVEITDADKYDGKYFGTDAITVG 574 Query: 114 IAVRKKNVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155 + R V + + ++ + + A R ++ +I+ + Sbjct: 575 MLYRGGKVTLAGAAQAIDTPEQHASAGSVTRTKDGKTETNPGNDAYQRHSLAQTFKIHDE 634 Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES--- 201 + V+ HLKS + + A+ L + + K Sbjct: 635 SLTVVVNHLKSKGSGCLEDWANFEESVDPADQQGKCNAFRVSAAKVLGETLKDVKGDLLI 694 Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPK 239 P + DF+ + W T+D + K Sbjct: 695 IGDMNAYGMEDPIRVLTDFDASKSDRDIMTASWTTLDGKVFERQGSKIEKGYGLINLNTK 754 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291 + + +D+ + + + K L+ I E ++ GK+ Sbjct: 755 AHGAGTFSYSYNGELGNLDHALANASLAKRLVDIEDWHINSVESNLFEYGKKFSGDLAKS 814 Query: 292 -----LSDHCPISIDYDF 304 SDH P+ + + Sbjct: 815 ENAFSASDHDPVIVALSY 832 >gi|317404954|gb|EFV85317.1| exodeoxyribonuclease III [Achromobacter xylosoxidans C54] Length = 260 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 31/305 (10%), Positives = 80/305 (26%), Gaps = 70/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N+L+ + + D++ +QE+ + Sbjct: 1 MKLATWNVNSLN----------------VRLPQVLDWLAANPVDVLCIQELKLTDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + +A+ + L +D R Sbjct: 41 ------KFPEAAFKEAGYHAVWAGQKTYNGVAIVSRVPGTSMVRN-LPTYEDPQQR---- 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + L + V+ + + + S + Y + ++ W+ + + Sbjct: 90 -VLALTFPSADGDVRVVCAYCPNGQSVGSDKYAYK------LEWFAAMRAWLADEIKQYP 142 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + GD+N + + F + + + Sbjct: 143 RLAVLGDYNVAPADEDVHNPEKWEGQVLVSEPERQALRDLIDLGLADSF-RLFEQPEKSF 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ K D R ++ SDH P+ Sbjct: 202 SWWDYRQFAFRRNAGLRIDHILLSPPLVKRCTACVI-------DKEPRRNEQPSDHAPVV 254 Query: 300 IDYDF 304 F Sbjct: 255 ATLTF 259 >gi|189463613|ref|ZP_03012398.1| hypothetical protein BACCOP_04337 [Bacteroides coprocola DSM 17136] gi|189429716|gb|EDU98700.1| hypothetical protein BACCOP_04337 [Bacteroides coprocola DSM 17136] Length = 342 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 43/338 (12%), Positives = 91/338 (26%), Gaps = 47/338 (13%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV-----------KRTTSD 53 +L L Q +R++ +N+ L + SL +S KR Sbjct: 7 ILLGFAACLTASVCEAQQTLRVMEYNVENLFDCRHDSLKNDSEYLPHSVRGWSWKRYHEK 66 Query: 54 YTLLRQYA----KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 + + + D+V L E+ + + + + + Sbjct: 67 LNRIAKVILAASREQVPDLVGLCEVENAYCLDGLV---KYSPLRDAAYRYVMTDSPDERG 123 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFC 168 I A+ + + R++ + R R + + ++G + V H+ S Sbjct: 124 IDVALLYQPSSFRLI-SDQHIRIPSYKIGRKPTRDILHVTGRVVSGDTLDVFICHMPSRS 182 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF--WK 226 + Y + + + A I Q +I GDFN K Sbjct: 183 GGEKQSEPYRLLTARVLRHAADSVMKIRQ----TPYLIIIGDFNDYPESRSVCRTLGAGK 238 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS---------- 276 DS + + + +D +++ + Sbjct: 239 PEKDIDSYRLYNLMNGRQGGTYRYRGEWGILDQLILNGTFLNHTGNLTTEFNRARILTFP 298 Query: 277 -----------EILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + SDH P+ +D D Sbjct: 299 FLLEEDENYGGDKPFRTYNGMKYHGGYSDHLPVCVDID 336 >gi|254581358|ref|XP_002496664.1| ZYRO0D05302p [Zygosaccharomyces rouxii] gi|238939556|emb|CAR27731.1| ZYRO0D05302p [Zygosaccharomyces rouxii] Length = 857 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 40/327 (12%), Positives = 86/327 (26%), Gaps = 42/327 (12%) Query: 20 VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + ++S+NI + + + L + + DIV LQE+ + Sbjct: 520 AKRSFTIMSYNILCQHYATPKMYRYTPSWALSWDHRRQRLTEEVMSYMTDIVCLQEVEAK 579 Query: 78 NAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 P + ++ R +DS + ++ ++ + + Sbjct: 580 TYEEHWAPLMLKQGYSGVFHAKTRAKTMHSKDSKKVDGCCVFYKESEFKLQFKDEVDFSS 639 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-----DSLENTYSPSCSLLSQQA 188 + R L +N + + + + + + Q Sbjct: 640 TWMKHKKFQRTEDYLNRAMNKDNVVIYIKLNHLKSGESVWIATTHLHWDPQFNDVKTFQV 699 Query: 189 QWLKDWITQ-----------KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 L D + + + P +I GDFN + + + + + Sbjct: 700 GILMDHLEELIKEHGSPSSRQDPKKSPVIICGDFNSQKDSAVYELLSTGHVQSHKDIDGR 759 Query: 238 PKEKDSRCN-------------------ANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277 S+ N N IDY Q + + Sbjct: 760 DFGYMSQKNFAHNLSLKSGYGYIGELPLTNFTPSFTSTIDYIWFSTQALRIRGLLGEIDD 819 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ K SDH PI ++F Sbjct: 820 DYISKFIGFPNDKFPSDHIPILARFEF 846 >gi|160874973|ref|YP_001554289.1| PKD domain-containing protein [Shewanella baltica OS195] gi|160860495|gb|ABX49029.1| PKD domain containing protein [Shewanella baltica OS195] gi|315267207|gb|ADT94060.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS678] Length = 944 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 48/333 (14%), Positives = 99/333 (29%), Gaps = 50/333 (15%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDAD 67 + T +++ S+N+ +G + + + + AD Sbjct: 450 IAPTLVEGGNLKVASFNVLNYFNGDGQGAGFPTARGANTLSEFERQKAKIVSAMVGISAD 509 Query: 68 IVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKN 120 + L E+ + +A+A + + + I + + I + R Sbjct: 510 VFGLMEIENDGFGANSAIADLVAGLNAAVGEARYAYIAPTGMNAIGTDAITVGLIYRSDK 569 Query: 121 V-------RVLQQSYPLLGA-KDSFSRAGNRRAVELLVEINGKK--IWVLDIHLKSF--- 167 V + + PL K F + NR + +NG + + V HLKS Sbjct: 570 VTPQGAARILSSANSPLDSDQKPLFDDSKNRPMLTQAFSVNGSEEGVVVAVNHLKSKGSE 629 Query: 168 CFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 C D N +C+ ++ A WI+++ ++ GD N Sbjct: 630 CAGDPDLNDGQGNCNITRTRAATAAGQWISEQYP-DQGVLLIGDLNAYAKEDP-----LT 683 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + F K + + +D+ + + ++ + I +E + Sbjct: 684 ALGNAGFSELFAKLEKPNPYSYVFSAESGQLDHALANAALLDKVVDVTEWHINTDEPRVL 743 Query: 287 SRG-----------------KRLSDHCPISIDY 302 R SDH P+ I Sbjct: 744 DYNEEFKTPAQIQDLFATDAYRSSDHDPVVISL 776 >gi|270295490|ref|ZP_06201691.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270274737|gb|EFA20598.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 254 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 34/286 (11%), Positives = 75/286 (26%), Gaps = 43/286 (15%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 +++N+ + V+ W + D++ +QE+ Sbjct: 1 MTFNVRLDIPSDSVNNWNYRKGDA-------CRMIAYYSPDLLGMQEVLHNQMEDLKRGL 53 Query: 87 NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146 + + T + P + + NR Sbjct: 54 PQYTALGVGRDDGKEAGEYCPIFFRTDRFTLVEYGNFSLSEQPETIGIKGWDASYNRVTT 113 Query: 147 ELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ + NG+K + HL + + L+ + + + +P Sbjct: 114 WAILQEKNNGQKFVYFNTHL-----DNDGKTARKEGVQLILDKIKEIA--------PGMP 160 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-------KIPI 257 +I GDFN +T++ + + ++ + Sbjct: 161 AIITGDFNCTPGEEP-----LQTLEKGGMENAAKTAAVTYGPSWSFHDFGRLPVEERVLL 215 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 DY + + Y K LSDHCPI ++ Sbjct: 216 DYVFVTK---------GAKIDRYRVIQDKPENSYLSDHCPILVELT 252 >gi|218438570|ref|YP_002376899.1| endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424] gi|218171298|gb|ACK70031.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424] Length = 285 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 104/308 (33%), Gaps = 45/308 (14%) Query: 5 YVLALVFFLVPCTASV---AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 LA+ F L CT ++ A + ++S+N+ + + + D +R Sbjct: 12 ICLAICFTLASCTYALPMKAAPLTVMSYNVE------SDDINDTNPRLVAEDIERIR--- 62 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 N+ DI L E+ + A T+ + + + T A + + V Sbjct: 63 SNMPIDIWGLSEVLNQEAAD-----------IFTDAISSPDTEYRSILGTTGGADQLQIV 111 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 ++ L+ ++ + G R + E+ G L + Sbjct: 112 Y-NPETVRLIDTQELRNSGGTRAPLVAHFELLGNGREFLFTVNHFNRGDED--------- 161 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFN--RKINYLGNNDDFWKTIDPNDSLI---- 235 +QQA++L++W E +P V GD+N N+ F ++ + + Sbjct: 162 -RRNQQARFLREW---GAEQTLPIVAVGDYNFDYDPQTQSGNEAFDIFLEDDTFIWIRPE 217 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 N +D+ + + A ++ +L +E + + SDH Sbjct: 218 CLADNSCPPTGTQCNPTYNSILDFVFVSERATQW--DNISDILLIDEPVCEKESRGYSDH 275 Query: 296 CPISIDYD 303 P+ +D Sbjct: 276 RPVVASFD 283 >gi|27367041|ref|NP_762568.1| putative phospholipase C [Vibrio vulnificus CMCP6] gi|27358609|gb|AAO07558.1| Putative phospholipase C [Vibrio vulnificus CMCP6] Length = 442 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 44/291 (15%), Positives = 87/291 (29%), Gaps = 36/291 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 Q ++++++NI L + L+ Y K D++ LQE+ + A Sbjct: 176 QHLKIMTYNIWALPAIASHIG---------ERFELIPDYVKGY--DVLALQEVFANGRDA 224 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + I I R V Q +P D F+ Sbjct: 225 FLRELAKEYPYQTKMLDKDGFNIYDGGVI---IVSRYPIVNQAQFVFPDCTGTDCFADK- 280 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 V G+ V H S+ + + +Q + L + + Sbjct: 281 --GVNYAEVIKGGEAYHVFATHTASYDTDTARDYRQRQ-----FKQMRALAQSLK--IPA 331 Query: 202 LVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--------- 251 V +GDFN + + + + + +S + N Sbjct: 332 NETVVYSGDFNVNKRKFPSDYQQMIANLSAIEPH--YSGYTESTFDPRINNFAGEPLSGG 389 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +DY ++ + +I + + + LSDH P+S Sbjct: 390 ENVEYLDYVMVSNEYAVKGDNNNHVDIPRSTAESLWKHYNLSDHFPVSTVI 440 >gi|320160160|ref|YP_004173384.1| hypothetical protein ANT_07500 [Anaerolinea thermophila UNI-1] gi|319994013|dbj|BAJ62784.1| hypothetical protein ANT_07500 [Anaerolinea thermophila UNI-1] Length = 1278 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 45/329 (13%), Positives = 89/329 (27%), Gaps = 48/329 (14%) Query: 16 CTASVAQKVRLVSWNINTLS--------------EQEGVSLWKNSVKRTTSDYTLLRQYA 61 + +++ + N+ +S T + + Sbjct: 617 VSTGENGTLKVAAMNVLNYFVTLDQTPYPAGSPYNTNNTPRGADSAAEFTRQQEQIVRAL 676 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPK----NTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 LDAD+V L E+ S+ V NT+ + + + N+ I A+ + Sbjct: 677 AGLDADVVGLIEIESWTGADAVNNLVNALNTYLGSTVYAAVPDPATGVGNDAIKVALIYK 736 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 V + S A R A + G+ V+ H KS + Sbjct: 737 TATVERVGDSLSTGAAPFDLYRYPV--AQAFREKTTGEVFTVVINHFKSKSCSGTPTGGD 794 Query: 178 SP-------SCSLLSQQAQWLKDWITQKK---ESLVPFVIAGDFNRKINYLGNNDDFWKT 227 + + + L +WI ++ GDFN T Sbjct: 795 ADLGEGAGCYNATRVAMSNTLLNWINNTLIPTTGDPDVIVMGDFNAYGAEAPIL-----T 849 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 ++ + + + + +D+ + + + I +E + Sbjct: 850 LENGGLVNMGKQYEGVNTYSYVFDGMAGALDHLFVTSSLADEVTGAGHWHINADEPSVID 909 Query: 288 RG-------------KRLSDHCPISIDYD 303 R SDH PI + D Sbjct: 910 YNTEFKTVDLYQPHPYRSSDHDPILVGLD 938 >gi|238788459|ref|ZP_04632252.1| Exodeoxyribonuclease III [Yersinia frederiksenii ATCC 33641] gi|238723372|gb|EEQ15019.1| Exodeoxyribonuclease III [Yersinia frederiksenii ATCC 33641] Length = 271 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 38/310 (12%), Positives = 78/310 (25%), Gaps = 73/310 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ VS+NIN L + L + D++ LQE Sbjct: 3 TMKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDD 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 +FP + H +A+ K + + +D+ Sbjct: 44 MFP-------LEDVSQHGYHVFYHGQKGHYGVALLTKQEPLAVRRGFPSDEEDA-----Q 91 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 RR + + + V++ F + + L+ ++ Q+ + Sbjct: 92 RRIIMADIATPQGTLTVIN-----GYFPQGESRDHPTKFPAKERFYADLQQYLEQQLSAD 146 Query: 203 VPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 +I GD N L + + + + F Sbjct: 147 AQILIMGDLNISPTDLDIGIGEESRKRWLRTGKCSFLPEERAWLERLQSWGLVDTFRAAN 206 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID + Q I D ++ Sbjct: 207 PDCNDQFSWFDYRSRGFDENRGLRIDLLLASQPLAARCIATGI-------DYKIRGMEKP 259 Query: 293 SDHCPISIDY 302 SDH P+ ++ Sbjct: 260 SDHAPVWSEF 269 >gi|126174046|ref|YP_001050195.1| PKD domain-containing protein [Shewanella baltica OS155] gi|125997251|gb|ABN61326.1| PKD domain containing protein [Shewanella baltica OS155] Length = 944 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 49/333 (14%), Positives = 100/333 (30%), Gaps = 50/333 (15%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDAD 67 + T +++ S+N+ +G + + + + AD Sbjct: 450 IAPTLVEGGNLKVASFNVLNYFNGDGQGAGFPTARGANTLSEFERQKAKIVSAMVGISAD 509 Query: 68 IVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKN 120 + L E+ + +A+A + + + I + + I + R Sbjct: 510 VFGLMEIENDGFGANSAIADLVAGLNAAVGEARYAYIAPTGMNAIGTDAITVGLIYRSDK 569 Query: 121 V-------RVLQQSYPLLGA-KDSFSRAGNRRAVELLVEINGKK--IWVLDIHLKSF--- 167 V + + PL K F + NR + +NG + + V HLKS Sbjct: 570 VTPQGAARILSSANSPLDSDQKPLFDDSKNRPMLTQAFSVNGSEEGVVVAVNHLKSKGSE 629 Query: 168 CFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 C D N +C+ ++ A WI+++ ++ GD N Sbjct: 630 CAGDPDLNDGQGNCNITRTRAATAAGQWISEQYP-DQGVLLIGDLNAYAKEDP-----LT 683 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + F K + S + +D+ + + ++ + I +E + Sbjct: 684 ALGNAGFSELFAKLEKSNPYSYVFSAESGQLDHALANAALLDKVVDVTEWHINTDEPRVL 743 Query: 287 SRG-----------------KRLSDHCPISIDY 302 R SDH P+ I Sbjct: 744 DYNEEFKTPAQIQDLFATDAYRSSDHDPVVISL 776 >gi|254526744|ref|ZP_05138796.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9202] gi|221538168|gb|EEE40621.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9202] Length = 281 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 91/301 (30%), Gaps = 63/301 (20%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + +WN+N + + + + ++ DI+ LQE + FP Sbjct: 3 IATWNVN----------------SIRTRLSQIIDWINQVNPDILCLQE---TKVMDDSFP 43 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + ++ + +A+ K + G + + Sbjct: 44 TEPF-------EKLGYAVEVYGQKSYNGVAIISKTKPENVKKG-FYGCTNFNQNIEIFQD 95 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + L+ + I ++++++ + L+S + Y L ++ ++++ Sbjct: 96 QKRLISADINNIKIINVYVPNGSSLESSKFEYK------INWLNCLGSFLDEQEKKGELI 149 Query: 206 VIAGDFNRKINYLGNNDD-------FWKTIDPND-------SLIRFPKEKDSRCNANKNL 251 + GDFN + L +D I+ N LI + + Sbjct: 150 CLLGDFNIAPSNLDIHDPKKYEGGIMASEIERNALNNVLKKRLIDSFRIFEQNTGHWSWW 209 Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ + + L D R SDH P+ ID Sbjct: 210 DYRNNAFELNKGWRIDHIYISKELSSKLKSCVI-------DCSPRGYLRPSDHAPVMIDL 262 Query: 303 D 303 + Sbjct: 263 N 263 >gi|332880309|ref|ZP_08447987.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681754|gb|EGJ54673.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 336 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 41/320 (12%), Positives = 93/320 (29%), Gaps = 48/320 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNS-----------VKRTTSDYTLLRQYAKNLD----A 66 Q R++ +N+ L + SL ++ R L + + Sbjct: 24 QPFRVMFYNVENLFDCRHDSLKEDREFLPDGEKKWTPSRYWRKLDALSKVVAAVGEERLP 83 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D+V L E+ + + + F + + I A+ + + R+L + Sbjct: 84 DLVGLCEVENDSVL---FDLTRRSSLRALGYRYVATHSPDVRGIDVALLYQPGSFRLL-E 139 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 S+ + R + + E+ +G + VL HL S + + + Sbjct: 140 SHEIPVPSAEAGFRPTRNVLYVKGEVLSGDTLHVLVCHLPSRLGATRVSRRHRMLAART- 198 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + + D + S + GDFN + + + Sbjct: 199 --VRAVADSVRT-ATSDARILWMGDFNADVEDRVFREVVFPYFREPGLSPFCADGVRG-- 253 Query: 246 NANKNLRNKIPIDYFVMDQ----NAYKFLIQESFS-----------------EILYNEDD 284 + + ID+ ++ N+ F + + Sbjct: 254 -SYRYRGIWETIDHILVSPVLMDNSRPFHTSDGCRAIVAFPFMCEREKTYGGVRPFRTYQ 312 Query: 285 IKSRGKRLSDHCPISIDYDF 304 SDH P+++D+++ Sbjct: 313 GPLYKGGYSDHFPVTLDFEW 332 >gi|163740897|ref|ZP_02148290.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter gallaeciensis 2.10] gi|161385888|gb|EDQ10264.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter gallaeciensis 2.10] Length = 339 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 60/335 (17%), Positives = 106/335 (31%), Gaps = 49/335 (14%) Query: 18 ASVAQKVRLVSWNINTL----SEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIV 69 ++ A +RLV++N+ + + + + R D L Q K+LDAD + Sbjct: 3 STDAVAMRLVTYNVEWFSSLFGADDRLLMDGGTSGRHGVDRDRQARALAQVFKHLDADGI 62 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQS- 127 + E N K + R ++ A K +RV Sbjct: 63 MVIEAPDTNNRRKTLRALEHFAKEAGLRSTEAVIGFANDTQQEIAFLYDPKVLRVAHTPG 122 Query: 128 -------------YPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSL 173 L + ++ +EL V NG ++I ++ HLKS + Sbjct: 123 DSDEAPRFDGVFHIDLDVDAQKDAVRFSKPPLELTVTTNGGREISLIGAHLKSKAPHGAR 182 Query: 174 ENTYS-----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-- 226 ++ + QA WL+ + Q ++ GD N F + Sbjct: 183 SEDHAVTLSIANRRKQLAQAIWLRRRVEQLLAEGRDVMVMGDLNDGPGLDQYEQLFNRSS 242 Query: 227 --------TIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYK----F 269 DPN + P+ + +A +DY ++ + + Sbjct: 243 VEIVMESDLYDPNAQSLLQPRLRVMPSSARFYDKANKRYFSALLDYIMVSSGLRQPAASW 302 Query: 270 LIQESFSEILYNEDDIKSRG-KRLSDHCPISIDYD 303 I F + ED SDH P+S+D D Sbjct: 303 RIWHPFEDAACYEDVALREALLAASDHFPVSLDLD 337 >gi|148548014|ref|YP_001268116.1| exonuclease III [Pseudomonas putida F1] gi|148512072|gb|ABQ78932.1| Exodeoxyribonuclease III [Pseudomonas putida F1] Length = 270 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 35/313 (11%), Positives = 82/313 (26%), Gaps = 76/313 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V +NIN L + L + D++ LQE + Sbjct: 1 MKIVCFNINGL----------------RARPHQLAALIEKHQPDVIGLQETKVSDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + H +A+ + + +D+ R Sbjct: 41 ------QFPLADVQALGYHVHYHGQKGHYGVALLSRQAPLSLHKGFATDEEDA-----QR 89 Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + NG I +++ F + + L+ + + + Sbjct: 90 RFIWGTFADANGSPITIMN-----GYFPQGESRDHPTKFPAKQRFYSDLQALLESQFRND 144 Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241 P ++ GD N ++L ++ + + + F Sbjct: 145 QPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSFLPEEREWMERLKGWGLVDSFRHLY 204 Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + Q + D + Sbjct: 205 PEVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQPLVPRIKAAGV-------DYELRGME 257 Query: 291 RLSDHCPISIDYD 303 + SDH PI ++ Sbjct: 258 KPSDHAPIWLELS 270 >gi|148825679|ref|YP_001290432.1| exonuclease III [Haemophilus influenzae PittEE] gi|148715839|gb|ABQ98049.1| exodeoxyribonuclease III [Haemophilus influenzae PittEE] Length = 267 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 87/311 (27%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + D++ LQE + Sbjct: 1 MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEAFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + +F+ H +A+ K + +D+ R Sbjct: 45 EITENLGYHVFHH------------GQKGHYGVALLTKQEPKAVRRGFSTDNEDAQKR-- 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +E + V++ F T+ + L+ ++ ++ + Sbjct: 91 ---IIMADLETEFGLLTVIN-----GYFPQGESRTHETKFPAKEKFYADLQQYLEKEHDK 142 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 P +I GD N + L +++ + F K Sbjct: 143 SNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEERAWYQRLYDYGLEDSFRKL 202 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + ID+ ++ Q + + ++ Sbjct: 203 NPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAERCVDVGI-------ALDIRAMEK 255 Query: 292 LSDHCPISIDY 302 SDH PI ++ Sbjct: 256 PSDHAPIWAEF 266 >gi|313148526|ref|ZP_07810719.1| endonuclease/exonuclease/phosphatase family [Bacteroides fragilis 3_1_12] gi|313137293|gb|EFR54653.1| endonuclease/exonuclease/phosphatase family [Bacteroides fragilis 3_1_12] Length = 365 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 44/349 (12%), Positives = 91/349 (26%), Gaps = 57/349 (16%) Query: 1 MIRKYVLALVFFLVPCTASVAQK-VRLVSWNINTLSEQEGVSLWKNSV-----------K 48 M+R + L L+ ++ Q R+V WN + SL + Sbjct: 22 MLRLFFLLLISSTSLFLSAQNQPPFRVVFWNTENFFDTRHDSLKNDREFLPHSLRHWGYS 81 Query: 49 RTTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104 R + + + ++ L E+ + + + + + + Sbjct: 82 RYKKKIDNVARTLAAVGEWNFPVLIGLCEVENDTVMRDL---TLYSPLKEADYRYVMTHS 138 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIH 163 I A+ ++ ++L + + + + R + + + + G + VL H Sbjct: 139 SDQRGIDVALLYQRDRFKLL--TCSSIPVGNFENHRPTRDILHVSGLLLTGDTLDVLVAH 196 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNN 221 L S S AQ LK+ +I GDFN Sbjct: 197 LPSRSGG------ARQSEPYRLFAAQKLKNAADSLMCVRRSAKLIIMGDFNDYPTDKSVK 250 Query: 222 DDFWKTIDPNDSLI------RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + K K+ + K +D+ ++ Sbjct: 251 QVLKALSPEENPDHKQLYHLLARKAKNRNFGSYKYQGEWGLLDHLIVSGTLLDTSGTLFT 310 Query: 276 SEI---------------------LYNEDDIKSRGKRLSDHCPISIDYD 303 E + SDH P+ D++ Sbjct: 311 EEKKASVLRLPFLLIKDEKYGGMQPFRTYIGMKYQGGYSDHLPVYTDFE 359 >gi|188591189|ref|YP_001795789.1| metal dependent endonuclease/phosphatase [Cupriavidus taiwanensis LMG 19424] gi|170938083|emb|CAP63067.1| putative metal dependent endonuclease/phosphatase [Cupriavidus taiwanensis LMG 19424] Length = 260 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 99/286 (34%), Gaps = 51/286 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---- 78 K+R+V++NI+ + +R +DADIVFLQE+ N Sbjct: 2 KLRVVTYNIH----------KGVTGIARRPRIQNVRAGLHAMDADIVFLQEVQDRNDRLV 51 Query: 79 AVAKVFPKNTWCIFYS--TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 A A P++T + + + + + H A+ ++ ++ ++ + S Sbjct: 52 AAALFDPEHTQLNYLATDAYPHSVYGRNAVYDYGHHGNAILSRHPILMSENLDI-----S 106 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R R + + +++G + ++ +H F ++QA+ L + + Sbjct: 107 DHRFEQRGLLHAVADVHGVETHLICVHFGLF-------------ARSRARQAEALVERVK 153 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + VP VIAGDFN + I + + +R + + Sbjct: 154 NVVPADVPLVIAGDFNDWNHR------LDAQICNTLGAVEASHARGARLHTFPSHMPWWQ 207 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + EI + SDH P+ + Sbjct: 208 LDRIYVRG-----------YEIERAHALTGRDWAQRSDHVPLVAEL 242 >gi|319896463|ref|YP_004134656.1| exodeoxyribonuclease iii [Haemophilus influenzae F3031] gi|317431965|emb|CBY80313.1| exodeoxyribonuclease III [Haemophilus influenzae F3031] Length = 267 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 34/311 (10%), Positives = 87/311 (27%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + D++ LQE + Sbjct: 1 MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEAFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + +F+ H +A+ K + + + + Sbjct: 45 EITENLGYHVFHH------------GQKGHYGVALLTKQEPKVVRR-----GFPTDNEGA 87 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R + +E + V++ F + + L+ ++ ++ + Sbjct: 88 QKRIIMADLETEFGLLTVIN-----GYFPQGESRAHETKFPAKEKFYADLQQYLEKEHDK 142 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 P +I GD N + L +++ + F K Sbjct: 143 SNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEERAWYQRLYDYGLEDSFRKL 202 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + ID+ ++ + + + ++ Sbjct: 203 NPTANDKFSWFDYRSKGFDDNRGLRIDHILVSRKLAERCVDVGI-------ALDIRAMEK 255 Query: 292 LSDHCPISIDY 302 SDH PI ++ Sbjct: 256 PSDHAPIWAEF 266 >gi|182414371|ref|YP_001819437.1| endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] gi|177841585|gb|ACB75837.1| Endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] Length = 257 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 96/288 (33%), Gaps = 44/288 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 VRLV++NI + + ++ ++ + + L D+V LQE+ + A Sbjct: 4 VRLVTFNIAHGRGLAPIQGLT-TPQKLKANLRKIARLIGELKPDVVALQEVDERSLWAGN 62 Query: 84 FPKNTWCIFYSTERL---INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 F + ++ H++R ++ A+ + ++ R Sbjct: 63 FDHLEYLRLHAGFEHAVFGIHNRRAGLLNLSYGNALLSRYPISYSETVVF-----GQRRV 117 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 G + + +++ G+ + ++++HL S +Q L W+ +K+E Sbjct: 118 GEKGFLFAEIDVAGRVMPLVNVHLHF------------SSREHRIRQIGRLLAWLREKQE 165 Query: 201 SLV-----PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 P ++ GD N + + P + + Sbjct: 166 HSRGRWRVPAIVCGDLNNPGTSADATAALLSHLSDYGEYVLHPTKG----RTFPSPLPGR 221 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D+ + S EI+ LSDH P+++D+ Sbjct: 222 LLDFVFLPGA-----CNASHCEIVRC---------FLSDHRPVAVDFT 255 >gi|325982581|ref|YP_004294983.1| exodeoxyribonuclease III Xth [Nitrosomonas sp. AL212] gi|325532100|gb|ADZ26821.1| exodeoxyribonuclease III Xth [Nitrosomonas sp. AL212] Length = 261 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 86/302 (28%), Gaps = 72/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N+L + + D++ LQE+ K+ Sbjct: 3 MKLATWNVNSL----------------KVRLPQVIDWLVAHQPDVLCLQEI-------KL 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 +N + + + + + +A+ K + + + Sbjct: 40 INEN---FPINEIKAAGYESVFAGQKTYNGVAILSK------RQGSNIVTAIPGLADEQK 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + V+ ++ + ++S + Y W+ Q+ Sbjct: 91 RVIAATY----GDLRVICAYVPNGENVESEKYEYK------LCWLPAFTQWLKQELIDYK 140 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249 + GDFN D K + N L + + + Sbjct: 141 RLAVLGDFNIAPEDRDVYDAELWKGKVLCSEPERSAFGNMLNLGLADSFRLFEQPEKSYT 200 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ + + + D + +R SDH P+ + Sbjct: 201 WWDYRMLAFRRNQGLRIDHILLSEELCNACVTCAI-------DKTMRKLERPSDHAPVLV 253 Query: 301 DY 302 + Sbjct: 254 EL 255 >gi|318042025|ref|ZP_07973981.1| exodeoxyribonuclease III [Synechococcus sp. CB0101] Length = 276 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 92/307 (29%), Gaps = 69/307 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ SWN+N + + + + D++ LQE ++ Sbjct: 1 MRIASWNVN----------------SVRTRLDQVLAWLETEQPDVLCLQE---TKVADQL 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ---SYPLLGAKDSFSRA 140 FP + + + S + +A+ + Q S L D+ + Sbjct: 42 FPS-------AAFEQMGYHCAISGQKAYNGVALISRLPLDDVQIGFSALLPDDPDAPELS 94 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +R + LV+ + VL++++ + L S + TY + LK ++ + + Sbjct: 95 EQKRVISALVD----GVRVLNLYVPNGSSLSSDKYTYKLA------WLACLKRYLAVQHD 144 Query: 201 SLVPFVIAGDFNRKINYLGNND------------DFWKTIDPN--DSLIRFPKEKDSRCN 246 P + GDFN +D + + L + + Sbjct: 145 QGDPLCMVGDFNIGPEARDLHDPDRLSGGIMATDAERQALSDALAGRLTDVFRVFEPGSG 204 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ + + D + SDH P Sbjct: 205 HWSWWDYRSGAWDRDQGWRIDHIYLSEELLDCATGCVI-------DKTPRGNTQPSDHAP 257 Query: 298 ISIDYDF 304 + ++ + Sbjct: 258 VVVNLAW 264 >gi|149911488|ref|ZP_01900104.1| putative phospholipase C precursor [Moritella sp. PE36] gi|149805452|gb|EDM65460.1| putative phospholipase C precursor [Moritella sp. PE36] Length = 429 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 47/293 (16%), Positives = 92/293 (31%), Gaps = 34/293 (11%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + A ++++S+N+ L + + ++ K D++ LQE+ + Sbjct: 161 ADADTLKVMSYNVWALPVIAKHIGD---------RFQEIPKHLKGY--DVLMLQEVFASG 209 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 F ++ + +++++ + + I R V Q YP D F+ Sbjct: 210 --RDAFLRDLAKEYPYQTKMLDYPGINVYDGG-VTIVSRYPIVNEGQYVYPDCSGTDCFA 266 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT-Q 197 V NGK V H SF + + Q + ++D+ Q Sbjct: 267 DK---GVNYAEVIKNGKAYHVFATHTASFDTDTARDYRQR--------QFRQMRDFAQAQ 315 Query: 198 KKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-- 254 V GDFN + + + + + ++ E N N Sbjct: 316 NIPVTDTVVYGGDFNVNKLKFPTDYQQMFANLSADEPQYAGYTESTFDPRINAYAGNALS 375 Query: 255 -----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +DY V+ K + +I + LSDH P+ Sbjct: 376 GGENIEYLDYVVVSNEFAKRNENINTVKIPRTTVASLWKHWNLSDHFPVKAVI 428 >gi|227326084|ref|ZP_03830108.1| exonuclease III [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 268 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 36/310 (11%), Positives = 80/310 (25%), Gaps = 73/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L + D++ LQE ++ + + Sbjct: 1 MKVVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQETKVHDDMFPL 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K + + D+ R Sbjct: 45 EDVGQY----------GYHVYYHGQKGHYGVALLCKEQPIAVRRGFPTDEDDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + V++ F + ++ Q L+ ++ Q + Sbjct: 90 RIIMADFATEHGTLTVVN-----GYFPQGESRDHPVKFPAKTRFYQDLQTYLEQHHSATQ 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P ++ GD N L ++ + + F Sbjct: 145 PLIVMGDVNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMARLQDWGLIDTFRAANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + + D ++ S Sbjct: 205 DSNDRFSWFDYRSAGFDDNRGLRIDLILASTFLAERCVATGI-------DYDIRGMEKPS 257 Query: 294 DHCPISIDYD 303 DH PI + Sbjct: 258 DHAPIWAQFS 267 >gi|310799683|gb|EFQ34576.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola M1.001] Length = 307 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 89/307 (28%), Gaps = 16/307 (5%) Query: 2 IRKYVLALVFFLVPCTA--SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 ++ + A + A + + +RL+++NI + R L Sbjct: 1 MKASMTAAMLLGAAGVACQTTSLTLRLMTYNIRW-ATPVAGPNEAYWSTRRPRLTAQLNY 59 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 ++ +QE+ + W + S Sbjct: 60 ETAGRPESLLCMQEVVEQQLLDIAQDLGPAWAHVGVGRDDGAAAGEFSPIFYRPDTWDLV 119 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 +N P + + A R A + ++ + F + Sbjct: 120 ENRTYWLSETPDVPGSRGWDAALPRIATVASFRHAATGLPLVYMCTH---FDHEGQTARE 176 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 S LL + A+ + + +++ VP + GD N + + + + S + Sbjct: 177 RSAELLVRLAKG-WESGSGPEDTAVPVFLGGDLNVEPDNAAYKTLVAEGNLRDASDVVPE 235 Query: 239 KEKDSRCNANKNLR----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + + + ID+ + A + + S + + DD +SD Sbjct: 236 AHRTGHSKTYTAFTDVDWDDMLIDHLFVRDPAARGIKFLSHAVLPNRFDDRL----FISD 291 Query: 295 HCPISID 301 H P+ +D Sbjct: 292 HRPVVLD 298 >gi|293392089|ref|ZP_06636423.1| exonuclease III [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952623|gb|EFE02742.1| exonuclease III [Aggregatibacter actinomycetemcomitans D7S-1] Length = 267 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 89/309 (28%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L + D++ LQE+ +V Sbjct: 1 MKIMSFNINGL----------------RARPHQLEEIIHKYQPDVLGLQEI---KVADEV 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + H +A+ K V + + +++ R Sbjct: 42 FPYDL-------VDHLGYHVNHFGQKGHYGVALLSKQVPLSVRKGFPTDDEEAQKR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +E ++ V++ F + + L+ ++ Q + Sbjct: 91 -IIMIDLETKFGQLTVIN-----GYFPQGESREHPTKFPAKQKFYADLQRYLEQDHNAQN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N + L ++++ + F Sbjct: 145 PVIIMGDMNISPSDLDIGIGEENRKRWLRTGKCSFLPEEREWYQRLYAYGLEDTFRHMNP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + + ID+ + ++ + + S Sbjct: 205 TVNDKFSWFDYRSKGFDDNRGLRIDHILANKALVAHCVDTGI-------ALDIRAMNKPS 257 Query: 294 DHCPISIDY 302 DH PI ++ Sbjct: 258 DHAPIWAEF 266 >gi|238797343|ref|ZP_04640843.1| Exodeoxyribonuclease III [Yersinia mollaretii ATCC 43969] gi|238718774|gb|EEQ10590.1| Exodeoxyribonuclease III [Yersinia mollaretii ATCC 43969] Length = 271 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 38/310 (12%), Positives = 78/310 (25%), Gaps = 73/310 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ VS+NIN L + L + D++ LQE Sbjct: 3 TMKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDD 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 +FP + H +A+ K + + +D+ Sbjct: 44 MFP-------LEDVSQHGYHVFYHGQKGHYGVALLTKEKPLAVRRGFPTDEEDA-----Q 91 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 RR + + + V++ F + + L+ ++ Q+ + Sbjct: 92 RRIIMADIATPQGPLTVIN-----GYFPQGESRDHPIKFPAKERFYADLQQYLEQQLSAD 146 Query: 203 VPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 +I GD N L + + + + F Sbjct: 147 SQVLIMGDINISPTDLDIGIGEENRKRWLRTGKCSFLPEERAWLERLQSWGLVDTFRAAN 206 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID + Q I D ++ Sbjct: 207 PDCNDQFSWFDYRSRGFDENRGLRIDLLLASQPLAARCIATGI-------DYEIRGMEKP 259 Query: 293 SDHCPISIDY 302 SDH P+ ++ Sbjct: 260 SDHAPVWSEF 269 >gi|313499091|gb|ADR60457.1| Exonuclease III [Pseudomonas putida BIRD-1] Length = 270 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 34/313 (10%), Positives = 82/313 (26%), Gaps = 76/313 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V +NIN L + L + D++ LQE + Sbjct: 1 MKIVCFNINGL----------------RARPHQLAALIEKHQPDVIGLQETKVSDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + H +A+ + + +D+ R Sbjct: 41 ------QFPLADVQALGYHVHYHGQKGHYGVALLSRQAPLSLHKGFATDEEDA-----QR 89 Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + +G I +++ F + + L+ + + + Sbjct: 90 RFIWGTFADADGSPITIMN-----GYFPQGESRDHPTKFPAKQRFYSDLQALLESQFRND 144 Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241 P ++ GD N ++L ++ + + + F Sbjct: 145 QPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSFLPEEREWMERLKGWGLVDSFRHLY 204 Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + Q + D + Sbjct: 205 PEVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQQLVPRIKAAGV-------DYELRGME 257 Query: 291 RLSDHCPISIDYD 303 + SDH PI ++ Sbjct: 258 KPSDHAPIWLELS 270 >gi|332670164|ref|YP_004453172.1| 5'-Nucleotidase domain-containing protein [Cellulomonas fimi ATCC 484] gi|332339202|gb|AEE45785.1| 5'-Nucleotidase domain-containing protein [Cellulomonas fimi ATCC 484] Length = 1651 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 96/348 (27%), Gaps = 64/348 (18%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQ----------------EGVSLWKNSVKRTTSDYT-- 55 V V++ S+N+ + V++ + R D Sbjct: 478 TASPTDVGGDVQVASFNVLNYFTTLGADTAGCVPYRDRTGDPVTVDEGCDPRGAWDPEDL 537 Query: 56 -----LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN--- 107 + LDAD+V L E+ + V V + + + Sbjct: 538 ARQQAKIVAAINALDADVVGLLEIENSAVVDGVADEALGTLVAALNAQAGAGTWAFVPSS 597 Query: 108 ---------NDIHTAIAVRKKNVRVLQQSYPLLG-AKDSFSRAGNRRAVELLVEI--NGK 155 + I A+ R V + L + D + A R + G+ Sbjct: 598 VDLPDVALQDSITNALIYRTAAVERTGDARALGSQSADGQAFANAREPIAQAFTPVGGGE 657 Query: 156 KIWVLDIHLKS-----FCFLDSLENTYSPSCSL-LSQQAQWLKDWITQKKESLVPFVIAG 209 + V+ HLKS D+ + + +QA L+DW+ + + G Sbjct: 658 PVLVVVNHLKSKGSAGPWPGDADAGDGQGASNESRVRQATALRDWVPTIQGDTEAVALVG 717 Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269 DFN + + + + + + +D+ ++++ A Sbjct: 718 DFNAYTREDP-----LQVLYDAGYVDAVQQLAPGQ-WSYTFSGLSGSLDHVLLNEAALAR 771 Query: 270 LIQESFSEILYNEDDIKSRG--------------KRLSDHCPISIDYD 303 EI E R SDH P+ + Sbjct: 772 ATGADVWEINAEESIALEYSRYNYHGTLFYADDVYRSSDHDPVVVGLT 819 >gi|1944175|dbj|BAA19649.1| exonuclease III [Aggregatibacter actinomycetemcomitans] Length = 267 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 89/309 (28%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L + D++ LQE+ +V Sbjct: 1 MKIMSFNINGL----------------RARPHQLEEIINKYQPDVLGLQEI---KVSDEV 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + H +A+ K V + + +++ R Sbjct: 42 FPYDL-------VDHLGYHVNHFGQKGHYGVALLSKQVPLSVRKGFPTDDEEAQKR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +E ++ V++ F + + L+ ++ Q + Sbjct: 91 -IIMIDLETKFGQLTVIN-----GYFPQGESREHPTKFPAKQKFYADLQRYLEQDHNAQN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N + L ++++ + F Sbjct: 145 PVIIMGDMNISPSDLDIGIGEENRKRWLRTGKCSFLPEEREWYQRLYAYGLEDTFRHMNP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + + ID+ + ++ + + S Sbjct: 205 TVNDKFSWFDYRSKGFDDNRGLRIDHILANKALVAHCVDTGI-------ALDIRAMNKPS 257 Query: 294 DHCPISIDY 302 DH PI ++ Sbjct: 258 DHAPIWAEF 266 >gi|170739229|ref|YP_001767884.1| endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46] gi|168193503|gb|ACA15450.1| Endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46] Length = 257 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 37/280 (13%), Positives = 77/280 (27%), Gaps = 40/280 (14%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL+++N+ +G + + D+V LQE+ + Sbjct: 2 LRLITYNVRRCLGTDGTLSP-----------ARIAAVLASCRPDVVALQELDVGRPRSGR 50 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + R H+ + A+ L ++ L G R Sbjct: 51 IDQAHAIAEHLGMRAHFHAALRV-MEEAYGNAILTALPSRLVRAEALPGLAGRPH-LEPR 108 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A+ +E G ++ V+ HL + + L Sbjct: 109 GALWAAIEAGGTEVQVIATHLGLRRRERARQAEALLGPRFL------------ADPGCRP 156 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 P V+ GD N + + P+ + + + +D+ + Sbjct: 157 PLVLVGDLNAVPASAAYRR-LARHLRDAQRAAGVPRRQ----RTFPSGFPLLRLDHVFVS 211 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + E + SDH P+ +D D Sbjct: 212 EGIRVRHV----------EVVRGPLARVASDHLPLLVDLD 241 >gi|221068931|ref|ZP_03545036.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni KF-1] gi|220713954|gb|EED69322.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni KF-1] Length = 254 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 50/293 (17%), Positives = 90/293 (30%), Gaps = 53/293 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 T Q +R+ ++NI+ + + L + LDADIV LQE+ Sbjct: 7 STPPEPQILRVATYNIH--------KGVQGLGPARRLEIHNLGLAVEQLDADIVCLQEVR 58 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSN------NDIHTAIAVRKKNVRVLQQSYP 129 N + + + W E L D A+ + + Q Sbjct: 59 KMNRKEEQY-FDRWPNVPQAEYLAPEGYESVYLTNAYTRDGEHGNALLSRWPVIGYQH-- 115 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 S R R + + ++I+GK++ + +HL +Q Sbjct: 116 ---EDISDHRFEQRGLLHVELDIHGKRVHSIVVHLGLIPGS-------------RVRQIA 159 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L+ +I ++ P V+AGDFN D + F E+ Sbjct: 160 LLQRFIEREVPPNAPLVVAGDFN---------DWGNQIKRMLAGFGLFEYEETQGILTYP 210 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D+ + L R+SDH P+ ++ Sbjct: 211 SRLPIAQLDHIYVRG-----LTPLGLQV------PKGRIWWRMSDHLPLIAEF 252 >gi|319900045|ref|YP_004159773.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] gi|319415076|gb|ADV42187.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] Length = 295 Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats. Identities = 50/323 (15%), Positives = 97/323 (30%), Gaps = 61/323 (18%) Query: 1 MIRKYV-LALVFFLVPC-------TASVAQ---KVRLVSWNINTLSEQEGVSLWKNSVKR 49 M ++ L F L+ C + + S+NI + ++ V+ W N Sbjct: 7 MKKQLYSLLFFFVLLSCGGEGFAMSPAKGDGKTTFVAASFNIRMDTPKDSVNAWPNRK-- 64 Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 L++ + D DI +QE + + + N + + ++ Sbjct: 65 -----ELVKALVRFHDFDIFGVQEAFRHQ-LDGILELNEYAGI-------GEGRDGNDEG 111 Query: 110 IHTAIAVRKKNVRVLQQ------SYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLD 161 H+AI +K +L + P + NR + N GK+ + + Sbjct: 112 EHSAIIYKKSRFTLLDKGDFWYSETPDRIGLGWDATCCNRICSWGKFKENKTGKEFYFFN 171 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 H F S LL ++ + + P GD+N + Sbjct: 172 SH-----FDHQGVVARRESSKLLLKKIREIA--------GNTPAFSTGDYNATPDSEPIR 218 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN----KIPIDYFVMDQNAYKFLIQESFSE 277 + DS + + + + IDY + + Sbjct: 219 IIVSDGL-LKDSYTLSEQAPYGTVGTYQGFKRLANSQSRIDYVFVTKE---------VRI 268 Query: 278 ILYNEDDIKSRGKRLSDHCPISI 300 + Y + GK SDH P+ + Sbjct: 269 LKYGTLNEVPNGKFPSDHFPVMV 291 >gi|323494242|ref|ZP_08099354.1| hypothetical protein VIBR0546_06792 [Vibrio brasiliensis LMG 20546] gi|323311405|gb|EGA64557.1| hypothetical protein VIBR0546_06792 [Vibrio brasiliensis LMG 20546] Length = 316 Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 109/311 (35%), Gaps = 29/311 (9%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + + + N+ E G + + +Q LDAD+V LQE+ S Sbjct: 5 KTLSFATANLFNFVEPPGAFYDFENIYEREAWQEKCRWTQQQLSQLDADVVGLQEVFSIE 64 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP--LLGAKDS 136 A ++ + + ++T + + AIA R + + P + + Sbjct: 65 ATRELMAQIGYP-HFATVDSPAIEQEYIYSKPVVAIASRYPISHISPVTPPKEMSQGYQT 123 Query: 137 FSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENT-------YSPSCSLLSQQA 188 + +R+ ++ ++++ ++ V HLKS +SLE S +A Sbjct: 124 QLPSFSRQPIQAIIDVPDIGEVAVYVCHLKSQRATESLEAELEQPLIGRWLSAQQRGWEA 183 Query: 189 QWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKT--------IDPNDSLIRFPK 239 L+ +I Q + +P V+ GDFN+ I+ + + + L + Sbjct: 184 LMLRLFIQQQYQTHPIPTVLMGDFNQAISSDITGLLTQEVELQGNPLMLKDSWRLFQLTH 243 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN------EDDIKSRGKRLS 293 R + + +DY ++ Q + Y + + K+ S Sbjct: 244 PDAERQPTHYHFATGNILDYILLSQEFHPDSQYSLADVTDYRALDKHLINPSFEQDKQAS 303 Query: 294 DHCPISIDYDF 304 DH +++ F Sbjct: 304 DHAFVAVTVRF 314 >gi|145641817|ref|ZP_01797392.1| exodeoxyribonuclease III [Haemophilus influenzae R3021] gi|145273439|gb|EDK13310.1| exodeoxyribonuclease III [Haemophilus influenzae 22.4-21] Length = 267 Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 87/311 (27%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + D++ LQE + Sbjct: 1 MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEAFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + +F+ H +A+ K + + +D+ R Sbjct: 45 EITENLGYHVFHH------------GQKGHYGVALLTKQEPKVIRRGFPTDNEDAQKR-- 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +E + +++ F + + L+ ++ ++ + Sbjct: 91 ---IIMADLETEFGLLTIIN-----GYFPQGESRAHETKFPAKEKFYADLQQYLEKEHDK 142 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 P +I GD N + L +++ + F K Sbjct: 143 SNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEERAWYQRLYDYGLEDSFRKL 202 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + ID+ ++ Q + + ++ Sbjct: 203 NPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAERCVDVGI-------ALDIRAMEK 255 Query: 292 LSDHCPISIDY 302 SDH PI ++ Sbjct: 256 PSDHAPIWAEF 266 >gi|332828522|gb|EGK01222.1| hypothetical protein HMPREF9455_02414 [Dysgonomonas gadei ATCC BAA-286] Length = 263 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 92/314 (29%), Gaps = 66/314 (21%) Query: 1 MIRKY---VLALVFFLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54 M + + V L+ +AQ +++++ +N+ + Sbjct: 1 MKKIFNFRVYILIILSFSAVNLLAQDKVQLKVLCYNLRFG---------------ELASL 45 Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN----HSKRDSNNDI 110 ++ K + DIV LQE+ + +N + + Sbjct: 46 EEFAEFIKKENPDIVALQEVDVNTLRTRAPHQNGKNFISELAFRTGMLSLYGRTIDYAGG 105 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCF 169 + I + K Q L + R + +VE++ GK I HL Sbjct: 106 YYGIGILSKYPISQSQRIFLPMPE---GAKERRALLTGVVELSEGKSITFACTHLDYTTS 162 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 ++ Q ++ + + + P ++ GDFN + + + + Sbjct: 163 ------------AVRRAQVDFINQQLMKIE---TPVILCGDFNARPDSDEIANGMKNWM- 206 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + K IDY + + +S++ + Sbjct: 207 -----QVSTMDFTIPAKS-----PKSKIDYIFCYPASNVWKTVDSYTPVT---------- 246 Query: 290 KRLSDHCPISIDYD 303 +LSDH PI Sbjct: 247 -QLSDHLPIITTLT 259 >gi|332828694|gb|EGK01386.1| hypothetical protein HMPREF9455_02219 [Dysgonomonas gadei ATCC BAA-286] Length = 305 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 36/321 (11%), Positives = 80/321 (24%), Gaps = 44/321 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K + VF + + AQ + + S+NI ++ + ++ + Sbjct: 1 MKKTISLSVFVFLCVSFIYAQDLVVGSYNIRYNNQGDAEKGNG-----WQRRCPVITKLI 55 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 D DI+ QE+ + + + I +K Sbjct: 56 SFNDFDILGTQEVLHNQLEDLQRELPQYGYVGVGRDDGKTAGEYAP------IFYKKDRF 109 Query: 122 RVLQQSYPLLGAKDSFSRAG-----NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 +L+ + + + F G R + KK + +L Sbjct: 110 ELLKSGHFWMAEQTDFPNKGWDAALPRICTWAQFKDRKKKKKIWFFNLHMDHVG------ 163 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 AQ + I + ++ GDFN + I + Sbjct: 164 ----VEARRHSAQLVLKKIEEMCGKDA-VILTGDFNVDQTHESYKLLANSNILFDSYEKA 218 Query: 237 FPKEKDSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQE---------------SFSEIL 279 + + ID+ + + Sbjct: 219 GVRYALNGTFNAFKPNLMTNSRIDHIFVSGKFEVDRYGVLTDTYRVPVENSKELHVGDFP 278 Query: 280 YNEDDIKSRGKRLSDHCPISI 300 ++ + SDH P+ + Sbjct: 279 KEVFSTEAETRLPSDHYPVKV 299 >gi|261868358|ref|YP_003256280.1| exonuclease III [Aggregatibacter actinomycetemcomitans D11S-1] gi|3132266|dbj|BAA28143.1| deoxynuclease [Actinobacillus actinomycetemcomitans] gi|261413690|gb|ACX83061.1| exodeoxyribonuclease III [Aggregatibacter actinomycetemcomitans D11S-1] Length = 267 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 88/309 (28%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L + D++ LQE+ +V Sbjct: 1 MKIMSFNINGL----------------RARPHQLEEIINKYQPDVLGLQEI---KVADEV 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + H +A+ K + + +++ R Sbjct: 42 FPYDL-------VDHLGYHVNHFGQKGHYGVALLSKQAPLSVRKGFPTDDEEAQKR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +E ++ V++ F + + L+ ++ Q + Sbjct: 91 -IIMIDLETKFGQLTVIN-----GYFPQGESREHPTKFPAKQKFYADLQRYLEQDHNAQN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N + L ++++ + F Sbjct: 145 PVIIMGDMNISPSDLDIGIGEENRKRWLRTGKCSFLPEEREWYQRLYAYGLEDTFRHMNP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + + ID+ + ++ + + S Sbjct: 205 TVNDKFSWFDYRSKGFDDNRGLRIDHILANKALVAHCVDTGI-------ALDIRAMNKPS 257 Query: 294 DHCPISIDY 302 DH PI ++ Sbjct: 258 DHAPIWAEF 266 >gi|170721574|ref|YP_001749262.1| exonuclease III [Pseudomonas putida W619] gi|169759577|gb|ACA72893.1| exodeoxyribonuclease III [Pseudomonas putida W619] Length = 270 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 35/313 (11%), Positives = 83/313 (26%), Gaps = 76/313 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V +NIN L + L + D++ LQE + Sbjct: 1 MKIVCFNINGL----------------RARPHQLAALIEKHQPDVIGLQETKVSDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + H +A+ + + +D+ R Sbjct: 41 ------QFPLADVQALGYHVHYHGQKGHYGVALLSRQAPLSLFKGFATDEEDA-----QR 89 Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + NG I +++ F + + L+ + + + Sbjct: 90 RFIWGTFADANGTPITIMN-----GYFPQGESRDHPTKFPAKQRFYSDLQALLEGQFKQD 144 Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241 P ++ GD N ++L ++ + + + F Sbjct: 145 QPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSFLPEEREWMERLKGWGLVDSFRHLH 204 Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + Q+ + D + Sbjct: 205 PEVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQHLVPRIKAAGV-------DYELRAME 257 Query: 291 RLSDHCPISIDYD 303 + SDH PI ++ Sbjct: 258 KPSDHAPIWLELS 270 >gi|332293386|ref|YP_004431995.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus 4H-3-7-5] gi|332171472|gb|AEE20727.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus 4H-3-7-5] Length = 1548 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 96/309 (31%), Gaps = 37/309 (11%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +V+WNI ++ +R + LDAD++ ++E+ A Sbjct: 960 DSFDVVAWNIEWFGDENNAP-PAGRPMSDEIQRDSVRTVLRRLDADVIAVEEIADDILFA 1018 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS------YPLLGAKD 135 ++ + ++ + N + + V +++ +PL D Sbjct: 1019 ELVDGLEGYDYILSDAVSNPTGTPPF--QKLGFIYKTATVNLVKTQALLATIHPLYNGGD 1076 Query: 136 S-------------FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 ++ + V ING + I L + + Sbjct: 1077 DSALVDYPSTTDRFYASGRLPFLMTADVTINGTTEQIDLIALHARA---NGSTQSQNRYD 1133 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------LGNNDDFWKTIDPNDSLIR 236 + + LKD + + S ++ GD+N ++ F + +++ Sbjct: 1134 MRRYDVEVLKDSLD-VQFSDRKIILLGDYNDDVDETVADEVPTTESSFIAYVQDSENYNV 1192 Query: 237 FPK-EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 D+ + + N ID+ + + I+ S S D+ SDH Sbjct: 1193 VTSVLSDAGFRSFVSRENM--IDHIAITDELFDNYIESSASVGYQFYDE--DYAFTASDH 1248 Query: 296 CPISIDYDF 304 P+S + F Sbjct: 1249 FPVSARFIF 1257 >gi|227111460|ref|ZP_03825116.1| exonuclease III [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 268 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 36/310 (11%), Positives = 81/310 (26%), Gaps = 73/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L + D++ LQE ++ + + Sbjct: 1 MKVVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQETKVHDDMFPL 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K + + D+ R Sbjct: 45 EDVSQY----------GYHVYYHGQKGHYGVALLCKTQPIAVRRGFPTDEDDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + V++ F + ++ Q L+ ++ Q + Sbjct: 90 RIIMADFATEHGTLTVVN-----GYFPQGESRDHPVKFPAKTRFYQDLQTYLEQHHSATQ 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P ++ GD N L ++ + + F Sbjct: 145 PLIVMGDVNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMARLQRWGLIDTFRAANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + + D ++ S Sbjct: 205 DSNDRFSWFDYRSAGFDDNRGLRIDLILASTFLAERCVATGI-------DYDIRGMEKPS 257 Query: 294 DHCPISIDYD 303 DH PI + Sbjct: 258 DHAPIWAQFS 267 >gi|206580746|ref|YP_002239049.1| exodeoxyribonuclease III [Klebsiella pneumoniae 342] gi|206569804|gb|ACI11580.1| exodeoxyribonuclease III [Klebsiella pneumoniae 342] Length = 268 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 79/309 (25%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLAAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPDDGEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + + Q L++++ + Sbjct: 90 RIIMAEIPSPFGNVTVIN-----GYFPQGESRDHETKFPAKAAFYQNLQNYLETELNKEN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + + + Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLLGWGLVDTWRQANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + ID + Q + ++ D ++ S Sbjct: 205 DNQEHFSWFDYRSKGFDDNRGLRIDLLLASQPLAQRCVETGI-------DYEIRGMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|296446338|ref|ZP_06888283.1| exodeoxyribonuclease III Xth [Methylosinus trichosporium OB3b] gi|296256111|gb|EFH03193.1| exodeoxyribonuclease III Xth [Methylosinus trichosporium OB3b] Length = 258 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 81/303 (26%), Gaps = 68/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N L Y + + D++ LQE+ +A Sbjct: 1 MRIATWNVN----------------SVRQRLEQLTAYLREVAPDVLCLQEIKCEDAA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ +A+ K + + P R Sbjct: 42 -------FPRLEIEELGYNVETHGQKTFNGVAILSKTPIEVVRGLPKFE-----HDPQAR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E +V + + V I+L + ++ + Y + L Sbjct: 90 Y-IEAVVSTDRGALRVASIYLPNGNPPETEKYAYKLAF------MDCLIAHAASLLALEE 142 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249 P V+AGD+N +D + N + Sbjct: 143 PVVLAGDYNVIPAARDVHDPAAWAGDALFLPQTRAKFQELTNLGYTEALRATTDAAGLYT 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A L + D G + SDH PI Sbjct: 203 FWDYQAGAWQRNKGIRIDHLLLSPQAADRLQSVTI-------DKNLRAGAKPSDHVPIRC 255 Query: 301 DYD 303 + + Sbjct: 256 ELE 258 >gi|220921344|ref|YP_002496645.1| endonuclease/exonuclease/phosphatase [Methylobacterium nodulans ORS 2060] gi|219945950|gb|ACL56342.1| Endonuclease/exonuclease/phosphatase [Methylobacterium nodulans ORS 2060] Length = 279 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 35/280 (12%), Positives = 81/280 (28%), Gaps = 40/280 (14%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL+++N+ +G + + + D+V LQE+ + + Sbjct: 21 LRLITYNVRRCLGIDGRLSPV-----------RIAEVLASCRPDVVALQELDVGRMRSGM 69 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + R H+ + + A+ L ++ L G D R Sbjct: 70 VDQAHAIAQHLGMRAHFHAALRVMEEEY-GNAILTALPSRLVRAEALPGLPDRPH-LEPR 127 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A+ + + +I V+ HL + + L Sbjct: 128 GALWAAITAHDTEIQVIATHLGLRRRERARQAEALLGSRFL------------SDPACRP 175 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 P V+ GD N + + + P+ + + + +D+ + Sbjct: 176 PVVLVGDLNAVPHSFAYRRLAGR-LSDAQRAPGMPRRQ----RTYPSACPLLRLDHVFVS 230 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ++ + SDH P+ +D + Sbjct: 231 EGVTVRRVEV----------VRGPLARIASDHLPLLVDLE 260 >gi|325205470|gb|ADZ00923.1| exodeoxyribonuclease III [Neisseria meningitidis M04-240196] Length = 256 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 88/305 (28%), Gaps = 73/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + DI+ LQE Sbjct: 1 MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ ++V S R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRSVPEDVHF-----GLPSLPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V++++ + +DS + Y Q L +++ + Sbjct: 90 RVIAATV----GGVRVINVYCVNGEAIDSPKFKYKE------QWFAALTEFVRDEMARHG 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D ++K + + Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWFKNLLDLGLTDSLRQVHPEGAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ L D +R SDH P++ Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDV-------RVDLETRALERPSDHAPVT 251 Query: 300 IDYDF 304 ++D+ Sbjct: 252 AEFDW 256 >gi|237745581|ref|ZP_04576061.1| exodeoxyribonuclease III [Oxalobacter formigenes HOxBLS] gi|229376932|gb|EEO27023.1| exodeoxyribonuclease III [Oxalobacter formigenes HOxBLS] Length = 255 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 87/304 (28%), Gaps = 74/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + Q+ + D++ LQE + Sbjct: 1 MKIATWNVNSL----------------KVRLPQVLQWLNDNPVDVLCLQETKLTDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + Q + +L F R Sbjct: 41 ------KFPVMEIAAAGYQTVFTGQKTYNGVAILSR-----QSAGDILKNNPFFPDEQQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V K+ V+ ++ + +DS + Y + L W+ ++K+ Sbjct: 90 I-----VTGTFGKLRVVCAYVPNGQAVDSDKYRYKIE------WLKALHAWLLEEKKKYP 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + GD+N ++ + + F + Sbjct: 139 YLALLGDYNIAPEDRDVYDPAAWEGNVLVSEPERAAFRALLDIGFVDAF-RLFSQPEKTY 197 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +D+ ++ +N + D + + K+ SDH P+ Sbjct: 198 SWWDYRQLAFPRNRGLRLDHILLSENLAPHCTACTI-------DRMPRKWKQPSDHTPVI 250 Query: 300 IDYD 303 + + Sbjct: 251 AELE 254 >gi|23098760|ref|NP_692226.1| hypothetical protein OB1305 [Oceanobacillus iheyensis HTE831] gi|22776987|dbj|BAC13261.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 373 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 34/292 (11%), Positives = 84/292 (28%), Gaps = 58/292 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--- 79 +++ ++N+ + +G + L +LD DI+ LQE+ + Sbjct: 35 DLKVGTFNVAAGTGLDG-----------EYNIDRLADTISDLDVDIIGLQEVDVHWGYRS 83 Query: 80 -----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + ++ + +++ + N + + V K V ++ + Sbjct: 84 NFDHMMEELASRLDMEYYFAPIYDLAPVNEGDPNRQY-GVGVLSKYPIVDAENRKITRLS 142 Query: 135 DSFSRAGN---RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 ++ + + G ++ HL Y ++ Q + Sbjct: 143 TQVPNPFPTREPGFLQAKINVEGAEVMFYVTHL-----------DYRGDPTIREMQVADM 191 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 ++ + ++ GD N + N F +D D+ N Sbjct: 192 QEIM----SEGNYNILVGDMNARPNATEIGPLFRDFVD-------VWGVHDTDGNTFPAH 240 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY + + + SDH P++ + + Sbjct: 241 NPDRRIDYILASKRMEVKTAEVKNEVES-------------SDHLPVTAEIE 279 >gi|86159101|ref|YP_465886.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans 2CP-C] gi|85775612|gb|ABC82449.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans 2CP-C] Length = 282 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 80/285 (28%), Gaps = 55/285 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 R+V+WN++ L D + + ++ AD+ LQE+G+ Sbjct: 24 FRVVTWNVHGLRGAGRRP-----------DPERIARVLDDIGADVAGLQEVGAS------ 66 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIH-----TAIAVRKKNVRVLQQSYPLLGAKDSFS 138 P + RL + H A+ ++ ++Y L Sbjct: 67 LPGADAHAAEALARLTGLNGAFGPTLQHARGFAYGNAILSRHPIDATRTYDLSVPGR--- 123 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R + V + ++ V HL Q A L I + Sbjct: 124 --EPRGCLRADVVLGPMRVHVFAAHLGLHWR------------ERRRQAAALLSADILRD 169 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 P V+ GDFN + +T+ P + +D Sbjct: 170 AALSHPLVLVGDFNSPSDRSAVPRWLRRTLTDCAVAAGRPAATFPSAWP------LLRLD 223 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D ++ +R SDH P+ ++ + Sbjct: 224 RAYVDAAL--RVVACEVVRTPR--------ARRASDHLPLVVELE 258 >gi|30248054|ref|NP_840124.1| exodeoxyribonuclease III:exodeoxyribonuclease III xth [Nitrosomonas europaea ATCC 19718] gi|30179939|emb|CAD83934.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth [Nitrosomonas europaea ATCC 19718] Length = 254 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 32/303 (10%), Positives = 82/303 (27%), Gaps = 74/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + + DI+ LQE + Sbjct: 1 MKIATWNVNSL----------------KVRLQQVIDWLNLNQPDILCLQETKLQDEF--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ K ++ + + Sbjct: 42 -------FPMDAIAQAGYRSIYIGQKTYNGVALLSK------ETGEDICTALPGFDDMQK 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + V+ ++ + +DS + Y + L ++ Q++ Sbjct: 89 RLIAATY----GDLRVICAYVPNGEHVDSEKYIYK------LEWLSQLNRFLQQQRACYG 138 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 + GDFN D ++ + + F + Sbjct: 139 KVALLGDFNIAPEDRDVYDPEAWRGQVLCSEPERQAFRGLLDTGFVDSF-HLFEQPEKTY 197 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ++ ID+ ++ ++ D + + +R SDH P+ Sbjct: 198 TWWDYRMMAFRRNRGLRIDHILLSHEMADRCT-------IWQVDKLPRKLERPSDHAPVL 250 Query: 300 IDY 302 ++ Sbjct: 251 VEL 253 >gi|189346698|ref|YP_001943227.1| Endonuclease/exonuclease/phosphatase [Chlorobium limicola DSM 245] gi|189340845|gb|ACD90248.1| Endonuclease/exonuclease/phosphatase [Chlorobium limicola DSM 245] Length = 347 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 41/354 (11%), Positives = 90/354 (25%), Gaps = 65/354 (18%) Query: 1 MIRKYVLALVFFLVPCT--------ASVAQKVRLVSWNINTLSE-------QEGVSLWKN 45 M + L+ + V + L+ WN+ L + + + Sbjct: 1 MKKSITCILLIYTVLVLHSIKIHAGEQKNDSLLLMWWNVENLFDTHNDPDIDDEEFTPEG 60 Query: 46 SVKRTTSDYT----LLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFY 93 T ++Q +++ DI+ E + A + + Sbjct: 61 RNHWTQKKLALKRLRIKQVLDSINTSPEYRRYPDILAFAETENRTVFAGILKE-----IG 115 Query: 94 STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153 S+ + + I +A + VR++ + ++ + R + Sbjct: 116 SSPYKTLYIESPDKRGIDIGLAYNPQTVRLISSKFYIVPVG---NDKPTRHIIIAGFSAG 172 Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSP-SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 G ++ H S F + A L+ ++ + +I GDFN Sbjct: 173 GHPFRLMLNHWPSRAFDKEWTEQKRITAAKTARHIADSLRR-----TDATIDLIIMGDFN 227 Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-------NKNLRNKIPIDYFVMDQN 265 + + + R + C + N ID ++ Sbjct: 228 DEPENRSIKQVLGSS-GDAARVRRACSDLLYNCWSGYSGIGSYSYRNNWERIDQILLSCG 286 Query: 266 AYKFLIQESFS----------------EILYNEDDIKSRGKRLSDHCPISIDYD 303 + Y+ SDH P+ + D Sbjct: 287 MLQKKGLSISHNAFRCFYFPNMLAQSANRPYSTYHKGKYKGGYSDHLPLLLKVD 340 >gi|83942567|ref|ZP_00955028.1| exodeoxyribonuclease III [Sulfitobacter sp. EE-36] gi|83846660|gb|EAP84536.1| exodeoxyribonuclease III [Sulfitobacter sp. EE-36] Length = 265 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 83/309 (26%), Gaps = 71/309 (22%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SY 77 +++ ++NIN + L Q+ D+ LQE+ Sbjct: 2 QGAVMKIATFNING----------------IKARIDALPQWLDEAQPDVAILQEIKSVDE 45 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 ++F + + +A+ K D Sbjct: 46 GFPRELFEDRGYNV------------ETHGQKSFNGVAILSKLPLEDVTRGLPGDESDEQ 93 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 +R +E V + + + ++L + + Y + Q L+D Sbjct: 94 ARY-----IEATVVGDHSSVRLCGLYLPNGNPAPGPKYDYKLA------WMQRLEDRARA 142 Query: 198 KKESLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKD 242 PF++ GDFN + + W+ + F Sbjct: 143 LLAEETPFLLTGDFNIIPQAEDAATPDAWREDALFRPESRAAWRRLLALGLTEAFRARTQ 202 Query: 243 SRCNANKNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + + N I ID+F++ L D ++ SD Sbjct: 203 GPGHYSFWDYQAGAWNRNNGIRIDHFLLSPAIADSLRDCQI-------DKDVRGREKPSD 255 Query: 295 HCPISIDYD 303 H P+ ++ D Sbjct: 256 HVPVWVELD 264 >gi|300309579|ref|YP_003773671.1| metal-dependent hydrolase [Herbaspirillum seropedicae SmR1] gi|300072364|gb|ADJ61763.1| metal-dependent hydrolase protein [Herbaspirillum seropedicae SmR1] Length = 265 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 45/302 (14%), Positives = 85/302 (28%), Gaps = 63/302 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+R+ ++NI+ + L+Q LD DI+FLQE+ + + Sbjct: 2 KLRVATYNIH----------KGVTSFAGRPRILALKQALAQLDPDILFLQEVQGRHDLNA 51 Query: 83 VFPKNTW------CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + W + + H A+ + ++ + S Sbjct: 52 LRHASNWPQQGQHEYLAGDTHHAAYGMNAVYDHGHHGNALISRFEIASIRNQDV-----S 106 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 +R + +V + G ++ IHL F +Q L ++ Sbjct: 107 DHAYESRGILHCVVPVEGVEVHCYVIHLGLFAGG-------------RRRQIDALIQAVS 153 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS------------- 243 P +IAGDFN N L ++ + + + Sbjct: 154 TSSPPDAPLLIAGDFNDWTNQLS--RTLYQNLGVTEVFDQPQPNARGVMQGLRRLGGLSA 211 Query: 244 ---RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + +D + F RLSDH PI Sbjct: 212 PIRPARTFPAMMPWLRLDRIYVRG----------FRVETAEVLKDGP-WARLSDHAPIVT 260 Query: 301 DY 302 + Sbjct: 261 EL 262 >gi|157370955|ref|YP_001478944.1| exonuclease III [Serratia proteamaculans 568] gi|157322719|gb|ABV41816.1| exodeoxyribonuclease III [Serratia proteamaculans 568] Length = 268 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 36/310 (11%), Positives = 80/310 (25%), Gaps = 73/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + H +A+ K + + +D+ R Sbjct: 42 FP-------LEEVSQHGYHVFYHGQKGHYGVALLTKEKPLAVRRGFPTDDEDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + ++ Q L++++ Q+ Sbjct: 90 RIIMADLATPQGTLTVIN-----GYFPQGESRDHPTKFPAKTRFYQDLQNYLEQQMSVDS 144 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 P ++ GD N + ++ + + + Sbjct: 145 PVLVMGDVNISPSDYDIGIGEESRKRWLRTGKCSFLPEEREWMDRLMNWGLVDTYRHANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 R + + ID + D ++ S Sbjct: 205 ERNDQFSWFDYRSRGFDENRGLRIDLLLASTPLAARCTATGI-------DYQIRGMEKPS 257 Query: 294 DHCPISIDYD 303 DH P+ ++ Sbjct: 258 DHAPVWAEFS 267 >gi|126331541|ref|XP_001377893.1| PREDICTED: similar to CCR4 carbon catabolite repression 4-like [Monodelphis domestica] Length = 376 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 90/301 (29%), Gaps = 26/301 (8%) Query: 17 TASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + S +R++ WNI L E ++ + L+ + DI+ LQE Sbjct: 81 STSSHPPIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQE 140 Query: 74 MGSY-NAVAKVFPKNTWCIFYSTERLINH--SKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 + Y + + + + + + + ++ D ++ + V + L Sbjct: 141 VDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQSRFALVNSTNIRL 200 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 ++ A L G+ + HLK+ + S Q Sbjct: 201 TAMTLKTNQVA--IAQTLECRKTGRLFCIAVTHLKA----------RTGWERFRSAQGSD 248 Query: 191 LKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L + + + +P ++ GDFN + +++ + + + S Sbjct: 249 LLQNLQSITQGAEIPLIVCGDFNAEPTEEVYRHFASSSLNLSSAYKLLSADGQSEP-PYT 307 Query: 250 NLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +DY + A + SDH + D+ Sbjct: 308 TWKIRSSGECRHTLDYIWYSRQALHVRSALGLLTEEQIGPNRLPSFNYPSDHLSLVCDFS 367 Query: 304 F 304 F Sbjct: 368 F 368 >gi|163753635|ref|ZP_02160758.1| Endonuclease/exonuclease/phosphatase [Kordia algicida OT-1] gi|161325849|gb|EDP97175.1| Endonuclease/exonuclease/phosphatase [Kordia algicida OT-1] Length = 269 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 97/302 (32%), Gaps = 42/302 (13%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 L ++ T + +++ ++SWNI + + + + K Sbjct: 3 YLIILLLFATTTIAQNKEITIISWNIQHFG-----------KTKNAEEIEKIAEIVK--H 49 Query: 66 ADIVFLQEM----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 ADI+ +QE+ AV ++ + + S AI + K++ Sbjct: 50 ADIIAIQEVVTTFQGVQAVNRLTEALEKKGESWDYLISEKTNSPSRMTECYAIVWKNKHI 109 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 ++ + + +R + + +V++ H K Sbjct: 110 KI--KKGHEGSLVKELDKMVDREPFLVQFYVADTSFFVMNYHAKPHKRNP---------- 157 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + + L ++ + ++ F++AGDFN + + P + + + Sbjct: 158 ---RPEVKELLAYVQKNYKNKK-FILAGDFNLSQSEEVFKNFKLAGFKPVNIDQKTTLKL 213 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-DIKSRGKRLSDHCPISI 300 C L ID + S I + + D + +RLSDH P+ + Sbjct: 214 I--CKNASYLNYP--IDNIFYTP----KINATSTKIIDFVKHCDNLTASRRLSDHLPVEL 265 Query: 301 DY 302 + Sbjct: 266 KF 267 >gi|90415898|ref|ZP_01223831.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2207] gi|90332272|gb|EAS47469.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2207] Length = 271 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 75/311 (24%), Gaps = 78/311 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 R+VS+N+N L S L DI+ LQE + Sbjct: 4 RIVSFNVNGL----------------RSRLHQLEAMINQHSPDIIGLQETKVSDE----- 42 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + + + H +A+ K + +D+ RR Sbjct: 43 -----EFPHQAIADLGYEVNFHGQKGHYGVALLSKAPAINITRGYPSDGEDA-----QRR 92 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + ING+ + V++ F + + L ++ + Sbjct: 93 MIHGQYSINGQTVHVIN-----GYFPQGESRAHPTKFPAKEKFYADLLAYLDSNFNADDL 147 Query: 205 FVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 + GD N N +D + Sbjct: 148 VSVMGDMNVAANDIDVGIKPENAKRWIKTGKCAFLPEERQWLQNLLDWGLQDSFREQNAA 207 Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + + K + + D ++ Sbjct: 208 DD--SYSWFDYRSKGFELEPKRGLRIDLILASPSLMKLVTETGI-------DTAARGFEK 258 Query: 292 LSDHCPISIDY 302 SDHCPI D Sbjct: 259 PSDHCPIWADL 269 >gi|325283955|ref|YP_004256496.1| Endonuclease/exonuclease/phosphatase [Deinococcus proteolyticus MRP] gi|324315764|gb|ADY26879.1| Endonuclease/exonuclease/phosphatase [Deinococcus proteolyticus MRP] Length = 1050 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 44/317 (13%), Positives = 92/317 (29%), Gaps = 46/317 (14%) Query: 21 AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN- 78 +++ N+ N + +S + + LDAD+V L E+ + Sbjct: 477 GGTLKVAGANVLNYFTTFGPNDRGADSAYEFGRQQAKVVAALRGLDADVVTLMEVQNNGD 536 Query: 79 -AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A+ + + S + + I A+ + + PL + Sbjct: 537 VALNDLVASLN-AAYGSETYRAVQTGTIGTDAIKVAVIYKP------ARVTPLGTYQTDT 589 Query: 138 SRAGNRRAVELLVEIN--GKKIWVLDIHLKS-FCFLDSLENTYSPSC--SLLSQQAQWLK 192 +R + N G V+ H KS S + C L QQA+ L Sbjct: 590 DPVHSRPPLAQTFRDNAGGGVFTVVANHFKSKGSCPSSGDMDTGEGCWNELRVQQARALL 649 Query: 193 DWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 ++ + + ++ GDFN +TI + + + + Sbjct: 650 GFVERLKAQSGDSDVLLMGDFNAYGAEKPI-----QTIVDGGFVSENLRIPAEERYSYQF 704 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG--------------------- 289 +D+ + ++ + + I +E + Sbjct: 705 GGQFGYLDHALASRSLDAQVSGVTEWHINADEPTLADYNVEYKANPECRTNVCTSPDLWQ 764 Query: 290 ---KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 765 NNPFRASDHDPVLVGLN 781 >gi|190575134|ref|YP_001972979.1| putative endonuclease/exonuclease/phosphatase family secreted protein [Stenotrophomonas maltophilia K279a] gi|190013056|emb|CAQ46688.1| putative endonuclease/exonuclease/phosphatase family secreted protein [Stenotrophomonas maltophilia K279a] Length = 294 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 86/281 (30%), Gaps = 36/281 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +V++N++ E + K L D V LQE+ V Sbjct: 46 MSMVTFNLHHDRED------------WPRRRRTILAELKRLQPDAVALQEVIQRRNVR-- 91 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + W + + S A+ + + Q + L D R Sbjct: 92 -NQAQWLASQLGYKYVFVSTDAVGAPKRYGNALLTRRPILAQGDHLLQPLDDY------R 144 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 L ++++G + V HL E + + Q + L +I+ + Sbjct: 145 TVAHLRIDVDGTPVNVYATHLN--------ERSDESGQRIRRSQVEDLLRFISAT-SAGA 195 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 P VIAGDFN ++ ++ D S+ + ID+ Sbjct: 196 PVVIAGDFNALVDAGDLSELRSHYGDSYGSVHVNTDLSGVSTLNRHYYQAPSRIDHIFFQ 255 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 Q+ ++ + DD G+ SDH + F Sbjct: 256 QD---EMVAREAKILFDQPDDS---GRWASDHYGVWTRLQF 290 >gi|262369779|ref|ZP_06063107.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262315847|gb|EEY96886.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 440 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 93/298 (31%), Gaps = 34/298 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 AS A + +++++NI L + S L Q K DA + QE Sbjct: 166 PVASSADEFKVLTYNIYALPL---------VASKIDSRLEQLPQNLKGYDA--ILFQETF 214 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + A + + + + + N + I V + V + Sbjct: 215 ASGRTAMLAKLAQEYPYQTYIPIGS-----GFNIYDSGILVASHHPIVKTDHFIYPSCPG 269 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 A + + + NGK V H SF + + +Q + L D Sbjct: 270 IDCFAD-KGVIYAEILKNGKAYHVTSTHTASFDTDAARDMRQQQ-----FKQIRALVD-- 321 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---- 251 Q S ++ GDFN L D I+ N ++ +S + N Sbjct: 322 KQNIPSFDAVLMGGDFNVN-KLLWPQDYAQMQINLNGTVPVSTGYTESTFDPRVNKLAGA 380 Query: 252 -----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +DY V N + + + IL + D LSDH P+ + + Sbjct: 381 GLTGGSTVEYLDYVVSSNNHRQPMQARNDVRILRSAADPLFMTWDLSDHFPVMGQFQY 438 >gi|108757277|ref|YP_635313.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] gi|108461157|gb|ABF86342.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] Length = 996 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 42/296 (14%), Positives = 85/296 (28%), Gaps = 29/296 (9%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---G 75 + + + + WN+ R ++ ++ L EM Sbjct: 547 TASAPLTVGHWNLEWFGAPTQGPPDD-------LQMAHARDIIRDSGVNVWGLVEMVDAA 599 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + P + T + N + SN + I Q A D Sbjct: 600 DFATLKEQLPGFNGFLANDTSFVPNGTAYYSNGEQKPGILYDSTLTLQEAQLILTANAAD 659 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R R V+ + V+ +HLK+F + + + LK ++ Sbjct: 660 FGGRPPLRVDFTTTVDGVSTPLVVIVVHLKAF--------DNQTAYEQRQRSSAALKSYL 711 Query: 196 TQKKESLVPFVIAGDFNRKINYL--------GNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 S ++ GD+N ++ F + + S Sbjct: 712 DTSLPS-ERVLVIGDWNDDVDQSITQGSDGAPLPSPFAPFVADTQRYTFITE-PLSLRGL 769 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ID+ ++ + S + + I + G +SDH P+ YD Sbjct: 770 RTTVDYPDAIDHTLVSNELAANYLPGSVEIL-RPDAWIPNYGDIVSDHYPVISSYD 824 >gi|149279437|ref|ZP_01885567.1| hypothetical protein PBAL39_16596 [Pedobacter sp. BAL39] gi|149229730|gb|EDM35119.1| hypothetical protein PBAL39_16596 [Pedobacter sp. BAL39] Length = 294 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 87/309 (28%), Gaps = 41/309 (13%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M K + A++ ++ AS AQ+ + ++NI + + + R + Sbjct: 14 MKIKSLFAVLILVLAGAASYAQQYTVGTFNIRNDNSGDVGN-------RWEQRGPVSANL 66 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + D+ +QE + + + S K Sbjct: 67 LRFHQYDVFGVQEAFKNQVDDLQRLLPEYDHYGAGRDDGKDGGEHSTVFYRKDKFKLIKK 126 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYS 178 P + NR + ++ GK+ + + H F + Sbjct: 127 GDFWLSENPDRPGLGWDATCCNRICSYVCLQDLKTGKQFYFFNAH-----FDHEGKIARV 181 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 S L+ + + + +P + GD N + + + + + Sbjct: 182 ESSKLIISKIRSIA--------GKLPAIFTGDLNGGHSS----EWYLTLANSGFLKDTYG 229 Query: 239 KEKDSRCNANKNLRN------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + K N K ID+ + ++ + GK + Sbjct: 230 QVKFPYANNASFNAFGKALEGKEIIDHVFVTKDFTAK---------RWGLLTDTYHGKFI 280 Query: 293 SDHCPISID 301 SDH P+ +D Sbjct: 281 SDHFPVLVD 289 >gi|108762628|ref|YP_630932.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] gi|108466508|gb|ABF91693.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] Length = 254 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 88/282 (31%), Gaps = 47/282 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++RLVS+NI++ +G D + + +DADIV LQE+G + AV Sbjct: 2 ELRLVSYNIHSGIGTDGRF-----------DLGRVGAVLREVDADIVALQEVGDFRAVTP 50 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + N A+ + V ++Y L S R Sbjct: 51 REDQPEHLADMLGLHMAFGPNV-VRNGRRYGNAILSRLPIVKSRNYDL-----SVGRREP 104 Query: 143 RRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R A+ ++I G ++ V +HL Q+A L I + Sbjct: 105 RGALRCDLDIGGGLQLHVFSLHL------------GLRLGERRRQEALLLSSDILRDAAR 152 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 P V+ GDFN N + E + + +D Sbjct: 153 KDPLVVCGDFNYWGNGPVPSLVRQAI-------HDAALELGAPARTYPTRLPLLRLDRIF 205 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D I + SDH P+ + ++ Sbjct: 206 VDAGVRPLSI----------HPHRTELSRVASDHLPLVLRFE 237 >gi|45658468|ref|YP_002554.1| hemolysin [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45601711|gb|AAS71191.1| hemolysin [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 623 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 42/293 (14%), Positives = 95/293 (32%), Gaps = 25/293 (8%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++++S N+ L + W N + Y K + D++ +E +A Sbjct: 154 EIKVLSHNVFMLPTN--LPRWGNLGHDERAKRISKSDYVK--NQDVIVFEEAFDTSARKI 209 Query: 83 VFPKNTWCIFYST--------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + Y T + S + ++ + + K + Y + Sbjct: 210 LLDNLREEYPYQTDVVGRTKKNWDASLGNFRSYSLVNGGVVILSKWPIEEKIQYIFNDSG 269 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 N+ V + + GKK V+ H +S +N + + Q ++++ Sbjct: 270 CGTDWFANKGFVYVKINKEGKKFHVIGTHAQS-----QDQNCSNLGIPNRANQFDDIRNF 324 Query: 195 I-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN----ANK 249 I ++ +I GD N D + + P D++ N Sbjct: 325 IYSKNIPKDETVLIVGDLNVIKESNEYYDMISRLNVNEPRYVGVPFTWDAKTNEIAAYYY 384 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---LSDHCPIS 299 + +DY + ++ + + ++ + ++ G SDH PI Sbjct: 385 ENEEPVYLDYIFVSKSHAQPPVWQNLAYDPVSKQTWTVSGYTSDEFSDHYPIY 437 >gi|301761530|ref|XP_002916188.1| PREDICTED: nocturnin-like [Ailuropoda melanoleuca] Length = 452 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 38/297 (12%), Positives = 84/297 (28%), Gaps = 20/297 (6%) Query: 18 ASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 S +R++ WNI L E ++ + L+ + DI+ LQE+ Sbjct: 157 PSSHPPIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYHPDILCLQEV 216 Query: 75 GSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 Y + + + + + + +N A+ + +++ + L Sbjct: 217 DHYFDTFQPLLGRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLT 276 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 A + A+ +E + C L+ Sbjct: 277 AMTLKTNQ---VAIAQTLECKESSRQFCIAVTHLKARPGWERFRSAQGC-------DLLQ 326 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + + VP ++ GDFN + +++ + + + S Sbjct: 327 NLQNITHGAKVPLIVCGDFNAEPTEEVYKHFASSSLNLSSAYKLLSADGQSEPPYTTWKI 386 Query: 253 N-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +DY Q+A + + SDH + D+ F Sbjct: 387 RTSGECRHTLDYIWYSQHALRVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 443 >gi|193222381|emb|CAL62516.2| Putative exodeoxyribonuclease III [Herminiimonas arsenicoxydans] Length = 254 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 31/303 (10%), Positives = 85/303 (28%), Gaps = 72/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N+L ++Q+ + D++ LQE + + Sbjct: 1 MKLATWNVNSL----------------KVRLPQVQQWLVDNPVDVLCLQETKTVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ ++ + + Sbjct: 41 ------KFPVAEIEAAGYQVAFTGQKTYNGVAILSRHPITDVTKN------NPLLDDEQQ 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + I ++ ++ + DS + Y + L +W+ Q+++ Sbjct: 89 RIIAGTI----QGIRIVCAYVPNGQSPDSDKYIYK------LNWLKALHEWLAQEQQQHP 138 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANK 249 + GD+N +D + + + + Sbjct: 139 ELALLGDYNIAPEDRDVHDPAAWAGQVLVSEPERAAFVRLQEMGFTDAFRMFEQPEKLYS 198 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ D + + ++ SDH P+ Sbjct: 199 WWDYRQMGFRLNRGLRIDHILLSAPLAARCSACVI-------DKVPRKWEQPSDHTPVIA 251 Query: 301 DYD 303 D Sbjct: 252 TID 254 >gi|156839947|ref|XP_001643659.1| hypothetical protein Kpol_1040p14 [Vanderwaltozyma polyspora DSM 70294] gi|156114279|gb|EDO15801.1| hypothetical protein Kpol_1040p14 [Vanderwaltozyma polyspora DSM 70294] Length = 784 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 93/327 (28%), Gaps = 42/327 (12%) Query: 20 VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + ++S+N + + + L+ + +D++ LQE+ S Sbjct: 448 QKKSFTVLSYNTLCQHYATPKMYRYTPSWALSWDYRREKLKDQILSFKSDVICLQEVESK 507 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSK----RDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + P + T +K +DS I ++ VL + Sbjct: 508 SYEEFWLPLLQKNGYAGTFYAKTRAKTMQTKDSKKVDGCCIFYKESEFNVLYKDSVDFSG 567 Query: 134 KDSFSRAGNR-------------RAVELLVE--INGKKIWVLDIHLKSFC-FLDSLENTY 177 + R A+ + +E +G+ +WV+ HL F D Sbjct: 568 VWMKHKKFQRTEDYLNRAMNKDNVALYMKLEHIKSGESVWVVTTHLHWDPQFNDVKTFQV 627 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL--------------GNNDD 223 L + + + ++++ P +I GD N ++ + Sbjct: 628 GILLDHLEELLKDNNNASSKQEIRKCPVIICGDLNSHLDSAVYELLSTGHVQVHKDIENR 687 Query: 224 FWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277 F+ + + C N IDY + + Sbjct: 688 FYGYMSQKNFAHNLALRSSYDCIGELPFTNFTPSFTDVIDYIWYSTHALRVRGVLGPVDK 747 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ K SDH P+ Y+F Sbjct: 748 DYVSKFIGFPNDKFPSDHIPLLARYEF 774 >gi|86749875|ref|YP_486371.1| exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2] gi|86572903|gb|ABD07460.1| Exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2] Length = 276 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 87/312 (27%), Gaps = 71/312 (22%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG- 75 +R+ +WN+N L + D+V LQE+ Sbjct: 7 FEPTDNDMRIATWNVN----------------SVRQRLDHLVSWLNECAPDVVCLQEIKC 50 Query: 76 -SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + +A+ K Sbjct: 51 VDEAFPREAIEALGYNVVTH------------GQKTFNGVALLSKYPLEEATPRLAGDDD 98 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D+ +R +E +V + + V ++L + ++S + Y + L ++ Sbjct: 99 DTHARF-----LEGVVSLKRGVVRVACLYLPNGNPVESEKYPYK------LRWMSRLLEY 147 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPK 239 Q+ ++ P ++AGDFN + ++ ++ + Sbjct: 148 TQQRLKTEEPLILAGDFNVIPQPIDVHNPAGWVDDALFRPQTRESFQALLGLGLTDALRA 207 Query: 240 EKDSRCNANKNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 D+ + ID+ ++ A L D ++ Sbjct: 208 STDAPGQYTFWDYQAGAWQKNWGLRIDHLLLSPQATDRLRNVGI-------DAYVRNWEK 260 Query: 292 LSDHCPISIDYD 303 SDH P+ D+D Sbjct: 261 PSDHVPVWADFD 272 >gi|229591315|ref|YP_002873434.1| exonuclease III [Pseudomonas fluorescens SBW25] gi|229363181|emb|CAY50233.1| exodeoxyribonuclease III [Pseudomonas fluorescens SBW25] Length = 270 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 33/313 (10%), Positives = 83/313 (26%), Gaps = 76/313 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L + D++ LQE ++ Sbjct: 1 MKIVSFNINGL----------------RARPHQLAALIEKHQPDVIGLQETKVHDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + H +A+ + + +D+ R Sbjct: 41 ------QFPLAEVQALGYHVYYHGQKGHYGVALLSRQPALSLHKGFASDEEDA-----QR 89 Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + +G+ + +++ F + + + L+ + + + Sbjct: 90 RFIWGTFADEHGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYEDLQQLLESQFSND 144 Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241 V+ GD N ++L ++ + + F Sbjct: 145 QALVVMGDVNISPEDCDIGIGADNAKRWLKTGKCSFLPEEREWMARLKNWGLVDSFRHLN 204 Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + + D + Sbjct: 205 PDVVDRFSWFDYRSRGFEDEPKRGLRIDVIMASNGLLPRVKDAGV-------DYDLRGLE 257 Query: 291 RLSDHCPISIDYD 303 + SDH PI ++ Sbjct: 258 KPSDHAPIWLELS 270 >gi|264676938|ref|YP_003276844.1| endonuclease/exonuclease/phosphatase [Comamonas testosteroni CNB-2] gi|299531500|ref|ZP_07044906.1| endonuclease/exonuclease/phosphatase [Comamonas testosteroni S44] gi|262207450|gb|ACY31548.1| endonuclease/exonuclease/phosphatase [Comamonas testosteroni CNB-2] gi|298720463|gb|EFI61414.1| endonuclease/exonuclease/phosphatase [Comamonas testosteroni S44] Length = 254 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 50/293 (17%), Positives = 90/293 (30%), Gaps = 53/293 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 T Q +R+ ++NI+ + + L + LDADIV LQE+ Sbjct: 7 FTPPEPQILRVATYNIH--------KGVQGLGPARRLEIHNLGLAVEQLDADIVCLQEVR 58 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSN------NDIHTAIAVRKKNVRVLQQSYP 129 N + + + W E L D A+ + + Q Sbjct: 59 KMNRKEEQY-FDRWPNVPQAEYLAPEGYESVYLTNAYTRDGEHGNALLSRWPVIGYQH-- 115 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 S R R + + ++I+GK++ + +HL +Q Sbjct: 116 ---EDISDHRFEQRGLLHVELDIHGKRVHSIVVHLGLIPGS-------------RIRQIA 159 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L+ +I ++ P V+AGDFN D + F E+ Sbjct: 160 LLQRFIEREVPPNAPLVVAGDFN---------DWGNQIKRMLAGFGLFEYEETQGILTYP 210 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D+ + L R+SDH P+ ++ Sbjct: 211 SRLPIAQLDHIYVRG-----LTPLGLQVPKGRI------WWRMSDHLPLIAEF 252 >gi|171319848|ref|ZP_02908930.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5] gi|171094910|gb|EDT39940.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5] Length = 606 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 46/327 (14%), Positives = 91/327 (27%), Gaps = 51/327 (15%) Query: 16 CTASVAQK---VRLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNL 64 +A +R+ S+N+ G+ + + K L Sbjct: 284 ASAPARDPKSNLRVASFNVLNYFNGNGMGGGFDDPNNRGAKTYPEFQRQEAKIVSALKAL 343 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRV 123 DAD++ L E+ + + S R+++ R + I A+ + V Sbjct: 344 DADVIGLMEIQNNGYGELSAVRQLAAKLGSNWRVVDPGTSRLGGDAITVAMIYDSRAVE- 402 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVE---INGKKIWVLDIHLKSFCFLDSLENTYSP- 179 P+ A NR+ + N + + + HLKS D+ + Sbjct: 403 -----PVGRASTLAIDDKNRQPLAQSFRRVGGNKQALTIAVNHLKSKNCPDAANDDLDQG 457 Query: 180 -----SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 ++ A L DW+ + ++ GDFN + ++ Sbjct: 458 DGQGCWNPTRTRAAAKLADWLAGTPTGVAGQGTLLIGDFNSYTYEDPI-----RLLESRG 512 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED--------- 283 + + + +D+ + + I +E Sbjct: 513 YRNLVSRWIGANAYSYVYNGEAGYLDHALASLPLASHVKAVHEWHINADEPLALQYTLAY 572 Query: 284 --------DIKSRGKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 573 KSTEQQKTYYAPDAYRSSDHDPVLIDI 599 >gi|160900882|ref|YP_001566464.1| endonuclease/exonuclease/phosphatase [Delftia acidovorans SPH-1] gi|160366466|gb|ABX38079.1| Endonuclease/exonuclease/phosphatase [Delftia acidovorans SPH-1] Length = 257 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 83/285 (29%), Gaps = 53/285 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NI+ + + L + LDADIV LQE+ N + Sbjct: 18 LRVATYNIH--------KGVQGMGPVRRLEIHNLGHAVEQLDADIVCLQEVRKMN-HKEA 68 Query: 84 FPKNTWCIFYSTERLINHSKRDSN------NDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 W E L A+ + V Q S Sbjct: 69 AYFERWPQVSQAEYLAPLGYEAVYRTNAYTRHGEHGNALLTRWPVVGHQH-----EDISD 123 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R R + + VE+ +++ + +HL +Q LK +I + Sbjct: 124 HRFEQRGLLHVEVEVQNRRVHTIVVHLGLIPGS-------------RVRQVSQLKRFIER 170 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 + P V+AGDFN D + + ++ + + Sbjct: 171 EVPPGAPVVVAGDFN---------DWGGQIKRMLGGFGLYEYDELPSVPTYPSRLPLAQL 221 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D+ + L R+SDH P+ ++ Sbjct: 222 DHVYVRG-----LTPLGLHVPKGRI------WWRMSDHLPLIAEF 255 >gi|71909260|ref|YP_286847.1| exodeoxyribonuclease III [Dechloromonas aromatica RCB] gi|71848881|gb|AAZ48377.1| Exodeoxyribonuclease III [Dechloromonas aromatica RCB] Length = 254 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 32/303 (10%), Positives = 75/303 (24%), Gaps = 72/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N+L L + D + LQE Sbjct: 1 MKIASWNVNSL----------------KVRLPHLLDWLAAAQPDALCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + S + +A+ + + ++ F R Sbjct: 35 LKLEDHNFPRAEIEAAGYQVAFSGQKTYNGVALLARQPI-----HDVICGNPHFPDEQKR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + V+ ++ + + S + Y + L W+ ++ Sbjct: 90 LISGTV-----GDTRVVCAYMPNGQAVGSDKYDYK------LRWLDALAVWLGEEMSKYP 138 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249 + GD+N + +D + L + + Sbjct: 139 KLALCGDYNIAPDDRDVHDPKAWAGNILCSEPERAAFQRFIGLGLNDSFRLFEQPEKTFS 198 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ D + +R SDH P+ Sbjct: 199 WWDYRMLGFQKNLGLRIDHVLLSAPLAAKCSAAGI-------DRAPRKLERPSDHAPVWA 251 Query: 301 DYD 303 + Sbjct: 252 EIS 254 >gi|224537627|ref|ZP_03678166.1| hypothetical protein BACCELL_02509 [Bacteroides cellulosilyticus DSM 14838] gi|224520769|gb|EEF89874.1| hypothetical protein BACCELL_02509 [Bacteroides cellulosilyticus DSM 14838] Length = 284 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 90/304 (29%), Gaps = 33/304 (10%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 ++A V + C+ KV ++S+NI + +S+ Q Sbjct: 8 SVLVAFVLLVASCSKQPEAKVDVMSFNIR-------LDHVADSLNNWKYRKDAAAQMITY 60 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 D+V +QE+ + + T K+ Sbjct: 61 YAPDVVGMQEVLKNQLDDLKNRLPQYTALGVGRADGKEKGEYCSLFYKTDRFDLVKSGNF 120 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 P + A R ++ +++GK++ + H F + S Sbjct: 121 GLSETPDSIGIKGWDAACERIVTWAVLKDKVSGKELAAFNTH-----FDHIGKVARRESA 175 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 LL + + + S +P VI GDFN ++ + + S Sbjct: 176 VLLLAKIREIA--------SDLPVVIMGDFNGTVDSDPISVLTEGGMQNTYSTSDVVYGP 227 Query: 242 DSRCN--ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + + ID+ ++ ++ F I D+ LSDH PI Sbjct: 228 AWSFHDFGRIPVEERQLIDFIFVNGQ----VVANKFRVIADKPDNG-----YLSDHAPIL 278 Query: 300 IDYD 303 + Sbjct: 279 ANLT 282 >gi|163737422|ref|ZP_02144839.1| Endonuclease/exonuclease/phosphatase [Phaeobacter gallaeciensis BS107] gi|161388948|gb|EDQ13300.1| Endonuclease/exonuclease/phosphatase [Phaeobacter gallaeciensis BS107] Length = 331 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 57/329 (17%), Positives = 103/329 (31%), Gaps = 49/329 (14%) Query: 24 VRLVSWNINTL----SEQEGVSLWKNSVKRTTSDYT----LLRQYAKNLDADIVFLQEMG 75 +RLV++N+ + + + + R D L + + LDAD + + E Sbjct: 1 MRLVTYNVEWFSSLFGADDTLLMDGGTSGRHGVDRDSQTRALAEVFQRLDADGIMVIEAP 60 Query: 76 SYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQS------- 127 N K + R ++ A K + V Sbjct: 61 DTNNRRKTLRALEHFAQEAGLRSTKAVIGFANDTQQEIAFLYDPKVLHVAHSPRESAAAP 120 Query: 128 -------YPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYS- 178 L + ++ +EL V NG ++I ++ HLKS + + ++ Sbjct: 121 RFDGVFHIDLDVDAQKDAVRFSKPPLELTVTTNGGREISLIGAHLKSKAPHGARSDDHAV 180 Query: 179 ----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-------- 226 + QA WL+ + Q + V+ GD N F + Sbjct: 181 TLSIANRRKQLAQAIWLRRRVEQLLAEGLDVVVMGDLNDGPGLDQYEQLFNRSSVEIAME 240 Query: 227 --TIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYK----FLIQESF 275 DPN + P+ + +A +DY ++ + + I F Sbjct: 241 SDLYDPNAQSLLQPRLRVMPSSARFYDKANKRYFSALLDYIMVSSGLRQPAANWRIWHPF 300 Query: 276 SEILYNEDDIKSRG-KRLSDHCPISIDYD 303 + ED SDH P+S+D D Sbjct: 301 EDAACYEDVALREALLAASDHFPVSLDLD 329 >gi|170697069|ref|ZP_02888165.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria IOP40-10] gi|170138243|gb|EDT06475.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria IOP40-10] Length = 604 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 45/316 (14%), Positives = 89/316 (28%), Gaps = 48/316 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRT--------TSDYTLLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ G+ + + K LDAD++ L E+ Sbjct: 293 LRVASFNVLNYFNGNGMGGGFDDPNNRGAKSFQEFQRQEAKIVSALKALDADVIGLMEIQ 352 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + S R+++ R + I A+ + V P+ A Sbjct: 353 NNGYGELSAVRQLAAKLGSNWRVVDPGMSRLGGDAITVAMIYDSRTVE------PVGRAS 406 Query: 135 DSFSRAGNRRAVELLVE---INGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLS 185 NR+ + N + + + HLKS D+ + + Sbjct: 407 TLAIDDKNRQPLAQSFRRVGGNKQALTIAVNHLKSKNCPDAANDDLDQGDGQGCWNPTRT 466 Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + A L DW+ + ++ GDFN + ++ + + Sbjct: 467 RAAAKLADWLAGTPTGVAGQGTLLIGDFNSYTYEDPI-----RLLESRGYRNLVSRWIGA 521 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIK 286 + +D+ + + I +E Sbjct: 522 NAYSYVYNGEAGYLDHALASLPLASHVKAVHEWHINADEPLALQYTLAYKSAEQQKTYYA 581 Query: 287 SRGKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 582 PDAYRSSDHDPVLIDI 597 >gi|332993545|gb|AEF03600.1| exodeoxyribonuclease III [Alteromonas sp. SN2] Length = 269 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 78/312 (25%), Gaps = 76/312 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++S+NIN + L+ DI+ LQE + + Sbjct: 1 MKVISFNING----------------IRARLHQLQALIDAHQPDIIGLQEIKVHNEQFPV 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +++ H +A K L+G A Sbjct: 45 EAVEAMGYHVYFH------------GQKSHYGVAFLAKKEPESV----LMGFPTDEEDAQ 88 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + +G+ + VL+ F + + + L ++ Sbjct: 89 RRMIILKTTDNDGQPVTVLN-----GYFPQGENEKHETKYPAKRKFYKDLMTYLDTHHTP 143 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 ++ GD N L + T+ F Sbjct: 144 DENVIVMGDVNISHTDLDIGIGEENKKRWLRTGKCSFLPEERVWLNTLMDWGFEDSFRTL 203 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + + +K L D ++ Sbjct: 204 NPDTTDRYSWFDYRSKGFNDNRGLRIDLILATPSMHKRLSDAGI-------DYELRGIEK 256 Query: 292 LSDHCPISIDYD 303 SDH PI Y Sbjct: 257 PSDHAPIWATYS 268 >gi|262043063|ref|ZP_06016204.1| exodeoxyribonuclease III [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039595|gb|EEW40725.1| exodeoxyribonuclease III [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 268 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 79/309 (25%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLAAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVARLGYNVFYHGQKGHYGVALLTKETPITVRR-----GFPDDGEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + + Q L++++ + Sbjct: 90 RIIMAEIPSPFGNVTVIN-----GYFPQGESRDHETKFPAKAAFYQNLQNYLETELNKEN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + + + Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLLTGKCSFLPEEREWMDRLLGWGLVDTWRQANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + ID + Q + ++ D ++ S Sbjct: 205 DNHEHFSWFDYRSKGFDDNRGLRIDLLLASQPLAQRCVETGI-------DYEIRGMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|159903026|ref|YP_001550370.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9211] gi|159888202|gb|ABX08416.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9211] Length = 277 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 90/306 (29%), Gaps = 71/306 (23%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83 + +WN+N + + + + ++ D++ LQE + + K+ Sbjct: 3 IATWNVN----------------SIRTRISQVEAFLSEVNPDLLCLQETKVEDASFPTKI 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + + + +A+ K+ + + + G + A Sbjct: 47 FEDKDYHL------------SFFGQKAYNGVALISKSPLKDVR-FGMSGELSNNPEAQYL 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ + ++++++ + L S + Y Q LK+++ + E Sbjct: 94 DEQKRVISTLLNGVRIINVYVPNGSSLTSDKYEYK------LQWLNCLKNYLDCQSERDE 147 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P + GDFN + K + + L + + N Sbjct: 148 PICLLGDFNIALEDKDIHNPNRLSGGIMASEPERKALRKLL--GERLEDIFRIFEQGTNH 205 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ + + + SDH P+ Sbjct: 206 WSWWDYRSGAWDRDRGWRIDHIYLSKELINHSKSCVIH-------KKSRGNIKPSDHAPV 258 Query: 299 SIDYDF 304 ++ D+ Sbjct: 259 LVEIDW 264 >gi|218768830|ref|YP_002343342.1| exodeoxyribonuclease III [Neisseria meningitidis Z2491] gi|121052838|emb|CAM09187.1| exodeoxyribonuclease III [Neisseria meningitidis Z2491] Length = 256 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 88/305 (28%), Gaps = 73/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + DI+ LQE Sbjct: 1 MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ +N + R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVH-----IGLPALPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V++++ + LDS + Y Q L +++ + Sbjct: 90 RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMARHG 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D +++ + + Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWFQNLLDLGLADSLRQVHPEGAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ + L D +R SDH P++ Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMAEALKDV-------RVDLETRALERPSDHAPVT 251 Query: 300 IDYDF 304 ++D+ Sbjct: 252 AEFDW 256 >gi|85709819|ref|ZP_01040884.1| Probable exodeoxyribonuclease III [Erythrobacter sp. NAP1] gi|85688529|gb|EAQ28533.1| Probable exodeoxyribonuclease III [Erythrobacter sp. NAP1] Length = 272 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 36/308 (11%), Positives = 80/308 (25%), Gaps = 67/308 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + L+++ + + LQE+ S + Sbjct: 5 MKIATYNING----------------IKARLPRLKEWLEETRPAVACLQEVKSQD----- 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK----NVRVLQQSYPLLGAKDSFSR 139 S + + +A+ Q + Sbjct: 44 -----KDFPASEFEELGYQAIWHGQKAFNGVAILADTKAGYSAKEVQRGLGIDGPKEGEG 98 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R +E+ V ++ I+L + + Y + + L+ + Q Sbjct: 99 EQARY-LEVDVTRESSTCRIVCIYLPNGNPQPGPKFDYKLA------WMEKLRGRMAQIW 151 Query: 200 ESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDS 243 ES VP + GDFN + + + + + Sbjct: 152 ESEVPAAVLGDFNVIPEDDDVFSVKAMASDALMQPESRAAYARLLADGWTDALRTHNPRG 211 Query: 244 RCNANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + ID+ ++ L+ D ++ SDH Sbjct: 212 GVWTYWDYQAGAWQRDHGFRIDHILLSPELADRLVSVGV-------DREHRGREKASDHA 264 Query: 297 PISIDYDF 304 P +F Sbjct: 265 PTWAKLNF 272 >gi|90423996|ref|YP_532366.1| exodeoxyribonuclease III [Rhodopseudomonas palustris BisB18] gi|90106010|gb|ABD88047.1| Exodeoxyribonuclease III [Rhodopseudomonas palustris BisB18] Length = 267 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 85/306 (27%), Gaps = 71/306 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAV 80 +R+ +WN+N L + K+ DIV LQE+ Sbjct: 4 PMRIATWNVN----------------SVRQRLDHLLVWLKDCAPDIVCLQEIKCVDEAFP 47 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + + +A+ K D +R Sbjct: 48 REAIEALGYNVVTH------------GQKTFNGVALLSKYPLEEATPRLAGDDDDLHARF 95 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +E +V + + V ++L + ++ + Y + L D+ ++ + Sbjct: 96 -----IEGVVSLKSGVVRVACLYLPNGNPPETEKYAYK------LKWMSRLLDYAKERLK 144 Query: 201 SLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRC 245 + P ++AGDFN + ++ + D+ Sbjct: 145 TEEPLILAGDFNVIPAPGDVYNPAAWVGDALFKPQTRESFQALLGLGLSDALRAVTDAPS 204 Query: 246 NANKNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 I ID+ ++ A L D ++ SDH P Sbjct: 205 QYTFWDYQAGAWQKNWGIRIDHLLLSPQAADRLTGVGI-------DKHVRSWEKPSDHVP 257 Query: 298 ISIDYD 303 + ID D Sbjct: 258 VWIDLD 263 >gi|301168642|emb|CBW28232.1| exonuclease III [Haemophilus influenzae 10810] Length = 267 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 86/311 (27%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + D++ LQE + Sbjct: 1 MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEAFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + +F+ H +A+ K + + +D+ R Sbjct: 45 EITENLGYHVFHH------------GQKGHYGVALLTKQEPKVVRRGFPTDNEDAQKR-- 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +E + ++ F + + L+ ++ ++ + Sbjct: 91 ---IIMADLETEFGLLTAIN-----GYFPQGESRAHETKFPAKEKFYADLQQYLEKEHDK 142 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 P +I GD N + L +++ + F K Sbjct: 143 SNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEERAWYQRLYDYGLEDSFRKL 202 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + ID+ ++ Q + + ++ Sbjct: 203 NPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAERCVDVGI-------ALDIRAMEK 255 Query: 292 LSDHCPISIDY 302 SDH PI ++ Sbjct: 256 PSDHAPIWAEF 266 >gi|238763171|ref|ZP_04624137.1| Exodeoxyribonuclease III [Yersinia kristensenii ATCC 33638] gi|238698670|gb|EEP91421.1| Exodeoxyribonuclease III [Yersinia kristensenii ATCC 33638] Length = 271 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 78/310 (25%), Gaps = 73/310 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ VS+NIN L + L + D++ LQE Sbjct: 3 TMKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDD 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 +FP + H +A+ KN + + +D+ Sbjct: 44 MFP-------LEEVSQHGYHVFYHGQKGHYGVALLTKNEPLAVRRGFPTDEEDA-----Q 91 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 RR + + + V++ F + + L+ ++ Q+ S Sbjct: 92 RRIIMADIATPQGPLTVIN-----GYFPQGESRDHPIKFPAKERFYADLQQYLEQQLSSD 146 Query: 203 VPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 +I GD N L + + + + F Sbjct: 147 AQVLIMGDVNISPTDMDIGIGEESRKRWLRTGKCSFLPEERAWLERLQNWGLVDTFRAAN 206 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID + I D ++ Sbjct: 207 PDCNDQFSWFDYRSRGFDENRGLRIDLLLASHPLAARCIATGI-------DYDIRSMEKP 259 Query: 293 SDHCPISIDY 302 SDH P+ ++ Sbjct: 260 SDHAPVWSEF 269 >gi|317478380|ref|ZP_07937544.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] gi|316905539|gb|EFV27329.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] Length = 283 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 84/310 (27%), Gaps = 43/310 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 I ++ + C KV ++S+NI + +S+ Q Sbjct: 6 INSVLVVFALLVASCGRQPEAKVEVMSFNIR-------LDHVADSMNNWKYRKDHAAQMI 58 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 DI+ +QE+ + + T K+ Sbjct: 59 AYYAPDIIGMQEVVKNQLDDLKERLPQYTALGVGRADGEEKGEYCSLFYKTDRFELLKSG 118 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSP 179 P K + A R ++ +++G++I + H F + Sbjct: 119 NFGLSETPDSIGKKGWDAACERIVTWAVLKDKVSGREIAAFNTH-----FDHVGKVARRE 173 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND--SLIRF 237 S L+ ++ + + +P ++ GDFN ++ + + Sbjct: 174 SAVLILEKIKQMA--------GDLPVIVTGDFNGTVDSEPV-----TVLTEGGMKNACVT 220 Query: 238 PKEKDSRCNANKNLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 K + + + ID+ + Y D K L Sbjct: 221 AKVAYGPTWSFHDFGRIPVEKRRLIDFIFIKGA---------VEVERYRTIDDKPDNGYL 271 Query: 293 SDHCPISIDY 302 SDH P+ Sbjct: 272 SDHAPVMAIL 281 >gi|315185421|gb|EFU19193.1| Endonuclease/exonuclease/phosphatase [Spirochaeta thermophila DSM 6578] Length = 311 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 37/299 (12%), Positives = 94/299 (31%), Gaps = 39/299 (13%) Query: 26 LVSWNINTLSEQEGVSLWKN--------SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + ++N+ L + + + ++ + + ++LDAD++ LQE+ + Sbjct: 25 VATYNVENLFDAVEDGAEYDEFRPSSFWTEEKVLVRLEAVSRVVRSLDADVLILQEVENE 84 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + ++ Y L +AV + + + L + + Sbjct: 85 RVLGRLVSGYLADAGYRWHFLPEEEGA-------VHVAVLSRIPVEGVRVHALKDPRVAV 137 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R VE+ + G+++++ +HL S + L++++ + ++ Sbjct: 138 ----LRSVVEVEYRLGGEQVFLFGVHLISRAGPAWRDEIRRNQLFLIARRLEEIRR---- 189 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS--RCNANKNLRNKI 255 ++ GDFN + + + F + + P D + + Sbjct: 190 -TAPGAHVLVGGDFNMEADEVETF--FDRALFPQDVHSVWSMMVPGTMPSGSYWYEGRWE 246 Query: 256 PIDYFVMDQNAYK----FLIQESFSEILYNEDDIKSRGKR-------LSDHCPISIDYD 303 ID F + + + D+ SDH P+ + Sbjct: 247 RIDGFFFTEGLRDGVGLDVTGGEVMAFPWLLDERGRPWSWDMGTGSGYSDHLPVKVILT 305 >gi|254458118|ref|ZP_05071544.1| endonuclease/exonuclease/phosphatase [Campylobacterales bacterium GD 1] gi|207084954|gb|EDZ62240.1| endonuclease/exonuclease/phosphatase [Campylobacterales bacterium GD 1] Length = 336 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 99/356 (27%), Gaps = 80/356 (22%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLW----------KNSVKRTT 51 ++ +L VF + + + + ++N+ L + E + K Sbjct: 1 MKSLLLLFVFL---TSLFGDKILTIATYNVENLFDLEKKGYKYKEYEPNTKSNWNQKTYK 57 Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 + + K++DADI+ LQE+ S A+ + Y I K Sbjct: 58 IKLQNIARVIKDIDADIIALQEIHSLQALKDLRFTLKQNGLYYQYYSIADKKH-----TA 112 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 +A+ K + + R +E ++I G +++ H K+ + Sbjct: 113 IKVAILSKLPFTYSKELSVTST------YKYRNILETKLKIYGNDLYMFVNHWKAKSGPE 166 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S+ T + S + V+ GDFN K D N Sbjct: 167 SMRITSAKSLRNRISEI-----------GYDENIVLLGDFNSDYEEHIKFKKNRKLNDTN 215 Query: 232 D--------------------------SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 + + K +D ++ Q Sbjct: 216 GKTGINHVLRTIKQNQKASNTKYEKENLYNLWYDTDAPNRYSYIFRGEKEALDNIIVSQP 275 Query: 266 AYKF----LIQESFSEI---------------LYNEDDIKSRGKRLSDHCPISIDY 302 I +S + + + E K +G SDH P+ + Sbjct: 276 LLDKKGISYINDSITNLDKEYLFKKKQIYRWQVSKERVPKHKGAGYSDHLPVIAKF 331 >gi|119383680|ref|YP_914736.1| exodeoxyribonuclease III Xth [Paracoccus denitrificans PD1222] gi|119373447|gb|ABL69040.1| Exodeoxyribonuclease III [Paracoccus denitrificans PD1222] Length = 261 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 81/305 (26%), Gaps = 70/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + L + D+V LQE+ + + Sbjct: 1 MKIATFNING----------------VRARIETLTGWLSEAQPDVVVLQEIKAQDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ +A+ K D +R Sbjct: 41 ------GFPREPIADLGYNIETHGQKGFNGVAILSKLPLEDVSRGLPGDETDEQARY--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E V + + + + ++L + + Y + + L+ + + Sbjct: 92 --IEATV-VGHRAVRIAGLYLPNGNPQPGPKFDYKLA------WMERLRARAKALLATEM 142 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P + GD+N + + + + + S Sbjct: 143 PVAMMGDYNVIPESRDAAFPEKWLDDALFQPESRAALRRILFDGWADAVRLRHPGSTRGP 202 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ A LI D + + SDH P+ Sbjct: 203 FTFWDYQAGAWQRDNGIRIDHVLLSPQAADLLIDVGI-------DRDERAKDKPSDHVPV 255 Query: 299 SIDYD 303 +D D Sbjct: 256 WVDLD 260 >gi|299144741|ref|ZP_07037809.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] gi|298515232|gb|EFI39113.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] Length = 611 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 82/305 (26%), Gaps = 64/305 (20%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M + ++L V + + +RL+++NI + + + + + Sbjct: 4 MKKIFLLISVILFIFPVQAQ-HTLRLMTYNIKNANGMDDICS-----------FQRVANV 51 Query: 61 AKNLDADIVFLQEMGSYNAVAK---VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 N D+V +QE+ S ++ V + I + Sbjct: 52 INNASPDVVAIQEVDSMTRRSRQKYVLGEIAERTQMHACFAPAIE----FEGGKYGIGLL 107 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 K V + Q+ PL G R R + E HL Sbjct: 108 TKQVPLRLQTIPLPG------REEARTLILAEFE----DYIYCCTHLSLTEED------- 150 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + + +K I K+ P +AGD N + + F Sbjct: 151 ------RMKSLEIVKSLIASYKK---PLFLAGDMNAEPESDFIK----------ELQKDF 191 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + K IDY + S + SDH P Sbjct: 192 QILSNPEKHTYPAPAPKETIDYIAASKQNATGFAVISARVVN---------EPMASDHRP 242 Query: 298 ISIDY 302 I ++ Sbjct: 243 ILVEL 247 >gi|255036462|ref|YP_003087083.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM 18053] gi|254949218|gb|ACT93918.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM 18053] Length = 265 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 80/283 (28%), Gaps = 49/283 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 Q+ +++++NI+ + D + + D V LQE+ + Sbjct: 29 QRFKVMTYNIHHCNPPSAGD---------KIDVEAIAKVINAEKPDFVALQEVDVNTERS 79 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + T SK + +AV K V Y L + Sbjct: 80 GKGKNQAQQLAALTGMKFYFSKAIDHQGGDYGVAVLTKFPIVDSAKYALPIRPELKEEDR 139 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 AV + + + +K+ HL QA+ + + Sbjct: 140 TIAAVTVQL-PDNRKLIFASTHLGLKEPN-------------RMLQAETI---WKHFGNT 182 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-NKIPIDYF 260 +P ++ GDFN + + + C + K ID+ Sbjct: 183 ELPMILGGDFNATPDSPVI-----------AFFDQHFTRSCTNCKPTIPVEVPKKTIDFI 231 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +++ + Y SDH P++ ++ Sbjct: 232 MHKKDSQLKSANTKVIDEKY-----------ASDHLPVTAEFT 263 >gi|148240155|ref|YP_001225542.1| exodeoxyribonuclease III [Synechococcus sp. WH 7803] gi|147848694|emb|CAK24245.1| Exodeoxyribonuclease III [Synechococcus sp. WH 7803] Length = 276 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 84/304 (27%), Gaps = 63/304 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ SWN+N + + + D++ LQE + + Sbjct: 1 MRIASWNVN----------------SVRTRLEHVLGWLDRNTIDVLALQETKVDDPL--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + + G + A Sbjct: 42 -------FPLKPFQERGYHLSIHGQKSYNGVALISRQP-LEDVRLGFTGELPGDADAEAL 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ I V+++++ + LDS + +Y L+ ++ + Sbjct: 94 GTQKRVISALVDGIRVVNLYVPNGSSLDSEKYSYK------LNWMGCLERYLRAAETRDE 147 Query: 204 PFVIAGDFNRKINYLGNNDD-------FWKTIDPNDSLI-------RFPKEKDSRCNANK 249 P + GDFN +D + + + + Sbjct: 148 PLCVVGDFNIGPEARDLHDPERLTGGIMASEAERKALVQVLGSNLGDAFRLFEPGSGHWS 207 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ + + + S D + ++ SDH P+ + Sbjct: 208 WWDYRSGAWNRDSGWRIDHIYISSDLQELARSCSI-------DKEERGREQPSDHAPVVV 260 Query: 301 DYDF 304 D + Sbjct: 261 DLAW 264 >gi|330941805|gb|EGH44552.1| exonuclease III [Pseudomonas syringae pv. pisi str. 1704B] Length = 270 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 35/314 (11%), Positives = 82/314 (26%), Gaps = 78/314 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDEQFPQ 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + H +A+ +N + +DS Sbjct: 45 AEVEALGYHVHFH------------GQKGHYGVALLSRNAPLALHKGFEGDDEDSQK--- 89 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + NG+ + +++ F + + + L+ + + + Sbjct: 90 -RFIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKRRFYENLQTLLEGQFRN 143 Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240 P ++ GD N ++L ++ + + + F Sbjct: 144 DQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRHL 203 Query: 241 KDSRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + ID + + + D Sbjct: 204 YPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSSGLQPRIKEAGV-------DYDLRGM 256 Query: 290 KRLSDHCPISIDYD 303 ++ SDH PI ++ Sbjct: 257 EKPSDHAPIWLELS 270 >gi|238751649|ref|ZP_04613139.1| Exodeoxyribonuclease III [Yersinia rohdei ATCC 43380] gi|238710211|gb|EEQ02439.1| Exodeoxyribonuclease III [Yersinia rohdei ATCC 43380] Length = 271 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 38/310 (12%), Positives = 76/310 (24%), Gaps = 73/310 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ VS+NIN L + L + D++ LQE Sbjct: 3 TMKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDD 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 +FP + H +A+ K + + +D+ Sbjct: 44 MFP-------LEDVSQHGYHVFYHGQKGHYGVALLTKEQPLAVRRGFPTDEEDA-----Q 91 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 RR + + + V++ F + + L+ ++ Q Sbjct: 92 RRIIMADIATPQGTLTVIN-----GYFPQGESRDHPIKFPAKQRFYADLQQYLEQHLSPE 146 Query: 203 VPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 +I GD N L + + + + F Sbjct: 147 SQVLIMGDINISPTDLDIGIGEESRKRWLRTGKCSFLPEERAWLEHLQSWGLVDTFRAAN 206 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID + Q I D ++ Sbjct: 207 PDCNDQFSWFDYRSRGFDENRGLRIDLLLASQPLAARCIATGI-------DYEIRGMEKP 259 Query: 293 SDHCPISIDY 302 SDH P+ ++ Sbjct: 260 SDHAPVWSEF 269 >gi|77163525|ref|YP_342051.1| endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC 19707] gi|254436414|ref|ZP_05049919.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani AFC27] gi|300115646|ref|YP_003762220.1| endonuclease/exonuclease/phosphatase [Nitrosococcus watsoni C-113] gi|76881839|gb|ABA56521.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC 19707] gi|207087948|gb|EDZ65222.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani AFC27] gi|299541588|gb|ADJ29899.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus watsonii C-113] Length = 398 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 49/288 (17%), Positives = 76/288 (26%), Gaps = 34/288 (11%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 AQ + SWN L + ++ D V LQE+ S Sbjct: 14 PTISAQAFTIASWNTKHLGWGD------------KRNWNATAAVVAPY--DFVALQEVMS 59 Query: 77 YNAVAKVFPKNTWCIF--YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 AV + +S+ R A R++ V + + L Sbjct: 60 KTAVNHLVQTLKKQTGVKWSSLVSGTSVGRSKRYQEFYAFIWREEAVDYVGGAVVYLDPG 119 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D F+ R + + K + + +QQ +W Sbjct: 120 DIFA----REPFAARFQTDNGKYRWTAATVH------VVYGDSRDERRREAQQLDEYVNW 169 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + P V+ GDFN + G D K + P AN Sbjct: 170 LEENVAEGDPVVLMGDFNLPPDSAGFRD-LAKVLKPAIREGATTLSAKEGRYANLY---- 224 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D +A K K K +SDH P+ I Sbjct: 225 ---DNIWYRPDALKIQEARIDRFPQRLGITHKLARKTVSDHAPVVIVL 269 >gi|134292654|ref|YP_001116390.1| endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis G4] gi|134135811|gb|ABO56925.1| Endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis G4] Length = 603 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 94/315 (29%), Gaps = 47/315 (14%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ N + + + R Y + + LDAD++ L E+ Sbjct: 293 LRVASFNVLNYFNGNGLGGGFDDPNNRGAKTYEEFQRQEAKIVSALQALDADVIGLMEIQ 352 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + S R+++ R + I A+ + V P+ A Sbjct: 353 NNGYGELGAVRQLAAKLGSHWRVVDPGTSRLGGDAIAVAMIYDSRTVE------PVGRAA 406 Query: 135 DSFSRAGNRRAVELLVEINGKK--IWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186 NR+ + G + + + HLKS D+ + + ++ Sbjct: 407 TLAIDERNRQPLAQSFRRIGGRHALTIAVNHLKSKNCPDAANDDLDQGDGQGCWNATRTR 466 Query: 187 QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A L DW+ + ++ GDFN + + ++ + + Sbjct: 467 AAVKLADWLAGAPTGVAGQGTLLIGDFNSYTHEDPI-----RMLESRGYRNLVSRWIGAN 521 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287 + +D+ + + I +E Sbjct: 522 AYSYVYNGEAGYLDHALASLPLAAHVKAVHEWHINADEPLALQYTLAYKSADQQKTYYAP 581 Query: 288 RGKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 582 DAYRSSDHDPVLIDI 596 >gi|307718261|ref|YP_003873793.1| endonuclease/exonuclease/phosphatase family protein [Spirochaeta thermophila DSM 6192] gi|306531986|gb|ADN01520.1| endonuclease/exonuclease/phosphatase family protein [Spirochaeta thermophila DSM 6192] Length = 311 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 39/299 (13%), Positives = 94/299 (31%), Gaps = 39/299 (13%) Query: 26 LVSWNINTLSEQEGVSLWKN--------SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + ++N+ L + + + ++ + + ++LDAD++ LQE+ + Sbjct: 25 VATYNVENLFDAVEDGAEYDEFRPSSFWTEEKVLVRLEAVSRVVRSLDADVLILQEVENE 84 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + ++ Y L +AV + + + L + Sbjct: 85 RVLGRLVSGYLADAGYRWHFLPEEEGA-------VHVAVLSRIPVEGVRVHALKDPR--- 134 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 A R VE+ + G+++++ +HL S + L++++ + ++ Sbjct: 135 -VAALRSVVEVEYRLGGEQVFLFGVHLISRAGPAWRDEIRRNQLFLIARRLEEIRR---- 189 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR--NKI 255 V ++ GDFN + + + F + + P D + Sbjct: 190 -TAPGVHVLVGGDFNMEADAVETF--FDRALFPQDVHSVWSMMVPGTMPPGSYWYEGRWE 246 Query: 256 PIDYFVMDQNAYK----FLIQESFSEILYNEDDIKSRGKR-------LSDHCPISIDYD 303 ID F + + + D+ SDH P+ + Sbjct: 247 RIDGFFFTEGLRDGVGLDVTGGEVVAFPWLLDERGRPWSWDMGTGSGYSDHLPVKVILT 305 >gi|56460629|ref|YP_155910.1| extracellular nuclease [Idiomarina loihiensis L2TR] gi|56179639|gb|AAV82361.1| Extracellular nuclease [Idiomarina loihiensis L2TR] Length = 589 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 92/313 (29%), Gaps = 40/313 (12%) Query: 20 VAQKVRLVSWNINTLSEQEGV------SLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + +R+ S+N+ GV ++ ++ + +DAD++ L E Sbjct: 284 SDKALRIASFNVLNFFNGNGVGQGFPTPRGADTPEQMQRQQKKIVAALTAIDADVIGLME 343 Query: 74 MGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + + +A+ ++ +++ + I I + + V+ + Sbjct: 344 IENDGFGERSAIMQLVKALEKASGKDYAIAEPRAEKIGTDQITVGIIYQPQRVKPNSHAI 403 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC-------FLDSLENTYSPSC 181 S+ + GK+ V+ H KS +S +N Sbjct: 404 FTRQGPFSWGSRPPLAQSFIDANT-GKEFSVVVNHFKSKGSCPEDSESPNSNQNDGQACW 462 Query: 182 SLLSQQ-AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + L Q ++ L WI + + V+ GDFN Sbjct: 463 NDLRLQSSRELIQWIQSESLANS--VLLGDFNAYYQEDPVRYFADNGFYNPSGAKD---- 516 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG---------KR 291 + +D+ + + + + +E + R Sbjct: 517 -----YSYVYDSQAGALDHVFVTDSLKDAIQEVYHLPFNADEPQLYDYRDEAYFAEGPFR 571 Query: 292 LSDHCPISIDYDF 304 SDH P+ +D F Sbjct: 572 SSDHDPLVLDLVF 584 >gi|329902691|ref|ZP_08273242.1| hypothetical protein IMCC9480_801 [Oxalobacteraceae bacterium IMCC9480] gi|327548636|gb|EGF33289.1| hypothetical protein IMCC9480_801 [Oxalobacteraceae bacterium IMCC9480] Length = 562 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 50/298 (16%), Positives = 90/298 (30%), Gaps = 34/298 (11%) Query: 31 INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AVAKVFPKNT 88 +N + ++ + D L LDAD++ L E+ + ++A + Sbjct: 2 LNYFTTLNQRGANSSAELKRQRD--KLVSTIVALDADVLGLMEIENTATVSLADLVAAVN 59 Query: 89 WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148 ST L+N ++ I A+ + V ++ Q + D G R V Sbjct: 60 AKTGASTYALVNSGTPGTD-AIKVAMIYKPARVSLIGQP-QVPADPDFGVDGGLRPPVAQ 117 Query: 149 LVEI--NGKKIWVLDIHLKS-FCFLDSLENTYSPSCS-----LLSQQAQWLKDWITQKKE 200 N W + HLKS S + +QA L W+ Q Sbjct: 118 RFAAIDNNGSFWFVVNHLKSKGSCPSSASSVDRDDGQGCWNVSRVRQASALNKWVGQLVA 177 Query: 201 S--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + ++ GDFN ++ KTI+ + S +D Sbjct: 178 NSGEADVLMVGDFNAYLHEDPI-----KTIEAAGFEDLLKRLPASDRYTYVFNGESGALD 232 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------KRLSDHCPISIDYD 303 + + + + I +E R SDH P+ + + Sbjct: 233 HGLASSKLSAQVTGVTVWHINADEPIALDYNTEFKTDDRYAVTPYRSSDHDPVLVGLN 290 >gi|120554411|ref|YP_958762.1| exodeoxyribonuclease III [Marinobacter aquaeolei VT8] gi|120324260|gb|ABM18575.1| Exodeoxyribonuclease III [Marinobacter aquaeolei VT8] Length = 270 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 32/285 (11%), Positives = 68/285 (23%), Gaps = 59/285 (20%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 + L + L+ D++ LQE + R + + Sbjct: 12 RTRLHQLEAVIQQLNPDVIGLQETKVTDE----------EFPVEAIRELGYHVHFHGQKT 61 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 H +A+ + +DS RR + +NG+ + V++ F Sbjct: 62 HYGVALLSRAKPEQVIKGYPSDGEDS-----QRRLITGHFTVNGEPLTVIN-----GYFP 111 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL------------ 218 + + L ++ + + ++ GD N Sbjct: 112 QGESRDHPVKFPAKEKFYADLMAYLDELTKKPGHILVMGDMNISPTDRDIGIGADNAKRW 171 Query: 219 ---------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----------PID 258 ++ ++ F N + ID Sbjct: 172 LRSGKCSFLPEEREWLGQVEQRGFTDVFRHLHPDEANTFSWFDYRSKGFERDPRRGLRID 231 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +R SDHCP+ +D Sbjct: 232 LIMASDSLLPKAKAAGV-------SYDIRAMERPSDHCPVWASFD 269 >gi|324007120|gb|EGB76339.1| exodeoxyribonuclease III [Escherichia coli MS 57-2] Length = 272 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 83/312 (26%), Gaps = 73/312 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++ VS+NIN L + L + D++ LQE Sbjct: 2 AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +FP + ++ H +A+ K + + Sbjct: 43 DDMFP-------LEEVTKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDGEE 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + + I V++ F + +Q Q L++++ + + Sbjct: 91 AQRRIIMAEIPSPLGNITVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELK 145 Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239 P +I GD N L ++ + + + F Sbjct: 146 RENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRH 205 Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + Q + ++ D + Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258 Query: 291 RLSDHCPISIDY 302 + SDH P+ + Sbjct: 259 KPSDHAPVWATF 270 >gi|300770191|ref|ZP_07080070.1| probable secreted protein [Sphingobacterium spiritivorum ATCC 33861] gi|300762667|gb|EFK59484.1| probable secreted protein [Sphingobacterium spiritivorum ATCC 33861] Length = 258 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 84/291 (28%), Gaps = 51/291 (17%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 F + Q ++++S+NI+ + + D + + + AD+V L Sbjct: 14 FTLCSPVFGQQPLKILSYNIHHGNPPSKPGV---------IDLEAIAKVIRTSGADVVGL 64 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 QE+ ++ + + SK + K + L Sbjct: 65 QEIDVNVGRSENVDQAKKLAELAGMEYYFFSKGIDLEKGEYGTVILSKFPITNTERLELP 124 Query: 132 GAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 ++ R ++I GK+I + HL Q ++ Sbjct: 125 MP----VKSEMRSLGIAKIKIPSGKEILFANTHLDLK-------------EENRIAQTKF 167 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + + +++ V+ GD N + ++ F + + Sbjct: 168 I---VNHFQDTKHLVVLVGDLNAQPQSEPI-KILGNFFKRSEITNGFTIPEVNPTRE--- 220 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 ID+ +++++ E Y SDH P+ + Sbjct: 221 ------IDFIMVNKSKNPKFQNHKVIEESY-----------ASDHRPVYAE 254 >gi|296135895|ref|YP_003643137.1| exodeoxyribonuclease III Xth [Thiomonas intermedia K12] gi|295796017|gb|ADG30807.1| exodeoxyribonuclease III Xth [Thiomonas intermedia K12] Length = 253 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 80/301 (26%), Gaps = 74/301 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+LS + + + D++ LQE Sbjct: 1 MKIATWNVNSLS----------------VRLPQVLDWLQAQSPDVLALQET--------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + + +A+ + Q G Sbjct: 36 -KLTDERFPHAELLNAGYHSVCLGQPTYNGVALLSRREAAEVQR----------GIPGFE 84 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A ++ + V+ + + DS + Y + L+ W+ + + Sbjct: 85 DAQARVIAATFGDLRVIGAYFPNGQAPDSDKFAYK------MRWLDALQAWVATELQRHA 138 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 + GDFN D +K + + F + D + Sbjct: 139 KVALMGDFNIAPEDRDVFDPVAWAGQIHCTPEERGHFKALLGLGLIDAF-RAFDQPPKSW 197 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ + L D + +R SDH P+ Sbjct: 198 SWWDYRNLAFRKNQGLRIDHILVSEGLRGSLQSCVI-------DKAPRKNERPSDHAPVI 250 Query: 300 I 300 Sbjct: 251 A 251 >gi|78185266|ref|YP_377701.1| exodeoxyribonuclease III xth [Synechococcus sp. CC9902] gi|78169560|gb|ABB26657.1| Exodeoxyribonuclease III [Synechococcus sp. CC9902] Length = 282 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 85/306 (27%), Gaps = 67/306 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N S + + + D++ LQE + + Sbjct: 1 MRIATWNVN----------------SVRSRLDQVLSWLEQAQPDLLCLQETKVDDPL--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +A+ + + +G D A Sbjct: 42 -------FPLQAFEAKGWRVHFHGQKSYNGVALVSRAP-LDDVRCGFVGELDKDPEAFEL 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ + V+++++ + L S + Y + + LK ++ Q + Sbjct: 94 GEQKRVISALIDGVRVVNLYVPNGSSLTSDKYPYK------LKWLRCLKRYLEQPLQRGE 147 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P + GDFN + + ++ L + + Sbjct: 148 PLCVVGDFNIALEARDMHDPDRLSGGIMASDPEREALQMALESG--LQDVFRVFEPDGGH 205 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ + + + ++ SDH P+ Sbjct: 206 WSWWDYRTGAWDRDRGWRIDHIYLCDELLGLARSCVIHKQV-------RGNEKPSDHAPV 258 Query: 299 SIDYDF 304 S+D D+ Sbjct: 259 SVDLDW 264 >gi|224540445|ref|ZP_03680984.1| hypothetical protein BACCELL_05358 [Bacteroides cellulosilyticus DSM 14838] gi|224517959|gb|EEF87064.1| hypothetical protein BACCELL_05358 [Bacteroides cellulosilyticus DSM 14838] Length = 364 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 37/328 (11%), Positives = 89/328 (27%), Gaps = 55/328 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSV-----------KRTTSDYTLLRQYAKNLD----AD 67 R+VS+N+ L + +L + + + + + Sbjct: 40 SFRVVSYNVENLFDCRHDTLKNDYEFLPDAMRHWNYTKYKKKLDAIARVITAVGGWTPPA 99 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 +V L E+ + + + + ++ + N + I A+ ++ +++ Sbjct: 100 LVALCEVENDSVLRDLTQRSVLREAGYRYVMTNSPDQ---RGIDVALLYQRDQFKLISHQ 156 Query: 128 -YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 P+ R + + + +N + + +HL S Y + Sbjct: 157 GIPIPHRSGKKKFRPTRDILHVCGMLLNSDTLDIFVVHLPSRSGGVKESEPYRLFAAE-- 214 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT--------IDPNDSLIRF 237 Q + D I + +I GDFN + N + P Sbjct: 215 -QLKAAVDSICSYRYHPQ-ILIMGDFNDYPDNASVNKILSAEAPPQNGDSLQPQKLYHLL 272 Query: 238 PKEK--DSRCNANKNLRNKIPIDYFVMDQNAYK--------FLIQESFS----------- 276 ++ + K +D+ ++ + + F Sbjct: 273 ARKSAIRKHFGSYKYQGEWGLLDHIIVSGTLLQPDADFCTGEDKADVFHSSFLLTEDKKY 332 Query: 277 --EILYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P+ D+ Sbjct: 333 GGVQPFRTYYGMKYQGGYSDHLPVWADF 360 >gi|223043633|ref|ZP_03613677.1| sphingomyelin phosphodiesterase [Staphylococcus capitis SK14] gi|222442911|gb|EEE49012.1| sphingomyelin phosphodiesterase [Staphylococcus capitis SK14] Length = 329 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 43/318 (13%), Positives = 97/318 (30%), Gaps = 33/318 (10%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 +LA + +++ + N+ L +L+ N + +D Y + Sbjct: 20 SLLLAFSTITYANESKSEDSLKITTHNVYFLPT----ALYPNWGQSQRADLISKADYIQ- 74 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIA 115 D D+V E+ A ++ Y T + + + Sbjct: 75 -DQDVVIFNELFDKKASNRLLTNLQSQYPYQTPIVGKGTDGWQQTSGTYRKVKPVSGGVG 133 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + K + Q+ + + +AGN+ + + NGK ++ HL++ + Sbjct: 134 IVSKWPIIEQEQH-IYKKGCGADKAGNKGFAYIKINKNGKYQHIIGTHLQA----EDPIC 188 Query: 176 TYSPSCSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + Q +K +I + P I GD N I ++ + Sbjct: 189 IKGKDKKIRQSQMDEIKQFIKDKHIPKNEPIYIGGDLNV-IKGSEEYQQMSDNLNVSLPT 247 Query: 235 IRFPKEKDSRCNANKNLRN------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 +N + +DY ++D++ + + + + + Sbjct: 248 QFEGNAYSWDTQSNDIAKYNYPKLEPQHLDYILLDRDHAQPSSWHNKVHKVKSPEWSVKS 307 Query: 289 GKR------LSDHCPISI 300 + SDH P+S Sbjct: 308 WGKTYKYNDYSDHYPLSA 325 >gi|157376913|ref|YP_001475513.1| hypothetical protein Ssed_3781 [Shewanella sediminis HAW-EB3] gi|157319287|gb|ABV38385.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3] Length = 381 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 37/346 (10%), Positives = 96/346 (27%), Gaps = 63/346 (18%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 ++ +++ ++N+ E G + ++ + Y D++ QE+ + Sbjct: 34 ASELIKIATFNLFNFIEPPGAFYEFENIYTQEQWQKKLDWIATYINEHQPDVIGFQEVFT 93 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR---VLQQSYPLLGA 133 +A+A++ + +++ + A+A R V Sbjct: 94 PDALAQL-TQRCGLEYFAVLDTPEVVDDFIYSKPVVALASRYPITEVHNVTVGDGWASMM 152 Query: 134 KDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLEN----------------- 175 +R+ + + + + +H KS L + Sbjct: 153 GLQDDFGFSRKPLRVTISLPKLGSCDCYVVHFKSKRPLFDAQELNGLTTPSADSSGGNVG 212 Query: 176 --------TYSPSCSLLSQQAQWLK-DWITQKKESLVPFVIAGDFNRKINY--------- 217 S +A L+ + ++ ++ P V+ GDFN ++ Sbjct: 213 QLLSIEALAQWGSSIQRGCEAALLRYSMVERRTQTGNPMVLMGDFNDILSDGVLASLTSV 272 Query: 218 ------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN--------ANKNLRNKIPIDYFVMD 263 + + + + + S+ + + +DY ++ Sbjct: 273 DTRIKPDPLLGEVEHQLRDHRLKDAYELYQSSQYSLSCQQRPATHYYFAKGSVLDYILLS 332 Query: 264 QNAYKFLIQESFSEILYNEDD------IKSRGKRLSDHCPISIDYD 303 + Y D R + +DH P+ I Sbjct: 333 SEFDIKNSRSLAEVGRYETYDRHLINPRFERDSQSTDHAPVMITIS 378 >gi|83953786|ref|ZP_00962507.1| exodeoxyribonuclease III [Sulfitobacter sp. NAS-14.1] gi|83841731|gb|EAP80900.1| exodeoxyribonuclease III [Sulfitobacter sp. NAS-14.1] Length = 265 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 88/307 (28%), Gaps = 67/307 (21%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +++ ++NIN + L Q+ + D+ LQE+ S Sbjct: 2 QGAAMKIATFNING----------------IKARIDALPQWLDDAQPDVAILQEIKS--- 42 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 V + FP+ + ++ +A+ K D +R Sbjct: 43 VDEGFPRELF-------EDRGYNVETHGQKSFNGVAILSKLPLEDVTRGLPGDDSDEQAR 95 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 +E V + + + ++L + + Y + Q L+D Sbjct: 96 Y-----IEATVVGDHSSVRLCGLYLPNGNPAPGPKYDYKLA------WMQRLEDRARALL 144 Query: 200 ESLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 PF++ GDFN + + W+ + F Sbjct: 145 AEETPFLLTGDFNIIPQAEDAATPDAWREDALFRPESRAAWRRLLALGLTEAFRARTQGP 204 Query: 245 CNANKNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + N I ID+F++ L D ++ SDH Sbjct: 205 GHYSFWDYQAGAWNRNNGIRIDHFLLSPAIADSLRDCQI-------DKDVRGREKPSDHV 257 Query: 297 PISIDYD 303 P+ ++ D Sbjct: 258 PVWVELD 264 >gi|326798265|ref|YP_004316084.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] gi|326549029|gb|ADZ77414.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] Length = 259 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 98/309 (31%), Gaps = 59/309 (19%) Query: 1 MI--RKYVLALVFFLVPCTA----SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54 M+ R ++ + L+ S QK++++S+NI+ ++ Sbjct: 1 MMQARNVIMIFIALLLLIVQVERISAQQKLKIMSYNIHHGADAN-----------EQDQL 49 Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 + + K ADIV LQE+ S + + + +++ + + Sbjct: 50 EAMAAFIKESGADIVGLQEVDSMCRRSGNVDQPRVLAQKTGM-HYTYTRHFAYDGGSYGQ 108 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 A+ + + L + + + V + + + +HL Sbjct: 109 ALLSRFPIERTVNERLPVSTGATTSFLTAEVVV----PTHRTLSIGVVHLDY-------- 156 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + + +QA+ + I ++ PF++ GD N + + + I Sbjct: 157 ----RAEAGRLRQAEIIDSIIK---KASHPFILTGDMNAEPQHETLAVLSKQLIATQGR- 208 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 K IDY ++D+ +I+ +L+ SD Sbjct: 209 ---------DAFTYPTAPPKKKIDYIMLDKRLKASVIEAKVLPVLF------------SD 247 Query: 295 HCPISIDYD 303 H PI + Sbjct: 248 HLPIVSTIE 256 >gi|114047106|ref|YP_737656.1| PKD domain-containing protein [Shewanella sp. MR-7] gi|113888548|gb|ABI42599.1| PKD domain containing protein [Shewanella sp. MR-7] Length = 948 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 92/337 (27%), Gaps = 56/337 (16%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDADI 68 + +++ S+N+ +G + + + + AD+ Sbjct: 451 SPVLAEGGNLKVASFNVLNYFNGDGQGGGFPTARGANTLSEFERQKAKIVSAMVGISADV 510 Query: 69 VFLQEMGSYNA------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L E+ + + +N + N S ++ I + Sbjct: 511 FGLMEIENDGFGANSAIADLVAGLNAAVGENRYDYVIPKVNGSNLSAIGTD-AITVGLIY 569 Query: 117 RKKNV-------RVLQQSYPLLG-AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK--- 165 R V + + PL + F + NR + +NG + V+ Sbjct: 570 RSDKVSPQGDARILSSANSPLDDAGQPLFDDSKNRPMLTQAFALNGSEESVVVAVNHLKS 629 Query: 166 --SFCFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 S C D N +C+ ++ A WI + ++ GD N Sbjct: 630 KGSECAGDPDMNDGQGNCNITRTRAATAAGQWIAAQYPE-QGVLLIGDLNSYAKEDP--- 685 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + F K + + + +D+ + + ++ + I +E Sbjct: 686 --LSALANAGFSELFAKLEKANPYSYVFSGESGQLDHALANAALVDKVLDVTEWHINTDE 743 Query: 283 DDIKSRG-----------------KRLSDHCPISIDY 302 + R SDH P+ I Sbjct: 744 PRVLDYNEEFKTAAQVQDLYASDAYRSSDHDPVVISL 780 >gi|227821924|ref|YP_002825894.1| exodeoxyribonuclease III protein [Sinorhizobium fredii NGR234] gi|227340923|gb|ACP25141.1| exodeoxyribonuclease III protein [Sinorhizobium fredii NGR234] Length = 319 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 88/306 (28%), Gaps = 69/306 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++ +WNIN + L + K + DI LQE+ S + Sbjct: 59 PMKIATWNING----------------VKARLDGLVAWLKASNPDIACLQEIKSVDDA-- 100 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + +A+ K D SR Sbjct: 101 --------FPREEIEALGYHIETHGQKGFNGVALLSKLRPDEVNRGLPGDDSDEQSRF-- 150 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +E + + G + V ++L + + + + Y Q L + ++ Sbjct: 151 ---IEGVFSVAGGAVRVCCLYLPNGNPVGTEKYPYK------LGWMQRLASFAKERLLLE 201 Query: 203 VPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++AGD+N +L ++ + N L + Sbjct: 202 EPLILAGDYNVIPEAHDCWDVNVWRNDALFLPETRAAFRQL-RNLGLTDAVRATTDEVPL 260 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ A L+ S + + ++ SDH P+ Sbjct: 261 YSFWDYQAGCWQKNFGIRIDHLMLSPEAVDKLVSTSIEKHV-------RAWEKPSDHVPV 313 Query: 299 SIDYDF 304 + + F Sbjct: 314 AAQFAF 319 >gi|152969774|ref|YP_001334883.1| exonuclease III [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|330012539|ref|ZP_08307413.1| exodeoxyribonuclease III [Klebsiella sp. MS 92-3] gi|150954623|gb|ABR76653.1| exonuclease III [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|328533786|gb|EGF60471.1| exodeoxyribonuclease III [Klebsiella sp. MS 92-3] Length = 268 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 79/309 (25%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLAAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVARLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPDDGEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + + Q L++++ + Sbjct: 90 RIIMAEIPSPFGNVTVIN-----GYFPQGESRDHETKFPAKAAFYQNLQNYLETELNKEN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + + + Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLLGWGLVDTWRQANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + ID + Q + ++ D ++ S Sbjct: 205 DNHEHFSWFDYRSKGFDDNRGLRIDLLLASQPLAQRCVETGI-------DYEIRGMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|33861041|ref|NP_892602.1| exodeoxyribonuclease III [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33639773|emb|CAE18943.1| exodeoxyribonuclease III [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 281 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 89/304 (29%), Gaps = 69/304 (22%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + +WN+N + + + + K ++ DI+ LQE + FP Sbjct: 3 IATWNVN----------------SVRTRLSQIINWIKEVNPDILCLQE---TKVIDDAFP 43 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS---YPLLGAKDSFSRAGN 142 + + + + +A+ K + S Sbjct: 44 SSHFEEL-------GYEVIIHGQKSYNGVAIISKFKIENVKKGFTNENKTGGISIDINEQ 96 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +R + + + ++++++ + +DS + Y Q +L ++ + ++ Sbjct: 97 KRLISAEIN----GLKIINVYVPNGSSIDSEKYDYK------IQWLNYLSAFLDDQVKND 146 Query: 203 VPFVIAGDFNRKINYLGNNDD-------FWKTIDPN-------DSLIRFPKEKDSRCNAN 248 + GDFN + + + I+ I + + Sbjct: 147 DLVCLVGDFNIAPSEIDIHTPQKYEGGIMASKIEREALNNVLKGRFIDSFRIFEKNTGHW 206 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ + +N L + + + SDH P+ Sbjct: 207 SWWDYRNNAYELNKGWRIDHIYISKNLSSKLKSCVI-------ERNQRENLQPSDHAPVL 259 Query: 300 IDYD 303 I+ + Sbjct: 260 INLE 263 >gi|222085777|ref|YP_002544307.1| exodeoxyribonuclease III protein [Agrobacterium radiobacter K84] gi|221723225|gb|ACM26381.1| exodeoxyribonuclease III protein [Agrobacterium radiobacter K84] Length = 263 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 92/306 (30%), Gaps = 70/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + L Q+ K+ D DI LQE+ + V + Sbjct: 1 MKIATWNING----------------VKARIENLCQWLKDSDPDIACLQEIKT---VDEG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + +A+ K D +R Sbjct: 42 FPRLE-------IEALGYHVETHGQKGFNGVAILSKAKPDEVTRGLPGDDSDEQARF--- 91 Query: 144 RAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +E + + + V ++L + +D+ + Y + + L+ + + Sbjct: 92 --IEAVFSVPDHGALRVCCLYLPNGNPVDTEKYPYKLA------WMERLRKFAADRLALE 143 Query: 203 VPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++AGD+N +L ++ ++ N + Sbjct: 144 EPIILAGDYNVIPEPHDCFDPKVWENDALFLPQTRQAFRQLE-NLGFTDAVRTTTDAVKL 202 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ A L + + ++ SDH P+ Sbjct: 203 YSFWDYQAGAWPKNNGIRIDHLMLSPEAADRLTSTAIEKH-------MRAWEKPSDHVPV 255 Query: 299 SIDYDF 304 DF Sbjct: 256 IAHLDF 261 >gi|152980157|ref|YP_001354134.1| exodeoxyribonuclease III [Janthinobacterium sp. Marseille] gi|151280234|gb|ABR88644.1| exodeoxyribonuclease III [Janthinobacterium sp. Marseille] Length = 254 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 30/303 (9%), Positives = 83/303 (27%), Gaps = 72/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + Q+ + D++ LQE + N Sbjct: 1 MKIATWNVNSL----------------KVRLPQVLQWLTDNPVDVLCLQETKTVNE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ ++ F R Sbjct: 41 ------KFPLAEIEAAGYHVVYTGQKTYNGVAILSRHPIDDVVKN-----NPLFDDEHQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + + ++ ++ + L+S + Y + L + + + + Sbjct: 90 IIIGTI-----QGVRIICAYIPNGQSLESDKYQYK------LRWLAGLHELLAHELKQHE 138 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANK 249 + GD+N +D + + + + Sbjct: 139 NVALLGDYNIAPEDRDVHDPVAWQGQVLVSEPERAAFVRMQEMGFTDAFRMFEQAEKLYS 198 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ + K D + + ++ SDH P+ Sbjct: 199 WWDYRQMGFRLNRGLRIDHILLSPSLAKRCTACVI-------DKVPRKWEQPSDHTPVIA 251 Query: 301 DYD 303 D Sbjct: 252 TLD 254 >gi|331647243|ref|ZP_08348337.1| exodeoxyribonuclease III [Escherichia coli M605] gi|331044026|gb|EGI16162.1| exodeoxyribonuclease III [Escherichia coli M605] Length = 272 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 83/312 (26%), Gaps = 73/312 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++ VS+NIN L + L + D++ LQE Sbjct: 2 AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +FP + ++ H +A+ K + + Sbjct: 43 DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPISVRR-----GFPGDDEE 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + + I V++ F + +Q Q L++++ + + Sbjct: 91 AQRRIIMAEIPSPLGNITVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELK 145 Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239 P +I GD N L ++ + + + F Sbjct: 146 RENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRH 205 Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + Q + ++ D + Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258 Query: 291 RLSDHCPISIDY 302 + SDH P+ + Sbjct: 259 KPSDHAPVWATF 270 >gi|302186191|ref|ZP_07262864.1| exonuclease III [Pseudomonas syringae pv. syringae 642] Length = 270 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 35/314 (11%), Positives = 82/314 (26%), Gaps = 78/314 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDEQFPQ 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + H +A+ +N + +DS Sbjct: 45 AEVEALGYHVHFH------------GQKGHYGVALLSRNAPLALHKGFEGDDEDSQK--- 89 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + NG+ + +++ F + + + L+ + + + Sbjct: 90 -RFIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQTLLESQFRN 143 Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240 P ++ GD N ++L ++ + + + F Sbjct: 144 DQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKSWGLVDTFRHL 203 Query: 241 KDSRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + ID + + + D Sbjct: 204 YPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKEAGV-------DYDLRGM 256 Query: 290 KRLSDHCPISIDYD 303 ++ SDH PI ++ Sbjct: 257 EKPSDHAPIWLELS 270 >gi|163857201|ref|YP_001631499.1| putative exodeoxyribonuclease III [Bordetella petrii DSM 12804] gi|163260929|emb|CAP43231.1| putative exodeoxyribonuclease III [Bordetella petrii] Length = 260 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 32/303 (10%), Positives = 78/303 (25%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N+L + + D + LQE Sbjct: 1 MKLATWNVNSL----------------KVRLPQVLDWLAANPVDALCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ + + Sbjct: 35 LKLTDENFPLDAFTQLGYHAAWAGQKTYNGVAILSREPGAAMVRNI------PGMDDPQQ 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + + V+ + + L+S + Y Q L+DW+ Q+ ++ Sbjct: 89 RLLAVTLPSPAGDVRVISAYCPNGQALESDKYAYK------LNWFQQLRDWLAQEIQTYP 142 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + GD+N ++ + F + + + Sbjct: 143 RLALLGDYNVAPADEDVHNPAKWEGQVLVSEPERAAFRALLDLGLADSF-RLFEQPEKSF 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ Q + D ++ SDH P+ Sbjct: 202 SWWDYRQFAFRRNAGLRIDHILLSQPLVPHCVACVI-------DKAPRANEQPSDHAPVV 254 Query: 300 IDY 302 Sbjct: 255 ATL 257 >gi|73540148|ref|YP_294668.1| endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134] gi|72117561|gb|AAZ59824.1| Endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134] Length = 262 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 98/286 (34%), Gaps = 51/286 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--- 79 K+R+V++NI+ + +R +DADIVFLQE+ N Sbjct: 3 KLRVVTYNIH----------KGVTGIARRPRIQNVRAGLHAMDADIVFLQEVQDRNDRLV 52 Query: 80 VAKVFPKNTWCIFY---STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 A +F + + Y + + + H A+ ++ ++ ++ + S Sbjct: 53 AAALFDPDHTQLNYLATDSYPHSVYGRNAVYEHGHHGNAILSRHPILMSENLDI-----S 107 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R R + + ++NG + ++ +H F ++QA+ L + + Sbjct: 108 DHRFEQRGLLHAVADVNGVEAHLICVHFGLF-------------ARSRARQAEALVERVR 154 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 S P VIAGDFN + I + + +R + + Sbjct: 155 TVVPSTAPLVIAGDFNDWNHR------LDSQICNTLGAVEASHARGARLHTFPSHMPWWQ 208 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + F + + +R SDH P+ + Sbjct: 209 LDRIYVRG----------FEIERAHALTGRDWAQR-SDHVPLVAEL 243 >gi|119899170|ref|YP_934383.1| exodeoxyribonuclease III [Azoarcus sp. BH72] gi|119671583|emb|CAL95496.1| exodeoxyribonuclease III [Azoarcus sp. BH72] Length = 253 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 32/302 (10%), Positives = 80/302 (26%), Gaps = 72/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + + D + LQE Sbjct: 1 MKIATWNVNSL----------------KVRLPHVLDWLAANQPDALCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ + + +A+ + + Sbjct: 35 LKLEDKGFPVAELQAAGYNAVFNGQKTYNGVAILSPHPLEDVVR------DIPGFSDEQK 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + ++ + + + S + Y + L +W+ + + Sbjct: 89 RIIAATVN----GVRIVCGYFPNGQAVGSDKFEYK------LRWLGALTEWLRAELTAHP 138 Query: 204 PFVIAGDFNRKINYLG-------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 V+ GDFN + + + F + D A Sbjct: 139 RLVLGGDFNIAPEDRDAHPDWKDEIHVSAPERAAFTALTALGLVDAF-RLYDQPERAFSW 197 Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 ++ ID+ ++ + D + +R SDH P+ +D Sbjct: 198 WDYRMGAFRRNFGLRIDHLLVSPALQPACRACTV-------DKAPRKLERPSDHAPVVLD 250 Query: 302 YD 303 + Sbjct: 251 LE 252 >gi|304411405|ref|ZP_07393019.1| PKD domain containing protein [Shewanella baltica OS183] gi|307305273|ref|ZP_07585021.1| PKD domain containing protein [Shewanella baltica BA175] gi|304350260|gb|EFM14664.1| PKD domain containing protein [Shewanella baltica OS183] gi|306911576|gb|EFN42001.1| PKD domain containing protein [Shewanella baltica BA175] Length = 944 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 97/326 (29%), Gaps = 50/326 (15%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDADIVFLQEM 74 +++ S+N+ +G + + + + AD+ L E+ Sbjct: 457 GGNLKVASFNVLNYFNGDGQGAGFPTARGANTLSEFDRQKAKIVSAMVGISADVFGLMEI 516 Query: 75 GS-----YNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNV------ 121 + +A+A + + + I + + I + R V Sbjct: 517 ENDGFGANSAIADLVAGLNAAVGEARYAYIAPTGMNAIGTDAITVGLIYRSDKVTPQGAA 576 Query: 122 -RVLQQSYPLLGA-KDSFSRAGNRRAVELLVEINGKK--IWVLDIHLKSF---CFLDSLE 174 + + PL K F + NR + +NG + + V HLKS C D Sbjct: 577 RILSSANSPLDSDQKPLFDDSKNRPMLTQAFSVNGSEEGVVVAVNHLKSKGSECAGDPDL 636 Query: 175 NTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 N +C+ ++ A WI+++ ++ GD N + Sbjct: 637 NDGQGNCNITRTRAATAAGQWISEQYP-DQGVLLIGDLNAYAKEDP-----LTALGNAGF 690 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG---- 289 F K + + +D+ + + ++ + I +E + Sbjct: 691 SELFAKLEKPNPYSYVFSAESGQLDHALANAALLDKVVDVTEWHINTDEPRVLDYNEEFK 750 Query: 290 -------------KRLSDHCPISIDY 302 R SDH P+ I Sbjct: 751 TPAQIQDLFATDAYRSSDHDPVVISL 776 >gi|288935952|ref|YP_003440011.1| exodeoxyribonuclease III [Klebsiella variicola At-22] gi|288890661|gb|ADC58979.1| exodeoxyribonuclease III [Klebsiella variicola At-22] Length = 268 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 80/309 (25%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLAAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K+ + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKDTPIAVRR-----GFPDDGEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + + Q L++++ + Sbjct: 90 RIIMAEIPSPFGNVTVIN-----GYFPQGESRDHETKFPAKAAFYQNLQNYLETELNKEN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + + + Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLLGWGLVDTWRQANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + ID + Q + ++ D ++ S Sbjct: 205 DNQEHFSWFDYRSKGFDDNRGLRIDLLLASQPLAQRCVETGI-------DYEIRGMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|260597606|ref|YP_003210177.1| exonuclease III [Cronobacter turicensis z3032] gi|260216783|emb|CBA30234.1| Exodeoxyribonuclease III [Cronobacter turicensis z3032] Length = 268 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 79/311 (25%), Gaps = 75/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +S+NIN L + L + D++ LQE + Sbjct: 1 MKFISFNINGL----------------RARPHQLAALVEQHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K V + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKATPVSVRR-----GFPGDDEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + I V++ F ++ ++ Q L+D++ + Sbjct: 90 RIIMAEIPSAIGDITVIN-----GYFPQGESRDHAVKFPAKAKFYQDLQDYLETALSNDK 144 Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 P +I GD N + + ++ F Sbjct: 145 PVLIMGDMNISPGDLDIGIGEESRKRWLRTGKCSFLPEEREWMGRLLN-WGLKDTFRHAN 203 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID + L++ D ++ Sbjct: 204 PDITDRYSWFDYRSKGFDDNRGLRIDLLLASDPLMARLVETGI-------DYDIRAMEKP 256 Query: 293 SDHCPISIDYD 303 SDH P+ + Sbjct: 257 SDHAPVWATFS 267 >gi|26398005|sp|P59116|PHL2_LEPIN RecName: Full=Sphingomyelinase C 2; AltName: Full=Sphingomyelin phosphodiesterase 2; Short=SMase 2; Flags: Precursor Length = 623 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 42/293 (14%), Positives = 95/293 (32%), Gaps = 25/293 (8%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++++S N+ L + W N + Y K + D++ +E +A Sbjct: 154 EIKVLSHNVFMLPTN--LPRWGNLGHDERAKRISKSDYVK--NQDVIVFEEAFDTSARKI 209 Query: 83 VFPKNTWCIFYST--------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + Y T + S + ++ + + K + Y + Sbjct: 210 LLDNLREEYPYQTDVVGRTKKNWDASLGNFRSYSLVNGGVVILSKWPIEEKIQYIFNDSG 269 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 N+ V + + GKK V+ H +S +N + + Q ++++ Sbjct: 270 CGADWFANKGFVYVKINKEGKKFHVIGTHAQS-----QDQNCSNLGIPNRANQFDDIRNF 324 Query: 195 I-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN----ANK 249 I ++ +I GD N D + + P D++ N Sbjct: 325 IYSKNIPKDETVLIVGDLNVIKESNEYYDMISRLNVNEPRYVGVPFTWDAKTNEIAAYYY 384 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---LSDHCPIS 299 + +DY + ++ + + ++ + ++ G SDH PI Sbjct: 385 ENEEPVYLDYIFVSKSHAQPPVWQNLAYDPVSKQTWTVSGYTSDEFSDHYPIY 437 >gi|115372829|ref|ZP_01460134.1| putative hemagglutinin-related protein [Stigmatella aurantiaca DW4/3-1] gi|310818499|ref|YP_003950857.1| endonuclease/exonuclease/phosphatase domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115370096|gb|EAU69026.1| putative hemagglutinin-related protein [Stigmatella aurantiaca DW4/3-1] gi|309391571|gb|ADO69030.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella aurantiaca DW4/3-1] Length = 526 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 39/291 (13%), Positives = 91/291 (31%), Gaps = 26/291 (8%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + + +WN+ + + +R + D LQE+ + +A+ Sbjct: 248 PLSVGNWNLEWFGSTTNGPSDDSLQ------LSNVRAVMADAGIDFWALQEVVNAGTLAQ 301 Query: 83 V-FPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + F + + + + + ++ A+ + V+VL L F+ Sbjct: 302 LKQAMPGYDGFAANDSRVIYGASYYTASEQKPAVLFKSGTVQVLTAEIILTHFNYEFAGR 361 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + L V + + I L +++ + LK ++ + Sbjct: 362 PP-LQLRLRVTRGNTSLEMFAIILHMKAQTGGIDDYNQRKAAG-----AALKQYLDSQLS 415 Query: 201 SLVPFVIAGDFNRKINYLGNND-------DFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 V ++ GD+N ++ D + ++ S S + Sbjct: 416 -NVRVIVLGDWNDDVDISIYRDSGSYLPSPYQNFVEAPASYQFLTM-PLSVSGVGSTVGY 473 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ ++ + + S + I + SDH PI +DF Sbjct: 474 STFIDHQLISNELFGDYVGNSTQVLY---PAIPNYANTTSDHYPIQSRFDF 521 >gi|227885825|ref|ZP_04003630.1| exodeoxyribonuclease III [Escherichia coli 83972] gi|301050910|ref|ZP_07197761.1| exodeoxyribonuclease III [Escherichia coli MS 185-1] gi|26108407|gb|AAN80609.1|AE016761_184 Exodeoxyribonuclease III [Escherichia coli CFT073] gi|227837398|gb|EEJ47864.1| exodeoxyribonuclease III [Escherichia coli 83972] gi|300297429|gb|EFJ53814.1| exodeoxyribonuclease III [Escherichia coli MS 185-1] gi|307553768|gb|ADN46543.1| exodeoxyribonuclease III [Escherichia coli ABU 83972] Length = 272 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 84/312 (26%), Gaps = 73/312 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++ VS+NIN L + L + D++ LQE Sbjct: 2 AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +FP + ++ H +A+ K + + Sbjct: 43 DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEE 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + + + V++ F + S +Q Q L++++ + + Sbjct: 91 AQRRIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFSAKAQFYQNLQNYLETELK 145 Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239 P +I GD N L ++ + + + F Sbjct: 146 RENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRH 205 Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + Q + ++ D + Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258 Query: 291 RLSDHCPISIDY 302 + SDH P+ + Sbjct: 259 KPSDHAPVWATF 270 >gi|253997518|ref|YP_003049582.1| exodeoxyribonuclease III Xth [Methylotenera mobilis JLW8] gi|253984197|gb|ACT49055.1| exodeoxyribonuclease III Xth [Methylotenera mobilis JLW8] Length = 256 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 30/303 (9%), Positives = 84/303 (27%), Gaps = 72/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N+L+ + + D++ LQE ++ Sbjct: 1 MKLATWNVNSLN----------------VRLPHVLDWLTANQPDVLCLQETKQEDS---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y+ + + + +A+ ++ + Q D Sbjct: 41 ------KFPYAAFSELGYHAVHIGQKTYNGVAILSRHPILNVQRNIPDFEDDQQR----- 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++ ++ + +DS + Y + L W+ + Sbjct: 90 -----VLAADINGVRMVCAYIPNGQAVDSDKYQYK------MRWLSALNAWLKTELTQHA 138 Query: 204 PFVIAGDFNRKINYLGNNDDFW-------KTIDPNDSLIRF-------PKEKDSRCNANK 249 + GD+N +D ++ + + + Sbjct: 139 KLALLGDYNIAPEDRDCHDPAAWEGQILVSPLEREAFNHLVSLGLSDSFRLFEQPEKSFS 198 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ D + +R SDH P+ + Sbjct: 199 WWDYRMMGFRRNLGMRIDHILVSDALKVLCAAAYI-------DKAPRKLERPSDHTPVVL 251 Query: 301 DYD 303 + + Sbjct: 252 ELN 254 >gi|333031148|ref|ZP_08459209.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM 18011] gi|332741745|gb|EGJ72227.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM 18011] Length = 261 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 95/311 (30%), Gaps = 64/311 (20%) Query: 1 MIR-KYVLALVFFLVPCTASVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 M + K +L+L+ L +R+ +++N+ + + Sbjct: 1 MKKIKIILSLLLVLCSGIVFAQDTIRVRVMTYNLRFG---------------ELASMEEI 45 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTA 113 Q+ K+ + D V LQE+ S + ++ Y T + K + Sbjct: 46 AQHIKSFNPDFVALQEVDSKTYRKRTPHQHGVDFLGELAYHTGMFGIYGKTIDYASGYYG 105 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 I + K + + L ++ R R +E L E+ I HL + Sbjct: 106 IGILSKYSYITTKKTMLPKTEE---RLEQRALLEGLFEVGNDTIVFASTHLDAM------ 156 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 S S Q +K + + S P ++ GDFN + Sbjct: 157 ------SDETRSIQFDKIKKCL---EASQYPVLLGGDFNTRSTSSLIKKM---------- 197 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + DS + + IDY + + + ++ LS Sbjct: 198 -DNWFLGTDSDFGI-PSWKPIAKIDYIF------------GYPQKGWEIISTQTIQSLLS 243 Query: 294 DHCPISIDYDF 304 DH PI + + Sbjct: 244 DHMPIITELIY 254 >gi|149377356|ref|ZP_01895101.1| extracellular nuclease, putative [Marinobacter algicola DG893] gi|149358368|gb|EDM46845.1| extracellular nuclease, putative [Marinobacter algicola DG893] Length = 588 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 83/312 (26%), Gaps = 35/312 (11%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKN------SVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +R+V+ N+ +G S + L D DI+ + EM Sbjct: 282 SATLRVVTLNLGNFFNGDGRGGGFPAARGAQSATQFEQQKARLVASLTIPDPDILAVTEM 341 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + R ++ + ++ I T + R V + L Sbjct: 342 ENDGYEGDSAIAELARALGPHWRYVDTNNNTGSDAIRTDLLYRSDRVVAEGSASRLTTTP 401 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF-----LDSLENTYSPSCSLLSQQA- 188 R A + + + ++ HLKS + ++ S +QA Sbjct: 402 F-DRRGRPPVAQIFRPINSDRALRIVVPHLKSKACRGAKGPNRDQDDGQGCYSHRREQAT 460 Query: 189 QWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-- 244 + + W +I GD N + ++ + Sbjct: 461 RAIIRWTHALPHPNGLAGTMITGDMNAYAREAP-----LQLLEAAGFINTVHHFHGCTDT 515 Query: 245 ---CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------KR 291 + + +DY ++ ++ I +E R Sbjct: 516 SCKHTSYRYHGRSGTLDYSLVSNGLLPQIVGAHTWSINSDEPRALGYKGPVTLPTGQPWR 575 Query: 292 LSDHCPISIDYD 303 SDH P+ D Sbjct: 576 SSDHNPVITDLS 587 >gi|149371411|ref|ZP_01890897.1| extracellular nuclease [unidentified eubacterium SCB49] gi|149355549|gb|EDM44108.1| extracellular nuclease [unidentified eubacterium SCB49] Length = 1580 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 82/328 (25%), Gaps = 44/328 (13%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 V ++ S+N+ ++ + T + ++AD+V L E+ Sbjct: 990 TPPEVGGTFKVASFNVLNYFTTIDSRGADSAAELTRQR-EKIAAAICAMNADVVGLIEIE 1048 Query: 76 SYNAV---AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL-QQSYPLL 131 + V + + + +++I A V V + Sbjct: 1049 NNGTVAINDLLNGTGGINDTCTATYAAVDTGAFGDDEIAMAFIYNTATVTVEGAHAILDS 1108 Query: 132 GAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSC------SL 183 F NR A+ + KI V+ H KS N + Sbjct: 1109 SVDPRFLDTKNRPALAQTFKEIATNAKITVIVNHFKSKGSACDDVNDPDLNDGAGNCNIT 1168 Query: 184 LSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF 237 ++ A L DW+ F+I GD N +D Sbjct: 1169 RTEAAAALVDWLATDPTNSEDPDFLIIGDLNSYKKETPITAIIAGADDTVGTSDDYTDLL 1228 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------- 289 + +DY + N + I +E + Sbjct: 1229 ENFSGDDAYSYVFDGQLGYLDYSLASNNLLSQITGTISWNINADEISVLDYNDGIQDAGE 1288 Query: 290 -----------------KRLSDHCPISI 300 R SDH PI + Sbjct: 1289 SSFERESNALPIYESNMFRASDHDPILV 1316 >gi|172058551|ref|YP_001815011.1| endonuclease/exonuclease/phosphatase [Exiguobacterium sibiricum 255-15] gi|171991072|gb|ACB61994.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sibiricum 255-15] Length = 915 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 33/328 (10%), Positives = 70/328 (21%), Gaps = 58/328 (17%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + ++ + S+N+ + + + K DIV L EM Sbjct: 517 TNIETGDSRLTVASYNVENFASTADAGKVDRVS-------EGIATFLKT--PDIVGLTEM 567 Query: 75 GSYNAVAKV-----------------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + + +I Sbjct: 568 QDNDGATDSGTVDASKSFETLIAAIEAKTGVRYAYTDIAPEDKKDGGQPGGNIRVGFLYN 627 Query: 118 KKNVRVLQ-----------------QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 V + + P + + +R+ + G+ V+ Sbjct: 628 PARVSLAPGVKGTATQAVAVENGKLTNNPGRIQPNDPNFDSSRKPLVGEFIFKGESYHVI 687 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES------LVPFVIAGDFNRK 214 H S + P Q + + V+ GD N Sbjct: 688 VNHFNSKGGDGADFGKNQPVVRKSEVQRHAIAGIVQNFVNELETEVKDSNVVVLGDLNDF 747 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 + ++ S + N +D+ ++ +N + + Sbjct: 748 QFSK-----TLDILKGDNLWNTVEDLPKSERYSYVYNGNAQVLDHVLISKNLKPYTSSDI 802 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302 + D SDH P I Sbjct: 803 VNI----NSDYMEADGSASDHDPAIISI 826 >gi|197123156|ref|YP_002135107.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. K] gi|196173005|gb|ACG73978.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. K] Length = 296 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 86/291 (29%), Gaps = 38/291 (13%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKN------SVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++VR+VSWN++ L + ++ + + + LDAD+V LQ Sbjct: 34 TAGERVRIVSWNVHDLFDDVDRTVPPGALDTVATADEVEAKLARVAAVLARLDADLVLLQ 93 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ + + + + E +AV + S+ Sbjct: 94 EVETAALAGALAARAGYAEARLVEGNDPRG---------IDVAVLSRLPLRAYVSHRDER 144 Query: 133 AKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 S R VE G + ++ HL S D + ++QA L Sbjct: 145 DA-SGRPLFPRDCVEAHAALPGGGTLALVGSHLSSALSDDG---------TRRAEQAARL 194 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 ++ + V GD N + + + Sbjct: 195 REVADGLLRAGAQVVAGGDLNDEAGST----ALAPLLGDGGWIDPAAALPPEARWTWSGG 250 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D+ + + ++Q + + SDH P+ +D Sbjct: 251 GARAALDHLAVPRADAGSVVQAAI--------AGGPDVQAASDHRPVVLDL 293 >gi|21958993|gb|AAM85715.1|AE013819_1 exonuclease III [Yersinia pestis KIM 10] gi|45436631|gb|AAS62185.1| exodeoxyribonuclease III [Yersinia pestis biovar Microtus str. 91001] Length = 271 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 79/311 (25%), Gaps = 73/311 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ VS+NIN L + L + D++ LQE Sbjct: 3 TMKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDD 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 +FP + H +A+ K + + +D+ Sbjct: 44 MFP-------LEDVSQHGYHVFYHGQKGHYGVALLTKEQPLAVRRGFPSDEEDA-----Q 91 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 RR + + + V++ F + ++ L+ ++ ++ Sbjct: 92 RRIIMADLATPQGTLTVIN-----GYFPQGESRDHPIKFPAKARFYADLQRYLEEQLSPE 146 Query: 203 VPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 +I GD N L ++ + + + F Sbjct: 147 AQVLIMGDLNISPTDLDIGIGEDNRKRWLRTGKCSFLPEEREWLERLQNWGLVDTFRAAN 206 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID + Q I D ++ Sbjct: 207 PDCNDHFSWFDYRSRGFDENRGLRIDLLLASQPLAARCIATGI-------DYAIRGMEKP 259 Query: 293 SDHCPISIDYD 303 SDH P+ ++ Sbjct: 260 SDHAPVWSEFS 270 >gi|254805570|ref|YP_003083791.1| exodeoxyribonuclease III [Neisseria meningitidis alpha14] gi|254669112|emb|CBA07713.1| exodeoxyribonuclease III [Neisseria meningitidis alpha14] Length = 256 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 86/305 (28%), Gaps = 73/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + DI+ LQE Sbjct: 1 MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ +N + R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVH-----IGLPALPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V++++ + LDS + Y Q L +++ + Sbjct: 90 RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMARHG 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D +++ + Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWYEKIHCSTVERQWFQNLLDLGLTDSLRHIHPEGAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ L D +R SDH P++ Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDV-------RVDLETRALERPSDHAPVT 251 Query: 300 IDYDF 304 ++D+ Sbjct: 252 AEFDW 256 >gi|110641869|ref|YP_669599.1| exonuclease III [Escherichia coli 536] gi|300987545|ref|ZP_07178252.1| exodeoxyribonuclease III [Escherichia coli MS 200-1] gi|110343461|gb|ABG69698.1| exodeoxyribonuclease III [Escherichia coli 536] gi|300306115|gb|EFJ60635.1| exodeoxyribonuclease III [Escherichia coli MS 200-1] gi|324011528|gb|EGB80747.1| exodeoxyribonuclease III [Escherichia coli MS 60-1] Length = 272 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 83/312 (26%), Gaps = 73/312 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++ VS+NIN L + L + D++ LQE ++ + Sbjct: 2 AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQETKVHDVM 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + ++ H +A+ K + + Sbjct: 46 ----------FPLEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEE 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + + + V++ F + +Q Q L++++ + + Sbjct: 91 AQRRIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELK 145 Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239 P +I GD N L ++ + + + F Sbjct: 146 RENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRH 205 Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + Q + ++ D + Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258 Query: 291 RLSDHCPISIDY 302 + SDH P+ + Sbjct: 259 KPSDHAPVWATF 270 >gi|172062743|ref|YP_001810394.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MC40-6] gi|171995260|gb|ACB66178.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MC40-6] Length = 600 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 42/320 (13%), Positives = 85/320 (26%), Gaps = 48/320 (15%) Query: 19 SVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVF 70 A VR+ S+N+ N + + + R + + L AD++ Sbjct: 286 PQAD-VRVASFNVFNYFNGDGAGGGFGDPSGRGAKTPAAFARQEAKIVAALRALRADVIG 344 Query: 71 LQEMGSY-NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 L E+ + A + + + + R + I A+ + + P Sbjct: 345 LMEIANNGQGPASAVQRLAARLGGGWRAVDPGTPRLGRDAIAVALLYDSRTIE------P 398 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKK--IWVLDIHLKSFCFLDSLENTYSPSC------ 181 + A NR + G V HLKS + S Sbjct: 399 VGRAATVALDGRNRPPLAQTFRRVGGTRAFTVAVNHLKSKNCPHAAGPDLDQSDGQGCWN 458 Query: 182 SLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + ++ A+ + W+ + ++ GD N + ++ + Sbjct: 459 ATRTRAAERVAAWLATSPTGAAADGVLLIGDLNSYAKEDP-----LRALESRGYANLVAR 513 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED---------------- 283 + +D+ + + I +E Sbjct: 514 FAGNAGYTYVFRGEAGNLDHALATPPLAARVKAVHAWHINADEPIALQAVPDYKTPAQQA 573 Query: 284 -DIKSRGKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 574 AYYAPDAYRSSDHDPVVIDL 593 >gi|70731287|ref|YP_261028.1| exonuclease III [Pseudomonas fluorescens Pf-5] gi|68345586|gb|AAY93192.1| exodeoxyribonuclease III [Pseudomonas fluorescens Pf-5] Length = 270 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 80/311 (25%), Gaps = 74/311 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVADE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + H +A+ + + G + A R Sbjct: 41 ------QFPLADIQALGYHVHYHGQKGHYGVALLSRQAPLALHK----GFEGDDEDAQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + NG + +++ F + + Q L+ + + + Sbjct: 91 FIWGTFADANGTPVTIMN-----GYFPQGESRDHPTKFPAKERFYQDLQHLLESRFSNDQ 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 P V+ GD N ++L ++ + + F Sbjct: 146 PLVVMGDVNISPEDCDIGIGAENAKRWLKTGKCSFLPEEREWMARLKNWGLVDSFRHLNP 205 Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + Q + D ++ Sbjct: 206 EVNDRFSWFDYRSRGFEDEPKRGLRIDLIMASQGLLPRVKDAGV-------DYELRGMEK 258 Query: 292 LSDHCPISIDY 302 SDH PI ++ Sbjct: 259 PSDHAPIWLEL 269 >gi|291615489|ref|YP_003522597.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus Nc4] gi|291582551|gb|ADE17007.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus Nc4] Length = 396 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 78/285 (27%), Gaps = 34/285 (11%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 AQ + + SWN L T D++ D V LQE+ S A Sbjct: 17 SAQALTIASWNTKHLG------------WGTKRDWSATAAVVAPY--DFVALQEVMSGAA 62 Query: 80 VAKVFPKNTWCIF--YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 V ++ +S+ R A R++ V + + L D F Sbjct: 63 VKRLVQALEQQTGADWSSLVSETSVGRSKRYQEFYAFIWREEVVDYVGGAVVYLDPGDLF 122 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 + R + + + + + ++Q +W+ + Sbjct: 123 A----REPFAARFQTDNGQYRWTAATVH------VIYGDSRDERRREARQLDDYVNWLEE 172 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 + P ++ GDFN G D + + P AN Sbjct: 173 EVAEGDPVILTGDFNLPPESAGFRD-LARVLKPAIREGASTLSAKEGRYANLY------- 224 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D +A K K +SDH P+ I Sbjct: 225 DNIWYRPDALKIQETRIDRFPQRLGISHNLARKTVSDHAPVVIAL 269 >gi|117623921|ref|YP_852834.1| exonuclease III [Escherichia coli APEC O1] gi|237705700|ref|ZP_04536181.1| exonuclease III [Escherichia sp. 3_2_53FAA] gi|301026483|ref|ZP_07189913.1| exodeoxyribonuclease III [Escherichia coli MS 69-1] gi|91072540|gb|ABE07421.1| exodeoxyribonuclease III [Escherichia coli UTI89] gi|115513045|gb|ABJ01120.1| exodeoxyribonuclease III [Escherichia coli APEC O1] gi|226900457|gb|EEH86716.1| exonuclease III [Escherichia sp. 3_2_53FAA] gi|300395501|gb|EFJ79039.1| exodeoxyribonuclease III [Escherichia coli MS 69-1] gi|315286456|gb|EFU45891.1| exodeoxyribonuclease III [Escherichia coli MS 110-3] gi|315299863|gb|EFU59103.1| exodeoxyribonuclease III [Escherichia coli MS 16-3] Length = 272 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 83/312 (26%), Gaps = 73/312 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++ VS+NIN L + L + D++ LQE Sbjct: 2 AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +FP + ++ H +A+ K + + Sbjct: 43 DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEE 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + + + V++ F + +Q Q L++++ + + Sbjct: 91 AQRRIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELK 145 Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239 P +I GD N L ++ + + + F Sbjct: 146 RENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRH 205 Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + Q + ++ D + Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258 Query: 291 RLSDHCPISIDY 302 + SDH P+ + Sbjct: 259 KPSDHAPVWATF 270 >gi|37680518|ref|NP_935127.1| exonuclease III [Vibrio vulnificus YJ016] gi|37199266|dbj|BAC95098.1| exodeoxyribonuclease III [Vibrio vulnificus YJ016] Length = 268 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 87/310 (28%), Gaps = 72/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKIVSFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K + Q G R Sbjct: 42 -------FPIEDVEAMGYKVYFHGQKAHYGVALLCKQEPIEIQK----GFPTDNDEHQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ G+K+ VL+ F + Q Q L ++T +++ Sbjct: 91 MIIGTFLDEKGEKVTVLN-----GYFPQGDNIAHETKFPYKRQFYQDLMGYLTTHRDNGE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 V+ GD N ++ ++ +T+ F K Sbjct: 146 QVVVMGDINISPIDADIGIGEVNRKRWLKTGKCSFQPEEREWLQTLLDWGLEDTFRKLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 S + + ID + + + + D ++ S Sbjct: 206 SVDDKFSWFDYRSKGFDDNRGLRIDVILATPSLATKCRES-------DIDYELRGIEKPS 258 Query: 294 DHCPISIDYD 303 DH PI ++ Sbjct: 259 DHAPIWATFE 268 >gi|146292722|ref|YP_001183146.1| endonuclease/exonuclease/phosphatase [Shewanella putrefaciens CN-32] gi|145564412|gb|ABP75347.1| Endonuclease/exonuclease/phosphatase [Shewanella putrefaciens CN-32] Length = 944 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 99/333 (29%), Gaps = 50/333 (15%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDAD 67 V T +++ S+N+ +G + + + + AD Sbjct: 450 VAPTLVDGGNLKVASFNVLNYFNGDGQGAGFPTARGANTLSEFERQKAKIVSAMVGISAD 509 Query: 68 IVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKN 120 + L E+ + +A+A + + + I + + I + R+ Sbjct: 510 VFGLMEIENDGFGANSAIADLVAGLNAAVGEARYAYIAPTGINAIGTDAITVGLIYRRDK 569 Query: 121 V-------RVLQQSYPLLGAKDS-FSRAGNRRAVELLVEINGKK--IWVLDIHLKSF--- 167 V + + PL + F+ NR + +NG + + V HLKS Sbjct: 570 VTPKGAARILSSANSPLDDNQQPLFNDTRNRPMLTQAFNVNGSEEGVVVAVNHLKSKGSE 629 Query: 168 CFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 C D N +C+ ++ A + W+ ++ ++ GD N Sbjct: 630 CAGDPDLNDGQGNCNSTRTRAATAVGQWLGEQYPE-QGVLLIGDLNAYAKEDP-----LT 683 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + F + + +D+ + + ++ + I +E + Sbjct: 684 ALANAGFSELFAELRKPNPYTYVFSAESGQLDHALANAELLDKVVDVTQWHINTDEPRVL 743 Query: 287 SRG-----------------KRLSDHCPISIDY 302 R SDH P+ I Sbjct: 744 DYNEEFKTPAQIQDLYSTDAYRSSDHDPVVISL 776 >gi|260777949|ref|ZP_05886842.1| hypothetical protein VIC_003346 [Vibrio coralliilyticus ATCC BAA-450] gi|260605962|gb|EEX32247.1| hypothetical protein VIC_003346 [Vibrio coralliilyticus ATCC BAA-450] Length = 315 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 50/310 (16%), Positives = 103/310 (33%), Gaps = 28/310 (9%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 +++ + N+ E G + + + NL+ADI+ +QE+ S + Sbjct: 5 KRLTFATANLFNFIEPPGAFYDFENIYDADAWEAKCQWTKNAILNLNADIIGVQEVFSLD 64 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG--AKDS 136 A ++F + + ++++ N + A+A + V + P Sbjct: 65 AARQLFEELGY-SYFASVDSPNIESDYIYSHPVVALASKYPISHVEAVTLPASSLAGYSI 123 Query: 137 FSRAGNRRAVELLVEING-KKIWVLDIHLKSFC-------FLDSLENTYSPSCSLLSQQA 188 +R+ V +VE+ ++ V HLKS S +A Sbjct: 124 PQPEFSRQPVFAVVEVPDIGEVAVYVSHLKSQRATEAIEEGEGQPLVGQWLSSQQRGWEA 183 Query: 189 QWLKDWIT-QKKESLVPFVIAGDFNRKINYL-------GNNDDFWKTIDPNDSLIRFPKE 240 L+ + Q + +P V+ GD N+ I+ + + + + + + Sbjct: 184 VMLRLAMEQQYAKHPIPTVLVGDMNQPISSDITGLLTKVIEGESFLMLRDSWDIFVIKQP 243 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD------IKSRGKRLSD 294 R + + +DY + Q Y+ D R K+ SD Sbjct: 244 GAERPPTHYHFAKGNVLDYILFSQEFQPDSQYSMADVTSYSTLDNHLINPSFERDKQASD 303 Query: 295 HCPISIDYDF 304 H +S+ F Sbjct: 304 HAFVSVTVRF 313 >gi|153000336|ref|YP_001366017.1| PKD domain-containing protein [Shewanella baltica OS185] gi|151364954|gb|ABS07954.1| PKD domain containing protein [Shewanella baltica OS185] Length = 944 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 48/333 (14%), Positives = 98/333 (29%), Gaps = 50/333 (15%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDAD 67 + T +++ S+N+ +G + + + + AD Sbjct: 450 IAPTLVEGGNLKVASFNVLNYFNGDGQGAGFPTARGANTLSEFERQKAKIVSAMVGISAD 509 Query: 68 IVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKN 120 + L E+ + +A+A + + I + + I + R Sbjct: 510 VFGLMEIENDGFGANSAIADLVAGLNAAVGEVRYAYIAPTGMNAIGTDAITVGLIYRSDK 569 Query: 121 V-------RVLQQSYPLLGA-KDSFSRAGNRRAVELLVEINGKK--IWVLDIHLKSF--- 167 V + + PL K F + NR + +NG + + V HLKS Sbjct: 570 VTPQGAARILSSANSPLDSDQKPLFDDSKNRPMLTQAFSVNGSEEGVVVAVNHLKSKGSE 629 Query: 168 CFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 C D N +C+ ++ A WI+++ ++ GD N Sbjct: 630 CAGDPDLNDGQGNCNITRTRAATAAGQWISEQYP-DQGILLIGDLNAYAKEDP-----LT 683 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + F K + + +D+ + + ++ + I +E + Sbjct: 684 ALGNAGFSELFAKLEKPNPYSYVFSAESGQLDHALANTALLDKVVDVTEWHINTDEPRVL 743 Query: 287 SRG-----------------KRLSDHCPISIDY 302 R SDH P+ I Sbjct: 744 DYNEEFKTPTQIQDLFATDAYRSSDHDPVVISL 776 >gi|56477773|ref|YP_159362.1| endonuclease / exonuclease / phosphatase family protein [Aromatoleum aromaticum EbN1] gi|56313816|emb|CAI08461.1| predicted endonuclease / exonuclease / phosphatase family protein [Aromatoleum aromaticum EbN1] Length = 250 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 85/287 (29%), Gaps = 48/287 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS----YNA 79 +R+ ++NI+ Q + LR+ + LD D+VFLQE+ + Sbjct: 4 LRVCTYNIHKGFSQFNRRMV----------VHELRERLRTLDVDVVFLQEVQGLHLGHAN 53 Query: 80 VAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + +P + F + + + H AV + V + S Sbjct: 54 LHPNWPGSPQHEFLAEDVWSQFAYGGNAVYDHGHHGNAVLSRYPIVSS-----MNQDVSD 108 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R R + VE+ G V + S +Q L + + Q Sbjct: 109 HRFERRGILHCEVEVPGIGEPVHCVCAHLGLMAGS-----------RRRQMGALAERMEQ 157 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 P +IAGDFN N F + + + + + + Sbjct: 158 VAPGGAPLIIAGDFND-----WRNRAAQLLGRRLGLREAFDRGRGEPARSFPSTVPVLCL 212 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D + F R+SDH ++ + +F Sbjct: 213 DRIYVRG----------FRVRQAQVHCGLP-WSRISDHAALTAELEF 248 >gi|328543967|ref|YP_004304076.1| exodeoxyribonuclease III [polymorphum gilvum SL003B-26A1] gi|326413711|gb|ADZ70774.1| Exodeoxyribonuclease III [Polymorphum gilvum SL003B-26A1] Length = 260 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 39/302 (12%), Positives = 85/302 (28%), Gaps = 67/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + + + + D+ LQE+ S V + Sbjct: 1 MKIATWNING----------------VKARIDTVLAWLQEARPDVACLQEIKS---VDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + ++ +A+ K + D +R Sbjct: 42 FPCQPF-------EDLGYNVATHGQKGFNGVALLSKRPLEDVRRGLPGDDGDEQARY--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E V + + V ++L + L + + Y + L+ + Sbjct: 92 --IEACVSTDRGAVRVGCLYLPNGNPLGTDKFPYKLA------WMDRLRRHAALRLAEEQ 143 Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249 PF++ GD+N + D + N + + Sbjct: 144 PFLLLGDYNVIPEPKDARNPQDWLGDALFQPESRQHFRALVNLGFTEAVRACTDAADTYT 203 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A L D ++ SDH P+ + Sbjct: 204 FWDYQAGAWQKNNGIRIDHVLLSPQAGDLLASCGI-------DKHVRAWEKPSDHVPVWV 256 Query: 301 DY 302 + Sbjct: 257 EL 258 >gi|330953392|gb|EGH53652.1| exonuclease III [Pseudomonas syringae Cit 7] Length = 270 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 34/314 (10%), Positives = 81/314 (25%), Gaps = 78/314 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDEQFPQ 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + H +A+ +N + G + + Sbjct: 45 AEVEALGYHVHFH------------GQKGHYGVALLSRNAPLALHK----GFEGDDEESQ 88 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + NG+ + +++ F + + + L+ + + Sbjct: 89 KRFIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQTLLEGHFSN 143 Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240 P ++ GD N ++L ++ + + + F Sbjct: 144 DQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRHL 203 Query: 241 KDSRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + ID + + + D Sbjct: 204 YPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKEAGV-------DYDLRGM 256 Query: 290 KRLSDHCPISIDYD 303 ++ SDH PI ++ Sbjct: 257 EKPSDHAPIWLELS 270 >gi|330810622|ref|YP_004355084.1| exodeoxyribonuclease III [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378730|gb|AEA70080.1| exodeoxyribonuclease III [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 270 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 36/313 (11%), Positives = 80/313 (25%), Gaps = 76/313 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L + D++ LQE ++ Sbjct: 1 MKIVSFNINGL----------------RARPHQLAALIEKHQPDVIGLQETKVHDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + H +A+ + Q L + R Sbjct: 41 ------QFPLAEVQALGYHVHYHGQKGHYGVALLSR-----QAPLSLYKGFEGDDEDAQR 89 Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + NG + +++ F + + L+ + + + Sbjct: 90 RFIWGTFADANGVPVTIMN-----GYFPQGESRDHPTKFPAKERFYSDLQQLLESRFSND 144 Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241 P V+ GD N ++L ++ + + F Sbjct: 145 QPVVVMGDVNISPEDCDIGIGPDNMKRWLKTGKCSFLPEEREWMARLKNWGLVDSFRHLN 204 Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + + D + Sbjct: 205 PDVTDRFSWFDYRSRGFEDEPKRGLRIDLILTSHGLLPRVKDAGV-------DYELRGME 257 Query: 291 RLSDHCPISIDYD 303 + SDH PI + Sbjct: 258 KPSDHAPIWLQLS 270 >gi|284030291|ref|YP_003380222.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283809584|gb|ADB31423.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 254 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 74/291 (25%), Gaps = 44/291 (15%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 A VR+++WN+ + + + + D+V +QE Sbjct: 2 SATTVRVMTWNLWWRFG-----------PQWVDRQEAILATLRAVGPDVVAVQEAWPEQV 50 Query: 80 --VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +A+ + S + ++ D + + R ++ P + Sbjct: 51 ETLAEQLGMHCRYAGPSYPPETDIARGDDPVSLGMGLLSRWPIADWKVRTMP------AR 104 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-T 196 R AV ++ + V+ L+ Q + L + Sbjct: 105 HRQLEPVAVVASLDHPQVTLHVVTSCLEYEPAFTDD----------RIAQTRLLAELATD 154 Query: 197 QKKESLVPFVIAGDFNRKINYL---GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 + P ++AGD N D + I P E Sbjct: 155 PAYDGDAPVIVAGDLNAGPTSRVLGPLYDVLRDAWTGDPDAITSPDEAGPDLR------- 207 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ + + G SDH + D + Sbjct: 208 DQRIDHIFYRPGTF----SQEVEVTQAQLAGDPVDGITPSDHQAVVCDLRW 254 >gi|186475729|ref|YP_001857199.1| endonuclease/exonuclease/phosphatase [Burkholderia phymatum STM815] gi|184192188|gb|ACC70153.1| Endonuclease/exonuclease/phosphatase [Burkholderia phymatum STM815] Length = 287 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 87/307 (28%), Gaps = 49/307 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 +RL+SWN+ + S+ RT + L + D++ +QE+ Sbjct: 1 MRLISWNVQW----GRSAHGDVSLSRTIDEARRLADF------DVLCMQEVTRGFSVLAG 50 Query: 75 ----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 + +A + P T + + A+ + + L Sbjct: 51 HPGDDQFAELADLLPGYTVLGAIGADLAPLKLDAPAAPRRQFGNALVTRLPVERVIRHSL 110 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD-----SLENTYSPSCSLLS 185 D + + R A+E +++ G + V+ HL+ + + + Sbjct: 111 PWPADPDAPSMQRVALEAVLQAPGGAVRVIVTHLEFYSLKQRLAQVERLREMQQEAAAHA 170 Query: 186 QQAQWLKDWITQKKESLVPF--VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 ++ I ++ P ++ GDFN L + Sbjct: 171 ANPAPAENAIGPFADTARPVSAIVCGDFNSAYGSDAYRRMLEPLAGSPSFLDAWTVLHPG 230 Query: 244 RCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + D+ + ++ L G R SDH Sbjct: 231 QTPPMTAGIYDKAQWSDGPLTCDFVFVTEDLQARLQSCEI-----------DGGTRASDH 279 Query: 296 CPISIDY 302 P+ ++ Sbjct: 280 QPVIVEI 286 >gi|254500814|ref|ZP_05112965.1| exodeoxyribonuclease III [Labrenzia alexandrii DFL-11] gi|222436885|gb|EEE43564.1| exodeoxyribonuclease III [Labrenzia alexandrii DFL-11] Length = 260 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 36/302 (11%), Positives = 83/302 (27%), Gaps = 67/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + ++++ K D+ QE+ S + Sbjct: 1 MKIATWNING----------------VKARLETVQEWLKEASPDVACFQEIKSVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ +A+ K + D +R Sbjct: 41 ------NFPRQPFEDLGYNVETHGQKGFNGVAILSKTPLEDVERRLPGNDDDEQARY--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E V + ++L + L + + Y L ++ V Sbjct: 92 --IEATVTHGDGVVRFGCLYLPNGNPLGTEKFPYK------LGWMDRLLVHAEKRLAEEV 143 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF++ GD+N + + + ++ + ++ Sbjct: 144 PFILLGDYNVIPDPVDAKNPENWTDDALFQPESRQKFRALTHLGMTEAIRACTEAPETFT 203 Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 N I ID+ +M A ++ D ++ SDH P+ + Sbjct: 204 FWDYQAGAWQKNNGIRIDHILMSPQANDKMLGCGI-------DKHVRGWEKPSDHVPVWV 256 Query: 301 DY 302 Sbjct: 257 TL 258 >gi|68248592|ref|YP_247704.1| exonuclease III [Haemophilus influenzae 86-028NP] gi|68056791|gb|AAX87044.1| exodeoxyribonuclease III [Haemophilus influenzae 86-028NP] Length = 267 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 87/311 (27%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + D++ LQE + Sbjct: 1 MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEAFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + +F+ H +A+ K + + +D+ R Sbjct: 45 EITENLGYHVFHH------------GQKGHYGVALLTKQEPKVIRRGFPTDNEDAQKR-- 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +E + V++ F + + L+ ++ ++ + Sbjct: 91 ---IIMADLETEFGLLTVIN-----GYFPQGESRAHETKFPAKEKFYADLQQYLEKEHDR 142 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 P +I GD N + L +++ + F K Sbjct: 143 SNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEERAWYQRLYDYGLEDSFRKL 202 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + ID+ ++ Q + + ++ Sbjct: 203 NPTANDKFSWFDYRSKGFDDNRGLRIDHILISQKLAERCVDVGI-------ALDIRAMEK 255 Query: 292 LSDHCPISIDY 302 SDH PI ++ Sbjct: 256 PSDHAPIWAEF 266 >gi|256838624|ref|ZP_05544134.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256739543|gb|EEU52867.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 280 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 92/316 (29%), Gaps = 49/316 (15%) Query: 2 IRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 +R ++ + C Q+ + + S+N+ +E + W + Sbjct: 1 MRNLIIVFISLFTFCIGISGQQKCKLNVGSFNLRYDNEGDKDDSWVHRKDMA-------V 53 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 D D+ +QE + V + +T+ + H A+ +K Sbjct: 54 SLVHFHDFDVFGIQEGLIHQ-VKDLVKDDTYTFVGVGRDDGKEAGE------HAAVLFKK 106 Query: 119 KNVRVLQQSYPLLG-----AKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLD 171 ++L L + R ++ ++GK+ + +H F Sbjct: 107 DRFKLLDSGNYWLSETQDKPSFGWDAQCRRVCSWAKLKDKVSGKEFYFFSVH-----FDH 161 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--TID 229 + S ++ + + P + GDFN + +D Sbjct: 162 IGKVARHESALIMLANIKKIA--------GDSPAICVGDFNGTPDSEPIQILKSDGLLLD 213 Query: 230 PNDSLIRFPKEKDSRCNANK-NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + P N N K IDY + +N Y + Sbjct: 214 SREISKTPPYGTVGTTNQFNLNAPMKNRIDYIFVTKN---------IHVNKYGTLNEFQY 264 Query: 289 GKRLSDHCPISIDYDF 304 G SDH PI I+ +F Sbjct: 265 GHYPSDHFPIMIEAEF 280 >gi|254418698|ref|ZP_05032422.1| endonuclease/exonuclease/phosphatase family [Brevundimonas sp. BAL3] gi|196184875|gb|EDX79851.1| endonuclease/exonuclease/phosphatase family [Brevundimonas sp. BAL3] Length = 298 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 35/292 (11%), Positives = 78/292 (26%), Gaps = 33/292 (11%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + A + VRL+S+NI + + + + D D++ +QE Sbjct: 30 LTAPADAPRSVRLMSYNIRYDAPDD--------TPNWLQRRPHMARQIAFFDPDVLGVQE 81 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + + + A + P + Sbjct: 82 ALIPMVAYLADQAPAYDHYGVGRDDGAQAGETTTLFWRRARFEAVSTQTLWCSPTPDRPS 141 Query: 134 KDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 K + A R +++ +G+ + V + H+ + + A Sbjct: 142 K-GWDAALPRTVTRVVLRDRASGRLLDVRNAHMDHVG-----------AVAREQCAALAA 189 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN--K 249 + + V+ GDFN + + ++ N Sbjct: 190 DLAPATVEGATAAVVLMGDFNAGPDTAPYRRVLAAGLRDARAVSPVVFGPAGTYNDFDIA 249 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + + ID+ + Y G+ +SDH P+ +D Sbjct: 250 RDNDGVAIDHVFVAPGLS---------VERYGVPTDSFSGQVISDHFPVVVD 292 >gi|300022777|ref|YP_003755388.1| exodeoxyribonuclease III [Hyphomicrobium denitrificans ATCC 51888] gi|299524598|gb|ADJ23067.1| exodeoxyribonuclease III [Hyphomicrobium denitrificans ATCC 51888] Length = 260 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 89/301 (29%), Gaps = 69/301 (22%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L +WNIN + Y + D++ QE+ S + Sbjct: 3 LATWNING----------------VKARLESALTYLRQQSPDVICFQEIKSVDD------ 40 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 S + I ++ + +A+ K+ D +R Sbjct: 41 ----GFPTSAFQDIGYNVATNGQKGFNGVAILSKSPLEDVVRGLPGDDADQHARW----- 91 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 +E V + + + V+ ++L + + + + +Y + ++ Q ++ +P Sbjct: 92 IEASVPLGDRMVRVVSLYLPNGNPIGTEKFSYKLA------WMARMRLRAKQLQQDEMPL 145 Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 V+AGDFN + W+T+ N+ + Sbjct: 146 VLAGDFNVIPESVDAKRPAAWVNDALFQPESRAAWRTLV-NEGFTDATRACHPGPGVYTF 204 Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + ID+ ++ A L+ D ++ SDH P+ + Sbjct: 205 WDYQAGAFQKDDGIRIDHILLSSQAADLLVASGI-------DRATRAQEKPSDHVPVWVK 257 Query: 302 Y 302 Sbjct: 258 L 258 >gi|126665590|ref|ZP_01736572.1| Endonuclease/exonuclease/phosphatase [Marinobacter sp. ELB17] gi|126630218|gb|EBA00834.1| Endonuclease/exonuclease/phosphatase [Marinobacter sp. ELB17] Length = 536 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 88/306 (28%), Gaps = 27/306 (8%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNS------VKRTTSDYTLLRQYAKNLDADIVFLQ 72 + +R+++ N+N L +G + + L AD++ L Sbjct: 234 PTSANLRVMTLNLNNLFNGDGRGQGFPTSRGAKTQAQYKRQLQRLSAGLNQAGADLLALS 293 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNVRVLQQSYPLL 131 E+ + + R + + I + R V L L Sbjct: 294 ELENDGYGSNSAIAQLAASLGPHWRFVVPVDSAMQKDAIRNGLLYRADRVNAL-GPAQYL 352 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC------SLLS 185 R A+ + G + ++ +HLKS ++ + + Sbjct: 353 SGGGGRPSLTQRFAL----KSGGPSLRLVSVHLKSKSCRNARGENAQQNDGQGCYTVVRV 408 Query: 186 QQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 +QA+ L + Q +S +I GDFN ++ + Sbjct: 409 KQAKTLHQQLGQLDKSNALAGTLITGDFNSYSKEQPISELARAGYTNMVAHFHPCTPVLC 468 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------KRLSDHC 296 + + + +D+ + ++ I ++ I R SDH Sbjct: 469 EHYSYRFKGARGSLDHALASAALKPRVLSAKVWNINADQPRIADYRSHSSPQPWRSSDHN 528 Query: 297 PISIDY 302 P+ D Sbjct: 529 PLITDI 534 >gi|300938914|ref|ZP_07153616.1| exodeoxyribonuclease III [Escherichia coli MS 21-1] gi|300456174|gb|EFK19667.1| exodeoxyribonuclease III [Escherichia coli MS 21-1] Length = 272 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 83/312 (26%), Gaps = 73/312 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++ VS+NIN L + L + D++ LQE Sbjct: 2 AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +FP + ++ H +A+ K + + Sbjct: 43 DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEE 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + + + V++ F + +Q Q L++++ + + Sbjct: 91 AQRRIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELK 145 Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239 P +I GD N L ++ + + + F Sbjct: 146 RENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRH 205 Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + Q + ++ D + Sbjct: 206 ANPQTADRFSWFDYRSKVFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258 Query: 291 RLSDHCPISIDY 302 + SDH P+ + Sbjct: 259 KPSDHAPVWATF 270 >gi|83745850|ref|ZP_00942907.1| Exodeoxyribonuclease III [Ralstonia solanacearum UW551] gi|83727540|gb|EAP74661.1| Exodeoxyribonuclease III [Ralstonia solanacearum UW551] Length = 318 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 97/304 (31%), Gaps = 61/304 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+ +WN+N+L + + + +D T + D++ LQE+ + Sbjct: 49 PMRVATWNVNSL--KVRLPHVLQWLGEREADATPI---------DLLCLQELKLPDDRYP 97 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + ++ + + +A+ + + + ++ F+ Sbjct: 98 LAELDA----------AGYASLFTGQKTYNGVAILARKA-AMPEGRDVIKNIPGFADEQQ 146 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R V ++ G + V+ + + LDS + Y + L+DW+ + ++ Sbjct: 147 R-IVAATYDVAGGPVRVISAYFPNGQALDSDKMVYK------MRWLAALQDWLKTEMDAH 199 Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GDFN + ++ ++ + F + + Sbjct: 200 PRLMLLGDFNIAPDDRDVHDPKKWEGMNLVSPEERAAFRALESAGLVDAFRMFEQAD-KL 258 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + ID+ ++ + D + ++ SDH P+ Sbjct: 259 FSWWDYRLFAFKRNAGLRIDHILLSPELAQRCESCHI-------DRVPRGWEQPSDHTPV 311 Query: 299 SIDY 302 Sbjct: 312 VAAL 315 >gi|187940074|gb|ACD39207.1| hypothetical protein PACL_0419 [Pseudomonas aeruginosa] Length = 368 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 39/300 (13%), Positives = 90/300 (30%), Gaps = 42/300 (14%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 L+ ++ + S A + L+SWN L + + L + A AD Sbjct: 9 LLLGTVLVSSLSSAADLTLMSWNAMRLG------------QGGEKSFPALAEVAGK--AD 54 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 +V +QE+ + + K+ + L++H+ + A +R+ V + Sbjct: 55 LVAIQEVMNEEGLTKLEAELEKRTGEQWSTLVSHAVGSRSYKELYAFLMRESVVVYEDGA 114 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 + D R + + +G V IH+ Sbjct: 115 VVYMDRGD----RFIREPLSARFKSKRDGTLFAVASIHVLYGKGPQD-----------RE 159 Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + + L+ + + P ++ GDFN ++ + + + + + Sbjct: 160 PEVRELESYWAWLESIYPETPVMLVGDFNMPPSHP-----AFSGLSQHATPLITKGATTL 214 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISIDY 302 D + + L + + ++ +SDH P+ + Sbjct: 215 SAREGLYAN---LYDNIWVSRTHRLKLDNAGIMDYPRMIGWSHEKSRKHVSDHAPVFVTL 271 >gi|288549534|ref|ZP_05967343.2| exodeoxyribonuclease III [Enterobacter cancerogenus ATCC 35316] gi|288318297|gb|EFC57235.1| exodeoxyribonuclease III [Enterobacter cancerogenus ATCC 35316] Length = 354 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 84/314 (26%), Gaps = 73/314 (23%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 ++A ++ VS+NIN L + L + D++ LQE Sbjct: 82 ALAATMKFVSFNINGL----------------RARPHQLEAIVEQHQPDVIGLQE---TK 122 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 +FP + ++ H +A+ K V + Sbjct: 123 VHDDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPVSVRR-----GFPGDD 170 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 RR + + I V++ F + ++ Q L+D++T + Sbjct: 171 GEAQRRIIMAEIPSPLGNITVIN-----GYFPQGESRDHPTKFPAKAKFYQDLQDYLTAE 225 Query: 199 KESLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRF 237 P +I GD N L ++ + + + F Sbjct: 226 LNKENPVLIMGDVNISPTDLDIGIGEESRKRWLRTGKCSFLPEEREWMERLIGWGLVDTF 285 Query: 238 PKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + ID + + I+ D Sbjct: 286 RAANPDTQDRFSWFDYRSKGFDDNRGLRIDLLLASAPLAERCIETGI-------DYDIRG 338 Query: 289 GKRLSDHCPISIDY 302 ++ SDH P+ + Sbjct: 339 MEKPSDHAPVWAKF 352 >gi|300994386|ref|ZP_07180891.1| exodeoxyribonuclease III [Escherichia coli MS 45-1] gi|300406232|gb|EFJ89770.1| exodeoxyribonuclease III [Escherichia coli MS 45-1] gi|315290452|gb|EFU49827.1| exodeoxyribonuclease III [Escherichia coli MS 153-1] Length = 272 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 83/312 (26%), Gaps = 73/312 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++ VS+NIN L + L + D++ LQE Sbjct: 2 AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +FP + ++ H +A+ K + + Sbjct: 43 DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEE 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + + + V++ F + S +Q Q L +++ + + Sbjct: 91 AQRRIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFSAKAQFYQNLHNYLETELK 145 Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239 P +I GD N L ++ + + + F Sbjct: 146 RENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRH 205 Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + Q + ++ D + Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258 Query: 291 RLSDHCPISIDY 302 + SDH P+ + Sbjct: 259 KPSDHAPVWATF 270 >gi|78063607|ref|YP_373515.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. 383] gi|77971492|gb|ABB12871.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. 383] Length = 604 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 45/316 (14%), Positives = 95/316 (30%), Gaps = 48/316 (15%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ N + + + R ++ + K +DAD++ L E+ Sbjct: 293 LRVASFNVLNYFNGNGLGGGFDDPNNRGAKNFQEFQRQEAKIVSALKAIDADVIGLMEIQ 352 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + R+++ R + I A+ + V P+ A Sbjct: 353 NNGYGELSAVRQLAAKLGNNWRVVDPGVSRLGGDAITVAMIYDSRKVE------PVGRAA 406 Query: 135 DSFSRAGNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLS 185 NR+ + + N + + V HLKS D+ + + Sbjct: 407 TLAIDDKNRQPLAQSFRLIAGNKQSLTVAVNHLKSKNCPDAANDDLDQGDGQGCWNPTRT 466 Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + A + DW+ + ++ GDFN +T++ + + Sbjct: 467 RAAAKVADWLAGNPTGVAGQGVLLIGDFNSYTYEDPI-----RTLETRGYRNLVARWIGA 521 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--------------- 288 + +D+ + + I +E Sbjct: 522 NAYSYVYNGEAGYLDHALATLPLASHVKAVHEWHINADEPLALQYTLAYKSAEQQKTFYA 581 Query: 289 --GKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 582 PDAYRSSDHDPVLIDI 597 >gi|294827778|ref|NP_711210.2| sphingomyelinase C precursor [Leptospira interrogans serovar Lai str. 56601] gi|293385623|gb|AAN48228.2| sphingomyelinase C precursor [Leptospira interrogans serovar Lai str. 56601] Length = 607 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 42/293 (14%), Positives = 95/293 (32%), Gaps = 25/293 (8%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++++S N+ L + W N + Y K + D++ +E +A Sbjct: 138 EIKVLSHNVFMLPTN--LPRWGNLGHDERAKRISKSDYVK--NQDVIVFEEAFDTSARKI 193 Query: 83 VFPKNTWCIFYST--------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + Y T + S + ++ + + K + Y + Sbjct: 194 LLDNLREEYPYQTDVVGRTKKNWDASLGNFRSYSLVNGGVVILSKWPIEEKIQYIFNDSG 253 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 N+ V + + GKK V+ H +S +N + + Q ++++ Sbjct: 254 CGADWFANKGFVYVKINKEGKKFHVIGTHAQS-----QDQNCSNLGIPNRANQFDDIRNF 308 Query: 195 I-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN----ANK 249 I ++ +I GD N D + + P D++ N Sbjct: 309 IYSKNIPKDETVLIVGDLNVIKESNEYYDMISRLNVNEPRYVGVPFTWDAKTNEIAAYYY 368 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---LSDHCPIS 299 + +DY + ++ + + ++ + ++ G SDH PI Sbjct: 369 ENEEPVYLDYIFVSKSHAQPPVWQNLAYDPVSKQTWTVSGYTSDEFSDHYPIY 421 >gi|217973633|ref|YP_002358384.1| PKD domain-containing protein [Shewanella baltica OS223] gi|217498768|gb|ACK46961.1| PKD domain containing protein [Shewanella baltica OS223] Length = 944 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 49/333 (14%), Positives = 101/333 (30%), Gaps = 50/333 (15%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDAD 67 V T + +++ S+N+ +G + + + + AD Sbjct: 450 VAPTLNDGGNLKVASFNVLNYFNGDGQGAGFPTARGANTLSEFDRQKAKIVSAMVGISAD 509 Query: 68 IVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKN 120 + L E+ + +A+A + + + I + + I + R+ Sbjct: 510 VFGLMEIENDGFGANSAIADLVAGLNAAVGEARYAYIAPTGMNAIGTDAITVGLIYRRDK 569 Query: 121 V-------RVLQQSYPLLGA-KDSFSRAGNRRAVELLVEINGKK--IWVLDIHLKSF--- 167 V + + PL K F + NR + +NG + + V HLKS Sbjct: 570 VTPQGAARILSSANSPLDSDQKPLFDDSKNRPMLTQAFSVNGSEEGVVVAVNHLKSKGSE 629 Query: 168 CFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 C D N +C+ ++ A WI+++ ++ GD N Sbjct: 630 CAGDPDLNDGQGNCNITRTRAATAAGQWISEQYP-DQGVLLIGDLNAYAKEDP-----LT 683 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + F K + + +D+ + + ++ + I +E + Sbjct: 684 ALGNAGFSELFAKLEKPNPYSYVFSAESGQLDHALANAALLDKVVDVTEWHINTDEPRVL 743 Query: 287 SRG-----------------KRLSDHCPISIDY 302 R SDH P+ I Sbjct: 744 DYNEEFKTPAQIQDLFATDAYRSSDHDPVVISL 776 >gi|294651509|ref|ZP_06728821.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|292822597|gb|EFF81488.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 459 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 52/295 (17%), Positives = 97/295 (32%), Gaps = 38/295 (12%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIVFLQEMGSYNA 79 A +++++S+NI L L + ++L+ D++ +QE S + Sbjct: 190 ADEIKVLSYNIYALPMVASKIS------------ERLAELPQHLNGYDVILMQEAFSSSR 237 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + + + + + D + R V+ + YP D F+ Sbjct: 238 TGMLNQLAQQYPYQTHVPIGS---GYNLFDSGVLVLSRYPIVKTAEMIYPDCTGTDCFAD 294 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK- 198 + + NGK V H SF + + +L Q Q ++ I Q+ Sbjct: 295 K---GVIYAEIIKNGKAYHVTSTHTASF--------DTNEARALRQVQFQQIRQLINQQN 343 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL------- 251 S ++ GDFN L D + N + S + N Sbjct: 344 IPSFDAVLMGGDFNVN-KLLWPQDYQDMLTNLNATAPVSTGYTASTFDPRINKLAGAAGS 402 Query: 252 --RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +DY V N + + IL + D LSDH P+ +++ Sbjct: 403 GGTTVEYLDYVVSSNNHRQPTQSRNDVRILRSAADPLFMTWDLSDHFPVMGHFNY 457 >gi|220917964|ref|YP_002493268.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans 2CP-1] gi|219955818|gb|ACL66202.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans 2CP-1] Length = 261 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 80/285 (28%), Gaps = 55/285 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 R+V+WN++ L D + + ++ AD+ LQE+G+ Sbjct: 3 FRVVTWNVHGLRGAGRRP-----------DPERIARVLDDIGADVAGLQEVGAR------ 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIH-----TAIAVRKKNVRVLQQSYPLLGAKDSFS 138 P + RL + H A+ ++ ++Y L Sbjct: 46 LPGADAHAAEALARLTGLNGAFGPTLQHARGFAYGNAILSRHPIDATRTYDLSVPGR--- 102 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R + +++ ++ V HL Q A L I + Sbjct: 103 --EPRGCLRADLDLGPMRVHVFAAHLGLHWR------------ERRRQAAALLSADILRD 148 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 P V+ GDFN + +T+ P + +D Sbjct: 149 AALSHPLVLVGDFNSPSDRSAVPRWLRRTLTDCAVAAGRPAATFPSAWP------LLRLD 202 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D E +R SDH P+ ++ + Sbjct: 203 RAYVDAALRVL----------ACEVIRTPLARRASDHLPLVVELE 237 >gi|300823193|ref|ZP_07103326.1| exodeoxyribonuclease III [Escherichia coli MS 119-7] gi|331677629|ref|ZP_08378304.1| exodeoxyribonuclease III [Escherichia coli H591] gi|300524347|gb|EFK45416.1| exodeoxyribonuclease III [Escherichia coli MS 119-7] gi|331074089|gb|EGI45409.1| exodeoxyribonuclease III [Escherichia coli H591] Length = 272 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 82/312 (26%), Gaps = 73/312 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++ VS+NIN L + L + D++ LQE Sbjct: 2 AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +FP + ++ H +A+ K + + Sbjct: 43 DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEE 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + + + V++ F + +Q Q L++++ + + Sbjct: 91 AQRRIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELK 145 Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239 P +I GD N L ++ + + F Sbjct: 146 RDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRH 205 Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + Q + ++ D + Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258 Query: 291 RLSDHCPISIDY 302 + SDH P+ + Sbjct: 259 KPSDHAPVWATF 270 >gi|332374334|gb|AEE62308.1| unknown [Dendroctonus ponderosae] Length = 410 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 91/299 (30%), Gaps = 24/299 (8%) Query: 18 ASVAQKVRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +RL WNI L E + + L+ + D++ LQE+ Sbjct: 104 TTSPHSLRLFQWNILSQALGKENDNFARCPEEALDWNHRKYLIVEEIIEYCPDVICLQEV 163 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 ++ + V + + + +N AI R +L+ +L Sbjct: 164 DHFHFLKHVLETQGYTGMFFPKPDSPCFYIDGNNGPDGCAIFFRTDKFELLRAETRILEI 223 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 S + L V+ G++I V+ HLK+ + +L ++Q + L + Sbjct: 224 WRIQSN-QVALLMILKVKQTGQEICVVTTHLKA--------RRSALLATLRNEQGKDLLE 274 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN----ANK 249 ++ Q P +++GDFN + + + Sbjct: 275 FVRQNCG-DRPTILSGDFNAEPAEPIYGTVLGSGQHLASAYAECAGNGWIPSDKREPPYT 333 Query: 250 NLRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + IDY +N D + SDH + D+ Sbjct: 334 TWKIRDEGEVCHTIDYIFYSKNKLDVDGVLELPTEKDIGPDRVPSLRYPSDHFSLICDF 392 >gi|159030909|emb|CAO88590.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 1562 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 41/333 (12%), Positives = 85/333 (25%), Gaps = 51/333 (15%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT----TSDYTLLRQYAKNLDADIVFL 71 +V ++++ S+N+ + L LDAD+ L Sbjct: 474 TPTNVGGRLKIASYNVLNYFTTVANGTNNARGANSINEFQRQEEKLVTALIGLDADVFGL 533 Query: 72 QEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK-KNVRVLQQSY 128 E+ + A++K+ + + + + I + R K V Sbjct: 534 IELENNGDGAISKLVNALN-AVAGAGTYAFIPTGTIGTDAIKVGLIYRPAKVTPVGDFKI 592 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP--------- 179 F NR A+ + + S S Sbjct: 593 LDSSVDPRFDDTRNRPALAQAFQEVNTAAKFNLVVNHLKSKGQSGLTNTSDPNFDRGDGQ 652 Query: 180 --SCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 + + A L+DWI + ++I GD N + ++ Sbjct: 653 GFWNASRTNAALALRDWIATDPTNSGDRDYLIIGDLNAYAQEDPI-----RALESAGYTN 707 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289 + + +D+ + + + + + I +E ++ Sbjct: 708 LVSQFGGIDAYSFVFDGQAGYLDHALANASLASQVTGVAEWHINADEPNVFDYNDDIIDP 767 Query: 290 -------------------KRLSDHCPISIDYD 303 R SDH P+ I D Sbjct: 768 GENPSNPPLNPSALYQVNPYRTSDHDPVLIGLD 800 >gi|320155825|ref|YP_004188204.1| exodeoxyribonuclease III [Vibrio vulnificus MO6-24/O] gi|319931137|gb|ADV86001.1| exodeoxyribonuclease III [Vibrio vulnificus MO6-24/O] Length = 268 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 87/310 (28%), Gaps = 72/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKIVSFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K + Q G R Sbjct: 42 -------FPVEDVEAMGYKVYLHGQKAHYGVALLCKQEPIEIQK----GFPTDNDEHQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ G+K+ VL+ F + Q + L ++T +++ Sbjct: 91 MIIGTFLDEKGEKVTVLN-----GYFPQGDNIAHETKFPYKRQFYKDLMGYLTTHRDNGE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 V+ GD N ++ ++ +T+ F K Sbjct: 146 QVVVMGDINISPIDADIGIGEVNRKRWLKTGKCSFQPEEREWLQTLLDWGLEDTFRKLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 S + + ID + + + + D ++ S Sbjct: 206 SVDDKFSWFDYRSKGFDDNRGLRIDVILATPSLAAKCRES-------DIDYELRGIEKPS 258 Query: 294 DHCPISIDYD 303 DH PI ++ Sbjct: 259 DHAPIWATFE 268 >gi|238020687|ref|ZP_04601113.1| hypothetical protein GCWU000324_00577 [Kingella oralis ATCC 51147] gi|237867667|gb|EEP68673.1| hypothetical protein GCWU000324_00577 [Kingella oralis ATCC 51147] Length = 255 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 84/302 (27%), Gaps = 73/302 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + DI+ LQE+ Sbjct: 1 MKIATWNVNSLN----------------VRLPQVSDWLAAHQPDILVLQELKLEQD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + R++ + + +A+ ++ Q+ D R Sbjct: 41 ------KYPAAAFRMMGWHTAWAGQKTYNGVAIISRHPLQDVQTGLPALPDDPQQR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + I V++++ + LDS + Y Q L +++ + Sbjct: 91 -VIAATIN----DIRVINVYCVNGEALDSPKFAYKR------QWFAALTEYVRDQLAQHP 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D ++ + + + Sbjct: 140 KLVLLGDFNIAPADDDVYDPQRWHEKILCSGEERQWFANLLNLGLHDALRHIYPTGAH-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ L + D +R SDH P+ Sbjct: 199 TWWDYRGAMFAKGLGLRIDHLLISPALRDSLRSVNI-------DSEARAQERPSDHAPVV 251 Query: 300 ID 301 + Sbjct: 252 AE 253 >gi|148242745|ref|YP_001227902.1| exodeoxyribonuclease III [Synechococcus sp. RCC307] gi|147851055|emb|CAK28549.1| Exodeoxyribonuclease III [Synechococcus sp. RCC307] Length = 275 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 96/305 (31%), Gaps = 69/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N S + L ++ + D++ LQE +A Sbjct: 1 MRIATWNVN----------------SIRSRQSHLLRWLEQAKPDVLGLQETKVEDA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ---SYPLLGAKDSFSRA 140 + + S + +A+ + + L G + + + Sbjct: 41 ------QFPAAAMEEAGYRTVISGQKSYNGVALLSREPLEEVRIGFDALLPGDEAAIELS 94 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +R + V+ + VL++++ + + S + Y + L+ ++ ++E Sbjct: 95 QQKRVISAWVD----GVRVLNLYVPNGSEVGSEKYAYKLA------WLDCLRRYLDVQRE 144 Query: 201 SLVPFVIAGDFNRKINYLGNN------------DDFWKTIDP--NDSLIRFPKEKDSRCN 246 PF + GDFN + D + + D L + + Sbjct: 145 QGEPFCMLGDFNIGPEARDLHNPERSTGGIMASDAEREALKACLGDDLRDAFRMFEQGSG 204 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ +D+ + + + ++ SDH P Sbjct: 205 HWSWWDYRSGAWNGDRGWRIDHLYLDEELQQRALACEIH-------KSERGLEKPSDHAP 257 Query: 298 ISIDY 302 +S+D Sbjct: 258 VSVDL 262 >gi|330508676|ref|YP_004385104.1| extracellular nuclease [Methanosaeta concilii GP-6] gi|328929484|gb|AEB69286.1| extracellular nuclease, putative [Methanosaeta concilii GP-6] Length = 596 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 43/325 (13%), Positives = 95/325 (29%), Gaps = 45/325 (13%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD------YTLLRQYAKNLDADIV 69 V ++R+ S N+ G S + S+ + Q ++ AD++ Sbjct: 278 NPEPVGGRLRIASLNLENYFNGNGAGRGFPSARGARSNGEFELQRAKIIQAITDMKADVI 337 Query: 70 FLQEMGSY-----NAVAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 L E+ + +A+ + + + S + ++ I + + Sbjct: 338 GLIEIENDGYGNLSAIHDLCDGLNAREDGIGLENYSFVDPGSPKLGDDLISVGLIYNRTT 397 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK----KIWVLDIHLKSFCFLDSLENT 176 +R + ++ S R+ + E + V+ + K+ D + N Sbjct: 398 IRPIGKAATTSMGAFSSGN---RQPLAQTFEEISTLERLTVVVVHLKSKNPPGGDEVANG 454 Query: 177 YSPSCSL--------LSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWK 226 + C ++ A L DW++ ++I GD N N Sbjct: 455 DNRDCGDGQGYWNGDRTRAANELIDWLSSDPTGSHDPDYLILGDMNSYRNEDPI-----M 509 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL------- 279 + + + S + +D+ + + + S I Sbjct: 510 ALKRAGYVNQISSLLASNSYSYVFQGRWGELDHILASPSLTGQVTGASIWHINSDESPDF 569 Query: 280 -YNEDDIKSRGKRLSDHCPISIDYD 303 Y+ R SDH P+ Sbjct: 570 GYSGIWSSPDKYRCSDHDPLIAGIS 594 >gi|206562314|ref|YP_002233077.1| putative extracellular endonuclease/exonuclease/phosphatase family protein [Burkholderia cenocepacia J2315] gi|198038354|emb|CAR54309.1| putative extracellular endonuclease/exonuclease/phosphatase family protein [Burkholderia cenocepacia J2315] Length = 604 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 42/316 (13%), Positives = 87/316 (27%), Gaps = 48/316 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRT--------TSDYTLLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ G+ + + K +DAD++ L E+ Sbjct: 293 LRVASFNVLNYFNGNGLGGGFDDPNNRGAKTFQEFQRQEAKIVSALKAIDADVIGLMEIQ 352 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + + R + I A+ + V P+ A Sbjct: 353 NNGYGELSAVRQLAAKLGNHWRVVDPGTSRLGGDAIAVALIYDSRKVE------PVGRAA 406 Query: 135 DSFSRAGNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLS 185 NR+ + + N + + V HLKS D+ + + Sbjct: 407 TLAIDDKNRQPLAQSFRLVNGNKQALTVAVNHLKSKNCPDAANDDLDQGDGQGCWNPTRT 466 Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + A + DW+ ++ GDFN + ++ + + Sbjct: 467 RAAAKVADWLAGNPTGVKSQGVLLIGDFNSYTYEDPI-----RALESRGYRNLVARWIGA 521 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--------------- 288 + +D+ + + I +E Sbjct: 522 NAYSYVYNGEAGYLDHALATLPLASHVKAVHEWHINADEPLALQYTLAYKSAEQQKTFYA 581 Query: 289 --GKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 582 ADAYRSSDHDPVLIDI 597 >gi|262406033|ref|ZP_06082583.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294646465|ref|ZP_06724105.1| Ser/Thr phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294806878|ref|ZP_06765703.1| Ser/Thr phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|262356908|gb|EEZ05998.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292638200|gb|EFF56578.1| Ser/Thr phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294445907|gb|EFG14549.1| Ser/Thr phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] Length = 611 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 80/304 (26%), Gaps = 63/304 (20%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K L + L +RL+++NI + + + + + Sbjct: 4 MKKIFLLISAILFIFPVQAQHTLRLMTYNIKNANGMDDICS-----------FQRVANVI 52 Query: 62 KNLDADIVFLQEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N D+V +QE+ S + V + C I + Sbjct: 53 NNASPDVVAIQEVDSMTRRSGQKYVLGEIAECTQMHACFAPAIE----FEGGKYGIGLLA 108 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K V + Q+ PL G R R + E HL Sbjct: 109 KQVPLRLQTIPLPG------REEARTLILAEFE----DYIYCCTHLSLTEED-------- 150 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + +K I K+ P +AGD N + + F Sbjct: 151 -----RMKSLEIVKSLIASCKK---PLFLAGDMNAEPESDFIK----------ELQKDFQ 192 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + K IDY + S + SDH PI Sbjct: 193 ILSNPEKHTYPAPDPKETIDYIAASKQNATGFAVISARVVN---------EPMASDHRPI 243 Query: 299 SIDY 302 ++ Sbjct: 244 LVEL 247 >gi|153805833|ref|ZP_01958501.1| hypothetical protein BACCAC_00070 [Bacteroides caccae ATCC 43185] gi|149130510|gb|EDM21716.1| hypothetical protein BACCAC_00070 [Bacteroides caccae ATCC 43185] Length = 608 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 81/304 (26%), Gaps = 63/304 (20%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K +L + L +A ++L+S+NI + + V ++ + Sbjct: 1 MKKNLLFIFAALFTFSAQAQNTLKLMSYNIKNANGMDNVC-----------NFQRIANVI 49 Query: 62 KNLDADIVFLQEMG---SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N D+V +QE+ + + V + + I + Sbjct: 50 NNASPDVVAIQEVDSMTNRSGQKYVLGEIADRTQMHGYFAPAID----YDGGKYGIGLLT 105 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K V + Q+ PL G R R + + Sbjct: 106 KQVPLRLQTLPLPG------REEARTLILAEFTD-------YIYCCTHMSLTEEDR---- 148 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + L+ S P +AGD N + + F Sbjct: 149 ---------MKSLELVKAFTSSSTKPLFLAGDMNAEPESGFIK----------ELQKDFQ 189 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + K IDY + K S I SDH PI Sbjct: 190 ILSNPKQHTFPAPDPKETIDYIATLKQNAKGFAVISAKVIN---------EPMASDHRPI 240 Query: 299 SIDY 302 ++ Sbjct: 241 LVEL 244 >gi|221639069|ref|YP_002525331.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides KD131] gi|221159850|gb|ACM00830.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides KD131] Length = 268 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 88/303 (29%), Gaps = 68/303 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++ ++NIN + L + + + D+V LQE+ S V + Sbjct: 9 PMKIATFNING----------------VKARLEALLAWLEAAEPDVVLLQEIKS---VDE 49 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP+ + +A+ + +D +R Sbjct: 50 GFPR-------AAFEEKGWHLETHGQKGFNGVAILSRLPLEDVVRGLPGDPEDVQARW-- 100 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +E V + + + V ++L + + Y + +K + + Sbjct: 101 ---IEATV-VGERAVRVCGLYLPNGNPAPGPKYDYK------LGWMERMKTRAAELLATE 150 Query: 203 VPFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P V+AGD+N + ++ I F + Sbjct: 151 EPVVLAGDYNVIPQAEDAARPEVWVTDALFLPESRAAFRRILNLGYTEAFRARTFGPGHY 210 Query: 248 NKNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + N I ID+ ++ A + D G++ SDH P+ Sbjct: 211 SFWDYQAGAWEKNNGIRIDHLLLSPQAADLMTDV-------RIDREVRSGEKPSDHVPVW 263 Query: 300 IDY 302 ++ Sbjct: 264 VEL 266 >gi|113969876|ref|YP_733669.1| PKD domain-containing protein [Shewanella sp. MR-4] gi|113884560|gb|ABI38612.1| PKD domain containing protein [Shewanella sp. MR-4] Length = 948 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 43/333 (12%), Positives = 92/333 (27%), Gaps = 56/333 (16%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDADIVFLQ 72 + +++ S+N+ +G + + + + AD+ L Sbjct: 455 AEGGNLKVASFNVLNYFNGDGQGGGFPTSRGANTLSEFERQKAKIVSAMVGISADVFGLM 514 Query: 73 EMGSYNA------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 E+ + + +N + N S ++ I + R Sbjct: 515 EIENDGFGANSAIADLVAGLNAAVGENRYAYVIPKVNGSNLSAIGTD-AITVGLIYRSDK 573 Query: 121 V-------RVLQQSYPLLG-AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK-----SF 167 V + + PL + F + NR + +NG + V+ S Sbjct: 574 VSPQGDARILSSANSPLDDAGQPQFDDSKNRPMLTQAFALNGSEESVVVAVNHLKSKGSE 633 Query: 168 CFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 C D N +C+ ++ A WI + ++ GD N Sbjct: 634 CAGDPDMNDGQGNCNITRTRAATAAGQWIAAQYPE-QGVLLIGDLNSYAKEDP-----LS 687 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + F K + + + +D+ + + ++ + I +E + Sbjct: 688 ALANAGFSELFAKLEKANPYSYVFSGESGQLDHALANAALVDKVLDVTEWHINTDEPRVL 747 Query: 287 SRG-----------------KRLSDHCPISIDY 302 R SDH P+ I Sbjct: 748 DYNEEFKTAAQVQDLYASDAYRSSDHDPVVISL 780 >gi|291515920|emb|CBK65130.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301] Length = 293 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 51/320 (15%), Positives = 91/320 (28%), Gaps = 54/320 (16%) Query: 1 MIRKYVL-ALVFFLVPCT---------------ASVAQKVRLVSWNINTLSEQEGVSLWK 44 M + L AL+ +V CT + +R++++NI + Sbjct: 1 MKKTICLWALLLIVVSCTNDDNYNDEHGDKAVIPPKGRIIRIMTYNIYGARATSPANAAD 60 Query: 45 NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104 + + D D V L E+ + + + SK Sbjct: 61 LDAL---------AEVIRRQDPDFVTLNEVDVFTNRTGKDVHQARDLAAKLGMEWHFSKA 111 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164 + AV K+ + +SY L A +R + VEI+GK ++V HL Sbjct: 112 IDRDGGEYGDAVLSKHPIIETRSYRLPCAASQPG--EDRSLCVIRVEIDGKDLYVASTHL 169 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 S QA ++ + + ++AGD N + Sbjct: 170 DHLSGDAS-----------RLVQANEIRRIRDTELDGD--LILAGDLNAIPSSNVI---- 212 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + IDY + + + + + D Sbjct: 213 ------ATMTAFLTNVGTIDQYTFPSENPTRKIDYILYAPIGHFGVQNCTVV----SRSD 262 Query: 285 IKSRGKRLSDHCPISIDYDF 304 + G SDH P+ D F Sbjct: 263 QQVDGVDASDHRPVVADIRF 282 >gi|254248065|ref|ZP_04941386.1| Metal-dependent hydrolase [Burkholderia cenocepacia PC184] gi|124872841|gb|EAY64557.1| Metal-dependent hydrolase [Burkholderia cenocepacia PC184] Length = 327 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 41/319 (12%), Positives = 85/319 (26%), Gaps = 52/319 (16%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVF 70 L+ +RL+ WNI + +GV D + L D D++ Sbjct: 32 VLLAAADQGDSTMRLIDWNIQWGRDADGV-----------VDLPRTVAAIRRLGDFDVLC 80 Query: 71 LQEM----------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 LQE+ + A++ + R A+ + Sbjct: 81 LQELTRGFDALPGRPGPDQFAELAALLPGYTIVDAIGADLPAIRPGAPRRQFGNAIATRL 140 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 L D+ + + R A+++ ++ + + V+ HL+ + + Sbjct: 141 PVGRVLRQSLPWPADAGAPSMPRAALDIELQASFGSLRVVTTHLEYYSARQ--RLAQVDA 198 Query: 181 CSLLSQQAQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPN 231 ++A D + PF ++ GDFN + D Sbjct: 199 LRDRHREACAHADQPAPAETPEGPFSATGQPRDAIVCGDFNSAFDSDAYRRFLEPIADAP 258 Query: 232 DSLIRFPKEKDSRCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + D+ + +I Sbjct: 259 GFVDAWIARHPGHTPPPTAGIYDTVQWSDGPLACDFVFVTDTLLPRVIGCEI-------- 310 Query: 284 DIKSRGKRLSDHCPISIDY 302 R SDH P+ ++ Sbjct: 311 ---DGDVRASDHQPVLLEL 326 >gi|27365439|ref|NP_760967.1| exonuclease III [Vibrio vulnificus CMCP6] gi|27361587|gb|AAO10494.1| exodeoxyribonuclease III [Vibrio vulnificus CMCP6] Length = 268 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 87/310 (28%), Gaps = 72/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKIVSFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K + Q G R Sbjct: 42 -------FPVEDVEAMGYKVYFHGQKAHYGVALLCKQEPIEIQK----GFPTDNDEHQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ G+K+ VL+ F + Q + L ++T +++ Sbjct: 91 MIIGTFLDEKGEKVTVLN-----GYFPQGDNIAHETKFPYKRQFYKDLMGYLTTHRDNGE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 V+ GD N ++ ++ +T+ F K Sbjct: 146 QVVVMGDINISPIDADIGIGEVNRKRWLKTGKCSFQPEEREWLQTLLDWGLEDTFRKLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 S + + ID + + + + D ++ S Sbjct: 206 SVDDKFSWFDYRSKGFDDNRGLRIDVILATPSLAAQCRES-------DIDYELRGIEKPS 258 Query: 294 DHCPISIDYD 303 DH PI ++ Sbjct: 259 DHAPIWATFE 268 >gi|316933979|ref|YP_004108961.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1] gi|315601693|gb|ADU44228.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1] Length = 263 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 87/303 (28%), Gaps = 67/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N L + K+ +D+V LQE+ + Sbjct: 1 MRIATWNVN----------------SVRQRLDHLLTWLKDSQSDVVCLQEIKCVDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ +A+ K D +R Sbjct: 42 -------FPREPIEALGYNVVTHGQKTFNGVALLSKYPLEEANPGLAGDDGDVHARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E +V + + V ++L + + S + Y S L+D+ Q+ + Sbjct: 92 --LEGVVSLKHGVVRVACLYLPNGNPVGSEKYPYKLS------WMARLRDYAQQRLRTEE 143 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++AGDFN + + ++ + D+ Sbjct: 144 PLILAGDFNVIPQPGDVHNPAAWTEDALFRPETRESFQALLGLGFTDALRATTDAPGQYT 203 Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A L D ++ SDH P+ Sbjct: 204 FWDYQAGAWQKNWGLRIDHLLLSPQAADRLRHVGI-------DSYVRNWEKPSDHVPVWA 256 Query: 301 DYD 303 D D Sbjct: 257 DLD 259 >gi|153808554|ref|ZP_01961222.1| hypothetical protein BACCAC_02849 [Bacteroides caccae ATCC 43185] gi|149128876|gb|EDM20093.1| hypothetical protein BACCAC_02849 [Bacteroides caccae ATCC 43185] Length = 365 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 106/355 (29%), Gaps = 68/355 (19%) Query: 2 IRKYVLALVFFLV-PCTASVAQKVR--LVSWNINTLSEQEGVSLWKNSV----------- 47 ++ +A++FF++ CT S AQ++R +VSWN+ L + SL + Sbjct: 22 RKRAAMAIIFFVMGFCTLSFAQQIRFRVVSWNVENLFDIHHDSLKNDREFLPDALRHWNY 81 Query: 48 KRTTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKV-----FPKNTWCIFYSTERL 98 R T + + + +V L E+ + + + + + + Sbjct: 82 TRYKKKLTDMARVITAVGEWEPPALVGLCEVENDTVLRDLTRRSPLKELNYRYVMTDSPD 141 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKI 157 + I A+ ++ ++L + + R + + + + G + Sbjct: 142 L--------RGIDVALLYQRDLFKLLS--FRSVSIPPLKQFRPTRDLLHVSGLLLTGDTL 191 Query: 158 WVLDIHLKSFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216 V HL S Y + +L +A + + +I GDFN Sbjct: 192 DVFVCHLPSRSGGAKESEPYRLHAARILYTEADSILN-----IRLHPQIIIMGDFNDYPT 246 Query: 217 YLGNNDDFWKTIDPND-------SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269 + K + + K +D+ ++ + Sbjct: 247 NKSIQKILEAESPSPTAPSPLKLYHLLARKAQSKNFGSYKYRGEWGLLDHLIVSGSLLNP 306 Query: 270 LIQESFSE---------------------ILYNEDDIKSRGKRLSDHCPISIDYD 303 S SE + +SDH PI +D++ Sbjct: 307 ANSFSTSENKATVSNLPFLLTEDKKYGDKEPFRTYKGMKYQGGISDHLPIYVDFN 361 >gi|224026812|ref|ZP_03645178.1| hypothetical protein BACCOPRO_03569 [Bacteroides coprophilus DSM 18228] gi|224020048|gb|EEF78046.1| hypothetical protein BACCOPRO_03569 [Bacteroides coprophilus DSM 18228] Length = 288 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 39/317 (12%), Positives = 80/317 (25%), Gaps = 42/317 (13%) Query: 1 MIRKYVLALV----FFLVPCTASVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDY 54 M + ++ L C +K+ + ++NI + + ++ WK Sbjct: 1 MKKLLIICLAGISGILTTACQEKKTEKITVNWATFNIRYDNPADSLNNWKYRK------- 53 Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 + + K DIV +QE+ + + Sbjct: 54 DTVAAFIKANQLDIVGMQEVLHNQLEDLKQRLPEYAEVGVGREDGKTQGEYAPLFYRKDR 113 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + YP + A R A ++ + ++ F Sbjct: 114 FEALDSNTFWLSQYPDSVGFIGWDGACTRIATWAKLKDRKTGKIFMAVNTH---FDHIGV 170 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 S L+ Q+ + + P V+ GDFN + + D+ Sbjct: 171 EARKNSALLIIQKIKEIV--------GDQPAVLTGDFNVSDQWDAYTTITTNSFVLKDAY 222 Query: 235 IRFPKEKDSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 K++ + ID+ + + + Sbjct: 223 KIADKQEGVN---YTFHDFGREPIDKREKIDFIFVTPQIKVKDTSIP--------QESQG 271 Query: 288 RGKRLSDHCPISIDYDF 304 LSDH P +F Sbjct: 272 ETGFLSDHNPQLATLEF 288 >gi|120599204|ref|YP_963778.1| endonuclease/exonuclease/phosphatase [Shewanella sp. W3-18-1] gi|120559297|gb|ABM25224.1| Endonuclease/exonuclease/phosphatase [Shewanella sp. W3-18-1] Length = 944 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 99/333 (29%), Gaps = 50/333 (15%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDAD 67 V T +++ S+N+ +G + + + + AD Sbjct: 450 VAPTLVDGGNLKVASFNVLNYFNGDGQGAGFPTARGANTLSEFERQKAKIVSAMVGISAD 509 Query: 68 IVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKN 120 + L E+ + +A+A + + + I + + I + R+ Sbjct: 510 VFGLMEIENDGFGANSAIADLVAGLNAAVGEARYAYIAPTGINAIGTDAITVGLIYRRDK 569 Query: 121 V-------RVLQQSYPLLGAKDS-FSRAGNRRAVELLVEING--KKIWVLDIHLKSF--- 167 V + + PL + F+ NR + +NG + + V HLKS Sbjct: 570 VTPKGAARILSSANSPLDDNQQPLFNDTRNRPMLTQAFSVNGSDEGVVVAVNHLKSKGSE 629 Query: 168 CFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 C D N +C+ ++ A + W+ ++ ++ GD N Sbjct: 630 CAGDPDLNDGQGNCNSTRTRAATAVGQWLGEQYPE-QGVLLIGDLNAYAKEDP-----LT 683 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + F + + +D+ + + ++ + I +E + Sbjct: 684 ALANAGFSELFAELRKPNPYTYVFSAESGQLDHALANAELLDKVVDVTQWHINTDEPRVL 743 Query: 287 SRG-----------------KRLSDHCPISIDY 302 R SDH P+ I Sbjct: 744 DYNEEFKTPAQIQDLYSTDAYRSSDHDPVVISL 776 >gi|237717266|ref|ZP_04547747.1| metallophosphoesterase [Bacteroides sp. D1] gi|229443249|gb|EEO49040.1| metallophosphoesterase [Bacteroides sp. D1] Length = 608 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 80/304 (26%), Gaps = 63/304 (20%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K L + L +RL+++NI + + + + + Sbjct: 1 MKKIFLLISAILFIFPVQAQHTLRLMTYNIKNANGMDDICS-----------FQRVANVI 49 Query: 62 KNLDADIVFLQEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N D+V +QE+ S + V + C I + Sbjct: 50 NNASPDVVAIQEVDSMTRRSGQKYVLGEIAECTQMHACFAPAIE----FEGGKYGIGLLA 105 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K V + Q+ PL G R R + E HL Sbjct: 106 KQVPLRLQTIPLPG------REEARTLILAEFE----DYIYCCTHLSLTEED-------- 147 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + +K I K+ P +AGD N + + F Sbjct: 148 -----RMKSLEIVKSLIASCKK---PLFLAGDMNAEPESDFIK----------ELQKDFQ 189 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + K IDY + S + SDH PI Sbjct: 190 ILSNPEKHTYPAPDPKETIDYIAASKQNATGFAVISARVVN---------EPMASDHRPI 240 Query: 299 SIDY 302 ++ Sbjct: 241 LVEL 244 >gi|117920043|ref|YP_869235.1| PKD domain-containing protein [Shewanella sp. ANA-3] gi|117612375|gb|ABK47829.1| PKD domain containing protein [Shewanella sp. ANA-3] Length = 948 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 92/337 (27%), Gaps = 56/337 (16%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDADI 68 + +++ S+N+ +G + + + AD+ Sbjct: 451 SPVLAEGGNLKVASFNVLNYFNGDGQGSGFPTARGANTLSEFERQKAKIVSAMVGTSADV 510 Query: 69 VFLQEMGSYNA------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L E+ + + +N + N S ++ I + Sbjct: 511 FGLMEIENDGFGANSAIADLVAGLNAAVGENRYAYVIPKVNGSNLSAIGTD-AITVGLIY 569 Query: 117 RKKNV-------RVLQQSYPLLG-AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK--- 165 R V + + PL + F + NR + +NG + V+ Sbjct: 570 RSDKVSPQGDARILSSANSPLDDAGQPLFDDSKNRPMLTQAFVLNGSEESVVVAVNHLKS 629 Query: 166 --SFCFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 S C D N +C+ ++ A WI ++ ++ GD N Sbjct: 630 KGSECAGDPDMNDGQGNCNITRTRAATAAGQWIAEQYPE-QGVLLIGDLNSYAKEDP--- 685 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + F K + + + +D+ + + ++ + I +E Sbjct: 686 --LSALANAGFSELFAKLEKANPYSYVFSGESGQLDHALANTALVDKVVDVTEWHINTDE 743 Query: 283 DDIKSRG-----------------KRLSDHCPISIDY 302 + R SDH P+ I Sbjct: 744 PRVLDYNEEFKTAAQVQDLYASDAYRSSDHDPVVISL 780 >gi|320086216|emb|CBY95990.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 292 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 38/313 (12%), Positives = 81/313 (25%), Gaps = 75/313 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++ VS+NIN L + L + D++ LQE Sbjct: 22 AVTMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 62 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++FP + ++ H +A+ K + + Sbjct: 63 DEMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKATPISVRR-----GFPDDGEE 110 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + + I V++ F + +Q Q L++++ + + Sbjct: 111 AQRRIIMAEIPSPLGNITVIN-----GYFPQGESRDHPLKFPAKAQFYQNLQNYLETELK 165 Query: 201 SLVPFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFP 238 P +I GD N + + + + F Sbjct: 166 CDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMSRLLK-WGLVDTFR 224 Query: 239 KEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + + ID + + + D Sbjct: 225 EANPQTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAERCAETGI-------DYDIRSM 277 Query: 290 KRLSDHCPISIDY 302 ++ SDH P+ + Sbjct: 278 EKPSDHAPVWATF 290 >gi|312130952|ref|YP_003998292.1| endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] gi|311907498|gb|ADQ17939.1| Endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] Length = 274 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 44/284 (15%), Positives = 80/284 (28%), Gaps = 29/284 (10%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++ + S+N+ + ++G + W N ++++ K + DI QE + + Sbjct: 19 KELIVASYNLRMDTPKDGPNAWPNRK-------EMVKELIKYHEFDIFGTQEGFIHQ-LN 70 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + S + S + P K + Sbjct: 71 DISELKEYAFTGSGRDDGKQAGEHSAIFYRKKRFKLLDSGDFWLSEDPDKPGKGWDATCC 130 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 NR A + K ++ F S L+ + Q + Sbjct: 131 NRIASWGKFKDLKTKKTFYFFNVH---FDHQGIVARRESGQLMISKIQEIA--------G 179 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-KIPIDYF 260 P ++ GDFN D S I P N+ K K IDY Sbjct: 180 KFPVILTGDFNSLPETDQIKAISGLLKDAYTSSIAPPYGPVGTANSFKLDAPLKNRIDYI 239 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + Y + SDH PI+ F Sbjct: 240 FVSG---------TMEVLKYASLTDHKDQRYPSDHLPIAAKIRF 274 >gi|298291878|ref|YP_003693817.1| exodeoxyribonuclease III [Starkeya novella DSM 506] gi|296928389|gb|ADH89198.1| exodeoxyribonuclease III [Starkeya novella DSM 506] Length = 262 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 39/306 (12%), Positives = 80/306 (26%), Gaps = 71/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +R+ +WN+N + D+V LQE+ Sbjct: 1 MRIATWNVN----------------SVKQRLEHAVAWLGETRPDVVCLQEIKCVDEAFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F + + +AV + S +D SR Sbjct: 45 EAFESLGYNVAVH------------GQKGFNGVAVLSRLPFDEVSSGLPGDDEDVQSRF- 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E++V + I+L + +D+ + Y + LK + + Sbjct: 92 ----IEVVVSTPEGVARICGIYLPNGNPVDTEKYPYK------LNWMKRLKAHVANRLAY 141 Query: 202 LVPFVIAGDFNRKI---NYLGNNDDFWKTIDPNDSLIRFP-----------KEKDSRCNA 247 P ++ GD+N + + + F + Sbjct: 142 EEPLIVCGDYNVIPEPVDAANPAAWVNDALFLPQTRSAFRELIHLGMTEAVRATTDEPGL 201 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ A L D ++ SDH P+ Sbjct: 202 YSFWDYQAGAWQKNNGIRIDHLLLSPQAADRLKAVGI-------DKHVRAWEKPSDHVPV 254 Query: 299 SIDYDF 304 +D + Sbjct: 255 WVDLAY 260 >gi|254524231|ref|ZP_05136286.1| endonuclease/exonuclease/phosphatase family protein [Stenotrophomonas sp. SKA14] gi|219721822|gb|EED40347.1| endonuclease/exonuclease/phosphatase family protein [Stenotrophomonas sp. SKA14] Length = 295 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 82/281 (29%), Gaps = 36/281 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +V++N++ E S + K L D V LQE+ V Sbjct: 47 MSMVTFNLHHDRED------------WPSRRRTILAELKRLQPDAVALQEVIQRRNVR-- 92 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + W R + S A+ + + + L D R Sbjct: 93 -NQAQWLASQLGYRYVFVSTDPVGAPKRYGNALLTRRPILAHGDHLLQPLDDY------R 145 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 L ++++G + V HL E + Q + L +I+ + Sbjct: 146 TVAHLRIDVDGTPVNVYATHLN--------ERNDERGQGIRRSQVEDLLRYISTT-SAGA 196 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 P VIAGDFN ++ ++ D S+ + ID+ Sbjct: 197 PVVIAGDFNALVDAGDLSELRSHYGDSYGSVHVNTDLAGVSTLNRHYYQAPSRIDHIFFQ 256 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 Q+ E D G+ SDH + F Sbjct: 257 QDEMV------AREAKLLFDQPDDSGRWASDHYGVWTRLQF 291 >gi|74318784|ref|YP_316524.1| hypothetical protein Tbd_2766 [Thiobacillus denitrificans ATCC 25259] gi|74058279|gb|AAZ98719.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 281 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 84/305 (27%), Gaps = 49/305 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEM-------G 75 ++L+SWNI +G D L + ++L A D++ LQE+ Sbjct: 1 MKLLSWNIQWGRGMDG-----------RVDLARLVRAIEHLGAFDVICLQEVAVNFPALP 49 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + Y+ + ++ A+ + + L + Sbjct: 50 GSRGEDQFAQLAAALPGYTALYVAATDVPGASGRSRFGNAIFSRLPVGQVWRHALPWRPE 109 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + + R +E ++ + VL HL+ + + L +A + W Sbjct: 110 AGVPSMQRALLEAVILREAGPLRVLTTHLEYYSQGQRQL--QIEAIRNLHAEACAMTRWA 167 Query: 196 TQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPN--------DSLIRFP 238 ++E PF ++ GD N + D P Sbjct: 168 APEEERGGPFASQGRPAQAILCGDMNFSPSAAERARLLAPFADATPAWVDAWTALHPGVP 227 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + D+ + L D SDH P+ Sbjct: 228 HPPSVGIHPVDFVDHPECFDFVFATEGLSAAL-----------SDYGVDAETEASDHQPV 276 Query: 299 SIDYD 303 + D Sbjct: 277 WVALD 281 >gi|255010722|ref|ZP_05282848.1| hypothetical protein Bfra3_16398 [Bacteroides fragilis 3_1_12] Length = 344 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 44/349 (12%), Positives = 91/349 (26%), Gaps = 57/349 (16%) Query: 1 MIRKYVLALVFFLVPCTASVAQK-VRLVSWNINTLSEQEGVSLWKNSV-----------K 48 M+R + L L+ ++ Q R+V WN + SL + Sbjct: 1 MLRLFFLLLISSTSLFLSAQNQPPFRVVFWNTENFFDTRHDSLKNDREFLPHSLRHWGYS 60 Query: 49 RTTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104 R + + + ++ L E+ + + + + + + Sbjct: 61 RYKKKIDNVARTLAAVGEWNFPVLIGLCEVENDTVMRDL---TLYSPLKEADYRYVMTHS 117 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIH 163 I A+ ++ ++L + + + + R + + + + G + VL H Sbjct: 118 SDQRGIDVALLYQRDRFKLL--TCSSIPVGNFENHRPTRDILHVSGLLLTGDTLDVLVAH 175 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNN 221 L S S AQ LK+ +I GDFN Sbjct: 176 LPSRSGG------ARQSEPYRLFAAQKLKNAADSLMCVRRSAKLIIMGDFNDYPTDKSVK 229 Query: 222 DDFWKTIDPNDSLI------RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + K K+ + K +D+ ++ Sbjct: 230 QVLKALSPEENPDHKQLYHLLARKAKNRNFGSYKYQGEWGLLDHLIVSGTLLDTSGTLFT 289 Query: 276 SEI---------------------LYNEDDIKSRGKRLSDHCPISIDYD 303 E + SDH P+ D++ Sbjct: 290 EEKKASVLRLPFLLIKDEKYGGMQPFRTYIGMKYQGGYSDHLPVYTDFE 338 >gi|237747770|ref|ZP_04578250.1| exodeoxyribonuclease III [Oxalobacter formigenes OXCC13] gi|229379132|gb|EEO29223.1| exodeoxyribonuclease III [Oxalobacter formigenes OXCC13] Length = 255 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 88/304 (28%), Gaps = 74/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + Q+ ++ D++ LQE + Sbjct: 1 MKIATWNVNSL----------------KVRLPHVLQWLEDNPVDVLCLQETKLTDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ K + + Sbjct: 41 ------KFPVMEIGAAGYQVAFTGQKTYNGVAILSKKPVTDIVKN------NPLFPDEQQ 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R V V+ I ++ ++ + + S + +Y + L W+ ++++ Sbjct: 89 RIVAATVDN----IRIVCAYVPNGQAVGSEKYSYKLD------WLRSLTQWLAEERQKHP 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + GD+N D ++ + D + + + + + Sbjct: 139 YLALLGDYNIAPEDRDVYDPVAWEGNVLVSPPERDAFRALQDIDFIDAY-RLFEQPEKSY 197 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ + + D I + + SDH P+ Sbjct: 198 SWWDYRQLGFQKNRGLRIDHILLSKALAPHCTACTI-------DRIPRKWTQPSDHTPVI 250 Query: 300 IDYD 303 + D Sbjct: 251 AELD 254 >gi|258648749|ref|ZP_05736218.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella tannerae ATCC 51259] gi|260851066|gb|EEX70935.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella tannerae ATCC 51259] Length = 337 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 35/346 (10%), Positives = 92/346 (26%), Gaps = 56/346 (16%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRT 50 +++ + + + + ++ R++++N+ + ++ + Sbjct: 1 MKRLLFVFFYLCLLTAGAQSR-FRVMTYNVENAFDTIHDEGKQDFDFLPTGRLHWDTPKY 59 Query: 51 TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 + + + + +V L E+ + + + +S ++ Sbjct: 60 RAKLSRIASVIAGVGEMQPPKLVALCEVENARVIEDLL---HHTRLHSFNYRYCMTESAD 116 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLK 165 I A+ + +L + + R + + + +G + V +HL Sbjct: 117 RRGIDVALLYQPSTFHLLYMDTLRVIPANKHEN-PTRDILHVCGLVPSGDTLSVFVVHLP 175 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDD 223 S + + AQ L+ I + VI GDFN + Sbjct: 176 SRRGGV------RRTMPYRCRVAQRLRQEIDGLTRNGRDRKVVIMGDFNDEHTDPSIATV 229 Query: 224 F----WKTIDPNDSLIRFPKEKDSRC---NANKNLRNKIPIDYFVMDQNAYK-------- 268 W L + + +K +D +++ Sbjct: 230 LEARKWTDAIQPPFLCVLTADLKAANGIQGTHKFQGRWAQLDQIIVNDRLLTTEGLHTSP 289 Query: 269 ------------FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + Y SDH P+ +D+ Sbjct: 290 KDCFIFTDAPLLKYDAGDHGVVPYRSFLGSFYQGGFSDHLPVVVDF 335 >gi|254495120|ref|ZP_05108044.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter sp. MED152] gi|85819470|gb|EAQ40627.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter sp. MED152] Length = 325 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 99/296 (33%), Gaps = 44/296 (14%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--- 80 + ++NI LS ++ +++ + ++ DI+ QE+ + Sbjct: 54 FSIATYNIGYLSGMTNNRPVPKPKSLFKANLQKVKKETQAVNPDIIAFQEIDYNASRSYH 113 Query: 81 ---AKVFPKNTWCIFYSTERLINHSKRDSNNDI-------HTAIAVRKKNVRVLQQSYPL 130 + + T + I + ++ K Q+ L Sbjct: 114 INQEEEVASLGYNYSARTVNWDENYLPFPYWPISMHFGKVISGQSILSKYPLANQERVVL 173 Query: 131 LGAKDSFSRAG----NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 +DS R A + INGK+I +++IHL++F ++ Sbjct: 174 SRVEDSPFYRDAFYLERLAQIVKANINGKEIVIINIHLEAFDKP------------TRAK 221 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 Q Q ++ + ++ P ++ GDFN + + +T +D++ D+ N Sbjct: 222 QFQEVEAIFNKY-KNDYPTLLLGDFNAR---ARDKSSVVQTFFKDDNIGNAAFNYDAIAN 277 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IDY + I Y + + ++ SDH P+ + + Sbjct: 278 TFDTKDPYERIDYIFYTKE-----------TIEYVSGRVLNEYEQASDHLPVFMKF 322 >gi|281338153|gb|EFB13737.1| hypothetical protein PANDA_004239 [Ailuropoda melanoleuca] Length = 368 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 38/297 (12%), Positives = 84/297 (28%), Gaps = 20/297 (6%) Query: 18 ASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 S +R++ WNI L E ++ + L+ + DI+ LQE+ Sbjct: 74 PSSHPPIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYHPDILCLQEV 133 Query: 75 GSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 Y + + + + + + +N A+ + +++ + L Sbjct: 134 DHYFDTFQPLLGRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLT 193 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 A + A+ +E + C L+ Sbjct: 194 AMTLKTNQ---VAIAQTLECKESSRQFCIAVTHLKARPGWERFRSAQGC-------DLLQ 243 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + + VP ++ GDFN + +++ + + + S Sbjct: 244 NLQNITHGAKVPLIVCGDFNAEPTEEVYKHFASSSLNLSSAYKLLSADGQSEPPYTTWKI 303 Query: 253 N-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +DY Q+A + + SDH + D+ F Sbjct: 304 RTSGECRHTLDYIWYSQHALRVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 360 >gi|260913979|ref|ZP_05920453.1| exodeoxyribonuclease III [Pasteurella dagmatis ATCC 43325] gi|260632066|gb|EEX50243.1| exodeoxyribonuclease III [Pasteurella dagmatis ATCC 43325] Length = 267 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 34/311 (10%), Positives = 82/311 (26%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++S+NIN L + L + D++ LQE + Sbjct: 1 MKIISFNINGL----------------RARPHQLEAIIERYQPDVLGLQEIKVADEVFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + +F+ H +A+ K + A+D+ R Sbjct: 45 ELVEHLGYHVFHH------------GQKGHYGVALLTKQEPKAVRKGFPTDAEDAQKR-- 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + E + + V++ F + + L+ ++ + Sbjct: 91 ---IIMADFETDFGLLTVVN-----GYFPQGESRQHETKFPAKEKFYADLQQYLEKDHNV 142 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 P +I GD N L ++ + + F Sbjct: 143 DNPIIIMGDMNISPTDLDIGIGDENRKRWLRTGKCSFLPEEREWMNRLYGYGLVDTFRHL 202 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID+ + + + + ++ Sbjct: 203 NPDVNDKFSWFDYRSKGFDDNRGLRIDHIIANHSLAARCVDTGI-------ALDIRAMEK 255 Query: 292 LSDHCPISIDY 302 SDH P+ ++ Sbjct: 256 PSDHAPVWAEF 266 >gi|197123175|ref|YP_002135126.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. K] gi|196173024|gb|ACG73997.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. K] Length = 261 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 81/285 (28%), Gaps = 55/285 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 R+V+WN++ L D + + ++ AD+ LQE+G+ Sbjct: 3 FRVVTWNVHGLRGAGRRP-----------DPERIARVLDDIGADVAGLQEVGAR------ 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIH-----TAIAVRKKNVRVLQQSYPLLGAKDSFS 138 P + RL + H A+ ++ ++Y L Sbjct: 46 LPGADAHAAEALARLTGLNGAFGPTLQHARGFAYGNAILSRHPIDATRTYDLSVPGR--- 102 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R + +++ ++ V HL Q A L I + Sbjct: 103 --EPRGCLRADLDLGPMRVHVFAAHLGLHWR------------ERRRQAAALLSADILRD 148 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 P V+ GDFN + +T+ P + +D Sbjct: 149 AALSHPLVLVGDFNSPSDRSAVPRWLRRTLTDCAVAAGRPAATFPSAWP------LLRLD 202 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D ++ +R SDH P+ ++ + Sbjct: 203 RAYVDAAL--RVLGCEVIRTPL--------ARRASDHLPLVVELE 237 >gi|86138524|ref|ZP_01057097.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. MED193] gi|85824584|gb|EAQ44786.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. MED193] Length = 331 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 57/329 (17%), Positives = 103/329 (31%), Gaps = 49/329 (14%) Query: 24 VRLVSWNINTLS----EQEGVSLWKNSVKRTTSDY----TLLRQYAKNLDADIVFLQEMG 75 +RLV++NI + + + + L S R D + + LDAD V + E Sbjct: 1 MRLVTYNIEWFAHLFDDADNLMLDDQSSGRYGVDRYTQGRAIAHVLQRLDADAVMVVEAP 60 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINH-SKRDSNNDIHTAIAVR-------------KKNV 121 + + + R S ++ A+ K+ Sbjct: 61 NTGRKQRCTRALERFAAEAGLRTDTAVSGFATDTHQEIALLYDPAVLDVEADPQASKRAP 120 Query: 122 RVLQQSYPLLGAKDSFSR-AGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENT--- 176 R L D R ++ +EL V G + ++ HLKS + Sbjct: 121 RFDDSFLIDLDVDDRMDRVRFSKPPLELQVRTKGGMALRLIGAHLKSKAPHGAETAEEVA 180 Query: 177 --YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-------- 226 + QA WL I + E+ ++ GD N F K Sbjct: 181 RISIANRRKQLAQAIWLHRRIKEHVEAGENVIVMGDLNDGPGLDEYERLFGKSSVEIVMG 240 Query: 227 --TIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYK----FLIQESF 275 DP+ + P+E + + +DY ++ + I F Sbjct: 241 AELTDPHAQSLLKPREPVLPSTSRFYNPETKRYFRALLDYIMISHGLEAYGPHWRIWHPF 300 Query: 276 SE-ILYNEDDIKSRGKRLSDHCPISIDYD 303 + Y++ ++ SDH P+S+D + Sbjct: 301 EDAECYDDIPLREALLAASDHFPVSLDLE 329 >gi|282901382|ref|ZP_06309307.1| Endonuclease/exonuclease/phosphatase [Cylindrospermopsis raciborskii CS-505] gi|281193661|gb|EFA68633.1| Endonuclease/exonuclease/phosphatase [Cylindrospermopsis raciborskii CS-505] Length = 2198 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 45/335 (13%), Positives = 95/335 (28%), Gaps = 55/335 (16%) Query: 19 SVAQKVRLVSWNINTLSEQ----------EGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 +V +++ +N+ + +S+ L ++AD+ Sbjct: 1655 TVGGSIKVTGFNVLNYFKTIDLPGVNTVIGQDPRGADSMDEFNRQTDKLVTALLTINADV 1714 Query: 69 VFLQEMGSY-------NAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKN 120 + L E+ + N + + + T +N + +D I + + Sbjct: 1715 LGLVELENDFLAGSSGNGIEYLTNQLNAKAGAGTYAWVNPGTQFVGSDAIAVGLIYKPMA 1774 Query: 121 VRVLQQSYPLLGAKDSFSR----AGNRRAVELLVE--INGKKIWVLDIHLKSF------- 167 V +L L ++ NR AV + +K V+ HLKS Sbjct: 1775 VSLLGDVAILNSSEFMDPNNTGQDRNRPAVAQTFQDLATNEKFTVVVNHLKSKGASELTD 1834 Query: 168 --CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDD 223 + + ++ Q L DW+ + +++ GDFN Sbjct: 1835 INSPDYDQNDGQGFWNNTRTKAIQALVDWLNTNPTKVNDSDYLLLGDFNAYAQEDPV--- 1891 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 K + + + +DY + + + + I +E Sbjct: 1892 --KVLKNAGYIDLASAFHQGTTASYVFDGQTGTLDYAFASASLAQQVTGATEWAINSDEA 1949 Query: 284 DIKSRG---------------KRLSDHCPISIDYD 303 D R SDH P+ + + Sbjct: 1950 DGIDYNLDFGRDAAIFDGTTPYRSSDHDPVIVGLN 1984 >gi|56961986|ref|YP_173708.1| hypothetical protein ABC0204 [Bacillus clausii KSM-K16] gi|56908220|dbj|BAD62747.1| conserved hypothetical protein [Bacillus clausii KSM-K16] Length = 295 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 31/285 (10%), Positives = 83/285 (29%), Gaps = 31/285 (10%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 K++++S+N+ + S + ++ + + + DI+ QE Sbjct: 33 DKMKVMSFNLRNSGGND------PSPHSWSERRPTVQSFLETEEPDILGTQEALYDQVTH 86 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + R + P + S+ Sbjct: 87 LDEDLPDYEWIGIG-REGGTDGEFMAIYYKSDRFKPTDTGHYWLSDTPDVVGSTSWGNTI 145 Query: 142 NRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R E G++ + ++ H S + A+ + + I + Sbjct: 146 PRMVTWAKFEEEATGEQFYFVNTHFDH------------QSEESRQKSAELIIEKINEY- 192 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD--SRCNANKNLRNKIPI 257 + +P ++ GDFN + + + + + + K + N + Sbjct: 193 DENLPIILTGDFNTTPDSVSHGILTGEGLFEDPWNYAEEKINEELGTFNGFNDPTGGG-- 250 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +++ ++ +D ++ + SDH P+ ++ Sbjct: 251 -----TDNKIDWVLTKNIFAESIGINDYRNGEQYPSDHFPVIAEF 290 >gi|289665777|ref|ZP_06487358.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 303 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 53/287 (18%), Positives = 89/287 (31%), Gaps = 36/287 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 +++ +++ LV+ N++ E + + + K L D++ LQE+ Sbjct: 40 PSSTAPREMTLVTLNLHHDRED------------WPARRAYIAKELKQLAPDVIALQEVI 87 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 V + W S A+ + + L D Sbjct: 88 ERRG--SVENQAAWLARKLGYDYTFASVDPVGAPKRYGNALLSRRNVLATHQRLLQPLDD 145 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R A L V+++G+ + V HL E T + + +Q L D++ Sbjct: 146 Y------RVAAHLQVDVDGQPVNVYVTHLN--------ERTDARGTATRKRQVTDLLDFV 191 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 P VIAGDFN + L D S+ R S N Sbjct: 192 ASN-SEQAPVVIAGDFNTAADTLDLEALRKGYGDSYGSVHRNSDATVSTLNMQV-FDKPA 249 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ QN + Y E G+ SDH + + Sbjct: 250 RIDHVFFQQNRLLAREARILFDTPYAE------GRWASDHYGVWVRL 290 >gi|224827165|ref|ZP_03700261.1| Endonuclease/exonuclease/phosphatase [Lutiella nitroferrum 2002] gi|224600674|gb|EEG06861.1| Endonuclease/exonuclease/phosphatase [Lutiella nitroferrum 2002] Length = 249 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 82/287 (28%), Gaps = 48/287 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + +++ ++NI+ SV + + +L +D++FLQE+ N + Sbjct: 2 EPLKVSTYNIH----------KGMSVLNRHVRVEDMAKALDSLSSDVMFLQEVQGKNLLR 51 Query: 82 KVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + R + S H AV + Sbjct: 52 TLSHHEWPRIPQHQYLARQLGRKAAYGLNASYGHGHHGNAVLTRFPITS-----WCNLDI 106 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 S +R +R + ++E G V+ + +Q L +I Sbjct: 107 SVNRFESRGVLHCVLEPPGWSTPVIALCAHLNLRAGD-----------RRKQYATLARYI 155 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + P ++AGDFN + + + N F + + + Sbjct: 156 RDNVPAHYPLILAGDFND-----WRGEATDRLLAENGLHEVFQHLFGQHARSFPSRLPLL 210 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + + LSDH P+S + Sbjct: 211 TLDRIYVRGLRPVNAKAH-----------HGAPWNGLSDHLPLSAEL 246 >gi|187929032|ref|YP_001899519.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12J] gi|187725922|gb|ACD27087.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12J] Length = 269 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 91/304 (29%), Gaps = 63/304 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAK 82 +R+ +WN+N+L R L + + D++ LQE+ + Sbjct: 1 MRVATWNVNSL------------KVRLPHVLQWLAEREADATPIDLLCLQELKLPDDRYP 48 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + ++ + + +A+ + V + + Sbjct: 49 LAELDA----------AGYTSLFTGQKTYNGVAILSRKASVPEGR--DVVKNIPGFADEQ 96 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +R V +++G + V+ ++ + LDS + Y + + L+ W+T + + Sbjct: 97 QRIVAATYDVDGGPVRVISAYIPNGQALDSDKFVYK------LRWLEALQAWLTSELAAN 150 Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GDFN ++ + + F + Sbjct: 151 PRLMLLGDFNIAPEDRDVHDPKKWEGQNLVSPEERAAFRAMQGAGLVDAFRMFEQED-KL 209 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ++ ID+ ++ K D + ++ SDH P+ Sbjct: 210 FSWWDYRMFGFKRNAGLRIDHIMLSPELAKLCESCHI-------DRVPRTWEQPSDHTPV 262 Query: 299 SIDY 302 Sbjct: 263 VAAL 266 >gi|171914576|ref|ZP_02930046.1| Endonuclease/exonuclease/phosphatase [Verrucomicrobium spinosum DSM 4136] Length = 804 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 38/281 (13%), Positives = 90/281 (32%), Gaps = 44/281 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R++S+N ++ +G + + + + D+V +QE+ + ++ Sbjct: 550 LRVMSYNAHSCIGMDGRVSPR-----------RIARVINHYSPDLVAVQELEHGRSRSRG 598 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + T + ++ + A+ + + ++ L ++ R Sbjct: 599 EDQATRVAELTGYEVVFCP-TVTRAAERYGHALLSRRPVEVVKTGLLPADPGNW-WPEPR 656 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKKES 201 A+ + + G+ + ++ HL S Q L DW+ Sbjct: 657 SAIWVRTTLEGQVVNMVATHLGL-------------SSRERVAQMLSLLGPDWLGPVV-E 702 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 P V+ GDFN + G D + N +L+ I +D+ Sbjct: 703 TEPVVLCGDFNFGVGSPGYKLAITALRDVQ-----SITKGWRPVNTFSSLQPFIRLDHVF 757 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + ++ +++ SDH P+ D Sbjct: 758 ISSHFTVEKLRVPRTQVTRV----------ASDHLPLVADL 788 >gi|332827905|gb|EGK00627.1| hypothetical protein HMPREF9455_02901 [Dysgonomonas gadei ATCC BAA-286] Length = 254 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 90/310 (29%), Gaps = 69/310 (22%) Query: 2 IRKYVLALVFFLVPCTASVA--------QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD 53 ++K LA F + R++S+NI + ++ + Sbjct: 1 MKKLFLACFFMAFTFSLFAQKEQYPQKKDTFRVMSYNIRNARGMDNIT-----------N 49 Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 Y + +++ D++ +QE+ S + + + S Sbjct: 50 YQRIADIIESVSPDVLAIQELDSVTRRSNGIDVLGKLSNLTGMY-AVYGAAISFQGGKYG 108 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 + + K + ++ PL G + R + + E + + HL Sbjct: 109 VGILSKMSPLSSRNIPLPG------KEEQRTLLVVEFEDH----IIFATHLSLT------ 152 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPN 231 + S +++QQA+ P + GD N + + WK ++ Sbjct: 153 KEDRKSSIEIINQQAKAY----------GKPVFLIGDLNAEPDSEEIKLLSAGWKILNNV 202 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + IDY + ++ D Sbjct: 203 EDM------------TFPSANPDRVIDYIM-----GYTETGSTYPVYHAKVLD----DSI 241 Query: 292 LSDHCPISID 301 SDH P+ +D Sbjct: 242 ASDHRPLFVD 251 >gi|319426026|gb|ADV54100.1| Endonuclease/exonuclease/phosphatase [Shewanella putrefaciens 200] Length = 944 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 99/333 (29%), Gaps = 50/333 (15%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDAD 67 V T +++ S+N+ +G + + + + AD Sbjct: 450 VAPTLVDGGNLKVASFNVLNYFNGDGQGAGFPTARGANTLSEFERQKAKIVSAMVGISAD 509 Query: 68 IVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKN 120 + L E+ + +A+A + + + I + + I + R+ Sbjct: 510 VFGLMEIENDGFGANSAIADLVAGLNAAVGEARYAYIAPTGINAIGTDAITVGLIYRRDK 569 Query: 121 V-------RVLQQSYPLLGAKDS-FSRAGNRRAVELLVEINGKK--IWVLDIHLKSF--- 167 V + + PL + F+ NR + +NG + + V HLKS Sbjct: 570 VTPKGAARILSSANSPLDDNQQPLFNDTRNRPMLTQAFNVNGSEEGVVVAVNHLKSKGSE 629 Query: 168 CFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 C D N +C+ ++ A + W+ ++ ++ GD N Sbjct: 630 CAGDPDLNDGQGNCNSTRTRAATAVGQWLGEQYPE-QGVLLIGDLNAYAKEDP-----LT 683 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + F + + +D+ + + ++ + I +E + Sbjct: 684 ALANAGFSELFAELRKPNPYTYVFSAESGQLDHALANAKLLDKVVDVTQWHINTDEPRVL 743 Query: 287 SRG-----------------KRLSDHCPISIDY 302 R SDH P+ I Sbjct: 744 DYNEEFKTPAQIQDLYSTDAYRSSDHDPVVISL 776 >gi|314934911|ref|ZP_07842270.1| sphingomyelin phosphodiesterase [Staphylococcus caprae C87] gi|313652841|gb|EFS16604.1| sphingomyelin phosphodiesterase [Staphylococcus caprae C87] Length = 329 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 44/318 (13%), Positives = 98/318 (30%), Gaps = 33/318 (10%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 +LA + +++ + N+ L +L+ N + +D Y + Sbjct: 20 SLLLAFSTITHANESKSEDSLKITTHNVYFLPT----ALYPNWGQSQRADLISKANYIQ- 74 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIA 115 D D+V E+ A ++ Y T + + + Sbjct: 75 -DQDVVIFNELFDKKASNRLLTNLQSQYPYQTPIVGKGTDGWQKTSGTYRKVKPVSGGVG 133 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + K V Q+ + + +AGN+ + + NGK ++ HL++ + Sbjct: 134 IVSKWPIVEQEQHIYKDGCGA-DKAGNKGFAYIKINKNGKYQHIIGTHLQA----EDPIC 188 Query: 176 TYSPSCSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + Q +K +I + P I GD N I + ++ + Sbjct: 189 IKGKDKKIRQSQMDEIKQFIKDKHIPKNEPVYIGGDLNV-IKGSEEYQQMPENLNVSLPT 247 Query: 235 IRFPKEKDSRCNANKNLRN------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 +N + +DY ++D++ + + + + + Sbjct: 248 QFEGNAYSWDTQSNGIAKYNYPKLEPQHLDYILLDRDHAQPSSWHNNVHKVKSPEWSVKS 307 Query: 289 GKR------LSDHCPISI 300 + SDH P+S Sbjct: 308 WGKTYKYNDYSDHYPLSA 325 >gi|309782573|ref|ZP_07677296.1| exodeoxyribonuclease III [Ralstonia sp. 5_7_47FAA] gi|308918664|gb|EFP64338.1| exodeoxyribonuclease III [Ralstonia sp. 5_7_47FAA] Length = 269 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 88/304 (28%), Gaps = 63/304 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAK 82 +R+ +WN+N+L R L + + D++ LQE+ + Sbjct: 1 MRVATWNVNSL------------KVRLPHVLQWLAEREADATPIDLLCLQELKLPDDRYP 48 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + ++ + + +A+ + V + + Sbjct: 49 LAELDA----------AGYASLFTGQKTYNGVAILSRKASVPEGRDVVKNIPGFTDDQQR 98 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V +++G + V+ ++ + LDS + Y + + L+ W+ + + Sbjct: 99 --IVAATYDVDGGPVRVISAYIPNGQALDSDKFVYK------LRWLEALQAWLASEMAAN 150 Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GDFN ++ + + F + Sbjct: 151 PRLMLLGDFNIAPEDRDVHDPKKWEGQNLVSPEERAAFRAMQAAGLVDAFRMFEQED-KL 209 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ++ ID+ ++ K D + ++ SDH P+ Sbjct: 210 FSWWDYRMFGFKRNAGLRIDHIMLSPELAKLCESCHI-------DRVPRTWEQPSDHTPV 262 Query: 299 SIDY 302 Sbjct: 263 VAAL 266 >gi|312961749|ref|ZP_07776247.1| exodeoxyribonuclease III [Pseudomonas fluorescens WH6] gi|311284008|gb|EFQ62591.1| exodeoxyribonuclease III [Pseudomonas fluorescens WH6] Length = 270 Score = 100 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 35/313 (11%), Positives = 83/313 (26%), Gaps = 76/313 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L + D++ LQE ++ Sbjct: 1 MKIVSFNINGL----------------RARPHQLAALIEKHQPDVIGLQETKVHDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + H +A+ + + L +D+ R Sbjct: 41 ------QFPLAEVQALGYHVYYHGQKGHYGVALLSRQEALSVHKGFLGDEEDA-----QR 89 Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + +G + V++ F + + + L+ + + + Sbjct: 90 RFIWGTFADEHGNPVTVMN-----GYFPQGESRDHPTKFPAKQRFYEDLQHLLESQFSND 144 Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241 V+ GD N ++L ++ + + F Sbjct: 145 QALVVMGDVNISPEDCDIGIGADNAKRWLKTGKCSFLPEEREWMARLKNWGLVDSFRHLN 204 Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + + D + Sbjct: 205 PDVTDRFSWFDYRSRGFEDEPKRGLRIDVIMASTGLVHRVKDAGV-------DYDLRGLE 257 Query: 291 RLSDHCPISIDYD 303 + SDH PI ++ Sbjct: 258 KPSDHAPIWLELS 270 >gi|313207216|ref|YP_004046393.1| endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM 15868] gi|312446532|gb|ADQ82887.1| Endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM 15868] gi|315022982|gb|EFT36003.1| endonuclease/exonuclease/phosphatase [Riemerella anatipestifer RA-YM] gi|325335338|gb|ADZ11612.1| Metal-dependent hydrolase [Riemerella anatipestifer RA-GD] Length = 286 Score = 100 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 104/308 (33%), Gaps = 39/308 (12%) Query: 2 IRKYV--LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 ++ + L L + L+ + +Q ++L+++NI + +G+++W+N + T Sbjct: 1 MKTIITNLFLAWVLLFSSFYSSQNLKLMTFNIRYDNPDDGLNVWRNRILNTK-------N 53 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 + DI+ QE+ + ++ + N + + + Sbjct: 54 LLEFYIPDIIGFQEVLPNQYLDLKTILPSYNSYSLGRDSENQGEACPL------FFNKNR 107 Query: 120 NVRVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + ++ L + ++ NR ++++ N K + +L Sbjct: 108 FELLDSGTFWLSPTPNKISKAWGANLNRICSWVMLKDNISKSTLKIYNLHF--------- 158 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 S ++++I + +E + ++ GDFN + + +L Sbjct: 159 -DHESELSRKNSLALIQEYINKDREQNIYTLVMGDFNTTFSNQELLQQVLPPLAEASTLA 217 Query: 236 RFPKEKDSRCNAN-KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + + A K + IDY + ++ + Y + G+ D Sbjct: 218 KKTLLNNGTFQAFGKKVGQSPRIDYIFVPKDT---------EVLQYQILSNQFYGQYPYD 268 Query: 295 HCPISIDY 302 H P+ + Sbjct: 269 HFPVLTEI 276 >gi|289673873|ref|ZP_06494763.1| exonuclease III [Pseudomonas syringae pv. syringae FF5] Length = 270 Score = 100 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 34/314 (10%), Positives = 82/314 (26%), Gaps = 78/314 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDEQFPQ 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + H +A+ +N + G + + Sbjct: 45 AEVEALGYHVHFH------------GQKGHYGVALLSRNAPLALHK----GFEGDDEESQ 88 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + NG+ + +++ F + + + L+ + + + Sbjct: 89 KRFIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQTLLEGQFRN 143 Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240 P ++ GD N ++L ++ + + + F Sbjct: 144 DQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRHL 203 Query: 241 KDSRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + ID + + + D Sbjct: 204 YPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKEAGV-------DYDLRAM 256 Query: 290 KRLSDHCPISIDYD 303 ++ SDH PI ++ Sbjct: 257 EKPSDHAPIWLELS 270 >gi|304386652|ref|ZP_07368935.1| exodeoxyribonuclease III [Neisseria meningitidis ATCC 13091] gi|304339271|gb|EFM05348.1| exodeoxyribonuclease III [Neisseria meningitidis ATCC 13091] Length = 256 Score = 100 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 88/305 (28%), Gaps = 73/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + DI+ LQE Sbjct: 1 MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ +N + R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVH-----IGLPALPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V++++ + LDS + Y Q L +++ + Sbjct: 90 RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRYG 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D ++K + + Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWFKNLLDLGLTDSLRQVHPEGAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ + L D +R SDH P++ Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMAEALKDV-------RVDLETRALERPSDHAPVT 251 Query: 300 IDYDF 304 ++D+ Sbjct: 252 AEFDW 256 >gi|170736479|ref|YP_001777739.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia MC0-3] gi|169818667|gb|ACA93249.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia MC0-3] Length = 604 Score = 100 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 43/316 (13%), Positives = 88/316 (27%), Gaps = 48/316 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRT--------TSDYTLLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ G+ + + K +DAD++ L E+ Sbjct: 293 LRVASFNVLNYFNGNGLGGGFDDPNNRGAKTFQEFQRQEAKIVSALKAIDADVIGLMEIQ 352 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + + R + I A+ + V P+ A Sbjct: 353 NNGYGELSAVRQLAAKLGNHWRVVDPGTSRLGGDAIAVAMIYDSRKVE------PVGRAA 406 Query: 135 DSFSRAGNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLS 185 NR+ + + N + + V HLKS D+ + + Sbjct: 407 TLAIDDKNRQPLAQSFRLINGNKQALTVAVNHLKSKNCPDAANDDLDQGDGQGCWNPTRT 466 Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + A + DW+ ++ GDFN +T++ + + Sbjct: 467 RAAAKVADWLAGNPTGVKSQGVLLIGDFNSYTYEDPI-----RTLESRGYRNLVARWIGA 521 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--------------- 288 + +D+ + + I +E Sbjct: 522 NAYSYVYNGEAGYLDHALATLPLASHVKAVHEWHINADEPLALQYTLAYKSAEQQKTFYA 581 Query: 289 --GKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 582 ADAYRSSDHDPVLIDI 597 >gi|107027090|ref|YP_624601.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU 1054] gi|116691517|ref|YP_837050.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia HI2424] gi|105896464|gb|ABF79628.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU 1054] gi|116649517|gb|ABK10157.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia HI2424] Length = 604 Score = 100 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 43/316 (13%), Positives = 88/316 (27%), Gaps = 48/316 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRT--------TSDYTLLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ G+ + + K +DAD++ L E+ Sbjct: 293 LRVASFNVLNYFNGNGLGGGFDDPNNRGAKTFQEFQRQEAKIVSALKAIDADVIGLMEIQ 352 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + + R + I A+ + V P+ A Sbjct: 353 NNGYGELSAVRQLAAKLGNHWRVVDPGTSRLGGDAIAVAMIYDSRKVE------PVGRAA 406 Query: 135 DSFSRAGNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLS 185 NR+ + + N + + V HLKS D+ + + Sbjct: 407 TLAIDDKNRQPLAQSFRLVNGNKQALTVAVNHLKSKNCPDAANDDLDQGDGQGCWNPTRT 466 Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + A + DW+ ++ GDFN +T++ + + Sbjct: 467 RAAAKVADWLAGNPTGVKSQGVLLIGDFNSYTYEDPI-----RTLESRGYRNLVARWIGA 521 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--------------- 288 + +D+ + + I +E Sbjct: 522 NAYSYVYNGEAGYLDHALATLPLASHVKAVHEWHINADEPLALQYTLAYKSAEQQKTFYA 581 Query: 289 --GKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 582 ADAYRSSDHDPVLIDI 597 >gi|227819964|ref|YP_002823935.1| endonuclease/exonuclease/phosphatase family protein [Sinorhizobium fredii NGR234] gi|36958668|gb|AAQ87136.1| Dioxygenase [Sinorhizobium fredii NGR234] gi|227338963|gb|ACP23182.1| putative Endonuclease/Exonuclease/phosphatase family protein [Sinorhizobium fredii NGR234] Length = 264 Score = 100 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 36/285 (12%), Positives = 79/285 (27%), Gaps = 49/285 (17%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + +R +++N+++ + D + DI+ LQE+ A Sbjct: 2 PRPLRFLTYNVHSCFGTDR-----------KLDPARIAAVIGECRPDIIALQEVDVGRAR 50 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + + H D AV L ++ L + Sbjct: 51 SGGIDQAHMIATHLNMAAHFHP-ALHLKDERYGDAVLTALPMRLVKADVLPSSG------ 103 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQK 198 R A+ + +++ ++ V+ HL +QA L W+ Sbjct: 104 EPRGALWVEIDLADVRLQVIVTHLGLRGS-------------ERVRQATTLLGPGWLGGI 150 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + ++AGD N I + + K + + +D Sbjct: 151 GQGDSRVILAGDLNA-IARSAAYKLLAAHLKDAQL-----QLKAKPRPTFPSRLPLLRLD 204 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + + + SDH PI + + Sbjct: 205 HVFVGDGI----------NVGDCTVHSSALARVASDHLPILAELE 239 >gi|34498730|ref|NP_902945.1| sphingomyelinase/beta-hemolysin [Chromobacterium violaceum ATCC 12472] gi|34104581|gb|AAQ60939.1| probable sphingomyelinase/beta-hemolysin [Chromobacterium violaceum ATCC 12472] Length = 510 Score = 100 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 38/326 (11%), Positives = 83/326 (25%), Gaps = 36/326 (11%) Query: 1 MIRKYVLALVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 M L +P + A ++L +WN L +L+ N + + Sbjct: 1 MKAWRFLLCAALSLPAASHAADPEDLKLATWNAMLLP----QALYPNYGQMRRVELMAAA 56 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFY-------STERLINHSKRDSNNDIH 111 + D++ QE+ A K+ Y + + + Sbjct: 57 PILQAQ--DVLVFQELQDNAASDKLLALLKPRFPYQTPVIGRAQQGWDGTEGWNGMKPED 114 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 +A+ + V ++ Y S+ + + +NG+ V+ HL+S + Sbjct: 115 GGVAIASRWPIVEKRQYLFQTPGCSWDGQALKGFAYARIAVNGQFYHVIGTHLQS----E 170 Query: 172 SLENTYSPSCSLLSQQAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 + Q + + W+ + ++AGD N + Sbjct: 171 DSGCANHADIGVRQAQLREIAAWVQSRHLPVEETVIVAGDMNIDRYKSAEYRAMLDILQA 230 Query: 231 NDS--------LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL--------IQES 274 + + +DY + + + Sbjct: 231 GEPRYAGMPHSFDTAGNGIALERYGARGGDAPEYLDYILTLKGHRQPAAWHNQALDAPSP 290 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISI 300 SDH P+ Sbjct: 291 QWTAQSAVAKQTYAYADFSDHYPVQA 316 >gi|15676313|ref|NP_273448.1| exodeoxyribonuclease III [Neisseria meningitidis MC58] gi|134104765|pdb|2JC4|A Chain A, 3'-5' Exonuclease (Nexo) From Neisseria Meningitidis gi|7225621|gb|AAF40839.1| exodeoxyribonuclease III [Neisseria meningitidis MC58] gi|316984902|gb|EFV63858.1| exodeoxyribonuclease III [Neisseria meningitidis H44/76] gi|325134978|gb|EGC57610.1| exodeoxyribonuclease III [Neisseria meningitidis M13399] gi|325140915|gb|EGC63422.1| exodeoxyribonuclease III [Neisseria meningitidis CU385] gi|325199589|gb|ADY95044.1| exodeoxyribonuclease III [Neisseria meningitidis H44/76] Length = 256 Score = 100 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 88/305 (28%), Gaps = 73/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + DI+ LQE Sbjct: 1 MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ ++V + R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRSVPQDVHF-----GLPALPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V++++ + LDS + Y Q L +++ + Sbjct: 90 RVIAATVS----GVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRHG 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D +++ + + Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ L D +R SDH P++ Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDV-------RVDLETRALERPSDHAPVT 251 Query: 300 IDYDF 304 ++D+ Sbjct: 252 AEFDW 256 >gi|301307705|ref|ZP_07213662.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] gi|300834379|gb|EFK64992.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] Length = 280 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 91/316 (28%), Gaps = 49/316 (15%) Query: 2 IRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 +R ++ + C Q+ + + S+N+ +E + W + Sbjct: 1 MRNLIIVFISLFTFCIGISGQQKCKLNVGSFNLRYDNEGDKDDSWAHRKDMA-------V 53 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 D D+ +QE + V + T+ + H A+ +K Sbjct: 54 SLVHFHDFDVFGIQEGLIHQ-VKDLVKDGTYTFVGVGRDDGKEAGE------HAAVLFKK 106 Query: 119 KNVRVLQQSYPLLG-----AKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLD 171 ++L L + R ++ ++GK+ + +H F Sbjct: 107 DRFKLLDSGNYWLSETQDKPSFGWDAQCRRVCSWAKLKDKVSGKEFYFFSVH-----FDH 161 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--TID 229 + S ++ + + P + GDFN + +D Sbjct: 162 IGKVARHESALIMLANIKKIA--------GDSPAICVGDFNGTPDSEPIQILKSDGLLLD 213 Query: 230 PNDSLIRFPKEKDSRCNANK-NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + P N N K IDY + +N Y + Sbjct: 214 SREISKTPPYGTVGTTNQFNLNAPMKNRIDYIFVTKN---------IHVNKYGTLNEFQY 264 Query: 289 GKRLSDHCPISIDYDF 304 G SDH PI I+ +F Sbjct: 265 GHYPSDHFPIMIEAEF 280 >gi|331653152|ref|ZP_08354157.1| exodeoxyribonuclease III [Escherichia coli M718] gi|331049250|gb|EGI21322.1| exodeoxyribonuclease III [Escherichia coli M718] Length = 272 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 83/312 (26%), Gaps = 73/312 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++ VS+NIN L + L + D++ LQE Sbjct: 2 AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +FP + ++ H +A+ K + + Sbjct: 43 DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEE 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + + + V++ F + +Q Q L++++ + + Sbjct: 91 AQRRIIMADIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELK 145 Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239 P +I GD N L ++ + + + F Sbjct: 146 RENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRH 205 Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + Q + ++ D + Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258 Query: 291 RLSDHCPISIDY 302 + SDH P+ + Sbjct: 259 KPSDHAPVWATF 270 >gi|238786156|ref|ZP_04630108.1| Exodeoxyribonuclease III [Yersinia bercovieri ATCC 43970] gi|238712925|gb|EEQ04985.1| Exodeoxyribonuclease III [Yersinia bercovieri ATCC 43970] Length = 271 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 76/310 (24%), Gaps = 73/310 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ VS+NIN L + L + D++ LQE Sbjct: 3 TMKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDD 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 +FP + H +A+ K + + +D+ Sbjct: 44 MFP-------LEDVSQHGYHVFYHGQKGHYGVALLTKEKPLAVRRGFPTDEEDA-----Q 91 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 RR + + + V++ F + + L+ ++ Q+ + Sbjct: 92 RRIIMADIATPQGPLTVIN-----GYFPQGESRDHPIKFPAKERFYADLQQYLEQQHSAD 146 Query: 203 VPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 +I GD N L + + + F Sbjct: 147 SQLLIMGDINISPTDLDIGIGEENRKRWLRTGKCSFLPEERAWLAQLQNWGLVDTFRAAN 206 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID + I D ++ Sbjct: 207 PECNDQFSWFDYRSRGFDENRGLRIDLLLASHPLAARCIATGI-------DYEIRGMEKP 259 Query: 293 SDHCPISIDY 302 SDH P+ ++ Sbjct: 260 SDHAPVWSEF 269 >gi|78048060|ref|YP_364235.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325927483|ref|ZP_08188725.1| metal-dependent hydrolase [Xanthomonas perforans 91-118] gi|78036490|emb|CAJ24181.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325542146|gb|EGD13646.1| metal-dependent hydrolase [Xanthomonas perforans 91-118] Length = 298 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 56/290 (19%), Positives = 94/290 (32%), Gaps = 36/290 (12%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 V +A+ ++++ LV+ N++ E + + + K L D++ LQ Sbjct: 32 AVQSSATASREMTLVTLNLHHDRED------------WPARRAYIARELKRLAPDVIALQ 79 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ V + W S A+ + + L Sbjct: 80 EVIERRG--SVENQAAWLARKLGYDYTFASVDPVGAPKRYGNALLSRRKVLATHQRLLQP 137 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 D R A L V+++G+ + V HL E + + ++Q L Sbjct: 138 LDDY------RVAAHLQVDVDGQPVNVYVTHLN--------ERADARGAGIRTRQVADLL 183 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 D+I + P VIAGDFN + L D S+ R S N + R Sbjct: 184 DFIASN-SAQAPVVIAGDFNTAADTLDLQALRKGYGDSYGSVHRNSDATVSTLNMHIFDR 242 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ QN E Y + G+ SDH + + Sbjct: 243 -PARIDHVFFQQNRLLAREARILFEAPY------AEGRWASDHYGVWVRL 285 >gi|220907814|ref|YP_002483125.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7425] gi|219864425|gb|ACL44764.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7425] Length = 647 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 83/322 (25%), Gaps = 58/322 (18%) Query: 21 AQKVRLVSWNINTLSEQE-GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 A + + S+N+ L+ +K + R T+ + + DIV LQE+ + Sbjct: 331 AHHLTIASFNVENLNPGAAQSKDFKFTGNRITAIAEAIVSSLGS--PDIVGLQEVQDNSG 388 Query: 80 VAK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 T+ + L N +I A + V Sbjct: 389 PEDDGVVAADQTARLLVAAIAAAGGPTYQ-YIDIPPLNNQEGGQPGGNIRVAFLFNPQRV 447 Query: 122 RVLQQS--------------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 +++ P + + R+++ + V++ Sbjct: 448 QLMSGQAGRGDATTATTVLAGGGLSLSPGRIDPLNPAFRETRKSLVAQFRFREQDFVVIN 507 Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKI 215 H S L P S QA + ++ ++ GD N Sbjct: 508 NHWSSKRGDQPLYGPNQPPDLPSNQQRQTQAAIVHQFVQTLLSQNPATKVIVLGDLNDFG 567 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + P + + + + N +D+ ++ + Sbjct: 568 FSPPLETLKGQ---PPLLVNLAEQLPEVERYSYVFQGNAQELDHVLVSSALQPRAQFDIV 624 Query: 276 SEILYNEDDIKSRGKRLSDHCP 297 +LSDH P Sbjct: 625 H-------LNAEFHTQLSDHDP 639 >gi|33863562|ref|NP_895122.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9313] gi|33641011|emb|CAE21469.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9313] Length = 279 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 87/304 (28%), Gaps = 67/304 (22%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83 + +WN+N + ++ + K+ D++ LQE + +V Sbjct: 3 IATWNVN----------------SIRTRLDQVQAWLKDAQPDLLCLQETKVDDPLFPHEV 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + + + + +A+ + + G + A Sbjct: 47 FEAQGYQVHFH------------GQKAYNGVAIVSRQPLEDVRRG-FTGELPEDAEALQL 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ I +++ ++ + L S + Y + L ++ + + Sbjct: 94 GEQKRVISALVNNIRIVNAYVPNGSALKSEKYPYK------LEWLSCLNRYLCAQAKRDE 147 Query: 204 PFVIAGDFNRKINYLGNNDD-------FWKTIDP-------NDSLIRFPKEKDSRCNANK 249 P + GDFN + + ++ D L + + N Sbjct: 148 PLCLVGDFNIALEARDIHHPELLTGGIMASELEREALLKVLGDRLHDVFRVFEPDANHWS 207 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ + + ++ SDH P+S+ Sbjct: 208 WWDYRSGAWDRDQGWRIDHIYLCDELLSQARSCVIHKH-------LRGHEKPSDHAPVSV 260 Query: 301 DYDF 304 D ++ Sbjct: 261 DLNW 264 >gi|311745839|ref|ZP_07719624.1| endonuclease/exonuclease/phosphatase family protein [Algoriphagus sp. PR1] gi|311302431|gb|EAZ80320.2| endonuclease/exonuclease/phosphatase family protein [Algoriphagus sp. PR1] Length = 286 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 40/290 (13%), Positives = 77/290 (26%), Gaps = 34/290 (11%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 S AQ ++NI + + +LW + + + + +IV +QE Sbjct: 26 SQAQTHNFATFNIRYANNNDVGNLW-------ENRLPEVSKLIQFHQIEIVGIQEGLHDQ 78 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 V + + + + + P +K + Sbjct: 79 VV-GLSNSLGYSFIGVGRDDGTEKGEYAAILYNQDNFKLLDSGTFWLSPTPEKPSK-GWD 136 Query: 139 RAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 A NR + G ++ +IH + S L+ Q L Sbjct: 137 AALNRICTWGKFQDREGVTFFIFNIHY-----DHIGQQAREESSKLVMNQVAKLN----- 186 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWK-TIDPNDSLIRFPKEKDSRCNANKNLR--NK 254 P ++ GDFN + + + + P + Sbjct: 187 --PEGAPAIMMGDFNVTPDNPAYTTITSNPAWKDSRLISKIPSYGPKGTFTGFDWERMPD 244 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ + I + K SDH P+ ++ DF Sbjct: 245 GIIDHVFV---------YGPIEVIRHGILSDNYGKKYPSDHFPVLVELDF 285 >gi|209549080|ref|YP_002280997.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534836|gb|ACI54771.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 263 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 99/305 (32%), Gaps = 68/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + L Q+ K+ D DIV LQE+ + + + Sbjct: 1 MKIATWNING----------------VKARIDNLTQWLKDSDPDIVCLQEIKT---IDEG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + +A+ K D SR Sbjct: 42 FPRLE-------IEALGYHVETHGQKGFNGVAILSKTSPSEVNRGLPGDPLDEQSRF--- 91 Query: 144 RAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +E + + +I V I+L + +D+ + Y + + L+ + ++ Sbjct: 92 --LEAVFTLPDTRILRVCCIYLPNGNPVDTEKYPYKLA------WMERLRSFAAERLAYE 143 Query: 203 VPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 V+AGD+N +L + ++ ++ D+ Sbjct: 144 EMLVLAGDYNVIPEPHDCFDPKVWESDALFLPQTREAFRRLENLGLTDAVRATTDATQFY 203 Query: 248 NKNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + N I ID+ ++ A + + + + ++ SDH P+ Sbjct: 204 SFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIEKHV-------RAWEKPSDHVPVI 256 Query: 300 IDYDF 304 +DF Sbjct: 257 AYFDF 261 >gi|226355795|ref|YP_002785535.1| extracellular nuclease [Deinococcus deserti VCD115] gi|226317785|gb|ACO45781.1| putative extracellular nuclease, Endonuclease/Exonuclease/phosphatase family [Deinococcus deserti VCD115] Length = 865 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 90/315 (28%), Gaps = 44/315 (13%) Query: 21 AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN- 78 +++ N+ N + ++ T + + L+AD++ L E+ + Sbjct: 281 GGTLKVAGANVLNYFTTLGSAGRGASNSTEFTRQKAKIVAELRALNADVITLMEVENNGE 340 Query: 79 -AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A+ + + + K ++ I AI R V + G + Sbjct: 341 VALDDLVTALNAAAGKTEFASVKTGKVGTD-AIRMAIIYRPDRVETV------GGPQIDT 393 Query: 138 SRAGNRRAVELLVEINGKK--IWVLDIHLKS-FCFLDSLENTYSPSCS--LLSQQAQWLK 192 + +R V G K V+ H KS S + C L QA+ L Sbjct: 394 NAVHSRPPVAQTFRDLGGKGIFTVVANHFKSKGSCPASGDVDMGQGCWNLLRVDQAKALL 453 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 ++ + K ++ GD N KTI+ + + + Sbjct: 454 EFAGRLKAVDPDVLLMGDLNAYGEEDPI-----KTIEAAGFESLNKRIPAEDRYSYQFNG 508 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------------------- 289 +D+ + + + I +E + Sbjct: 509 EFGYLDHALSSSTLSAQVTGITEWHINSDEPVVLDYNIEFKKHPECTATNCTSPDLYAPT 568 Query: 290 -KRLSDHCPISIDYD 303 R SDH P+ + Sbjct: 569 PYRSSDHDPVLVGLT 583 >gi|154253458|ref|YP_001414282.1| exodeoxyribonuclease III Xth [Parvibaculum lavamentivorans DS-1] gi|154157408|gb|ABS64625.1| exodeoxyribonuclease III Xth [Parvibaculum lavamentivorans DS-1] Length = 261 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 92/303 (30%), Gaps = 67/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ S+N+N + T L + K + DIV LQE+ + Sbjct: 1 MKIASFNVN----------------SIKARLTNLTDWLKEAEPDIVCLQELKCIDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ + + +A+ K+ D +R Sbjct: 41 ------NFPHGPIEELGYNVAVNGQKTYNGVAILSKHPLEDVSRGLPGNDGDDHARY--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E +V NG + V I+L + +D+ + TY L D + Sbjct: 92 --IEAVVSANGSVVRVASIYLPNGNPVDTDKFTYK------LGWMDRLIDHARELLSYEE 143 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNANK 249 P V+AGD+N ++ D N L + + Sbjct: 144 PLVLAGDYNVIPTIDDVHNPAAWVNDALFRPETRAKFRELINLGLTDAFRACHREAHRYT 203 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A L + D ++ SDH PI + Sbjct: 204 FWDYQAGAWAKDNGIRIDHLLLSPQAADLLKAS-------DIDRAVRGREKPSDHVPIWV 256 Query: 301 DYD 303 + D Sbjct: 257 ELD 259 >gi|325578563|ref|ZP_08148663.1| exodeoxyribonuclease III [Haemophilus parainfluenzae ATCC 33392] gi|325159799|gb|EGC71929.1| exodeoxyribonuclease III [Haemophilus parainfluenzae ATCC 33392] Length = 267 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 85/311 (27%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + D++ LQE + + Sbjct: 1 MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEDFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +F+ H +A+ K + +D+ R Sbjct: 45 TITDNWGYHVFHH------------GQKGHYGVALLTKKEPKAVRRGFPTDNEDAQKR-- 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +E + V++ F + + L+ ++ Q + Sbjct: 91 ---IIMADLETPFGLLTVIN-----GYFPQGESRAHETKFPAKEKFYADLQRYLEQDHDK 142 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 P +I GD N L ++++ + F K Sbjct: 143 ANPVLIMGDMNISPTDLDIGIGDENRKRWLRTGKCSFLPEEREWYQRLYDYGLEDTFRKL 202 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + ID+ +++ + + ++ Sbjct: 203 NPTVNDKFSWFDYRSKGFDDNRGLRIDHILVNHQLAERCVDVGI-------ALDIRAMEK 255 Query: 292 LSDHCPISIDY 302 SDH PI ++ Sbjct: 256 PSDHAPIWAEF 266 >gi|332161914|ref|YP_004298491.1| exonuclease III [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318605567|emb|CBY27065.1| exodeoxyribonuclease III [Yersinia enterocolitica subsp. palearctica Y11] gi|325666144|gb|ADZ42788.1| exonuclease III [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859743|emb|CBX70078.1| exodeoxyribonuclease III [Yersinia enterocolitica W22703] Length = 268 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 79/309 (25%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + H +A+ KN + + +D+ R Sbjct: 42 FP-------LEEVSQHGYHVFYHGQKGHYGVALLTKNEPLAVRRGFPTDEEDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + + L+ ++ Q+ + Sbjct: 90 RIIMADIATPQGPLTVIN-----GYFPQGESRDHPIKFPAKERFYADLQQYLEQQLSADA 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 +I GD N L + + + + F Sbjct: 145 QVLIMGDLNISPTDLDIGIGEDSRKRWLRTGKCSFLPEERAWLERLQNWGLVDTFRAANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + I D ++ S Sbjct: 205 DCNDQFSWFDYRSRGFDENRGLRIDLLLASRPLAARCIATGI-------DYDIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ ++ Sbjct: 258 DHAPVWSEF 266 >gi|163801984|ref|ZP_02195880.1| putative phospholipase C precursor [Vibrio sp. AND4] gi|159174125|gb|EDP58933.1| putative phospholipase C precursor [Vibrio sp. AND4] Length = 442 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 41/289 (14%), Positives = 86/289 (29%), Gaps = 32/289 (11%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 Q + L+++NI L Y L+ Y K D+V LQE+ + A Sbjct: 176 QHLNLMTYNIWALPAVASHIDD---------RYELIPSYVKGF--DVVALQEVFADGREA 224 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + + +D I R V Q +P + D + Sbjct: 225 FLRELAKEYPYQTKMLDKD---GFNIHDGGVTIVSRYPIVNQAQYVFPDCSSADCLADK- 280 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + G+ + + H S S +Q + + + S Sbjct: 281 --GINYAEIIKGGQAYHIFNTHAAS-----SDTEIAREHRQRQFKQMRAMAQSLN--IPS 331 Query: 202 LVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDS-LIRFPKEKDSRC------NANKNLRN 253 V +GDFN + + + + + + + + Sbjct: 332 NETVVYSGDFNVNKLKFPDDYQQMIANLSAIEPEYSGYTESTFDPRINNFAGRTFSGDGS 391 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +DY ++ +++ ++ + + LSDH P+S Sbjct: 392 VEYLDYVMVSNEYGIKSQNDNYVDVPRSTAASIWQHYNLSDHFPVSTVL 440 >gi|317492293|ref|ZP_07950722.1| exodeoxyribonuclease III [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919632|gb|EFV40962.1| exodeoxyribonuclease III [Enterobacteriaceae bacterium 9_2_54FAA] Length = 269 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 84/309 (27%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +S+NIN L + L D++ LQE + Sbjct: 1 MKFISFNINGL----------------RARPHQLEAIIAKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + H +A+ K + + +D+ R Sbjct: 42 FP-------LADLEHLGYHIFYHGQKGHYGVALLTKEQPLAVRKGFPTDEEDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + ++ Q L++++ ++ Sbjct: 90 RIIMADIATPTGVLTVIN-----GYFPQGESRDHPIKFPAKTKFYQDLQNYLETEQTPAG 144 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ + + + + Sbjct: 145 QVIVMGDVNISPTDSDIGIGEENRKRWLRTGKCSFLPEEREWMDRLKNWGLIDTYRQANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 R + + ID + Q+ + I D ++ S Sbjct: 205 ERNDQFSWFDYRSKGFDENRGLRIDLVLASQSLAERCIDTGI-------DYEIRGMEKPS 257 Query: 294 DHCPISIDY 302 DH PI D+ Sbjct: 258 DHAPIWADF 266 >gi|297537413|ref|YP_003673182.1| exodeoxyribonuclease III Xth [Methylotenera sp. 301] gi|297256760|gb|ADI28605.1| exodeoxyribonuclease III Xth [Methylotenera sp. 301] Length = 260 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 92/305 (30%), Gaps = 72/305 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + +L +WN+N+L+ + + ++ D++ LQE ++ Sbjct: 3 SGTFKLATWNVNSLN----------------VRLQHVLDWLRDNPIDVLCLQETKQEDS- 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 Y+ + ++ S + +A+ + + Sbjct: 46 ---------KFPYTELKEAGYNAIHSGQKTYNGVAILS------THDMTEVEHGIADFED 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 G +R + + + V+ +++ + +DS + Y + L W+ + + Sbjct: 91 GQKRVISATIN----GVRVVCVYIVNGQAVDSEKYEYK------MRWLTALNTWLAGELK 140 Query: 201 SLVPFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKDSRCN 246 V+ GD+N +D + + L + + Sbjct: 141 KYPKLVVLGDYNIAPEDRDCHDPAAWLGQILVSPQEREHFQKLLQLGLHDSFRLFEQAEK 200 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ++ ID+ ++ I + D + +R SDH P Sbjct: 201 SFSWWDYRMMGFRRNFGMRIDHILVSDALKSACIAATI-------DKAPRKLERPSDHTP 253 Query: 298 ISIDY 302 + ++ Sbjct: 254 VILEL 258 >gi|296284849|ref|ZP_06862847.1| hypothetical protein CbatJ_14571 [Citromicrobium bathyomarinum JL354] Length = 257 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 39/302 (12%), Positives = 87/302 (28%), Gaps = 69/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NIN + L ++ + D+ LQE+ S + Sbjct: 1 MRIATFNING----------------IKARLPRLLEWLEETQPDVACLQEIKSQDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S I + +AV K +++ L +S + Sbjct: 41 ------GFPASEFEAIGYQALWHGQKSFNGVAVLAKQGLTMEERQRGLPGDESDDQ---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A L VE++G + + +++L + + Y + + L+ + Sbjct: 91 -ARYLEVEVDG--VVIANLYLPNGNPHPGPKFDYKLA------WMERLRARMAALWAQEK 141 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GDFN + D + + + + Sbjct: 142 PTIVLGDFNVIPQDKDVWSPPAMADDALMQPESRDAYARLLADGWTDAIDTLNPRGGVWT 201 Query: 248 NKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + ID+ ++ L D ++ SDH P+ + Sbjct: 202 FWDYQRGAWQRDHGFRIDHCLLSPELADRLQAAGV-------DKHARGREKASDHAPVWV 254 Query: 301 DY 302 + Sbjct: 255 EI 256 >gi|294340117|emb|CAZ88488.1| putative exodeoxyribonuclease III [Thiomonas sp. 3As] Length = 253 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 81/301 (26%), Gaps = 74/301 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+LS + + + D++ LQE + Sbjct: 1 MKIATWNVNSLS----------------VRLPQVLDWLQAQSPDVLALQETKLTDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + + +A+ + Q G Sbjct: 41 ------RFPHAELLNAGYHSVCLGQPTYNGVALLSRREAAEVQR----------GIPGFE 84 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A ++ + V+ + + DS + Y + L+ W+ + + Sbjct: 85 DAQARVIAATFGDLRVIGAYFPNGQAPDSDKFAYK------MRWLDALQAWVAAELQRYA 138 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 + GDFN D +K + + F + D + Sbjct: 139 KVALMGDFNIAPEDRDVFDPVAWAGQIHCTPEERGHFKALLGLGLIDAF-RAFDQPPKSW 197 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ + L D + +R SDH P+ Sbjct: 198 SWWDYRNLAFRKNQGLRIDHILVSEGLRDSLQSCVI-------DKAPRKNERPSDHAPVI 250 Query: 300 I 300 Sbjct: 251 A 251 >gi|251779644|ref|ZP_04822564.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083959|gb|EES49849.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 258 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/291 (15%), Positives = 93/291 (31%), Gaps = 46/291 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+ + + R L+ + DI+ QE Sbjct: 1 MKVMTFNLRCDF-------FLDFNNRWDERKKLVFDVINKYNCDIIGTQEATKKMFKDIS 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA--- 140 T+ I + S I + KK+ + +++ L + + R+ Sbjct: 54 DNIETFNIIGNPRSKKLFS-------ERNDILISKKHSIIENKTFWLHDNPEKYGRSRWY 106 Query: 141 --GNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT- 196 R +VE+ N K+I + + HL + + + L ++I Sbjct: 107 SMFPRICTTAIVELENSKRIRICNSHLDFLLP------------QARAYELKKLSEFIKK 154 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK----EKDSRCNANKNLR 252 ++++ +P +I GDFN N + + + K + KN Sbjct: 155 EQEKEELPLIIMGDFNSNPNSKLIKEFINGDVFNKRLVAVQDKKKELYNKATMGNFKNKE 214 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY + + F I GK SDH P+ + Sbjct: 215 KGSHIDYIFVSEE---------FEIIDVEIVKYNVNGKYPSDHYPLMAEIS 256 >gi|270262158|ref|ZP_06190430.1| exodeoxyribonuclease III [Serratia odorifera 4Rx13] gi|270044034|gb|EFA17126.1| exodeoxyribonuclease III [Serratia odorifera 4Rx13] Length = 268 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 80/310 (25%), Gaps = 73/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLSAIIEQHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + H +A+ K+ + + D+ R Sbjct: 42 FP-------LEEVSQHGYHVFYHGQKGHYGVALLTKDEPIAVRRGFPTDDDDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + S+ Q L++++ Q+ Sbjct: 90 RIIMADLATPQGTLTVIN-----GYFPQGESRDHPTKFPAKSRFYQDLQNYLEQQLSVES 144 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 P ++ GD N + ++ + + + Sbjct: 145 PVLVMGDVNISPSDYDIGIGEESRKRWLRTGKCSFLPEEREWMDRLLNWGLVDTYRHANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 R + + ID + D ++ S Sbjct: 205 GRNDEFSWFDYRSRGFDENRGLRIDLLLASTPLAARCTATGI-------DYQIRGMEKPS 257 Query: 294 DHCPISIDYD 303 DH P+ ++ Sbjct: 258 DHAPVWAEFS 267 >gi|207742979|ref|YP_002259371.1| exodeoxyribonuclease III protein [Ralstonia solanacearum IPO1609] gi|206594376|emb|CAQ61303.1| exodeoxyribonuclease III protein [Ralstonia solanacearum IPO1609] Length = 269 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 97/303 (32%), Gaps = 61/303 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+L + + + +D T + D++ LQE+ + + Sbjct: 1 MRVATWNVNSL--KVRLPHVLQWLGEREADATPI---------DLLCLQELKLPDDRYPL 49 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + + +A+ + + + ++ F+ R Sbjct: 50 AELDA----------AGYASLFTGQKTYNGVAILARKA-AMPEGRDVIKNIPGFADEQQR 98 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V ++ G + V+ + + LDS + Y + L+DW+ + ++ Sbjct: 99 -IVAATYDVAGGPVRVISAYFPNGQALDSDKMVYK------MRWLAALQDWLKTEMDAHP 151 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GDFN + ++ ++ + F + + Sbjct: 152 RLMLLGDFNIAPDDRDVHDPKKWEGMNLVSPEERAAFRALESAGLVDAFRMFEQAD-KLF 210 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID+ ++ + D + ++ SDH P+ Sbjct: 211 SWWDYRLFAFKRNAGLRIDHILLSPELAQRCESCHI-------DRVPRGWEQPSDHTPVV 263 Query: 300 IDY 302 Sbjct: 264 AAL 266 >gi|254672519|emb|CBA06061.1| exodeoxyribonuclease III [Neisseria meningitidis alpha275] gi|254673406|emb|CBA08729.1| exodeoxyribonuclease III [Neisseria meningitidis alpha275] gi|308388602|gb|ADO30922.1| exodeoxyribonuclease III [Neisseria meningitidis alpha710] gi|325130865|gb|EGC53597.1| exodeoxyribonuclease III [Neisseria meningitidis OX99.30304] gi|325136967|gb|EGC59564.1| exodeoxyribonuclease III [Neisseria meningitidis M0579] gi|325202788|gb|ADY98242.1| exodeoxyribonuclease III [Neisseria meningitidis M01-240149] gi|325208783|gb|ADZ04235.1| exodeoxyribonuclease III [Neisseria meningitidis NZ-05/33] Length = 256 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 87/305 (28%), Gaps = 73/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + DI+ LQE Sbjct: 1 MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ +N + R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVH-----IGLPALPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V++++ + LDS + Y Q L +++ + Sbjct: 90 RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRYG 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D ++K + + Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWFKNLLDLGLTDSLRQVHPEGAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ L D +R SDH P++ Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDV-------RVDLETRALERPSDHAPVT 251 Query: 300 IDYDF 304 ++D+ Sbjct: 252 AEFDW 256 >gi|150008704|ref|YP_001303447.1| hypothetical protein BDI_2094 [Parabacteroides distasonis ATCC 8503] gi|255014502|ref|ZP_05286628.1| hypothetical protein B2_11369 [Bacteroides sp. 2_1_7] gi|256841263|ref|ZP_05546770.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|149937128|gb|ABR43825.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] gi|256737106|gb|EEU50433.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 348 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 38/350 (10%), Positives = 98/350 (28%), Gaps = 59/350 (16%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRT 50 ++ ++ L+FF P + A +++++N+ + + + R Sbjct: 1 MKIFMFFLLFFASPPLFAQA-TFKVMTYNVENFFDTRDNPTKNDDEFLPSGNRYWTQSRY 59 Query: 51 TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 + + ++ L E+ + + ++ + + + Sbjct: 60 YHKLQQIAKVISAAGEWSTPALIALCEVENDSVLSHLTRRTPLRWQDYRYIITQSP---D 116 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLK 165 I+ A+ ++ L+ + + R + + + I G + V H Sbjct: 117 PRGINVALLYQRDQFFYLRHESIPIRFSGNKH-KLTRDILHVYGKIITGDTLDVFVCHFP 175 Query: 166 SFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 S + + L + L +I GDFN ++ F Sbjct: 176 SRYGGEKESEKDRFDAARTLRGSSDSLL-----LIREKPQILIMGDFNDTPQDRSISEIF 230 Query: 225 WKTIDPN----------DSLIRFPKEKDSRC-NANKNLRNKIPIDYFVMDQNAYKF---- 269 P F ++ ++K +D +++++ Sbjct: 231 AAQAFPENTQITDSTSCTYYNLFASPHITQFPGSHKYQGEWSQLDQIIVNRDLITQESSM 290 Query: 270 -LIQESFS----------------EILYNEDDIKSRGKRLSDHCPISIDY 302 +I ES + SDH P+++D+ Sbjct: 291 HIIPESIHIFAPDFLLTKDKTWRGVRPFRTYYGFKYEGGFSDHLPLTVDF 340 >gi|121593299|ref|YP_985195.1| endonuclease/exonuclease/phosphatase [Acidovorax sp. JS42] gi|222110021|ref|YP_002552285.1| endonuclease/exonuclease/phosphatase [Acidovorax ebreus TPSY] gi|120605379|gb|ABM41119.1| Endonuclease/exonuclease/phosphatase [Acidovorax sp. JS42] gi|221729465|gb|ACM32285.1| Endonuclease/exonuclease/phosphatase [Acidovorax ebreus TPSY] Length = 255 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 86/292 (29%), Gaps = 53/292 (18%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 A + +R+ ++NI+ + + L + LDADIV LQE+ Sbjct: 9 PAEHSGILRVATYNIH--------KGVQGLGPARRLEIHNLGLAVEQLDADIVCLQEVRR 60 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSN------NDIHTAIAVRKKNVRVLQQSYPL 130 N + W E L A+ + + Q Sbjct: 61 MN-RKEASYFERWPHVPQAEYLAPEGYEAIYRTNAFTRHGEHGNALLTRWPVIGHQH--- 116 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 S R R + + VEI G+++ + +HL +Q Sbjct: 117 --EDISDHRFEQRGLLHVEVEIQGRRVHAIVVHLGLVPGS-------------RIRQVAQ 161 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 L+ +I ++ P V+AGDFN D + F + + Sbjct: 162 LQRFIAREVPEDAPLVVAGDFN---------DWGLQIKRMLAGFGLFEYDDAPQAFTYPA 212 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D+ + L R+SDH P+ ++ Sbjct: 213 RLPMVQLDHVYVRG-----LTPLGLQVPRGRI------WWRMSDHLPLIAEF 253 >gi|262382996|ref|ZP_06076133.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262295874|gb|EEY83805.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 280 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 91/316 (28%), Gaps = 49/316 (15%) Query: 2 IRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 +R ++ + C Q+ + + S+N+ +E + W + Sbjct: 1 MRNLIIVFISLFTFCIGISGQQKCKLNVGSFNLRYDNEGDKDDSWVHRKDMA-------V 53 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 D D+ +QE + V + T+ + H A+ +K Sbjct: 54 SLVHFHDFDVFGIQEGLIHQ-VKDLVKDGTYTFVGVGRDDGKEAGE------HAAVLFKK 106 Query: 119 KNVRVLQQSYPLLG-----AKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLD 171 ++L L + R ++ ++GK+ + +H F Sbjct: 107 DRFKLLDSGNYWLSETQDKPSFGWDAQCRRVCSWAKLKDKVSGKEFYFFSVH-----FDH 161 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--TID 229 + S ++ + + P + GDFN + +D Sbjct: 162 IGKVARHESALIMLANIKKIA--------GDSPAICVGDFNGTPDSEPIQILKSDGLLLD 213 Query: 230 PNDSLIRFPKEKDSRCNANK-NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + P N N K IDY + +N Y + Sbjct: 214 SREISKTPPYGTVGTTNQFNLNAPMKNRIDYIFVTKN---------IHVNKYGTLNEFQY 264 Query: 289 GKRLSDHCPISIDYDF 304 G SDH PI I+ +F Sbjct: 265 GHYPSDHFPIMIEAEF 280 >gi|307325998|ref|ZP_07605196.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger Tu 4113] gi|306888220|gb|EFN19208.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger Tu 4113] Length = 608 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 38/324 (11%), Positives = 80/324 (24%), Gaps = 71/324 (21%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYN 78 A ++ + ++N+ LS + S + L DIV L+E+ N Sbjct: 302 ADELSIATYNVENLSPKT-----------AQSKFDRLATGLVEHLASPDIVALEEVQDDN 350 Query: 79 AVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 K ++ + + +I A + Sbjct: 351 GATNDSVVGADATLTKLTDAIKAAGGPSYEW-RQINPVDDQDGGQPGGNIRVAFLYNPER 409 Query: 121 VRVLQ---------------------QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 V + P + +R+ + G+ ++V Sbjct: 410 VSFTDIPGGDSTTPVTVEKKGGKAALSASPGRIDPANGVWKDSRKPLVGQFSFRGRPVFV 469 Query: 160 LDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNR 213 + H S L++ + P S + + QA+ + ++ + V+AGD N Sbjct: 470 VANHFNSKGGDQGLDSRFQPPARSSETQRTGQAKTVNTFVKTLLNADPKAAVVVAGDLND 529 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273 + N +D+ + + Sbjct: 530 YQFSP----ALADLTKGGVLTDLVTRLPRDERYGYVYNGNSQVLDHILTSRALR------ 579 Query: 274 SFSEILYNEDDIKSRGKRLSDHCP 297 + SDH P Sbjct: 580 --RADYDIVHINAEFADQSSDHDP 601 >gi|229816298|ref|ZP_04446607.1| hypothetical protein COLINT_03350 [Collinsella intestinalis DSM 13280] gi|229808149|gb|EEP43942.1| hypothetical protein COLINT_03350 [Collinsella intestinalis DSM 13280] Length = 280 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 86/313 (27%), Gaps = 65/313 (20%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + ++ ++L SWN+N L LDADI+ LQE Sbjct: 4 TASRALKLASWNVNGLRAVLKKDPSF-------------TDIVAELDADILGLQETKLQE 50 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 ++ + +S +S ++ + +L A + Sbjct: 51 GQVEL-DLPGYHQVWSYAERKGYSGTAVFCREE---------PLSVRHADAVLAAGRAAG 100 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS---PSCSLLSQQAQWLKDWI 195 + + + + G+ V + + F F+D S + ++ Sbjct: 101 LSDDELELVAVAATEGR---VCALEFERFWFVDVYTPNAQGELARLSTRMAWDDAYRAFL 157 Query: 196 TQKKES-LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPK 239 ++ P V GDFN N + + F Sbjct: 158 RSLEDETGKPVVTCGDFNVAHNEIDLKNPKSNRGNAGFSDEERAKFGELLDAGYTDTFRA 217 Query: 240 EKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + A + IDYF++ + ++ Sbjct: 218 ANPNLEGAYSWWSYRFNARKNNAGWRIDYFLVSDAIADRVRACGIRNDIF---------- 267 Query: 291 RLSDHCPISIDYD 303 SDHCP++++ + Sbjct: 268 -GSDHCPVTLEIE 279 >gi|124022407|ref|YP_001016714.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9303] gi|123962693|gb|ABM77449.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9303] Length = 279 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 89/304 (29%), Gaps = 67/304 (22%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83 + +WN+N + ++ + ++ D++ LQE + +V Sbjct: 3 IATWNVN----------------SIRTRLDQVQAWLQDAQPDLLCLQETKVDDPLFPHEV 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + + + + +A+ + + G + A Sbjct: 47 FEAQGYQVHFH------------GQKAYNGVAIVSRQPLEDVRRG-FTGELPEDAEALQL 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ I ++++++ + L S + Y + L +++ + + Sbjct: 94 GEQKRVISALVNNIRIVNVYVPNGSALKSEKYPYK------LEWLSCLNRYLSAQAKRDE 147 Query: 204 PFVIAGDFNRKINYLGNNDD-------FWKTIDP-------NDSLIRFPKEKDSRCNANK 249 P + GDFN + + ++ D L + + N Sbjct: 148 PLCLVGDFNIALEARDIHHPERLTGGIMASELEREALLKVLGDRLHDVFRVFEPDANHWS 207 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ + + ++ SDH P+++ Sbjct: 208 WWDYRSGAWDRDQGWRIDHIYLCDELLSQARSCVIHKH-------LRGHEKPSDHAPVTV 260 Query: 301 DYDF 304 D ++ Sbjct: 261 DLNW 264 >gi|115524629|ref|YP_781540.1| exodeoxyribonuclease III [Rhodopseudomonas palustris BisA53] gi|115518576|gb|ABJ06560.1| Exodeoxyribonuclease III [Rhodopseudomonas palustris BisA53] Length = 263 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 88/304 (28%), Gaps = 69/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N L + + DIV LQE+ + Sbjct: 1 MRIATWNVN----------------SVRQRLDHLLTWLNDCSPDIVCLQEIKCVDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ +A+ K+ +D +R Sbjct: 42 -------FPREPIEALGYNVVTHGQKTFNGVALLSKHPLDEATPRLAGDEEDVHARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E +V + + V ++L + +D+ + Y + Q L D+ ++ + Sbjct: 92 --LEGVVSLKHGVVRVACLYLPNGNPVDTEKYPYK------LKWMQRLFDYTKERLRTEE 143 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 P ++AGDFN + ++ + D+ Sbjct: 144 PLILAGDFNVIPAPADVYNALAWVDDALFKPQTRESFQALLGLGLTDALRASTDA-AGQY 202 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ A L D ++ SDH P+ Sbjct: 203 TFWDYQAGAWQKNWGIRIDHLLLSPQAADRLTGVGI-------DRHVRSWEKPSDHVPVW 255 Query: 300 IDYD 303 D+D Sbjct: 256 ADFD 259 >gi|331673295|ref|ZP_08374063.1| exodeoxyribonuclease III [Escherichia coli TA280] gi|331069493|gb|EGI40880.1| exodeoxyribonuclease III [Escherichia coli TA280] Length = 272 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 83/312 (26%), Gaps = 73/312 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++ VS+NIN L + L + D++ LQE Sbjct: 2 AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +FP + ++ H +A+ K + + Sbjct: 43 DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPITVRR-----GFPGDDEE 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + + + V++ F + +Q Q L++++ + + Sbjct: 91 AQRRIIMAEIPSTLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELK 145 Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239 P +I GD N L ++ + + + F Sbjct: 146 RENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRH 205 Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + Q + ++ D + Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258 Query: 291 RLSDHCPISIDY 302 + SDH P+ + Sbjct: 259 KPSDHAPVWATF 270 >gi|253989463|ref|YP_003040819.1| exonuclease III [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780913|emb|CAQ84075.1| exodeoxyribonuclease iii (exonuclease iii) (exo iii) (ap endonucleas vi) [Photorhabdus asymbiotica] Length = 268 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 78/311 (25%), Gaps = 75/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +S+NIN L + L + D++ LQE ++ + Sbjct: 1 MKFISFNINGL----------------RARPHQLAAIVELHQPDVIGLQETKVHDEL--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ + + +DS R Sbjct: 42 -------FPLEEVNKLGYHVFYYGQKAHYGVALLTRQAPIAVHRGFPGDDEDS-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + +E + V++ F + + Q L+ ++ Q Sbjct: 90 RIIMADLETPHGLLTVIN-----GYFPQGESRDHPVKFPAKEKFYQDLQSYLEQNLSPQS 144 Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 +I GD N D + + + F Sbjct: 145 QVLIMGDMNISPTDLDIGIGDNNQKRWLKTGKCSFLPEERDWMDR-LKDWGLVDTFRHLN 203 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID + + I D ++ Sbjct: 204 PECNDQFSWFDYRSKGFDDNRGLRIDLLFASKPLAERCIATGI-------DYKIREMEKP 256 Query: 293 SDHCPISIDYD 303 SDH P+ +++ Sbjct: 257 SDHAPVWAEFE 267 >gi|254249188|ref|ZP_04942508.1| hypothetical protein BCPG_04048 [Burkholderia cenocepacia PC184] gi|124875689|gb|EAY65679.1| hypothetical protein BCPG_04048 [Burkholderia cenocepacia PC184] Length = 604 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 43/316 (13%), Positives = 88/316 (27%), Gaps = 48/316 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRT--------TSDYTLLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ G+ + + K +DAD++ L E+ Sbjct: 293 LRVASFNVLNYFNGNGLGGGFDDPNNRGAKTFQEFQRQEAKIVSALKAIDADVIGLMEIQ 352 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + + R + I A+ + V P+ A Sbjct: 353 NNGYGELSAVRQLAAKLGNHWRVVDPGTSRLGGDAIAVAMIYDSRKVE------PVGRAA 406 Query: 135 DSFSRAGNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLS 185 NR+ + + N + + V HLKS D+ + + Sbjct: 407 TLAIDDKNRQPLAQSFRLINGNKQALTVAVNHLKSKNCPDAANDDLDQGDGQGCWNPTRT 466 Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + A + DW+ ++ GDFN +T++ + + Sbjct: 467 RAATKVADWLAGNPTGVKSQGVLLIGDFNSYTYEDPI-----RTLESRGYSNLVARWIGA 521 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--------------- 288 + +D+ + + I +E Sbjct: 522 NAYSYVYNGEAGYLDHALATLPLASHVKAVHEWHINADEPLALQYTLAYKSAEQQKTFYA 581 Query: 289 --GKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 582 ADAYRSSDHDPVLIDI 597 >gi|108756804|ref|YP_634791.1| putative lipoprotein [Myxococcus xanthus DK 1622] gi|108460684|gb|ABF85869.1| putative lipoprotein [Myxococcus xanthus DK 1622] Length = 686 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 92/295 (31%), Gaps = 32/295 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + + +WNI + + + D L E+ S + Sbjct: 226 PLSVGNWNIEWFGDPLNGPNDELLQLTNAQ------AVIADAGVDFWGLAEIVSTAQFNE 279 Query: 83 V-FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + F + + S S N+ + + V+VL+ L + Sbjct: 280 LKARLPGYDGFLADDSSRVSSGTSDYSANEQKVGVLFKSDVVQVLRADVVLGNHE---YD 336 Query: 140 AGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 G R + + + I G + V + + F E S S W+KD++ Sbjct: 337 FGGRPPLRVDLRIQRGGASVDVTALVIHMKAFAGPDEYARRLSASG------WIKDYVDL 390 Query: 198 KKESLVPFVIAGDFNRK--------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + + V+ GD+N + D ++ + + RF + S Sbjct: 391 RLPTQRAMVV-GDWNDDVDVSIATNPSTGVKYDTPYRNFVSDSANYRFTTQALSEAGIGS 449 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + ID+ ++ + + S I + + SDH PI ++F Sbjct: 450 TVSRSTFIDHQLVTNELWASYVPNSTQVIRPSITGYRDNT---SDHYPIISRFNF 501 >gi|217969785|ref|YP_002355019.1| endonuclease/exonuclease/phosphatase [Thauera sp. MZ1T] gi|217507112|gb|ACK54123.1| Endonuclease/exonuclease/phosphatase [Thauera sp. MZ1T] Length = 301 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 77/311 (24%), Gaps = 55/311 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEM-GSYNAVA 81 +RL+SWNI +G D R+ + D++ LQE+ ++ +A Sbjct: 12 IRLLSWNIQWGRGADG-----------RVDLARTREAIRAAGPLDLICLQEVASNFPGLA 60 Query: 82 KVFPKNTWCIFYSTERLINHSKRDS-------NNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 ++ F + + + L Sbjct: 61 GGAREDEPAFFAEACADFEPVFGAGMDVPDGDGGRARFGNLLLSRLPVGQVFRHLLPSPA 120 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL-------ENTYSPSCSLLSQQ 187 D A R VE +VE + V+ HL+ + + Sbjct: 121 DPACPAMQRVCVEAVVEAPWGPLRVMSTHLEYYSARQRRAQVEALRALQAQAADLARLPA 180 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN- 246 A + + V+ GDFN + + + ++ + Sbjct: 181 AGKESNPAFAARPRPASAVLCGDFNCEPGSA-EYLALQRPLPASELAPDAERPHWVDAWA 239 Query: 247 ---------------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + D+F + + + Sbjct: 240 VAHGARAHAPSVGLHGAEWPDRSYCCDFFFVTADLAPRVRAVEVL-----------ADTA 288 Query: 292 LSDHCPISIDY 302 SDH P+ ++ Sbjct: 289 ASDHQPVVLEL 299 >gi|301156424|emb|CBW15895.1| exonuclease III [Haemophilus parainfluenzae T3T1] Length = 267 Score = 99.6 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 87/311 (27%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + D++ LQE + + Sbjct: 1 MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEDFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +F+ H +A+ K + +D+ R Sbjct: 45 TITENLGYHVFHH------------GQKGHYGVALLTKQEPKAVRRGFPTDNEDAQKR-- 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +E + V++ F + + L+ ++ Q + Sbjct: 91 ---IIMADLETPFGLLTVIN-----GYFPQGESRAHETKFPAKEKFYADLQRYLEQDHDK 142 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 P +I GD N + L ++++ + F K Sbjct: 143 ANPVLIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEEREWYQRLYDYGLEDTFRKL 202 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + ID+ ++++ + + ++ Sbjct: 203 NPTVNDKFSWFDYRSKGFDDNRGLRIDHILVNRQLAERCVDVGI-------ALDIRAMEK 255 Query: 292 LSDHCPISIDY 302 SDH PI ++ Sbjct: 256 PSDHAPIWAEF 266 >gi|32472920|ref|NP_865914.1| hypothetical protein RB4127 [Rhodopirellula baltica SH 1] gi|32444157|emb|CAD73600.1| probable secreted protein [Rhodopirellula baltica SH 1] Length = 279 Score = 99.6 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 92/309 (29%), Gaps = 54/309 (17%) Query: 1 MIRK----YVLALVFFLVPCTASVAQKV--RLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54 M++ ++ LV F A+ V R++ +NI+ + D Sbjct: 16 MMKGCGLVWLAGLVMFFGTGVLRAAEPVQVRVLCYNIHHGEGLDR-----------KLDL 64 Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 + + ++++ D+V LQE+ + + + + + H Sbjct: 65 ERIAKVIQSVEPDLVTLQEVDQNASRSGSVDQPAELARLTGMLVAF-GPNIPLQGGHYGN 123 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 AV K ++ L F R + + I+G+ +L + Sbjct: 124 AVLSKYPIANHRNELLPN----FDNGEQRGVLSAELTISGRNQPLLLLATHL-------- 171 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 A+ + ++ + P ++AGD N +N ++ Sbjct: 172 -DSRRDDRERLASAKAINQIVS--ESPRRPALLAGDMNDVLNSP----------TLDELE 218 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + + + + ID+ + + LI+ + SD Sbjct: 219 TMWTRVNEQVMPTTPVANPRRQIDFILFRPSNSWKLIEVKVLDEAV-----------ASD 267 Query: 295 HCPISIDYD 303 H PI + Sbjct: 268 HRPIFAVLE 276 >gi|89069565|ref|ZP_01156909.1| extracellular nuclease [Oceanicola granulosus HTCC2516] gi|89044900|gb|EAR50990.1| extracellular nuclease [Oceanicola granulosus HTCC2516] Length = 1049 Score = 99.6 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 94/341 (27%), Gaps = 53/341 (15%) Query: 16 CTASVAQKVRLVSWNINTLSE--QEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDA 66 A V V++ S+N+ +G S R + + LDA Sbjct: 535 APADVGGDVKVASFNVLNYFTTLDDGSSTVNGQDPRGANSEAELARQTSKIVAALDALDA 594 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D+V L E+ + + A + + I A + +++ Sbjct: 595 DVVGLIEIENDDGAATDALVAALNAVSDRTYAAVDTGVIGTDAIKVAFIYDTETMKIADG 654 Query: 127 SYPLLGAKDSF-----SRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENT--- 176 + + D+F + NR A+ + E G++ ++ HLKS + Sbjct: 655 TSAAILDTDAFVAPLETGPKNRPALAVTFEEKATGEQFTAVNNHLKSKGSPVDGDPNLDD 714 Query: 177 -YSPSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNND----DFWKTID 229 A L W+ S +I GD N ++ Sbjct: 715 GQGNGALTRKMAADELVKWLATNPTGTSDADQLILGDLNAYAKEDPIDEIKAGADDMIGT 774 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 +D + + +DY + +Q + + + I +E S Sbjct: 775 ADDFTDLATSFLGEEAYSYRFSGQWGTLDYALANQPLLESVTGVTEWHINSDEPSYLSYN 834 Query: 290 KRL---------------------------SDHCPISIDYD 303 + SDH PI + D Sbjct: 835 DNVLDPEERSFQVVPDPQEALFDADSPFASSDHDPILVGLD 875 >gi|161870674|ref|YP_001599847.1| exodeoxyribonuclease III [Neisseria meningitidis 053442] gi|161596227|gb|ABX73887.1| exodeoxyribonuclease III [Neisseria meningitidis 053442] gi|319411070|emb|CBY91471.1| exodeoxyribonuclease III (exonuclease III; EXO III) [Neisseria meningitidis WUE 2594] Length = 256 Score = 99.6 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 87/305 (28%), Gaps = 73/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + DI+ LQE Sbjct: 1 MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ +N + R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVH-----IGLPALPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V++++ + LDS + Y Q L +++ + Sbjct: 90 RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRYG 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D +++ + + Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ L D +R SDH P++ Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDV-------RVDLETRALERPSDHAPVT 251 Query: 300 IDYDF 304 ++D+ Sbjct: 252 AEFDW 256 >gi|311747824|ref|ZP_07721609.1| putative endonuclease/exonuclease/phosphatase family protein [Algoriphagus sp. PR1] gi|126575815|gb|EAZ80125.1| putative endonuclease/exonuclease/phosphatase family protein [Algoriphagus sp. PR1] Length = 278 Score = 99.6 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 79/294 (26%), Gaps = 46/294 (15%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 + + ++++NI ++ R TS+ + D+V + Sbjct: 29 ITIALAQKDTNTITVLTYNIYHG---------EDPANRGTSNLDEIAALILQYSPDVVAM 79 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 QE+ S + +L +S + A + + V ++ Sbjct: 80 QEVDSMTTRTAGVYGKKVDLVQELAKLTGYSGYF-AKAMDYAEGGYGEGLLVKGEAIFST 138 Query: 132 GAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 R A ++ N KKI + H Q + Sbjct: 139 QNLPIPHGGEPRAAAWAEFKLSNDKKIAIAGTHFCH------------EFEENRIAQVKE 186 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + Q S +P + AGD N + + D + S + Sbjct: 187 ISKVAGQ---SNLPVIWAGDLNLRPDSEAYRSIIGTWKDAGSDPTPY-----SPTFGSLK 238 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY D + ES+ + SDH P+ + F Sbjct: 239 DGP--RIDYVWFDPS---KFTLESYQVL----------DVPFSDHYPVLVTLKF 277 >gi|134300632|ref|YP_001114128.1| endonuclease/exonuclease/phosphatase [Desulfotomaculum reducens MI-1] gi|134053332|gb|ABO51303.1| Endonuclease/exonuclease/phosphatase [Desulfotomaculum reducens MI-1] Length = 244 Score = 99.6 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 34/280 (12%), Positives = 76/280 (27%), Gaps = 56/280 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++VS+NI +G + + A ++ LQE+ + + Sbjct: 3 QIKVVSYNIRHAQGMDGTI-----------HIQRIAASLAHTKAQLIGLQEVDKHMPRSH 51 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + D + A+ +L + Y L + Sbjct: 52 FIHQAKTLGQLLNMHWVYGPNLDWGVAQY-GNAILSYWPVLLYRQYMLPS------KGEQ 104 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R +E ++++ K+ HL + Q + + + I + Sbjct: 105 RGLLEAVLQLKHSKVSFFCTHLGLNQ-------------EERAAQVKEILNIIKKCC--- 148 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 P ++ GDFN + + + + + IDY + Sbjct: 149 YPCILVGDFNDGPTS-KEHRLLTTILKDA-------VGIQGSIKTFPSHKPQEQIDYIFV 200 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + SDH P+ I Sbjct: 201 SPE--------------WKILSASTYTTLASDHLPVQITL 226 >gi|241663220|ref|YP_002981580.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12D] gi|240865247|gb|ACS62908.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12D] Length = 269 Score = 99.6 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 89/304 (29%), Gaps = 63/304 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAK 82 +R+ +WN+N+L R L + + D++ LQE+ + Sbjct: 1 MRVATWNVNSL------------KVRLPHVLQWLAEREADATPIDLLCLQELKLPDDRYP 48 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + ++ + + +A+ + V + + Sbjct: 49 LAELDA----------AGYTSLFTGQKTYNGVAILSRKASVPEGRDVVKNIPGFTDDQQR 98 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V +++G + V+ ++ + LDS + Y + + L+ W+T + + Sbjct: 99 --IVAATYDVDGGPVRVISAYIPNGQALDSDKFVYK------LRWLEALQAWLTSEMAAN 150 Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GDFN ++ + + F + Sbjct: 151 PRLMLLGDFNIAPEDRDVHDPKKWEGQNLVSPEERAAFRAMQAAGLVDAFRMFEQED-KL 209 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ++ ID+ ++ K D + ++ SDH P+ Sbjct: 210 FSWWDYRMFGFKRNAGLRIDHIMLSPELAKLCESCHI-------DRVPRTWEQPSDHTPV 262 Query: 299 SIDY 302 Sbjct: 263 VAAL 266 >gi|300898982|ref|ZP_07117271.1| exodeoxyribonuclease III [Escherichia coli MS 198-1] gi|300357379|gb|EFJ73249.1| exodeoxyribonuclease III [Escherichia coli MS 198-1] Length = 272 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 83/312 (26%), Gaps = 73/312 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++ VS+NIN L + L + D++ LQE Sbjct: 2 AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +FP + ++ H +A+ K + + Sbjct: 43 DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEE 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + + + V++ F + +Q Q L++++ + + Sbjct: 91 AQRRIIMAEIPSTLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELK 145 Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239 P +I GD N L ++ + + + F Sbjct: 146 RENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRH 205 Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + Q + ++ D + Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258 Query: 291 RLSDHCPISIDY 302 + SDH P+ + Sbjct: 259 KPSDHAPVWATF 270 >gi|298375999|ref|ZP_06985955.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] gi|298267036|gb|EFI08693.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] Length = 348 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 38/350 (10%), Positives = 98/350 (28%), Gaps = 59/350 (16%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRT 50 ++ ++ L+FF P + A +++++N+ + + + R Sbjct: 1 MKIFMFFLLFFASPPLFAQA-TFKVMTYNVENFFDTRDNPTKNDDEFLPSGNRYWTQSRY 59 Query: 51 TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 + + ++ L E+ + + ++ + + + Sbjct: 60 YHKLQQIAKVISAAGEWSTPALIALCEVENDSVLSHLTRRTPLRWQDYRYIITQSP---D 116 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLK 165 I+ A+ ++ L+ + + R + + + I G + V H Sbjct: 117 PRGINVALLYQRNQFFYLRHESIPIRFSGNKH-KLTRDILHVYGKIITGDTLDVFVCHFP 175 Query: 166 SFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 S + + L + L +I GDFN ++ F Sbjct: 176 SRYGGEKESEKDRFDAARTLRGSSDSLL-----LIREKPQILIMGDFNDTPQDRSISEIF 230 Query: 225 WKTIDPN----------DSLIRFPKEKDSRC-NANKNLRNKIPIDYFVMDQNAYKF---- 269 P F ++ ++K +D +++++ Sbjct: 231 AAQAFPENTQITDSTSCTYYNLFASPHITQFPGSHKYQGEWSQLDQIIVNRDLITQESSM 290 Query: 270 -LIQESFS----------------EILYNEDDIKSRGKRLSDHCPISIDY 302 +I ES + SDH P+++D+ Sbjct: 291 HIIPESIHIFAPDFLLTKDKTWRGVRPFRTYYGFKYEGGFSDHLPLTVDF 340 >gi|311279891|ref|YP_003942122.1| exodeoxyribonuclease III [Enterobacter cloacae SCF1] gi|308749086|gb|ADO48838.1| exodeoxyribonuclease III [Enterobacter cloacae SCF1] Length = 268 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K V + +D+ R Sbjct: 42 FP-------LEDVAKLGYNVFYHGQKGHYGVALLTKATPVSVRRGFPGDGEDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + Q L++++ + + Sbjct: 90 RIIMAEIPSAFGNVTVIN-----GYFPQGESRDHPLKFPAKELFYQNLQNYLNTELNNEN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + F Sbjct: 145 PVLIMGDMNISPTDLDIGIGDDNRKRWLRTGKCSFLPEEREWMARLLDWGLVDTFRHAHP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + ++ D ++ S Sbjct: 205 DTQDKFSWFDYRSKGFDDNRGLRIDLLLASSPLAQRCVETGI-------DYEIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|262383588|ref|ZP_06076724.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262294486|gb|EEY82418.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 348 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 37/350 (10%), Positives = 97/350 (27%), Gaps = 59/350 (16%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRT 50 ++ ++ L+FF P + A +++++N+ + + + R Sbjct: 1 MKIFMFFLLFFASPPLFAQA-TFKVMTYNVENFFDTRDNPTKNDDEFLPSGNRYWTQSRY 59 Query: 51 TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 + + ++ L E+ + + ++ + + + Sbjct: 60 YHKLQQIAKVISAAGEWSTPALIALCEVENDSVLSHLTRRTPLRWQDYRYIITQSP---D 116 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLK 165 I+ A+ ++ L+ + + R + + + I G + V H Sbjct: 117 PRGINVALLYQRDQFFYLRHESIPIRFSGNKH-KLTRDILHVYGKIITGDTLDVFVCHFP 175 Query: 166 SFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 S + + L + L +I GDFN ++ F Sbjct: 176 SRYGGEKESEKDRFDAARTLRGSSDSLL-----LIREKPQILIMGDFNDTPQDRSISEIF 230 Query: 225 WKTIDPND-----------SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF---- 269 P + + ++K +D +++++ Sbjct: 231 AAQAFPENTQITDSTSCTYYNLFASPYITQFPGSHKYQGEWSQLDQIIVNRDLITQESSM 290 Query: 270 -LIQESFS----------------EILYNEDDIKSRGKRLSDHCPISIDY 302 +I ES + SDH P+++D+ Sbjct: 291 HIIPESIHIFAPDFLLTKDKTWRGVRPFRTYYGFKYEGGFSDHLPLTVDF 340 >gi|326789162|ref|YP_004306983.1| endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM 5427] gi|326539926|gb|ADZ81785.1| Endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM 5427] Length = 257 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 36/291 (12%), Positives = 87/291 (29%), Gaps = 46/291 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+N+ + R ++ + K D D+V LQE+ + Sbjct: 1 MKVMSFNVR-------ADSILDVRNRWRHRSEIVYEVIKKYDCDVVGLQEVTDRMYMDLN 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS-----FS 138 + + I + + + V++ + ++++ L + Sbjct: 54 KAIDGYYII-------GKGRTKRYFNERNNLLVKEDYNLLEEETFWLSKTPSKTGSSVWY 106 Query: 139 RAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-T 196 R +++ N KI + + HL S + + +++ Sbjct: 107 SMFPRICTTAVIQLANNLKIRIYNTHLDCLLP------------SAREYGLKKIGEYVGE 154 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP----KEKDSRCNANKNLR 252 ++ +P ++ GDFN + + ++ K Sbjct: 155 CYQKEKLPCILMGDFNAGPQSKLIQQFSQGSYSDKRFIAVQDVRKEIYNEATMGHFKGKT 214 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + IDY + + F + K SDH PI + + Sbjct: 215 RGLHIDYIFVSEE---------FEIKDVEIIKYQKNNKYPSDHYPILAEIN 256 >gi|189461907|ref|ZP_03010692.1| hypothetical protein BACCOP_02573 [Bacteroides coprocola DSM 17136] gi|189431301|gb|EDV00286.1| hypothetical protein BACCOP_02573 [Bacteroides coprocola DSM 17136] Length = 289 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 80/302 (26%), Gaps = 31/302 (10%) Query: 8 ALVFFLVPCTASV-AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 +L + CT +V ++NI + + ++ W + Q+ K+ D Sbjct: 14 SLSVATLSCTTQQQPTEVTWGTFNIRYDNPGDSLNNW-------QYRKDNVAQFIKSQDI 66 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 DIV +QE+ + S + Sbjct: 67 DIVGMQEVLHNQLEDLKSRLPEYAEVGVGREDGKTKGEYSPLFYKKDRFEVLDSNTFWLS 126 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 YP + A +R A ++ + ++ F L+ + Sbjct: 127 QYPDSVGFIGWDGACSRIATWAKLKDKKTGKIFMAVNTH---FDHVGTEARRKGALLIIE 183 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC- 245 + + + P V+ GDFN D+ + + Sbjct: 184 KIKEIV--------GDQPAVLTGDFNVTDQSEAYETITTNEFVLKDAYKEAAQREGVDYT 235 Query: 246 ---NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ + E Y + + G+ LSDH P + Sbjct: 236 FHDFGRIPADSCDQIDFIFVTPQIKV--------ESSYIPQEAEEAGQFLSDHNPEVVHL 287 Query: 303 DF 304 F Sbjct: 288 SF 289 >gi|24373409|ref|NP_717452.1| extracellular nuclease, putative [Shewanella oneidensis MR-1] gi|24347681|gb|AAN54896.1|AE015627_14 extracellular nuclease, putative [Shewanella oneidensis MR-1] Length = 948 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 92/337 (27%), Gaps = 56/337 (16%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDADI 68 + +++ S+N+ +G + + T + + AD+ Sbjct: 451 SPVLAEGGNLKVASFNVLNYFNGDGQGSGFPTARGANTLSEFERQKTKIISAMVGIGADV 510 Query: 69 VFLQEMGSYNA------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L E+ + + +N + + N+ + I + Sbjct: 511 FGLMEIENDGFGANSAIADLVAGLNTAVGENRYAYVI-PKINGNNLSAIGTDAITVGLIY 569 Query: 117 RKKNV-------RVLQQSYPLL-GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK--- 165 R V + + PL + F NR + +NG + ++ Sbjct: 570 RSDKVSPQGDARILSSTNSPLDETGQPLFDDGKNRPMLTQAFVLNGSEEALVVAVNHLKS 629 Query: 166 --SFCFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 S C D N +C+ ++ A WI + ++ GD N Sbjct: 630 KGSECAGDPDVNDGQGNCNITRTRAATAAGQWIAAQYPE-QGVLLIGDLNAYAKEDP--- 685 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + F K + + + +D+ + + ++ + I +E Sbjct: 686 --LTALANTGFSELFAKLEKANAYSYVFSGESGQLDHALANAALVDKVVDVTEWHINTDE 743 Query: 283 DDIKSRG-----------------KRLSDHCPISIDY 302 + R SDH P+ I Sbjct: 744 PRVLDYNEEFKTPTQVQDLYASDAYRSSDHDPVVISL 780 >gi|33596079|ref|NP_883722.1| putative exodeoxyribonuclease III [Bordetella parapertussis 12822] gi|33601475|ref|NP_889035.1| putative exodeoxyribonuclease III [Bordetella bronchiseptica RB50] gi|33573082|emb|CAE36724.1| putative exodeoxyribonuclease III [Bordetella parapertussis] gi|33575911|emb|CAE32990.1| putative exodeoxyribonuclease III [Bordetella bronchiseptica RB50] Length = 260 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 31/305 (10%), Positives = 82/305 (26%), Gaps = 70/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N+L+ + + D + +QE+ + Sbjct: 1 MKLATWNVNSLN----------------VRLPQVLDWLAANPVDALCIQELKLTDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + + L+ + R Sbjct: 41 ------KFPLDAFTEAGYHAAWAGQKTYNGVAIISREP-----GFALVRNNPRYEDPQQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + + V+ + + +DS + Y + L+DW+ ++ + Sbjct: 90 -ILAVTLPSPAGDVRVICAYCPNGQSVDSDKYVYKLA------WFDGLRDWLEEEMRTYP 142 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 I GD+N ++ + L + + + Sbjct: 143 RLAILGDYNVAPADADVHNPEKWEGQVLVSEPERAAFRALLDLG-LTDSFRLFEQPEKSF 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ + D ++ SDH P+ Sbjct: 202 SWWDYRQFAFRRNAGLRIDHVLLSDALKPHCVACVI-------DKAPRANEQPSDHAPVI 254 Query: 300 IDYDF 304 F Sbjct: 255 ATLAF 259 >gi|297569596|ref|YP_003690940.1| Endonuclease/exonuclease/phosphatase [Desulfurivibrio alkaliphilus AHT2] gi|296925511|gb|ADH86321.1| Endonuclease/exonuclease/phosphatase [Desulfurivibrio alkaliphilus AHT2] Length = 248 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 37/284 (13%), Positives = 76/284 (26%), Gaps = 42/284 (14%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R++S+NI+ + + + + K+ + D++ LQE+ ++ Sbjct: 3 LRVMSYNIHRAIGVDRLFRP-----------ERIARIIKHHEPDLLLLQEVDVGVPRSRN 51 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + H A + V +++ L R Sbjct: 52 LDLAEELAGLCGYPHRALGLNVALTKGHYGNATLSRFPIVAERNIDLTLPGH-----KAR 106 Query: 144 RAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + +EI NGK + +L + A Sbjct: 107 GCLYTALEIPESNGKSRPLAVFNLHLGLSFNERPRQVGNLVKTPEFAA----------LA 156 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 P ++ GDFN L + + ++ S + +D Sbjct: 157 PDDPCIVGGDFNDWFTRLSP---MFTEVMDFKCASSHQEDFQSPYLTYPSFSPTGGLDKI 213 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + I+ + K SDH P+ D D+ Sbjct: 214 FVRGPFA----------IVKRQRCRMQISKIASDHLPVLADLDW 247 >gi|187735113|ref|YP_001877225.1| Endonuclease/exonuclease/phosphatase [Akkermansia muciniphila ATCC BAA-835] gi|187425165|gb|ACD04444.1| Endonuclease/exonuclease/phosphatase [Akkermansia muciniphila ATCC BAA-835] Length = 253 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 82/305 (26%), Gaps = 59/305 (19%) Query: 3 RKYVLALVF---FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 ++++ L + A + L+S+N+ + +G DY + Sbjct: 5 KRFIFRLCAAAALFLSLFPLQAGECTLMSYNVKNGTGMDG-----------RRDYDRTAR 53 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 D+ LQE+ + + T ++K + + + + Sbjct: 54 VITEEKPDVAALQEL-DQGTIRSGGRDTLQELAARTTLTGTYAKAIDYSGGSYGVGILSR 112 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 + + PL G R R + + W HL + Sbjct: 113 EKPLSVKRIPLPG------REEARVLLMAEF----RDYWFCVTHLSLTREDSNASIDMIA 162 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + + + PF IAGDFN + I +D Sbjct: 163 ALA----------------AKCSKPFFIAGDFNLTPDSEPITRMKKYFILLSDPAQ---- 202 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 K IDY Y+ E+F + + SDH P+ Sbjct: 203 ------KTFPAGHPKECIDYIW----MYRGKKTEAFHVKERRVIEAPA----ASDHRPVK 248 Query: 300 IDYDF 304 + + Sbjct: 249 VTVSY 253 >gi|310767787|gb|ADP12737.1| hypothetical protein EJP617_30560 [Erwinia sp. Ejp617] Length = 303 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 82/311 (26%), Gaps = 75/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L+ + D++ LQE + Sbjct: 36 MKFVSFNINGL----------------RARPHQLQAIVEQHQPDVIGLQE---TKVHDDM 76 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + H +A+ K V + +D+ R Sbjct: 77 FP-------LEEVASLGYHVFCHGQKGHYGVALLCKQQPVAVRRGFAGDNEDA-----QR 124 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + + + L+ ++ Q++++ Sbjct: 125 RIIMADILTPAGPLTVIN-----GYFPQGESRDHPTKFPAKEKFYRDLQSYLEQQQKADN 179 Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 +I GD N + + ++ + Sbjct: 180 QLLIMGDMNISSSDLDIGIGEESRKRWLRTGKCSFLPEEREWMSTLMNWGLYDTWRTQNA 239 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID + + + D ++ Sbjct: 240 TVN-DRFSWFDYRSKGFDDNRGLRIDLILASRPLADRCVATGI-------DYDIRAMEKP 291 Query: 293 SDHCPISIDYD 303 SDH PI ++ Sbjct: 292 SDHAPIWAEFS 302 >gi|198274186|ref|ZP_03206718.1| hypothetical protein BACPLE_00326 [Bacteroides plebeius DSM 17135] gi|198272861|gb|EDY97130.1| hypothetical protein BACPLE_00326 [Bacteroides plebeius DSM 17135] Length = 289 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 82/306 (26%), Gaps = 37/306 (12%) Query: 7 LALVFFLVPCTASVA-QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 L+L + C + ++ ++NI + + ++ W + + K + Sbjct: 13 LSLCMTIASCHSPQPTSEITWSTFNIRYDNPYDSLNSWTYRK-------DTVANFIKAQN 65 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 DIV +QE+ + + + N Sbjct: 66 LDIVGMQEVLHHQLEDLKARLPEYAEVGVGREDGKTQGEYAPLFYKKDRFELLDNNTFWL 125 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 YP + A R A ++ + I+ F L+ Sbjct: 126 SQYPDSVGFIGWDGACTRIATWAKLKDKTNGKIFMAINTH---FDHVGTEARKKGALLII 182 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ + + P V+ GDFN + D+ +++ + Sbjct: 183 EKIKEIV--------GDQPAVVTGDFNVSDQSEAYQTITGNSFVLKDAHKTALQQEGA-- 232 Query: 246 NANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ + + Y ++ + K LSDH P Sbjct: 233 -SYTFHDFGRIPADSCEKIDFIFVTPQIEV--------QRSYIPEENREAKKFLSDHNPE 283 Query: 299 SIDYDF 304 + F Sbjct: 284 IVHLSF 289 >gi|194289407|ref|YP_002005314.1| exodeoxyribonuclease iii [Cupriavidus taiwanensis LMG 19424] gi|193223242|emb|CAQ69247.1| EXODEOXYRIBONUCLEASE III [Cupriavidus taiwanensis LMG 19424] Length = 276 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 85/309 (27%), Gaps = 67/309 (21%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSY 77 +R+ SWN+N+L R L + + D + LQE+ Sbjct: 7 PGQGPLRIASWNVNSL------------KVRLPQVLQWLAEQEQAGAPIDALCLQELK-- 52 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 P + + + + + +A+ ++ + ++ F Sbjct: 53 ------LPDDKYP--LAELENAGFHSIYTGQKTYNGVAILARDAS-MPGPVDVVRNIPGF 103 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 A R ++ + ++ + + LDS + Y Q + + W+ + Sbjct: 104 EDAQQR-----VIAATYGDLRLVCAYFPNGQSLDSDKFAYK------LQWLEAMTAWLRE 152 Query: 198 KKESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 + + GDFN + + F ++ + Sbjct: 153 EMARHPRLALLGDFNIAPEDRDVHDPAKWEGQNLVSPPERAAFAALLELGLADAF-RKFE 211 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 A ++ ID+ ++ + D + ++ S Sbjct: 212 QPEKAFSWWDYRMLAFRRNAGLRIDHILLSPALAEQCTACVI-------DRVPRTWEQPS 264 Query: 294 DHCPISIDY 302 DH P+ Sbjct: 265 DHTPVVATL 273 >gi|114328666|ref|YP_745823.1| exodeoxyribonuclease III [Granulibacter bethesdensis CGDNIH1] gi|114316840|gb|ABI62900.1| exodeoxyribonuclease III [Granulibacter bethesdensis CGDNIH1] Length = 275 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 84/305 (27%), Gaps = 61/305 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 VR+ +WNIN+L LL + LD D++ LQE + Sbjct: 6 VRVATWNINSL----------------RLRLPLLEKVLAELDPDVLCLQE---TKVPDPL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + H + +A+ + + ++ P AK Sbjct: 47 FPADLFPGRAAEHHGYAHV-AYRGMKGYNGVAILSRIPFTVDEAAPDWCAKGDCRH---- 101 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + + + + + ++ + D + +P + + + + Sbjct: 102 --MAVSLAVPSGPVALHNFYVPAG--GDEPDPAINPKFAHKLAFVEEATAYFAAQSPFTR 157 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N ++ + + S Sbjct: 158 TVLV-GDLNIAPLEHDVWSHKQLLNVVSHTPPETTRMRQWLETGFVDAIRHFVPSDRKHY 216 Query: 249 KNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +D+ + + L + +R SDH P+ Sbjct: 217 TWWSYRNRDWRASDRGRRLDHVWVSPDLVSSLQGHT-------TLKEARDWERTSDHVPV 269 Query: 299 SIDYD 303 S+ Sbjct: 270 SVTLS 274 >gi|218673944|ref|ZP_03523613.1| exodeoxyribonuclease III Xth [Rhizobium etli GR56] Length = 263 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 99/306 (32%), Gaps = 70/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + L Q+ K+ D DIV LQE+ + + + Sbjct: 1 MKIATWNING----------------VKARIDNLTQWLKDSDPDIVCLQEIKT---IDEG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + +A+ K A D SR Sbjct: 42 FPRLE-------IEALGYHVETHGQKGFNGVAILSKTSPSEVNRGLPGDALDEQSRF--- 91 Query: 144 RAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +E + + +I V I+L + +D+ + Y + + L+ + ++ Sbjct: 92 --LEAVFTLPDTRILRVCCIYLPNGNPVDTEKYPYKLA------WMERLRMFAAERLAYE 143 Query: 203 VPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 V+AGD+N +L + ++ ++ N L + Sbjct: 144 EILVLAGDYNVIPEPHDCFDPKVWESDALFLPQTREAFRRLE-NLGLTDAVRATTDATRL 202 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ A + + + + ++ SDH P+ Sbjct: 203 YSFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIEKHV-------RAWEKPSDHVPV 255 Query: 299 SIDYDF 304 +DF Sbjct: 256 VAYFDF 261 >gi|66045712|ref|YP_235553.1| exonuclease III [Pseudomonas syringae pv. syringae B728a] gi|63256419|gb|AAY37515.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Pseudomonas syringae pv. syringae B728a] gi|330971266|gb|EGH71332.1| exonuclease III [Pseudomonas syringae pv. aceris str. M302273PT] Length = 270 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 33/314 (10%), Positives = 81/314 (25%), Gaps = 78/314 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++S+NIN L + L D++ LQE + Sbjct: 1 MKIISFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDEQFPQ 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + H +A+ +N + G + + Sbjct: 45 AEVEALGYHVHFH------------GQKGHYGVALLSRNAPLALHK----GFEGDDEESQ 88 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + NG+ + +++ F + + + L+ + + Sbjct: 89 KRFIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQTLLEGHFRN 143 Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240 P ++ GD N ++L ++ + + + F Sbjct: 144 DQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRHL 203 Query: 241 KDSRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + ID + + + D Sbjct: 204 YPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKEAGV-------DYDLRAM 256 Query: 290 KRLSDHCPISIDYD 303 ++ SDH PI ++ Sbjct: 257 EKPSDHAPIWLELS 270 >gi|302552172|ref|ZP_07304514.1| endonuclease/exonuclease/phosphatase [Streptomyces viridochromogenes DSM 40736] gi|302469790|gb|EFL32883.1| endonuclease/exonuclease/phosphatase [Streptomyces viridochromogenes DSM 40736] Length = 274 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 41/298 (13%), Positives = 77/298 (25%), Gaps = 46/298 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80 +R+V+WN+ + + + L D+V LQE+ N Sbjct: 3 MRIVTWNLWWRFGP------------WQTRQKAILTALRELRPDVVGLQEVWAADGENLA 50 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + ++ +R + AV + V + PL ++ Sbjct: 51 EWLAGELGLHCAWAPSPAPERWRRRIGDATVDIGNAVLSRWPVVDRDVLPLPAPAETDD- 109 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R A+ + G + H S + + QA L ++ + + Sbjct: 110 --GRLALYARLAAPGHDVPFFTAHFTSVPHGSA----------VRCGQAAALAGFVARHR 157 Query: 200 ESLV-PFVIAGDFNRKINYLG-------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245 P V+ GD N + + + D + Sbjct: 158 GGTPFPPVVTGDLNARPDSDEVRLLGGRGTAPAVPGQVLLDAWEYADPAAPAATWDAANP 217 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY + + D G SDH + D D Sbjct: 218 YVAAPHEPSARIDYVHV---GPPGPGGLGRVRDVRRACDGPVDGVWPSDHAAVVADLD 272 >gi|289549377|ref|YP_003470281.1| beta-hemolysin [Staphylococcus lugdunensis HKU09-01] gi|289178909|gb|ADC86154.1| beta-hemolysin [Staphylococcus lugdunensis HKU09-01] Length = 328 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 41/299 (13%), Positives = 96/299 (32%), Gaps = 31/299 (10%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++ + N+ L +++ N + +D Y + D+V L E+ + A Sbjct: 37 DSLKITTHNVYFLPT----AIYPNWGQSQRADLISKADYIQGQ--DVVILNELFDHKASN 90 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGA 133 ++ Y T + ++ + + K V Q+ + Sbjct: 91 RLLTNLKSQYPYQTPIVGQGTEGWQKTSGSYRKLKKVSGGVGIVSKWPIVQQEQHIYKNG 150 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + S GN+ + + NGK ++ HL++ + ++ Q + +K Sbjct: 151 CGADS-VGNKGFAYIKINKNGKYQHIIGTHLQA----EDPVCMKGKDQTIRQSQMEEIKQ 205 Query: 194 WI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP-----NDSLIRFPKEKDSRCNA 247 +I + P I GD N + + + + N Sbjct: 206 FIKDKNIPKDEPVYIGGDLNVIKGSAEYQKMSDNLNVSMPKQYEGNAYSWDTQTNGIANY 265 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPISI 300 N +DY ++D++ + + + + + + + SDH P+S Sbjct: 266 NYPKLEPQHLDYILLDRDHAQPSSWHNHTHKVKSPEWSVKSWGKTYRYNDYSDHYPVSA 324 >gi|171057931|ref|YP_001790280.1| exodeoxyribonuclease III Xth [Leptothrix cholodnii SP-6] gi|170775376|gb|ACB33515.1| exodeoxyribonuclease III Xth [Leptothrix cholodnii SP-6] Length = 254 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 80/303 (26%), Gaps = 74/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N+LS L + + D + LQE + Sbjct: 1 MKLATWNVNSLS----------------VRLPQLLDWLVSAQPDALVLQETKLTDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + V + R Sbjct: 41 ------KFPAAELLAAGYHAVWHGQKTYNGVALLSRTPAVDVVRNI-----PALDDPQAR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V+ + + DS + Y L+ W+ + + Sbjct: 90 VIAGTV-----DGVRVIGGYFPNGQAPDSEKFVYK------MGWLTALEAWLQTELAAHT 138 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D ++ + + F + + + Sbjct: 139 QLVLMGDFNIAPEDRDVYDPVAWAGQIHCTPEERAHFQALVGLGLVDAF-RLFEQPPKSW 197 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ + + D + +R SDH P+ Sbjct: 198 SWWDYRNLAFRKNQGLRIDHVLVGEALKARVTACQI-------DKAPRKNERPSDHAPVW 250 Query: 300 IDY 302 ++ Sbjct: 251 VEL 253 >gi|33866339|ref|NP_897898.1| exodeoxyribonuclease III [Synechococcus sp. WH 8102] gi|33639314|emb|CAE08322.1| exodeoxyribonuclease III [Synechococcus sp. WH 8102] Length = 278 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 36/306 (11%), Positives = 82/306 (26%), Gaps = 67/306 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + + + D++ LQE + + Sbjct: 1 MRIATWNVN----------------SVRTRLEQVLCWLEQTKPDLLCLQETKVDDPL--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +A+ + + + D + A Sbjct: 42 -------FPMQAFENAGWQVSIHGQKSYNGVALVSREPLEDVRCGFVGELPD-DAEAATL 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + VL++++ + L S + Y LK ++ + E Sbjct: 94 GEQRRVISGLLDGVRVLNLYVPNGSSLSSEKYPYK------LTWLGCLKRYLDAQAERGE 147 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P + GDFN + D + + + L + + Sbjct: 148 PLCMVGDFNIALEARDIHDPDRLSGSVMASDAERDALREAL--GNRLQDAFRMFEPDAGH 205 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ + + S + SDH P+ Sbjct: 206 WSWWDYRTGAWDRDRGWRIDHIYLCEELMGLARSCSIH-------KQLRGNVQPSDHAPV 258 Query: 299 SIDYDF 304 S+D D+ Sbjct: 259 SVDLDW 264 >gi|156742734|ref|YP_001432863.1| endonuclease/exonuclease/phosphatase [Roseiflexus castenholzii DSM 13941] gi|156234062|gb|ABU58845.1| Endonuclease/exonuclease/phosphatase [Roseiflexus castenholzii DSM 13941] Length = 1641 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 47/336 (13%), Positives = 92/336 (27%), Gaps = 54/336 (16%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLW----KNSVKRTTSDY-------TLLRQYAKNLD 65 +V +R+ ++N+ + + R + L LD Sbjct: 518 PPAVGGDLRVAAFNVLNYFNTFSGCTFGVGGPPADCRGAENATEFTRQNAKLIPALLRLD 577 Query: 66 ADIVFLQEMGSY-----NAVAKVFPKNTW------CIFYSTERLINHSKRDSNNDIHTAI 114 AD++ L E+ + +A+A++ + F + + + I AI Sbjct: 578 ADVLGLIEIENDGYGPTSALAELVNRLNAATAPGTYAFIDVDAATGQTNALGTDAIKVAI 637 Query: 115 AVRKKNVRVLQQS-----YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 + V + Q+ + DS R A G+ + V+ H KS Sbjct: 638 LYKPAVVTPVGQTAALNTVAFVNGGDSAPRNRPALAQTFRHRATGEDVTVVVNHFKSKGS 697 Query: 170 LDSLENTYSPSCS---LLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDF 224 + + + + AQ L W+ +I GD N + Sbjct: 698 PCDAPDAGDGAGNCNIVRRNAAQELVAWLAGNPTGTGDNDILILGDLNSYAQEDPID--- 754 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + + +DY + +A + I +E Sbjct: 755 --VLRAAGYTDLAQTFIGDEAYSYVFNGQWGYLDYALASPSALAKVSGVVEYHINADEPS 812 Query: 285 IKSRG-----------------KRLSDHCPISIDYD 303 + R SDH PI + + Sbjct: 813 VLDYNTNFKSAGQQVSLFATDQYRTSDHDPILVGLN 848 >gi|320089760|pdb|3K55|A Chain A, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin From Staphylococcus Aureus gi|320089761|pdb|3K55|B Chain B, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin From Staphylococcus Aureus gi|320089762|pdb|3K55|C Chain C, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin From Staphylococcus Aureus gi|320089763|pdb|3K55|D Chain D, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin From Staphylococcus Aureus gi|320089764|pdb|3K55|E Chain E, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin From Staphylococcus Aureus gi|320089765|pdb|3K55|F Chain F, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin From Staphylococcus Aureus gi|320089766|pdb|3K55|G Chain G, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin From Staphylococcus Aureus gi|320089767|pdb|3K55|H Chain H, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin From Staphylococcus Aureus gi|320089768|pdb|3K55|I Chain I, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin From Staphylococcus Aureus gi|320089769|pdb|3K55|J Chain J, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin From Staphylococcus Aureus gi|320089770|pdb|3K55|K Chain K, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin From Staphylococcus Aureus gi|320089771|pdb|3K55|L Chain L, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin From Staphylococcus Aureus gi|320089772|pdb|3K55|M Chain M, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin From Staphylococcus Aureus gi|320089773|pdb|3K55|N Chain N, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin From Staphylococcus Aureus gi|320089774|pdb|3K55|O Chain O, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin From Staphylococcus Aureus gi|320089775|pdb|3K55|P Chain P, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin From Staphylococcus Aureus Length = 306 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 87/292 (29%), Gaps = 31/292 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++LVS N+ LS L+ N + +D Y K + D+V E A K Sbjct: 29 DLKLVSHNVYMLST----VLYPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDK 82 Query: 83 VFPKNTWCIFYSTE--------RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + Y T S +A+ K + + Sbjct: 83 LLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC 142 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 F N+ V +E NGK + V+ H +S DS + ++Q + + D+ Sbjct: 143 -GFDNDSNKGFVYTKIEKNGKNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDF 197 Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNAN 248 + + I GD N D K ++ ND L N Sbjct: 198 VKKKNIPKDETVYIGGDLNVN-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYN 256 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +DY D++ + + + SDH PI Sbjct: 257 YPNGKPEHLDYIFTDKDHKQPKQLVNEVVT-----EKPKPWNDFSDHYPIKA 303 >gi|226358180|ref|YP_002787919.1| Exodeoxyribonuclease III [Deinococcus deserti VCD115] gi|226319823|gb|ACO47817.1| putative Exodeoxyribonuclease III [Deinococcus deserti VCD115] Length = 270 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 81/303 (26%), Gaps = 72/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N+L+ + + + D++ LQE + Sbjct: 1 MKLATWNVNSLN----------------VRLGQVMAWLEAQQPDVLALQETKLPDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + S + +A+ + Q R Sbjct: 41 ------RFPVAELEALGYRAVFSGQKSYNGVALLSRLPLEDVQ------IGIPGLDDEQR 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R V V + V+ +++ + +DS + TY + ++ W+ + + Sbjct: 89 RVVAATV----GGMRVVCLYVPNGQAVDSPKYTYK------LEWLSAVRAWLQLELMAHP 138 Query: 204 PFVIAGDFNRKINYLG---NNDDFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249 + GDFN + + + L + Sbjct: 139 RLAVVGDFNVAPEDRDVHSPKRWAGQVLVSEPERQAFRALLDLGLHDAFRLHPQPERVFS 198 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ID+ ++ + D R +R SDH P+ Sbjct: 199 WWNYGRLGFPRNWGLRIDHVLVSGILAAECQSCTV-------DLEPRRHERPSDHAPVVA 251 Query: 301 DYD 303 + Sbjct: 252 TFS 254 >gi|170700263|ref|ZP_02891278.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria IOP40-10] gi|170134847|gb|EDT03160.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria IOP40-10] Length = 599 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 42/320 (13%), Positives = 84/320 (26%), Gaps = 48/320 (15%) Query: 19 SVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVF 70 A VR+ S+N+ N + + + R + + L AD++ Sbjct: 286 PQAD-VRVASFNVFNYFNGDGTGGGFGDPSGRGAKTPAAFARQEAKIVAALRALRADVIG 344 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYP 129 L E+ + + R ++ R + I A+ + V P Sbjct: 345 LMEIANNGLGPASAVQRLATRLGDGWRAVDPGTARLGRDAIAVALLYDSRTVE------P 398 Query: 130 LLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSC------ 181 + A NR + + V HLKS + S Sbjct: 399 VGRAATVALDGRNRPPLAQTFRRIGGTRAFTVAVNHLKSKNCPHATGPDLDQSDGQGCWN 458 Query: 182 SLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + ++ A+ + W+ + ++ GD N + ++ + Sbjct: 459 ATRTRAAERVAAWLATSPTGAAADGVLLIGDLNSYAKEDP-----LRALESRGYANLVAR 513 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED---------------- 283 + +D+ + + I +E Sbjct: 514 FVGNAGYTYVFRGEAGNLDHALATPPLAARVKAVHAWHINADEPIALQAVPDYKTPAQQA 573 Query: 284 -DIKSRGKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 574 AYYAPDAYRSSDHDPVVIDL 593 >gi|332533496|ref|ZP_08409359.1| hypothetical protein PH505_aq00380 [Pseudoalteromonas haloplanktis ANT/505] gi|332037043|gb|EGI73501.1| hypothetical protein PH505_aq00380 [Pseudoalteromonas haloplanktis ANT/505] Length = 910 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 44/319 (13%), Positives = 91/319 (28%), Gaps = 40/319 (12%) Query: 20 VAQKVRLVSWNINTLSEQEG--VSLWKNSVKRTTSDY----TLLRQYAKNLDADIVFLQE 73 +R+ S+N+ +G + T +++ + ++AD+V L E Sbjct: 459 AEADLRVASFNVLNYFNGDGQGGGFPTSRGADTEAEFIRQEAKIVSAISAIEADVVGLME 518 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG- 132 + + + + N++ D N D A+ + + + Sbjct: 519 IENDGFGEFSAIASLVDALNDADSANNYAFVDFNVDQIGTDAITTALIYRANKVEEVGSA 578 Query: 133 --AKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFL-----DSLENTYSPSCSL 183 ++ NR + + + V HLKS ++ + Sbjct: 579 AITTEAPFDFSNRAPIAQSFKSIETDEVFTVAVSHLKSKSCGSASGNNADLGDGQGCWNE 638 Query: 184 LSQQ-AQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + Q A DW+ K ++ GD N K + + Sbjct: 639 IRTQGANAFADWLDSKPTGVDDEDTILVGDMNAYAMEDPIRAFADKGYKN----VVAEID 694 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------- 289 D+ + +D+ V Q+ ++ + I +E Sbjct: 695 GDTLGYSYSFSGRAGSLDHAVATQSLLSKVVAATDWHINADEPISLDYNVEFKSEGQQSS 754 Query: 290 ------KRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 755 LYSESAYRASDHDPVIIDI 773 >gi|182415509|ref|YP_001820575.1| endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] gi|177842723|gb|ACB76975.1| Endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] Length = 298 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 83/301 (27%), Gaps = 49/301 (16%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 TA+ +R++S+N+ S +++ + D++ QE Sbjct: 35 TTATAPLALRVMSFNLRFAS--------PQPPHAWPERRPIMQHVIEQTAPDLIGTQEGL 86 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR------VLQQSYP 129 + I + + A+ R++ P Sbjct: 87 YTQLRDLAADLPAY-------EWIGLGREGGSRGEFMAVFYRRERFEPVAFDHFWLSDTP 139 Query: 130 LLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 + ++ R + +G++ + + H F +E + L+ + Sbjct: 140 DVIGSMTWGNNYRRMVTWVRFRERASGREFYFWNTH-----FDHEVETARQKAAILIRDR 194 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 L ++ VP ++ GDFN + + D+ + N Sbjct: 195 LAQL--------DASVPLLLVGDFNCAAGNSPAYETLTREAGLTDTWTAATARVNEGFNT 246 Query: 248 NKNLRNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 N ID+ + + + G+ SDH P+ D Sbjct: 247 FHNYEPPRHDGVRIDWILARTPSA---------VPRAEIVTYRENGQTPSDHFPVLADVQ 297 Query: 304 F 304 F Sbjct: 298 F 298 >gi|87303215|ref|ZP_01086008.1| exodeoxyribonuclease III [Synechococcus sp. WH 5701] gi|87282110|gb|EAQ74071.1| exodeoxyribonuclease III [Synechococcus sp. WH 5701] Length = 283 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 91/304 (29%), Gaps = 68/304 (22%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + +WN+N S + + + +++ LQE +A Sbjct: 3 IATWNVN----------------SVRSRLEQVVAWLELERPEVLCLQETKVEDAA----- 41 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ--SYPLLGAKDSFSRAGNR 143 + +S S + +A+ + + LL + + + A + Sbjct: 42 -----FPVGAFSDLGYSAVISGQKAYNGVAILSRLPLEDVRIGFDALLPDEPAVALAEQK 96 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + +E + VL++++ + L S + Y + L+ ++ + Sbjct: 97 RVISARIE----GVRVLNLYVPNGSALRSEKYAYKLA------WLACLERYLKVQDADGD 146 Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249 P + GDFN ++ +D + ++ L + + Sbjct: 147 PVCMVGDFNIALDDRDIHDPKRLSGGIMASDPERDALRLALDERLADVFRLFEPERGHWS 206 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ + Q + + + D + SDH P+ + Sbjct: 207 WWDYRSGAWDRDSGWRIDHIYLSQELQERATGCLIHKAVRGND-------KPSDHAPVVV 259 Query: 301 DYDF 304 + Sbjct: 260 QVQW 263 >gi|291522762|emb|CBK81055.1| exodeoxyribonuclease III [Coprococcus catus GD/7] Length = 258 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 83/305 (27%), Gaps = 78/305 (25%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 KV+L+SWN+N L G LDADI LQE A Sbjct: 6 DKVKLISWNVNGLRAVVGKGF---------------VDIFNELDADIFCLQETK-LQAGQ 49 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + +++ + ++ AV + + + + D+ R Sbjct: 50 IELDLPGYEQYWN----------YAERKGYSGTAVFTRIKPLSVRYGMDIAEHDTEGR-- 97 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 ++ + ++++++ + + + L+ Sbjct: 98 -------VITLEYDSFYLVNVYTPNSKDGLARLPYRMKWEDDFRNYLKTLEQ-------- 142 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P V+ GD N + + F + Sbjct: 143 TKPVVMCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKMTELLAAGFIDTFRYFYPDKTG 202 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDYF++ + LI S + ++ SDHCP Sbjct: 203 EYSWWSYRFNARKNNAGWRIDYFIVSDALKERLISASIHQEIF-----------GSDHCP 251 Query: 298 ISIDY 302 + ++ Sbjct: 252 VELEL 256 >gi|171317433|ref|ZP_02906625.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5] gi|171097388|gb|EDT42231.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5] Length = 600 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 42/320 (13%), Positives = 87/320 (27%), Gaps = 48/320 (15%) Query: 19 SVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVF 70 A VR+ S+N+ N + + + R + + L AD++ Sbjct: 286 PQAD-VRVASFNVFNYFNGDGAGGGFGDPSDRGAKTPAAFARQEAKIVAALRALRADVIG 344 Query: 71 LQEMGSY-NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 L E+ + + A + + + + R + I A+ + + P Sbjct: 345 LMEIANNGHGPASAVQRLAAQLGGGWRAVDPGTARLGRDAIAVALLYDSRTIE------P 398 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKK--IWVLDIHLKSFCFLDSLENTYSPSC------ 181 + A NR + G V HLKS + S Sbjct: 399 VGRAATVALDGRNRPPLAQTFRRTGGTRAFTVAVNHLKSKNCPRATGPDLDQSDGQGCWN 458 Query: 182 SLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + ++ A+ + W+ + ++ GD N + ++ + + Sbjct: 459 ATRTRAAERVAAWLATSPTGAAADGVLLIGDLNSYAKEDP-----LRALESHGYANLVAR 513 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED---------------- 283 + +D+ + + I +E Sbjct: 514 FVGNAGYTYVFRGEAGNLDHALATPPLAARVKAVHAWHINADEPIALQAVPDYKTPAQQA 573 Query: 284 -DIKSRGKRLSDHCPISIDY 302 R SDH PI +D Sbjct: 574 AYYAPGAYRSSDHDPIVVDL 593 >gi|257468819|ref|ZP_05632913.1| endonuclease/exonuclease/phosphatase [Fusobacterium ulcerans ATCC 49185] gi|317063071|ref|ZP_07927556.1| endonuclease/exonuclease/phosphatase [Fusobacterium ulcerans ATCC 49185] gi|313688747|gb|EFS25582.1| endonuclease/exonuclease/phosphatase [Fusobacterium ulcerans ATCC 49185] Length = 285 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 43/317 (13%), Positives = 106/317 (33%), Gaps = 53/317 (16%) Query: 2 IRKYVLALVFFLVPCTASVAQK-------------VRLVSWNINTLSEQEGVSLWKNSVK 48 ++K LAL+F ++ + K ++++++NI + Sbjct: 1 MKK-ALALLFVILSVVSFAETKVLYNKKITKNNPKMKIMTYNIAAGANN----------- 48 Query: 49 RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108 D + + K ++ DIV +QE+ + + + ++ K ++ Sbjct: 49 -FKVDLKVTAETIKKVNPDIVAIQEVDRNTNRSGKIDQAQILADLTGYNMVF-GKTIDHD 106 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSF---SRAGNRRAVELLVEINGKKIWVLDIHLK 165 IA+ K+ + QQS L + R A+ +E+ G ++ + I+ Sbjct: 107 GGDYGIAILSKHPILSQQSLILPSFPNGDTTSPGYEQRIALITQIEVPGFEVPITFINTH 166 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 + ++ QQ + + + + ++AGDFN +N + + Sbjct: 167 L---------DWHEDPAVRLQQIRTINEITLDMRGIK---ILAGDFNDTVNSVIGKEM-- 212 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + + + ++ ID +++ + Sbjct: 213 ------ERYWVSVFDDKIDHRTWPAVNPEVAIDQIYLNKAQVWEAKTY---VPNKENEKD 263 Query: 286 KSRGKRLSDHCPISIDY 302 + ++SDH P+ +D Sbjct: 264 GIQWNKVSDHIPVIVDL 280 >gi|207724128|ref|YP_002254526.1| exodeoxyribonuclease III protein [Ralstonia solanacearum MolK2] gi|206589337|emb|CAQ36299.1| exodeoxyribonuclease III protein [Ralstonia solanacearum MolK2] Length = 269 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 96/303 (31%), Gaps = 61/303 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+L + + + +D T + D++ LQE+ + + Sbjct: 1 MRVATWNVNSL--KVRLPHVLQWLGEREADATPI---------DLLCLQELKLPDDRYPL 49 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + + +A+ + + + ++ F+ R Sbjct: 50 AELDA----------AGYASLFTGQKTYNGVAILARKA-AMPEGRDVIKNIPGFADEQQR 98 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V ++ G + V+ + + LDS + Y + L+DW+ + ++ Sbjct: 99 -IVAATYDVAGGPVRVISAYFPNGQALDSDKMVYK------MRWLAALQDWLKAEMDAHP 151 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GDFN + ++ ++ + F + + Sbjct: 152 RLMLLGDFNIAPDDRDVHDPKKWEGMNLVSPEERAAFRALESAGLVDAFRMFEQAD-KLF 210 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID+ ++ + D ++ SDH P+ Sbjct: 211 SWWDYRLFAFKRNAGLRIDHILLSPELAQRCESCHI-------DRAPRGWEQPSDHTPVV 263 Query: 300 IDY 302 Sbjct: 264 AAL 266 >gi|285017614|ref|YP_003375325.1| hypothetical protein XALc_0819 [Xanthomonas albilineans GPE PC73] gi|283472832|emb|CBA15337.1| conserved hypothetical protein [Xanthomonas albilineans] Length = 289 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 44/292 (15%), Positives = 89/292 (30%), Gaps = 33/292 (11%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P S ++++S+N+ V + KR + + + D+ QE+ Sbjct: 27 PTPTSRPMPLKVMSFNVR-------VPIDTEGDKRWEVRRSAMAVLIRAQHPDLFGTQEL 79 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 A + F R N + P + Sbjct: 80 IKRQADYLATKLPDYRWFG-RSRDGNEDGERMGVFYDRHRLKLLASGDFWLSDTPEIPGS 138 Query: 135 DSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 S+ R L E +G++ ++ D HL +S + +L+ + + L Sbjct: 139 ISWGHPLPRMVNWGLFERIADGRRFYLFDTHLPYREQDES---ARAKGAALILSRLRAL- 194 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + VP V+ GDFN + D + P+ ++ + Sbjct: 195 -------PANVPVVLTGDFNTVQDSPTYRTLTRTLTDARTQVT-QPQGPEATFHDFTGHP 246 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ ID+ + Y D + +G SDH P+ ++ + Sbjct: 247 DR-RIDWILTRG----------LHATRYATLDARPQGHWPSDHFPVIAEFAW 287 >gi|163759458|ref|ZP_02166543.1| exodeoxyribonuclease III [Hoeflea phototrophica DFL-43] gi|162283055|gb|EDQ33341.1| exodeoxyribonuclease III [Hoeflea phototrophica DFL-43] Length = 260 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 95/305 (31%), Gaps = 69/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + L+ + + D DI LQE+ S V + Sbjct: 1 MKIATWNING----------------VKARIENLQAWLRESDPDIACLQEIKS---VDEG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + +A+ K D +R Sbjct: 42 FPRLELEAL-------GYHVETHGQKGFNGVAILSKQSPEEVNRGLPGDDTDEQARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + + + V+ ++L + +D+ + Y + + L+ + + Sbjct: 92 --IEAVFSKDSGVLRVVSLYLPNGNPVDTEKFPYK------LRWMERLQAFAEDRLALEE 143 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGD+N + + ++ ++ N + + + Sbjct: 144 PLVLAGDYNVIPEPVDCHNPKAWEGDALFRPESRTAFRRLE-NLGFTDALRSANDQAETY 202 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ A L + + + ++ SDH P++ Sbjct: 203 TFWDYQAGAWPKNNGIRIDHLMLSPEAADNLEWANVEKHV-------RGWEKPSDHVPVA 255 Query: 300 IDYDF 304 I F Sbjct: 256 ISLGF 260 >gi|283478229|emb|CAY74145.1| xthA [Erwinia pyrifoliae DSM 12163] Length = 300 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 82/311 (26%), Gaps = 75/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L+ + D++ LQE + Sbjct: 33 MKFVSFNINGL----------------RARPHQLQAIVEQHQPDVIGLQE---TKVHDDM 73 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + H +A+ K V + +D+ R Sbjct: 74 FP-------LEEVASLGYHVFCHGQKGHYGVALLCKQQPVAVRRGFAGDNEDA-----QR 121 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + + + L+ ++ Q++++ Sbjct: 122 RIIMADILTPAGPLTVIN-----GYFPQGESRDHPTKFPAKEKFYRDLQSYLEQQQKADN 176 Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 +I GD N + + ++ + Sbjct: 177 QLLIMGDMNISSSDLDIGIGEESRKRWLRTGKCSFLPEEREWMSTLMNWGLYDTWRTQNA 236 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID + + + D ++ Sbjct: 237 TVN-DRFSWFDYRSKGFDDNRGLRIDLILASRPLADRCVATGI-------DYDIRAMEKP 288 Query: 293 SDHCPISIDYD 303 SDH PI ++ Sbjct: 289 SDHAPIWAEFS 299 >gi|254670248|emb|CBA05478.1| exodeoxyribonuclease III [Neisseria meningitidis alpha153] Length = 256 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 87/305 (28%), Gaps = 73/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + DI+ LQE Sbjct: 1 MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ +N + R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVH-----IGLPALPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V++++ + LDS + Y Q L +++ + Sbjct: 90 RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRYG 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D ++K + + Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWFKNLLDLGLTDSLRQVHPEGAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ L D +R SDH P++ Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDV-------RVDLETRALERPSDHAPVA 251 Query: 300 IDYDF 304 ++D+ Sbjct: 252 AEFDW 256 >gi|332299279|ref|YP_004441200.1| Endonuclease/exonuclease/phosphatase [Porphyromonas asaccharolytica DSM 20707] gi|332176342|gb|AEE12032.1| Endonuclease/exonuclease/phosphatase [Porphyromonas asaccharolytica DSM 20707] Length = 360 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 89/349 (25%), Gaps = 59/349 (16%) Query: 3 RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNS-----------VKRTT 51 R +VL + Q+ +VS+N+ L + + W + +R Sbjct: 20 RGFVLFFLLLGSGYCLVAQQRFTIVSYNVENLFDTIPSTRWDDREYLPTARKGWTAERMK 79 Query: 52 SDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107 L + + ++ LQE+ S A+ ++ S R Sbjct: 80 RKCHQLAEVISHATAWDIPALIALQEVESVEALEQLAHHTLLRGGNYKTICATGSDR--- 136 Query: 108 NDIHTAIAVRKKNVRVLQ-QSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLK 165 H A+ V + +PL DS R + + + + ++ HL Sbjct: 137 RGSHVALLYDADRFAVEHTEEWPLRITPDSIY--PTRNLLFVSGRLPSAAPLSLIVCHLP 194 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI------NYLG 219 S + E + +L + L V+ GDFN ++ Sbjct: 195 SRRGGATAEAARAALIEMLRIRTDSLLR-----ANPEQSIVVVGDFNATPEDGLTDSWAV 249 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDS-----RCNANKNLRNKIPIDYFVMDQNAYKFL---- 270 + + D + P D + ID + + Sbjct: 250 SYHAYLSQSDSLAMVDLTPPFTDEQLKTMPPGSYYYRGYWERIDRLFVSRTLLADTRYPR 309 Query: 271 -----------------IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + S SDH P+ Sbjct: 310 LELETVRIALPPQKYMHESPAPWGRPRRTYGGDSYLAGPSDHLPLVATL 358 >gi|330829038|ref|YP_004391990.1| exodeoxyribonuclease III [Aeromonas veronii B565] gi|328804174|gb|AEB49373.1| Exodeoxyribonuclease III [Aeromonas veronii B565] Length = 268 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 35/307 (11%), Positives = 76/307 (24%), Gaps = 72/307 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKIISFNINGL----------------RARLHQLQAIIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K V + + R Sbjct: 42 -------FPLADVEAMGYHVEFHGQKAHYGVAIMSKQKPVKVEK-----GFPTDDEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + E + I + + F + + + L+ ++ Sbjct: 90 RMIMATFEREDGSL----IKVMNGYFPQGESQDHETKFPAKQKFYEDLQHYLETNHTPDD 145 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 V+ GD N L ++ + + F Sbjct: 146 QLVLIGDMNISPTDLDIGIGEANRKRWLRDGKCSFLPIEREWMERLKGFGLTDTFRAANP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + C + ID + + + D ++ S Sbjct: 206 TECERFSWFDYRSKGFDENRGLRIDLIMASDALKDSVTETGI-------DYELRGIEKPS 258 Query: 294 DHCPISI 300 DH PI Sbjct: 259 DHAPIWA 265 >gi|262274649|ref|ZP_06052460.1| exodeoxyribonuclease III [Grimontia hollisae CIP 101886] gi|262221212|gb|EEY72526.1| exodeoxyribonuclease III [Grimontia hollisae CIP 101886] Length = 300 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 84/311 (27%), Gaps = 74/311 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++S+NIN L + L+ + D++ LQE+ ++ Sbjct: 32 SMKVISFNINGL----------------RARLHQLQALIEKHQPDVIGLQEIKVHDEA-- 73 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + H +A+ K V Q +D+ Sbjct: 74 --------FPVEDVEAMGYKVYFHGQKAHYGVAMLCKQTPVRVQKGFPTDGEDA-----Q 120 Query: 143 RRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 RR + + +G ++ VL+ F + + Q L ++ + Sbjct: 121 RRMIMATFKQEDGSEVTVLN-----GYFPQGENIEHETKFPAKRKFYQDLMTYLNASHTN 175 Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240 ++ GD N ++ + T+ + F ++ Sbjct: 176 DEKLIVMGDINISPLDLDIGIGEVNRKRWLKTGKCSFQPEEREMLATLMNWGFVDTFRQQ 235 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 N + ID + + I D ++ Sbjct: 236 YPDVDNKFSWFDYRSRGFDDNRGLRIDVILATPSLAVDCIDTGI-------DYELRGIEK 288 Query: 292 LSDHCPISIDY 302 SDH PI + Sbjct: 289 PSDHAPIWATF 299 >gi|261401182|ref|ZP_05987307.1| exodeoxyribonuclease III [Neisseria lactamica ATCC 23970] gi|269208860|gb|EEZ75315.1| exodeoxyribonuclease III [Neisseria lactamica ATCC 23970] Length = 256 Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 88/305 (28%), Gaps = 73/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + DI+ LQE Sbjct: 1 MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ +N S R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVHF-----GLPSLPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V++++ + LDS + Y Q L +++ + Sbjct: 90 RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRYG 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D +++ + + Sbjct: 140 KLVLLGDFNIAPADADCYDPKKWYEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ + L D +R SDH P++ Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMAEALKDV-------RVDLDTRALERPSDHAPVT 251 Query: 300 IDYDF 304 ++D+ Sbjct: 252 AEFDW 256 >gi|327539872|gb|EGF26475.1| endonuclease/exonuclease/phosphatase family protein [Rhodopirellula baltica WH47] Length = 286 Score = 99.2 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 87/303 (28%), Gaps = 56/303 (18%) Query: 5 YVLALVFFLVPCTASVAQKV----RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 ++A+ + S A++ R++S+NI +G +D + Sbjct: 30 LLIAIATLIAMPGESSAEETNSSHRVLSYNIKRGYGNDG-----------KTDLPRTAEV 78 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 L D V LQE+ + + W + D + +A+ + Sbjct: 79 ISKLKPDFVGLQEVDERCNRSGKVDQAQWLGEHLDMHAAFAPFMD-YDGGRYGMAILSRY 137 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSP 179 +S L + R A+ V +G K+ ++++H Y Sbjct: 138 PIEKTESVELARGR------EPRVALAAHVTLPDGNKLTLVNVHF-----------DYIR 180 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 ++ +QA ++++I P ++ GDFN ++ + Sbjct: 181 DDTVRFEQATKVREFIQSLSN---PAILLGDFNDTPESRTVQLFQDGFVEADKPAD---- 233 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ + + SDH P+ Sbjct: 234 ----DSFTFSAEKPDREIDFLFASPETQWTVKTVDVIDEPL-----------ASDHRPVM 278 Query: 300 IDY 302 Sbjct: 279 AVL 281 >gi|156974066|ref|YP_001444973.1| hypothetical protein VIBHAR_01777 [Vibrio harveyi ATCC BAA-1116] gi|156525660|gb|ABU70746.1| hypothetical protein VIBHAR_01777 [Vibrio harveyi ATCC BAA-1116] Length = 446 Score = 99.2 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 47/291 (16%), Positives = 92/291 (31%), Gaps = 36/291 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 Q ++LV++NI L Y L+ +Y K D+V LQE+ + A Sbjct: 180 QHLKLVTYNIWALPAVASHIGD---------RYELIPEYVKGY--DVVALQEVFADGREA 228 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + + +D I R V Q +P + D F+ Sbjct: 229 FLRELAKEYPYQTKMLDKD---GFNIHDGGVTIVSRYPIVNQAQYVFPDCSSTDCFADK- 284 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + G+ V H S + E+ +Q + + + + Sbjct: 285 --GINYAEIIKGGQAYHVFATHAASSDTDIAREHRQRQ-----FKQMRAMAKSLN--IPA 335 Query: 202 LVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--------- 251 V +GDFN + + G+ + + + S + N Sbjct: 336 NETVVYSGDFNVNKLKFPGDYQQMIANLSAVEPE--YSGYTASTFDPRINNFAGKALSGG 393 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +DY ++ ++ ++ + + LSDH P+S Sbjct: 394 DNVEYLDYVMVSSEYGAKSFNDNRVDVPRSTAASLWKHYNLSDHFPVSTVL 444 >gi|269926406|ref|YP_003323029.1| Endonuclease/exonuclease/phosphatase [Thermobaculum terrenum ATCC BAA-798] gi|269790066|gb|ACZ42207.1| Endonuclease/exonuclease/phosphatase [Thermobaculum terrenum ATCC BAA-798] Length = 271 Score = 99.2 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 37/290 (12%), Positives = 80/290 (27%), Gaps = 37/290 (12%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + +R++S+N+ ++G + W + + + + D++ QE+ N Sbjct: 9 SADIRVMSFNVRGAVHKDGENAWDHRASLN-------LRTILSNNPDLIGFQEVQEGN-- 59 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD----- 135 + ++ I + AI +K + + L Sbjct: 60 -----LQKYQEMRDYDKYIGLQYGAREPWEYAAIYWKKDKLERINSGGFWLNEDCTQMGL 114 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + A R A L E + + L Q + + Sbjct: 115 GWDAACIRVATWCLFEHKASGLRFFHFNTHL---DHEGRTARVEGTKKLLSQIESI---- 167 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-- 253 + P +I GDFN ++K+ + Sbjct: 168 ---VPNRFPVLITGDFNCTPETEPYKLFMDAGFKDAYLEAGCMEDKEGFTFHRFTGKPTH 224 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID+ ++ ++ I+ ++ D SDH P+ D Sbjct: 225 SGRIDWILVRDGNARWYIRS------FHLDRTGEPPIFPSDHFPLIADLS 268 >gi|313158069|gb|EFR57474.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 297 Score = 99.2 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 82/313 (26%), Gaps = 41/313 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 ++K + L+F A+ ++ ++L+S+NI + + + + Sbjct: 16 MKKLLFTLLFCAAAAAAAGSEPAELKLLSYNIRYIGAPGDEGDFA-----WDARKEASIR 70 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 +++ D++ QE V + + I +R++ Sbjct: 71 MIRDVRPDVIGFQEPRRQQVAYLVEQLPEYGHIEMGRDFGAKDDPGEHLMIMY---LRER 127 Query: 120 NVRVLQQSYPLLGAKDS----FSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSL 173 + Y L D + R V + G++ + D HL L Sbjct: 128 YELLDHGHYWLSETPDEVSQGWDGRCRRVTVWARLRDRATGREFCLFDTHLDHIGKTARL 187 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPN 231 E + P I GD N G + ++K + Sbjct: 188 EGARLNVERMR------------SIAGKRTPQFIVGDMNATAGTPGGVCLEPYFKWLKSA 235 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + ID+ D + Sbjct: 236 CEEAPLTD--PRPTYHGFGKAKPLHIDHIFYRCAEPLRYQL---------LDSTGYGVQY 284 Query: 292 LSDHCPISIDYDF 304 LSDH PI + F Sbjct: 285 LSDHYPIVCTFRF 297 >gi|167033891|ref|YP_001669122.1| exonuclease III [Pseudomonas putida GB-1] gi|166860379|gb|ABY98786.1| exodeoxyribonuclease III [Pseudomonas putida GB-1] Length = 270 Score = 99.2 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 34/313 (10%), Positives = 82/313 (26%), Gaps = 76/313 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V +NIN L + L + D++ LQE + Sbjct: 1 MKIVCFNINGL----------------RARPHQLAALIEKHQPDVIGLQETKVSDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + H +A+ + + D+ R Sbjct: 41 ------QFPLADVQALGYHVHYHGQKGHYGVALLSRQAPLSLHKGFATDEDDA-----QR 89 Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + +G I +++ F + + L+ + + + Sbjct: 90 RFIWGTFPDADGNPITIMN-----GYFPQGESRDHPTKFPAKQRFYSDLQALLEGQFRND 144 Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241 P ++ GD N ++L ++ + + + F Sbjct: 145 QPLLVMGDMNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKGWGLVDSFRHLY 204 Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + Q+ + D + Sbjct: 205 PEVTDRFSWFDYRSRGFEDDPKRGLRIDLIMASQHLVPRIKAAGV-------DYELRAME 257 Query: 291 RLSDHCPISIDYD 303 + SDH PI ++ Sbjct: 258 KPSDHAPIWLELS 270 >gi|51596420|ref|YP_070611.1| exonuclease III [Yersinia pseudotuberculosis IP 32953] gi|108807521|ref|YP_651437.1| exonuclease III [Yersinia pestis Antiqua] gi|108811797|ref|YP_647564.1| exonuclease III [Yersinia pestis Nepal516] gi|145598263|ref|YP_001162339.1| exonuclease III [Yersinia pestis Pestoides F] gi|149365909|ref|ZP_01887944.1| exodeoxyribonuclease III [Yersinia pestis CA88-4125] gi|153949149|ref|YP_001400949.1| exonuclease III [Yersinia pseudotuberculosis IP 31758] gi|161484800|ref|NP_669464.2| exonuclease III [Yersinia pestis KIM 10] gi|161511386|ref|NP_993308.2| exonuclease III [Yersinia pestis biovar Microtus str. 91001] gi|162420660|ref|YP_001606769.1| exonuclease III [Yersinia pestis Angola] gi|165927745|ref|ZP_02223577.1| exodeoxyribonuclease III [Yersinia pestis biovar Orientalis str. F1991016] gi|165939329|ref|ZP_02227877.1| exodeoxyribonuclease III [Yersinia pestis biovar Orientalis str. IP275] gi|166009140|ref|ZP_02230038.1| exodeoxyribonuclease III [Yersinia pestis biovar Antiqua str. E1979001] gi|166210881|ref|ZP_02236916.1| exodeoxyribonuclease III [Yersinia pestis biovar Antiqua str. B42003004] gi|167401408|ref|ZP_02306905.1| exodeoxyribonuclease III [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420251|ref|ZP_02312004.1| exodeoxyribonuclease III [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426574|ref|ZP_02318327.1| exodeoxyribonuclease III [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469881|ref|ZP_02334585.1| exodeoxyribonuclease III [Yersinia pestis FV-1] gi|170024319|ref|YP_001720824.1| exonuclease III [Yersinia pseudotuberculosis YPIII] gi|186895466|ref|YP_001872578.1| exonuclease III [Yersinia pseudotuberculosis PB1/+] gi|218929268|ref|YP_002347143.1| exonuclease III [Yersinia pestis CO92] gi|229894844|ref|ZP_04510024.1| exonuclease III [Yersinia pestis Pestoides A] gi|229897588|ref|ZP_04512744.1| exonuclease III [Yersinia pestis biovar Orientalis str. PEXU2] gi|229898233|ref|ZP_04513381.1| exonuclease III [Yersinia pestis biovar Orientalis str. India 195] gi|229902093|ref|ZP_04517214.1| exonuclease III [Yersinia pestis Nepal516] gi|270490729|ref|ZP_06207803.1| exodeoxyribonuclease III [Yersinia pestis KIM D27] gi|294503787|ref|YP_003567849.1| exodeoxyribonuclease III [Yersinia pestis Z176003] gi|51589702|emb|CAH21332.1| exodeoxyribonuclease III [Yersinia pseudotuberculosis IP 32953] gi|108775445|gb|ABG17964.1| Exodeoxyribonuclease III [Yersinia pestis Nepal516] gi|108779434|gb|ABG13492.1| Exodeoxyribonuclease III [Yersinia pestis Antiqua] gi|115347879|emb|CAL20799.1| exodeoxyribonuclease III [Yersinia pestis CO92] gi|145209959|gb|ABP39366.1| Exodeoxyribonuclease III [Yersinia pestis Pestoides F] gi|149292322|gb|EDM42396.1| exodeoxyribonuclease III [Yersinia pestis CA88-4125] gi|152960644|gb|ABS48105.1| exodeoxyribonuclease III [Yersinia pseudotuberculosis IP 31758] gi|162353475|gb|ABX87423.1| exodeoxyribonuclease III [Yersinia pestis Angola] gi|165912670|gb|EDR31299.1| exodeoxyribonuclease III [Yersinia pestis biovar Orientalis str. IP275] gi|165920359|gb|EDR37636.1| exodeoxyribonuclease III [Yersinia pestis biovar Orientalis str. F1991016] gi|165991695|gb|EDR43996.1| exodeoxyribonuclease III [Yersinia pestis biovar Antiqua str. E1979001] gi|166208061|gb|EDR52541.1| exodeoxyribonuclease III [Yersinia pestis biovar Antiqua str. B42003004] gi|166961946|gb|EDR57967.1| exodeoxyribonuclease III [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049104|gb|EDR60512.1| exodeoxyribonuclease III [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054450|gb|EDR64262.1| exodeoxyribonuclease III [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750853|gb|ACA68371.1| exodeoxyribonuclease III [Yersinia pseudotuberculosis YPIII] gi|186698492|gb|ACC89121.1| exodeoxyribonuclease III [Yersinia pseudotuberculosis PB1/+] gi|229680989|gb|EEO77084.1| exonuclease III [Yersinia pestis Nepal516] gi|229688799|gb|EEO80867.1| exonuclease III [Yersinia pestis biovar Orientalis str. India 195] gi|229693925|gb|EEO83974.1| exonuclease III [Yersinia pestis biovar Orientalis str. PEXU2] gi|229702317|gb|EEO90336.1| exonuclease III [Yersinia pestis Pestoides A] gi|262362092|gb|ACY58813.1| exodeoxyribonuclease III [Yersinia pestis D106004] gi|262365769|gb|ACY62326.1| exodeoxyribonuclease III [Yersinia pestis D182038] gi|270339233|gb|EFA50010.1| exodeoxyribonuclease III [Yersinia pestis KIM D27] gi|294354246|gb|ADE64587.1| exodeoxyribonuclease III [Yersinia pestis Z176003] gi|320015154|gb|ADV98725.1| exonuclease III [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 268 Score = 99.2 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 79/310 (25%), Gaps = 73/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + H +A+ K + + +D+ R Sbjct: 42 FP-------LEDVSQHGYHVFYHGQKGHYGVALLTKEQPLAVRRGFPSDEEDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + ++ L+ ++ ++ Sbjct: 90 RIIMADLATPQGTLTVIN-----GYFPQGESRDHPIKFPAKARFYADLQRYLEEQLSPEA 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 +I GD N L ++ + + + F Sbjct: 145 QVLIMGDLNISPTDLDIGIGEDNRKRWLRTGKCSFLPEEREWLERLQNWGLVDTFRAANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q I D ++ S Sbjct: 205 DCNDHFSWFDYRSRGFDENRGLRIDLLLASQPLAARCIATGI-------DYAIRGMEKPS 257 Query: 294 DHCPISIDYD 303 DH P+ ++ Sbjct: 258 DHAPVWSEFS 267 >gi|119485388|ref|ZP_01619716.1| Endonuclease/exonuclease/phosphatase [Lyngbya sp. PCC 8106] gi|119457144|gb|EAW38270.1| Endonuclease/exonuclease/phosphatase [Lyngbya sp. PCC 8106] Length = 1127 Score = 99.2 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 91/348 (26%), Gaps = 64/348 (18%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------------TSDYTLLRQYAK 62 V +++ S N+ VS S + L + Sbjct: 646 ATPEDVGGDLKVASLNVLNFFTTLDVSGNPGSGPNSLSPRGADNQAEFDRQLEKLVTTLE 705 Query: 63 NLDADIVFLQEMGSY-----------------NAVAKVFPKNTWCIFYSTERLINHSKRD 105 ++DAD+V L E+ + N + T+ ++ Sbjct: 706 DIDADVVGLVELENEFGGDQNGDGQFAIDTLVNELNNRVGAGTYAYVDPGVPFVDTGDAI 765 Query: 106 SNNDIH----TAIAVRKKNVRVLQQSYPLLGAKDSFSRA--GNRRAVELLVE--INGKKI 157 S I+ IA + P LG + NR + + E G+ Sbjct: 766 SVGAIYKTNSVQIAPGTSVEILTDSDLPALGLGGTVFDGVDTNRAPLAVSFEELSTGEVF 825 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCS-----LLSQQAQWLKDWITQKK--ESLVPFVIAGD 210 + H KS S +N + A+ L W+ F+I GD Sbjct: 826 TLAVNHFKSKGGTGSGDNADIGDGQGNFNGTRLRGAEALDAWLNSDPTGSGDSDFLIVGD 885 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 N ++ + + +DY + +Q+ + Sbjct: 886 LNAYAQEDPI-----TFLEAEGYTDLIEEFVGDDAYSFVFDGQFGYLDYGLANQSLLSQV 940 Query: 271 IQESFSEILYNEDDIKSRG---------------KRLSDHCPISIDYD 303 + + +E D R SDH P+ I D Sbjct: 941 TGTTEWHVNADEPDAFDYNLDFGRDPSLFDGQDPFRNSDHDPVIIGLD 988 >gi|313887293|ref|ZP_07820984.1| endonuclease/exonuclease/phosphatase family protein [Porphyromonas asaccharolytica PR426713P-I] gi|312923212|gb|EFR34030.1| endonuclease/exonuclease/phosphatase family protein [Porphyromonas asaccharolytica PR426713P-I] Length = 360 Score = 99.2 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 87/349 (24%), Gaps = 59/349 (16%) Query: 3 RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNS-----------VKRTT 51 R +VL + Q+ +VS+N+ L + + W + +R Sbjct: 20 RGFVLFFLLLGSGYCLVAQQRFTIVSYNVENLFDTIPSTRWDDREYLPTARKGWTAERMK 79 Query: 52 SDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107 L + + ++ LQE+ S A+ ++ S R Sbjct: 80 RKCHQLAEVISHATAWDIPALLALQEVESVEALEQLAHHTLLRGGNYKTICATGSDR--- 136 Query: 108 NDIHTAIAVRKKNVRVLQ-QSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLK 165 H A+ V Q + +PL DS R + + + + + HL Sbjct: 137 RGSHVALLYDADRFAVEQTEEWPLRITPDSIY--PTRNLLFVSGRLPSAAPLSFIVCHLP 194 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-- 223 S + E + +L + L V+ GDFN + Sbjct: 195 SRRGGATAEAARAALIEMLRMRTDSLLR-----ANPEQSIVVVGDFNATPEDGLTDSWAA 249 Query: 224 ----FWKTIDPNDSLIRFPKEKDS-----RCNANKNLRNKIPIDYFVMDQNAYKFL---- 270 + D + P D + ID + + Sbjct: 250 SYHTYLSQSDSLAMVDLTPPFTDEQLKTMPPGSYYYRGYWERIDRLFVSRTLLTETRYPH 309 Query: 271 -----------------IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + S SDH P+ Sbjct: 310 LELETVRIALPPQKYMHESPAPWGRPRRTYGGDSYLAGPSDHLPLVATL 358 >gi|291613446|ref|YP_003523603.1| endonuclease/exonuclease/phosphatase [Sideroxydans lithotrophicus ES-1] gi|291583558|gb|ADE11216.1| Endonuclease/exonuclease/phosphatase [Sideroxydans lithotrophicus ES-1] Length = 247 Score = 99.2 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 52/288 (18%), Positives = 94/288 (32%), Gaps = 52/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--- 79 +++ ++NI+ S LR+ + LDADIVFLQE+ +A Sbjct: 3 TLKIATYNIH----------KGFSQFNRRVVLHELRERLRELDADIVFLQEVQGEHAGHV 52 Query: 80 -VAKVFPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 +P F + E +H+ ++ H AV + + S Sbjct: 53 QRHADYPAEPQHEFLADEFWAHHAYGMNAVYDEGHHGNAVLSRFPILQA-----FNKDVS 107 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R +R + VEI G+ + L H F Q + L +++ Sbjct: 108 AHRFESRGLLHCEVEIGGQLVHCLCAHFGLFAKGQ-------------RAQMRALVEYVL 154 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-RCNANKNLRNKI 255 P VIAGDFN + + + + ++ + + Sbjct: 155 NDIPKDAPLVIAGDFNDW------RNQLSRALAKEIGVQDVFGLQEGKPARSFPSRIPVF 208 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D + + Y + I + +RLSDH +S + Sbjct: 209 RLDRIYVRG-----------FSVQYCDVHIGGKWRRLSDHAALSAQLE 245 >gi|294625453|ref|ZP_06704084.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664696|ref|ZP_06730028.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292600276|gb|EFF44382.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605521|gb|EFF48840.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 299 Score = 99.2 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 54/287 (18%), Positives = 92/287 (32%), Gaps = 36/287 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 A+ ++++ LV+ N++ E + + + K L D++ LQE+ Sbjct: 39 SPATASREMTLVTLNLHHDRED------------WPARRAHIAKELKRLAPDVIALQEVI 86 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 V + W S A+ + + L D Sbjct: 87 ERRG--GVENQAAWLARKLGYDYTFASVDPVGAPKRYGNALLSRRRVLATHQRLLQPLDD 144 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R A L V+++G+ + V HL E + + ++Q L D+I Sbjct: 145 Y------RVAAHLQVDVDGQPVNVYVTHLN--------ERADARGTGIRTRQVADLLDFI 190 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + P VIAGDFN + L D S+ R S N + R Sbjct: 191 ASN-SAQAPVVIAGDFNTAADTLDLQALRRGYGDSYGSVHRNSDATVSTLNMHVFDR-PA 248 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ QN + Y + G+ SDH + + Sbjct: 249 RIDHVFFQQNRLLAREARILFDTPY------AEGRWASDHYGVWVRL 289 >gi|289671214|ref|ZP_06492289.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 303 Score = 99.2 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 88/287 (30%), Gaps = 36/287 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 +++ +++ LV+ N++ E + + + K L D++ LQE+ Sbjct: 40 PSSTAPREMTLVTLNLHHDRED------------WPARRAYIAKELKQLAPDVIALQEVI 87 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 V + W S A+ + + L D Sbjct: 88 ERRG--SVENQAAWLARKLGYDYTFASVDPVGAPKRYGNALLSRRNVLATHQRLLQPLDD 145 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R A L V+++G+ + V HL E T + + +Q L D++ Sbjct: 146 Y------RVAAHLQVDVDGQPVNVYVTHLN--------ERTDARGTATRKRQVTDLLDFV 191 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 P VIAGD N + L D S+ R S N Sbjct: 192 ASN-SEQAPVVIAGDLNTAADTLDLEALRKGYGDSYGSVHRNSDATVSTLNMQV-FDKPA 249 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ QN + Y E G+ SDH + + Sbjct: 250 RIDHVFFQQNRLLAREARILFDTPYAE------GRWASDHYGVWVRL 290 >gi|152967558|ref|YP_001363342.1| endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans SRS30216] gi|151362075|gb|ABS05078.1| Endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans SRS30216] Length = 868 Score = 99.2 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 46/318 (14%), Positives = 91/318 (28%), Gaps = 38/318 (11%) Query: 16 CTASVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 +V V++ ++N+ N G S + + L AD+V L E+ Sbjct: 450 APEAVGGDVQVGAFNVLNYFLTLGGAGRGATSQAELEEQAGKIVPAIRALGADVVTLMEI 509 Query: 75 GSY--------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + + ++ + + I AI ++ Sbjct: 510 EDTASTGRNPGNADLALEDLVRRLNTAAGSQEWAYVPMPAELYAVDRDVIRNAIIYKQDV 569 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 V+ + + G D + R + +G V+ H KS + +N + Sbjct: 570 VQPVGEPV---GLVDETVWSNAREPIAQTFVKDGDAFTVVADHFKSKGGTGTGDNADTGQ 626 Query: 181 CSL---LSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 S +QAQ L ++ + + V GDFN + + L+ Sbjct: 627 GSFNGDRVRQAQSLAGFLARLRESTGDADVVALGDFNAYTQEDPIE-----VLRTDAGLV 681 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289 + D+ + +D+ + + + I E Sbjct: 682 DLGERFDAGRYSYVFDALSGSLDHALASAELTAKVTDATHWNINSVESFAYQYTGDPALY 741 Query: 290 ----KRLSDHCPISIDYD 303 R SDH P+ D Sbjct: 742 APNPYRSSDHDPVVFGID 759 >gi|313157885|gb|EFR57291.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 344 Score = 99.2 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 36/348 (10%), Positives = 84/348 (24%), Gaps = 56/348 (16%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSE-------QEGVSLWKNSVKRTTSD 53 M ++ + L + +++ +N+ + + + K ++ Sbjct: 1 MKKRLIFTLFLAAFVVMCFAQKPCKVMFYNLENFFDTINDPEVHDDEFTPEGPKKWNSAK 60 Query: 54 Y-------TLLRQYAKNLD---ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103 Y + D ++ + E+ + + + + I H Sbjct: 61 YFKKLGNIERVLFDIAAADKNYPAVIGVSEVETRSVLEDIVATPK---LAPGNYRIVHYD 117 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 + A R ++ S+P+ R + + I + + + H Sbjct: 118 SPEARGVDVAFMYRPDVFKLE-GSFPVKTVVPQLPNFKTRDILTMWGTIENEPFFFMVAH 176 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-- 221 S + +Q + + D + + + V GDFN Sbjct: 177 WPSRLGGKDASEFKRIAV---GEQMRRIADSVLKINPATK-VVAMGDFNDDPTDESIAEG 232 Query: 222 ---DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK---------- 268 K + P D F + D V+ +N Sbjct: 233 LGAKAKMKDLKPGDFYNPFADMLKAGLGTLAYGDAWNLFDNIVVTENLATGSEGRLRLQK 292 Query: 269 ----------------FLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + + SDH P+ I Sbjct: 293 APGSKFYGNIFKRYYMLQKEGQYKGYPLRTYVGNNFQGGYSDHFPVYI 340 >gi|302566051|pdb|3I5V|A Chain A, Crystal Structure Of Beta Toxin 275-280 From Staphylococcus Aureus gi|302566052|pdb|3I5V|B Chain B, Crystal Structure Of Beta Toxin 275-280 From Staphylococcus Aureus gi|302566053|pdb|3I5V|C Chain C, Crystal Structure Of Beta Toxin 275-280 From Staphylococcus Aureus gi|302566054|pdb|3I5V|D Chain D, Crystal Structure Of Beta Toxin 275-280 From Staphylococcus Aureus Length = 313 Score = 99.2 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 91/294 (30%), Gaps = 28/294 (9%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++LVS N+ LS L+ N + +D Y K + D+V E A K Sbjct: 29 DLKLVSHNVYMLST----VLYPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDK 82 Query: 83 VFPKNTWCIFYSTE--------RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + Y T S +A+ K + + Sbjct: 83 LLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC 142 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 F N+ V +E NGK + V+ H +S DS + ++Q + + D+ Sbjct: 143 -GFDNDSNKGFVYTKIEKNGKNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDF 197 Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNAN 248 + + I GD N D K ++ ND L N Sbjct: 198 VKKKNIPKDETVYIGGDLNVN-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYN 256 Query: 249 KNLRNKIPIDYFVMDQNAYK--FLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +DY D++ + L+ E +E D SDH PI Sbjct: 257 YPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVDGYVYNDFSDHYPIKA 310 >gi|118589109|ref|ZP_01546516.1| exodeoxyribonuclease III [Stappia aggregata IAM 12614] gi|118438438|gb|EAV45072.1| exodeoxyribonuclease III [Stappia aggregata IAM 12614] Length = 260 Score = 99.2 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 84/302 (27%), Gaps = 67/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + + ++ K D+ LQE+ S + Sbjct: 1 MKIATWNING----------------VKARIDTVLEWLKEASPDVACLQEIKSVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ +A+ K Q D +R Sbjct: 41 ------NFPRQPFEDLGYAVETHGQKGFNGVALLSKTPLDDIQRGLPGNDADEQARY--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + + + ++L + L + + +Y + L ++ E Sbjct: 92 --IEARLATEKGPVRIGCLYLPNGNPLGTEKFSYK------LEWMDRLITHAQKRLEEET 143 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF++ GD+N + + + ++ + ++ Sbjct: 144 PFLLLGDYNVIPDPVDAKNPQNWLEDALFQPESRQRFRALTHLGLTEAVRSCTEAPETFT 203 Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 N I ID+ +M A D ++ SDH P+ + Sbjct: 204 FWDYQAGAWQKNNGIRIDHILMSPQATDRFSGCGI-------DKHVRGWEKPSDHVPVWV 256 Query: 301 DY 302 Sbjct: 257 KL 258 >gi|327313721|ref|YP_004329158.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola F0289] gi|326945022|gb|AEA20907.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola F0289] Length = 371 Score = 99.2 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 40/332 (12%), Positives = 90/332 (27%), Gaps = 46/332 (13%) Query: 3 RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSE-------QEGVSLWKNSVKRTT---- 51 + +L LVF L+ ++ ++ +V N L + + L + T Sbjct: 47 MRTLLILVFTLLSVPSAAQSRLTIVELNAENLFDTRHDTLKNDYEFLPDSPRHWTRTKYW 106 Query: 52 SDYTLLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103 Q DIV L E+ + + + + ++ + + Sbjct: 107 EKLNRTGQTIIACGEDSSGWHLPDIVGLCEVENDSVLFDLTRRS-----LLRKARYEYVM 161 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDI 162 S++ +A+ + R + + EI NG + V + Sbjct: 162 TASDDRRGIDVALLYSPFSFRLIKADTIHVAPMADMRPTRDILHVEGEIENGDTLHVFLL 221 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 H S + + + L QA + + ++ GDFN + Sbjct: 222 HAPSRMGGERYSRPFRLYVAGLLCQAVDSLRSL----YADPRILVMGDFNDYADSPSVRL 277 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS------ 276 + + + + +D ++ +N ++I Sbjct: 278 LCTRGFVN---VSARAHGNNGAKGTYRYHGAWGSLDQILVSENLCPWVISCHVHDAAFLL 334 Query: 277 --------EILYNEDDIKSRGKRLSDHCPISI 300 + SDH P+ + Sbjct: 335 EEDDKYGGVKPRRNYNGMRYNNGFSDHLPLVL 366 >gi|90412320|ref|ZP_01220325.1| hypothetical protein P3TCK_09808 [Photobacterium profundum 3TCK] gi|90326811|gb|EAS43204.1| hypothetical protein P3TCK_09808 [Photobacterium profundum 3TCK] Length = 286 Score = 99.2 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 35/281 (12%), Positives = 74/281 (26%), Gaps = 22/281 (7%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++S+NI S+ + + ++ + DI LQE + + Sbjct: 19 DDFNVMSFNIRN-SKDSVDGSVYDGNNTWENRKEIVSSIFSEQNIDIAGLQEAFNDQIIY 77 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + V+ P + A + Sbjct: 78 LARNLSNYGWVGVGRDDGKTKGEAVPIFYRADKYVKLGGGTFWLSETPEVVASVGWDADL 137 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + +E VL + F + S LLS++A+ + + Sbjct: 138 TRITSWVRLEDKESSKRVLVFNAH---FDHIGKVARQQSAKLLSKKAKEIIG------DD 188 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR---CNANKNLRNKIPID 258 ++ GD N + + + + + + S P E ID Sbjct: 189 NDAVIVLGDLNFERSDVASYEALTSLFNDARSTTIKPFEGIDGKEYTYHGYFKEPTEDID 248 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 Y ++ + ++ G SDH + Sbjct: 249 YIFVNDKL---------RVNTFKYVNVIKDGIYSSDHLSVI 280 >gi|70732721|ref|YP_262484.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens Pf-5] gi|68347020|gb|AAY94626.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens Pf-5] Length = 358 Score = 99.2 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 46/340 (13%), Positives = 94/340 (27%), Gaps = 71/340 (20%) Query: 12 FLVPCTASVA-----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTS--------DYTLLR 58 V C+A A Q +++++WN+ L+ + V + + Sbjct: 36 LAVNCSAQAAPLVPGQALKVMTWNLQYLAGKRYVFWNDQAQGEDEQPTLEDMAFSLDEVA 95 Query: 59 QYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINHSKR 104 + ++ D+V LQE+ + + ++P +T + + + + Sbjct: 96 RVIRDEQPDLVLLQEVDNGAKASAYQDQLKLLQERLTDLYPCSTQAYDWKADFVPSP-HI 154 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDI 162 + A R + + P + R A+ L +G ++ VL+ Sbjct: 155 FGSVGRQLATLSRYRIDHAERLQLPTAEHGFIGRQFQPREALLLSYLPLNDGGQVAVLNT 214 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------- 212 HL S+Q + + + + P++I GDFN Sbjct: 215 HL----------ERARTPGQTQSRQVAAIGKVLDKLEGRGTPWLIGGDFNLLPLGQYQRL 264 Query: 213 -----RKINYLGNNDDFWK---TIDPNDSLIRFPKEKDSRCNAN--KNLRNKIPIDYFVM 262 + W I N + N +DY Sbjct: 265 SDVQRAPYSADSPLHLLWDKYPMIPSNTQASGVDRAHWLTHYPNDPSLDGPDRTVDYLFY 324 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + R+SDH P+ + Sbjct: 325 SPRLK-----------RVESRVRQDDTLRISDHLPVLARF 353 >gi|15602556|ref|NP_245628.1| exonuclease III [Pasteurella multocida subsp. multocida str. Pm70] gi|12720975|gb|AAK02775.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 267 Score = 99.2 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 33/311 (10%), Positives = 83/311 (26%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++S+NIN L + L + D++ LQE + Sbjct: 1 MKVISFNINGL----------------RARPHQLEAVIEKYQPDVLGLQEIKVADEMFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + +F+ H +A+ K + ++++ R Sbjct: 45 ELVEHLGYHVFHH------------GQKGHYGVALLTKQAPKAVRKGFPTDSEEAQKR-- 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +E + + V++ F + + L+ ++ Q + Sbjct: 91 ---IIMADLETDFGLLTVIN-----GYFPQGESRDHETKFPAKEKFYADLQQYLEQDHNA 142 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 P +I GD N L ++ + + F Sbjct: 143 NNPIIIMGDMNISPTDLDIGIGDENRKRWLRTGKCSFLPEEREWMNRLYGYGLVDTFRHL 202 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID+ + + ++ ++ Sbjct: 203 NPDVNDQFSWFDYRSKGFDDNRGLRIDHIIANHALAARCVETGI-------ALDIRAMEK 255 Query: 292 LSDHCPISIDY 302 SDH P+ + Sbjct: 256 PSDHAPVWAVF 266 >gi|189465293|ref|ZP_03014078.1| hypothetical protein BACINT_01641 [Bacteroides intestinalis DSM 17393] gi|189437567|gb|EDV06552.1| hypothetical protein BACINT_01641 [Bacteroides intestinalis DSM 17393] Length = 284 Score = 99.2 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 88/309 (28%), Gaps = 43/309 (13%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 ++A V + C+ KV ++S+NI + +S+ Q Sbjct: 8 SVLVAFVLLVASCSKQPEAKVDVMSFNIR-------LDHVADSLNNWKYRKDAAAQMIIY 60 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 D+V +QE+ + + + T K+ Sbjct: 61 YAPDVVGMQEVLKNQLDDLKNRLPQYTVLGVGRADGKEKGEYCSLFYKTDRFDLMKSGNF 120 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 P + A R ++ +++GK++ + H F + S Sbjct: 121 GLSETPDSIGIKGWDAACERIVTWAVLKDKVSGKELAAFNTH-----FDHIGKVARRESA 175 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 LL + + + S +P VI GDFN ++ + + Sbjct: 176 VLLLAKIREIA--------SDLPVVITGDFNGTVDSDPI-----SVLTEGGMQNTYSASD 222 Query: 242 DSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + ID+ ++ ++ F I D+ LSD Sbjct: 223 IVYGPTWSFHDFGRIPVEERQLIDFIFVNGQ----VVANKFRVIADKPDNG-----YLSD 273 Query: 295 HCPISIDYD 303 H PI + Sbjct: 274 HAPIQANLT 282 >gi|261391913|emb|CAX49373.1| exodeoxyribonuclease III (exonuclease III; EXO III) [Neisseria meningitidis 8013] Length = 256 Score = 99.2 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 88/305 (28%), Gaps = 73/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + DI+ LQE Sbjct: 1 MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ +N + R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVH-----IGLPALPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V++++ + LDS + Y Q L +++ + Sbjct: 90 RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRYG 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D ++K + + Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWFKNLLDLGLTDSLRQVHPEGAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ + L D +R SDH P++ Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMVEALKDV-------RVDLETRALERPSDHAPVA 251 Query: 300 IDYDF 304 ++D+ Sbjct: 252 AEFDW 256 >gi|269102062|ref|ZP_06154759.1| exodeoxyribonuclease III [Photobacterium damselae subsp. damselae CIP 102761] gi|268161960|gb|EEZ40456.1| exodeoxyribonuclease III [Photobacterium damselae subsp. damselae CIP 102761] Length = 268 Score = 99.2 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 38/310 (12%), Positives = 87/310 (28%), Gaps = 72/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ + D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQALIEKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K + + G A R Sbjct: 42 -------FPLADVEAMGYKVYHHGQKAHYGVALLCKQEPIEVKK----GFPTDDDDAQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NGKKI +++ F + + L ++ + Sbjct: 91 MIMATFEQENGKKITIMN-----GYFPQGDNINHETKFPAKEKFYADLMTYLNTYHNNDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ + KT+ + F + Sbjct: 146 ELIVMGDINISPIDLDIGIGDNNAKRWLKTGKCSFQPIERQWLKTLLDWGFIDTFRQLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + + ID + + + I+ D ++ S Sbjct: 206 TVDDQYSWFDYRSKGFDDNRGLRIDVILATPSLAERCIESGI-------DYELRGIEKPS 258 Query: 294 DHCPISIDYD 303 DH PI ++ Sbjct: 259 DHAPIWSTFN 268 >gi|157115453|ref|XP_001658213.1| nocturnin [Aedes aegypti] gi|108876911|gb|EAT41136.1| nocturnin [Aedes aegypti] Length = 418 Score = 99.2 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 100/318 (31%), Gaps = 40/318 (12%) Query: 16 CTASVAQKVRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 A+ + ++R+ WN+ TL +G + Q D DI+ LQ Sbjct: 90 AAAANSAQIRIFQWNMLSQTLGMHNDGFVKCPIDALTWECRRYQVIQEIVQNDPDIICLQ 149 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 E+ + + K+ + + + D+N A+ +K + +L +L Sbjct: 150 EVDHFKFLQKILATQNYEGVFFPKPDSPCLYINDNNGPDGCAVFYKKDRLELLNHFTRIL 209 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 S A+ + N ++I V HLK+ + L ++Q + L Sbjct: 210 EVWRVQSNQVAIAALFRTRDTN-QEICVTTTHLKA--------RKGALLSKLRNEQGKDL 260 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYL---------------GNNDDFWKTI-----DPN 231 +I P ++ GDFN + +D + + + Sbjct: 261 LYFIDGVA-EKRPVILCGDFNAEPIEPVYSTVLNYKPLGLGSAYSDLLAQEFPQLAQEND 319 Query: 232 DSLIRFPKEKDSRCNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 +++ + + + + IDY ++ F D Sbjct: 320 QNVVNMAELSAAYEPPYTTWKIREEGEVCHTIDYVFYSKDQITVKNCLMFPAGEEISPDR 379 Query: 286 KSRGKRLSDHCPISIDYD 303 + SDH + D++ Sbjct: 380 TPCYQYPSDHFSLVCDFE 397 >gi|78776910|ref|YP_393225.1| endonuclease/exonuclease/phosphatase [Sulfurimonas denitrificans DSM 1251] gi|78497450|gb|ABB43990.1| Endonuclease/exonuclease/phosphatase [Sulfurimonas denitrificans DSM 1251] Length = 334 Score = 99.2 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 49/351 (13%), Positives = 100/351 (28%), Gaps = 78/351 (22%) Query: 8 ALVFFLVPCTASVAQK-VRLVSWNINTLSEQEGVSLWKN----------SVKRTTSDYTL 56 L F L+ T+ + +++ ++N+ L + E + + K Sbjct: 3 ILFFTLLIYTSLFGETILKIATYNVENLFDLETSGYEYSEYIPNSTSEWNQKNYKIKLKN 62 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + Q K++DADI+ L+E+ S A+ + Y + + +A+ Sbjct: 63 IAQVIKDIDADIIALEEVESLQALLDLRFALKQSGLYY-----GYYSIADKKNTTVKVAL 117 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 K V + + R +E INGK++++ H KS Sbjct: 118 LSKVPFVYSKEISVTQT------YEYRNILETKFNINGKELYIFVNHWKSKSG------- 164 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL------------------ 218 + S A+ L + + ++ GDFN Sbjct: 165 ---AESQRVLCAKSLMKRVKE-IGFDKNIILLGDFNSDYEEYLKFAKKREHNDTDGITGI 220 Query: 219 --------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK-- 268 N + + + + K +D ++ Q+ Sbjct: 221 NHILGTINQRNSALHVNYQKESFYNLWYDTDEDKRYSYLYRGKKEVLDNILISQSLLNAK 280 Query: 269 -----------------FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 F + + K +G+ SDH P+ + Sbjct: 281 DVSYIHNTISNFNKEYLFKKNNIYRWQISKARVKKHKGQGYSDHLPLVARF 331 >gi|123442505|ref|YP_001006482.1| exonuclease III [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089466|emb|CAL12314.1| exodeoxyribonuclease III [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 268 Score = 99.2 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 79/309 (25%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + H +A+ KN + + +D+ R Sbjct: 42 FP-------LEEVSQHGYHVFYHGQKGHYGVALLTKNEPLAIRRGFPTDEEDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + + L+ ++ Q+ + Sbjct: 90 RIIMADIATPQGPLTVIN-----GYFPQGESRDHPIKFPAKERFYADLQQYLEQQLSADA 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 +I GD N L + + + + F Sbjct: 145 QVLIMGDLNISPTDLDIGIGEDSRKRWLRTGKCSFLPEERAWLERLQNWGLVDTFRAANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + I D ++ S Sbjct: 205 DCNDQFSWFDYRSRGFDENRGLRIDLLLASRPLAARCIATGI-------DYDIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ ++ Sbjct: 258 DHAPVWSEF 266 >gi|32476790|ref|NP_869784.1| hypothetical protein RB11105 [Rhodopirellula baltica SH 1] gi|32447336|emb|CAD77162.1| probable secreted protein [Rhodopirellula baltica SH 1] Length = 286 Score = 99.2 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 86/303 (28%), Gaps = 56/303 (18%) Query: 5 YVLALVFFLVPCTASVAQKV----RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 ++A+ + S A++ R++S+NI +G +D Sbjct: 30 LLIAIATLIAMPGESSAEETNSSHRVLSYNIKRGYGNDG-----------KTDLPRTADV 78 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 L D V LQE+ + + W + D + +A+ + Sbjct: 79 ISKLKPDFVGLQEVDERCNRSGKVDQAQWLGEHLDMHAAFAPFMD-YDGGRYGMAILSRY 137 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSP 179 +S L + R A+ V +G K+ ++++H Y Sbjct: 138 PIEKTESVELARGR------EPRVALVAHVTLPDGNKLTLVNVHF-----------DYIR 180 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 ++ +QA ++++I P ++ GDFN ++ + Sbjct: 181 DDTVRFEQATKVREFIRSLSN---PAILLGDFNDTPESRTVQLFQDGFVEADKPAD---- 233 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ + + SDH P+ Sbjct: 234 ----DSFTFSAEKPDREIDFLFASPETQWTVKTVDVIDEPL-----------ASDHRPVM 278 Query: 300 IDY 302 Sbjct: 279 AVL 281 >gi|301311515|ref|ZP_07217442.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] gi|300830601|gb|EFK61244.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] Length = 344 Score = 99.2 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 38/350 (10%), Positives = 96/350 (27%), Gaps = 59/350 (16%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRT 50 ++ ++ L+FF P + A +++++N+ + + + R Sbjct: 1 MKIFMFFLLFFASPPLFAQA-TFKVMTYNVENFFDTRDNPTKNDDEFLPSGNRYWTQSRY 59 Query: 51 TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 + + ++ L E+ + + ++ + + + Sbjct: 60 YHKLQQIAKVISAAGEWSTPALIALCEVENDSVLSHLTRRTPLRWQDYRYIITQSP---D 116 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLK 165 I+ A+ ++ L+ + + R + + + I G + V H Sbjct: 117 PRGINIALLYQRDQFFYLRHESIPIRFSGNKH-KLTRDILHVYGKIITGDTLDVFVCHFP 175 Query: 166 SFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 S + + L + L +I GDFN ++ F Sbjct: 176 SRYGGEKESEKDRFDAARTLRGSSDSLL-----LIREKPQILIMGDFNDTPQDRSISEIF 230 Query: 225 WKTIDPND-----------SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF---- 269 P + + ++K +D +++++ Sbjct: 231 AAQAFPENTQITDSTSCTYYNLFASPYITQFPGSHKYQGEWSQLDQIIVNRDLITQESSM 290 Query: 270 -LIQESFS----------------EILYNEDDIKSRGKRLSDHCPISIDY 302 +I ES + SDH P+ ID+ Sbjct: 291 HIIPESIHIFAPDFLLTKDKTWRGVRPFRTYYGFKYEGGFSDHLPLVIDF 340 >gi|254446687|ref|ZP_05060162.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae bacterium DG1235] gi|198256112|gb|EDY80421.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae bacterium DG1235] Length = 281 Score = 99.2 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 41/287 (14%), Positives = 91/287 (31%), Gaps = 41/287 (14%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++L+++NI + +S + + + + + DIV LQE+ + + Sbjct: 7 EIKLMTFNIAHGRG-LSLYQGFSSARTISKNLDRIAHIIREQQPDIVALQEIDASSHWNG 65 Query: 83 VFPKNTWCIFYSTER---LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + H++RD + A K + + Sbjct: 66 HINLLDYLQSATDYPVSIHGIHNRRDGRKPLAYGNAFLSKFPVKDWKVV-----SFGEKK 120 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 G + +E +G +I V+++HL S +Q L I Q+ Sbjct: 121 LGEKGFLEACFLADGTEIDVINLHLDF------------RSRRTRLRQVDQLIASIHQRS 168 Query: 200 ESLV---PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + P +I GDFN + ++D + I+ + + R Sbjct: 169 LADPYHLPPIICGDFN--TSSRSSSDALHQLIERSAGEEDYHYFPK-RERTFPAHFPSRG 225 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D+ ++ + ++ + SDH P+ Sbjct: 226 LDFILL--------------AAPFEAENTEVIKSFASDHLPVLSTIS 258 >gi|224024500|ref|ZP_03642866.1| hypothetical protein BACCOPRO_01225 [Bacteroides coprophilus DSM 18228] gi|224017722|gb|EEF75734.1| hypothetical protein BACCOPRO_01225 [Bacteroides coprophilus DSM 18228] Length = 340 Score = 98.9 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 37/339 (10%), Positives = 87/339 (25%), Gaps = 49/339 (14%) Query: 1 MI--RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SV 47 MI + ++ L F + K R++ +N+ L + SL + + Sbjct: 1 MISLKTFLSGLALFCALAPSQAQDKFRVMEYNVENLFDCSHDSLKNDYEFQPDSPRGWTK 60 Query: 48 KRTTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103 R + + D+V L E+ + + V + + + Sbjct: 61 ARYYDKLAKIAKVILAAGDKQVPDLVGLCEVENEHCVQDLVKNSPLRDAGYDFAITQS-- 118 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDI 162 + + + + ++ + R R + + I G + V Sbjct: 119 --PDERGIDVVLLYQPATFRHLSTHAIGIPSKEIDRRPTRDILHVSGRIVTGDTLDVFVC 176 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 H+ S + Y + ++A + Q ++ GDFN + + Sbjct: 177 HMPSRSGGEKQSEPYRLFTAGYLRRAADSVMAVRQHPN----VIVMGDFNDYPSNRSIAE 232 Query: 223 DFW--KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ-------NAYKFLIQE 273 + D + + + +D ++ Sbjct: 233 VIGAVRPGDQIEKTRLYNLMDGKEGGTYRYRGEWGTLDQMMVSGYLLEGNERIRAKYEDA 292 Query: 274 SFSEILY--------------NEDDIKSRGKRLSDHCPI 298 + + K SDH P+ Sbjct: 293 QILKFPFLLEEDDRYGGESPSRTYWGKKYHGGYSDHLPV 331 >gi|119356848|ref|YP_911492.1| endonuclease/exonuclease/phosphatase [Chlorobium phaeobacteroides DSM 266] gi|119354197|gb|ABL65068.1| Endonuclease/exonuclease/phosphatase [Chlorobium phaeobacteroides DSM 266] Length = 342 Score = 98.9 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 40/350 (11%), Positives = 89/350 (25%), Gaps = 64/350 (18%) Query: 1 MIRKYVLALVFFLVPCTAS--------VAQKVRLVSWNINTLSE-------QEGVSLWKN 45 M + +F V + + ++ WN L + + + Sbjct: 1 MKKTLSTVFLFLSVILFTAFSSSAKAGAGDSLLVMWWNAENLFDSINDPAVDDDDFTPEG 60 Query: 46 SVKRTTSDYT----LLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFY 93 + T ++ ++ DI+ E + AK + Sbjct: 61 KFRWTEKKLQLKLMRVQHLFNAINSHPQYSAYPDIIAFAETENKKVFAKAIG-----VIK 115 Query: 94 STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153 S + + + I +A + V + D +R + + Sbjct: 116 SGGYKMVYHESGDPRGIDIGLAFNSRKVVFKASKAYQIPVDD----KPSRPVIVAEFSVF 171 Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSP-SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 ++ H S F + +++ A L K S +I GDFN Sbjct: 172 SHPFHIVLNHWPSRAFDIRWTEPKRIGAATVVRHIADSLLQ-----KNSKADIIIMGDFN 226 Query: 213 RKINYLGNNDDFWKTIDPN------DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 + + D + L + + ID ++ Sbjct: 227 DEPENRSLKKVLGSSFDASAVQASRGRLFYNCWADCRGIGSYFYRGHWEKIDQILVSGGL 286 Query: 267 YK----FLIQESFSEILYN------------EDDIKSRGKRLSDHCPISI 300 + +L + +F ++ + SDH P+ + Sbjct: 287 FDRKGLWLPENAFHCFAFSGMMDEGGKKLWPTYEKGVYKGGYSDHLPLLL 336 >gi|53802810|ref|YP_115457.1| exodeoxyribonuclease III [Methylococcus capsulatus str. Bath] gi|53756571|gb|AAU90862.1| exodeoxyribonuclease III [Methylococcus capsulatus str. Bath] Length = 256 Score = 98.9 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 86/303 (28%), Gaps = 72/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + + ++ ++ +QE + Sbjct: 1 MKIATWNVNSL----------------RVRLPQVLDWLDSVQPGVLAVQETKLTDDA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + S + +AV K + P R Sbjct: 42 -------FPVEALRAVGYHAVYSGQKTYNGVAVLSKAPVEDVLTDP------PNLDDPQR 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + ++++++ + + S + Y ++D+I ++ + Sbjct: 89 RILAVTA----GPLRIINLYVPNGSEVGSDKYAYKLD------WLAKVRDFIAEEMAAHP 138 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTI-----------DPNDSLIRFPKEKDSRCNANK 249 V+ GDFN +D K + L + + + Sbjct: 139 HTVVLGDFNIAPEDRDVHDPESWREKILCSTPERDAFRAWAGLGLSDLFRRFEQPEGSFS 198 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ + S D +R SDH P+ Sbjct: 199 WWDYRAAGFRRNLGLRIDHILASLPLAGRCTACSI-------DKTPRSLERPSDHAPVIA 251 Query: 301 DYD 303 ++D Sbjct: 252 EFD 254 >gi|88807632|ref|ZP_01123144.1| exodeoxyribonuclease III [Synechococcus sp. WH 7805] gi|88788846|gb|EAR20001.1| exodeoxyribonuclease III [Synechococcus sp. WH 7805] Length = 276 Score = 98.9 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 85/304 (27%), Gaps = 67/304 (22%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + SWN+N + + + D++ LQE N + Sbjct: 3 IASWNVN----------------SVRTRLGHVLSWLDRHTIDVLALQETKVDNPL----- 41 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 R + + +A+ + + L G + A A Sbjct: 42 -----FPLEPFRERGYDVSIHGQKSYNGVALISRQP-LEDVRLGLTGELPGDADAEALGA 95 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + ++ + V+++++ + L S + +Y L+ ++ + P Sbjct: 96 QKRVISALVDGVRVVNLYVPNGSSLRSEKYSYK------LNWLGCLERYLRSAEARDEPL 149 Query: 206 VIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNANK 249 + GDFN +D + + N + + Sbjct: 150 CVVGDFNIGPEARDLHDPDRLTGGIMASEAEREALHQVLGSNLG--DAFRLFEPGSGHWS 207 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ + ++ + S D + ++ SDH P+ + Sbjct: 208 WWDYRSGAWNRDSGWRIDHIYLSRDLQELARSCSI-------DKQERGREQPSDHAPVMV 260 Query: 301 DYDF 304 D + Sbjct: 261 DLAW 264 >gi|317051122|ref|YP_004112238.1| endonuclease/exonuclease/phosphatase [Desulfurispirillum indicum S5] gi|316946206|gb|ADU65682.1| Endonuclease/exonuclease/phosphatase [Desulfurispirillum indicum S5] Length = 554 Score = 98.9 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 90/296 (30%), Gaps = 28/296 (9%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++N+ G N + LL LDAD+V L EM ++ Sbjct: 271 LRVATFNMENYFVTPGRRGASNQRELQRQRSRLLAA-FHGLDADVVALMEMENHPRA--- 326 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 W + S + + R + A++ + ++ L+G R Sbjct: 327 --LQDWQQWVSRTQSDSREYRVIAGPDPGSDAIQV-VLVYDRKRLELMGVDSLVDGVFQR 383 Query: 144 RAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSP---SCSLLSQQAQWLKDWITQK 198 V G ++ V+ +H KS + + +QQA+ L + Sbjct: 384 HPVVGHFRDRGSDQRFSVIGVHFKSKTRCPAEGDVDLGQGCWNLQRTQQARMLLQQL--G 441 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + F+IAGD N G D + ++ ++ +D Sbjct: 442 SPAESRFLIAGDLNA----YGREDPVRLLQEAGMVNSLGAFDRQTQNYTYIFFGQSGTLD 497 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------KRLSDHCPISIDYDF 304 Y I +E S R SDH P+ D+ F Sbjct: 498 YIFRSSALNDLARGGGIWHINVDEPPFLSYQNPQHSRSDEPWRSSDHDPVWADFAF 553 >gi|153832474|ref|ZP_01985141.1| endonuclease/exonuclease/phosphatase [Vibrio harveyi HY01] gi|148871269|gb|EDL70141.1| endonuclease/exonuclease/phosphatase [Vibrio harveyi HY01] Length = 442 Score = 98.9 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 47/291 (16%), Positives = 90/291 (30%), Gaps = 36/291 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 Q ++LV++NI L Y L+ +Y K D+V LQE+ + A Sbjct: 176 QHLKLVTYNIWALPAVASHIGD---------RYELIPEYVKGY--DVVALQEVFADGREA 224 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + + +D I R V Q +P + D F+ Sbjct: 225 FLRELAEEYPYQTKMLDKD---GFNIHDGGVTIVSRYPIVNQAQYVFPDCSSTDCFADK- 280 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + G+ V H S S +Q + + + + Sbjct: 281 --GINYAEIIKGGQAYHVFATHAAS-----SDTEIAREHRQRQFKQMRAMAKSLN--IPA 331 Query: 202 LVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--------- 251 V +GDFN + + G+ + + + S + N Sbjct: 332 NETVVYSGDFNVNKLKFPGDYQQMIANLSAVEPE--YSGYTASTFDPRINNFAGKALSGG 389 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +DY ++ ++ ++ + + LSDH P+S Sbjct: 390 DNVEYLDYVMVSSEYGAKSFNDNRVDVPRSTAASLWKHYNLSDHFPVSTVL 440 >gi|283785027|ref|YP_003364892.1| exodeoxyribonuclease III [Citrobacter rodentium ICC168] gi|282948481|emb|CBG88070.1| exodeoxyribonuclease III [Citrobacter rodentium ICC168] Length = 268 Score = 98.9 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 83/311 (26%), Gaps = 75/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEDVARLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPDDGEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAELPSPLGNVTVIN-----GYFPQGESRDHPLKFPAKAQFYQNLQNYLDSELKRDN 144 Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 P +I GD N + + + ++ + F Sbjct: 145 PVLIMGDMNISPSDRDIGIGEENRRRWLRTGKCSFLPEEREWMDRLLN-WGLVDTFRHAH 203 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID + Q + ++ D ++ Sbjct: 204 PETNDKFSWFDYRSKGFDDNRGLRIDLLLASQPLAERCVETGI-------DYAIRGMEKP 256 Query: 293 SDHCPISIDYD 303 SDH P+ +D Sbjct: 257 SDHAPVWAKFD 267 >gi|113867383|ref|YP_725872.1| exonuclease III [Ralstonia eutropha H16] gi|113526159|emb|CAJ92504.1| Exonuclease III [Ralstonia eutropha H16] Length = 276 Score = 98.9 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 85/317 (26%), Gaps = 69/317 (21%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFL 71 + + +R+ SWN+N+L R L + + D + L Sbjct: 1 MSAAALPASGPLRIASWNVNSL------------KVRLPQVLQWLAEQDQTGAPIDALCL 48 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 QE+ P + + + + + +A+ + + Sbjct: 49 QELK--------LPDDKYP--LAELENAGFHSIYTGQKTYNGVAIL-------ARDASMP 91 Query: 132 GAKDSFSRAGN-RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G D A + ++ + ++ + + DS + Y + Sbjct: 92 GPADVVRNIPGFEDAQQRVIAATYGDLRLVCAYFPNGQAPDSDKFVYK------LKWLDA 145 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLI 235 + W+ ++ + + GDFN +D + + Sbjct: 146 MTAWLREEMKRYPKLALLGDFNIAPEDRDVHDPKKWEGQNLVSPQERAAFAALVELGLAD 205 Query: 236 RFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 F ++ + A ++ ID+ ++ D + Sbjct: 206 AF-RQFEQPEKAFSWWDYRMMAFRRNAGLRIDHILLSPALTSGCSACVI-------DRVP 257 Query: 287 SRGKRLSDHCPISIDYD 303 ++ SDH P+ Sbjct: 258 RTWEQPSDHTPVVATLS 274 >gi|118470089|ref|YP_886033.1| exodeoxyribonuclease III [Mycobacterium smegmatis str. MC2 155] gi|118171376|gb|ABK72272.1| exodeoxyribonuclease III [Mycobacterium smegmatis str. MC2 155] Length = 273 Score = 98.9 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 86/309 (27%), Gaps = 62/309 (20%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + Q + + + N+N +R+T + +L + K AD++ +QE Sbjct: 2 ASPQTLTVTTINVNGARA--------ACKERSTENLGMLA-WLKQTRADVICMQETRCE- 51 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 F L + +AV + + D+ Sbjct: 52 --DDQLAATFETAFADGWHLASAPSE---RKGRNGVAVLSRTPFDDIRIGCGAEEFDTHG 106 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R +E++ I V+ +++ + + + +S++ L+ Sbjct: 107 RW---------IEVDTAGITVVSVYVPTGEAETERQLEKERFMAGVSKRMAQLQA----- 152 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKT---------------IDPNDSLIRFPKEKDS 243 ++ GD+N + + + + + Sbjct: 153 --GDREALVCGDWNIGHTENDIKNWKGNVKKSGFLPEERAWVSGLLASGWVDAVRQLHGD 210 Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + IDY ++ L+ + ++ R SD Sbjct: 211 VPGPYSWWSWRGKAFDNDAGWRIDYHLVTPGLAGRLVAGG-------TERPEAYALRWSD 263 Query: 295 HCPISIDYD 303 H P+++++ Sbjct: 264 HAPVTVEFS 272 >gi|330998076|ref|ZP_08321904.1| endonuclease/exonuclease/phosphatase family protein [Paraprevotella xylaniphila YIT 11841] gi|329569165|gb|EGG50956.1| endonuclease/exonuclease/phosphatase family protein [Paraprevotella xylaniphila YIT 11841] Length = 336 Score = 98.9 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 94/320 (29%), Gaps = 48/320 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNS-----------VKRTTSDYTLLRQYAKNLD----A 66 Q R++ +N+ L + SL ++ R L + + Sbjct: 24 QPFRVMFYNVENLFDCRHDSLKEDREFLPGGEKKWTPSRYWRKLDALSKVVAAVGEERLP 83 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D+V L E+ + + + F + + I A+ + + R+L+ Sbjct: 84 DLVGLCEVENDSVL---FDLTRRSSLRALGYRYVATHSPDVRGIDVALLYQPGSFRLLES 140 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 + + D+ R R + + + +G + VL HL S + + + Sbjct: 141 REITVPSVDAGFR-PTRNVLYVKGRVLSGDTLHVLVCHLPSRLGATRVSRRHRMLAART- 198 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + D I V+ GDFN + F + E Sbjct: 199 --VSAVADSIRTVVG-DARIVVMGDFNAGSEDEVFLEAFIPYFHEPELAFSRQSEVKG-- 253 Query: 246 NANKNLRNKIPIDYFVMDQ----NAYKFLIQESFS-----------------EILYNEDD 284 + + ID+ ++ N+ F + + Sbjct: 254 -SYRYRGIWETIDHILVSPVLMDNSRPFHTSDGCRAIVAFPFMCEREKTYGGVRPFRTYQ 312 Query: 285 IKSRGKRLSDHCPISIDYDF 304 SDH P+++D+++ Sbjct: 313 GPLYKGGYSDHFPVTLDFEW 332 >gi|134096852|ref|YP_001102513.1| putative large secreted protein [Saccharopolyspora erythraea NRRL 2338] gi|291005103|ref|ZP_06563076.1| putative large secreted protein [Saccharopolyspora erythraea NRRL 2338] gi|133909475|emb|CAL99587.1| putative large secreted protein [Saccharopolyspora erythraea NRRL 2338] Length = 602 Score = 98.9 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 35/329 (10%), Positives = 79/329 (24%), Gaps = 69/329 (20%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSY 77 ++ + ++N+ L+ + + + L Q D+V L+E+ Sbjct: 295 AEDELAVATYNVENLAADDD-----------QAKFDRLAQGIAGNLASPDVVALEEVQDN 343 Query: 78 NAVAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + + + +I A Sbjct: 344 TGAEDDGVVAADQTLRRFTDAIAAAGGPRYEWRQIDPQNGADGGEPGGNIRVAFLFDPAR 403 Query: 121 VRVLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 V + P + + +R+ + G++++V Sbjct: 404 VSFNDRPGGDATTPVRPVADGGGAALSVSPGRIDPANAAWENSRKPLVGEFTFRGQRVFV 463 Query: 160 LDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNR 213 + H S L + P S QA+ ++ + Q + V+AGD N Sbjct: 464 VANHFNSKGGDQPLHGRFQPPVRGSEEQREAQAKAVRAFADQLRAVDDQARIVVAGDLND 523 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273 + + + N +D+ + A Sbjct: 524 FGFSPVVRTLTA----DGALVDAAEGLPPAERYSYVYEGNSQALDHILTSPAAG------ 573 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + SDH P + Sbjct: 574 --TADYDVVHVNAEFADQASDHDPQIVRL 600 >gi|304320634|ref|YP_003854277.1| extracellular nuclease [Parvularcula bermudensis HTCC2503] gi|303299536|gb|ADM09135.1| extracellular nuclease [Parvularcula bermudensis HTCC2503] Length = 1471 Score = 98.9 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 90/356 (25%), Gaps = 74/356 (20%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWK-----------NSVKRTTSDYTLLRQYAKNLD 65 V + + ++N+ + ++ L Q Sbjct: 745 APDVGGDLTVATFNVLNFFTTLDQNGNTSGPSNLEPRGADNQAEFDRQLDKLVQAIGQSG 804 Query: 66 ADIVFLQEMGSY----------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 ADI+ L E+ + +A+ FP T+ S D ++ Sbjct: 805 ADILSLVELENEFADTNGDGQFAIGTLVDALNTAFPTETYAYV-----DPGQSFVDVSDA 859 Query: 110 IHTAIAVRKKNV---------RVLQQSYPLLGAKDSFSRAG----NRRAVELLVE--ING 154 I + V + P LG NR A+ E G Sbjct: 860 ISVGFIYKTDKVQLAEGTTVEILSDADLPGLGLSFGQPVFDGVSTNRAALAATFEEIDGG 919 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPS-----CSLLSQQAQWLKDWITQKKES--LVPFVI 207 ++ ++ H KS S + A L W+ S +I Sbjct: 920 GQVTLVANHFKSKGGSGSGGDADQGDGAGAFNQTRLNAAIALDAWLATDPTSSGDADVMI 979 Query: 208 AGDFNRKINYLGN---NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 GD N + + + + + + + +DY + Sbjct: 980 LGDLNAYAMEDPIAYLKNAGFTDLVDSLADTDYTYGFPVDLGIVPQAQGYGTLDYAFANA 1039 Query: 265 NAYKFLIQESFSEILYNEDDIKSRG-----------------KRLSDHCPISIDYD 303 + ++ + I +E + R SDH P+ I + Sbjct: 1040 SLLSQVVDAAVWHINADEPPVIDYDLDFKPTEQEAYFDPSTPFRSSDHDPVLIGLN 1095 >gi|86357443|ref|YP_469335.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42] gi|86281545|gb|ABC90608.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42] Length = 263 Score = 98.9 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 96/306 (31%), Gaps = 70/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + L Q+ K+ D DIV LQE+ + + + Sbjct: 1 MKIATWNING----------------VKARIDNLTQWLKDSDPDIVCLQEIKT---IDEG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + +A+ K D +R Sbjct: 42 FPRLE-------IEALGYHVETHGQKGFNGVAILSKTSPFEVNRGLPGDPLDEQARF--- 91 Query: 144 RAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +E + + +I V I+L + +D+ + Y + + L+ + ++ Sbjct: 92 --LEAVFTLPDTRILRVCCIYLPNGNPVDTEKYPYKLA------WMERLRSFAAERLAYE 143 Query: 203 VPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNA 247 V+AGD+N D ++ ++ N L + Sbjct: 144 EMLVLAGDYNVIPEPHDCFDPRAWESDALFLPQTRRAFRRLE-NLGLTDAVRATTDATRL 202 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ A + + + + ++ SDH P+ Sbjct: 203 YSFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIEKHV-------RAWEKPSDHVPV 255 Query: 299 SIDYDF 304 +DF Sbjct: 256 IAYFDF 261 >gi|325203504|gb|ADY98957.1| exodeoxyribonuclease III [Neisseria meningitidis M01-240355] Length = 256 Score = 98.9 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 87/305 (28%), Gaps = 73/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + DI+ LQE Sbjct: 1 MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ +N + R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVHIVL-----PALPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V++++ + LDS + Y Q L +++ + Sbjct: 90 RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRYG 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D ++K + + Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWFKNLLDLGLTDSLRQVHPEGAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ L D +R SDH P++ Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDV-------RVDLETRALERPSDHAPVT 251 Query: 300 IDYDF 304 ++D+ Sbjct: 252 AEFDW 256 >gi|134295849|ref|YP_001119584.1| endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis G4] gi|134139006|gb|ABO54749.1| Endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis G4] Length = 284 Score = 98.9 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 41/307 (13%), Positives = 86/307 (28%), Gaps = 50/307 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 +RL+ WNI + +GV + RT + L + D++ LQE+ Sbjct: 1 MRLIDWNIQWGRDADGVVD----LPRTVAAARRLGDF------DVLCLQEVTRGFGALPG 50 Query: 75 -GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + A++ + A+ + L Sbjct: 51 GPGPDQFAELAALLPGYTIVDAIGADLPALEPGAPRRQFGNAIATRLPVGRVLRQLLPWP 110 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 D+ + + R A+E+ + + V+ HL+ + + ++A D Sbjct: 111 ADADAPSMPRVALEVELLAPSGPVRVVTTHLEFYSARQ--RLAQVDALRARHREACAHAD 168 Query: 194 WITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + + PF ++ GDFN + D + + R Sbjct: 169 HPAPAENATGPFSATAQPRDAIVCGDFNSAFDSDAYRRMLEPIADAPSFVDAWVARHPGR 228 Query: 245 CNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + D+ + + + + R SDH Sbjct: 229 TPPPTAGVYDTVQWSDGPLACDFVFVTETLLPRVTRCEI-----------DGDVRASDHQ 277 Query: 297 PISIDYD 303 P+ ++ D Sbjct: 278 PVVLELD 284 >gi|257059551|ref|YP_003137439.1| endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 8802] gi|256589717|gb|ACV00604.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 8802] Length = 1148 Score = 98.9 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 43/322 (13%), Positives = 86/322 (26%), Gaps = 38/322 (11%) Query: 15 PCTAS-VAQKVRLVSWNINTLSEQEGVSLWKNSVKRT----TSDYTLLRQYAKNLDADIV 69 P T V +++ ++N+ + + L +DADI Sbjct: 699 PTTPPDVGGSLKVANFNVLNYFTTIDDAFNDARGADSISEFQRQQDKLVTALLEIDADIF 758 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNV-RVLQQS 127 L E+ + +A N + + D I + + V V + Sbjct: 759 GLVELENNGDIAISNLVNVLNSETAPGTYDYIATGTIGTDAIKVGLIYKTSAVNPVGDYA 818 Query: 128 YPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCS--- 182 +F NR + + G+K+ V H KS Sbjct: 819 ILDSSVDPTFQDDLNRPVLAQTFQQIDTGEKVTVAVNHFKSKGTSGLTNTNDPNYDQGDG 878 Query: 183 ------LLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + A L +W+ + ++I GD N I Sbjct: 879 QGFWNATRTDAANALVNWLATDPTNSGDSDYLIIGDLNSYAMEDPI-----TAIKNAGYT 933 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----- 289 + + + +D+ + + + + + I +E ++ Sbjct: 934 NLIEQFSGADAYSYVFDGQFGYLDHALSNSSLTSQVTGVAEWHINADEPNVFDYNEEFNP 993 Query: 290 --------KRLSDHCPISIDYD 303 R SDH P+ I + Sbjct: 994 PSLYSVDPYRTSDHDPVIIGLN 1015 >gi|330503248|ref|YP_004380117.1| exonuclease III [Pseudomonas mendocina NK-01] gi|328917534|gb|AEB58365.1| exonuclease III [Pseudomonas mendocina NK-01] Length = 270 Score = 98.9 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 83/312 (26%), Gaps = 74/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L+ + D++ LQE + Sbjct: 1 MKIVSFNINGL----------------RARPHQLQALIEKHQPDVIGLQE---TKVADEQ 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + R + + H +A+ + + G + R Sbjct: 42 FPE-------AEIRQLGYHVHYHGQKGHYGVALLSRQEPLSLHK----GFPGDGEDSQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +G I V++ F + + L+ + ++ + Sbjct: 91 FIYGTFADASGNPITVMN-----GYFPQGESRDHPVKFPAKQRFYADLQQLLVERFDPQQ 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 V+ GD N ++L ++ T+ + F Sbjct: 146 ALVVMGDINISPEDCDIGIGEPNRLRWLKTGKCSFLPEEREWLATLKSWGLVDSFRHLNP 205 Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + Q D + Sbjct: 206 EVNDRFSWFDYRSRGFEDEPKRGLRIDVILASQQLQARFKDAGI-------DYDLRGMDK 258 Query: 292 LSDHCPISIDYD 303 SDH PI ++ + Sbjct: 259 PSDHAPIWLELN 270 >gi|218548682|ref|YP_002382473.1| exonuclease III [Escherichia fergusonii ATCC 35469] gi|218356223|emb|CAQ88840.1| exonuclease III [Escherichia fergusonii ATCC 35469] gi|324113497|gb|EGC07472.1| exodeoxyribonuclease III [Escherichia fergusonii B253] Length = 268 Score = 98.9 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 82/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDGEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + + F Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + ++ D ++ S Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|33593125|ref|NP_880769.1| putative exodeoxyribonuclease III [Bordetella pertussis Tohama I] gi|33563500|emb|CAE42388.1| putative exodeoxyribonuclease III [Bordetella pertussis Tohama I] gi|332382537|gb|AEE67384.1| putative exodeoxyribonuclease III [Bordetella pertussis CS] Length = 260 Score = 98.9 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 31/305 (10%), Positives = 82/305 (26%), Gaps = 70/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N+L+ + + D + +QE+ + Sbjct: 1 MKLATWNVNSLN----------------VRLPQVLDWLAANPVDALCIQELKLTDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + + L+ + R Sbjct: 41 ------KFPLDAFTEAGYHAAWAGQKTYNGVAIISREP-----GFALVRNNPRYEDPQQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + + V+ + + +DS + Y + L+DW+ ++ + Sbjct: 90 -ILAVTLPSPAGDVRVICAYCPNGQSVDSDKYVYKLA------WFDGLRDWLEEEMRTYP 142 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 I GD+N ++ + L + + + Sbjct: 143 RLAILGDYNVAPADADVHNPEKWEGQVLVSEPERAAFRALLDLG-LTDSFRLFEQPEKSF 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ + D ++ SDH P+ Sbjct: 202 SWWDYRQFAFRRNAGLRIDHVLLSDALKPHCVACVI-------DKAPRANEQPSDHAPVI 254 Query: 300 IDYDF 304 F Sbjct: 255 ATLAF 259 >gi|189466708|ref|ZP_03015493.1| hypothetical protein BACINT_03083 [Bacteroides intestinalis DSM 17393] gi|189434972|gb|EDV03957.1| hypothetical protein BACINT_03083 [Bacteroides intestinalis DSM 17393] Length = 353 Score = 98.9 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 39/328 (11%), Positives = 86/328 (26%), Gaps = 55/328 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSV-----------KRTTSDYTLLRQYAKNLD----AD 67 R+VS+N+ L + +L + + + + Sbjct: 29 SFRVVSYNVENLFDCRHDTLKNDYEFLPDAVRHWNYTKYKKKLDNIARTITAAGGWTPPA 88 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQ 126 +V L E+ + + + + ++ + N + I A+ R + + Q Sbjct: 89 LVALCEVENDSVLRDLTQRSVLREAGYRYVMTNSPDQ---RGIDVALLYQRDRFKLISYQ 145 Query: 127 SYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 P+ R + + + +N + V +HL S Y + Sbjct: 146 GIPIPHISGKKKLRPTRDILHVCGMLLNHDTLDVFVVHLPSRSGGAKESEPYRLHAAR-- 203 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT--------IDPNDSLIRF 237 Q + D I + +I GDFN + + + P Sbjct: 204 -QLKAAADSIYLHRYHPQ-ILIMGDFNDYPDNASVSKIVSAKAPLQDKSSLQPQRFYHLL 261 Query: 238 PK--EKDSRCNANKNLRNKIPIDYFVMDQNAYK--------FLIQESFS----------- 276 + + K +D+ ++ + + F Sbjct: 262 ARKAATQKDFGSYKYQGEWGLLDHIIVSGTLLQPDADFCTSESKADIFRPSFLLTDDKKY 321 Query: 277 --EILYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P+ D+ Sbjct: 322 GGVQPFRTYYGMKYQNGYSDHLPVWADF 349 >gi|150009697|ref|YP_001304440.1| hypothetical protein BDI_3112 [Parabacteroides distasonis ATCC 8503] gi|255013008|ref|ZP_05285134.1| hypothetical protein B2_03828 [Bacteroides sp. 2_1_7] gi|298374104|ref|ZP_06984062.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] gi|149938121|gb|ABR44818.1| conserved hypothetical protein with endonuclease/exonuclease/phosphatase family domain [Parabacteroides distasonis ATCC 8503] gi|298268472|gb|EFI10127.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] Length = 280 Score = 98.9 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 92/316 (29%), Gaps = 49/316 (15%) Query: 2 IRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 +R ++ + C Q+ + + S+N+ +E + W + Sbjct: 1 MRNLIIVFISLFTFCIGISGQQKCKLNVGSFNLRYDNEGDKDDSWVHRKDMA-------V 53 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 D D+ +QE + V ++ +T+ + H A+ +K Sbjct: 54 SLVHFHDFDVFGIQEGLIHQ-VKELVKDDTYTYVGVGRDDGKEAGE------HAAVLFKK 106 Query: 119 KNVRVLQQSYPLLG-----AKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLD 171 ++L L + R ++ ++GK+ + +H F Sbjct: 107 DRFKLLDSGNYWLSETQDKPSFGWDAQCRRVCSWAKLKDKVSGKEFYFFSVH-----FDH 161 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--TID 229 + S ++ + + P + GDFN + +D Sbjct: 162 IGKVARHESALIMLANIKKIA--------GDSPAICVGDFNGTPDSEPIQILKSDGLLLD 213 Query: 230 PNDSLIRFPKEKDSRCNANK-NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + P N N K IDY + + Y + Sbjct: 214 SREISKTPPYGTVGTTNQFNLNAPMKNRIDYIFVTK---------GIQVNKYGTLNECQY 264 Query: 289 GKRLSDHCPISIDYDF 304 G SDH PI I+ +F Sbjct: 265 GHFSSDHFPIMIEAEF 280 >gi|119471476|ref|ZP_01613917.1| hypothetical protein ATW7_16665 [Alteromonadales bacterium TW-7] gi|119445575|gb|EAW26860.1| hypothetical protein ATW7_16665 [Alteromonadales bacterium TW-7] Length = 910 Score = 98.9 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 44/317 (13%), Positives = 88/317 (27%), Gaps = 41/317 (12%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTT------SDYTLLRQYAKNLDADIVFLQEMGS 76 +R+ S+N+ +G + + L + AD+V L E+ + Sbjct: 461 DLRVASFNVLNYFNGDGQGAGFPTSRGADSLEELVRQEAKLVSAISAMQADVVGLMEIEN 520 Query: 77 Y-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 +A+A + + ++ + D T + + N S + Sbjct: 521 DGFGEFSAIASLVNALNDADSANEYAFVDFNVNQVGTDAITTALIYRANKVEEVGSAAIT 580 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--FCFLDSLENTYSPSCSLLSQQAQ 189 A A + + V HLKS C S N + + Sbjct: 581 TAAPFDFSNRTPIAQSFKSLESQEVFTVAVAHLKSKGGCGSASGANEDQNDGQACWNEIR 640 Query: 190 -----WLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 DW+ K ++ GD N D K + + + + Sbjct: 641 TEGASAFADWLDSKPTGVDDEDIILVGDMNA----YAMEDPIRKFDEKGYKNVVAELDGN 696 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------------- 289 + + +D+ V ++ ++ I +E + Sbjct: 697 TLAYSYSFSGRAGSLDHAVATESLLSKVVAAKDWHINADEPIVLDYNVEFKSEGHQSTLY 756 Query: 290 ----KRLSDHCPISIDY 302 R SDH P+ +D Sbjct: 757 SESAYRASDHDPVIVDI 773 >gi|241831529|ref|XP_002414867.1| glucose-repressible alcohol dehydrogenase, putative [Ixodes scapularis] gi|215509079|gb|EEC18532.1| glucose-repressible alcohol dehydrogenase, putative [Ixodes scapularis] Length = 368 Score = 98.9 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 40/298 (13%), Positives = 95/298 (31%), Gaps = 22/298 (7%) Query: 17 TASVAQKVRLVSWNI--NTLSEQ-EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + VR++ WN+ L+EQ +G + ++ + + + + + D++ LQE Sbjct: 58 AQPGPETVRVLQWNLLSQALAEQADGFACCPDAALDWSKRRWRILEEVLSYEPDLICLQE 117 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + Y + + + + N+ A+ + Sbjct: 118 VDHYKFLRASLGSVGFGGTFFPKPDSPCCYV-RGNNGPDGCAIFYDKAKFELVRCEKRVL 176 Query: 134 KDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + ++ + + +++ ++ ++ HLK+ SL ++Q + L Sbjct: 177 EVFTCQSNQVTLLCVFRRKLDDAELCLVTTHLKARQGG--------LLSSLRNEQGKDLL 228 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPK-EKDSRCNANKN 250 D++ + P +IAGDFN + + + S P + + Sbjct: 229 DFVQNHRGR-RPTIIAGDFNAEPTEPVYKTLLAQRDLSLESSYALQPGSGRREQEPPYTT 287 Query: 251 LRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + IDY + + + F SDH + D Sbjct: 288 WKIREDGEVRHTIDYIFFSKADFSLEARLDFPTEDQIGPGRVPSLAYASDHFSLVADL 345 >gi|319795420|ref|YP_004157060.1| endonuclease/exonuclease/phosphatase [Variovorax paradoxus EPS] gi|315597883|gb|ADU38949.1| Endonuclease/exonuclease/phosphatase [Variovorax paradoxus EPS] Length = 274 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 86/285 (30%), Gaps = 49/285 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +R+ ++NI+ + + L + LDADIV LQE+ + A A Sbjct: 31 LRVATYNIH--------KGVQGIGPARRLEIHNLGHAIEQLDADIVCLQEVRKMNRQAAA 82 Query: 82 KVFPK---NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + A+ + + + S Sbjct: 83 RFARWPELPQADFLAPEGYTAVYETNAVTRHGEHGNALLTRWPVIRTGHQDI-----SDH 137 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R R + +++E+ G+ + + +HL +Q L+++I ++ Sbjct: 138 RFEQRGLLHVVIEVEGQPVHAIVVHLGLIKGS-------------RVRQIARLREFIDRE 184 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + V+AGDFN + L + R + +D Sbjct: 185 VPAHEAVVVAGDFNDWGAR-------MRYAMNAMGLRDASDLRGPRTLTYPSRLPVAQLD 237 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + L S + R+SDH P+ D+ Sbjct: 238 FVY-----GRKLEPLSCTVPRGPI------WARMSDHLPLVADFS 271 >gi|118475423|ref|YP_891999.1| endonuclease/exonuclease/phosphatase, putative [Campylobacter fetus subsp. fetus 82-40] gi|118414649|gb|ABK83069.1| endonuclease/exonuclease/phosphatase, putative [Campylobacter fetus subsp. fetus 82-40] Length = 431 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 37/308 (12%), Positives = 87/308 (28%), Gaps = 56/308 (18%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQE-------GVSLWKNSVKRTTSDYTLLR 58 VL L+F + ++ ++++ ++N+ L + + + + Sbjct: 3 VLILLFIAIFSISA---ELKIATYNVENLFDDNIDGSEYKDFKDGTWNTAKYIQKLNNIS 59 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + K LDAD + + E+ + + + ++ K+ + + + V Sbjct: 60 RVIKALDADFISVLEIENSSVLKQLAMKSGYKFYEFATNKNAP----------VGLGVMS 109 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K + + + R + + G+ I H + Sbjct: 110 KYPILSSRKIVIP-------NLKTRPILVSEISFGGETIKFFSTHFPA----------AK 152 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 S A + + +K S +I GD N Y +D + Sbjct: 153 NSLKDRKTAANTMIKAVENEKNS----IILGDLNSNYGYGFLLNDLNGEFKNLWEFV--- 205 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYK---FLIQESFSEILYNEDDIKSRGKRLSDH 295 + + ID+ ++ + + SF + + SDH Sbjct: 206 -----GNRDRSSYKKGGAIDHIMLQNSFFNGNIRYKNSSFGVFKPSFLSSG----KFSDH 256 Query: 296 CPISIDYD 303 I Sbjct: 257 YAIYAVLT 264 >gi|312130846|ref|YP_003998186.1| endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] gi|311907392|gb|ADQ17833.1| Endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] Length = 600 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 93/323 (28%), Gaps = 48/323 (14%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDADIVFLQ 72 + + ++N+ +G + + AD+V L Sbjct: 281 PKGTNLTVAAFNVLNYFNGDGKGGGFPTERGASSLEELKRQQDKTVNVILASGADVVTLM 340 Query: 73 EMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 E+ + +A+ + + + + + + I +A+ K V+ + Sbjct: 341 EIENDGFDEHSAIQTLIKALNEKSGGTRQFVACENPDRGWDAIVSALLYDSKKVQPVGAM 400 Query: 128 YPLLGAKDS-FSRAGNRRAVELLVEI--NGKKIWVLDIHLKS------FCFLDSLENTYS 178 + S + R+ V + V+ +H KS + L + Sbjct: 401 VTMPDGYGSASFDSTRRKPVIQTFSTLKENEVFTVVGVHFKSKGVQSPGEGNEDLLDGQG 460 Query: 179 PSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + L QQA+ LK+W+ + +++ GDFN +D Sbjct: 461 RNNKLRVQQAEDLKNWLATRPTGTDDPDYILMGDFNSYAMEDP-----LIYLDEQGYHPL 515 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------- 289 FP + + +D+ + + + I +E + Sbjct: 516 FP----ATSYSYVYDGFWGSLDHALATPTMKSQVKKAVKWHINSDEAPVLDYNMEYKSAE 571 Query: 290 ----------KRLSDHCPISIDY 302 R SDH PI I Sbjct: 572 QIKSYYDASPFRSSDHDPIIIRL 594 >gi|161510986|ref|YP_088240.2| exonuclease III [Mannheimia succiniciproducens MBEL55E] Length = 267 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 34/311 (10%), Positives = 80/311 (25%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++S+NIN L + L + + DI+ LQE + Sbjct: 1 MKIISFNINGL----------------RARPHQLDKIVEQYQPDIIGLQEIKVADEMFPH 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + +++ H +A+ K +D+ R Sbjct: 45 ELVDHLGYHVYHH------------GQKGHYGVALLCKQAPKAVHKGFSTDTEDAQKR-- 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + E + V++ F + + L +++ + Sbjct: 91 ---LIMADFETAFGALTVVN-----GYFPQGESRDHETKFPAKEKFYADLLNYVKNEHNP 142 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 +I GD N L ++++ + F K Sbjct: 143 ESNIIIMGDMNISPTDLDIGIGEDSRKRWLRTGKCSFLPEEREWYQRLYECGLEDTFRKL 202 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID+ + + + + ++ Sbjct: 203 NPWTNDKFSWFDYRSKGFAENRGLRIDHILANSKLAERCVDTGI-------ALDIRAMEK 255 Query: 292 LSDHCPISIDY 302 SDH PI + Sbjct: 256 PSDHAPIWATF 266 >gi|188994745|ref|YP_001928997.1| hypothetical protein PGN_0881 [Porphyromonas gingivalis ATCC 33277] gi|188594425|dbj|BAG33400.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 375 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 93/309 (30%), Gaps = 61/309 (19%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-MG 75 ++ +++++++N+ + S N + +Y K ADIV LQE + Sbjct: 106 SSIPQSRIKVMTYNVKGFDFRAHNSEDPNP----------ILKYIKGSGADIVCLQEAVL 155 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 S + ++ T+ + R + S + + + + K + P A + Sbjct: 156 SRKSNSRYVGLRTFKKYLPEYRYMELSHAREDRKG-SGLMLLSKYPILDVHRIPYESAFN 214 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL------------ 183 + V+I G+K+ V++ HL+SF + Y Sbjct: 215 --------GSTAYTVDIQGRKVLVVNNHLESFRLTMADGTEYLKMVREGEAAALSRMMTA 266 Query: 184 --------LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 + QA + +I ++ GDFN + + Sbjct: 267 KMGPAYALRAVQADSVSHYIRC--SESEHVIVCGDFNDTPISYARHKI------ASGLKD 318 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + K+ ID+ + + + + SDH Sbjct: 319 AYSDTGRGPGFTFNQGAFKVRIDHILYSSGFLAY-------------NCTVDKSVHASDH 365 Query: 296 CPISIDYDF 304 P+ F Sbjct: 366 FPVWCYLVF 374 >gi|288941776|ref|YP_003444016.1| exodeoxyribonuclease III [Allochromatium vinosum DSM 180] gi|288897148|gb|ADC62984.1| exodeoxyribonuclease III [Allochromatium vinosum DSM 180] Length = 278 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 86/312 (27%), Gaps = 74/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN + + LD DI+ LQE + Sbjct: 2 LKIVSFNING----------------VRARPHQVEALKAGLDPDILALQE---SKVADEQ 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + R + + R H +A+ K G + + A R Sbjct: 43 FPLD-------WARGLGYDVRIHGQKGHYGVALLSKQSPHSVVK----GLPNDDAEAQRR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +G ++ V++ F + Q L D++ Sbjct: 92 LILGQYRLADGDEVTVIN-----GYFPQGEGRDHPLKFPAKQQFYAGLLDYLRTAFRPDQ 146 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 V+ GD N +L ++++ + + + Sbjct: 147 NIVLLGDMNVAPLDLDIGIGADNAKRWLRTGKCAFLPEEREWFQALLDWGLIDAYRTRHP 206 Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID+ ++ + LI D + Sbjct: 207 ETADRFSWFDYRSRGFEREPKHGLRIDHILISAPLRERLIDVGI-------DYAIRAMDK 259 Query: 292 LSDHCPISIDYD 303 SDHCP+ I D Sbjct: 260 PSDHCPVWITLD 271 >gi|325528671|gb|EGD05753.1| putative extracellular endonuclease/exonuclease/phosphatase [Burkholderia sp. TJI49] Length = 402 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 91/315 (28%), Gaps = 47/315 (14%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ N + + + R +Y + K LDAD++ L E+ Sbjct: 92 LRVASFNVLNYFNGNGLGGGFDDPNNRGAKNYQEFVRQDAKIVSALKALDADVIGLMEIQ 151 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + S + + R + I A+ + V P+ A Sbjct: 152 NNGYGELSAVRQLAAKLGDSWRVVDPGTSRLGGDAIAVAMIYDSRKVE------PVGRAA 205 Query: 135 DSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186 NR+ + + + + HLKS D+ + ++ Sbjct: 206 TLAIDDKNRQPLAQSFRRIGGKQALTIAVNHLKSKNCPDATNDDLDQGDGQGCWNPTRTR 265 Query: 187 QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A L DW+ + ++ GDFN + ++ + + Sbjct: 266 AAAKLADWLAGTPTGVAGQGVLLIGDFNSYTYEDPI-----RLLESRGYRNLVSRWIGDK 320 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR---------------- 288 + +D+ + + I +E Sbjct: 321 AYSYVYNGEAGYLDHALASLPLASHVKAVHEWHINADEPVALQYTLAYKTAAQQQTYYAP 380 Query: 289 -GKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 381 DAYRSSDHDPVLIDI 395 >gi|212710738|ref|ZP_03318866.1| hypothetical protein PROVALCAL_01806 [Providencia alcalifaciens DSM 30120] gi|212686435|gb|EEB45963.1| hypothetical protein PROVALCAL_01806 [Providencia alcalifaciens DSM 30120] Length = 270 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 86/310 (27%), Gaps = 73/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +S+NIN L + L + +++ LQE + Sbjct: 1 MKFISFNINGL----------------RARPHQLEAIIEKHQPEVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP Y + + H +A+ KN + + + R Sbjct: 42 FP-------YEEVSKLGYHVYYHGQKAHYGVALLLKNEPIAVRK-----GFPTDDEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + ++ N + V++ F + + + L+D++T + + Sbjct: 90 RIIMADIQTNEGILTVVN-----GYFPQGESRDHPTKFPAKEKFYRDLQDYVTSTQTADS 144 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 +I GD N L ++ + + + + ++ Sbjct: 145 QLLIMGDMNISPTDLDIGIGDVNRKRWLKTGKCSFLPEEREWLERLLGWGLVDTYREQHP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + D ++ S Sbjct: 205 DTTDRYSWFDYRSKGFDDNRGLRIDLLLASKKLASRCRATGI-------DYDIRGMEKPS 257 Query: 294 DHCPISIDYD 303 DH P+ ++D Sbjct: 258 DHAPVWAEFD 267 >gi|283833419|ref|ZP_06353160.1| exodeoxyribonuclease III [Citrobacter youngae ATCC 29220] gi|291071073|gb|EFE09182.1| exodeoxyribonuclease III [Citrobacter youngae ATCC 29220] Length = 268 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 81/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLAAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPNDGEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + I V++ F + + Q L++++ + + Sbjct: 90 RIIMAEIPSPLGSITVIN-----GYFPQGESRDHETKFPAKAAFYQNLQNYLETELKRDN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + + + Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLLGWGLVDTYRHAWP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + + ID + + + D ++ S Sbjct: 205 EKNDQFSWFDYRSKGFDDNRGLRIDLLLASNPLAERCEETGI-------DYEIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWAKF 266 >gi|300917685|ref|ZP_07134334.1| exodeoxyribonuclease III [Escherichia coli MS 115-1] gi|300415086|gb|EFJ98396.1| exodeoxyribonuclease III [Escherichia coli MS 115-1] Length = 272 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 82/312 (26%), Gaps = 73/312 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++ VS+NIN L + L + D++ LQE Sbjct: 2 AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +FP + ++ H +A+ K + + Sbjct: 43 DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEE 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + + + V++ F + +Q Q L++++ + + Sbjct: 91 AQRRIIMAEIPSLLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELK 145 Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239 P +I GD N L ++ + + F Sbjct: 146 RDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRH 205 Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + Q + ++ D + Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258 Query: 291 RLSDHCPISIDY 302 + SDH P+ + Sbjct: 259 KPSDHAPVWATF 270 >gi|256825383|ref|YP_003149343.1| extracellular nuclease [Kytococcus sedentarius DSM 20547] gi|256688776|gb|ACV06578.1| predicted extracellular nuclease [Kytococcus sedentarius DSM 20547] Length = 802 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 37/329 (11%), Positives = 79/329 (24%), Gaps = 60/329 (18%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 V + ++N+ LS + + + + DIV L+E+ N Sbjct: 480 DAVDVATFNVENLSPTDDSGKFAGLADQLVENLN---------SPDIVALEEIQDNNGSQ 530 Query: 82 ------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 + + + +I R + Sbjct: 531 NDGTVDSGTTVAKLVDAIEEAGGPRYEAAW-INPEDGADGGQPGGNIRNVFLHRTDVPGL 589 Query: 124 L-----------------------QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 P S + +R+ + G+ ++V+ Sbjct: 590 RFVERAGGDATTATTVQERGRWARLSVSPGRINPMSTAWENSRKPLVAEYSYRGRPLFVI 649 Query: 161 DIHLKSFCFLDSLENTY----SPSCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRK 214 +H S D L + PS QA+ ++ ++ ++AGD N Sbjct: 650 GVHFASKGGDDPLFGRWQQPERPSEVQRLAQAREVRGFVDSLLAKDATANVIVAGDVNDF 709 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ-E 273 + + N +D+ ++ +N + Sbjct: 710 EFSPVTDTLVGS--GATALRDLPRELAPQDRYTYNYQGNSQVLDHILLSRNLTESAHPFG 767 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +LSDH P + Sbjct: 768 GAPYEHDVVHVNADFHDQLSDHDPQVVSI 796 >gi|86141528|ref|ZP_01060074.1| probable secreted protein [Leeuwenhoekiella blandensis MED217] gi|85832087|gb|EAQ50542.1| probable secreted protein [Leeuwenhoekiella blandensis MED217] Length = 269 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 50/317 (15%), Positives = 98/317 (30%), Gaps = 61/317 (19%) Query: 1 MIRKYVLALVFFL-----------VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKR 49 M + + + FL + + +++++S+NI+ + + + Sbjct: 1 MTKGIIFKITLFLSSYPMLSQEGSTATFENSSNQLKVLSYNIHHANP---------PMHK 51 Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 + D + + Q K+ DAD+V LQE+ S I + + K + Sbjct: 52 DSIDLSAIIQVIKDSDADLVALQEIDSDTQ-RSGSGNQAQKIGDALGMQVFFGKSIDFQN 110 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFC 168 +A+ + + + Y L ++ R L+++ + IW HL Sbjct: 111 GAYGVAILSRFPIIASKVYKLPSKPETQG--EPRVLALSLIQLPDAQTIWFASTHL---- 164 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 + Q L + P ++AGDFN N Sbjct: 165 -------DSQKEDTNRILQIAEL---LNITTNLNQPVLVAGDFNAVANSPVI-------- 206 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 SL S C + N ID+ ++ L + Y Sbjct: 207 ---ASLDSVFTRTCSSCPPTIPVENPSKAIDFIAFKPKSFFRLNNHRVIDEHY------- 256 Query: 288 RGKRLSDHCPISIDYDF 304 SDH P+ ++ + Sbjct: 257 ----ASDHLPVFANFQW 269 >gi|124267258|ref|YP_001021262.1| exodeoxyribonuclease III [Methylibium petroleiphilum PM1] gi|124260033|gb|ABM95027.1| Exodeoxyribonuclease III [Methylibium petroleiphilum PM1] Length = 256 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 90/304 (29%), Gaps = 74/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N+L+ + + D + LQE + Sbjct: 1 MRLATWNVNSLA----------------VRLPQVLDWLTANPVDALVLQETKLTDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + + +A+ + ++ + F+ R Sbjct: 41 ------KFPRAEIEAAGYAVQWFGQKTYNGVALLSREP-----AHDVTKNIFGFADEQAR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V+ + + DS + TY + Q L+DW+ + + Sbjct: 90 VIAGTV-----DGVRVIGAYFPNGQAPDSEKFTYKMA------WLQALRDWVRSELAAHP 138 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN +D ++ + + F + + + Sbjct: 139 RLVLMGDFNIAPEDRDVHDPVLWAGQIHCTPQEREHFRELIALGLVDAF-RLFEQPPKSW 197 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ + + D + + +R SDH P+ Sbjct: 198 SWWDYRNLAFRKNQGLRIDHILVSEALRPAVSACMI-------DKLPRKNERPSDHAPVV 250 Query: 300 IDYD 303 ++ Sbjct: 251 VELS 254 >gi|320332627|ref|YP_004169338.1| endonuclease/exonuclease/phosphatase [Deinococcus maricopensis DSM 21211] gi|319753916|gb|ADV65673.1| Endonuclease/exonuclease/phosphatase [Deinococcus maricopensis DSM 21211] Length = 1242 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 46/318 (14%), Positives = 91/318 (28%), Gaps = 44/318 (13%) Query: 19 SVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 +V +++ N+ N + NS + K LDAD+V L E+ + Sbjct: 684 AVGGTLKVAGANVLNYFTTFGSNDRGANSAYEFARQKAKIVAALKGLDADVVTLMEIQND 743 Query: 78 NAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + A + + + + I A+ + V ++ + Sbjct: 744 SDAALNDLTGALNAAYGQNVYAALSTGKVGTDAIRVAMIYKPARVTLV------GAPRID 797 Query: 137 FSRAGNRRAVELLVEI--NGKKIWVLDIHLKS-FCFLDSLENTYSPSCS--LLSQQAQWL 191 + +R V +G V+ H KS +S + C L QQAQ + Sbjct: 798 QNSVYSRPPVAQTFRDLSSGGTFTVIANHFKSKGSCPNSGDTDNGQGCWNTLRVQQAQAV 857 Query: 192 KDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + Q + S +I GD N + +T+ + + + Sbjct: 858 LAFAEQLRASTGDPDVLIMGDLNAYGDEDPI-----RTLVAGGFESLNKRIPAEDRYSYQ 912 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------------- 289 +D+ + + + I +E Sbjct: 913 FSGQFGYLDHALASTALAGQVTGITEWHINSDEPVFLDYNVEFKNNPECKSTTCTTPDLY 972 Query: 290 ----KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 973 APTAFRASDHDPVLVGLN 990 >gi|242090413|ref|XP_002441039.1| hypothetical protein SORBIDRAFT_09g019230 [Sorghum bicolor] gi|241946324|gb|EES19469.1| hypothetical protein SORBIDRAFT_09g019230 [Sorghum bicolor] Length = 393 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 42/322 (13%), Positives = 85/322 (26%), Gaps = 36/322 (11%) Query: 17 TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + + RLVS+NI + ++ + S + K+ DAD++ +QE+ Sbjct: 67 AGAAGYQFRLVSYNILAQVYIKSTFFPHSPSACLKWKSRSKAILTELKSFDADLMCIQEL 126 Query: 75 GSYNAV-AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK--------------- 118 Y+ K + + Y +A V+K Sbjct: 127 DEYDTFYKKNMENSGYSSIYIQRSGDKRDGCGIFYKPKSAELVQKEGIHYNDLVEKYVPS 186 Query: 119 ----------KNVRVLQQSYPLLGAKDSFSRAGNR-----RAVELLVEINGKKIWVLDIH 163 + + + P + + R + +++ +L + Sbjct: 187 DHVNSAQENNSSTEEDKNAKPDNSKRGDPNDPRVRLKRDCVGLLAAFKLSDPCDHILIVA 246 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 + + L + + I+ K +IAGDFN N Sbjct: 247 NTHIYWDPEWIDVKLAQAKYLLSRVSQFEQLISNKYNCKPSVIIAGDFNSTPGDKVYNYL 306 Query: 224 FWKTID-PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ--ESFSEILY 280 + P + N +DY + + Sbjct: 307 VSAGGETPIKLSSLYAANGGEPEYTNYTPGFTGTLDYIFLSDGSSIKPTSLLCLPRGDSE 366 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 + + SDH PI D+ Sbjct: 367 DVKGGLPNFQHPSDHLPIGADF 388 >gi|190891504|ref|YP_001978046.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652] gi|190696783|gb|ACE90868.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652] Length = 263 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 100/306 (32%), Gaps = 70/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + L Q+ K+ D DIV LQE+ + + + Sbjct: 1 MKIATWNING----------------VKARIDNLTQWLKDSDPDIVCLQEIKT---IDEG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + +A+ K+ A D +R Sbjct: 42 FPRLE-------IEALGYHVETHGQKGFNGVAILSKSSPSEVNRGLPGDALDEQARF--- 91 Query: 144 RAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +E + + +I V I+L + +++ + Y + + L+ + ++ Sbjct: 92 --LEAVFTLPDTRILRVCCIYLPNGNPVETEKYPYKLA------WMERLRSFAAERLAYE 143 Query: 203 VPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 V+AGD+N +L + ++ ++ N L + Sbjct: 144 EMLVLAGDYNVIPEPHDCFDPKVWENDALFLPQTREAFRRLE-NLGLTDAVRATTDATRL 202 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ A + + + + ++ SDH P+ Sbjct: 203 YSFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIEKHV-------RAWEKPSDHVPV 255 Query: 299 SIDYDF 304 +DF Sbjct: 256 IAYFDF 261 >gi|300703904|ref|YP_003745506.1| exodeoxyribonuclease III [Ralstonia solanacearum CFBP2957] gi|299071567|emb|CBJ42891.1| EXODEOXYRIBONUCLEASE III [Ralstonia solanacearum CFBP2957] Length = 269 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 92/304 (30%), Gaps = 63/304 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAK 82 +R+ +WN+N+L R L + + D++ LQE+ + Sbjct: 1 MRVATWNVNSL------------KVRLPHVLQWLAEREADATPIDLLCLQELKLPDDRYP 48 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + ++ + + +A+ + + + ++ F+ Sbjct: 49 LAELDA----------AGYASLFTGQKTYNGVAILARKA-AMPEGRDVVKNIPGFADEQQ 97 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R V ++ G + V+ + + LDS + Y + L+DW+ + + Sbjct: 98 R-IVAATYDVAGGPVRVISAYFPNGQALDSDKMVYK------MRWLAALQDWLKAEMVAH 150 Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GDFN + ++ ++ + F + Sbjct: 151 PRLMLLGDFNIAPDDRDVHDPKKWEGMNLVSPEERAAFRALESAGLVDAFRMFDQAD-KL 209 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + ID+ ++ + D + ++ SDH P+ Sbjct: 210 FSWWDYRLFAFRRNAGLRIDHILLSPELAQRCESCHI-------DRVPRGWEQPSDHTPV 262 Query: 299 SIDY 302 Sbjct: 263 VAAL 266 >gi|292490590|ref|YP_003526029.1| exodeoxyribonuclease III Xth [Nitrosococcus halophilus Nc4] gi|291579185|gb|ADE13642.1| exodeoxyribonuclease III Xth [Nitrosococcus halophilus Nc4] Length = 257 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 85/307 (27%), Gaps = 80/307 (26%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80 K+++ +WN+N+L + + + DI+ LQE + Sbjct: 3 KLKIATWNVNSL----------------RVRLPQVMDWLEAHQPDILALQETKLSDGEFP 46 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + F + S + +A+ + Q + Sbjct: 47 QEAFGDMGYRAA------------YSGQKTYNGVAILCR------QEPQDIMTDLPNLED 88 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + + + I +L++++ + + S + Y +KD++ + Sbjct: 89 PQRRILGISL----GDIRLLNLYVPNGSEVGSEKYAYKLD------WLARVKDYLQEALA 138 Query: 201 SLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 ++ GDFN + + +D + + Sbjct: 139 EYPKLIVLGDFNVAPGDGDVHNPEIWHETILCSTPEREALGEILDLG--FQDSFRLFEQE 196 Query: 245 CNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + ID ++ + + D R KR SDH Sbjct: 197 GQSFSWWDYRGGAFRRNWGLRIDLILISKELVPKCTECVI-------DKEPRRLKRPSDH 249 Query: 296 CPISIDY 302 P+ + Sbjct: 250 APVIATF 256 >gi|218462948|ref|ZP_03503039.1| putative phosphatase protein [Rhizobium etli Kim 5] Length = 288 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 47/322 (14%), Positives = 83/322 (25%), Gaps = 79/322 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 + S+NI +G D + + + ADI+ LQE+ Sbjct: 1 MNFASYNIQYGFGLDG-----------RYDLARIARSLER--ADIIALQEVTRGFSRNGF 47 Query: 75 -GSYNAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 +A FP + W E S V + V ++ Sbjct: 48 ADMVAGIAAFFPDHFWVYGPACDLHVEADQGKSAPAPGTRFQFGNMVLSRWPIVSTRTLL 107 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 L ++ R A E ++ + G I V +HL +Q Q Sbjct: 108 LPRSRTLGKINPQRGATEAVITVPGGAIRVYSVHLDHVSPD------------ERIRQLQ 155 Query: 190 WLKDWITQKKESL-----------------VPFVIAGDFNRKINYLGN-------NDDFW 225 +L I + +VI GDFN + + Sbjct: 156 FLNAHINAFVQEGGSLTGAAEFDLPEPPLPEDYVIMGDFNMEPESPEYCALAGAAGGYYG 215 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 + + F + R + ++ +DY + L Sbjct: 216 RVARIGTPVDAFATLEAYRPESYSWMDPEDHGKRMHLDYCFVSCGLVSRLKSARI----- 270 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 SDH P+ ++ Sbjct: 271 ------DTQSVGSDHFPLWVEI 286 >gi|254420344|ref|ZP_05034068.1| endonuclease/exonuclease/phosphatase family [Brevundimonas sp. BAL3] gi|196186521|gb|EDX81497.1| endonuclease/exonuclease/phosphatase family [Brevundimonas sp. BAL3] Length = 245 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 78/279 (27%), Gaps = 42/279 (15%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 RL+++N++ + D + +ADIV LQE+ A Sbjct: 3 RLLTYNVHRCVGTDK-----------RLDVDRIVAVIGEHEADIVCLQELDVGRARTGKV 51 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + H A+ + L ++ L + R Sbjct: 52 DQAEAIAEGLAMTSRFHPAMRV-EAELYGDAILTPHPDKLIRADALPTVRGIPG-LEPRG 109 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 A+ ++I G + VL HL QA L P Sbjct: 110 AIWSEIQIEGVGVNVLTTHLGLVP-------------REQRLQAAALAGD-GWLAGCTGP 155 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 ++AGDFN + + + L+ + I ID+ + Sbjct: 156 TLLAGDFNAT-SITRPYQTLARRLGDCQRLL----NLKPSVKTFPSGFPAIRIDHCFVSP 210 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 I + D + SDH P+ ID++ Sbjct: 211 EIR----------ITGVKADFSPLARVASDHLPLIIDFE 239 >gi|325923708|ref|ZP_08185327.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865] gi|325545794|gb|EGD17029.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865] Length = 251 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 35/280 (12%), Positives = 82/280 (29%), Gaps = 33/280 (11%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 +S+N+ V + + KR T + + D+ QE+ A Sbjct: 1 MSFNVR-------VPVDTDGDKRWEVRRTAMVALIEQAHPDVFGTQELVEEQAQYLAAHL 53 Query: 87 NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146 + F R + + + ++ P + S++ R A Sbjct: 54 PAYRWFGKGRRADGSDEHM-GVFYDSRVLTVVESGDFWLSETPEIPGSSSWNTDLPRMAT 112 Query: 147 ELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 L E + ++ ++ + H + A+ + I + +P Sbjct: 113 WALFERRSDKRRFYLFNTHFAH----------RDQDEAAREHSARVILSRIAT-LPADIP 161 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 V+ GDFN + G + + + + + ID+ + Sbjct: 162 VVVTGDFNSDPDN-GTYRTLTAVLGDARAHATKRQGPEKTFQDFTTHPTR-RIDWILFRG 219 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + ++ + + G SDH P+ ++ + Sbjct: 220 ----------LTPTRFSTLETRPGGILPSDHYPVLAEFAW 249 >gi|170768737|ref|ZP_02903190.1| exodeoxyribonuclease III [Escherichia albertii TW07627] gi|170122285|gb|EDS91216.1| exodeoxyribonuclease III [Escherichia albertii TW07627] Length = 268 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 84/309 (27%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + +D+ R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPITVRRGFPGDGEDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + +Q L++++ + + Sbjct: 90 RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPTKFPAKAQFYLNLQNYLETELKREN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + + F Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLLSWGLVDTFRHANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + ++ D ++ S Sbjct: 205 ETADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|148977573|ref|ZP_01814152.1| exonuclease III [Vibrionales bacterium SWAT-3] gi|145963224|gb|EDK28491.1| exonuclease III [Vibrionales bacterium SWAT-3] Length = 268 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 83/309 (26%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQAVIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K + Q +D R Sbjct: 42 -------FPIADVEAMGYKVYFHGQKAHYGVAMLCKQEPISVQKGFPTDNEDHQK----R 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+K+ VL+ F + + + L ++ + Sbjct: 91 MIMATFEDENGEKVTVLN-----GYFPQGDNIKHETKYPYKREFYKDLMTYLNDYHNNDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ ++ K + + F + Sbjct: 146 QIIVMGDINISPIDADIGIGEPNAKRWLKTGKCSFQPEEREWLKALMDWGFVDTFRQLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + D ++ S Sbjct: 206 EVTDQYSWFDYRSKGFLDNRGLRIDVVLATQKLADKCTEAGI-------DYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|188588970|ref|YP_001920998.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum E3 str. Alaska E43] gi|188499251|gb|ACD52387.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum E3 str. Alaska E43] Length = 258 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 48/291 (16%), Positives = 96/291 (32%), Gaps = 46/291 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+ + + R L+ + DI+ QE Sbjct: 1 MKVMTFNLRCDF-------FLDFNNRWDERKKLVFDVMNKYNCDIIGTQEATEKMFKDIS 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA--- 140 T+ I + I + KK+ + +++ L + + R+ Sbjct: 54 DNIETFNIIGNPRSKKL-------FSERNDILISKKHSIIENKTFWLHDNPEKYGRSRWY 106 Query: 141 --GNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT- 196 R +VE+ N K+I + + HL + + + L ++I Sbjct: 107 SMFPRICTTAIVELKNSKRIRICNSHLDFLLP------------QARAYELKKLSEFIKK 154 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD----SRCNANKNLR 252 ++++ +P +I GDFN N D + + K+KD + KN Sbjct: 155 EQEKEDLPLIIMGDFNSNPNSKLIKDFINGDVLNKRLVAVQDKKKDLYNNATMGNFKNKE 214 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY + + F I GK SDH P+ + + Sbjct: 215 KGSHIDYIFVSEE---------FEIIDVEIVKYNVNGKYPSDHYPLMAEIN 256 >gi|319902825|ref|YP_004162553.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] gi|319417856|gb|ADV44967.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] Length = 345 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 39/327 (11%), Positives = 93/327 (28%), Gaps = 55/327 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67 R++S+N+ L + + SL + + + + + Sbjct: 23 TFRVMSYNVENLFDCKHDSLKNDYEFLPDAVRHWNYAKYRKKLDNIARVIVAAGEWTPPA 82 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 +V + E+ + + + + + + + ++ I A+ ++ ++L Sbjct: 83 LVAMCEIENDSVMRDL---TQYSVLRESGYRYVMTQSSDERGIDVALLYQRNCFKLLSSQ 139 Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 L+ + SR R + + + +N + V +H S Y + + + Sbjct: 140 SLLVAKPQNDSR-PTRDILHVCGLLLNKDTLDVFAVHFPSRSGGAKESEIYRITAAKRLK 198 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK----- 241 A I Q + +I GDFN + P S P++ Sbjct: 199 AAADSLYRIRQHAQ----ILILGDFNDYPTDKSIRQILQAEVPPPASGTLHPRKLYHLLA 254 Query: 242 -----DSRCNANKNLRNKIPIDYFVMDQNAYK--------FLIQESFSE----------- 277 + K +D+ ++ N + F Sbjct: 255 NKAICQKDFGSYKYRGEWGLLDHIIVSGNLLDPNYPLYTSEAKADVFQRPFLLTEDKKYG 314 Query: 278 --ILYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P+ ++ Sbjct: 315 GKQPFRTYYGMKYQAGYSDHLPVWTEF 341 >gi|224584182|ref|YP_002637980.1| exonuclease III [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224468709|gb|ACN46539.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 268 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE ++ Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDEM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKATPISVRR-----GFPDDGEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + I V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSPLGNITVIN-----GYFPQGESRDHPLKFPAKAQFYQNLQNYLETELKCNN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + F + Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMSRLLKWGLVDTFRQANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + + D ++ S Sbjct: 205 QTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAERCAETGI-------DYDIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|126462083|ref|YP_001043197.1| exodeoxyribonuclease III [Rhodobacter sphaeroides ATCC 17029] gi|126103747|gb|ABN76425.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides ATCC 17029] Length = 259 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 88/302 (29%), Gaps = 68/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + L + + + D+V LQE+ S V + Sbjct: 1 MKIATFNING----------------VKARLEALLAWLEAAEPDVVLLQEIKS---VDEG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + +A+ + +D +R Sbjct: 42 FPR-------AAFEDKGWHLETHGQKGFNGVAILSRLPLEDVVRGLPGDPEDVQARW--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E V + + + V ++L + + Y + +K + + Sbjct: 92 --IEATV-VGERAVRVCGLYLPNGNPAPGPKYDYK------LGWMERMKARAAELLATEE 142 Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGD+N + ++ I F + + Sbjct: 143 PVVLAGDYNVIPQAEDAARPEVWVTDALFLPESRAAFRRILNLGYTEAFRARTFGPGHYS 202 Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 N I ID+ ++ A + D G++ SDH P+ + Sbjct: 203 FWDYQAGAWEKNNGIRIDHLLLSPQAADLMTDV-------RIDREVRSGEKPSDHVPVWV 255 Query: 301 DY 302 + Sbjct: 256 EL 257 >gi|154251594|ref|YP_001412418.1| endonuclease/exonuclease/phosphatase [Parvibaculum lavamentivorans DS-1] gi|154155544|gb|ABS62761.1| Endonuclease/exonuclease/phosphatase [Parvibaculum lavamentivorans DS-1] Length = 231 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 75/280 (26%), Gaps = 57/280 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R++SWNI+ ++G D + + + D DIV QE+ S + Sbjct: 6 LRVLSWNIHGGVGRDGRF-----------DLARIVRLVERHDPDIVAFQEVDSRGRLDGG 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P + + + A+ R SF R Sbjct: 55 APLSILKEALGEHAAEGRTISAPDGHYGHAVISRFPLSGTRVCDL-------SFRSREPR 107 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A+ +E + ++ HL S Q+ L D + + Sbjct: 108 CAISANIETPWGPLRLVTTHLGL-------------SIWERRLQSSMLVDLARE---EKL 151 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 P ++ GDFN ++ + P + + +D Sbjct: 152 PCIMMGDFNDWFSFGWVRRRLRAVL---------PSRTMEQTFPSAWPFL--RLDRIYCG 200 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 A + +SDH PI D Sbjct: 201 GAAA------------IVKSWTDEGAAPISDHLPIIADIS 228 >gi|300774356|ref|ZP_07084220.1| endonuclease/exonuclease/phosphatase [Chryseobacterium gleum ATCC 35910] gi|300507000|gb|EFK38134.1| endonuclease/exonuclease/phosphatase [Chryseobacterium gleum ATCC 35910] Length = 269 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 78/299 (26%), Gaps = 35/299 (11%) Query: 9 LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 +VF ++ +Q + ++S+NI E + + W + + D Sbjct: 1 MVFLMLFALGF-SQDLTVMSFNIRLNVESDKDNAWPKRKQD-------VADLLTYYHPDY 52 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 +QE + S T K+ Sbjct: 53 FGVQEALPEQMKDIKAGLKNYDYIGVGRDDGKEKGEFSAIFYDTNRLDVVKSGTFWLSET 112 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 P +K + A NR + + K L ++L F S L+ ++ Sbjct: 113 PEKPSK-GWDAALNRICTYAVFKDKKSKKEFLAMNLH---FDHIGNVARVKSSELILKKI 168 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + L +P ++GDFN + D+ + Sbjct: 169 KELN-------PKNLPVTLSGDFNLTDDSEPIKILSQNM---KDTFYHSETKHYGPVGTF 218 Query: 249 KNLR----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K IDY + S I D + SDH P+ + Sbjct: 219 TAFDVNTVPKDRIDYIF-----TQGFTIRSHRHIN----DRRENLLYPSDHFPVIVHLS 268 >gi|117620950|ref|YP_857462.1| exodeoxyribonuclease III [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562357|gb|ABK39305.1| exodeoxyribonuclease III [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 268 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 35/307 (11%), Positives = 74/307 (24%), Gaps = 72/307 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKIISFNINGL----------------RARLHQLKAIIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K V + + R Sbjct: 42 -------FPLADVEAMGYHVEFHGQKAHYGVAIMSKQKPVKVEK-----GFPTDDEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + E + I + + F + + + L+ ++ Sbjct: 90 RMIMATFEREDGSL----IKVMNGYFPQGESQDHETKFPAKQKFYEDLQRYLETHHTPSD 145 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 V+ GD N L ++ + + F Sbjct: 146 QLVLIGDMNISPTDLDIGIGEANRKRWLRDGKCSFLPIEREWMERLKGFGLTDTFRAANP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + C + ID + + D + S Sbjct: 206 TECERFSWFDYRSRGFDENRGLRIDLIMASDALKD-------TVTETGIDYELRGIDKPS 258 Query: 294 DHCPISI 300 DH PI Sbjct: 259 DHAPIWA 265 >gi|94499690|ref|ZP_01306227.1| exodeoxyribonuclease III [Oceanobacter sp. RED65] gi|94428444|gb|EAT13417.1| exodeoxyribonuclease III [Oceanobacter sp. RED65] Length = 271 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 87/312 (27%), Gaps = 74/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+VS+NIN + + L ADI+ LQE+ A +V Sbjct: 1 MRIVSFNING----------------VRARLHQIDAIKHQLKADIIGLQEV---KAAPEV 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P + I + + H +A N + Q G R Sbjct: 42 VP-------VADIEAIGYKADIHSQKAHYGVANLSLNPSIECQQ----GFPGDTDDDQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 NG+ + VL+ F + + LKD++ + Sbjct: 91 FIHSQYKLNNGEILHVLN-----GYFPQGENRQHETKFPAKRKYYADLKDYLNKHLSPDN 145 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 V+ GD N ++ ++ + I F + Sbjct: 146 HIVVMGDMNVALHDEDIGIGEQNRKRWLRTEKCAFLPEEREWLQGILDWGLADSFRTQHP 205 Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + IDY ++ ++ L + D ++ Sbjct: 206 DTNDRYSWFDYRSKGFADDPKRGLRIDYILLSKSLMSKLK-------TADIDYDIRGMEK 258 Query: 292 LSDHCPISIDYD 303 SDH PI ++ + Sbjct: 259 PSDHAPIYVELN 270 >gi|170019904|ref|YP_001724858.1| exonuclease III [Escherichia coli ATCC 8739] gi|253773296|ref|YP_003036127.1| exonuclease III [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|300818391|ref|ZP_07098601.1| exodeoxyribonuclease III [Escherichia coli MS 107-1] gi|300904608|ref|ZP_07122444.1| exodeoxyribonuclease III [Escherichia coli MS 84-1] gi|300924797|ref|ZP_07140737.1| exodeoxyribonuclease III [Escherichia coli MS 182-1] gi|300951354|ref|ZP_07165196.1| exodeoxyribonuclease III [Escherichia coli MS 116-1] gi|300958643|ref|ZP_07170767.1| exodeoxyribonuclease III [Escherichia coli MS 175-1] gi|301303958|ref|ZP_07210076.1| exodeoxyribonuclease III [Escherichia coli MS 124-1] gi|301327485|ref|ZP_07220718.1| exodeoxyribonuclease III [Escherichia coli MS 78-1] gi|301647945|ref|ZP_07247720.1| exodeoxyribonuclease III [Escherichia coli MS 146-1] gi|309793523|ref|ZP_07687950.1| exodeoxyribonuclease III [Escherichia coli MS 145-7] gi|331642351|ref|ZP_08343486.1| exodeoxyribonuclease III [Escherichia coli H736] gi|169754832|gb|ACA77531.1| exodeoxyribonuclease III [Escherichia coli ATCC 8739] gi|253324340|gb|ACT28942.1| exodeoxyribonuclease III [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|260449129|gb|ACX39551.1| exodeoxyribonuclease III [Escherichia coli DH1] gi|300314694|gb|EFJ64478.1| exodeoxyribonuclease III [Escherichia coli MS 175-1] gi|300403439|gb|EFJ86977.1| exodeoxyribonuclease III [Escherichia coli MS 84-1] gi|300419004|gb|EFK02315.1| exodeoxyribonuclease III [Escherichia coli MS 182-1] gi|300449344|gb|EFK12964.1| exodeoxyribonuclease III [Escherichia coli MS 116-1] gi|300529031|gb|EFK50093.1| exodeoxyribonuclease III [Escherichia coli MS 107-1] gi|300840755|gb|EFK68515.1| exodeoxyribonuclease III [Escherichia coli MS 124-1] gi|300845916|gb|EFK73676.1| exodeoxyribonuclease III [Escherichia coli MS 78-1] gi|301073916|gb|EFK88722.1| exodeoxyribonuclease III [Escherichia coli MS 146-1] gi|308123110|gb|EFO60372.1| exodeoxyribonuclease III [Escherichia coli MS 145-7] gi|315061052|gb|ADT75379.1| exonuclease III [Escherichia coli W] gi|315136390|dbj|BAJ43549.1| exonuclease III [Escherichia coli DH1] gi|315257443|gb|EFU37411.1| exodeoxyribonuclease III [Escherichia coli MS 85-1] gi|324016423|gb|EGB85642.1| exodeoxyribonuclease III [Escherichia coli MS 117-3] gi|331039149|gb|EGI11369.1| exodeoxyribonuclease III [Escherichia coli H736] Length = 272 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 82/312 (26%), Gaps = 73/312 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++ VS+NIN L + L + D++ LQE Sbjct: 2 AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +FP + ++ H +A+ K + + Sbjct: 43 DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEE 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + + + V++ F + +Q Q L++++ + + Sbjct: 91 AQRRIIMAEIPSLLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELK 145 Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239 P +I GD N L ++ + + F Sbjct: 146 RDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRH 205 Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + Q + ++ D + Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258 Query: 291 RLSDHCPISIDY 302 + SDH P+ + Sbjct: 259 KPSDHAPVWATF 270 >gi|161503598|ref|YP_001570710.1| exonuclease III [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864945|gb|ABX21568.1| hypothetical protein SARI_01677 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 268 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 82/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE ++ Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDEM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKATPISVRR-----GFPDDGEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + I V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSPLGNITVIN-----GYFPQGESRDHPLKFPAKAQFYQNLQNYLETELKCDN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + F + Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMSRLLKWGLVDTFRQANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + + + D ++ S Sbjct: 205 ETVDKFSWFDYRSKGFVDNRGLRIDLLLASRPLAERCAETGI-------DYDIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|325300418|ref|YP_004260335.1| Endonuclease/exonuclease/phosphatase [Bacteroides salanitronis DSM 18170] gi|324319971|gb|ADY37862.1| Endonuclease/exonuclease/phosphatase [Bacteroides salanitronis DSM 18170] Length = 283 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 38/308 (12%), Positives = 79/308 (25%), Gaps = 33/308 (10%) Query: 1 MIRKYV-LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 M R ++ +A++ AQ + ++NI + + + W+ + + Sbjct: 1 MKRLFLAIAVITSAFFFLPCQAQTITWATFNIRYDNPADQSNNWQFRK-------DTVTR 53 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 + + D DIV +QE+ + + + Sbjct: 54 FIQAQDMDIVGMQEVLHNQLEDLLQRLPGYKSIGVGRDDGKTKGEYAPILYKEDRFEVLD 113 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 + YP + A R A ++ + ++ F Sbjct: 114 SNTFWLSQYPDSIGFIGWDGACTRIATWAKMKDRQSGKIFMAVNTH---FDHVGVTARRE 170 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 L+ ++ + + P V+ GDFN D+ K Sbjct: 171 GALLIIRKIKEIV--------GDRPAVLTGDFNVNDQSEAYRTITSNAFVLKDAAKIAGK 222 Query: 240 EKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + N ID+ + + + K LSD Sbjct: 223 QTGVD-YTFHNFGQIPSEQCEKIDFIFVTPQIKVL--------DSFIPKEAAPGSKFLSD 273 Query: 295 HCPISIDY 302 H P + Sbjct: 274 HNPQIVHL 281 >gi|302530966|ref|ZP_07283308.1| large secreted protein [Streptomyces sp. AA4] gi|302439861|gb|EFL11677.1| large secreted protein [Streptomyces sp. AA4] Length = 696 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 34/326 (10%), Positives = 76/326 (23%), Gaps = 65/326 (19%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++ + ++N+ L+ + + + + DIV L+E+ + Sbjct: 365 PGELSVATYNVENLAPSDSDTKYAQLAHGIVDNLAT---------PDIVTLEEIQDNSGA 415 Query: 81 AK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR------ 117 V + + + +I Sbjct: 416 TDDGTVDADATLKKFTDTIVAAGGPQYQWRQINPVNDEDGGQPGGNIRVGFLFNPARVSF 475 Query: 118 ---------------KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 + + P + + +R+ + G+ ++VL Sbjct: 476 VDRPGGSPTSSVGVVSDHGKAHLTQSPGRVDPGNEAWEDSRKPLAGEFVFRGRTVFVLAN 535 Query: 163 HLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKIN 216 H S Y P S +QA L+ ++ Q + V+AGD N Sbjct: 536 HFNSKGGDQPTHGRYQPPTRSSEVQRQKQATVLQGFVAQLLGADPRANVVVAGDLNDYQF 595 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 K + + +D+ + Sbjct: 596 SP----ALAKLTSGGLLKDLISTLPPAERYSYVYEGQSQVLDHILASGAPRG-------- 643 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P + + Sbjct: 644 VDYDVVHVNAEFADQASDHDPQVVRF 669 >gi|300930770|ref|ZP_07146143.1| exodeoxyribonuclease III [Escherichia coli MS 187-1] gi|300461403|gb|EFK24896.1| exodeoxyribonuclease III [Escherichia coli MS 187-1] Length = 272 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 82/312 (26%), Gaps = 73/312 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++ VS+NIN L + L + D++ LQE Sbjct: 2 AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +FP + ++ H +A+ K + + Sbjct: 43 DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEE 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + + + V++ F + +Q Q L++++ + + Sbjct: 91 AQRRIIMAEIPSLLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQHLQNYLETELK 145 Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239 P +I GD N L ++ + + F Sbjct: 146 RDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRH 205 Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + Q + ++ D + Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258 Query: 291 RLSDHCPISIDY 302 + SDH P+ + Sbjct: 259 KPSDHAPVWATF 270 >gi|256824430|ref|YP_003148390.1| Exodeoxyribonuclease III [Kytococcus sedentarius DSM 20547] gi|256687823|gb|ACV05625.1| Exodeoxyribonuclease III [Kytococcus sedentarius DSM 20547] Length = 281 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 36/312 (11%), Positives = 84/312 (26%), Gaps = 76/312 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ +WN+N+L + + ++ + + D++ LQE + A Sbjct: 1 MRIATWNVNSL----------------RARLDRVAEFLQRHEVDVLALQETKVQDDKFPA 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F + + I + + +A+ + + + Sbjct: 45 ERFAELGYEIAFH------------GLNQWNGVAIASRVGLEDVTV--AFPDQPGWGDEP 90 Query: 142 NRRAVELLVEINGKK---------IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 A L + G+ I + +++ + + Y L Sbjct: 91 VVEARALGATVGGQPRADGSATPRIRLWSLYVPNGREIGHPHMDYK------VGWLDTLA 144 Query: 193 DWITQKKESLVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRF 237 +P + GDFN + ++ + Sbjct: 145 GHAGTWAGEDLPLALVGDFNVAPLDTDVWDIAAFEGHTHVTEPERAAFQGFLDAGLVDVV 204 Query: 238 PKEKDSRCNANKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + R + ID+ + Q + D + +GK Sbjct: 205 RPHTEPDTFTYWDYQQLRFPKRQGMRIDFVLGSQPFADRVTGAFV-------DREERKGK 257 Query: 291 RLSDHCPISIDY 302 SDH P+ +D Sbjct: 258 GASDHAPVVVDL 269 >gi|256822581|ref|YP_003146544.1| endonuclease/exonuclease/phosphatase [Kangiella koreensis DSM 16069] gi|256796120|gb|ACV26776.1| Endonuclease/exonuclease/phosphatase [Kangiella koreensis DSM 16069] Length = 248 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 77/288 (26%), Gaps = 51/288 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K++++++NI+ + + + ++ DADI+ LQE+ ++ Sbjct: 2 KLKVITYNIHRAIGVDRRFRP-----------ERIVEILESYDADIIALQEVDDGVPRSR 50 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 K S H A + V +++ L Sbjct: 51 ELNLAKELAEALDFPYYVLGKNVSLKKGHYGNATLSRYPIVRERNIDLTI-----DNKKR 105 Query: 143 RRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R ++I K++ + +L S +Q Q L K Sbjct: 106 RGCQHTTIDIPSSPSKEVHLEVFNLHLGL-----------SAKERDKQIQKLLHSSEYNK 154 Query: 200 -ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR----CNANKNLRNK 254 +I GDFN K + + + + + Sbjct: 155 LNEDSNKLIIGDFNDW------RSLLRKPLTEEAGFLCATDRRYKNKVSALKTYPSFSPR 208 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + + K K SDH P+ ++ Sbjct: 209 GGLDRIFYQGDLKLKNVF----------LCRKKLSKVASDHKPVIAEF 246 >gi|205352972|ref|YP_002226773.1| exonuclease III [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857189|ref|YP_002243840.1| exonuclease III [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|205272753|emb|CAR37670.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206708992|emb|CAR33322.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326628046|gb|EGE34389.1| exonuclease III [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 268 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE ++ Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDEM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKATPISVRR-----GFPDDGEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + I V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSPLGNITVIN-----GYFPQGENRDHPLKFPAKAQFYQNLQNYLETELKCDN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + F + Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMSRLLKWGLVDTFRQANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + + D ++ S Sbjct: 205 QTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAERCAETGI-------DYDIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|160890824|ref|ZP_02071827.1| hypothetical protein BACUNI_03269 [Bacteroides uniformis ATCC 8492] gi|317479743|ref|ZP_07938865.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] gi|156859823|gb|EDO53254.1| hypothetical protein BACUNI_03269 [Bacteroides uniformis ATCC 8492] gi|316904113|gb|EFV25945.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] Length = 249 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 86/301 (28%), Gaps = 60/301 (19%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M R L+++F L+ + AQ+V ++S+N++ + +Y + Sbjct: 1 MKRNLFLSVLFVLM-FAPAHAQQVNILSYNVHNCIGMDK-----------EYNYRRIANV 48 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 DIV LQE+ S K + ++ I + + Sbjct: 49 ISQTSPDIVALQELDSVTVRNKGIHALGELEKLTGM-HGTYAAAIPFQGGSYGIGILSRE 107 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + + + P+ G R R + + +V +S D Sbjct: 108 IPIKYKIIPMPG------REEKRTLIIAEFKD-----YVFCATHQSLTPED--------- 147 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + + P +AGD N + + F Sbjct: 148 ------QLLAVPLIEKALQNVDKPIFMAGDMNSAPASVP----------QLELAKHFATL 191 Query: 241 KDSRCNANKNLRNKIPIDYFV-MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 D+ R IDY +N Y+F +Q SDH P+ Sbjct: 192 NDTTSYTFPADRPNRCIDYIYGYSKNGYRFDVQ----------YRKVIEDTISSDHRPVQ 241 Query: 300 I 300 + Sbjct: 242 V 242 >gi|163746501|ref|ZP_02153859.1| exodeoxyribonuclease III, putative [Oceanibulbus indolifex HEL-45] gi|161380386|gb|EDQ04797.1| exodeoxyribonuclease III, putative [Oceanibulbus indolifex HEL-45] Length = 260 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 86/302 (28%), Gaps = 67/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ S+NIN + L ++ D+V LQE+ S V + Sbjct: 1 MKIASFNING----------------IKARAAALPEWLDEAQPDVVVLQEIKS---VDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ ++ +A+ K +D +R Sbjct: 42 FPREM-------LEERGYNVETHGQKSFNGVAILSKLPLEDVTRGLPGDDEDDQARW--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E V + + V ++L + + + Y + L+ Sbjct: 92 --IEATVVGDDMALRVCGLYLPNGNPVPGPKYDYKLA------WMARLQARAEALLAEET 143 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF++AGD+N + + W+ + F + + Sbjct: 144 PFLMAGDYNIIPQAEDAAKPDSWREDALFRPESRAAWRRLVNLGLTDAFRARTQGPGHYS 203 Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 N I ID+F++ L D + SDH P+ + Sbjct: 204 FWDYQAGAWNRNNGIRIDHFLLSPTVADRLRDCQI-------DRDVRGRDKPSDHVPVWV 256 Query: 301 DY 302 + Sbjct: 257 EL 258 >gi|77463209|ref|YP_352713.1| exodeoxyribonuclease III [Rhodobacter sphaeroides 2.4.1] gi|77387627|gb|ABA78812.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides 2.4.1] Length = 259 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 88/302 (29%), Gaps = 68/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + L + + + D+V LQE+ S V + Sbjct: 1 MKIATFNING----------------VKARLEALLAWLEAAEPDVVLLQEIKS---VDEG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + +A+ + +D +R Sbjct: 42 FPR-------AAFEDKGWHLETHGQKGFNGVAILSRLPLEDVVRGLPGDPEDVQARW--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E V + + + V ++L + + Y + +K + + Sbjct: 92 --IEATV-VGERAVRVCGLYLPNGNPAPGPKYDYK------LGWMERMKARAAELLATEE 142 Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGD+N + ++ I F + + Sbjct: 143 PVVLAGDYNVIPQAEDAARPEVWVTDALFLPESRAAFRRIVNLGYTEAFRARTFGPGHYS 202 Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 N I ID+ ++ A + D G++ SDH P+ + Sbjct: 203 FWDYQAGAWEKNNGIRIDHLLLSPQAADLMTDV-------RIDREVRSGEKPSDHVPVWV 255 Query: 301 DY 302 + Sbjct: 256 EL 257 >gi|3044072|gb|AAC13276.1| beta-hemolysin [Staphylococcus schleiferi] Length = 329 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 53/323 (16%), Positives = 99/323 (30%), Gaps = 43/323 (13%) Query: 7 LALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 L L+ + TA A+ ++LV+ N+ L + L+ N + +D Y Sbjct: 18 LFLLGLSIQSTAHAAKPVDNNELKLVTHNVYMLPKS----LYPNWGQSIRADLISQSFYI 73 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------A 113 K D+V L E +A ++ + T L + + Sbjct: 74 KGN--DVVILNEAFDNSASNQLLNNLKNEYPHQTGVLGRSRSGWDSTEGSYSSTVLEDGG 131 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 +AV K + + F N+ V +E +GK V+ H ++ Sbjct: 132 VAVVSKYPIKERIQHVFRRGC-GFDNDSNKGFVYTKIEKDGKNFHVIGTHTQAEDSRCGA 190 Query: 174 ENTYSPSCSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINY-LGNNDDFWKTIDPN 231 + ++Q + + ++ + I GD N N G D K ++ N Sbjct: 191 GYDR----EIRAEQMREISTFVKNKNIPKDEVVYIGGDLNVNKNSTSGEFQDMLKNLNVN 246 Query: 232 DSLIRFPKEKDSRCNANKNLRN-----KIPIDYFVMDQNAYK---------FLIQESFSE 277 D + N +DY +D++ + S+ Sbjct: 247 DVTYKGHTSTWDPETNYIAQYNFPNAKPEYLDYIFVDKDHRQPGQLINEAIDAKAPSWHV 306 Query: 278 ILYNEDDIKSRGKRLSDHCPISI 300 + SDH P+S Sbjct: 307 YAFP---YTYYYNDFSDHYPVSA 326 >gi|325859957|ref|ZP_08173084.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola CRIS 18C-A] gi|325482483|gb|EGC85489.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola CRIS 18C-A] Length = 356 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 40/332 (12%), Positives = 90/332 (27%), Gaps = 46/332 (13%) Query: 3 RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSE-------QEGVSLWKNSVKRTT---- 51 + +L LVF L+ ++ ++ +V N L + + L + T Sbjct: 32 MRTLLILVFTLLSVPSAAQSRLTIVELNAENLFDTRHDTLKNDYEFLPDSPRHWTRTKYW 91 Query: 52 SDYTLLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103 Q DIV L E+ + + + + ++ + + Sbjct: 92 EKLNRTGQTIIACGEDSSGWHLPDIVGLCEVENDSVLFDLTRRS-----LLRKARYEYVM 146 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDI 162 S++ +A+ + R + + EI NG + V + Sbjct: 147 TASDDRRGIDVALLYSPFSFRLIKADTIHVAPMADMRPTRDILHVEGEIENGDTLHVFLL 206 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 H S + + + L QA + + ++ GDFN + Sbjct: 207 HAPSRMGGERYSRPFRLYVAGLLCQAVDSLRSL----YADPRILVMGDFNDYADSPSVRL 262 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS------ 276 + + + + +D ++ +N ++I Sbjct: 263 LCTRGFVN---VSARAHGNNGAKGTYRYHGAWGSLDQILVSENLCPWVISCHVHDAAFLL 319 Query: 277 --------EILYNEDDIKSRGKRLSDHCPISI 300 + SDH P+ + Sbjct: 320 EEDDKYGGVKPRRNYNGMRYNNGFSDHLPLVL 351 >gi|270295831|ref|ZP_06202031.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270273235|gb|EFA19097.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 249 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 85/301 (28%), Gaps = 60/301 (19%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M R L+++F L+ + AQ+V ++S+N++ + +Y + Sbjct: 1 MKRNLFLSVLFVLM-FAPAHAQQVNILSYNVHNCIGMDK-----------EYNYRRIANV 48 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 DIV LQE+ S K + ++ I + + Sbjct: 49 ISQTSPDIVALQELDSVTVRNKRIHALGELEKLTGM-HGTYAAAIPFQGGSYGIGILSRE 107 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + + + P+ G R R + + +V +S D Sbjct: 108 IPIKYKIIPMPG------REEKRTLIIAEFKD-----YVFCATHQSLTPED--------- 147 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + + P +AGD N + F Sbjct: 148 ------QLLAVPLIEKALQNVDKPIFMAGDMNSAPASAP----------QLELAKHFATL 191 Query: 241 KDSRCNANKNLRNKIPIDYFV-MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 D+ R IDY +N Y+F +Q SDH P+ Sbjct: 192 NDTTSYTFPADRPNRCIDYIYGYSKNGYRFDVQ----------YRKVIEDTISSDHRPVQ 241 Query: 300 I 300 + Sbjct: 242 V 242 >gi|327191803|gb|EGE58803.1| exodeoxyribonuclease III protein [Rhizobium etli CNPAF512] Length = 263 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 101/306 (33%), Gaps = 70/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + L Q+ K+ D DIV LQE+ + + + Sbjct: 1 MKIATWNING----------------VKARIDNLTQWLKDSDPDIVCLQEIKT---IDEG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + +A+ K+ A D +R Sbjct: 42 FPRLE-------IEALGYHVETHGQKGFNGVAILSKSSPSEVNRGLPGDALDEQARF--- 91 Query: 144 RAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +E + + +I V I+L + +++ + Y + + L+ + ++ + Sbjct: 92 --LEAVFTLPDTRILRVCCIYLPNGNPVETEKYPYKLA------WMERLRSFAAERLDYE 143 Query: 203 VPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 V+AGD+N +L + ++ ++ N L + Sbjct: 144 EMLVLAGDYNVIPEPHDCFDPKVWENDALFLPQTREAFRKLE-NLGLTDAVRATTDATQL 202 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ A + + + + ++ SDH P+ Sbjct: 203 YSFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIEKHV-------RAWEKPSDHVPV 255 Query: 299 SIDYDF 304 +DF Sbjct: 256 IAYFDF 261 >gi|32472775|ref|NP_865769.1| signal peptide [Rhodopirellula baltica SH 1] gi|32444012|emb|CAD73454.1| hypothetical protein-signal peptide prediction [Rhodopirellula baltica SH 1] Length = 284 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 80/285 (28%), Gaps = 30/285 (10%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + +R+V++NI L S L D DI+ E S Sbjct: 29 SPKPLRVVAYNIYNLKGWPSQSPLAQQAVARGQMAKRLAMELALYDPDIINFSESPSEKL 88 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 +V NH + S + + + K K+ F+R Sbjct: 89 TKEVAELLGM----------NHVRFPSGGNWPGTLLSKSKISDSQNAPMNGERPKELFTR 138 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R VEL N + + V HL + ++ + + + Sbjct: 139 HWGRALVEL---PNDEPLIVHSAHLYPTPEPT-----------IRLREIRAMIKSMKSDL 184 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 +S ++ GD N + + F K + K + IDY Sbjct: 185 DSGRSMLLIGDLNHSPDTDEYKLW-----KDAGWIDTFAKVGEGNGFTIKADNPEWRIDY 239 Query: 260 FVMDQNAYKFL-IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K + E + ++ + LSDH P +D Sbjct: 240 VFATGPIAKRVGESRPLFEGAFRVNNEDEKSYALSDHLPQLAVFD 284 >gi|294670922|ref|ZP_06735778.1| hypothetical protein NEIELOOT_02626 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307409|gb|EFE48652.1| hypothetical protein NEIELOOT_02626 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 261 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 33/303 (10%), Positives = 83/303 (27%), Gaps = 73/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + + DI+ LQE Sbjct: 1 MKIATWNVNSLN----------------VRLPQVQNWLADHRPDILALQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ + + + R Sbjct: 35 LKLDQDKFPAAALQMMGWHSVWSGQKTYNGVAIISRGEPQDVHT-----GLPTLPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + +++++ + LDS + Y Q L +++ + Sbjct: 90 RVIAATVN----GVRIVNVYCVNGEALDSPKFQYKE------QWFAALTEFLRNELSRHE 139 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GDFN +++ + + Sbjct: 140 KLILLGDFNIAPADADCYAPEKWHEKILCSSIERQWFQNLLDLGLTDSLRQIHPEGAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ + + L D +R SDH P+ Sbjct: 199 TWFDYRGAMFQRKQGLRIDHILTSRTMASALQD-------MQVDYDTRALERPSDHAPVW 251 Query: 300 IDY 302 + Sbjct: 252 AQF 254 >gi|84386405|ref|ZP_00989433.1| putative phospholipase C precursor [Vibrio splendidus 12B01] gi|84378829|gb|EAP95684.1| putative phospholipase C precursor [Vibrio splendidus 12B01] Length = 448 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 47/290 (16%), Positives = 96/290 (33%), Gaps = 26/290 (8%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + ++++N+ L+ + S ++ K DA + QE+ + + Sbjct: 172 NSINILTYNVWALNPLGISGIVSRSAN---ERLKQIKDKVKGYDA--IVFQELFDNSERS 226 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + S D I + +Q ++ D + Sbjct: 227 IFLNALKSEY---PYQTRVVDRAGSPEDGGVLIVSHWPIEKEVQMTFDQCAGSDCLA--- 280 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 ++ + + G + H +++ ++ +QQ + ++ +I + + Sbjct: 281 SKGVIYAKINKGGNPYHIFGTHPQAWS--------TKEGRAVRAQQFEQMRAFIDAQYIN 332 Query: 202 L-VPFVIAGDFN-RKINYLGNNDDFWKTIDPND--SLIRFPKEKDSRCNANKNL---RNK 254 P VIAGD N KI YL +D KT+ + +P D NA + K Sbjct: 333 GAEPVVIAGDLNVDKIKYLPEYEDMLKTLVSEEVPRFKSYPYTFDGAVNAWVTDEEKKQK 392 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +DY + + S I + + LSDH +S F Sbjct: 393 EYLDYVLYSTSHLSPDSSSSKVIIPRSTNVDLFTKYDLSDHFAVSARLTF 442 >gi|77360282|ref|YP_339857.1| exonuclease III [Pseudoalteromonas haloplanktis TAC125] gi|76875193|emb|CAI86414.1| exonuclease III [Pseudoalteromonas haloplanktis TAC125] Length = 268 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 78/309 (25%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ DI+ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQAIIDKHQPDIIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K G + R Sbjct: 42 -------FPLEDVQKMGYHVYYHGQKAHYGVAMLCKKEPKSV----FKGFATDTEESQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+ + V++ F + Q + L + Sbjct: 91 MISVTVEQDNGRDLTVMN-----GYFPQGENINHETKFPYKRQFYKDLMTHLQTNHTPDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ ++ T+ F ++ Sbjct: 146 DVIVMGDINISPTNLDIGIGEVNAKRWLKTGKCSFQPIEREWLATLLNWGFKDTFREQNP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + I D ++ S Sbjct: 206 ETSDQYSWFDYRSKGFLDNRGLRIDVVLATHELAARCIDTGI-------DYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI ++ Sbjct: 259 DHAPIWSEF 267 >gi|298386270|ref|ZP_06995826.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 1_1_14] gi|298260647|gb|EFI03515.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 1_1_14] Length = 373 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 38/328 (11%), Positives = 91/328 (27%), Gaps = 57/328 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSV-----------KRTTSDYTLLRQYAKNLD----AD 67 R++SWN+ L + +L ++ + + + + Sbjct: 52 PFRVMSWNVENLFDTHHDTLKNDNEFLPDAIRHWNYTKYKKKLADMARVITAVGEWNPPA 111 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 +V L E+ + + + + ++ + + I A+ ++ ++L Sbjct: 112 LVGLCEVENDSVLRDLTRRSPLKELSYRYVMTSSPDL---RGIDVALLYQRDLFKLLS-- 166 Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYS-PSCSLLS 185 + + R + + + + G + V+ HL S Y + +L Sbjct: 167 FRSIPIPSFKHHRPTRDLLHVSGLLLTGDTLDVIVCHLPSRSGGAKESEPYRLHAARILR 226 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT---------IDPNDSLIR 236 +A L + VI GDFN + T + Sbjct: 227 TEADSLLN-----IRLHPQLVIMGDFNDYPTNKSIKEILEATDPQQSVTFPNPRKLYHLL 281 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL---------------------IQESF 275 K + K +D+ ++ N ++ Sbjct: 282 ARKATSRHFGSYKYHGKWGLLDHLIVSGNLLDTSSKFFTGEDKATVARLPFLLTEDKKYG 341 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +SDH P+ D++ Sbjct: 342 DDEPFRTYKGMKYQGGISDHLPVYADFE 369 >gi|167624545|ref|YP_001674839.1| exonuclease III [Shewanella halifaxensis HAW-EB4] gi|167354567|gb|ABZ77180.1| exodeoxyribonuclease III [Shewanella halifaxensis HAW-EB4] Length = 268 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 91/310 (29%), Gaps = 72/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L+ DI+ LQE + Sbjct: 1 MKIVSFNINGL----------------RARLHQLQALIDTHQPDIIGLQE---TKVHDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + H +A+ K + Q +D A R Sbjct: 42 FP-------LADVEAMGYHVHYHGGKAHYGVAMLSKAEPIKVQKGFPTDEED----AQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ NG+ + V++ F ++ + + L ++ + + Sbjct: 91 MIMGTFMQENGRPLTVIN-----GYFPQGDNISHETKYPAKRKFYKDLMQYLNEYHSADE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 I GD N ++ ++ KT+ + F + Sbjct: 146 DIAIIGDINISPVDLDIGIGEPNAKRWLKTGKCSFQPEEREWLKTLMDWGLVDTFRELHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 +R + ID + ++ + L + + D ++ S Sbjct: 206 TRSERYSWFDYRSKGFVDNRGLRIDVILATKSLAQHLTES-------DVDYELRGIEKPS 258 Query: 294 DHCPISIDYD 303 DH PI + Sbjct: 259 DHAPIWSSFS 268 >gi|16760593|ref|NP_456210.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764653|ref|NP_460268.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29141647|ref|NP_804989.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56413712|ref|YP_150787.1| exonuclease III [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161614297|ref|YP_001588262.1| exonuclease III [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167552346|ref|ZP_02346099.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167991882|ref|ZP_02572981.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168233217|ref|ZP_02658275.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168238968|ref|ZP_02664026.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168244409|ref|ZP_02669341.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263883|ref|ZP_02685856.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194446222|ref|YP_002040559.1| exonuclease III [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449710|ref|YP_002045308.1| exonuclease III [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194471225|ref|ZP_03077209.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194733972|ref|YP_002114319.1| exonuclease III [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197250009|ref|YP_002146737.1| exonuclease III [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264133|ref|ZP_03164207.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197362635|ref|YP_002142272.1| exonuclease III [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198244728|ref|YP_002215824.1| exonuclease III [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389740|ref|ZP_03216351.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204927863|ref|ZP_03219064.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|213023056|ref|ZP_03337503.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213162974|ref|ZP_03348684.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213427783|ref|ZP_03360533.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213581312|ref|ZP_03363138.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213612544|ref|ZP_03370370.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213648612|ref|ZP_03378665.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213850398|ref|ZP_03381296.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|60392242|sp|P0A1A9|EX3_SALTY RecName: Full=Exodeoxyribonuclease III; Short=EXO III; Short=Exonuclease III; AltName: Full=AP endonuclease VI gi|60392243|sp|P0A1B0|EX3_SALTI RecName: Full=Exodeoxyribonuclease III; Short=EXO III; Short=Exonuclease III; AltName: Full=AP endonuclease VI gi|25289127|pir||AC0710 exodeoxyribonuclease III (EC 3.1.11.2) [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|4324669|gb|AAD16979.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16419819|gb|AAL20227.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502889|emb|CAD02052.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Typhi] gi|29137275|gb|AAO68838.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56127969|gb|AAV77475.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161363661|gb|ABX67429.1| hypothetical protein SPAB_02042 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404885|gb|ACF65107.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408014|gb|ACF68233.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194457589|gb|EDX46428.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194709474|gb|ACF88695.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197094112|emb|CAR59612.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197213712|gb|ACH51109.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197242388|gb|EDY25008.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197288283|gb|EDY27668.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197939244|gb|ACH76577.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602185|gb|EDZ00731.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204323205|gb|EDZ08401.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205323022|gb|EDZ10861.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329685|gb|EDZ16449.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205332615|gb|EDZ19379.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336751|gb|EDZ23515.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205347536|gb|EDZ34167.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261246511|emb|CBG24321.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993174|gb|ACY88059.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157839|emb|CBW17333.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912288|dbj|BAJ36262.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321223927|gb|EFX48990.1| Exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616690|gb|EFY13599.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619793|gb|EFY16667.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622362|gb|EFY19207.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627886|gb|EFY24676.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633016|gb|EFY29759.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636738|gb|EFY33441.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641236|gb|EFY37877.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645225|gb|EFY41754.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650167|gb|EFY46581.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655740|gb|EFY52042.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660066|gb|EFY56305.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665367|gb|EFY61555.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669646|gb|EFY65793.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673551|gb|EFY69653.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677477|gb|EFY73541.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679858|gb|EFY75897.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687330|gb|EFY83302.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323129573|gb|ADX17003.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323192448|gb|EFZ77678.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198697|gb|EFZ83798.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204125|gb|EFZ89139.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208743|gb|EFZ93681.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210257|gb|EFZ95156.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217719|gb|EGA02434.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220274|gb|EGA04729.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227561|gb|EGA11719.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229522|gb|EGA13645.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232745|gb|EGA16841.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240216|gb|EGA24260.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242796|gb|EGA26817.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249113|gb|EGA33032.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254387|gb|EGA38204.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257176|gb|EGA40879.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263503|gb|EGA47031.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267084|gb|EGA50569.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271592|gb|EGA55013.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326623571|gb|EGE29916.1| exonuclease III [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332988190|gb|AEF07173.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 268 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE ++ Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDEM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKATPISVRR-----GFPDDGEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + I V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSPLGNITVIN-----GYFPQGESRDHPLKFPAKAQFYQNLQNYLETELKCDN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + F + Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMSRLLKWGLVDTFRQANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + + D ++ S Sbjct: 205 QTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAERCAETGI-------DYDIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|28414377|gb|AAO40752.1| sphingomyelin-specific phospholipase [Bacillus cereus] Length = 333 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 91/272 (33%), Gaps = 31/272 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + +I GD N +KT++ + Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGHTA 257 Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAY 267 N +DY + ++ Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHA 289 >gi|321468777|gb|EFX79760.1| hypothetical protein DAPPUDRAFT_3216 [Daphnia pulex] Length = 288 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 48/294 (16%), Positives = 98/294 (33%), Gaps = 23/294 (7%) Query: 24 VRLVSWNI--NTLSEQ-EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +RL+ WNI +L E + + + + + DI+ LQE+ Y + Sbjct: 1 IRLLQWNILSQSLGEHNDNFVRCPLEALDWRTRRYRIVEEIVEYNPDIICLQEVDHYQFL 60 Query: 81 AKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 ++ + Y + + +N AI R + +++ ++ S Sbjct: 61 SRALRSQGYEGIYFPKPDSPCIYIKGNNGPDGCAIFYRANDYELIKVETRIVEVWRVQSN 120 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 L + +G++I V HLK+ + +L ++Q + + D++ Sbjct: 121 QVV-ILTMLRHKASGREICVATTHLKA--------RQGALLSTLRNEQGKDILDFLQNNV 171 Query: 200 E-SLVPFVIAGDFNRKINYL---GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + + P ++AGDFN + D D E+ + + + Sbjct: 172 DVADCPIIMAGDFNAEPTEPVYSTIRSDSRFGFDSAYRCDVDGAEEAGQEPPYTTWKVRG 231 Query: 256 ------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY + F D + SDH + +D+D Sbjct: 232 EGESCHTIDYVFFSRRQLGVNQVLPFPTGEQIGPDRVPSFQYPSDHFSLVVDFD 285 >gi|168463303|ref|ZP_02697234.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168821944|ref|ZP_02833944.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|195634571|gb|EDX52923.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205341658|gb|EDZ28422.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] Length = 268 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE ++ Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDEM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKATPISVRR-----GFPDDGEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + I V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSPLGNITVIN-----GYFPQGESRDHPLKFPAKAQFYQNLQNYLETELKCDN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + F + Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMSRLLKWGLVDTFREANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + + D ++ S Sbjct: 205 QTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAERCAETGI-------DYDIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|186681878|ref|YP_001865074.1| outer membrane adhesin like proteiin [Nostoc punctiforme PCC 73102] gi|186464330|gb|ACC80131.1| putative outer membrane adhesin like proteiin [Nostoc punctiforme PCC 73102] Length = 2156 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 44/328 (13%), Positives = 89/328 (27%), Gaps = 50/328 (15%) Query: 15 PCTAS-VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT------SDYTLLRQYAKNLDAD 67 P T V +++ S+N+ G + + + Q D Sbjct: 1293 PVTPPNVGGTLKVASFNVLNFFNGNGTGGGFPTSRGAENLIELNRQRNKIIQAIVTSGVD 1352 Query: 68 IVFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 +V L+E+ + +A+ + T IN + ++I + + Sbjct: 1353 VVGLEELENDGYGSTSAIQDLVNGLNAVAGAGTYSFINPGTSLATDEITVGLIYKSGK-- 1410 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSP- 179 V + R+ + NG++ V+ H KS Sbjct: 1411 VTPVGAAATLTTSAAFNLVGRQPLAQTFGQNSNGEQFTVVVNHFKSKGSSSGGVGDADAG 1470 Query: 180 -----SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 S ++QAQ L W+ K + +++ GD N T+ Sbjct: 1471 DGQGFSNGTRTRQAQDLAAWLATKPTGTNDTDYLVVGDLNSYAKEDP-----LTTLAGAG 1525 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG--- 289 P + +D+ + + + I +E + Sbjct: 1526 YNNLLPD----TSYSYVFDGQVGSLDHALATSSLAAQVSGAEKWHINADEPSVLDYNTNF 1581 Query: 290 --------------KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 1582 KSAGQISSLYNADQFRASDHDPVLVGLN 1609 >gi|289641553|ref|ZP_06473715.1| exodeoxyribonuclease III Xth [Frankia symbiont of Datisca glomerata] gi|289508648|gb|EFD29585.1| exodeoxyribonuclease III Xth [Frankia symbiont of Datisca glomerata] Length = 425 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 84/308 (27%), Gaps = 71/308 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNA 79 + VR+ +WNIN + L ++ D+V LQE S A Sbjct: 79 SDGVRVATWNIN----------------SAKARQARLIEWLDRAQPDVVCLQETKLSDAA 122 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 ++F ++ + + + +A+ + ++ L F Sbjct: 123 FLELFDEDLFR--------RGYRVAHHGDGRWNGVAIFSRAGLDDVEA--GLADGPGFPA 172 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R A+ I + +++ + +D Y L+ + + Sbjct: 173 PEPR-ALAATC----GGIRIWSLYVPNGRAVDDPHYAYK------LTWLAALRASVEKAL 221 Query: 200 ESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSR 244 + P + GDFN D + + + + + Sbjct: 222 -TTAPVIACGDFNIAPTDADVWDPAAFAGATHVTDAERRALRELTDLGLVDVMRR-RWPD 279 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + ID + + + D +G SDH Sbjct: 280 EQVFTYWDYRALMFPKNMGMRIDLLLASDSLVDRVRAVWV-------DRQARKGTGTSDH 332 Query: 296 CPISIDYD 303 P+ +D D Sbjct: 333 APVIVDLD 340 >gi|73540991|ref|YP_295511.1| exodeoxyribonuclease III [Ralstonia eutropha JMP134] gi|72118404|gb|AAZ60667.1| Exodeoxyribonuclease III [Ralstonia eutropha JMP134] Length = 275 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 37/314 (11%), Positives = 86/314 (27%), Gaps = 65/314 (20%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQ 72 + + +R+ SWN+N+L R L + + D + LQ Sbjct: 1 MSAVLPTSGPLRIASWNVNSL------------KVRLPQVLQWLTEQEQAGAPIDALCLQ 48 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ P + + + + + +A+ ++ + ++ Sbjct: 49 ELK--------LPDDKYP--LAELENAGFHSVYTGQKTYNGVAILARDAS-MPGPVDVVR 97 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 F A R +V I ++ + + DS + Y + + Sbjct: 98 NIPGFEDAQQR-----VVAATYGDIRLVCAYFPNGQAPDSDKFVYK------LKWLDAMT 146 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIR----------FP 238 W+ ++ + GDFN +D + P + Sbjct: 147 AWLREELAKYPRLALLGDFNIAPEDRDVHDPAKWEGQNLVSPQERAAFTALVELGLADAF 206 Query: 239 KEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 ++ + A ++ ID+ ++ D Sbjct: 207 RKFEQPEKAFSWWDYRMFAFRRNAGLRIDHILLSPELASSCSACVI-------DRAPRTW 259 Query: 290 KRLSDHCPISIDYD 303 ++ SDH P+ + Sbjct: 260 EQPSDHTPVVATLN 273 >gi|325915987|ref|ZP_08178280.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937] gi|325537797|gb|EGD09500.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937] Length = 279 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 58/288 (20%), Positives = 95/288 (32%), Gaps = 36/288 (12%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 A A+++ LV+ N++ E S T + + K L D++ LQE+ Sbjct: 18 AAPAPSARELTLVTLNLHHDRED------------WPSRRTYIAKELKQLAPDVIALQEV 65 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 V + TW +I S A+ + + + + L Sbjct: 66 IERRG--SVENQATWLARKLGYEVIFASADPVGAPKRYGNALLSRGKVLARHARLLQPLD 123 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D R A L V+++G+ + V HL E + + ++Q L D+ Sbjct: 124 DY------RVAAHLQVDVDGQPVNVYVTHLN--------ERADARGTATRTRQIGDLLDF 169 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 I P VIAGDFN + L D S+ R S N + Sbjct: 170 IASTSVQ-APVVIAGDFNTAADALDLEALRRGYGDSYGSVHRNSDATVSTLNLHV-FDKP 227 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ QN + Y + G+ SDH + + Sbjct: 228 ARIDHVFFQQNRLLAREARILFDTPY------AEGRWASDHYGVWVRL 269 >gi|255713086|ref|XP_002552825.1| KLTH0D02310p [Lachancea thermotolerans] gi|238934205|emb|CAR22387.1| KLTH0D02310p [Lachancea thermotolerans] Length = 739 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 44/329 (13%), Positives = 93/329 (28%), Gaps = 42/329 (12%) Query: 18 ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 ++ + ++S+N + + + L++ + + DIV LQE+ Sbjct: 402 ETLKKSFTILSYNTLCQHYATPKMYRFTPSWALSWEYRREKLKEQILSYNTDIVCLQEVE 461 Query: 76 S---YNAVAKVFPKNTWC-IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + A + + + IF++ R +DS + +++ + Sbjct: 462 CKTYEDFWAPLLREKGYSGIFHTKTRARTMHSKDSKKVDGCCFFYKDSEFKLMFKEAVDF 521 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK-----SFCFLDSLENTYSPSCSLLSQ 186 + + R L +N + ++ + + + + Sbjct: 522 SSVWMKHKKFQRTEDYLNRAMNKDNVALVVKLQHIKSGEHVWAATTHLHWDPQFNDVKTF 581 Query: 187 QAQWLKDWITQKKES-----------LVPFVIAGDFNRKINYLGNNDD------FWKTID 229 Q L D++ + + VP VI GDFN + N + I+ Sbjct: 582 QVGVLLDYMEKVIKEQNNCNNTQELKKVPVVICGDFNSQTNSAVYELLNTGNVSKHRDIE 641 Query: 230 PNDSLIRFPKEKDSR-------------CNANKNLRNKIPIDYFVM-DQNAYKFLIQESF 275 D K N IDY Q + Sbjct: 642 GRDFGYMSQKNYAHNLPLKSSYDSIGELPFTNLTPTFTDVIDYIWYSSQGLRVRGLLGEI 701 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ K SDH P+ ++F Sbjct: 702 DPEYASKFIGFPNDKFPSDHIPLITRFEF 730 >gi|52307155|gb|AAU37655.1| XthA protein [Mannheimia succiniciproducens MBEL55E] Length = 275 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 34/313 (10%), Positives = 80/313 (25%), Gaps = 77/313 (24%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNA 79 ++++S+NIN L + L + + DI+ LQE + Sbjct: 7 NNMKIISFNINGL----------------RARPHQLDKIVEQYQPDIIGLQEIKVADEMF 50 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 ++ + +++ H +A+ K +D+ R Sbjct: 51 PHELVDHLGYHVYHH------------GQKGHYGVALLCKQAPKAVHKGFSTDTEDAQKR 98 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 + E + V++ F + + L +++ + Sbjct: 99 -----LIMADFETAFGALTVVN-----GYFPQGESRDHETKFPAKEKFYADLLNYVKNEH 148 Query: 200 ESLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFP 238 +I GD N L ++++ + F Sbjct: 149 NPESNIIIMGDMNISPTDLDIGIGEDSRKRWLRTGKCSFLPEEREWYQRLYECGLEDTFR 208 Query: 239 KEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 K + + ID+ + + + + Sbjct: 209 KLNPWTNDKFSWFDYRSKGFAENRGLRIDHILANSKLAERCVDTGI-------ALDIRAM 261 Query: 290 KRLSDHCPISIDY 302 ++ SDH PI + Sbjct: 262 EKPSDHAPIWATF 274 >gi|84625788|ref|YP_453160.1| nuclease [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84369728|dbj|BAE70886.1| nuclease [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 572 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 84/324 (25%), Gaps = 35/324 (10%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60 L L V +R+ S+ + G + ++ + L Sbjct: 256 LTLPAMPTAVAPQVGGDLRIASFKLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 315 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIA 115 L AD+ L E+ + A + I+ + I I Sbjct: 316 IVPLGADVAALMELENDGNAADAAVAQLVAALNAAGKDKDWHFIDSGSGPGADAIRVGIV 375 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE-LLVEINGKKIWVLDIHLKS-FCFLDSL 173 R V + + L G +R + + G V+ H KS C S Sbjct: 376 YRSSQVTPVGKPATLTGGPFDNH---SRVPLAQAFLSTRGATFVVVANHFKSKGCGNASG 432 Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWK 226 + A+ L +W+ V+ GDFN + Sbjct: 433 ADADQQDGQACWNATRTESAKGLHEWLQTDPTGAQTKRAVLVGDFNAYAMEMPMRS---- 488 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + + F + + D+ ++ K L I + D Sbjct: 489 -LRASGWQDAFAVAGVKQPYSFVYDGMSGRQDHALLSPAMAKQLRGAVEWHINADVMDAA 547 Query: 287 SRG-------KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 548 GYAKRNLPGPWRSSDHDPVLLGFS 571 >gi|281178820|dbj|BAI55150.1| exonuclease III [Escherichia coli SE15] gi|330911554|gb|EGH40064.1| exodeoxyribonuclease 3 [Escherichia coli AA86] Length = 268 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 82/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPISVRR-----GFPGDDEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + I V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSPLGNITVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKREN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + + F Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + ++ D ++ S Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|121635466|ref|YP_975711.1| exodeoxyribonuclease III [Neisseria meningitidis FAM18] gi|120867172|emb|CAM10939.1| exodeoxyribonuclease III [Neisseria meningitidis FAM18] gi|325132946|gb|EGC55623.1| exodeoxyribonuclease III [Neisseria meningitidis M6190] gi|325138934|gb|EGC61484.1| exodeoxyribonuclease III [Neisseria meningitidis ES14902] gi|325142997|gb|EGC65353.1| exodeoxyribonuclease III [Neisseria meningitidis 961-5945] gi|325198917|gb|ADY94373.1| exodeoxyribonuclease III [Neisseria meningitidis G2136] Length = 256 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 86/305 (28%), Gaps = 73/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + DI+ LQE Sbjct: 1 MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ +N + R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVH-----IGLPALPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V++++ + LDS + Y Q L +++ + Sbjct: 90 RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMARHG 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D +++ + Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWYEKIHCSTVERQWFQNLLDLGLTDSLRHIHPEGAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ L D +R SDH P++ Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDV-------RVDLDTRALERPSDHAPVT 251 Query: 300 IDYDF 304 ++D+ Sbjct: 252 AEFDW 256 >gi|78212211|ref|YP_380990.1| exodeoxyribonuclease III [Synechococcus sp. CC9605] gi|78196670|gb|ABB34435.1| exodeoxyribonuclease III [Synechococcus sp. CC9605] Length = 288 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 35/315 (11%), Positives = 87/315 (27%), Gaps = 63/315 (20%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++ + V++ +WN+N + + + D++ LQ Sbjct: 1 MLRVFDATESTVQIATWNVN----------------SVRTRLDQVLSWLDREQPDLLCLQ 44 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E +++ + + +A+ + + + Sbjct: 45 ETKVDDSL----------FPVEAFKSAGWHVHIHGQKAYNGVALISREPLEDVRCGFVGE 94 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 D A + ++ + VL++++ + L S + Y LK Sbjct: 95 LPDDAEADDL-GAQKRVISALLSGVRVLNLYVPNGSSLKSEKYPYK------LTWLGCLK 147 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGN------------NDDFWKTIDP--NDSLIRFP 238 ++ +++ P + GDFN + +D + + D L Sbjct: 148 RYLDAQQQRGEPLCMVGDFNIGLEARDLPDPDRQTGGIMASDAERQALRDALGDRLQDVF 207 Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + + ID+ + Sbjct: 208 RVFEPDSGHWSWWDYRSGAWDRDRGWRIDHIYLCDELLGLARSCVIH-------KGMRGN 260 Query: 290 KRLSDHCPISIDYDF 304 ++ SDH P+S+D D+ Sbjct: 261 QQPSDHAPVSVDLDW 275 >gi|117919951|ref|YP_869143.1| exonuclease III [Shewanella sp. ANA-3] gi|117612283|gb|ABK47737.1| Exodeoxyribonuclease III [Shewanella sp. ANA-3] Length = 270 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 85/309 (27%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L S L+ + DI+ LQE + Sbjct: 1 MKIVSFNINGL----------------RSRLHQLQALIDSHQPDIIGLQE---TKVHDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + H +A+ K + Q +D A R Sbjct: 42 FP-------LAEVEAMGYHVHYHGGKAHYGVAMLSKVAPLKVQKGFATDEED----AQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG + VL+ F + + Q L + + Sbjct: 91 MIIGTFAQANGHPLTVLN-----GYFPQGESIDHPTKYPAKRKFYQDLMAHLHANHSNDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 I GD N ++ ++ KT+ + F + Sbjct: 146 DIAIIGDINISPIDLDIGIGEVNRKRWLKTGKCSFQPEEREWLKTLQGWGLVDTFRQLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 RC + ID + + L++ + D + S Sbjct: 206 DRCERYSWFDYRSKGFDDNRGLRIDVILATPSLAARLVES-------DVDYELRGIDKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|325272311|ref|ZP_08138717.1| exonuclease III [Pseudomonas sp. TJI-51] gi|324102557|gb|EGB99997.1| exonuclease III [Pseudomonas sp. TJI-51] Length = 270 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 33/313 (10%), Positives = 80/313 (25%), Gaps = 76/313 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V +NIN L + L + D++ LQE + Sbjct: 1 MKIVCFNINGL----------------RARPHQLAALIEKHQPDVIGLQETKVSDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + H +A+ + + +D+ R Sbjct: 41 ------QFPLADVQALGYHVHYHGQKGHYGVALLSRQAPLSLHKGFAGDEEDA-----QR 89 Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + G I +++ F + + L+ + + + Sbjct: 90 RFIWGTFADAQGNPITIMN-----GYFPQGESRDHPTKFPAKQRFYSDLQVLLESQFRND 144 Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241 P ++ GD N ++L ++ + + + F Sbjct: 145 QPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSFLPEEREWMERLKGWGLVDSFRHLY 204 Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + + D + Sbjct: 205 PDVNDRFSWFDYRSRGFEDEPKRGLRIDLIMASHALVPRIKAAGV-------DYELRGME 257 Query: 291 RLSDHCPISIDYD 303 + SDH PI ++ Sbjct: 258 KPSDHAPIWLELS 270 >gi|73541781|ref|YP_296301.1| endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134] gi|72119194|gb|AAZ61457.1| Endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134] Length = 284 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 84/306 (27%), Gaps = 53/306 (17%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L+SWNI +G + + R+ + + DAD++ LQE+ + P Sbjct: 3 LISWNIQWGRGADG----RVDLSRSVATMRAMA------DADVICLQEVTRGFGELRGAP 52 Query: 86 KNTWCIFYSTERLINH--------SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 S + + + L D Sbjct: 53 GADQVSELSALLPGYRLLFAPGVDRFGSDGGPRQFGNLIATRLPVHEVFRHALPWPADPD 112 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 + R A+E ++ + + V+ HL+ + S + + +L A+ + Sbjct: 113 VASMPRVAIEATLQAGSRPLRVICTHLEYY----SAHQRAAQANALRDWHAEACGHALRP 168 Query: 198 KKESLVP-----------FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + P V+ GDFN K + + D + Sbjct: 169 GRSESTPGPFTPAVRPTEAVLCGDFNSKPDDIAYRRMLEPFDDDTTPWRDAWMHIHPGQS 228 Query: 247 ANK---------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 D+ + +N + + + + + SDH P Sbjct: 229 HAPTCAMYDKEQWPEPPFACDFVFVTENLAERVRRCEVNAATKD-----------SDHQP 277 Query: 298 ISIDYD 303 I + D Sbjct: 278 IVLSLD 283 >gi|330817688|ref|YP_004361393.1| Exodeoxyribonuclease III Xth [Burkholderia gladioli BSR3] gi|327370081|gb|AEA61437.1| Exodeoxyribonuclease III Xth [Burkholderia gladioli BSR3] Length = 258 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 31/303 (10%), Positives = 82/303 (27%), Gaps = 68/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + AD++ LQE+ + Sbjct: 1 MKIATWNVNSLN----------------VRKQHVLDWLATSHADVLCLQELKLTDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ ++ + ++ F R Sbjct: 41 ------KFPKADLEAAGYRSWFTGQKTYNGVAILVRD-TLGVDETDVVKNIPGFEDPQQR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++ + + DS + Y Q L+ W+ + Sbjct: 94 VIAATV-----NGVRIVSAYFPNGQAPDSEKFVYK------LQWLDALRAWLKDELTRHP 142 Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249 + GD+N +D + P + + + Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAALLEMGFVDAFRRFEQPEKTFT 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ L D + ++ SDH P+ Sbjct: 203 WWDYRMMGFRRNAGLRIDHILLSPALAGTLTACEV-------DRVPRTWEQPSDHTPVIA 255 Query: 301 DYD 303 + Sbjct: 256 TIE 258 >gi|323978068|gb|EGB73154.1| exodeoxyribonuclease III [Escherichia coli TW10509] Length = 268 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPDDGEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKREN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + + F Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q ++ D ++ S Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLADCCVETGI-------DYEIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|238754917|ref|ZP_04616267.1| Exodeoxyribonuclease III [Yersinia ruckeri ATCC 29473] gi|238706928|gb|EEP99295.1| Exodeoxyribonuclease III [Yersinia ruckeri ATCC 29473] Length = 268 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 81/310 (26%), Gaps = 73/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + H +A+ K + + +D+ R Sbjct: 42 FP-------LEEVSQHGYHVFYHGQKGHYGVALLTKQKPLAVRRGFPTDEEDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + ++ Q L++++ Q+ Sbjct: 90 RIIMADLATPQGTLTVIN-----GYFPQGESRDHPTKFPAKARFYQDLQNYLAQELTPEA 144 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 +I GD N ++ + + + F Sbjct: 145 QVLIMGDINISPTDRDIGIGEDNRKRWLRTGKCSFLPEEREWLERLQNWGLVDTFRAANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + + I D ++ S Sbjct: 205 DCEDRYSWFDYRSRGFDENRGLRIDVLMASKPLAERCIATGI-------DYDIRSMEKPS 257 Query: 294 DHCPISIDYD 303 DH P+ ++ Sbjct: 258 DHAPVWSEFS 267 >gi|87122253|ref|ZP_01078135.1| exodeoxyribonuclease III [Marinomonas sp. MED121] gi|86162396|gb|EAQ63679.1| exodeoxyribonuclease III [Marinomonas sp. MED121] Length = 274 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 84/312 (26%), Gaps = 76/312 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + + + K DI+ LQE+ ++ Sbjct: 1 MKIVSFNINGL----------------RARPHQIEELVKRQSPDIIGLQEI---KVHDEM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + H +A+ K V + +D+ R Sbjct: 42 FPHDIPQSI-------GYHAYYYGQKSHYGVAIFSKEEAVKVEYGFPNDEEDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + + L +++ Sbjct: 90 RMIIATFNTDKGPLKVIN-----GYFPQGENIEHETKFPAKQKFYADLMNYLANHVA-DE 143 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N +++ ++ + + Sbjct: 144 QVIVMGDINISPTDLDIGIGPQNAKRWLKTGKCSFQPIEREWYAKLEDWGLTDTYRQLNP 203 Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + ID + N L + + ++ Sbjct: 204 GKTDRYSWFDYRSKGFDDEPKRGLRIDVIMASNNLLPLLQDS-------DVNYDIRGMEK 256 Query: 292 LSDHCPISIDYD 303 SDH PI D++ Sbjct: 257 PSDHAPIWSDFE 268 >gi|327541576|gb|EGF28107.1| secreted protein containing Endonuclease/exonuclease/phosphatase domain [Rhodopirellula baltica WH47] Length = 284 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 81/285 (28%), Gaps = 30/285 (10%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + +R+V++NI L S L D DI+ E S Sbjct: 29 SPKPLRVVAYNIYNLKGWPSQSSLAQQAVARGQMAKRLAMELALYDPDIINFSESPSEKL 88 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 ++ NH + S + + + K K+ F+R Sbjct: 89 TKEIAELLGM----------NHVRFPSGGNWPGTLLSKSKISDPQNVPMNGERPKELFTR 138 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R VEL N + + V HL + ++ + + + + Sbjct: 139 HWGRALVEL---PNDEPLIVHSAHLYPTPEPT-----------IRLKEIRAMIESMKSDL 184 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 +S ++ GD N + + F K + K + IDY Sbjct: 185 DSGRSMLLIGDLNHSPDTDEYKLWI-----DAGWIDTFAKVGEGNGFTIKADNPEWRIDY 239 Query: 260 FVMDQNAYKFL-IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K + E + ++ + LSDH P +D Sbjct: 240 VFATGPIAKRVSESRPLFEGAFRVNNEDEKSYALSDHLPQFAVFD 284 >gi|161486214|ref|NP_754044.2| exonuclease III [Escherichia coli CFT073] Length = 268 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 83/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + S +Q Q L++++ + + Sbjct: 90 RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFSAKAQFYQNLQNYLETELKREN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + + F Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + ++ D ++ S Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|91774528|ref|YP_544284.1| exodeoxyribonuclease III [Methylobacillus flagellatus KT] gi|91708515|gb|ABE48443.1| Exodeoxyribonuclease III [Methylobacillus flagellatus KT] Length = 255 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 33/302 (10%), Positives = 86/302 (28%), Gaps = 72/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N+L+ + + D++ LQE ++ Sbjct: 1 MKLATWNVNSLN----------------VRLPQVLDWIAVEKPDVLCLQETKQEDS---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ S + +A+ + + Sbjct: 41 ------KFPFDALKEAGYNAVHSGQKTYNGVAILSPHEIEDV------TYGIPGLNDEQK 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R V + I ++ ++ + LDS + Y + L ++ + + Sbjct: 89 RLVAATIN----DIRIVCAYIPNGQSLDSDKYQYK------LGWLEALTAYLKTELAAHP 138 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANK 249 + GD+N +D + + L + D ++ Sbjct: 139 KLALLGDYNIAPEDRDVHDPVAWAGQVLVSEPERAAFRAIMALGLHDGFRLFDQEPDSFS 198 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ + ++ D + +R SDH P+ + Sbjct: 199 WWDYRMAGFRRNLGLRIDHILVSEALKSECMRCWI-------DKGPRKLERPSDHTPVVL 251 Query: 301 DY 302 Sbjct: 252 QL 253 >gi|254447579|ref|ZP_05061045.1| exodeoxyribonuclease III [gamma proteobacterium HTCC5015] gi|198262922|gb|EDY87201.1| exodeoxyribonuclease III [gamma proteobacterium HTCC5015] Length = 261 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 88/305 (28%), Gaps = 71/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N+L + + + + D++ LQE Sbjct: 1 MKIASWNVNSL----------------KVRLPYVLDWLEQTNTDVLCLQE---TKLTDDK 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + S + +A+ K S + R Sbjct: 42 FPDL-------AIEEAGYEVAFSGQKTYNGVAILLKK---NAASLRDVVTDVPGLVDPQR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V+D+++ + + S + Y + + D+I Q+ + Sbjct: 92 RIMAATI----GDVRVIDLYVVNGKEVGSDKYDYK------LHWLKKVGDYIEQQSQQYE 141 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GDFN D K I N F + + Sbjct: 142 KLIVLGDFNIAPEDEDVYDPIAWSEKILCSTPERDALKRIKDNGLKDCF-RMLNQDSGEY 200 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID + + K L D G++ SDH P+ Sbjct: 201 SWWDFRTKGFENGRGLRIDLILASEALQKVLKGCWI-------DRQPRAGEKPSDHAPVV 253 Query: 300 IDYDF 304 ++ + Sbjct: 254 AEFTY 258 >gi|319761678|ref|YP_004125615.1| endonuclease/exonuclease/phosphatase [Alicycliphilus denitrificans BC] gi|330823549|ref|YP_004386852.1| endonuclease/exonuclease/phosphatase [Alicycliphilus denitrificans K601] gi|317116239|gb|ADU98727.1| Endonuclease/exonuclease/phosphatase [Alicycliphilus denitrificans BC] gi|329308921|gb|AEB83336.1| Endonuclease/exonuclease/phosphatase [Alicycliphilus denitrificans K601] Length = 253 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 47/292 (16%), Positives = 87/292 (29%), Gaps = 53/292 (18%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 A + +R+ ++NI+ + + L + LDADIV LQE+ Sbjct: 7 PAEHSGILRVATYNIH--------KGVQGLGPARRLEIHNLGLAVEQLDADIVCLQEVRK 58 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSN------NDIHTAIAVRKKNVRVLQQSYPL 130 N + W E L A+ + V Q Sbjct: 59 MN-HKEAAYFKRWPRVPQAEYLAPEGYAAVYRTNAYTRHGEHGNALLTRWPVVGHQH--- 114 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 S R R + + VE+ G+ + + +HL +Q + Sbjct: 115 --EDISDHRFEQRGLLHVEVEVQGRCVHAIVVHLGLIPGS-------------RVRQVER 159 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 L+ +I ++ + P V+AGDFN D + + + + Sbjct: 160 LQRFIAREVPAGAPLVVAGDFN---------DWGLQIKHMLAGFGLYEYDDAPQAFTYPA 210 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D+ + L R+SDH P+ ++ Sbjct: 211 RLPLVQLDHVYVRG-----LTPLGLQVPRGRI------WWRMSDHLPLIAEF 251 >gi|254718977|ref|ZP_05180788.1| exodeoxyribonuclease III Xth [Brucella sp. 83/13] gi|265983967|ref|ZP_06096702.1| exodeoxyribonuclease III Xth [Brucella sp. 83/13] gi|264662559|gb|EEZ32820.1| exodeoxyribonuclease III Xth [Brucella sp. 83/13] Length = 260 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 87/302 (28%), Gaps = 67/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + L+ + + DIV LQE+ S + Sbjct: 1 MKIATWNING----------------VKARIDNLQHWLRESSPDIVCLQEIKSVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ K D +R Sbjct: 41 ------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLPGDDSDEQARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + + + V+ ++L + +D+ + Y S Q L++W ++ Sbjct: 92 --IEGVYSTDNGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQRLENWAKERLTLEE 143 Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIRFPKEKDSRCNANK 249 P V+AGD+N + + N + Sbjct: 144 PLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRASTDESGVYS 203 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A I + + + ++ SDH P+++ Sbjct: 204 FWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------RAWEKPSDHVPVTV 256 Query: 301 DY 302 Sbjct: 257 TL 258 >gi|191171643|ref|ZP_03033190.1| exodeoxyribonuclease III [Escherichia coli F11] gi|190907973|gb|EDV67565.1| exodeoxyribonuclease III [Escherichia coli F11] Length = 268 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 82/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE ++ + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQETKVHDVM--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ H +A+ K + + R Sbjct: 42 -------FPLEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKREN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + + F Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + ++ D ++ S Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|254252251|ref|ZP_04945569.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158] gi|124894860|gb|EAY68740.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158] Length = 290 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 86/312 (27%), Gaps = 50/312 (16%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---- 74 + +RL+ WNI + +G+ + RT +D L + D++ LQE+ Sbjct: 2 TGGPTMRLIDWNIQWGRDADGIVD----LSRTVADARRLGDF------DVLCLQEVTRGF 51 Query: 75 ------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + A++ A+ + Sbjct: 52 GSLPGGPGADQFAELAALLPGYTIIDAIGADLPGAEPGAPRRQFGNAIATRLPVARVLRQ 111 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 L D+ + + R A+++ + + V+ HL+ + + ++A Sbjct: 112 LLPWPADADTPSMPRVALDVELHTASGPLRVVTTHLEFYSARQ--RIAQVDTLRERHREA 169 Query: 189 QWLKDWITQKKESLVPFV---------IAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-- 237 + + PF+ + GDFN D + + Sbjct: 170 CAHAARPAPAENADGPFIATGQPRDAIVCGDFNSAFGSDAYRRFLEPIADAPRFVDAWVA 229 Query: 238 ------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 P + + + D+ + + + R Sbjct: 230 CHAGHTPPPTAGVYDTAQWSDGPLACDFVFVTDTLLSRVKRCEI-----------DGDVR 278 Query: 292 LSDHCPISIDYD 303 SDH PI ++ D Sbjct: 279 ASDHQPIVLELD 290 >gi|301113944|ref|XP_002998742.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262112043|gb|EEY70095.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 525 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 43/320 (13%), Positives = 92/320 (28%), Gaps = 49/320 (15%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 C+A+ + R++S+N+ + V + L ++ K ADI+ QE+ Sbjct: 221 CSAAPSGP-RILSYNVWNTNPSSDVYGAGRRWDQYAKRLDHLVEFVKEAQADIIGFQEVR 279 Query: 76 ---------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 ++ V + + + + + R + I ++ + V Sbjct: 280 YDGVFGDPANHAQVKHLADRLPGYQYVYQAAMSYINSRMPHERIEEGPSILSRYPVVATD 339 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 L + + + R + +V+ +I V HL S S S Sbjct: 340 YLLLSRDPNDPNDSHQRLCLHAVVDYPRWGEIDVYVTHL---------------SLSERS 384 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN---------------DDFWKTIDP 230 ++ ++ W ++ V+ GD N + LG D W + Sbjct: 385 REQTKVEIWEYMRQGKGKTQVLLGDLNSEPQSLGIRFLSGQAELLGQTTDMKDAWLEVHK 444 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR-- 288 + + ID+ + + E + D Sbjct: 445 EAKPRSTDPDDRQHKFTFPSDNPSKRIDFVLYRGEGRVKECEIIGQEPTKDTKDFPDDVG 504 Query: 289 ------GKRLSDHCPISIDY 302 SDH + ++ Sbjct: 505 MLHASSPVYASDHRGVIAEF 524 >gi|254487256|ref|ZP_05100461.1| exodeoxyribonuclease III [Roseobacter sp. GAI101] gi|214044125|gb|EEB84763.1| exodeoxyribonuclease III [Roseobacter sp. GAI101] Length = 260 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 81/306 (26%), Gaps = 71/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +++ ++NIN + L Q+ D+ LQE+ Sbjct: 1 MKIATFNING----------------IKARIDALPQWLDEAQPDVAILQEIKTVDDAFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++F + + +A+ K D +R Sbjct: 45 ELFEDRGYNV------------ETHGQKSFNGVAILSKRPLEDVTRGLPGDDGDEQARY- 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E V + I + ++L + + Y + L+D Sbjct: 92 ----IEATVMGDKSAIRLCGLYLPNGNPAPGPKFDYK------LEWMARLEDRARALLAE 141 Query: 202 LVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 PF++ GD+N + W+ + F + Sbjct: 142 ETPFLMTGDYNVIPQAEDAATPDAWRDDALFRPETRAAWRKLVALGLTEAFRARTQGPGH 201 Query: 247 ANKNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + N I ID+F++ L D + SDH P+ Sbjct: 202 YSFWDYQAGAWNRNNGIRIDHFLLSPVVADMLRDCQI-------DKEIRGRDKPSDHVPV 254 Query: 299 SIDYDF 304 +D DF Sbjct: 255 WVDLDF 260 >gi|294788414|ref|ZP_06753657.1| exodeoxyribonuclease III [Simonsiella muelleri ATCC 29453] gi|294483845|gb|EFG31529.1| exodeoxyribonuclease III [Simonsiella muelleri ATCC 29453] Length = 256 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 87/302 (28%), Gaps = 71/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + ++ N D++ LQE+ Sbjct: 1 MKIATWNVNSLN----------------VRQPQVMEWLMNEQPDVLALQELKLEQD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + S + +A+ ++ Q+ R Sbjct: 41 ------KFPLAALQMMGWNAVWSGQKTYNGVALISRHELTDVQT-----GLPQMPNDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V++++ + LDS + Y L ++ + Sbjct: 90 RVIVATVN----GVRVINVYCVNGEALDSPKFAYKRE------WFAALTHFVRDELARYA 139 Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249 V+ GDFN D W + L + + Sbjct: 140 DLVLLGDFNIAPTDEDVYDPKKWHEQIHCSSEERSWFKNLLDLGLTDGLRHANPIGKFYT 199 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ N L Q D +R SDH P+ Sbjct: 200 WWDYRGAMFEKGLGLRIDHILVSDNLIDKLQQV-------VVDTHTRANERPSDHAPVHA 252 Query: 301 DY 302 D+ Sbjct: 253 DF 254 >gi|291514627|emb|CBK63837.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301] gi|313156836|gb|EFR56276.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 278 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 90/312 (28%), Gaps = 44/312 (14%) Query: 1 MIRKYVLALVFFLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 M + + L+ F + Q ++L+S+N+ T ++G + W N Sbjct: 1 MKKTMLFLLLAFCFSNSVQAGQDAVSIKLISFNMRTSWGRDGDNSWPN-------RRHAT 53 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 Q + D++ +QE + + +R Sbjct: 54 AQMLRQEAPDVMGVQEAMQDQLYYIDTECPRYARVGED-----RDGGAEGGETMAVFYLR 108 Query: 118 KKNVRVLQQSYPLLGAKD----SFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLD 171 + + ++ + D + A NR + + +GK+ + + HL + Sbjct: 109 DRFELLDSGTFWISETPDNVSRGWDAACNRTVTWVELRDKSSGKEFFYFNTHLDHQGKI- 167 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 + + + I Q ++ GD N I+ + + Sbjct: 168 -----------AREEGVKLIVTKIRQIAGKKAAVILGGDLNTSIDNPHLKP--LTRLMAS 214 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 ++ N + + I +D+ + D Sbjct: 215 ARDTAAETDQKGTFNGFGSAPDTIILDHLFYRGRMKCR---------KFVTLDGDYGAPY 265 Query: 292 LSDHCPISIDYD 303 +SDH PI++ + Sbjct: 266 ISDHYPIAMVFT 277 >gi|290475444|ref|YP_003468332.1| exonuclease III [Xenorhabdus bovienii SS-2004] gi|289174765|emb|CBJ81566.1| exonuclease III [Xenorhabdus bovienii SS-2004] Length = 268 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 35/310 (11%), Positives = 80/310 (25%), Gaps = 75/310 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE ++ Sbjct: 1 MKFVSFNINGL----------------RARPHQLAAIVEQHQPDVIGLQE---TKVHDEM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + H +A+ + V + D+ R Sbjct: 42 FP-------LEEVSKLGYHIFYHGQKSHYGVALLTRQQPVTVRKGFPTDDDDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + +E + +++ F + + Q L ++ + + Sbjct: 90 RIIMADIETPQGLMTIIN-----GYFPQGESREHPVKFPAKEKFYQDLNRYLEKNQSPDS 144 Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 +I GD N + + + + F + Sbjct: 145 HILIMGDMNISPTDLDIGIGENNQKRWLKTGKCSFLPEEREWMGR-LKDWGLIDTFRAQH 203 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID + + + + D ++ Sbjct: 204 PEASDQFSWFDYRSKGFDDNRGLRIDLLLASRPLAERCLSSGI-------DYAIRSMEKP 256 Query: 293 SDHCPISIDY 302 SDH P+ ++ Sbjct: 257 SDHAPVWAEF 266 >gi|307544063|ref|YP_003896542.1| hypothetical protein HELO_1474 [Halomonas elongata DSM 2581] gi|307216087|emb|CBV41357.1| K07004 [Halomonas elongata DSM 2581] Length = 1608 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 39/331 (11%), Positives = 87/331 (26%), Gaps = 64/331 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWK--------------NSVKRTTSDYTLLRQYAKNLDADI 68 +++ S+N+ + NS T + DADI Sbjct: 1280 SLKVASFNVLNYFTTLDENGNSVVTPAGTEHDPRGANSSLELTRQQDKIVSAINGSDADI 1339 Query: 69 VFLQEMGSYNAVAKVF-----------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 V L E+ + + + + ++ ++ I + + Sbjct: 1340 VGLMEIENNGYGDDSAIAHLVEALNADDADAGWAYVTPTDAEGNTVAPGSDAIAVGMIYK 1399 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLEN 175 +V + R + + +G+ V H KS + + + Sbjct: 1400 STSVTPEGHAAVDASGVFETGN---RPPMLQTFREDASGETFSVAVNHFKSKGSVINGQE 1456 Query: 176 T----YSPSCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTID 229 + + + A+ L DW+ ++ GDFN N ++ Sbjct: 1457 AIGDGQGNNNPIRVEAAKQLADWVASDPTDSGDSDTLLIGDFNSYANEDPI-----TALE 1511 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + + +D+ + ++ + + I +E Sbjct: 1512 DDGYTLLDDD------YSYSYDGQWGSLDHALASESMNAQVTGTTTWHINADEPTSFDYN 1565 Query: 290 -----------------KRLSDHCPISIDYD 303 R SDH PI + D Sbjct: 1566 TEYKSDDQVDAYYDDGPYRASDHDPIVVGVD 1596 >gi|240949558|ref|ZP_04753897.1| exonuclease III [Actinobacillus minor NM305] gi|257465617|ref|ZP_05629988.1| exonuclease III [Actinobacillus minor 202] gi|240295999|gb|EER46665.1| exonuclease III [Actinobacillus minor NM305] gi|257451277|gb|EEV25320.1| exonuclease III [Actinobacillus minor 202] Length = 267 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 86/311 (27%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + D++ LQE + + Sbjct: 1 MKFISFNINGL----------------RARPHQLEAIIEKHQPDVIGLQEIKVADEDFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +F+ H +A+ K + + A+D+ R Sbjct: 45 DLVNHLGYHVFHH------------GQKGHYGVALLTKKAPLAVRKGFPTDAEDAQKR-- 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +E + VL+ F ++ ++ L+ ++ + + Sbjct: 91 ---MIMADIETEFGTLTVLN-----GYFPQGENRSHETKFPAKAKFYADLQHYLENQLKP 142 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 P +I GD N L ++ + + F Sbjct: 143 ENPIIIMGDMNISPTDLDIGIGEANRKRWLRDGKCSFLPEEREWLDRLYGYGLVDTFRAM 202 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + ++ + ++ D ++ Sbjct: 203 NPLAADKFSWFDYRSKGFDDNRGLRIDLVLASKSLAERCVETGI-------DLEIRAMEK 255 Query: 292 LSDHCPISIDY 302 SDH P+ + Sbjct: 256 PSDHSPVWAVF 266 >gi|238063778|ref|ZP_04608487.1| exodeoxyribonuclease III Xth [Micromonospora sp. ATCC 39149] gi|237885589|gb|EEP74417.1| exodeoxyribonuclease III Xth [Micromonospora sp. ATCC 39149] Length = 271 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 77/306 (25%), Gaps = 71/306 (23%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 A+ +RL +WN+N + L + D+V LQE + Sbjct: 3 QARGMRLATWNVN----------------SVKARLPRLLDWLATTGPDVVCLQETKCPDG 46 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + ++ ++ +A+ + + F Sbjct: 47 A----------FPVAEVGELGYTVASHSDGRWNGVAILSRAGLADVTVG--FPGEPGFPE 94 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + + V +++ + Y + L+D + Q+ Sbjct: 95 PEARA-----ISATCAGLRVWSVYVPNGRAPGDPHYAYKLA------WFAALRDALEQEL 143 Query: 200 ESLVPFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSR 244 +P + GDFN D + + P Sbjct: 144 TGGLPLAVCGDFNVAPTDADVWDPALFATSTHVTPAERDALAALRDLELSDVVPTPMKGP 203 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + + ID + + D +GK SDH Sbjct: 204 -HPYTYWDYRAGMFHQNKGMRIDLVYASAPFARAVRAAYV-------DREARKGKAPSDH 255 Query: 296 CPISID 301 P+ +D Sbjct: 256 APVVVD 261 >gi|307311330|ref|ZP_07590973.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti BL225C] gi|307318863|ref|ZP_07598295.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti AK83] gi|306895584|gb|EFN26338.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti AK83] gi|306899631|gb|EFN30259.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti BL225C] Length = 368 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 59/366 (16%), Positives = 117/366 (31%), Gaps = 85/366 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVK----------RTTSDYTLLRQY------------ 60 +RL ++NI L + S ++N +K R+ ++Y L + Sbjct: 2 SLRLATFNIENLMSRFDFSGFRNQLKQDRVLRLFDVRSEAEYQRLEEARTIAHTDDTRQM 61 Query: 61 ----AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + DADI+ LQE + A+ + + + R + + + I A+ + Sbjct: 62 SALAIADCDADILCLQEADNMAALQAFEYGYLFRMAGNGYRQKYLVEGNDSRGIDVAVLM 121 Query: 117 RK------KNVRVLQQSYPLLGAKDSF-------------SRAGNRRAVELLVEINGKKI 157 R+ K + +S+ L +D R R +E+ V I G+ + Sbjct: 122 REETRDGQKIECLEVKSHAALTYEDLDLFNDELALTNRPRDRIFKRDCLEVDVRIGGRPL 181 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV----PFVIAGDFNR 213 + +HLKS + + ++ + + ++ I ++ F I GD N Sbjct: 182 TLYVVHLKSMGPAREGLDGRQATMAVRIAEVKAVRHIIERRFGRGHTADKVFAICGDMND 241 Query: 214 ---KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------------- 254 K+ LG+ + ++ + ++ N NLR Sbjct: 242 YQEKVKVLGDRRNGYEFLPHEETTSALDVLSHDGFVENPNLRRPVLDRWTLFHSRGPEDR 301 Query: 255 --IPIDYFVMDQNAYKFLIQESFSEILY---------------NEDDIKSRGKRLSDHCP 297 +DY + + I + SDHCP Sbjct: 302 HLCQLDYIWLSPELARRNAARLPEIIRAGQPYRTIFPAGQEVERYPRTGWDRPKASDHCP 361 Query: 298 ISIDYD 303 + + D Sbjct: 362 VVMTLD 367 >gi|325280301|ref|YP_004252843.1| Endonuclease/exonuclease/phosphatase [Odoribacter splanchnicus DSM 20712] gi|324312110|gb|ADY32663.1| Endonuclease/exonuclease/phosphatase [Odoribacter splanchnicus DSM 20712] Length = 351 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 50/342 (14%), Positives = 90/342 (26%), Gaps = 50/342 (14%) Query: 2 IRKYVLALVFFLVPCTASVAQKV-RLVSWNINTLSEQ-------EGVSLWKNSVKRTTSD 53 K + L V VAQ R++ +N+ L + + + T + Sbjct: 17 KMKLLGILFLLCVLTMPVVAQDHCRIMFYNVENLFDTADDPSTADDEFTPRGKKHWTKAK 76 Query: 54 YT----LLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105 YT + + ++ IV L E+ + + + I H Sbjct: 77 YTDKLLKIAEVIDSVGDKELPCIVGLAEVENRWVLEDL---TQKTALADGNYGIVHQDSP 133 Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 I A+ RK +L+ + L + R + ++ + H Sbjct: 134 DRRGIDVALLYRKDCFELLETDFLRLSFP-EDTTIRTRDILYASGVLDSDTLHFFVCHFP 192 Query: 166 SFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 S + + S + + L +S VI GD N K N Sbjct: 193 SMIGGEKQSEWRRERAASTVRHKVDSLLA-----VQSRAGIVIMGDLNGKANTPAQKVLG 247 Query: 225 WKTIDP----NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK----FLIQESFS 276 K+ D D + + N ID+ ++ + + Sbjct: 248 TKSSDKKPRCKDLYNTGYYLLKKNYGSYRYKGNWQTIDHLILSGALLDGHSVWKADRRLT 307 Query: 277 EILYN----------------EDDIKSRGKRLSDHCPISIDY 302 + SDH PI ID Sbjct: 308 VFSASFLLEEDKTYFGYKPCPTYRGPRYVGGYSDHLPIYIDL 349 >gi|121611360|ref|YP_999167.1| exodeoxyribonuclease III Xth [Verminephrobacter eiseniae EF01-2] gi|121556000|gb|ABM60149.1| exodeoxyribonuclease III Xth [Verminephrobacter eiseniae EF01-2] Length = 258 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 33/301 (10%), Positives = 84/301 (27%), Gaps = 68/301 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+LS + + D + LQE+ + Sbjct: 1 MKIATWNVNSLS----------------VRLPQVLAWLAANPVDALCLQELKLSDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + + + +A+ ++ + D +R Sbjct: 41 ------KFPHAALQAAGYDAVALGQKTYNGVAILSRHRLNAVVRN-IPDFGDEQAR---- 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ + +L+ + + S + Y + Q L+D + + + Sbjct: 90 -VIAATLDSPLGPLRLLNGYFVNGQEPGSEKFAYK------LRWLQALQDMVRAELAAHP 142 Query: 204 PFVIAGDFNRKINYLGNNDD--------------FWKTIDPNDSLIRFPKEKDSRCNANK 249 V+AGDFN + D L + + + Sbjct: 143 RLVLAGDFNVAPQDRDSYDPEGLRETIHHTSAERAHFQALLALGLADAFRMFEQPGKSYS 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ + D + + SDH P+ + Sbjct: 203 WWDYRMLGFQKNRGLRIDHILVSAALRPAVSACMI-------DRAPRKNPQPSDHAPVVL 255 Query: 301 D 301 Sbjct: 256 T 256 >gi|83645532|ref|YP_433967.1| exonuclease III [Hahella chejuensis KCTC 2396] gi|83633575|gb|ABC29542.1| exodeoxyribonuclease III [Hahella chejuensis KCTC 2396] Length = 270 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 82/312 (26%), Gaps = 76/312 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+VS+N+N S L++ DI+ LQE + ++ Sbjct: 1 MRIVSFNVNG----------------VRSRLHQLKELISQYQPDIIGLQE---TKVIDEL 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + H +A+ K + +++ R Sbjct: 42 FP-------LEAINEMGYQAEYYGQKGHYGVALLSKQPALRCFKGFEGDGEEAHKRW--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + G+ + V + F ++ + D++ Q+ Sbjct: 92 --IVGEYAVGGQTLVVCN-----GYFPQGENRSHPDKFPNKQRFYAGTLDFLQQR-SPDQ 143 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 P V+ GD N ++ + + F + Sbjct: 144 PIVVMGDMNVSHTDSDIGIGEENRKRWLRTGKCSFLPEEREWLNRLLDWGLVDTFRQHFP 203 Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + Q + ++ Sbjct: 204 DVKDRYSWFDYRSRGFEDNPKRGLRIDLILATQPLAARCVDAGV-------SYEIRSMEK 256 Query: 292 LSDHCPISIDYD 303 SDHCPI D+D Sbjct: 257 ASDHCPIWADFD 268 >gi|71279793|ref|YP_269869.1| exonuclease III [Colwellia psychrerythraea 34H] gi|71145533|gb|AAZ26006.1| exodeoxyribonuclease III [Colwellia psychrerythraea 34H] Length = 268 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 81/310 (26%), Gaps = 72/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ DI+ LQE+ ++ Sbjct: 1 MKIISFNINGL----------------RARLHQLQAIIDKHQPDIIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K Q G A R Sbjct: 42 -------FPLEAVEAMGYHVYFHGQKAHYGVAMLCKKEAESVQR----GFPTDDDEAQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + G+K+ VL+ F ++ + + L ++ + Sbjct: 91 MIMVTTTNDKGEKVTVLN-----GYFPQGENISHETKYPYKRKFYKDLMTYLNDNHVNDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 V+ GD N ++ ++ + + F + Sbjct: 146 NVVVMGDINISPQDLDIGIGDVNSKRWLKSGKCSFQPEEREWLTRLMDWGFVDTFRQLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + ID + +N + I + D ++ S Sbjct: 206 DTTERYSWFDYRSRGFDDNRGLRIDVVLATKNMAEQC-------IEADIDYELRAIEKPS 258 Query: 294 DHCPISIDYD 303 DH PI + Sbjct: 259 DHAPIWSTFS 268 >gi|15802160|ref|NP_288182.1| exonuclease III [Escherichia coli O157:H7 EDL933] gi|15831709|ref|NP_310482.1| exonuclease III [Escherichia coli O157:H7 str. Sakai] gi|168749430|ref|ZP_02774452.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4113] gi|168756758|ref|ZP_02781765.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4401] gi|168762180|ref|ZP_02787187.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4501] gi|168770517|ref|ZP_02795524.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4486] gi|168774945|ref|ZP_02799952.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4196] gi|168782171|ref|ZP_02807178.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4076] gi|168788152|ref|ZP_02813159.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC869] gi|168800064|ref|ZP_02825071.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC508] gi|195937435|ref|ZP_03082817.1| exonuclease III [Escherichia coli O157:H7 str. EC4024] gi|208810770|ref|ZP_03252646.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4206] gi|208816750|ref|ZP_03257870.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4045] gi|208821646|ref|ZP_03261966.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4042] gi|209395934|ref|YP_002270819.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4115] gi|217328604|ref|ZP_03444685.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. TW14588] gi|254793367|ref|YP_003078204.1| exonuclease III [Escherichia coli O157:H7 str. TW14359] gi|261227757|ref|ZP_05942038.1| exonuclease III [Escherichia coli O157:H7 str. FRIK2000] gi|261258078|ref|ZP_05950611.1| exonuclease III [Escherichia coli O157:H7 str. FRIK966] gi|291282928|ref|YP_003499746.1| Exodeoxyribonuclease III [Escherichia coli O55:H7 str. CB9615] gi|12515771|gb|AAG56735.1|AE005398_1 exonuclease III [Escherichia coli O157:H7 str. EDL933] gi|13361922|dbj|BAB35878.1| exonuclease III [Escherichia coli O157:H7 str. Sakai] gi|187769420|gb|EDU33264.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4196] gi|188016211|gb|EDU54333.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4113] gi|189000291|gb|EDU69277.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4076] gi|189356216|gb|EDU74635.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4401] gi|189360591|gb|EDU79010.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4486] gi|189367497|gb|EDU85913.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4501] gi|189372068|gb|EDU90484.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC869] gi|189377552|gb|EDU95968.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC508] gi|208725286|gb|EDZ74993.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4206] gi|208731093|gb|EDZ79782.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4045] gi|208741769|gb|EDZ89451.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4042] gi|209157334|gb|ACI34767.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4115] gi|209768548|gb|ACI82586.1| exonuclease III [Escherichia coli] gi|209768550|gb|ACI82587.1| exonuclease III [Escherichia coli] gi|209768552|gb|ACI82588.1| exonuclease III [Escherichia coli] gi|209768554|gb|ACI82589.1| exonuclease III [Escherichia coli] gi|209768556|gb|ACI82590.1| exonuclease III [Escherichia coli] gi|217317951|gb|EEC26378.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. TW14588] gi|254592767|gb|ACT72128.1| exonuclease III [Escherichia coli O157:H7 str. TW14359] gi|290762801|gb|ADD56762.1| Exodeoxyribonuclease III [Escherichia coli O55:H7 str. CB9615] gi|320188437|gb|EFW63099.1| Exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC1212] gi|320641598|gb|EFX10986.1| exonuclease III [Escherichia coli O157:H7 str. G5101] gi|320646958|gb|EFX15791.1| exonuclease III [Escherichia coli O157:H- str. 493-89] gi|320652240|gb|EFX20538.1| exonuclease III [Escherichia coli O157:H- str. H 2687] gi|320657841|gb|EFX25603.1| exonuclease III [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658415|gb|EFX26109.1| exonuclease III [Escherichia coli O55:H7 str. USDA 5905] gi|320668313|gb|EFX35140.1| exonuclease III [Escherichia coli O157:H7 str. LSU-61] gi|326342117|gb|EGD65898.1| Exodeoxyribonuclease III [Escherichia coli O157:H7 str. 1044] gi|326343669|gb|EGD67431.1| Exodeoxyribonuclease III [Escherichia coli O157:H7 str. 1125] Length = 268 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 82/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDEEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKREN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + + F Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + ++ D ++ S Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|260170322|ref|ZP_05756734.1| hypothetical protein BacD2_00508 [Bacteroides sp. D2] gi|315918686|ref|ZP_07914926.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313692561|gb|EFS29396.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 292 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 45/319 (14%), Positives = 85/319 (26%), Gaps = 56/319 (17%) Query: 2 IRKYVLALVFFLVPCTASVA---------QKVRLVSWNINTLSEQEGVSLWKNSVKRTTS 52 + Y L L+ + + +RL S+NI T ++ + Sbjct: 7 KKYYFLFLILLFAGELPAKSLNLDKTKPEDIIRLASYNIRTKGDKGDKA--------WEV 58 Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 L + D+ +QE + + + I + N H Sbjct: 59 RLNALVDVVRRNKFDMFAIQEGRTSQLKDMM--------ILNEFSYIGRDRDGDNKGEHC 110 Query: 113 AIAVRKKNVRVLQQSYPLLG-----AKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLK 165 AI +K +VL+ + R + GKK +V + H Sbjct: 111 AIFYKKDRFKVLKHGDFWYSETPDIPSYGWGARCRRICTWGYFKDLRTGKKFYVFNSHT- 169 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 S +L +Q + + P GDFN + Sbjct: 170 ----DHEATEARRQSSFMLLEQVRKIAK--------GKPTFCTGDFNATPDEEPIQLLLK 217 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNE 282 ++ + K + + + ID+ + + Sbjct: 218 DSLLLDSYECTLTPPKGPSGSFYAYDKTRNIAKRIDFIFVTPKIKVLS--------YHTI 269 Query: 283 DDIKSRGKRLSDHCPISID 301 DD K SDH P+ ++ Sbjct: 270 DDDIKYNKYSSDHFPVMVE 288 >gi|284921668|emb|CBG34740.1| exodeoxyribonuclease III [Escherichia coli 042] Length = 268 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 83/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKREN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + + F + Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRQANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + ++ D ++ S Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|254472835|ref|ZP_05086234.1| endonuclease/exonuclease/phosphatase [Pseudovibrio sp. JE062] gi|211958299|gb|EEA93500.1| endonuclease/exonuclease/phosphatase [Pseudovibrio sp. JE062] Length = 289 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 88/310 (28%), Gaps = 55/310 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-------- 75 +++VS+NI + +G D + ADI+ LQE+ Sbjct: 1 MKIVSYNIQYGTGIDG-----------KVDLARIAGEL--EGADIIGLQEVDRFWKRNGN 47 Query: 76 --SYNAVAKVFPKNTWCIFYS---TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 +A + W + + + N + K + ++YPL Sbjct: 48 VDQAAELADLLGGYRWVYGPGLDMDASFHDENGKLVNRRRQHGEMILSKYPIISTRTYPL 107 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY--SPSCSLLSQQA 188 A +E +++ G + V + HL + +L + Sbjct: 108 PKMGSITRHAIQAALLEAVIDAPGGPLRVYNTHLFYWSPDFALVQAQFVRDRIKTAPSEG 167 Query: 189 QWL-------KDWITQKKESLVP--FVIAGDFNRKINYL-------GNNDDFWKTIDPND 232 W+ + + +P ++ GD N +++ + + Sbjct: 168 GAWCGGPGIDAHWLNDEPQPTMPTDCILLGDMNNGPGTPVYEVFTGPPSEEGGRVQTLDG 227 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + + + + ID+ + + + + Sbjct: 228 FVDPWVWLGNEEMSGKTAHFDTRRIDHVFVGASLRHRIAGMWV-----------DEDAKG 276 Query: 293 SDHCPISIDY 302 SDH P+ ++ Sbjct: 277 SDHLPVWLEL 286 >gi|162138430|ref|YP_540952.2| exonuclease III [Escherichia coli UTI89] gi|170683141|ref|YP_001743499.1| exonuclease III [Escherichia coli SMS-3-5] gi|215486966|ref|YP_002329397.1| exonuclease III [Escherichia coli O127:H6 str. E2348/69] gi|218558617|ref|YP_002391530.1| exonuclease III [Escherichia coli S88] gi|218689690|ref|YP_002397902.1| exonuclease III [Escherichia coli ED1a] gi|293410066|ref|ZP_06653642.1| exodeoxyribonuclease III [Escherichia coli B354] gi|306814999|ref|ZP_07449155.1| exonuclease III [Escherichia coli NC101] gi|312966949|ref|ZP_07781167.1| exodeoxyribonuclease III [Escherichia coli 2362-75] gi|331663230|ref|ZP_08364140.1| exodeoxyribonuclease III [Escherichia coli TA143] gi|170520859|gb|ACB19037.1| exodeoxyribonuclease III [Escherichia coli SMS-3-5] gi|215265038|emb|CAS09425.1| exonuclease III [Escherichia coli O127:H6 str. E2348/69] gi|218365386|emb|CAR03109.1| exonuclease III [Escherichia coli S88] gi|218427254|emb|CAR08144.2| exonuclease III [Escherichia coli ED1a] gi|222033502|emb|CAP76243.1| exodeoxyribonuclease III [Escherichia coli LF82] gi|291470534|gb|EFF13018.1| exodeoxyribonuclease III [Escherichia coli B354] gi|294494019|gb|ADE92775.1| exodeoxyribonuclease III [Escherichia coli IHE3034] gi|305851647|gb|EFM52100.1| exonuclease III [Escherichia coli NC101] gi|307626765|gb|ADN71069.1| exonuclease III [Escherichia coli UM146] gi|312288413|gb|EFR16315.1| exodeoxyribonuclease III [Escherichia coli 2362-75] gi|312946349|gb|ADR27176.1| exonuclease III [Escherichia coli O83:H1 str. NRG 857C] gi|320194541|gb|EFW69172.1| Exodeoxyribonuclease III [Escherichia coli WV_060327] gi|323952256|gb|EGB48129.1| exodeoxyribonuclease III [Escherichia coli H252] gi|323956518|gb|EGB52259.1| exodeoxyribonuclease III [Escherichia coli H263] gi|331059029|gb|EGI31006.1| exodeoxyribonuclease III [Escherichia coli TA143] Length = 268 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 82/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKREN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + + F Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + ++ D ++ S Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|82776806|ref|YP_403155.1| exonuclease III [Shigella dysenteriae Sd197] gi|309788829|ref|ZP_07683424.1| exodeoxyribonuclease III [Shigella dysenteriae 1617] gi|81240954|gb|ABB61664.1| exonuclease III [Shigella dysenteriae Sd197] gi|308923100|gb|EFP68612.1| exodeoxyribonuclease III [Shigella dysenteriae 1617] Length = 268 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVDKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEDVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDGEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSPLGNVTVIN-----GYFPQGERRDHPIKFPAKAQFYQNLQNYLETELKRDN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + + F Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + ++ D ++ S Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|34540411|ref|NP_904890.1| hypothetical protein PG0605 [Porphyromonas gingivalis W83] gi|34396724|gb|AAQ65789.1| hypothetical protein PG_0605 [Porphyromonas gingivalis W83] Length = 413 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 38/355 (10%), Positives = 83/355 (23%), Gaps = 63/355 (17%) Query: 2 IRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSEQEGVSLWKNS----------- 46 I K ++ + V R++++N+ L + +S Sbjct: 66 IMKTIIPSIGIAVVSGGFAPHPKPVSFRVMTYNVENLFDCYDDIGKDDSEFLPEGKLRWT 125 Query: 47 VKRTTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS 102 R + K + +V L E+ + + + + + Sbjct: 126 QSRYNRKLKQVASVIKAVGGPDWPALVALVEVENDTVMNNLLSRTP---LGKQSYRYVMT 182 Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLD 161 I A+ R + + + + + +R R + G + V Sbjct: 183 NSPDKRGIDVALLYRPELFSLDHKEEYRVHFRGERNR-RTRNILHAQGRLAGGDTLDVFV 241 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLG 219 H S S + A L+ + +I GD N + Sbjct: 242 CHFPSRRGGV------RQSDAYRHDAATLLRTKCNEILSRRHNPFILIMGDLNSNPDESP 295 Query: 220 NNDDFWK--TIDPNDSLIRFPKEKDSRC-------NANKNLRNKIPIDYFVMDQNAYKFL 270 + + S C +D+ ++ N K Sbjct: 296 LIETLRAGTVLPEAGKAGAGELYNLSGCPLSQIPPGTTLYKGKWEQLDHIIVSGNFLKPD 355 Query: 271 IQESF----------------------SEILYNEDDIKSRGKRLSDHCPISIDYD 303 + S+ SDH P++ ++ Sbjct: 356 SRVSYRTGSAKNVVLPYLVHSAPYNVARIAPNRTYQGMHYKGGYSDHLPVAAEFT 410 >gi|127513190|ref|YP_001094387.1| exonuclease III [Shewanella loihica PV-4] gi|126638485|gb|ABO24128.1| Exodeoxyribonuclease III [Shewanella loihica PV-4] Length = 269 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 86/306 (28%), Gaps = 72/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L+ + DI+ LQE ++ Sbjct: 1 MKIVSFNINGL----------------RARLHQLQALIDSHSPDIIGLQETKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K V Q G A R Sbjct: 42 -------FPLAEVEAMGYQVHYHGGKAHYGVAMLSKLPPVKVQK----GFPTDDDEAQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+++ VL+ F ++ + Q L ++ Q Sbjct: 91 MIMGTFTQANGRQLTVLN-----GYFPQGENISHETKYPAKRKFYQDLMHYLQQHHSPDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 I GD N ++ ++ +T+ + F + Sbjct: 146 DIAIIGDINISPIDLDIGIGEVNAKRWLKTGKCSFQPEEREWLQTLLDWGLVDTFRQLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 +R + ID + + + L + + D + S Sbjct: 206 TRSERYSWFDYRSKGFDDNRGLRIDVILATPSLAERLTES-------DVDYDLRGIDKPS 258 Query: 294 DHCPIS 299 DH PI Sbjct: 259 DHAPIW 264 >gi|58584011|ref|YP_203027.1| nuclease [Xanthomonas oryzae pv. oryzae KACC10331] gi|58428605|gb|AAW77642.1| nuclease [Xanthomonas oryzae pv. oryzae KACC10331] Length = 637 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 84/324 (25%), Gaps = 35/324 (10%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60 L L V +R+ S+ + G + ++ + L Sbjct: 321 LTLPAMPTAVAPQVGGDLRIASFKLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 380 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIA 115 L AD+ L E+ + A + I+ + I I Sbjct: 381 IVPLGADVAALMELENDGNAADAAVAQLVAALNAAGKDKDWHFIDSGSGPGADAIRVGIV 440 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE-LLVEINGKKIWVLDIHLKS-FCFLDSL 173 R V + + L G +R + + G V+ H KS C S Sbjct: 441 YRSSQVTPVGKPATLTGGPFDNH---SRVPLAQAFLSTRGATFVVVANHFKSKGCGNASG 497 Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWK 226 + A+ L +W+ V+ GDFN + Sbjct: 498 ADADQQDGQACWNATRTESAKGLHEWLQTDPTGAQTKRAVLVGDFNAYAMEMPMRS---- 553 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + + F + + D+ ++ K L I + D Sbjct: 554 -LRASGWQDAFAVAGVKQPYSFVYDGMSGRQDHALLSPAMAKQLRGAVEWHINADVMDAA 612 Query: 287 SRG-------KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 613 GYAKRNLPGPWRSSDHDPVLLGFS 636 >gi|53713283|ref|YP_099275.1| hypothetical protein BF1993 [Bacteroides fragilis YCH46] gi|52216148|dbj|BAD48741.1| conserved hypothetical protein [Bacteroides fragilis YCH46] Length = 361 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 89/304 (29%), Gaps = 68/304 (22%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +++ ++N+++ ++ + Y K DI+ QE A Sbjct: 100 ANTLKIATYNVDSFGNEQSGYSC-----------KEIAAYMKEHRVDIICFQEF----AG 144 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + F ++ ++ + + ++ +A+ K + +++ Sbjct: 145 NRYFTSDSIRNAFADWQYAVIP-QAPDSTPILQVALFSKYPVKDSRLITYPDSRNCS--- 200 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP--------------------- 179 + +++NG+ + V + HL++ + Sbjct: 201 -----MWCDLDVNGQTVRVFNNHLQTTEVSQNKRRLERELAKNELTGREEAVAKQLLEGL 255 Query: 180 --SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + + QA+ L+ I + P ++ GDFN + + + F Sbjct: 256 NENFRKRAAQAKTLEQLIRT---TPYPILVCGDFNSLPSSYTYSTVKGDNLQDG-----F 307 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + + IDY + D SDH P Sbjct: 308 QTCGHGYMYTFRYFKRLLRIDYIFHSKEFK-------------GVDYYSPDLDLCSDHNP 354 Query: 298 ISID 301 + ++ Sbjct: 355 VVME 358 >gi|75676002|ref|YP_318423.1| exodeoxyribonuclease III xth [Nitrobacter winogradskyi Nb-255] gi|74420872|gb|ABA05071.1| Exodeoxyribonuclease III [Nitrobacter winogradskyi Nb-255] Length = 266 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 86/305 (28%), Gaps = 71/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +R+ +WN+N L + + D+V LQE+ Sbjct: 1 MRIATWNVN----------------SVRQRLDHLITWLRETAPDVVCLQEIKCVDEQFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + +A+ K + D +R Sbjct: 45 EAIEALGYNVVTH------------GQKTFNGVALLSKFPFDETRPRLAGDDGDVQARF- 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E +V + + V ++L + ++ + Y + L ++ ++ +S Sbjct: 92 ----LEGVVTLEHGAVRVACLYLPNGNPPNTEKYPYK------LKWISRLIEYSRERLKS 141 Query: 202 LVPFVIAGDFNRKI-------NYLGNNDDFWKTIDPNDS-------LIRFPKEKDSRCNA 247 F++AGDFN + +D ++ L + Sbjct: 142 EEAFILAGDFNVIPAPCDVYNSAAWVDDALFRPRTRQAFQTLLGLGLTDALRAVSDAAGE 201 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ A L D ++ SDH P+ Sbjct: 202 YTFWDYQAGAWQKNNGLRIDHLLLSPQASDRLSGAGI-------DRHVRGWEKASDHVPV 254 Query: 299 SIDYD 303 ID D Sbjct: 255 WIDLD 259 >gi|302549548|ref|ZP_07301890.1| endonuclease/exonuclease/phosphatase [Streptomyces viridochromogenes DSM 40736] gi|302467166|gb|EFL30259.1| endonuclease/exonuclease/phosphatase [Streptomyces viridochromogenes DSM 40736] Length = 301 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 83/301 (27%), Gaps = 38/301 (12%) Query: 9 LVFFLVPCTASVAQK----VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 L+ P +++ A + ++++++N+ + + R ++R+ + Sbjct: 25 LLTTAGPTSSASAGEHKGALKVMTFNVRFGTVVD-------RTPRWEVRRPVMRELLRRE 77 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 ++ QE A + T R T + Sbjct: 78 RPHVIGTQEGLYRQVRAIEKDLGEHYDWIGTGRGGGSKDEFMAVFYDTRRLEPLEFDHFW 137 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 P A +++ R + G++ +VL+ HL S S Sbjct: 138 LSGTPYAIASNTWGADWLRMVTWVRFADLAEGGREFYVLNTHL------------DSVSQ 185 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT-IDPNDSLIRFPKE 240 + + + I + +P ++ GDFN + D + Sbjct: 186 YARERSVGLIGETIAGW-DRSLPVIVTGDFNAGAHDNRVYDLMLDIGLVDAWDAAASRGP 244 Query: 241 KDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + R ID+ + + + G SDH P+ Sbjct: 245 AYGTYHGYRGPRPGGRRIDWILTTP---------GVTTHWAGMNTFSRDGTYPSDHLPVQ 295 Query: 300 I 300 Sbjct: 296 A 296 >gi|10957459|ref|NP_051603.1| extracellular nuclease, putative [Deinococcus radiodurans R1] gi|6460888|gb|AAF12592.1|AE001826_61 extracellular nuclease, putative [Deinococcus radiodurans R1] Length = 1067 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 44/319 (13%), Positives = 89/319 (27%), Gaps = 48/319 (15%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTT--SDYTLLRQYAKNLDADIVFLQEMGSYN 78 +R+ N+ G S + + + L+AD++ L E+ + Sbjct: 484 GGSLRVGGANVLNYFTTYGGSTDRGANNAGELARQRAKMATTLTTLNADVLSLMEVQNNG 543 Query: 79 --AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 A+ + T + ++ A++ + + P+ Sbjct: 544 DTALNDLVAALNEKAGAGTYAAVTTGSVGTD-------AIKVAIIYKPSKVTPVGQFMTD 596 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKS-FCFLDSLENTYSPSC--SLLSQQAQWL 191 + +R V G V+ HLKS S + C L +QAQ L Sbjct: 597 NNSVFSRPPVAQTFRDKTTGGVFSVIANHLKSKGSCPTSGDVDTGQGCWNQLRVRQAQAL 656 Query: 192 KDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 ++ +K ++ GDFN K + + + + Sbjct: 657 LGFVDTVKQKSGDQDVLLLGDFNAYGAEDPI-----KVLQGGGFESLNLRIPAEDRYSYQ 711 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------------- 289 +D+ + QN + + + +E I Sbjct: 712 FNGLFGYLDHALASQNLSAQVSGITEWHVNSDEPVIADYNTEFKKVAGCTGTNCTGIDLF 771 Query: 290 -----KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 772 DPTNPFRASDHDPVLVGLN 790 >gi|188994512|ref|YP_001928764.1| hypothetical protein PGN_0648 [Porphyromonas gingivalis ATCC 33277] gi|188594192|dbj|BAG33167.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 351 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 38/355 (10%), Positives = 83/355 (23%), Gaps = 63/355 (17%) Query: 2 IRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSEQEGVSLWKNS----------- 46 I K ++ + V R++++N+ L + +S Sbjct: 4 IMKAIIPSIGIAVVSGGFAPHPKPVSFRVMTYNVENLFDCYDDIGKDDSEFLPEGKLRWT 63 Query: 47 VKRTTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS 102 R + K + +V L E+ + + + + + Sbjct: 64 QSRYNRKLKQVASVIKAVGGPDWPALVALVEVENDTVMNNLLSRTP---LGKQSYRYVMT 120 Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLD 161 I A+ R + + + + + +R R + G + V Sbjct: 121 NSPDKRGIDVALLYRPELFSLDHKEEYRVHFRGERNR-RTRNILHAQGRLAGGDTLDVFV 179 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLG 219 H S S + A L+ + +I GD N + Sbjct: 180 CHFPSRRGGV------RQSDAYRHDAATLLRTKCNEILSRRHNPFILIMGDLNSNPDESP 233 Query: 220 NNDDFWK--TIDPNDSLIRFPKEKDSRC-------NANKNLRNKIPIDYFVMDQNAYKFL 270 + + S C +D+ ++ N K Sbjct: 234 LIETLRAGTVLPEAGKAGAGELYNLSGCPLSQIPPGTTLYKGKWEQLDHIIVSGNFLKPD 293 Query: 271 IQESF----------------------SEILYNEDDIKSRGKRLSDHCPISIDYD 303 + S+ SDH P++ ++ Sbjct: 294 SRVSYRTGSAKNVVLPYLVHSAPYNVARIAPNRTYQGMHYKGGYSDHLPVTAEFT 348 >gi|332558086|ref|ZP_08412408.1| exodeoxyribonuclease III [Rhodobacter sphaeroides WS8N] gi|332275798|gb|EGJ21113.1| exodeoxyribonuclease III [Rhodobacter sphaeroides WS8N] Length = 259 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 88/302 (29%), Gaps = 68/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + L + + + D+V LQE+ S V + Sbjct: 1 MKIATFNING----------------VKARLEALLAWLEAAEPDVVLLQEIKS---VDEG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + +A+ + +D +R Sbjct: 42 FPR-------AAFEDKGWHLETHGQKGFNGVAILSRLPLEDVVRGLPGDPEDVQARW--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E V + + + V ++L + + Y + +K + + Sbjct: 92 --IEATV-VGERAVRVCGLYLPNGNPAPGPKYDYK------LGWMERMKTRAAELLATEE 142 Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGD+N + ++ I F + + Sbjct: 143 PVVLAGDYNVIPQAEDAARPEVWVTDALFLPESRAAFRRIVNLGYTEAFRARTFGPGHYS 202 Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 N I ID+ ++ A + D G++ SDH P+ + Sbjct: 203 FWDYQAGAWEKNNGIRIDHLLLSPQAADLMTDV-------RIDREVRSGEKPSDHVPVWV 255 Query: 301 DY 302 + Sbjct: 256 EL 257 >gi|319399906|gb|EFV88152.1| sphingomyelin phosphodiesterase [Staphylococcus epidermidis FRI909] Length = 327 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 42/299 (14%), Positives = 98/299 (32%), Gaps = 33/299 (11%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++ + N+ L +++ N + +D Y + + D+V L E+ A Sbjct: 35 DSLKITTHNVYFLPT----AIYPNWGQSQRADLISKADYIQ--NQDVVILNELFDKKASK 88 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGA 133 ++ + Y T + ++ N + + K V Q+ + + Sbjct: 89 RLLARLHSQYPYQTPIVGKGTEGWQNTSGTYRKIKKVSGGVGIVSKWPIVQQEQH-IYKK 147 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 AGN+ + + NGK ++ HL++ + + Q +K Sbjct: 148 GCGADMAGNKGFAYIKINKNGKYHHIIGTHLQA----EDPTCFKGKDKDIRQSQMSEIKQ 203 Query: 194 WI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 +I + P I GD N I ++ + ++N + Sbjct: 204 FIKDKNIPKNEPVYIGGDLNV-IKDSEEYQQMANNLNVSLPTQFDGNAYSWDTSSNSIAK 262 Query: 253 N------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPIS 299 +DY ++D++ + + + + + + + SDH P+S Sbjct: 263 YNYPKLEPQHLDYILLDRDHAQPSSWHNDTHRVKSPEWSVKSWGKTYKYNDYSDHYPLS 321 >gi|146307459|ref|YP_001187924.1| exonuclease III [Pseudomonas mendocina ymp] gi|145575660|gb|ABP85192.1| Exodeoxyribonuclease III [Pseudomonas mendocina ymp] Length = 270 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 84/311 (27%), Gaps = 74/311 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGL----------------RARPHQLEALIAKHQPDVIGLQE---TKVADEQ 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ S R + + H +A+ + + Q G + + R Sbjct: 42 FPE-------SEIRQLGYHVHYHGQKGHYGVALLSRQEPLNLQK----GFPNDGEESQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +G + V++ F + + L+ + ++ + Sbjct: 91 FIYGTFADAHGNPVTVMN-----GYFPQGESRDHPVKFPAKQRFYADLQQLLVERFDPQQ 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 V+ GD N ++L ++ T+ + F Sbjct: 146 ALVVMGDINISPEDCDIGIGEANRLRWLKTGKCSFLPEEREWLATLKNWGLVDSFRHLNP 205 Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + ID + Q L D + Sbjct: 206 TVNDRFSWFDYRSRGFEDEPKRGLRIDVILASQALQGRLKDAGI-------DYDLRGMDK 258 Query: 292 LSDHCPISIDY 302 SDH PI ++ Sbjct: 259 PSDHAPIWLEL 269 >gi|154248160|ref|YP_001419118.1| exodeoxyribonuclease III Xth [Xanthobacter autotrophicus Py2] gi|154162245|gb|ABS69461.1| exodeoxyribonuclease III Xth [Xanthobacter autotrophicus Py2] Length = 262 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 39/302 (12%), Positives = 82/302 (27%), Gaps = 67/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N ++ DIV +QE+ Sbjct: 1 MRIATWNVN----------------SIRQRLDHAVRWLGETRPDIVCIQEIKCQTEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ +A+ + D +R Sbjct: 42 -------FPKEAFEQLGYNVTVHGQKGFNGVALLSRLPLEDVTHGLAGDDGDVQARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E +V + G + V ++L + +D+ + Y + L+ + + + Sbjct: 92 --IEAVVSVKGGVVRVACLYLPNGNPVDTEKYPYKLGF------MERLEAFAADRLKLEE 143 Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249 P ++AGDFN + + + + L + Sbjct: 144 PLILAGDFNVIPEARDAADPSAWVGDALFLPRTRSAFRSLTHLGLTDALRATSDAGRLYT 203 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A LI D ++ SDH PI Sbjct: 204 FWDYQAGAWQRDMGIRIDHLLLSPQAADKLIATGI-------DKHVRAWEKPSDHVPIWA 256 Query: 301 DY 302 D Sbjct: 257 DL 258 >gi|114562882|ref|YP_750395.1| endonuclease/exonuclease/phosphatase [Shewanella frigidimarina NCIMB 400] gi|114334175|gb|ABI71557.1| Endonuclease/exonuclease/phosphatase [Shewanella frigidimarina NCIMB 400] Length = 955 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 41/331 (12%), Positives = 91/331 (27%), Gaps = 51/331 (15%) Query: 19 SVAQKVRLVSWNI-NTLSEQEGVSLWK-----NSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++ +R+ S+N+ N + + + +++ + ++AD+ L Sbjct: 461 ALGADLRVASFNVLNYFNGDGNGNGFPTDRGADTLSEFERQRVKIISAMHAINADVFGLM 520 Query: 73 EMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNV----- 121 E+ + +A+ + + + S D I + R + Sbjct: 521 EIENDGYGSDSAINDLVSGLNQAMGAEVYAYVVPSVTQIGTDAIAVGMIYRADKITPTGD 580 Query: 122 ---RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK--KIWVLDIHLKSFCF------L 170 S F NR + +N + I V HLKS Sbjct: 581 AQILSSANSPVDGNGTALFDDGKNRPMLTQSFMLNDRNDSIVVAVNHLKSKGSSCDSIND 640 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 L + ++ + W+ + ++ GD N + Sbjct: 641 PDLFDGQGNCNLTRTRATDAIGQWLMAQYPE-QKILVIGDLNAYAKENP-----LTQLAN 694 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR-- 288 + + + +D+ + +Q ++ + I +E I Sbjct: 695 HGYSELNAHFGNVNSYSYMFSGESGQLDHALANQALLDNVLAITEWHINADEPRILDYNE 754 Query: 289 ---------------GKRLSDHCPISIDYDF 304 G R SDH P+ + F Sbjct: 755 EYKSAAQILDLYHADGFRSSDHDPVIVSLQF 785 >gi|326795198|ref|YP_004313018.1| exodeoxyribonuclease III [Marinomonas mediterranea MMB-1] gi|326545962|gb|ADZ91182.1| exodeoxyribonuclease III [Marinomonas mediterranea MMB-1] Length = 268 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 32/314 (10%), Positives = 78/314 (24%), Gaps = 80/314 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++S+NIN L + + + D++ LQE + Sbjct: 1 MKVISFNINGL----------------RARPHQIAALVEKHQPDVIGLQEIKVHDDAFPK 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ ++++ +Y H +A+ K + +D+ Sbjct: 45 EIPEEHSYHAYYY------------GQKSHYGVAIFSKQPATSVEYGFPTDEEDA----- 87 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 RR + + + V++ F + + L ++ Sbjct: 88 QRRMIIATFDTENGPVKVIN-----GYFPQGESRDHETKFPAKRKFYADLMAYLASH-SK 141 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 ++ GD N L +++ + + + + Sbjct: 142 DEKIIVMGDVNISPTDLDIGIGEKNAKRWLKTGKCSFLPEEREWFDALLDWGFVDTYRSQ 201 Query: 241 KDSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + ID + L D Sbjct: 202 NPESNELFSWFDYRSKGFEDTPKRGLRIDVILASNGLINQLEATGI-------DYDIRGI 254 Query: 290 KRLSDHCPISIDYD 303 ++ SDH PI + Sbjct: 255 EKPSDHAPIWASFS 268 >gi|194433512|ref|ZP_03065790.1| exodeoxyribonuclease III [Shigella dysenteriae 1012] gi|194418275|gb|EDX34366.1| exodeoxyribonuclease III [Shigella dysenteriae 1012] gi|320181218|gb|EFW56137.1| Exodeoxyribonuclease III [Shigella boydii ATCC 9905] gi|332085670|gb|EGI90834.1| exodeoxyribonuclease III [Shigella dysenteriae 155-74] gi|332090564|gb|EGI95661.1| exodeoxyribonuclease III [Shigella boydii 5216-82] Length = 268 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 82/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLEAELKREN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + + F Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + ++ D ++ S Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|330446636|ref|ZP_08310288.1| exodeoxyribonuclease III [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490827|dbj|GAA04785.1| exodeoxyribonuclease III [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 268 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 36/310 (11%), Positives = 91/310 (29%), Gaps = 74/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ + D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQALIEKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K + Q +D+ R Sbjct: 42 -------FPLADVEAMGYKVYFHGQKAHYGVAMLCKQEPISVQKGFPTDDEDA-----QR 89 Query: 144 RAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + NGK + V++ F ++ + L +++ + Sbjct: 90 RMIMATFKQENGKDLTVMN-----GYFPQGDNVSHETKFPAKEKFYADLMNYLNTAHTND 144 Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241 ++ GD N ++ ++ +T+ + F + Sbjct: 145 EELIVMGDINISPIDLDIGIGPANAKRWLKTGKCSFQPIEREWLQTLLDWGFIDTFRQLH 204 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + + ID + + + ++ + D ++ Sbjct: 205 PTVDDKFSWFDYRSKGFVDNRGLRIDVILATPSLAERCVES-------DIDYELRGIEKP 257 Query: 293 SDHCPISIDY 302 SDH PI + Sbjct: 258 SDHAPIWSTF 267 >gi|150397136|ref|YP_001327603.1| endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419] gi|150028651|gb|ABR60768.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419] Length = 368 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 53/366 (14%), Positives = 107/366 (29%), Gaps = 85/366 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKN----------SVKRTTSDYTLLRQY------------ 60 +RL ++NI L + S ++N R+ ++Y L + Sbjct: 2 SLRLATFNIENLMSRFDFSGFRNHLKQDRVLRLFDVRSEAEYQRLEEARTIAHTDDVRQM 61 Query: 61 ----AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + DADI+ LQE + A+ + + + R + + I A+ + Sbjct: 62 SALAIADCDADILCLQEADNMAALQAFEYGYLFRMVGNGYRQKYLVEGNDTRGIDVAVMM 121 Query: 117 RK------KNVRVLQQSYPLLGAKDSF-------------SRAGNRRAVELLVEINGKKI 157 R+ K + +S+ L +D R R +E+ V I G+ + Sbjct: 122 REETRDGQKIECLEVKSHAALTYEDLDLFNDELALTNRPRDRIFKRDCLEVDVRIGGRPL 181 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP----FVIAGDFNR 213 + +HLKS + + ++ + + ++ I + S F + GD N Sbjct: 182 TLYVVHLKSMGPAREGLDGRQATMAVRRAEVKAVRHIIEGRFGSGDTADKIFAVCGDMND 241 Query: 214 KINY---------------LGNNDDFWKTIDPNDSL--IRFPKEKDSRCNANKNLRNKIP 256 + + + + R + + Sbjct: 242 YQEKVNVLGDRRNGYEFVPYEETSSALDVLSHDGFVVNPMLRRPVLDRWTLFHSRGPEER 301 Query: 257 ----IDYFVMDQNAYKFLIQESFSEILY---------------NEDDIKSRGKRLSDHCP 297 +DY + Q + I + SDHCP Sbjct: 302 HLCQLDYIWLSQELARRNAARVPEVIRAGQPYRTIFPAGQEVERYPRTGWDRPKASDHCP 361 Query: 298 ISIDYD 303 + + D Sbjct: 362 VVMTLD 367 >gi|330719976|gb|EGG98428.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC2047] Length = 271 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 36/312 (11%), Positives = 81/312 (25%), Gaps = 74/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN + L+ + D++ LQE + Sbjct: 1 MKIISFNING----------------IRARIPQLQAIIDHHQPDVIGLQESKVND----- 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ H +A+ + Q +D+ R Sbjct: 40 -----PDFPVEAINNMGYAVNYHGQKSHYGVAMLSRMEPKAIQKGWPDDGEDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + E + + + + F N + + L +++ Sbjct: 90 RMIIGQFECSDGGLITVL----NGYFPQGESNKHETKFPAKRKFYADLMNYLETHHTPSD 145 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 V+ GDFN +++ + L F + Sbjct: 146 RVVVMGDFNISPTDNDIGIGEKNAKRWLQTGKCSFLPEEREWYDRLLAWGLLDSFRIQNP 205 Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID+ ++ Q + L D ++ Sbjct: 206 EVNDRYSWFDYRSKGFDDTPKRGLRIDHILITQPLVEHLADTGI-------DYEARAMEK 258 Query: 292 LSDHCPISIDYD 303 SDHCP+ + Sbjct: 259 PSDHCPVWASLN 270 >gi|295096134|emb|CBK85224.1| Exodeoxyribonuclease III [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 268 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 84/309 (27%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEQHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K+ V + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKDTPVSVRR-----GFPGDDEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + ++ Q L++++T + + Sbjct: 90 RIIMAEIPSALGNVTVIN-----GYFPQGESRDHETKFPAKAKFYQDLQNYLTTELKKEN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + + F Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLLGWGLVDTFRTANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + + ID + + I+ D ++ S Sbjct: 205 ATQDRFSWFDYRSKGFDDNRGLRIDLLLASAPLAERCIETGI-------DYDIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|254251949|ref|ZP_04945267.1| Exonuclease III [Burkholderia dolosa AUO158] gi|124894558|gb|EAY68438.1| Exonuclease III [Burkholderia dolosa AUO158] Length = 281 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 33/303 (10%), Positives = 80/303 (26%), Gaps = 68/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + AD++ LQE Sbjct: 24 MKIATWNVNSLN----------------VRKQHVLDWLAQSGADVLCLQE---------- 57 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + +A+ +N + +S + Sbjct: 58 LKLPDEKYPRADLEAVGYRSWFTGQKTYNGVAILARNTLTVDESDVVRNIPGFDDPQQRV 117 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 AV + + ++ + + +DS + Y Q L W+ + + Sbjct: 118 VAVTVE------GVRIVSAYFPNGQAVDSDKFVYK------MQWLDALHAWLAAEMQRYP 165 Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249 + GDFN +D + P + + + Sbjct: 166 KLALLGDFNIAPEDRDVHDPAKWEGQNLVSPQERAHFAKLIELGFVDAFRRFEQPEKTFT 225 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ D ++ SDH P+ Sbjct: 226 WWDYRMFAFRRNAGLRIDHILLSPALADTCTSC-------VVDRAPRTWEQPSDHTPVVA 278 Query: 301 DYD 303 Sbjct: 279 TVS 281 >gi|85703273|ref|ZP_01034377.1| exodeoxyribonuclease III [Roseovarius sp. 217] gi|85672201|gb|EAQ27058.1| exodeoxyribonuclease III [Roseovarius sp. 217] Length = 260 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 83/303 (27%), Gaps = 67/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + L + D+V LQE+ S V Sbjct: 1 MKIATFNING----------------IKARIDALPAWLDEAAPDVVLLQEIKS---VDDG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + ++ +A+ K D +R Sbjct: 42 FPREIF-------EDLGYNVETHGQKGFNGVAILSKRPLEDVTRGLPGDDTDEQARW--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E V + + + + ++L + + Y + + L+ S Sbjct: 92 --IEATVMGDHRALRLCGLYLPNGNPTPGPKYDYKLA------WMERLQARARDLLASEE 143 Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD+N + ++ I F + Sbjct: 144 PVLMGGDYNIIPQDEDAARPEAWREDALALPESRAAFRRILNLGFTEAFRARVQGPGHYT 203 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ID+F++ A L D + SDH P+ + Sbjct: 204 FWDYQAGAWNKNDGIRIDHFLLSPQAADLLTDCGI-------DKEIRARDKPSDHVPLWV 256 Query: 301 DYD 303 + D Sbjct: 257 EID 259 >gi|294054975|ref|YP_003548633.1| Endonuclease/exonuclease/phosphatase [Coraliomargarita akajimensis DSM 45221] gi|293614308|gb|ADE54463.1| Endonuclease/exonuclease/phosphatase [Coraliomargarita akajimensis DSM 45221] Length = 299 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 56/312 (17%), Positives = 115/312 (36%), Gaps = 24/312 (7%) Query: 2 IRKYVLALVFFL--VPCTASVAQKVRLVSWNINTLSEQEG--VSLWKNSVKRTTSDYTLL 57 +R +A F L V C A+ AQ +R+ S N++ + W+ + S+ L Sbjct: 1 MRSSWIAACFLLGVVSCFAAQAQ-LRVASLNLDNYLIMDRSVDGRWRKEYPKPESEKHAL 59 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 RQ ++ D++ +QE+G + ++ + + R S+ H A+ Sbjct: 60 RQAILSVRPDVLVVQEIGGAEFLEELRLDLANLGLEYSSAIH---MRGSDTVRHVAVLSM 116 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENT 176 + + + + L A +A +R +EL E G+ + +HLKS + Sbjct: 117 VE-PQSIVRHADLNFAYMERRQAVSRGLLELSFEGRGGQNFRLFAVHLKSRRTTE---KA 172 Query: 177 YSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 S +++A+ ++ I + +P+++ GDFN F++ + Sbjct: 173 DPQSVLWRTREAEACRNRIIERHDGDGNLPYLVVGDFNDHPRSSTLRR-FYQRGERELGH 231 Query: 235 IRFPKEKDSRCNANKN--LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + + + +D FV + + + R Sbjct: 232 WVPAADSRGQVWTHFYAREYSYSTVDGFVASPELLPSIKNGRATIV------DDPRTLSA 285 Query: 293 SDHCPISIDYDF 304 SDH + +D DF Sbjct: 286 SDHRMVYLDLDF 297 >gi|220933200|ref|YP_002512099.1| exodeoxyribonuclease III [Thioalkalivibrio sp. HL-EbGR7] gi|219994510|gb|ACL71112.1| exodeoxyribonuclease III [Thioalkalivibrio sp. HL-EbGR7] Length = 255 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 80/303 (26%), Gaps = 74/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + + D++ LQE + Sbjct: 1 MKIATWNVNSL----------------KVRLPQVLDWLAAQQPDVLALQETKLTDDA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + S + +A+ ++ + R Sbjct: 42 -------FPVEAIREAGYHCVYSGQKTYNGVAILARHELL------DPLTDIDGLDDPQR 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V+ + V+++++ + + S + Y + +I + + Sbjct: 89 RILAATVD----GVRVINLYVVNGSEVGSEKYAYKLD------WLGKVTGFIAGEMKRHE 138 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN +D K I F + + + Sbjct: 139 KLVVLGDFNIAPEDRDVHDPEAWHEKILCSTPEREALKKILDLGLSDCFRRF-EQPEQSF 197 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID + + R +R SDH P+ Sbjct: 198 SWWDYRAAGFRRNLGLRIDLILSSPALTETCTACIIDVE-------PRRLERPSDHAPVV 250 Query: 300 IDY 302 ++ Sbjct: 251 AEF 253 >gi|126725257|ref|ZP_01741099.1| exodeoxyribonuclease III [Rhodobacterales bacterium HTCC2150] gi|126704461|gb|EBA03552.1| exodeoxyribonuclease III [Rhodobacterales bacterium HTCC2150] Length = 259 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 84/303 (27%), Gaps = 68/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ S+NIN + L ++ D+V LQE+ S Sbjct: 1 MKIASFNING----------------IKARINALPEWLAEAKPDVVLLQEIKS------- 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 +N + ++ +A+ + D +R Sbjct: 38 VDENFPRELFEDM---GYTVETHGQKSFNGVAILSRLPLEDITRGLPGDDTDEQARW--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E V + + V ++L + + + Y + L+ + E Sbjct: 92 --IEATV-MGKTPVRVCGLYLPNGNPVPGPKYDYKLA------WMDRLQARAVELLEIEE 142 Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 PFV+AGD+N + ++ + F + + Sbjct: 143 PFVVAGDYNIIPQDEDAKHPEVWVEDALARPESRAAYRRLLNLGFTEVFRTRNPGPGHYS 202 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+F+ + D ++ SDH P+ I Sbjct: 203 FWDYQRGAWDKNDGIRIDHFLASPECADLVTDCQI-------DSYVRGREKPSDHVPVWI 255 Query: 301 DYD 303 + D Sbjct: 256 ELD 258 >gi|91225244|ref|ZP_01260412.1| exodeoxyribonuclease III [Vibrio alginolyticus 12G01] gi|91189883|gb|EAS76155.1| exodeoxyribonuclease III [Vibrio alginolyticus 12G01] Length = 268 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 85/309 (27%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K + Q G R Sbjct: 42 -------FPIEAVEAMGYKVYFHGQKAHYGVAMLCKQEPLHVQK----GFPTDNEEHQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+K+ VL+ F ++ Q + L ++ + Sbjct: 91 MIMATFLNENGEKVTVLN-----GYFPQGDNISHETKFPYKRQFYKDLMTYLNDHHNNDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ ++ KT+ + F K Sbjct: 146 QLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSFQPEEREWLKTLLDWGFVDTFRKLYP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + + I+ D ++ S Sbjct: 206 EVNDQFSWFDYRSRGFDDNRGLRIDVILATPSLAEKCIESGI-------DYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|303258098|ref|ZP_07344106.1| exodeoxyribonuclease III [Burkholderiales bacterium 1_1_47] gi|330998688|ref|ZP_08322417.1| exodeoxyribonuclease III [Parasutterella excrementihominis YIT 11859] gi|302859117|gb|EFL82200.1| exodeoxyribonuclease III [Burkholderiales bacterium 1_1_47] gi|329576427|gb|EGG57939.1| exodeoxyribonuclease III [Parasutterella excrementihominis YIT 11859] Length = 265 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 94/305 (30%), Gaps = 66/305 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + + +WN+N+L + + K + I+ LQE+ A Sbjct: 2 SITITTWNVNSL----------------KVRQPQVLDFLKETENSILCLQELKMQEA--- 42 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 I S + I ++ + +A ++ + F + Sbjct: 43 -------DIDASAFKEIGYTLDAFGQKTYNGVATILRDPLTFLPDEEVRNIP-GFEDPQS 94 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + V + +++ V++ + + ++S + Y S + L +W+ + E Sbjct: 95 R-LLAATVRVGCERLRVINGYFPNGETVESEKFPYKLS------WLEALAEWLPSQLEQY 147 Query: 203 VPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNA 247 V+ GDFN D ++ + L + + + Sbjct: 148 PNLVLLGDFNIAPEDRDVWDPESWAESVLCTPKAREAFQRLIDLG-LTDSFRAFEQPEKS 206 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ++ ID+ ++ + + + + +R SDH P+ Sbjct: 207 YSWWDYRMMAFRRNRGLRIDHILISKALVSKNLGVEIHKKV-------RGNERPSDHAPV 259 Query: 299 SIDYD 303 ++ D Sbjct: 260 TLTLD 264 >gi|332879788|ref|ZP_08447478.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682307|gb|EGJ55214.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 352 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 34/348 (9%), Positives = 87/348 (25%), Gaps = 57/348 (16%) Query: 1 MIRKYVLALVFFLVPCTASVAQKV---RLVSWNINTLSE--QEGVSLWKNSVKRTTSDY- 54 M R +L + + +K + +N+ L + + + + Sbjct: 5 MRRNLILVWCLLALAYVNAQPKKFMVRTVAFYNVENLFDTINDPHKFDDDRTPNGADRWT 64 Query: 55 --------TLLRQYAKN-------LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99 + + DI+ + E+ + + + + Sbjct: 65 SKVYNDHVQKIAKVLSEIGTDVTHHAPDIIGVAEIENDVVLTDLINTPYLKKY-----NY 119 Query: 100 NHSKRDSNNDIHTAIAVRKK---NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK 156 +S + +A+ K +++PL K+ R + + +++G++ Sbjct: 120 GIVHYESPDARGVDVALLYKQGVFKPSSSKAHPLYLTKEDGKPLYTRDQLLVSGDLDGEE 179 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216 + + H S ++ + L++Q + + + GDFN Sbjct: 180 VHFIVNHWPSRLGGEAKSRPMREKAAALNKQI--IDSLLK--INPNAKIMSMGDFNDDPI 235 Query: 217 YLGNNDDFWKT-----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 G + + P + D + K Sbjct: 236 NSGFKNILKTKDKKEDVKPGELFNPMEAMLKKGMGTLAYQDGWNLFDQIYFTYDLLKEDK 295 Query: 272 QE-------------------SFSEILYNEDDIKSRGKRLSDHCPISI 300 + + + SDH P+ I Sbjct: 296 SSYRYWKAGIFNRPYLANPKGRYKGYPFRSMANGNYTWGYSDHFPVYI 343 >gi|160891511|ref|ZP_02072514.1| hypothetical protein BACUNI_03962 [Bacteroides uniformis ATCC 8492] gi|156858918|gb|EDO52349.1| hypothetical protein BACUNI_03962 [Bacteroides uniformis ATCC 8492] Length = 283 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 83/310 (26%), Gaps = 43/310 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 I ++ + C KV ++S+NI + +S+ Q Sbjct: 6 INSVLVVFALLVASCGRQPEAKVEVMSFNIR-------LDHVADSMNNWKYRKDHAAQMI 58 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 DI+ +QE+ + + T K+ Sbjct: 59 AYYAPDIIGMQEVVKNQLDDLKERLPQYTALGVGRADGEEKGEYCSLFYKTDRFELLKSG 118 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSP 179 P K + A R ++ +++G++I + H F + Sbjct: 119 NFGLSETPDSIGKKGWDAACERIVTWAVLKDKVSGREIAAFNTH-----FDHVGKVARRE 173 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND--SLIRF 237 S L+ ++ + + +P ++ DFN ++ + + Sbjct: 174 SAVLILEKIKQMA--------GDLPVIVTRDFNGTVDSEPV-----TVLTEGGMKNACVT 220 Query: 238 PKEKDSRCNANKNLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 K + + + ID+ + Y D K L Sbjct: 221 AKVAYGPTWSFHDFGRIPVEKRRLIDFIFIKGA---------VEVERYRTIDDKPDNGYL 271 Query: 293 SDHCPISIDY 302 SDH P+ Sbjct: 272 SDHAPVMAIL 281 >gi|124009803|ref|ZP_01694472.1| endonuclease/exonuclease/phosphatase [Microscilla marina ATCC 23134] gi|123984211|gb|EAY24567.1| endonuclease/exonuclease/phosphatase [Microscilla marina ATCC 23134] Length = 356 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 44/335 (13%), Positives = 98/335 (29%), Gaps = 67/335 (20%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWK-----NSVKRTTSD-----YTLLRQYAKNL 64 T Q ++++SWN+ ++ + V + R + D + + Sbjct: 36 APTLKAGQSLKVLSWNVQYMAGKGYVFFYDLLDNSGPDTRPSKDSISLTIKEVARIITQE 95 Query: 65 DADIVFLQEM-------GSYNAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAI- 114 D DI+ LQE+ + + ++ + S D + + Sbjct: 96 DPDIILLQEIDEGAARTDKEDQLKRLLGLINKAYQCHCSAFYWKASFVPDPHVMGSVGMK 155 Query: 115 ---AVRKKNVRVLQQSYPLLGAKDSFSRAGN-RRAVELLVEING-KKIWVLDIHLKSFCF 169 + K ++ PL+ + R +E + + G K + VL+ HL +F Sbjct: 156 LSTISKYKISEGIRHQLPLIPQNFLVQQFYLKRAVLETKMPVEGNKDLLVLNTHLSAFAQ 215 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD------ 223 + + QQ + + ++ + P+++ GDFN Sbjct: 216 GTN----------TMEQQVVHVNKMLKERTKQGHPWLLGGDFNLLPVGNAYRTLPKYQKK 265 Query: 224 -------FWKTIDPNDSLIRFPKEKDSRCNANKNL--------RNKIPIDYFVMDQNAYK 268 + ++ + + + IDY +N Sbjct: 266 YYKPKTEIASFFNDYQAVPNIEQTRGENRAEWFTHFPNDPRVKQPDRTIDYIFFSKNI-- 323 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 L + +SDH P+ ++ Sbjct: 324 ---------DLGKTGIGQKDTWSISDHLPLMAEFS 349 >gi|114321929|ref|YP_743612.1| exodeoxyribonuclease III [Alkalilimnicola ehrlichii MLHE-1] gi|114228323|gb|ABI58122.1| Exodeoxyribonuclease III [Alkalilimnicola ehrlichii MLHE-1] Length = 258 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 92/306 (30%), Gaps = 76/306 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++L SWN+N+L + + ++ D+V LQE + A Sbjct: 1 MKLASWNVNSL----------------KVRLPQVLDWLESRQPDLVGLQETKLTDERFPA 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + Y+ + N A+ R + + + P L Sbjct: 45 EALNEAGYQVAYAGQPTYN----------GVAVLARGRAPEAVIRDIPGLDDP------- 87 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 RR + + V + +++++ + + S + Y L DW+ +++ Sbjct: 88 QRRVLGVTV----GDLRFINLYVPNGSEVGSEKYAYKLD------WLARLADWLAEERRR 137 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 V+ GDFN + +D + + L + D Sbjct: 138 HDKLVVVGDFNIAPDDRDVHDPELWREKVLCSTPEREALRRLTGELGLTDTFRLFDQPEK 197 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 ++ ID + Y+ D +R SDH P Sbjct: 198 VWSWWDYRMNNFKRNRGLRIDLVLASPALYQACTSSYV-------DREPRTWERPSDHAP 250 Query: 298 ISIDYD 303 +++ Sbjct: 251 AVAEFN 256 >gi|315126445|ref|YP_004068448.1| exonuclease III [Pseudoalteromonas sp. SM9913] gi|315014959|gb|ADT68297.1| exonuclease III [Pseudoalteromonas sp. SM9913] Length = 268 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 81/310 (26%), Gaps = 72/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ DI+ LQE+ + Sbjct: 1 MKVISFNINGL----------------RARLHQLQAIIDKHQPDIIGLQEI---KVHDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + + H +A+ K L G + R Sbjct: 42 FPLD-------DVQKMGYHVYFHGQKAHYGVAMLCKKEPKSV----LKGFSTDTDESQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+ + V++ F + Q Q L + Sbjct: 91 MISVTVEQENGRDLHVMN-----GYFPQGDNINHETKFPYKRQFYQDLMTHLNSHYTPDQ 145 Query: 204 PFVIAGDFNRKINYLGN---------------------NDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N L ++ T+ F ++ Sbjct: 146 DVIVMGDINISPTDLDIGIGEVNAKRWLKTGKCSFQPVEREWLATLLNWGFKDTFREQNP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + I D + S Sbjct: 206 ETNDQYSWFDYRSKGFVDNRGLRIDVVLATHDLAARCIDTGI-------DYELRAIDKPS 258 Query: 294 DHCPISIDYD 303 DH PI +++ Sbjct: 259 DHAPIWSEFN 268 >gi|238910880|ref|ZP_04654717.1| exonuclease III [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 268 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE ++ Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDEM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKATPISVRR-----GFPDDGEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + I V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSPLGNITVIN-----GYFPQGESRDHPLKFPAKAQFYQNLQNYLETELKRDN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + F + Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMSRLLKWGLVDTFRQANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + + D ++ S Sbjct: 205 QTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAERCAETGI-------DYDIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|218695307|ref|YP_002402974.1| exonuclease III [Escherichia coli 55989] gi|331668438|ref|ZP_08369286.1| exodeoxyribonuclease III [Escherichia coli TA271] gi|218352039|emb|CAU97776.1| exonuclease III [Escherichia coli 55989] gi|323948123|gb|EGB44113.1| exodeoxyribonuclease III [Escherichia coli H120] gi|324119235|gb|EGC13123.1| exodeoxyribonuclease III [Escherichia coli E1167] gi|331063632|gb|EGI35543.1| exodeoxyribonuclease III [Escherichia coli TA271] Length = 268 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + F Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRHANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + ++ D ++ S Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|307591319|ref|YP_003900118.1| endonuclease I [Cyanothece sp. PCC 7822] gi|306986173|gb|ADN18052.1| Endonuclease I [Cyanothece sp. PCC 7822] Length = 573 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 45/330 (13%), Positives = 96/330 (29%), Gaps = 52/330 (15%) Query: 5 YVLALVFFLVPCTASVAQ--KVRLVSWNINTLSEQ-------EGVSLWKNSVKRTTSDYT 55 Y LA A V ++ + ++N+ L Q + ++ Sbjct: 14 YSLAQFALAPAVLAQVKDFNQLSVATFNVENLDPQKEALAKVKDKDPDNVDDDVAKGKFS 73 Query: 56 LLRQYAKN--LDADIVFLQEMGSYNAVA------------------KVFPKNTWCIFYST 95 L + N DI+ LQE+ + K ++ ++ Sbjct: 74 ALAKEIVNDLQAPDIIALQEIQDNDGAELSSVVDASVTANTLIDAIKSAGGPSY-LYRDI 132 Query: 96 ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155 + +I A V++ L + + + +RR + N Sbjct: 133 PPEKDQEGGQPGGNIRVAFLFNPARVKLQ----KLERFSSNVAFSDSRRPLVGEFTFNNN 188 Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNR 213 I +++ HLKS S +QA+ + +++ + ++ GDFN Sbjct: 189 AITIINNHLKSKSGGAV------ASLGQRVEQAKLVNQFVSDLLETNPTASIIVLGDFND 242 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273 + ++ K + + N+ ID ++ +N Sbjct: 243 TPDSPAVQTLLGTVLE-----NLTEKIPLAERYSFIFKGNRELIDQILVSENL-----AS 292 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + R SDH P+ + Sbjct: 293 GGQPEIKAVHVNAGKPGRASDHDPVIASFT 322 >gi|113477060|ref|YP_723121.1| exodeoxyribonuclease III [Trichodesmium erythraeum IMS101] gi|110168108|gb|ABG52648.1| Exodeoxyribonuclease III [Trichodesmium erythraeum IMS101] Length = 261 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 90/305 (29%), Gaps = 70/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ +WN+N + + ++ K DI+ LQE + + Sbjct: 1 MKIATWNVN----------------SIRTRKQQVIEWLKANSVDILCLQETKVIDQDFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 F + + I+ S ++ N AI R + P+LG Sbjct: 45 SPFAELGYHIYVSGQKSYN----------GVAIFSRSPMEDISSGFAPILGDHKVGDFDI 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R + ++ + +L++++ + + S + Y + L++++ + Sbjct: 95 QKRLITGVIN----DVRILNLYVPNGSSVGSEKYDYKLD------WLKLLQEYVKIILDK 144 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 I GDFN D + I + F + + Sbjct: 145 SPNLCICGDFNIVPEDRDIYDPEGCKNSVGLSDLERQALQEILKLGLVDAFRQFTTEGGH 204 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ + + D + SDH P Sbjct: 205 -YSWWDYRAAGFRRNRGWRIDHHYLSLPLSQKATMCVI-------DKNPRELLKPSDHAP 256 Query: 298 ISIDY 302 + +++ Sbjct: 257 VIVEF 261 >gi|254468067|ref|ZP_05081473.1| exodeoxyribonuclease III [beta proteobacterium KB13] gi|207086877|gb|EDZ64160.1| exodeoxyribonuclease III [beta proteobacterium KB13] Length = 256 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 90/304 (29%), Gaps = 71/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++SWN+N+L + L + D++ LQE S + Sbjct: 1 MKIISWNVNSL----------------KIRHNQLVDIINKHNPDVISLQETKSQDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ K + + + + Sbjct: 41 ------NFPIESFNNLGYQSIFTGQKTFNGVAIITKLP------FENILLNIPNFQDEQK 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R V V+ + +KI +++ + + LDS + Y S L +I Sbjct: 89 RFVSAEVKFDDRKIIIMNGYFPNGQSLDSDKFIYKQS------WVNALLKFIKT---KNS 139 Query: 204 PFVIAGDFNRKINY---LGNNDDFWKTIDPN-----------DSLIRFPKEKDSRCNANK 249 ++ GDFN + + + + + + Sbjct: 140 DSLLMGDFNIAPDDIDCHDPEKWVGTVLTSDIERNLFKEIIECNFTDTHRYLNKNEPGFT 199 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ + + FL ++ + +R SDH PI + Sbjct: 200 WWDYRMAAFRRNLGLRIDHILASHDLINFLKD-------FSVLSDYRKLERPSDHAPIML 252 Query: 301 DYDF 304 +F Sbjct: 253 TLNF 256 >gi|323135771|ref|ZP_08070854.1| exodeoxyribonuclease III [Methylocystis sp. ATCC 49242] gi|322398862|gb|EFY01381.1| exodeoxyribonuclease III [Methylocystis sp. ATCC 49242] Length = 269 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 80/310 (25%), Gaps = 66/310 (21%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +Q++R+ +WN+N + L + K DI+ LQE+ Sbjct: 2 APRGSQELRVATWNVN----------------SVRQRLSPLLAFLKETAPDILCLQELKC 45 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + S ++ +A+ +G Sbjct: 46 ED----------HAFPRSEIEDAGYNVVVHGQKTFNGVAILSNRPIEETT----IGLPGF 91 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 A +R ++ + G + V I+ + D+ + TY + + L Sbjct: 92 DGEAQSRYVEAVISDGAGGVLRVASIYAPNGNPPDTPKYTYKLAF------MEALTRHAA 145 Query: 197 QKKESLVPFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKD 242 ++AGD+N +D + N + Sbjct: 146 DLLRLEEVTILAGDYNVIPEARDVHDPAAWIGDALFMPQSRAALQRVINLGYTDALRAVT 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + ID+ ++ A L G++ S Sbjct: 206 DEPGLYTFWDYQAGAWQKNRGLRIDHLLLSPRAADRLAGVEIH-------KSMRAGEKPS 258 Query: 294 DHCPISIDYD 303 DH IS + Sbjct: 259 DHVAISAELT 268 >gi|218699684|ref|YP_002407313.1| exonuclease III [Escherichia coli IAI39] gi|218369670|emb|CAR17439.1| exonuclease III [Escherichia coli IAI39] Length = 268 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 82/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPDDGEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + +Q Q L++++ + + Sbjct: 90 RIIIAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKREN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + + F Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + ++ D ++ S Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|291615383|ref|YP_003525540.1| exodeoxyribonuclease III Xth [Sideroxydans lithotrophicus ES-1] gi|291585495|gb|ADE13153.1| exodeoxyribonuclease III Xth [Sideroxydans lithotrophicus ES-1] Length = 252 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 36/302 (11%), Positives = 86/302 (28%), Gaps = 76/302 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N+L L ++ D+V LQE S + Sbjct: 1 MKLATWNVNSL----------------KVRLPHLLEWLAANPVDVVCLQETKSED----- 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + S + +A+ + Q + Sbjct: 40 -----KNFPLAELQQAGYQVAFSGQKTYNGVAILSRQPIGDVQC------GIPGFEDEQK 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + ++ + V+ +++ + + S + Y + + W+ ++ Sbjct: 89 RVIAATID----GVRVVCVYVPNGQEVGSDKYQYK------LKWLAAITAWLKEELAKHP 138 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 + GD+N +D +K + F + + + Sbjct: 139 RLALLGDYNIAPEDRDVHDPVAWQGNVLVSAPERDAFKALLQLGLRDAFRLFEQAE-KSY 197 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ++ ID+ ++ S I D + +R SDH P+ Sbjct: 198 SWWDYRMMAFRRNMGLRIDHILISPALQ-----CSACHI----DKAPRKLERPSDHTPVV 248 Query: 300 ID 301 + Sbjct: 249 AE 250 >gi|293415066|ref|ZP_06657709.1| exodeoxyribonuclease III [Escherichia coli B185] gi|291432714|gb|EFF05693.1| exodeoxyribonuclease III [Escherichia coli B185] Length = 268 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKREN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + + F Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + ID + Q + ++ D ++ S Sbjct: 205 QTAERFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|153009683|ref|YP_001370898.1| exodeoxyribonuclease III Xth [Ochrobactrum anthropi ATCC 49188] gi|151561571|gb|ABS15069.1| exodeoxyribonuclease III Xth [Ochrobactrum anthropi ATCC 49188] Length = 260 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 82/303 (27%), Gaps = 67/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + L+ + K DI LQE+ S + Sbjct: 1 MKIATWNING----------------VKARIENLQHWLKESSPDIACLQEIKSVDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ K D +R Sbjct: 41 ------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEVNRGLPGDDGDEQARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + + + V+ ++L + +D+ + Y S Q L+ W + Sbjct: 92 --IEGVYSTDKGVVRVVSLYLPNGNPVDTEKFPYKLS------WMQRLELWAKDRLALEE 143 Query: 204 PFVIAGDFNRKINYLG---NNDDFWKTID-----------PNDSLIRFPKEKDSRCNANK 249 P V+AGD+N + N + Sbjct: 144 PLVLAGDYNVIPEPDDAKNPEQWVGDALFKPQSRQAFRRLENLGFTDAIRASTDDSGIYS 203 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A I + + ++ SDH P++I Sbjct: 204 FWDYQAGAWQKNNGIRIDHLMLSPEAANRFISSDVEKHV-------RAWEKPSDHVPVTI 256 Query: 301 DYD 303 Sbjct: 257 TLS 259 >gi|78066588|ref|YP_369357.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. 383] gi|77967333|gb|ABB08713.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. 383] Length = 284 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 79/307 (25%), Gaps = 52/307 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 +RL+ WNI + +G D + L D D++ LQE+ Sbjct: 1 MRLIDWNIQWGRDADGA-----------VDLPRTVAAIRALGDFDVLCLQEVTRGFGALP 49 Query: 75 --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + A++ A+ + L Sbjct: 50 GRPGADQFAELAALLPGYAIVEAIGADLPPIETGAPRRQFGNAIATRLPVGRVLRQLLPW 109 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 D+ + + R A+++ ++ + V+ HL+ + + ++A Sbjct: 110 PADAGAPSMPRIALDVELQAPFGPLRVVTTHLEYYSARQ--RLAQVDALRDRHREACAHA 167 Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + + PF ++ GDFN D + + Sbjct: 168 ARPAPAETAEGPFSATGQPCDAIVCGDFNSAFGSEAYRRFMEPIADAPRFVDAWVARHPG 227 Query: 244 RCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 R + D+ + + + R SDH Sbjct: 228 RTPPPTAGVYDTVQWSEGPLACDFVFVTDTLLPRVTRCEI-----------DGDVRASDH 276 Query: 296 CPISIDY 302 P+ ++ Sbjct: 277 QPVLLEL 283 >gi|269967644|ref|ZP_06181694.1| exodeoxyribonuclease III [Vibrio alginolyticus 40B] gi|269827731|gb|EEZ82015.1| exodeoxyribonuclease III [Vibrio alginolyticus 40B] Length = 268 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 84/309 (27%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K + Q G R Sbjct: 42 -------FPIEAVEAMGYKVYFHGQKAHYGVAMLCKQEPLHVQK----GFPTDNEEHQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+K+ VL+ F ++ Q + L ++ + Sbjct: 91 MIMATFLNENGEKVTVLN-----GYFPQGDNISHETKFPYKRQFYKDLMTYLNDHHNNDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ ++ K + + F K Sbjct: 146 QLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSFQPEEREWLKALLDWGFVDTFRKLYP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + + I+ D ++ S Sbjct: 206 EVNDQFSWFDYRSRGFDDNRGLRIDVILATPSLAEKCIESGI-------DYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|222106133|ref|YP_002546924.1| hypothetical protein Avi_5005 [Agrobacterium vitis S4] gi|221737312|gb|ACM38208.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 245 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 84/280 (30%), Gaps = 44/280 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 RL+++NI++ + D + + +ADIV LQE+ Sbjct: 5 FRLLTYNIHSCIGTDR-----------RLDPARIAEVIVATEADIVCLQEVDVGRNRTSG 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + Y T + HS + + A+ + + Q L R R Sbjct: 54 IDQADVIAGYLTMQSHFHSALNVA-EERYGDALLTRFPTRIVQQGMLPS------RGEQR 106 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKKES 201 A+ + V I + V H ++QA+ L +W+ E+ Sbjct: 107 GALLVEVSIGQIAVNVCVTHFGLRAG-------------ERAEQARALLGVEWLGPLLEA 153 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 P V+A D N ++ + + + +D+ + Sbjct: 154 DAPIVVAADLNA-VSNSKAFKLLTARLADATKANLKSDSLSRSKPTFPSRFPFLRLDHVL 212 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + + + D +R SDH P+ + Sbjct: 213 ISGGL---------NILEARVIDTP-LARRASDHLPLLVT 242 >gi|242243247|ref|ZP_04797692.1| Sphingomyelin phosphodiesterase [Staphylococcus epidermidis W23144] gi|242233196|gb|EES35508.1| Sphingomyelin phosphodiesterase [Staphylococcus epidermidis W23144] Length = 334 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 42/299 (14%), Positives = 99/299 (33%), Gaps = 33/299 (11%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++ + N+ L +++ N + +D Y + + D+V L E+ A Sbjct: 42 DSLKITTHNVYFLPT----AIYPNWGQSQRADLISKADYIQ--NQDVVILNELFDKKASK 95 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGA 133 ++ + Y T + ++ N + + K V Q+ + + Sbjct: 96 RLLARLHSQYPYQTPIVGKGTEGWQNTSGTYRKIKKVSGGVGIVSKWPIVQQEQH-IYKK 154 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 AGN+ + + NGK ++ HL++ + + Q +K Sbjct: 155 GCGADMAGNKGFAYIKINKNGKYHHIIGTHLQA----EDSTCFKGKDKDIRQSQMSEIKQ 210 Query: 194 WI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 +I + P I GD N I + ++ + ++N + Sbjct: 211 FIKDKNIPKNEPVYIGGDLNV-IKDSDEYEQMANNLNVSLPTQFDGNAYSWDTSSNSIAK 269 Query: 253 N------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPIS 299 +DY ++D++ + + + + + + + SDH P+S Sbjct: 270 YNYPKLEPQHLDYILLDRDHAQPSSWHNDTHRVKSPEWSVKSWGKTYKYNDYSDHYPLS 328 >gi|134096002|ref|YP_001101077.1| DNase [Herminiimonas arsenicoxydans] gi|133739905|emb|CAL62956.1| Putative endonuclease/exonuclease/phosphatase family protein [Herminiimonas arsenicoxydans] Length = 264 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 84/299 (28%), Gaps = 58/299 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+R+ ++NI+ G L+Q + +D++FLQE+ + + Sbjct: 2 KLRITTYNIHKGVSSFGA----------RPRIHALKQAINAMQSDVLFLQEVQGRHDLHA 51 Query: 83 VFPKNTW------CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + W + + H A+ + + S Sbjct: 52 LKHATDWPELSQQDFLAGDSHQCAYGMNAVYDHGHHGNALLSCFPILSSR-----NQNIS 106 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + +R + +V ++ IHL F +Q L + ++ Sbjct: 107 DHKYESRGILHCVVRAPEAEVHCFVIHLGLFAGS-------------RKRQTAALIEAVS 153 Query: 197 QKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ES P +IAGDFN N L + F + + Sbjct: 154 ASAESGAPIIIAGDFNDWGNRLSEELRDTLGVTEVFDANLSRRGFGTYLRQLSGRGTKIQ 213 Query: 249 KNLRNKIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + ES + + +LSDH PI + Sbjct: 214 PARTFPAAMPFLQLDRIYVRG-----FKVESAEVLH------GAMWGKLSDHAPIVANL 261 >gi|116329336|ref|YP_799056.1| sphingomyelinase C precursor [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330061|ref|YP_799779.1| sphingomyelinase C precursor [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|130088|sp|P17627|PHL_LEPIN RecName: Full=Sphingomyelinase C; AltName: Full=Sphingomyelin phosphodiesterase; Short=SMase; Flags: Precursor gi|44013|emb|CAA36424.1| unnamed protein product [Leptospira interrogans] gi|116122080|gb|ABJ80123.1| Sphingomyelinase C precursor [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123750|gb|ABJ75021.1| Sphingomyelinase C precursor [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 556 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 99/303 (32%), Gaps = 25/303 (8%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++ + +++++ N+ L + + W N + + + Y + + D++ Sbjct: 75 ILANSIPENMGIKILTHNVFLLPKT--LPGWGNWGQNERAQRIVSSNYIQ--NQDVIVFD 130 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVL 124 E +A + Y T+ + K + + K Sbjct: 131 EAFDTDARKILLDGVRSEYPYQTDVIGRTKKGWDATLGLYRTDAFTNGGVVIVSKWPIEE 190 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + + N+ + ++ NG+K ++ H+++ + + Sbjct: 191 KIQHVFKEKGCGADVFSNKGFAYVRIDKNGRKFHIIGTHVQAQDSGCA-----NLGVVSR 245 Query: 185 SQQAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDF--WKTIDPNDSLIRFPKEK 241 Q ++D+I +K +IAGD N + +P + F + Sbjct: 246 VNQFNEIRDFIDSKKIPKNEMVLIAGDLNVIKGSREYHQMLCILNVNNPKYVGVPFTWDT 305 Query: 242 DSRCNANKNLRN--KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---LSDHC 296 + A + +DY + ++ ++ I ++ + + ++G SDH Sbjct: 306 KTNEIAAFYYKKVEPAYLDYIFVSKSHFQPPIWQNLAYDPISAKTWTAKGYTSDEFSDHY 365 Query: 297 PIS 299 P+ Sbjct: 366 PVY 368 >gi|206560253|ref|YP_002231017.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia cenocepacia J2315] gi|198036294|emb|CAR52190.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia cenocepacia J2315] Length = 284 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 87/305 (28%), Gaps = 48/305 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 +RL+ WNI + +GV D + L D D++ LQE+ Sbjct: 1 MRLIDWNIQWGRDADGV-----------VDLPRTVAAIRELGDFDVLCLQEVTRGFDALP 49 Query: 75 --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + ++ + R A+ + L Sbjct: 50 GRPGPDQFGELAALLPGYTVVDAIGADLPAIRPGAPRRQFGNAIATRLPVGRVLRQSLPW 109 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF------LDSLENTYSPSCSLLSQ 186 D+ + + R A+++ ++ + V+ HL+ + +D+L + + +C+ + Sbjct: 110 PADAGAPSMPRVALDIELQAPFGPLRVVTTHLEYYSARQRLAQVDALRDRHREACAHATH 169 Query: 187 QAQW-LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 A+ + ++ GDFN D D + + R Sbjct: 170 PARAETAEGPFSATGQPRDAIVCGDFNSAFGSDAYRRFLAPLADAPDFIDAWVARHPGRT 229 Query: 246 NANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + D+ + + + R SDH P Sbjct: 230 PPPTAGVYDTVQWSDGPLACDFVFVTDTLLPRVTRCEI-----------DGNVRASDHQP 278 Query: 298 ISIDY 302 + +D Sbjct: 279 VLLDL 283 >gi|325145191|gb|EGC67473.1| exodeoxyribonuclease III [Neisseria meningitidis M01-240013] Length = 256 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 86/305 (28%), Gaps = 73/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + DI+ LQE Sbjct: 1 MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ +N + R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVN-----IGLPALPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V++++ + LDS + Y Q L +++ + Sbjct: 90 RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMARHG 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D +++ + Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWYEKIHCSTVERQWFQNLLDLGLTDSLRHIHPEGAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ L D +R SDH P++ Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDV-------RVDLDTRALERPSDHAPVT 251 Query: 300 IDYDF 304 ++D+ Sbjct: 252 AEFDW 256 >gi|323968517|gb|EGB63923.1| exodeoxyribonuclease III [Escherichia coli M863] gi|327252867|gb|EGE64521.1| exodeoxyribonuclease III [Escherichia coli STEC_7v] Length = 268 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 38/310 (12%), Positives = 79/310 (25%), Gaps = 75/310 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPDDGEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKREN 144 Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 P +I GD N + + I + F Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLIS-WGLVDTFRHAN 203 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID + Q ++ D ++ Sbjct: 204 PETADRFSWFDYRSKGFDDNRGLRIDLLLASQPLADCCVETGI-------DYEIRSMEKP 256 Query: 293 SDHCPISIDY 302 SDH P+ + Sbjct: 257 SDHAPVWATF 266 >gi|253565260|ref|ZP_04842715.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251945539|gb|EES85946.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 361 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 88/304 (28%), Gaps = 68/304 (22%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +++ ++N+++ ++ L Y K DI+ QE A Sbjct: 100 ANTLKIATYNVDSFGNEQSGYSC-----------KELAAYMKEHRVDIICFQEF----AG 144 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + F ++ ++ + + ++ +A+ K + +++ Sbjct: 145 NRYFTPDSIRNAFADWQYAVIP-QAPDSTPILQVALFSKYPVKDSRLITYPDSRNCS--- 200 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP--------------------- 179 + + ++G+ I V + HL++ + Sbjct: 201 -----MWCDLNVDGQTIRVFNNHLQTTEVSQNKRRLERELAKNELTGREEAVAKQLLEGL 255 Query: 180 --SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + + QA+ L+ I + P ++ GDFN + + + F Sbjct: 256 NENFRKRAAQAKTLEQLIRT---TPYPVLVCGDFNSLPSSYTYSTVKGDNLQDG-----F 307 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + + IDY + D SDH P Sbjct: 308 QTCGHGYMYTFRYFKRLLRIDYIFHSKEFK-------------GVDYYSPDLDLCSDHNP 354 Query: 298 ISID 301 + ++ Sbjct: 355 VVME 358 >gi|27466926|ref|NP_763563.1| truncated beta-hemplysin [Staphylococcus epidermidis ATCC 12228] gi|57865922|ref|YP_190085.1| beta-hemolysin [Staphylococcus epidermidis RP62A] gi|27314468|gb|AAO03605.1|AE016744_8 truncated beta-hemplysin [Staphylococcus epidermidis ATCC 12228] gi|57636580|gb|AAW53368.1| beta-hemolysin [Staphylococcus epidermidis RP62A] Length = 334 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 42/299 (14%), Positives = 98/299 (32%), Gaps = 33/299 (11%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++ + N+ L +++ N + +D Y + + D+V L E+ A Sbjct: 42 DSLKITTHNVYFLPT----AIYPNWGQSQRADLISKADYIQ--NQDVVILNELFDKKASK 95 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGA 133 ++ + Y T + ++ N + + K V Q+ + + Sbjct: 96 RLLTRLHSQYPYQTPIVGKGTEGWQNTSGTYRKIKKVSGGVGIVSKWPIVQQEQH-IYKK 154 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 AGN+ + + NGK ++ HL++ + + Q +K Sbjct: 155 GCGADMAGNKGFAYIKINKNGKYHHIIGTHLQA----EDPTCFKGKDKDIRQSQMSEIKQ 210 Query: 194 WI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 +I + P I GD N I ++ + ++N + Sbjct: 211 FIKDKNIPKNEPVYIGGDLNV-IKDSDEYQQMANNLNVSLPTQFDGNAYSWDTSSNSIAK 269 Query: 253 N------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPIS 299 +DY ++D++ + + + + + + + SDH P+S Sbjct: 270 YNYPKLEPQHLDYILLDRDHAQPSSWHNDTHRVKSPEWSVKSWGKTYKYNDYSDHYPLS 328 >gi|323497461|ref|ZP_08102479.1| hypothetical protein VISI1226_00690 [Vibrio sinaloensis DSM 21326] gi|323317544|gb|EGA70537.1| hypothetical protein VISI1226_00690 [Vibrio sinaloensis DSM 21326] Length = 316 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 102/311 (32%), Gaps = 29/311 (9%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + + N+ E + + + +LDADI+ LQE+ S Sbjct: 5 NTLTFATANLFNFVEPPSAFYDFENIYDAQGWADKCRWTAEKITSLDADIIGLQEVFSIE 64 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP--LLGAKDS 136 A K+F + + ++ T + A+A R + P L+ + Sbjct: 65 ATRKLFDQLGYR-YFVTVDEPHIESDYIYTKPIVALASRFPITHFEAVTPPCSLVQDYNV 123 Query: 137 FSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSC-------SLLSQQA 188 +R+ + +++ ++ V HLKS +S + +A Sbjct: 124 ECPRFSRQPIYAVIDAADIGQVAVYVCHLKSQRATESNNPESDNALLGVWLSSQQRGWEA 183 Query: 189 QWLKDWITQ-KKESLVPFVIAGDFNRKINYLGNN------DDFWKTIDPNDSLIRFPKEK 241 L+ ++ Q ++ +P + GD N+ I + DS + F + Sbjct: 184 VMLRHFMQQKYRDKPMPTALMGDMNQTILSDTTGMLVKDLKQLDNELKLEDSWLIFQESH 243 Query: 242 DS--RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKRLS 293 S R + + +DY ++ Q Y D S+ K+ S Sbjct: 244 PSAERAATHYHFARGNVLDYVLLSQEFQTHSSYSMADVSHYRVLDQHLINPNYSQDKQAS 303 Query: 294 DHCPISIDYDF 304 DH +++ F Sbjct: 304 DHAFVAVTVRF 314 >gi|289774208|ref|ZP_06533586.1| secreted protein [Streptomyces lividans TK24] gi|289704407|gb|EFD71836.1| secreted protein [Streptomyces lividans TK24] Length = 274 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 37/284 (13%), Positives = 80/284 (28%), Gaps = 56/284 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY------ 77 + ++++NI+ + V D + + AD+V LQE+ + Sbjct: 34 LDVMTFNIHHAQGTDDVL-----------DLRRVANVIRKSGADVVGLQEVDKHYSARSD 82 Query: 78 --NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + A++ + + + + + + A+ + + L + Sbjct: 83 WADQPAELAELLGYHVVFGANIDNSPPAPGGHRVQY-GTAILSRYPITASDNTWLYKSPG 141 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R + ++++GKK+ + HL + D QQ + D I Sbjct: 142 Q----EQRGLLHATLDVHGKKVEFYNTHLAAGSQAD------------RLQQTAQVVDLI 185 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 +K P ++ GDFN + + Sbjct: 186 GTRK----PGILVGDFNALPAAPES----QPLQNAYTDAWAKSLHARGDGATYPAQSPTE 237 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ID + + Q + SDH P+ Sbjct: 238 RIDLIYATRRVTPLVAQ------------VLKDDPAASDHRPLL 269 >gi|160875927|ref|YP_001555243.1| exonuclease III [Shewanella baltica OS195] gi|160861449|gb|ABX49983.1| exodeoxyribonuclease III [Shewanella baltica OS195] gi|315268120|gb|ADT94973.1| exodeoxyribonuclease III [Shewanella baltica OS678] Length = 270 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 80/309 (25%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L+ + DI+ LQE ++ Sbjct: 1 MKIVSFNINGL----------------RARLHQLQALIDSHQPDIIGLQETKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K Q G A R Sbjct: 42 -------FPLAEVEAMGYQVHYHGGKAHYGVAMLSKVAPEKLQK----GFPTDDEDAQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+ + V + F + + Q L ++ + Sbjct: 91 MIIGTFAQANGRPLTVFN-----GYFPQGESIDHPTKYPAKRKFYQDLMHYLQTNHSNDE 145 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 I GD N ++ KT+ + F + Sbjct: 146 DIAIIGDINISPTDLDIGIGEVNRKRWLKTGKCSFQPEEREWLKTLQDWGLVDTFRQLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 R + ID + + L++ + D + S Sbjct: 206 ERIERYSWFDYRSKGFDDNRGLRIDVILATPSLAARLVES-------DVDYDLRGIDKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|87198716|ref|YP_495973.1| endonuclease/exonuclease/phosphatase [Novosphingobium aromaticivorans DSM 12444] gi|87134397|gb|ABD25139.1| Endonuclease/exonuclease/phosphatase [Novosphingobium aromaticivorans DSM 12444] Length = 245 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 82/286 (28%), Gaps = 59/286 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+++ S+NI+ K D + + +DAD++ LQE + + Sbjct: 2 KLKVASYNIH-----------KGVGLDRRRDPDRILTVLREIDADVIALQEADRRFGLRE 50 Query: 83 VFPKNTWCIFYSTERLINHSKRD------SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 +S R++ D S A+ VR+ + + PL Sbjct: 51 AVIPRAMLDDHSPWRVVEPGHYDRARTSSSMGWHGNALLVRRDIEVIDACAVPLPTL--- 107 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R AV + + G + VL +HL S QQ + + I Sbjct: 108 ----EPRGAVCASLRLAGHVVRVLGMHLDL-------------SGLRRRQQIETICGHIE 150 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 E + GDFN G F + + + + R Sbjct: 151 DHPERGHAV-LMGDFNEWSPSGGALSAFADHLR-----------VLAPGRSFPSRRPVAQ 198 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D V+ + SDH P+ + Sbjct: 199 LDRIVVSDGL----------HVDAAGVHHSPLAAVGSDHLPVWAEL 234 >gi|114320344|ref|YP_742027.1| endonuclease/exonuclease/phosphatase [Alkalilimnicola ehrlichii MLHE-1] gi|114226738|gb|ABI56537.1| Endonuclease/exonuclease/phosphatase [Alkalilimnicola ehrlichii MLHE-1] Length = 575 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 90/311 (28%), Gaps = 34/311 (10%) Query: 15 PCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 P A + +R+ +N+ G ++ L LDADIV L Sbjct: 274 PAPPERAGEGLIRVAGFNVENYFLTLGERGADSARALDRQRARL-LPALAALDADIVGLV 332 Query: 73 EMGS-YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 EM + A+ + + R + +++I ++ R V + L Sbjct: 333 EMENDRAALEDLVAALNDHLGADRYRAAPGTPDTGSDEIKVSLIYRPDRVERVGGPLRDL 392 Query: 132 GAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSF-CFLDSLENTYSPSCSLLSQQA 188 R V+ G V +H K+ DS + C L +QA Sbjct: 393 EPVHH------RPPVKAAFRPAAGGAPFAVAVVHHKAKVGCPDSDDIDRGQGCWNLRRQA 446 Query: 189 --QWLKDWITQKKES---LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + L + I + +E +P +I GD N + + Sbjct: 447 QSEALLEAIGRWREDRADDLPVLIVGDVNAYGGEDPVR----ALLAGGKRDLLARHLPPE 502 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------------KR 291 R +D+ + + I +E + R Sbjct: 503 RRYTYVFRGESGYLDHALAPPRLADRVQAAGTWAINADEPRLLEYDARGIERRFRPGPWR 562 Query: 292 LSDHCPISIDY 302 SDH P+ +D Sbjct: 563 SSDHDPVWVDL 573 >gi|84393754|ref|ZP_00992502.1| exodeoxyribonuclease III [Vibrio splendidus 12B01] gi|84375616|gb|EAP92515.1| exodeoxyribonuclease III [Vibrio splendidus 12B01] Length = 268 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 80/309 (25%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQAIIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K V Q +D R Sbjct: 42 -------FPLADVEAMGYKVYFHGQKAHYGVAMLCKQEPVSVQKGFPTDNEDHQK----R 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+K+ VL+ F + + + L ++ Sbjct: 91 MIMATFEDENGEKVTVLN-----GYFPQGDNIKHETKYPYKREFYKDLMTYLNDYHNKDE 145 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ KT+ + F Sbjct: 146 QVIVMGDINISPTDIDIGIGEPNAKRWLKTGKCSFQPEEREWLKTLMDWGFVDSFRLLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + D ++ S Sbjct: 206 EVNDQYSWFDYRSKGFVDNRGLRIDVVLATQKLADKCTEAGI-------DYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|21218691|ref|NP_624470.1| secreted protein [Streptomyces coelicolor A3(2)] gi|5708245|emb|CAB52358.1| putative secreted protein [Streptomyces coelicolor A3(2)] Length = 279 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 37/284 (13%), Positives = 80/284 (28%), Gaps = 56/284 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY------ 77 + ++++NI+ + V D + + AD+V LQE+ + Sbjct: 39 LDVMTFNIHHAQGTDDVL-----------DLRRVANVIRKSGADVVGLQEVDKHYSARSD 87 Query: 78 --NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + A++ + + + + + + A+ + + L + Sbjct: 88 WADQPAELAELLGYHVVFGANIDNSPPAPGGHRVQY-GTAILSRYPITASDNTWLYKSPG 146 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R + ++++GKK+ + HL + D QQ + D I Sbjct: 147 Q----EQRGLLHATLDVHGKKVEFYNTHLAAGSQAD------------RLQQTAQVVDLI 190 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 +K P ++ GDFN + + Sbjct: 191 GTRK----PGILVGDFNALPAAPESRPLQ----NAYTDAWAKSLHARGDGATYPAQSPTE 242 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ID + + Q + SDH P+ Sbjct: 243 RIDLIYATRRVTPLVAQ------------VLKDDPAASDHRPLL 274 >gi|126174923|ref|YP_001051072.1| exonuclease III [Shewanella baltica OS155] gi|153001253|ref|YP_001366934.1| exonuclease III [Shewanella baltica OS185] gi|217972826|ref|YP_002357577.1| exonuclease III [Shewanella baltica OS223] gi|125998128|gb|ABN62203.1| Exodeoxyribonuclease III [Shewanella baltica OS155] gi|151365871|gb|ABS08871.1| exodeoxyribonuclease III [Shewanella baltica OS185] gi|217497961|gb|ACK46154.1| exodeoxyribonuclease III [Shewanella baltica OS223] Length = 270 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 80/309 (25%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L+ + DI+ LQE ++ Sbjct: 1 MKIVSFNINGL----------------RARLHQLQALIDSHQPDIIGLQETKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K Q G A R Sbjct: 42 -------FPLADVEAMGYQVHYHGGKAHYGVAMLSKVAPEKLQK----GFPTDDEDAQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+ + V + F + + Q L ++ + Sbjct: 91 MIIGTFAQANGRPLTVFN-----GYFPQGESIDHPTKYPAKRKFYQDLMHYLQTNHSNDE 145 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 I GD N ++ KT+ + F + Sbjct: 146 DIAIIGDINISPTDLDIGIGEVNRKRWLKTGKCSFQPEEREWLKTLQDWGLVDTFRQLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 R + ID + + L++ + D + S Sbjct: 206 ERIERYSWFDYRSKGFDDNRGLRIDVILATPSLAARLVES-------DVDYDLRGIDKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|239817089|ref|YP_002945999.1| endonuclease/exonuclease/phosphatase [Variovorax paradoxus S110] gi|239803666|gb|ACS20733.1| Endonuclease/exonuclease/phosphatase [Variovorax paradoxus S110] Length = 250 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 83/288 (28%), Gaps = 51/288 (17%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +R+ ++NI+ + + L + LDADIV LQE+ N Sbjct: 5 AYNLRVATYNIH--------KGVQGIGLARRLEIHNLGHAIEQLDADIVCLQEVRKMN-R 55 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSN------NDIHTAIAVRKKNVRVLQQSYPLLGAK 134 W + L A+ + + + Sbjct: 56 QAALRFERWPELPQADFLAPEGYTAVYETNAITRHGEHGNALLTRWPVIRTGHQDI---- 111 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 S R R + +++E+ G+ + + +HL +Q L+++ Sbjct: 112 -SDHRFEQRGLLHVVIEVEGRPVHAIVVHLGLIKGS-------------RVRQVARLREF 157 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 I ++ V+AGDFN + L + R + Sbjct: 158 IEREVPPGEAVVVAGDFNDWGAR-------MRYAMNAMGLRDTSDLRGPRTLTYPSRLPV 210 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D+ + S R+SDH P+ D+ Sbjct: 211 AQLDFVY---GRELEPVACSVPRGPI--------WARMSDHLPLVADF 247 >gi|52840886|ref|YP_094685.1| hypothetical protein lpg0649 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627997|gb|AAU26738.1| exodeoxyribonuclease III [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 263 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 83/305 (27%), Gaps = 76/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +L SWN+N+L + Q+ ++ D++ +QE + Sbjct: 9 FKLASWNVNSL----------------KVRLEQVLQWLESSQVDVLAMQETKLTDD---- 48 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + S + +A+ + + R Sbjct: 49 ------NFPVASFIDKGYHVIFSGQKTYNGVAIISRYPMT------DIQTDIPELEDPQR 96 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V K I ++++++ + L S + Y + +I + Sbjct: 97 RILAATV----KGIRLINLYVPNGGELTSDKYQYKLD------WLNKVTRFIQHEISIYS 146 Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + GDFN F K ++ L + A Sbjct: 147 KVAVVGDFNIAPEDRDVYDPVEWEGCVLVSPPERQAFMKILELG--LHDSFRNFAQEEKA 204 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ Q D + +R SDH P+ Sbjct: 205 FSWWDYRAAAFRRNRGLRIDHVLLSHELNALCRQS-------KIDKEPRKAERPSDHAPV 257 Query: 299 SIDYD 303 ++ + Sbjct: 258 WVELE 262 >gi|60681531|ref|YP_211675.1| putative transmembrane endonuclease/exonuclease/phosphatase family protein [Bacteroides fragilis NCTC 9343] gi|60492965|emb|CAH07743.1| putative transmembrane endonuclease/exonuclease/phosphatase family protein [Bacteroides fragilis NCTC 9343] Length = 361 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 89/304 (29%), Gaps = 68/304 (22%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +++ ++N+++ ++ + Y K DI+ QE A Sbjct: 100 ANTLKIATYNVDSFGNEQSGYSC-----------KEIAAYMKEHRVDIICFQEF----AG 144 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + F ++ ++ + + ++ +A+ K + +++ Sbjct: 145 NRYFTPDSIRNAFADWQYAVIP-QAPDSTPILQVALFSKYPVKDSRLITYPDSRNCS--- 200 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP--------------------- 179 + +++NG+ + V + HL++ + Sbjct: 201 -----MWCDLDVNGQTVRVFNNHLQTTEVSQNKRRLERELAKNELTGREEAVARQLLEGL 255 Query: 180 --SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + + QA+ L+ I + P ++ GDFN + + + F Sbjct: 256 NENFRKRAAQAKTLEQLIRT---TPYPILVCGDFNSLPSSYTYSTVKGDNLQDG-----F 307 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + + IDY + D SDH P Sbjct: 308 QTCGHGYMYTFRYFKRLLRIDYIFHSKEFK-------------GVDYYSPDLNLCSDHNP 354 Query: 298 ISID 301 + ++ Sbjct: 355 VVME 358 >gi|332883625|gb|EGK03906.1| hypothetical protein HMPREF9456_01447 [Dysgonomonas mossii DSM 22836] Length = 285 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 38/298 (12%), Positives = 84/298 (28%), Gaps = 37/298 (12%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + + ++ ++++NI + + +S+ + + D DI+ +Q Sbjct: 14 FISSCKTKPLELNVMTFNIR-------LDVPSDSLNSWQYRKDNAAEMVRMNDVDILGMQ 66 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ + S ++ P L Sbjct: 67 EVLLNQMNDLKERLPQYTAIGVGREDGADKGEFSPIFYKKDRFSAIESGTFWVSETPELA 126 Query: 133 AKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + + R A ++ + GK+I+ ++ HL + +LL ++A+ Sbjct: 127 GSKGWDASYIRVATWAILKEKATGKEIFAINTHL-----DNDGSIARKEGGNLLLKKAEE 181 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRFPKEKDSRCN 246 L +P V+ GDFN + + + ++ D + Sbjct: 182 L--------GKGLPIVLTGDFNDTPQSEAIKNITDASKTNHLLDSKTIALKTSGTDWTFH 233 Query: 247 ANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 L IDY + + Y G +SDH + Sbjct: 234 NFGRLAESERPLIDYIFVSKQ---------IKVQDYAVLPDTLNGTFVSDHKAVLSKL 282 >gi|17987376|ref|NP_540010.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M] gi|17983063|gb|AAL52274.1| exodeoxyribonuclease iii [Brucella melitensis bv. 1 str. 16M] Length = 296 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 91/315 (28%), Gaps = 69/315 (21%) Query: 13 LVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 +PC A +++ +WNIN + L+ + + DIV Sbjct: 24 CLPCPARAHNHYGMKIATWNING----------------VKARIDNLQHWLRESSPDIVC 67 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 LQE+ S + + + +A+ K Sbjct: 68 LQEIKSVDE----------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLP 117 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 D +R +E + + + V+ ++L + +D+ + Y S Q Sbjct: 118 GDDSDEQARF-----IEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQR 166 Query: 191 LKDWITQKKESLVPFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIR 236 L++W ++ P V+AGD+N + + N Sbjct: 167 LENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTD 226 Query: 237 FPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + + ID+ ++ A I + + + Sbjct: 227 AIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------R 279 Query: 288 RGKRLSDHCPISIDY 302 ++ SDH P+++ Sbjct: 280 AWEKPSDHVPVTVTL 294 >gi|464373|sp|P33377|PHL3_BACCE RecName: Full=Sphingomyelinase C; Short=SMase; AltName: Full=Cereolysin B; AltName: Full=SMPLC; AltName: Full=Sphingomyelin phosphodiesterase; Flags: Precursor gi|142674|gb|AAA91820.1| cerB [Bacillus cereus] Length = 333 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 94/272 (34%), Gaps = 31/272 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLFGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + ++D+I + + +I GD N N +KT++ + Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGHTA 257 Query: 241 KD-SRCNANKNLRNK----IPIDYFVMDQNAY 267 + N+ +DY + ++ Sbjct: 258 TWDATTNSIAKYNFPDSLAEYLDYIIASKDHA 289 >gi|294635923|ref|ZP_06714368.1| exodeoxyribonuclease III [Edwardsiella tarda ATCC 23685] gi|291090755|gb|EFE23316.1| exodeoxyribonuclease III [Edwardsiella tarda ATCC 23685] Length = 269 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 83/310 (26%), Gaps = 73/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +S+NIN L + L + + D++ LQE ++ + Sbjct: 1 MKFISFNINGL----------------RARPHQLAAIVEKHNPDVIGLQETKVHDDM--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ + + + A+D+ R Sbjct: 42 -------FPLQDLAPLGYHLHYHGQKGHYGVALLTRMAPLAVRKGFPGDAEDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + S+ L+D++ Q Sbjct: 90 RIIMADIPTEQGVLTVIN-----GYFPQGESRDHPLKFPAKSKFYADLQDYLQQSLTPQD 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 +I GD N L + + + + + Sbjct: 145 QVLIMGDMNISPADIDIGIGDESRRRWLRSGKCSFLPEERAWMDRLLSWGLVDTYRQAHP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 R + + ID + Q + + D ++ S Sbjct: 205 ERDDRFSWFDYRSKGFDDNRGLRIDLLLASQPLAQRCVDSGI-------DYEIRAMEKPS 257 Query: 294 DHCPISIDYD 303 DH PI ++ Sbjct: 258 DHAPIWAEFT 267 >gi|254431951|ref|ZP_05045654.1| exodeoxyribonuclease III [Cyanobium sp. PCC 7001] gi|197626404|gb|EDY38963.1| exodeoxyribonuclease III [Cyanobium sp. PCC 7001] Length = 278 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 92/307 (29%), Gaps = 69/307 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL SWN+N + + + + +++ LQE ++ Sbjct: 1 MRLASWNVN----------------SVRTRLEQVTTWLEQERPEVLCLQE---TKVADEL 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ---SYPLLGAKDSFSRA 140 FP + + ++ S + +A+ + L G ++ + Sbjct: 42 FPHDAFQEL-------GYATAISGQKAYNGVAILSLLPLEDVRIGFEALLPGDAEAQELS 94 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +R + LV+ + VL++++ + L S + Y Q L+ ++ ++E Sbjct: 95 TQKRVISALVD----GVRVLNLYVPNGSALRSEKYAYK------LQWLACLRRYLAVQEE 144 Query: 201 SLVPFVIAGDFNRKINYLGNND------------DFWKTIDP--NDSLIRFPKEKDSRCN 246 P + GDFN +D + + D L + + Sbjct: 145 QGDPLCMLGDFNIGPEDRDLHDPDRLTGGIMASEAERQALREALGDRLTDAFRLFEPEAG 204 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ + + + SDH P Sbjct: 205 HWSWWDYRTGAWDRDRGWRIDHIYLCDTLAACATGCRIHKHT-------RGNVQPSDHAP 257 Query: 298 ISIDYDF 304 + ++ + Sbjct: 258 VVVNLAW 264 >gi|331683257|ref|ZP_08383858.1| exodeoxyribonuclease III [Escherichia coli H299] gi|331079472|gb|EGI50669.1| exodeoxyribonuclease III [Escherichia coli H299] Length = 268 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 82/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALMTKETPIAVRR-----GFPGDDEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKREN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + + F Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + ++ D ++ S Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|284034261|ref|YP_003384192.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283813554|gb|ADB35393.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 252 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 87/281 (30%), Gaps = 36/281 (12%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++R+ ++NI S Q+G + W + + LDA++V LQE+ Sbjct: 4 QLRVATFNIRNSSAQDGDNSWPVRREVAVAAIA-------ALDAEVVGLQEVLPDQLADL 56 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 W I + + S + + + + P + Sbjct: 57 RTAYPDWTIVGAGRDDGVAAGEHSVVMVRPGDWSVESDETRWLSADPATPGSVGWDAELT 116 Query: 143 RRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R A + + ++G ++ VL+ H E S LL + A E Sbjct: 117 RIATLVRLRHVSGVRVGVLNTHY-----DHVGELAQVESSRLLDRWAAA---------EP 162 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 P+V+ GDFN + + + P + + ID+ + Sbjct: 163 DRPWVLLGDFNAEPGSPP-----LQVLTEAGWTDAIPAAAGGTWHDFTGATDGQRIDHIL 217 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + + + + SDH P++ Sbjct: 218 VSK---------PWQVVEAAVSYHRPANRLPSDHWPVAATL 249 >gi|149923487|ref|ZP_01911890.1| hypothetical protein PPSIR1_41059 [Plesiocystis pacifica SIR-1] gi|149815678|gb|EDM75207.1| hypothetical protein PPSIR1_41059 [Plesiocystis pacifica SIR-1] Length = 343 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 52/316 (16%), Positives = 86/316 (27%), Gaps = 42/316 (13%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 YVL + L A+ +R+VSWN+ D LRQ + + Sbjct: 42 YVLDPIGSLDSPPPRDAEHLRVVSWNLENFRGDP-----------EDHDLERLRQTIEAV 90 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 D DI+ +QE+ A+A + P I SK +A R+ V ++ Sbjct: 91 DPDILAVQEIKDPEALAALLPG----------WGIALSKGGGRGHQKLGVAWRRDRVELV 140 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q ++ R A + Sbjct: 141 GQPV---EHRELTLSGRVRPAFSAYFRDAARSSASEASPPLDLWVTVVHLKAMPTGHEDR 197 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----YLGNNDDFWKTIDPNDSLIRFPKE 240 + Q L + + + V+ GDFN + + + P D E Sbjct: 198 TTQWPALVEAVRGLSKRDPDHVVLGDFNSTGAPGEGTATEHAELDAALRPADLRRLPNSE 257 Query: 241 KDSRCNANKNLRNK---IPIDYFVMDQ-----------NAYKFLIQESFSEILYNEDDIK 286 S ID + ++ + E + Sbjct: 258 GCSAYYDGARRDAWKEASEIDLVWVRGLEGALGADPAVHSGTHCAAHHCRDFRSTEAYPE 317 Query: 287 SRGKRLSDHCPISIDY 302 LSDHCP+ +D Sbjct: 318 PDYSFLSDHCPVILDL 333 >gi|126735134|ref|ZP_01750880.1| Endonuclease/exonuclease/phosphatase [Roseobacter sp. CCS2] gi|126715689|gb|EBA12554.1| Endonuclease/exonuclease/phosphatase [Roseobacter sp. CCS2] Length = 332 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 91/331 (27%), Gaps = 51/331 (15%) Query: 24 VRLVSWNINTLS----EQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEMG 75 +R+ ++N+ + + + R L LDAD+V + E Sbjct: 1 MRIATYNVEWFNSLFDNTGALIDDDSWSSRWDVTKAQQTAGLGVVFGALDADVVMIIEAP 60 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + R +N+ + + +V Sbjct: 61 DTSPHRDARKALAHFAARFDLRAREAVTGFTNDTQQEIVLLYDPDVLDAVHDPQNAADAP 120 Query: 136 SFSRAG---------------NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY--S 178 F ++ +E+ + + ++ +H KS + + Sbjct: 121 QFDGQFHMDVDVDAHPDPITWSKPPLEIALTTGSGPVRLIGVHAKSKAPHGARNDAEATR 180 Query: 179 PSCSLLSQQAQW---LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--------- 226 S +Q L+ + Q + ++ GDFN F + Sbjct: 181 ISIQNRRKQLAQCVWLRKRVEQHLAAGEHLIVLGDFNDGPGLDEYEKLFGRSGIEIVLGE 240 Query: 227 -----TIDPNDSLIRFPKEKDSRCNANKN----LRNKIPIDYFVMDQNAYK----FLIQE 273 DP+ ++ + S A + +DY ++ Q + + I Sbjct: 241 GAEEQLFDPHAQMVLSRRFGASPSTARFKRKGEPYLQALLDYVMVSQGLRQKAPIWQIWH 300 Query: 274 SFSEILYNEDDIKSRG-KRLSDHCPISIDYD 303 F D + G SDH P+ +D D Sbjct: 301 PFDHPACYADVVLRDGLLAASDHFPVVLDID 331 >gi|218246518|ref|YP_002371889.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 8801] gi|218166996|gb|ACK65733.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 8801] Length = 1148 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 42/320 (13%), Positives = 85/320 (26%), Gaps = 37/320 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWK----NSVKRTTSDYTLLRQYAKNLDADIVFL 71 V +++ ++N+ + +S L +DADI L Sbjct: 701 TPPDVGGSLKVANFNVLNYFTTIDDASNDARGADSSSEFQRQQDKLVTALLGIDADIFGL 760 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNV-RVLQQSYP 129 E+ + +A N + + D I + + V V + Sbjct: 761 VELENNGDIAISNLVNVLNSETAPGTYDYIATGTIGTDAIKVGLIYKTSAVNPVGNYAIL 820 Query: 130 LLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCS----- 182 +F NR + + G+K+ V H KS Sbjct: 821 DSSVDPTFQDNLNRPVLAQTFQQIDTGEKVTVAVNHFKSKGTSGLTNTNDPNYDQGDGQG 880 Query: 183 ----LLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + A L +W+ + ++I GD N I Sbjct: 881 FWNATRTDAANALVNWLATDPTNSGDSDYLIIGDLNSYAMEDPI-----TAIKNAGYTNL 935 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------- 289 + + + +D+ + + + + + I +E ++ Sbjct: 936 IEQFSGADAYSYVFDGQFGYLDHALSNSSLTSQVTGVAEWHINADEPNVFDYNEEFNPPS 995 Query: 290 ------KRLSDHCPISIDYD 303 R SDH P+ I + Sbjct: 996 LYSVDPYRTSDHDPVIIGLN 1015 >gi|311262545|ref|XP_003129235.1| PREDICTED: nocturnin-like [Sus scrofa] Length = 427 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 37/297 (12%), Positives = 84/297 (28%), Gaps = 20/297 (6%) Query: 18 ASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 S +R++ WNI L E ++ + L+ + DI+ LQE+ Sbjct: 137 PSSHPPIRVMQWNILAQALGEGKDNFVQCPLEALKWEERKCLILEEILAYQPDILCLQEV 196 Query: 75 GSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 Y + + + + + + +N A+ + +++ + L Sbjct: 197 DHYFDTFHPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLT 256 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 A + A+ +E + + C L+ Sbjct: 257 AMTLKTNQ---VAIAQTLECRASRRQFCIAVTHLKARTGWERFRSAQGC-------DLLQ 306 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + + + +P +I GDFN + +++ + + + S Sbjct: 307 NLQNITQGAKIPLIICGDFNAEPTEEVYKHFASSSLNLSSAYKLLSADGQSEPPYTTWKI 366 Query: 253 N-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +DY + A + SDH + D+ F Sbjct: 367 RTSGECRHTLDYIWYSRQALSVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 423 >gi|315498220|ref|YP_004087024.1| endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB 48] gi|315416232|gb|ADU12873.1| Endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB 48] Length = 275 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 80/287 (27%), Gaps = 34/287 (11%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 A+ +RL+S+NI + Q+ + L D++ +QE Sbjct: 18 SAEPLRLMSYNIRYANPQDVPP--------WPERGPRMAAQIAFLAPDVLGVQEALLPMV 69 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + S + + P +KD+ + Sbjct: 70 DDLSQALGDYDHYGVGRDDGAKSGESTTVFWRRDRFEKVSATTQWCGQTPDTPSKDADA- 128 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 A R L + + + V D+ F D + +C++ ++ Sbjct: 129 AFPRTITRL-ILKDKRSGQVFDVRNAHF---DHVGVKARENCAV---------QILSLPP 175 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKT--IDPNDSLIRFPKEKDSRCNANKNLRNK-IP 256 ++ GDFN + +T + + N + Sbjct: 176 VPGAHLIVLGDFNTGMGSAPYKRFTAETSPLKDSRVASTRRFGPTGTFNGFDIRQTDGEA 235 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID+ +D+ + GK +SDH PI D + Sbjct: 236 IDHIFVDRTLM---------VKSFATLTDSYSGKVISDHFPIVADIE 273 >gi|320535908|ref|ZP_08035979.1| endonuclease/exonuclease/phosphatase family protein [Treponema phagedenis F0421] gi|320147245|gb|EFW38790.1| endonuclease/exonuclease/phosphatase family protein [Treponema phagedenis F0421] Length = 255 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 39/281 (13%), Positives = 83/281 (29%), Gaps = 33/281 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V++NI + +G + + + + + DI+ QE+ + + Sbjct: 1 MKIVTFNIRYDNPDDGKNAFIHRKS-------NIIEAINAHKPDIIGFQEVLPHVSAWLK 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + L + + G++ + R Sbjct: 54 EQFPEYYFIGHGRSENFSDEHIVLGYKKMDYQLHHFRTFWLSPTPQVPGSRYTEQSICPR 113 Query: 144 RAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + + E + + V + HL + Q + I + Sbjct: 114 ICIHAIFETDRHRLFSVYNTHL------------DHEGVDARVKALQQIMQDIDSFSKPT 161 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--KIPIDYF 260 +P V+ GDFN K + I ND ++ + + N IDY Sbjct: 162 LPTVLMGDFNAKPTDEELHVLKEFKIKENDKNLQLNDLTKDIRGSFHDFGNCTPEKIDYI 221 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 L S E ++ LSDH P+ ++ Sbjct: 222 FATPEFL--LQNYSVWE---------NKAGFLSDHYPLEVE 251 >gi|34541082|ref|NP_905561.1| AP endonuclease domain-containing protein [Porphyromonas gingivalis W83] gi|34397397|gb|AAQ66460.1| AP endonuclease domain protein [Porphyromonas gingivalis W83] Length = 310 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 91/301 (30%), Gaps = 45/301 (14%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-MG 75 ++ +++++++N+ + S N + +Y K ADIV LQE + Sbjct: 41 SSIPQSRIKVMTYNVKGFDFRAHNSENPNP----------ILKYIKGSGADIVCLQEAVL 90 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 S + ++ T+ + R + S + + + + K + P A + Sbjct: 91 SRKSNSRYVGLRTFKKYLPEYRYMELSHAREDRKG-SGLMLLSKYPILDVHRIPYESAFN 149 Query: 136 SFS----RAGNRRAVELL--------VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + R+ + + +G + + ++ + P+ +L Sbjct: 150 GSTAYTVDIQGRKVLVVNNHLESFRLTMADGTEYLKMVREGEAAALSRMMTAKMGPAYAL 209 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + QA + +I ++ GDFN + + + Sbjct: 210 RAVQADSVSHYIRC--SESEHVIVCGDFNDTPISYARHKI------ASGLKDAYSDTGRG 261 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K+ ID+ + + + + SDH P+ Sbjct: 262 PGFTFNQGAFKVRIDHILYSSGFLAY-------------NCTVDKSVHASDHFPVWCYLV 308 Query: 304 F 304 F Sbjct: 309 F 309 >gi|121603898|ref|YP_981227.1| endonuclease/exonuclease/phosphatase [Polaromonas naphthalenivorans CJ2] gi|120592867|gb|ABM36306.1| Endonuclease/exonuclease/phosphatase [Polaromonas naphthalenivorans CJ2] Length = 375 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 35/272 (12%), Positives = 85/272 (31%), Gaps = 26/272 (9%) Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW------CIFYSTERLINHSK 103 + L+AD++ + E + ++F + + ++ + Sbjct: 111 NEVATQNTARVIATLNADVLGVMEAEDRTTL-RLFNEQVLGETSIDHLLFNAYHHVMLVD 169 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV-EINGKKIWVLDI 162 + + I + R+ + +S+ + D+ +R E + +GK++WVL Sbjct: 170 GNDDRGIDVGLLTRRDYPVLSIRSH--VHDADAQGLIFSRDCAEYQLGLPSGKRLWVLLN 227 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL-VPFVIAGDFNRKINYLGNN 221 H KS + + + +QA +++ V+ GD N N Sbjct: 228 HFKSK-----GYGEQAANNAKRKRQAARVREIYDAHLAEGDEWLVMMGDLNEVPGNAPLN 282 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS----- 276 + D + R + N DY ++ + + Sbjct: 283 PLLREGSSLRDVAGHPQYDNGGRPGTHGNCTASGKFDYILLSPGLFDKVKAAGVERRGMW 342 Query: 277 -----EILYNEDDIKSRGKRLSDHCPISIDYD 303 + + ++ + SDH + ++ D Sbjct: 343 GGTNGTLWPHFKEVTRAEEAASDHAAVWVELD 374 >gi|259908294|ref|YP_002648650.1| Exodeoxyribonuclease III [Erwinia pyrifoliae Ep1/96] gi|224963916|emb|CAX55420.1| Exodeoxyribonuclease III [Erwinia pyrifoliae Ep1/96] Length = 268 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 82/311 (26%), Gaps = 75/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L+ + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLQAIVEQHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + H +A+ K V + +D+ R Sbjct: 42 FP-------LEEVASLGYHVFCHGQKGHYGVALLCKQQPVAVRRGFAGDNEDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + + + L+ ++ Q++++ Sbjct: 90 RIIMADILTPAGPLTVIN-----GYFPQGESRDHPTKFPAKEKFYRDLQSYLEQQQKADN 144 Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 +I GD N + + ++ + Sbjct: 145 QLLIMGDMNISSSDLDIGIGEESRKRWLRTGKCSFLPEEREWMSTLMNWGLYDTWRTQNA 204 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID + + + D ++ Sbjct: 205 TVN-DRFSWFDYRSKGFDDNRGLRIDLILASRPLADRCVATGI-------DYDIRAMEKP 256 Query: 293 SDHCPISIDYD 303 SDH PI ++ Sbjct: 257 SDHAPIWAEFS 267 >gi|212704397|ref|ZP_03312525.1| hypothetical protein DESPIG_02452 [Desulfovibrio piger ATCC 29098] gi|212672118|gb|EEB32601.1| hypothetical protein DESPIG_02452 [Desulfovibrio piger ATCC 29098] Length = 269 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 80/310 (25%), Gaps = 72/310 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +RLVSWN+N L W ++ D++ LQE K Sbjct: 2 SIRLVSWNVNGLRAVSAKPEW---------------RWFAENTCDVIGLQE-------TK 39 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 P+ S E H ++ +AV + + + + Sbjct: 40 AMPEQLKPEVASPEGWEAHWASSVVKKGYSGVAVFSRIKPLAVR----CELPQPEWQGEG 95 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCF-----LDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R + + +K + + + + + Sbjct: 96 RI-----LHLEFEKFHFFNGYFPNGGAEELDENGKPIPGRFKRVPYKMGFFDAFTAYAEE 150 Query: 198 KKESLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++S P V+ GDFN +L F + F Sbjct: 151 CRKSK-PIVVCGDFNIAHKAIDLARPKQNEKNTGFLPEERAFLDRFTAMGYVDTFRHVHG 209 Query: 243 SRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 K IDYF + + ++ + +Y S Sbjct: 210 DVEGRYSWWSYKMRAREKNVGWRIDYFFVSEELKPYIRDAWIEDDVY-----------GS 258 Query: 294 DHCPISIDYD 303 DHCP+ ++ D Sbjct: 259 DHCPVGLELD 268 >gi|254228998|ref|ZP_04922419.1| exodeoxyribonuclease III [Vibrio sp. Ex25] gi|262394738|ref|YP_003286592.1| exodeoxyribonuclease III [Vibrio sp. Ex25] gi|151938466|gb|EDN57303.1| exodeoxyribonuclease III [Vibrio sp. Ex25] gi|262338332|gb|ACY52127.1| exodeoxyribonuclease III [Vibrio sp. Ex25] Length = 268 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 83/309 (26%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K + Q G R Sbjct: 42 -------FPIEAVEAMGYKVYFHGQKAHYGVAMLCKQEPLHVQK----GFPTDNEEHQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+K+ VL+ F ++ Q + L ++ S Sbjct: 91 MIMATFLNENGEKVTVLN-----GYFPQGDNISHETKFPYKRQFYKDLMTYLNDHHNSDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ ++ KT+ F K Sbjct: 146 QLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSFQPEEREWLKTLLDWGFEDTFRKLYP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + + I D ++ S Sbjct: 206 EVNDQFSWFDYRSRGFDDNRGLRIDVILATPSLAQKCIDSGI-------DYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|90579330|ref|ZP_01235140.1| putative exodeoxyribonuclease III [Vibrio angustum S14] gi|90440163|gb|EAS65344.1| putative exodeoxyribonuclease III [Vibrio angustum S14] Length = 268 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 36/306 (11%), Positives = 87/306 (28%), Gaps = 72/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ + D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQALIEKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K + Q +D+ R Sbjct: 42 -------FPLADVEAMGYKVYFHGQKAHYGVAMLCKQEPISVQKGFPTDDEDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + K +I + + F + + L +++ + Sbjct: 90 RMIMTTFKQDNGK----NITVMNGYFPQGDNIKHETKFPAKEKFYADLMNYLNTAHTNDE 145 Query: 204 PFVIAGDFNRKINYLGN---------------------NDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N L ++ +T+ + F + Sbjct: 146 ELIVMGDINISPTDLDIGIGPANAKRWLKTGKCSFQPVEREWLQTLLDWGFVDTFRQLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + + ID + + + I+ + D ++ S Sbjct: 206 TVDDKYSWFDYRSKGFVDNRGLRIDVILATPSLAERCIES-------DIDYELRGIEKPS 258 Query: 294 DHCPIS 299 DH PI Sbjct: 259 DHAPIW 264 >gi|117919355|ref|YP_868547.1| endonuclease/exonuclease/phosphatase [Shewanella sp. ANA-3] gi|117611687|gb|ABK47141.1| Endonuclease/exonuclease/phosphatase [Shewanella sp. ANA-3] Length = 870 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 46/378 (12%), Positives = 101/378 (26%), Gaps = 88/378 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQ----EGVSLWKNSVKRTTS----DYTLLRQYAKNLDA 66 + + +R+ S+N+ + N T + ++A Sbjct: 455 APSVATKGDIRVASFNVLNFFNDVVGGDTNPSGSNRGALTEEEMLLQRAKIVSAITAMNA 514 Query: 67 DIVFLQEMGSYNAVAKVF-------------PKNTWCIFYSTERLINHSKRDSNNDIHTA 113 DIV L E+ + K N + T+ K ++ I Sbjct: 515 DIVGLMEIANNGFGEKSAIKNLVDALNEKQTADNAYSFVEITDEDKYDGKYFGSDAITVG 574 Query: 114 IAVRKKNVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155 + R V + + ++ + + A R ++ +I+ + Sbjct: 575 MLYRAGKVSLAGAARAIDTPEQHATAGSVTRTKDGKTETNPGNDAYQRHSLAQTFKIHDE 634 Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES--- 201 + V+ HLKS + + A+ L + + K Sbjct: 635 NLTVVVNHLKSKGSGCLEDWVNFEESVDPADQQGKCNAFRVSAAKVLGEALKDVKGDLLV 694 Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPK 239 P + D++ + W T+D + K Sbjct: 695 IGDMNAYGMEDPIRVLTDYDASKSERDIMTASWTTLDGKVFERQGSKIEKGYGLINLNTK 754 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291 + + +D+ + + + K L+ I E ++ GK+ Sbjct: 755 AHGAGTYSYSYNGELGNLDHALANTSLAKRLVDIEDWHINSVESNLFEYGKKFSGELAKS 814 Query: 292 -----LSDHCPISIDYDF 304 SDH P+ + + Sbjct: 815 ENAFSASDHDPVIVALSY 832 >gi|294677951|ref|YP_003578566.1| exodeoxyribonuclease III [Rhodobacter capsulatus SB 1003] gi|294476771|gb|ADE86159.1| exodeoxyribonuclease III-1 [Rhodobacter capsulatus SB 1003] Length = 259 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 85/303 (28%), Gaps = 68/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + L + + + D+V LQE+ S + Sbjct: 1 MKIATFNING----------------IKARAEALPAWLRAAEPDVVLLQEIKST---DEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ ++ +A+ + D +R Sbjct: 42 FPQEVLDG-------TGYTVHTHGQKSFNGVAILSRLPLEDVTRGLPGDDSDDQARW--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E V I + + V ++L + + Y + ++ + S Sbjct: 92 --IEATV-IGTRAVRVCGLYLPNGNPAPGPKYDYKLA------WMARMQARVETLLRSEE 142 Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249 P V AGD+N + + N L + + Sbjct: 143 PLVFAGDYNVIPQDEDAAKPESWRADALALPETRAAFRRIVNLGLTDAFRARVPGPGQYS 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A L D G++ SDH P+ I Sbjct: 203 FWDYQAGAWQKNNGIRIDHLLLSPQAADLLRDAGI-------DKEVRAGEKPSDHVPVWI 255 Query: 301 DYD 303 D D Sbjct: 256 DLD 258 >gi|187927447|ref|YP_001897934.1| endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12J] gi|309779851|ref|ZP_07674606.1| endonuclease/exonuclease/phosphatase [Ralstonia sp. 5_7_47FAA] gi|187724337|gb|ACD25502.1| Endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12J] gi|308921428|gb|EFP67070.1| endonuclease/exonuclease/phosphatase [Ralstonia sp. 5_7_47FAA] Length = 248 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 91/285 (31%), Gaps = 49/285 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA---V 80 +R+ ++NI+ + +RQ ++DADIVFLQE+ N Sbjct: 4 LRVATYNIH----------KGVTGIARRVRVHDVRQGLHSMDADIVFLQEVQDRNDRLVA 53 Query: 81 AKVFPKNT---WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A++F N + + + H A+ + +L ++ + S Sbjct: 54 AELFDPNYTQLRYLATDVYPHTVYGRNAVYEHGHHGNAILSRFPILLSENLDI-----SD 108 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R R + + ++ ++ +L H F +QA+ L D + Sbjct: 109 HRFEQRGLLHAVTDLGFGEVHLLCAHFGLF-------------ARSRQRQAEALVDRVRS 155 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 P V+AGDFN N L + + + + + + + + Sbjct: 156 VVPPDAPLVVAGDFNDWNNRLD--RTICQALGATEVADKAANAR--PVRTFPSHMPWLRL 211 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D + +I + SDH P+ + Sbjct: 212 DRIYVRG-----------FDIERAHALTGREWAQRSDHVPLLAEL 245 >gi|92117300|ref|YP_577029.1| exodeoxyribonuclease III (xth) [Nitrobacter hamburgensis X14] gi|91800194|gb|ABE62569.1| Exodeoxyribonuclease III [Nitrobacter hamburgensis X14] Length = 266 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 87/305 (28%), Gaps = 71/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +R+ +WN+N L + D+V LQE+ Sbjct: 1 MRIATWNVN----------------SVRQRLDHLLAWLGETAPDVVCLQEIKCVDEQFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + +A+ K + D SR Sbjct: 45 EAIEALGYNVVTH------------GQKTFNGVALLSKFPFDETRPRLAGDDGDVQSRF- 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E +V + + + ++L + ++ + Y + L ++ ++ +S Sbjct: 92 ----LEGVVSLKHGVVRIACLYLPNGNPPNTEKYPYK------LKWISRLIEYSKERLKS 141 Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246 FV+AGDFN + ++T+ D+ + Sbjct: 142 EETFVLAGDFNVIPAPRDVYNPAAWVDDALFRPQTREAFQTLLGLGLTDALRAASDATGD 201 Query: 247 ANKNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 N + ID+ ++ A L D ++ SDH P+ Sbjct: 202 YTFWDYQAGAWQKNNGLRIDHLLLSPQASDRLSAVGI-------DRHVRGWEKASDHVPV 254 Query: 299 SIDYD 303 ID D Sbjct: 255 WIDLD 259 >gi|307609446|emb|CBW98940.1| hypothetical protein LPW_07251 [Legionella pneumophila 130b] Length = 256 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 82/305 (26%), Gaps = 76/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +L SWN+N+L + Q+ ++ D++ +QE Sbjct: 2 FKLASWNVNSL----------------KVRLEQVLQWLESSQVDVLAMQET--------- 36 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + S + +A+ + + R Sbjct: 37 -KLTDENFPVVSFTDKGYHVIFSGQKTYNGVAIISRYPMT------DIQTDIPELEDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V K I ++++++ + L S + Y + +I + Sbjct: 90 RILAATV----KGIRLINLYVPNGGELTSDKYQYKLD------WLNKVTRFIQHEISIYS 139 Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + GDFN + F K ++ L + A Sbjct: 140 KVAVVGDFNIAPDDRDVHDPVEWEGCVLVSPPERQAFMKILELG--LHDSFRNFAQEEKA 197 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ Q D + +R SDH P+ Sbjct: 198 FSWWDYRAAAFRRNRGLRIDHVLLSHELNALCRQS-------KIDKEPRKAERPSDHAPV 250 Query: 299 SIDYD 303 ++ + Sbjct: 251 WVELE 255 >gi|295107237|emb|CBL04780.1| exodeoxyribonuclease III [Gordonibacter pamelaeae 7-10-1-b] Length = 285 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 76/312 (24%), Gaps = 60/312 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R +SWN+N L + LDADIV LQE Sbjct: 1 MRFISWNVNGLRAVQKKGFE---------------DIVCELDADIVALQETKLQEG-QAT 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDI-------HTAIAVRKKNVRVLQQSYPLLGAKDS 136 + ++S +S R++ +P D Sbjct: 45 LDLPQYREYWSYAEKKGYSGTAVFTKEQPLQVLHGLGSDYLDAEGRIVALEFPQFWFVDV 104 Query: 137 F-SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + A N A L+ + L Sbjct: 105 YTPNAQNELARIAHRMEWDDAFRDFCKGLEEGVLPADVPVQRPAPGEGHVC-ISELPLTQ 163 Query: 196 TQKKESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKE 240 + + P V+ GDFN + + + F + Sbjct: 164 PGETAAPKPVVMCGDFNVAHQEIDLKNPGPNRGKAGFSDEERGKFTDLLEAGFVDTFRRL 223 Query: 241 KDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 A + IDYF++ ++ + + +Y Sbjct: 224 HPDVTGAYSWWSYRFKARQNNAGWRIDYFLVSESLAPKVASACIYDEVY----------- 272 Query: 292 LSDHCPISIDYD 303 SDHCP+ ++ + Sbjct: 273 GSDHCPVGLELE 284 >gi|258445359|ref|ZP_05693550.1| sphingomyelinase [Staphylococcus aureus A6300] gi|257855877|gb|EEV78801.1| sphingomyelinase [Staphylococcus aureus A6300] Length = 330 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 58/298 (19%), Positives = 92/298 (30%), Gaps = 32/298 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++LVS N+ LS L+ N + +D Y K + D+V E A K Sbjct: 42 DLKLVSHNVYMLST----VLYPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDK 95 Query: 83 VFPKNTWCIFYSTE--------RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + Y T S +A+ K + + Sbjct: 96 LLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC 155 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 F N+ V +E NGK I V+ H +S DS + ++Q + + D+ Sbjct: 156 -GFDNDSNKGFVYTKIEKNGKNIHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDF 210 Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNAN 248 + + I GD N D K ++ ND L N Sbjct: 211 VKKKNIPKDETVYIGGDLNVN-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYN 269 Query: 249 KNLRNKIPIDYFVMDQNAYK--FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300 +DY D++ + L+ E +E D + SDH PI Sbjct: 270 YPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 327 >gi|256374352|ref|YP_003098012.1| endonuclease/exonuclease/phosphatase [Actinosynnema mirum DSM 43827] gi|255918655|gb|ACU34166.1| Endonuclease/exonuclease/phosphatase [Actinosynnema mirum DSM 43827] Length = 821 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 41/331 (12%), Positives = 87/331 (26%), Gaps = 69/331 (20%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMG 75 A+ ++ + ++N+ L+ + + L D+V L+E+ Sbjct: 488 ATGRHELSVATYNVENLAATND-----------QAKFDRLAAAVVANLRSPDVVVLEEIQ 536 Query: 76 SYNAVAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N A V + + + N +I Sbjct: 537 DDNGTANDGTVTASATYQRFTDAIVAKGGPRYQWRQIDPVNNADGGAPGGNIRVGFLFNP 596 Query: 119 KNVRVLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKI 157 V + ++ P + + +R+ + G+ + Sbjct: 597 GRVSFVDRAGGDATTPVSVVKSRGRAALSVSPGRIEPANEAWDASRKPLVGEFSFLGRTV 656 Query: 158 WVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDF 211 +VL H S ++ Y S +QA LK ++ + K + V+AGD Sbjct: 657 FVLANHFNSKGGDQAMHGRYQEPVRSSEEQRLKQATLLKGFVDEVKSVDRGANVVLAGDL 716 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N K + + + + N +D+ ++ N Sbjct: 717 NDYQFSP----VVAKLTEGGQVVDLMSTLPANERYSYVYEGNSQTLDHILLSSNVK---- 768 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P + Sbjct: 769 ----RYRYDVVRINAEFADQASDHDPQVVKI 795 >gi|87307161|ref|ZP_01089306.1| probable secreted protein [Blastopirellula marina DSM 3645] gi|87289901|gb|EAQ81790.1| probable secreted protein [Blastopirellula marina DSM 3645] Length = 262 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 85/304 (27%), Gaps = 49/304 (16%) Query: 1 MIRKYVLALV--FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 MIR + L+ + + +A+ + +R++S+NI+ +G D + Sbjct: 1 MIRNLLTILLSLWCITTASAAQPEPLRILSYNIHHGEGVDG-----------KLDLPRIA 49 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 K++ +V LQE+ + A + + + A+ Sbjct: 50 AVIKSVAPHLVLLQEVDCHTARTGNVDQAAELGKLTGMEVAF-GGNLRLGKGDYGNAILS 108 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + +++ L + +R V + VL HL + Sbjct: 109 RFPLTEVKNHSLPNLTNGETRGVLSAMVRFPSSTGDEPFLVLATHL-----------DHR 157 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + +++ + +K+ + +I GDFN + + Sbjct: 158 AGEADRLASIDFIRQLVGEKERTT---IIGGDFNATLESA--------VLKRFQEHWTLS 206 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ + I SDH P Sbjct: 207 NLVEKPTFPVAKPER--QIDFVGYRP--MRRFRVGEVRVIDEAI---------ASDHRPF 253 Query: 299 SIDY 302 ++ Sbjct: 254 LVEL 257 >gi|113969789|ref|YP_733582.1| exonuclease III [Shewanella sp. MR-4] gi|113884473|gb|ABI38525.1| Exodeoxyribonuclease III [Shewanella sp. MR-4] Length = 270 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 84/309 (27%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L S L+ + DI+ LQE ++ Sbjct: 1 MKIVSFNINGL----------------RSRLHQLQALIDSHQPDIIGLQETKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K + Q +D A R Sbjct: 42 -------FPLAEVEAMGYHVHYHGGKAHYGVAMLSKVAPIKVQKGFATDGED----AQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+ + VL+ F + + Q L + + Sbjct: 91 MIIGTFAQANGRPLTVLN-----GYFPQGESIDHPTKYPAKRKFYQDLMAHLHANHSNDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 I GD N ++ ++ KT+ + F + Sbjct: 146 DIAIIGDINISPIDLDIGIGEVNRKRWLKTGKCSFQPEEREWLKTLQDWGLVDTFRQLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 R + ID + + L++ + D + S Sbjct: 206 DRSERYSWFDYRSKGFDDNRGLRIDVILATPSLAARLVES-------DVDYDLRGIDKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|300691333|ref|YP_003752328.1| exodeoxyribonuclease III [Ralstonia solanacearum PSI07] gi|299078393|emb|CBJ51043.1| EXODEOXYRIBONUCLEASE III [Ralstonia solanacearum PSI07] Length = 269 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 96/303 (31%), Gaps = 61/303 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+L + + + +D T + D++ LQE+ + + Sbjct: 1 MRVATWNVNSL--KVRLPHVLQWLGEREADATPI---------DLLCLQELKLPDDRYPL 49 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + + +A+ + + + ++ F+ R Sbjct: 50 AELDA----------AGYASLFTGQKTYNGVAILARKA-AMPEGRDVVKNIPGFADEQQR 98 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V ++ G + V+ + + LDS + Y + L+DW+ + + Sbjct: 99 -IVAATYDVAGGPVRVISAYFPNGQALDSDKMVYK------MRWLAALQDWLKAEMAAHP 151 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GDFN + ++ ++ + F + Sbjct: 152 RLMLLGDFNIAPDDRDVHDPKKWEGMNLVSPEERAAFRALEGAGLVDAFRMFDQAD-KLF 210 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID+ ++ + + D + ++ SDH P+ Sbjct: 211 SWWDYRLFAFKRNAGLRIDHILLSPDLARLCESCHI-------DRVPRGWEQPSDHTPVV 263 Query: 300 IDY 302 Sbjct: 264 AAL 266 >gi|86146435|ref|ZP_01064758.1| exodeoxyribonuclease III [Vibrio sp. MED222] gi|85835698|gb|EAQ53833.1| exodeoxyribonuclease III [Vibrio sp. MED222] Length = 268 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 80/309 (25%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQAIIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K + Q +D R Sbjct: 42 -------FPLADVEAMGYKVYFHGQKAHYGVAMLCKQEPISVQKGFPTDNEDHQK----R 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+KI VL+ F + + + L ++ Sbjct: 91 MIMATFEDDNGEKITVLN-----GYFPQGDNIKHETKYPYKREFYKDLMTYLNDYHNKDE 145 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ KT+ + F Sbjct: 146 QVIVMGDINISPTDIDIGIGEPNAKRWLKTGKCSFQPEEREWLKTLMDWGFVDSFRLLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + D ++ S Sbjct: 206 EVNDQYSWFDYRSKGFVDNRGLRIDVVLATQKLADKCTEAGI-------DYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|312796736|ref|YP_004029658.1| Exodeoxyribonuclease III [Burkholderia rhizoxinica HKI 454] gi|312168511|emb|CBW75514.1| Exodeoxyribonuclease III (EC 3.1.11.2) [Burkholderia rhizoxinica HKI 454] Length = 259 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 89/304 (29%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN+L + + D++ LQE+ Sbjct: 1 MKIATWNINSL----------------KVRLQHVIDWLAMSRVDVLCLQELK-------- 36 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P + + + + S + +A+ ++ + ++ + F R Sbjct: 37 LPDDKYPR--AALEAAGYRSWFSGQKTYNGVAILVRDGLPVDEAVVIRNIP-GFDDLQQR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ + V+ + + + + Y S L++W+ + + Sbjct: 94 -LIAATID----GVRVVSAYFPNGQAPGTDKFAYKLS------WLAALREWVAAEMRAHP 142 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 F + GD+N D ++++ + F + + Sbjct: 143 QFALTGDYNIAPEDRDVHDPQAWEGQNLVSPEERDAFRSLVELGLVDAFRCFEQPD-KSF 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ++ ID+ ++ + + D R + SDH P+ Sbjct: 202 SWWDYRMLAFRRNAGLRIDHILLSPSLAQCCSACEI-------DKTPRRWDQPSDHAPVI 254 Query: 300 IDYD 303 + Sbjct: 255 ATLE 258 >gi|304394302|ref|ZP_07376225.1| exodeoxyribonuclease III protein [Ahrensia sp. R2A130] gi|303293742|gb|EFL88119.1| exodeoxyribonuclease III protein [Ahrensia sp. R2A130] Length = 269 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 38/310 (12%), Positives = 85/310 (27%), Gaps = 69/310 (22%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A+ + +WNIN L+ ++ D++ LQE+ V Sbjct: 2 AKPFSIATWNIN----------------SVRLRIGLVEKFLAEHQPDVLCLQEI---KCV 42 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++FP + + + +A K+ S + D+ Sbjct: 43 NELFPADAFTAA------GYPHHAVHGQKGYHGVATVSKHPLTETASADYVAMGDTRH-- 94 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 VE +V+ G + + + ++ + D + +P + + +K + Sbjct: 95 -----VECIVQSPGGPVRMHNFYVPAG--GDVADPAVNPKFDHKMKFIEEMKAL--GCDD 145 Query: 201 SLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 VP ++ GD N + D + + + + Sbjct: 146 GDVPAILVGDLNIAPLETDVWSHKQLLKVVSHTPVETDGLNEVMAKGGWTDLIRQHIPAE 205 Query: 245 CNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + +D+ L + ++ SD Sbjct: 206 DILFTWWSYRSKDWDAADKGRRLDHIWSSPKLASSLSK-------IEVLREARGWEKPSD 258 Query: 295 HCPISIDYDF 304 H P+ +DF Sbjct: 259 HVPVIARFDF 268 >gi|282890589|ref|ZP_06299112.1| hypothetical protein pah_c022o186 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499586|gb|EFB41882.1| hypothetical protein pah_c022o186 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 330 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 96/322 (29%), Gaps = 57/322 (17%) Query: 3 RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 +KY ++ +K+R+V++N+ + E + + +R + + Sbjct: 41 QKYSYPQFLEILAALQKHKEKLRIVTYNVLSNRYDENLEEVNHWSQR----LPKIVGLIE 96 Query: 63 NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 +D DI+ +QE+ + + ++ + + + + I RK Sbjct: 97 EMDPDILGVQELY-PDQLKELHAYLRGAYAFYGKPCV--------DGEINGIFFRKNRFL 147 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 V + L ++L I GK + + + HL Sbjct: 148 VQDRQVWYLDENPKDPSTETLTMLKLKDLITGKLLAIFNTHLAMQP------------IE 195 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW-------------KTID 229 +A+ + + I + +P ++ GD N N D + K ++ Sbjct: 196 KRELEARLISEHIQKHASH-LPIILTGDLNTFPNRPDLIDLPFYDGDYILSILKGKKFLN 254 Query: 230 PNDSLIRFPKEKDSRCNANKNLR---------NKIPIDYFVMDQNAYKFLIQESFSEILY 280 + + + +D+ ++ + ++ + Sbjct: 255 DAKDISLLGHLGPLATFTSNGKDSTPFKGIGLPGVFLDHIMVSNDIQVWVHAVQAGTV-- 312 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 G SDH P+ D Sbjct: 313 -------EGHFPSDHMPVIADI 327 >gi|145589433|ref|YP_001156030.1| exodeoxyribonuclease III Xth [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047839|gb|ABP34466.1| Exodeoxyribonuclease III [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 282 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 37/313 (11%), Positives = 85/313 (27%), Gaps = 66/313 (21%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNA 79 +R+ +WN+N+L R L+ + D + LQE+ + Sbjct: 2 TDSIRIAAWNVNSL------------KVRLPHVIRWLKDQEQANQPIDALCLQELKLTDD 49 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV------RKKNVRVLQQSYPLLGA 133 + + + + +A+ ++ Sbjct: 50 ----------KYPHQELEDEGYVSLAAGQKTYNGVAIIVRKAALAPIASDESTTFLKQAR 99 Query: 134 KDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 +R + + G + I ++ + + DS + Y Q L+ Sbjct: 100 NIPGFEDEQQRILAATIPFAGMQPIRLISAYFPNGQSPDSDKFAYK------LNWMQSLE 153 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIR----------FP 238 DW+ Q+ +S + GDFN +D + P + Sbjct: 154 DWLVQELQSNTRLALLGDFNIAPADADVHDPKAWEGQNLVSPPERAAFESLIKLGLCDSF 213 Query: 239 KEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + ++ ID+ ++ + D + Sbjct: 214 RIFEQTPKTYSWWDYRMMGFRRNAGMRIDHILLSDPLKEKCSASFV-------DKLPRSW 266 Query: 290 KRLSDHCPISIDY 302 ++ SDH P+ + Sbjct: 267 EQPSDHAPVVAEI 279 >gi|254286781|ref|ZP_04961735.1| exodeoxyribonuclease III [Vibrio cholerae AM-19226] gi|150423208|gb|EDN15155.1| exodeoxyribonuclease III [Vibrio cholerae AM-19226] Length = 268 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 83/311 (26%), Gaps = 76/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++S+NIN L + L+ D++ LQE + Sbjct: 1 MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEAFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +++ H +A+ K V + G Sbjct: 45 QEVEAMGYQVYFH------------GQKAHYGVAILCKQTPVEV----IKGFPTDNEEHQ 88 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + NG+K +L+ F + Q + L ++ + + + Sbjct: 89 KRMIMATFADQNGQKTTILN-----GYFPQGDNVEHKTKFPYKRQFYRDLMTYLREHRSN 143 Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240 V+ GD N ++ ++ +T+ + F + Sbjct: 144 SERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSFQPEEREWLQTLLDWGLVDTFRQL 203 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + + + D + Sbjct: 204 HPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLAETCQEAGI-------DYELRAIDK 256 Query: 292 LSDHCPISIDY 302 SDH PI + Sbjct: 257 PSDHAPIWATF 267 >gi|325269228|ref|ZP_08135847.1| endonuclease/exonuclease/phosphatase family protein [Prevotella multiformis DSM 16608] gi|324988457|gb|EGC20421.1| endonuclease/exonuclease/phosphatase family protein [Prevotella multiformis DSM 16608] Length = 326 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 33/336 (9%), Positives = 84/336 (25%), Gaps = 46/336 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNS-----------VKRT 50 +R ++ + L ++ +V N L + +L ++ + Sbjct: 1 MRLALIFIFTVLTTLQTFAQSRLTVVELNAENLFDTRHDTLKEDREFLPDSPRHWTRTKY 60 Query: 51 TSDYTLLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS 102 Q DIV L E+ + + + + ++ + + Sbjct: 61 WEKLNRTGQTLIACGEDGSGWHLPDIVGLCEVENDSVLFDLTRRS-----LLRKARYEYV 115 Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLD 161 S + +A+ + R + + E+ NG + V Sbjct: 116 MTASGDVRGIDVALLYSPFSFRLIRADTIRVAPILDMRPTRDILHVEGEVENGDTLHVFL 175 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 +H S + + A S ++ GDFN + Sbjct: 176 VHAPSRMGGELYSRPFRKHVVNRLCDAVDSLRLCH----SDPKVLVMGDFNDYPDSPSLQ 231 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS----- 276 + + + + + + +D ++ +N + + Sbjct: 232 TAYTHGLVN---VSAEARGSNGAKGTYRYHGAWGSLDQILVSENLRERVSGCHVHDAVFL 288 Query: 277 ---------EILYNEDDIKSRGKRLSDHCPISIDYD 303 + SDH P+ + + Sbjct: 289 LEPDEKYGGVKPRRNYNGMRYNNGFSDHLPLVLHLE 324 >gi|284031647|ref|YP_003381578.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283810940|gb|ADB32779.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 803 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 41/329 (12%), Positives = 88/329 (26%), Gaps = 66/329 (20%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 S A +V + ++N+ L +G + + + + DI+ L+E+ Sbjct: 481 TAPSSALQVSVATFNVENLDPSDGPAKFDGLAQAVVKNLA---------SPDILALEEVQ 531 Query: 76 SYNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + + + + + + + +I A R Sbjct: 532 DNDGATNSGSTGADLTLNTLAAAIRAAGGPKY-AWRQIDPVDGEEGGEPGGNIRVAFMYR 590 Query: 118 KKNVRVLQ-----------------------QSYPLLGAKDSFSRAGNRRAVELLVEING 154 + P + + A R + +G Sbjct: 591 TDRPVKFVDRPGGGSTTATAVTADKFGRPHLSASPGRVDPANPAWASARVPLAGEFSWHG 650 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK--KESLVPFVIA 208 + ++V+ H S D L P S + +QA+ ++ ++ Q K+ ++ Sbjct: 651 QSLFVVVNHFSSKGGDDPLWGRTQPPVQSSAAKRHEQARSVRGFVDQILAKDRGANVIVL 710 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 GD N D + N +D ++ QN Sbjct: 711 GDINDFEFSTTT--DILVGSGRTTLTSLPRTLPAKERYSYVFEGNSQILDQILISQNLR- 767 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + D ++SDH P Sbjct: 768 LASSYDIVHMNAEFPD------QISDHDP 790 >gi|212634722|ref|YP_002311247.1| exonuclease III [Shewanella piezotolerans WP3] gi|212556206|gb|ACJ28660.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Shewanella piezotolerans WP3] Length = 268 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 92/310 (29%), Gaps = 72/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L+ + D++ LQE + Sbjct: 1 MKIVSFNINGL----------------RARLHQLQALIDSHQPDVIGLQE---TKVHDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + H +A+ K + Q G A R Sbjct: 42 FP-------LADVEAMGYKVHYHGGKAHYGVAMLSKAEPLKVQK----GFPTDEEDAQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ NG+++ VL+ F ++ + + L ++ + + Sbjct: 91 MIMGTFMQENGRQLTVLN-----GYFPQGDNISHETKYPAKRKFYKDLMVYLNEHHSADE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 I GD N ++ ++ KT+ + F + Sbjct: 146 DIAIIGDINISPVDLDIGIGEPNAKRWLKTGKCSFQPEEREWLKTLMDWGLVDTFRQLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 +R + ID + ++ L++ + D ++ S Sbjct: 206 TRTERYSWFDYRSKGFVDNRGLRIDVVLATKSLAARLVES-------DVDYDLRGIEKPS 258 Query: 294 DHCPISIDYD 303 DH PI + Sbjct: 259 DHAPIWSSFS 268 >gi|309379045|emb|CBX22347.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 256 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 87/304 (28%), Gaps = 73/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + DI+ LQE Sbjct: 1 MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ +N S R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVHF-----GLPSLPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V++++ + LDS + Y Q L +++ + Sbjct: 90 RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRYG 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D +++ + + Sbjct: 140 KLVLLGDFNIAPADADCYDPKKWYEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGVF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ + L D +R SDH P++ Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMAEALKDV-------RVDLDTRALERPSDHAPVT 251 Query: 300 IDYD 303 ++D Sbjct: 252 AEFD 255 >gi|300705174|ref|YP_003746777.1| metal dependent endonuclease/phosphatase [Ralstonia solanacearum CFBP2957] gi|299072838|emb|CBJ44194.1| putative metal dependent endonuclease/phosphatase [Ralstonia solanacearum CFBP2957] Length = 248 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 46/286 (16%), Positives = 92/286 (32%), Gaps = 49/286 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----A 79 +R+ ++NI+ + +RQ +DADIVFLQE+ N A Sbjct: 4 LRVATYNIH----------KGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVA 53 Query: 80 VAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 P T + +T + + + H A+ + +L ++ + S Sbjct: 54 AELFDPSYTQLRYLATDVYPHTVYGRNAVYDHGHHGNAIMSRYPILLSENLDI-----SD 108 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R R + + ++ ++ +L H F +QA+ L + + Sbjct: 109 HRFEQRGLLHAVTDLGFGEVHLLCAHFGLF-------------ARSRQRQAEALIERVRS 155 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 + P V+AGDFN N L + + + + + + + + Sbjct: 156 VVPTDAPLVVAGDFNDWNNRLD--RVICQALGATEVADKAAGAR--PLRTFPSHLPWLRL 211 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + +I + SDH P+ + Sbjct: 212 DRIYVRG-----------FDIERAHALTGRDWAQRSDHVPLLAELS 246 >gi|148360698|ref|YP_001251905.1| hypothetical protein LPC_2645 [Legionella pneumophila str. Corby] gi|296106237|ref|YP_003617937.1| exodeoxyribonuclease III [Legionella pneumophila 2300/99 Alcoy] gi|148282471|gb|ABQ56559.1| hypothetical protein LPC_2645 [Legionella pneumophila str. Corby] gi|158512142|gb|ABW69103.1| exodeoxyribonuclease III [Legionella pneumophila] gi|295648138|gb|ADG23985.1| exodeoxyribonuclease III [Legionella pneumophila 2300/99 Alcoy] Length = 256 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 86/305 (28%), Gaps = 76/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +L SWN+N+L + Q+ ++ D++ +QE + Sbjct: 2 FKLASWNVNSL----------------KVRLEQVLQWLESSQVDVLAMQETKLTDD---- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + S + +A+ + + R Sbjct: 42 ------NFPVASFTDKGYHVIFSGQKTYNGVAIISRYPMT------DIQTDIPELEDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V K I ++++++ + L S + Y + + +I + Sbjct: 90 RILAATV----KGIRLINLYVPNGGELTSDKYQYKLD------WLKKVTRFIQHQLSIYS 139 Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247 + GDFN +D F + ++ L + A Sbjct: 140 KVAVVGDFNIAPEDRDVHDPVEWEGCVLVSPAERQAFMEILELG--LHDSFRNFAQEEKA 197 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ Q D + +R SDH P+ Sbjct: 198 FSWWDYRAAAFRRNRGLRIDHVLLSHELNALCRQS-------KIDKEPRKAERPSDHAPV 250 Query: 299 SIDYD 303 ++ + Sbjct: 251 WVELE 255 >gi|325267794|ref|ZP_08134444.1| exodeoxyribonuclease III [Kingella denitrificans ATCC 33394] gi|324980675|gb|EGC16337.1| exodeoxyribonuclease III [Kingella denitrificans ATCC 33394] Length = 258 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 81/304 (26%), Gaps = 73/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + DI+ LQE Sbjct: 1 MKICTWNVNSLN----------------VRLPHVTDWLAQHQPDILVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ S + +A+ ++ G R Sbjct: 35 LKLEHDKFPVAALNMMGWQCAWSGQKTYNGVAIISRHAIKDVH----TGLPALPDDPQQR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V++++ + LDS + Y Q L D+I Q+ + Sbjct: 91 VIAATV-----NGVRVVNVYCVNGESLDSEKFAYKR------QWFAALTDFIRQQMQQYP 139 Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D +++ + + + Sbjct: 140 KLVLLGDFNIAPTDDDVYDPEKWREHIHCSSEERAWFQALLDLGLTDCLRHVHPTGAH-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ + L D +R SDH P+ Sbjct: 199 TWWDYRGAMFQRKLGLRIDHILATAALRDVLRDVQI-------DTEARAKERPSDHAPVF 251 Query: 300 IDYD 303 +D Sbjct: 252 ALFD 255 >gi|59712190|ref|YP_204966.1| exonuclease III [Vibrio fischeri ES114] gi|59480291|gb|AAW86078.1| exonuclease III [Vibrio fischeri ES114] Length = 268 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 79/309 (25%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ + D++ LQE+ +N + Sbjct: 1 MKVISFNINGL----------------RARLHQLQAIIDKHNPDVIGLQEIKVHNEM--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K + Q ++ R Sbjct: 42 -------FPVEAVEAMGYKVYFHGQKAHYGVAMLCKQEPISVQYGFDTDTEEHQK----R 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +G K+ +++ F + Q + L + + Sbjct: 91 MIMTTHQREDGSKVTIMN-----GYFPQGDNIKHETKFPYKRQFYKDLMTHLHTHHTNDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ ++ +T+ F Sbjct: 146 EIIVMGDINISPIDADIGIGEPNAKRWLKTGKCSFQPEEREWLQTLKDWGFEDTFRNLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + D ++ S Sbjct: 206 EVTDQFSWFDYRSKGFVDNRGLRIDVIMATPTLAVKCTESGI-------DYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|29347026|ref|NP_810529.1| hypothetical protein BT_1616 [Bacteroides thetaiotaomicron VPI-5482] gi|253572661|ref|ZP_04850062.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 1_1_6] gi|29338924|gb|AAO76723.1| endonuclease/exonuclease/phosphatase family [Bacteroides thetaiotaomicron VPI-5482] gi|251837793|gb|EES65883.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 1_1_6] Length = 373 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 39/328 (11%), Positives = 91/328 (27%), Gaps = 57/328 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSV-----------KRTTSDYTLLRQYAKNLD----AD 67 R++SWN+ L + +L ++ + + + + Sbjct: 52 PFRVMSWNVENLFDTHHDTLKNDNEFLPDAIRHWNYTKYKKKLADMARVITAVGEWNPPA 111 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 +V L E+ + + + + ++ + + I A+ ++ ++L Sbjct: 112 LVGLCEVENDSVLRDLTQRSPLKELGYRYVMTSSPDL---RGIDVALLYQRDLFKLLS-- 166 Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYS-PSCSLLS 185 + + R + + + + G + V+ HL S Y + +L Sbjct: 167 FRSIPIPSFKHHRPTRDLLHVSGLLLTGDTLDVIVCHLPSRSGGAKESEPYRLHAARILR 226 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT---------IDPNDSLIR 236 +A L + VI GDFN + T + Sbjct: 227 TEADSLLN-----IRLHPQLVIMGDFNDYPTNKSIKEILEATAPKHSVTFPNPRKLYHLL 281 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL---------------------IQESF 275 K + K +D+ ++ N ++ Sbjct: 282 ARKATSRHFGSYKYHGEWGLLDHLIVSGNLLDASSKFFTGEDKANVARLPFLLTEDKKYG 341 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +SDH PI D++ Sbjct: 342 DDEPFRTYKGMKYQGGISDHLPIYADFE 369 >gi|329724164|gb|EGG60682.1| sphingomyelin phosphodiesterase [Staphylococcus epidermidis VCU144] gi|329735747|gb|EGG72028.1| sphingomyelin phosphodiesterase [Staphylococcus epidermidis VCU028] Length = 327 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 42/299 (14%), Positives = 98/299 (32%), Gaps = 33/299 (11%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++ + N+ L +++ N + +D Y + + D+V L E+ A Sbjct: 35 DSLKITTHNVYFLPT----AIYPNWGQSQRADLISKADYIQ--NQDVVILNELFDKKASK 88 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGA 133 ++ + Y T + ++ N + + K V Q+ + + Sbjct: 89 RLLTRLHSQYPYQTPIVGKGTEGWQNTSGTYRKIKKVSGGVGIVSKWPIVQQEQH-IYKK 147 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 AGN+ + + NGK ++ HL++ + + Q +K Sbjct: 148 GCGADMAGNKGFAYIKINKNGKYHHIIGTHLQA----EDPTCFKGKDKDIRQSQMSEIKQ 203 Query: 194 WI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 +I + P I GD N I ++ + ++N + Sbjct: 204 FIKDKNIPKNEPVYIGGDLNV-IKDSDEYQQMANNLNVSLPTQFDGNAYSWDTSSNSIAK 262 Query: 253 N------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPIS 299 +DY ++D++ + + + + + + + SDH P+S Sbjct: 263 YNYPKLEPQHLDYILLDRDHAQPSSWHNDTHRVKSPEWSVKSWGKTYKYNDYSDHYPLS 321 >gi|218263783|ref|ZP_03477768.1| hypothetical protein PRABACTJOHN_03458 [Parabacteroides johnsonii DSM 18315] gi|218222514|gb|EEC95164.1| hypothetical protein PRABACTJOHN_03458 [Parabacteroides johnsonii DSM 18315] Length = 351 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 41/355 (11%), Positives = 94/355 (26%), Gaps = 67/355 (18%) Query: 7 LALVFFLVPCTASVAQK-VRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDY 54 + + S Q R++S+N+ L + + + + R Sbjct: 1 MTFFILTLFSLPSQGQTDFRVMSYNVENLFDTKDDPFTADNDFLPSGNRHWTPGRFYHKL 60 Query: 55 TLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 L + +V L E+ + + + ++ + + I Sbjct: 61 QQLAKVITAAGEWSTPALVGLCEVENDSVLVRLLN---YTPLRRQHYRYCMTHGQDTRGI 117 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCF 169 + A+ ++ R + + R + + + I G +I V H S Sbjct: 118 NVALLYQRDKFRYRGHTEHPVRFTRKQH-KHTRNILHVWGDVITGDRIDVFVCHFPSRYG 176 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT-- 227 + + + L D + +I GDFN + + + + Sbjct: 177 GEKESEPDRLDAART---LRVLCDSL-HHLHPAPHILIMGDFNDTPDDMSIREILYAHPF 232 Query: 228 ----IDPND---------------SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 + +D F K+K ++K +D ++ + Sbjct: 233 PISCLSGSDSMPMKSRTDAYPSLHLYNLFAKDKPFFPGSHKYQGEWSQLDQLILSSSLTD 292 Query: 269 -----FLIQESFSEI----------------LYNEDDIKSRGKRLSDHCPISIDY 302 +I S + SDH P+ +D+ Sbjct: 293 TTSRMQVIPGSARIFSPPFLLTKDKTWRGERPFRTYYGFKYEGGYSDHLPLIVDF 347 >gi|153833025|ref|ZP_01985692.1| endonuclease/exonuclease/phosphatase [Vibrio harveyi HY01] gi|148870746|gb|EDL69652.1| endonuclease/exonuclease/phosphatase [Vibrio harveyi HY01] Length = 317 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 50/309 (16%), Positives = 95/309 (30%), Gaps = 30/309 (9%) Query: 24 VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + + N+ G S+ T + L+ DI+ LQE+ S N Sbjct: 7 ITFTTANLLNFVAPPGAYYDFENIYSLDDWQDKLTWTKSQFDQLNPDIIGLQEVFSINET 66 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137 F + + +++ + + A+A R ++ L D Sbjct: 67 QTFFAEIGYQ-YFACVDTPHIEGDYIYSRPVVAVASRFPIESFEAVTFDKDTLNAFGDID 125 Query: 138 SRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLD-------SLENTYSPSCSLLSQQAQ 189 + +R+ V + I V HLKS D S S +A Sbjct: 126 APPFSRKPVRATIIHPIIGHICVYVTHLKSQRPADSETPEQASRPIARWLSTQQRGWEAA 185 Query: 190 WLKDWITQKKESLV-PFVIAGDFNRKINYLGNNDDFWKTIDP--------NDSLIRFPKE 240 L+D + + + P ++ GD N+ I N+ + + ++ Sbjct: 186 MLRDAMQKHYANNPMPTLLMGDMNQAITQTSVNNVLVEQYGDSVTDLRLCDGWELQVAPS 245 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI------KSRGKRLSD 294 +SR + + +DY ++ Q Y D R K SD Sbjct: 246 LESRPATHYHFAKGNVLDYILLSQEFDAHADVSIAEVTNYQVLDAHLINPSFERDKNASD 305 Query: 295 HCPISIDYD 303 H +++ + Sbjct: 306 HAFVALTVE 314 >gi|171318391|ref|ZP_02907548.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5] gi|171096399|gb|EDT41299.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5] Length = 269 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 86/286 (30%), Gaps = 56/286 (19%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P A + +R+ ++NI T + Q LDAD++ LQE+ Sbjct: 20 PAAAPGGRDLRIATYNIRG-----------GYGAWHTRAADRIAQVIHELDADVIALQEV 68 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 A + +T + AV + ++ L Sbjct: 69 PLGGTHAHDVLAHLRD---ATGMHAVAGPTIDTPERRYGNAVLSRCPVRAARTLDL---- 121 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 SF + R A++ ++ + I V+ HL S S Q Q L Sbjct: 122 -SFHQREPRGALDADIDCSAGTIRVVATHLGL-------------SARERSAQVQRL--- 164 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + +P ++ GD N + F + + RF + R Sbjct: 165 LAAFDTGAMPVILMGDIN---------EWFVRGRALRALVTRFRRAPAPRTFPTLYPMFS 215 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +D + ++L+ + + +R SDH P+ Sbjct: 216 --LDRIWIHPG--EWLVDVNVHRSVR--------ARRASDHYPLVA 249 >gi|297208971|ref|ZP_06925374.1| Sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|46591|emb|CAA43885.1| Sphingomyelinase [Staphylococcus aureus] gi|619317|gb|AAB32218.1| beta-hemolysin [Staphylococcus aureus] gi|296886361|gb|EFH25291.1| Sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|323439885|gb|EGA97601.1| beta-hemolysin [Staphylococcus aureus O11] Length = 331 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 92/298 (30%), Gaps = 32/298 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++LVS N+ LS L+ N + +D Y K + D+V E A K Sbjct: 43 DLKLVSHNVYMLST----VLYPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDK 96 Query: 83 VFPKNTWCIFYSTE--------RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + Y T S +A+ K + + Sbjct: 97 LLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC 156 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 F N+ V +E NGK + V+ H +S DS + ++Q + + D+ Sbjct: 157 -GFDNDSNKGFVYTKIEKNGKNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDF 211 Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNAN 248 + + I GD N D K ++ ND L N Sbjct: 212 VKKKNIPKDETVYIGGDLNVN-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYN 270 Query: 249 KNLRNKIPIDYFVMDQNAYK--FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300 +DY D++ + L+ E +E D + SDH PI Sbjct: 271 YPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 328 >gi|323455247|gb|EGB11116.1| hypothetical protein AURANDRAFT_62056 [Aureococcus anophagefferens] Length = 446 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 91/321 (28%), Gaps = 60/321 (18%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKN----SVKRTTSDY--TLLRQYAKNLDADIVFLQE 73 ++ +++V WNI + + S R ++ + L D+V LQE Sbjct: 59 ASKPLKVVVWNIQYGAGIRQHFFYDGGDAVSTPRHEVEFHTEAIGDALAALAPDVVLLQE 118 Query: 74 MGSYNAVAK----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + +A + + + + +H A R Sbjct: 119 VDRRSARTHRIDELAVVGEKLAAVGLVNRASAAYWRVPYVPHPKHDHVGRIGMHLATFSR 178 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + PLL RRAV + +L+ HL +F F D Sbjct: 179 YALGGATRYQLPLLKESRLRRLFNLRRAVLATPLAGDSAVTLLNTHLSAFSFGDGTVER- 237 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN--------------YLGNNDD 223 Q L++ I +++AGDFN Y + Sbjct: 238 ---------QVAALRETI--LPRQTRNWLLAGDFNSLTPYEAAATLSKDEAALYPEDETP 286 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 L P+++ + ID+ A +++ Sbjct: 287 VAPLYASTVPLWASPEDRIDTYKPWTSPAPDRTIDHAFASPGAA------------FSDA 334 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 ++ LSDH P+S+ + Sbjct: 335 KVERTDGYLSDHQPVSLTVTW 355 >gi|283471236|emb|CAQ50447.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus ST398] Length = 330 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 92/298 (30%), Gaps = 32/298 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++LVS N+ LS L+ N + +D Y K + D+V E A K Sbjct: 42 DLKLVSHNVYMLST----VLYPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDK 95 Query: 83 VFPKNTWCIFYSTE--------RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + Y T S +A+ K + + Sbjct: 96 LLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC 155 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 F N+ V +E NGK + V+ H +S DS + ++Q + + D+ Sbjct: 156 -GFDNDSNKGFVYTKIEKNGKNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDF 210 Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNAN 248 + + I GD N D K ++ ND L N Sbjct: 211 VKKKNIPKDETVYIGGDLNVN-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYN 269 Query: 249 KNLRNKIPIDYFVMDQNAYK--FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300 +DY D++ + L+ E +E D + SDH PI Sbjct: 270 YPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 327 >gi|256790330|ref|ZP_05528761.1| secreted protein [Streptomyces lividans TK24] Length = 279 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 37/284 (13%), Positives = 80/284 (28%), Gaps = 56/284 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY------ 77 + ++++NI+ + V D + + AD+V LQE+ + Sbjct: 39 LDVMTFNIHHAQGTDDVL-----------DLRRVANVIRKSGADVVGLQEVDKHYSARSD 87 Query: 78 --NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + A++ + + + + + + A+ + + L + Sbjct: 88 WADQPAELAELLGYHVVFGANIDNSPPAPGGHRVQY-GTAILSRYPITASDNTWLYKSPG 146 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R + ++++GKK+ + HL + D QQ + D I Sbjct: 147 Q----EQRGLLHATLDVHGKKVEFYNTHLAAGSQAD------------RLQQTAQVVDLI 190 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 +K P ++ GDFN + + Sbjct: 191 GTRK----PGILVGDFNALPAAPES----QPLQNAYTDAWAKSLHARGDGATYPAQSPTE 242 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ID + + Q + SDH P+ Sbjct: 243 RIDLIYATRRVTPLVAQ------------VLKDDPAASDHRPLL 274 >gi|197335145|ref|YP_002156399.1| exodeoxyribonuclease III [Vibrio fischeri MJ11] gi|197316635|gb|ACH66082.1| exodeoxyribonuclease III [Vibrio fischeri MJ11] Length = 268 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 79/309 (25%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ + D++ LQE+ +N + Sbjct: 1 MKVISFNINGL----------------RARLHQLQAIIDKHNPDVIGLQEIKVHNEM--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K + Q ++ R Sbjct: 42 -------FPVEAVEAMGYKVYFHGQKAHYGVAMLCKQEPISVQYGFDTDTEEHQK----R 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +G K+ +++ F + Q + L + + Sbjct: 91 MIMTTHQREDGSKVTIMN-----GYFPQGDNVKHETKFPYKRQFYKDLMTHLHTHHTNDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ ++ +T+ F Sbjct: 146 EIIVMGDINISPIDADIGIGEPNAKRWLKTGKCSFQPEEREWLQTLKDWGFEDTFRNLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + D ++ S Sbjct: 206 EVTDQFSWFDYRSKGFVDNRGLRIDVIMATPTLAVKCTESGI-------DYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|24374562|ref|NP_718605.1| exonuclease III [Shewanella oneidensis MR-1] gi|24349161|gb|AAN56049.1|AE015740_3 exodeoxyribonuclease III [Shewanella oneidensis MR-1] Length = 270 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 84/309 (27%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L S L+ + DI+ LQE ++ Sbjct: 1 MKIVSFNINGL----------------RSRLHQLQALIDSHQPDIIGLQETKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K + Q +D A R Sbjct: 42 -------FPLAEVEAMGYHVHYHGGKAHYGVAMLSKVAPLKVQKGFATDEED----AQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+ + VL+ F + + Q L + + Sbjct: 91 MIIGTFAQANGRPLTVLN-----GYFPQGESIDHPTKYPAKRKFYQDLMAHLHANHSNDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 I GD N ++ ++ KT+ + F + Sbjct: 146 DIAIIGDINISPIDLDIGIGEVNRKRWLKTGKCSFQPEEREWLKTLQDWGLVDTFRQLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 R + ID + + L++ + D + S Sbjct: 206 DRSERYSWFDYRSKGFDDNRGLRIDVILATPSLAARLVES-------DVDYELRGIDKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|83746623|ref|ZP_00943673.1| dioxygenase [Ralstonia solanacearum UW551] gi|207727912|ref|YP_002256306.1| endonuclease/exonuclease/phosphatase protein [Ralstonia solanacearum MolK2] gi|207742318|ref|YP_002258710.1| endonuclease/exonuclease/phosphatase protein [Ralstonia solanacearum IPO1609] gi|83726757|gb|EAP73885.1| dioxygenase [Ralstonia solanacearum UW551] gi|206591154|emb|CAQ56766.1| endonuclease/exonuclease/phosphatase protein [Ralstonia solanacearum MolK2] gi|206593706|emb|CAQ60633.1| endonuclease/exonuclease/phosphatase protein [Ralstonia solanacearum IPO1609] Length = 248 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 93/286 (32%), Gaps = 49/286 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----A 79 +R+ ++NI+ + +RQ +DADIVFLQE+ N A Sbjct: 4 LRVATYNIH----------KGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVA 53 Query: 80 VAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 P T + +T + + + H A+ + +L ++ + S Sbjct: 54 AELFDPSYTQLRYLATDVYPHTVYGRNAVYDHGHHGNAIMSRYPILLSENLDI-----SD 108 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R R + + ++ ++ +L H F +QA+ L + + Sbjct: 109 HRFEQRGLLHAVTDLGFGEVHLLCAHFGLF-------------ARSRQRQAEALIERVRS 155 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 + VP V+AGDFN N L + + + + + + + + Sbjct: 156 VVPTDVPLVVAGDFNDWNNRLD--RVICQALGATEVADKAAGAR--PLRTFPSHLPWLRL 211 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + +I + SDH P+ + Sbjct: 212 DRIYVRG-----------FDIERAHALTGRDWAQRSDHVPLLAELS 246 >gi|260575902|ref|ZP_05843897.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sp. SW2] gi|259021828|gb|EEW25129.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sp. SW2] Length = 353 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 36/349 (10%), Positives = 87/349 (24%), Gaps = 62/349 (17%) Query: 16 CTASVAQKVRLVSWNINTLSE----QEGVSLWKNSVKRTT----SDYTLLRQYAKNLDAD 67 A Q++R+ ++N+ + + R T + +DAD Sbjct: 3 TAAPAPQRLRIATYNVEWFNGLFDNHGHLLEDAEPSARYQVTRGEQLTAIAIVMTAMDAD 62 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 V + E N + R + + + Sbjct: 63 AVMVIEAPDTNGKRSSVKALERFAAHYGLRTSRAVTGFPSETEQEITLLYDPARLTPRHD 122 Query: 128 YPLLGAKDSFSRAGNRR-----------------------AVELLVEINGKKIWVLDIHL 164 + R + NG+ + ++ +H+ Sbjct: 123 PMGEPPGHNPVTDEPRFDGVFRYDLDTDATPETIRFSKPPLELAVTLANGRALRLIGVHI 182 Query: 165 KSFCFLDSLENT--YSPSCSLLSQQAQW---LKDWITQKKESLVPFVIAGDFNRKINYLG 219 KS + + +Q L+ + + ++ GDFN Sbjct: 183 KSKSPYGARGEAAITRLAIENRRKQLAQCVWLRRRVEGHLGAGESLIVLGDFNDGPGLDE 242 Query: 220 NNDDF----------------WKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPID 258 F + DP+ + + + A + +D Sbjct: 243 YERLFGHSGIEVVLGHDADPALQLYDPHARMALTQRMGMAATTARFYLAPQKRYFEALLD 302 Query: 259 YFVMDQNA----YKFLIQESFSEI-LYNEDDIKSRGKRLSDHCPISIDY 302 + ++ + + I ++ +++ SDH P+++D Sbjct: 303 FIMVSPDLVAAGPDWRIWHPLNDPGCLKVPELREALLAASDHFPVTLDL 351 >gi|254486528|ref|ZP_05099733.1| endonuclease/exonuclease/phosphatase [Roseobacter sp. GAI101] gi|214043397|gb|EEB84035.1| endonuclease/exonuclease/phosphatase [Roseobacter sp. GAI101] Length = 242 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 86/289 (29%), Gaps = 63/289 (21%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A+ +R+ S+NI K D + +DAD++ LQE Sbjct: 10 AAERHTIRVASYNIR-----------KAVGLDWRRDPHRIADVLAEVDADVIALQEADKR 58 Query: 78 -NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 A A V P + + S+ AI VR + + L Sbjct: 59 LGARAGVLPLQRLEAELGYRMVEVSMRPHSHGWQGNAILVRSHLRDYVAERISLPTM--- 115 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R AV + ++ +I L + L +Q L+ + Sbjct: 116 ----EPRGAVSVRLQEPELEIIGLHLGLTPGM---------------RRKQMLNLQKLMA 156 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN-LRNKI 255 +++ P ++AGDFN + P + + R Sbjct: 157 ERE---HPVLLAGDFNEW---------------NTGRMPFAPPSTVVTPGPSFHARRPSA 198 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +D FV+ + + + KR SDH PI +D F Sbjct: 199 QLDRFVLGPGL--RSVSSHVHQSPLS--------KRASDHLPIVVDIAF 237 >gi|152002409|gb|ABS19574.1| beta-hemolysin [Staphylococcus aureus] Length = 330 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 92/298 (30%), Gaps = 32/298 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++LVS N+ LS L+ N + +D Y K + D+V E A K Sbjct: 42 DLKLVSHNVYMLST----VLYPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDK 95 Query: 83 VFPKNTWCIFYSTE--------RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + Y T S +A+ K + + Sbjct: 96 LLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC 155 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 F N+ V +E NGK + V+ H +S DS + ++Q + + D+ Sbjct: 156 -GFDNDSNKGFVYTKIEKNGKNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDF 210 Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNAN 248 + + I GD N D K ++ ND L N Sbjct: 211 VKKKNIPKDETVYIGGDLNVN-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYN 269 Query: 249 KNLRNKIPIDYFVMDQNAYK--FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300 +DY D++ + L+ E +E D + SDH PI Sbjct: 270 YPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 327 >gi|57650692|ref|YP_186826.1| phospholipase C [Staphylococcus aureus subsp. aureus COL] gi|282894608|ref|ZP_06302836.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A8117] gi|130085|sp|P09978|PHLC_STAAU RecName: Full=Phospholipase C; AltName: Full=Beta-hemolysin; AltName: Full=Beta-toxin; AltName: Full=Sphingomyelinase; Short=SMase; Flags: Precursor gi|61213889|sp|Q5HEI1|PHLC_STAAC RecName: Full=Phospholipase C; AltName: Full=Beta-hemolysin; AltName: Full=Beta-toxin; AltName: Full=Sphingomyelinase; Short=SMase; Flags: Precursor gi|110815915|sp|Q2FWP1|PHLC_STAA8 RecName: Full=Phospholipase C; AltName: Full=Beta-hemolysin; AltName: Full=Beta-toxin; AltName: Full=Sphingomyelinase; Short=SMase; Flags: Precursor gi|46588|emb|CAA31769.1| unnamed protein product [Staphylococcus aureus subsp. aureus COL] gi|57284878|gb|AAW36972.1| phospholipase C [Staphylococcus aureus subsp. aureus COL] gi|269941409|emb|CBI49806.1| phospholipase C precursor (pseudogene) [Staphylococcus aureus subsp. aureus TW20] gi|282763095|gb|EFC03227.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A8117] gi|298695279|gb|ADI98501.1| beta-hemolysin [Staphylococcus aureus subsp. aureus ED133] gi|329731457|gb|EGG67820.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus 21193] Length = 330 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 92/298 (30%), Gaps = 32/298 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++LVS N+ LS L+ N + +D Y K + D+V E A K Sbjct: 42 DLKLVSHNVYMLST----VLYPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDK 95 Query: 83 VFPKNTWCIFYSTE--------RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + Y T S +A+ K + + Sbjct: 96 LLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC 155 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 F N+ V +E NGK + V+ H +S DS + ++Q + + D+ Sbjct: 156 -GFDNDSNKGFVYTKIEKNGKNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDF 210 Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNAN 248 + + I GD N D K ++ ND L N Sbjct: 211 VKKKNIPKDETVYIGGDLNVN-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYN 269 Query: 249 KNLRNKIPIDYFVMDQNAYK--FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300 +DY D++ + L+ E +E D + SDH PI Sbjct: 270 YPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 327 >gi|313667795|ref|YP_004048079.1| exodeoxyribonuclease III [Neisseria lactamica ST-640] gi|313005257|emb|CBN86690.1| exodeoxyribonuclease III [Neisseria lactamica 020-06] Length = 256 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 87/304 (28%), Gaps = 73/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + D++ LQE Sbjct: 1 MKITTWNVNSLN----------------VRLPQVQNLLADNPPDVLVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ + + + R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSR-----SAPEDVYIGLPALPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V++++ + LDS + Y Q L +++ + Sbjct: 90 RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRYG 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D ++K + + Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWYEKIHCSSVERQWFKNLLDLGLTDSLRQVHPEGAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ + L D +R SDH P++ Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMAEALKDV-------RVDLDTRALERPSDHAPVT 251 Query: 300 IDYD 303 ++D Sbjct: 252 AEFD 255 >gi|239999627|ref|ZP_04719551.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae 35/02] gi|240017251|ref|ZP_04723791.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae FA6140] gi|240081112|ref|ZP_04725655.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae FA19] gi|240118615|ref|ZP_04732677.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae PID1] gi|240124158|ref|ZP_04737114.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae PID332] gi|240126225|ref|ZP_04739111.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae SK-92-679] gi|240128828|ref|ZP_04741489.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae SK-93-1035] gi|254494342|ref|ZP_05107513.1| exodeoxyribonuclease III [Neisseria gonorrhoeae 1291] gi|268595439|ref|ZP_06129606.1| exodeoxyribonuclease III [Neisseria gonorrhoeae 35/02] gi|268597223|ref|ZP_06131390.1| exodeoxyribonuclease III [Neisseria gonorrhoeae FA19] gi|268604327|ref|ZP_06138494.1| exodeoxyribonuclease III [Neisseria gonorrhoeae PID1] gi|268682783|ref|ZP_06149645.1| exodeoxyribonuclease III [Neisseria gonorrhoeae PID332] gi|268684808|ref|ZP_06151670.1| exodeoxyribonuclease III [Neisseria gonorrhoeae SK-92-679] gi|268687210|ref|ZP_06154072.1| exodeoxyribonuclease III [Neisseria gonorrhoeae SK-93-1035] gi|293398467|ref|ZP_06642645.1| exodeoxyribonuclease III [Neisseria gonorrhoeae F62] gi|226513382|gb|EEH62727.1| exodeoxyribonuclease III [Neisseria gonorrhoeae 1291] gi|268548828|gb|EEZ44246.1| exodeoxyribonuclease III [Neisseria gonorrhoeae 35/02] gi|268551011|gb|EEZ46030.1| exodeoxyribonuclease III [Neisseria gonorrhoeae FA19] gi|268588458|gb|EEZ53134.1| exodeoxyribonuclease III [Neisseria gonorrhoeae PID1] gi|268623067|gb|EEZ55467.1| exodeoxyribonuclease III [Neisseria gonorrhoeae PID332] gi|268625092|gb|EEZ57492.1| exodeoxyribonuclease III [Neisseria gonorrhoeae SK-92-679] gi|268627494|gb|EEZ59894.1| exodeoxyribonuclease III [Neisseria gonorrhoeae SK-93-1035] gi|291610938|gb|EFF40035.1| exodeoxyribonuclease III [Neisseria gonorrhoeae F62] gi|317164881|gb|ADV08422.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae TCDC-NG08107] Length = 256 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 87/304 (28%), Gaps = 73/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + DI+ LQE Sbjct: 1 MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ ++V S R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIISRSVPQDVHF-----GLPSLPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V++++ + LDS + Y Q L +++ + Sbjct: 90 RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRHG 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D +++ + + Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWYEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ L D +R SDH P++ Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDV-------RIDLETRALERPSDHAPVA 251 Query: 300 IDYD 303 ++D Sbjct: 252 AEFD 255 >gi|156977170|ref|YP_001448076.1| hypothetical protein VIBHAR_05956 [Vibrio harveyi ATCC BAA-1116] gi|156528764|gb|ABU73849.1| hypothetical protein VIBHAR_05956 [Vibrio harveyi ATCC BAA-1116] Length = 317 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 93/309 (30%), Gaps = 30/309 (9%) Query: 24 VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + + N+ G S+ T + L+ DI+ LQE+ S Sbjct: 7 ITFATANLLNFVAPPGAYYDFENIYSLDDWQDKLTWTKSQFDQLNPDIIGLQEVFSIEET 66 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137 F + + + + + + A+A R ++ L D Sbjct: 67 QTFFAEIGYQ-YSACVDTPHIEGDYIYSRPVVAVASRFPIESFEAVTFDKDTLNAFGDID 125 Query: 138 SRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLD-------SLENTYSPSCSLLSQQAQ 189 + +R+ V + I V HLKS D S S +A Sbjct: 126 APPFSRKPVRATIIHPIIGHICVYVTHLKSQRPADSETPEQASRPIARWLSTQQRGWEAA 185 Query: 190 WLKDWITQKKESLV-PFVIAGDFNRKINYLGNNDDFWKTIDP--------NDSLIRFPKE 240 L+D + + + P ++ GD N+ I N+ + + ++ Sbjct: 186 MLRDAMQKHYANNPMPTLLMGDMNQAITKTSVNNVLVEQYGDSVTDLQLCDGWELQVAPS 245 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI------KSRGKRLSD 294 +SR + + +DY ++ Q Y D R K SD Sbjct: 246 LESRPATHYDFAKGNVLDYILLSQEFDAHADVSIAEVTNYQVLDTHLINPSFERDKNASD 305 Query: 295 HCPISIDYD 303 H +++ + Sbjct: 306 HAFVALTVE 314 >gi|241661977|ref|YP_002980337.1| endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12D] gi|240864004|gb|ACS61665.1| Endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12D] Length = 248 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 90/285 (31%), Gaps = 49/285 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA---V 80 +R+ ++NI+ + +RQ +DADIVFLQE+ N Sbjct: 4 LRVATYNIH----------KGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVA 53 Query: 81 AKVFPKNT---WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A++F N + + + H A+ + +L ++ + S Sbjct: 54 AELFDPNYTQLRYLATDVYPHTVYGRNAVYEHGHHGNAILSRFPILLSENLDI-----SD 108 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R R + + ++ ++ +L H F +QA+ L D + Sbjct: 109 HRFEQRGLLHAVTDLGFGEVHLLCAHFGLF-------------ARSRQRQAEALVDRVRS 155 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 P V+AGDFN N L + + + + + + + + Sbjct: 156 VVPPDAPLVVAGDFNDWNNRLD--RMICQALGATEVADKAADAR--PVRTFPSQMPWLRL 211 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D + +I + SDH P+ + Sbjct: 212 DRIYVRG-----------FDIERAHALTGREWAQRSDHVPLLAEL 245 >gi|54293632|ref|YP_126047.1| hypothetical protein lpl0685 [Legionella pneumophila str. Lens] gi|53753464|emb|CAH14919.1| hypothetical protein lpl0685 [Legionella pneumophila str. Lens] Length = 256 Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 81/305 (26%), Gaps = 76/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +L SWN+N+L + Q+ ++ D++ +QE Sbjct: 2 FKLASWNVNSL----------------KVRLEQVLQWLESSQVDVLAMQET--------- 36 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + S + +A+ + + R Sbjct: 37 -KLTDENFPVVSFTDKGYHVIFSGQKTYNGVAIISRYPMT------DIQTDIPELEDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V K I ++++++ + L S + Y + +I + Sbjct: 90 RILAATV----KGIRLINLYVPNGGELTSDKYQYKLD------WLNKVTRFIQHEISIYS 139 Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + GDFN F K ++ L + A Sbjct: 140 KVAVVGDFNIAPEDRDVHDPVEWEGCVLVSPPERQAFMKILELG--LHDSFRNFAQEEKA 197 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ Q D + +R SDH P+ Sbjct: 198 FSWWDYRAAAFRRNRGLRIDHVLLSHELNALCRQS-------KIDKEPRKAERPSDHAPV 250 Query: 299 SIDYD 303 ++ + Sbjct: 251 WVELE 255 >gi|114330240|ref|YP_746462.1| exodeoxyribonuclease III Xth [Nitrosomonas eutropha C91] gi|114307254|gb|ABI58497.1| Exodeoxyribonuclease III [Nitrosomonas eutropha C91] Length = 254 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 33/303 (10%), Positives = 81/303 (26%), Gaps = 74/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + + D++ LQE + Sbjct: 1 MKIATWNVNSL----------------KVRLQQVIDWLNVNQPDVLCLQETKLQDEF--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ K V A F R Sbjct: 42 -------FPVDELAQAGYQSIYAGQKTYNGVALLSKVTGVDV-----CAALPDFDDPQKR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++ +++ + +DS + Y + L ++ Q++ Sbjct: 90 L-----IAATYGDLRIICVYVPNGERVDSEKYAYK------LRWLSILNSFLQQERTRYG 138 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 + GDFN D ++ + + F + Sbjct: 139 KVALLGDFNIAPEDRDVYDPEAWKGQVLCSEAERQAFRGLLDTGFVDSF-HLFEQPEKIY 197 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ++ ID+ ++ + D + +R SDH P+ Sbjct: 198 TWWDYRMMAFRRNRGLRIDHILLSHETADSCA-------TWQVDKAPRKLERPSDHAPVW 250 Query: 300 IDY 302 ++ Sbjct: 251 VEL 253 >gi|72160662|ref|YP_288319.1| exodeoxyribonuclease III [Thermobifida fusca YX] gi|71914394|gb|AAZ54296.1| Exodeoxyribonuclease III [Thermobifida fusca YX] Length = 264 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 39/302 (12%), Positives = 82/302 (27%), Gaps = 64/302 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N + + + + D D+V LQE + Sbjct: 1 MRLATWNVN----------------SVRARSERIAAWLRRSDVDVVALQETKCRDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + Q +G Sbjct: 41 ------QFPTAVFTELGYEVAHHGLSQWNGVAIASRVGLSDVQ----IGFPGQPGWGEPE 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + + V +++ + +D TY ++A W++ ++ Sbjct: 91 EAEARAISAVCGGVRVWSLYVPNGREIDHPHYTYKLQWLARLREAGE--AWLS--EDPKA 146 Query: 204 PFVIAGDFNRKINYL----------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + GD+N D F +D + + P Sbjct: 147 QIALCGDWNIAPYDEDVWDMAEFEGRTHVTKPERDAFHAVVDAGFTDVVRPHAPGPGVYT 206 Query: 248 NKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + R + ID+ + + D + +GK SDH P+ Sbjct: 207 YWDYKGLAFPKRKGMRIDFILASPALAERATDA-------KIDREERKGKGASDHAPVIA 259 Query: 301 DY 302 D+ Sbjct: 260 DF 261 >gi|82751595|ref|YP_417336.1| beta-hemolysin [Staphylococcus aureus RF122] gi|82657126|emb|CAI81563.1| beta-hemolysin [Staphylococcus aureus RF122] Length = 330 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 92/298 (30%), Gaps = 32/298 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++LVS N+ LS L+ N + +D Y K + D+V E A K Sbjct: 42 DLKLVSHNVYMLST----VLYPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDK 95 Query: 83 VFPKNTWCIFYSTE--------RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + Y T S +A+ K + + Sbjct: 96 LLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC 155 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 F N+ + +E NGK + V+ H +S DS + ++Q + + D+ Sbjct: 156 -GFDNDSNKGFIYTKIEKNGKNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDF 210 Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNAN 248 + + I GD N D K ++ ND L N Sbjct: 211 VKKKNIPKDETVYIGGDLNVN-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYN 269 Query: 249 KNLRNKIPIDYFVMDQNAYK--FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300 +DY D++ + L+ E +E D + SDH PI Sbjct: 270 YPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 327 >gi|213963771|ref|ZP_03392020.1| endonuclease/Exonuclease/phosphatase family protein [Capnocytophaga sputigena Capno] gi|213953547|gb|EEB64880.1| endonuclease/Exonuclease/phosphatase family protein [Capnocytophaga sputigena Capno] Length = 348 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 44/348 (12%), Positives = 92/348 (26%), Gaps = 55/348 (15%) Query: 1 MIRKYVL--ALVFFLVPCTASVAQKV---RLVSWNINTLSE--QEGVSLWKNSVKRTTSD 53 M R L +LV V + +K + +N+ L + + + Sbjct: 1 MKRIVTLTVSLVLLAVLNAEAQQKKFSVRTIAFYNVENLFDTINDPNKFDDDRTPEGADR 60 Query: 54 Y---------TLLRQYAKN-------LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER 97 + + + DIV L E+ + V + + Sbjct: 61 WTSKVYNDHVQKIAKVISEIGNDVTHHAPDIVGLAEIENEAVVQDLINTEYLKRY---NY 117 Query: 98 LINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKDSFSRAGNRRAVELLVEINGKK 156 I H + + A+ +K + + ++PL KD R + + E++G+ Sbjct: 118 GIVHYESPDARGVDVALIYKKGVFKPISSFAHPLHLTKDDGKPLYTRDQLLVSGELDGEM 177 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216 I + H S ++ + L++Q + + + + GDFN Sbjct: 178 IHFIVNHWPSRLGGEAKSRPSREKAAALNKQI--IDSLLKT--DPNAKVIAMGDFNDDPI 233 Query: 217 YLGNNDDFWKT-----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 G + + P + D F + K Sbjct: 234 NSGFKNVLKTKDKKEDVKPGELFNPMEAMLKKGMGTLAYQDGWNLFDQFYFTYDLLKEDK 293 Query: 272 QE-------------------SFSEILYNEDDIKSRGKRLSDHCPISI 300 + + + SDH P+ + Sbjct: 294 SSYRYWKTGIFNRPYLANPKGRYKGYPFRSMSNGNYTWGYSDHFPVYM 341 >gi|325922786|ref|ZP_08184516.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865] gi|325546728|gb|EGD17852.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865] Length = 305 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 54/290 (18%), Positives = 91/290 (31%), Gaps = 36/290 (12%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 V +V +++ LV+ N++ E + + + K L D++ LQ Sbjct: 42 AVQSPGAVQREMTLVTLNLHHDRED------------WPARRAYIAKQLKQLAPDVIALQ 89 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ V + W S A+ + + L Sbjct: 90 EVIERRG--SVENQAAWLARKLGYEYTFASVDPVGAAKRYGNALLSRRNVLAMHQRLLQP 147 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 D R A L V+++G+ + V HL E + + ++Q L Sbjct: 148 LDDY------RVAAHLQVDVDGQPVNVYVTHLN--------ERADARGTATRTRQVADLL 193 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 D+I + P VIAGDFN + L D S+ R S N + Sbjct: 194 DFIASNSDQ-APVVIAGDFNTAADALDLEALRKGYGDSYGSVHRNSDATVSTLNLHV-FD 251 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ QN + Y + G+ SDH + + Sbjct: 252 KPARIDHVFFQQNRLLAREARILFDAPY------AEGRWASDHYGVWVRL 295 >gi|21231641|ref|NP_637558.1| hypothetical protein XCC2202 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768237|ref|YP_242999.1| hypothetical protein XC_1916 [Xanthomonas campestris pv. campestris str. 8004] gi|21113335|gb|AAM41482.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573569|gb|AAY48979.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 253 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 89/281 (31%), Gaps = 36/281 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + LV+ N++ E + + + K L D++ LQE+ V Sbjct: 1 MTLVTLNLHHDRED------------WPARRAYIAKELKQLAPDVIALQEVIERRG--SV 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + W S A+ K + Q L D R Sbjct: 47 ENQAAWLASRLGYAYTFASVDPPGAPKRYGNALLSKRSVLAQHQRLLQPLDDY------R 100 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A L V+++G+ + V HL E + + + ++Q L D+I + Sbjct: 101 VAAHLQVDMDGQPVNVYVTHLN--------ERSDARGAATRTRQVADLLDFIASN-SNQA 151 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 P VIAGDFN + L D S+ R S N + ID+ Sbjct: 152 PVVIAGDFNTAADTLDLEALRKGYGDSYGSVHRNSDATVSTLNLHV-FDKPARIDHVFFQ 210 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 QN + Y E G+ SDH + + F Sbjct: 211 QNRLLAREARILFDTPYAE------GRWASDHYGVWVRLQF 245 >gi|261880007|ref|ZP_06006434.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] gi|270333323|gb|EFA44109.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] Length = 341 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 86/303 (28%), Gaps = 48/303 (15%) Query: 1 MIRKYVLALVFFLVPCTASVAQK-VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 MI K + L +AQK + L+++NI + + + + Sbjct: 1 MIYKRLFLFPLLLCAMLTMMAQKNITLMTYNIKGGGMTD-------------TRLQNIAK 47 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 K D+V +QE+ + +F + + + + + R++ Sbjct: 48 VIKYNQPDVVAVQEVDNRML--GIFRHDYLKDLATATDMKYTFHPLVSKVYGIGLLFREE 105 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 + V +++P +R + K + + H ++ Sbjct: 106 PISVEPKTFPRGANSK---DREDRGIIIAEF----KDYYFIGTHYPLDDIDRDQITSWII 158 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 S + + P +AGDFN K NY + + Sbjct: 159 SFAKR----------------AGTPVFVAGDFNAKPNYRAMRTFTNNGFKILNDV----- 197 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID + +A + + S + + SDH P+ Sbjct: 198 ----NQYTYPSDNPTGCIDMILFYDSAEEEKYEVEDSGVAPSGGVNIKSQSETSDHLPVF 253 Query: 300 IDY 302 + Sbjct: 254 VQL 256 >gi|162456399|ref|YP_001618766.1| exodeoxyribonuclease III [Sorangium cellulosum 'So ce 56'] gi|161166981|emb|CAN98286.1| exodeoxyribonuclease III [Sorangium cellulosum 'So ce 56'] Length = 269 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 83/304 (27%), Gaps = 73/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ SWN+N + L + D+V +QE + + Sbjct: 1 MRIASWNVN----------------SIRTRLEQLTSWLVRAAPDVVCMQETKVEDGSFPE 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + +A+ + + D + Sbjct: 45 AALSEVGYRSVI------------FGQKSYNGVAIATRFGL---SVDDVKKGLDGDEQDV 89 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 RR + +E I V+++++ + + + Y + + L+ + + Sbjct: 90 ARRMLAATIE----GIRVINVYVPNGQAVGTPAFAYKLA------WLERLRSELEARYRP 139 Query: 202 LVPFVIAGDFNRKI---NYLGNNDDFWKTIDPNDSLIRFPKEKDSR-------CNA---- 247 +I GDFN + + + D + + C+ Sbjct: 140 DQQIMICGDFNVAPEAIDVAEPKKWEGQVLFHPDERAALGRLMEWGLVDAFRACHPAKEA 199 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ++ ID ++ + S D +R SDH P+ Sbjct: 200 YSWWDYRMGAFRRNKGLRIDLALVTRPLAARCTDVSI-------DTRPRELQRPSDHAPV 252 Query: 299 SIDY 302 ++ Sbjct: 253 VVEI 256 >gi|91781292|ref|YP_556499.1| hypothetical protein Bxe_C1289 [Burkholderia xenovorans LB400] gi|91693952|gb|ABE37149.1| Conserved hypothetical protein [Burkholderia xenovorans LB400] Length = 290 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 85/313 (27%), Gaps = 58/313 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 +RLV WNI +G + + + A+ L D D++ +QE+ Sbjct: 1 MRLVDWNIQWGCGVDG-----------RVELGRIVREARKLCDFDVMCVQEITRGFNEEP 49 Query: 75 --------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 S + A++ S S A+ + Sbjct: 50 AAGGLKGQPSSDQFAELAGLLPEMTVIDAIGSDLPSIGASPRRRQFGNAIVTRLPVRQVL 109 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 + L D + R A+E +++ + + V+ HL+ + + L + Sbjct: 110 RHSLPWPADPAKPSMLRIALEAVLDADIGPLRVISTHLEFYS--EKQRLAQVARLRELHR 167 Query: 187 QAQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 +A + ++ PF + GDFN + D + Sbjct: 168 EACDHARFPASAEKPDSPFAGTARPLGAIFCGDFNSAFDGAAYRRMLEPVADAPSFADAW 227 Query: 238 PKEKDSRCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 A D+ + +N + Sbjct: 228 SCAHPGEPRAATVGLYDREQWPDGPFACDFIFVTENLTPRVAACEV-----------DPH 276 Query: 290 KRLSDHCPISIDY 302 R SDH P+ ++ Sbjct: 277 SRASDHQPLWLEL 289 >gi|329956847|ref|ZP_08297415.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides clarus YIT 12056] gi|328523604|gb|EGF50696.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides clarus YIT 12056] Length = 370 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 36/354 (10%), Positives = 95/354 (26%), Gaps = 63/354 (17%) Query: 5 YVLALVFFLVPCTASV--------AQKVRLVSWNINTLSEQEGVSLWKNSV--------- 47 ++L + AS R++ +N+ L + +L + Sbjct: 22 LFISLSALTLLTFASSLYGQTKKDTLTFRVMGYNVENLFDCRHDTLKNDYEFLSDAVRHW 81 Query: 48 --KRTTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH 101 + + + + +V L E+ + + + + + + + Sbjct: 82 NYSKYKKKLDAVARVIIAVGEWSPPALVALCEVENDSVLRDL---TRYSVLREADYRYVI 138 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVL 160 + I+ A+ ++ ++L + +R R + + + +N + V Sbjct: 139 THSPDERGINVALLYQRGLFKLLSGQSYSVTKAHKSNR-PTRDILHVSGLLLNKDTLDVF 197 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 +H S Y S + ++ + + ++ GDFN Sbjct: 198 VVHFPSRSGGAKASEPYRLSAAQRLKEVTDSLFRVRTHPQ----IIVMGDFNDYPCNKSV 253 Query: 221 NDDFWKTIDPNDSLIRFPKE----------KDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 + P ++ + D + K +D+ ++ N Sbjct: 254 QKILRAGVPPIEADSSDTRALYHLLARKNIADKHFGSYKYQGEWGLLDHIILSGNLLITD 313 Query: 271 IQESFSEI---------------------LYNEDDIKSRGKRLSDHCPISIDYD 303 S +E + SDH P+ ++ Sbjct: 314 SPLSTAEAKAGIFSAPFLLTEDKKYGDSQPFRTYYGMKYQAGYSDHLPVWAEFT 367 >gi|300508421|pdb|3I41|A Chain A, Crystal Structure Of Beta Toxin From Staphylococcus Aureus F277a, P278a Mutant gi|300508422|pdb|3I41|B Chain B, Crystal Structure Of Beta Toxin From Staphylococcus Aureus F277a, P278a Mutant gi|300508423|pdb|3I46|A Chain A, Crystal Structure Of Beta Toxin From Staphylococcus Aureus F277a, P278a Mutant With Bound Calcium Ions gi|300508424|pdb|3I46|B Chain B, Crystal Structure Of Beta Toxin From Staphylococcus Aureus F277a, P278a Mutant With Bound Calcium Ions gi|300508425|pdb|3I48|A Chain A, Crystal Structure Of Beta Toxin From Staphylococcus Aureus F277a, P278a Mutant With Bound Magnesium Ions gi|300508426|pdb|3I48|B Chain B, Crystal Structure Of Beta Toxin From Staphylococcus Aureus F277a, P278a Mutant With Bound Magnesium Ions Length = 317 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 87/298 (29%), Gaps = 32/298 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++LVS N+ LS L+ N + +D Y K + D+V E A K Sbjct: 29 DLKLVSHNVYMLST----VLYPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDK 82 Query: 83 VFPKNTWCIFYSTE--------RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + Y T S +A+ K + + Sbjct: 83 LLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC 142 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 F N+ V +E NGK + V+ H +S DS + ++Q + + D+ Sbjct: 143 -GFDNDSNKGFVYTKIEKNGKNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDF 197 Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNAN 248 + + I GD N D K ++ ND L N Sbjct: 198 VKKKNIPKDETVYIGGDLNVN-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYN 256 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPISI 300 +DY D++ + + + SDH PI Sbjct: 257 YPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAAAYYYVYNDFSDHYPIKA 314 >gi|229515240|ref|ZP_04404700.1| exodeoxyribonuclease III [Vibrio cholerae TMA 21] gi|229520320|ref|ZP_04409746.1| exodeoxyribonuclease III [Vibrio cholerae TM 11079-80] gi|229342686|gb|EEO07678.1| exodeoxyribonuclease III [Vibrio cholerae TM 11079-80] gi|229347945|gb|EEO12904.1| exodeoxyribonuclease III [Vibrio cholerae TMA 21] Length = 268 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 83/311 (26%), Gaps = 76/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++S+NIN L + L+ D++ LQE + Sbjct: 1 MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEAFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +++ H +A+ K V + G Sbjct: 45 QEVEAMGYQVYFH------------GQKAHYGVAILCKQTPVEV----IKGFPTDNEEHQ 88 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + NG+K +L+ F + Q + L ++ + + + Sbjct: 89 KRMIMATFADQNGQKTTILN-----GYFPQGDNVEHETKFPYKRQFYRDLMTYLCEHRSN 143 Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240 V+ GD N ++ ++ +T+ + F + Sbjct: 144 SERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSFQPEEREWLQTLLDWGLVDTFRQL 203 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + + + D + Sbjct: 204 HPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLAETCQEAGI-------DYELRAIDK 256 Query: 292 LSDHCPISIDY 302 SDH PI + Sbjct: 257 PSDHAPIWATF 267 >gi|218705247|ref|YP_002412766.1| exonuclease III [Escherichia coli UMN026] gi|293405248|ref|ZP_06649240.1| exodeoxyribonuclease III [Escherichia coli FVEC1412] gi|298380891|ref|ZP_06990490.1| exodeoxyribonuclease III [Escherichia coli FVEC1302] gi|218432344|emb|CAR13234.1| exonuclease III [Escherichia coli UMN026] gi|291427456|gb|EFF00483.1| exodeoxyribonuclease III [Escherichia coli FVEC1412] gi|298278333|gb|EFI19847.1| exodeoxyribonuclease III [Escherichia coli FVEC1302] gi|323186929|gb|EFZ72247.1| exodeoxyribonuclease III [Escherichia coli RN587/1] Length = 268 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 82/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSTLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKREN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + + F Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + ++ D ++ S Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|187932631|ref|YP_001886154.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum B str. Eklund 17B] gi|187720784|gb|ACD22005.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum B str. Eklund 17B] Length = 258 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 90/291 (30%), Gaps = 46/291 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+ + + R L+ D DI+ QE Sbjct: 1 MKVMTFNLRCDF-------FMDFKNRWDERRNLVFDIVNKYDCDIIGTQEATEKMFNDIS 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS-----FS 138 + + I + S I + KK+ +++ L D + Sbjct: 54 NNIDAFNIIGNPRSKKLFS-------ERNDILISKKHKVNDYRTFWLRDNYDKIGRSKWY 106 Query: 139 RAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT- 196 R ++E+ N K+I + + HL + + + L ++I Sbjct: 107 SMFPRICTTAIIELENSKRIRICNSHLDFLLP------------QARAYELKKLSEFIKK 154 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE----KDSRCNANKNLR 252 ++++ +P +I GDFN N + I + + KN Sbjct: 155 EQEKEDLPLIIMGDFNSNPNSKLIKNFTSGNIFNKRLVAVQDMNKELYTKATMGHFKNKE 214 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY + + F I GK SDH P+ + + Sbjct: 215 KGSHIDYIFVSEE---------FEIIDVEIVKYNVNGKYPSDHYPLMAEIN 256 >gi|83944983|ref|ZP_00957349.1| exodeoxyribonuclease III [Oceanicaulis alexandrii HTCC2633] gi|83851765|gb|EAP89620.1| exodeoxyribonuclease III [Oceanicaulis alexandrii HTCC2633] Length = 269 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 82/306 (26%), Gaps = 66/306 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L +WNIN + + K D++ LQE+ + Sbjct: 3 PFTLATWNIN----------------SVRLRAPHVASFVKEAQPDVIALQEI---KCLPD 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP+ + + +A+ + L + Sbjct: 44 QFPRKEFE------EMGFPHLHIVGQKGLHGVAIASRTPIEPLDQDKLCPRGE------- 90 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 A V +NG ++ + D + +P + + + LK + + + Sbjct: 91 --ARFQRVRVNGVELQ----NYYIPAGGDEPDPEINPRFAHKLEFLERLKGYAADRAKEN 144 Query: 203 VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P V+ GDFN + + ++ + + + D Sbjct: 145 APLVLVGDFNIAPREHDVWSHKQLLKVVSHTPVEVEALNAWLEAGEYIDVARELIDEPEK 204 Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ + +++ + D ++ SDH Sbjct: 205 LFTWWSYRSKDWRASNRGRRLDHIWVSPALKDAALKDG--RDSFRIWDNARDWEKPSDHA 262 Query: 297 PISIDY 302 P+++ Sbjct: 263 PVTLRL 268 >gi|107029003|ref|YP_626098.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU 1054] gi|116689839|ref|YP_835462.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia HI2424] gi|105898167|gb|ABF81125.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU 1054] gi|116647928|gb|ABK08569.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia HI2424] Length = 284 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 83/307 (27%), Gaps = 52/307 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 +RL+ WNI + +GV D + L D D++ LQE+ Sbjct: 1 MRLIDWNIQWGRDADGV-----------VDLPRTVAAIRRLGDFDVLCLQELTRGFDALS 49 Query: 75 --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + A++ + R A+ + L Sbjct: 50 GRPGPDQFAELAALLPGYTIVDAIGADLPAIRPGAPRRQFGNAIATRLPVGRVLRQSLPW 109 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 D+ + + R A+++ ++ + + V+ HL+ + + ++A Sbjct: 110 PADAGAPSMPRVALDIELQASFGSLRVVTTHLEYYSARQ--RLAQVDALRDRHREACAHA 167 Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 D + PF ++ GDFN + D + + Sbjct: 168 DRPAPAETPEGPFSATGQPRDAIVCGDFNSAFDSDAYRRLLEPIADAPGFVDAWIARHPG 227 Query: 244 RCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + D+ + +I R SDH Sbjct: 228 HTPPPTAGIYDTVQWSDGPLACDFVFVTDTLLPRVIGCEI-----------DGDVRASDH 276 Query: 296 CPISIDY 302 P+ ++ Sbjct: 277 QPVLLEL 283 >gi|156973843|ref|YP_001444750.1| exonuclease III [Vibrio harveyi ATCC BAA-1116] gi|156525437|gb|ABU70523.1| hypothetical protein VIBHAR_01553 [Vibrio harveyi ATCC BAA-1116] Length = 268 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 82/309 (26%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K + Q G R Sbjct: 42 -------FPIEDVEAMGYKVYFHGQKAHYGVAMLCKQEPISVQK----GFPTDNEEHQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+K+ VL+ F + Q + L ++ + Sbjct: 91 MIMATFEDENGEKVTVLN-----GYFPQGDNIAHETKYPYKRQFYKDLMTYLNDHHTNDE 145 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ KT+ F Sbjct: 146 QLIVMGDINISPIDSDIGIGEPNRKRWLKTGKCSFQPEEREWLKTLLDWGFEDTFRNLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID ++ + K ++ + D ++ S Sbjct: 206 EVNDRFSWFDYRSRGFDDNRGLRIDVILVTPSLAKKCVES-------DIDYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|152984142|ref|YP_001348052.1| exonuclease III [Pseudomonas aeruginosa PA7] gi|150959300|gb|ABR81325.1| exodeoxyribonuclease III [Pseudomonas aeruginosa PA7] Length = 270 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 77/311 (24%), Gaps = 74/311 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L + D++ LQE Sbjct: 1 MKIVSFNINGL----------------RARPHQLAALIERHQPDVIGLQE---TKVADDQ 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + + H +A+ + + G + R Sbjct: 42 FPQ-------AEIEALGYHVHYHGQKGHYGVALLSRQAPLELHR----GFPSDGEESQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + G + V++ F + + L+ + + Sbjct: 91 FIWGTFADAQGNPLTVMN-----GYFPQGENRDHPTKFPAKQRFYADLQLLLENSFKPEQ 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 V+ GD N ++L ++ T+ + F Sbjct: 146 ALVVMGDINISPEDCDIGIGEENRKRWLKTGKCSFLPEEREWLATLKNWGLVDSFRALNP 205 Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + + D ++ Sbjct: 206 EVTDRFSWFDYRSRGFEDTPKRGLRIDVILASRALQSRFRDAGI-------DYDLRGMEK 258 Query: 292 LSDHCPISIDY 302 SDH PI ++ Sbjct: 259 PSDHAPIWLEL 269 >gi|17546312|ref|NP_519714.1| exodeoxyribonuclease III protein [Ralstonia solanacearum GMI1000] gi|17428609|emb|CAD15295.1| probable exodeoxyribonuclease III protein [Ralstonia solanacearum GMI1000] Length = 269 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 96/303 (31%), Gaps = 61/303 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+L + + + +D T + D++ LQE+ Sbjct: 1 MRVATWNVNSL--KVRLPHVLQWLGEREADATPI---------DLLCLQELK-------- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P + + + ++ + + +A+ + + + + D + Sbjct: 42 LPDDRYP--LAELEAAGYASLFTGQKTYNGVAILARKAAMPEGRDVVRNIPDFAD--EQQ 97 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R V ++ G + V+ + + LDS + Y + L+DW+ + + Sbjct: 98 RVVAATYDVAGGPVRVISAYFPNGQALDSDKMVYK------MRWLAALQDWLQAEMAAHP 151 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GDFN + ++ ++ + F + Sbjct: 152 RLMLLGDFNIAPDDRDVHDPKKWEGMNLVSPEERAAFRALESAGLVDAFRMFEQED-KLF 210 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID+ ++ N + D + ++ SDH P+ Sbjct: 211 SWWDYRLFAFRRNAGLRIDHILLSPNLARLCESCHI-------DRVPRGWEQPSDHTPVV 263 Query: 300 IDY 302 Sbjct: 264 AAL 266 >gi|312881205|ref|ZP_07741003.1| exonuclease III [Vibrio caribbenthicus ATCC BAA-2122] gi|309371097|gb|EFP98551.1| exonuclease III [Vibrio caribbenthicus ATCC BAA-2122] Length = 268 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 84/309 (27%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQAVIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K + Q G R Sbjct: 42 -------FPLEDVEAMGYKVYFHGQKAHYGVAMLCKKEPISVQK----GFPTDNDDHQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + NG+K+ VL+ F + Q + L ++ + Sbjct: 91 MIMVTMEDDNGEKVTVLN-----GYFPQGDNIEHETKYPYKRQFYKDLMTYLNDHHTNDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ ++ KT+ + F + Sbjct: 146 QLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSFQPEEREWLKTLLDWGLVDTFRQIHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + + + D ++ S Sbjct: 206 EVEDRFSWFDYRSRGFDDNRGLRIDVVLATPKLAEKCTES-------DIDYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|227355788|ref|ZP_03840181.1| exodeoxyribonuclease III [Proteus mirabilis ATCC 29906] gi|227164107|gb|EEI49004.1| exodeoxyribonuclease III [Proteus mirabilis ATCC 29906] Length = 268 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 78/309 (25%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP T + + H +A+ K V + R Sbjct: 42 FP-------LETVSALGYHVFYHGQKGHYGVALLTKAKPVAVRK-----GFPGDGEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + +E + V++ F + ++ L+ ++T Sbjct: 90 RMIMADIETPAGLLTVMN-----GYFPQGESRDHETKFPAKAKFYADLQQYLTTSLTPSS 144 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N ++ T+ + + Sbjct: 145 PVLIMGDLNISPTDKDIGIGENNMKRWLKMGKCSFLPEEREWLATLMGWGLTDTYRAQHP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 N + ID + + I D ++ S Sbjct: 205 EVENQFSWFDYRSKGFDDNRGLRIDLLLASRCLADNCISTGI-------DYDIRAMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ ++ Sbjct: 258 DHAPVWAEF 266 >gi|167763327|ref|ZP_02435454.1| hypothetical protein BACSTE_01701 [Bacteroides stercoris ATCC 43183] gi|167698621|gb|EDS15200.1| hypothetical protein BACSTE_01701 [Bacteroides stercoris ATCC 43183] Length = 372 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 36/349 (10%), Positives = 90/349 (25%), Gaps = 62/349 (17%) Query: 8 ALVFFLVPCTASVAQ-------KVRLVSWNINTLSEQEGVSLWKNSV-----------KR 49 AL+ +A + R++ +N+ L + +L + + Sbjct: 28 ALMLLAFLTSAPLHGQEKKDTLTFRIMGYNVENLFDCRHDTLKNDRDFLPDAVRRWNYTK 87 Query: 50 TTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105 + + +V L E+ + + + + + + + Sbjct: 88 YKKKLNAIARVIIAAGKWTPPALVALCEVENDSVLRDL---TRYSVLREAGYRYVITHSP 144 Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHL 164 I+ A+ ++ ++L K + R + + ++ N + V +H Sbjct: 145 DERGINVALLYQRGIFKLLSNR-SYPVMKPRRNNRPTRDILHVSGQLLNSDTLDVFVVHF 203 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 S Y + + + I + + +I GDFN + Sbjct: 204 PSRSGGAKASEPYRLAAAQRLKDTTDSLLRIRTRPQ----IIIMGDFNDYSDNKSIQKIL 259 Query: 225 WKT--------IDPNDSLIRFPKEKDSR--CNANKNLRNKIPIDYFVMDQNAY------- 267 +D ++ + K +D+ ++ N Sbjct: 260 KAGIPPTETDSLDSRTLYHLLARKGIDNKHFGSYKYQGEWGLLDHIILSGNLLMPGSPLY 319 Query: 268 -KFLIQESFS-------------EILYNEDDIKSRGKRLSDHCPISIDY 302 F E + SDH P+ ++ Sbjct: 320 TAEEKAGVFRAPFLLTEDRKYGDEQPFRTYYGMKYQGGYSDHLPVWAEF 368 >gi|62179894|ref|YP_216311.1| exonuclease III [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127527|gb|AAX65230.1| exonuclease III, may repair singlet oxygen induced lesions [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322714361|gb|EFZ05932.1| exonuclease III [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 268 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 80/310 (25%), Gaps = 75/310 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE ++ Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKRQPDVIGLQE---TKVHDEM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKATPISVRR-----GFPDDGEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + I V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSPLGNITVIN-----GYFPQGESRDHPLKFPAKAQFYQNLQNYLETELKCNN 144 Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 P +I GD N + + + + F + Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMSRLLK-WGLVDTFRQAN 203 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID + + + D ++ Sbjct: 204 PQTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAERCAETGI-------DYDIRSMEKP 256 Query: 293 SDHCPISIDY 302 SDH P+ + Sbjct: 257 SDHAPVWATF 266 >gi|282863431|ref|ZP_06272490.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE] gi|282561766|gb|EFB67309.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE] Length = 285 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 91/310 (29%), Gaps = 58/310 (18%) Query: 9 LVFFLVPCTASVAQ-----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 L+ A A+ +R+ ++NI+ + +GV D + Sbjct: 16 LLATAFAPPAGAAERGHVVPLRVATYNIHAGAGMDGVF-----------DLDRQAAQLRA 64 Query: 64 LDADIVFLQEMGSYNAVA--------KVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAI 114 L AD++ LQE+ ++ ++ + + ++ ++ + A+ Sbjct: 65 LGADVIGLQEVDAHWGARSEWRDLASELAERLHMNVSFAPVYSLDPVAVGEPRREFGVAV 124 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV-ELLVEINGKKIWVLDIHLKSFCFLDSL 173 R + + L +D E+L+ + G + V HL Sbjct: 125 LSRYRILDAENHEITRLSTQDPDPVPAPAPGFGEVLLRVRGLPVRVYVTHL--------- 175 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 Y P S+ + Q + + + + ++ GDFN + WK + D Sbjct: 176 --DYRPDPSVRTVQVAETRRIMARDRGHR---ILLGDFNATPD-APELAPLWKELTDADP 229 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 ID+ + + + S Sbjct: 230 ----------GAPTFPAADPVNRIDFVAVSK--AGRTGAGQVRVREAAVAETL-----AS 272 Query: 294 DHCPISIDYD 303 DH P+ D + Sbjct: 273 DHRPLVADLE 282 >gi|237815303|ref|ZP_04594301.1| exodeoxyribonuclease III (xth) [Brucella abortus str. 2308 A] gi|237790140|gb|EEP64350.1| exodeoxyribonuclease III (xth) [Brucella abortus str. 2308 A] Length = 284 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 91/315 (28%), Gaps = 69/315 (21%) Query: 13 LVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 +PC A +++ +WNIN + L+ + + DIV Sbjct: 12 CLPCPARAHNHYGMKIATWNIN----------------SVKARIDNLQHWLRESSPDIVC 55 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 LQE+ S + + + +A+ K Sbjct: 56 LQEIKSVDE----------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLP 105 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 D +R +E + + + V+ ++L + +D+ + Y S Q Sbjct: 106 GDDSDEQARF-----IEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQR 154 Query: 191 LKDWITQKKESLVPFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIR 236 L++W ++ P V+AGD+N + + N Sbjct: 155 LENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTD 214 Query: 237 FPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + + ID+ ++ A I + + + Sbjct: 215 AIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------R 267 Query: 288 RGKRLSDHCPISIDY 302 ++ SDH P+++ Sbjct: 268 AWEKPSDHVPVTVTL 282 >gi|89072737|ref|ZP_01159302.1| putative exodeoxyribonuclease III [Photobacterium sp. SKA34] gi|89051557|gb|EAR57011.1| putative exodeoxyribonuclease III [Photobacterium sp. SKA34] Length = 268 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 86/306 (28%), Gaps = 72/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ + D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQALIEKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K + Q G A R Sbjct: 42 -------FPLADVEAMGYKVYFHGQKAHYGVAMLCKQEPISVQK----GFPTDDENAQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +GK I V++ F + + L +++ + Sbjct: 91 MIMATFKQDSGKNITVMN-----GYFPQGDNIKHETKFPAKEKFYADLMNYLNTAHTNDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ ++ +T+ F + Sbjct: 146 ELIVMGDINISPMDLDIGIGPANAKRWLKTGKCSFQPIEREWLQTLLDWGFTDTFRQLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + + ID + + + I+ + D ++ S Sbjct: 206 TVDDKYSWFDYRSKGFVDNRGLRIDVILATPSLAERCIES-------DVDYELRGIEKPS 258 Query: 294 DHCPIS 299 DH PI Sbjct: 259 DHAPIW 264 >gi|261378301|ref|ZP_05982874.1| exodeoxyribonuclease III [Neisseria cinerea ATCC 14685] gi|269145396|gb|EEZ71814.1| exodeoxyribonuclease III [Neisseria cinerea ATCC 14685] Length = 256 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 86/304 (28%), Gaps = 73/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + D++ LQE Sbjct: 1 MKITTWNVNSLN----------------VRLPQVQNLLADNSPDVLVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ ++V S R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIISRSVPQDVHF-----GLPSLPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V++++ + LDS + Y Q L +++ + Sbjct: 90 RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRHG 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D +++ + Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWFQNLLDLGLTDSLRHIHPEGAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ L D +R SDH P++ Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDV-------RVDLDTRALERPSDHAPVA 251 Query: 300 IDYD 303 ++D Sbjct: 252 AEFD 255 >gi|261854637|ref|YP_003261920.1| exodeoxyribonuclease III Xth [Halothiobacillus neapolitanus c2] gi|261835106|gb|ACX94873.1| exodeoxyribonuclease III Xth [Halothiobacillus neapolitanus c2] Length = 257 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 78/303 (25%), Gaps = 71/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + I+ LQE+ N Sbjct: 1 MKIATWNVNSLN----------------VRKPQVLSWLAQQQPAILGLQELKQVNEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 I S + + + + +A+ + R Sbjct: 42 -------IDNSDFAAMGYQTLLNGQKTYNGVALIYQEELGEPSDVVCDIPA---LDDPQR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + ++ V++ ++ + +DS + Y + +W+ + Sbjct: 92 RVIAATF----GELRVINAYVVNGEAIDSEKYQYK------LNWLEAFSNWLALEIAQHP 141 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN + D++ + + N Sbjct: 142 NLVVMGDFNIAPSDADVFDPERFKDAVLCSPPERDYFNRLLAMGFTDALNCFSNEE-NNF 200 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ + D +R SDH P+ Sbjct: 201 TWWDYRGGGYRRNHGLRIDHILTSPAVQAKATACHV-------DKEPRGWERPSDHAPVV 253 Query: 300 IDY 302 + Sbjct: 254 LTL 256 >gi|320354767|ref|YP_004196106.1| endonuclease/exonuclease/phosphatase [Desulfobulbus propionicus DSM 2032] gi|320123269|gb|ADW18815.1| Endonuclease/exonuclease/phosphatase [Desulfobulbus propionicus DSM 2032] Length = 259 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 80/285 (28%), Gaps = 33/285 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R++S+NI +G + W + D++ LQE V Sbjct: 2 IRVMSFNIRYGLADDGDNHWNRRKHFALDR-------IRAFGPDLLGLQECRDDGQAEFV 54 Query: 84 FPKNTWCIFYSTERLINHS---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 F+ R + +A + L +S P S+ Sbjct: 55 RACLPEYHFWGVHRQGPGDTALEMAPLLFRRSAFTLLDSGCFWLSES-PDDPGSMSWGSN 113 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + + G +L + +++ A+ L+ W+ + Sbjct: 114 YPRTVSWVRLACRGTGKTLLYANTHFDYEPSAIDGD-----------ARCLRQWLDRHCR 162 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKT-IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 +P ++ GDFN + + +S +A + ID+ Sbjct: 163 E-MPCIVTGDFNADKRSDAYRLLTDGGNLLDALRQVAPQGGNESTFHAFGRPEEQAAIDW 221 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ F D SDH PI+ D+ Sbjct: 222 ILVS---------SHFRVTEARIDRSCHGHLFPSDHYPITAVLDW 257 >gi|259416092|ref|ZP_05740012.1| endonuclease/exonuclease/phosphatase [Silicibacter sp. TrichCH4B] gi|259347531|gb|EEW59308.1| endonuclease/exonuclease/phosphatase [Silicibacter sp. TrichCH4B] Length = 333 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 48/330 (14%), Positives = 97/330 (29%), Gaps = 49/330 (14%) Query: 24 VRLVSWNINTL----SEQEGVSLWKNSVKRTT----SDYTLLRQYAKNLDADIVFLQEMG 75 +RL ++NI E + + L + R + + + +DAD + + E Sbjct: 1 MRLSTYNIEWFEALFDESDHLRLDEAPSARHEVSRRAQAEAIADVLRAIDADGITIIEGP 60 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + T ++ R + ++ A ++ A Sbjct: 61 NTGKRQSTVRALTRFAEWADLRTRDVVMGFANDTRQEIAFLFDSNVMQAEHAPISSPRAP 120 Query: 135 DSFSRAGNRRAVELLVE---------------INGKKIWVLDIHLKSFCFLDSLENTYSP 179 + V+ + +G ++ HLKS + + Sbjct: 121 RFDATFEIDLDVDAKADMVRFSKPPMELMVTPADGMPFRLIGAHLKSKAPHGARTPEEAR 180 Query: 180 SC-----SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-------- 226 + QA WL+ + E+ P V+ GD N F + Sbjct: 181 AISIANRRKQLAQAVWLRGRVEDHLEAGDPLVVMGDLNDGPGLDVYEALFGRSSVEIIMG 240 Query: 227 --TIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAY----KFLIQESF 275 DP+ + P ++ +A + +DY ++ K+ I F Sbjct: 241 AELFDPHARHLLRPNQQGLPTSARFYNHLEGRYFQALLDYIMISPPLQAHQPKWRIWHPF 300 Query: 276 SE-ILYNEDDIKSRGKRLSDHCPISIDYDF 304 + Y + SDH P+++D F Sbjct: 301 EDAACYGTPTLCQALLTASDHFPVTLDLAF 330 >gi|170764286|ref|ZP_02640401.2| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens CPE str. F4969] gi|170713790|gb|EDT25972.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens CPE str. F4969] Length = 262 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 44/292 (15%), Positives = 94/292 (32%), Gaps = 45/292 (15%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++++N+ + + + W + + + K+ DI+ QE + Sbjct: 3 DLKVMTFNLKYDFKAQDNNEW-------SQRCLRITKLIKDHLPDIIGTQEGLIHMLDDM 55 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAKDS 136 + + + + + D AI K VL+ P + Sbjct: 56 DDLLDEYS-------WVGEDREGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKD 108 Query: 137 FSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 F+ + R +L ++ I+G KI + + HL E ++ ++ + + Sbjct: 109 FNSSLPRICTKLKLKDKISGLKIDIYNTHL-----DHESELAREEGIKIILKEVKKIYKI 163 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP--KEKDSRCNANKNLR 252 P++I GDFN + N + + + + K Sbjct: 164 YKT------PYIIMGDFNCYLEDNLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGG 217 Query: 253 NKIPI-DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 I DY + + + N DD K G SDH P+ + + Sbjct: 218 YDGRIIDYILYSKE---------YEIKSLNIDDRKINGGYPSDHYPVICELE 260 >gi|157961464|ref|YP_001501498.1| exonuclease III [Shewanella pealeana ATCC 700345] gi|157846464|gb|ABV86963.1| exodeoxyribonuclease III [Shewanella pealeana ATCC 700345] Length = 268 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 89/310 (28%), Gaps = 72/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L+ + DI+ LQE + Sbjct: 1 MKIVSFNINGL----------------RARLHQLQALIDSHQPDIIGLQE---TKVHDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP ++ + + H +A+ K + Q +D A R Sbjct: 42 FP-------FADVEAMGYKVHYHGGKAHYGVAMLSKLEPIKVQKGFPTDEED----AQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+ + VL+ F ++ + + L ++ + S Sbjct: 91 MIMGTFTQENGRPLTVLN-----GYFPQGDNISHETKYPAKRKFYKDLMLYLNEYHSSDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 I GD N ++ ++ KT+ + F + Sbjct: 146 DIAIIGDINISPVDLDIGIGEPNAKRWLKTGKCSFQPEEREWLKTLMDWGLVDTFRELHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 R + ID + + + L + + D + S Sbjct: 206 ERSERYSWFDYRSKGFVDNRGLRIDVVLATKTLAERLTES-------DVDYDLRGIDKPS 258 Query: 294 DHCPISIDYD 303 DH PI + Sbjct: 259 DHAPIWSTFS 268 >gi|332976281|gb|EGK13142.1| hypothetical protein HMPREF9373_1351 [Psychrobacter sp. 1501(2011)] Length = 1300 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 48/327 (14%), Positives = 97/327 (29%), Gaps = 58/327 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWK------------NSVKRTTSDYTLLRQYAKNLDADIVF 70 +V + S N+ G S ++ ++++ L + LDAD+V Sbjct: 595 EVTVASANVLNFFTTFGNSKFETPYGNEQSGRGADNLEEYNRQLDKLVSMIQGLDADVVG 654 Query: 71 LQEMGSY------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 L E+ + +A+ +T+ + N+ I + + Sbjct: 655 LMEIQNNGYGEDSAIKALVDAINARLGADTYD-YIKGPFNNGSESTAGNDAIMVGMIYKP 713 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENT 176 NV + + + GNR + E N G++ V+ H KS + + Sbjct: 714 ANVTPVGSAVVPDTDEYPAFANGNRVPLAQAFESNKDGEQFSVVVNHFKSKGSVIDPDQQ 773 Query: 177 YSPSCS--LLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 + + AQ LK W+ V+ GDFN + ++ + Sbjct: 774 DGQGNNPITRLEAAQQLKQWMDTDPTGTGDTDNVLIGDFNSYTMEDS-----LQYLENSG 828 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG--- 289 + + +D+ + ++ + + I E Sbjct: 829 Y------DIQKEGFSYVFDGLWGSLDHVITSESMSDQITGVATWGINAEEATAFDYNTNF 882 Query: 290 -------------KRLSDHCPISIDYD 303 R SDH P+ I + Sbjct: 883 KGNGQKGLYAPDAYRASDHNPVLIGLN 909 >gi|300692524|ref|YP_003753519.1| metal dependent endonuclease/phosphatase [Ralstonia solanacearum PSI07] gi|299079584|emb|CBJ52262.1| putative metal dependent endonuclease/phosphatase [Ralstonia solanacearum PSI07] Length = 248 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 46/286 (16%), Positives = 92/286 (32%), Gaps = 49/286 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA---V 80 +R+ ++NI+ + +RQ +DADIVFLQE+ N Sbjct: 4 LRVATYNIH----------KGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVA 53 Query: 81 AKVFPKNT---WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A++F N + + + + H A+ + +L ++ + S Sbjct: 54 AELFDPNYTQLRYLATDVYPHTVYGRNAVYDHGHHGNAIMSRYPILLSENLDI-----SD 108 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R R + + ++ ++ +L H F +QA+ L + + Sbjct: 109 HRFEQRGLLHAVADLGFGEVHLLCAHFGLF-------------ARSRQRQAEALIERVRS 155 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 + P ++AGDFN N L + + + R + + + + Sbjct: 156 VVPTDAPLLVAGDFNDWNNRLD--RVICQALGATEVADRSAGAR--PLRTFPSHLPWLRL 211 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + +I + SDH P+ D Sbjct: 212 DRIYVRG-----------FDIERAHALTGRDWAQRSDHVPLLADLS 246 >gi|237710201|ref|ZP_04540682.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 9_1_42FAA] gi|229455663|gb|EEO61384.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 9_1_42FAA] Length = 306 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 30/285 (10%), Positives = 84/285 (29%), Gaps = 26/285 (9%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRT 50 ++K +L L + + R++ +N+ L + + +L + + R Sbjct: 1 MKKTILFLCLCYLVGVTYAQEPFRVMFYNVENLFDCQHDTLKNDYEFLPDAPKGWTQARY 60 Query: 51 TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 + + D+V L E+ + + + + + + + Sbjct: 61 HDKLARIAKVIIATGEENVPDLVGLCEVENDHCLKDLTENSPLREAGYRYVMTDSPDE-- 118 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLK 165 I A+ ++ +++ ++ + K+ R R + + ++ +G + V H+ Sbjct: 119 -RGIDVALLYQRGTFKLVGKNCISVPYKEI-ERRPTRDILHVTGQVASGDTLDVFVCHMP 176 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 S + Y L + Q + +I GDFN Sbjct: 177 SRAGGEEKSEPYR----LFTAQILKIAADSVMNIRQHPNVMIMGDFNDYPTNNSIAKVLG 232 Query: 226 KTI--DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 + + + + +D ++ + Sbjct: 233 AVAPKSGVQAKKLYNLMDGRKEGTYRYRGEWGVLDQLIVSGFLLQ 277 >gi|113868345|ref|YP_726834.1| metal-dependent hydrolase [Ralstonia eutropha H16] gi|113527121|emb|CAJ93466.1| Metal-dependent hydrolase [Ralstonia eutropha H16] Length = 284 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 89/308 (28%), Gaps = 57/308 (18%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L+SWNI +G + R + DAD++ LQE+ + P Sbjct: 3 LISWNIQWGRGADGHVD----LGRQVDTLRGIA------DADVICLQEVTRGFGELRGSP 52 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGAKDSF 137 + H D T + + + L D Sbjct: 53 GEDQVTELTALLPGYHLLYAPGVDRRTATGGRKQFGNLIATRLPVREVFRHALPWPADPQ 112 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 + R A+E VE++ +++ V+ HL+ + + + +A + Sbjct: 113 VASMPRVALEASVEVSTRRLRVICTHLEYYSSHQ--RAAQAEALRTWHAEACDHARRPGR 170 Query: 198 KKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ PF V+ GDFN K + + ++P D ++ + Sbjct: 171 SEKWPGPFTPEPRPAEAVLCGDFNSKPDDIAYRR----VLEPFDDATPPWRDAWLHTHPG 226 Query: 249 -------------KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + D+ + +N + + SDH Sbjct: 227 QPHAPTCALYDKEQWPEPPFACDFMFVTENLAGRIRRCEV-----------DADTASSDH 275 Query: 296 CPISIDYD 303 PI + D Sbjct: 276 QPILLSLD 283 >gi|209964343|ref|YP_002297258.1| exodeoxyribonuclease III [Rhodospirillum centenum SW] gi|209957809|gb|ACI98445.1| exodeoxyribonuclease III [Rhodospirillum centenum SW] Length = 257 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 86/303 (28%), Gaps = 72/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N + + + D+V LQE+ A Sbjct: 1 MKIATWNVN----------------SVKARLPNVLSWLNAAAPDVVLLQEIKCETA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + +D +R Sbjct: 41 ------SFPALEFEPLGYRVHAVGQKSYNGVAILSRLPVEDLIERLPGEPEDVQAR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + I G + + ++L + + S + Y + + LK + + V Sbjct: 91 ---YVEGTIGG--LRIASLYLPNGNPVGSEKYPYK------LRWMERLKAHVGELLAREV 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 PFV+ GD+N D ++ I F + +A Sbjct: 140 PFVLGGDYNVIPAPEDVYDPEGWSGDALFRRETREKFREILNLGLTEAFRALHPAARHAY 199 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+F++ A L + D ++ SDH P+ Sbjct: 200 TFWDYQAGAWPRDLGLRIDHFLLSPQAADRLAGCTI-------DRSPRGQEKASDHTPVL 252 Query: 300 IDY 302 +D Sbjct: 253 LDL 255 >gi|209551444|ref|YP_002283361.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537200|gb|ACI57135.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 288 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 43/323 (13%), Positives = 81/323 (25%), Gaps = 79/323 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 + S+NI +G D + + AD++ LQE+ Sbjct: 1 MNFASYNIQYGFGLDG-----------RYDLARIARSL--EGADVIALQEVTRGFSRNGF 47 Query: 75 -GSYNAVAKVFPKNTWCIFYS--TERLINHSKRDSNNDIHT--AIAVRKKNVRVLQQSYP 129 +A FP W + R V + + ++ Sbjct: 48 ADMTADLAACFPDYFWVYGPACDIHVEAGEGGRQPVRGTRFQFGNMVLSRWPILSTRTLL 107 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 L ++ R A E ++ + G I V +HL +Q Q Sbjct: 108 LPRSRTIGKINLQRGATEAVIAVPGGAIRVYSVHLDHVSPD------------ERIRQLQ 155 Query: 190 WLKDWITQKKESL-----------------VPFVIAGDFNRKINYLGN-------NDDFW 225 +L I + +VI GDFN + + Sbjct: 156 FLNAHINAFVQEGGSLTGAGEFDLPEPPLPEDYVILGDFNMEPESPEYCALAGAGGGYYG 215 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 + + F + + ++ +DY + L Sbjct: 216 RVARIGTPVDAFAALEAYGPGSYSWMNPEDHGERMHLDYCFVSCGLVSRLQAARI----- 270 Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303 SDH P+ ++ + Sbjct: 271 ------DTQSVGSDHFPLWVEIE 287 >gi|108759762|ref|YP_633331.1| exodeoxyribonuclease III [Myxococcus xanthus DK 1622] gi|108463642|gb|ABF88827.1| exodeoxyribonuclease III [Myxococcus xanthus DK 1622] Length = 256 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 86/303 (28%), Gaps = 73/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N + L + K D++ LQE+ + Sbjct: 1 MKIATWNVN----------------SVRARQERLLAWLKKAQPDVLCLQELKCVDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + + +A+ K G D + R Sbjct: 41 ------DFPMEAVRELGYHAAVHGQKTYNGVAILAKEEPKDVVK----GLSDGVDDSHAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + I V+ + + +DS + Y L+ ++ + + Sbjct: 91 LIAATV-----GGIRVVSAYAPNGQSVDSPQYQYKLEWYGR------LRRYLDTRHKPDE 139 Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD+N + D D + + F + Sbjct: 140 PLVLGGDWNVAPEDIDTYDPKLWEGQTLFTLKERDALQRLGAFGLSDAFRRLHPGVQK-F 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ++ ID+ + + L + + D + +GK+ SDH P+ Sbjct: 199 TWWDYRMLGFPKNLGLRIDHLYVTAPVAERLT-------VVDVDREERKGKQPSDHAPVW 251 Query: 300 IDY 302 ++ Sbjct: 252 LEL 254 >gi|240113324|ref|ZP_04727814.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae MS11] gi|260439854|ref|ZP_05793670.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae DGI2] gi|268599400|ref|ZP_06133567.1| exodeoxyribonuclease III [Neisseria gonorrhoeae MS11] gi|291043128|ref|ZP_06568851.1| exodeoxyribonuclease III [Neisseria gonorrhoeae DGI2] gi|268583531|gb|EEZ48207.1| exodeoxyribonuclease III [Neisseria gonorrhoeae MS11] gi|291012734|gb|EFE04717.1| exodeoxyribonuclease III [Neisseria gonorrhoeae DGI2] Length = 256 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 87/304 (28%), Gaps = 73/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + DI+ LQE Sbjct: 1 MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ ++V S R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRSVPQDVHF-----GLPSLPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V++++ + LDS + Y Q L +++ + Sbjct: 90 RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMSRHG 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D +++ + + Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWYEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ L D +R SDH P++ Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDV-------RIDLETRALERPSDHAPVA 251 Query: 300 IDYD 303 ++D Sbjct: 252 AEFD 255 >gi|153825215|ref|ZP_01977882.1| exodeoxyribonuclease III [Vibrio cholerae MZO-2] gi|153830542|ref|ZP_01983209.1| exodeoxyribonuclease III [Vibrio cholerae 623-39] gi|229523879|ref|ZP_04413284.1| exodeoxyribonuclease III [Vibrio cholerae bv. albensis VL426] gi|229529117|ref|ZP_04418507.1| exodeoxyribonuclease III [Vibrio cholerae 12129(1)] gi|297579378|ref|ZP_06941306.1| exodeoxyribonuclease III [Vibrio cholerae RC385] gi|148873972|gb|EDL72107.1| exodeoxyribonuclease III [Vibrio cholerae 623-39] gi|149741194|gb|EDM55245.1| exodeoxyribonuclease III [Vibrio cholerae MZO-2] gi|229332891|gb|EEN98377.1| exodeoxyribonuclease III [Vibrio cholerae 12129(1)] gi|229337460|gb|EEO02477.1| exodeoxyribonuclease III [Vibrio cholerae bv. albensis VL426] gi|297536972|gb|EFH75805.1| exodeoxyribonuclease III [Vibrio cholerae RC385] gi|327484412|gb|AEA78819.1| Exodeoxyribonuclease III [Vibrio cholerae LMA3894-4] Length = 268 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 83/311 (26%), Gaps = 76/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++S+NIN L + L+ D++ LQE + Sbjct: 1 MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEAFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +++ H +A+ K V + G Sbjct: 45 QEVEAMGYQVYFH------------GQKAHYGVAILCKQTPVEV----IKGFPTDNEEHQ 88 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + NG+K +L+ F + Q + L ++ + + + Sbjct: 89 KRMIMATFADQNGQKTTILN-----GYFPQGDNVEHETKFPYKRQFYRDLMTYLREHRSN 143 Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240 V+ GD N ++ ++ +T+ + F + Sbjct: 144 SERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSFQPEEREWLQTLLDWGLVDTFRQL 203 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + + + D + Sbjct: 204 HPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLAETCQEAGI-------DYELRAIDK 256 Query: 292 LSDHCPISIDY 302 SDH PI + Sbjct: 257 PSDHAPIWATF 267 >gi|296102796|ref|YP_003612942.1| exonuclease III [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057255|gb|ADF61993.1| exonuclease III [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 268 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 80/310 (25%), Gaps = 75/310 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEQHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K V + R Sbjct: 42 FP-------LEEVVKLGYNVFYHGQKGHYGVALLTKETPVSVRR-----GFPGDGEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + I V++ F + ++ Q L+D++T + + Sbjct: 90 RIIMAEIPSALGNITVIN-----GYFPQGESRDHETKFPAKAKFYQDLQDYLTTELKKEN 144 Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 P +I GD N + + + + F Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLLS-WGLVDTFRTAN 203 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID + + I+ D ++ Sbjct: 204 PDTQDRFSWFDYRSKGFDDNRGLRIDLLLASSPLAERCIETGI-------DYDIRSMEKP 256 Query: 293 SDHCPISIDY 302 SDH P+ + Sbjct: 257 SDHAPVWAKF 266 >gi|218709053|ref|YP_002416674.1| exonuclease III [Vibrio splendidus LGP32] gi|218322072|emb|CAV18146.1| Exodeoxyribonuclease III [Vibrio splendidus LGP32] Length = 268 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 80/309 (25%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQAIIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K + Q +D R Sbjct: 42 -------FPLADVEAMGYKVYFHGQKAHYGVAMLCKQEPISVQKGFPTDNEDHQK----R 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +G+K+ VL+ F + Q + L ++ Sbjct: 91 MIMATFEDEHGEKVTVLN-----GYFPQGDNIKHETKYPYKRQFYKDLMTYLNDYHNKDE 145 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ KT+ + F Sbjct: 146 QVIVMGDINISPTDIDIGIGEPNAKRWLKTGKCSFQPEEREWLKTLMDWGFVDSFRLLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + D ++ S Sbjct: 206 EVNDQYSWFDYRSKGFVDNRGLRIDVVLATQKLADKCTEAGI-------DYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|220917946|ref|YP_002493250.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans 2CP-1] gi|219955800|gb|ACL66184.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans 2CP-1] Length = 296 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 85/291 (29%), Gaps = 38/291 (13%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKN------SVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++VR+VSWN++ L + + + + LDAD+V LQ Sbjct: 34 TAGERVRIVSWNVHDLFDDVDRLEPPGALDTVATADEVEAKLARVTAVLARLDADLVLLQ 93 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ + + + + E +AV + S+ Sbjct: 94 EVETAALAGALAARAGYAEARLVEGNDPRG---------IDVAVLSRLPLRAYVSHRDER 144 Query: 133 AKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 S R VE +G + ++ HL S D + ++QA L Sbjct: 145 DA-SGRPLFPRDCVEAHAALPDGGTLALVGSHLSSALSDDG---------TRRAEQAARL 194 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 ++ + V GD N + + + Sbjct: 195 REVADGLLRAGARVVAGGDLNDEAGST----ALAPLLGDGGWIDPAAALPPEARWTWSGG 250 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D+ + + ++Q + + SDH P+ +D Sbjct: 251 AARAALDHLAIPRADAGSVVQAAI--------AGGPDVQAASDHRPVVLDL 293 >gi|103487806|ref|YP_617367.1| endonuclease/exonuclease/phosphatase [Sphingopyxis alaskensis RB2256] gi|98977883|gb|ABF54034.1| Endonuclease/exonuclease/phosphatase [Sphingopyxis alaskensis RB2256] Length = 231 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 79/279 (28%), Gaps = 52/279 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ S+N+ K D + + LDADIV LQE Sbjct: 2 IKVASYNMR-----------KGIGLDRRRDPGRVLAVLRELDADIVALQEADRRFGTRAS 50 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 +S ++ A+ + +++S+ L R Sbjct: 51 AIPPHMFEEHSDYVPVDLLHGRPYAIGWHGNALLVRKGAEVEESHAL-----HLPTLEPR 105 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 AV V I ++ V+ +HL S QQA+ + I + + Sbjct: 106 GAVAATVRIGDTRLRVVGMHL-------------DISGLRRRQQARAILHHIA--EGEKL 150 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 P ++ GD N W+ + ++ + R +D Sbjct: 151 PTILMGDCNE-----------WRQTGGCLADFGAEHRLVDTGHSFHSRRPVAKLDRIFAS 199 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + R SDH PI + Sbjct: 200 PDLDP--VDAGVH--------RSALAARASDHLPIWARF 228 >gi|21243041|ref|NP_642623.1| hypothetical protein XAC2306 [Xanthomonas axonopodis pv. citri str. 306] gi|21108551|gb|AAM37159.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 278 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 94/287 (32%), Gaps = 36/287 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 A+ ++++ LV+ N++ E + + + K L D++ LQE+ Sbjct: 15 SPAAASREMTLVTLNLHHDRED------------WPARRAHIAKELKRLAPDVIALQEVI 62 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 V + W I S AV + + Q L D Sbjct: 63 ERRG--SVENQAAWLARKLGYDYIFASVDPVGAPKRYGNAVLSRRRVLATQQRLLQPLDD 120 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R A L V+++G+ + V HL E + + ++Q L D+I Sbjct: 121 Y------RVAAHLQVDVDGQPVNVYVTHLN--------ERADARGTGIRTRQVADLLDFI 166 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + P VIAGDFN + L D S+ R S N + R Sbjct: 167 ASN-SAQAPVVIAGDFNTAADTLDLQALRKGYGDSYGSVHRNSDATVSTLNMHVFDR-PA 224 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ QN + Y E G+ SDH + + Sbjct: 225 RIDHVFFQQNRLLAREARILFDTPYAE------GRWASDHYGVWVRL 265 >gi|238919557|ref|YP_002933072.1| exodeoxyribonuclease III, [Edwardsiella ictaluri 93-146] gi|238869126|gb|ACR68837.1| exodeoxyribonuclease III, putative [Edwardsiella ictaluri 93-146] Length = 269 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 78/309 (25%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +S+NIN L + L + D++ LQE + Sbjct: 1 MKFISFNINGL----------------RARPHQLAAIVEKHSPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + H +A+ + + + R Sbjct: 42 FP-------LQDLAHLGYQLHYHGQKGHYGVALLTRMAPLAVRK-----GFPGDDAEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + S+ L+ ++ Sbjct: 90 RVIMADIPTELGTLTVIN-----GYFPQGESRDHPIKFPAKSKFYADLQRYLQDSLTPQN 144 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N ++L ++ + + + + Sbjct: 145 PVLIMGDMNISPRDIDIGIGDESRRRWLRSGKCSFLPEEREWLDRLLAWGLVDTYRQANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + D ++ S Sbjct: 205 QGDDHFSWFDYRSKGFDDNRGLRIDLLLASQPLAQRCTDTGI-------DYEIRAMEKPS 257 Query: 294 DHCPISIDY 302 DH PI ++ Sbjct: 258 DHAPIWAEF 266 >gi|260563899|ref|ZP_05834385.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M] gi|260153915|gb|EEW89007.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M] Length = 279 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 91/315 (28%), Gaps = 69/315 (21%) Query: 13 LVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 +PC A +++ +WNIN + L+ + + DIV Sbjct: 7 CLPCPARAHNHYGMKIATWNING----------------VKARIDNLQHWLRESSPDIVC 50 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 LQE+ S + + + +A+ K Sbjct: 51 LQEIKSVDE----------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLP 100 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 D +R +E + + + V+ ++L + +D+ + Y S Q Sbjct: 101 GDDSDEQARF-----IEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQR 149 Query: 191 LKDWITQKKESLVPFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIR 236 L++W ++ P V+AGD+N + + N Sbjct: 150 LENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTD 209 Query: 237 FPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + + ID+ ++ A I + + + Sbjct: 210 AIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------R 262 Query: 288 RGKRLSDHCPISIDY 302 ++ SDH P+++ Sbjct: 263 AWEKPSDHVPVTVTL 277 >gi|115379792|ref|ZP_01466863.1| endonuclease/exonuclease/phosphatase [Stigmatella aurantiaca DW4/3-1] gi|310820726|ref|YP_003953084.1| endonuclease/exonuclease/phosphatase domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115363210|gb|EAU62374.1| endonuclease/exonuclease/phosphatase [Stigmatella aurantiaca DW4/3-1] gi|309393798|gb|ADO71257.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella aurantiaca DW4/3-1] Length = 254 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 45/282 (15%), Positives = 83/282 (29%), Gaps = 47/282 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+ LVS+NI++ +G D + + + AD++ LQE+G + +V Sbjct: 2 KLTLVSYNIHSGVGTDGRF-----------DLHRVGEVLRETHADVIALQEVGDFRSVTD 50 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + A+ + + ++Y L Sbjct: 51 REDQPEHLADMLGLHMAFGPNV-VKAGRRYGNAILTRLPILQSKNYDLSVPG-----REP 104 Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R A+ +++ GK + V +HL Q+ L I Q Sbjct: 105 RGALRCDLDLGAGKALHVFCLHLGLSIG------------ERRRQERLLLSADILQDAAR 152 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 P V+ GDFN N E D+ + + +D Sbjct: 153 KDPVVVCGDFNYWGNKPVPALVRQAI-------HDVALELDAPARTYPSRLPMLRLDRIF 205 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D + S SDH P+ + ++ Sbjct: 206 VDTG----VRPISIH------PHRSELASVASDHLPLVMRFE 237 >gi|255953047|ref|XP_002567276.1| Pc21g02110 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588987|emb|CAP95108.1| Pc21g02110 [Penicillium chrysogenum Wisconsin 54-1255] Length = 449 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 41/318 (12%), Positives = 96/318 (30%), Gaps = 30/318 (9%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++ +L+++ + A+ K +S+N+ L + + T + LL Y Sbjct: 1 MKTILLSVLLPALASAATTNGKFTALSFNVAGLPSILQSNDVNGTK---TENAKLLGTYF 57 Query: 62 KNLDADIVFLQEMG-SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 DI+ +QE+ ++ + + R + ++T Sbjct: 58 SEYGYDIINMQEVPLHPVSLDFNYHAYIYETDTHAYRTATSGGAAIGSGLNT--ISNYNW 115 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSP 179 V + + + + +G + ++H + + S Sbjct: 116 VDFARVKWNKCSDASGSDCLTPKGFTFMRWNPADGVYVDFYNLHADAGTEDEDETARNSN 175 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 Q + D+I + V+ GD N + + N + + Sbjct: 176 --------LQQVADYIDTW-STGNAVVVMGDTNSRYTRAK-DTAIRVFKSQNTLADPWVE 225 Query: 240 EKDSRCNAN-----------KNLRNKIPIDYFVMDQNAYKFLIQESFSEIL--YNEDDIK 286 + +++ +D + + L +SF + D K Sbjct: 226 LEKDGVYPTAGADALVCENPSSVQTCETVDKVLYRGSNVVSLKADSFVYASEKFTNTDPK 285 Query: 287 SRGKRLSDHCPISIDYDF 304 G LSDH PI +++ + Sbjct: 286 YLGDILSDHNPILVNFTW 303 >gi|114771793|ref|ZP_01449186.1| exodeoxyribonuclease III [alpha proteobacterium HTCC2255] gi|114547609|gb|EAU50500.1| exodeoxyribonuclease III [alpha proteobacterium HTCC2255] Length = 260 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 88/303 (29%), Gaps = 67/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + L + DI LQE+ S + + Sbjct: 1 MKIATFNING----------------IKARLPALLDWLSETMPDIAMLQEIKSVDEL--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ K + D +R Sbjct: 42 -------FPREEIEALGYQIHSHGMKGFNGVAILSKYPLEDIMRGLPGDSDDIQTRY--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E V N + + +++L + + Y + + L + + Sbjct: 92 --IEATVITNKGPLRLCNLYLPNGNPTPGPKFDYK------LKWMKRLYERTCALIKLEE 143 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF++AGDFN YL + ++ I F + S N Sbjct: 144 PFLLAGDFNIIPQAEDCWDTKVWESDAAYLPESRAAYRKILNLGLTDAFRVKNKSAMNYT 203 Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 N I ID+F++ + LI D + SDH P+ + Sbjct: 204 FWDYQAGAWNKNNGIRIDHFLLSSSCADILIDC-------QSDRECRARDKPSDHVPVWV 256 Query: 301 DYD 303 + D Sbjct: 257 ELD 259 >gi|108759975|ref|YP_631081.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] gi|108463855|gb|ABF89040.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] Length = 715 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 84/307 (27%), Gaps = 23/307 (7%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIV 69 + +A A WN+ +S + D R A++ Sbjct: 163 LTLSVSAPGAPVFTAGQWNLTYFGSDSRGPSNSSSDGGASDDLQIAGARDIMLAAGANLW 222 Query: 70 FLQEMGSYNAVAKV-FPKNTWCIFYSTERLINHSKRDSNN--DIHTAIAVRKKNVRVLQQ 126 + EM + + F S + + Sbjct: 223 AMVEMVDTADFDLLKAQLPGFDGFLSNDAAFVSGGTSPYGTSSQKLGVLYDSSLTFQSAT 282 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 + D R R + + V+ +H+++ + S Sbjct: 283 LVRIGNISDFADRPPLRVDFTTEINGAETPLTVIVVHMRANSADPTAPREARERAS---- 338 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND---------DFWKTIDPNDSLIRF 237 LK ++ ++ + GD+N ++ + D + + + Sbjct: 339 --AALKAYLDEQLP-TQHVFVIGDWNDDVDESISLDPTSGAPLATPYQNFVSDSAHFTFI 395 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 +E S + ++ + +D+ + A + ES + Y ++ +SDH P Sbjct: 396 TRE-LSLAGDDTSIGFENVVDHTLATNEAADRYVAESARVL-YVDEWFPDFLNVVSDHRP 453 Query: 298 ISIDYDF 304 + Y F Sbjct: 454 VVSSYAF 460 >gi|307592282|ref|YP_003899873.1| endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7822] gi|306985927|gb|ADN17807.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7822] Length = 798 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 96/328 (29%), Gaps = 47/328 (14%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 A V +++ +N+ G + L L+AD++ L+E+ Sbjct: 449 TPAEVGGDIKIGDFNLENYFTTLGSRGA-QTEFEFQRQQDKLVSAILGLNADVLGLEEVQ 507 Query: 76 SY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKKNVRVLQQSYP 129 + +A+A + T IN D + + V + + Sbjct: 508 NNGYGPNSAIASLVDALNTVAGAGTYAYINPGVAQLGTDQIAVGLLYKPSRVNPVGNAAI 567 Query: 130 LLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFL-----------DSLENT 176 L F+ NR A+ + ++ ++ + H KS ++ + Sbjct: 568 L--DTGIFNPTINRPALAQTFKGLLDSEQFTIAVSHFKSKGGTASAAGSCTAAQNADQGD 625 Query: 177 YSPSCS-LLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + + + QA L W+ +I GD N TI+ Sbjct: 626 GQGAFNCTRTLQAIQLSQWLATNPTNSKTNYQIILGDLNSYAKEDPI-----TTIESAGY 680 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR----- 288 + + + + + +DY + F+ + I +E D+ Sbjct: 681 INLDKQFGGNNTYSYQFQGQFGTLDYGFSSASLLPFVTGATPWHINSDEPDVLGYSTAFK 740 Query: 289 ------------GKRLSDHCPISIDYDF 304 SDH P+ I +F Sbjct: 741 SPSQIDSIYSPDAFASSDHDPLLIGLNF 768 >gi|241204407|ref|YP_002975503.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858297|gb|ACS55964.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 263 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 94/305 (30%), Gaps = 68/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + L Q+ K+ D DIV LQE+ + V + Sbjct: 1 MKIATWNING----------------VKARIDNLTQWLKDSDPDIVCLQEIKT---VDEG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + +A+ KN D + R Sbjct: 42 FPRLE-------IEALGYHVETHGQKGFNGVAILSKNSPFEVNRGLPGDPLDEQA----R 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + V ++L + +++ + Y + + L+ + ++ Sbjct: 91 FLEAAFTLSDTRILRVCCLYLPNGNPVETEKYPYKLA------WMERLRTFAAERLAYEE 144 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+AGD+N +L + ++ ++ + Sbjct: 145 MLVLAGDYNVIPEPHDCFDPKVWENDALFLPQTREAFRRLENLGLTDAL-RATTDATQLY 203 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ A + + + + ++ SDH P+ Sbjct: 204 SFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIEKHV-------RAWEKPSDHVPVI 256 Query: 300 IDYDF 304 +DF Sbjct: 257 AYFDF 261 >gi|153213065|ref|ZP_01948603.1| exodeoxyribonuclease III [Vibrio cholerae 1587] gi|124116112|gb|EAY34932.1| exodeoxyribonuclease III [Vibrio cholerae 1587] Length = 268 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 84/311 (27%), Gaps = 76/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++S+NIN L + L+ D++ LQE + Sbjct: 1 MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEAFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +++ H +A+ K V + G + Sbjct: 45 QEVEAMGYQVYFH------------GQKAHYGVAILCKQTPVEV----IKGFPTDNAEHQ 88 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + NG+K +L+ F + Q + L ++ + + + Sbjct: 89 KRMIMATFADQNGQKTTILN-----GYFPQGDNVEHETKFPYKRQFYRDLMTYLREHRSN 143 Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240 V+ GD N ++ ++ +T+ + F + Sbjct: 144 SERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSFQPEEREWLQTLLDWGLVDTFRQL 203 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + + + D + Sbjct: 204 HPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLAETCQEAGI-------DYELRAIDK 256 Query: 292 LSDHCPISIDY 302 SDH PI + Sbjct: 257 PSDHAPIWATF 267 >gi|332288253|ref|YP_004419105.1| exonuclease III [Gallibacterium anatis UMN179] gi|330431149|gb|AEC16208.1| exonuclease III [Gallibacterium anatis UMN179] Length = 267 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 88/311 (28%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L Q D++ LQE + Sbjct: 1 MKFISFNINGL----------------RARPHQLHQLIAQYQPDVLGLQEIKVADEAFPH 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + +FY H +A+ K + + A+D+ Sbjct: 45 EIVADLGYHVFYH------------GQKSHYGVALLTKQQPLAVRKGFPTDAEDA----- 87 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 RR + + ++ V++ F ++ + + L+ ++ ++ + Sbjct: 88 QRRIIMADLATPFGQLTVIN-----GYFPQGENRSHETKFPAKEKFYRDLQHYLVKEHNA 142 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 P ++ GD N L ++ + + + F Sbjct: 143 ANPVLVMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWLQNLYQYGLVDTFRAL 202 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + +Q + I ++ Sbjct: 203 HPQVNDQFSWFDYRSKGFDDNRGLRIDLILANQALAQRCISAGI-------AKDIRAMEK 255 Query: 292 LSDHCPISIDY 302 SDH PI ++ Sbjct: 256 PSDHAPIWAEF 266 >gi|330831230|ref|YP_004394182.1| putative phospholipase C [Aeromonas veronii B565] gi|328806366|gb|AEB51565.1| Putative phospholipase C [Aeromonas veronii B565] Length = 438 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 47/298 (15%), Positives = 91/298 (30%), Gaps = 42/298 (14%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-- 76 ++++ S+N+ L TLL Y K DA + LQE+ Sbjct: 169 PAENRLKVASYNVWALPVIASSIG---------ERLTLLPDYLKGYDA--LLLQEVFDGR 217 Query: 77 -YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + + + + +D I R VR Q YP D Sbjct: 218 REGFLQALAKEYPYQTKVLDKP------GINVHDGGVVIVSRYPIVREAQLVYPQCTGTD 271 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 F+ + V GK + H SF ++ + + Q + L + Sbjct: 272 CFADK---GVMYAEVIKGGKAWHLFATHTASFDTDEARKLR-----QIQFGQIRSLAASL 323 Query: 196 TQKKESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-- 252 + + GDFN + + + ++ ++ + ++ + N Sbjct: 324 K--IPATDTVIYGGDFNVNKRKFADDYANMLANLNAHEPA--YGGYTEATFDPRINPYAG 379 Query: 253 -------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 N +DY V+ + + I + D LSDH P+ + Sbjct: 380 GPLSGGANVEYLDYLVVSREYGNASHNLNTVWIPRSSDGSLWPASNLSDHFPVKGEIS 437 >gi|260566570|ref|ZP_05837040.1| exodeoxyribonuclease III [Brucella suis bv. 4 str. 40] gi|261758076|ref|ZP_06001785.1| exodeoxyribonuclease III [Brucella sp. F5/99] gi|260156088|gb|EEW91168.1| exodeoxyribonuclease III [Brucella suis bv. 4 str. 40] gi|261738060|gb|EEY26056.1| exodeoxyribonuclease III [Brucella sp. F5/99] Length = 279 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 91/315 (28%), Gaps = 69/315 (21%) Query: 13 LVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 +PC A +++ +WNIN + L+ + + DIV Sbjct: 7 CLPCPARAHNHYGMKIATWNING----------------VKARIDNLQHWLRESSPDIVC 50 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 LQE+ S + + + +A+ K Sbjct: 51 LQEIKSVDE----------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLP 100 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 D +R +E + + + V+ ++L + +D+ + Y S Q Sbjct: 101 GDDSDEQARF-----IEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQR 149 Query: 191 LKDWITQKKESLVPFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIR 236 L++W ++ P V+AGD+N + + N Sbjct: 150 LENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTD 209 Query: 237 FPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + + ID+ ++ A I + + + Sbjct: 210 AIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------R 262 Query: 288 RGKRLSDHCPISIDY 302 ++ SDH P+++ Sbjct: 263 AWEKPSDHVPVTVTL 277 >gi|194698716|gb|ACF83442.1| unknown [Zea mays] Length = 353 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 45/340 (13%), Positives = 89/340 (26%), Gaps = 48/340 (14%) Query: 11 FFLVPCTASVAQK--------VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 F +P + +Q RLVS+NI + ++ + S + Sbjct: 9 FAPLPTEQTESQTDGGAARYQFRLVSYNILAQVYVKSTLFPHSPSACLKWKSRSGAILTE 68 Query: 61 AKNLDADIVFLQEMGSYNAV-AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 K+ DAD + +QE+ Y+ K + + Y +A V+K+ Sbjct: 69 LKSFDADFMCIQELDEYDTFYKKNMENSGYSSIYIQRSGDKRDGCGIFYKPKSAELVQKE 128 Query: 120 NV-------------------------RVLQQSYPLLGAKDSFSRAGNR-----RAVELL 149 + + + P + + R + Sbjct: 129 VILYNDLVEKYVPSDNVNSALENNSSAEEDKNAKPDNSKRGDPNDPRVRLKRDCVGLLAA 188 Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209 +++ +L + + + L + + I+ K +IAG Sbjct: 189 FKLSDPCDQILIVANTHIYWDPQWIDVKLAQAKYLLSRVSQFEQLISNKYNCKPSVIIAG 248 Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLI-----RFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 DFN N + D + N +DY + Sbjct: 249 DFNSTPGDKVYNYLLSANLGSTDEAPIKLRSLYAANGGEPEYTNYTPGFTGTLDYIFLSD 308 Query: 265 NAYKFLIQ--ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + SDH PI D+ Sbjct: 309 GSSIKPTSLLRLPRGDSEDVKGGLPNFRHPSDHLPIGADF 348 >gi|148559237|ref|YP_001258847.1| exodeoxyribonuclease III [Brucella ovis ATCC 25840] gi|148370494|gb|ABQ60473.1| exodeoxyribonuclease III [Brucella ovis ATCC 25840] Length = 279 Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 90/315 (28%), Gaps = 69/315 (21%) Query: 13 LVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 +PC A +++ +WNIN + L+ + + DIV Sbjct: 7 CLPCPARAHNHYGMKIATWNING----------------VKARIDNLQHWLRESSPDIVC 50 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 LQE+ S + + + +A+ K Sbjct: 51 LQEIKSVDE----------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLP 100 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 D +R +E + + + V+ ++L + +D+ + Y S Q Sbjct: 101 GDDSDEQARF-----IEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQR 149 Query: 191 LKDWITQKKESLVPFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIR 236 L++W ++ P V+AGD+N + + N Sbjct: 150 LENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTD 209 Query: 237 FPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + + ID+ ++ A + + + Sbjct: 210 AIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFTSANIEKHV-------R 262 Query: 288 RGKRLSDHCPISIDY 302 ++ SDH P+++ Sbjct: 263 AWEKPSDHVPVTVTL 277 >gi|265763356|ref|ZP_06091924.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263255964|gb|EEZ27310.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 361 Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 87/304 (28%), Gaps = 68/304 (22%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +++ ++N+++ ++ + Y K DI+ QE Sbjct: 100 ANTLKIATYNVDSFGNEQSGYSC-----------KEIAAYMKEHRVDIICFQEFVGN--- 145 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + F ++ ++ + + ++ +A+ K + +++ Sbjct: 146 -RYFTSDSIRNAFADWQYAVIP-QAPDSTPILQVALFSKYPVKDSRLITYPDSRNCS--- 200 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP--------------------- 179 + + ++G+ + + + HL++ + Sbjct: 201 -----MWCDLNVDGQTVRIFNNHLQTTEVSQNKRRLERELAKDELTGREEAVAKQLLEGL 255 Query: 180 --SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + + QA+ L+ I + P ++ GDFN + + + F Sbjct: 256 NENFRKRAAQAKTLEQLIRT---TPYPVLVCGDFNSLPSSYTYSTVKGDNLQDG-----F 307 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + + IDY + D SDH P Sbjct: 308 QTCGHGYMYTFRYFKRLLRIDYIFHSKEFK-------------GVDYYSPDLDLCSDHNP 354 Query: 298 ISID 301 + ++ Sbjct: 355 VVME 358 >gi|237654298|ref|YP_002890612.1| endonuclease/exonuclease/phosphatase [Thauera sp. MZ1T] gi|237625545|gb|ACR02235.1| Endonuclease/exonuclease/phosphatase [Thauera sp. MZ1T] Length = 249 Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 92/287 (32%), Gaps = 48/287 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS----YN 78 +R+ S+NI+ Q + LR ++LDAD+VFLQE+ + Sbjct: 2 PLRICSYNIHKGFSQFNRRMV----------VHELRDRLRSLDADLVFLQEVQGLHLGHP 51 Query: 79 AVAKVFPKNTWCIFYS--TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 A +P F + + I + + H A+ +++ + + + S Sbjct: 52 ARHPDWPALPQHEFLAEDAWQQIAYGGNAIYDHGHHGNAILSRHLILSTANQDV-----S 106 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R R + V++ + V + + S +Q + L + + Sbjct: 107 DHRFERRGLLHCEVQLPEFDVPVHCVCVHLGLMAGS-----------RRRQMEALAERME 155 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + P +IAGDFN N D + + F + + + Sbjct: 156 ELAPGNAPLIIAGDFNDWRNRAD--DLLGRRL---GLAEAFGSGRGRPARSYPSTLPFFR 210 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D + F R+SDH ++ D + Sbjct: 211 LDRIYVRG----------FRVRQAQVHYGAP-WARISDHAALTADLE 246 >gi|90412875|ref|ZP_01220875.1| putative exodeoxyribonuclease III [Photobacterium profundum 3TCK] gi|90326234|gb|EAS42661.1| putative exodeoxyribonuclease III [Photobacterium profundum 3TCK] Length = 268 Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 88/310 (28%), Gaps = 74/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ + D++ LQE+ +V Sbjct: 1 MKVISFNINGL----------------RARLHQLQALIEKHQPDVIGLQEI---KVHDEV 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + H +A+ K + Q +D+ R Sbjct: 42 FP-------LADVEAMGYKVYHHGQKAHYGVAMLCKQEPINVQKGFPTDDEDA-----QR 89 Query: 144 RAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + E +GKK+ VL+ F ++ + L +++ + Sbjct: 90 RMIMATFEQEDGKKVTVLN-----GYFPQGENLSHETKFPAKEKFYADLMNYLNTHHTNE 144 Query: 203 VPFVIAGDFNRKINYLG---------------------NNDDFWKTIDPNDSLIRFPKEK 241 ++ GD N L ++ KT+ F + Sbjct: 145 EEVIVMGDINISPIDLDIGIGPANAKRWLKTGKCSFQLIEREWLKTLMDWGFTDTFRQLH 204 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID + + I D ++ Sbjct: 205 PDVDDQFSWFDYRSKGFVDNRGLRIDVVLATPSLAARCIDAGI-------DYELRGIEKP 257 Query: 293 SDHCPISIDY 302 SDH PI + Sbjct: 258 SDHAPIWSTF 267 >gi|301163088|emb|CBW22637.1| putative transmembrane endonuclease/exonuclease/phosphatase family protein [Bacteroides fragilis 638R] Length = 361 Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 88/304 (28%), Gaps = 68/304 (22%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +++ ++N+++ ++ L Y K DI+ QE A Sbjct: 100 ANTLKIATYNVDSFGNEQSGYSC-----------KELAAYMKEHRVDIICFQEF----AG 144 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + F ++ ++ + + ++ +A+ K + +++ Sbjct: 145 NRYFTSDSIRNAFADWQYAVIP-QAPDSTPILQVALFSKYPVKDSRLITYPDSRNCS--- 200 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP--------------------- 179 + + ++G+ + V + HL++ + Sbjct: 201 -----MWCDLNVDGQTVRVFNNHLQTTEVSQNKRRLERELAKNELTGREEAVAKQLLEGL 255 Query: 180 --SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + + QA+ L+ I + P ++ GDFN + + + F Sbjct: 256 NENFRKRAAQAKTLEQLIRT---TPYPILVCGDFNSLPSSYTYSTVKGDNLQDG-----F 307 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + + IDY + D SDH P Sbjct: 308 QTCGHGYMYTFRYFKRLLRIDYIFHSKEFK-------------GVDYYSPDLDLCSDHNP 354 Query: 298 ISID 301 + ++ Sbjct: 355 VVME 358 >gi|189024059|ref|YP_001934827.1| Exodeoxyribonuclease III [Brucella abortus S19] gi|297248222|ref|ZP_06931940.1| exodeoxyribonuclease III [Brucella abortus bv. 5 str. B3196] gi|189019631|gb|ACD72353.1| Exodeoxyribonuclease III [Brucella abortus S19] gi|297175391|gb|EFH34738.1| exodeoxyribonuclease III [Brucella abortus bv. 5 str. B3196] Length = 296 Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 91/315 (28%), Gaps = 69/315 (21%) Query: 13 LVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 +PC A +++ +WNIN + L+ + + DIV Sbjct: 24 CLPCPARAHNHYGMKIATWNIN----------------SVKARIDNLQHWLRESSPDIVC 67 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 LQE+ S + + + +A+ K Sbjct: 68 LQEIKSVDE----------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLP 117 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 D +R +E + + + V+ ++L + +D+ + Y S Q Sbjct: 118 GDDSDEQARF-----IEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQR 166 Query: 191 LKDWITQKKESLVPFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIR 236 L++W ++ P V+AGD+N + + N Sbjct: 167 LENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTD 226 Query: 237 FPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + + ID+ ++ A I + + + Sbjct: 227 AIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------R 279 Query: 288 RGKRLSDHCPISIDY 302 ++ SDH P+++ Sbjct: 280 AWEKPSDHVPVTVTL 294 >gi|116251798|ref|YP_767636.1| exodeoxyribonuclease III [Rhizobium leguminosarum bv. viciae 3841] gi|115256446|emb|CAK07530.1| putative exodeoxyribonuclease III [Rhizobium leguminosarum bv. viciae 3841] Length = 263 Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 97/304 (31%), Gaps = 66/304 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + L Q+ K+ + DIV LQE+ + V + Sbjct: 1 MKIATWNING----------------VKARIDNLTQWLKDSNPDIVCLQEIKT---VDEG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + +A+ K+ D + R Sbjct: 42 FPRLE-------IEALGYHVETHGQKGFNGVAILSKSSPFEVNRGLPGDPLDEQA----R 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + V I+L + +++ + Y + + L+ + ++ Sbjct: 91 FLEAAFTLSDMRILRVCCIYLPNGNPVETEKYPYKLA------WMERLQTFAAERLAYEE 144 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++AGD+N +L + ++ ++ D+ + Sbjct: 145 MLILAGDYNVIPEPHDCFDPRVWENDALFLPQTREAFRRLENLGLTDAVRATTDATQFYS 204 Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 N I ID+ ++ A + + + + ++ SDH P+ Sbjct: 205 FWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIEKHV-------RAWEKPSDHVPVIA 257 Query: 301 DYDF 304 +DF Sbjct: 258 YFDF 261 >gi|304411895|ref|ZP_07393506.1| exodeoxyribonuclease III [Shewanella baltica OS183] gi|307303337|ref|ZP_07583092.1| exodeoxyribonuclease III [Shewanella baltica BA175] gi|304349755|gb|EFM14162.1| exodeoxyribonuclease III [Shewanella baltica OS183] gi|306913697|gb|EFN44119.1| exodeoxyribonuclease III [Shewanella baltica BA175] Length = 270 Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 80/309 (25%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L+ + DI+ LQE ++ Sbjct: 1 MKIVSFNINGL----------------RARLHQLQALIDSHQPDIIGLQETKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K Q G A R Sbjct: 42 -------FPLADVEAMGYQVHYHGGKAHYGVAMLSKVAPEKLQK----GFPTDDEDAQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+ + V + F + + Q L ++ + Sbjct: 91 MIIGTFSQANGRPLTVFN-----GYFPQGESIDHPTKYPAKRKFYQDLMHYLQTNHSNDE 145 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 I GD N ++ KT+ + F + Sbjct: 146 DIAIIGDINISPTDLDIGIGEVNRKRWLKTGKCSFQPEEREWLKTLQDWGLVDTFRQLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 R + ID + + L++ + D + S Sbjct: 206 ERIERYSWFDYRSKGFDDNRGLRIDVILATPSLAARLVES-------DVDYDLRGIDKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|163735846|ref|ZP_02143275.1| exodeoxyribonuclease III, putative [Roseobacter litoralis Och 149] gi|161390932|gb|EDQ15272.1| exodeoxyribonuclease III, putative [Roseobacter litoralis Och 149] Length = 260 Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 80/302 (26%), Gaps = 67/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + L + K D+ LQE+ S + Sbjct: 1 MKIATFNING----------------IKARIDALPAWLKEAQPDVALLQEIKSVDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + ++ +A+ K D +R Sbjct: 42 -------FPRSVFEDMGYNLETHGQKSFNGVAILSKLPLEDVTRGLPGDESDEQARY--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E V + + V ++L + + Y L D + + Sbjct: 92 --IEATVMGDTAPVRVCGLYLPNGNPAPGPKYDYKLD------WMARLYDRVKELLADET 143 Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249 FV+AGD+N + + N L + + + Sbjct: 144 TFVMAGDYNIIPQAEDAAKPESWRDDALFRLESRTAFRKLINLGLTEAFRARTAGPGHYS 203 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A L+ D + SDH P+ I Sbjct: 204 FWDYQAGAWNRNNGIRIDHLLLSPQAADMLVDCQI-------DKDVRGRDKPSDHVPVWI 256 Query: 301 DY 302 D Sbjct: 257 DL 258 >gi|119715318|ref|YP_922283.1| exodeoxyribonuclease III [Nocardioides sp. JS614] gi|119535979|gb|ABL80596.1| Exodeoxyribonuclease III [Nocardioides sp. JS614] Length = 262 Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 26/296 (8%), Positives = 66/296 (22%), Gaps = 50/296 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+L S + + + D++ LQE + Sbjct: 1 MRIATWNVNSL----------------RSRIDRVEAFLDRHEVDVLALQETKARED---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +AV + + Sbjct: 41 ------QLPLMGIEARGYEVAVAGANQWNGVAVISRVGLSDVAVGFPGQPGWAKDVQRAA 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLEN--------TYSPSCSLLSQQAQWLKDWI 195 + + + +++ + D + Q L Sbjct: 95 ETESRAIGATCGGVRIWSLYVPNGRKPDDPHYVYKLDWLARLRDAAQAWRDQDVALVGDW 154 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + F R + ++ + + + Sbjct: 155 N-IAPTDEDVFDMAQFARSTHVTPPERAAFQAFLEDGYVDVVRPHAPGPEVYTYWDYYRQ 213 Query: 256 P--------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID+ + + + D + G SDH P+ +D Sbjct: 214 RYERNRGMRIDFVLGSPSLAARVTGAFI-------DREERAGTGASDHAPVVVDLS 262 >gi|124009034|ref|ZP_01693718.1| endonuclease/exonuclease/phosphatase family [Microscilla marina ATCC 23134] gi|123985354|gb|EAY25269.1| endonuclease/exonuclease/phosphatase family [Microscilla marina ATCC 23134] Length = 343 Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 45/345 (13%), Positives = 85/345 (24%), Gaps = 54/345 (15%) Query: 1 MIRKYVLALV-FFLVPCTASVAQK---V-RLVSWNINTLSEQEGVSLWKN---------- 45 M + VL L+ + V + ++ + + +N+ L + ++ Sbjct: 1 MKKTLVLILLVWGSVTVSQGQGKEKYHLGSIAFYNVENLFDTIDDPEKRDEEYTPEGRRN 60 Query: 46 -SVKRTTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN 100 + R L + L I+ L E+ + V + + + Sbjct: 61 WTTIRYHKKLQNLARVLSKLAGGDAPSIIGLCEVENKQVVEDLVKTGGLKKYNYKIVHYS 120 Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 R I A+ R + L K + R R + + + +G I + Sbjct: 121 SPDR---RGIDVALIYRPEYFAPTFSKSYRLIDK-TNPRFITRDQLLVKGKFDGDDIHFI 176 Query: 161 DIHLKSFCFLDSLENTYSPSCSLL-SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 H S + L A L D + VI GD N N Sbjct: 177 VNHWPSRGGGQKRSEPRRIKAATLTRSIADSLLD-----ADKNAKIVIMGDLNDNPNDKS 231 Query: 220 NNDDF---WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA------YKFL 270 K + + D +M + Sbjct: 232 LTKVLKASGKKPKGKNLYNAMLPLYKKGIGSLAYRDQWYLFDQIIMSKGLVMAKKYTYKY 291 Query: 271 IQESFSEI---------------LYNEDDIKSRGKRLSDHCPISI 300 + +S ++ SDH P+ I Sbjct: 292 VPKSARVFAPKLLKQRGGKYEGYPLRTFGGRTYLGGYSDHFPVYI 336 >gi|78063133|ref|YP_373041.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. 383] gi|77971018|gb|ABB12397.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. 383] Length = 621 Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 85/315 (26%), Gaps = 47/315 (14%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY--------TLLRQYAKNLDADIVFLQEM 74 VR+VS+N+ +G ++ + + + + L AD++ L E+ Sbjct: 295 DVRIVSFNVFNYFNGDGNGGGFDAPAKRGAKTPAAFARQEAKIVAALRALRADVIGLMEI 354 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + R I+ R + I A+ + V P+ A Sbjct: 355 ANNGYGDASAVQRLATQLGDGWRAIDPGTARLGRDAIAVALLYDSRTVE------PIGRA 408 Query: 134 KDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSC------SLLS 185 +R + + V HLKS ++ S + + Sbjct: 409 ATVALGGRHRPPLAQTFRRIGGTRAFTVAVNHLKSKNCPNATGADRDQSDGQGCWNAART 468 Query: 186 QQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + A + DW+ ++ GD N + ++ + Sbjct: 469 RAATRVADWLGTSPAGTAADGVLLIGDLNSYAKEDPV-----RALESRGYANLVARFVGD 523 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIK 286 + +D+ + + I +E Sbjct: 524 AAYSYVFRGEAGSLDHALATPPLAARVKAVHVWHINADEPVALQPVPDYKTSAQRATYYA 583 Query: 287 SRGKRLSDHCPISID 301 R SDH P+ ID Sbjct: 584 PDAYRSSDHDPVVID 598 >gi|301099642|ref|XP_002898912.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262104618|gb|EEY62670.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 583 Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 92/320 (28%), Gaps = 51/320 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 V + ++N+ + + + K T + + DI L E Y A + Sbjct: 65 VSVGTYNVWMMPRKVSAFTSCSPKKNTRARL--IGDLLPPC--DIWVLTECFDYRARDIL 120 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHT---AIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K T ++ + H + + +N + + K + + GA + Sbjct: 121 LDKMTEAGYFFFSPTVGHKRINKSNMRKLLNGGVLLASKYPILSVRVKLFEGACAGADKL 180 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 ++ + + +G + V HL+++ S ++ Q + +++ Sbjct: 181 ADKGVLYCKILKDGLLVHVFSTHLQAW--------NDPLSRTMRKLQMDMIANFMRAMDI 232 Query: 201 S--LVPFVIAGDFNRKINYLG---NNDDFWKTIDPNDS---------------------- 233 + GD N + D+ + D Sbjct: 233 DEVNDVVLFVGDLNVDYHLNKTNQEYDEMLNIFEAKDPSAVHPRKLGNASDSDKKESAAE 292 Query: 234 ------LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 P+ + + +DY + + + S+ + L Sbjct: 293 FKHLRKYSFDPRVNALAADGLSTDGSLELLDYILYSRTHRQPTTASSWVQPLTTSQPWMW 352 Query: 288 RG---KRLSDHCPISIDYDF 304 R LSDH P+ ++ F Sbjct: 353 RNQPQYNLSDHFPVVSEFTF 372 >gi|187736008|ref|YP_001878120.1| Endonuclease/exonuclease/phosphatase [Akkermansia muciniphila ATCC BAA-835] gi|187426060|gb|ACD05339.1| Endonuclease/exonuclease/phosphatase [Akkermansia muciniphila ATCC BAA-835] Length = 336 Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 88/290 (30%), Gaps = 24/290 (8%) Query: 21 AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + VRL++ N N ++ + + + + A+IV L EMG A Sbjct: 62 GEPVRLLTMNAGNYFVPEDPRRSNFQVKYKPVEAREAVAELVRQSGAEIVGLCEMGGEAA 121 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 V + + + + + + +A+ K +S + R Sbjct: 122 VRDLQMRLKRKGVH-----LPYKVLVMRDGEDRGLALLSKYRIADDRSVTDMPVSGEAKR 176 Query: 140 A--GNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R ++ V +G+ ++ IHLKS + + ++A L+D++ Sbjct: 177 KKTMLRGILDATVSMPDGRLFRLVGIHLKS------RLSRDGSAEDTRRREAYALRDYLN 230 Query: 197 QKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + +P ++ GDFN + P++ Sbjct: 231 EALASQDGMPLLLYGDFNDGPSDSAVQVIQGPAKTEYRLNRLKPRDSRGETWTIYYEDGD 290 Query: 255 IP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D+ ++ K L + SDH + ++ Sbjct: 291 TYHSFDHLFLNNTLKKRL-----GRKPPMGILDSPPSLQASDHRGVWVEL 335 >gi|226496457|ref|NP_001148811.1| LOC100282428 [Zea mays] gi|195622288|gb|ACG32974.1| hydrolase [Zea mays] Length = 397 Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 45/340 (13%), Positives = 89/340 (26%), Gaps = 48/340 (14%) Query: 11 FFLVPCTASVAQK--------VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 F +P + +Q RLVS+NI + ++ + S + Sbjct: 53 FAPLPTEQTESQTDGGAARYQFRLVSYNILAQVYVKSTLFPHSPSACLKWKSRSGAILTE 112 Query: 61 AKNLDADIVFLQEMGSYNAV-AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 K+ DAD + +QE+ Y+ K + + Y +A V+K+ Sbjct: 113 LKSFDADFMCIQELDEYDTFYKKNMENSGYSSIYIQRSGDKRDGCGIFYKPKSAELVQKE 172 Query: 120 NV-------------------------RVLQQSYPLLGAKDSFSRAGNR-----RAVELL 149 + + + P + + R + Sbjct: 173 VILYNDLVEKYVPSDNVNSALENNSSAEXXKNAKPDNSKRGDPNDPRVRLKRDCVGLLAA 232 Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209 +++ +L + + + L + + I+ K +IAG Sbjct: 233 FKLSDPCDQILIVANTHIYWDPQWIDVKLAQAKYLLSRVSQFEQLISNKYNCKPSVIIAG 292 Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLI-----RFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 DFN N + D + N +DY + Sbjct: 293 DFNSTPGDKVYNYLLSANLGSTDEAPIKLRSLYAANGGEPEYTNYTPGFTGTLDYIFLSD 352 Query: 265 NAYKFLIQ--ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + SDH PI D+ Sbjct: 353 GSSIKPTSLLRLPRGDSEDVKGGLPNFRHPSDHLPIGADF 392 >gi|284121624|ref|ZP_06386820.1| Endonuclease/exonuclease/phosphatase [Candidatus Poribacteria sp. WGA-A3] gi|283829405|gb|EFC33793.1| Endonuclease/exonuclease/phosphatase [Candidatus Poribacteria sp. WGA-A3] Length = 378 Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 92/307 (29%), Gaps = 40/307 (13%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----GSY 77 +R+ +WNI G + +D L + D++ +QE + Sbjct: 82 DTLRVGTWNIRWFPY--GSPPDRPDHSMAPTDLVWLTCTLVWMQTDLLVIQESLTTSEAR 139 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV-----LQQSYPLLG 132 A +V + + R + H + V + L + Sbjct: 140 AAWDRVLTTLAQQTGDVWQWSVQSCGR--PDGHHVGVLWNASRVTLSTMQSLWRLNSKAT 197 Query: 133 AKDSFSRAGNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + + G R V+ +G V+ +HLKS + + Sbjct: 198 SSQEPCKGGLRPGHYARVQSTHQHGADFHVIGLHLKSGPTVS--------AVGERHAALN 249 Query: 190 WLKDWITQKKESLVPFVIAGDFN-----RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + + + E +I GD N + + + + + F Sbjct: 250 RIDTAVARFLEQDRDVIILGDLNTMGAGDRHSQRSELKYLRRMVAKEEP--GFDDLSPKP 307 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY--------NEDDIKSRGKRLSDHC 296 ++ +D+ ++ ++ + + S Y + + +RLSDHC Sbjct: 308 RCSHYFRGRGEWLDHVLVAKDMTE-MRTRSARVTGYCAVAGCRRIKGEYPPAYRRLSDHC 366 Query: 297 PISIDYD 303 P+ I+ D Sbjct: 367 PVIIEID 373 >gi|327191270|gb|EGE58313.1| putative phosphatase protein [Rhizobium etli CNPAF512] Length = 659 Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 79/315 (25%), Gaps = 65/315 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 V S+NI +G D + + AD++ LQE+ Sbjct: 372 VNFASYNIQYGFGLDG-----------RYDLPRIARSL--EGADVIALQEVTRGFSRNGF 418 Query: 75 -GSYNAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 +A +FP W E V + ++ Sbjct: 419 ADMAADIAALFPDYFWVYGPACDLHVEAPEGVLSPVRGIRFQFGNMVLSRWPIASTRTLL 478 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 L ++ R A E ++ G I V +HL L+ Q Sbjct: 479 LPRSRTLGKINPQRGATEAVINAPGGAIRVYSVHLDHVSPD-----ERIRQLQFLNAQIN 533 Query: 190 WL----------KDWITQKKESLVPFVIAGDFNRKINYLGN-------NDDFWKTIDPND 232 ++ + +VI GDFN + + + Sbjct: 534 AFVREGGSLTGAAEFDLPEPPLPEDYVILGDFNMEPESPEYCALAGAAGGYYGRVARIGT 593 Query: 233 SLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + F + R + ++ +DY + L Sbjct: 594 PVDAFAALEAYRPESYSWMNPEDHGERMHLDYCFVSCGLVSRLQSARI-----------D 642 Query: 288 RGKRLSDHCPISIDY 302 + SDH P+ ++ Sbjct: 643 TQSQGSDHFPLWVEI 657 >gi|145297705|ref|YP_001140546.1| phospholipase C precursor [Aeromonas salmonicida subsp. salmonicida A449] gi|142850477|gb|ABO88798.1| putative phospholipase C precursor [Aeromonas salmonicida subsp. salmonicida A449] Length = 438 Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 49/299 (16%), Positives = 90/299 (30%), Gaps = 42/299 (14%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS- 76 K+++ S+N+ L TLL Y K DA + LQE+ Sbjct: 168 EPSESKLKVASYNVWALPVIASSIG---------ERLTLLPDYLKGYDA--LLLQEVFDG 216 Query: 77 --YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + + + +D I R VR Q YP Sbjct: 217 RREGFLQALAKEYPYQTKVLDKP------GVNIHDGGVVIVSRYPIVREAQLVYPQCTGT 270 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D F+ + V GK + H SF ++ + + Q + L Sbjct: 271 DCFADK---GVMYAEVIKGGKAWHLFATHTASFDTDEARQLR-----QIQFGQIRTLAAS 322 Query: 195 ITQKKESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR- 252 + + + GDFN + + +D ++ + ++ + N Sbjct: 323 LK--IPASDTVIYGGDFNVNKRKFADDYASMLANLDAHEP--GYGGYTEATFDPRINPYA 378 Query: 253 --------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 N +DY V+ + + I + D LSDH P+ + Sbjct: 379 GGPLSGGANVEYLDYLVVSREYGAASHNLNSVWIPRSSDGSLWPASNLSDHFPVKGEIS 437 >gi|268315822|ref|YP_003289541.1| Endonuclease/exonuclease/phosphatase [Rhodothermus marinus DSM 4252] gi|262333356|gb|ACY47153.1| Endonuclease/exonuclease/phosphatase [Rhodothermus marinus DSM 4252] Length = 338 Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 107/321 (33%), Gaps = 49/321 (15%) Query: 10 VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-----TSDYTLLRQYAKNL 64 +F P A+ +R+ + N L + G + + + Q + + Sbjct: 36 LFVPEPPPEYRAEGIRIATLNTFFLFDGYGDEGQTDFPHKGNPEAARRHRARIAQVLRMI 95 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV- 123 +AD+V LQE+ + + ++ ++ + Y + H + A+ R ++ Sbjct: 96 NADLVVLQEVENEEVLRRMVTEDLPDLNYEVHFVQGHD---TFTGQDVAVLSRLPVEKIG 152 Query: 124 -LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 ++ P+ G D++ + N + + + + ++ +H + + S Sbjct: 153 RTEERVPVEGTDDTYGVSKN---IWVRLYLGDLPATIIGVHFLA-------QPDDSRRKP 202 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------------LGNN 221 QA+ ++ + ++ + + GDFN G + Sbjct: 203 RREAQAEVIRRLVERELAAGRAVAVLGDFNDYDESVLDLNGHRPITRTLALVKAAGPGPD 262 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 DD + + RF D+ + ID+ ++ L + + + Sbjct: 263 DDLYNVMAEVPQHDRFTVFYDADEDWQVEWPELAAIDHVLLSPRLRARLREVHYVQAY-- 320 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 + ++DH PI + Sbjct: 321 ------DPRTVTDHFPIVVTL 335 >gi|323494946|ref|ZP_08100037.1| exonuclease III [Vibrio brasiliensis LMG 20546] gi|323310741|gb|EGA63914.1| exonuclease III [Vibrio brasiliensis LMG 20546] Length = 268 Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 84/309 (27%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQAVIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K + Q +D R Sbjct: 42 -------FPLEDVEAMGYKVYFHGQKAHYGVAMLCKKEPISVQKGFPTDNEDHQK----R 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + NG+K+ +L+ F + Q L ++ + Sbjct: 91 MIMVTVEDDNGEKVTILN-----GYFPQGDNINHETKFPYKRQFYSDLMTYLNDHHTNDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ + KT+ + F + Sbjct: 146 QLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSFQPEERQWLKTLLDWGFVDTFRQIHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + I+ + D ++ S Sbjct: 206 DVNDRFSWFDYRSKGFPDNRGLRIDVVLATPKLAEKCIES-------DVDYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|157146023|ref|YP_001453342.1| exonuclease III [Citrobacter koseri ATCC BAA-895] gi|157083228|gb|ABV12906.1| hypothetical protein CKO_01777 [Citrobacter koseri ATCC BAA-895] Length = 268 Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 79/310 (25%), Gaps = 75/310 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLSAIVDKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K V + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPVSVRR-----GFPDDGEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + I V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSPLGSITVIN-----GYFPQGESRDHPLKFPAKAQFYQNLQNYLDNELKRDN 144 Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 P +I GD N + + I+ + F Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLIN-WGLVDTFRHAH 203 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID + + ++ D ++ Sbjct: 204 PETVDKFSWFDYRSKGFDDNRGLRIDLLLASNPLAEHCVETGI-------DYEIRSMEKP 256 Query: 293 SDHCPISIDY 302 SDH P+ + Sbjct: 257 SDHAPVWAKF 266 >gi|75471487|sp|Q9RLV9|PHLC_LISIV RecName: Full=Sphingomyelinase C; Short=SMase; AltName: Full=Sphingomyelin phosphodiesterase; Flags: Precursor gi|6006577|emb|CAA70683.2| sphingomyelinase-c [Listeria ivanovii] Length = 335 Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 40/300 (13%), Positives = 91/300 (30%), Gaps = 33/300 (11%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++ S N+ S ++ N + +D Y K + D+V L E +A Sbjct: 42 PGNFKITSHNVYLFSRN----IYPNWGQMHRADLIAQADYMK--NNDVVILNEAFDTSAS 95 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLG 132 ++ + T + + + +AV + V + + Sbjct: 96 HRLLNNLREMYPHQTPVIGRSKHGWDKTEGNYSNFALEDGGVAVVSQWPIVEKSQHIFQR 155 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + R N+ + + NGK ++ H + D + S ++ ++Q Q ++ Sbjct: 156 GGGA-DRLSNKGFAYVKIMKNGKPYHIIGTHTPA----DDSLISKDTSRAIRAEQMQEIQ 210 Query: 193 DWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN--- 248 +I + I GD N +D +K ++ + + N Sbjct: 211 TFIAKKNIPKDEIIFIGGDLNVNYGTDEYHD-MFKLLNVSSPANFNGQMATWDPTTNSML 269 Query: 249 --KNLR-NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPIS 299 + +DY ++ + + + + SDH P+ Sbjct: 270 KESYPKAAPEYLDYIFVENGHARPHSWHNKVLHTKSPQWSVKSWFKTYTYQDFSDHYPVV 329 >gi|308176500|ref|YP_003915906.1| exodeoxyribonuclease III [Arthrobacter arilaitensis Re117] gi|307743963|emb|CBT74935.1| exodeoxyribonuclease III [Arthrobacter arilaitensis Re117] Length = 279 Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 82/311 (26%), Gaps = 71/311 (22%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +R+ S N+N + + + + D DI+ LQE+ + + + Sbjct: 13 AGALRVASVNVNGIRA---------------AYKRNMADWIAARDVDILCLQEVRAPDKI 57 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + W I ++ + + +AV + V + + R Sbjct: 58 LRDLIGEGWHILHAEAK----------DKGRAGVAVLSRTAPVAVREHIGEDYFAESGRW 107 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 VE E+NG+ V+ ++ S + ++ + L K Sbjct: 108 -----VEADFEVNGEVFTVVSAYVHSGELGTQKQEDKYRFLQRMNVRLVEL-------KN 155 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPN------------------DSLIRFPKEKD 242 ++ GD N + + Sbjct: 156 EKDHVLVVGDLNVVHTQKDIKNWKPNHNKRAGVMDEEIAYFDGFFGPQIGYKDVARELAG 215 Query: 243 SRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + IDY + I+ D + R S Sbjct: 216 DVQGPYTWWSFRGQAFDNDAGWRIDYHMATPALAAKAIKSHV-------DRASAYDLRFS 268 Query: 294 DHCPISIDYDF 304 DH P+ +DY F Sbjct: 269 DHAPLVVDYQF 279 >gi|290998796|ref|XP_002681966.1| predicted protein [Naegleria gruberi] gi|284095592|gb|EFC49222.1| predicted protein [Naegleria gruberi] Length = 354 Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 45/326 (13%), Positives = 93/326 (28%), Gaps = 56/326 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTT-----------------------SDYTLL- 57 R+ S+N+ L + + + + D + Sbjct: 41 HTFRIASFNVENLYGRYCFNKAQMAKISKQCLGRKGSLEFGVNDVQTNLTIADEDSKRIT 100 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + K ++AD++ L E+ S + + + I RD I + R Sbjct: 101 AEAIKQVNADVICLMEVESLQVLDSF--NEKYLQSMNYAYSILIDGRDP-RSIDVGVLSR 157 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENT 176 V + + + + +R +EL +E G + + HL S Sbjct: 158 YPIVNIRSNRHATYPGEKTRY-IFSRDLLELDIEFPGNNNLTIYATHLTSMSKGREESKD 216 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVP---FVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 Q ++ D I + + F++ GD N + + K + + Sbjct: 217 R------RLVQVDYICDRIEKSWKDKNYKGNFIVLGDMNDYNDSETS---LGKLLKHDHM 267 Query: 234 LIRFPKEKDSRC-NANKNLRNKIP--IDYFVMDQNAY---KFLIQESFSE---------I 278 + S + R +DY + ++ F + Sbjct: 268 ADIISQRLPSDEQWTHYYNRGNAYNQLDYMFISKHLLLRNPRAKPVIFRKGLPKRAHSFT 327 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 + + SDHCP+ +D F Sbjct: 328 GKRIKGVGQNEPKASDHCPVYVDLSF 353 >gi|121999062|ref|YP_001003849.1| exodeoxyribonuclease III Xth [Halorhodospira halophila SL1] gi|121590467|gb|ABM63047.1| Exodeoxyribonuclease III [Halorhodospira halophila SL1] Length = 267 Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 95/306 (31%), Gaps = 78/306 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ SWN+N+L ++ +A++ ++ LQE + Sbjct: 1 MKIASWNVNSL----------------KVRLPQVKAWAQSATPSVIALQETKVPDDQFPL 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-VRVLQQSYPLLGAKDSFSRA 140 K + + ++ + +AV ++ + + P Sbjct: 45 KALQEAGYRAAFA------------GQRTYNGVAVLARSAPQDVVTDLPGFADT------ 86 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + V + V+++++ + + S + Y + + L W+ ++ E Sbjct: 87 -QRRVLACTVS----GVRVINLYVPNGQEVGSEKYGYK------LRWLEALHHWVARELE 135 Query: 201 SLVPFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKDSRCN 246 + V+ GDFN +D K + N L+ + + Sbjct: 136 AHEHVVVLGDFNIAPQAADVHDPAEWEGKVLFSQSERDALRGLLNLGLVDTFRLFEQPEG 195 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 ++ ID + + + D R +R SDH P Sbjct: 196 QFSWWDYRVNSFKRNRGLRIDLILASSALARACVAS-------RVDVEPRRWERPSDHAP 248 Query: 298 ISIDYD 303 + ++D Sbjct: 249 VVAEFD 254 >gi|284029915|ref|YP_003379846.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283809208|gb|ADB31047.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 258 Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 41/281 (14%), Positives = 76/281 (27%), Gaps = 39/281 (13%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 VRL++WN+ R + ++L D+V +QE S + Sbjct: 10 VRLMTWNVWGRFGD-----------RWREREDAIVAVVRSLQPDLVAVQEAWSTPETTQ- 57 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + D++ ++ +AV + Q + + G Sbjct: 58 ADVLGARLGLHAAFAKSRMPTDADPEVELGLAVLSRWPLAAVQRHHVRGET--------- 108 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A+ + G ++ + L QA+ L + + Sbjct: 109 VALHIEPAAPGPRVDFVTTCLDW----------EEDHAEQRMAQAKVLDELVRDLTTRDG 158 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---IPIDYF 260 V+AGD N ++ + + S S N IDY Sbjct: 159 LVVLAGDLNAPPDHPEI-SLLTERMTDCWSGRADAGHTYSSGNPYLGHGEWIEDHRIDYI 217 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + L ED+ SDH + D Sbjct: 218 LATHRDPHRLQVLDAGIRGLTEDNGLP----PSDHYAVFAD 254 >gi|194099379|ref|YP_002002479.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae NCCP11945] gi|240014802|ref|ZP_04721715.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae DGI18] gi|240116328|ref|ZP_04730390.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae PID18] gi|240121325|ref|ZP_04734287.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae PID24-1] gi|268601995|ref|ZP_06136162.1| exodeoxyribonuclease III [Neisseria gonorrhoeae PID18] gi|193934669|gb|ACF30493.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae NCCP11945] gi|268586126|gb|EEZ50802.1| exodeoxyribonuclease III [Neisseria gonorrhoeae PID18] Length = 256 Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 87/304 (28%), Gaps = 73/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + DI+ LQE Sbjct: 1 MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ ++V S R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRSVPQDVHF-----GLPSLPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V++++ + LDS + Y Q L +++ + Sbjct: 90 RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRHG 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D +++ + + Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWYEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ L D +R SDH P++ Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDV-------RIDLETRALERPSDHAPVA 251 Query: 300 IDYD 303 ++D Sbjct: 252 AEFD 255 >gi|5802873|gb|AAD51807.1|AF172851_1 unknown [Chromobacterium violaceum] Length = 542 Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 33/275 (12%), Positives = 77/275 (28%), Gaps = 26/275 (9%) Query: 3 RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 R + A + A+ + ++L +WN L +L+ N + + + Sbjct: 5 RFLLCAALSLPAASHAAYPEDLKLATWNAMLLP----QALYPNYGQMRRVELMAAAPILQ 60 Query: 63 NLDADIVFLQEMGSYNAVAKVFPKNTWCIFY-------STERLINHSKRDSNNDIHTAIA 115 D++ QE+ A K+ Y + + + +A Sbjct: 61 AQ--DVLVFQELQDNAASDKLLALLRPRFPYQTPVIGRAQQGWDGTEGWNGMKPEDGGVA 118 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + + V ++ Y S+ + + +NG+ V+ HL+S + Sbjct: 119 IASRWPIVEKRQYLFQTPGCSWDGQALKGFAYARIAVNGQFYHVIGTHLQS----EDSGC 174 Query: 176 TYSPSCSLLSQQAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS- 233 + Q + + W+ + ++AGD N + + Sbjct: 175 ANHADIGVRQAQLREIAAWVQSRHLPVEETVIVAGDMNIDRYKSAEYRAMLDILQAGEPR 234 Query: 234 -------LIRFPKEKDSRCNANKNLRNKIPIDYFV 261 + +DY + Sbjct: 235 YAGMPHSFDTAGNGIALERYGARGGDAPEYLDYIL 269 >gi|126739194|ref|ZP_01754888.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. SK209-2-6] gi|126719811|gb|EBA16519.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. SK209-2-6] Length = 331 Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 102/330 (30%), Gaps = 51/330 (15%) Query: 24 VRLVSWNINTL----SEQEGVSLWKNSVKRTTSDY----TLLRQYAKNLDADIVFLQEMG 75 +RL ++N+ Q+ + L + R D L + LDAD + + E Sbjct: 1 MRLATYNVEWFANLFGPQDQLLLDDHPSGRYGIDRYSQAMALAAVFQRLDADAILVVEAP 60 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + + ND H IA+ + + P K Sbjct: 61 NTGREQRSTRALA-NFAAEAGLRTSEAIAGFANDTHQEIALLYDPAVLSVRHDPKSAPKA 119 Query: 136 SFSRAGNRRAVELL-----------------VEINGKKIWVLDIHLKSFCFLDSLENTY- 177 R +++ +G+ I ++ HLKS + Sbjct: 120 PRFDGVFRIDLDVDDQMDEVRFSKPPLELALTTKSGRAIRLIGAHLKSKAPHGARNEEDV 179 Query: 178 ----SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK------- 226 + QA WL + Q ++ ++ GD N F + Sbjct: 180 VQISIANRRKQLAQAIWLHRRVKQHVQAREDLIVLGDLNDGPGLDEYERLFGRSSVEIVM 239 Query: 227 ---TIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAY----KFLIQES 274 DP+ + P+ N +DY ++ + K+ I Sbjct: 240 GQELTDPHAQSLLKPRRHVLPSTSRFFNPETKRYFSALLDYVMISNSLLSGEPKWRIWHP 299 Query: 275 FSE-ILYNEDDIKSRGKRLSDHCPISIDYD 303 F + Y ++D+++ SDH P+++D + Sbjct: 300 FEDAECYEDEDLRNALLAASDHFPVTLDLN 329 >gi|325293099|ref|YP_004278963.1| exodeoxyribonuclease III [Agrobacterium sp. H13-3] gi|325060952|gb|ADY64643.1| exodeoxyribonuclease III [Agrobacterium sp. H13-3] Length = 265 Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 86/304 (28%), Gaps = 66/304 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + L Q+ K+ DIV LQE+ S V + Sbjct: 1 MKIATWNING----------------VKARIENLCQWLKDSSPDIVCLQEIKS---VDEG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + +A+ K D +R Sbjct: 42 FPRLELEAL-------GYHVETHGQKGFNGVALLSKMKPDEINHGLPGDDADEQARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + ++G I V ++L + D + L+ + + Sbjct: 92 --IEGVFSVDGGAIRVCSLYLPNGNPPDDPVK-----YPYKLAWMERLRRFAEDRLALEE 144 Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIRFPKEKDSRCNANK 249 P ++AGD+N + + N + Sbjct: 145 PLILAGDYNVIPEPFDCHDPRVWAGDALFLPKTRSAFRRLENLGFTDAARATTDEPGLYS 204 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A L S + + ++ SDH P+ Sbjct: 205 FWDYQAGAWPKNNGIRIDHLMLSAEAADRLESVSIEKHV-------RAWEKPSDHVPVCG 257 Query: 301 DYDF 304 ++F Sbjct: 258 YFNF 261 >gi|323465309|gb|ADX77462.1| beta-hemolysin [Staphylococcus pseudintermedius ED99] Length = 330 Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 49/300 (16%), Positives = 102/300 (34%), Gaps = 34/300 (11%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++L + N+ LS L+ N + +D +Y + D D+V E + + Sbjct: 39 ELKLATHNVYMLS----GFLYPNWGQSKRADLISKSKYIQ--DNDVVIFNEAFYPASANQ 92 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGAK 134 +F Y T L + + H +A+ K + + + Sbjct: 93 LFNNLKSSYPYQTAVLGRSTSGWDRTEGHYSSTTFENGGVAIVSKYPIRERIQH-IFQHG 151 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 F N+ V +E NGK + V+ H +S + + ++ ++Q + + ++ Sbjct: 152 CGFDNDSNKGFVYTKIEKNGKFVHVIGTHTQS----EDTRCSVGQDRAIRAEQMKEISNF 207 Query: 195 IT-QKKESLVPFVIAGDFNRKINY-LGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNA 247 + + I GD N N G D K ++ +D Sbjct: 208 VKSKNIPKDEVVYIGGDMNVNKNAGNGEFQDMLKNLNVSDVTYTGHSSTWDPQSNSIAKY 267 Query: 248 NKNLRNKIPIDYFVMDQNAYK-------FLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 N +DY +D++ + + ++S + +Y + SDH P+ Sbjct: 268 NYPNSAPEYLDYIFVDKDHRQPGQLINEAVAEKSPTWDVYKFPYLYVYNDY-SDHYPVKA 326 >gi|55379934|ref|YP_137784.1| hypothetical protein rrnAC3397 [Haloarcula marismortui ATCC 43049] gi|55232659|gb|AAV48078.1| unknown [Haloarcula marismortui ATCC 43049] Length = 277 Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 32/292 (10%), Positives = 77/292 (26%), Gaps = 33/292 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 C + + R++S+N+ + +GV W + L+ + + DI+ +QE Sbjct: 10 CQRTHMKPTRVMSFNVRYDTAGDGVDGWPH-------RRRLVAGTIQYHNPDIIGVQEAM 62 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 ++ + + ++ + P + Sbjct: 63 AHQLRELEVLLDGYEWVGDPRESVDAGGEHTAIGYRAERFDCAATNTFWLSEQPAEPSSV 122 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + A R A + +L ++ + + + D + Sbjct: 123 GWDAAYPRVATWARLRDRDTDDDLLCLNTHL----------DHQGADARVEGIELVLDHL 172 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR--- 252 P V+ GDFN + + L+ + Sbjct: 173 DS-ATRDAPAVVMGDFNCVVGEPAYERAEGHELPDGRRLVDTRNTATVTHGPTTSRTDFH 231 Query: 253 ---NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 ++ ID+ + ++ + SDH P+ +D Sbjct: 232 DLLPEMGIDHVFVSEDVA---------VDTRAVIADRDDDHYGSDHLPVVVD 274 >gi|146311351|ref|YP_001176425.1| exonuclease III [Enterobacter sp. 638] gi|145318227|gb|ABP60374.1| Exodeoxyribonuclease III [Enterobacter sp. 638] Length = 268 Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEQHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEDVAKLGYNVFYHGQKGHYGVALLTKQTPISVRR-----GFPGDDGEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + I V++ F + ++ Q L+D++T + Sbjct: 90 RIIMAEIPSPLGNITVIN-----GYFPQGESRDHPTKFPAKAKFYQDLQDYLTTELNKEN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + + F Sbjct: 145 PVLIMGDVNISPTDLDIGIGEDSRKRWLRTGKCSFLPEEREWMQRLQSWGLVDTFRAANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + I+ D ++ S Sbjct: 205 DTQDRFSWFDYRSKGFDDNRGLRIDLLLASAPLAERCIETGI-------DYDIRGMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWAKF 266 >gi|134291232|ref|YP_001115001.1| endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis G4] gi|134134421|gb|ABO58746.1| Endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis G4] Length = 263 Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 80/288 (27%), Gaps = 56/288 (19%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 P A +R+ ++NI+ + + LDAD++ LQ Sbjct: 18 AAPAGAPRGHDLRIATYNIHG-----------GYGAWPARAVERIVAVIRELDADVIALQ 66 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ P + +T + AV + ++ L Sbjct: 67 EVPLGGTR---APDVLAHLRDATGMHAAAGPTIDTPERRYGNAVLSRCPIRAARTLDL-- 121 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 SF + R A++ ++ + I V+ HL S + S Q Q L Sbjct: 122 ---SFHQREPRGALDADIDCSAGPIRVVATHLGL-------------SANERSAQVQRL- 164 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + +P ++ GD N + F + RF + R Sbjct: 165 --LAAFDTGAMPVILMGDIN---------EWFVRGRALQALTTRFRRAPAPRTFPTAWPV 213 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +D + ++ + SDH P+ Sbjct: 214 FS--LDRIWIHPG----------ELLVDVAVHRSMLARHASDHYPLVA 249 >gi|120598407|ref|YP_962981.1| exonuclease III [Shewanella sp. W3-18-1] gi|146293514|ref|YP_001183938.1| exonuclease III [Shewanella putrefaciens CN-32] gi|120558500|gb|ABM24427.1| Exodeoxyribonuclease III [Shewanella sp. W3-18-1] gi|145565204|gb|ABP76139.1| Exodeoxyribonuclease III [Shewanella putrefaciens CN-32] Length = 270 Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 80/309 (25%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L S L+ + DI+ LQE ++ Sbjct: 1 MKIVSFNINGL----------------RSRLHQLQALIDSHKPDIIGLQETKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K Q G A R Sbjct: 42 -------FPLAEVEAMGYQVHYHGGKAHYGVAMLSKVAPQKIQK----GFPSDDEDAQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+ + V + F + + Q L ++ + Sbjct: 91 MIIGTFSQANGRPLTVFN-----GYFPQGESIDHPTKYPAKRKFYQDLMHYLQTNHSNDE 145 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 I GD N ++ KT+ + F + Sbjct: 146 DIAIIGDINISPTDLDIGIGEVNRKRWLKTGKCSFQPEEREWLKTLQDWGLIDTFRQLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 R + ID + + L++ + D + S Sbjct: 206 ERTERYSWFDYRSKGFDDNRGLRIDVILATPSLAARLVES-------DVDYDLRGIDKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|323443048|gb|EGB00669.1| beta-hemolysin [Staphylococcus aureus O46] Length = 331 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 55/298 (18%), Positives = 91/298 (30%), Gaps = 32/298 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++LVS N+ LS L+ N + +D Y K + D+V E A K Sbjct: 43 DLKLVSHNVYMLST----VLYPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDK 96 Query: 83 VFPKNTWCIFYSTE--------RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + Y T S +A+ K + + Sbjct: 97 LLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC 156 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 F N+ V +E NGK + V+ H +S + + ++Q + + D+ Sbjct: 157 -GFDNDSNKGFVYTKIEKNGKNVHVIGTHTQSEDSRCGTGHDRK----IRAEQMKEISDF 211 Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNAN 248 + + I GD N D K ++ ND L N Sbjct: 212 VKKKNIPKDETVYIGGDLNVN-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYN 270 Query: 249 KNLRNKIPIDYFVMDQNAYK--FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300 +DY D++ + L+ E +E D + SDH PI Sbjct: 271 YPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 328 >gi|241766052|ref|ZP_04763968.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN] gi|241363933|gb|EER59221.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN] Length = 249 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 88/289 (30%), Gaps = 54/289 (18%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + +R+ ++NI+ + + L + LDADIV LQE+ + Sbjct: 7 SSDILRVATYNIH--------KGVQGIGPARRLEIHNLGLAVEQLDADIVCLQEVRKVH- 57 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSN------NDIHTAIAVRKKNVRVLQQSYPLLGA 133 + W E L A+ + + Q Sbjct: 58 RREAAYFERWPDVPQAEYLAPEGYEAVYRTNAFTRHGEHGNALLSRWPVIGHQH-----E 112 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 S R R + + ++ +G+++ V+ +HL +Q + L+ Sbjct: 113 DISDHRFEQRGLLHVELDAHGRRVHVIVVHLGLIPGS-------------RVRQVERLQQ 159 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 +I ++ + P V+AGDFN D + + + R Sbjct: 160 FIEREVPTGSPVVVAGDFN---------DWGLQIKRMLSGFGLYEFDA-PRAFTYPARLP 209 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D+ + L R+SDH P+ ++ Sbjct: 210 LVQLDHVYVRG-----LSPIGLHVPRGRI------WWRMSDHLPLIAEF 247 >gi|239928478|ref|ZP_04685431.1| hypothetical protein SghaA1_09638 [Streptomyces ghanaensis ATCC 14672] gi|291436804|ref|ZP_06576194.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291339699|gb|EFE66655.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 290 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 40/291 (13%), Positives = 86/291 (29%), Gaps = 61/291 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--- 79 +R+ ++NI+ + + V D + ++L AD++ LQE+ + Sbjct: 43 PLRVATYNIHAGAGADQVF-----------DLDRTARAVRDLRADVIGLQEVDVHWGARS 91 Query: 80 -----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + K +F++ ++ + +AV + + +++ + Sbjct: 92 DFVDEARALAGKLGMRVFFAPIYDLDPATPG-GERRRFGVAVLSRYPVLEAENHEITRLS 150 Query: 135 DSFSRAGNRRA---VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 A E+ V + G + V HL Y S+ + Q + Sbjct: 151 TQTPDPVPAPAPGFAEVTVAVRGAHVHVYSTHL-----------DYRADPSIRAAQVADM 199 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 + + P V+ GDFN + W+ + + Sbjct: 200 LEVL---AADRGPKVLVGDFNAEATAAEL-APLWRRLRDAAP---------GGGGTYPAV 246 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID + + ++ R SDH P+ D Sbjct: 247 DPVKRIDLVTVSPDI--------------TVVGAEAVATRASDHRPVVADL 283 >gi|188574659|ref|YP_001911588.1| nuclease [Xanthomonas oryzae pv. oryzae PXO99A] gi|188519111|gb|ACD57056.1| nuclease [Xanthomonas oryzae pv. oryzae PXO99A] Length = 572 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 85/324 (26%), Gaps = 35/324 (10%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60 L L V +R+ S+ + G + ++ + L Sbjct: 256 LTLPAMPTAVAPQVGGDLRIASFKLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 315 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIA 115 L AD+ L E+ + A + I+ + I I Sbjct: 316 IVPLGADVAALMELENDGNAADAAVAQLVAALNAAGKDKDWHFIDSGSGPGADAIRVGIV 375 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE-LLVEINGKKIWVLDIHLKS-FCFLDSL 173 R V + + L G +R + + G V+ H KS C S Sbjct: 376 YRSSQVTPVGKPATLTGGPFDNH---SRVPLAQAFLSTRGATFVVVANHFKSKGCGNASG 432 Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWK 226 + A+ L +W+ V+ GDFN + Sbjct: 433 ADADQQDGQACWNATRTESAKGLHEWLQTDPTGAQTKRAVLVGDFNAYAMEMPMRS---- 488 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + + F + + + D+ ++ K L I + D Sbjct: 489 -LRASGWQDAFAVAGVKQPYSFVDDGMSGRQDHALLSPAMAKQLRGAVEWHINADVMDAA 547 Query: 287 SRG-------KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 548 GYAKRNLPGPWRSSDHDPVLLGFS 571 >gi|294141585|ref|YP_003557563.1| exodeoxyribonuclease III [Shewanella violacea DSS12] gi|293328054|dbj|BAJ02785.1| exodeoxyribonuclease III [Shewanella violacea DSS12] Length = 268 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 89/309 (28%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN + L+ DI+ LQE A +V Sbjct: 1 MKIVSFNING----------------IRARLHQLQALIDAHQPDIIGLQE---TKAHDEV 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + H +A+ K + Q G A R Sbjct: 42 FPA-------ADVEAMGYKVHYHGGKAHYGVAMLSKLEPIKVQK----GFPTDSEDAQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+ + VL+ F ++ Q + L ++ + Sbjct: 91 MIMATFTQENGRPLTVLN-----GYFPQGDNISHETKYPAKRQFYKDLMTYLNENHTPDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 I GD N ++ ++ KT+ + F + Sbjct: 146 DIAIIGDINISPMDLDIGIGEPNAKRWLRTGKCSFQPEEREWLKTLMDWGLVDTFRELHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 R + ID + ++ + L++ + D ++ S Sbjct: 206 ERTERYSWFDYRSKGFVDNRGLRIDVVLATKSLNERLVES-------DVDYDLRAIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSSF 267 >gi|289207194|ref|YP_003459260.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. K90mix] gi|288942825|gb|ADC70524.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. K90mix] Length = 255 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 80/304 (26%), Gaps = 74/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N+L + + + DI+ LQE Sbjct: 1 MKIASWNVNSL----------------KVRLPQVLDWLGSSRTDILALQET--------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + S + +A+ + + P R Sbjct: 36 -KLTDENFPVSAIHEAGYEVVYSGQKTYNGVAILSRTQATDVVTDP------PGLEDAQR 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + I V+++++ + + + + Y ++ W+ + E+ Sbjct: 89 RILAATI----GDIRVVNLYVVNGENVGTEKYAYKLD------WLARMRSWLAAEIEAHP 138 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN +D + F + + Sbjct: 139 KLVVLGDFNIAPEDRDVHDPEAWHERILCSTPEREALAALTELGLADTF-RAFEQPEEEF 197 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID + K L D +R SDH P+ Sbjct: 198 SWFDYRAASFRRNRGLRIDLVLASPALLKRLTAAGI-------DREPRGWERPSDHAPVW 250 Query: 300 IDYD 303 ++ Sbjct: 251 AEFS 254 >gi|15965796|ref|NP_386149.1| hypothetical protein SMc04274 [Sinorhizobium meliloti 1021] gi|15075065|emb|CAC46622.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021] Length = 368 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 59/366 (16%), Positives = 118/366 (32%), Gaps = 85/366 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVK----------RTTSDYTLLRQY------------ 60 +RL ++NI L + S ++N +K R+ ++Y L + Sbjct: 2 SLRLATFNIENLMSRFDFSGFRNQLKQDRVLRLFDVRSEAEYQRLEEARTIAHTDDTRQM 61 Query: 61 ----AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + DADI+ LQE + A+ + + + R + + + I A+ + Sbjct: 62 SALAIADCDADILCLQEADNMAALQAFEYGYLFRMAGNGYRQKYLVEGNDSRGIDVAVLM 121 Query: 117 RK------KNVRVLQQSYPLLGAKDSF-------------SRAGNRRAVELLVEINGKKI 157 R+ K + +S+ L +D R R +E+ V I G+ + Sbjct: 122 REETRDGQKIECLEVKSHAALTYEDLDLFNDELALTNRPRDRIFKRDCLEVDVRIGGRPL 181 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV----PFVIAGDFNR 213 + +HLKS + + ++ + + ++ I ++ F I+GD N Sbjct: 182 TLYVVHLKSMGPAREGLDGRQATMAVRIAEVKAVRHIIERRFGRGHTADKVFAISGDMND 241 Query: 214 ---KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------------- 254 K+ LG+ + ++ + ++ N NLR Sbjct: 242 YQEKVKVLGDRRNGYEFLPHEETTSALDVLSHDGFVENPNLRRPVLDRWTLFHSRGPEDR 301 Query: 255 --IPIDYFVMDQNAYKFLIQESFSEILY---------------NEDDIKSRGKRLSDHCP 297 +DY + + I + SDHCP Sbjct: 302 HLCQLDYIWLSPELARRNAARLPEIIRAGQPYRTIFPAGQEVERYPRTGWDRPKASDHCP 361 Query: 298 ISIDYD 303 + + D Sbjct: 362 VVMTLD 367 >gi|325918813|ref|ZP_08180896.1| putative extracellular nuclease [Xanthomonas vesicatoria ATCC 35937] gi|325534959|gb|EGD06872.1| putative extracellular nuclease [Xanthomonas vesicatoria ATCC 35937] Length = 1032 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 37/340 (10%), Positives = 92/340 (27%), Gaps = 54/340 (15%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69 P A V + ++N+ + + + +N D++ Sbjct: 415 PAPLPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNYLHAPDVL 474 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK------- 118 E+ + + + + + + ++ + + + I V+ Sbjct: 475 GTVEVENLSVLQTLAARINADAVAAGQQDPRYVAYLQEGNDVGGIDVGFLVKTAEVAGGV 534 Query: 119 KNVRVLQ-----QSYPLLGAKDSFSRAGNRRAVELLVEINGK-----KIWVLDIHLKSFC 168 + V VL ++ S +R + L ++ + + +H +S Sbjct: 535 QRVEVLSIAQEGKTTTWTEPAGGVSLLNDRPPLVLTANVHQADGRTLPLTAIVVHQRSLN 594 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFW- 225 ++ + + + QA++L + Q+ ++ GDFN G D Sbjct: 595 GAETDDAAGTRIRAKRQAQAEYLARLLQTRQQVNPDEKVLVMGDFNAFEFNDGYVDAMGT 654 Query: 226 -----------------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 + D ++ + N +D+ + + Sbjct: 655 VTGKPAPDAQTVVGGDGADLVDPDYTDLTWFNTPNQSYSYAFDGNVQSLDHILASDALMR 714 Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300 S + RLSDH P + Sbjct: 715 APQIASLLVGHARINADFPGTARNDANTPTRLSDHDPTVV 754 >gi|296273651|ref|YP_003656282.1| endonuclease/exonuclease/phosphatase [Arcobacter nitrofigilis DSM 7299] gi|296097825|gb|ADG93775.1| Endonuclease/exonuclease/phosphatase [Arcobacter nitrofigilis DSM 7299] Length = 517 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 97/353 (27%), Gaps = 80/353 (22%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLW----------KNSVKRTTSDY 54 + + ++A+ + S+N+ + + + + Sbjct: 2 IIRTIFLIFFTYNLTLAKDFTVASYNVENFFDLKYDKTEYKEFIPNTKSNWNKTTYNTKL 61 Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 + + +LD D++ LQE+ S A ++ + ++ S + Sbjct: 62 KHIVKVINDLDKDVIALQEVESKQAFDELAKNLPQYKYSIFKKYKTSS---------IGL 112 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 A+ K D NR +++ + I+ K V + H S Sbjct: 113 AILSKYEI------SDYKLIDVKHSKVNRPILKVTLNIDNHKFIVFNNHWPS-------- 158 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------LG 219 S AQ ++++I V +VI GD N N G Sbjct: 159 --KRNEESQRVLYAQAIEEYIK-NLNEDVDYVILGDLNSNYNEFETFKYSKLNNTYDLTG 215 Query: 220 NNDDFWKTIDPND-------------SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 ND +I + + ++ + K D V+ + Sbjct: 216 INDVLNTSIKGKFISKNEILKYDKKVHYNLWLELNYNQRFSYKFRGENETPDNIVLPKAL 275 Query: 267 YK----FLIQESFSEI------------LYNEDDIKSRGKRLSDHCPISIDYD 303 + + SF + + + SDH PI + Sbjct: 276 FDNKNISYVNNSFQVFKPNYLIKDGKIFRWKIKNNIHQNIGYSDHLPIYATFT 328 >gi|300716986|ref|YP_003741789.1| exodeoxyribonuclease III [Erwinia billingiae Eb661] gi|299062822|emb|CAX59942.1| Exodeoxyribonuclease III [Erwinia billingiae Eb661] Length = 272 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 81/311 (26%), Gaps = 75/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + H +A+ K+ + + ++S R Sbjct: 42 FP-------LEEVSKLGYHVFYHGQKGHYGVALLTKDEPLAVRRGFAGDDEES-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + VL+ F + + + L+ ++ ++ Sbjct: 90 RMIMADIATPVGTLTVLN-----GYFPQGESRDHPTKFPAKEKFYRDLQSYLENDQKPTN 144 Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 P VI GD N + + + + Sbjct: 145 PVVIMGDMNISATDLDIGIGEDNRKRWLRTGKCSFLPEEREWMDRLMGWGLVDTWRAENA 204 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 ++ + + ID + Q + D ++ Sbjct: 205 EAN-DRFSWFDYRSKGFDDNRGLRIDLVLASQPLAARCVATGI-------DYDIRSMEKP 256 Query: 293 SDHCPISIDYD 303 SDH PI ++ Sbjct: 257 SDHAPIWAQFN 267 >gi|221134651|ref|ZP_03560954.1| exonuclease III [Glaciecola sp. HTCC2999] Length = 269 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 72/310 (23%), Gaps = 72/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN + L+ + D++ LQE+ NA Sbjct: 1 MKIISFNING----------------IRARLHQLQALIDSHSPDVIGLQEIKVDNA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + + H +A+ KN + Q G R Sbjct: 41 ------QFPISDVEAMGYHVVYHGQKAHYGVAMLTKNPPISVQ----YGLPSDTDEHQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 L NGK I + + F + + L + Sbjct: 91 LIAVTLPTNNGKDITIYN-----GYFPQGENIKHDTKFPYKVDFYRDLTAHLAATHGPDD 145 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N D T+ F Sbjct: 146 QVIVMGDINISPTDLDIGIGPDNAKRWLRSGKCSFQPIERDMLATLQALGYHDTFRCLTP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + + ID + + D ++ S Sbjct: 206 EKTDRYSWFDYRSKGFVDNRGLRIDVILASTTLLPLCTESEI-------DYELRGIEKPS 258 Query: 294 DHCPISIDYD 303 DH PI + Sbjct: 259 DHAPIFAVFS 268 >gi|113971368|ref|YP_735161.1| endonuclease/exonuclease/phosphatase [Shewanella sp. MR-4] gi|113886052|gb|ABI40104.1| Endonuclease/exonuclease/phosphatase [Shewanella sp. MR-4] Length = 870 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 45/378 (11%), Positives = 101/378 (26%), Gaps = 88/378 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQ----EGVSLWKNSVKRTTS----DYTLLRQYAKNLDA 66 + + +R+ S+N+ + N T + ++A Sbjct: 455 APSVATKGDIRVASFNVLNFFNDVVGGDTNPSGSNRGALTEEEMLLQRAKIVSAITAMNA 514 Query: 67 DIVFLQEMGSYNAVAKVF-------------PKNTWCIFYSTERLINHSKRDSNNDIHTA 113 DIV L E+ + K +N + T+ K ++ I Sbjct: 515 DIVGLMEIANNGFGEKSAIKNLVDALNEKQTAENAYSFVEITDEDKYDGKYFGSDAITVG 574 Query: 114 IAVRKKNVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155 + R V + + + + + A R ++ +I+ + Sbjct: 575 MLYRAGKVSLAGAARAIDTPEQHATAGSVTRVKDGKTETNPGNDAYQRHSLAQTFKIHEQ 634 Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES--- 201 + V+ HLKS + + A+ L + + K Sbjct: 635 NLTVVVNHLKSKGSGCLEDWVNFEESVDPADQQGKCNAFRVSAAKVLGEALKDVKGDLLV 694 Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPK 239 P + D++ + W T+D + + Sbjct: 695 IGDMNAYGMEDPIRVLTDYDASKSERDIMTASWTTLDGKVFERQGSKIEKGYGLINLNTQ 754 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291 + + +D+ + + + K L+ I E ++ GK+ Sbjct: 755 AHGAGTYSYSYNGELGNLDHALANTSLAKRLVDIEDWHINSVESNLFEYGKKFSGELAKS 814 Query: 292 -----LSDHCPISIDYDF 304 SDH P+ + + Sbjct: 815 ENAFSASDHDPVIVALSY 832 >gi|114046447|ref|YP_736997.1| endonuclease/exonuclease/phosphatase [Shewanella sp. MR-7] gi|113887889|gb|ABI41940.1| Endonuclease/exonuclease/phosphatase [Shewanella sp. MR-7] Length = 870 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 45/378 (11%), Positives = 101/378 (26%), Gaps = 88/378 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQ----EGVSLWKNSVKRTTS----DYTLLRQYAKNLDA 66 + + +R+ S+N+ + N T + ++A Sbjct: 455 APSVATKGDIRVASFNVLNFFNDVVGGDTNPSGSNRGALTEEEMLLQRAKIVSAITAMNA 514 Query: 67 DIVFLQEMGSYNAVAKVF-------------PKNTWCIFYSTERLINHSKRDSNNDIHTA 113 DIV L E+ + K +N + T+ K ++ I Sbjct: 515 DIVGLMEIANNGFGEKSAIKNLVDALNEKQTAENAYSFVEITDEDKYDGKYFGSDAITVG 574 Query: 114 IAVRKKNVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155 + R V + + + + + A R ++ +I+ + Sbjct: 575 MLYRAGKVSLAGAARAIDTPEQHATAGSVTRVKDGKTETNPGNDAYQRHSLAQTFKIHEQ 634 Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES--- 201 + V+ HLKS + + A+ L + + K Sbjct: 635 NLTVVVNHLKSKGSGCLEDWVNFEESVDPADQQGKCNAFRVSAAKVLGEALKDVKGDLLV 694 Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPK 239 P + D++ + W T+D + + Sbjct: 695 IGDMNAYGMEDPIRVLTDYDASKSERDIMTASWTTLDGKVFERQGSKIEKGYGLINLNTQ 754 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291 + + +D+ + + + K L+ I E ++ GK+ Sbjct: 755 AHGAGTYSYSYNGELGNLDHALANTSLAKRLVDIEDWHINSVESNLFEYGKKFSGELAKS 814 Query: 292 -----LSDHCPISIDYDF 304 SDH P+ + + Sbjct: 815 ENAFSASDHDPVIVALSY 832 >gi|88607141|ref|YP_505100.1| exodeoxyribonuclease III [Anaplasma phagocytophilum HZ] gi|88598204|gb|ABD43674.1| exodeoxyribonuclease III [Anaplasma phagocytophilum HZ] Length = 273 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 85/310 (27%), Gaps = 69/310 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++WN+N L D+ LQE+ N Sbjct: 2 IRVITWNVN----------------SIRKRIEHLCSVLSEHSIDVAMLQEIKCTNE---- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK------DSF 137 + + + +A+ K V SY +L S+ Sbjct: 42 ------QFPFVELEALGYKCYVHGQKSRNGVAIISKLPVVEVVSYSVLDEGKELESAGSY 95 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 S +R L KKI V+ +++ + ++S Y + + LKD + Sbjct: 96 SSEESRYIECTLECTGNKKIRVVSVYVPNGQEVESETFFYK------LKFLEHLKDRLLN 149 Query: 198 KKESLVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKD 242 ++ + GDFN + +D ++ I N + F Sbjct: 150 IMKTEDFLIAGGDFNVAPEEIDVHDPKALDGRLCFHILERAKFREILNNGIVDIFRTFVG 209 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + ID + ++ S + S Sbjct: 210 IDRKEFSWWNYREGGWQNNRGLRIDALLSSPQIADKVLDCSILSKV-------RGWDTPS 262 Query: 294 DHCPISIDYD 303 DH P+ D D Sbjct: 263 DHAPVMGDID 272 >gi|307942540|ref|ZP_07657888.1| exodeoxyribonuclease III [Roseibium sp. TrichSKD4] gi|307774179|gb|EFO33392.1| exodeoxyribonuclease III [Roseibium sp. TrichSKD4] Length = 269 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 85/310 (27%), Gaps = 72/310 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYN 78 +++LV+WNIN ++ + + D++ LQE N Sbjct: 2 TNRLKLVTWNIN----------------SVRLRMPIVERLLAEVQPDVLCLQETKCPDAN 45 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 K F + + + +A + + DS Sbjct: 46 FPEKAFKAAGYNHIA-----------INGQKGYHGVATVSRLPLSNVEKREFCQMGDSRH 94 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + + VE+ G+ + V + ++ + D + + + +K+W+T Sbjct: 95 -------IAVDVELAGQAVRVHNFYVPAG--GDEPDPEKNDKFDHKLKFMNEMKNWLTGP 145 Query: 199 KESLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 + + P V+ GD N + + F + + L + Sbjct: 146 ETAK-PAVLVGDLNVAPYEHDVWSHKQLLKVVSHTPIETELFEAVRESGNWLDAMRQFTP 204 Query: 243 SRCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + +D+ + + ++ Sbjct: 205 MEEKLYTWWSYRAKDWSKADKGRRLDHVWVSDPLKSAIKSTEV-------LRDARGWEKP 257 Query: 293 SDHCPISIDY 302 SDH P+ D+ Sbjct: 258 SDHAPVVADF 267 >gi|99081700|ref|YP_613854.1| endonuclease/exonuclease/phosphatase [Ruegeria sp. TM1040] gi|99037980|gb|ABF64592.1| Endonuclease/exonuclease/phosphatase [Ruegeria sp. TM1040] Length = 344 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 46/329 (13%), Positives = 94/329 (28%), Gaps = 49/329 (14%) Query: 24 VRLVSWNINTL----SEQEGVSLWKNSVKRTT----SDYTLLRQYAKNLDADIVFLQEMG 75 +RL ++NI Q+ + L R + + + +DAD + + E Sbjct: 1 MRLSTYNIEWFEALFDAQDQLQLDSAPSARHEISRGAQAEAIADVLRAIDADGIVIIEAP 60 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKK-----NVRVLQQSYP 129 + ++ R + ++ A + + P Sbjct: 61 NSGKHQSTERALVRFAEWAGLRTRDVVMGFANDTRQEIAFLFDSNVLTAEHAPLDTARAP 120 Query: 130 LLGAKDSFSRAGNRRAVELLVEIN----------GKKIWVLDIHLKSFCFLDSLENTYSP 179 + +A + G ++ HLKS + + Sbjct: 121 RFDGTFEMDLDVDAKADLVRFSKPPMELLVTPRTGPPFHLIGAHLKSKAPHGARTPEEAR 180 Query: 180 SC-----SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-------- 226 + QA WL+ + + E+ P V+ GD N F + Sbjct: 181 AMSIANRRKQLAQAVWLRARVEDRLEAGAPLVVMGDLNDGPGLDAYEALFGRSSVEIIMG 240 Query: 227 --TIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYK----FLIQESF 275 DP+ + P ++ +A + +DY ++ + I F Sbjct: 241 QELFDPHARHLLRPNQQGLPTSARFYNHLEGRYFQALLDYIMISPPLQACAPRWRIWHPF 300 Query: 276 SE-ILYNEDDIKSRGKRLSDHCPISIDYD 303 + Y + SDH P+++D D Sbjct: 301 EDAACYGTPSLCHALLTASDHFPVTLDLD 329 >gi|323356326|gb|EGA88128.1| Ccr4p [Saccharomyces cerevisiae VL3] Length = 837 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 39/327 (11%), Positives = 84/327 (25%), Gaps = 42/327 (12%) Query: 20 VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + ++S+N + + + L++ + D+D++ LQE+ S Sbjct: 501 AKRTFTVLSYNTLCQHYATPKMYRYTPSWALSWDYRRNKLKEQILSYDSDLLCLQEVESK 560 Query: 78 NAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 P + ++ R +DS I ++ +++ + Sbjct: 561 TFEEYWVPLLDKHGYTGIFHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDFSG 620 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-----DSLENTYSPSCSLLSQQA 188 + R L +N + + + + + + Q Sbjct: 621 AWMKHKKFQRTEDYLNRAMNKDNVALFLKLQHIPSGDTIWAVTTHLHWDPKFNDVKTFQV 680 Query: 189 QWLKDWITQKKESLV-----------PFVIAGDFNRKINYLGNNDDF------------- 224 L D + + P +I GDFN IN Sbjct: 681 GVLLDHLETLLKEETSHNFRQDIKKFPVLICGDFNSYINSAVYELIXTGRVQIHQEGNGR 740 Query: 225 -WKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277 + + + + C N IDY + Sbjct: 741 DFGYMSEKNFSHNLALKSSYNCIGELPFTNFTPSFTDVIDYIWFSTHALRVRGLLGEVDP 800 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ K SDH P+ ++F Sbjct: 801 EYVSKFIGFPNDKFPSDHIPLLARFEF 827 >gi|163750216|ref|ZP_02157458.1| exodeoxyribonuclease III [Shewanella benthica KT99] gi|161330072|gb|EDQ01056.1| exodeoxyribonuclease III [Shewanella benthica KT99] Length = 268 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 87/310 (28%), Gaps = 72/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN + L+ DI+ LQE +++ V Sbjct: 1 MKIVSFNING----------------IRARLHQLQALIDAHQPDIIGLQETKAHDDV--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K V Q G A R Sbjct: 42 -------FPAADVEAMGYKVHYHGGKAHYGVAMLSKLEPVKVQK----GFPTDSEDAQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+ + VL+ F ++ Q + L ++ + Sbjct: 91 MIIATFTQENGRPLTVLN-----GYFPQGDNVSHETKYPAKRQFYKDLMTYLNENHTPDE 145 Query: 204 PFVIAGDFNRKINYLG---------------------NNDDFWKTIDPNDSLIRFPKEKD 242 I GD N L ++ KT+ L F + Sbjct: 146 DIAIIGDINISPVDLDIGIGEPNAKRWLRTGKCSFQVEEREWLKTLMDWGLLDTFRELHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 R + ID + ++ + L++ + D ++ S Sbjct: 206 QRTERYSWFDYRSKGFVDNRGLRIDVVLATKSLNERLVES-------DVDYDLRAIEKPS 258 Query: 294 DHCPISIDYD 303 DH PI + Sbjct: 259 DHAPIWSSFS 268 >gi|110803483|ref|YP_698449.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens SM101] gi|110683984|gb|ABG87354.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens SM101] Length = 262 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 43/291 (14%), Positives = 92/291 (31%), Gaps = 45/291 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+ + + + W + + + K+ DI+ +QE + Sbjct: 4 LKVMTFNLKYDFKAQDNNEW-------SQRCLRITKLIKDHLPDIIGIQEGLIHMLDDMD 56 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAKDSF 137 + + + + D AI K VL+ P + F Sbjct: 57 DLLDEYS-------WVGEDGEGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDF 109 Query: 138 SRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + + R +L + +I+G KI + + HL E ++ ++ + Sbjct: 110 NSSLPRICTKLKLKDKISGLKIDIYNTHL-----DHESELAREEGIKIILKEVK------ 158 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP--KEKDSRCNANKNLRN 253 + P++I GDFN + N + + + + K Sbjct: 159 KNYEIYKTPYIIMGDFNCYLEDNLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY 218 Query: 254 KIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY + + N DD K SDH P+ + + Sbjct: 219 DGRIIDYILYSKE---------CEIKSLNIDDRKINWGYPSDHYPVICELE 260 >gi|77461149|ref|YP_350656.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens Pf0-1] gi|77385152|gb|ABA76665.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1] Length = 375 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 40/327 (12%), Positives = 91/327 (27%), Gaps = 68/327 (20%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS--------DYTLLRQYAKNLDADIVFLQ 72 Q +++++WN+ L+ + V + + + + ++ D+V LQ Sbjct: 67 GQALKVMTWNVQYLAGKRYVFWNDLAQGDDEAPTPEDMAFSLDEVARVIRDEQPDVVLLQ 126 Query: 73 EMGS--------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 E+ + ++P + + + + + + A R Sbjct: 127 ELDDGAKASDYQNQLKLLQERLTDLYPCSAHAFDWKADFVPDP-HIFGSVGRQLATLSRY 185 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENT 176 + + P+ A + + A+ +G ++ V + HL D Sbjct: 186 RIEHAERLQLPVQPANFISRQFQPKDALLATTLPLSDGGQLVVFNTHLDRATQPDD---- 241 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------------- 215 L Q + + + + P++I GDFN Sbjct: 242 ------TLQAQVTAVAKVLDKHESHGTPWLIGGDFNLLPLGQYRRLPTEQRTPYSADSAL 295 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + L + T + + R + N +DY Sbjct: 296 HVLWDKYPMIPTNNEASGIDRAKWLTHYPNDPGLN-GPDRTVDYLFYSP----------- 343 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 + R+SDH P+ + Sbjct: 344 KIKRVEATVRQDDTLRISDHLPVIAKF 370 >gi|269963240|ref|ZP_06177574.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832045|gb|EEZ86170.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 317 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 93/309 (30%), Gaps = 30/309 (9%) Query: 24 VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + + N+ G S + + L+ DI+ LQE+ S Sbjct: 7 ITFATANLFNFVAPPGAYYDFENIYSRDDWQDKLAWTKSQFEQLNPDIIGLQEVFSIEET 66 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137 F + + F + + A+A R ++ L D Sbjct: 67 KTFFAEMGYEHFACV-DTPHIEGDYICSRPVVAVASRFPIESFEAVTFDKDTLNAFGDID 125 Query: 138 SRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLD-------SLENTYSPSCSLLSQQAQ 189 + +R+ V +V + V HLKS D S S +A Sbjct: 126 APPFSRKPVRACVVHPIIGHLSVYVTHLKSQRPADSTTPEEASRPIARWLSTQQRGWEAA 185 Query: 190 WLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--------NDSLIRFPKE 240 L+D + Q + +P V+ GD N+ I N+ + + ++ Sbjct: 186 MLRDVMQRQYALNSMPTVLMGDMNQGITSTSVNNVLTEHYGDSVTDLQLNDGWELQVTPS 245 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI------KSRGKRLSD 294 +SR + + +DY ++ Q Y D R K SD Sbjct: 246 LESRPATHYHFAKGNVLDYILLSQEFDAHADVSIAEVTNYQVLDAHLINPSFERDKNASD 305 Query: 295 HCPISIDYD 303 H +++ + Sbjct: 306 HAFVALTVE 314 >gi|170725165|ref|YP_001759191.1| endonuclease/exonuclease/phosphatase [Shewanella woodyi ATCC 51908] gi|169810512|gb|ACA85096.1| Endonuclease/exonuclease/phosphatase [Shewanella woodyi ATCC 51908] Length = 355 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 42/339 (12%), Positives = 94/339 (27%), Gaps = 60/339 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +++ ++N+ E + ++ + Y D++ QE+ S +A+ Sbjct: 15 IKVATFNLFNFIEPPSAYYDFENIYTQEQWQKKLAWITSYLNEHQPDVIGFQEVFSPDAL 74 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV---RVLQQSYPLLGAKDSF 137 A + +++ + + AIA R + V S Sbjct: 75 ATLTQACGLD-YFAVLDEPDVFDDFIYSKPVVAIASRYPIIDVHSVEADSQLAEMVGMPA 133 Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCF---LDSLENTYSPSCSLLSQQA---QW 190 + + +R+ + V I +H KS + + L + Q + Sbjct: 134 NFSFSRKPLRATVSIPKLGPCDCYVVHFKSKRPLFDAQTEYLSGKSQVKLKTGQLLAVEA 193 Query: 191 LKDW-----------------ITQKKESLVPFVIAGDFNRKI------------NYLGNN 221 L W + ++ ++ P ++ GDFN + + + Sbjct: 194 LAQWGASIVRGSEAALLRHAMVERRVQTQYPMMLMGDFNDGLEGGVLASLTSVDTRIKPD 253 Query: 222 DDFWKTIDPNDSLIR-----------FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 + F + + R L +DY ++ Sbjct: 254 NVFGDVTEELQEYQLQDSYELYQKSQYSLSSQQRPATYYYLAAGSVLDYILLSCEFDAKH 313 Query: 271 IQESFSEILYNEDDI------KSRGKRLSDHCPISIDYD 303 + Y D R + +DH P+ I Sbjct: 314 SRSLAEVGRYETYDRHLINPSFDRDSQSTDHAPVMITLS 352 >gi|157371595|ref|YP_001479584.1| endonuclease/exonuclease/phosphatase [Serratia proteamaculans 568] gi|157323359|gb|ABV42456.1| Endonuclease/exonuclease/phosphatase [Serratia proteamaculans 568] Length = 298 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 89/290 (30%), Gaps = 47/290 (16%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + A K+R+ S+NI SD T + + K ++AD+V LQE+ Sbjct: 49 TYSLEQAPKIRVASFNI---------------AAGKVSDMTAIAKAIKAMNADVVALQEV 93 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + + + +A K + YPL + Sbjct: 94 DKLTGRSGKLDQAEELAKLTGM-HVVFGRAIDYDGGEYGLAFLSKYPLHDSKIYPLPSGQ 152 Query: 135 DSFSRAGNRRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 R A ++ I +++ HL ++ Q + L Sbjct: 153 R-----EQRIAFSAQTDVPEFPAPITLINTHL-----------DTKEDPAMRLDQVRELN 196 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 D + + ++ GD N W + + I + Sbjct: 197 DRTIEMRGIK---LLFGDMNDVPGS-----VTWTELSRYWNDIMP---AAQDGRSWPAEN 245 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +I +DY NA ++ +S + + D +SDH P+ + Sbjct: 246 AEIKVDYIF-SGNAQRW-HLDSLTVPNASGDWNGIHWPAVSDHLPVVAEL 293 >gi|120597770|ref|YP_962344.1| endonuclease/exonuclease/phosphatase [Shewanella sp. W3-18-1] gi|120557863|gb|ABM23790.1| Endonuclease/exonuclease/phosphatase [Shewanella sp. W3-18-1] Length = 876 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 46/378 (12%), Positives = 101/378 (26%), Gaps = 88/378 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQ----EGVSLWKNSVKRTTS----DYTLLRQYAKNLDA 66 + + +R+ S+N+ + N T T + ++A Sbjct: 455 APSVATKGDIRVASFNVLNFFNDVVGGDTNPSGSNRGALTEEEMLLQRTKIVSAITAMNA 514 Query: 67 DIVFLQEMGSY-----NAVAKVFP--------KNTWCIFYSTERLINHSKRDSNNDIHTA 113 DIV L E+ + +A+ + N + + K ++ I Sbjct: 515 DIVGLMEIANNGFGEKSALKNLVDALNEKQTADNAYSFIELADADKYDGKYFGSDAITVG 574 Query: 114 IAVRKKNVRVL------------------QQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155 + R V + ++ + + A R ++ +I+ + Sbjct: 575 MLYRAGKVTLEGAARVIETPEQHATAGSVTRTKADKTETNPGNDAYQRHSLAQTFKIHNE 634 Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES--- 201 + V+ HLKS + + A+ L + + K Sbjct: 635 PLTVVVNHLKSKGSGCLEDWVNFEESVDPADQQGKCNAFRVSAAKVLGEALKDVKGDLLV 694 Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTI-------------DPNDSLIRFPK 239 P + DF+ + W T+ + + Sbjct: 695 IGDMNAYGMEDPIRVLTDFDASKSERDIVTASWTTLGGKVYERQGSKIDKGYGLINLNTQ 754 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291 + +D+ + + + K L+ I E ++ GK+ Sbjct: 755 AHGVATYSYSYNGELGNLDHALANTSLAKRLVDIEDWHINSVESNLFEYGKKYSGNLAKS 814 Query: 292 -----LSDHCPISIDYDF 304 SDH P+ I + Sbjct: 815 ENAFSASDHDPVIIALSY 832 >gi|146294097|ref|YP_001184521.1| endonuclease/exonuclease/phosphatase [Shewanella putrefaciens CN-32] gi|145565787|gb|ABP76722.1| Endonuclease/exonuclease/phosphatase [Shewanella putrefaciens CN-32] Length = 876 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 46/378 (12%), Positives = 101/378 (26%), Gaps = 88/378 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQ----EGVSLWKNSVKRTTS----DYTLLRQYAKNLDA 66 + + +R+ S+N+ + N T T + ++A Sbjct: 455 APSVATKGDIRVASFNVLNFFNDVVGGDTNPSGSNRGALTEEEMLLQRTKIVSAITAMNA 514 Query: 67 DIVFLQEMGSY-----NAVAKVFP--------KNTWCIFYSTERLINHSKRDSNNDIHTA 113 DIV L E+ + +A+ + N + + K ++ I Sbjct: 515 DIVGLMEIANNGFGEKSALKNLVDALNEKQTADNAYSFIELADADKYDGKYFGSDAITVG 574 Query: 114 IAVRKKNVRVL------------------QQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155 + R V + ++ + + A R ++ +I+ + Sbjct: 575 MLYRAGKVTLEGAARVIETPEQHATAGSVTRTKADKTETNPGNDAYQRHSLAQTFKIHNE 634 Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES--- 201 + V+ HLKS + + A+ L + + K Sbjct: 635 PLTVVVNHLKSKGSGCLEDWVNFEESVDPADQQGKCNAFRVSAAKVLGEALKDVKGDLLV 694 Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTI-------------DPNDSLIRFPK 239 P + DF+ + W T+ + + Sbjct: 695 IGDMNAYGMEDPIRVLTDFDASKSERDIVTASWTTLGGKVYERQGSKIDKGYGLINLNTQ 754 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291 + +D+ + + + K L+ I E ++ GK+ Sbjct: 755 AHGVATYSYSYNGELGNLDHALANTSLAKRLVDIEDWHINSVESNLFEYGKKYSGNLAKS 814 Query: 292 -----LSDHCPISIDYDF 304 SDH P+ I + Sbjct: 815 ENAFSASDHDPVIIALSY 832 >gi|319790707|ref|YP_004152347.1| endonuclease/exonuclease/phosphatase [Variovorax paradoxus EPS] gi|315593170|gb|ADU34236.1| Endonuclease/exonuclease/phosphatase [Variovorax paradoxus EPS] Length = 262 Score = 95.8 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 85/294 (28%), Gaps = 48/294 (16%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 A +++++ N + LR + + AD+VFLQE+ Sbjct: 10 AAAPAPTSLKVMTVNTHKGFTALNRKF----------ILPELRDAVRTVGADVVFLQEVL 59 Query: 76 SYNAV--AKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 ++ KV + + + + H AV K V +++ Sbjct: 60 GTHSRHSRKVSNWPDAPHYEFLADTMWPQFAYGRNAVYPKGHHGNAVLSKFPIVHFRNHD 119 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + + R + ++ + G+ + V I + + QQ + Sbjct: 120 VSVSG-----PEKRGLLHCVLRLPGRTVDVHVICAHLGL-----------AEAHRQQQLE 163 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L + + + P ++AGDFN + + F Sbjct: 164 LLCHIVRDEVPADAPLIVAGDFNDWRGRAHEVLEKGADLRE-----VFVHANGRAARTFP 218 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +P+D + + + LSDH P+ D D Sbjct: 219 SRFPLLPLDRIYVRNAG-----------VHAPVVLPRRPWSHLSDHAPLVADID 261 >gi|294852226|ref|ZP_06792899.1| exodeoxyribonuclease III [Brucella sp. NVSL 07-0026] gi|294820815|gb|EFG37814.1| exodeoxyribonuclease III [Brucella sp. NVSL 07-0026] Length = 260 Score = 95.8 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 86/302 (28%), Gaps = 67/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + L+ + + DIV LQE+ S + Sbjct: 1 MKIATWNING----------------VKARIDNLQHWLRESSPDIVCLQEIKSVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ K D +R Sbjct: 41 ------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLPGDDSDEQARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + + + V+ ++L + +D+ + Y S Q L++W ++ Sbjct: 92 --IEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQRLENWAKKRLTLEE 143 Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIRFPKEKDSRCNANK 249 P V+AGD+N + N + Sbjct: 144 PLVLAGDYNVIPEPVGARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRASTDESGVYS 203 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A I + + + ++ SDH P+++ Sbjct: 204 FWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------RAWEKPSDHVPVTV 256 Query: 301 DY 302 Sbjct: 257 TL 258 >gi|23501759|ref|NP_697886.1| exodeoxyribonuclease III [Brucella suis 1330] gi|161618833|ref|YP_001592720.1| exodeoxyribonuclease III (xth) [Brucella canis ATCC 23365] gi|225627361|ref|ZP_03785398.1| exodeoxyribonuclease III Xth [Brucella ceti str. Cudo] gi|225852385|ref|YP_002732618.1| exodeoxyribonuclease III Xth [Brucella melitensis ATCC 23457] gi|254701637|ref|ZP_05163465.1| exodeoxyribonuclease III Xth [Brucella suis bv. 5 str. 513] gi|254704180|ref|ZP_05166008.1| exodeoxyribonuclease III Xth [Brucella suis bv. 3 str. 686] gi|254706917|ref|ZP_05168745.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M163/99/10] gi|254709975|ref|ZP_05171786.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis B2/94] gi|254713975|ref|ZP_05175786.1| exodeoxyribonuclease III Xth [Brucella ceti M644/93/1] gi|256031468|ref|ZP_05445082.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M292/94/1] gi|256044546|ref|ZP_05447450.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 1 str. Rev.1] gi|256060978|ref|ZP_05451136.1| exodeoxyribonuclease III Xth [Brucella neotomae 5K33] gi|256113411|ref|ZP_05454260.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 3 str. Ether] gi|256159594|ref|ZP_05457356.1| exodeoxyribonuclease III Xth [Brucella ceti M490/95/1] gi|256254874|ref|ZP_05460410.1| exodeoxyribonuclease III Xth [Brucella ceti B1/94] gi|256264117|ref|ZP_05466649.1| exodeoxyribonuclease III [Brucella melitensis bv. 2 str. 63/9] gi|256369301|ref|YP_003106809.1| exodeoxyribonuclease III [Brucella microti CCM 4915] gi|260168602|ref|ZP_05755413.1| exodeoxyribonuclease III [Brucella sp. F5/99] gi|261222058|ref|ZP_05936339.1| exodeoxyribonuclease III Xth [Brucella ceti B1/94] gi|261314381|ref|ZP_05953578.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M163/99/10] gi|261317523|ref|ZP_05956720.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis B2/94] gi|261321730|ref|ZP_05960927.1| exodeoxyribonuclease III Xth [Brucella ceti M644/93/1] gi|261324980|ref|ZP_05964177.1| exodeoxyribonuclease III Xth [Brucella neotomae 5K33] gi|261752190|ref|ZP_05995899.1| exodeoxyribonuclease III Xth [Brucella suis bv. 5 str. 513] gi|261754849|ref|ZP_05998558.1| exodeoxyribonuclease III Xth [Brucella suis bv. 3 str. 686] gi|265988558|ref|ZP_06101115.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M292/94/1] gi|265990972|ref|ZP_06103529.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 1 str. Rev.1] gi|265994809|ref|ZP_06107366.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 3 str. Ether] gi|265998023|ref|ZP_06110580.1| exodeoxyribonuclease III Xth [Brucella ceti M490/95/1] gi|23347687|gb|AAN29801.1| exodeoxyribonuclease III [Brucella suis 1330] gi|161335644|gb|ABX61949.1| exodeoxyribonuclease III (xth) [Brucella canis ATCC 23365] gi|225617366|gb|EEH14411.1| exodeoxyribonuclease III Xth [Brucella ceti str. Cudo] gi|225640750|gb|ACO00664.1| exodeoxyribonuclease III Xth [Brucella melitensis ATCC 23457] gi|255999461|gb|ACU47860.1| exodeoxyribonuclease III [Brucella microti CCM 4915] gi|260920642|gb|EEX87295.1| exodeoxyribonuclease III Xth [Brucella ceti B1/94] gi|261294420|gb|EEX97916.1| exodeoxyribonuclease III Xth [Brucella ceti M644/93/1] gi|261296746|gb|EEY00243.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis B2/94] gi|261300960|gb|EEY04457.1| exodeoxyribonuclease III Xth [Brucella neotomae 5K33] gi|261303407|gb|EEY06904.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M163/99/10] gi|261741943|gb|EEY29869.1| exodeoxyribonuclease III Xth [Brucella suis bv. 5 str. 513] gi|261744602|gb|EEY32528.1| exodeoxyribonuclease III Xth [Brucella suis bv. 3 str. 686] gi|262552491|gb|EEZ08481.1| exodeoxyribonuclease III Xth [Brucella ceti M490/95/1] gi|262765922|gb|EEZ11711.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 3 str. Ether] gi|263001756|gb|EEZ14331.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 1 str. Rev.1] gi|263094335|gb|EEZ18180.1| exodeoxyribonuclease III [Brucella melitensis bv. 2 str. 63/9] gi|264660755|gb|EEZ31016.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M292/94/1] gi|326408891|gb|ADZ65956.1| exodeoxyribonuclease III Xth [Brucella melitensis M28] Length = 260 Score = 95.8 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 87/302 (28%), Gaps = 67/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + L+ + + DIV LQE+ S + Sbjct: 1 MKIATWNING----------------VKARIDNLQHWLRESSPDIVCLQEIKSVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ K D +R Sbjct: 41 ------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLPGDDSDEQARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + + + V+ ++L + +D+ + Y S Q L++W ++ Sbjct: 92 --IEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQRLENWAKKRLTLEE 143 Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIRFPKEKDSRCNANK 249 P V+AGD+N + + N + Sbjct: 144 PLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRASTDESGVYS 203 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A I + + + ++ SDH P+++ Sbjct: 204 FWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------RAWEKPSDHVPVTV 256 Query: 301 DY 302 Sbjct: 257 TL 258 >gi|7592805|dbj|BAA94392.1| orf0 [Actinobacillus actinomycetemcomitans] Length = 264 Score = 95.8 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 36/306 (11%), Positives = 85/306 (27%), Gaps = 73/306 (23%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 +S+NIN L + L + D++ LQE+ +VFP Sbjct: 1 MSFNINGL----------------RARPHQLEEIINKYQPDVLGLQEI---KVSDEVFPY 41 Query: 87 NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146 + + + H +A+ K + + +++ R + Sbjct: 42 DL-------VDHLGYHVNHFGQKGHYGVALLSKQAPLSVRKGFPTDDEEAQKR-----II 89 Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206 + +E ++ V++ F + + L+ ++ Q + P + Sbjct: 90 MIDLETKFGQLTVIN-----GYFPQGESREHPTKFPAKQKFYADLQRYLEQDHNAQNPVI 144 Query: 207 IAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 I GD N + L ++++ + F + Sbjct: 145 IMGDMNISPSDLDIGIGEENRKRWLRTGKCSFLPEEREWYQRLYAYGLEDTFRHMNPTVN 204 Query: 246 NANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + ID+ + ++ + + SDH Sbjct: 205 DKFSWFDYRSKGFDDNRGLRIDHILANKALVAHCVDTGI-------ALDIRAMNKPSDHA 257 Query: 297 PISIDY 302 PI ++ Sbjct: 258 PIWAEF 263 >gi|294789096|ref|ZP_06754335.1| endonuclease/exonuclease/phosphatase family protein [Simonsiella muelleri ATCC 29453] gi|294482837|gb|EFG30525.1| endonuclease/exonuclease/phosphatase family protein [Simonsiella muelleri ATCC 29453] Length = 238 Score = 95.8 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 82/288 (28%), Gaps = 58/288 (20%) Query: 24 VRLVSWNIN-------TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R++S+NI S + L T+ + QY D D+V LQE+ Sbjct: 1 MRILSYNIQAAIASDSYFSYLSRLHLQIMPSPTKTTVLQNIAQYIS--DFDVVCLQEVDL 58 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + ++ R + K + PL Sbjct: 59 GGFRNGYKNQVEQFLAHTPFEYYACQINRVVGKLSVHGNLILSKIPLQQVVNTPLPS--- 115 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R R + + VE+ ++ V + HL Q + ++ +I Sbjct: 116 ---RIKGRGMLAVAVEMPFGQMVVANAHLSLGMLD----------------QLKQIR-FI 155 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + + + GDFN +N + + D + + + K Sbjct: 156 RETLKPYDNVCLMGDFNC-----PSNAEQLHLLKDFDYIHL-----NDNTATYPSWHPKQ 205 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D+ + F SDH P+ ++ + Sbjct: 206 TLDHIFIKGCLKGRAEVAQFC---------------ASDHLPVILEIE 238 >gi|170703616|ref|ZP_02894358.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria IOP40-10] gi|170131473|gb|EDT00059.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria IOP40-10] Length = 286 Score = 95.8 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 37/308 (12%), Positives = 82/308 (26%), Gaps = 52/308 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 +RL+ WN+ + +GV D A+ L D D++ LQE+ Sbjct: 1 MRLIDWNVQWGRDADGV-----------VDLARTIAAARRLGDFDVLCLQEVTRGFGVLP 49 Query: 75 --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + ++ + + + A+ + L Sbjct: 50 GQPGPDQFTELAALLPGYMIFEAIGADLPPLEPGASRRQFGNAIATRLPAGRVLRQLLPW 109 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 D+ + R A+++ + + ++ HL+ + + ++A Sbjct: 110 PADAGGPSMPRVALDVELTTPSGGLRIVTTHLEYYSARQ--RLAQVDALRARHREACAHA 167 Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 D + + PF +I GDFN D + + Sbjct: 168 DQPAPAENATGPFTATGQARDSIICGDFNSAFGSDAYQRLLEPIADAPSFVDAWVARHPG 227 Query: 244 RCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + D+ + + + R SDH Sbjct: 228 HTPPPTAGVYDTVQWSEGPLACDFVFVTDTLLPRVTRCEI-----------DGDVRASDH 276 Query: 296 CPISIDYD 303 P+ ++ + Sbjct: 277 QPVVLELE 284 >gi|116072855|ref|ZP_01470120.1| Exodeoxyribonuclease III xth [Synechococcus sp. BL107] gi|116064381|gb|EAU70142.1| Exodeoxyribonuclease III xth [Synechococcus sp. BL107] Length = 282 Score = 95.8 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 39/306 (12%), Positives = 92/306 (30%), Gaps = 67/306 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ +WN+N S + + + D++ LQE + + Sbjct: 1 MRIATWNVN----------------SVRSRLDQVLSWLEQAQPDLLCLQETKVDDPLFPS 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K F W + + + +A+ + + Y +G + A Sbjct: 45 KAFEAKGWRVNFH------------GQKSYNGVALVSRAP-LDDVRYGFVGELEKDPEAL 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + ++ + V+++++ + L S + Y + LK ++ + Sbjct: 92 DLGEQKRVISALIDGVRVVNLYVPNGSSLTSDKYPYK------LTWLKCLKRYLEHPLKR 145 Query: 202 LVPFVIAGDFNRKINYLGNN------------DDFWKTI--DPNDSLIRFPKEKDSRCNA 247 P + GDFN + + D + + + L + + Sbjct: 146 GEPLCVVGDFNIALEARDMHAPDRLSGGIMASDAERQALQMALANGLQDVFRVFEPDAGH 205 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ + + + D + SDH P+ Sbjct: 206 WSWWDYRSGAWDRDRGWRIDHIYLCDELLGLARSCVIHKSVRGND-------KPSDHAPV 258 Query: 299 SIDYDF 304 S+D D+ Sbjct: 259 SVDLDW 264 >gi|88860944|ref|ZP_01135580.1| hypothetical protein PTD2_10358 [Pseudoalteromonas tunicata D2] gi|88817157|gb|EAR26976.1| hypothetical protein PTD2_10358 [Pseudoalteromonas tunicata D2] Length = 877 Score = 95.8 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 88/321 (27%), Gaps = 49/321 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWK------NSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ +G +S+ + LDAD++ L EM Sbjct: 457 GDLRIASFNVLNYFNGDGQGAGFPTSRGADSLAEFERQRDKIITAILALDADVIGLMEME 516 Query: 76 S-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYP 129 + +AV + + ++ + D +A+ R V + Q+ Sbjct: 517 NDGFGPQSAVQDLVNGLNAVAGENQFAFVDFNAEQVGTDQIMSAMIYRTNRVEQVGQAAF 576 Query: 130 LLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHL-------KSFCFLDSLENTYSPS 180 + R + + + + V+ HL K+ + Sbjct: 577 TTAEPFDYGN---RPPMMQSFKDLSHDEVFSVVVAHLRSKGSCSKATDGDVDSGDGQGCW 633 Query: 181 CSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + L WI + VI GD N T + N + Sbjct: 634 NATRVNAVNQLTQWIATTPTNVADSDVVILGDMNAYAMEDPI-----TTYEANGFINLKK 688 Query: 239 KEKDSRC-NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------- 289 + + +D+ + + + + I +E I Sbjct: 689 AIHGNTYDYSYIYQGLMGSLDHALASSTMAEKVTGITDWHINADEPIILDYNLEYKTEQQ 748 Query: 290 ---------KRLSDHCPISID 301 R SDH PI I+ Sbjct: 749 KTSLYASNAYRASDHDPIIIE 769 >gi|260768888|ref|ZP_05877822.1| exodeoxyribonuclease III [Vibrio furnissii CIP 102972] gi|260616918|gb|EEX42103.1| exodeoxyribonuclease III [Vibrio furnissii CIP 102972] gi|315180582|gb|ADT87496.1| exodeoxyribonuclease III [Vibrio furnissii NCTC 11218] Length = 269 Score = 95.8 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 36/310 (11%), Positives = 80/310 (25%), Gaps = 72/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQAVIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K + + G R Sbjct: 42 -------FPLEDVEAMGYKVYFHGQKAHYGVAMLCKQTPLEVRK----GFPTDNDDHQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + G+K+ V++ F ++ Q L ++ Sbjct: 91 MIMATFLNEQGQKVTVMN-----GYFPQGDNISHETKFPYKRQFYADLMTYLNDYHTKDD 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ + KT+ F K Sbjct: 146 QLIVMGDINISPIDLDIGIGEPNRQRWLKTGKCSFQPEERQWLKTLLDWGFEDTFRKLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + + ID + + ++ D ++ S Sbjct: 206 AVNDQFSWFDYRSKGFDDNRGLRIDVILATPSLAATCVEAGI-------DYELRGIEKPS 258 Query: 294 DHCPISIDYD 303 DH PI + Sbjct: 259 DHAPIWSVFS 268 >gi|163739595|ref|ZP_02147004.1| exodeoxyribonuclease III [Phaeobacter gallaeciensis BS107] gi|161387054|gb|EDQ11414.1| exodeoxyribonuclease III [Phaeobacter gallaeciensis BS107] Length = 268 Score = 95.8 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 89/306 (29%), Gaps = 65/306 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + L ++ D+V LQE+ S V + Sbjct: 1 MKIATFNING----------------IKARINALPEWLDEAQPDVVVLQEIKS---VDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + ++ +A+ K + D +R Sbjct: 42 FPRELF-------EDRGYNVETHGQKSFNGVAILSKLPLEDVRRGLPGDDSDEQARW--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCF---LDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +E V + + I + ++L + + + + L+ Sbjct: 92 --IEATV-VGKQAIRICGLYLPNGNPVELDAEGQPVEGGKYAYKLAWMERLRQRAKDLLA 148 Query: 201 SLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 +P ++AGD+N + + ++ I F Sbjct: 149 EEMPALMAGDYNIIPQAEDAKTPEAWKDDALHRPESRAAFQRIMALGFTEAFRARHQGPG 208 Query: 246 NANKNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + N I ID+F++ A L D + SDH P Sbjct: 209 HYSFWDYQAGAWNRNNGIRIDHFLLSPQAADLLRDCQI-------DKDVRGRDKPSDHVP 261 Query: 298 ISIDYD 303 + +D D Sbjct: 262 VWVDLD 267 >gi|83591541|ref|YP_425293.1| endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC 11170] gi|83574455|gb|ABC21006.1| Endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC 11170] Length = 264 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 90/304 (29%), Gaps = 60/304 (19%) Query: 13 LVPCTASVAQ------KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 LVP + S ++ +R+V WN++ + D + + + L Sbjct: 9 LVPHSTSTSEGFAGSIALRVVCWNLHGCVGTDR-----------RRDPSRVAKALAVLSP 57 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D+V LQE+ + T I +T HS + A+ + V Sbjct: 58 DVVGLQEVDLRRHPGEAEDPLT-LIARATGMRAVHSPTLKRDGGAYGNAILSRWPVVAAL 116 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 L RRA++ +E + V+ HL Sbjct: 117 PLDLSVPGC-----EPRRAMDATLEHPAGPLRVMVTHLGLG-------------RKERRW 158 Query: 187 QAQWLKDWITQKK------ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 Q L + +++ ++ P ++ GDFN + + + Sbjct: 159 QVGRLGERLSRPLAGADGRDAHHPLILMGDFNEWL---PWGQTAVAGLKTWFDADCSRR- 214 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + +D ++ + + +R SDH P+ + Sbjct: 215 ------TFPSWLPILRLDRLLVRPSPR--------RLTPWPTLPQGQGIRRASDHLPLVV 260 Query: 301 DYDF 304 D +F Sbjct: 261 DLEF 264 >gi|253997905|ref|YP_003049968.1| exodeoxyribonuclease III Xth [Methylovorus sp. SIP3-4] gi|253984584|gb|ACT49441.1| exodeoxyribonuclease III Xth [Methylovorus sp. SIP3-4] Length = 255 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 84/303 (27%), Gaps = 72/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N+L+ + + D++ LQE ++ Sbjct: 1 MKLATWNVNSLN----------------VRLPHVLDWCTANQPDVLCLQETKQEDS---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y I ++ S + +A+ ++V + Sbjct: 41 ------KFPYEALTAIGYNAIHSGQKTYNGVAILSRHVLE------HPSYGIPDFADEQK 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V K I ++ ++ + +DS + Y L + + + Sbjct: 89 RLIAATV----KGIRIVCAYIPNGQSVDSDKYQYK------LNWLASLTTHLQAELAAHP 138 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249 + GD+N +D + + L + + + Sbjct: 139 KLALLGDYNIAPEDRDVHDPAAWLGQVLVSEPERTAFQGLVGLGLHDTFRLFEQPEASFS 198 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ D + +R SDH P+ + Sbjct: 199 WWDYRMAGFRRNLGLRIDHILVSTPLLAACKASWI-------DKAPRKLERPSDHTPVVL 251 Query: 301 DYD 303 + Sbjct: 252 ELS 254 >gi|210634817|ref|ZP_03298323.1| hypothetical protein COLSTE_02250 [Collinsella stercoris DSM 13279] gi|210158621|gb|EEA89592.1| hypothetical protein COLSTE_02250 [Collinsella stercoris DSM 13279] Length = 280 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 85/314 (27%), Gaps = 65/314 (20%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 T + ++ ++L SWN+N L LDADI+ LQE Sbjct: 2 TNTASRTLKLASWNVNGLRAVLKKDPSF-------------TDIVSELDADILGLQETKL 48 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 ++ + +S +S ++ + +L A + Sbjct: 49 QEGQVEI-DLPGYHQVWSYAERKGYSGTAVFTR---------DEPLSVRHADAVLAAGRA 98 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS---PSCSLLSQQAQWLKD 193 ++ + + G+ V + + F F+D + Sbjct: 99 AGLTDDQLELVAVAATEGR---VCALEFERFWFVDVYTPNAQGELARLDTRMAWDDAYRA 155 Query: 194 WITQKKES-LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRF 237 ++ ++ P V GDFN N + + F Sbjct: 156 FLLSLEDETGKPVVTCGDFNVAHNEIDLKNPKSNRGNAGFSDEERSKFVELLDAGYTDTF 215 Query: 238 PKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 A + IDYF++ + + ++ Sbjct: 216 RAANPDLEGAYSWWSYRFNARKNNAGWRIDYFLVSDSIADRVRATGIRSDIF-------- 267 Query: 289 GKRLSDHCPISIDY 302 SDHCP++++ Sbjct: 268 ---GSDHCPVTLEI 278 >gi|332141071|ref|YP_004426809.1| exodeoxyribonuclease III [Alteromonas macleodii str. 'Deep ecotype'] gi|327551093|gb|AEA97811.1| exodeoxyribonuclease III [Alteromonas macleodii str. 'Deep ecotype'] Length = 269 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 80/311 (25%), Gaps = 76/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++S+NIN + L+ DI+ LQE + + Sbjct: 1 MKVISFNING----------------IRARLHQLQAVIDAHQPDIIGLQEIKVHNEQFPV 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +++ H +A K + +G A Sbjct: 45 EAVEAMGYHVYFH------------GQKSHYGVAFLAKKEPLSVT----MGFPTDEEDAQ 88 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + G+ + +L+ F + + + L ++ + Sbjct: 89 RRMIILKTTDDAGQPVTILN-----GYFPQGENEKHETKYPAKRKFYKDLMTYLDENHTP 143 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 ++ GD N L ++ T+ F Sbjct: 144 EDNVIVMGDVNISHTDLDIGIGEENRKRWLRTGKCSFLPEEREWLNTLFSWGFEDSFRTL 203 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + ID + ++ + L+ D ++ Sbjct: 204 NPETNERFSWFDYRSKGFNDNRGLRIDLILATKSLHSTLVDAGI-------DYELRGIEK 256 Query: 292 LSDHCPISIDY 302 SDH PI +Y Sbjct: 257 PSDHAPIWAEY 267 >gi|255535973|ref|YP_003096344.1| hypothetical protein FIC_01839 [Flavobacteriaceae bacterium 3519-10] gi|255342169|gb|ACU08282.1| hypothetical protein FIC_01839 [Flavobacteriaceae bacterium 3519-10] Length = 314 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 34/315 (10%), Positives = 87/315 (27%), Gaps = 49/315 (15%) Query: 26 LVSWNINTLSEQEGVS---------LWKNSVKR-TTSDYTLLRQYAKNLD------ADIV 69 + +N+ L + +N +R + + + + ++ Sbjct: 10 IAFYNVENLLMPDPPPVHKTDPSASGLRNWDERKYRIKLSKIAHVFQLIADQEGVTPLLI 69 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ--- 126 L E+ + ++ + I H I A+ + ++++ Sbjct: 70 GLCEVQGREPLEELLALTPF-----PNHQIVHYGSSDLRGIDVALLYDRTKLQLISSQPL 124 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 S+ R + +G+ + V +HL S D + +L + Sbjct: 125 SFNFQTTDGESQPDPTRDILHCRFHCDGRNLNVFVLHLPSKREKDV-------NKALRTN 177 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + L +T+ + +I GDFN + + F + + Sbjct: 178 ILEQLHQVVTEYIANGEAVIICGDFNANPDEDTVKKLLYDKDFMKVLHNPFGELLSANKF 237 Query: 247 ANKNLRNKIPIDYFVMDQNAYK------------------FLIQESFSEILYNEDDIKSR 288 + + N + D ++ Y+ + + Sbjct: 238 STYHRANGLLFDQIILSDGFYRTGFPLKFKTAKIFSYEKLRVRDRKLAARPAKTFAGTRY 297 Query: 289 GKRLSDHCPISIDYD 303 SDH P+ +++ Sbjct: 298 LGGYSDHFPVITEFE 312 >gi|167856041|ref|ZP_02478785.1| exodeoxyribonuclease III [Haemophilus parasuis 29755] gi|219870568|ref|YP_002474943.1| exonuclease III [Haemophilus parasuis SH0165] gi|167852836|gb|EDS24106.1| exodeoxyribonuclease III [Haemophilus parasuis 29755] gi|219690772|gb|ACL31995.1| exonuclease III [Haemophilus parasuis SH0165] Length = 267 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 82/311 (26%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + D++ LQE + + Sbjct: 1 MKFISFNINGL----------------RARPHQLEALIEKHQPDVIGLQEIKVADEDFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +F+ H +A+ KN + + D+ R Sbjct: 45 DLVNHLGYHVFHH------------GQKGHYGVALLTKNQPLAVRKGFPTDNADAQKR-- 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +E + VL+ F ++ + L+ ++ + + Sbjct: 91 ---MIMADLETPFGTLTVLN-----GYFPQGENRSHETKFPAKEKFYADLQRYLETELKP 142 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 P VI GD N L ++ + + F Sbjct: 143 ENPIVIMGDMNISPTDLDIGLGEVNRKRWLRDGKCSFLPEEREWLGRLHGYGLVDTFRAM 202 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + ID + + ++ D + Sbjct: 203 NPTAEDKFSWFDYRSKGFDDNRGLRIDLVLASTPLAERCVETGI-------DLEIRAMDK 255 Query: 292 LSDHCPISIDY 302 SDH P+ + Sbjct: 256 PSDHAPVWAVF 266 >gi|259144689|emb|CAY77630.1| Ccr4p [Saccharomyces cerevisiae EC1118] Length = 841 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 40/327 (12%), Positives = 84/327 (25%), Gaps = 42/327 (12%) Query: 20 VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + ++S+N + + + L++ + D+D++ LQE+ S Sbjct: 505 AKRTFTVLSYNTLCQHYATPKMYRYTPSWALSWDYRRNKLKEQILSYDSDLLCLQEVESK 564 Query: 78 NAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 P + ++ R +DS I ++ +++ + Sbjct: 565 TFEEYWVPLLDKHGYTGIFHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDFSG 624 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-----DSLENTYSPSCSLLSQQA 188 + R L +N + + + + + + Q Sbjct: 625 AWMKHKKFQRTEDYLNRAMNKDNVALFLKLQHIPSGDTIWAVTTHLHWDPKFNDVKTFQV 684 Query: 189 QWLKDWITQKKESLV-----------PFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLI 235 L D + + P +I GDFN IN + I + Sbjct: 685 GVLLDHLETLLKEETSHNFRQDIKKFPVLICGDFNSYINSAVYELINTGRVQIHQEGNGR 744 Query: 236 RFPKEKDSRC-----------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277 F + N IDY + Sbjct: 745 DFGYMSEKNFSHNLALKSSYNCIGELPFTNFTPSFTDVIDYIWFSTHALRVRGLLGEVDP 804 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ K SDH P+ ++F Sbjct: 805 EYVSKFIGFPNDKFPSDHIPLLARFEF 831 >gi|297158932|gb|ADI08644.1| putative endonuclease/exonuclease/phosphatase family protein [Streptomyces bingchenggensis BCW-1] Length = 808 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 38/328 (11%), Positives = 85/328 (25%), Gaps = 68/328 (20%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +V + ++N+ L + S + + + DIV L+E+ N Sbjct: 502 ANQVSVATYNVENLDPTDPQSKFDRLAEGVVKNLAA---------PDIVSLEEIQDNNGA 552 Query: 81 A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 K T+ S + + + + +I + V Sbjct: 553 KDDGTVAADKTIAQFIDAIKAAGGPTYDW-RSVDPVNDADGGEPGGNIRNVFLFNPQRVS 611 Query: 123 VLQQSY----------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 + + P S + +R+ + G+K++V+ Sbjct: 612 FVDRPGGDATTAVEAVRDGNKGARLSVSPGRINPTSDAWKSSRKPLVGEFTFRGEKLFVV 671 Query: 161 DIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRK 214 H S + + P S + + QA+ + +++ V+ GD N Sbjct: 672 GNHFNSKGGDQPVHGAFQPPTLGSETQRTAQAKEVNTFVSGLLAKDRQARVVVLGDMNDF 731 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 + + N +D+ ++ Sbjct: 732 QFS----KPLATLTEGGVLTDLINTLPAGERYSYVYDGNAQTLDHILVSPTIK------- 780 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P + + Sbjct: 781 -KPEYDVVHINAEFSDQSSDHDPQVVRF 807 >gi|294633236|ref|ZP_06711795.1| secreted protein [Streptomyces sp. e14] gi|292831017|gb|EFF89367.1| secreted protein [Streptomyces sp. e14] Length = 299 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 41/291 (14%), Positives = 87/291 (29%), Gaps = 61/291 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--- 79 +R+ ++NI+ + ++ V D + ++L AD++ LQE+ + Sbjct: 52 PLRVATYNIHAGAGEDNVF-----------DLDRTARAIRDLHADVIGLQEVDVHWGDRS 100 Query: 80 -----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 ++ + +F++ + + + +AV + V +++ + Sbjct: 101 GFTDEARELARRLRMRVFFAPIYDLPPAAGHT-QRQRFGVAVLSRLPVVSAENHEITRLS 159 Query: 135 DSFSRAGNRRA---VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 A E+ V +G + V HL Y P S+ Q + Sbjct: 160 TQSPDPVPEPAPGFAEVTVRAHGTLVHVYSTHL-----------DYRPDPSVRRTQVDDM 208 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 + + + P V+ GDFN + + W + Sbjct: 209 LGVLAEDRG---PKVLVGDFNAEPDAPELTR-LWGPLADAVPEAGDTYPALDPVK----- 259 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID +A ++ SDH P+ D Sbjct: 260 ----RIDVIATSPDA--------------VVTRARTVDTAASDHRPVVADL 292 >gi|261210504|ref|ZP_05924797.1| exodeoxyribonuclease III [Vibrio sp. RC341] gi|260840289|gb|EEX66860.1| exodeoxyribonuclease III [Vibrio sp. RC341] Length = 268 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 83/311 (26%), Gaps = 76/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++S+NIN L + L+ D++ LQE + Sbjct: 1 MKIISFNINGL----------------RARLHQLQAIIDKHQPDVIGLQEIKVHDDAFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +++ H +A+ K + + G Sbjct: 45 EEVEAMGYQVYFH------------GQKAHYGVAILCKQTPLEV----IKGFPTDNEEHQ 88 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + G K VL+ F + Q + L ++ + + + Sbjct: 89 KRMIMATFADQEGNKTTVLN-----GYFPQGDNVEHETKFPYKRQFYRDLMTYLREHRSN 143 Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240 V+ GD N ++ ++ +T+ + F + Sbjct: 144 TERLVVMGDINISPIDLDIGIGEANRKRWLQTGKCSFQPEEREWLQTLLDWGLVDTFRQL 203 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + ID + + + + D + Sbjct: 204 HPNVNDQFSWFDYRSRGFEDNRGLRIDVILATPSLAETCQEAGI-------DYELRGIDK 256 Query: 292 LSDHCPISIDY 302 SDH PI + Sbjct: 257 PSDHAPIWATF 267 >gi|254460874|ref|ZP_05074290.1| exodeoxyribonuclease III [Rhodobacterales bacterium HTCC2083] gi|206677463|gb|EDZ41950.1| exodeoxyribonuclease III [Rhodobacteraceae bacterium HTCC2083] Length = 259 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 84/304 (27%), Gaps = 72/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +++ ++NIN + L ++ K+ D+ LQE+ Sbjct: 1 MKIATFNING----------------IKARIAALPEWLKDAQPDVALLQEIKSVDEGFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++F + + +A+ K + D +R Sbjct: 45 ELFEDMGYNV------------ETHGQKSFNGVAILSKLPLEDVRRGLPGDDSDEQARW- 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E V + + I V ++L + + Y + L+ Sbjct: 92 ----IEATV-VGKQAIRVCGLYLPNGNPAPGPKYDYKLA------WMARLQARAEALLAE 140 Query: 202 LVPFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 PF++AGD+N + ++ + F + Sbjct: 141 ETPFLMAGDYNIIPQDEDARHPEVWQEDALARPESRAAYRRLVNLGLTEAFRARVHGPEH 200 Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+F++ L+ D G++ SDH P+ Sbjct: 201 YSFWDYQAGAWNKDDGIRIDHFLLSPAVADILVDCQI-------DMHVRAGEKPSDHVPV 253 Query: 299 SIDY 302 ++ Sbjct: 254 WVEL 257 >gi|153005502|ref|YP_001379827.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5] gi|152029075|gb|ABS26843.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5] Length = 289 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 92/285 (32%), Gaps = 39/285 (13%) Query: 24 VRLVSWNINTLSEQEGVSLWKN------SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 +R+ +WN++ L + E L S + + + + +DAD+V LQE+ + Sbjct: 35 LRVATWNVHDLFDAEDRLLPPGAEDALPSPEAVKAKLDAVAEVLLRVDADVVLLQEVETL 94 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + + + + + I A+ R R + + L G + Sbjct: 95 ALASALAARAGY-------GEARLVEGNDPRGIDVAVLSRPSIHRYVSHAAELDGDGRTL 147 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R VE+ + + G++I ++ HL S D + A Sbjct: 148 W---PRDCVEVHLGVGGRRIAIVASHLSSRLSDDGTRRAAQAARMRAIADAI-------S 197 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 + + ++ GD N D P ++ + + Sbjct: 198 EADPEALVLVGGDLNDPPTAPALAPL------AGDGAHVDPLPSWETTWSSGSPA--ERL 249 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D ++ + + +++ + R SDH P+ +D Sbjct: 250 DALLVGRASAAAIVRAVVE--------RGTDVARASDHQPVVLDL 286 >gi|146277242|ref|YP_001167401.1| exodeoxyribonuclease III Xth [Rhodobacter sphaeroides ATCC 17025] gi|145555483|gb|ABP70096.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides ATCC 17025] Length = 259 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 39/302 (12%), Positives = 85/302 (28%), Gaps = 68/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + + + + D+V LQE+ S + Sbjct: 1 MKIATYNING----------------IKARIEAVLAWLEAASPDVVLLQEIKSVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +A+ + A+D +R Sbjct: 41 ------TFPRAVFEDRGWHLETHGQKGFNGVAILSRLPLEDVVRGLPGDAEDVQARW--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E V + + + V ++L + + Y + +Q + E+ Sbjct: 92 --IEATV-VGQRAVRVCGLYLPNGNPAPGPKYDYKLAWIARMKQRAA------ELLETED 142 Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGD+N + ++ I F + + Sbjct: 143 PVVLAGDYNVIPQAEDAARPEAWVTDALFLPESRAAFRRILNLGYTEAFRARSFGPGHYS 202 Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 N I ID+ ++ A + D G++ SDH P+ + Sbjct: 203 FWDYQAGAWEKNNGIRIDHLLLSPQAADLMTDV-------RIDREVRAGEKPSDHVPVWV 255 Query: 301 DY 302 + Sbjct: 256 EL 257 >gi|88705337|ref|ZP_01103048.1| protein containing Endonuclease/exonuclease/phos phatase domain [Congregibacter litoralis KT71] gi|88700427|gb|EAQ97535.1| protein containing Endonuclease/exonuclease/phos phatase domain [Congregibacter litoralis KT71] Length = 1037 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 44/325 (13%), Positives = 79/325 (24%), Gaps = 41/325 (12%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWK------------NSVKRTTSDYTLLRQYAK 62 +V +++ S+N+ + +S + Sbjct: 664 TAPEAVGGSLKVASFNVLNYFTTLDLGQDTCGPSKNLECRGADSADELARQQEKIVAALA 723 Query: 63 NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNV 121 +LDADIV L E+ + + V+ + S D I A V Sbjct: 724 DLDADIVGLIEIENTDGVSAEATLASALSAVSGRSYAAVQTGTVGTDAIKVAFIYDTATV 783 Query: 122 RVLQQSYPLLGA---KDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENT 176 +++ L R NR A+ + V H KS + Sbjct: 784 QLVGGFAVLEEGFLDPLGIGRDLNRAALAQTFREAAGNGIVTVAVNHFKSKGSGCGDGDD 843 Query: 177 ---YSPSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 + + A L W+ +I GD N + Sbjct: 844 DPVQGSCNATRTAAAGALAAWLDSDPTGSGDDDMLILGDLNSYAKEDPI-----TLLVNA 898 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-- 289 +DY + + + + I +E D Sbjct: 899 GYTDLAAYFLGDSAYGYVFSGRWGTLDYAMANPALLAQVAGVTEWHINADEPDAIDYDTR 958 Query: 290 -----------KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 959 FNPQAWFAGDAFRSSDHDPVLVGLN 983 >gi|115360279|ref|YP_777417.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD] gi|115285567|gb|ABI91083.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD] Length = 627 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 42/319 (13%), Positives = 86/319 (26%), Gaps = 48/319 (15%) Query: 19 SVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVF 70 A VR+ S+N+ N + + + R L + L AD++ Sbjct: 313 PQAD-VRVASFNVFNYFNGDGAGGGFGDPSGRGAKTPAAFARQEAKLVAALRALRADVIG 371 Query: 71 LQEMGSY-NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 L E+ + + A + + + + R + I A+ + + P Sbjct: 372 LMEIANNGHGPASAVQRLAARLGGGWRAVDPGTARLGRDAIAVALLYDSRTIE------P 425 Query: 130 LLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSC------ 181 + A NR + + V HLKS + S Sbjct: 426 VGRAATVALDGRNRPPLAQTFRRVDGTRAFTVAVNHLKSKNCPHATGPDLDQSDGQGCWN 485 Query: 182 SLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + ++ A+ + W+ + ++ GD N + ++ + Sbjct: 486 ATRTRAAERVAGWLATSPTGAAADGVLLIGDLNSYAKEDP-----LRALESRGYTNLVAR 540 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED---------------- 283 + +D+ + + I +E Sbjct: 541 FVGNAGYTYVFHGEAGNLDHALATPPLAARVKAVHTWHINADEPIALQAVPDYKTPAQQA 600 Query: 284 -DIKSRGKRLSDHCPISID 301 R SDH P+ ID Sbjct: 601 AYYAPDAYRSSDHDPVVID 619 >gi|299066602|emb|CBJ37792.1| EXODEOXYRIBONUCLEASE III [Ralstonia solanacearum CMR15] Length = 269 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 94/303 (31%), Gaps = 61/303 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+L + + + +D T + D++ LQE+ Sbjct: 1 MRVATWNVNSL--KVRLPHVLQWLGEREADATPI---------DLLCLQELK-------- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P + + + ++ + + +A+ + + + + + Sbjct: 42 LPDDRYP--LAELEAAGYASLFTGQKTYNGVAILARKAAMPEGRDVVRNIPGFAD--EQQ 97 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R V E+ G + V+ + + LDS + Y + L+ W+ + + Sbjct: 98 RVVAATYEVAGGPVRVISAYFPNGQALDSDKMVYK------MRWLAALQAWLQAEMAAHP 151 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GDFN + ++ ++ + F + Sbjct: 152 RLMLLGDFNIAPDDRDVHDPKKWEGMNLVSPEERAAFRALESAGLVDAFRMFEQED-KLF 210 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID+ ++ + + D + ++ SDH P+ Sbjct: 211 SWWDYRLFAFRRNAGLRIDHILLSPDLARLCESCHI-------DRVPRGWEQPSDHTPVV 263 Query: 300 IDY 302 Sbjct: 264 AAL 266 >gi|170763963|ref|ZP_02636372.2| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens B str. ATCC 3626] gi|170711168|gb|EDT23350.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens B str. ATCC 3626] Length = 262 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 45/296 (15%), Positives = 95/296 (32%), Gaps = 55/296 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+ + + + W + + + K+ DI+ QE + Sbjct: 4 LKVMTFNLKYDFKAQDNNEW-------SQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMD 56 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAKDSF 137 + + + + + D AI K VL+ P + F Sbjct: 57 DLLDEYS-------WVGEDREGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDF 109 Query: 138 SRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + + R +L + +I+G KI + + HL E ++ ++ + Sbjct: 110 NSSLPRICTKLKLKDKISGLKIDIYNTHL-----DHESELAREEGIKIILKEVK------ 158 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS--------LIRFPKEKDSRCNA 247 P++I GDFN + D+ + I ++ + Sbjct: 159 KNYSIEKTPYIIMGDFNCYL-----EDNLFNIIREEETNNTCFNVCYDNIKNNILGTFHY 213 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K IDY + + + N DD K G SDH P+ + + Sbjct: 214 FKGGYEGKIIDYILYSKE---------YEIKSLNIDDRKINGGYPSDHYPVICELE 260 >gi|127511624|ref|YP_001092821.1| endonuclease/exonuclease/phosphatase [Shewanella loihica PV-4] gi|126636919|gb|ABO22562.1| Endonuclease/exonuclease/phosphatase [Shewanella loihica PV-4] Length = 357 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 47/351 (13%), Positives = 104/351 (29%), Gaps = 66/351 (18%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQE 73 T++ A ++R+ S+N+ N + + +R+Y + D ++ QE Sbjct: 4 TSAAASQIRIASFNLYNFIAPPDAYYDFNNIYTQAQWQQKCDWIRRYLASHDPCVIGFQE 63 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + S A+ + + + F + +R A+A + + A Sbjct: 64 VFSIEALQALLAEAGYPYFVTVDRPEVSDD-FIYRHPVLALASKYPILSYEPCDIDQTVA 122 Query: 134 K---DSFSRAGNRRAVELLVEING-KKIWVLDIHLKSF--------------------CF 169 + +R + + + +H KS Sbjct: 123 SVMGIAPGFQYSRLPLRATIALPHLGPCDCYLVHFKSKRAQFDPELAVTPDSGSEPAASQ 182 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWI-------------TQKKESLVPFVIAGDFNRKIN 216 DSL S + + A+W I ++ ++ P ++ GDFN + Sbjct: 183 SDSLTIEKSEALFAIEAAAKWASSLIRGSEASLLRVAIARRRIDTRYPVILMGDFNDSLA 242 Query: 217 --------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-----ANKNLRNKIPI 257 ++ ++ D+ + + + S + + +L I Sbjct: 243 GGVLSALVSEDSRLLGVLGEEAFQDYRLQDAYLLHERSEYSPTSVARAPTHYHLNRGEVI 302 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKRLSDHCPISIDY 302 DY ++ Q Y+ D R +DH P+ + Sbjct: 303 DYILLSNEFDPHNHQCLAQVSQYHTYDSHLINPQYDRDSHSTDHAPVMVSL 353 >gi|251811372|ref|ZP_04825845.1| Sphingomyelin phosphodiesterase [Staphylococcus epidermidis BCM-HMP0060] gi|251805121|gb|EES57778.1| Sphingomyelin phosphodiesterase [Staphylococcus epidermidis BCM-HMP0060] Length = 334 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 42/299 (14%), Positives = 98/299 (32%), Gaps = 33/299 (11%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++ + N+ L +++ N + +D Y + + D+V L E+ A Sbjct: 42 DSLKITTHNVYFLPT----AIYPNWGQSQRADLISKADYIQ--NQDVVILNELFDKKASK 95 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGA 133 ++ + Y T + ++ N + + K V Q+ + + Sbjct: 96 RLSTRLHSQYPYQTPIVGKGTEGWQNTSGTYRKIKKVSGGVGIVSKWPIVQQEQH-IYKK 154 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 AGN+ + + NGK ++ HL++ + + Q +K Sbjct: 155 GCGADMAGNKGFAYIKINKNGKYHHIIGTHLQA----EDPTCFKGKDKDIRQSQMSEIKQ 210 Query: 194 WI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 +I + P I GD N I ++ + ++N + Sbjct: 211 FIKDKNIPKNEPVYIGGDLNV-IKDSDEYQQMANNLNVSLPTQFDGNAYSWDTSSNSIAK 269 Query: 253 N------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPIS 299 +DY ++D++ + + + + + + + SDH P+S Sbjct: 270 YNYPKLEPQHLDYILLDRDHAQPSSWHNDTHRVKSPEWSVKSWGKTYKYNDYSDHYPLS 328 >gi|144897972|emb|CAM74836.1| Endonuclease/exonuclease/phosphatase [Magnetospirillum gryphiswaldense MSR-1] Length = 262 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 39/306 (12%), Positives = 77/306 (25%), Gaps = 71/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+V+WNIN + LLRQ + L D++ LQE+ V ++ Sbjct: 1 MRVVTWNIN----------------SIRLRFDLLRQVVERLTPDVICLQEI---KVVDEL 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + +A+ K + G D R Sbjct: 42 FPADECRSL------GFPHIAFHGMKGYNGVAILSKRPIRETMTPSWCGRDD-------R 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + ++ L D + + + + + DW + Sbjct: 89 RHLVAKLDEAE------IHCLYVPAGGDIPDPQQNDKFAHKLDFLRQVTDWYAGTYKPGD 142 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N + D + + + Sbjct: 143 RVILTGDLNVAPLETDVWSHKQLLKVVSHTPIEVDLLDRMQASLGWVDAMRRFIPPSERL 202 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + L + SDH P Sbjct: 203 YTWWSYRSPDWEKNDRGRRLDHVWVTPALGDTLRSVEVLREC-------RSWTQPSDHVP 255 Query: 298 ISIDYD 303 + ++ D Sbjct: 256 VLVELD 261 >gi|254229170|ref|ZP_04922589.1| endonuclease/exonuclease/phosphatase family [Vibrio sp. Ex25] gi|262395520|ref|YP_003287373.1| hypothetical protein VEA_000220 [Vibrio sp. Ex25] gi|151938255|gb|EDN57094.1| endonuclease/exonuclease/phosphatase family [Vibrio sp. Ex25] gi|262339114|gb|ACY52908.1| hypothetical protein VEA_000220 [Vibrio sp. Ex25] Length = 317 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 103/312 (33%), Gaps = 30/312 (9%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 S ++ V+ N+ S+++ ++ + L+AD++ LQE+ Sbjct: 2 SQPSRITFVTANLFNFVAPPDAYYDFENIYSLEQWQDKLAWTQRQIEKLEADVIGLQEVF 61 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLG 132 S F + +++T + + AIA R +V + L Sbjct: 62 SIEKTQAFFSTIGYP-YFATVDTPHVEDEYIYSSPVVAIASRFPIEKVQAVEFDLATLEP 120 Query: 133 AKDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLDSLENT-------YSPSCSLL 184 S + +R+ + ++ I V HLKS DS + S Sbjct: 121 FGISVAPEFSRKPIYAQVIHPVLGHIAVYVTHLKSQRPADSEQPETSSTIIGRWLSTQQR 180 Query: 185 SQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--------NDSLI 235 +A L+D + + ++ +P V+ GD N+ I N + + Sbjct: 181 GWEAAMLRDAMQKRYRKEPMPTVLMGDMNQPITPTSVNSALVANTGDSVTELQLKDGWSL 240 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRG 289 + KD R + + +DY ++ Q + Y + R Sbjct: 241 QSDALKDERPATHYHFSTGNVLDYILLSQEFDTLSDISVAEVVDYQVSNQHLINPIYDRD 300 Query: 290 KRLSDHCPISID 301 K SDH +++ Sbjct: 301 KNASDHAFVALT 312 >gi|313199970|ref|YP_004038628.1| exodeoxyribonuclease III xth [Methylovorus sp. MP688] gi|312439286|gb|ADQ83392.1| exodeoxyribonuclease III Xth [Methylovorus sp. MP688] Length = 255 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 84/303 (27%), Gaps = 72/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N+L+ + + D++ LQE ++ Sbjct: 1 MKLATWNVNSLN----------------VRLPHVLDWCTANQPDVLCLQETKQEDS---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y I ++ S + +A+ ++V + Sbjct: 41 ------KFPYEALTAIGYNAIHSGQKTYNGVAILSRHVLE------HPSYGIPDFADEQK 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V K I ++ ++ + +DS + Y L + + + Sbjct: 89 RLIAATV----KGIRIVCAYIPNGQSVDSDKYQYK------LNWLASLTTHLQAELAAHP 138 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249 + GD+N +D + + L + + + Sbjct: 139 KLALLGDYNIAPEDRDVHDPAAWLGQVLVSEPERNAFQGLVGLGLHDTFRLFEQPEASFS 198 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ D + +R SDH P+ + Sbjct: 199 WWDYRMAGFRRNLGLRIDHILVSTPLLAACKASWI-------DKAPRKLERPSDHTPVVL 251 Query: 301 DYD 303 + Sbjct: 252 ELS 254 >gi|54296672|ref|YP_123041.1| hypothetical protein lpp0703 [Legionella pneumophila str. Paris] gi|53750457|emb|CAH11851.1| hypothetical protein lpp0703 [Legionella pneumophila str. Paris] Length = 256 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 84/305 (27%), Gaps = 76/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +L SWN+N+L + Q+ ++ D++ +QE Sbjct: 2 FKLASWNVNSL----------------KVRLEQVLQWLESSQVDLLAMQET--------- 36 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + S + +A+ + + R Sbjct: 37 -KLTDENFPVASFTDKGYHVIFSGQKTYNGVAIISRYPMT------DIQTDIPELEDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V K I ++++++ + L S + Y + +I + Sbjct: 90 RILAATV----KGIRLINLYVPNGGELTSDKYQYKLD------WLNKVTRFIENQLSIYS 139 Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247 + GDFN +D F K ++ L + A Sbjct: 140 KVAVVGDFNIAPEDRDVHDPVEWEGCVLVSPAERQAFMKILELG--LHDSFRNFAQEEKA 197 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ Q D + +R SDH P+ Sbjct: 198 FSWWDYRAAAFRRNRGLRIDHVLLSHELNALCRQS-------KIDKEPRKAERPSDHAPV 250 Query: 299 SIDYD 303 ++ + Sbjct: 251 WVELE 255 >gi|21224654|ref|NP_630433.1| exonuclease [Streptomyces coelicolor A3(2)] gi|3367747|emb|CAA20072.1| putative exonuclease [Streptomyces coelicolor A3(2)] Length = 259 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 79/304 (25%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N T+ L + ++ D++ LQE A Sbjct: 1 MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCLQEAKVAEA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + R + +AV + L G R Sbjct: 41 ------QFPFDALREAGYEAAVHATGRWNGVAVLSRVGLEDVVKG-LPGDPGYEGVQEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + +D Y Q + L+ + Sbjct: 94 A-----ISATCGPVRVWSVYVPNGREVDHPHYAYK------LQWFEALRAAVEGDAAGGR 142 Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF + GD+N D ++ P+ + Sbjct: 143 PFAVLGDYNVAPTDDDVYDRAAFEGATHVTPAERAALASLRGAGLSDVVPRPLKYD-HPF 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID ++ K + D + +GK SDH P+ Sbjct: 202 TYWDYRQLCFPKNRGMRIDLVYGNEPFAKAVTDSYV-------DREERKGKGASDHAPVV 254 Query: 300 IDYD 303 +D D Sbjct: 255 VDLD 258 >gi|149199457|ref|ZP_01876492.1| endonuclease/exonuclease/phosphatase family protein [Lentisphaera araneosa HTCC2155] gi|149137392|gb|EDM25810.1| endonuclease/exonuclease/phosphatase family protein [Lentisphaera araneosa HTCC2155] Length = 590 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 41/322 (12%), Positives = 90/322 (27%), Gaps = 58/322 (18%) Query: 5 YVLALVFFLVP--CTASVAQ----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 ++L + + C A +V+ +S+NI ++ + W L+ Sbjct: 10 FILVTINLALAQLCAQESADSQVLEVKAMSFNIRNSYARDKENSWDLRK-------ELVY 62 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + ++ D++ LQE + ++A+ K Sbjct: 63 KVIQDYAPDVLGLQEANHEQLGELKIQFPNYRHIGVASDGGT-------KGQYSAVLYLK 115 Query: 119 KNVRVLQQSYPLLGAKDS-----FSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLD 171 VRVL + + A R ++ K++ V + HL Sbjct: 116 SKVRVLDSGDFWISETPEKVSKSWRSAHRRICTWARLQELKTSKELVVYNTHLDDGSG-- 173 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN---------D 222 + A+ + + +K F++ GDFN + Sbjct: 174 ----------KAREKGAEMIMKHLHGQKLKDA-FIVMGDFNAAEESKAIAQVKGTGAFVN 222 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + ++ + + + IDY + ++ + Sbjct: 223 AVYPKAVDPFRVLNPEAKNVGTYHGFSGKDSGAKIDYIFV---------PKNAQVLAAEI 273 Query: 283 DDIKSRGKRLSDHCPISIDYDF 304 G+ SDH P++ F Sbjct: 274 LKTNHNGRYPSDHFPVTARVSF 295 >gi|13471192|ref|NP_102761.1| exodeoxyribonuclease III [Mesorhizobium loti MAFF303099] gi|14021936|dbj|BAB48547.1| exodeoxyribonuclease III [Mesorhizobium loti MAFF303099] Length = 264 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 86/302 (28%), Gaps = 66/302 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V+WNIN + L + DIV LQE+ + + Sbjct: 1 MKIVTWNING----------------VRARIGNLTHWLTESAPDIVCLQEIKTVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ + +A+ K D +R Sbjct: 41 ------QFPRAEIEALGYNVETNGQKGFNGVALLSKLRFDEVIRGLPGDDTDEQARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + + + V ++L + +D L+ W ++ + Sbjct: 92 --IEGVFSTDKGALRVASLYLPNGNPIDDE-----KKFPYKLNWMARLERWAEERLKLEE 144 Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----------NANK 249 V+AGD+N + + + + F + + + Sbjct: 145 ALVLAGDYNVIPEPIDARFPENWLGDALFQPQTRQAFRRLLNLGFTEAVRAVTDAPDTYT 204 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A S + + ++ SDH P++I Sbjct: 205 FWDYQAGAWQKNNGIRIDHLLLSPEAANRFSSASIEKHV-------RAWEKPSDHVPVAI 257 Query: 301 DY 302 D Sbjct: 258 DL 259 >gi|323338887|gb|EGA80101.1| Ccr4p [Saccharomyces cerevisiae Vin13] Length = 837 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 40/327 (12%), Positives = 84/327 (25%), Gaps = 42/327 (12%) Query: 20 VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + ++S+N + + + L++ + D+D++ LQE+ S Sbjct: 501 AKRTFTVLSYNTLCQHYATPKMYRYTPSWALSWDYRRNKLKEQILSYDSDLLCLQEVESK 560 Query: 78 NAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 P + ++ R +DS I ++ +++ + Sbjct: 561 TFEEYWVPLLDKHGYTGIFHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDFSG 620 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-----DSLENTYSPSCSLLSQQA 188 + R L +N + + + + + + Q Sbjct: 621 AWMKHKKFQRTEDYLNRAMNKDNVALFLKLQHIPSGDTIWAVTTHLHWDPKFNDVKTFQV 680 Query: 189 QWLKDWITQKKESLV-----------PFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLI 235 L D + + P +I GDFN IN + I + Sbjct: 681 GVLLDHLETLLKEETSHNFRQDIKKFPVLICGDFNSYINSAVYELINTGRVQIHQEGNGR 740 Query: 236 RFPKEKDSRC-----------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277 F + N IDY + Sbjct: 741 DFGYMSEKNFSHNLALKSSYNCIGELPFTNFTPSFTDVIDYIWFSTHALRVRGLLGEVDP 800 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ K SDH P+ ++F Sbjct: 801 EYVSKFIGFPNDKFPSDHIPLLARFEF 827 >gi|311694667|gb|ADP97540.1| exonuclease III [marine bacterium HP15] Length = 270 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 34/285 (11%), Positives = 69/285 (24%), Gaps = 59/285 (20%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 + L L D + LQE + R + + Sbjct: 12 RTRLHQLEAVIDTLAPDFIGLQETKVQDD----------DFPVEAIRDLGYHVHFHGQKT 61 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 H +A+ K +DS RR + +NG+K+ V++ F Sbjct: 62 HYGVALLSKAEPEEVIKGYPWDGEDS-----QRRLITGHFTVNGEKLTVIN-----GYFP 111 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL------------ 218 + + L ++ + K++ V+ GD N Sbjct: 112 QGESRDHPVKFPAKEKFYGDLMRYLDELKKAGGHVVVMGDMNISPTDKDIGIGADNAKRW 171 Query: 219 ---------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----------PID 258 ++ ++ F + + ID Sbjct: 172 LRTGKCSFLPEEREWLGQVESRGYTDVFRHLHPDEADTFSWFDYRSKGFERDPKRGLRID 231 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + +R SDHCP+ ++ Sbjct: 232 LIMASDSLLPKARKAGV-------SYDIRAMERPSDHCPVWASFE 269 >gi|307325474|ref|ZP_07604676.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger Tu 4113] gi|306888943|gb|EFN19927.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger Tu 4113] Length = 286 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 36/290 (12%), Positives = 79/290 (27%), Gaps = 54/290 (18%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + +++R+ ++NI+ + V D + + ++L D++ LQE+ Y Sbjct: 36 TDPRRLRVATFNIHHGAGPADVL-----------DLERVARVIEDLRVDVIGLQEVDRYW 84 Query: 79 AVAKVFPKNTWCIFYSTERLINHSK------RDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + + W + + AV + + L Sbjct: 85 KRSGFVDQPAWLAERLGMQHAFGANLDLDPEEPGRPRRQYGTAVLSRGPIRSWTNTHLPL 144 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 R ++ +++ G + HL+ +QA + Sbjct: 145 VPGH----EQRGLLQATLDVRGTCVEFAVTHLQH------------DDNKERERQAARIV 188 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + + S V+ GD N I +P+ L Sbjct: 189 ELLG---SSPEHTVLVGDLNATPETPEIG------ILTGALDDVWPRAGSGDGFTYDALD 239 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ + ++ + + SDH P+ D Sbjct: 240 PHARIDFHLASRDLGPL------------TAQVVTADPEASDHLPVVSDL 277 >gi|190406669|gb|EDV09936.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Saccharomyces cerevisiae RM11-1a] Length = 840 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 40/327 (12%), Positives = 84/327 (25%), Gaps = 42/327 (12%) Query: 20 VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + ++S+N + + + L++ + D+D++ LQE+ S Sbjct: 504 AKRTFTVLSYNTLCQHYATPKMYRYTPSWALSWDYRRNKLKEQILSYDSDLLCLQEVESK 563 Query: 78 NAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 P + ++ R +DS I ++ +++ + Sbjct: 564 TFEEYWVPLLDKHGYTGIFHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDFSG 623 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-----DSLENTYSPSCSLLSQQA 188 + R L +N + + + + + + Q Sbjct: 624 AWMKHKKFQRTEDYLNRAMNKDNVALFLKLQHIPSGDTIWAVTTHLHWDPKFNDVKTFQV 683 Query: 189 QWLKDWITQKKESLV-----------PFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLI 235 L D + + P +I GDFN IN + I + Sbjct: 684 GVLLDHLETLLKEETSHNFRQDIKKFPVLICGDFNSYINSAVYELINTGRVQIHQEGNGR 743 Query: 236 RFPKEKDSRC-----------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277 F + N IDY + Sbjct: 744 DFGYMSEKNFSHNLALKSSYNCIGELPFTNFTPSFTDVIDYIWFSTHALRVRGLLGEVDP 803 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ K SDH P+ ++F Sbjct: 804 EYVSKFIGFPNDKFPSDHIPLLARFEF 830 >gi|313674251|ref|YP_004052247.1| endonuclease/exonuclease/phosphatase [Marivirga tractuosa DSM 4126] gi|312940949|gb|ADR20139.1| Endonuclease/exonuclease/phosphatase [Marivirga tractuosa DSM 4126] Length = 334 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 91/311 (29%), Gaps = 50/311 (16%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--- 75 S++ + ++++NI LS + + + D D + LQE+ Sbjct: 45 SISDTLSVLTYNIGYLSGMTNNRPVDREESLYSQNLARAIDLLSDYDFDFMGLQEVDFQS 104 Query: 76 ----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT---------AIAVRKKNVR 122 +YN + + + + I A+ + + + Sbjct: 105 SRSFNYNQLDSLGVHLNFHQGAYSVNWDKSYVPFPYFPIRNHFGRMYSGQAVLSKMQLLS 164 Query: 123 VLQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + + A R +++ + V+++HL++F Sbjct: 165 NELTVFDKPINAPFYYNAFYIDRVMQINKIQLYSDTLIVMNVHLEAF------------D 212 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN--------NDDFWKTIDPND 232 QA+ + + P ++ GDFN + + + + Sbjct: 213 RETRELQAEEVLVEFNKW-SKKYPVILMGDFNSRPPFASEVLEEEKTIEIFLEEPLIGEA 271 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + +S+ +DY ++N + + D+ + + Sbjct: 272 ISEERYLQNESQFFTFDTADPYERLDYVFYNKNKIRKIES-----------DVLREAEDI 320 Query: 293 SDHCPISIDYD 303 SDH P+ + + Sbjct: 321 SDHLPVWMTFT 331 >gi|302877385|ref|YP_003845949.1| exodeoxyribonuclease III Xth [Gallionella capsiferriformans ES-2] gi|302580174|gb|ADL54185.1| exodeoxyribonuclease III Xth [Gallionella capsiferriformans ES-2] Length = 255 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 83/303 (27%), Gaps = 74/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N+L + + D++ LQE +A Sbjct: 1 MKLATWNVNSL----------------KVRLPQVLDWLAANPVDVLCLQETKQQDA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ + + Q + Sbjct: 41 ------DFPDTELAAAGYHTVFAGQKTYNGVAILSREAAIDVQ------IGIPGFEDEQK 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + I V+D+++ + DS + Y L DW+ ++ Sbjct: 89 RVIAATF----GDIRVVDVYIPNGQSPDSDKYQYK------LGWLAALHDWLKEELVRYP 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GD+N D +K++ + + + Sbjct: 139 KLVLLGDYNIAPEDRDVHDPAAWVGNVLVSPPERDAFKSLLALGLTDSYRLFEQAD-KTF 197 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ++ ID+ ++ D + +R SDH P+ Sbjct: 198 SWWDYRMMGFRRNLGMRIDHILISAPLVAQCKSCII-------DKAPRKLERPSDHTPVV 250 Query: 300 IDY 302 ++ Sbjct: 251 VEL 253 >gi|6319298|ref|NP_009381.1| Ccr4p [Saccharomyces cerevisiae S288c] gi|308153426|sp|P31384|CCR4_YEAST RecName: Full=Glucose-repressible alcohol dehydrogenase transcriptional effector; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase gi|171854|gb|AAC04936.1| Ccr4p: Carbon catabolite repressor protein [Saccharomyces cerevisiae] gi|285810181|tpg|DAA06967.1| TPA: Ccr4p [Saccharomyces cerevisiae S288c] Length = 837 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 40/327 (12%), Positives = 84/327 (25%), Gaps = 42/327 (12%) Query: 20 VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + ++S+N + + + L++ + D+D++ LQE+ S Sbjct: 501 AKRTFTVLSYNTLCQHYATPKMYRYTPSWALSWDYRRNKLKEQILSYDSDLLCLQEVESK 560 Query: 78 NAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 P + ++ R +DS I ++ +++ + Sbjct: 561 TFEEYWVPLLDKHGYTGIFHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDFSG 620 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-----DSLENTYSPSCSLLSQQA 188 + R L +N + + + + + + Q Sbjct: 621 AWMKHKKFQRTEDYLNRAMNKDNVALFLKLQHIPSGDTIWAVTTHLHWDPKFNDVKTFQV 680 Query: 189 QWLKDWITQKKESLV-----------PFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLI 235 L D + + P +I GDFN IN + I + Sbjct: 681 GVLLDHLETLLKEETSHNFRQDIKKFPVLICGDFNSYINSAVYELINTGRVQIHQEGNGR 740 Query: 236 RFPKEKDSRC-----------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277 F + N IDY + Sbjct: 741 DFGYMSEKNFSHNLALKSSYNCIGELPFTNFTPSFTDVIDYIWFSTHALRVRGLLGEVDP 800 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ K SDH P+ ++F Sbjct: 801 EYVSKFIGFPNDKFPSDHIPLLARFEF 827 >gi|121608305|ref|YP_996112.1| endonuclease/exonuclease/phosphatase [Verminephrobacter eiseniae EF01-2] gi|121552945|gb|ABM57094.1| Endonuclease/exonuclease/phosphatase [Verminephrobacter eiseniae EF01-2] Length = 245 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 85/288 (29%), Gaps = 52/288 (18%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--- 76 +R+ S+NI+ + + L + LDADIV LQE+ Sbjct: 3 QDDILRVASYNIH--------KGVQGIGPGRRLEIHNLGLAIEQLDADIVCLQEVRKLHR 54 Query: 77 --YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + A+ + + Q L Sbjct: 55 REQAYFQRWPELPQAQFLAPEGYEAVYRTNAVTRHGEHGNALLSRWPVIGHQHQDL---- 110 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 S R R + + ++++G+ + V+ +HL +Q + L+ + Sbjct: 111 -SDHRFEQRGLLHVQLDVHGRPLHVIVVHLGLIAGS-------------RMRQIERLQGF 156 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 I ++ S P V+AGDFN + + ++ R Sbjct: 157 IEREVPSAAPLVVAGDFNDWGVQVKRMLAGFALLE----------FDAPRAFTYPARLPL 206 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D+ L S R+SDH P+ ++ Sbjct: 207 VQLDHVYARG-----LAPLSLHVPRGRI------WWRMSDHLPLIAEF 243 >gi|28897777|ref|NP_797382.1| exonuclease III [Vibrio parahaemolyticus RIMD 2210633] gi|260363798|ref|ZP_05776553.1| exodeoxyribonuclease III [Vibrio parahaemolyticus K5030] gi|260876941|ref|ZP_05889296.1| exodeoxyribonuclease III [Vibrio parahaemolyticus AN-5034] gi|260897916|ref|ZP_05906412.1| exodeoxyribonuclease III [Vibrio parahaemolyticus Peru-466] gi|28805990|dbj|BAC59266.1| exodeoxyribonuclease III [Vibrio parahaemolyticus RIMD 2210633] gi|308085493|gb|EFO35188.1| exodeoxyribonuclease III [Vibrio parahaemolyticus Peru-466] gi|308093887|gb|EFO43582.1| exodeoxyribonuclease III [Vibrio parahaemolyticus AN-5034] gi|308113909|gb|EFO51449.1| exodeoxyribonuclease III [Vibrio parahaemolyticus K5030] Length = 268 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 80/309 (25%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K + Q G R Sbjct: 42 -------FPIEDVEAMGYKVYFHGQKAHYGVAMLCKQEPIRVQK----GFPTDNEEHQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + NG+K+ VL+ F + Q + L ++ + Sbjct: 91 MIMATFENENGEKVTVLN-----GYFPQGDNINHETKFPYKRQFYKDLMTYLNDHHSNDE 145 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ KT+ F K Sbjct: 146 QLIVMGDINISPIDSDIGIGEPNRKRWLKTGKCSFQPEEREWLKTLLDWGFEDTFRKLYP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + + I+ D ++ S Sbjct: 206 EVNDRFSWFDYRSRGFDDNRGLRIDVILATPSLAQKCIESGI-------DYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|328473247|gb|EGF44095.1| exonuclease III [Vibrio parahaemolyticus 10329] Length = 268 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 82/309 (26%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K + Q G R Sbjct: 42 -------FPIEDVEAMGYKVYFHGQKAHYGVAMLCKQEPIRVQK----GFPTDNEEHQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+K+ VL+ F ++ Q + L ++ + Sbjct: 91 MIMVTFEDENGEKVTVLN-----GYFPQGDNISHETKFPYKRQFYKDLMTYLNDHHSNDE 145 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ KT+ F K Sbjct: 146 QLIVMGDINISPIDSDIGIGEPNRKRWLKTGKCSFQPEEREWLKTLLDWGFEDTFRKLYP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + + I+ D ++ S Sbjct: 206 EVNDRFSWFDYRSRGFDDNRGLRIDVILATPSLAQKCIESGI-------DYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|325962168|ref|YP_004240074.1| extracellular nuclease [Arthrobacter phenanthrenivorans Sphe3] gi|323468255|gb|ADX71940.1| putative extracellular nuclease [Arthrobacter phenanthrenivorans Sphe3] Length = 1467 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 55/348 (15%), Positives = 99/348 (28%), Gaps = 68/348 (19%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGV----------------SLWKNSVKRTTSDYT---- 55 A+V ++L S+N+ G ++ R ++ Sbjct: 459 APAAVGGNLKLASFNVLNYFPTTGDQLTGCTYYDDREGNPITVRGGCDARGAANAENIKR 518 Query: 56 ---LLRQYAKNLDADIVFLQEMGS--------YNAVAKVFPKNT------WCIFYSTERL 98 + AD+V L E+ + +A+A++ W S Sbjct: 519 QQDKIVAAITKAGADVVTLMEIENSAQFGKDRDDALARLVEALNIETPGIWDYVRSPANA 578 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI----NG 154 S + I TA +K + S D+ + A R+ + + + G Sbjct: 579 PPLSDE---DMIRTAFIYKKAVAEPVGDSII---HNDTVAFATARKPLAQVFKPVGGDPG 632 Query: 155 KKIWVLDIHLKSFCFLDSLENTYS---PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAG 209 + + H KS + E+T S + QA+ L D+ T Q+ + + G Sbjct: 633 TEFIAIANHFKSKGSAATPEDTDKGQGASNLARTAQAKSLLDFATSLQESKGTDKVFLIG 692 Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269 DFN N D R ++ +D+ + A Sbjct: 693 DFNAYAKEDPINVFTAAGYVNQDGKARNADGTSK--HSYLYGGMVGSLDHILASPAADAA 750 Query: 270 LIQESFSEILYNEDDIKSRG--------------KRLSDHCPISIDYD 303 + I E R SDH P+ + D Sbjct: 751 VTGADIWNINSVESVALEYSRYNSNITNYYAPDQYRASDHDPVIVGLD 798 >gi|21106532|gb|AAM35338.1| nuclease [Xanthomonas axonopodis pv. citri str. 306] Length = 1131 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 40/340 (11%), Positives = 93/340 (27%), Gaps = 54/340 (15%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69 P A V + ++N+ + + + +N DI+ Sbjct: 516 PAPMPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNYLHTPDIL 575 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK-----KN 120 E+ + + + + + ++ + + + I V+ Sbjct: 576 GTVEVENLGVLQTLAARVNADAVAAGQQDPKYVAYLQEGNDVGGIDVGFLVKTADIAGGV 635 Query: 121 VRVLQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGK-----KIWVLDIHLKSFC 168 RV S G +++ G R + L ++ + + +H +S Sbjct: 636 PRVEVLSIAQEGKTTTWTEPGGGVSLLNDRPPLVLTANVHQAEGRTLPLTAIVVHQRSLN 695 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFW- 225 ++ + + + QA++L + Q+ ++ GDFN G D Sbjct: 696 GAETDDAAGTRIRAKRQAQAEYLARLLQTRQQLNPDEKVLVMGDFNAFEFNDGYVDAMGT 755 Query: 226 -----------------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 + D + + N +D+ + ++ + Sbjct: 756 VTGKPAPDAQTVVGGDGADLVNPDYTDLTWFNTPDQSYSYAFDGNVQSLDHILANEALMR 815 Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300 S S + RLSDH P + Sbjct: 816 APQIASLSVGHARINADFPGTARNDANTPTRLSDHDPTVV 855 >gi|77748525|ref|NP_640802.2| nuclease [Xanthomonas axonopodis pv. citri str. 306] Length = 1193 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 40/340 (11%), Positives = 93/340 (27%), Gaps = 54/340 (15%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69 P A V + ++N+ + + + +N DI+ Sbjct: 578 PAPMPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNYLHTPDIL 637 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK-----KN 120 E+ + + + + + ++ + + + I V+ Sbjct: 638 GTVEVENLGVLQTLAARVNADAVAAGQQDPKYVAYLQEGNDVGGIDVGFLVKTADIAGGV 697 Query: 121 VRVLQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGK-----KIWVLDIHLKSFC 168 RV S G +++ G R + L ++ + + +H +S Sbjct: 698 PRVEVLSIAQEGKTTTWTEPGGGVSLLNDRPPLVLTANVHQAEGRTLPLTAIVVHQRSLN 757 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFW- 225 ++ + + + QA++L + Q+ ++ GDFN G D Sbjct: 758 GAETDDAAGTRIRAKRQAQAEYLARLLQTRQQLNPDEKVLVMGDFNAFEFNDGYVDAMGT 817 Query: 226 -----------------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 + D + + N +D+ + ++ + Sbjct: 818 VTGKPAPDAQTVVGGDGADLVNPDYTDLTWFNTPDQSYSYAFDGNVQSLDHILANEALMR 877 Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300 S S + RLSDH P + Sbjct: 878 APQIASLSVGHARINADFPGTARNDANTPTRLSDHDPTVV 917 >gi|54309891|ref|YP_130911.1| exonuclease III [Photobacterium profundum SS9] gi|46914330|emb|CAG21109.1| putative exodeoxyribonuclease III [Photobacterium profundum SS9] Length = 268 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 86/310 (27%), Gaps = 74/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ + D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQALIEKHQPDVIGLQEIKVHDDA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K V Q +D+ R Sbjct: 42 -------FPLADVEAMGYKVYHHGQKAHYGVAMLCKQEPVNIQKGFPTDDEDA-----QR 89 Query: 144 RAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + E +GKK+ VL+ F ++ + L +++ + Sbjct: 90 RMIMATFEQEDGKKVTVLN-----GYFPQGENLSHETKFPAKEKFYADLMNYLNTHHTNE 144 Query: 203 VPFVIAGDFNRKINYLG---------------------NNDDFWKTIDPNDSLIRFPKEK 241 ++ GD N L ++ KT+ F + Sbjct: 145 EEVIVMGDINISPIDLDIGIGPANAKRWLKTGKCSFQLIEREWLKTLMDWGFTDTFRQLH 204 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID + + I D ++ Sbjct: 205 PDVDDQFSWFDYRSKGFVDNRGLRIDVVLATPSLAARCIDAGI-------DYELRGIEKP 257 Query: 293 SDHCPISIDY 302 SDH PI + Sbjct: 258 SDHAPIWSTF 267 >gi|260545435|ref|ZP_05821176.1| exodeoxyribonuclease III [Brucella abortus NCTC 8038] gi|260096842|gb|EEW80717.1| exodeoxyribonuclease III [Brucella abortus NCTC 8038] Length = 279 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 91/315 (28%), Gaps = 69/315 (21%) Query: 13 LVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 +PC A +++ +WNIN + L+ + + DIV Sbjct: 7 CLPCPARAHNHYGMKIATWNIN----------------SVKARIDNLQHWLRESSPDIVC 50 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 LQE+ S + + + +A+ K Sbjct: 51 LQEIKSVDE----------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLP 100 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 D +R +E + + + V+ ++L + +D+ + Y S Q Sbjct: 101 GDDSDEQARF-----IEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQR 149 Query: 191 LKDWITQKKESLVPFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIR 236 L++W ++ P V+AGD+N + + N Sbjct: 150 LENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTD 209 Query: 237 FPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + + ID+ ++ A I + + + Sbjct: 210 AIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------R 262 Query: 288 RGKRLSDHCPISIDY 302 ++ SDH P+++ Sbjct: 263 AWEKPSDHVPVTVTL 277 >gi|294141415|ref|YP_003557393.1| extracellular nuclease [Shewanella violacea DSS12] gi|293327884|dbj|BAJ02615.1| extracellular nuclease, putative [Shewanella violacea DSS12] Length = 943 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 43/327 (13%), Positives = 90/327 (27%), Gaps = 50/327 (15%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT------SDYTLLRQYAKNLDADIVFLQ 72 + L S+N+ +G + + + ++AD++ L Sbjct: 454 AAGGNFTLASFNVLNYFNGDGAGAGFPTPRGADTAAEFTRQRDKIIAAMVAINADVLGLM 513 Query: 73 EMGS-----YNAVAKVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQ 125 E+ + +A+A + I + ++ + + I + R V + Sbjct: 514 EIENDGFGSESAIADLVSGLNLAIGETRYAYVSAATAAGIGTDAITVGMIYRLDKVSLDG 573 Query: 126 QSYPLLGAKDS--------FSRAGNRRAVE--LLVEINGKKIWVLDIHLKSFCFL----- 170 + L A F+ NR + + + I V H KS Sbjct: 574 VAKVLSSANSPLDANNNPLFNDGKNRPMLTQGFRHLDSDEVIVVAVNHFKSKGSDCDSLG 633 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 D N +C+L +A + + ++ GD N + Sbjct: 634 DPDMNDGQGNCNLTRTRAAEAVGLWLEAEYGEADVLVMGDLNAYGQENP-----LTALKN 688 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG- 289 F + +D+ + + + +I + I +E + Sbjct: 689 AGFTELFDHLDKDNAYSYVYSGESGQLDHALANVSLLDKIIDVTEWHINTDEPRLLDYNQ 748 Query: 290 ----------------KRLSDHCPISI 300 R SDH P+ I Sbjct: 749 EFKSDAQLIDLYNADAYRSSDHDPVII 775 >gi|109898960|ref|YP_662215.1| exodeoxyribonuclease III [Pseudoalteromonas atlantica T6c] gi|109701241|gb|ABG41161.1| Exodeoxyribonuclease III [Pseudoalteromonas atlantica T6c] Length = 269 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 78/309 (25%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN + L+ DI+ LQE+ +N + Sbjct: 1 MKIISFNING----------------IRARLHQLQALIDKHQPDIIGLQEIKVHNDM--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ H +A+ K Q G A R Sbjct: 42 -------FPVADVEAMGYNVYFHGQKAHYGVAMLCKKEPTDVQ----YGFPTDDEDAQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + NG+ + VL+ F ++ + + L ++ Sbjct: 91 MIMVSYPMPNGETVRVLN-----GYFPQGENRSHETKFPAKRKYYEDLSTYLNTHHTPDD 145 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N L + + F Sbjct: 146 NVIVMGDVNISHTDLDIGIGEPNRKRWLQTGKCSFLPEERVWLNDLIDWGFTDGFRTLNP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + ID + + ++ L D ++ S Sbjct: 206 ETNEHFSWFDYRSKGFLDNRGLRIDLILATKKLHESLTDAGI-------DYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI ++ Sbjct: 259 DHAPIWAEF 267 >gi|239831752|ref|ZP_04680081.1| exodeoxyribonuclease III (xth) [Ochrobactrum intermedium LMG 3301] gi|239824019|gb|EEQ95587.1| exodeoxyribonuclease III (xth) [Ochrobactrum intermedium LMG 3301] Length = 272 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 85/313 (27%), Gaps = 70/313 (22%) Query: 16 CTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + A +++ +WNIN + L + K DIV LQ Sbjct: 2 PSPPQAHNHSGMKIATWNING----------------VKARIDNLLHWLKESSPDIVCLQ 45 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ S + + + +A+ K Sbjct: 46 EIKSVDD----------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINRGLPGD 95 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 D +R +E + + + V+ ++L + +D+ + Y S Q L+ Sbjct: 96 DSDEQARF-----IEGVYSTDKGVVRVVSLYLPNGNPVDTEKFPYKLS------WMQRLE 144 Query: 193 DWITQKKESLVPFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIRFP 238 W + P V+AGD+N + + N Sbjct: 145 LWARDRLALEEPLVLAGDYNVIPEPEDARNPGQWVGDALFQPQSRQAFRRLENMGFTDAI 204 Query: 239 KEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + ID+ ++ A I + + Sbjct: 205 RASTDEAGIYSFWDYQAGAWQKNNGIRIDHLMLSPEAANRFISSDVEKHV-------RAW 257 Query: 290 KRLSDHCPISIDY 302 ++ SDH P++I Sbjct: 258 EKPSDHVPVTIRL 270 >gi|197285354|ref|YP_002151226.1| exodeoxyribonuclease III [Proteus mirabilis HI4320] gi|194682841|emb|CAR43141.1| exodeoxyribonuclease III [Proteus mirabilis HI4320] Length = 268 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 78/309 (25%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP T + + H +A+ K V + R Sbjct: 42 FP-------LETVSALGYHVFYHGQKGHYGVALLTKAKPVAVRK-----GFPGDGEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + +E + V++ F + ++ L+ ++T Sbjct: 90 RMIMADIETPAGLLTVMN-----GYFPQGESRDHETKFPAKAKFYADLQQYLTTSLTPSS 144 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N ++ T+ + + Sbjct: 145 PVLIMGDLNISPTDKDIGIGENNMKRWLKMGKCSFLPEEREWLATLMGWGLTDTYRAQHP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + I D ++ S Sbjct: 205 EVEDQFSWFDYRSKGFDDNRGLRIDLLLASRCLADNCISTGI-------DYDIRAMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ ++ Sbjct: 258 DHAPVWAEF 266 >gi|120612279|ref|YP_971957.1| endonuclease/exonuclease/phosphatase [Acidovorax citrulli AAC00-1] gi|120590743|gb|ABM34183.1| Endonuclease/exonuclease/phosphatase [Acidovorax citrulli AAC00-1] Length = 252 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 85/285 (29%), Gaps = 53/285 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NI+ + + L + LDADIV LQE+ + Sbjct: 13 LRIATYNIH--------KGVQGLGPARRLEIHNLGHAVEQLDADIVCLQEVRKVH-RRGA 63 Query: 84 FPKNTWCIFYSTERLINHSKRDSNN------DIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 W E L A+ + + Q S Sbjct: 64 RHFPRWPELPQAEFLAPEGYEAVYRTNAFTRHGEHGNALLTRWPVIGHQH-----EDMSD 118 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R R + + VE+ G+++ + +HL +Q + L+ ++ + Sbjct: 119 HRFELRGLLHVEVEVQGRRVHAIVVHLGLIPGS-------------RVRQVEQLQRFVAR 165 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 + P V+AGDFN D + + E + R + + Sbjct: 166 EVPPGAPLVVAGDFN---------DWGRQVKHALAAFGLREYEGEPRALTYPARLPLVQL 216 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D+ + + R+SDH P+ ++ Sbjct: 217 DHVYVRG-----MEPMGLHVPRGRI------WWRMSDHLPLIAEF 250 >gi|94309326|ref|YP_582536.1| endonuclease/exonuclease/phosphatase [Cupriavidus metallidurans CH34] gi|93353178|gb|ABF07267.1| Putative endonuclease/exonuclease/phosphatase protein [Cupriavidus metallidurans CH34] Length = 251 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 50/286 (17%), Positives = 99/286 (34%), Gaps = 51/286 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--- 79 K+R+V++NI+ +R +++DADIVFLQE+ N Sbjct: 2 KLRVVTYNIH----------KGVKGFTGKPRIQSVRTGLQSMDADIVFLQEVQDRNDRLI 51 Query: 80 VAKVFPKNTWCIFY---STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 A++F + + Y + + + H A+ ++ ++ ++ + S Sbjct: 52 AAELFDPDHTQLNYLATDAYPHSVYGRNAVYDHGHHGNAILSRHPILMSENLDI-----S 106 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R R + + +ING + ++ +H F +Q L + + Sbjct: 107 DHRFEQRGLLHAVADINGVEAHLICVHFGLFAGS-------------RVRQTTALVERVR 153 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + P VIAGDFN + L + T++ +S K+ R + + Sbjct: 154 SVVPADAPLVIAGDFNDWNHKLDSK--ICNTLNAVESANA----KNGRIHTFPSHMPWWQ 207 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D E + + SDH P+ + Sbjct: 208 LDRIYARG-----------FEFERTQALTGREWAQRSDHVPLMAEL 242 >gi|323497693|ref|ZP_08102709.1| exonuclease III [Vibrio sinaloensis DSM 21326] gi|323317276|gb|EGA70271.1| exonuclease III [Vibrio sinaloensis DSM 21326] Length = 268 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 87/309 (28%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQAVIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K + Q +D R Sbjct: 42 -------FPIEDVEAMGYKVYFHGQKAHYGVAMLCKKEPISVQKGFPTDNEDHQK----R 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + NG+K+ +L+ F ++ Q + L ++ + Sbjct: 91 MIMVTVEDDNGEKVTILN-----GYFPQGDNISHETKYPYKRQFYKDLMTYLNDHHSNDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 V+ GD N ++ ++ KT+ + F + Sbjct: 146 QLVVMGDINISPLDADIGIGEPNRKRWLKTGKCSFQPEEREWLKTLLDWGFVDTFRQIHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + I+ + D ++ S Sbjct: 206 DANDRFSWFDYRSKGFPDNRGLRIDVVLATAKLAEKCIES-------DIDYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|284007473|emb|CBA72938.1| exodeoxyribonuclease III [Arsenophonus nasoniae] Length = 269 Score = 95.4 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 36/313 (11%), Positives = 83/313 (26%), Gaps = 79/313 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ VS+NIN+L + L + D++ LQE + Sbjct: 1 MKFVSFNINSL----------------RARIHQLEAIIEKHQPDVIGLQETKVDDNAFPL 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-NVRVLQQSYPLLGAKDSFSRA 140 + + + I H +A+ K +Q+ +P Sbjct: 45 EQLNQLGYHI------------CYHGQKAHYGVALFCKQKPITIQKGFP------GDDID 86 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + +E I +++ F + + ++ Q L+ ++ Sbjct: 87 AQRRIIMADIETEQGIITIIN-----GYFPQGECRDHPTKFAAKAKFYQDLQLYLQSNLS 141 Query: 201 SLVPFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPK 239 +I GD N ++ + + + + Sbjct: 142 PQSHIIIMGDMNISPTDHDIGIGEINRKRWLSAGKCSFLPEEREWMDKLKSWGLIDTYRQ 201 Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + + ID + + + + D + Sbjct: 202 QNPEITDQFSWFDYRSKGFVDNRGLRIDLILASSSLFACCGETGI-------DYDIRSME 254 Query: 291 RLSDHCPISIDYD 303 + SDH PI ++ Sbjct: 255 KPSDHAPIWAKFE 267 >gi|59801894|ref|YP_208606.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae FA 1090] gi|59718789|gb|AAW90194.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae FA 1090] Length = 256 Score = 95.4 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 87/304 (28%), Gaps = 73/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + DI+ LQE Sbjct: 1 MKITTWNVNSLN----------------VRLPQVQNLLVDNPPDILVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ ++V S R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRSVPQDVHF-----GLPSLPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V++++ + LDS + Y Q L +++ + Sbjct: 90 RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMSRHG 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D +++ + + Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWYEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ L D +R SDH P++ Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDV-------RIDLETRALERPSDHAPVA 251 Query: 300 IDYD 303 ++D Sbjct: 252 AEFD 255 >gi|323349895|gb|EGA84106.1| Ccr4p [Saccharomyces cerevisiae Lalvin QA23] Length = 843 Score = 95.4 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 40/327 (12%), Positives = 84/327 (25%), Gaps = 42/327 (12%) Query: 20 VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + ++S+N + + + L++ + D+D++ LQE+ S Sbjct: 507 AKRTFTVLSYNTLCQHYATPKMYRYTPSWALSWDYRRNKLKEQILSYDSDLLCLQEVESK 566 Query: 78 NAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 P + ++ R +DS I ++ +++ + Sbjct: 567 TFEEYWVPLLDKHGYTGIFHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDFSG 626 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-----DSLENTYSPSCSLLSQQA 188 + R L +N + + + + + + Q Sbjct: 627 AWMKHKKFQRTEDYLNRAMNKDNVALFLKLQHIPSGDTIWAVTTHLHWDPKFNDVKTFQV 686 Query: 189 QWLKDWITQKKESLV-----------PFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLI 235 L D + + P +I GDFN IN + I + Sbjct: 687 GVLLDHLETLLKEETSHNFRQDIKKFPVLICGDFNSYINSAVYELINTGRVQIHQEGNGR 746 Query: 236 RFPKEKDSRC-----------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277 F + N IDY + Sbjct: 747 DFGYMSEKNFSHNLALKSSYNCIGELPFTNFTPSFTDVIDYIWFSTHALRVRGLLGEVDP 806 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ K SDH P+ ++F Sbjct: 807 EYVSKFIGFPNDKFPSDHIPLLARFEF 833 >gi|110680357|ref|YP_683364.1| exodeoxyribonuclease III, putative [Roseobacter denitrificans OCh 114] gi|109456473|gb|ABG32678.1| exodeoxyribonuclease III, putative [Roseobacter denitrificans OCh 114] Length = 260 Score = 95.4 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 82/302 (27%), Gaps = 67/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + L + K D+ LQE+ S V + Sbjct: 1 MKIATFNING----------------IKARIDALPAWLKEAQPDVALLQEIKS---VDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + ++ +A+ K D +R Sbjct: 42 FPRTVF-------EDMGYNLETHGQKSFNGVAILSKLPLEDVTRGLPGDETDEQARY--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E V + + V ++L + + Y L D Sbjct: 92 --IEATVMGDTAPVRVCGLYLPNGNPAPGPKYDYKLD------WMARLYDRAKALLADET 143 Query: 204 PFVIAGDFNRKIN-------YLGNNDDFWKTIDP-------NDSLIRFPKEKDSRCNANK 249 FV+AGD+N D ++ N L + + Sbjct: 144 TFVMAGDYNIIPQAEDAAKPESWREDALFRLESRTAFRRLLNLGLTEAFRARTQGPGHYS 203 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A L+ D + SDH P+ + Sbjct: 204 FWDYQAGAWNRNNGIRIDHLLLSPQAADMLVDCQI-------DKEVRGRDKPSDHVPVWV 256 Query: 301 DY 302 D Sbjct: 257 DL 258 >gi|83647712|ref|YP_436147.1| endonuclease/exonuclease/phophatase family protein [Hahella chejuensis KCTC 2396] gi|83635755|gb|ABC31722.1| endonuclease/exonuclease/phophatase family protein [Hahella chejuensis KCTC 2396] Length = 445 Score = 95.4 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 96/290 (33%), Gaps = 27/290 (9%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + ++++++N L L K T++ + + K DA V QE+ Sbjct: 171 PQSNHLKVLTYNAWAL-------LPGLMSKNTSNRLATMAEAVKGYDA--VVFQEVFDPI 221 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 A+ Y TE + + + + + Q + + Sbjct: 222 LTARFRSDLQAEYPYLTEIPFKLGRLLTG-----GSFIASRWPIL-AQDAMVYEGCRNDG 275 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 ++ A ++ G+ + H ++ +L Q K ++ K Sbjct: 276 CFASKGANYAKIDKGGQIYHLFGAHTHAYTG--------EEDVALRRWHLQQYKAFVDSK 327 Query: 199 -KESLVPFVIAGDFN-RKINYLGNNDDFWKTIDPNDSLIR--FPKEKDSRCNANKNLRNK 254 + P +IAGD N K+N+ + D +D ++ + +P D N + + Sbjct: 328 GAAADEPVIIAGDLNVDKLNFPAEHQDMLAILDASEPPSQSQYPHSYDGGVNTFADSQLT 387 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +DY + + + + I LSDH P+ ++ F Sbjct: 388 EYLDYVLTSNSHVAPVYSHNRVRIPRFIQWEHWTSWDLSDHFPVEGEFVF 437 >gi|284040838|ref|YP_003390768.1| endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74] gi|283820131|gb|ADB41969.1| Endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74] Length = 1015 Score = 95.4 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 92/314 (29%), Gaps = 44/314 (14%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD--------YTLLRQYAKNLDADIVFLQE 73 Q + +VSWN+ G N + + +R +ADI LQE Sbjct: 530 QTLSVVSWNLEWYGFDGGSYTCTNGSRTYADNGPTNETLQAQNVRSVMDAFNADIYILQE 589 Query: 74 MGSYNAV-------AKVFPKNTWCIFYSTERLINHSKRDSNN----DIHTAIAVRKKNV- 121 + N + + + + ++ + + N + + + V Sbjct: 590 VSDKNLLVTNTPAGYALSCSDQYTSYFFQDLCDANGNPQGFNPTSLNQKVCVMYKTSVVS 649 Query: 122 ---------RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 + SY D+++ V ++G+ + + + + Sbjct: 650 MIPAESKPLLTDKYSYTTTPRSDAWASGRLPYLFVANVTVDGQTRKLYIVDIHAKSG--- 706 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL---GNNDDFWKTID 229 + + Q LK + V ++AGD+N ++ GN + + Sbjct: 707 ---SAQADYNRRKQDIIDLKAELDANYG-NVNLIMAGDYNDDVDQSIAAGNPSSYANFVS 762 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + + S CN + ID+ + + S + + Sbjct: 763 DPNYTVISSELSSSNCNT--DANFTDAIDHITVSNELASSYVAGSV---ASVRPAVVNYA 817 Query: 290 KRLSDHCPISIDYD 303 SDH P + Sbjct: 818 LTTSDHYPTFARFT 831 >gi|319426820|gb|ADV54894.1| exodeoxyribonuclease III [Shewanella putrefaciens 200] Length = 270 Score = 95.4 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 80/309 (25%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L S L+ + DI+ LQE ++ Sbjct: 1 MKIVSFNINGL----------------RSRLHQLQALIDSHKPDIIGLQETKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K Q G A R Sbjct: 42 -------FPLAEVEAMGYQVHYHGGKAHYGVAMLSKVAPQKIQK----GFPSDDEDAQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+ + V + F + + Q L ++ + Sbjct: 91 MIIGTFSQANGRPLTVFN-----GYFPQGESIDHPTKYPAKRKFYQDLMHYLQTNHSNDE 145 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 I GD N ++ KT+ + F + Sbjct: 146 DIAIIGDINISPTDLDIGIGEVNRKRWLKTGKCSFQPEEREWLKTLQDWGLIDTFRQLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 R + ID + + LI+ + D + S Sbjct: 206 ERTERYSWFDYRSKGFDDNRGLRIDVILATPSLAARLIES-------DVDYDLRGIDKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|256272261|gb|EEU07246.1| Ccr4p [Saccharomyces cerevisiae JAY291] Length = 834 Score = 95.4 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 40/327 (12%), Positives = 83/327 (25%), Gaps = 42/327 (12%) Query: 20 VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + ++S+N + + + L++ + D+D++ LQE+ S Sbjct: 498 AKRTFTVLSYNTLCQHYATPKMYRYTPSWALSWDYRRNKLKEQILSYDSDLLCLQEVESK 557 Query: 78 NAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 P + ++ R +DS I ++ +++ + Sbjct: 558 TFEEYWVPLLDKHGYTGIFHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDFSG 617 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-----DSLENTYSPSCSLLSQQA 188 + R L +N + + + + + + Q Sbjct: 618 AWMKHKKFQRTEDYLNRAMNKDNVALFLKLQHIPSGDTIWAVTTHLHWDPKFNDVKTFQV 677 Query: 189 QWLKDWITQKKESLV-----------PFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLI 235 L D + + P +I GDFN IN I + Sbjct: 678 GVLLDHLETLLKEETSHNFRQDIKKFPVLICGDFNSYINSAVYELISTGRVQIHQEGNGR 737 Query: 236 RFPKEKDSRC-----------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277 F + N IDY + Sbjct: 738 DFGYMSEKNFSHNLALKSSYNCIGELPFTNFTPSFTDVIDYIWFSTHALRVRGLLGEVDP 797 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ K SDH P+ ++F Sbjct: 798 EYVSKFIGFPNDKFPSDHIPLLARFEF 824 >gi|254498807|ref|ZP_05111518.1| conserved hypothetical protein [Legionella drancourtii LLAP12] gi|254351971|gb|EET10795.1| conserved hypothetical protein [Legionella drancourtii LLAP12] Length = 265 Score = 95.4 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 83/304 (27%), Gaps = 74/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +L SWN+N+L + + + D++ LQE K+ Sbjct: 9 FKLASWNVNSL----------------KIRLDQVLAWMETSQMDVLALQE-------TKL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 +N + + S + +A+ + R Sbjct: 46 LDENFPAAAF---IEKGYHIVYSGQKTYNGVAIISRYPITDV------MTDVPDLADPQR 96 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + V I ++D+++ + L S + Y Q + +I Q+ Sbjct: 97 RILAVTV----AGIRLIDLYVPNGSELTSDKYQYK------LHWLQKVTAFIQQQMSIYP 146 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 + GDFN +D + + F + + Sbjct: 147 KVAVVGDFNIAPEDRDVHDPLEWQDSVLVSPPEREAFAALLQLGLYDSFRNFVQAE-QSF 205 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ Q Q + R SDH P+ Sbjct: 206 SWWDYRAAGFRRNRGLRIDHVLLSQELNVLCRQSCIDVEPRKTE-------RPSDHAPVW 258 Query: 300 IDYD 303 ++ + Sbjct: 259 VELE 262 >gi|238061691|ref|ZP_04606400.1| hypothetical protein MCAG_02657 [Micromonospora sp. ATCC 39149] gi|237883502|gb|EEP72330.1| hypothetical protein MCAG_02657 [Micromonospora sp. ATCC 39149] Length = 457 Score = 95.4 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 30/291 (10%), Positives = 70/291 (24%), Gaps = 35/291 (12%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + A + ++++N+ S + +R+ D++ QE + Sbjct: 51 SPAAADLDVMTFNLRYASS--------SRPNSWAQRRPAMRELLTAEQPDLIGTQEGLAG 102 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + R + P + +++ Sbjct: 103 QLANIKQDLGSRYELIGVGREGGTRGEYMAIFYDNTRLQPLEQHHFWLSDTPEVVGSNTW 162 Query: 138 SRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R + + G +++ ++ HL ++ + L+ + L Sbjct: 163 GGGSIRMVTWVRFRDVVTGGQLYAVNTHL-----DNASALARERAAQLIRARLAALA--- 214 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-- 253 +P V+ GDFN D N + Sbjct: 215 -----PGLPIVLTGDFNSGPWAGSPVYDVLVRQAGLVDTWTAAAATGPAYGTYHNYQPLV 269 Query: 254 --KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ + + + G+ SDH P+ Sbjct: 270 AGGARIDWILATRGVTVSAAAIN--------TYGSGSGQFPSDHLPVQARL 312 >gi|163741419|ref|ZP_02148810.1| exodeoxyribonuclease III [Phaeobacter gallaeciensis 2.10] gi|161385153|gb|EDQ09531.1| exodeoxyribonuclease III [Phaeobacter gallaeciensis 2.10] Length = 268 Score = 95.4 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 88/306 (28%), Gaps = 65/306 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + L ++ D+V LQE+ S V + Sbjct: 1 MKIATFNING----------------IKARINALPEWLDEAQPDVVVLQEIKS---VDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + ++ +A+ K + D +R Sbjct: 42 FPRELF-------EDRGYNVETHGQKSFNGVAILSKLPLEDVRRGLPGDDSDEQARW--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCF---LDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +E V + + I + ++L + + + L+ Sbjct: 92 --IEATV-VGKQAIRICGLYLPNGNPVELDAEGRPVEGGKYAYKLAWMERLRQRAKDLLA 148 Query: 201 SLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 +P ++AGD+N + + ++ I F Sbjct: 149 EEMPALMAGDYNIIPQAEDAKTPDAWKDDALHRPESRAAFQRIVALGFTEAFRARHQGPG 208 Query: 246 NANKNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + N I ID+F++ A L D + SDH P Sbjct: 209 HYSFWDYQAGAWNRNNGIRIDHFLLSPQAADLLRDCQI-------DKDVRGRDKPSDHVP 261 Query: 298 ISIDYD 303 + +D D Sbjct: 262 VWVDLD 267 >gi|148277|gb|AAA24767.1| exonuclease III [Escherichia coli] Length = 268 Score = 95.4 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVANVGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSLLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + F Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRHANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + ++ D ++ S Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|325298496|ref|YP_004258413.1| Endonuclease/exonuclease/phosphatase [Bacteroides salanitronis DSM 18170] gi|324318049|gb|ADY35940.1| Endonuclease/exonuclease/phosphatase [Bacteroides salanitronis DSM 18170] Length = 341 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 39/342 (11%), Positives = 86/342 (25%), Gaps = 52/342 (15%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV-----------KRTTS 52 K + L + R++ +N+ L + SL ++ K+ Sbjct: 7 KIGVFLCLSVWSVCCFAQAPFRVMHYNVENLFDCRDDSLKQDEEFLPRAVRAWTWKKYHE 66 Query: 53 DYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108 T + + D+V L E+ + + + + + Sbjct: 67 KVTKIAKVILAASGEQVPDLVGLCEVENAYCLDGL---TKYSPLRDAAYRYVMTDSPDER 123 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSF 167 I A+ + R++ + + R R + + ++G + V H S Sbjct: 124 GIDVALLYQPATFRLIGTECIRVPSGQI-GRKPTRDILHVSGRVVSGDTLDVFVCHFPSR 182 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFW 225 S A L+ +I GDFN + ++ Sbjct: 183 SGG------ARQSAPHRLLAASVLRQAADSVSAVRRNPYLIIMGDFNDYPSSPSVSEALG 236 Query: 226 KTIDPNDSLI---RFPKEKDSRCNANKNLRNKIPIDYFVM-----DQNAYKFLIQESFS- 276 P + + + +D F++ ++ + Sbjct: 237 AKEVPRTDVSSSVLYNLMAGKAGGTYRYRGEWGMLDQFIVNGTMLSPSSALCTGADRARP 296 Query: 277 ---------------EILYNEDDIKSRGKRLSDHCPISIDYD 303 + + SDH PI +D Sbjct: 297 LAFPFLLEEDRQYGGDTPFRTYKGLRYYGGYSDHLPICLDIT 338 >gi|170690563|ref|ZP_02881730.1| Endonuclease/exonuclease/phosphatase [Burkholderia graminis C4D1M] gi|170144998|gb|EDT13159.1| Endonuclease/exonuclease/phosphatase [Burkholderia graminis C4D1M] Length = 258 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 83/281 (29%), Gaps = 56/281 (19%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + +R+V++NI+ +G + + L+AD+V LQE+ A Sbjct: 30 AGEPLRIVTYNIHGAVGTDG-----------KRSAARIAEVIAALNADVVALQEVPLGGA 78 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + + T D AV + ++ L SF Sbjct: 79 ASIDVLRELQDL---TGMHAVPGPTLDGPDRRFGNAVLTNLPVLAVRTLDL-----SFGS 130 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R A+++ ++ + ++ HL S Q + L + Sbjct: 131 REARGALDVDIDTGNGLMRIVATHLGL-------------SARERRAQVRLL---LEAFD 174 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 +P ++ GD N + RF + R ++ +D Sbjct: 175 TPDLPVILLGDLNEWFVWGWPLRALL---------TRFGRVAAPRTFPSRFPAF--ALDR 223 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + A ++ E D + SDH P+ Sbjct: 224 VWVHPAAR----------LVDIEVDRSRPARIASDHLPLVA 254 >gi|293367572|ref|ZP_06614225.1| phospholipase C [Staphylococcus epidermidis M23864:W2(grey)] gi|291318285|gb|EFE58678.1| phospholipase C [Staphylococcus epidermidis M23864:W2(grey)] Length = 334 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 42/301 (13%), Positives = 98/301 (32%), Gaps = 33/301 (10%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +++ + N+ L +++ N + +D Y + + D+V L E+ A Sbjct: 40 SKDSLKITTHNVYFLPT----AIYPNWGQSQRADLISKADYIQ--NQDVVILNELFDKKA 93 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLL 131 ++ + Y T + ++ N + + K V Q+ + + Sbjct: 94 SNRLLTRLHSQYPYQTPIVGKGTEGWQNTSGTYRKIKKVSGDVGIVSKWPIVQQEQH-IY 152 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 AGN+ + + NGK ++ HL++ + + Q + Sbjct: 153 KKGCGADMAGNKGFAYIKINKNGKYHHIIGTHLQA----EDPTCFKGKDKDIRQSQMNEI 208 Query: 192 KDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 K +I + P I GD N I ++ + ++N Sbjct: 209 KQFIKDKNIPKNEPVYIGGDLNV-IKDSDEYQQMANNLNVSLPTQFDGNAYSWDTSSNSI 267 Query: 251 LRN------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPI 298 + +DY ++D++ + + + + + + + SDH P+ Sbjct: 268 AKYNYPKLEPQHLDYILLDRDHAQPSSWHNDTHRVKSPEWSVKSWGKTYKYNDYSDHYPL 327 Query: 299 S 299 S Sbjct: 328 S 328 >gi|167753483|ref|ZP_02425610.1| hypothetical protein ALIPUT_01757 [Alistipes putredinis DSM 17216] gi|167658108|gb|EDS02238.1| hypothetical protein ALIPUT_01757 [Alistipes putredinis DSM 17216] Length = 345 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 41/349 (11%), Positives = 90/349 (25%), Gaps = 57/349 (16%) Query: 1 MIRKYVLA-LVFFLVPCTASVAQKVRLVSWNINTLSE-------QEGVSLWKNSVKRTTS 52 M ++ + L+ L + ++V +N+ + + + K + Sbjct: 1 MKKRLIFTGLLALLFAACCFAQKPYKVVFYNLENFFDTINDPEVNDDEFTPEGPKKWNSV 60 Query: 53 DY-------TLLRQYAKNLDAD---IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS 102 Y + +D D ++ + E+ + + + + I+H Sbjct: 61 KYAKKLGNTEKVLFDIAGIDKDYPIVIGVSEVENRSVLEDIIATPKMAP---GNYRISHY 117 Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 + A R ++ + P+ S R + I+G+ + + Sbjct: 118 DSPEARGVDVAFMYRPDVFKLEGSA-PIRTQIPSLPNFKTRDISTMWGTIDGEPFFFMVA 176 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 H S + +Q + + D + + + V GDFN + Sbjct: 177 HWPSRLGGKDASEFKRIAV---GEQMRRIADSVLKVNPATK-IVAMGDFNDDPTDQSMLE 232 Query: 223 DFW-----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF-------- 269 K + P D F + D V+ +N Sbjct: 233 GLGAKPKTKELQPGDFFSPFHAVLRAGMGTLAYGDAWNLFDNIVVSENLVNAKPGELRLV 292 Query: 270 ------------------LIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + F + SDH P+ I Sbjct: 293 RAPGSKYYGNVFKRNYMIQREGQFKGYPLRTYVGNNFQGGYSDHFPVYI 341 >gi|151941371|gb|EDN59742.1| CCR4-NOT transcriptional complex subunit [Saccharomyces cerevisiae YJM789] Length = 835 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 40/327 (12%), Positives = 83/327 (25%), Gaps = 42/327 (12%) Query: 20 VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + ++S+N + + + L++ + D+D++ LQE+ S Sbjct: 499 AKRTFTVLSYNTLCQHYATPKMYRYTPSWALSWDYRRNKLKEQILSYDSDLLCLQEVESK 558 Query: 78 NAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 P + ++ R +DS I ++ +++ + Sbjct: 559 TFEEYWVPLLDKHGYTGIFHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDFSG 618 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-----DSLENTYSPSCSLLSQQA 188 + R L +N + + + + + + Q Sbjct: 619 AWMKHKKFQRTEDYLNRAMNKDNVALFLKLQHIPSGDTIWAVTTHLHWDPKFNDVKTFQV 678 Query: 189 QWLKDWITQKKESLV-----------PFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLI 235 L D + + P +I GDFN IN I + Sbjct: 679 GVLLDHLETLLKEETSHNFRQDIKKFPVLICGDFNSYINSAVYELISTGRVQIHQEGNGR 738 Query: 236 RFPKEKDSRC-----------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277 F + N IDY + Sbjct: 739 DFGYMSEKNFSHNLALKSSYNCIGELPFTNFTPSFTDVIDYIWFSTHALRVRGLLGEVDP 798 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ K SDH P+ ++F Sbjct: 799 EYVSKFIGFPNDKFPSDHIPLLARFEF 825 >gi|313682984|ref|YP_004060722.1| endonuclease/exonuclease/phosphatase [Sulfuricurvum kujiense DSM 16994] gi|313155844|gb|ADR34522.1| Endonuclease/exonuclease/phosphatase [Sulfuricurvum kujiense DSM 16994] Length = 335 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 46/360 (12%), Positives = 102/360 (28%), Gaps = 85/360 (23%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSL----------WKNSVKRT 50 M ++LAL+ + +V++ ++N+ L + W + + Sbjct: 1 MRILFLLALILSFLGGV-----EVKIATYNVENLFDMHYDGTEYEEYIPNGDWGWTNEMY 55 Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 + + + ADI+ LQE+ S +A+ + + Y ++ + Sbjct: 56 RAKLINTATVIRGIGADIIGLQEIESESALKDLKAEINRQGLYYPYYAFAKTR-----NS 110 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 +A+ + +P+ + R +E + I K + V H KS Sbjct: 111 AVNVALLSRYPIQSALKHPVNYSG------KYRDILEAKILIEEKPLRVFVNHWKSKGGP 164 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 +S A+ L + + P+V+ GDFN K + Sbjct: 165 ESE----------RIVCAKRLLQRLNE-LPEDEPYVLVGDFNSHYEEHKTFLKSRKHNNT 213 Query: 231 ND-----------------------------SLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 + + + + +++ + +D + Sbjct: 214 DGITGINHILGTVNKEGNPITYTALKNTQGVRYNLWYELDKEKRWSHQFRGHGEGLDNII 273 Query: 262 MDQNAYK-------------------FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + Q F + + G+ SDH PI + Sbjct: 274 ISQALADGIGIDYIEGSFDRYTPDYLFAKGKVYRWQQSRRYPKHHLGEGYSDHLPIYARF 333 >gi|295132909|ref|YP_003583585.1| hypothetical protein ZPR_1044 [Zunongwangia profunda SM-A87] gi|294980924|gb|ADF51389.1| probable secreted protein [Zunongwangia profunda SM-A87] Length = 282 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 53/307 (17%), Positives = 89/307 (28%), Gaps = 55/307 (17%) Query: 2 IRKYVLALVFFLVPCTASVAQKVR----LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 I+ L L+FF V A + VR ++S+NI+ + + + + Sbjct: 21 IKSAFLILLFFNVIYKAHSQKLVRSEVIVLSYNIHHANPPSQSEV---------INLDTI 71 Query: 58 RQYAKNLDADIVFLQEMGSYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 KN ADIV LQE+ Y + K + SK + A+ Sbjct: 72 ATIIKNSKADIVGLQEVDIYTERSGKKLNMAKVLAEKAGFEYWYFSKSINFQGGEYGTAI 131 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLEN 175 K + L K A R + IN K +I + + HL ++ Sbjct: 132 LSKFPLSDTITTKLPNPK----NAEPRTLSLANIHINPKLEIKIANTHLDYTDASNN--- 184 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 Q ++ ++ P +I GDFN N + Sbjct: 185 ---------LAQVSAIRKILS---SEDKPVIITGDFNVVPESSSMNHLLEIFSSSCTDVC 232 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 F IDY + + + + + SDH Sbjct: 233 DFTSSAQQSE---------STIDYILY--------KSNTIDVLEHKVL----KETFASDH 271 Query: 296 CPISIDY 302 P+ + Sbjct: 272 FPVKARF 278 >gi|302346863|ref|YP_003815161.1| endonuclease/exonuclease/phosphatase family protein [Prevotella melaninogenica ATCC 25845] gi|302151144|gb|ADK97405.1| endonuclease/exonuclease/phosphatase family protein [Prevotella melaninogenica ATCC 25845] Length = 347 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 45/352 (12%), Positives = 100/352 (28%), Gaps = 64/352 (18%) Query: 2 IRKYVLALVFFLVPCTASVAQK-VRL---VSWNINTLSEQEGVSLWKN-----------S 46 +RK +L L ++ T++ AQK + +N+ L + + + Sbjct: 1 MRKLLLVLFCAVLFGTSASAQKKFSVYAIGFYNVENLFDTTHDEGKNDHDFTPTGSYQWN 60 Query: 47 VKRTTSDYTLLRQYAKNLDADI--------VFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + + + + D+ + L E+ + + + + + Sbjct: 61 EMKYSHKLHNMASVLAEMGTDVLPNIGCAAIGLAEVENDHVMDDL---TSQPELAKRGYK 117 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 H + + I A+ K V P + S R + + + G+ + Sbjct: 118 YVHIEGPDHRGIDCALIYNPKLFTVRNTKLVPYVYDLPKDSTRATRGFLTVSGTLAGEHV 177 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 ++ HL S Q + LKD + +++ V ++ GD N Sbjct: 178 TIVVCHLPSRGAGSYYRELGGK-------QVKALKDSL-LREDPKVKVLVMGDMNDDPTN 229 Query: 218 LGNNDDFWKTID------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 + + + + + D +M N Sbjct: 230 KSMYECLSAKGEINEVGADDMYNPWYNVLVKEGTGTLQYQGKWNLFDQIIMTPNLLNKDG 289 Query: 272 QESFSEILYNEDDIKSRGK-----------------------RLSDHCPISI 300 ++ FSE+ + ++ I R SDH P+ Sbjct: 290 KKDFSELKFWKNQIFRRDYLFQESGKYKGNTKRTTAGGVWLDGYSDHLPVVA 341 >gi|76810233|ref|YP_334150.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710b] gi|76579686|gb|ABA49161.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710b] Length = 322 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 82/303 (27%), Gaps = 68/303 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+ +WN+N+L+ + + D D++ LQE Sbjct: 64 PMRIATWNVNSLN----------------VRKQHVLDWLAQSDVDVLCLQE--------- 98 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + +A+ + S P + G Sbjct: 99 -LKIPDEKFPREALEAAGYRSWFAGQKTYNGVAILAR------ASLPFDETDIVRNIPGF 151 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 A + L+ + ++ + + LDS + Y Q L+ W+ + + Sbjct: 152 EDAQQRLIAATIDGVRIVSAYFPNGQALDSDKFVYK------MQWLDALQAWLKDELQRY 205 Query: 203 VPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNAN 248 + GD+N +D + P + + + Sbjct: 206 PKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLVALGFVDAFRRFEQPEKTF 265 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ++ ID+ ++ + + D + ++ SDH P+ Sbjct: 266 TWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTV-------DRVPRTWEQPSDHTPVV 318 Query: 300 IDY 302 Sbjct: 319 AQL 321 >gi|269138847|ref|YP_003295548.1| exonuclease III [Edwardsiella tarda EIB202] gi|267984508|gb|ACY84337.1| exonuclease III [Edwardsiella tarda EIB202] gi|304558837|gb|ADM41501.1| Exodeoxyribonuclease III [Edwardsiella tarda FL6-60] Length = 269 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 77/309 (24%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +S+NIN L + L + D++ LQE + Sbjct: 1 MKFISFNINGL----------------RARPHQLAAIVEKHSPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + H +A+ + + + R Sbjct: 42 FP-------LQDLAQLGYHLHYHGQKGHYGVALLTRMAPLAVRK-----GFPGDDAEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + S+ L+ ++ Sbjct: 90 RIIMADIPTELGTLTVIN-----GYFPQGESRDHPIKFPAKSKFYADLQRYLQDALSPQN 144 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N ++L ++ + + + + Sbjct: 145 PVLIMGDMNITPRDIDIGIGEDSRRRWLRSGKCSFLPEEREWLDRLLAWGLVDTYRQANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + ID + Q + D ++ S Sbjct: 205 QGDERFSWFDYRSKGFDDNRGLRIDLLLASQPLAQRCTDTGI-------DYAIRAMEKPS 257 Query: 294 DHCPISIDY 302 DH PI ++ Sbjct: 258 DHAPIWAEF 266 >gi|110598414|ref|ZP_01386686.1| Endonuclease/exonuclease/phosphatase [Chlorobium ferrooxidans DSM 13031] gi|110339948|gb|EAT58451.1| Endonuclease/exonuclease/phosphatase [Chlorobium ferrooxidans DSM 13031] Length = 339 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 40/344 (11%), Positives = 90/344 (26%), Gaps = 60/344 (17%) Query: 5 YVLALVFFLVPCTASVA----QKVRLVSWNINTLSE-------QEGVSLWKNSVKRTTSD 53 +++++ PC A+ A +++ L+ WNI L + + + S T Sbjct: 9 FLVSMALSWSPCHAAGAPSGRKEIVLLWWNIENLFDTHDDPVTDDDEFTPQGSRNWTAKK 68 Query: 54 Y----TLLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH 101 +R ++ DIV E+ + + + + Sbjct: 69 LLLKEMRIRHTLMAVEAHPDYGKFPDIVAFAEVENRQVFQQTLSGLPGITYKTVYYDSP- 127 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 I +A K V + + R+ + +G ++ Sbjct: 128 ----DPRGIDIGLAYNPKGVTLKASR----AYSVTLDEKPTRKIIIAEFSDSGDSFHLIL 179 Query: 162 IHLKSFCFLDSLEN-TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 H S F + + L+ + GDFN + Sbjct: 180 NHWPSRAFDTGWSEPKRLAAAKVTRHILDSLR-----SSNPTADIITMGDFNDEPANRSL 234 Query: 221 NDDFWKTIDPN------DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF----L 270 ++ + D +L+ + R ID ++ + Sbjct: 235 SEGLGSSFDAAQVRRNSKTLLYNCWSGYQGIGSYYYHRKWERIDQILLSAGMLDKEGFSV 294 Query: 271 IQESFSEILYN------------EDDIKSRGKRLSDHCPISIDY 302 + F ++ + + SDH P+ + Sbjct: 295 SGDPFRCFTFSRMLLYPDNKPWPTYEKREYRGGYSDHLPLLLKI 338 >gi|16129703|ref|NP_416263.1| exonuclease III [Escherichia coli str. K-12 substr. MG1655] gi|74311932|ref|YP_310351.1| exonuclease III [Shigella sonnei Ss046] gi|82543848|ref|YP_407795.1| exonuclease III [Shigella boydii Sb227] gi|89108588|ref|AP_002368.1| exonuclease III [Escherichia coli str. K-12 substr. W3110] gi|157157800|ref|YP_001463047.1| exonuclease III [Escherichia coli E24377A] gi|157161211|ref|YP_001458529.1| exonuclease III [Escherichia coli HS] gi|170081406|ref|YP_001730726.1| exonuclease III [Escherichia coli str. K-12 substr. DH10B] gi|187730490|ref|YP_001880544.1| exonuclease III [Shigella boydii CDC 3083-94] gi|188495310|ref|ZP_03002580.1| exodeoxyribonuclease III [Escherichia coli 53638] gi|191169042|ref|ZP_03030806.1| exodeoxyribonuclease III [Escherichia coli B7A] gi|193065803|ref|ZP_03046866.1| exodeoxyribonuclease III [Escherichia coli E22] gi|193068936|ref|ZP_03049895.1| exodeoxyribonuclease III [Escherichia coli E110019] gi|194428570|ref|ZP_03061109.1| exodeoxyribonuclease III [Escherichia coli B171] gi|194438505|ref|ZP_03070594.1| exodeoxyribonuclease III [Escherichia coli 101-1] gi|209919111|ref|YP_002293195.1| exonuclease III [Escherichia coli SE11] gi|218554315|ref|YP_002387228.1| exonuclease III [Escherichia coli IAI1] gi|238900963|ref|YP_002926759.1| exonuclease III [Escherichia coli BW2952] gi|254161808|ref|YP_003044916.1| exonuclease III [Escherichia coli B str. REL606] gi|256018057|ref|ZP_05431922.1| exonuclease III [Shigella sp. D9] gi|256022587|ref|ZP_05436452.1| exonuclease III [Escherichia sp. 4_1_40B] gi|260844099|ref|YP_003221877.1| exonuclease III [Escherichia coli O103:H2 str. 12009] gi|260855614|ref|YP_003229505.1| exonuclease III [Escherichia coli O26:H11 str. 11368] gi|260868274|ref|YP_003234676.1| exonuclease III [Escherichia coli O111:H- str. 11128] gi|293446121|ref|ZP_06662543.1| exodeoxyribonuclease III [Escherichia coli B088] gi|297518661|ref|ZP_06937047.1| exonuclease III [Escherichia coli OP50] gi|301020970|ref|ZP_07185022.1| exodeoxyribonuclease III [Escherichia coli MS 196-1] gi|307138408|ref|ZP_07497764.1| exonuclease III [Escherichia coli H736] gi|307310679|ref|ZP_07590325.1| exodeoxyribonuclease III [Escherichia coli W] gi|312969777|ref|ZP_07783960.1| exodeoxyribonuclease III [Escherichia coli 1827-70] gi|332279097|ref|ZP_08391510.1| exonuclease III [Shigella sp. D9] gi|2506193|sp|P09030|EX3_ECOLI RecName: Full=Exodeoxyribonuclease III; Short=EXO III; Short=Exonuclease III; AltName: Full=AP endonuclease VI gi|157829928|pdb|1AKO|A Chain A, Exonuclease Iii From Escherichia Coli gi|43312|emb|CAA31424.1| exonuclease III [Escherichia coli K-12] gi|1742858|dbj|BAA15540.1| exonuclease III [Escherichia coli str. K12 substr. W3110] gi|1788046|gb|AAC74819.1| exonuclease III [Escherichia coli str. K-12 substr. MG1655] gi|73855409|gb|AAZ88116.1| exonuclease III [Shigella sonnei Ss046] gi|81245259|gb|ABB65967.1| exonuclease III [Shigella boydii Sb227] gi|157066891|gb|ABV06146.1| exodeoxyribonuclease III [Escherichia coli HS] gi|157079830|gb|ABV19538.1| exodeoxyribonuclease III [Escherichia coli E24377A] gi|169889241|gb|ACB02948.1| exonuclease III [Escherichia coli str. K-12 substr. DH10B] gi|187427482|gb|ACD06756.1| exodeoxyribonuclease III [Shigella boydii CDC 3083-94] gi|188490509|gb|EDU65612.1| exodeoxyribonuclease III [Escherichia coli 53638] gi|190900924|gb|EDV60709.1| exodeoxyribonuclease III [Escherichia coli B7A] gi|192926575|gb|EDV81206.1| exodeoxyribonuclease III [Escherichia coli E22] gi|192957731|gb|EDV88175.1| exodeoxyribonuclease III [Escherichia coli E110019] gi|194413448|gb|EDX29731.1| exodeoxyribonuclease III [Escherichia coli B171] gi|194422515|gb|EDX38513.1| exodeoxyribonuclease III [Escherichia coli 101-1] gi|209912370|dbj|BAG77444.1| exonuclease III [Escherichia coli SE11] gi|218361083|emb|CAQ98666.1| exonuclease III [Escherichia coli IAI1] gi|238861051|gb|ACR63049.1| exonuclease III [Escherichia coli BW2952] gi|242377470|emb|CAQ32223.1| exonuclease III [Escherichia coli BL21(DE3)] gi|253973709|gb|ACT39380.1| exonuclease III [Escherichia coli B str. REL606] gi|253977903|gb|ACT43573.1| exonuclease III [Escherichia coli BL21(DE3)] gi|257754263|dbj|BAI25765.1| exonuclease III [Escherichia coli O26:H11 str. 11368] gi|257759246|dbj|BAI30743.1| exonuclease III [Escherichia coli O103:H2 str. 12009] gi|257764630|dbj|BAI36125.1| exonuclease III [Escherichia coli O111:H- str. 11128] gi|291322951|gb|EFE62379.1| exodeoxyribonuclease III [Escherichia coli B088] gi|299881725|gb|EFI89936.1| exodeoxyribonuclease III [Escherichia coli MS 196-1] gi|306908857|gb|EFN39353.1| exodeoxyribonuclease III [Escherichia coli W] gi|309701971|emb|CBJ01285.1| exodeoxyribonuclease III [Escherichia coli ETEC H10407] gi|310338062|gb|EFQ03151.1| exodeoxyribonuclease III [Escherichia coli 1827-70] gi|320173600|gb|EFW48793.1| Exodeoxyribonuclease III [Shigella dysenteriae CDC 74-1112] gi|320184212|gb|EFW59027.1| Exodeoxyribonuclease III [Shigella flexneri CDC 796-83] gi|320197933|gb|EFW72541.1| Exodeoxyribonuclease III [Escherichia coli EC4100B] gi|323153006|gb|EFZ39275.1| exodeoxyribonuclease III [Escherichia coli EPECa14] gi|323158544|gb|EFZ44559.1| exodeoxyribonuclease III [Escherichia coli E128010] gi|323166246|gb|EFZ52021.1| exodeoxyribonuclease III [Shigella sonnei 53G] gi|323175176|gb|EFZ60790.1| exodeoxyribonuclease III [Escherichia coli LT-68] gi|323180528|gb|EFZ66073.1| exodeoxyribonuclease III [Escherichia coli 1180] gi|323186233|gb|EFZ71585.1| exodeoxyribonuclease III [Escherichia coli 1357] gi|323378375|gb|ADX50643.1| exodeoxyribonuclease III [Escherichia coli KO11] gi|323937007|gb|EGB33287.1| exodeoxyribonuclease III [Escherichia coli E1520] gi|323940585|gb|EGB36776.1| exodeoxyribonuclease III [Escherichia coli E482] gi|323962060|gb|EGB57657.1| exodeoxyribonuclease III [Escherichia coli H489] gi|323974008|gb|EGB69179.1| exodeoxyribonuclease III [Escherichia coli TA007] gi|332096300|gb|EGJ01301.1| exodeoxyribonuclease III [Shigella boydii 3594-74] gi|332101449|gb|EGJ04795.1| exonuclease III [Shigella sp. D9] gi|332343470|gb|AEE56804.1| exodeoxyribonuclease III [Escherichia coli UMNK88] Length = 268 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSLLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + F Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRHANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + ++ D ++ S Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|170701595|ref|ZP_02892542.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria IOP40-10] gi|170133507|gb|EDT01888.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria IOP40-10] Length = 269 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 50/286 (17%), Positives = 88/286 (30%), Gaps = 56/286 (19%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P A + +R+ ++NI K T + Q LDAD++ LQE+ Sbjct: 20 PPAAPGGRDLRIATYNIRG-----------GYGKWHTRAAHRIAQVIHELDADVIALQEV 68 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 P + +T + AV + ++ L Sbjct: 69 PLGGTH---APDVLAHLRDATGMHAVAGPTIDTPERRYGNAVLSRCPIRAARTLDL---- 121 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 SF + R A++ ++ + I V+ HL S S S Q Q L Sbjct: 122 -SFHQREPRGALDADIDCSAGMIRVVATHLGL-------------SASERSAQVQRL--- 164 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + +P ++ GD N + F + + RF + R Sbjct: 165 LAAFDTGAMPVILMGDIN---------EWFVRGRALQALVTRFRRAPAPRTFPTLYPVFS 215 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +D + ++L+ + R +R SDH P+ Sbjct: 216 --LDRIWIHPG--EWLVDVNVH--------RSMRARRASDHYPLVA 249 >gi|262037433|ref|ZP_06010897.1| lpxtg cell wall surface protein [Leptotrichia goodfellowii F0264] gi|261748595|gb|EEY35970.1| lpxtg cell wall surface protein [Leptotrichia goodfellowii F0264] Length = 598 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 94/323 (29%), Gaps = 62/323 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +VS+NI S +G +R + + DI+ L E+G + K Sbjct: 291 LNVVSYNIENFSHVDG-------PERVKELANQVATVLQT--PDILGLIEVGDDDGQKKS 341 Query: 84 FPKNTW-----------------CIFYSTERLINHSKRDSNNDIHTAIAVRKKNV----- 121 + + I I RK V Sbjct: 342 EVVTAKNNVEAIVNAIKEKTGIDYGYMTVNPTDGKDGGWPEMHIRNVILYRKDRVKPVKF 401 Query: 122 ----------------RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 +V P + R+ V E NG+ ++VL HLK Sbjct: 402 NQGNSQKDTEVIKKGNKVQLTYNPGRIGNNDEIWTDVRKPVIAQFEFNGQNLFVLANHLK 461 Query: 166 SFCFLDSLENTY----SPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLG 219 S F + + T S + + Q + + +++ + ++ GD N Sbjct: 462 SKRFDEKIYGTSHPVIRKSEEVRNPQGKQINNFVKNILNNDPKATVIVLGDMNDF----- 516 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 K I+ ++ + + + + +D ++++ + + Sbjct: 517 EFSQTIKNINGDELIDTISELPVNERYSYVYQGASQTLDNIMINKKYKGQVNVDVIRINS 576 Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302 D S SDH P+ I + Sbjct: 577 EFTIDQGS----FSDHDPVFIQF 595 >gi|261252552|ref|ZP_05945125.1| exodeoxyribonuclease III [Vibrio orientalis CIP 102891] gi|260935943|gb|EEX91932.1| exodeoxyribonuclease III [Vibrio orientalis CIP 102891] Length = 268 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 85/309 (27%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQAVIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K + Q +D R Sbjct: 42 -------FPLEDVEAMGYKVYFHGQKAHYGVAMLCKKEPLSVQKGFPTDNEDHQK----R 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + L + NG+K+ VL+ F + Q L ++ + Sbjct: 91 MIMVTLEDDNGEKVTVLN-----GYFPQGDNIGHETKFPYKRQFYSDLMTYLNDHHSNDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ ++ KT+ + F + Sbjct: 146 QLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSFQPEEREWLKTLLDWGFVDTFRQIHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + I+ + D ++ S Sbjct: 206 DVNDRFSWFDYRSKGFPDNRGLRIDVVLATPKLAEKCIES-------DVDYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|242023120|ref|XP_002431984.1| protein angel, putative [Pediculus humanus corporis] gi|212517335|gb|EEB19246.1| protein angel, putative [Pediculus humanus corporis] Length = 354 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 44/284 (15%), Positives = 92/284 (32%), Gaps = 18/284 (6%) Query: 24 VRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +RL+ WNI TL + + + Q D D++ L+E+ + + Sbjct: 70 LRLLQWNILSQTLGVSNDNFVKTPPESLDWSLKRFYVLQEIIQNDPDVICLEEVDHFKFL 129 Query: 81 AKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + + +N A+ + V++ +L S Sbjct: 130 ESALKSIGYSGKFFPKPDSPCVYVEGNNGSDGAAMFYKTSKYEVIKWETRILEVWHVQSN 189 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 ++ L + +G + V HLK+ + +L Q + L W+ + Sbjct: 190 QVGLSSI-LKDKESGIEFCVAVTHLKAK--------AGALLATLRDHQGRDLLTWLEK-I 239 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 P +I GDFN + + +D + +E + IDY Sbjct: 240 SGGRPIIIGGDFNAEPSEPVYRTMTDNRLDLKSAYSVNGREPPYTTWKGEI---CHTIDY 296 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + + + + I S SDH + +D++ Sbjct: 297 VFHSKHFIPLRLLDFPTGKTIGPERIPSLSY-PSDHFSLVVDFE 339 >gi|304413776|ref|ZP_07395220.1| exonuclease III [Candidatus Regiella insecticola LSR1] gi|304283867|gb|EFL92261.1| exonuclease III [Candidatus Regiella insecticola LSR1] Length = 271 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 79/309 (25%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L DI+ LQE ++ + + Sbjct: 1 MKFVSFNINGLRAH----------------FHQLAAIITQHQPDIIGLQETKVHDDMFPL 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K + + D+ R Sbjct: 45 AEISQY----------GYHIYYHGQKGHYGVALLIKQQPLAVRRGFPTDDADA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + V + V++ F + ++ L+ ++ Q Sbjct: 90 RIIMVDVATPQGNLTVIN-----GYFPQGENRNHPTKFPAKAKFYSDLQHYLEQHFTPDD 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 +I GD N L D+ + + F + Sbjct: 145 QLLIMGDLNICPTELDIGIGSDNQKRWLRSGKCAFLPEERDWLARLQNWGLIDTFRSKNP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + I D ++ S Sbjct: 205 ECNDQFSWFDYRSRGFDENRGLRIDLLLASAPLASRCIATGI-------DYQIRGMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ ++ Sbjct: 258 DHAPVWSEF 266 >gi|293189928|ref|ZP_06608608.1| exodeoxyribonuclease III [Actinomyces odontolyticus F0309] gi|292821147|gb|EFF80094.1| exodeoxyribonuclease III [Actinomyces odontolyticus F0309] Length = 275 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 33/306 (10%), Positives = 81/306 (26%), Gaps = 58/306 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + + + N+N + + + + D D++ +QE+ + +++ Sbjct: 2 TLTVTTVNLNGIRA---------------AHKRGFLDWLEASDTDVLLMQEVRAPEEISR 46 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 W + R+ + +AVR+ + + +L ++ +G Sbjct: 47 EIMGEAWESVWVPCRIKGRAG--------VGVAVRRGRAVLEGEPRLILDEAETDVDSGR 98 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + E + V+ + S + + + L I ++ Sbjct: 99 WLEAVVRPEGGDTPVRVVSAYFHSGEKDTPKQEAKMAHLPRIGARMAEL---IAEEAGGG 155 Query: 203 VPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCN 246 + ++ GDFN + + F Sbjct: 156 ISSLVCGDFNVVRSEADIKNWKPNHNKRAGVLDEEIAFLNRWVEEGWRDTVRDLAGDVQG 215 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDY + + +R SDH P Sbjct: 216 PYSWWSWRGQAFVNNAGWRIDYQYATPALGERARS-------FEIGRADEYAERFSDHAP 268 Query: 298 ISIDYD 303 +S+ Y+ Sbjct: 269 VSVTYE 274 >gi|163843144|ref|YP_001627548.1| exodeoxyribonuclease III (xth) [Brucella suis ATCC 23445] gi|163673867|gb|ABY37978.1| exodeoxyribonuclease III (xth) [Brucella suis ATCC 23445] Length = 260 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 87/302 (28%), Gaps = 67/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + L+ + + DIV LQE+ S + Sbjct: 1 MKIATWNING----------------VKARIDNLQHWLRESSPDIVCLQEIKSVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ K D +R Sbjct: 41 ------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKDLPGDDSDEQARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + + + V+ ++L + +D+ + Y S Q L++W ++ Sbjct: 92 --IEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQRLENWAKKRLTLEE 143 Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIRFPKEKDSRCNANK 249 P V+AGD+N + + N + Sbjct: 144 PLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRASTDESGVYS 203 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A I + + + ++ SDH P+++ Sbjct: 204 FWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------RAWEKPSDHVPVTV 256 Query: 301 DY 302 Sbjct: 257 TL 258 >gi|114570470|ref|YP_757150.1| exodeoxyribonuclease III [Maricaulis maris MCS10] gi|114340932|gb|ABI66212.1| Exodeoxyribonuclease III [Maricaulis maris MCS10] Length = 262 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 83/305 (27%), Gaps = 69/305 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + + SWN+N + + + D+ LQE+ + V + Sbjct: 2 TLTVASWNVN----------------SVKARLPNVLDWLSEAKPDVACLQEIKT---VDE 42 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP+ + ++ + +A+ K+ + D +R Sbjct: 43 GFPRME-------IEDLGYNIETHGQKSYNGVAILSKHPIEELRCGLPGDESDEQARY-- 93 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +E ++ G + V I+L + + Y + + L+ Sbjct: 94 ---IEAVIAAEGGPVRVASIYLPNGNPAPGPKYDYKLA------WMERLRRHAQNLLTFE 144 Query: 203 VPFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++AGD+N ++ + F + D R + Sbjct: 145 EPLILAGDYNCIPRDSDCWDIAEWESDALALPQTRAAFRALKWLGLTEAFEQL-DGRGHQ 203 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ + A L ++ SDH PI Sbjct: 204 YTFYDYQAGRWNKGHGIRIDHLLCSPQAADHLEGIEIHTKT-------RGKEKASDHIPI 256 Query: 299 SIDYD 303 + Sbjct: 257 VGSFS 261 >gi|251791676|ref|YP_003006397.1| Endonuclease/exonuclease/phosphatase [Dickeya zeae Ech1591] gi|247540297|gb|ACT08918.1| Endonuclease/exonuclease/phosphatase [Dickeya zeae Ech1591] Length = 287 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 38/312 (12%), Positives = 85/312 (27%), Gaps = 63/312 (20%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----------G 75 +VS+NI ++G D + + ADI+ +QE+ Sbjct: 3 IVSYNIQYGLGRDG-----------RYDLARIADEVR--GADIICMQEVERFWQRSGMTD 49 Query: 76 SYNAVAKVFPKNTWCIFYSTERLIN---HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 +A + + W + + R N + + +++PL Sbjct: 50 QPAELAALLGEYHWVYGANLDMDAGTVSSDGRVVNRRRQFGTLTLSRRPILSSRNFPLPK 109 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + + +E +++ G I V + HL C ++L A+ Sbjct: 110 FGTLTQHSIQQGVLETVIDTGGGAIRVYNTHLSHLCAGT----RLPQVDAMLGIFARAPD 165 Query: 193 DWITQKKESLVP---------------FVIAGDFNRKINYLGNNDDFWKT------IDPN 231 + P ++ GD N + + + + Sbjct: 166 EGGAWCGGHPDPNSGWTEGLMPLMPQEMILMGDLNCLPDSEEYSRLVGPVSPHHGRLVRH 225 Query: 232 DSLIRFPKEKDSRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 L+ N+ ID+ ++ + + Sbjct: 226 RGLMDAWVAAGQPENSGSTHPAVGGRIDHCLLTPLLGLTVRRCWVDIEN----------- 274 Query: 291 RLSDHCPISIDY 302 + SDH P+ ++ Sbjct: 275 QGSDHHPLWVEL 286 >gi|257789897|ref|YP_003180503.1| exodeoxyribonuclease III Xth [Eggerthella lenta DSM 2243] gi|317489355|ref|ZP_07947868.1| exodeoxyribonuclease III [Eggerthella sp. 1_3_56FAA] gi|325832619|ref|ZP_08165417.1| exodeoxyribonuclease III [Eggerthella sp. HGA1] gi|257473794|gb|ACV54114.1| exodeoxyribonuclease III Xth [Eggerthella lenta DSM 2243] gi|316911526|gb|EFV33122.1| exodeoxyribonuclease III [Eggerthella sp. 1_3_56FAA] gi|325485940|gb|EGC88400.1| exodeoxyribonuclease III [Eggerthella sp. HGA1] Length = 285 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 73/312 (23%), Gaps = 60/312 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R VSWN+N L LDADIV LQE Sbjct: 1 MRFVSWNVNGLRAVLKKGFE---------------DIVCELDADIVALQETKLQEG-QAT 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDI-------HTAIAVRKKNVRVLQQSYPLLGAKDS 136 + ++S +S R++ +P D Sbjct: 45 LDLPQYREYWSYAEKKGYSGTAIFCKEQPLQALHGLGFPHLDTEGRIVALEFPKFWFVDV 104 Query: 137 FSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 ++ + + L+ + P+ L Sbjct: 105 YTPNAQNELARIDHRMEWDDAFRDFCKGLEEGVLP-AGVPVERPALGEGHVAISELPLTQ 163 Query: 196 TQKKESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKE 240 + P V+ GDFN + + + F Sbjct: 164 PGETADPKPVVMCGDFNVAHQEIDLKNPGPNRGKAGFSDEERGKFTDLLEVGFVDSFRHL 223 Query: 241 KDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 A + IDYF++ + + +Y Sbjct: 224 HPDVTGAYSWWSYRFKARQTNAGWRIDYFLVSDELAPKIQSACIYDEVY----------- 272 Query: 292 LSDHCPISIDYD 303 SDHCP+ I+ + Sbjct: 273 GSDHCPVGIELE 284 >gi|254248843|ref|ZP_04942163.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia PC184] gi|124875344|gb|EAY65334.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia PC184] Length = 684 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 42/316 (13%), Positives = 83/316 (26%), Gaps = 47/316 (14%) Query: 23 KVRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEM 74 VR+VS+N+ N + + R + + L AD++ L E+ Sbjct: 362 DVRIVSFNVFNYFNGDGHGGGFDAPDNRGAKTPAAFARQEAKIVAALRALRADVIGLMEI 421 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + R ++ R + I A+ + V + ++ + Sbjct: 422 ANNGHGDASAIRRLAAQLGGGWRAVDPGTARLGRDAIAVALLYDSRTVEPVGRAVTVALG 481 Query: 134 KDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ----- 186 R + + V HLKS + S Sbjct: 482 GRH------RPPLAQTFRRIDGIRTFTVAVNHLKSKNCPHASGANLDQSDGQGCWNAART 535 Query: 187 -QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 A + DW+ + ++ GD N +T++ + Sbjct: 536 RAAARVADWLATSPTGIAADGVLLIGDLNSYAKEDP-----LRTLEARGYANLVVRFVGD 590 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK----------------- 286 + +D+ + + F I +E + Sbjct: 591 AAYSYVFRGEAGNLDHALATPALAARVKAVRFWHINADEPVVLQPVPDYKTSAQRSAYYA 650 Query: 287 SRGKRLSDHCPISIDY 302 R SDH P+ ID Sbjct: 651 PDAYRSSDHDPVVIDL 666 >gi|109639337|gb|ABG36534.1| exodeoxyribonuclease III [Haemophilus ducreyi] Length = 267 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 84/311 (27%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L D++ LQE + + Sbjct: 1 MKFISFNINGL----------------RARPHQLEAIINKHQPDVIGLQEIKVADEDFPH 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + +FY H +A+ K + + D+ R Sbjct: 45 QLVEHLGYHVFYH------------GQKGHYGVALLTKKQPLTIRKGFPNDTADAQKR-- 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + + + VL+ F + S ++ L+ ++ + Sbjct: 91 ---MIMAEINTDFGILTVLN-----GYFPQGENRQHETKFSAKAKFYADLQHYLETTLTA 142 Query: 202 LVPFVIAGDFNR---------------------KINYLGNNDDFWKTIDPNDSLIRFPKE 240 P +I GD N K ++L ++ + + F Sbjct: 143 DNPIIIMGDMNICSTDLDIGIGEANRKRWLREGKCSFLPEEREWLNRLYHYGLVDTFRAM 202 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + ID + ++ D ++ Sbjct: 203 HPTTTDQFSWFDYRSKGFNDNRGLRIDLILASTTLANHCVETGI-------DLEIRAMEK 255 Query: 292 LSDHCPISIDY 302 SDH PI + Sbjct: 256 PSDHAPIWAVF 266 >gi|326318344|ref|YP_004236016.1| endonuclease/exonuclease/phosphatase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375180|gb|ADX47449.1| Endonuclease/exonuclease/phosphatase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 252 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 85/288 (29%), Gaps = 53/288 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +R+ ++NI+ + + L + LDADIV LQE+ + Sbjct: 10 AGILRIATYNIH--------KGVQGLGPARRLEIHNLGHAVEQLDADIVCLQEVRKVH-R 60 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNN------DIHTAIAVRKKNVRVLQQSYPLLGAK 134 W E L A+ + + Q Sbjct: 61 RGAQHFPRWPELPQAEFLAPEGYEAVYRTNAFTRHGEHGNALLTRWPVIGHQH-----ED 115 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 S R R + + VE+ G+++ + +HL +Q L+ + Sbjct: 116 MSDHRFEQRGLLHVEVEVQGRRVHAIVVHLGLIPGS-------------RVRQVAQLQRF 162 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + ++ P ++AGDFN D + + E + R Sbjct: 163 VAREVPDGAPLLVAGDFN---------DWGQQVKHALAAFGLREYEGEPRALTYPARLPL 213 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D+ + + R+SDH P+ ++ Sbjct: 214 VQLDHVYVRG-----MEPMGLHVPRGRI------WWRMSDHLPLIAEF 250 >gi|153876175|ref|ZP_02003628.1| Endonuclease/exonuclease/phosphatase [Beggiatoa sp. PS] gi|152067361|gb|EDN66372.1| Endonuclease/exonuclease/phosphatase [Beggiatoa sp. PS] Length = 253 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 82/302 (27%), Gaps = 74/302 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L L + N DI+ LQE+ Sbjct: 2 LKIATWNVNSL----------------RVRLPHLLDWLSNHQPDIIALQEI--------- 36 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ + + R Sbjct: 37 -KVMDEQFPLAEIEAAGYHALFAGQKTYNGVALLSRKP------GNDIITDFPDFNDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + K+ +L++++ + +DS + Y + L+++I + Sbjct: 90 RFLGATYD----KLRILNVYVPNGASVDSDKYQYK------LEWLTQLQNYICDNLKQYP 139 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249 ++ GDFN D K + + L + + + Sbjct: 140 RLIVLGDFNIAPEDQDVYDPIAWAGKILVSPPERTALQNLLHLGLKDTFRLFEQPVASFS 199 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID + D R +R SDH P+ Sbjct: 200 WWDYRRGAFLRNHGIRIDLILASTAL---------HCTGCTIDTAPRRLERPSDHAPVVA 250 Query: 301 DY 302 + Sbjct: 251 TF 252 >gi|261253090|ref|ZP_05945663.1| hypothetical protein VIA_003115 [Vibrio orientalis CIP 102891] gi|260936481|gb|EEX92470.1| hypothetical protein VIA_003115 [Vibrio orientalis CIP 102891] Length = 316 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 101/308 (32%), Gaps = 29/308 (9%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + + + N+ + ++ + + + LDADI+ LQE+ S Sbjct: 4 TKTLTFATANLFNFLKPPDAFYEFSNIYGQEEWQAKCQWTKSQINKLDADIIGLQEVFSI 63 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 AV ++ + + ++ T + A+A + + K Sbjct: 64 EAVQQLLAECGFP-YFVTVDKPKSESDYIYSRPVVALASKYPILHAEAVKPLKEPVKAYQ 122 Query: 138 S--RAGNRRAVELLVEING-KKIWVLDIHLKS-------FCFLDSLENTYSPSCSLLSQQ 187 +R+ + ++++ ++ V HLKS +S S L + Sbjct: 123 IELPEFSRKPIHAVIKVPTVGEVAVYVCHLKSQRATEPTLKGEESQLLGQWLSSQLRGWE 182 Query: 188 AQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWK--------TIDPNDSLIRFP 238 + L+ ++ Q ++S P + GD N+ + + + + + + Sbjct: 183 SMMLRLYMDKQYQKSPRPTALLGDMNQPLTSDITGLLTQRADEEGEALVLTDSWLVYKHA 242 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKRL 292 +R + + +DY ++ Q + Y D R K+ Sbjct: 243 AISPARAATHYHFSKGNVLDYVILSQEFQPDSQRSIAEVSRYLVQDQHLINPIYDRDKQA 302 Query: 293 SDHCPISI 300 SDH +++ Sbjct: 303 SDHAFVAV 310 >gi|298207113|ref|YP_003715292.1| hypothetical protein CA2559_02630 [Croceibacter atlanticus HTCC2559] gi|83849747|gb|EAP87615.1| hypothetical protein CA2559_02630 [Croceibacter atlanticus HTCC2559] Length = 359 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 40/359 (11%), Positives = 87/359 (24%), Gaps = 66/359 (18%) Query: 1 MIRKYVLALVF-FLVPC-TASVAQK------------VRLVSWNINTLSEQEGVSLW--- 43 M K + L+ C ++ VA + + +N+ L + E + Sbjct: 1 MKTKITIFLIACLAFSCGSSKVATTESKVSTEKKYNVLTVAFYNLENLFDTEDDTEKNDE 60 Query: 44 --------KNSVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNT 88 + + S + + + AD IV L EM + + + + Sbjct: 61 ASPIMEMQNDREQAYQSKLANMAKVISEIGADVAKNSPAIVGLCEMENRKVLEDLVNQP- 119 Query: 89 WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ---QSYPLLGAKDSFSRAGNRRA 145 I H I A+ +K ++ + D R R Sbjct: 120 --GLVEKNYGIAHYDSPDRRGIDVALLYQKDLFKLQSATNHELLIYDNNDPEKRVYTRDQ 177 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + + ++G ++ + H S ++ + L++ + + Sbjct: 178 LLVTGLLDGDEMNFIVNHWPSRSGGEARSRYKREKAAALNKSIIDSLQAVNPYAK----I 233 Query: 206 VIAGDFNRKINYLGNNDDFWKT-----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 + GD N ++ D D Sbjct: 234 ITMGDLNDDPTNTSVTKVLGAKDEKENLETKDLYNPMMDLFKQGIGTLAYRDGWNLFDQM 293 Query: 261 VMDQNAYK------FLIQESFSEILYNEDDIKSRGKRL-------------SDHCPISI 300 +M + + Y + SDH P+ + Sbjct: 294 IMSKPLLDEDFSSYRFYKVGIYNKNYLANPRGRYKGYPFRSWSDGGFTNGFSDHFPVYV 352 >gi|289663812|ref|ZP_06485393.1| nuclease [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 1195 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 40/340 (11%), Positives = 92/340 (27%), Gaps = 54/340 (15%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69 P A V + ++N+ + + + +N DI+ Sbjct: 578 PAPMPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNYLHMPDIL 637 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK-----KN 120 E+ + + + + + S + + + + I V+ Sbjct: 638 GTVEVENISVLQALAARVNADAVASGQSNPQYVAYLQEGNDVGGIDVGFLVKTADIAGGV 697 Query: 121 VRVLQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGK-----KIWVLDIHLKSFC 168 RV S G +++ R + L ++ + + +H +S Sbjct: 698 PRVEVLSIAQEGKTTTWTEPAGGVSLLNDRPPLVLTANVHQVDGRTLPLTAIVVHQRSLN 757 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFW- 225 ++ + + + QA++L + Q+ ++ GDFN G D Sbjct: 758 GAETDDAAGTRIRAKRQAQAEYLARLLQTRQQLNPDEKVLVMGDFNAFEFNDGYVDAMGT 817 Query: 226 -----------------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 + D + + N +D+ + ++ + Sbjct: 818 VTGKPAPDAQTVVGGDGADLVNTDYTDLTWFTTPDQSYSYAFDGNVQSLDHILANEALMR 877 Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300 S S + RLSDH P + Sbjct: 878 SPQIASLSVGHARINADFPGTARNDANTPTRLSDHDPTVV 917 >gi|296313346|ref|ZP_06863287.1| exodeoxyribonuclease III [Neisseria polysaccharea ATCC 43768] gi|296840163|gb|EFH24101.1| exodeoxyribonuclease III [Neisseria polysaccharea ATCC 43768] Length = 256 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 87/304 (28%), Gaps = 73/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + DI+ LQE Sbjct: 1 MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ ++V S R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIISRSVPQDVHF-----GLPSLPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V++++ + LDS + Y Q L +++ + Sbjct: 90 RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRYG 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D +++ + + Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWYEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ L D +R SDH P++ Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDV-------RVDLDTRALERPSDHAPVA 251 Query: 300 IDYD 303 ++D Sbjct: 252 AEFD 255 >gi|255066148|ref|ZP_05318003.1| exodeoxyribonuclease III [Neisseria sicca ATCC 29256] gi|255049693|gb|EET45157.1| exodeoxyribonuclease III [Neisseria sicca ATCC 29256] Length = 256 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 86/304 (28%), Gaps = 73/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + + D++ LQE Sbjct: 1 MKITTWNVNSLN----------------VRLPQVQNWLADHQPDVLVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ ++ + R Sbjct: 35 LKLDQDKFPAAALQMMGWHSVWSGQKTYNGVAIISRSEPQDVHV-----GLPTLPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V++++ + LDS + Y Q L +++ + Sbjct: 90 RVIAATVN----GVRVINVYCVNGEALDSPKFLYKE------QWFAALTEFVRDEMTRYE 139 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D ++K + + Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWFKNLLDLGLTDSLRQIHPEGAF-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ L D +R SDH P+ Sbjct: 199 TWFDYRGAMFQRKLGLRIDHQLISPALSAVLKDVYV-------DLDARAQERPSDHAPVV 251 Query: 300 IDYD 303 ++D Sbjct: 252 AEFD 255 >gi|152979045|ref|YP_001344674.1| exodeoxyribonuclease III [Actinobacillus succinogenes 130Z] gi|150840768|gb|ABR74739.1| exodeoxyribonuclease III [Actinobacillus succinogenes 130Z] Length = 266 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 86/312 (27%), Gaps = 78/312 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++S+NIN L + L Q DI+ LQE + Sbjct: 1 MKVISFNINGL----------------RARPHQLEQIIDIHRPDILGLQEIKVADEQFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + +F+ H +A+ K + ++++ Sbjct: 45 EIVADLGYHVFHY------------GQKGHYGVALLTKQEPKAVRRGFPTDSEEA----- 87 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 RR + + + + V++ F + ++ L+ ++ + Sbjct: 88 QRRIIMADFDTDFGSLTVIN-----GYFPQGESRAHETKFPAKAKFYADLRRYVAEDLPC 142 Query: 202 LVPFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKE 240 VI GD N L ++++ + F K Sbjct: 143 DN-VVIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWYQHLYDLGLEDTFRKL 201 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + ID+ + + + + D ++ Sbjct: 202 NPTASDKFSWFDYRSKGFNENRGLRIDHILANTKLAEHCTETGI-------DLTIRAMEK 254 Query: 292 LSDHCPISIDYD 303 SDH PI + Sbjct: 255 PSDHAPIWAVFS 266 >gi|325474697|gb|EGC77883.1| endonuclease/exonuclease/phosphatase [Treponema denticola F0402] Length = 342 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 103/342 (30%), Gaps = 59/342 (17%) Query: 4 KYVLALVFFLVPCTASVA---------QKVRLVSWNINTLSE--QEGVSLWKNSVKRTTS 52 + F L CT ++ +VS+N T + ++G + +T Sbjct: 14 SIFICFCFILCACTGCTNVFRLQNIGKDEISIVSYNAQTFFDAVEDGREFKEFKGSKTKW 73 Query: 53 DYTLLRQYAKNLD-----------------ADIVFLQEMGSYNAVAKVFPKNTWCIFYST 95 + L DI+ LQE+ S + Y Sbjct: 74 SKEKYAERLFRLKEAVNLSCLALGLGEKAIPDILVLQEIESRAVIDDFCKILPMNNSYKY 133 Query: 96 ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-- 153 I + + A+ K + + + K S R +E + I Sbjct: 134 AVFIPPQNGGAFS-----TALLSKFPITETKVFNIYSGKRS-----LRPLIETRIRIGNS 183 Query: 154 --GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211 ++ +L++H KS ++ ++ + LK E PF+I GDF Sbjct: 184 TGDNELVLLNVHWKSKVGDSDTDSIRRQQEEQAYKRLKELKA-----SEPQTPFIICGDF 238 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK--- 268 N+ + +F + ++ +E + + + ID+F N Sbjct: 239 NQTLEEFSLLSEFDNCWN-IEAYRAAAQEGNQPEGSYFYKESWEGIDHFFYSDNLSDGKN 297 Query: 269 -------FLIQESFSEILYNEDDIKSR-GKRLSDHCPISIDY 302 + + ++ D GK SDH PI I Sbjct: 298 FDLSFFCVINLKPLTDTSGKPDKYSVYSGKGYSDHLPIGIIL 339 >gi|265752690|ref|ZP_06088259.1| metallophosphoesterase [Bacteroides sp. 3_1_33FAA] gi|263235876|gb|EEZ21371.1| metallophosphoesterase [Bacteroides sp. 3_1_33FAA] Length = 247 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 81/309 (26%), Gaps = 71/309 (22%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K + L L +A +RL+++NI + + V D+ + Sbjct: 1 MKKTLPLLFILLFALSAQSQNSLRLMTYNIKNANGMDDVC-----------DFQRIADVI 49 Query: 62 KNLDADIVFLQEMGSYN-------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 ++ ++V LQE+ S + ++ + +++ + I Sbjct: 50 NHIHPEVVALQELDSMTHRSGQKYVLGEIAGRTQMHAYFAP--------AIDYDGGKYGI 101 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + K + V ++ L G R R + + + Sbjct: 102 GLLTKEIPVSLKTMTLPG------REEARALIMAEFDN-------YIYCCTHLSLTEEDR 148 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 L+ PF +AGD N + Sbjct: 149 -------------MASLELIKDFAAAHKKPFFLAGDLNAEPESAFIKYL----------Q 185 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 F D + IDY + K S + SD Sbjct: 186 QDFQILSDVNQHTFPAPAPTETIDYITALKQNMKGFTVTSAQVVNEPV---------ASD 236 Query: 295 HCPISIDYD 303 H P+ I + Sbjct: 237 HRPLVIVLE 245 >gi|88799886|ref|ZP_01115458.1| predicted extracellular nuclease [Reinekea sp. MED297] gi|88777317|gb|EAR08520.1| predicted extracellular nuclease [Reinekea sp. MED297] Length = 851 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 43/334 (12%), Positives = 89/334 (26%), Gaps = 56/334 (16%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDADIVFL 71 A ++R+ S+N+ +G + + L ++AD++ L Sbjct: 442 AVAESELRVASFNVLNFFNGDGQGGDFPTPRGANDVYELERQTAKLVSAITAINADVIGL 501 Query: 72 QEMGSYNAVAK-------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV--- 121 E+ + + + + +I + ++DI + R V Sbjct: 502 MEIENDGFGELSAIAELTAAINAELPVEDAYQYVIPNVDLIGDDDIAVGMLYRPSVVSPV 561 Query: 122 ----RVLQQSYPLLG-AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + QS PL + F NR A+ V++ + + +S + Sbjct: 562 GQATILDSQSSPLDDQGEPLFIDDLNRPALAQSVQLTNSDTVMTVVVNHFKSKGNSNCDD 621 Query: 177 YSPSCSLLSQQAQWLKDWITQKKE---------SLVPFVIAGDFNRKINYLGNNDDFWKT 227 YS + +I GD N T Sbjct: 622 YSDCDQGQGAYNVARTKAAQALAQWLASGPTGVETDHVMILGDLNAYSQEDP-----LTT 676 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + N ++ +D+ + ++ I +E + Sbjct: 677 LMENGYQRLQTEDG----YTYVYSGETGTLDHALATGPLSSNVVGVQQWHINTDEPRVLD 732 Query: 288 RG-----------------KRLSDHCPISIDYDF 304 R SDH P+ +D+ F Sbjct: 733 YNTEYKTESQILGFYAPDAYRSSDHDPVIVDFAF 766 >gi|292488442|ref|YP_003531324.1| exonuclease III [Erwinia amylovora CFBP1430] gi|291553871|emb|CBA20916.1| Exonuclease III [Erwinia amylovora CFBP1430] Length = 301 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 38/313 (12%), Positives = 87/313 (27%), Gaps = 73/313 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++ VS+NIN L + L+ + D++ LQE Sbjct: 31 APAMKFVSFNINGL----------------RARPHQLQAIVEQHQPDVIGLQE---TKVH 71 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +FP + + + H +A+ K V + +D+ Sbjct: 72 DDMFP-------LAEVASLGYHVFYHGQKGHYGVALLCKQQPVAVRRGFASDDEDA---- 120 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + + + V++ F + + + L ++ Q+++ Sbjct: 121 -QRRIIMADIMTPSGLLTVIN-----GYFPQGESRDHPTKFPAKEKFYRDLHSYLEQQQK 174 Query: 201 SLVPFVIAGDFNRK---------------------INYLGNNDDFWKTIDPNDSLIRFPK 239 +I GD N ++L ++ + + + Sbjct: 175 PDNQLLIMGDMNISSGDLDIGIGEENRKRWLRTGKCSFLPEEREWMDKLMNWGLVDTWRA 234 Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + + + ID + + + D + Sbjct: 235 QHATINDRFSWFDYRSKGFDDNRGLRIDLVLASRPLADRCVATGI-------DYDIRAME 287 Query: 291 RLSDHCPISIDYD 303 + SDH PI ++ Sbjct: 288 KPSDHAPIWAEFS 300 >gi|152968141|ref|YP_001363925.1| exodeoxyribonuclease III Xth [Kineococcus radiotolerans SRS30216] gi|151362658|gb|ABS05661.1| exodeoxyribonuclease III Xth [Kineococcus radiotolerans SRS30216] Length = 266 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 75/303 (24%), Gaps = 65/303 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N + + + D D+V LQE + Sbjct: 1 MRLATWNVN----------------SVRARLDRVLAWIDRSDVDVVALQETKCKDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + +A+ + + S F Sbjct: 41 ------QFPEQAFRDLGYEVAHHGLSQWNGVALLSRVG-LEDVSTAFSPDVPRFGEPPVV 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + G + V +++ + L+ Y ++A + W+ Q + Sbjct: 94 EARAVGALCGG--VRVWSLYVPNGRGLEDPHYPYKLEWLERLREAG--RGWLAQ--DPAA 147 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + GDFN + + Sbjct: 148 QVALVGDFNIAPTDEDVWDPEAFAGATHVSAPERAAFTALVEAGFADVVRPHAPGP-GTY 206 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ + + + D + +GK SDH P+ Sbjct: 207 TYWDYQQLRFAKRQGMRIDFVLGSPALAARVSGATI-------DREERKGKGASDHAPVV 259 Query: 300 IDY 302 ++ Sbjct: 260 VEL 262 >gi|262203673|ref|YP_003274881.1| exodeoxyribonuclease III Xth [Gordonia bronchialis DSM 43247] gi|262087020|gb|ACY22988.1| exodeoxyribonuclease III Xth [Gordonia bronchialis DSM 43247] Length = 293 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 79/304 (25%), Gaps = 69/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N L + D+V LQE K+ Sbjct: 1 MRVATWNVN----------------SVKQRIPRLLPWLDERRPDVVCLQE-------TKL 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGN 142 + + + ++ +A+ K + + + + Sbjct: 38 SDEAFHDVLGADLAERGYAIAHHGQGQWNGVALLSKVGLDDVTTGFDDMPGYPDPATLEA 97 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + + +++ + DS Y L I++ + Sbjct: 98 RAVSAVC-----GGLRIYSLYVPNGRVPDSDHYRYK------LTWLAALAKSISEPSST- 145 Query: 203 VPFVIAGDFNRKINYLGNNDD--------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N D + L +++ Sbjct: 146 ---LLCGDMNIAPADADVFDPDAYVGHTHVTEPERAALSAFAELGLHDVVRDRWPDSRVF 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID + ++A + D +G + SDH P+ Sbjct: 203 SYWDYRAGMFHKDLGMRIDLILAGESATDRVAAAWV-------DRKARKGTKPSDHAPVI 255 Query: 300 IDYD 303 +D D Sbjct: 256 VDLD 259 >gi|170727269|ref|YP_001761295.1| exonuclease III [Shewanella woodyi ATCC 51908] gi|169812616|gb|ACA87200.1| exodeoxyribonuclease III [Shewanella woodyi ATCC 51908] Length = 268 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 91/309 (29%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN + L+ + DI+ LQE +++ V Sbjct: 1 MKIVSFNING----------------IRARLHQLQALIDSHQPDIIGLQETKAHDDV--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K V Q +D A R Sbjct: 42 -------FPVADVEAMGYKVHYHGGKAHYGVAMLSKLEPVKVQKGFPTDGED----AQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+ + VL+ F ++ Q + L ++ + + Sbjct: 91 MIMGTFTQENGRPLTVLN-----GYFPQGENISHETKYPAKRQFYKDLMIYLNEHHSADE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 + GD N ++ ++ KT+ L F + Sbjct: 146 DIAVIGDINISPIDLDIGIGEPNAKRWLKTGKCSFQPEEREWLKTLMDWGLLDTFRELHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 R + + ID + ++ L++ + D ++ S Sbjct: 206 ERVDRYSWFDYRSKGFDDNRGLRIDVVLATKSLADRLVES-------DVDYDLRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSSF 267 >gi|300868692|ref|ZP_07113303.1| exodeoxyribonuclease III [Oscillatoria sp. PCC 6506] gi|300333253|emb|CBN58495.1| exodeoxyribonuclease III [Oscillatoria sp. PCC 6506] Length = 261 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 87/305 (28%), Gaps = 70/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N S + ++ + D++ LQE + Sbjct: 1 MKIATWNVN----------------SIRSRLEQVLEWLQANPVDVLCLQETKVID----- 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY--PLLGAKDSFSRAG 141 I ++ S + +A+ + + P+LG Sbjct: 40 -----QDFPLQPFLDIGYNFYISGQKSYNGVAIFSRLPMTDISTGFAPILGTDIVGEFDE 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R + ++ I ++++++ + + S + Y + L++++ + Sbjct: 95 QKRLITGII----ADIRIVNLYIPNGSEVGSEKYNYK------LNWLKLLQEYLKIIIDK 144 Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246 + GDFN + + + I F D + Sbjct: 145 SPNLCVCGDFNIAPDDRDIHNPKAFKNQIMASPAERQALQEIVALGFSDAFRIFTDEGGH 204 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ + + + D + + SDH P Sbjct: 205 -FSWWDYRTGGFRHNRGWRIDHHYLSLSLCDRAKSCTI-------DKTPRQLTKPSDHAP 256 Query: 298 ISIDY 302 + ++ Sbjct: 257 VIVEI 261 >gi|159037346|ref|YP_001536599.1| exodeoxyribonuclease III Xth [Salinispora arenicola CNS-205] gi|157916181|gb|ABV97608.1| exodeoxyribonuclease III Xth [Salinispora arenicola CNS-205] Length = 265 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 75/302 (24%), Gaps = 71/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N + L + + D+V LQE + Sbjct: 1 MRLATWNVN----------------SVKARLPRLLDWLAGTEPDVVCLQETKCPDGA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ ++ +A+ + + F R Sbjct: 42 -------FPVAEVGALGYTVASHSDGRWNGVAILSRVGLTEVTVG--FPGEPGFPDPEAR 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A+ + V +++ + D Y + L+D + + Sbjct: 93 -ALAATC----AGLRVWSVYVPNGRTPDDPHYAYKLA------WLGALRDALEVELTGGP 141 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GDFN D + P + Sbjct: 142 PLAVCGDFNVAPTDADVWDPALFTGSTHVTPAERVALSALRDLGLADVVPTPMKGP-HPF 200 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID + + D +GK SDH PI Sbjct: 201 TYWDYRAGMFHQNKGMRIDLVYASAPFTRAVRAAYV-------DREARKGKGPSDHAPIV 253 Query: 300 ID 301 +D Sbjct: 254 VD 255 >gi|295110263|emb|CBL24216.1| exodeoxyribonuclease III [Ruminococcus obeum A2-162] Length = 253 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 88/307 (28%), Gaps = 82/307 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + K L+AD+ LQE ++ Sbjct: 1 MKLISWNVNGIRACITKGFEDR---------------FKELNADVFCLQETKCQQGQVEL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +N ++ AV K + + Sbjct: 46 -ELPGYHQYWN----------YANRRGYSGTAVFTKKEPLSVVNG--------------- 79 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--S 201 + +E + K+ V+ + + F F+ L + +W +D++ + Sbjct: 80 ----IGIEAHDKEGRVITLEFEEFYFVTVYTPNSQSELRRLEYRMEWERDFLAYLLKLQE 135 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P + GD N + + + + F + Sbjct: 136 KKPVICCGDMNVAHQEIDLKNPKTNRKNAGFTDEERACFSRMLESGFVDTFRYFYPDKEG 195 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDYF++ + L S + SDHCP Sbjct: 196 IYSWWSYRFKAREKNAGWRIDYFIVSPSLKDRLQDASIHTEI-----------MGSDHCP 244 Query: 298 ISIDYDF 304 + +D DF Sbjct: 245 VELDIDF 251 >gi|227822472|ref|YP_002826444.1| hypothetical protein NGR_c19280 [Sinorhizobium fredii NGR234] gi|227341473|gb|ACP25691.1| hypothetical protein NGR_c19280 [Sinorhizobium fredii NGR234] Length = 368 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 106/366 (28%), Gaps = 85/366 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVK----------RTTSDYTLLRQY------------ 60 +RL ++NI L + S ++N +K R+ ++Y L + Sbjct: 2 SLRLATFNIENLLSRFDFSGFRNQLKQDRVLRLFDVRSEAEYQRLEEARTIAHTDDTRQM 61 Query: 61 ----AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + DADI+ LQE + A+ + + + R + + + I A+ + Sbjct: 62 SALAIADCDADILCLQEADNMAALQAFEYGYLFRMVGNGYRQKYLIEGNDSRGIDVAVLM 121 Query: 117 RK------KNVRVLQQSYPLLGAKDSF-------------SRAGNRRAVELLVEINGKKI 157 R+ + + +S+ L +D R R +E+ + I G+ + Sbjct: 122 REETRDGQRIECLEVKSHATLTYEDLDLFNEELALTNRPRDRIFKRDCLEVDLRIGGRPL 181 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP----FVIAGDFNR 213 + +H KS + + +L + +A+ ++ I + F I GD N Sbjct: 182 TLYVVHFKSMGPARDGLDGRRATMALRAAEAKAVRHVIESRFGRGHTADKMFAICGDMND 241 Query: 214 KIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-- 255 + + + R Sbjct: 242 YQEKVVILGDRRNGYEFVPHEEEVSALDILSHDGFVENPMSRRPVLDRWTLFHSRGPEER 301 Query: 256 ---PIDYFVMDQNAYKFLIQESFSEILY---------------NEDDIKSRGKRLSDHCP 297 +DY + + + + SDHCP Sbjct: 302 HLCQLDYIWLSPALARRNSSRVPEIVRAGQPYRTIFPAGQEVERYPRTGWDRPKASDHCP 361 Query: 298 ISIDYD 303 + + D Sbjct: 362 LVMTLD 367 >gi|74317491|ref|YP_315231.1| hypothetical protein Tbd_1473 [Thiobacillus denitrificans ATCC 25259] gi|74056986|gb|AAZ97426.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 273 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 36/282 (12%), Positives = 80/282 (28%), Gaps = 52/282 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + S+NI+ + D + ++LD D + LQE+ S Sbjct: 7 GHSFSVASYNIHQCVGVDR-----------RRDAARIATVIRDLDCDAIGLQEVDSRAGP 55 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + + + + +D A+ + + + + L SF Sbjct: 56 HADSKQLEYLAEATGMQALA-GPTILRHDGDYGNALLTRRPILAVRRHDL-----SFRSR 109 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R A+++ ++++G ++ V+ HL + Q + L + E Sbjct: 110 EPRGALDVDLDVHGHRVRVIVTHLGLRP-------------AERRYQVKLLLKLL-HPVE 155 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 P V GD N + + L +D Sbjct: 156 PGQPVVALGDINEWLPLSRPLRWMHGLL-----------GPPPWQRTFPTLLPMFALDRV 204 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ++ ++ + + SDH P+ Sbjct: 205 WVRPHSA----------LVDLRAHRRKPARMASDHYPLRAVI 236 >gi|15641862|ref|NP_231494.1| exonuclease III [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587322|ref|ZP_01677094.1| exodeoxyribonuclease III [Vibrio cholerae 2740-80] gi|147674047|ref|YP_001217394.1| exonuclease III [Vibrio cholerae O395] gi|153820118|ref|ZP_01972785.1| exodeoxyribonuclease III [Vibrio cholerae NCTC 8457] gi|227081989|ref|YP_002810540.1| exodeoxyribonuclease III [Vibrio cholerae M66-2] gi|229508043|ref|ZP_04397548.1| exodeoxyribonuclease III [Vibrio cholerae BX 330286] gi|229511718|ref|ZP_04401197.1| exodeoxyribonuclease III [Vibrio cholerae B33] gi|229518856|ref|ZP_04408299.1| exodeoxyribonuclease III [Vibrio cholerae RC9] gi|229607590|ref|YP_002878238.1| exonuclease III [Vibrio cholerae MJ-1236] gi|254848946|ref|ZP_05238296.1| exonuclease III [Vibrio cholerae MO10] gi|255745380|ref|ZP_05419329.1| exodeoxyribonuclease III [Vibrio cholera CIRS 101] gi|262153517|ref|ZP_06028646.1| exodeoxyribonuclease III [Vibrio cholerae INDRE 91/1] gi|262167417|ref|ZP_06035124.1| exodeoxyribonuclease III [Vibrio cholerae RC27] gi|298498101|ref|ZP_07007908.1| exodeoxyribonuclease III [Vibrio cholerae MAK 757] gi|9656389|gb|AAF95008.1| exodeoxyribonuclease III [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548482|gb|EAX58540.1| exodeoxyribonuclease III [Vibrio cholerae 2740-80] gi|126509336|gb|EAZ71930.1| exodeoxyribonuclease III [Vibrio cholerae NCTC 8457] gi|146315930|gb|ABQ20469.1| exodeoxyribonuclease III [Vibrio cholerae O395] gi|227009877|gb|ACP06089.1| exodeoxyribonuclease III [Vibrio cholerae M66-2] gi|227013758|gb|ACP09968.1| exodeoxyribonuclease III [Vibrio cholerae O395] gi|229343545|gb|EEO08520.1| exodeoxyribonuclease III [Vibrio cholerae RC9] gi|229351683|gb|EEO16624.1| exodeoxyribonuclease III [Vibrio cholerae B33] gi|229355548|gb|EEO20469.1| exodeoxyribonuclease III [Vibrio cholerae BX 330286] gi|229370245|gb|ACQ60668.1| exodeoxyribonuclease III [Vibrio cholerae MJ-1236] gi|254844651|gb|EET23065.1| exonuclease III [Vibrio cholerae MO10] gi|255737210|gb|EET92606.1| exodeoxyribonuclease III [Vibrio cholera CIRS 101] gi|262024114|gb|EEY42808.1| exodeoxyribonuclease III [Vibrio cholerae RC27] gi|262030644|gb|EEY49279.1| exodeoxyribonuclease III [Vibrio cholerae INDRE 91/1] gi|297542434|gb|EFH78484.1| exodeoxyribonuclease III [Vibrio cholerae MAK 757] Length = 268 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 83/311 (26%), Gaps = 76/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++S+NIN L + L+ D++ LQE + Sbjct: 1 MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEAFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +++ H +A+ K V + G Sbjct: 45 QEVEAMGYQVYFH------------GQKAHYGVAILCKQTPVEV----IKGFPTDNEEHQ 88 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + NG+K +L+ F + Q + L ++ + + + Sbjct: 89 KRMIMATFADQNGQKTTILN-----GYFPQGDNVEHETKFPYKRQFYRDLMTYLREHRSN 143 Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240 V+ GD N ++ ++ +T+ + F + Sbjct: 144 SERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSFQPEEREWLQTLLDWGLVDTFRQL 203 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + + + D + Sbjct: 204 HPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLAETCQEAGI-------DYELRAIDK 256 Query: 292 LSDHCPISIDY 302 SDH PI + Sbjct: 257 PSDHAPIWTTF 267 >gi|292609568|ref|XP_697426.2| PREDICTED: nocturnin-like isoform 2 [Danio rerio] Length = 378 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 38/289 (13%), Positives = 80/289 (27%), Gaps = 10/289 (3%) Query: 23 KVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-N 78 +R++ WN+ L E + ++ + DI+ LQE+ Y + Sbjct: 84 TIRVMQWNVLAQALGEGMDNFVQCPLDALNWPERKYMILEEILTYKPDILCLQEVDHYFD 143 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 V + + + ++NN L + L + Sbjct: 144 MFQPVLATLGYQSSFCPKPWSPCLDVENNNGPDGCALFFNHKRFQLVNTTHLRLSAMMLK 203 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 L G+ V HLK+ + L + + + + Sbjct: 204 TNQVAIVAALRCRSTGRVFCVGVTHLKARSGWEVLRSAQGSDLLRNLRNITQKIET-EEN 262 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI--- 255 ES +P ++ GDFN + + + ++ + + + + Sbjct: 263 AESAIPLIVCGDFNAEPSEDVYRNFATSSLGLDSAYKLLSTDGKTEPPYTTWKIRPSGES 322 Query: 256 --PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +DY A+ F + SDH + D+ Sbjct: 323 CHTLDYVWYSHRAFDVNAVLDFPTAEQIGPNRLPSYNYPSDHLSLVCDF 371 >gi|310814721|ref|YP_003962685.1| exodeoxyribonuclease III [Ketogulonicigenium vulgare Y25] gi|308753456|gb|ADO41385.1| exodeoxyribonuclease III [Ketogulonicigenium vulgare Y25] Length = 259 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 82/303 (27%), Gaps = 68/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NIN + + ++ D+ QE+ S V + Sbjct: 1 MRIATYNING----------------IKARLETVTEWLTRESPDVAIFQEIKS---VDEG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ S + ++ +A+ K G + +R Sbjct: 42 FPR-------SAIEDLGYNLETHGQKGFNGVAIASKLPMEDVTR----GLPGDDNDEQSR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++L + + Y + + L S Sbjct: 91 WIEATVI--GKTAVRICGLYLPNGNPAPGPKYDYKLA------WMERLHKRAEALLASEE 142 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P +AGD+N D ++ I F + + Sbjct: 143 PAFMAGDYNVIPQAEDAKNPAEWLEDALYLPQTRDAFRRILNLGFTDAFRAITQGPGHYS 202 Query: 249 KN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 N I ID+F++ L ++ SDH P+ + Sbjct: 203 FWDFQAGAWQRDNGIRIDHFLLTPQCADLLQNAWIE-------KDARGREKPSDHVPVWV 255 Query: 301 DYD 303 + D Sbjct: 256 ELD 258 >gi|282874729|ref|ZP_06283608.1| sphingomyelin phosphodiesterase [Staphylococcus epidermidis SK135] gi|281296445|gb|EFA88960.1| sphingomyelin phosphodiesterase [Staphylococcus epidermidis SK135] Length = 327 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 42/299 (14%), Positives = 98/299 (32%), Gaps = 33/299 (11%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++ + N+ L +++ N + +D Y + + D+V L E+ A Sbjct: 35 DSLKITTHNVYFLPT----AIYPNWGQSQRADLISKADYIQ--NQDVVILNELFDKKASK 88 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGA 133 ++ + Y T + ++ N + + K V Q+ + + Sbjct: 89 RLSTRLHSQYPYQTPIVGKGTEGWQNTSGTYRKIKKVSGGVGIVSKWPIVQQEQH-IYKK 147 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 AGN+ + + NGK ++ HL++ + + Q +K Sbjct: 148 GCGADMAGNKGFAYIKINKNGKYHHIIGTHLQA----EDPTCFKGKDKDIRQSQMSEIKQ 203 Query: 194 WI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 +I + P I GD N I ++ + ++N + Sbjct: 204 FIKDKNIPKNEPVYIGGDLNV-IKDSDEYQQMANNLNVSLPTQFDGNAYSWDTSSNSIAK 262 Query: 253 N------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPIS 299 +DY ++D++ + + + + + + + SDH P+S Sbjct: 263 YNYPKLEPQHLDYILLDRDHAQPSSWHNDTHRVKSPEWSVKSWGKTYKYNDYSDHYPLS 321 >gi|88802681|ref|ZP_01118208.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter irgensii 23-P] gi|88781539|gb|EAR12717.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter irgensii 23-P] Length = 329 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 90/294 (30%), Gaps = 27/294 (9%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTS-----DYTLLRQYAKNLDADIVFLQEMGS 76 +++SWN+ + + + L + +DA +V LQE S Sbjct: 49 DSFKVLSWNVAHFVDSFDDPYIDSKRENQPDSLMGNKVASLVVALRRIDAAVVVLQEFES 108 Query: 77 YNAVAKVFPKN----TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV-LQQSYPLL 131 + + ++ + F + + I NV + + Sbjct: 109 AKFLRSLANEHLQDMGYKYFADVPSHGWYMNVVMMSKFPLGIIYGYGNVTTPVLGASIAS 168 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 GA ++ + R + + +HLK+ + ++ Q +L Sbjct: 169 GATETQNTLNTRMWSIDVYPSPNYNFLLTGVHLKAG--------RGERNVAMRKGQINFL 220 Query: 192 KDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 K + ++ ++ GDFN N + + P + Sbjct: 221 KQQFKRFLKEDKNKNILVLGDFNSVQGSEEINLFLQEKNKREKFIDPLPDSAM----THT 276 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + K +DY +++ N YK S +SDH P++I++ Sbjct: 277 SDAPKRRLDYVLINTNMYKEYKVGSAKVSSLFSPLKMRE---ISDHLPVTINFT 327 >gi|332969618|gb|EGK08636.1| exodeoxyribonuclease III [Kingella kingae ATCC 23330] Length = 256 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 89/301 (29%), Gaps = 73/301 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + +WN+N+L+ + + D++ LQE+ Sbjct: 1 MNITTWNVNSLN----------------VRLPHVSNWLSQHQPDVLVLQELKLEQD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ S + +A+ ++ Q+ + R Sbjct: 41 ------KFPAAALQMMGWQCAWSGQKTYNGVAIISRHAIEDVQT-----GLPALPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++++ + L+S + Y Q L W+ ++ + Sbjct: 90 RVISATIN----GVRVINVYCVNGESLESDKFVYKR------QWFAALTQWVREQMQQYD 139 Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN D +++T+ + + + Sbjct: 140 KLVLLGDFNIAPADDDVYDPEKWREQIHCSSEERAWFQTLLDLGLTDCLRQIHPTGVH-Y 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ + Q+ L D + +R SDH P+S Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILASQSLASSLHDV-------RVDLEERAQERPSDHAPVS 251 Query: 300 I 300 Sbjct: 252 A 252 >gi|222148978|ref|YP_002549935.1| exonuclease III [Agrobacterium vitis S4] gi|221735964|gb|ACM36927.1| exonuclease III [Agrobacterium vitis S4] Length = 264 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 91/305 (29%), Gaps = 68/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + L Q+ ++ DIV LQE+ S V + Sbjct: 1 MKIATWNING----------------VKARLANLCQWLESSSPDIVCLQEIKS---VDEG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + + +A+ K D +R Sbjct: 42 FPR-------AEIEALGYHVETHGQKGFNGVALLSKIRPDEVNRGLPGDEADEQARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + + + V ++L + D L+ + + Sbjct: 92 --IEGVFSVADGVLRVCSLYLPNGNPSDDPVK-----YPYKLAWMARLQRFAADRLALEE 144 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++AGD+N + +L ++ ++ N L + Sbjct: 145 PLILAGDYNVIPHPHDCFDPAVWATDALFLPQTRAAFQALE-NLGLTDAVRATTDATKLY 203 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ A L+ + + ++ SDH P+ Sbjct: 204 SFWDYQAGAWQKNNGIRIDHLLLSAEATDRLVSTEIEKHV-------RSWEKPSDHVPVI 256 Query: 300 IDYDF 304 ++F Sbjct: 257 GYFNF 261 >gi|163793122|ref|ZP_02187098.1| Exonuclease III [alpha proteobacterium BAL199] gi|159181768|gb|EDP66280.1| Exonuclease III [alpha proteobacterium BAL199] Length = 259 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 44/302 (14%), Positives = 86/302 (28%), Gaps = 70/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N + + + K D+V LQE+ + V Sbjct: 1 MKIASWNVN----------------SVKARLDNVLDWLKTASPDVVLLQEIKT---VDDG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + + +A+ K Q D +R Sbjct: 42 FPRLE-------IEALGYQCAIHGQKSYNGVAILSKVGLADVQPRLFGDDNDEQARY--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E V G ++ V I+L + + S + Y + + LK T+ + Sbjct: 92 --LEATV---GGEVRVATIYLPNGNPVTSEKYPYKLA------WMKRLKARATELLRAEG 140 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANK 249 V+ GD+N +D + + + D + Sbjct: 141 AVVLGGDYNVIPTDDDVHDPAAWAGDALCRPETRAAFREILWLGYTDAFRALDQTVHKYT 200 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A L D + SDH P+ Sbjct: 201 FWDYQGGAWQRDEGVRIDHLLLSPQAADRLTASGI-------DTAPRAKPKASDHTPVWC 253 Query: 301 DY 302 + Sbjct: 254 EI 255 >gi|226309896|ref|YP_002769790.1| exodeoxyribonuclease [Brevibacillus brevis NBRC 100599] gi|226092844|dbj|BAH41286.1| exodeoxyribonuclease [Brevibacillus brevis NBRC 100599] Length = 253 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 79/303 (26%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + +Y K +ADI LQE ++ Sbjct: 1 MKLISWNVNGLRACVNKGFY---------------EYFKEANADIFCLQETKLQEGQIEM 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S + + + + R Sbjct: 46 EIGEAYHQYWNYAEKKGYSGTAVFTKM---------------EPLSVRYGLEEDHEPEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + S + L + Sbjct: 91 -----VITLEFQDFYLVTVYTPNAKRDLSRLDYRLEWEDRFRNYLLQL--------DGKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + ++ + + + +A Sbjct: 138 PVVVCGDLNVAHQEIDLKNAKSNRGNSGFTPEEREKMTSLLAAGFVDTYRYFYPDQTDAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ + L++ SDHCP+ Sbjct: 198 TWWSFMPKVRERNIGWRIDYFLASERLAPALLRAGI-----------DSQVMGSDHCPVV 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|29348219|ref|NP_811722.1| hypothetical protein BT_2810 [Bacteroides thetaiotaomicron VPI-5482] gi|29340122|gb|AAO77916.1| Metallophosphoesterase [Bacteroides thetaiotaomicron VPI-5482] Length = 611 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 83/304 (27%), Gaps = 63/304 (20%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K L + L+ +RL+++NI + +GV D+ + Sbjct: 4 MKKIFLLISAILLIVPVQAQHTLRLMTYNIKNATGMDGVC-----------DFQRIANVI 52 Query: 62 KNLDADIVFLQEMG---SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N D+V +QE+ + + V + + I + Sbjct: 53 NNASPDVVAVQEVDSVTNRSNQKYVLGEIAERTQMYACFAPAID----YDGGKYGIGLLS 108 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K V Q+ L G R R + E HL Sbjct: 109 KKAPVHLQTIALPG------REEARALILAEFE----DYIYCCTHLSLTEED-------- 150 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + LK + K+ P +AGD N + + F Sbjct: 151 -----RMKSLEILKTFAASYKK---PLFLAGDMNAEPESDFIK----------ELQKEFR 192 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + R + K IDY + K S + SDH PI Sbjct: 193 ILSNPRQHTFPAPAPKETIDYVAAFKQNDKGFAVVSSEVVNEPV---------ASDHRPI 243 Query: 299 SIDY 302 ++ Sbjct: 244 VVEL 247 >gi|255535312|ref|YP_003095683.1| Exodeoxyribonuclease III [Flavobacteriaceae bacterium 3519-10] gi|255341508|gb|ACU07621.1| Exodeoxyribonuclease III [Flavobacteriaceae bacterium 3519-10] Length = 301 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 77/305 (25%), Gaps = 70/305 (22%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + +++ ++N+N ++ +L ++ DI LQE+ + Sbjct: 44 EPMKIATYNVNGING----------------RLPVLLRWLNEKQPDIACLQELKAPQD-- 85 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +AV K L G + S Sbjct: 86 --------KFPEAAIAEAGYEAVWVGQKSWNGVAVLSKIGTPTVSRTSLPGDE---SDEA 134 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R +E+ + + ++L + + Y Q L S Sbjct: 135 SRY-----LEVKIADLIIACLYLPNGNPAPGPKFDYK------MQWFSRLDAHAEMLITS 183 Query: 202 LVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCN 246 ++ GDFN + + Sbjct: 184 GKKVLLIGDFNVMPTEKDVYKPEKYINDALFHPDVQAAFHNLTEQGWTDAIRYLYPDETI 243 Query: 247 ANKNLRNK--------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + ID+F++ L + D ++ SDH P+ Sbjct: 244 YTFWDYFRNAYQRNAGMRIDHFLLSAEVLPQLKKAGV-------DTDVRGWEKSSDHGPV 296 Query: 299 SIDYD 303 I+ + Sbjct: 297 WIELE 301 >gi|62289818|ref|YP_221611.1| exodeoxyribonuclease III [Brucella abortus bv. 1 str. 9-941] gi|82699743|ref|YP_414317.1| AP endonuclease [Brucella melitensis biovar Abortus 2308] gi|254689123|ref|ZP_05152377.1| AP endonuclease [Brucella abortus bv. 6 str. 870] gi|254697256|ref|ZP_05159084.1| AP endonuclease [Brucella abortus bv. 2 str. 86/8/59] gi|254730155|ref|ZP_05188733.1| AP endonuclease [Brucella abortus bv. 4 str. 292] gi|256257372|ref|ZP_05462908.1| AP endonuclease [Brucella abortus bv. 9 str. C68] gi|260754622|ref|ZP_05866970.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 6 str. 870] gi|260757845|ref|ZP_05870193.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 4 str. 292] gi|260761668|ref|ZP_05874011.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 2 str. 86/8/59] gi|260883649|ref|ZP_05895263.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 9 str. C68] gi|62195950|gb|AAX74250.1| Xth-1, exodeoxyribonuclease III [Brucella abortus bv. 1 str. 9-941] gi|82615844|emb|CAJ10848.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth:Endonuclease/exonuclease/phosphatase family [Brucella melitensis biovar Abortus 2308] gi|260668163|gb|EEX55103.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 4 str. 292] gi|260672100|gb|EEX58921.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 2 str. 86/8/59] gi|260674730|gb|EEX61551.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 6 str. 870] gi|260873177|gb|EEX80246.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 9 str. C68] Length = 260 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 87/302 (28%), Gaps = 67/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + L+ + + DIV LQE+ S + Sbjct: 1 MKIATWNIN----------------SVKARIDNLQHWLRESSPDIVCLQEIKSVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ K D +R Sbjct: 41 ------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLPGDDSDEQARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + + + V+ ++L + +D+ + Y S Q L++W ++ Sbjct: 92 --IEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQRLENWAKKRLTLEE 143 Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIRFPKEKDSRCNANK 249 P V+AGD+N + + N + Sbjct: 144 PLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRASTDESGVYS 203 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A I + + + ++ SDH P+++ Sbjct: 204 FWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------RAWEKPSDHVPVTV 256 Query: 301 DY 302 Sbjct: 257 TL 258 >gi|291223046|ref|XP_002731525.1| PREDICTED: angel-like [Saccoglossus kowalevskii] Length = 349 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 42/299 (14%), Positives = 91/299 (30%), Gaps = 20/299 (6%) Query: 19 SVAQKVRLVSWNINTLS----EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 +R++ WN+ + + + +S+ T + L + D DI+ L+E+ Sbjct: 48 PQGPSIRIMQWNVLADALCQSRDDFIRSPPDSLLWQTRKFRSLEEILT-YDPDIICLEEV 106 Query: 75 GSYNAV-AKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVRVLQQSYPLLG 132 Y+ + + + + +N A+ ++ ++ P L Sbjct: 107 DHYHDFYNPMLQSIGYQGTFKPKPDSPCVYCLDHNGPDGCALFYKQDKFDMIDGITPNLT 166 Query: 133 AKD--SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 D SR N+ A+ + K KS + + L Q + Sbjct: 167 IPDVTKGSRTTNQVAIIYTLRCRKKSF-----EGKSLVVGVTHLKAKNGWQELRHAQGKI 221 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 L + + ++ P V GDFN + + ++ ++ + + ++ Sbjct: 222 LLEHLNKQ-SRGRPIVFCGDFNAESSEPVYSEFQNSNLNLKSTYQLLSENGNTEPEYTTW 280 Query: 251 LRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY ++ D+ SDH + D F Sbjct: 281 KIRPSGEAKHTIDYIWHSEDQLTIDALLPIPTDSQLGDERAPSYITSSDHFSLVFDLRF 339 >gi|182420508|ref|ZP_02643101.2| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens NCTC 8239] gi|182380424|gb|EDT77903.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens NCTC 8239] Length = 262 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 44/291 (15%), Positives = 94/291 (32%), Gaps = 45/291 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+ + + + W + + + K+ DI+ QE + Sbjct: 4 LKVMTFNLKYDFKAQDNNEW-------SQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMD 56 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAKDSF 137 + + + + + D AI K VL+ P + F Sbjct: 57 DLLDEYS-------WVGEDREGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDF 109 Query: 138 SRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + + R +L + +I+G KI + + HL E ++ ++ + Sbjct: 110 NSSLPRICTKLKLKDKISGLKIDIYNTHL-----DHESELAREEGIKIILKEVK------ 158 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP--KEKDSRCNANKNLRN 253 + P++I GDFN + N + + + + K Sbjct: 159 KNYEIYKTPYIIMGDFNCYLEDNLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY 218 Query: 254 KIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY + + + N DD K G SDH P+ + + Sbjct: 219 DGRIIDYILYSKE---------YEIKSLNIDDRKINGGYPSDHYPVICELE 260 >gi|254506149|ref|ZP_05118293.1| exodeoxyribonuclease III [Vibrio parahaemolyticus 16] gi|219550967|gb|EED27948.1| exodeoxyribonuclease III [Vibrio parahaemolyticus 16] Length = 268 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 82/309 (26%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQAVIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K + Q G R Sbjct: 42 -------FPLEDVEAMGYKVYFHGQKAHYGVAMLCKKEPISIQK----GFPTDNDEHQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + L + NG+K+ VL+ F + Q + L ++ + Sbjct: 91 MIMVTLEDDNGEKVTVLN-----GYFPQGDNIGHETKFPYKRQFYKDLMTYLNDHHNNDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ + +T+ + F + Sbjct: 146 QLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSFQPEERQWLQTLLDWGFVDTFRQIHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + I + D ++ S Sbjct: 206 DVNDRFSWFDYRSKGFPDNRGLRIDVVLATPKLAAKC-------IEADIDYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|332533572|ref|ZP_08409434.1| exodeoxyribonuclease III [Pseudoalteromonas haloplanktis ANT/505] gi|332036974|gb|EGI73433.1| exodeoxyribonuclease III [Pseudoalteromonas haloplanktis ANT/505] Length = 268 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 78/309 (25%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQAIIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K L G + R Sbjct: 42 -------FPLEDVQKMGYHVYFHGQKAHYGVAMLCKKEPKSV----LKGFATDTEESQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+ + V++ F + Q + L + + Sbjct: 91 MISVTVEQDNGRDLTVMN-----GYFPQGDNINHETKFPYKRQFYKDLMTHLETNHTPVQ 145 Query: 204 PFVIAGDFNRKINYLGN---------------------NDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N L ++ T+ F ++ Sbjct: 146 DVIVMGDINISPTDLDIGIGEVNAKRWLKTGKCSFQPVEREWLATLLNWGFKDTFREQNP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + I D ++ S Sbjct: 206 ETDDQYSWFDYRSKGFVDNRGLRIDVVLATNELAARCIDTGI-------DYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|326202355|ref|ZP_08192224.1| exodeoxyribonuclease III [Clostridium papyrosolvens DSM 2782] gi|325987473|gb|EGD48300.1| exodeoxyribonuclease III [Clostridium papyrosolvens DSM 2782] Length = 253 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 80/302 (26%), Gaps = 78/302 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +LVSWN+N L G W + K +DADI +QE Sbjct: 3 KLVSWNVNGLRSCIGKGFW---------------DFFKEVDADIFCVQETKLQEG-QLEL 46 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + +++ + ++ A+ K V + D+ R Sbjct: 47 EIEGYEHYWN----------YAVKKGYSGTAIFTKIKPVSSSCGIGIEEHDNEGR----- 91 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ + ++ ++++++ + + + L+ P Sbjct: 92 ----VITLEFEEFFLVNVYTPNSKRELERLEYRMKWEDDFREYLKQLEQ--------TKP 139 Query: 205 FVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 +I GD N + + + + + + F + A Sbjct: 140 VIICGDMNVAHQEIDLKNPRSNKRSAGFTMEEREKFSQLLEHGFVDTFRMLYPDKTGAYT 199 Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 IDYF + + SDHCP+ + Sbjct: 200 WWSYMFKSREKNAGWRIDYFCVSGALKDRIEAAEI-----------YSDTMGSDHCPVGL 248 Query: 301 DY 302 Sbjct: 249 TI 250 >gi|114047018|ref|YP_737568.1| exonuclease III [Shewanella sp. MR-7] gi|113888460|gb|ABI42511.1| Exodeoxyribonuclease III [Shewanella sp. MR-7] Length = 270 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 84/309 (27%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L S L+ + DI+ LQE ++ Sbjct: 1 MKIVSFNINGL----------------RSRLHQLQALIDSHQPDIIGLQETKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K + Q +D A R Sbjct: 42 -------FPLAEVEAMGYHVHYHGGKAHYGVAMLSKAAPIKVQKGFATDEED----AQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+ + VL+ F + + Q L + + Sbjct: 91 MIIGTFAQANGRPLTVLN-----GYFPQGESIDHPTKYPAKRKFYQDLMAHLHANHSNDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 I GD N ++ ++ KT+ + F + Sbjct: 146 DIAIIGDINISPIDLDIGIGEVNRKRWLKTGKCSFQPEEREWLKTLQDWGLVDTFRQLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 R + ID + + LI+ + D + S Sbjct: 206 DRSERYSWFDYRSKGFDDNRGLRIDVILATPSLAARLIES-------DVDYDLRGIDKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|329736070|gb|EGG72343.1| sphingomyelin phosphodiesterase [Staphylococcus epidermidis VCU045] Length = 327 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 42/300 (14%), Positives = 94/300 (31%), Gaps = 31/300 (10%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +++ + N+ L +++ N + +D Y + + D+V L E+ A Sbjct: 33 SKDSLKITTHNVYFLPT----AIYPNWGQSQRADLISKADYIQ--NQDVVILNELFDKKA 86 Query: 80 VAKVFPKNTWCIFYSTE-------RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 ++ + Y T N S + ++QQ + Sbjct: 87 SNRLLTRLHSQYPYQTPIVGKGTEGWQNTSGTYRKIKKVSGDVGIVSKWPIVQQEQHIYK 146 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 AGN+ + + NGK ++ HL++ + + Q +K Sbjct: 147 KGCGADMAGNKGFAYIKINKNGKYHHIIGTHLQA----EDPTCFKGKDKDIRQSQMNEIK 202 Query: 193 DWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 +I + P I GD N I ++ + ++N Sbjct: 203 QFIKDKNIPKNEPVYIGGDLNV-IKDSDEYQQMANNLNVSLPTQFDGNAYSWDTSSNSIA 261 Query: 252 RN------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPIS 299 + +DY ++D++ + + + + + + + SDH P+S Sbjct: 262 KYNYPKLEPQHLDYILLDRDHAQPSSWHNDTHRVKSPEWSVKSWGKTYKYNDYSDHYPLS 321 >gi|254464825|ref|ZP_05078236.1| exodeoxyribonuclease III [Rhodobacterales bacterium Y4I] gi|206685733|gb|EDZ46215.1| exodeoxyribonuclease III [Rhodobacterales bacterium Y4I] Length = 268 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 39/306 (12%), Positives = 85/306 (27%), Gaps = 65/306 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + L + D+V LQE+ S V + Sbjct: 1 MKIATFNING----------------IKARAQALPDWLDEAQPDVVVLQEIKS---VDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + ++ +A+ K + D +R Sbjct: 42 FPREIF-------EERGYNVETHGQKSFNGVAILSKLPLEDVRRGLPGDDSDEQARW--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLD---SLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +E V + I + ++L + ++ + + LK Sbjct: 92 --IEATVT-GKQAIRICGLYLPNGNPVELEADGSPVAGGKYAYKLAWMERLKARAEALLA 148 Query: 201 SLVPFVIAGDFNRKIN-------YLGNNDDFWKTIDPNDS-------LIRFPKEKDSRCN 246 +P ++AGD+N D ++ + + Sbjct: 149 DEMPALMAGDYNIIPQAEDAKRPEAWAEDALFRPQSRAAFQRIVNLGFTEAFRARHQGPG 208 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ ++ A L+ D ++ SDH P Sbjct: 209 HYSFWDYQAGAWNRNDGIRIDHILLTPQAADLLLDCQI-------DKDVRGREKPSDHVP 261 Query: 298 ISIDYD 303 + ++ D Sbjct: 262 VWVELD 267 >gi|115525646|ref|YP_782557.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris BisA53] gi|115519593|gb|ABJ07577.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris BisA53] Length = 256 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 74/302 (24%), Gaps = 70/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN ++ L + K+ D V LQE+ + Sbjct: 1 MKIATFNINNINN----------------RLPSLLAWLKSAKPDAVCLQELKTEQ----- 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R +S +A+ K V+ L G Sbjct: 40 -----HKFPEKALRDAGYSAVWVGQKSWNGVAILSKKNPVVVIRTRLPGDPTDSEARYVE 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 AV + + ++ + + + + L +S Sbjct: 95 GAV--------GGVVIACLYAPNGNPQPGPKFDRKLA------WMKRLHKHAGSLLKSGA 140 Query: 204 PFVIAGDFNRKINYLGNN-------DDFWKTIDPNDS-------LIRFPKEKDSRCNANK 249 P VIAGDFN L D + N + Sbjct: 141 PVVIAGDFNVAPTELDIYPTKSWNKDALIQPESRNAYAKLVGQGWTDAIRSLHPEQRIYS 200 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +D+ ++ + L++ D SDH P+ I Sbjct: 201 FWTYWRNRFERDDGLRLDHLLLSPDVAPRLVKAGV-------DRAVRARDGASDHAPVWI 253 Query: 301 DY 302 Sbjct: 254 VL 255 >gi|110805445|ref|YP_688965.1| exonuclease III [Shigella flexneri 5 str. 8401] gi|110614993|gb|ABF03660.1| exonuclease III [Shigella flexneri 5 str. 8401] Length = 268 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNMFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSLLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + F Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGVVDTFRHANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + ++ D ++ S Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|306820340|ref|ZP_07453979.1| exodeoxyribonuclease III [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551669|gb|EFM39621.1| exodeoxyribonuclease III [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 251 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 82/304 (26%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VSWN+N L + KN DAD LQE+ Sbjct: 1 MKFVSWNVNGLRAAREKGFD---------------EIFKNFDADFFCLQEIKLQEG-QID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ + ++ A+ + + G R Sbjct: 45 MDMDGYYSYWN----------YAKRKGYSGTAIFTRIEPIDV----FYGLGKEEHDDEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +V ++ + + + + L ++ Sbjct: 91 L-----ITLEYPEFYVSTVYTPNSKQELLRLDYRQEWEDEFREFFKNL--------DAKK 137 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P +I GD N + + + + F + N Sbjct: 138 PVIICGDMNVAHKEIDLKNPKTNRKNPGFTDEEREKFTLLLDAGFTDTFRYFYPDKENEY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ + L S + ++ SDHCP+S Sbjct: 198 SWWSYRFNARKNNTGWRIDYFLVSDRLQEKLTAASIHQDVF-----------GSDHCPVS 246 Query: 300 IDYD 303 ++ Sbjct: 247 VELS 250 >gi|291294670|ref|YP_003506068.1| Endonuclease/exonuclease/phosphatase [Meiothermus ruber DSM 1279] gi|290469629|gb|ADD27048.1| Endonuclease/exonuclease/phosphatase [Meiothermus ruber DSM 1279] Length = 641 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 41/345 (11%), Positives = 89/345 (25%), Gaps = 61/345 (17%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWK------------------NSVKRTTSDYTL 56 +V +R+V +N+ ++ + Sbjct: 291 ATPPAVGGTLRVVGFNLLNFFNTFDGLPDTVDNCTYGLGGAPADCRGADTPAEFDRQWPK 350 Query: 57 LRQYAKNLDADIVFLQEMGSY-----NAVAKVFP------KNTWCIFYSTERLINHSKRD 105 ++ D++ L E+ + +A+A + F + Sbjct: 351 TVAAILAMNPDVLGLNELENDGYGPDSAIAFLVNKLNEATAPGTYAFIDADAATGQVNAL 410 Query: 106 SNNDIHTAIAVRKKNVRVLQQSY-----PLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 + I + + V + Q+ + DS R A NG V Sbjct: 411 GTDAIKVGLIYKPARVTPVGQTAVLNTPAFVNGGDSAPRNRASLAQAFRQNDNGAIFIVN 470 Query: 161 DIHLKSFCFLDSLENT---YSPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKI 215 HLKS L + ++ ++ Q L W+ + ++ GD+N Sbjct: 471 VNHLKSKGSPCDLPDQGDGQGNCNAVRTRAVQQLVAWLATHPTGIADPDILLIGDYNSYA 530 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 T+ + + +DY + + + + Sbjct: 531 QEDPI-----ATLKKAGFINLLEARLGPDAYSYVFDGQWGYLDYALASASLNAQVSGVAE 585 Query: 276 SEILYNEDDIKSRG-----------------KRLSDHCPISIDYD 303 I +E ++ R SDH P+ + + Sbjct: 586 YHINADEPNVLDYNTNFKTPNLQVLLYAPDQYRTSDHDPVVVGLN 630 >gi|157374807|ref|YP_001473407.1| exonuclease III [Shewanella sediminis HAW-EB3] gi|157317181|gb|ABV36279.1| exodeoxyribonuclease III [Shewanella sediminis HAW-EB3] Length = 268 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 89/309 (28%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN + L+ + D++ LQE +++ V Sbjct: 1 MKIVSFNING----------------IRARLHQLQALIDSHQPDVIGLQETKAHDDV--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K V Q G A R Sbjct: 42 -------FPVADVEAMGYKVHYHGGKAHYGVAMLSKLEPVKVQK----GFPTDDDEAQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+ + +L+ F ++ + + L ++ + Sbjct: 91 MIMGTFTQENGRPLTILN-----GYFPQGDNISHETKYPAKRKFYKDLMVYLNEHHTPDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 I GD N ++ ++ KT+ + F + Sbjct: 146 DIAIIGDINISPVDLDIGIGAPNAKRWLKTGKCSFQPEEREWLKTLMDWGLVDTFRELHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 R + ID + ++ + L++ + D ++ S Sbjct: 206 ERSERYSWFDYRSKGFVDNRGLRIDVVLATKSLAERLVES-------DVDYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|170743018|ref|YP_001771673.1| exodeoxyribonuclease III Xth [Methylobacterium sp. 4-46] gi|168197292|gb|ACA19239.1| exodeoxyribonuclease III Xth [Methylobacterium sp. 4-46] Length = 269 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 32/306 (10%), Positives = 79/306 (25%), Gaps = 66/306 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + +WNIN L+R++ D++ LQE N + Sbjct: 3 LTVSTWNIN----------------SVRLRIDLVRRFLDEARPDVLCLQETKCPNDRFPL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + + Q+ D+ R Sbjct: 47 KELQGF---------GYPHVVFAGQKGYNGVAILSRLPLLSQEVMSFCDRPDA------R 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +L G+ ++ D + + + L+ W K Sbjct: 92 HISAVLGPEAGEAAGIVLHDFYVPAGGDVPDAALNDKFAHKLAFMDELRAW--GGKRPTG 149 Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247 P ++ GD N + + ++ + + + Sbjct: 150 PAILVGDLNVAPLEHDVWSHRQLLDVVSHTPVETERLETLRGEAGWVDTMRHLRPEPEKI 209 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + + + +R SDH P Sbjct: 210 YTWWSYRSPDWAAADKGRRLDHIWVTADLAGSVKAVTV-------ARHARAWERPSDHVP 262 Query: 298 ISIDYD 303 ++++ D Sbjct: 263 VTVELD 268 >gi|89901754|ref|YP_524225.1| exodeoxyribonuclease III [Rhodoferax ferrireducens T118] gi|89346491|gb|ABD70694.1| Exodeoxyribonuclease III [Rhodoferax ferrireducens T118] Length = 274 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 83/304 (27%), Gaps = 74/304 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ +WN+N+L+ + + + D++ LQE+ + Sbjct: 15 TMKFATWNVNSLT----------------VRLPQVLDWLQANPVDVLALQELKLTDD--- 55 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 R + + +A+ + + + G D +R+ Sbjct: 56 -------KFPVDAFRQAGYHAECFGQKTYNGVALLSREPALNVVRN-VPGFADDMARS-- 105 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + + V+ + + S + Y + + L+DW+ + + Sbjct: 106 -------ISAEVNGVRVIGAYFPNGQEPGSDKFEYKMA------WLKGLRDWVRGELLTH 152 Query: 203 VPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247 V+ GD+N + D + + L + + Sbjct: 153 PRLVLMGDYNITFDDADVWDPVGLKDTIHCTEEERYHLRALIALG-LHDSFRLFAQPEKS 211 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ + D + +R SDH P+ Sbjct: 212 YSWWDYRDFAFRRNHGLRIDHILVSDALKPLVTACVI-------DKAPRKNERPSDHAPV 264 Query: 299 SIDY 302 + Sbjct: 265 VVTL 268 >gi|152982063|ref|YP_001354787.1| endonuclease/exonuclease/phosphatase family protein [Janthinobacterium sp. Marseille] gi|151282140|gb|ABR90550.1| endonuclease/exonuclease/phosphatase family protein [Janthinobacterium sp. Marseille] Length = 264 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 41/299 (13%), Positives = 87/299 (29%), Gaps = 58/299 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++R+ ++NI+ S + L+Q ++ +D++FLQE+ + + Sbjct: 2 QLRITTYNIH----------KGVSSFGSRPRIHALKQAINSMKSDVLFLQEVQGRHDLHA 51 Query: 83 VFPKNTW------CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + W + + H A+ + + S Sbjct: 52 LKHATDWPELSQQDFLAGDSHECAYGMNAVYDHGHHGNALLSCYPILSSR-----NQNIS 106 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + +R + +V ++ IHL F +Q + L + +T Sbjct: 107 DHKYESRGILHCVVRAPEAEVHCFVIHLGLFAGS-------------RKRQTEALIEAVT 153 Query: 197 QKKESLVPFVIAGDFNRKINYLGN--------NDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + P +IAGDFN N L + ++ + + + + Sbjct: 154 SSAQKDEPLIIAGDFNDWSNDLSDELRARLGVHEVYDENLVKRGFGTYIRQLAGRGPKIQ 213 Query: 249 KNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + ES + +LSDH P+ Sbjct: 214 PARTFPAAMPFLRLDRIYVRG-----FKVESAEVLHGAI------WAKLSDHAPLVATL 261 >gi|313202112|ref|YP_004040770.1| endonuclease/exonuclease/phosphatase [Methylovorus sp. MP688] gi|312441428|gb|ADQ85534.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. MP688] Length = 250 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 84/287 (29%), Gaps = 48/287 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+ ++NI+ L + R+ +NL AD+VFLQE+ + Sbjct: 4 TLRVATFNIHKGLTSFNARLALHDQ----------REMIRNLQADVVFLQEVQDEHHGNG 53 Query: 83 V------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + T + + + K H AV + + ++ + Sbjct: 54 LRFKHWPAAGQTHFLAEACGPNYAYGKNAVYPGGHHGNAVLSRFPILQSTTHDISA---- 109 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R + + I G + I + +Q L+D+I Sbjct: 110 -HEIEQRGLLHCEIAIEGWPQTLHCICVHLGLL-----------ARWRFKQFGALRDYIH 157 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 P VIAGDFN G+ + +D + F + ++ Sbjct: 158 AVIPEDAPLVIAGDFNDWRLSAGH-----QVMDGLNMREVFEHAHGKPARSFPSMFPLFR 212 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D + F+ + SDH +S + Sbjct: 213 LDRIYVRG----------FNIHSAHVHGGPRTALT-SDHAALSAVLE 248 >gi|209695422|ref|YP_002263351.1| exonuclease III [Aliivibrio salmonicida LFI1238] gi|208009374|emb|CAQ79647.1| exodeoxyribonuclease III [Aliivibrio salmonicida LFI1238] Length = 268 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 80/309 (25%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ + D++ LQE+ +N + Sbjct: 1 MKVISFNINGL----------------RARLHQLQAIIDKHNPDVIGLQEIKVHNDM--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ H +A+ K + Q ++ R Sbjct: 42 -------FPVEAVEAMGYNVYFHGQKAHYGVAMLCKKEPISVQYGFDTDTEEHQK----R 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +G K+ V++ F + Q + L + + Sbjct: 91 MIMTTHERDDGSKVTVMN-----GYFPQGDSIKHETKFPYKRQFYKDLMIHLNTHHTNDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 +I GD N ++ ++ + + F Sbjct: 146 ELIIMGDINISPIDADIGIGEPNAKRWLRTGKCSFQPEEREWLQALKDWGFEDTFRNLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + + D ++ S Sbjct: 206 EVTDQFSWFDYRSKGFVDNRGLRIDVVMATPSLAGKCTEAGI-------DYELRAIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|119469281|ref|ZP_01612220.1| exonuclease III [Alteromonadales bacterium TW-7] gi|119447145|gb|EAW28414.1| exonuclease III [Alteromonadales bacterium TW-7] Length = 268 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 78/310 (25%), Gaps = 72/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ + Sbjct: 1 MKVISFNINGL----------------RARLHQLQAVIDKHQPDVIGLQEI---KVHDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + + H +A+ K L G + R Sbjct: 42 FPLD-------DVQKMGYHVYFHGQKAHYGVAMLCKKEPKSV----LKGFATDTEESQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+ I V++ F + Q + L + Sbjct: 91 MISVTIEQDNGRDITVMN-----GYFPQGDNINHETKFPYKRQFYKDLMTHLDTNLTPDQ 145 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 V+ GD N + T+ F + Sbjct: 146 DVVVMGDINISPTDLDIGIGEVNAKRWLKTGKCSFQPEERQWLSTLLDWGFKDTFRELYP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q+ + I D + S Sbjct: 206 DVNDQYSWFDYRSKGFLDNRGLRIDVVLATQSLAERCIDSGI-------DYELRAIDKPS 258 Query: 294 DHCPISIDYD 303 DH PI + Sbjct: 259 DHAPIWSTFT 268 >gi|212692517|ref|ZP_03300645.1| hypothetical protein BACDOR_02013 [Bacteroides dorei DSM 17855] gi|212664928|gb|EEB25500.1| hypothetical protein BACDOR_02013 [Bacteroides dorei DSM 17855] Length = 276 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 81/309 (26%), Gaps = 71/309 (22%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K + L L +A +RL+++NI + + V D+ + Sbjct: 30 MKKTLPLLFILLFALSAQSQNSLRLMTYNIKNANGMDDVC-----------DFQRIADVI 78 Query: 62 KNLDADIVFLQEMGSYN-------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 ++ ++V LQE+ S + ++ + +++ + I Sbjct: 79 NHIHPEVVALQELDSMTHRSGQKYVLGEIAGRTQMHAYFAP--------AIDYDGGKYGI 130 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + K + V ++ L G R R + + + Sbjct: 131 GLLTKEIPVSLKTMTLPG------REEARALIMAEFDN-------YIYCCTHLSLTEEDR 177 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 L+ PF +AGD N + Sbjct: 178 -------------MASLELIKDFAAAHKKPFFLAGDLNAEPESAFIKYL----------Q 214 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 F D + IDY + K S + SD Sbjct: 215 QDFQILSDVNQHTFPAPSPTETIDYITALKQNMKGFTVTSAQVVNEPV---------ASD 265 Query: 295 HCPISIDYD 303 H P+ I + Sbjct: 266 HRPLVIVLE 274 >gi|134296326|ref|YP_001120061.1| exodeoxyribonuclease III [Burkholderia vietnamiensis G4] gi|134139483|gb|ABO55226.1| Exodeoxyribonuclease III [Burkholderia vietnamiensis G4] Length = 271 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 31/300 (10%), Positives = 80/300 (26%), Gaps = 68/300 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + AD++ LQE Sbjct: 14 MKIATWNVNSLN----------------VRKQHVLDWLAQSGADVLCLQE---------- 47 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + +A+ ++ + +S + Sbjct: 48 LKLPDEKYPRADLEAVGYRSWFTGQKTYNGVAILVRDTLAVDESDVVRNIPGFDDPQQRV 107 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 AV + + ++ + + DS + Y Q L W+ + + Sbjct: 108 VAVTVE------GVRIVSAYFPNGQAPDSDKFLYK------MQWLDALHAWLGAELQRYP 155 Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249 + GD+N +D + P + + + Sbjct: 156 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAKLLELGFVDAFRRFEQPEKTFT 215 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ D + ++ SDH P+ Sbjct: 216 WWDYRMFAFRRNAGLRIDHILLSPALAATCTSCEV-------DRVPRTWEQPSDHTPVVA 268 >gi|118592059|ref|ZP_01549453.1| exodeoxyribonuclease III [Stappia aggregata IAM 12614] gi|118435355|gb|EAV42002.1| exodeoxyribonuclease III [Stappia aggregata IAM 12614] Length = 269 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 82/309 (26%), Gaps = 70/309 (22%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +++LV+WNIN ++ Q + D++ LQE +A Sbjct: 2 TDRIKLVTWNIN----------------SVRLRMPIVEQLIDEVAPDVICLQETKCPDA- 44 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + R + + +A + + DS Sbjct: 45 ---------NFPENAFRKAGYEHMAIHGQKGYHGVATLSRLPLSNIEKRDFCQVGDSRH- 94 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 V + V NG I + + ++ + D + T +P + W+ ++ Sbjct: 95 ------VAVDVPFNGSSIRLHNFYVPAG--GDEPDRTINPKFGHKLDFMNEMLGWLKGEE 146 Query: 200 ESLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + P ++ GD N + + F + + L + Sbjct: 147 TAK-PAILVGDLNVAPYEHDVWSHKKLLKVVSHTPVETELFEQVREAGGWLDAMRQFTPL 205 Query: 244 RCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + +D+ + Q ++ S Sbjct: 206 DEKLYTWWSYRAKDWSAADKGRRLDHVWVSQPLAP-------HVKGTTVLRDARGWEKPS 258 Query: 294 DHCPISIDY 302 DH P+ ++ Sbjct: 259 DHAPVIAEF 267 >gi|260772508|ref|ZP_05881424.1| exodeoxyribonuclease III [Vibrio metschnikovii CIP 69.14] gi|260611647|gb|EEX36850.1| exodeoxyribonuclease III [Vibrio metschnikovii CIP 69.14] Length = 270 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 83/309 (26%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L+ DI+ LQE+ ++ Sbjct: 1 MKIVSFNINGL----------------RARLHQLQALIDKHQPDIIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K + Q G R Sbjct: 42 -------FPVQAVEAMGYHVYFHGQKAHYGVALLCKKAPLEVQK----GFPTDNDDHQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ NG K+ VL+ F + Q Q L +++T Sbjct: 91 MIIGTFLDENGDKVTVLN-----GYFPQGDNIHHETKFPYKRQFYQDLMNYLTDYHTPDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ + + + F K Sbjct: 146 AIIVMGDINISPIDLDIGIGEVNRQRWLKTGKCSFQPEERQWLQRLLDWGLEDTFRKLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 S + + ID + + ++ + D ++ S Sbjct: 206 SVEDKFSWFDYRSRGFDDNRGLRIDTILATPSLAIDCVES-------DIDYPLRAIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWAVF 267 >gi|89055306|ref|YP_510757.1| exodeoxyribonuclease III [Jannaschia sp. CCS1] gi|88864855|gb|ABD55732.1| Exodeoxyribonuclease III [Jannaschia sp. CCS1] Length = 261 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 80/303 (26%), Gaps = 69/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NIN + L + D+ LQE+ S + Sbjct: 2 MRIATFNING----------------VKARIGALGDWLDEAKPDVALLQEIKSVDE---- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ +A+ K D +R Sbjct: 42 ------NFPREMLEDRGYTVETHGQKGFNGVAILSKLPLEDVSRGLPGDDTDEQARW--- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E V + + + V ++L + + Y + + + S + Sbjct: 93 --IEATVMGDTQAVRVCGLYLPNGNPTPGPKYDYKLA------WMERMHRHAQGLLASEM 144 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGD+N + ++ + F + Sbjct: 145 PVVMAGDYNIIPQDADAARPEVWQDDALARSESRAAFRRLLALGFTEAFRARNQAP-GMY 203 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ A L + + + D + SDH P+ Sbjct: 204 SFWDYQAGAWNKNDGIRIDHHLLSPEAADLLQECWIEKDVRGRD-------KPSDHVPVW 256 Query: 300 IDY 302 ID Sbjct: 257 IDL 259 >gi|313125896|ref|YP_004036166.1| metal-dependent hydrolase [Halogeometricum borinquense DSM 11551] gi|312292261|gb|ADQ66721.1| metal-dependent hydrolase [Halogeometricum borinquense DSM 11551] Length = 283 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 37/294 (12%), Positives = 73/294 (24%), Gaps = 48/294 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 VR++S+N+ ++ +G W + + + D+V LQE + A Sbjct: 19 PVRVLSFNVRYDTDDDGPDAWPHRRDDA-------VRLVRYHRPDVVCLQEPLKHQLDAF 71 Query: 83 VFPKNTWCIFYSTERLIN--------------HSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + + N + + + + Sbjct: 72 RDGLDEYEWVAVPRTGGNAADATDSKETDDAASTGESVPVGYDASRFSLEDSETFWLSET 131 Query: 129 PLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 P + R ++ +G+ V +HL + L + Sbjct: 132 PEEPGSVGWDATLPRILTRATLQGESGETFHVASVHL-----DNDGVKARLEGAKLARDR 186 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 L P ++AGD N + D + + Sbjct: 187 LAQL----------DGPVILAGDCNATPDSDPYEAVTEAFADARHVAKHGHHGPEKTMHH 236 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + + L ++R SDH P+ D Sbjct: 237 F-TGDPTERIDYVFVRE----------CDVRLSATLADRTREGYPSDHFPVVAD 279 >gi|290242949|ref|YP_003494619.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix] gi|288945454|gb|ADC73152.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix] Length = 361 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 49/305 (16%), Positives = 103/305 (33%), Gaps = 29/305 (9%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 ++R+ A++ ++ +A++A +RL SWNI L G DY + + Sbjct: 4 LLRRGAFAILLIVLLPSAALAD-LRLASWNIQHLGWNVG------------KDYPAVARI 50 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 A D + +QE+ + + ++ L + + + A R+ Sbjct: 51 AAQF--DFLAIQEVMNAEGIYRLRDTLEDATGAEWSVLYSDALGRNTYREKYAFLWREAA 108 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 V + + + D F+ R + G L + Sbjct: 109 VEYVGGALTYIDEADRFA----REPFSAVFRSRGTDQHFLAATVHITYGD--RVADRVEE 162 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG--NNDDFWKTIDPNDSLIRFP 238 L + WL D + + ++ GDFN ++ G + + + + Sbjct: 163 IEALRRYWDWLADVMPEYAGER---ILFGDFNLPPHHDGWASMRAVAEPLVTEGATTLST 219 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ++ AN +P D+ + +A SE+ D + R+SDH P+ Sbjct: 220 HDRR---YANLYDNLWVPKDHTLPLGDAGILPFPVVLSEVTGVYWDHEKARDRVSDHAPV 276 Query: 299 SIDYD 303 + ++ Sbjct: 277 YVLFE 281 >gi|21111415|gb|AAM39749.1| nuclease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572117|gb|AAY47527.1| nuclease [Xanthomonas campestris pv. campestris str. 8004] Length = 1131 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 41/340 (12%), Positives = 96/340 (28%), Gaps = 54/340 (15%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69 P A V + ++N+ + + + +N DI+ Sbjct: 516 PAPRPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNYLHTPDIL 575 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK-----KN 120 E+ + + + + + + ++ + + + I V+ Sbjct: 576 GTVEVENISVLQTLAARINADAVAAGQQDPKYVAYLQEGNDVGGIDVGFLVKTADVSGGV 635 Query: 121 VRVLQQSYPLLGAKDSFSRAGN-------RRAVEL---LVEINGK--KIWVLDIHLKSFC 168 RV S G +++ G R + L + + +G+ + + +H +S Sbjct: 636 PRVEVVSVAQEGKATTWTEPGGAVSLLNDRPPLVLSTRVHQADGRVLPLTTIVVHQRSLN 695 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 ++ + + + QA +L + Q+ + ++ GDFN G D Sbjct: 696 GAETDDAAGTRIRAKRQAQASYLARLLQARQQLDPAERVLVMGDFNAFEFNDGYVDAMGT 755 Query: 227 T------------------IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 + D + + N +D+ + + + Sbjct: 756 VTGKPAADAQTVVSGDGIDLVDPDYTDLTWFNTPDQSYSYAFDGNVQSLDHILANDALMR 815 Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300 S S + RLSDH P + Sbjct: 816 ASNIASLSVGHARINADFPGTARNDANTPTRLSDHDPTVV 855 >gi|77747746|ref|NP_635825.2| nuclease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|77761085|ref|YP_241547.2| nuclease [Xanthomonas campestris pv. campestris str. 8004] Length = 1193 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 41/340 (12%), Positives = 96/340 (28%), Gaps = 54/340 (15%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69 P A V + ++N+ + + + +N DI+ Sbjct: 578 PAPRPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNYLHTPDIL 637 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK-----KN 120 E+ + + + + + + ++ + + + I V+ Sbjct: 638 GTVEVENISVLQTLAARINADAVAAGQQDPKYVAYLQEGNDVGGIDVGFLVKTADVSGGV 697 Query: 121 VRVLQQSYPLLGAKDSFSRAGN-------RRAVEL---LVEINGK--KIWVLDIHLKSFC 168 RV S G +++ G R + L + + +G+ + + +H +S Sbjct: 698 PRVEVVSVAQEGKATTWTEPGGAVSLLNDRPPLVLSTRVHQADGRVLPLTTIVVHQRSLN 757 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 ++ + + + QA +L + Q+ + ++ GDFN G D Sbjct: 758 GAETDDAAGTRIRAKRQAQASYLARLLQARQQLDPAERVLVMGDFNAFEFNDGYVDAMGT 817 Query: 227 T------------------IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 + D + + N +D+ + + + Sbjct: 818 VTGKPAADAQTVVSGDGIDLVDPDYTDLTWFNTPDQSYSYAFDGNVQSLDHILANDALMR 877 Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300 S S + RLSDH P + Sbjct: 878 ASNIASLSVGHARINADFPGTARNDANTPTRLSDHDPTVV 917 >gi|85375417|ref|YP_459479.1| hypothetical protein ELI_12950 [Erythrobacter litoralis HTCC2594] gi|84788500|gb|ABC64682.1| hypothetical protein ELI_12950 [Erythrobacter litoralis HTCC2594] Length = 262 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 36/302 (11%), Positives = 84/302 (27%), Gaps = 66/302 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NIN + L ++ + + LQE+ S Sbjct: 1 MRIATFNING----------------IKARLPRLIEWLEETRPTVACLQEIKSQ---DDG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + I + +A+ V+ + L Sbjct: 42 FPADEF-------EKIGYHAIWHGQKSFNGVAILADGVKPEETQRGLGVDGPKEGEGEQA 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R +E V + + ++L + + Y + + L+ + + +S Sbjct: 95 RYLEAHVN----GVRIACLYLPNGNPHPGPKFDYKLA------WMEKLRARMRELWQSEQ 144 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GDFN + + D + + + + Sbjct: 145 PTIVTGDFNVIPHDDDVWSPKAMQDDALMQPESRDAYQRQLADGWTDAVRTLNPRGGVWT 204 Query: 248 NKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + ID+ ++ L D ++ SDH P+ + Sbjct: 205 FWDYQRGAWQRDHGFRIDHCLLSPELADRLTAVGV-------DKDYRGREKASDHTPVWV 257 Query: 301 DY 302 + Sbjct: 258 EL 259 >gi|49082844|gb|AAT50822.1| PA2545 [synthetic construct] Length = 271 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 38/312 (12%), Positives = 78/312 (25%), Gaps = 76/312 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L + D++ LQE Sbjct: 1 MKIVSFNINGL----------------RARPHQLAALIERHQPDVIGLQE---TKVADDQ 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + + H +A+ + + ++S R Sbjct: 42 FPQ-------AEIEALGYHVHYHGQKGHYGVALLSRQAPLELHRGFPSDGEES-----QR 89 Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + G I V++ F + + L+ + + Sbjct: 90 RFIWGTFSDAQGNPITVMN-----GYFPQGENREHPTKFPAKQRFYADLQSLLENSFKPE 144 Query: 203 VPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 V+ GD N L ++ T+ + F Sbjct: 145 QALVVMGDINISPGDCDIGIGEENRKRWLKTGKCSFLPEEREWLATLKNWGLVDSFRALN 204 Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + + D + Sbjct: 205 PEVNDRFSWFDYRSRGFEDNPKRGLRIDVILASRVLQPRFKDAGI-------DYDLRGME 257 Query: 291 RLSDHCPISIDY 302 + SDH PI ++ Sbjct: 258 KPSDHAPIWLEL 269 >gi|30062986|ref|NP_837157.1| exonuclease III [Shigella flexneri 2a str. 2457T] gi|30041235|gb|AAP16964.1| exonuclease III [Shigella flexneri 2a str. 2457T] gi|281600889|gb|ADA73873.1| Exonuclease III [Shigella flexneri 2002017] gi|313649224|gb|EFS13658.1| exodeoxyribonuclease III [Shigella flexneri 2a str. 2457T] gi|332758722|gb|EGJ89041.1| exodeoxyribonuclease III [Shigella flexneri 2747-71] gi|332759186|gb|EGJ89495.1| exodeoxyribonuclease III [Shigella flexneri K-671] gi|332762505|gb|EGJ92770.1| exodeoxyribonuclease III [Shigella flexneri 4343-70] gi|332767178|gb|EGJ97373.1| exodeoxyribonuclease III [Shigella flexneri 2930-71] gi|333004385|gb|EGK23916.1| exodeoxyribonuclease III [Shigella flexneri K-218] gi|333006836|gb|EGK26333.1| exodeoxyribonuclease III [Shigella flexneri K-272] gi|333018389|gb|EGK37688.1| exodeoxyribonuclease III [Shigella flexneri K-304] gi|333018754|gb|EGK38047.1| exodeoxyribonuclease III [Shigella flexneri K-227] Length = 268 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSLLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + F Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGVVDTFRHANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + ++ D ++ S Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|170717538|ref|YP_001784627.1| exonuclease III [Haemophilus somnus 2336] gi|168825667|gb|ACA31038.1| exodeoxyribonuclease III [Haemophilus somnus 2336] Length = 267 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 89/311 (28%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + + D++ LQE + + Sbjct: 1 MKFISFNINGL----------------RARPHQLDRIVEKYQPDVIGLQEIKVSDEDFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + I++ H +A+ K + + +++ R Sbjct: 45 NLVEHLGYHIYHH------------GQKGHYGVALLLKQEPKVIRRGFSTDDENAQKR-- 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +E + + V++ F + + L+ ++ Q+ + Sbjct: 91 ---IIMADLETDFGLLTVIN-----GYFPQGENRQHETKFPAKEKFYADLQHYVEQEHDR 142 Query: 202 LVPFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKE 240 P +I GD N L ++ + + F + Sbjct: 143 NNPILIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWINRLYNYGLIDTFRHK 202 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + ID+ +++Q + + ++ Sbjct: 203 NPTINDQFSWFDYRSKGFDDNRGLRIDHILVNQLLLERCVDAGI-------AFDIRAMEK 255 Query: 292 LSDHCPISIDY 302 SDH PI ++ Sbjct: 256 PSDHAPIWAEF 266 >gi|299067973|emb|CBJ39187.1| putative metal dependent endonuclease/phosphatase [Ralstonia solanacearum CMR15] Length = 248 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 95/286 (33%), Gaps = 49/286 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA---V 80 +R+ ++NI+ + +RQ +DADIVFLQE+ N Sbjct: 4 LRVATYNIH----------KGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVA 53 Query: 81 AKVFPKNT---WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A++F + + + + + H A+ + +L ++ + S Sbjct: 54 AELFDPHYTQLRYLATDVYPHTVYGRNAVYDHGHHGNAILSRYPILLSENLDI-----SD 108 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R R + + ++ ++ +L H F +QA+ L + + Sbjct: 109 HRFEQRGLLHAVADLGFGEVHLLCAHFGLF-------------ARSRRRQAEALIERVCS 155 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 + P V+AGDFN N L +++ + + + + + + Sbjct: 156 VVPTDAPLVVAGDFNDWNNRLD--RVICQSLGVTEVADKAVSAR--PLRTFPSHLPWLRL 211 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + F + + +R SDH P+ + Sbjct: 212 DRIYVRG----------FEIDRAHALTGRDWAQR-SDHVPLLAELS 246 >gi|149369522|ref|ZP_01889374.1| hypothetical protein SCB49_06842 [unidentified eubacterium SCB49] gi|149356949|gb|EDM45504.1| hypothetical protein SCB49_06842 [unidentified eubacterium SCB49] Length = 311 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 31/316 (9%), Positives = 82/316 (25%), Gaps = 50/316 (15%) Query: 25 RLVSWNINTLSEQ-------EGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--------- 68 + +N+ L + + + + + Q + I Sbjct: 5 TIAFYNLENLFDTVNDPKKMDETFTPRGAARWNEQKLEAKVQMLGAVIPTIGQADNPFAP 64 Query: 69 --VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV-RVLQ 125 + + E+ + + ++ + + I TA+ R + Sbjct: 65 VLIGVAEVENATVLKQLVKVEPLKDLGYSFVHFDSPDE---RGIDTALLYRSSFFKVIES 121 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 ++ +L + R + ++ E+ G+++ VL H S + ++ Sbjct: 122 KAVHVLIETEKGHPDLTRDILHVVGELEGQRVHVLVNHWPSKRAGEKETAYKR---MEVA 178 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 Q + + I + + +I GDFN + L+ + Sbjct: 179 NQNRAVITEIKKTEP-DARIIIMGDFNDDPQSDSISQLVGTDFYNPMELLLTRDD----- 232 Query: 246 NANKNLRNKIPIDYFVMDQNA-------------------YKFLIQESFSEILYNEDDIK 286 + D ++ N + + + Sbjct: 233 GSTNYRGKWNLFDQILVSNNFMKPYDNPFTFEKAAIFNSDAVVIQDGDYKGNPFRTYAGP 292 Query: 287 SRGKRLSDHCPISIDY 302 +SDH P+ + Sbjct: 293 KYLGGVSDHFPVYAVF 308 >gi|84499578|ref|ZP_00997866.1| extracellular nuclease [Oceanicola batsensis HTCC2597] gi|84392722|gb|EAQ04933.1| extracellular nuclease [Oceanicola batsensis HTCC2597] Length = 1215 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 93/358 (25%), Gaps = 75/358 (20%) Query: 16 CTASVAQKVRLVSWNINTLS-----------EQEGVSLWKNSVKRT-------TSDYTLL 57 V R+ S N+ L + + ++ R + Sbjct: 712 TPEEVDGNFRVASMNVLNLFSTLDTNPGSNNGPDVIGPDGDTEPRGANSEAEFQRQLDKI 771 Query: 58 RQYAKNLDADIVFLQEMGSY------------------NAVAKVFPKNTWCIFYSTERLI 99 +DA+I L E+ + + + + + Sbjct: 772 VNAIVAMDANIFGLVEIENDFLGAGGVSPEEGATSLGDPTIQVLVDAVNAALGDEVFGWV 831 Query: 100 NHSKRDSNND-IHTAIAVRKKNV-------RVLQQSYPLLGAKDSFSRAGNRRAVELLVE 151 + + D I A+ R V + + R NR A+ E Sbjct: 832 DPGQEFVGGDAISNALIYRTDRVALVGEMAILEEFEGRSFYDPLGAGRPLNRPAIAQTFE 891 Query: 152 I--NGKKIWVLDIHLKSFCF------LDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202 +G+ + V HLKS D+ + + + A+ L DW+ Sbjct: 892 DLNSGETLTVSVNHLKSKGSLSGLEADDAQGDGQGNNNATREAAAEMLSDWLATDPTGQG 951 Query: 203 -VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 +I GD N D + + + +DY + Sbjct: 952 AENVLILGDLNSYAREDPIKAL------QADGYVDLGHAANPDAYSYVFDGQVGTLDYAL 1005 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGK---------------RLSDHCPISIDYDF 304 + ++ + I +E D R SDH P+ + +DF Sbjct: 1006 ANGALFEDFAGATEWNINSDEADALDYNLDFGKDPSLYTGDTATRYSDHDPVIVGFDF 1063 >gi|255008849|ref|ZP_05280975.1| putative transmembrane endonuclease/exonuclease/phosphatase family protein [Bacteroides fragilis 3_1_12] gi|313146594|ref|ZP_07808787.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313135361|gb|EFR52721.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 361 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 86/304 (28%), Gaps = 68/304 (22%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + +++ ++N+++ ++ + +Y + DIV LQE + Sbjct: 100 GRTLKIATYNVDSFGNEQSGYSC-----------KEIAKYMEEHQVDIVCLQEFAANRYF 148 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +NT+ + IA+ K + +++ Sbjct: 149 TADSIRNTFANWQYVIIPQAPDSISILQ-----IALFSKYPVKDSKLITYPDSRNCS--- 200 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP--------------------- 179 + ++++G+ + V + HL++ + Sbjct: 201 -----MWCDLDVDGQTVRVFNNHLQTTEVSQNKRRLERELAKNELTGREEAVARQLLEGL 255 Query: 180 --SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + + QA+ L+ I + P ++ GDFN + + + F Sbjct: 256 NENFRKRAAQAKTLEQLIRT---TPYPILVCGDFNSLPSSYTYSTVKGDNLQDG-----F 307 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + + IDY + D SDH P Sbjct: 308 QTCGHGYMYTFRYFKRLLRIDYIFHSKEFK-------------GVDYYSPDLDLCSDHNP 354 Query: 298 ISID 301 + ++ Sbjct: 355 VVME 358 >gi|149370646|ref|ZP_01890335.1| endonuclease/exonuclease/phosphatase family protein [unidentified eubacterium SCB49] gi|149356197|gb|EDM44754.1| endonuclease/exonuclease/phosphatase family protein [unidentified eubacterium SCB49] Length = 350 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 98/327 (29%), Gaps = 64/327 (19%) Query: 1 MIRKYVLALVFFLVPCTASVA---------------QKVRLVSWNINTLSEQEGVSLWKN 45 M +K++L+ V ++ + ++++S+N++ + + Sbjct: 64 MRKKFMLSAVIIVLAFLQFNSFYKFSSDAISEENYKHTLKVLSYNVHLFNSYHFKDFDAS 123 Query: 46 SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105 + K DI+ LQE + V + F + + Sbjct: 124 EK--------KFNEIVKAYQPDILSLQEYSDADDPKIVGYPYKYVHFKT-----KAVRNG 170 Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 N + A+ K + + ++ A ++ + + + + + V ++HLK Sbjct: 171 VNLKYYLGHAIYSKYPIINKGAFDFENAINNT--------LFVDIVKDKDTVRVYNLHLK 222 Query: 166 SFCFLDSLENTYS--------PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 SF S+ QA + + K +S P +I GDFN Sbjct: 223 SFGISPSISKLQEGDKKKLLGRMSQSFKDQAIQVSAILDHKNKSNYPSIITGDFNNTAFS 282 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 N+ D + ++ ID+ + E Sbjct: 283 YVYNELT------EDMNDAYIEQGSGLGTTYSFDGFPFRIDFILA--------------E 322 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ + + SDH PI + Sbjct: 323 KYFDILSFTTIKETFSDHHPILSTLGW 349 >gi|149198151|ref|ZP_01875198.1| hypothetical protein LNTAR_15857 [Lentisphaera araneosa HTCC2155] gi|149138753|gb|EDM27159.1| hypothetical protein LNTAR_15857 [Lentisphaera araneosa HTCC2155] Length = 336 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 96/313 (30%), Gaps = 28/313 (8%) Query: 1 MIR---KYVLALVFFLVPCTASV----AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD 53 M R K++ L + + V ++++N+ + E K+SV R Sbjct: 1 MKRGSAKFIFLLATVFPIVVQAQIKLKPESVSILAYNLYNYNPSESSYQLKSSVSR---- 56 Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 +DADIV L E+G +++ ++ + T ++ Sbjct: 57 -QATANVIAQIDADIVLLSELGHGDSLDELLKDLAERQVHYTF---KSIVEGPDSLRRLC 112 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 I + V+V ++ K A + N K+ + HLKS Sbjct: 113 ILAKFPPVKVDHRTRVKFKLKSEEVFVSRGFAYCIFEWQNSYKLHFIGAHLKSKIPTPLG 172 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + + Q +L D I +K+ ++AGD N + + ++ Sbjct: 173 QTDMRRYEAR---QLHYLVDEILKKEPEAN-IIVAGDMNDTFDSSPIKEIQYRRYKAEKR 228 Query: 234 LIRFPKEKDSR---CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 L S + IDYF + ++ Sbjct: 229 LYDLRPYDKSHASWTHYYDKSDEYSRIDYFFSSYAMLSEINYDTLVI------PHSPHWF 282 Query: 291 RLSDHCPISIDYD 303 SDH P+ + + Sbjct: 283 IASDHRPMLLSFT 295 >gi|84497619|ref|ZP_00996441.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Janibacter sp. HTCC2649] gi|84382507|gb|EAP98389.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Janibacter sp. HTCC2649] Length = 262 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 33/303 (10%), Positives = 76/303 (25%), Gaps = 66/303 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 VR+ +WN+N S + + + D D++ +QE Sbjct: 2 VRIATWNVN----------------SIRSRIDRVEAWLERTDVDVLAIQETKCREE---- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ +A+ + G D Sbjct: 42 ------QFPFDRFEALGYAVAHHGLSQWNGVAIASRVGLDDVSR----GFPDVPHWGEPA 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + I + +++ + L+ Y + + L+ Sbjct: 92 VAEARAIGATCNGIRLWSLYVPNGRALEDPHMHYKLA------WLEQLRVQTAAWAAEGQ 145 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF + GD+N ++ + Sbjct: 146 PFALMGDWNIAPQDEDVWSMDYYLDKSHVSPPERAAFQAVLDAGVSDVVRPHTPEPGTFT 205 Query: 249 KNLRNK--------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + ID+ + + + + D + +GK SDH P+ I Sbjct: 206 YWDYQRLAFQKRRGMRIDFILASDPLAQRVRGAAI-------DREERKGKGASDHAPVVI 258 Query: 301 DYD 303 + + Sbjct: 259 EVE 261 >gi|28900670|ref|NP_800325.1| hypothetical protein VPA0815 [Vibrio parahaemolyticus RIMD 2210633] gi|28809050|dbj|BAC62158.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] Length = 324 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 52/318 (16%), Positives = 103/318 (32%), Gaps = 30/318 (9%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFL 71 T S ++ V+ N+ S ++ + + L+ DI+ L Sbjct: 5 ANTLSQPSRITFVTANLFNFVAPPNAYYDFENIYSQEQWRDKLAWTQNQLEKLEPDIIGL 64 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP-- 129 QE+ S F + +++T + AIA R V + + Sbjct: 65 QEVFSIEETRAYFLSLGFP-YFATVDTPKIEDEYIYSRPVVAIASRFPIEDVKRVEFDSN 123 Query: 130 -LLGAKDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLD-------SLENTYSPS 180 L + + +R+ + +V I + HLKS D S S Sbjct: 124 SLTPFGVNEAPDFSRKPIYAQVVHPVLGHIAIYVTHLKSQRPADTETPEPSSRVMARWLS 183 Query: 181 CSLLSQQAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 +A L+D + Q + +P V+ GD N+ I+ N+ +T + + ++ Sbjct: 184 TQQRGWEAAMLRDAMQAQYRAHPIPTVLMGDMNQPISKESVNNVLTETFSDSVTELQLKD 243 Query: 240 EKDSRCN--------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK----- 286 + + + + +DY ++ Q I Y + Sbjct: 244 GWNLQTGSSLEVRPATHYHFSTGNVLDYILLSQEFDTHSDISVAEVIDYQVLEQHLINPS 303 Query: 287 -SRGKRLSDHCPISIDYD 303 + K SDH +S+ + Sbjct: 304 YEKDKNASDHAFVSLTVE 321 >gi|94985077|ref|YP_604441.1| endonuclease/exonuclease/phosphatase [Deinococcus geothermalis DSM 11300] gi|94555358|gb|ABF45272.1| Extracellular nuclease containing Fibronectin III domain [Deinococcus geothermalis DSM 11300] Length = 1266 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 87/325 (26%), Gaps = 47/325 (14%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT--SDYTLLRQYAKNLDADIVFL 71 + V ++R+ N+ G S + + + L AD++ L Sbjct: 673 LAAPKPVGGRLRVAGANVLNYFTTFGGSTDRGANNAYEFERQQAKIVSTLLGLKADVISL 732 Query: 72 QEMGSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 E+ + A+ + T + K ++ I AI + P Sbjct: 733 MEIQNNGGAALENLVAALNKEAGAGTYAAVKTGKLGTD-AITVAILYKP------ASVTP 785 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKK--IWVLDIHLKSFCFLDSLENTYSP---SCSLL 184 + + +R V NG V+ H KS + +T Sbjct: 786 VGSFLTDTAAINDRPPVAQTFRENGTGEVFSVIANHFKSKGSCPASGDTDQGQGCWNQKR 845 Query: 185 SQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 QAQ L +++ Q ++ GD N + +T+ + Sbjct: 846 VAQAQELLNFVQTVQTAAGDPDVLLLGDLNAYGDEDPI-----RTLVGGGFESLNRRIPA 900 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------------- 289 + + +D+ + + + + +E Sbjct: 901 EDRYSYQFGGQFGYLDHALASAALSGQVTGITEWHVNSDEPTFLDYNVEYKNNPNCTSSS 960 Query: 290 -----------KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 961 CTTPDLYQPDAFRSSDHDPVLVGLN 985 >gi|323705197|ref|ZP_08116773.1| Endonuclease/exonuclease/phosphatase [Thermoanaerobacterium xylanolyticum LX-11] gi|323535623|gb|EGB25398.1| Endonuclease/exonuclease/phosphatase [Thermoanaerobacterium xylanolyticum LX-11] Length = 231 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 89/284 (31%), Gaps = 58/284 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++NI+ + EG + + + DIV LQE+ + + Sbjct: 3 IKVMTYNIHGGKDIEGNLTLYG-----------ISNLIREIGVDIVGLQEVDVFLKRSYF 51 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + V ++++ + + R Sbjct: 52 LNEIKYLAKRLKMHYAFGPNLRIGFGSF-GNGILSRYPIVKKKNHHIYS------KGERR 104 Query: 144 RAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + L+++N KKIW L HL + Q+Q + ++ + Sbjct: 105 GVLTALIQLNENKKIWFLTTHLGL-------------NRKERLVQSQEILKIVSNLE--- 148 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 P ++ GDFN + + ++S + + + IDY + Sbjct: 149 YPVIMTGDFNETPGE-EAYSTIIRVLKD------AVNTQNSAFHTYVDGCENVRIDYIMH 201 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY--DF 304 + + IK+ LSDH P+ DF Sbjct: 202 SKGMR--------------VESIKAIDSTLSDHLPVVASLRCDF 231 >gi|255264183|ref|ZP_05343525.1| endonuclease/exonuclease/phosphatase [Thalassiobium sp. R2A62] gi|255106518|gb|EET49192.1| endonuclease/exonuclease/phosphatase [Thalassiobium sp. R2A62] Length = 341 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 41/340 (12%), Positives = 90/340 (26%), Gaps = 60/340 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTT--------SDYTLLRQYAKNLDADIVFLQEMG 75 +R+ ++N+ S + R + + Q + LDAD V + E Sbjct: 1 MRIATYNVEWFSNLFDGVGEMLADDRWSGRRDVTRSQQLAAVGQVFQALDADAVMIIEAP 60 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 +A + R N + + Sbjct: 61 DSHAKRDGLAALETFAAHFGLRASKAMTGFVNETQQEISLLYDPTQLSATHDPIGDESSK 120 Query: 136 SFSRAGNRRAVELLVEIN-----------------------GKKIWVLDIHLKSFCFLDS 172 + S R +++N G+ + ++ +H KS + Sbjct: 121 AGSGDAPRFDSVFRIDLNVDRAPDQVRFSKPPLEVELKSKSGRVVRLIGVHAKSKAPHGA 180 Query: 173 LENTY--SPSCSLLSQQAQW---LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK- 226 S + +Q ++ + Q + ++ GDFN F + Sbjct: 181 KNAAKVMQISIANRRKQLAQCIWIRQRVDQHLDRKDSVIVLGDFNDGPGLDSYEKLFGRS 240 Query: 227 -------------TIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAY- 267 DP+ + + + ++ +DY ++ + Sbjct: 241 GVEIVLGEDDPVQLFDPHAKMALTQRIGAAPTSSRFFLRHENRYLSALLDYIMVSPDLAE 300 Query: 268 ---KFLIQESFSEILYNEDDIKSRG-KRLSDHCPISIDYD 303 + I F + D SDH P+++D + Sbjct: 301 LAPSWHIWHPFEDPACWGDVELRDALLTASDHFPVTLDIE 340 >gi|186684269|ref|YP_001867465.1| endonuclease I [Nostoc punctiforme PCC 73102] gi|186466721|gb|ACC82522.1| Endonuclease I [Nostoc punctiforme PCC 73102] Length = 603 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 39/314 (12%), Positives = 92/314 (29%), Gaps = 47/314 (14%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK------NLDADIVFLQE 73 + + ++N+ L ++ + + + + + +++ D+V E Sbjct: 49 SQDVLTVATFNVENLDPKDRRFDDIAKIIQNNLNAPDIISLVEVQDNNGSINDDVVNANE 108 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV---------- 123 A + F + + +I + R V + Sbjct: 109 TYQKLIAALENIGSPAYDFVDIAPSDDRDGGEPGGNIRVGLLFRPSRVTLAKLPKKGGSL 168 Query: 124 ------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 P + + +R+ + N +K++++ H S Sbjct: 169 DAVAITQGANDLDLSLNPGRIDPTNSAFEESRKPLAAEFIFNDQKLFIIANHFVSKLGG- 227 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 SPS +QA+ + +++ Q + ++ GD N + L KT+ Sbjct: 228 ------SPSDVQRVKQAEIVNEFVGQILEVDPQAKVIVLGDLNDLPDSLP-----LKTLK 276 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 N S K N ID+ ++ +N + + + Sbjct: 277 GNILENLTDSLPASDRFTFKFKGNPQLIDHLLVSENLSRVAQPKIDIVHVNVGFSRP--- 333 Query: 290 KRLSDHCPISIDYD 303 +SDH P+ + Sbjct: 334 --VSDHDPVIAAFT 345 >gi|39996639|ref|NP_952590.1| exonuclease III [Geobacter sulfurreducens PCA] gi|39983520|gb|AAR34913.1| exodeoxyribonuclease III [Geobacter sulfurreducens PCA] gi|298505653|gb|ADI84376.1| exodeoxyribonuclease III [Geobacter sulfurreducens KN400] Length = 271 Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 79/312 (25%), Gaps = 74/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVS+N+N L S L + + DI+ LQE +A Sbjct: 1 MKLVSFNVNGL----------------RSRLHQLEELVRTHRPDIIGLQETKVQDA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + H +A+ + LG A R Sbjct: 41 ------DFPLAAVQALGYHVIYHGQKTHHGVALLSLQPPRDVR----LGLPGDGDEAQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 G + V++ F + + + ++ + Sbjct: 91 FIGATFDLPAGPPLRVIN-----GYFPQGESRDHPVKFPAKERFYADVLAYLKSSCDPDA 145 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 P + GDFN ++ + + + Sbjct: 146 PLAVMGDFNIAPVDPDIGIGADNAKRWLRTGKTSFLPEERAWFAALRDWGLHDSYRELYP 205 Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID+ ++ + + D ++ Sbjct: 206 DIDDRFSWFDYRSRGFESEPKRGLRIDHILLTRPLQQACRAAGI-------DYDIRAMEK 258 Query: 292 LSDHCPISIDYD 303 SDHCP+ ++ D Sbjct: 259 PSDHCPVWVEVD 270 >gi|319427438|gb|ADV55512.1| conserved hypothetical protein [Shewanella putrefaciens 200] Length = 876 Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 46/378 (12%), Positives = 101/378 (26%), Gaps = 88/378 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQ----EGVSLWKNSVKRTTS----DYTLLRQYAKNLDA 66 + + +R+ S+N+ + N T T + ++A Sbjct: 455 APSVATKGDIRVASFNVLNFFNDVVGGDTNPSGSNRGALTEEEMLLQRTKIVSAITAMNA 514 Query: 67 DIVFLQEMGSY-----NAVAKVFP--------KNTWCIFYSTERLINHSKRDSNNDIHTA 113 DIV L E+ + +A+ + N + + K ++ I Sbjct: 515 DIVGLMEIANNGFGEKSALKNLVDALNEKQTADNAYSFIELADADKYDGKYFGSDAITVG 574 Query: 114 IAVRKKNVRVL------------------QQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155 + R V + ++ + + A R ++ +I+ + Sbjct: 575 MLYRAGKVTLEGAARVIETPEQHATAGSVTRTKADKTETNPGNDAYQRHSLAQTFKIHNE 634 Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES--- 201 + V+ HLKS + + A+ L + + K Sbjct: 635 PLTVVVNHLKSKGSGCLEDWVNFEESVDPADLQGKCNAFRVSAAKVLGEALKDVKGDLLV 694 Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTI-------------DPNDSLIRFPK 239 P + DF+ + W T+ + + Sbjct: 695 IGDMNAYGMEDPIRVLTDFDASKSERDIVTASWTTLGGKVYERQGSKIDKGYGLINLNTQ 754 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291 + +D+ + + + K L+ I E ++ GK+ Sbjct: 755 AHGVATYSYSYNGELGNLDHALANTSLAKRLVDIEDWHINSVESNLFEYGKKYSGNLAKS 814 Query: 292 -----LSDHCPISIDYDF 304 SDH P+ I + Sbjct: 815 ENAFSASDHDPVIIALSY 832 >gi|167570556|ref|ZP_02363430.1| exodeoxyribonuclease III [Burkholderia oklahomensis C6786] Length = 258 Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 81/302 (26%), Gaps = 68/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+L+ + + D D++ LQE Sbjct: 1 MRIATWNVNSLN----------------VRKQHVLDWLAQSDVDVLCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ + S P + G Sbjct: 35 LKVPDEKFPRADLEAAGYRSWFTGQKTYNGVAILAR------ASLPFGETNVVRNIPGFE 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + L+ + ++ + + DS + Y Q L+ W+ + + Sbjct: 89 DAQQRLIAATIDGVRIVSAYFPNGQAPDSDKFVYK------MQWLDALQAWLKDEMQRYP 142 Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249 + GD+N +D + P + + D Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLLALGFVDAFRRFDQPEKTFT 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ + D + ++ SDH P+ Sbjct: 203 WWDYRMLAFRRNAGLRIDHILLSPALADTCTSCTV-------DRVPRTWEQPSDHTPVVA 255 Query: 301 DY 302 Sbjct: 256 QI 257 >gi|163749176|ref|ZP_02156426.1| hypothetical protein KT99_20084 [Shewanella benthica KT99] gi|161331246|gb|EDQ02135.1| hypothetical protein KT99_20084 [Shewanella benthica KT99] Length = 365 Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 38/362 (10%), Positives = 93/362 (25%), Gaps = 73/362 (20%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIV 69 ++ ++ ++++ S+N+ + + ++ + +Y D++ Sbjct: 1 MLSTSSDSHYQLKIASFNLFNFIAPPDACYEFDNIYTQEQWQKKLNWIAKYLNEHQPDVI 60 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN---VRVLQQ 126 QE+ S + + + ++S + A+A R V V Sbjct: 61 AFQEVFSPDELETLTKACGLD-YFSVLDSPQVMDDFIYSKPVVALASRYPIKEAVSVSVD 119 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIW---VLDIHLKSFCFLDSLENTYSPSCSL 183 +R+ + V++ + V+ K F S + S Sbjct: 120 KEWAAQMGLVSEFEFSRKPLRATVDLPKLGLCDCYVVHFKSKRTLFDAQDIKANSATSSF 179 Query: 184 LSQ------------QAQWLKDW-----------------ITQKKESLVPFVIAGDFNRK 214 + L W + ++ ++ P ++ GDFN Sbjct: 180 RKSSAGAELNTGQLLAIEALGRWGSSVQRGSEAALLRYAMVERRSQTQNPMILMGDFNDI 239 Query: 215 INYL--------------------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ + F++ D D + Sbjct: 240 LSDGVLAALTSVDTRIKPQADMSQGAMGDIAHQLGFYRLQDSYDLYQASQYSLSEQARPA 299 Query: 249 KNLRN--KIPIDYFVMDQNAYKFLIQESFSEILYNEDDI------KSRGKRLSDHCPISI 300 + +DY ++ Y D + +DH P+ I Sbjct: 300 THYYFAQGSVLDYILLSSEFDAKNDLSLAEVGRYETYDRHLINPSFEHDSQSTDHAPVMI 359 Query: 301 DY 302 Sbjct: 360 TI 361 >gi|153837336|ref|ZP_01990003.1| exodeoxyribonuclease III [Vibrio parahaemolyticus AQ3810] gi|260903451|ref|ZP_05911846.1| exodeoxyribonuclease III [Vibrio parahaemolyticus AQ4037] gi|149749367|gb|EDM60140.1| exodeoxyribonuclease III [Vibrio parahaemolyticus AQ3810] gi|308110362|gb|EFO47902.1| exodeoxyribonuclease III [Vibrio parahaemolyticus AQ4037] Length = 268 Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 81/309 (26%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K + Q G R Sbjct: 42 -------FPIEDVEAMGYKVYFHGQKAHYGVAMLCKQEPIRVQK----GFPTDNEEHQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + NG+K+ VL+ F ++ Q + L ++ + Sbjct: 91 MIMATFENENGEKVTVLN-----GYFPQGDNISHETKFPYKRQFYKDLMTYLNDHHSNDE 145 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ +T+ F K Sbjct: 146 QLIVMGDINISPIDSDIGIGEPNRKRWLKTGKCSFQPEEREWLQTLLNWGFEDTFRKLYP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + + I+ D ++ S Sbjct: 206 EVNDRFSWFDYRSRGFDDNRGLRIDVILATPSLAQKCIESGI-------DYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|305665675|ref|YP_003861962.1| hypothetical protein FB2170_05240 [Maribacter sp. HTCC2170] gi|88710433|gb|EAR02665.1| hypothetical protein FB2170_05240 [Maribacter sp. HTCC2170] Length = 324 Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 36/319 (11%), Positives = 85/319 (26%), Gaps = 51/319 (15%) Query: 25 RLVSWNINTLSEQEGVS-----------LWKNSVKRTTSDYTLLRQYAKNLD-------A 66 + +N+ L + K + KR L + + Sbjct: 16 TIAFYNLENLFDTIDDPETMDDDFTPEGFKKWTPKRYKKKVYKLAKTISEIGLESANRPP 75 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL-Q 125 +V + E+ + V + + I T + + VL Sbjct: 76 ALVGIAEVENEMVVQDLINAEPLRKTAYDYVHYDSPDE---RGIDTGLLYHRDYFEVLFS 132 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-PSCSLL 184 + L+ +R R + + ++NG+ + V H S + + + Sbjct: 133 EPITLMVYNPDGARDTTRDILYVHGKLNGEVVHVFVNHWPSRRDGEEETGYKRVEAAKTI 192 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + +++ + ++I GDFN + ++ ++ K Sbjct: 193 KFKMAQIEE-----QFENPNYIIMGDFNDNPDSKSIQL----LLEDSNLYNPMEKLGSPE 243 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQ-------------------ESFSEILYNEDDI 285 + R+ D ++ N + + F + Sbjct: 244 RGSANYRRSWSLFDQIMVSHNFFNYEKGTHSFAHANIFDDNLLTEWKGKFKGTPFRTYAG 303 Query: 286 KSRGKRLSDHCPISIDYDF 304 + SDH P+ I + Sbjct: 304 RKYIGGYSDHFPVYIQLKY 322 >gi|114564870|ref|YP_752384.1| endonuclease/exonuclease/phosphatase [Shewanella frigidimarina NCIMB 400] gi|114336163|gb|ABI73545.1| Endonuclease/exonuclease/phosphatase [Shewanella frigidimarina NCIMB 400] Length = 870 Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 38/378 (10%), Positives = 95/378 (25%), Gaps = 88/378 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT--------LLRQYAKNLDA 66 T + +R+ S+N+ S + + ++A Sbjct: 454 APTVADMGDIRVASFNVLNFFNDVVGGDANPSGSNRGALIEEEMVLQRTKIVNALVAMNA 513 Query: 67 DIVFLQEMGSYNAVA-------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 D+V L E+ + ++ + + K ++ I Sbjct: 514 DVVGLMEIANNGFGELSAIQNLVDALNAELTDDQAYRFVEIEDADKYEDKFIGSDAITVG 573 Query: 114 IAVRKKNVRVL------------------QQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155 + R + + + + ++ R ++ IN + Sbjct: 574 MLYRPARITLDGAAKVIATPEQHAAEGAQTREKDGVVEQNPSYDKFQRHSLVQTFSINDE 633 Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKE---- 200 K+ ++ HLKS + S A+ L + + + Sbjct: 634 KLTIVVNHLKSKGSGCIEDWADFNENGEPADLQGKCNSFRVSAAKVLGESLKDVEGDVLV 693 Query: 201 --------SLVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPK 239 P + D++ W T++ + + Sbjct: 694 IGDLNAYGKEDPVAVLTDYDASTTDHVIRTASWTTLNGKVYEREGSVIDKGYGLINLNTQ 753 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291 + + +D+ + +++ L+ I E ++ G + Sbjct: 754 AHGADTYSYSYNGELGNLDHALANESLAAKLVGIDDWHINSVESNLFEYGSKYTGELVKT 813 Query: 292 -----LSDHCPISIDYDF 304 SDH P+ I + Sbjct: 814 ESPFSASDHDPVIIALSY 831 >gi|325927724|ref|ZP_08188952.1| putative extracellular nuclease [Xanthomonas perforans 91-118] gi|325541925|gb|EGD13439.1| putative extracellular nuclease [Xanthomonas perforans 91-118] Length = 1193 Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 36/340 (10%), Positives = 90/340 (26%), Gaps = 54/340 (15%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69 P A V + ++N+ + + + +N DI+ Sbjct: 578 PAPVPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNYLHTPDIL 637 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK------- 118 E+ + + + + + + ++ + + + I V+ Sbjct: 638 GTVEVENLSVLQTLAARVNADAVAAGQQDPKYVAYLQEGNDVGGIDVGFLVKTAQIAGGV 697 Query: 119 -KNVRV----LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-----KIWVLDIHLKSFC 168 + + ++ S +R + L ++ + + +H +S Sbjct: 698 ARVEVLSIAQEGKTTTWTEPGGGVSLLNDRPPLVLTANVHQADGRVLPLTAIVVHQRSLN 757 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 ++ + + QA++L + Q+ ++ GDFN G D Sbjct: 758 GAETDDAAGMRIRAKRQAQAEYLARLLQTRQQLNPDEKVLVMGDFNAFEFNDGYVDAMGT 817 Query: 227 T------------------IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 + D + + N +D+ + + + Sbjct: 818 VTGKPAPDAQTVVGGDGTDLVNPDYTDLTWFNTPDQSYSYAFDGNVQSLDHILANDALMR 877 Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300 S S + RLSDH P + Sbjct: 878 APQIASLSVGHARINADFPGTARNDANTPTRLSDHDPTVV 917 >gi|171321352|ref|ZP_02910309.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5] gi|171093370|gb|EDT38560.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5] Length = 286 Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 80/307 (26%), Gaps = 50/307 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 +RL+ WN+ + +GV ++ L ++ D++ LQE+ Sbjct: 1 MRLIDWNVQWGRDADGVVDLAGTIAAGR----RLGEF------DVLCLQEVTRGFGALPG 50 Query: 75 -GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + ++ + A+ + L Sbjct: 51 QPGPDQFTELAALLPGYTIVEAIGADLPALEPGAPRRQFGNAIATRLPVGRVLRQLLPWP 110 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 D+ + R A+++ + + ++ HL+ + + ++A D Sbjct: 111 ADAGGPSMPRVALDVELTTPSGALRIVTTHLEYYSARQ--RLAQVDALRARHREACAHAD 168 Query: 194 WITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + + PF +I GDFN D + + Sbjct: 169 QPAPAENATGPFTATGQPRDAIICGDFNSAFGSEAYRRLLEPIADAPSFVDAWVARHPGN 228 Query: 245 CNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + D+ + + + R SDH Sbjct: 229 TPPPTAGVYDTVQWSEGPLACDFVFVTATLLPRVTRCEI-----------DGDVRASDHQ 277 Query: 297 PISIDYD 303 P+ ++ + Sbjct: 278 PVVLELE 284 >gi|113460979|ref|YP_719046.1| exonuclease III [Haemophilus somnus 129PT] gi|112823022|gb|ABI25111.1| Exodeoxyribonuclease III [Haemophilus somnus 129PT] Length = 267 Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 89/311 (28%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + + D++ LQE + + Sbjct: 1 MKFISFNINGL----------------RARPHQLDRIVEKYQPDVIGLQEIKVSDEDFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + I++ H +A+ K + + +++ R Sbjct: 45 HLVEHLGYHIYHH------------GQKGHYGVALLLKQEPKVIRRGFSTDDENAQKR-- 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +E + + V++ F + + L+ ++ Q+ + Sbjct: 91 ---IIMADLETDFGLLTVIN-----GYFPQGENRQHETKFPAKEKFYADLQHYVEQEHDR 142 Query: 202 LVPFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKE 240 P +I GD N L ++ + + F + Sbjct: 143 NNPILIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWINRLYNYGLIDTFRHK 202 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + ID+ +++Q + + ++ Sbjct: 203 NPTINDQFSWFDYRSKGFDDNRGLRIDHILVNQLLLERCVDAGI-------AFDIRAMEK 255 Query: 292 LSDHCPISIDY 302 SDH PI ++ Sbjct: 256 PSDHAPIWAEF 266 >gi|126463202|ref|YP_001044316.1| endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides ATCC 17029] gi|126104866|gb|ABN77544.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides ATCC 17029] Length = 339 Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 43/338 (12%), Positives = 96/338 (28%), Gaps = 56/338 (16%) Query: 21 AQKVRLVSWNINTLS----EQEGVSLWKNSVKRTT----SDYTLLRQYAKNLDADIVFLQ 72 A+ +R+ ++N+ + + + R + L LDAD + + Sbjct: 2 ARPLRIATYNVEWFNGLFDDHGRLRTDNELSGRYEITRRNQIESLGIVFTALDADAIMVI 61 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E + + + +H+ ++ IA+ R+ P Sbjct: 62 EAPNQSRRRSTVKALE-TFARTFGLRASHAVMGFPSETEQEIALLYDPSRIEAHHDPQSS 120 Query: 133 AKDSFSR----------------AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 AK ++ +EL + +G + V+ +H KS + Sbjct: 121 AKAPRFDDVFRFDIDVDATPEAIRFSKPPLELALRADGHPLRVIGVHAKSKAPHGARNPA 180 Query: 177 Y--SPSCSLLSQQAQ---WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF------- 224 QQ WL+ + ++ GDFN F Sbjct: 181 EAVRIGIQNRRQQLAECVWLRRRVAGLLARHQSVMVMGDFNDGPGLDEYEKLFGRSGIEI 240 Query: 225 ---------WKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFL 270 + +P+ + K +A + +D+ ++ + Sbjct: 241 VLGLEEPPELRLHEPHARMALTQKVGIQPSSARFWLAPEQQYFEALLDFIMVSADLAAKS 300 Query: 271 IQESFSE-----ILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +++ SDH P+++D D Sbjct: 301 PRWRIWHPLNDPNCFRTPELQQALLAASDHFPVTLDID 338 >gi|260779121|ref|ZP_05888013.1| exodeoxyribonuclease III [Vibrio coralliilyticus ATCC BAA-450] gi|260605285|gb|EEX31580.1| exodeoxyribonuclease III [Vibrio coralliilyticus ATCC BAA-450] Length = 268 Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 86/309 (27%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQAVIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K + Q +D R Sbjct: 42 -------FPIEDVEAMGYKVYFHGQKAHYGVAMLCKKEPLSVQKGFPTDNEDHQK----R 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+K+ VL+ F ++ Q + L ++ + Sbjct: 91 MIMATFEDDNGEKVTVLN-----GYFPQGDNISHETKYPYKRQFYKDLMTYLNDHHNNDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ ++ KT+ + F + Sbjct: 146 QLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSFQPEEREWLKTLMDWGFVDTFRQLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + I+ + D ++ S Sbjct: 206 EVEDRFSWFDYRSRGFDDNRGLRIDVVLATPKLAEKCIES-------DIDYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|255014323|ref|ZP_05286449.1| hypothetical protein B2_10460 [Bacteroides sp. 2_1_7] Length = 245 Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 44/308 (14%), Positives = 88/308 (28%), Gaps = 68/308 (22%) Query: 2 IRKYVLAL--VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 +R+ + L + + + + + +R++S+NI +G +D + Sbjct: 1 MRRLAIILVGLILCLGISQAKNKHLRVMSYNIRIGIGMDG-----------ETDLGRIAD 49 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRK 118 + D V LQE+ S + F N + + S + IA Sbjct: 50 AINRITPDYVGLQEVDS--VCERSFWVNQYAELAKHTGMYPIFAPATSRSKGLYGIAALS 107 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K + + L G ++ +L+ + K + + H S Sbjct: 108 KVPPLSYRVISLPGKEEP----------RVLLCLEYKDYILFNTHF-------------S 144 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIR 236 + + + T+ P +I GDFN W+ + Sbjct: 145 LDKESRIESIKVINQIATEY---DKPIIITGDFNMTPGSNEFEAMKSKWQLLSD------ 195 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 R ++ +DY + + SDH Sbjct: 196 ------PSIKTYPADRPRLRLDYIY------------GDMKKNFKVTKDVVVDVMSSDHL 237 Query: 297 PISIDYDF 304 P+ ID +F Sbjct: 238 PLYIDVEF 245 >gi|56460559|ref|YP_155840.1| exonuclease III [Idiomarina loihiensis L2TR] gi|56179569|gb|AAV82291.1| Exonuclease III [Idiomarina loihiensis L2TR] Length = 269 Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 76/309 (24%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN + L+ D++ LQE ++ Sbjct: 1 MKIISFNING----------------IRARLHQLQAVIDKHQPDVIGLQETKVHDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K P G A R Sbjct: 41 ------QFPLKDVEAMGYHVIYHGQKGHYGVAMLSKKPL----ENPQFGFPTDDDEAQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +G + +L+ F + + Q L ++ Sbjct: 91 MIMGDYPLADGGHVRILN-----GYFPQGESRDHPTKFPAKEKFYQDLMSYLDNDLSPEQ 145 Query: 204 PFVIAGDFNRK---------------------INYLGNNDDFWKTIDPNDSLIRFPKEKD 242 P ++ GD N ++L ++ + + + + Sbjct: 146 PVIVMGDVNISRIDLDIGIGENNAKRWLKTGKCSFLPEEREWIQRLMDWGFTDTYRQLNP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 N + ID + + K D ++ S Sbjct: 206 DVDNQFSWFDYRSRGFDDNRGLRIDLILATKALAKQCEDSGI-------DYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 259 DHAPVWSTF 267 >gi|258621396|ref|ZP_05716430.1| exodeoxyribonuclease III [Vibrio mimicus VM573] gi|262171177|ref|ZP_06038855.1| exodeoxyribonuclease III [Vibrio mimicus MB-451] gi|258586784|gb|EEW11499.1| exodeoxyribonuclease III [Vibrio mimicus VM573] gi|261892253|gb|EEY38239.1| exodeoxyribonuclease III [Vibrio mimicus MB-451] Length = 268 Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 82/311 (26%), Gaps = 76/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++S+NIN L + L+ D++ LQE + Sbjct: 1 MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEAFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +++ H +A+ K V + G Sbjct: 45 QEVEAMGYQVYFH------------GQKAHYGVAILCKQTPVEV----IKGFPTDSEEHQ 88 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + +G K +L+ F + Q + L ++ + + + Sbjct: 89 KRMIMATFADEDGNKTTILN-----GYFPQGDNVEHETKFPYKRQFYRDLMTYLREHRSN 143 Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240 V+ GD N ++ ++ +T+ + F + Sbjct: 144 TERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSFQPEEREWLQTLMDWGLVDTFRQL 203 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + + + D + Sbjct: 204 HPEVSDQFSWFDYRSRGFDDNRGLRIDVILATPTLAETCQEAGI-------DYELRGIDK 256 Query: 292 LSDHCPISIDY 302 SDH PI + Sbjct: 257 PSDHAPIWATF 267 >gi|149773191|dbj|BAF64770.1| predicted extracellular nuclease [Shewanella livingstonensis] Length = 870 Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 38/378 (10%), Positives = 94/378 (24%), Gaps = 88/378 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT--------LLRQYAKNLDA 66 T + +R+ S+N+ S + + ++A Sbjct: 454 APTVADMGDIRVASFNVLNFFNDVVGGDANPSGSNRGALIEEEMVLQRTKIVNALVAMNA 513 Query: 67 DIVFLQEMGSYNAVA-------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 D+V L E+ + ++ + + K ++ I Sbjct: 514 DVVGLMEIANNGFGELSAIQNLVDALNAELTDDQAYRFVEIEDADKYEDKFIGSDAITVG 573 Query: 114 IAVRKKNVRVL------------------QQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155 + R + + + + + R ++ IN + Sbjct: 574 MLYRPARITLDGAAKVIATPEQHAAEGAQTRDKDGVVEQSPSYDKFQRHSLVQTFSINDE 633 Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKE---- 200 K+ ++ HLKS + S A+ L + + + Sbjct: 634 KLTIVVNHLKSKGSGCIEDWAEFNENGEPADLQGKCNSFRVSAAKVLGESLKDVEGDVLV 693 Query: 201 --------SLVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPK 239 P + D++ W T++ + + Sbjct: 694 IGDLNAYGKEDPVAVLTDYDASTTDHVIRTASWTTLNGKVYEREGSVIDKGYGLINLNTQ 753 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291 + + +D+ + +++ L+ I E ++ G + Sbjct: 754 AHGADTYSYSYNGELGNLDHALANESLAAKLVGIDDWHINSVESNLFEYGSKYTGELVKT 813 Query: 292 -----LSDHCPISIDYDF 304 SDH P+ I + Sbjct: 814 ESPFSASDHDPVIIALSY 831 >gi|17545188|ref|NP_518590.1| hypothetical protein RSc0469 [Ralstonia solanacearum GMI1000] gi|17427479|emb|CAD13997.1| putative endonuclease/exonuclease/phosphatase protein [Ralstonia solanacearum GMI1000] Length = 248 Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 93/286 (32%), Gaps = 49/286 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA---V 80 +R+ ++NI+ + +RQ +DADIVFLQE+ N Sbjct: 4 LRVATYNIH----------KGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVA 53 Query: 81 AKVFPKNT---WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A++F + + + + + H A+ + +L ++ + S Sbjct: 54 AELFDPHYTQLRYLATDVYPHTVYGRNAVYDHGHHGNAILSRYPILLSENLDI-----SD 108 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R R + + ++ ++ +L H F +QA+ L + + Sbjct: 109 HRFEQRGLLHAVADLGFGEVHLLCAHFGLF-------------ARSRRRQAEALIERVCS 155 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 P V+AGDFN N L + + + + + + + + Sbjct: 156 VVPIDAPLVVAGDFNDWNNRLD--RVICQALGVTEVADKAAGAR--PLRTFPSHLPWLRL 211 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + F + + +R SDH P+ + Sbjct: 212 DRIYVRG----------FEIDRAHALTGRDWAQR-SDHVPLLAELS 246 >gi|254693606|ref|ZP_05155434.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 3 str. Tulya] gi|261213872|ref|ZP_05928153.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 3 str. Tulya] gi|260915479|gb|EEX82340.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 3 str. Tulya] Length = 260 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 87/302 (28%), Gaps = 67/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + L+ + + DIV LQE+ S + Sbjct: 1 MKIATWNING----------------VKARIDNLQHWLRESSPDIVCLQEIKSVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ K D +R Sbjct: 41 ------QFPRLEIEALGYHVETHGQKCFNGVALLSKKSPDEINKGLPGDDSDEQARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + + + V+ ++L + +D+ + Y S Q L++W ++ Sbjct: 92 --IEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQRLENWAKKRLTLEE 143 Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIRFPKEKDSRCNANK 249 P V+AGD+N + + N + Sbjct: 144 PLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRASTDESGVYS 203 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A I + + + ++ SDH P+++ Sbjct: 204 FWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------RAWEKPSDHVPVTV 256 Query: 301 DY 302 Sbjct: 257 TL 258 >gi|218463283|ref|ZP_03503374.1| exodeoxyribonuclease III protein [Rhizobium etli Kim 5] Length = 263 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 95/305 (31%), Gaps = 68/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ + NIN + L Q+ K+ D DIV LQE+ + + + Sbjct: 1 MKIATCNING----------------VKARIDNLTQWLKDSDPDIVCLQEIKT---IDEG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + +A+ K G +R Sbjct: 42 FPRLE-------IEALGYHVETHGQKGFNGVAILSKTSPSEVNR----GLPGDALDEQSR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + N + + V I+L + +++ + Y + + L+ + ++ Sbjct: 91 FLEAVFTLPNTRILRVCCIYLPNGNPVETEKYPYKLA------WMERLRSFAAERLAYEE 144 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+AGD+N +L + ++ ++ N L + Sbjct: 145 MLVLAGDYNVIPEPHDCFDPKVWENDALFLPQTREAFRRLE-NLGLTDAVRATTDATRLY 203 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ A + + + + ++ SDH P+ Sbjct: 204 SFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIEKHV-------RAWEKPSDHVPVI 256 Query: 300 IDYDF 304 +DF Sbjct: 257 AYFDF 261 >gi|271502601|ref|YP_003335627.1| endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech586] gi|270346156|gb|ACZ78921.1| Endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech586] Length = 287 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 38/308 (12%), Positives = 92/308 (29%), Gaps = 55/308 (17%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----------G 75 +VS+NI ++G D + + ADI+ +QE+ Sbjct: 3 IVSYNIQYGLGRDG-----------RYDLARIADEVR--GADIICMQEVERFWQRSGMTD 49 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINH---SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 +A + + W + + + R N + + +++PL Sbjct: 50 QPAELAALLGEYHWVYGANLDMDASTVVADGRVLNRRRQFGTLTLSRRPILSSRNFPLPK 109 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF------LDSLENTYSPSCSLLSQ 186 + + +E +V+ +G I V + HL C +D++ ++ + Sbjct: 110 FGTLTQHSIQQGVLETVVDTDGGAIRVYNTHLSHLCAETRLPQVDAMLGIFARAPEEGGA 169 Query: 187 QAQWLKDWITQKKESLVPF-----VIAGDFNRKINYLGNNDDFW-------KTIDPNDSL 234 D E +P ++ GD N + + + + Sbjct: 170 WCGGHPDPTAGWTEGRMPVMPQEMILMGDLNCLPDSDEYRHLVGPVSPHHGRLVRHRGLM 229 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + + + + ID+ ++ + + + + SD Sbjct: 230 DAWVAAGQLESSGSTHPNVGGRIDHCLLTPSLGVTVRRCWVDTEN-----------QGSD 278 Query: 295 HCPISIDY 302 H P+ ++ Sbjct: 279 HHPLWVEL 286 >gi|268589456|ref|ZP_06123677.1| exodeoxyribonuclease III [Providencia rettgeri DSM 1131] gi|291315121|gb|EFE55574.1| exodeoxyribonuclease III [Providencia rettgeri DSM 1131] Length = 270 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 86/310 (27%), Gaps = 73/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +S+NIN L + L + +++ LQE + Sbjct: 1 MKFISFNINGL----------------RARPHQLAAIIEKHQPEVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP Y + + H +A+ KN + + D+ R Sbjct: 42 FP-------YEEVSQLGYHVFYHGQKAHYGVALLTKNEPLAVRKGFPTDDDDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + ++ + + V++ F + + Q L+++IT + + Sbjct: 90 RIIMADIQTDRGPLTVVN-----GYFPQGESRDHPTKFPAKEKFYQDLQNYITSTQTAES 144 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 +I GD N L ++ + + + + Sbjct: 145 QLLIMGDMNISPTDLDIGIGDANRKRWLKTGKCSFLPEEREWLAKLLGWGLVDTYRAKNP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + I D ++ S Sbjct: 205 DISDCYSWFDYRSKGFDDNRGLRIDLLLASNKLAERCIATGI-------DYEIRGMEKPS 257 Query: 294 DHCPISIDYD 303 DH P+ ++D Sbjct: 258 DHAPVWSEFD 267 >gi|260459779|ref|ZP_05808033.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075] gi|259034581|gb|EEW35838.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075] Length = 264 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 84/302 (27%), Gaps = 66/302 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V+WNIN + L + DIV LQE+ + + Sbjct: 1 MKIVTWNING----------------VRARIGNLTHWLTESAPDIVCLQEIKTVDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ +A+ K D +R Sbjct: 41 ------QFPRAEIEALGYNVETHGQKGFNGVALLSKLRFDEVTKGLPGDDADEQARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + + + V ++L + +D L+ W ++ Sbjct: 92 --IEGVFSTDKGALRVASLYLPNGNPIDDE-----KKFPYKLSWMARLERWAEERLRLEE 144 Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----------NANK 249 V+AGD+N + + + + F + + + Sbjct: 145 ALVLAGDYNVIPEPIDARFPENWLGDALFQPQTRQAFRRLLNLGFTEAVRAVTDAPDTYT 204 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A S + + ++ SDH P++I Sbjct: 205 FWDYQAGAWQKNNGIRIDHLLLSPEAANRFSSASIEKHV-------RAWEKPSDHVPVAI 257 Query: 301 DY 302 D Sbjct: 258 DL 259 >gi|332559251|ref|ZP_08413573.1| endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides WS8N] gi|332276963|gb|EGJ22278.1| endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides WS8N] Length = 339 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 43/338 (12%), Positives = 95/338 (28%), Gaps = 56/338 (16%) Query: 21 AQKVRLVSWNINTLS----EQEGVSLWKNSVKRTT----SDYTLLRQYAKNLDADIVFLQ 72 A+ +R+ ++N+ + + + R + L LDAD + + Sbjct: 2 ARPLRIATYNVEWFNGLFDDHGRLRPDNELSGRYEITRRNQIESLGIVFTALDADAIMVI 61 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E + + + +H+ ++ IA+ R+ P Sbjct: 62 EAPNQSRRRSTVKALE-TFARTFGLRASHAVMGFPSETEQEIALLYDPSRIEAHHDPQSS 120 Query: 133 AKDSFSRAGNRR----------------AVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 A+ R +EL + +G + V+ +H KS + Sbjct: 121 ARAPRFDEVFRFDIDVDATPEAIRFSKPPLELALRADGHPLRVIGVHAKSKAPHGARNPA 180 Query: 177 Y--SPSCSLLSQQAQ---WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF------- 224 QQ WL+ + ++ GDFN F Sbjct: 181 EAVRIGIQNRRQQLAECVWLRRRVAGLLARHQSVMVMGDFNDGPGLDEYEKLFGRSGIEI 240 Query: 225 ---------WKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFL 270 + +P+ + K +A + +D+ ++ + Sbjct: 241 VLGLEEPPELRLHEPHARMALTQKVGIQPSSARFWLAPEQQYFEALLDFIMVSADLAAKS 300 Query: 271 IQESFSE-----ILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +++ SDH P+++D D Sbjct: 301 PRWRIWHPLNDPNCFRTPELQQALLAASDHFPVTLDID 338 >gi|312172585|emb|CBX80841.1| Exonuclease III [Erwinia amylovora ATCC BAA-2158] Length = 301 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 38/313 (12%), Positives = 88/313 (28%), Gaps = 73/313 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++ VS+NIN L + L+ + D++ LQE Sbjct: 31 APAMKFVSFNINGL----------------RARPHQLQAIVEQHQPDVIGLQE---TKVH 71 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +FP + + + H +A+ K V + +D+ Sbjct: 72 DDMFP-------LAEVASLGYHVFYHGQKGHYGVALLCKQQPVAVRRGFASDDEDA---- 120 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + + + + V++ F + + + L ++ Q+++ Sbjct: 121 -QRRIIMADIMTHSGLLTVIN-----GYFPQGESRDHPTKFPAKEKFYRDLHSYLEQQQK 174 Query: 201 SLVPFVIAGDFNRK---------------------INYLGNNDDFWKTIDPNDSLIRFPK 239 +I GD N ++L ++ + + + Sbjct: 175 PDNQLLIMGDMNISSGDLDIGIGEENRKRWLRTGKCSFLPEEREWMDKLMNWGLVDTWRA 234 Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + + + ID + + + D + Sbjct: 235 QHATINDRFSWFDYRSKGFDDNRGLRIDLVLASRPLADRCVATGI-------DYDIRAME 287 Query: 291 RLSDHCPISIDYD 303 + SDH PI ++ Sbjct: 288 KPSDHAPIWAEFS 300 >gi|297583298|ref|YP_003699078.1| 5'-nucleotidase domain-containing protein [Bacillus selenitireducens MLS10] gi|297141755|gb|ADH98512.1| 5'-Nucleotidase domain protein [Bacillus selenitireducens MLS10] Length = 1992 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 36/325 (11%), Positives = 78/325 (24%), Gaps = 60/325 (18%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 K+ + ++N+ S + + D++ L E+ Sbjct: 1281 DKMSVATYNVENFSPESDAEKTARLAYSMAVELNA---------PDVITLVEVMDNYDTR 1331 Query: 82 -----------KVFPKNTWC------IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +V + + +I R V + Sbjct: 1332 VGPDTSASESYQVLIDAIYDEVGVEYAYAEVAPEQGQDGGIPGGNIRNGHLYRVDRVELA 1391 Query: 125 QQSY------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 S L + + +R+ V G+ ++V+ H S Sbjct: 1392 DSSVGTFEDALEVQEDGSLNFGTGLIDPQNDAFRNSRKPVVSEFIFKGEPVFVIGNHWNS 1451 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWI--------TQKKESLVPFVIAGDFNRKINYL 218 + P+ Q + + I + V+ GDFN Sbjct: 1452 KRGDMAPYGMEQPAEQGSRVQRMEIAEVIGDFVGDLNEAHGDDGANVVVVGDFNDYPWSP 1511 Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 + + D + + +D ++ + L +S + Sbjct: 1512 PVTEMA----ERGDLHNAIFELPRNAQYTYNYNGYSQSLDSILVTGSLTAELEVDSMNI- 1566 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303 D R SDH P+ + + Sbjct: 1567 ---NSDFMEVHGRASDHDPMMVQFS 1588 >gi|149202739|ref|ZP_01879711.1| exodeoxyribonuclease III [Roseovarius sp. TM1035] gi|149144021|gb|EDM32055.1| exodeoxyribonuclease III [Roseovarius sp. TM1035] Length = 260 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 78/305 (25%), Gaps = 71/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +++ ++NIN + L + D+ LQE+ Sbjct: 1 MKIATFNING----------------IKARIDALPAWLDEASPDVALLQEIKSVDDGFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++F + + + +A+ K D +R Sbjct: 45 ELFEERGYNV------------ETHGQKGFNGVAILSKRPLEDVTRGLPGDDTDEQARW- 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E V + + + + ++L + + Y + L S Sbjct: 92 ----IEATVVGDHRALRLCGLYLPNGNPAPGPKYDYKLA------WMDRLHARARDLLAS 141 Query: 202 LVPFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P ++ GD+N + ++ I F + + Sbjct: 142 EEPVLMGGDYNIIPQDEDAARPDAWREDALARPESRAAFRRILNLGFTEAFRAQVQGPGH 201 Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ID+F++ A + D + SDH P+ Sbjct: 202 YTFWDYQAGAWNKNDGIRIDHFLLSPQAADLMTDCGI-------DKDIRGRDKPSDHVPL 254 Query: 299 SIDYD 303 ++ + Sbjct: 255 WVELN 259 >gi|56479910|ref|NP_707364.2| exonuclease III [Shigella flexneri 2a str. 301] gi|56383461|gb|AAN43071.2| exonuclease III [Shigella flexneri 2a str. 301] Length = 268 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 84/309 (27%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + +++ R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRRGFPGDDEET-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSLLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + F Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGVVDTFRHANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + ++ D ++ S Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|152993433|ref|YP_001359154.1| hypothetical protein SUN_1850 [Sulfurovum sp. NBC37-1] gi|151425294|dbj|BAF72797.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 514 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 47/336 (13%), Positives = 100/336 (29%), Gaps = 73/336 (21%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKN---------SVKRTTSDYTLLRQYAKNLDADIVFL 71 ++ ++ S+N+ L + + + + +LDADIV L Sbjct: 15 SKPFKVASYNVENLFDANHQGTEYEEYIPGKHNWTKRMAEIKLDHTTEVLCDLDADIVAL 74 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 QE+ + + + + I H K +A+ + + + Sbjct: 75 QEIENESVFNALQKRLKRVGCPYRYSAITHKKGAPIQ-----VALLSRFPLKKHRDLQVS 129 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + R +E+ E++G + + H KS S A+ L Sbjct: 130 FSPY------VRNILEVEAEVDGYPLTIFANHWKSKS--------RKGVESKRIAYARTL 175 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGN-------------NDDFWKTIDPNDS----- 233 + I S ++I GD N + + KTID N Sbjct: 176 EKRILSMPASKE-YIILGDLNSNYDAYLTLPKKLNDTQGKTGINHILKTIDNNKLISKSQ 234 Query: 234 ---------LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK----FLIQESFSEILY 280 + + +++ ++ +D+ ++ + + + SF Sbjct: 235 IRKAPEGMHYSTWNELSYKERWSHRFYGHRSTLDHILLPPSMFDGKGIDYVNNSFRVFKT 294 Query: 281 N-------------EDDIKSRGKRLSDHCPISIDYD 303 + + K G+ SDH P+ +D Sbjct: 295 DRLFTSKGYINRWQIKNGKHTGRGYSDHLPVYAIFD 330 >gi|319891524|ref|YP_004148399.1| Beta-hemolysin [Staphylococcus pseudintermedius HKU10-03] gi|317161220|gb|ADV04763.1| Beta-hemolysin [Staphylococcus pseudintermedius HKU10-03] Length = 311 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 49/300 (16%), Positives = 102/300 (34%), Gaps = 34/300 (11%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++L + N+ LS L+ N + +D +Y + D D+V E + + Sbjct: 21 ELKLATHNVYMLS----GFLYPNWGQSKRADLISKSKYIQ--DNDVVIFNEAFYPASANQ 74 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGAK 134 +F Y T L + + H +A+ K + + + Sbjct: 75 LFNNLKSSYPYQTAVLGRSTSGWDRTEGHYSSTTFENGGVAIVSKYPIRERIQH-IFQHG 133 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 F N+ V +E NGK + V+ H +S + + ++ ++Q + + ++ Sbjct: 134 CGFDNDSNKGFVYTKIEKNGKFVHVIGTHTQS----EDTRCSVGQDRAIRAEQMKEISNF 189 Query: 195 IT-QKKESLVPFVIAGDFNRKINY-LGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNA 247 + + I GD N N G D K ++ +D Sbjct: 190 VKSKNIPKDEVVYIGGDMNVNKNAGNGEFQDMLKNLNVSDVTYTGHSSTWDPQSNSIAKY 249 Query: 248 NKNLRNKIPIDYFVMDQNAYK-------FLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 N +DY +D++ + + ++S + +Y + SDH P+ Sbjct: 250 NYPNSAPEYLDYIFVDKDHRQPGQLINEAVAEKSPTWDVYKFPYLYVYNDY-SDHYPVKA 308 >gi|126661140|ref|ZP_01732219.1| 5'-nucleotidase [Cyanothece sp. CCY0110] gi|126617583|gb|EAZ88373.1| 5'-nucleotidase [Cyanothece sp. CCY0110] Length = 1664 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 45/348 (12%), Positives = 89/348 (25%), Gaps = 70/348 (20%) Query: 21 AQKVRLVSWNINTLS------------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 +++ ++N+ S +S + L LDADI Sbjct: 479 GGTLKVAAFNVLNFFTTLDDGSGLGSGPNNLDSRGADSPEEFDRQIEKLVTTLSTLDADI 538 Query: 69 VFLQEMGS----------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVR 117 + L E+ + A+ + + T ++ D I + Sbjct: 539 IGLTELENEFGGDQNGDGQFAIDTLVNALNDSVGAGTYAYVDPGVNYVGGDAIAVGAIYK 598 Query: 118 KKNVRVLQQSYPLLGAKDSF--------------SRAGNRRAVELLVE--INGKKIWVLD 161 V+V + L D A +R + + E G+ + Sbjct: 599 TDTVQVAPNTTVELLTDDLLPSLNLNLSGEPIFEGDATSRVPLAVTFEEIATGETFTLAV 658 Query: 162 IHLKSFCF--------LDSLENTYSPSCSLLSQQA-QWLKDWITQKK--ESLVPFVIAGD 210 H KS + + + +A Q L W+ ++I GD Sbjct: 659 NHFKSKGSSGLSDTSDPNFDQGDGQGFWNFRRTEASQALDAWLKSDPTGSGDSDYLITGD 718 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 N ++ + + +DY + ++ + Sbjct: 719 LNAYAQEDPI-----TFLENQGYTDLVEQFVGDEAYSFLFDGQYGTLDYALANETLQTQV 773 Query: 271 IQESFSEILYNEDDIKSRG---------------KRLSDHCPISIDYD 303 + I +E D R SDH P+ + D Sbjct: 774 TGATEWRINADEPDALDYNLDFGRNPDLFDGSTPYRTSDHDPVIVGLD 821 >gi|148654035|ref|YP_001281128.1| endonuclease/exonuclease/phosphatase [Psychrobacter sp. PRwf-1] gi|148573119|gb|ABQ95178.1| Endonuclease/exonuclease/phosphatase [Psychrobacter sp. PRwf-1] Length = 251 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 38/290 (13%), Positives = 82/290 (28%), Gaps = 50/290 (17%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + + + ++NI+ S + K+L DI+ LQE+ N + Sbjct: 4 SNSITITTYNIH----------KGMSPLNRQVVTKQIGMALKDLHPDILCLQEVQGQN-L 52 Query: 81 AKVFPKNTW-------CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 ++ N + ++ K + H AV ++ P Sbjct: 53 KRMVKYNEYPNQSQHEWFGEYLNCAHSYGKNCEYENGHHGNAVLSRHPL-----DPKHNV 107 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + ++ R + V G V+ + + +Q + + + Sbjct: 108 NITVNKLEQRGVLHCEVLPLGWPEPVVVLCAHLNLLEND-----------RQKQYRAIAE 156 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 ++ + P ++AGDFN + + F ++ Sbjct: 157 YVNDTIDQSRPLILAGDFNDWKKVS-----CQRLAHELNMTEAFMQKHKKLLPTYPAKLP 211 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +D + L + LSDH PIS + Sbjct: 212 VLSLDRIYVRN-----LKVKRAWVH------KGKPWSELSDHLPISAELS 250 >gi|261567|gb|AAB24455.1| CCR4 [Saccharomyces cerevisiae] Length = 837 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 40/327 (12%), Positives = 84/327 (25%), Gaps = 42/327 (12%) Query: 20 VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + ++S+N + + + L++ + D+D++ LQE+ S Sbjct: 501 AKRTFTVLSYNTLCQHYATPKMYRYTPSWALSWDYRRNKLKEQLLSYDSDLLCLQEVESK 560 Query: 78 NAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 P + ++ R +DS I ++ +++ + Sbjct: 561 TFEEYWVPLLDKHGYTGIFHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDFSG 620 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-----DSLENTYSPSCSLLSQQA 188 + R L +N + + + + + + Q Sbjct: 621 AWMKHKKFQRTEDYLNRAMNKDNVALFLKLQHIPSGDTIWAVTTHLHWDPKFNDVKTFQV 680 Query: 189 QWLKDWITQKKESLV-----------PFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLI 235 L D + + P +I GDFN IN + I + Sbjct: 681 GVLLDHLETLLKEETSHNFRQDIKKFPVLICGDFNSYINSAVYELINTGRVQIHQEGNGR 740 Query: 236 RFPKEKDSRC-----------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277 F + N IDY + Sbjct: 741 DFGYMSEKNFSHNLALKSSYNCIGELPFTNFTPSFTDVIDYIWFSTHALRVRGLLGEVDP 800 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ K SDH P+ ++F Sbjct: 801 EYESKFIGFPNDKFPSDHIPLLARFEF 827 >gi|14861058|dbj|BAB62088.1| deoxyribonuclease I precursor [Rana catesbeiana] Length = 353 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 37/300 (12%), Positives = 85/300 (28%), Gaps = 29/300 (9%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 L+ L C +++ +NI S L Q + + Sbjct: 4 LLLVTLAACFLHAGSALKIAGFNIERFSAT---------KVDDPVVLNRLIQILRRYE-- 52 Query: 68 IVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 ++ +QE+ + + A+ K+ + S LI+ S R+ ++ + Sbjct: 53 LIAVQEVMNKDDTAIIKLVRELNKATGLSYNLLISDHLGRSAYREKYVYVYREDILKPTE 112 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 + G ++ + R ++ + + +L Sbjct: 113 WFHYDDGCENCGTDVFMREPFVARFSSLTTEVKDFALAVVHTSPD----YAVREVDALFD 168 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + + I GD+N +Y+ + + SL + Sbjct: 169 VWEDAKQRLLM------EDIFILGDYNAGCSYVKSAHWPTIRLRQEASLQWLIGDNADTT 222 Query: 246 NANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGK--RLSDHCPISIDY 302 + P D V+ + ++ S Y E + + SDH P+ ++ Sbjct: 223 VSTNTN---CPYDRIVVGGSRLQDSVVPGSAKAFNYQEAYGLTYEETKAASDHYPVEVEL 279 >gi|260220884|emb|CBA28896.1| hypothetical protein Csp_A09430 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 257 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 81/303 (26%), Gaps = 72/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WNIN+L + + D++ LQE+ Sbjct: 1 MKLATWNINSLG----------------VRLPQVLDWLAANPVDVLALQEL---KLTDDK 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + + + +A+ + + F +R Sbjct: 42 FPADAFEAI-------GYHAQWFGQKTYNGVALLSRTPASDV-----IKNIPGFDDDMSR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V+ + + S + Y + L+ W+ + + Sbjct: 90 VITGTV-----DGVRVIGAYFPNGQEPGSDKFEYK------MEWLSALRRWVKDELATHP 138 Query: 204 PFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRFPKEKDSRCNAN----------K 249 V+ GD+N + D + C++ Sbjct: 139 NLVLMGDYNITFDEDDVWDPVNLEGTIHCTEEERYHLRALIALGLCDSYRLFPYPPKSFS 198 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ + + D + +R SDH P+ + Sbjct: 199 WWDYRDAGFRRNRGLRIDHILVSNALKPQVTACTI-------DKTPRKNERPSDHAPVVV 251 Query: 301 DYD 303 D Sbjct: 252 DIS 254 >gi|22299328|ref|NP_682575.1| exodeoxyribonuclease III [Thermosynechococcus elongatus BP-1] gi|22295511|dbj|BAC09337.1| exodeoxyribonuclease III [Thermosynechococcus elongatus BP-1] Length = 280 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 32/303 (10%), Positives = 78/303 (25%), Gaps = 68/303 (22%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 ++ +WN+N + + Q+ + D + LQE +A Sbjct: 22 KIATWNVN----------------SIRTRLDHVCQWLDSTGVDYLCLQETKVTDA----- 60 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + S + +A+ + ++ +R Sbjct: 61 -----EFPRQPFLDRGYHVYCSGQKAYNGVAILSRQPLAGVEAGFAPQLPSHSELDTQKR 115 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + + + ++++++ + DS + Y + L ++ Q Sbjct: 116 LIRAQFAPD---VILVNVYIPNGGEYDSEKYHYK------LHWLKTLYVYLEQLTTQGE- 165 Query: 205 FVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GDFN D I F + ++ + Sbjct: 166 VILCGDFNIAPEDKDLFDASDRATKVGATDAERNLLAAIRDLGFHDAFRQFTEAPGH-YS 224 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ + D R + SDH P+ + Sbjct: 225 WWDYRSGAFRRNHGWRIDHLYVTPGVKARACNCHI-------DIAPRRLPKPSDHAPVIL 277 Query: 301 DYD 303 + + Sbjct: 278 EIE 280 >gi|256113921|ref|ZP_05454714.1| Endonuclease/exonuclease/phosphatase family protein [Brucella melitensis bv. 3 str. Ether] gi|265995273|ref|ZP_06107830.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 3 str. Ether] gi|262766386|gb|EEZ12175.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 3 str. Ether] Length = 369 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 44/366 (12%), Positives = 98/366 (26%), Gaps = 86/366 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKN----------------SVKRTTSDYTLLRQY------- 60 + ++N+ L + S ++N + R + Sbjct: 2 FTIATFNVENLMRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMT 61 Query: 61 ---AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 ADI+ LQE+ + A+ + + R + + I A+ +R Sbjct: 62 ALAIAETRADILCLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121 Query: 118 ------KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKI 157 + S+ L D R R + + + I G+ + Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 181 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNR 213 + HLKS + ++ + S + +A+ ++ I +K + ++I GDFN Sbjct: 182 SLFVAHLKSMSGAHNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 241 Query: 214 KINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP 256 + + ++ + Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301 Query: 257 ----IDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 +DY + + + + + SDHCP Sbjct: 302 HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHCP 361 Query: 298 ISIDYD 303 +S+ + Sbjct: 362 VSVTLN 367 >gi|194290013|ref|YP_002005920.1| hypothetical protein RALTA_A1916 [Cupriavidus taiwanensis LMG 19424] gi|193223848|emb|CAQ69857.1| conserved hypothetical protein; Endonuclease/Exonuclease/phosphatase family [Cupriavidus taiwanensis LMG 19424] Length = 284 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 84/305 (27%), Gaps = 51/305 (16%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEMGSYNAVAKVF 84 L+SWNI +G D + + DAD++ LQE+ + Sbjct: 3 LISWNIQWGRGADG-----------RVDLARQVDTLRAMADADVICLQEVTRGFTELRGE 51 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIH--------TAIAVRKKNVRVLQQSYPLLGAKDS 136 P + H S D V + + L D Sbjct: 52 PGIDQVAELTALLPGYHVLFASGVDRRDRNGAHKQFGNLVATRLPVREVFRHALPWPADP 111 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + R A+E+ VE +++ V+ HL+ + L + + QA Sbjct: 112 HVASMPRVALEVTVEAGPRRLRVICTHLEYYSALQ--RAAQAEALRDWHVQACDHASRPG 169 Query: 197 QKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + ++ PF ++ GDFN K + + D Sbjct: 170 RSEKWPGPFTPEPRPAEAILCGDFNSKPDDIAYRRMLEPFDDTTTPWRDAWLHAHPGLPH 229 Query: 248 NK---------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 D+ + +N + + + + SDH PI Sbjct: 230 APTCAIHDKEQWPEPPFACDFMFVTENLAARIRRCEVNADTAD-----------SDHQPI 278 Query: 299 SIDYD 303 + D Sbjct: 279 LLSLD 283 >gi|42528087|ref|NP_973185.1| endonuclease/exonuclease/phosphatase family protein [Treponema denticola ATCC 35405] gi|41819132|gb|AAS13104.1| endonuclease/exonuclease/phosphatase family protein [Treponema denticola ATCC 35405] Length = 339 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 102/342 (29%), Gaps = 59/342 (17%) Query: 4 KYVLALVFFLVPCTASVA---------QKVRLVSWNINTLSE--QEGVSLWKNSVKRTTS 52 + F L CT ++ +VS+N T + ++G + +T Sbjct: 11 SIFICFCFILCACTGCTNVFRLQNIGKDEISIVSYNAQTFFDAVEDGREFKEFKGSKTKW 70 Query: 53 DYTLLRQYAKNLD-----------------ADIVFLQEMGSYNAVAKVFPKNTWCIFYST 95 + L DI+ LQE+ S + Y Sbjct: 71 SKEKYAERLFRLKEAVNLSCLALGLGEKAIPDILVLQEIESRAVIDDFCKILPMNNSYKY 130 Query: 96 ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-- 153 I + + A+ K + + + K S R +E + I Sbjct: 131 AVFIPPQNGGAFS-----TALLSKFPITETKVFNVYSGKRS-----LRPLIETRIRIGNS 180 Query: 154 --GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211 ++ +L++H KS ++ ++ + LK E PF+I GDF Sbjct: 181 TGDNELVLLNVHWKSKVGNSDTDSIRRQQEEQAYKRLKELKA-----SEPQTPFIICGDF 235 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK--- 268 N+ + +F + ++ +E + + ID+F N Sbjct: 236 NQTLEEFSLLSEFDNCWN-IEAYRAAAQEGSQPAGSYFYKESWEGIDHFFYSDNLSDGKN 294 Query: 269 -------FLIQESFSEILYNEDDIKSR-GKRLSDHCPISIDY 302 + + ++ D GK SDH PI I Sbjct: 295 FDLSFFCVINLKPLTDTSGKPDKYSVYSGKGYSDHLPIGIIL 336 >gi|116668987|ref|YP_829920.1| exodeoxyribonuclease III [Arthrobacter sp. FB24] gi|116609096|gb|ABK01820.1| Exodeoxyribonuclease III [Arthrobacter sp. FB24] Length = 294 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 33/302 (10%), Positives = 76/302 (25%), Gaps = 55/302 (18%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 V++ +WN+N+L + + + + D D++ +QE + Sbjct: 25 GTVKIATWNVNSL----------------RARADRVEAWLERSDCDVLAIQETKCKDD-- 66 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ----SYPLLGAKDSF 137 + + + +A+ + + P+ G Sbjct: 67 --------NFPWELFERMGYEVAHFGVSQWNGVAIVSRVGLEDVERSFVDQPVFGKNGKD 118 Query: 138 SRAGNRRA--------VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + R V L NG+ + + K + + Q Sbjct: 119 AIQEARAIGATCGGVRVWSLYVPNGRALDDEHMPYKLSWLDMLKTHAQAWVTENPEAQIA 178 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + DW ++ V + N + ++ + Sbjct: 179 LMGDWNIAPQDDDVWDIDFFRANAMTHVSEPERAAFRAFEDAGFQDVVRPHTPGP-GVYT 237 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ID+ + + S D + +GK SDH P+ + Sbjct: 238 YWDYTQLRFPKKEGMRIDFVLASPALAARVTGASI-------DREERKGKGASDHAPVIV 290 Query: 301 DY 302 + Sbjct: 291 EL 292 >gi|238561644|ref|ZP_00441777.2| exodeoxyribonuclease III [Burkholderia mallei GB8 horse 4] gi|254200314|ref|ZP_04906680.1| exodeoxyribonuclease III [Burkholderia mallei FMH] gi|254209389|ref|ZP_04915735.1| exodeoxyribonuclease III [Burkholderia mallei JHU] gi|147749910|gb|EDK56984.1| exodeoxyribonuclease III [Burkholderia mallei FMH] gi|147750162|gb|EDK57233.1| exodeoxyribonuclease III [Burkholderia mallei JHU] gi|238524267|gb|EEP87701.1| exodeoxyribonuclease III [Burkholderia mallei GB8 horse 4] Length = 269 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 82/303 (27%), Gaps = 68/303 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+ +WN+N+L+ + + D D++ LQE Sbjct: 11 PMRIATWNVNSLN----------------VRKQHVLDWLAQSDVDVLCLQE--------- 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + +A+ + S P + G Sbjct: 46 -LKIPDEKFPREALEAAGYRSWFAGQKTYNGVAILAR------ASLPFDETDIVRNIPGF 98 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 A + L+ + ++ + + LDS + Y Q L+ W+ + + Sbjct: 99 EDAQQRLIAATIDGVRIVSAYFPNGQALDSDKFVYK------MQWLDALQAWLKDELQRY 152 Query: 203 VPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNAN 248 + GD+N +D + P + + + Sbjct: 153 PKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLVALGFVDAFRRFEQPEKTF 212 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ++ ID+ ++ + + D + ++ SDH P+ Sbjct: 213 TWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTV-------DRVPRTWEQPSDHTPVV 265 Query: 300 IDY 302 Sbjct: 266 AQL 268 >gi|34496332|ref|NP_900547.1| exodeoxyribonuclease III [Chromobacterium violaceum ATCC 12472] gi|34102184|gb|AAQ58551.1| exodeoxyribonuclease III [Chromobacterium violaceum ATCC 12472] Length = 257 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 77/304 (25%), Gaps = 74/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R +WN+N+L + Q+ +++ LQE Sbjct: 1 MRFATWNVNSL----------------KVRLPQVLQWLAETGVEVLCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ + + A R Sbjct: 35 LKMDQGAFPLAEIEAAGYRAVWFGQKTYNGVAILARTPL----EMTDVVAGIPGYGDEQR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V+ + + +DS + Y + L+ ++ + Sbjct: 91 RVIAATVN----GVRVICGYFVNGEAVDSPKYPYK------LEWLSKLEGYVAAELARHP 140 Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD+N D F + I L + + Sbjct: 141 QLLLLGDYNIAPEDRDVYDPEGWREQVLCSTPERDAFRRLIALG--LSDSFRLFNQEEKQ 198 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ D + +R SDH P+ Sbjct: 199 YSWWDYRQMMFRRNKGVRIDHILVSDALKPRAQACEI-------DKAPRKWERPSDHTPV 251 Query: 299 SIDY 302 + Sbjct: 252 VLTL 255 >gi|329911665|ref|ZP_08275588.1| Exodeoxyribonuclease III [Oxalobacteraceae bacterium IMCC9480] gi|327545815|gb|EGF30936.1| Exodeoxyribonuclease III [Oxalobacteraceae bacterium IMCC9480] Length = 256 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 33/302 (10%), Positives = 83/302 (27%), Gaps = 72/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N+L + Q+ + D++ LQE + + Sbjct: 1 MKLATWNVNSL----------------KVRLPQVLQWLADNPIDVLCLQETKTIDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + S + +A+ K + + Sbjct: 41 ------KFPQAEIEAAGYHVAFSGQKTYNGVAILSKQPMTDVVRN------NPHFADEQQ 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + ++ + V+ ++ + DS + Y + L+ W+ + + Sbjct: 89 RLIAATID----GVRVICAYIPNGQAPDSDKYQYK------LRWLDGLQQWLALEMAAHP 138 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPNDS-----------LIRFPKEKDSRCNANK 249 F + GD+N +D + + L + + Sbjct: 139 KFALLGDYNIAPEDRDVHDPAAWVGQILVSEPERAAFQRMIALELTDAFRLFEQADKLFS 198 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ + D + + ++ SDH P+ Sbjct: 199 WWDYRQMGFRRNAGMRIDHILLSKELAAACTSCVI-------DKVPRKWEQPSDHTPVVA 251 Query: 301 DY 302 Sbjct: 252 TI 253 >gi|291515850|emb|CBK65060.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301] Length = 313 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 40/291 (13%), Positives = 71/291 (24%), Gaps = 34/291 (11%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNA 79 + +R+ S+NI + R + ++ + + D DI QE Sbjct: 47 EPIRVASYNIQYDNRN-------EEAGRWENRKEIVCRLLEAEDFDIFGAQEPYKFQIED 99 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 +A P TW T + + T ++ P + Sbjct: 100 MAAALPGYTWIGTSVTGEDNVERRHFNPIFYKTDKFEVLESGSFWYSETPNVPNTKFSDS 159 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + + F + S LL ++ + Sbjct: 160 YSPRMCNWAHFRVKATGKEFFHFNSH---FDHIGTVARAESAKLLIEKVAEIA------- 209 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDF--WKTIDPNDSLIRFPKEKDSRCNANKN----LRN 253 P GDFN N +D N K Sbjct: 210 -GKTPAFCTGDFNSNQQTNVYNTIVTSGTLVDSYARTTDKVNADWPSYNGYKYISTPPAK 268 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ + + + + K SDH P+ I++ F Sbjct: 269 ASRIDHIFVTKGRT--------KVQSWAIVNTSYSQKYPSDHFPVVIEWSF 311 >gi|150003207|ref|YP_001297951.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus ATCC 8482] gi|254882487|ref|ZP_05255197.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|294776025|ref|ZP_06741521.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus PC510] gi|319640411|ref|ZP_07995133.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_40A] gi|149931631|gb|ABR38329.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus ATCC 8482] gi|254835280|gb|EET15589.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|294450163|gb|EFG18667.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus PC510] gi|317387898|gb|EFV68755.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_40A] Length = 281 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 37/296 (12%), Positives = 70/296 (23%), Gaps = 38/296 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 C VR ++NI + Q+ ++ W + Q+ K+ + DIV +QE+ Sbjct: 17 CAEEKKTDVRWATFNIRYDNPQDSLNNW-------QYRKDRVCQFIKDHELDIVGMQEVL 69 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + + P Sbjct: 70 HNQFQDLRAGLPEYDGIGVGRDDGKTAGEYAPLFYRKDKYEVLDSNTFWLAENPDSVGMM 129 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + R A + + ++ F E S L+ ++ + + Sbjct: 130 GWDAVCVRIATWAKFKDKATGKIFMAVNTH---FDHVGEEARRQSALLIIRKIKEIV--- 183 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-- 253 P V+ GDFN D+ + Sbjct: 184 -----GERPAVVTGDFNVTDASDAYETITTNEFVMKDAYKTAARVTGVD---YTFHDFAR 235 Query: 254 -----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ + + LSDH P D +F Sbjct: 236 IPAEDCEKIDFIFVTPQVLVKSCEIPAEV----------PEALLSDHNPQLADLEF 281 >gi|289671150|ref|ZP_06492225.1| putative secreted protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 801 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 40/340 (11%), Positives = 93/340 (27%), Gaps = 54/340 (15%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69 P A V + ++N+ + + + +N DI+ Sbjct: 184 PAPMPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNYLHMPDIL 243 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK-----KN 120 E+ + + + + + S ++ + + + I V+ Sbjct: 244 GTVEVENLSVLQTLAARVNADAVSSGQQDPKYVAYLQEGNDVGGIDVGFLVKTADTAGGV 303 Query: 121 VRVLQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGK-----KIWVLDIHLKSFC 168 RV S G +++ R + L ++ + + +H +S Sbjct: 304 PRVDVLSIAQEGKTTTWTEPAGGVSLLNDRPPLVLTANVHQVDGRTLPLTAIVVHQRSLN 363 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFW- 225 ++ + + + QA++L + Q+ ++ GDFN G D Sbjct: 364 GAETDDAAGTRIRAKRQAQAEYLARLLQTRQQLNPDEKVLVMGDFNAFEFNDGYVDAMGT 423 Query: 226 -----------------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 + D + + N +D+ + ++ + Sbjct: 424 VTGKPAPDAQTVVGGDGADLVNPDYTDLTWFNTPDQSYSYAFDGNVQSLDHILANEALMR 483 Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300 S S + RLSDH P + Sbjct: 484 LPQIASLSVGHSRINADFPGTARNDANTPTRLSDHDPTVV 523 >gi|257093975|ref|YP_003167616.1| Endonuclease/exonuclease/phosphatase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046499|gb|ACV35687.1| Endonuclease/exonuclease/phosphatase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 294 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 89/311 (28%), Gaps = 74/311 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+R+ ++NI+ + R +R + +DADIVFLQE+ N + Sbjct: 2 KLRVATYNIH----------KGVTGIRGRPRIHDVRLALEAIDADIVFLQEVQDRN--ER 49 Query: 83 VFPKNTWCIFYS-------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + H A+ ++ ++ + Sbjct: 50 LAHHPGYPFGTQLDFLASGAYAHRAYGMNAVYPHGHHGNAILSRHRITESANHDI----- 104 Query: 136 SFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 S R + + + G+++ ++ +HL +QA +L Sbjct: 105 SDHALEKRGLLHAVTRLGRGRGREVHLICVHLGLIK-------------RSRVRQATFLA 151 Query: 193 DWITQKKESLVPFVIAGDFNRK--------------------INYLGNNDDFWKTIDPND 232 D++ ++ + P +IAGDFN + Sbjct: 152 DFVQREVPASAPLIIAGDFNDWQQRVDGLLRDRLGVQEVAVAATSPPPEGGLLDRLLSWR 211 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + + +D + F + + R Sbjct: 212 PASDA---QSGVSRTFPSFAPWLTLDRIYVRG----------FRVLDMQVPQGLA-WARC 257 Query: 293 SDHCPISIDYD 303 SDH P+ + + Sbjct: 258 SDHAPLIAELE 268 >gi|256784140|ref|ZP_05522571.1| exonuclease [Streptomyces lividans TK24] gi|289768021|ref|ZP_06527399.1| exodeoxyribonuclease III [Streptomyces lividans TK24] gi|289698220|gb|EFD65649.1| exodeoxyribonuclease III [Streptomyces lividans TK24] Length = 259 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 79/304 (25%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N T+ L + ++ D++ LQE A Sbjct: 1 MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCLQEAKVAEA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + R + +AV + L G R Sbjct: 41 ------QFPFDALREAGYEAAVHATGRWNGVAVLSRVGLEDVVKG-LPGDPGYEGVQEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + +D Y Q + L+ + Sbjct: 94 A-----ISATCGPVRVWSVYVPNGREVDHPHYAYK------LQWFEVLRAAVEGDAAGGR 142 Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF + GD+N D ++ P+ + Sbjct: 143 PFAVLGDYNVAPTDDDVYDRAAFEGATHVTPAERAALASLRGAGLSDVVPRPLKYD-HPF 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID ++ K + D + +GK SDH P+ Sbjct: 202 TYWDYRQLCFPKNRGMRIDLVYGNEPFAKAVTDSYV-------DREERKGKGASDHAPVV 254 Query: 300 IDYD 303 +D D Sbjct: 255 VDLD 258 >gi|299145010|ref|ZP_07038078.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] gi|298515501|gb|EFI39382.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] Length = 264 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 84/311 (27%), Gaps = 59/311 (18%) Query: 1 MIRKYVLALVFFLVPCTASVAQ---------KVRLVSWNINTLSEQEGVSLWKNSVKRTT 51 M + ++L S AQ V+ +++N + +Q Sbjct: 1 MNFRICISLFLLCCLLQPSTAQQPVTKPKEVTVKAMTYNTYSGRKQG------------- 47 Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 + + K + DIV LQE+ + + D Sbjct: 48 --IDKIAEVIKKENPDIVSLQEIERNTEINPWDTPKKLSELTGMKYYYFAHALDIPTGGD 105 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 + K ++S+ L K+ R + V GK+ + HL Sbjct: 106 YGNVILSKYPVSEEKSFKLSVLKEGDY---VRSFGYVKVAKEGKEFYFATTHLDHKYEDA 162 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 + + + + + ++ P ++ GD N + F K N Sbjct: 163 AR--------------LKQIDEILACVEQLDKPVILGGDLNSRRGSATM-AAFQKYFTVN 207 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 P D+ + N E+F+ Y+ + Sbjct: 208 CLSDGAP-------WTVPVPSPAYACDWLIYTPN-------EAFTVKAYDVCYWADKE-- 251 Query: 292 LSDHCPISIDY 302 SDH P+ Y Sbjct: 252 -SDHYPVVATY 261 >gi|183599926|ref|ZP_02961419.1| hypothetical protein PROSTU_03446 [Providencia stuartii ATCC 25827] gi|188022200|gb|EDU60240.1| hypothetical protein PROSTU_03446 [Providencia stuartii ATCC 25827] Length = 301 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 89/312 (28%), Gaps = 42/312 (13%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 K++++++N L + + + + + D DIV LQE+ + ++ Sbjct: 2 PHKIKVMTFNTYLL----HIPFFSIGASTQDARINAMIKDNIFYDVDIVILQEVFNTHSA 57 Query: 81 AKVFPKNTWCIFYST-------------------ERLINHSKRDSNNDIHTAIAVRKKNV 121 K+F F+ + D +++ IA+ + Sbjct: 58 QKLFSGMRSLGFFYHTPVAAQYNESVLSYCDSNHCWNAKKGEWDMVQQVNSGIAIVSRYP 117 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 V ++ A R + V ++EI GK + V+ HL+S D + Sbjct: 118 IVYREYQLFDDAGCGADRFSAKGGVRAVIEIEGKMLQVIGTHLQS----DDNFCLMTSPS 173 Query: 182 SLLSQQAQWLKDWITQKKESLVPF-VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 S Q L +W ++ GD N I + P+ Sbjct: 174 SHRKAQLTQLINWAETSITEDRQITILGGDLNINYGSEEYEQAL-DIIGWGEPHHFNPRP 232 Query: 241 KDSRCNA------NKNLRNKIPIDYFVMDQNAYKFLIQESFSE---ILYNEDDIKSRGKR 291 + R +DY YN Sbjct: 233 SWDFSTNNVIREAYPDTRQSWHLDYIFAKNMRSIKQQTRVIKSKIGYNYNNKVFFDY--- 289 Query: 292 LSDHCPISIDYD 303 SDH P+ + + Sbjct: 290 -SDHYPVVAEIE 300 >gi|254785075|ref|YP_003072503.1| extracellular nuclease [Teredinibacter turnerae T7901] gi|237685604|gb|ACR12868.1| extracellular nuclease [Teredinibacter turnerae T7901] Length = 796 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 46/353 (13%), Positives = 92/353 (26%), Gaps = 74/353 (20%) Query: 15 PCTASVAQKVRLVSWNINTLSEQ----------EGVSLWKNSVKRTTSDYTLLRQYAKNL 64 +V+ +++ S+N+ + +S L Q L Sbjct: 352 AFAPAVSGNLKVASFNVLNFFKTLAAAGVSTAAGHAPRGADSAAEFARQKNKLVQGLVGL 411 Query: 65 DADIVFLQEMGSY--------NAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIA 115 +AD+V L E+ + A+ + + + T + R +D I Sbjct: 412 NADVVGLIELENDFDQTNDNSTALELLVSELNSFLGGHTYDYVYPGTRFVGSDAIAVGFI 471 Query: 116 VRKKNVRVLQQSYP------------------LLGAKDSFSRAGNRRAVELLV--EINGK 155 + V V + P + A NR ++ + +G+ Sbjct: 472 FKPAVVSVAAGTKPALLNDTVAASLEGFSGHDFVANPVFDGVASNRVSLAVSFAHLASGQ 531 Query: 156 KIWVLDIHLKSF---------CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SLVP 204 + + H KS + Q A+ + W+ + Sbjct: 532 VLTIAANHFKSKGRSGLTDLHSPDYDKSDGAGFWNQRRLQAARAVAAWLDTAPTGVAGQE 591 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 +I GD N + D + + +DY ++ Sbjct: 592 RIILGDLNSYAMEDPIQYLLSQGYHNADPV---------GAYSYVFDGQVGTLDYMLVSD 642 Query: 265 NAYKFLIQESFSEILYNEDDIKSRG---------------KRLSDHCPISIDY 302 L + I +E D R SDH P+ + + Sbjct: 643 ALSSTLEESLIWNINADEADALDYNLDFGRSPTYFNAASPLRSSDHDPVLVGF 695 >gi|126730184|ref|ZP_01745996.1| Endonuclease/exonuclease/phosphatase [Sagittula stellata E-37] gi|126709564|gb|EBA08618.1| Endonuclease/exonuclease/phosphatase [Sagittula stellata E-37] Length = 239 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 48/283 (16%), Positives = 81/283 (28%), Gaps = 61/283 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAVA 81 +R+ S+NI K D + +DAD++ LQE A Sbjct: 12 SMRVASYNIR-----------KAVGLDWRRDPHRVVDVLGEIDADVIALQEADRRIGTRA 60 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 V P + + S+ AI VR + + + L Sbjct: 61 GVLPLDRLETELGYIMTDVSIRPLSHGWQGNAILVRSRLFDHVAERILLPTM-------E 113 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R AV + + ++ + + L +Q L+ + ++ Sbjct: 114 PRGAVSVRLRQPDLEVIGVHLGLTPGM---------------RRKQMLTLQKRL---EDC 155 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 P ++AGDFN + + P S R +D FV Sbjct: 156 DHPVLLAGDFNEWNSGRLPFAAPATVVSPGLSFHAS--------------RPTASLDRFV 201 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + S + KR SDH P+ +D F Sbjct: 202 LGPGLR----SVSAHVHH------SALAKRASDHLPVVVDIAF 234 >gi|116050489|ref|YP_790692.1| exonuclease III [Pseudomonas aeruginosa UCBPP-PA14] gi|296389031|ref|ZP_06878506.1| exonuclease III [Pseudomonas aeruginosa PAb1] gi|313107448|ref|ZP_07793636.1| exodeoxyribonuclease III [Pseudomonas aeruginosa 39016] gi|115585710|gb|ABJ11725.1| exodeoxyribonuclease III [Pseudomonas aeruginosa UCBPP-PA14] gi|310880138|gb|EFQ38732.1| exodeoxyribonuclease III [Pseudomonas aeruginosa 39016] Length = 270 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 38/312 (12%), Positives = 80/312 (25%), Gaps = 76/312 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L + D++ LQE Sbjct: 1 MKIVSFNINGL----------------RARPHQLAALIERHQPDVIGLQE---TKVADDQ 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + + H +A+ + + ++S R Sbjct: 42 FPQ-------AEIEALGYHVHYHGQKGHYGVALLSRQAPLELHRGFPSDGEES-----QR 89 Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + G I V++ F + + L+ + + Sbjct: 90 RFIWGTFSDAQGNPITVMN-----GYFPQGENREHPTKFPAKQRFYADLQSLLENSFKPE 144 Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241 V+ GD N ++L ++ T+ + F Sbjct: 145 QALVVMGDINISPEDCDIGIGEENRKRWLKTGKCSFLPEEREWLATLKNWGLVDSFRALN 204 Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + + D + Sbjct: 205 PEVNDRFSWFDYRSRGFEDTPKRGLRIDVILASRVLQSRFKDAGI-------DYDLRGME 257 Query: 291 RLSDHCPISIDY 302 + SDH PI ++ Sbjct: 258 KPSDHAPIWLEL 269 >gi|242372571|ref|ZP_04818145.1| Sphingomyelin phosphodiesterase [Staphylococcus epidermidis M23864:W1] gi|242349788|gb|EES41389.1| Sphingomyelin phosphodiesterase [Staphylococcus epidermidis M23864:W1] Length = 329 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 39/302 (12%), Positives = 90/302 (29%), Gaps = 33/302 (10%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +++ + N+ L +++ N + +D Y + D+V E+ A Sbjct: 36 SEDSLKITTHNVYFLPT----AIYPNWGQSQRADLISKADYIQGQ--DVVIFNELFDKKA 89 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLL 131 ++ Y T + + + + K V Q+ + Sbjct: 90 SHRLLTNLQSQYPYQTPIVGKGIEGWQKTSGSYRKVKQVSGGVGIVSKWPIVQQEQHIYK 149 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + + N+ + + NGK ++ HL++ + S+ Q + Sbjct: 150 DGCGA-DKLSNKGFAYIKINKNGKYHHIIGTHLQA----EDPTCMKGKDQSIRQSQMNEI 204 Query: 192 KDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 K +I + P I GD N I ++ + +N Sbjct: 205 KQFIKDKHIPKNEPVYIGGDLNV-IKGSDEYQQMPDNLNVSLPTQFEGNPYSWDTQSNSI 263 Query: 251 LRN------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPI 298 + +DY ++D++ + ++ + + SDH P+ Sbjct: 264 AKYNYPKLEPQHLDYILLDRDHAQPSSWHNYVHKTKAPEWSVKSWGKTYKYNDYSDHYPL 323 Query: 299 SI 300 S Sbjct: 324 SA 325 >gi|86130803|ref|ZP_01049402.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia donghaensis MED134] gi|85818214|gb|EAQ39374.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia donghaensis MED134] Length = 350 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 43/353 (12%), Positives = 85/353 (24%), Gaps = 64/353 (18%) Query: 2 IRKYVLALVFFLVPCTASVAQK------VRLVSWNINTLSEQ-------EGVSLWKNSVK 48 ++ VLAL L + AQ+ + +N+ L + + Sbjct: 1 MKLKVLALSGLLTVTAFAKAQQDKTYRAHTIAFYNVENLFDTENDPITYDDDRTPDGKDH 60 Query: 49 RTTSDYT----LLRQYAKNLDADI-------VFLQEMGSYNAVAKVFPKNTWCIFYSTER 97 T Y + + + AD+ + L E+ + V + + + Sbjct: 61 WTEEIYQDKVSKMARVISEIGADVTNNAPALIGLAEIENRKTVEALANDPK---LLAKDY 117 Query: 98 LINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 I H I A+ K + + + D+ R R + + ++G Sbjct: 118 GIAHFDSPDRRGIDVALMYQKALFKPTNISKHELLIYDNVDTSKRVYTRDQLLVSGMLDG 177 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP---FVIAGDF 211 I V+ H S ++ + A L I +S P + GD Sbjct: 178 DMIHVIVNHWPSRSGGEARSRKKRIA-------AAALNMKIIDSLQSNDPYAKIITMGDL 230 Query: 212 NRKINYLGNNDDFWK-----TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 N + + D ++ Sbjct: 231 NDDPTSPSVKKTMKASGKKEKVKDDMLYNPMEPMFKKGIGTLAYRDGWNLFDQIIISAPL 290 Query: 267 YK------FLIQESFSEILYNEDDIKSRGKRL-------------SDHCPISI 300 + Y + SDH P+ + Sbjct: 291 LDKDFSTYRYYKAGIYNKNYLSNPKGRYKGYPYRSFANGGYTGGYSDHFPVYV 343 >gi|218130390|ref|ZP_03459194.1| hypothetical protein BACEGG_01979 [Bacteroides eggerthii DSM 20697] gi|217987391|gb|EEC53721.1| hypothetical protein BACEGG_01979 [Bacteroides eggerthii DSM 20697] Length = 372 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 37/349 (10%), Positives = 87/349 (24%), Gaps = 62/349 (17%) Query: 8 ALVFFLVPCTASV-------AQKVRLVSWNINTLSEQEGVSLWKNSVK-----------R 49 ALVF +A + R++ +N+ L + +L + + Sbjct: 28 ALVFLAFLSSAPLYGQIKKDTLTFRIMGYNVENLFDCRHDTLKNDYEFLPDAVRHWNYFK 87 Query: 50 TTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105 + + + +V L E+ + + + + + I + Sbjct: 88 YKKKLDAIARVIIAVGKWTPPALVALCEVENDSVLHDL---TRYSILREAGYRYVITHSP 144 Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHL 164 I A+ ++ ++L L S R + + + +N + V H Sbjct: 145 DERGIDVALLYQRGIFKLLSSQ-SLPVTGLHKSSRPTRDILHVSGLLLNRDTLDVFVAHF 203 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 S Y + + A + + +I GDFN Sbjct: 204 PSRSGGAKASEPYRLLAAQRLKNATDSLFHVRTHPQ----IIIMGDFNDYPGNKSVQKIL 259 Query: 225 WKT--------IDPNDSLIRFPKEKDSR--CNANKNLRNKIPIDYFVMDQNAYKFLIQ-- 272 + ++ + + K +D+ ++ N Sbjct: 260 KAGIPPAETDSLKSQMLYHLLARKSAANKHFGSYKYQGEWGLLDHIILSGNLLTATSPLY 319 Query: 273 -------------------ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + SDH P+ ++ Sbjct: 320 TAEDKADVFHAPFLLTEDKKYGDNQPFRTYYGMKYQAGYSDHLPVWAEF 368 >gi|197105436|ref|YP_002130813.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1] gi|196478856|gb|ACG78384.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1] Length = 259 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 87/303 (28%), Gaps = 68/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+++ + + ++ + D+ LQE+ + Sbjct: 1 MRIATWNVNSIN----------------ARLETVVRWFEAAQPDVACLQEIKCVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + +A+ K G + R Sbjct: 41 ------KFPAEPFERLGYNLAIHGQKTYNGVALLSKRPLEDVTR----GLPEGDGDEHAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + V I+L + + + + Y + L + Sbjct: 91 YIEAVV--SGPQPVRVASIYLPNGNPVGTEKFAYKLA------WMGRLHRHAQNLLKLEE 142 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGD+N + + ++ + + + + Sbjct: 143 PLVLAGDYNVIPEPRDAEFPKNWEDDALFQPQSRAAFRALKNLGLTEAYLQADGAPGAYT 202 Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 N I ID+ ++ A L + + ++ SDH P+ + Sbjct: 203 FWDYQAGAWQRNNGIRIDHALLSPQAADLLRGVTIHRDV-------RGWEKPSDHVPLVV 255 Query: 301 DYD 303 + D Sbjct: 256 ELD 258 >gi|113953146|ref|YP_731259.1| exodeoxyribonuclease III [Synechococcus sp. CC9311] gi|113880497|gb|ABI45455.1| exodeoxyribonuclease III [Synechococcus sp. CC9311] Length = 274 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 84/304 (27%), Gaps = 67/304 (22%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + SWN+N + + + ++ +AD++ LQE Sbjct: 3 IASWNVN----------------SVRTRLDHVLNWLEHSEADLLALQET----------K 36 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + + +A+ + + D A Sbjct: 37 VDDPQFPLEPFLQRGYQIHIHGQKAYNGVALISRTPLEDVRMGFSAELLDDAEAKEL-GA 95 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + ++ + V+++++ + L S + +Y S L+ ++ + P Sbjct: 96 QKRVISALIDGVRVVNLYVPNGSSLSSDKYSYKLS------WLSCLERYLRAIQTRDEPL 149 Query: 206 VIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + GDFN + + + P+ L + + Sbjct: 150 CVMGDFNIGLEARDLPDPDRLTGGIMASDRERNALKAALGPD--LQDAFRLFEPNSGHWS 207 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ +D+ S D + + SDH P+ + Sbjct: 208 WWDYRSGAWDRGRGWRIDHIYLDETLRAVARSCSI-------DKQERGRIQPSDHAPVVV 260 Query: 301 DYDF 304 D + Sbjct: 261 DLAW 264 >gi|298386087|ref|ZP_06995644.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 1_1_14] gi|298261315|gb|EFI04182.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 1_1_14] Length = 611 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 84/304 (27%), Gaps = 63/304 (20%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K L + L+ + +RL+++NI + +GV D+ + Sbjct: 4 MKKIFLLISAILLIVPVQAQRTLRLMTYNIKNATGMDGVC-----------DFQRIANVI 52 Query: 62 KNLDADIVFLQEMG---SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N D+V +QE+ + + V + + I + Sbjct: 53 NNASPDVVAVQEVDSVTNRSNQKYVLGEIAERTQMYACFAPAID----YDGGKYGIGLLS 108 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K + Q+ L G R R + E HL Sbjct: 109 KKAPLHLQAIALPG------REEARALILAEFE----DYIYCCTHLSLTEED-------- 150 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + LK + K+ P +AGD N + + F Sbjct: 151 -----RMKSLEILKTFAASYKK---PLFLAGDMNAEPESDFIK----------ELQKEFR 192 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + K IDY + K S + SDH PI Sbjct: 193 ILSNPKQHTFPAPAPKETIDYVAAFKQNDKGFAVVSSEVVNEPV---------ASDHRPI 243 Query: 299 SIDY 302 ++ Sbjct: 244 VVEL 247 >gi|254787392|ref|YP_003074821.1| extracellular nuclease [Teredinibacter turnerae T7901] gi|237685410|gb|ACR12674.1| extracellular nuclease [Teredinibacter turnerae T7901] Length = 935 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 46/352 (13%), Positives = 92/352 (26%), Gaps = 73/352 (20%) Query: 15 PCTASVAQKVRLVSWNINTLSEQ---------EGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 V +R+ S+N+ L + N+ + T +LD Sbjct: 488 AAAPQVDGDLRVTSFNVLNLFKTLDNGASTALGHDPRGANNAEELTRQLQKTVNAIVSLD 547 Query: 66 ADIVFLQEMGSY--------NAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAV 116 AD++ L E+ + A+ + + +T + R +D I + Sbjct: 548 ADVLGLVELENEFDPVNDGSTAIEMLVNALNSRLGSNTFAYVYPGSRFVGSDAIAVGVIY 607 Query: 117 RKKNVRVLQQ------------------SYPLLGAKDSFSRAGNRRAVELLVE--INGKK 156 + V + + + + NR ++ + G Sbjct: 608 KPAVVAIADGSAPAILDDTVAATLPIFADHDFVNEPLFDGPSTNRASLAVTFTHISGGDN 667 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSC---------SLLSQQAQWLKDWITQKKE--SLVPF 205 V+ HLKS D L + + A+ + W+ + Sbjct: 668 FTVVVNHLKSKGSGDGLASDDPNADHTDGAGAWNQRRLDGARAVDAWLQTAPTGIADNDA 727 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 +I GD N +S + + +DY ++ + Sbjct: 728 IIMGDLNAYAAEAPLTFLLSNGYSNVES---------AESYSYVFDGQVGTLDYVLLSDS 778 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRL---------------SDHCPISIDY 302 Y Q + +E D SDH P+ + Sbjct: 779 LYSKFEQAEIWHVNSDEADALDYNTDYGRSLTYYDGSTATRNSDHDPVLVGL 830 >gi|312883008|ref|ZP_07742739.1| hypothetical protein VIBC2010_06964 [Vibrio caribbenthicus ATCC BAA-2122] gi|309369168|gb|EFP96689.1| hypothetical protein VIBC2010_06964 [Vibrio caribbenthicus ATCC BAA-2122] Length = 357 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 93/304 (30%), Gaps = 21/304 (6%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + S N+ ++ + + L+ADI+ LQE+ Sbjct: 53 PKEKTLTFASANLFNFLAPPNACYEFDNIYDNQAWQDKCRWTQHTLAELNADIIGLQEVF 112 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 S ++ + + +++T K A+A R + + S L Sbjct: 113 SIGCARELMAEIGYP-YFATVDEPEVEKDYIYAKPVVALASRYPIISCMAVS-ELTNHDH 170 Query: 136 SFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCF----LDSLENTYSPSCSLLSQQAQW 190 +R+ + +EI K+ V HLKS S +A Sbjct: 171 LNIPNFSRKPICAHIEIPKLGKMTVYVCHLKSQRPTETEDLEPLVARWLSAIQRGWEAAM 230 Query: 191 LKDWIT-QKKESLVPFVIAGDFNRKINYL---GNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 L+ ++ + + P V+ GD N+ ++ + T D N Sbjct: 231 LRAFMQTEYAKCPTPTVLMGDMNQSLSSDILASLTEPAHTTTDLNLKDSWSLFGTPDSRV 290 Query: 247 ANKNLRNKI-PIDYFVMDQNAYK------FLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 K +DY ++ Q I + + + + + SDH ++ Sbjct: 291 PTHYHYAKGNVLDYLLVSQEFDPDWPCSMLEIADYIVLDKHLINPHSQQDRYASDHAFVA 350 Query: 300 IDYD 303 + + Sbjct: 351 LTVN 354 >gi|304391804|ref|ZP_07373746.1| exodeoxyribonuclease III [Ahrensia sp. R2A130] gi|303296033|gb|EFL90391.1| exodeoxyribonuclease III [Ahrensia sp. R2A130] Length = 265 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 45/301 (14%), Positives = 89/301 (29%), Gaps = 62/301 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWNIN + + +L ++ K + DIV LQE+ S + Sbjct: 1 MKIASWNING----------------IKARHDVLIEWLKQAEPDIVGLQEIKSVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + ++ + +A+ + L + R Sbjct: 41 ------NFPASEIEALGYNVQTHGQKGFNGVALLSRLPFDEVNRGLPLLRESEDEDEQAR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + I GK + V+ ++L + +D + L W + Sbjct: 95 F-IEGVFSIEGKSLRVVSLYLPNGNPVDDP-----RKFDYKLRWMDRLHAWAADRLALEE 148 Query: 204 PFVIAGDFNRKINYLG---NNDDFWKTIDPNDSLIRFPKEKDSRC-----------NANK 249 P ++AGD+N + +++ RF K+ Sbjct: 149 PLILAGDYNVIPQPNDCWNPKVWEGDALFRDETRSRFEALKNLGFTEALRSSANADGIYT 208 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ +M A D ++ SDH PI + Sbjct: 209 FWDYQAGAWPKNHGIRIDHLLMSAEAADMFNGCGI-------DSFVRDWEKPSDHVPIWL 261 Query: 301 D 301 + Sbjct: 262 E 262 >gi|160888829|ref|ZP_02069832.1| hypothetical protein BACUNI_01248 [Bacteroides uniformis ATCC 8492] gi|317479428|ref|ZP_07938561.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] gi|156861728|gb|EDO55159.1| hypothetical protein BACUNI_01248 [Bacteroides uniformis ATCC 8492] gi|316904394|gb|EFV26215.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] Length = 352 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 41/350 (11%), Positives = 91/350 (26%), Gaps = 65/350 (18%) Query: 8 ALVFFLVPCTASVAQ------KVRLVSWNINTLSEQEGVSLWKNSV-----------KRT 50 ++F L P + Q R+VS+N+ L + +L + + Sbjct: 9 VILFLLCPYISLYGQEGKDTLTFRIVSYNVENLFDSRHDTLKNDYEFLPDATRHWNYSKY 68 Query: 51 TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 + + +V L E+ + + + + + + ++ Sbjct: 69 RKKLDNIARVIIATGGWTPPALVALCEVENDSVMRDL---TRYSALREADYRYVMTQSPD 125 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLK 165 I A+ ++ ++L L K + R + + + +N + VL H Sbjct: 126 KRGIDVALLYQRNLFKLLSYQ-SLPVDKPRKNSRPTRDILHVSGLLLNRDTLDVLVAHFP 184 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDD 223 S S A+ +K I V+ GDFN + Sbjct: 185 SRSGG------ARESEPYRLLAARKVKHAIDSLYTIRRHPQIVLLGDFNDYPENKSVKEV 238 Query: 224 F--------WKTIDPNDSLIRFPKE--KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273 ++ P + + K +D+ ++ + Sbjct: 239 LEAAAPSTLQDSLRPQKLYHLLAGKAKTRKHFGSYKYQGEWGLLDHIIVSGTLLQEHAPL 298 Query: 274 SFSEI---------------------LYNEDDIKSRGKRLSDHCPISIDY 302 E + SDH P+ ++ Sbjct: 299 YTEEAKADVFCLPFLLTRDKKYGGQQPFRTYYGMKYQGGYSDHLPVYAEF 348 >gi|85716516|ref|ZP_01047487.1| Exodeoxyribonuclease III xth [Nitrobacter sp. Nb-311A] gi|85696705|gb|EAQ34592.1| Exodeoxyribonuclease III xth [Nitrobacter sp. Nb-311A] Length = 279 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 84/305 (27%), Gaps = 71/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +R+ +WN+N L + D+V LQE+ Sbjct: 14 MRIATWNVN----------------SIRQRLDHLITWLGETTPDVVCLQEIKCVDEQFPR 57 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + +A+ K + D SR Sbjct: 58 EAIEALGYNVVTH------------GQKTFNGVALLSKFPFDETRPRLAGDDGDVQSRF- 104 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E +V + + + ++L + ++ + Y + L ++ ++ +S Sbjct: 105 ----LEGVVSLKQGIVRIACLYLPNGNPPNTEKYPYK------LKWISRLIEYSKERLKS 154 Query: 202 LVPFVIAGDFNRKIN-------YLGNNDDFWKTIDPNDS-------LIRFPKEKDSRCNA 247 FV+AGDFN +D ++ L + Sbjct: 155 EEAFVLAGDFNVIPAPRDVYNPASWVDDALFRPHTRQAFQTLLGLGLTDALRAASDAAGE 214 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ A L D ++ SDH P+ Sbjct: 215 YTFWDYQAGAWQKNNGLRIDHLLLSPQASDRLGGVGI-------DRHVRGWEKASDHVPV 267 Query: 299 SIDYD 303 ID D Sbjct: 268 WIDLD 272 >gi|288803857|ref|ZP_06409283.1| endonuclease/Exonuclease/phosphatase [Prevotella melaninogenica D18] gi|288333691|gb|EFC72140.1| endonuclease/Exonuclease/phosphatase [Prevotella melaninogenica D18] Length = 347 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 45/351 (12%), Positives = 102/351 (29%), Gaps = 64/351 (18%) Query: 2 IRKYVLALVFFLVPCTASVAQK-VRL---VSWNINTLSEQEGVSLWKN-----------S 46 +RK +L L ++ T++ AQK + +N+ L + + + Sbjct: 1 MRKLLLVLFCAVLFGTSASAQKKFSVYAIGFYNVENLFDTTHDEGKNDHDFTPTGSYQWN 60 Query: 47 VKRTTSDYTLLRQYAKNLDADI--------VFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + + + + D+ + L E+ + + + + + Sbjct: 61 EMKYSHKLHNMASVLAEMGTDVLPNIGCAAIGLAEVENDHVMNDLISQPE---LAKRGYK 117 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 H + + I A+ K V P + S R + + + G+ + Sbjct: 118 YVHIEGPDHRGIDCALIYNPKLFTVRDTKLVPYVYDLPKDSTRATRGFLTVSGTLAGEHV 177 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 ++ HL S Q + LKD + +++ V ++ GD N Sbjct: 178 TIIVCHLPSRGAGSYYRELGGK-------QIKALKDSL-LREDPKVKVLVMGDMNDDPTN 229 Query: 218 LGNNDDFWKTID------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 ++ + + + + + D +M N Sbjct: 230 KSIHECLSAKGEISEVGANDMYNPWYNVLVKEGTGSLQYQGKWNLFDQIIMTPNLLNKAG 289 Query: 272 QESFSEILYNEDDIKSRGK-----------------------RLSDHCPIS 299 ++ FSE+ + ++ I R SDH P+ Sbjct: 290 KKDFSELKFWKNQIFRRDYLFQESGKYKGNTKRTTAGGVWLDGYSDHLPVV 340 >gi|229822156|ref|YP_002883682.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM 12333] gi|229568069|gb|ACQ81920.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM 12333] Length = 437 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 80/306 (26%), Gaps = 58/306 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-------- 74 +R+++WNI+T + + + + D+V L E+ Sbjct: 52 DLRVMTWNIHTAVAPDAPGVVDEP---------RIAAVIRAEAPDVVVLNEVHRDAPGPG 102 Query: 75 ---GSYNAVAKVFPKNTW-CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ-QSYP 129 +A++ + + ++ + + V ++ V P Sbjct: 103 SHGDQPARLAELLAADGYVHTWFGLTEVDLPHEGAVLPGSSNGNVVMSRHPFVGGGVVVP 162 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 L R + + V++ G V+ S L Q + Sbjct: 163 LPNENYEPGGKLRRSLLTVTVDVPGLGDVVVHATHLSTPGSAVLVEDQKE-------QLR 215 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGN-----NDDFWKTIDPNDSLIRFPKEKDSR 244 + D + + VP V+AGD N + N+ I + + + D Sbjct: 216 IVLDHVDAR----VPSVLAGDLNIWTTDVPTQPYSQNNLMQSWIAEDHLADTWRQVNDPG 271 Query: 245 CNANKNLRN--------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 IDY S + SDH Sbjct: 272 AGPTMTASYGRPESPHPDRRIDYVFATPAFDVVAGHVSLV------------DRFASDHL 319 Query: 297 PISIDY 302 + +D Sbjct: 320 GVVMDL 325 >gi|15597741|ref|NP_251235.1| exonuclease III [Pseudomonas aeruginosa PAO1] gi|218891476|ref|YP_002440343.1| exonuclease III [Pseudomonas aeruginosa LESB58] gi|9948603|gb|AAG05933.1|AE004682_5 exodeoxyribonuclease III [Pseudomonas aeruginosa PAO1] gi|218771702|emb|CAW27476.1| exodeoxyribonuclease III [Pseudomonas aeruginosa LESB58] Length = 270 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 38/312 (12%), Positives = 80/312 (25%), Gaps = 76/312 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L + D++ LQE Sbjct: 1 MKIVSFNINGL----------------RARPHQLAALIERHQPDVIGLQE---TKVADDQ 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + + H +A+ + + ++S R Sbjct: 42 FPQ-------AEIEALGYHVHYHGQKGHYGVALLSRQAPLELHRGFPSDGEES-----QR 89 Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + G I V++ F + + L+ + + Sbjct: 90 RFIWGTFSDAQGNPITVMN-----GYFPQGENREHPTKFPAKQRFYADLQSLLENSFKPE 144 Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241 V+ GD N ++L ++ T+ + F Sbjct: 145 QALVVMGDINISPEDCDIGIGEENRKRWLKTGKCSFLPEEREWLATLKNWGLVDSFRALN 204 Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + + D + Sbjct: 205 PEVNDRFSWFDYRSRGFEDNPKRGLRIDVILASRVLQSRFKDAGI-------DYDLRGME 257 Query: 291 RLSDHCPISIDY 302 + SDH PI ++ Sbjct: 258 KPSDHAPIWLEL 269 >gi|291302070|ref|YP_003513348.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] gi|290571290|gb|ADD44255.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] Length = 268 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 81/303 (26%), Gaps = 57/303 (18%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 ++AL +V VR++++NI + + D Sbjct: 17 IVALTGPVVATPQEAKSVVRVLNYNIQAGRGAGEDPNVDPP------NIPRTAAAIREHD 70 Query: 66 ADIVFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 DIV LQE+ + VA++ + ++ + A+ K Sbjct: 71 PDIVTLQEVHQPDTSGADQVAQLAAELDMNAYFGPADGNGSGGQA-------GNAILTKL 123 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 V + + L D+ + R +++ G + S D++ Sbjct: 124 PIVERVNRRLPDDPDTNNVK--RALAGAKLDLGGGAFIRVFTTHLSPGLSDAV------- 174 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + Q +W D++ P + GDFN + + + P Sbjct: 175 VAEREAQGRWALDYL----SHSGPLLFTGDFNERP-ENRIHAWALADGFADTGGEVAPDP 229 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ID+ SDH P+ I Sbjct: 230 THGD----------ARIDFVYARG---------------VTATAGLVPDTDASDHRPVVI 264 Query: 301 DYD 303 D + Sbjct: 265 DLE 267 >gi|226228652|ref|YP_002762758.1| hypothetical protein GAU_3246 [Gemmatimonas aurantiaca T-27] gi|226091843|dbj|BAH40288.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 1078 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 42/338 (12%), Positives = 88/338 (26%), Gaps = 55/338 (16%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWK-----------NSVKRTTSDYTLLRQYAKN 63 SV +R+ S+N+ + +S Sbjct: 648 TTPTSVGGTLRVSSFNVLNYFNSFSGCTYGVGGGSTDCRGADSQTEFNRQVPKTVAALMG 707 Query: 64 LDADIVFLQEMGSY------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 L+AD++ + E+ + + + NT+ + + ++ I Sbjct: 708 LNADVLGIVEIENDGYGTSSAIAHLVSQLNAQAGPNTYAFINADAATGQTNALGTD-AIK 766 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKD---SFSRAGNRRAVELLV-EINGKKIWVLDIHLKSF 167 A+ + V + + L NR A+ + +G + + H KS Sbjct: 767 VALIYKPARVTPVGNTAALNSVAFVNGGDGAPRNRPALAQAFQQADGARFIAVVNHFKSK 826 Query: 168 ---CFLDSLENTYSPSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNND 222 C + ++ A L++W+T +I GD N Sbjct: 827 GSACNAGDAGDGQGNCNAVRVAAATQLRNWLTTNPTGTGDPDVLILGDLNAYAKEDPI-- 884 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + + + +D+ + + + + I +E Sbjct: 885 ---MVLRNAGFIDLLESRIGPNAYSYVFDGQWGYLDHAMASSSIASQITGVTTWHINADE 941 Query: 283 DDIKSRG-----------------KRLSDHCPISIDYD 303 I R SDH P+ I Sbjct: 942 PSILDYNTDYKSAGQIVSLTDNSAFRTSDHDPVLIGLT 979 >gi|148975846|ref|ZP_01812635.1| Endonuclease/exonuclease/phosphatase [Vibrionales bacterium SWAT-3] gi|145964591|gb|EDK29844.1| Endonuclease/exonuclease/phosphatase [Vibrionales bacterium SWAT-3] Length = 430 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 96/296 (32%), Gaps = 32/296 (10%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 S A + ++++N+ L ++ + + K+ D+VF+QE+ Sbjct: 158 TTPPSDANSINILTYNVWLLPYIGEYMNDRDI---------RIAEAVKSH--DVVFMQEV 206 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 ++ Y + +L +N + K V Q + + Sbjct: 207 FRRENELRLNADMRLHFQYVSHKLDG----GGSNTYDGGVITYSKYPIVEQAQH-VFDNC 261 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A ++ + + + + + ++HL S+ ++ +Q + + Sbjct: 262 RGTDCAADKGVLYTKIIKDSRPYHLFNLHLGSW--------NSREHRNIRMRQVGEILAF 313 Query: 195 ITQ-KKESLVPFVIAGDFN-RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-----A 247 + Q P + GDFN K + + + +D + ++ + Sbjct: 314 VEQLGLPENEPVIFGGDFNIAKHKFPLDFTQMLRVLDLQEPPLKGSLAHSYDPLVNQNLS 373 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + +DY + N + N DD LSDH +S ++ Sbjct: 374 DSDQSAQERLDYLLYSNNGSVVASSSKIEVL-RNFDDDMWGVWDLSDHLAVSARFE 428 >gi|123965783|ref|YP_001010864.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9515] gi|123200149|gb|ABM71757.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9515] Length = 281 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 84/301 (27%), Gaps = 63/301 (20%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + +WN+N + + + + KN++ DI+ LQE + Sbjct: 3 IATWNVN----------------SVRTRLSQIINWIKNVNPDILCLQETKVIDN------ 40 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + + + +A+ K + S N Sbjct: 41 ----SFPLTPFEELGYEVTVHGQKSYNGVAIISKFKIENIIKG-FTNENEEKSNFLNFNE 95 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + L+ + + ++++++ + LDS + Y + L ++ ++ Sbjct: 96 QKRLISADINGLKIINVYVPNGSSLDSDKFDYK------IKWLNHLSSFLDKQVREDDLV 149 Query: 206 VIAGDFNRKINYLGNNDD-------FWKTIDPN-------DSLIRFPKEKDSRCNANKNL 251 GDFN + + I+ I + + Sbjct: 150 CFVGDFNIAPFDIDIHCPQKYEGGIMASKIEREALKKVIKGRFIDSFRIFEKNTGHWSWW 209 Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ + N L + + + SDH P+ I+ Sbjct: 210 DYRNNAYELNKGWRIDHIYISNNLSSQLKSCVI-------ERSQRENSQPSDHAPVLINL 262 Query: 303 D 303 + Sbjct: 263 E 263 >gi|87123786|ref|ZP_01079636.1| Exodeoxyribonuclease III xth [Synechococcus sp. RS9917] gi|86168355|gb|EAQ69612.1| Exodeoxyribonuclease III xth [Synechococcus sp. RS9917] Length = 276 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 80/304 (26%), Gaps = 68/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ SWN+N+L + + D++ LQE + Sbjct: 1 MRIASWNVNSLRT----------------RLDHVLNWLNAAQPDLLCLQETKVADPQFPL 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F W + +A+ + + + + A Sbjct: 45 EAFTSRGWQATVH------------GQKAYNGVALVSRTPLEDVR--LGFSGELADEEAE 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++ + V+++++ + L + Y + L+ ++ + +E Sbjct: 91 ELGTQKRVISALLDGVRVVNLYVPNGSSLKLEKYPYK------LRWLACLQRYLQRPQER 144 Query: 202 LVPFVIAGDFNRKINYLGNNDD--------------FWKTIDPNDSLIRFPKEKDSRCNA 247 P + GDFN + +D D+L + + Sbjct: 145 GEPLCVVGDFNIALESRDMHDPDRLTGGIMASEPERAALKAALGDTLHDVFRVFEPDTGH 204 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ + + + SDH P+ Sbjct: 205 WSWWDYRSGAWDRDRGWRIDHIYLCDELLARARGCLIH-------KQERGRDQPSDHAPV 257 Query: 299 SIDY 302 D Sbjct: 258 VADL 261 >gi|333003732|gb|EGK23268.1| exodeoxyribonuclease III [Shigella flexneri VA-6] Length = 268 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K + + R Sbjct: 42 FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + +Q Q L++++ + + Sbjct: 90 RIIMAEIPSLLGYVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDN 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N L ++ + + F Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGVVDTFRHANP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + ++ D ++ S Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWATF 266 >gi|329298723|ref|ZP_08256059.1| exonuclease III [Plautia stali symbiont] Length = 268 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 83/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +S+NIN L S L + D++ LQE + Sbjct: 1 MKFISFNINGL----------------RSRPHQLAALVEQHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K V + +DS R Sbjct: 42 FP-------LEEVSKLGYNMFYHGQKGHYGVALLTKTQPVAVRRGFPDDGEDS-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + I V++ F + + + L+ ++ Q+ + Sbjct: 90 RLIMAEIPSPIGDITVIN-----GYFPQGESRDHPIKFPAKEKFYRDLQSYLEQQLAADK 144 Query: 204 PFVIAGDFNRK---------------------INYLGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N ++L ++ + + + ++ Sbjct: 145 PVLIMGDMNISSTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLLQWGLVDTWREKNP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + I D + S Sbjct: 205 ETADRFSWFDYRSKGFDDNRGLRIDLLLASPPLASRCIDSGI-------DYAIRSMDKPS 257 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 258 DHAPVWSSF 266 >gi|329889440|ref|ZP_08267783.1| endonuclease/Exonuclease/phosphatase family protein [Brevundimonas diminuta ATCC 11568] gi|328844741|gb|EGF94305.1| endonuclease/Exonuclease/phosphatase family protein [Brevundimonas diminuta ATCC 11568] Length = 251 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 39/284 (13%), Positives = 76/284 (26%), Gaps = 50/284 (17%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNAVA 81 RL+++N++ + D + + D+V LQE+ + Sbjct: 3 RLLTYNVHRCVGVDR-----------KLDVHRIADVIAEHEPDVVCLQELDVGRARTGWV 51 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + S + A+ L ++ L Sbjct: 52 DQADAIAQRLAMSVQFHPAMKVEA----ELYGDAILTHRPERLVRAAALPTLPGLKG-LE 106 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL--KDWITQKK 199 R A+ V+ +G + +L+ HL Q L +DW+ Sbjct: 107 PRGALWSAVDFDGVVVNILNTHLGLVP-------------REQRLQVAALVGRDWLGDPM 153 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 P ++ GDFN + + +D + I ID+ Sbjct: 154 -CDGPTILTGDFNAT-SITRPYQALTRRLDDAQR----RLGLKPSIKTFPSSFPAIRIDH 207 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + SDH P+ ID++ Sbjct: 208 CFVSRE---------IRVTGARTPSSP-LARAASDHLPLIIDFE 241 >gi|323702006|ref|ZP_08113675.1| Endonuclease/exonuclease/phosphatase [Desulfotomaculum nigrificans DSM 574] gi|323533092|gb|EGB22962.1| Endonuclease/exonuclease/phosphatase [Desulfotomaculum nigrificans DSM 574] Length = 229 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 32/282 (11%), Positives = 79/282 (28%), Gaps = 57/282 (20%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 Q +++VS+NI + + + A ++ LQE+ + + Sbjct: 2 QTIKVVSYNIRYARGMDD-----------QVNLNRVAAVLAWSGAQLMGLQEVDKHLPRS 50 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + AV + + YPL + Sbjct: 51 GFRHQAKHLGWLLHRHWVFAPNVKWGPWAQYGNAVLSYWPIIEHKHYPLPS------KGE 104 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R +E+ V IN + + HL ++ + ++ + + Sbjct: 105 PRGLLEVEVNINNRAVAFFCTHLGL----------------SREERLEQVEIILKVMTAA 148 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 P ++ GDFN + + + + ++ + + +D+ Sbjct: 149 NKPSILVGDFNDDRDSQ-EFNLISRLLQDATAITGGFE---------TFPADNEQLDFVF 198 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + R SDH P+ ++ Sbjct: 199 VSHHWQVLAARPII--------------SRASDHLPVLVELS 226 >gi|294667686|ref|ZP_06732898.1| nuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602526|gb|EFF45965.1| nuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 1193 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 39/340 (11%), Positives = 93/340 (27%), Gaps = 54/340 (15%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69 P A V + ++N+ + + + +N DI+ Sbjct: 578 PAPMPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNYLHTPDIL 637 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK-----KN 120 E+ + + + + + + ++ + + + I V+ Sbjct: 638 GTVEVENLSVLQTLAARVNADAVAAGQQDPRYVAYLQEGNDVGGIDVGFLVKTADIAGGV 697 Query: 121 VRVLQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGK-----KIWVLDIHLKSFC 168 RV S G +++ R + L ++ + + +H +S Sbjct: 698 PRVEVLSIAQEGKTATWTEPAGGVSLLNDRPPLVLTANVHQADGRTLPLTAIVVHQRSLN 757 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFW- 225 ++ + + + QA++L + Q+ ++ GDFN G D Sbjct: 758 GAETDDAAGTRIRAKRQAQAEYLARLLQTRQQLNPDEKVLVMGDFNAFEFNDGYVDAMGT 817 Query: 226 -----------------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 + D + + N +D+ + ++ + Sbjct: 818 VTGKPAPDAQTVVGGDGADLVNPDYTDLTWFNTPDQSYSYAFDGNVQSLDHILANEALMR 877 Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300 S S + RLSDH P + Sbjct: 878 APQIASLSVGHARINADFPGTARNDANTPTRLSDHDPTVV 917 >gi|294627209|ref|ZP_06705796.1| nuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598448|gb|EFF42598.1| nuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 1193 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 39/340 (11%), Positives = 93/340 (27%), Gaps = 54/340 (15%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69 P A V + ++N+ + + + +N DI+ Sbjct: 578 PAPMPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNYLHTPDIL 637 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK-----KN 120 E+ + + + + + + ++ + + + I V+ Sbjct: 638 GTVEVENLSVLQTLAARVNADAVAAGQQDPRYVAYLQEGNDVGGIDVGFLVKTADIAGGV 697 Query: 121 VRVLQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGK-----KIWVLDIHLKSFC 168 RV S G +++ R + L ++ + + +H +S Sbjct: 698 PRVEVLSIAQEGKTATWTEPAGGVSLLNDRPPLVLTANVHQADGRTLPLTAIVVHQRSLN 757 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFW- 225 ++ + + + QA++L + Q+ ++ GDFN G D Sbjct: 758 GAETDDAAGTRIRAKRQAQAEYLARLLQTRQQLNPDEKVLVMGDFNAFEFNDGYVDAMGT 817 Query: 226 -----------------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 + D + + N +D+ + ++ + Sbjct: 818 VTGKPAPDAQTVVSGDGADLVNPDYTDLTWFNTPDQSYSYAFDGNVQSLDHILANEALMR 877 Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300 S S + RLSDH P + Sbjct: 878 APQIASLSVGHARINADFPGTARNDANTPTRLSDHDPTVV 917 >gi|116254404|ref|YP_770242.1| phosphatase [Rhizobium leguminosarum bv. viciae 3841] gi|115259052|emb|CAK10163.1| putative phosphatase [Rhizobium leguminosarum bv. viciae 3841] Length = 288 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 42/322 (13%), Positives = 83/322 (25%), Gaps = 79/322 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80 + S+NI +G D + + AD++ LQE+ S N Sbjct: 1 MNFASYNIQYGFGLDG-----------RYDLARIARSL--EGADVIALQEVTRGFSRNGF 47 Query: 81 AKVFP------KNTWCIFYSTERLINHSKRDS-----NNDIHTAIAVRKKNVRVLQQSYP 129 A + + + ++ + + V + V ++ Sbjct: 48 ADMAADIASFFPDYFWVYGPACDMHVEADEGGLQPVRGTRFQFGNMVLSRWPIVSTRTLL 107 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 L ++ R A E +++ G I V +HL +Q + Sbjct: 108 LPRSRTIGKINLQRGATEAVIDAPGGAIRVYSVHLDHVSAD------------ERIRQLE 155 Query: 190 WLKDWITQKKESL-----------------VPFVIAGDFNRKINYLGN-------NDDFW 225 +L I + +VI GDFN + + Sbjct: 156 FLNAHINAFVQEGGSLTGGGEFDLPEPPLPEDYVIMGDFNMEPESPEYCALAGAGGGYYG 215 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 + + F K + ++ +DY + L Sbjct: 216 RVARIGTPVDAFAALKTYSPESYSWMDPEDHGKRMHLDYCFVSCGLQSRLKSAWI----- 270 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 SDH P+ ++ Sbjct: 271 ------DTQSVGSDHFPLWVEI 286 >gi|110798703|ref|YP_695757.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens ATCC 13124] gi|110673350|gb|ABG82337.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens ATCC 13124] Length = 262 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 93/291 (31%), Gaps = 45/291 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+ + + + W + + + K+ DI+ QE + Sbjct: 4 LKVMTFNLKYDFKAQDNNEW-------SQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMD 56 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAKDSF 137 + + + + + D AI K VL+ P + F Sbjct: 57 DLLDEYS-------WVGEDREGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDF 109 Query: 138 SRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + + R +L + +I+G KI + + HL E ++ ++ + Sbjct: 110 NSSLPRICTKLKLKDKISGLKIDIYNTHL-----DHESELAREEGIKIILKEVK------ 158 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP--KEKDSRCNANKNLRN 253 K P++I GDFN + N + + + + K Sbjct: 159 KNYKIYKTPYIIMGDFNCYLEDNIFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY 218 Query: 254 KIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY + + N DD K G SDH P+ + + Sbjct: 219 DGRIIDYILYSKE---------CEIKSLNIDDRKINGGYPSDHYPVICELE 260 >gi|121999171|ref|YP_001003958.1| endonuclease/exonuclease/phosphatase [Halorhodospira halophila SL1] gi|121590576|gb|ABM63156.1| Endonuclease/exonuclease/phosphatase [Halorhodospira halophila SL1] Length = 277 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 30/293 (10%), Positives = 80/293 (27%), Gaps = 54/293 (18%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIV 69 + +R+VS+NI + + + + + + D+V Sbjct: 21 SPEAPATIRVVSYNIQNAIATSRYHHYFTRGWKHVLPDRQRQGNLERIGGWIEPY--DLV 78 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 LQE+ + + + + + + + ++ N + + Sbjct: 79 GLQEVDAGSFRTGFMNQVEHLAYKADFP-----YWYIQTNRNMGRLAQQSNGLLARYRPA 133 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + R A+++ + + V+ +H+ +Q Sbjct: 134 EIREHRLPGLIPGRGALQIRFGSGSEALNVIQVHMALG-------------RRTRMRQMD 180 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 +L + + ++ GD N + + + + Sbjct: 181 FLAELVNAH----RHIIVMGDLNCQADSPE-------LLRLGRRTDLSEPIH--GLHTFP 227 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + R K ID+ ++ + LSDH PI+++ Sbjct: 228 SWRPKHNIDHILISSTL--------------QVQRARVLEHALSDHLPIAMEL 266 >gi|77464360|ref|YP_353864.1| endonuclease/exonuclease/phosphatase fa [Rhodobacter sphaeroides 2.4.1] gi|77388778|gb|ABA79963.1| possible Endonuclease/Exonuclease/phosphatase fa [Rhodobacter sphaeroides 2.4.1] Length = 339 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 42/341 (12%), Positives = 91/341 (26%), Gaps = 62/341 (18%) Query: 21 AQKVRLVSWNINTLS----EQEGVSLWKNSVKRTT----SDYTLLRQYAKNLDADIVFLQ 72 A+ +R+ ++N+ + + + R + L LDAD + + Sbjct: 2 ARPLRIATYNVEWFNGLFDDHGRLRTDNELSGRYEITRRNQIESLGIVFTALDADAIMVI 61 Query: 73 EMGSYN-------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E + + A V + ++ +A Sbjct: 62 EAPNQSRRRSTVKALETFARTFGLRASRAVLGFPSETEQEIALLYDPSRIEAHHDPQSSA 121 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 A R V FS+ A+ +G + V+ +H KS + Sbjct: 122 RAPRFDEVFRFDIDVDATPEAIRFSKPPLELALRA----DGHPLRVIGVHAKSKAPHGAR 177 Query: 174 ENTY--SPSCSLLSQQAQ---WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF---- 224 QQ WL+ + ++ GDFN F Sbjct: 178 NPAEAVRIGIQNRRQQLAECVWLRRRVAGLLARHQSVMVMGDFNDGPGLDEYEKLFGRSG 237 Query: 225 ------------WKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAY 267 + +P+ + + +A + +D+ ++ + Sbjct: 238 IEIVLGLEEPPELRLHEPHARMALTQRVGIQPSSARFWLAPEQQYFEALLDFIMVSADLA 297 Query: 268 KFLIQESFSE-----ILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +++ SDH P+++D D Sbjct: 298 AKSPRWRIWHPLNDPNCFRTPELQQALLAASDHFPVTLDID 338 >gi|115360332|ref|YP_777469.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD] gi|115285660|gb|ABI91135.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD] Length = 269 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 50/286 (17%), Positives = 88/286 (30%), Gaps = 56/286 (19%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P A + +R+ ++NI K T + Q LDAD++ LQE+ Sbjct: 20 PPAAPGGRDLRIATYNIRG-----------GYGKWHTRAAHRIAQVIHELDADVIALQEV 68 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 P + +T + AV + ++ L Sbjct: 69 PLGGTH---APDVLAHLRDATGMHAVAGPTIDTPERRYGNAVLSRCPIRAARTLDL---- 121 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 SF + R A++ ++ + I V+ HL S S S Q Q L Sbjct: 122 -SFHQREPRGALDADIDSSAGMIRVVATHLGL-------------SASERSAQVQRL--- 164 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + +P ++ GD N + F + + RF + R Sbjct: 165 LAAFDTGAMPVILMGDIN---------EWFVRGRALRALVTRFRRAPAPRTFPTLYPVFS 215 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +D + ++L+ + R +R SDH P+ Sbjct: 216 --LDRIWIHPG--EWLVDVNVH--------RSMRARRASDHYPLVA 249 >gi|239994244|ref|ZP_04714768.1| exodeoxyribonuclease III [Alteromonas macleodii ATCC 27126] Length = 269 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 78/311 (25%), Gaps = 76/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++S+NIN + L+ DI+ LQE + + Sbjct: 1 MKVISFNING----------------IRARLHQLQAVIDAHQPDIIGLQEIKVHNEQFPV 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +++ H +A K + +G A Sbjct: 45 EAVEAMGYHVYFH------------GQKSHYGVAFLAKKEPLSVS----MGFPTDDEDAQ 88 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + G+ + VL+ F + + + L ++ Sbjct: 89 RRMIILKTTDDAGEPVTVLN-----GYFPQGENEKHETKYPAKRKFYKDLMTYLDDNHTP 143 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 ++ GD N L ++ T+ F Sbjct: 144 DDNVIVMGDVNISHTDLDIGIGEDNRKRWLKTGKCSFLPEEREWLNTVIDWGFEDSFRTL 203 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + + + L D ++ Sbjct: 204 NPETNDKFSWFDYRSKGFNDNRGLRIDLILATKPLHAKLHDAGI-------DYELRGIEK 256 Query: 292 LSDHCPISIDY 302 SDH PI +Y Sbjct: 257 PSDHAPIWAEY 267 >gi|238028045|ref|YP_002912276.1| exodeoxyribonuclease III xth [Burkholderia glumae BGR1] gi|237877239|gb|ACR29572.1| Exodeoxyribonuclease III xth [Burkholderia glumae BGR1] Length = 258 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 30/300 (10%), Positives = 78/300 (26%), Gaps = 68/300 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + + D++ LQE Sbjct: 1 MKIATWNVNSLN----------------VRKQHVLDWLASSQTDVLCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ ++ + ++ F A R Sbjct: 35 LKLPDEKFPKADLEAAGYRSWFTGQKTYNGVAILVRD-TLGVDETDVVKNIPGFEDAQQR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++ + + + + Y Q L+ W+ + Sbjct: 94 VIAATV-----NGVRIVSAYFPNGQAPGTDKFAYK------MQWLDALQAWLKDELARHP 142 Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249 + GD+N +D + P + + + Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAALLGMGLVDAFRRFEQPEKTFT 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ L D ++ SDH PI Sbjct: 203 WWDYRMLGFRRNAGLRIDHILLSPALATTLRACEV-------DREPRGWEQPSDHAPIFA 255 >gi|270262862|ref|ZP_06191133.1| endonuclease/exonuclease/phosphatase [Serratia odorifera 4Rx13] gi|270043546|gb|EFA16639.1| endonuclease/exonuclease/phosphatase [Serratia odorifera 4Rx13] Length = 298 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 85/287 (29%), Gaps = 51/287 (17%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 A K+R+ S+NI SD T + + K ++ D+V LQE+ Sbjct: 54 QAPKIRIASFNI---------------AAGKVSDMTAIAKAIKAMNVDVVALQEVDKLTG 98 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + + + + + +A K + YPL + Sbjct: 99 RSGKLDQAEELAKLTGM-HVAFGRAIDFDGGEYGLAFLSKYPLHDSKIYPLPSGQR---- 153 Query: 140 AGNRRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R A ++ I +++ HL ++ Q + L D + Sbjct: 154 -EQRIAFSAQTDVPEFPAPITLINTHL-----------DTKEDPAMRLDQVRELNDRTIE 201 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 + ++ GD N W + + I + I Sbjct: 202 IRGIK---LLFGDMNDVPGS-----VTWTELSRYWNDIMPT-----TQDGRSWPAENAEI 248 Query: 258 --DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 DY NA ++ +S + + D +SDH P+ + Sbjct: 249 KVDYIF-SGNAQRW-HLDSLTVPNASGDWNGIHWPAVSDHLPVVAEL 293 >gi|254518532|ref|ZP_05130588.1| endonuclease/exonuclease/phosphatase [Clostridium sp. 7_2_43FAA] gi|226912281|gb|EEH97482.1| endonuclease/exonuclease/phosphatase [Clostridium sp. 7_2_43FAA] Length = 265 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 44/291 (15%), Positives = 89/291 (30%), Gaps = 46/291 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+ T + R ++ N D DI+ +QE+ + Sbjct: 1 MKVMTFNLRTDFLLD-------INNRWNKRKEIVYDILNNNDCDIIGVQELNNKMFKDIS 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD-----SFS 138 + I S L I V KK+ + ++ L + + Sbjct: 54 KEAPGYNIIGSPRSLK-------YFIERNDILVSKKHKILEYSTFWLSEDPEKIGSAIWY 106 Query: 139 RAGNRRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT- 196 R L+ +N I V + HL + + +++ Sbjct: 107 SVYPRICTTALIRLNDGNIVRVYNTHLDFLLS------------KAREYGLKKIGEYMDK 154 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD----SRCNANKNLR 252 Q ++ P ++ GDFN + + +K+ S + K + Sbjct: 155 QHEKDNYPAILMGDFNASPTSKAIKNFSEGKYSSKKFIAVQDHKKEIYNMSTMSKFKGNK 214 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + IDY + + F + + GK SDH P+ D Sbjct: 215 KGLHIDYIFVTEE---------FKVLDTEILEYNKNGKYPSDHYPMIAKLD 256 >gi|332526767|ref|ZP_08402869.1| extracellular nuclease-like protein [Rubrivivax benzoatilyticus JA2] gi|332111170|gb|EGJ11202.1| extracellular nuclease-like protein [Rubrivivax benzoatilyticus JA2] Length = 931 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 48/347 (13%), Positives = 94/347 (27%), Gaps = 71/347 (20%) Query: 16 CTASVAQKVRLVSWNINTLSEQ----------------------EGVSLWKNSVKRTTSD 53 +V V++ S+N+ NS+ Sbjct: 467 APPAVGGNVKVASFNVLNYFTTFTNGATAGGQTGQGCSQGGTVSASNCRGANSLAEFQRQ 526 Query: 54 YTLLRQYAKNLDADIVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNND-I 110 + + LDAD+V L E+ + AV + + T + + +D I Sbjct: 527 RAKIVEALAALDADVVGLMEIQNNGVVAVQNLVDALNLRVGSGTYAALPEPAAGTGSDAI 586 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCF 169 A+ + + + A + +R + NG++ V+ HLKS Sbjct: 587 KVAMIYKPSRLTRVGAPASDTAAVN------SRPPLAQTFAPANGERFTVVVNHLKSKSS 640 Query: 170 LDSLENTYSP-----------SCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKIN 216 + + +P +L QA+ L+ ++ Q ++ GDFN Sbjct: 641 CPAAGDADAPGNVDSGDGQGCWNALRVAQAEQLRRFVAQLQAASGSHDVLLVGDFNAYAQ 700 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 P D+ + +D+ + + Sbjct: 701 EDPVFQFTGSGYVDE------PGRFDASGYSYVFDGAAGRLDHAISTATLSPKVSGARHW 754 Query: 277 EILYNEDDIKSRG--------------------KRLSDHCPISIDYD 303 I +E R SDH P+ + + Sbjct: 755 HINADESVAHDYNLEFKQPACAACAPDPYAATPYRSSDHDPVLVGLN 801 >gi|283458671|ref|YP_003363306.1| exonuclease III [Rothia mucilaginosa DY-18] gi|283134721|dbj|BAI65486.1| exonuclease III [Rothia mucilaginosa DY-18] Length = 291 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 42/319 (13%), Positives = 87/319 (27%), Gaps = 62/319 (19%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 F + +R+ S N+N + + + + D DI+ L Sbjct: 3 FSNTPAPRPSGLLRVASVNVNGIRAAYKKD---------------MAAWLASRDIDILCL 47 Query: 72 QEMGSYNAV-AKVFPKNTWCIFYSTERLINHSKRDSNNDI--HTAIAVRKKNVRVLQQSY 128 QE+ + +A+ ++ ++ W I ++ + ++A V + + + Sbjct: 48 QEVRAPDAIVRELLDESQWHILHAEAAAKGRAGVLVATRRTPNSAGEVLENQPVATRSNI 107 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 DS + NGK + V+ ++ S ++ + + Sbjct: 108 GEEYFDDSGRWVEADYVL-----PNGKTLTVVSAYVHSGEVGTQKQDDKYRFLERMLVRM 162 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPND 232 L +I GD N L + F + Sbjct: 163 PELAK-------HSDHVLIVGDLNVGHTELDIKNWKANQKRAGFLPEERAYFDRFFGDIG 215 Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + IDY + + + D Sbjct: 216 YRDVARELAGQVPGPYTWWSYRGKAFDNDAGWRIDYHMATPALAESAV-------EAVVD 268 Query: 284 DIKSRGKRLSDHCPISIDY 302 S +R SDH P+ +DY Sbjct: 269 RAASYDERFSDHAPLVVDY 287 >gi|37519709|ref|NP_923086.1| exodeoxyribonuclease III [Gloeobacter violaceus PCC 7421] gi|35210700|dbj|BAC88081.1| exodeoxyribonuclease III [Gloeobacter violaceus PCC 7421] Length = 258 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 28/302 (9%), Positives = 77/302 (25%), Gaps = 71/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + +WN+N+++ + + +++ LQE + Sbjct: 4 LTVATWNVNSIN----------------VRLGGVCAWLSAHRPEVLCLQETKVPDE---- 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + +A+ + + + D+ R Sbjct: 44 ------RFPVAAFEALGYEVAFAGQKAYNGVAIVSRKPVTVVRRGLPGDEADA-----PR 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + VE ++++++ + S + Y + L+ ++ + Sbjct: 93 RLIAATVEDT----QIINVYVPNGSEAGSEKFAYK------LLWLERLRQYLLADFDPKA 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNANK 249 ++ GDFN D I + Sbjct: 143 AVLLCGDFNIAPEERDVWDPKAVAGKVLFHPDEHAALERIRTWGFIDAFRLHSPAAGQFS 202 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + ID+ + + D SDH P++ Sbjct: 203 WWDYRAAAFRRNLGMRIDHIWVSSPLAERCSACWI-------DAQPRAQPSPSDHVPVAA 255 Query: 301 DY 302 + Sbjct: 256 SF 257 >gi|237709161|ref|ZP_04539642.1| metallophosphoesterase [Bacteroides sp. 9_1_42FAA] gi|229456857|gb|EEO62578.1| metallophosphoesterase [Bacteroides sp. 9_1_42FAA] Length = 276 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 81/309 (26%), Gaps = 71/309 (22%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K + L L +A +RL+++NI + + V D+ + Sbjct: 30 MKKTLPLLFILLFALSAQSQNSLRLMTYNIKNANGMDDVC-----------DFQRIADVI 78 Query: 62 KNLDADIVFLQEMGSYN-------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 ++ ++V LQE+ S + ++ + +++ + I Sbjct: 79 NHIHPEVVALQELDSMTHRSGQKYVLGEIAGRTQMHAYFAP--------AIDYDGGKYGI 130 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + K + V ++ L G R R + + + Sbjct: 131 GLLTKEIPVSLKTMTLPG------REEARALIMAEFDN-------YIYCCTHLSLTEEDR 177 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 L+ PF +AGD N + Sbjct: 178 -------------MASLELIKDFAAAHKKPFFLAGDLNAEPESAFIKYL----------Q 214 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 F D + IDY + K S + SD Sbjct: 215 QDFQILSDVNQHTFPAPAPTETIDYITALKQNMKGFTVTSAQVVNEPV---------ASD 265 Query: 295 HCPISIDYD 303 H P+ I + Sbjct: 266 HRPLVIVLE 274 >gi|225852859|ref|YP_002733092.1| endonuclease/exonuclease/phosphatase [Brucella melitensis ATCC 23457] gi|256263656|ref|ZP_05466188.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 2 str. 63/9] gi|225641224|gb|ACO01138.1| Endonuclease/exonuclease/phosphatase [Brucella melitensis ATCC 23457] gi|263093710|gb|EEZ17715.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 2 str. 63/9] gi|326409399|gb|ADZ66464.1| endonuclease/exonuclease/phosphatase [Brucella melitensis M28] Length = 369 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 44/366 (12%), Positives = 98/366 (26%), Gaps = 86/366 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKN----------------SVKRTTSDYTLLRQY------- 60 + ++N+ L + S ++N + R + Sbjct: 2 FTIATFNVENLMRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMT 61 Query: 61 ---AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 ADI+ LQE+ + A+ + + R + + I A+ +R Sbjct: 62 ALAIAETRADILCLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121 Query: 118 ------KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKI 157 + S+ L D R R + + + I G+ + Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 181 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNR 213 + HLKS + ++ + S + +A+ ++ I +K + ++I GDFN Sbjct: 182 SLFVAHLKSMSGARNGQDGRASSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 241 Query: 214 KINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP 256 + + ++ + Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301 Query: 257 ----IDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 +DY + + + + + SDHCP Sbjct: 302 HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHCP 361 Query: 298 ISIDYD 303 +S+ + Sbjct: 362 VSVTLN 367 >gi|323136205|ref|ZP_08071287.1| exodeoxyribonuclease III Xth [Methylocystis sp. ATCC 49242] gi|322398279|gb|EFY00799.1| exodeoxyribonuclease III Xth [Methylocystis sp. ATCC 49242] Length = 266 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 36/306 (11%), Positives = 83/306 (27%), Gaps = 67/306 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN L+ + K D++ LQE +A Sbjct: 1 MKITTWNIN----------------SVRLRMPLVAHFLKTRAPDVLCLQETKCRDAE--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + +AV K + D+ Sbjct: 42 FPMKDFHAL------GYRHVAINGQKGYHGVAVVSKKPLRFVEKRDFCEKGDARH----- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +E I + + ++ + D + +P + +K WI + + Sbjct: 91 --IAVEIEAKSGPIMLHNFYVPAG--GDEPDVEINPKFAHKLDFLDEMKSWIETEGVTKG 146 Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKT--------------IDPNDSLIRFPKEKDSRCNA 247 + GD N + + ++ K + + Sbjct: 147 RVALVGDLNIAPLEHDVWSHKALLKVVSHTPVEVEKLTDVFRAGRWIDAMRHFVPADEKL 206 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ ++ + L + +R SDH P Sbjct: 207 YTWWSYRAADWAASNRGRRLDHILVSEALGGALS-------RLDVLQEARGWERPSDHVP 259 Query: 298 ISIDYD 303 ++I+ Sbjct: 260 VTIELS 265 >gi|301091754|ref|XP_002896054.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262095616|gb|EEY53668.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 891 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 92/320 (28%), Gaps = 51/320 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 V + ++N+ + + + K T + + DI L E Y A + Sbjct: 582 VSVGTYNVWMMPRKVSAFTSCSPKKNTRARL--IGDLLPPC--DIWVLTECFDYRARDIL 637 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHT---AIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K T ++ + H + + +N + + K + + GA + Sbjct: 638 LDKMTEAGYFFFSPTVGHKRINKSNMRKLLNGGVLLASKYPILSVRVKLFEGACAGADKL 697 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 ++ + + +G + V HL+++ S ++ Q + +++ Sbjct: 698 ADKGVLYCKILKDGLLVHVFSTHLQAW--------NDPLSRTMRKLQMDMIANFMRAMDI 749 Query: 201 S--LVPFVIAGDFNRKINYLG---NNDDFWKTIDPNDS---------------------- 233 + GD N + D+ + D Sbjct: 750 DEVNDVVLFVGDLNVDYHLNKTNQEYDEMLNIFEAKDPSAVHPRKLGNASDSDKKESAAE 809 Query: 234 ------LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 P+ + + +DY + + + S+ + L Sbjct: 810 FKHLRKYSFDPRVNALAADGLSTDGSLELLDYILYSRTHRQPTTASSWVQPLTTSQPWMW 869 Query: 288 RG---KRLSDHCPISIDYDF 304 R LSDH P+ ++ F Sbjct: 870 RNQPQYNLSDHFPVVSEFTF 889 >gi|260173205|ref|ZP_05759617.1| hypothetical protein BacD2_15145 [Bacteroides sp. D2] gi|315921479|ref|ZP_07917719.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695354|gb|EFS32189.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 608 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 81/304 (26%), Gaps = 63/304 (20%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K L + L +RL+++NI + + + ++ + Sbjct: 1 MKKIFLLISVILFIFPVQAQHTLRLMTYNIKNANGMDDIC-----------NFQRVANVI 49 Query: 62 KNLDADIVFLQEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N D+V +QE+ S + V + + I + Sbjct: 50 NNASPDVVAIQEVDSMTRRSGQKYVLGEIAERTQMHACFAPAIK----FDGGKYGIGLLT 105 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K V + Q+ PL G R R + E HL Sbjct: 106 KQVPLRLQAIPLPG------REEARILILAEFE----DYIYCCTHLSLTEED-------- 147 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + L+ + P +AGD N + + F Sbjct: 148 --------RMKSLEIVKSFTASYKKPLFLAGDMNAEPESDFIK----------ELQKDFQ 189 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + K IDY ++ S + SDH PI Sbjct: 190 ILSNPKQSTYPAPDPKETIDYITALKSNANGFALISSQVL---------DEPMASDHRPI 240 Query: 299 SIDY 302 ++ Sbjct: 241 LVEL 244 >gi|311113023|ref|YP_003984245.1| exodeoxyribonuclease III [Rothia dentocariosa ATCC 17931] gi|310944517|gb|ADP40811.1| exodeoxyribonuclease III [Rothia dentocariosa ATCC 17931] Length = 282 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 85/314 (27%), Gaps = 64/314 (20%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN- 78 A+ +R+ S N+N + + + + D DI+ LQE+ + + Sbjct: 4 AAKTLRVASVNVNGIRA---------------AYRKDMATWLAGRDVDILCLQEVRAPDK 48 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVLQQSYPLLGAKD 135 V ++ ++ W I ++ + H ++ + + D Sbjct: 49 IVRELLNEDDWNILHAEAAAKGRAGVLVATRKHPNANGELLK-NQPVATRSTIGEDYFAD 107 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + + G+ + V+ ++ S ++ + + L Sbjct: 108 AGRWVEADYTL-----PTGETLTVVSAYVHSGEVGTPRQDDKYRFLDRMLVRLPELAQ-- 160 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPK 239 +I GD N L + F K K Sbjct: 161 -----HSDHVLIVGDLNVGHTELDIKNWKANQKRAGFLPEERAYFDKFFGEIGYEDVARK 215 Query: 240 EKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + IDY + ++ + D S + Sbjct: 216 LAGEVPGPYTWWSYRGKAFDNDAGWRIDYHMATPALAAKAVEATV-------DRAASYDE 268 Query: 291 RLSDHCPISIDYDF 304 R SDH P+ +DY F Sbjct: 269 RFSDHAPLVVDYQF 282 >gi|254000148|ref|YP_003052211.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. SIP3-4] gi|253986827|gb|ACT51684.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. SIP3-4] Length = 250 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 84/287 (29%), Gaps = 48/287 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+ ++NI+ L + R+ +NL AD+VFLQE+ + Sbjct: 4 TLRVATFNIHKGLTSFNARLALHDQ----------REMIRNLQADVVFLQEVQDEHHGNG 53 Query: 83 V------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + T + + + K H AV + + ++ + Sbjct: 54 LRFKHWPAAGQTHFLADACGPNYAYGKNAVYPGGHHGNAVLSRFPILQSTTHDISA---- 109 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R + + I G + I + +Q L+D+I Sbjct: 110 -HEIEQRGLLHCEIAIEGWPQTLHCICVHLGLL-----------ARWRFKQFGALRDYIH 157 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 P VIAGDFN G+ + +D + F + ++ Sbjct: 158 AVIPEDAPLVIAGDFNDWRLSAGH-----QVMDGLNMREVFEHAHGKPARSFPSMFPLFR 212 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D + F+ + SDH +S + Sbjct: 213 LDRIYVRG----------FNIHSAHVHGGPRTALT-SDHAALSAVLE 248 >gi|74318453|ref|YP_316193.1| exodeoxyribonuclease III [Thiobacillus denitrificans ATCC 25259] gi|74057948|gb|AAZ98388.1| exodeoxyribonuclease III xth [Thiobacillus denitrificans ATCC 25259] Length = 255 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 79/303 (26%), Gaps = 74/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L L + D+V LQE + Sbjct: 1 MKIAAWNVNSL----------------KVRLPQLLDFLATRRPDVVCLQETKVPDDA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S + +A+ + + + Sbjct: 42 -------FPSVELSAAGYRAVFSGQKTYNGVAILSR------SQATDVSVGIPGFGDEQK 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + VE V+ ++ + DS + Y + L W+ ++ Sbjct: 89 RVIAATVEGT----RVVCVYCPNGQSPDSDKYFYKLA------WFDALSLWLMEELARHP 138 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 + GDFN +D ++ + L + + + Sbjct: 139 RLAVLGDFNIAPEDRDVHDPKAWEGSVHVSPRERERFQALLQLG-LKDSFRLFEQPEKSF 197 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ++ ID+ ++ + D + +R SDH P+ Sbjct: 198 SWWDYRMMGFRRNHGLRIDHILLTDALAASCTSSTI-------DRDMRKLERPSDHAPVL 250 Query: 300 IDY 302 + Sbjct: 251 AEI 253 >gi|325108266|ref|YP_004269334.1| endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM 5305] gi|324968534|gb|ADY59312.1| Endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM 5305] Length = 320 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 90/311 (28%), Gaps = 51/311 (16%) Query: 22 QKVRLVSWNINT----LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 ++ + WN+ + + V + ++L+ADI+ L E+ + Sbjct: 31 NQITVAFWNVQNLLDEFDDPDLPHDEAFPVNSVRERMGKDAEVIRHLNADILGLAEVENR 90 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + ++ + S E + + + +A+ + Q Sbjct: 91 ALLNRLVKG-----YLSNEGYKHVVLIEGEDSRGIDVALLSRFPCFAQS---------VD 136 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R + + G+ +V+ H KS + + + Q +++ + + Sbjct: 137 IEGLPRDLLACRFSMRGQVFYVVVNHWKSRRDGGGGDVRLNGG---RAMQ-EFVSRTVRE 192 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP 256 + VP + GDFN + D + + + R+ Sbjct: 193 YEGQAVPVIAMGDFNDEP-----EDASFAPMRQAGMVSTMDSLAQEDRWTLGYYDRDASR 247 Query: 257 -----IDYFVMDQNAYK-----FLIQESFSEILYNEDDIKSRGKRL-------------S 293 D + N + ++ E D + G R+ S Sbjct: 248 MDLLCFDQIWITPNLQQSPGMRWVRTEVVRPRFMINDRRQFNGVRIPLPIDDYRDRIGYS 307 Query: 294 DHCPISIDYDF 304 DH P+ + F Sbjct: 308 DHYPVKATFAF 318 >gi|262404202|ref|ZP_06080757.1| exodeoxyribonuclease III [Vibrio sp. RC586] gi|262349234|gb|EEY98372.1| exodeoxyribonuclease III [Vibrio sp. RC586] Length = 268 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 82/309 (26%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDDA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K V + G R Sbjct: 42 -------FPRQEVEAMGYQVYFHGQKAHYGVAILCKQTPVEV----IKGFPTDSEEHQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + V+ +G K +L+ F + Q + L ++ + + + Sbjct: 91 MIMATFVDQDGNKTTILN-----GYFPQGDNVEHETKFPYKRQFYRDLMTYLGEHRSNAE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 V+ GD N ++ ++ +++ + F + Sbjct: 146 RLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSFQPEEREWLQSLMDWGLVDTFRQLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + + D + S Sbjct: 206 EVSDQFSWFDYRSRGFDDNRGLRIDVILATPTLAETCQEAGI-------DYELRGIDKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWATF 267 >gi|145594280|ref|YP_001158577.1| exodeoxyribonuclease III Xth [Salinispora tropica CNB-440] gi|145303617|gb|ABP54199.1| Exodeoxyribonuclease III [Salinispora tropica CNB-440] Length = 265 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 74/302 (24%), Gaps = 71/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N + L + + D+V LQE + Sbjct: 1 MRLATWNVN----------------SVKARLPRLLDWLAGTNPDVVCLQETKCPDGA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ ++ +A+ + + F R Sbjct: 42 -------FPVAEVGTLGYTVASHSDGRWNGVAILSRVGLTDVTVG--FPDEPGFPDPEAR 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + LD Y + L+D + + Sbjct: 93 A-----LSATCAGLRVWSVYVPNGRTLDDPHYAYKLA------WLGALRDTLEVELTGGA 141 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GDFN D + P + Sbjct: 142 PLAVCGDFNVAPTDSDVWDPALFTGSTHVTPAERTALAALRDLGLDDVVPTPMKGP-HPF 200 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID + D +GK SDH PI Sbjct: 201 TYWDYRAGMFHQNKGMRIDLVYASAPFAR-------VVRAAYVDREARKGKGPSDHAPIV 253 Query: 300 ID 301 +D Sbjct: 254 VD 255 >gi|258651796|ref|YP_003200952.1| endonuclease/exonuclease/phosphatase [Nakamurella multipartita DSM 44233] gi|258555021|gb|ACV77963.1| Endonuclease/exonuclease/phosphatase [Nakamurella multipartita DSM 44233] Length = 942 Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 48/330 (14%), Positives = 87/330 (26%), Gaps = 48/330 (14%) Query: 16 CTASVAQKVRLVSWNINTLS---------------EQEGVSLWKNSVKRTTSDYTLLRQY 60 +V R+ S N+ + ++ T + Sbjct: 458 SPPAVGGSTRVASQNVLNYFLTVDDGTTAGRICGPARNQECRGADNADELARQRTKILAA 517 Query: 61 AKNLDADIVFLQEMGSYNAVA---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 LDAD+V L E+ + V + ++ + + I + R Sbjct: 518 LGGLDADVVGLLELENTPGVDPAADLVAGLNARPGAQPYASVD-TGVIGGDAIRVGLLYR 576 Query: 118 KKNVRVLQQSYPLLGAKDS-FSRAGNRRAVELLVE-INGKKIWVLDIHLKSF---CFLDS 172 V+ + L KD F NR + + G + V HLKS C D Sbjct: 577 PSAVQPVGGFQILDSTKDQAFIDTANRPVLVQTFQTAAGGRFTVAVAHLKSKGSACAGDP 636 Query: 173 LENTYSPSC-SLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 +C + A L ++ +I GD N + +T+ Sbjct: 637 DAGDGQGNCNQTRTAAAAALARYLDTDPTGSGDPDRLIVGDLNSYDHEDPI-----RTLR 691 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + +D+ + + + I +E D+ Sbjct: 692 EAGYTDQIAATGGEFAYGYVFDGQAGYLDHALASASLTGQVTAAGEWHINADEPDVLDYD 751 Query: 290 ----------------KRLSDHCPISIDYD 303 R SDH P+ + D Sbjct: 752 TTFKSPEQDALFEANQFRASDHDPVLVGID 781 >gi|15889021|ref|NP_354702.1| exonuclease III [Agrobacterium tumefaciens str. C58] gi|15156812|gb|AAK87487.1| exonuclease III [Agrobacterium tumefaciens str. C58] Length = 265 Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 89/305 (29%), Gaps = 68/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + L Q+ K+ DIV LQE+ S V + Sbjct: 1 MKIATWNING----------------VKARIENLCQWLKDSSPDIVCLQEIKS---VDEG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + +A+ K D +R Sbjct: 42 FPRLE-------IEALGYHIETHGQKGFNGVALLSKVKPDEVNRGLPGDDADEQARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + + G I V ++L + D + L+ + + Sbjct: 92 --IEGVFSVEGGAIRVCSLYLPNGNPPDDPVK-----YPYKLAWMERLRRFAEDRLAMEE 144 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++AGD+N +L ++ ++ N + Sbjct: 145 PLILAGDYNVIPEPFDCHDPRVWEGDALFLPKTRAAFRKLE-NLGFTDAARATTDAAGLY 203 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ A L + + ++ SDH P+ Sbjct: 204 SFWDYQAGAWPKNNGIRIDHLMLSAEAADRLQSVEIEKHV-------RAWEKPSDHVPVC 256 Query: 300 IDYDF 304 +DF Sbjct: 257 GYFDF 261 >gi|56479395|ref|YP_160984.1| hypothetical protein ebA6951 [Aromatoleum aromaticum EbN1] gi|56315438|emb|CAI10083.1| conserved hypothetical protein,predicted Endonuclease / exonuclease / phosphatase family [Aromatoleum aromaticum EbN1] Length = 271 Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 34/280 (12%), Positives = 82/280 (29%), Gaps = 52/280 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + +R+ ++NI+ + D + + + L+ D + LQE+ + Sbjct: 20 SDCLRISTYNIHRCVGADR-----------REDASRVARVIAELNCDTIGLQEVDNQPDR 68 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + ++ I ++ A+ + + + + L SF+R Sbjct: 69 RHDSMQLDFLAHAASMTAI-PGHTIVRHEGVFGNALLTRRPVLGVRQHDL-----SFNRR 122 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R A+E+ +++ G+ + V+ HL + Q + + + Sbjct: 123 EPRGALEVDLDVEGEVVRVIVTHLGLRP-------------AERRFQVRKMLKLL-HDLP 168 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 V+ GD N + + + +D Sbjct: 169 MDQLVVVLGDINEWLPLGRPLRWLHGIL-----------GHAPGERSFPVWLPMFALDRV 217 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +L E ++ SDH P+ Sbjct: 218 WVRPR----------HNLLAFETHRSPTSRKASDHLPVKA 247 >gi|304316058|ref|YP_003851203.1| endonuclease/exonuclease/phosphatase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777560|gb|ADL68119.1| Endonuclease/exonuclease/phosphatase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 232 Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 84/278 (30%), Gaps = 56/278 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + ++++NI+ + + + + K AD++ LQE+ +Y + Sbjct: 3 LTIMTYNIHGGKDIDDNLTIYG-----------ISNFIKQSKADVIGLQEVDTYLGRSYF 51 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + V + +Y L R Sbjct: 52 LNEIKYLAKRLKMYYAFGPNIKIGLGSF-GNGILSRYPIVKKNNYHLTSTG------ERR 104 Query: 144 RAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + +L+E++ +KIW L HL Q+Q + I + Sbjct: 105 GVLSVLIELDSYRKIWFLTTHLGLNS-------------KERVIQSQEILKIIKRL---D 148 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 P ++ GDFN + +S + + + IDY + Sbjct: 149 YPVILTGDFNETP-ENEAYSIINHVLVDGAF------SANSDYYSYLDGDEPVRIDYIMH 201 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ + + IK+ LSDH P+ Sbjct: 202 SKDI--------------SVESIKAVDCNLSDHFPVIA 225 >gi|34497748|ref|NP_901963.1| hypothetical protein CV_2293 [Chromobacterium violaceum ATCC 12472] gi|34103604|gb|AAQ59965.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 407 Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 85/288 (29%), Gaps = 50/288 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + + + ++NI+ S + + L D++FLQE+ N + Sbjct: 159 KSISICTYNIH----------KGMSPLNRHVKVGGMAEALAELAPDMLFLQEVQGKN-LE 207 Query: 82 KVFPKNTWCIFYSTERLIN-------HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + W + L + S H A+ + Sbjct: 208 RALRHQIWPVQPQHHYLAGRLAHRAVYGLNASYGHGHHGNALLTRFPV-----NDWCNRD 262 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 S +R +R ++ L++ +G V+ + +Q + L D+ Sbjct: 263 ISVNRFESRGVLQCLLQPDGWPQPVVALCGHFNLLAFD-----------RRKQYRGLADY 311 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + Q +P ++AGDFN + + ++ + + Sbjct: 312 VRQAIADHLPLILAGDFNDWRGEAS--ALLRQELGLEEAFLTLHGRHAQ---SFPARMPM 366 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + L ES + LSDH P+ + Sbjct: 367 LALDRIYVRG-----LKVESARVLS------GRPWSGLSDHLPLCAEI 403 >gi|89093141|ref|ZP_01166091.1| Exonuclease III [Oceanospirillum sp. MED92] gi|89082437|gb|EAR61659.1| Exonuclease III [Oceanospirillum sp. MED92] Length = 271 Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 77/312 (24%), Gaps = 74/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+ +N+N L S L+ D++ LQE + Sbjct: 1 MKLICFNVNGL----------------RSRLHQLQAVIDKYQPDVIGLQE---TKVHDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + H + + K Q L +D A R Sbjct: 42 FP-------LTDVEAMGYHVEIHGQKGHYGVCLISKKPLTNVQKGYLTDEED----AQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +G + V++ F + + L+ + + + Sbjct: 91 MIMGDYETDSGNTVRVMN-----GYFPQGESVDHEVKFPAKRKFYADLQAHLEEHCSADQ 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 V+ GD N ++ +++ + F Sbjct: 146 NIVVMGDLNISPEDKDIGIGEPNRKRWLKTGKASFQPEEREWYAKLTGWGLTDSFRHLNP 205 Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + ID ++ + D ++ Sbjct: 206 DEDQVFSWFDYRSRGFEAEPRRGLRIDGILLTAPLLEKCADAGV-------DYELRGMEK 258 Query: 292 LSDHCPISIDYD 303 SDH PI + D Sbjct: 259 PSDHAPIWTELD 270 >gi|310643609|ref|YP_003948367.1| exodeoxyribonuclease iii xth [Paenibacillus polymyxa SC2] gi|309248559|gb|ADO58126.1| Exodeoxyribonuclease III Xth [Paenibacillus polymyxa SC2] Length = 254 Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 79/303 (26%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + Y K DADI +QE + Sbjct: 1 MKLISWNVNGLRACVTKGFYT---------------YLKETDADIFCVQETKLQEGQILM 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S I + + + R Sbjct: 46 ENMEEYAQYWNYAEKKGYSGTAIFTKI---------------KPLSVHYGLEENEEPEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +K ++++++ + S Q L ++ Sbjct: 91 -----TITLEFEKFYLVNVYTPNTKRDLSRLPYRLEWEDRFRSYLQQL--------DAQK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P +I GD N D + + F R + Sbjct: 138 PVIICGDLNVAHQEIDLKNAKANYGNAGFTPEERDRMSQLLNAGFIDTFRYFYPDRTDVY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ + L+ S + SDHCP+ Sbjct: 198 SWWSYMPKVRERNIGWRIDYFLVSERLRPLLMDASIDCHIT-----------GSDHCPVI 246 Query: 300 IDY 302 +D Sbjct: 247 LDL 249 >gi|319944727|ref|ZP_08018991.1| endonuclease/exonuclease/phosphatase [Lautropia mirabilis ATCC 51599] gi|319741976|gb|EFV94399.1| endonuclease/exonuclease/phosphatase [Lautropia mirabilis ATCC 51599] Length = 253 Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 47/290 (16%), Positives = 87/290 (30%), Gaps = 56/290 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +R+ ++NI+ + R +RQ L AD+VFLQE+ + Sbjct: 6 LRVATYNIH-------KGVVPGPSLRRRPMVKEMRQRLHELQADVVFLQEVQGQNNRFAK 58 Query: 82 KVF--PKNTWCIFYSTERLINHSKRDSNN------DIHTAIAVRKKNVRVLQQSYPLLGA 133 + P + + + + + + H A+ + + + Sbjct: 59 RFAQWPADPQAQYLALDPESSRRFQAVYGLNARYLHGHHGNALLSQFPILSIE-----NR 113 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 S R + ++++ + + IH F ++QA L D Sbjct: 114 DFSDHVFERRGVLHCVLQMGERAVHCFVIHFGLF-------------ARSRARQAGALID 160 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 WI + P +IAGDFN D + + + L Sbjct: 161 WIRAEVPPGAPLLIAGDFNDW------QDALSRLLVERLGVYEV----LDSARTFPALMP 210 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +D + F+ S RLSDH P+ D Sbjct: 211 CLRMDRIYVRG----------FAVETAQVLRGLS-WARLSDHAPVVADLT 249 >gi|16125115|ref|NP_419679.1| hypothetical protein CC_0862 [Caulobacter crescentus CB15] gi|221233842|ref|YP_002516278.1| hypothetical protein CCNA_00905 [Caulobacter crescentus NA1000] gi|13422121|gb|AAK22847.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220963014|gb|ACL94370.1| hypothetical protein CCNA_00905 [Caulobacter crescentus NA1000] Length = 305 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 88/311 (28%), Gaps = 48/311 (15%) Query: 5 YVLALVFFLVPCTASVAQK----VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 + A++ L+P T S A + + ++S+NI + + + + Sbjct: 20 ILAAVLASLLPVTGSQAGEPGRALWVMSYNIRYDNPDDRPDWRTRRGP--------MVEQ 71 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + DI+ LQE A+ + + + + + T ++ Sbjct: 72 IRFFAPDILGLQE-----ALPAMVDQLAGDLAGYAHYGVGRDDGARLGETTTIFYRAERF 126 Query: 121 VRVLQQSYPLLGAKDS----FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 RVL ++Y D+ + A R L+++ + + Sbjct: 127 QRVLARTYWCSPTPDTPSKAYDAALPRTFTRLVLKDRITGVTFDVRNAHLDHVG------ 180 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + S + + Q L W + GDFN P Sbjct: 181 -AESRAKCAAQILALAPW------PKARLITLGDFNSAPEEAP-YRLLTAPEGPYRDARA 232 Query: 237 FPKEKDSRCNANKNLRNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 S N PIDY +D+ + + + + Sbjct: 233 AASSVFSPSTGTFNRFTPASIGPPIDYIFVDRRL---------NVARFAVPTDVADAGVI 283 Query: 293 SDHCPISIDYD 303 SDH P+ + Sbjct: 284 SDHFPVLAEIT 294 >gi|302879657|ref|YP_003848221.1| Endonuclease/exonuclease/phosphatase [Gallionella capsiferriformans ES-2] gi|302582446|gb|ADL56457.1| Endonuclease/exonuclease/phosphatase [Gallionella capsiferriformans ES-2] Length = 249 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 79/288 (27%), Gaps = 51/288 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 Q + + ++NI+ LR+ L+ADIVFLQE+ + Sbjct: 2 QTLTVATYNIHKGFSHFNG----------RVVMHELRERLHELNADIVFLQEVQGEHTGH 51 Query: 82 KVFPKNTWCIFYST------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 N + + K H A+ + V L Sbjct: 52 AGRFANYPDGAHHEFIADRRWPHSAYGKNCVYEAGHHGNAILSRYPIVQT-----LNTDI 106 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 S R +R + + + + + + F Q + L +++ Sbjct: 107 SAHRFESRGLLHCEIALPDGQ-RLHSLCAHFGLF-----------ARGRRAQTRALIEYV 154 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-CNANKNLRNK 254 + V +IAGDFN + I + + R + Sbjct: 155 QHEIPPDVQVIIAGDFNDW------RNQMGAVIASELGMHDVFQLHGGRVARSFPARLPL 208 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D M F+ + +RLSDH IS Sbjct: 209 FRLDRIYMRG----------FTVAQAEVHAGGA-WQRLSDHAAISATL 245 >gi|193212906|ref|YP_001998859.1| endonuclease/exonuclease/phosphatase [Chlorobaculum parvum NCIB 8327] gi|193086383|gb|ACF11659.1| Endonuclease/exonuclease/phosphatase [Chlorobaculum parvum NCIB 8327] Length = 341 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 41/319 (12%), Positives = 82/319 (25%), Gaps = 53/319 (16%) Query: 26 LVSWNINTLSE-------QEGVSLWKNSVKRTTSDYT----LLRQYAKNLD--------A 66 ++ WN+ L + + S T + Q + ++ Sbjct: 32 IMWWNVENLFDTKNDKQVDDREFTPGGSRHWTPKKLLLKQLRIAQVFRAIEQQREYERYP 91 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 DIV E + + I++ + I +A L+ Sbjct: 92 DIVAFAETENRGVFEGTL-----QAIDHAQYKIDYHESPDPRGIDIGLAWN---PATLKF 143 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 + + G R + +G V+ H S F + + + Sbjct: 144 TGSKPCRVTLDNGRGTRYVIVAGFMASGHPFSVVLNHWPSRSFDAKWSEPKRIAAAKV-- 201 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND------SLIRFPKE 240 A+ + D +T + ++ GDFN N + D + L+ Sbjct: 202 -ARHIVDSLTTRNPMAE-IIVMGDFNDHPNDRSIRTVLGSSFDRKEVTSSANRLLYNCWN 259 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYK----FLIQESFSEIL------------YNEDD 284 + ID ++ + +SF Y+ Sbjct: 260 DTKSPGTYYYRKQWERIDQILVSPALLDNSKLSIDTKSFRVFSIPEMFSHPGKTLYSTYQ 319 Query: 285 IKSRGKRLSDHCPISIDYD 303 SDH P+ + D Sbjct: 320 RGKFKGGYSDHLPLLLKID 338 >gi|146343957|ref|YP_001201813.1| putative exported DNAse, extended at the C-terminus relative to other homologues [Pseudomonas fluorescens SBW25] gi|146187769|emb|CAM96097.1| putative exported DNAse, extended at the C-terminus relative to other homologues [Pseudomonas fluorescens SBW25] Length = 376 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 88/309 (28%), Gaps = 44/309 (14%) Query: 1 MIRKYVLALVFFLVPCTA--SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 M + +++ + L + +VA R+ +WN L + Y L Sbjct: 1 MKKTLLMSALLVLATAISGVAVAADARVGTWNTMRLGNGD------------QKSYPALA 48 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + D++ +QE+ + + + L + + R Sbjct: 49 AV--AANVDVLAVQEVMNDEGIQYLKLALEQRTREKWSSLCSSPVGSRSYKEQYCFLSRD 106 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENT 176 V+ + L K F R + +G + +H+ Sbjct: 107 SAVQYEDGAVSFLDRKHVFM----REPYSARFKSLSDGNTFALATVHIIYG--------- 153 Query: 177 YSPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 S + + + + L ++ ++ P ++ GDFN + + I Sbjct: 154 --KSAADRTPELKELGNYWEWLEQVYPGEPIMLMGDFNMPPSDPAFESLRARAI------ 205 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-S 293 + +N + R D +Q+A + G+R S Sbjct: 206 PMVTDG--ASTLSNTSGRFANLYDNVFANQSARSMMSGVGIVNYPAMLKVSHEDGRRAVS 263 Query: 294 DHCPISIDY 302 DH P+ Sbjct: 264 DHAPVFFQL 272 >gi|301104252|ref|XP_002901211.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262101145|gb|EEY59197.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 374 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 86/314 (27%), Gaps = 35/314 (11%) Query: 19 SVAQKVRLVSWNINTLS----EQEGVSLWKNSVKRTTSDYT----LLRQYAKNLDADIVF 70 + ++++ ++N L + +T +D + K LDADI+ Sbjct: 65 TSTSQLKVTTFNTEFLFLGNAPHGLKCPGADCRWKTVADAQSHVIQIASVIKKLDADIIQ 124 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 L E+ + V + + ST + D++ ++A+ R V Q Sbjct: 125 LNEVEDCTVLQAVIAQL-QALGDSTYKPYVVRGADTSTGQNSALLTRID-PVVDVQRTET 182 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWV------LDIHLKSFCFLDSLENTYSPSCSLL 184 + + K + L P C Sbjct: 183 RATIPVSGSKCPSSSGYSSSKGVTKHFYTTFNVTGFSKPLTLVGAHLLANPESKPRCFER 242 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNR------KINYLGNNDDFWKTIDPNDSLIRFP 238 QA L + +I GD N N + ++ + Sbjct: 243 EAQATVLAGLANAAVDEGHHAIITGDLNDWSATVLDKNSNTPISAVLSILTGSNFVDVAS 302 Query: 239 KEKDSRCNANKN---------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 K S +D+ ++ ++ L SF+ LY Sbjct: 303 KISQSDRYTQWWDEDNNCVFEDSEVSSLDHMLVSKSLSSALKSVSFNHDLYASSCSGYN- 361 Query: 290 KRLSDHCPISIDYD 303 SDH PIS+ + Sbjct: 362 ---SDHYPISVVLN 372 >gi|154507728|ref|ZP_02043370.1| hypothetical protein ACTODO_00210 [Actinomyces odontolyticus ATCC 17982] gi|153797362|gb|EDN79782.1| hypothetical protein ACTODO_00210 [Actinomyces odontolyticus ATCC 17982] Length = 275 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 33/306 (10%), Positives = 81/306 (26%), Gaps = 58/306 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + + + N+N + + + + D D++ +QE+ + +++ Sbjct: 2 TLTVTTVNLNGIRA---------------AHKRGFLDWLEASDTDVLLMQEVRAPEEISR 46 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 W + R+ + +AVR+ + + +L ++ +G Sbjct: 47 EIMGEAWESVWVPCRIKGRAGI--------GVAVRRGRAVLEGEPRLILDEAETDVDSGR 98 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + E + V+ + S + + + L I ++ Sbjct: 99 WLEAVVRPEGGDTPVRVVSAYFHSGEKDTPKQEAKMAHLPRIGARMAEL---IAEEAAGG 155 Query: 203 VPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCN 246 + ++ GDFN + + F Sbjct: 156 ISSLVCGDFNVVRSEADIKNWKPNHNKRAGVLDEEIAFLNRWVEEGWRDTVRDLAGDVQG 215 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDY + + +R SDH P Sbjct: 216 PYSWWSWRGQAFVNNAGWRIDYQYATPALGERARS-------FEIGRADEYAERFSDHAP 268 Query: 298 ISIDYD 303 +S+ Y+ Sbjct: 269 VSVTYE 274 >gi|158521790|ref|YP_001529660.1| endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans Hxd3] gi|158510616|gb|ABW67583.1| Endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans Hxd3] Length = 261 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 40/290 (13%), Positives = 72/290 (24%), Gaps = 40/290 (13%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 +V ++S N+ G W+N + K D + +QE+ + Sbjct: 5 PQSTGRVSVMSLNVRFGLADAGEHSWENRKP-------AFVELFKQYRPDFIGMQEVNGF 57 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A + S I I K + L D Sbjct: 58 QAA-------FFAGLLSDYHAIGKRTPAPAGWQDVLIFYHKNWECRDCDRFFLSDTPDIP 110 Query: 138 SRAG----NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 SR R+ V E G ++ ++ H + A L Sbjct: 111 SRMPDSRWPRQCVMGTFEKEGLRMVCVNTHFDFDEPVQVKS-------------AAILLA 157 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 + + + +P +I GDFN + F + + Sbjct: 158 RLEKFSNTALPVLITGDFNAGPGSDCHRAFTHPGRLTRPFFDVFDGDNSGTFHKFTGDAV 217 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID+ + + G SDH P+ ++ Sbjct: 218 SDRIDWILCRNMGGPREK---------RIITDRFAGIFPSDHFPVYAEFS 258 >gi|283853514|ref|ZP_06370755.1| Endonuclease/exonuclease/phosphatase [Desulfovibrio sp. FW1012B] gi|283571095|gb|EFC19114.1| Endonuclease/exonuclease/phosphatase [Desulfovibrio sp. FW1012B] Length = 251 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 35/279 (12%), Positives = 76/279 (27%), Gaps = 55/279 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++N++ D + + L AD+V LQE+ + + Sbjct: 9 LRVATYNVHG-----------WKSLGGRRDIGRFVETIRELAADVVALQEVVMPPLIEEE 57 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + A+ + + + L R Sbjct: 58 CLERAVAGPLGMHAVSGPT--LTRLGTEYGNALLTRFPVEQSRGHDLSVRGC-----EPR 110 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 AVE+++ + G ++ V+ HL Q + L + + V Sbjct: 111 GAVEVVLAVPGGRLRVIATHLGLR-------------ARERRIQTEALLALVR--ERQDV 155 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 P V+ GDFN + + + + + +D Sbjct: 156 PTVLLGDFNEWMPANRTVRAVSREL-----------GATPAPATFPSCFPVLSLDRIWTS 204 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 L + + SDH P+ + Sbjct: 205 PGLA-----------LTSLRRHRPAYATCSDHLPLVAEL 232 >gi|254464804|ref|ZP_05078215.1| endonuclease/exonuclease/phosphatase family protein [Rhodobacterales bacterium Y4I] gi|206685712|gb|EDZ46194.1| endonuclease/exonuclease/phosphatase family protein [Rhodobacterales bacterium Y4I] Length = 331 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 100/328 (30%), Gaps = 49/328 (14%) Query: 24 VRLVSWNINTLS----EQEGVSLWKNSVKRTTSDY----TLLRQYAKNLDADIVFLQEMG 75 +RL ++NI + + + + L D + + LDAD V + E Sbjct: 1 MRLATYNIEWFAYLFDKNDRLVLDGKPSGVYGVDRYTQGRAIAHVLRRLDADAVMVIEAP 60 Query: 76 SYNAVAKVFPKNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-------- 126 + + + S ++ A+ + + Sbjct: 61 NTGRTQRTTRALEAFAAEAGLRACEAVSGFPNDTHQEIALLYDPEVLAAEHDARASAAAP 120 Query: 127 ------SYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSP 179 L + A ++ +EL V G ++ ++ HLKS + Sbjct: 121 QFDGLFEIDLDVDDHLDTVAFSKPPLELAVTTRGGTRLRMIGAHLKSKAPHGASAPEEIT 180 Query: 180 SC-----SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-------- 226 + QA+WL + + ++ GD N G DF + Sbjct: 181 ALTIANQRKQLAQARWLHLRVADHVAAGEHVIVLGDLNDGPGADGYEKDFGQSSIEIVLG 240 Query: 227 --TIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAY----KFLIQESF 275 DP+ + P+ + +DY ++ + ++ I F Sbjct: 241 DLLNDPHAQSLLQPRATSLPSTSRFYNPDTKRYFPALLDYVMISHSLMRFDPQWRIWHPF 300 Query: 276 SE-ILYNEDDIKSRGKRLSDHCPISIDY 302 + Y +++++ SDH P+++D Sbjct: 301 EDAECYADEELREALLNASDHFPVTLDI 328 >gi|182626212|ref|ZP_02953970.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens D str. JGS1721] gi|177908476|gb|EDT71009.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens D str. JGS1721] Length = 262 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 93/285 (32%), Gaps = 33/285 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+ + + + W + + + K+ DI+ QE + Sbjct: 4 LKVMTFNLKYDFKAQDNNEW-------SQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMD 56 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + ++ + V + N L + P + F+ + R Sbjct: 57 DLLDEYSWVGEDLEGNGKDEFNAIFFLKNKFEVLEWNQFWLSK-TPNIKGSKDFNSSLPR 115 Query: 144 RAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +L + +I+G KI + + HL E ++ ++ + + Sbjct: 116 ICTKLKLKDKISGLKIDIYNTHL-----DHESELAREEGIKIILKEVK------KNYEIY 164 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP--KEKDSRCNANKNLRNKIP-ID 258 P++I GDFN + N + + + + K ID Sbjct: 165 KTPYIIMGDFNCYLEDNLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGYDGRIID 224 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 Y + + + N D+ K G SDH P+ + + Sbjct: 225 YILYSKE---------YEIKSLNIDNRKINGGYPSDHYPVICELE 260 >gi|323528578|ref|YP_004230730.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1001] gi|323385580|gb|ADX57670.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1001] Length = 302 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 82/313 (26%), Gaps = 58/313 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 +RLV WNI +G D + + A+ L D DI+ +QE+ Sbjct: 1 MRLVDWNIQWGRGVDG-----------RVDLARIVREARALVDFDIMCMQEVTRGFHEPA 49 Query: 75 --------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 S + A++ A+ + Sbjct: 50 SAGGLAGGPSADQFAELGALLPGMTVIDAIGSDLPPVGAGTRRRQFGNAIVTRLPVRQVL 109 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 + L D + R A+E ++E + + V+ HL+ + ++ L Q Sbjct: 110 RHSLPWPADPAKPSMLRVALEAVIETDVGPLRVISTHLEFYS--ETQRLAQVDRLRALHQ 167 Query: 187 QAQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 +A ++ PF ++ GDFN + Sbjct: 168 EACEHARRPAHAEKQDSPFADTGRPMSAIVCGDFNSAFGSAAYRKMLKAVPGAPAFADAW 227 Query: 238 PKEKDSRCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 A D+ + ++ + Sbjct: 228 ACAHADSPRAATVGLYDHEQWADGPFACDFIFVTEDLAPRVASCEV-----------DPH 276 Query: 290 KRLSDHCPISIDY 302 R SDH P+ ++ Sbjct: 277 SRSSDHQPMWLEL 289 >gi|190893918|ref|YP_001980460.1| phosphatase [Rhizobium etli CIAT 652] gi|190699197|gb|ACE93282.1| putative phosphatase protein [Rhizobium etli CIAT 652] Length = 288 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 78/315 (24%), Gaps = 65/315 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 + S+NI +G D + + AD++ LQE+ Sbjct: 1 MNFASYNIQYGFGLDG-----------RYDLPRIARSL--EGADVIALQEVTRGFSRNGF 47 Query: 75 -GSYNAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 +A +FP W E V + ++ Sbjct: 48 ADMVADIAALFPDYFWVYGPACDLHVEAPEGGLSPVRGIRFQFGNMVLSRWPIASTRTLL 107 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 L ++ R A E ++ G I V +HL L+ Q Sbjct: 108 LPRSRTLGKINPQRGATEAVINAPGGAIRVYSVHLDHVSPD-----ERIRQLQFLNAQIN 162 Query: 190 WL----------KDWITQKKESLVPFVIAGDFNRKINYLGN-------NDDFWKTIDPND 232 ++ + +VI GDFN + + + Sbjct: 163 AFVQEGGSLTGAAEFDLPEPPLPEDYVILGDFNMEPESPEYCALAGAAGGYYGRVARIGT 222 Query: 233 SLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + F + R + ++ +DY + L Sbjct: 223 PIDAFAALEAYRPESYSWMNPENHGERMHLDYCFVSCGLVSRLQSARI-----------D 271 Query: 288 RGKRLSDHCPISIDY 302 SDH P+ ++ Sbjct: 272 TQSPGSDHFPLWVEI 286 >gi|296414577|ref|XP_002836975.1| hypothetical protein [Tuber melanosporum Mel28] gi|295632822|emb|CAZ81166.1| unnamed protein product [Tuber melanosporum] Length = 290 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 37/296 (12%), Positives = 81/296 (27%), Gaps = 20/296 (6%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 T +RL + NI + + + R + + + ++ LQE+ Sbjct: 4 TNTPPSPLPLRLYTHNIRYATTHP-LPHESSWPTRLPRIISSIAYTQHQHPSTLLCLQEV 62 Query: 75 GSYNAVAKV-FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 ++ + ++ + + S T + K P + Sbjct: 63 LRTQLLSILSLLPRSYNYIGRARDDGHEAGEYSPVIYDTEVWRLDKWRSKWLSPTPERPS 122 Query: 134 KDSFSRAGNRRAV--ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 K + A R +G+++ VL+ HL D S ++ ++ + + Sbjct: 123 K-GWDAACIRILTVGYFTHWESGRRVVVLNTHL-----DDQGAVARRESARMIVEEVREV 176 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT-IDPNDSLIRFPKEKDSRCNANKN 250 + V+AGD N + + P ++ Sbjct: 177 L-----GEGEGRGVVLAGDMNSPEGDDAYKIFTASGSLLRDARADVPPAKRYGHQMTFSG 231 Query: 251 LRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N ID+ + ++ SDH P+ +D Sbjct: 232 FGNEHEIPQRIDFVFAAEAKEDDEKAIWTITNYSVLENKFDDEIYSSDHRPVVVDL 287 >gi|254702100|ref|ZP_05163928.1| Endonuclease/exonuclease/phosphatase family protein [Brucella suis bv. 5 str. 513] gi|261752670|ref|ZP_05996379.1| endonuclease/exonuclease/phosphatase [Brucella suis bv. 5 str. 513] gi|261742423|gb|EEY30349.1| endonuclease/exonuclease/phosphatase [Brucella suis bv. 5 str. 513] Length = 369 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 44/366 (12%), Positives = 98/366 (26%), Gaps = 86/366 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKN----------------SVKRTTSDYTLLRQY------- 60 + ++N+ L + S ++N + R + Sbjct: 2 FTIATFNVENLMRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMT 61 Query: 61 ---AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 ADI+ LQE+ + A+ + + R + + I A+ +R Sbjct: 62 ALAIAENRADILCLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121 Query: 118 ------KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKI 157 + S+ L D R R + + + I G+ + Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 181 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNR 213 + HLKS + ++ + S + +A+ ++ I +K + ++I GDFN Sbjct: 182 SLFVAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 241 Query: 214 KINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP 256 + + ++ + Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301 Query: 257 ----IDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 +DY + + + + + SDHCP Sbjct: 302 HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHCP 361 Query: 298 ISIDYD 303 +S+ + Sbjct: 362 VSVTLN 367 >gi|239980898|ref|ZP_04703422.1| hypothetical protein SalbJ_15743 [Streptomyces albus J1074] gi|291452759|ref|ZP_06592149.1| conserved hypothetical protein [Streptomyces albus J1074] gi|291355708|gb|EFE82610.1| conserved hypothetical protein [Streptomyces albus J1074] Length = 290 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 100/325 (30%), Gaps = 70/325 (21%) Query: 2 IRKYVLALVFFLVPCTASVAQ---------KVRLVSWNINTLSEQEGVSLWKNSVKRTTS 52 +R++V+ L+ + + A +R+ ++NI+ + ++ V Sbjct: 7 LRRHVVPLLLAVGLVLTASATAHPATPRPVPLRVATYNIHAGAGEDEVF----------- 55 Query: 53 DYTLLRQYAKNLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHSKR 104 D + ++LDAD++ LQE+ + ++ + + ++ ++ Sbjct: 56 DLDRQVRALRSLDADVIGLQEVDVHWGERSQWRDLARELAHRLGMHVAFAPIYSLDPEPA 115 Query: 105 DSN---NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR---RAVELLVEINGKKIW 158 + +AV ++ + +++ + ++ V + G + Sbjct: 116 AAGPTPPRREFGVAVLSRHPVLRVRNHEITRLSTQGENPLPEPGPGFLQATVAVRGIPLD 175 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP-FVIAGDFNRKINY 217 V HL Y P ++ + Q + + + P ++ GDFN + + Sbjct: 176 VYATHL-----------DYRPDPAVRAAQVADMLRVMDRPCPVRCPAHLLLGDFNARPDA 224 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 L ++ D IDY + + Sbjct: 225 PEL-----------TPLWATLRDADPGAPTFPASAPDRRIDYVATSAGIGLRRAWTAPTG 273 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302 I SDH P+ D Sbjct: 274 I-------------ASDHLPVVADL 285 >gi|62290271|ref|YP_222064.1| hypothetical protein BruAb1_1372 [Brucella abortus bv. 1 str. 9-941] gi|82700193|ref|YP_414767.1| endonuclease/exonuclease/phosphatase family protein [Brucella melitensis biovar Abortus 2308] gi|189024505|ref|YP_001935273.1| Endonuclease/exonuclease/phosphatase family [Brucella abortus S19] gi|237815777|ref|ZP_04594774.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|254689573|ref|ZP_05152827.1| Endonuclease/exonuclease/phosphatase family protein [Brucella abortus bv. 6 str. 870] gi|254697714|ref|ZP_05159542.1| Endonuclease/exonuclease/phosphatase family protein [Brucella abortus bv. 2 str. 86/8/59] gi|254730604|ref|ZP_05189182.1| Endonuclease/exonuclease/phosphatase family protein [Brucella abortus bv. 4 str. 292] gi|256045007|ref|ZP_05447910.1| Endonuclease/exonuclease/phosphatase family protein [Brucella melitensis bv. 1 str. Rev.1] gi|256257822|ref|ZP_05463358.1| Endonuclease/exonuclease/phosphatase family protein [Brucella abortus bv. 9 str. C68] gi|256369791|ref|YP_003107302.1| Endonuclease/exonuclease/phosphatase family protein [Brucella microti CCM 4915] gi|260546815|ref|ZP_05822554.1| endonuclease/exonuclease/phosphatase family protein [Brucella abortus NCTC 8038] gi|260565390|ref|ZP_05835874.1| endonuclease/exonuclease/phosphatase family protein [Brucella melitensis bv. 1 str. 16M] gi|260755101|ref|ZP_05867449.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 6 str. 870] gi|260758320|ref|ZP_05870668.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 4 str. 292] gi|260762146|ref|ZP_05874489.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 2 str. 86/8/59] gi|260884113|ref|ZP_05895727.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 9 str. C68] gi|265991436|ref|ZP_06103993.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 1 str. Rev.1] gi|297248660|ref|ZP_06932378.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 5 str. B3196] gi|62196403|gb|AAX74703.1| hypothetical conserved protein [Brucella abortus bv. 1 str. 9-941] gi|82616294|emb|CAJ11351.1| Endonuclease/exonuclease/phosphatase family [Brucella melitensis biovar Abortus 2308] gi|189020077|gb|ACD72799.1| Endonuclease/exonuclease/phosphatase family [Brucella abortus S19] gi|237789075|gb|EEP63286.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|255999954|gb|ACU48353.1| Endonuclease/exonuclease/phosphatase family protein [Brucella microti CCM 4915] gi|260095865|gb|EEW79742.1| endonuclease/exonuclease/phosphatase family protein [Brucella abortus NCTC 8038] gi|260151458|gb|EEW86552.1| endonuclease/exonuclease/phosphatase family protein [Brucella melitensis bv. 1 str. 16M] gi|260668638|gb|EEX55578.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 4 str. 292] gi|260672578|gb|EEX59399.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 2 str. 86/8/59] gi|260675209|gb|EEX62030.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 6 str. 870] gi|260873641|gb|EEX80710.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 9 str. C68] gi|263002220|gb|EEZ14795.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 1 str. Rev.1] gi|297175829|gb|EFH35176.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 5 str. B3196] Length = 369 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 44/366 (12%), Positives = 98/366 (26%), Gaps = 86/366 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKN----------------SVKRTTSDYTLLRQY------- 60 + ++N+ L + S ++N + R + Sbjct: 2 FTIATFNVENLMRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMT 61 Query: 61 ---AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 ADI+ LQE+ + A+ + + R + + I A+ +R Sbjct: 62 ALAIAETRADILCLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121 Query: 118 ------KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKI 157 + S+ L D R R + + + I G+ + Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 181 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNR 213 + HLKS + ++ + S + +A+ ++ I +K + ++I GDFN Sbjct: 182 SLFVAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 241 Query: 214 KINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP 256 + + ++ + Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301 Query: 257 ----IDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 +DY + + + + + SDHCP Sbjct: 302 HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHCP 361 Query: 298 ISIDYD 303 +S+ + Sbjct: 362 VSVTLN 367 >gi|183599301|ref|ZP_02960794.1| hypothetical protein PROSTU_02765 [Providencia stuartii ATCC 25827] gi|188021535|gb|EDU59575.1| hypothetical protein PROSTU_02765 [Providencia stuartii ATCC 25827] Length = 271 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 83/310 (26%), Gaps = 73/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +S+NIN L + L +++ LQE ++ Sbjct: 1 MKFISFNINGL----------------RARPHQLAAIIDKHQPEVIGLQE---TKVHDEM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + H +A+ KN V + D+ R Sbjct: 42 FPYD-------DVSKLGYHVFYHGQKAHYGVALLTKNKPVAVRKGFPTDDDDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + +E N + V++ F + + Q L+D+IT + Sbjct: 90 RIIMADIETNHGLLTVVN-----GYFPQGESREHPVKFPAKEKFYQDLQDYITSTQTPQS 144 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 +I GD N L + + + + + Sbjct: 145 QLLIMGDMNISPTDLDIGIGEANRKRWLKTGKCSFLPEERAWMERLLNWGLVDTYRAMNP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + D ++ S Sbjct: 205 DVDDCYSWFDYRSKGFDDNRGLRIDLLLASTALSTRCVATGI-------DYEIRGMEKPS 257 Query: 294 DHCPISIDYD 303 DH P+ ++D Sbjct: 258 DHAPVWAEFD 267 >gi|298207487|ref|YP_003715666.1| hypothetical protein CA2559_04510 [Croceibacter atlanticus HTCC2559] gi|83850123|gb|EAP87991.1| hypothetical protein CA2559_04510 [Croceibacter atlanticus HTCC2559] Length = 324 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 34/318 (10%), Positives = 83/318 (26%), Gaps = 51/318 (16%) Query: 25 RLVSWNINTLSEQEGVSLWKNS-----------VKRTTSDYTLLRQYAK--------NLD 65 + +N+ L + + ++ R + + Sbjct: 16 TIAFYNVENLFDHIQDTNILDTDFIPTSDRKWDQNRYEKKLNKIAKVIASIGTSDTHKHP 75 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV-RVL 124 I+ L E+ + + + N I TA+ RK V Sbjct: 76 PLIIGLAEVENKKVLKDLVNTEALSSLKYDFVHYNSPDE---RGIDTALLYRKNYVNITQ 132 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 +S+ L R R +++ + ++I L H S L + + Sbjct: 133 SKSHELYIETPEGIRDFTRDILQVSCTLLQEQITFLVNHWPSRRDGSGLTEYKRVNAASK 192 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + + + +++ ++ F++ GDFN + Sbjct: 193 N---KAILRALSK-EQPNQRFIVMGDFNDDPHDNSIKSLI-----EFGLYNPMETLLTKS 243 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQ-------------------ESFSEILYNEDDI 285 K + D ++ + K+ + + + Sbjct: 244 KGTTKYKGHWNLFDQVIISHSFLKYQKKKLNFKSASIYDPEFLKQRHGKYKGTPHRTFGG 303 Query: 286 KSRGKRLSDHCPISIDYD 303 ++ SDH P+ + + Sbjct: 304 RNYTGGYSDHFPVYVTLE 321 >gi|307725679|ref|YP_003908892.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003] gi|307586204|gb|ADN59601.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003] Length = 258 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 83/284 (29%), Gaps = 56/284 (19%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + +R+V++NI+ +G + + L+AD+V LQE+ Sbjct: 27 ASHAGEPLRIVTYNIHGAVGTDGKRSG-----------ARIAEVISALNADVVALQEVPL 75 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 A + + + T D AV ++ L S Sbjct: 76 GGAASIDILRELQDL---TGMHAVPGPTLDGPDRRFGNAVLTNLPVRAIRTLDL-----S 127 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 F R A+++ ++ + ++ HL S Q + L + Sbjct: 128 FGSREARGALDVDIDTGNGLMRIVATHLGL-------------SARERRAQVRLL---LE 171 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 +P ++ GD N + RF + R ++ Sbjct: 172 AFDTPELPVILLGDLNEWFVWGWPMRALL---------TRFGRVAAPRTFPSRFPTF--A 220 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +D + A ++ + D + SDH P+ Sbjct: 221 LDRVWVHPAAR----------LVDIQVDKSRPARIASDHLPLVA 254 >gi|225018561|ref|ZP_03707753.1| hypothetical protein CLOSTMETH_02510 [Clostridium methylpentosum DSM 5476] gi|224948663|gb|EEG29872.1| hypothetical protein CLOSTMETH_02510 [Clostridium methylpentosum DSM 5476] Length = 300 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 83/289 (28%), Gaps = 38/289 (13%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 Q ++++S+N+ W N + + + DADI+ +QEM Sbjct: 34 QTIQIMSFNLRRDPFYTKRFGWGN-------RRDGVIEIIRQSDADIIGVQEMTPEMKKD 86 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + IF + + + + V + L + P + Sbjct: 87 LETKLDEFSIFGTGRSRKLLGEYSGILVRNETVEVLSNHTFWLSK-NPDKQGSHALLAPF 145 Query: 142 NRRA--VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R +E+ ++ + +++ V + H + AQ + +I Sbjct: 146 PRICTTIEVYLKRSKQRMRVFNTHFDHISWF------------ARKLSAQTILKYIRDYN 193 Query: 200 ESLV-PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-- 256 P ++ GDFN K + + F S N Sbjct: 194 SKDPLPVILTGDFNAKPYSKAIK-MLITSNEYVSLNNIFTAFDISDTYINTYHGFSDRLS 252 Query: 257 ---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IDY + F + K G+ SDH PI Sbjct: 253 KYPIDYIFFSND---------FVVNDFQILKNKPNGEYPSDHFPILARL 292 >gi|254694063|ref|ZP_05155891.1| Endonuclease/exonuclease/phosphatase [Brucella abortus bv. 3 str. Tulya] gi|261214359|ref|ZP_05928640.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 3 str. Tulya] gi|260915966|gb|EEX82827.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 3 str. Tulya] Length = 369 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 44/366 (12%), Positives = 97/366 (26%), Gaps = 86/366 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKN----------------SVKRTTSDYTLLRQY------- 60 + ++N+ L + S ++N + R + Sbjct: 2 FTIATFNVENLMRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMT 61 Query: 61 ---AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 ADI+ LQE+ + A+ + + R + + I A+ +R Sbjct: 62 ALAIAETRADILCLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121 Query: 118 ------KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKI 157 + S+ L D R R + + + I G+ + Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 181 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNR 213 + HLKS + ++ S + +A+ ++ I +K + ++I GDFN Sbjct: 182 SLFVAHLKSMSGARNGQDGRPSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 241 Query: 214 KINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP 256 + + ++ + Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301 Query: 257 ----IDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 +DY + + + + + SDHCP Sbjct: 302 HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHCP 361 Query: 298 ISIDYD 303 +S+ + Sbjct: 362 VSVTLN 367 >gi|172065587|ref|YP_001816299.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MC40-6] gi|171997829|gb|ACB68746.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MC40-6] Length = 269 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 49/285 (17%), Positives = 87/285 (30%), Gaps = 56/285 (19%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 A + +R+ ++NI K T + Q LDAD++ LQE+ Sbjct: 21 PAAPGGRDLRIATYNIRG-----------GYGKWHTRAAHRIAQVIHELDADVIALQEVP 69 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 P + +T + AV + ++ L Sbjct: 70 LGGTH---APDVLAHLRDATGMHAVAGPTIDTPERRYGNAVLSRCPIRAARTLDL----- 121 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 SF + R A++ ++ + I V+ HL S S S Q Q L + Sbjct: 122 SFHQREPRGALDADIDCSAGMIRVVATHLGL-------------SASERSAQVQRL---L 165 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 +P ++ GD N + F + + RF + R Sbjct: 166 AAFDTGAMPVILMGDIN---------EWFVRGRALQALVTRFRRAPAPRTFPTLYPVFS- 215 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +D + ++L+ + R +R SDH P+ Sbjct: 216 -LDRIWIHPG--EWLVDVNVH--------RSMRARRASDHYPLVA 249 >gi|256393746|ref|YP_003115310.1| exodeoxyribonuclease III Xth [Catenulispora acidiphila DSM 44928] gi|256359972|gb|ACU73469.1| exodeoxyribonuclease III Xth [Catenulispora acidiphila DSM 44928] Length = 261 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 74/304 (24%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 VR+ +WN+N T+ L + + D+V LQE+ + + Sbjct: 3 VRVATWNVN----------------SVTARVERLVGWLDSAKPDVVCLQELKTTDEA--- 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ + D A R Sbjct: 44 -------FPAGQLADVGYQAATWGTGRWNGVAILSRLPIADVWRG-WPDLPDFDGVAEPR 95 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + L Y + L + + + Sbjct: 96 A-----LTATCGGVRVTCVYVPNGRELGHPHFDYK------LRWLDSLTASVAEPARGEL 144 Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P+ + GDFN ++ + P+ Sbjct: 145 PYAVLGDFNIAPTDADVWDMSLFAESTHVTPAERAKLADLEAQGLVEVLPRALKYD-KPY 203 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID + D + +GK SDH P+ Sbjct: 204 TYWDYRQLAFPKNNGMRIDLVFGNAAFAGA-------VRDAYVDREERKGKGASDHAPVV 256 Query: 300 IDYD 303 +D D Sbjct: 257 VDLD 260 >gi|242238792|ref|YP_002986973.1| endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech703] gi|242130849|gb|ACS85151.1| Endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech703] Length = 287 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 34/320 (10%), Positives = 84/320 (26%), Gaps = 79/320 (24%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----------G 75 +VS+NI ++ D + + ADI+ +QE+ Sbjct: 3 IVSYNIQYGLGRDN-----------RYDLARIADEVR--GADIICMQEVERFWQRSGMVD 49 Query: 76 SYNAVAKVFPKNTWCIFYS---TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 +A + + W + + R S+ + + +++PL Sbjct: 50 QPTELAALLKEYYWVYGANLDMDASIAAPDGRVSHRRRQFGTLTLSRWPMLSSRNFPLPK 109 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + + +E +++ + V + HL C Q L Sbjct: 110 FGTLTQHSIQQGVLETVIDTGTRSFRVYNTHLSHLC------------AQTRLPQVAALL 157 Query: 193 DWITQKKESLVPF-----------------------VIAGDFNRKINYLGNNDDFW---- 225 D + E + ++ GD N + + Sbjct: 158 DIFARSPEEGGAWCGGHPDPAAGWTEGAMPPMPAEMMLMGDLNCLPDSEEYSRLIGPVSP 217 Query: 226 ---KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + + + + + + + ID+ ++ + + Sbjct: 218 AHGRLVRHRGLMDAWVAAGQPESSGSTHPNVNGRIDHCLLTPTLGAEVRRCWA------- 270 Query: 283 DDIKSRGKRLSDHCPISIDY 302 + SDH P+ ++ Sbjct: 271 ----DTDNQGSDHHPLWVEL 286 >gi|188989861|ref|YP_001901871.1| putative exported nuclease [Xanthomonas campestris pv. campestris str. B100] gi|167731621|emb|CAP49799.1| putative exported nuclease [Xanthomonas campestris pv. campestris] Length = 1193 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 41/340 (12%), Positives = 96/340 (28%), Gaps = 54/340 (15%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69 P A V + ++N+ + + + +N DI+ Sbjct: 578 PAPRPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNYLHTPDIL 637 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK-----KN 120 E+ + + + + + + ++ + + + I V+ Sbjct: 638 GTVEVENISVLQTLAARINADAVAAGQQDPKYVAYLQEGNDVGGIDVGFLVKTADVSGGV 697 Query: 121 VRVLQQSYPLLGAKDSFSRAGN-------RRAVEL---LVEINGK--KIWVLDIHLKSFC 168 RV S G +++ G R + L + + +G+ + + +H +S Sbjct: 698 PRVEVVSVAQEGKATTWTEPGGAVSLLNDRPPLVLSTRVHQADGRVLPLTTIVVHQRSLN 757 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 ++ + + + QA +L + Q+ + ++ GDFN G D Sbjct: 758 GAETDDAAGTRIRAKRQAQASYLARLLQARQQLDPAERVLVMGDFNAFEFNDGYVDAMGT 817 Query: 227 T------------------IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 + D + + N +D+ + + + Sbjct: 818 VTGKPAADAQTVVSGDGIDLVEPDYTDLTWFNTPDQSYSYAFDGNVQSLDHILANDALMR 877 Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300 S S + RLSDH P + Sbjct: 878 ASNIASLSVGHARINADFPGTARNDANTPTRLSDHDPTVV 917 >gi|221640247|ref|YP_002526509.1| endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides KD131] gi|221161028|gb|ACM02008.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides KD131] Length = 339 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 42/338 (12%), Positives = 97/338 (28%), Gaps = 56/338 (16%) Query: 21 AQKVRLVSWNINTLS----EQEGVSLWKNSVKRTT----SDYTLLRQYAKNLDADIVFLQ 72 A+ +R+ ++N+ + + + R + L LDAD + + Sbjct: 2 ARPLRIATYNVEWFNGLFDDHGRLRPDNELSGRYEITRRNQIESLGIVFTALDADAIMVI 61 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E + + + + + + ++ IA+ R+ P Sbjct: 62 EAPNQSRRRSTVKALE-TFARTFDLRASRAVMGFPSETEQEIALLYDPARIEAHHDPQAS 120 Query: 133 AKDSFSR----------------AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 AK ++ +EL + +G + V+ +H KS + Sbjct: 121 AKAPRFDDVFRFDIDVDATPEAIRFSKPPLELALRADGHPLRVIGVHAKSKAPHGARNPA 180 Query: 177 Y--SPSCSLLSQQAQ---WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF------- 224 + QQ WL+ + ++ GDFN F Sbjct: 181 EAVRIAIQNRRQQLAECVWLRRRVAGLLARHQSVMVMGDFNDGPGLDEYEKLFGRSGIEI 240 Query: 225 ---------WKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFL 270 + +P+ + K +A + +D+ ++ + Sbjct: 241 VLGLEEPPELRLHEPHARMALTQKVGIQPSSARFWLAPEQQYFEALLDFIMVSADLAAKS 300 Query: 271 IQESFSE-----ILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +++ SDH P+++D D Sbjct: 301 PRWRIWHPLNDPNCFRTPELQQALLAASDHFPVTLDID 338 >gi|78046033|ref|YP_362208.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034463|emb|CAJ22108.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 1193 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 36/340 (10%), Positives = 90/340 (26%), Gaps = 54/340 (15%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69 P A V + ++N+ + + + +N DI+ Sbjct: 578 PAPVPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNYLHTPDIL 637 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK------- 118 E+ + + + + + + ++ + + + I V+ Sbjct: 638 GTVEVENLSVLQTLAARVNADAVAAGQQDPKYVAYLQEGNDVGGIDVGFLVKTAQIAGGV 697 Query: 119 -KNVRV----LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-----KIWVLDIHLKSFC 168 + + ++ S +R + L ++ + + +H +S Sbjct: 698 ARVEVLSIAQEGKTTTWTEPGGGVSLLNDRPPLVLTANVHQADGRVLPLTAIVVHQRSLN 757 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 ++ + + QA++L + Q+ ++ GDFN G D Sbjct: 758 GAETDDAAGMRIRAKRQAQAEYLARLLQTRQQLNPDEKVLVMGDFNAFEFNDGYVDAVGT 817 Query: 227 T------------------IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 + D + + N +D+ + + + Sbjct: 818 VTGKPAPDAQTVVGGDGTDLVNPDYTDLTWFNTPDQSYSYAFDGNVQSLDHILANDALMR 877 Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300 S S + RLSDH P + Sbjct: 878 APQIASLSVGHARINADFPGTARNDANTPTRLSDHDPTVV 917 >gi|292899632|ref|YP_003539001.1| exodeoxyribonuclease III [Erwinia amylovora ATCC 49946] gi|291199480|emb|CBJ46597.1| exodeoxyribonuclease III [Erwinia amylovora ATCC 49946] Length = 268 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 86/310 (27%), Gaps = 73/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L+ + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLQAIVEQHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + H +A+ K V + +D+ R Sbjct: 42 FP-------LAEVASLGYHVFYHGQKGHYGVALLCKQQPVAVRRGFASDDEDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F + + + L ++ Q+++ Sbjct: 90 RIIMADIMTPSGLLTVIN-----GYFPQGESRDHPTKFPAKEKFYRDLHSYLEQQQKPDN 144 Query: 204 PFVIAGDFNRK---------------------INYLGNNDDFWKTIDPNDSLIRFPKEKD 242 +I GD N ++L ++ + + + + Sbjct: 145 QLLIMGDMNISSGDLDIGIGEENRKRWLRTGKCSFLPEEREWMDKLMNWGLVDTWRAQHA 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + + ID + + + D ++ S Sbjct: 205 TINDRFSWFDYRSKGFDDNRGLRIDLVLASRPLADRCVATGI-------DYDIRAMEKPS 257 Query: 294 DHCPISIDYD 303 DH PI ++ Sbjct: 258 DHAPIWAEFS 267 >gi|311899750|dbj|BAJ32158.1| putative exodeoxyribonuclease III [Kitasatospora setae KM-6054] Length = 270 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 39/308 (12%), Positives = 76/308 (24%), Gaps = 67/308 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 VR+ +WNIN T+ L ++ ++ D++ LQE+ Sbjct: 2 TVRIATWNIN----------------SVTARLPKLLEWLESAAPDVLCLQELKCATDA-- 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + +A+ + A Sbjct: 44 --------FPAEAVAELGYESAAHGDGRWNGVALLSRIGLADVVRDLPAQPGYRADDADP 95 Query: 143 RRAVELL---VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 A + + + V +++ + +D Y + L+D + Sbjct: 96 AEAPVVEPRAIAATCGPVRVWSVYVPNGREVDHAHYRYK------LEWMAALRDAVRDDA 149 Query: 200 ESLVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSR 244 PF + GDFN D + P+ Sbjct: 150 AGGRPFAVLGDFNVAPTDEDVYDLAAFAGLTHVTAPERATLAALRELGLRDVVPRPLKYD 209 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + ID ++ D +GK SDH Sbjct: 210 -RPYTFWDYRALAFPKNRGMRIDLTYANEPFADA-------VTDTYVDREARKGKGTSDH 261 Query: 296 CPISIDYD 303 P+ +D D Sbjct: 262 APVVVDLD 269 >gi|241206881|ref|YP_002977977.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860771|gb|ACS58438.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 288 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 82/322 (25%), Gaps = 79/322 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 + S+NI +G D + + AD++ LQE+ Sbjct: 1 MNFASYNIQYGFGLDG-----------RYDLARIARSL--EGADVIALQEVTRGFSRNGF 47 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-----TAIAVRKKNVRVLQQSYP 129 A F + + ++ + + + V + V ++ Sbjct: 48 ADMAADVAAFFPDYFWVYGPACDMHVEADEGGFQPVRGTRFQFGNMVLSRWPVVSTRTLL 107 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 L ++ R A E +++ G I V +HL +Q + Sbjct: 108 LPRSRTIGKINLQRGATEAVIDAPGAAIRVYSVHLDHVSAD------------ERIRQLE 155 Query: 190 WLKDWITQKKESL-----------------VPFVIAGDFNRKINYLGN-------NDDFW 225 +L I + +VI GDFN + + Sbjct: 156 FLNAHINAFVQEGGSLTGGGEFDLPEPPLPEDYVIMGDFNMEPESPEYCALAGAGGGYYG 215 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 + + F + + ++ +DY + L Sbjct: 216 RVARIGTPVDAFAALEAYSPESYSWMDPEDHGKRMHLDYCFVSCGLQSRLKSARI----- 270 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 SDH P+ ++ Sbjct: 271 ------DTQSVASDHFPLWVEI 286 >gi|107101992|ref|ZP_01365910.1| hypothetical protein PaerPA_01003039 [Pseudomonas aeruginosa PACS2] Length = 270 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 38/312 (12%), Positives = 80/312 (25%), Gaps = 76/312 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L + D++ LQE Sbjct: 1 MKIVSFNINGL----------------RARPHQLAALIERHQPDVIGLQE---TKVADDQ 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + + H +A+ + + ++S R Sbjct: 42 FPQ-------AEIEALGYHVHYHGQKGHYGVALLSRQAPLELHRGFPSDGEES-----QR 89 Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + G I V++ F + + L+ + + Sbjct: 90 RFIWGTFSDAQGNPITVMN-----GYFPQGENREHPTKFPAKQRFYADLQSLLENSFKPE 144 Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241 V+ GD N ++L ++ T+ + F Sbjct: 145 QALVVMGDINISPEDCDIGIGEENRKRWLKTGKCSFLPEEREWLATLKNWGLVDSFRALN 204 Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID + + D + Sbjct: 205 PEVNDRFSWFDYRSRGFEDNPKRGLRIDVILASRVLQSRFKDAGI-------DYDLRSME 257 Query: 291 RLSDHCPISIDY 302 + SDH PI ++ Sbjct: 258 KPSDHAPIWLEL 269 >gi|171915527|ref|ZP_02930997.1| probable secreted protein [Verrucomicrobium spinosum DSM 4136] Length = 275 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 37/284 (13%), Positives = 75/284 (26%), Gaps = 50/284 (17%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 V ++ +VS+N+ + R L D+V LQE+ Sbjct: 27 EPVKAELDIVSFNLRNGGRRFDGQYDHALQHR----------VIGALKPDLVALQEVDRR 76 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + + + S A + ++ L Sbjct: 77 TSRVQGLDVPA-DFAKAQGMTFAYGAAMSFAGGEYGTAALSRLPIASSRTIALPVKGG-- 133 Query: 138 SRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R A + V + ++ ++ +H S + Sbjct: 134 ---EPRAATLITVAVPTVSPAEVTLVSVHFDSGADDAARRENARV--------------L 176 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 I KE+ P ++AGDFN + T+ + ++ + Sbjct: 177 IAALKETTTPVILAGDFNDRPGS--------TTLTLLAEAGFRRCVPEGDASSYPADEPR 228 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ A L + SDH P+ Sbjct: 229 LVIDHVLLRDGADVRLEDAGTKVVP---------NAEASDHRPL 263 >gi|99080738|ref|YP_612892.1| exodeoxyribonuclease III [Ruegeria sp. TM1040] gi|99037018|gb|ABF63630.1| Exodeoxyribonuclease III [Ruegeria sp. TM1040] Length = 268 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 83/308 (26%), Gaps = 69/308 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +++ S+NIN + L + D+ LQE+ Sbjct: 1 MKIASFNING----------------IKARVNALTDWLDEAQPDVAVLQEIKSVDEAFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++F + + + +A+ K + D +R Sbjct: 45 ELFEERGYNV------------ETHGQKSFNGVAILSKLPLEDVRRGLPGDESDEQARW- 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCF---LDSLENTYSPSCSLLSQQAQWLKDWITQK 198 +E V + + + + ++L + D + + LK + Sbjct: 92 ----IEATV-VGKQALRICGLYLPNGNPVELNDDGTPVEGGKYAYKLGWMERLKARAAEL 146 Query: 199 KESLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDS 243 +P ++AGD+N + + ++ I F Sbjct: 147 MAEEMPALMAGDYNIIPQAEDAKRPEAWREDALHRPESRAAFQRIVNLGFTEAFRTRTRG 206 Query: 244 RCNANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + ID+F++ A L D ++ SDH Sbjct: 207 PGHYTFWDYQAGAWNRDDGIRIDHFLLTPQAADLLRDCQI-------DKDIRGREKPSDH 259 Query: 296 CPISIDYD 303 PI +D D Sbjct: 260 VPIWVDLD 267 >gi|330873531|gb|EGH07680.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 380 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 43/342 (12%), Positives = 96/342 (28%), Gaps = 75/342 (21%) Query: 11 FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53 C+ +V Q +++++WNI L+ + + + + Sbjct: 52 LLAASCSTAVQAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTPEDLAYN 111 Query: 54 YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99 + + ++ DIV LQ + +A ++P +T ++ E + Sbjct: 112 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYQDQQKLLQERLADLYPCSTQAFYWKAEFVP 171 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKI 157 + S R + P+ A + + A+ + +G K+ Sbjct: 172 SPHIWGS-VGRKLTTLSRFHIDSAERLQLPVPDANIISRQFQPKNALLVSYLPLRDGGKL 230 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-- 215 V++ HL + D +Q + + + + P++I GDFN Sbjct: 231 AVINTHLATAKPGDG----------TAQKQIAATETLLDKLEGGGTPWLIGGDFNLLPLG 280 Query: 216 -------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL-----------RNKIPI 257 + + + P +S + Sbjct: 281 QYQRLPEQQRISYAADSELHTLWEKYPMIPNNTESSGTDRSQWLTHFPNDSRVNGPDRTV 340 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 DY + + S + +SDH P+ Sbjct: 341 DYLFYSPSLKR----VSARV-------RRDDTLLISDHLPVI 371 >gi|308070428|ref|YP_003872033.1| exodeoxyribonuclease [Paenibacillus polymyxa E681] gi|305859707|gb|ADM71495.1| Exodeoxyribonuclease [Paenibacillus polymyxa E681] Length = 254 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 76/303 (25%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + Y K +ADI +QE + Sbjct: 1 MKLISWNVNGLRACVTKGFYT---------------YLKETNADIFCVQETKLQEGQILM 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S I + + + R Sbjct: 46 ENMEEYTQYWNYAEKKGYSGTAIFTKI---------------KPLSVHYGLEENEEPEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + ++++++ + S Q L Sbjct: 91 -----TITLEFENFYLVNVYTPNTKRDLSRLPYRLEWEDRFRSYLQQLDAL--------K 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + F R + Sbjct: 138 PVIVCGDLNVAHQEIDLKNAKANYGNAGFTPEERERMSLLLDAGFIDTFRTFYPDRTDVY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ + L+ S + SDHCP+ Sbjct: 198 SWWSYMPKVRERNIGWRIDYFLVSERLRPLLMDASIDCHIT-----------GSDHCPVI 246 Query: 300 IDY 302 +D Sbjct: 247 LDL 249 >gi|294055186|ref|YP_003548844.1| Endonuclease/exonuclease/phosphatase [Coraliomargarita akajimensis DSM 45221] gi|293614519|gb|ADE54674.1| Endonuclease/exonuclease/phosphatase [Coraliomargarita akajimensis DSM 45221] Length = 261 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 35/291 (12%), Positives = 87/291 (29%), Gaps = 43/291 (14%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + +R ++ NI + + + + + + D+V +QE+ + Sbjct: 3 GRALRFLTLNIAHGRG-LSLYQGLHRASTIERNLQRIVRLLEREQPDVVAMQEVDGSSHW 61 Query: 81 AK---VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 K + Y+ L H++R + A+ + + A+ Sbjct: 62 NKHINLLEFLAREAGYAYHHLGVHNRRLGKLPLAYGNALLSRYPIENPDTQAFGSAE--- 118 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-- 195 G + + + + + V+++HL S Q + L ++ Sbjct: 119 --LGEKGFLYSELRLPAGHLPVVNLHLDF------------RSRQRRLDQVERLIGYLEA 164 Query: 196 TQKKESLVPF---VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 +++ + +I GDFN + D K + + S ++ Sbjct: 165 RHREKGGETYFSPIICGDFN---SSATKQRDAVKHLIGYLEGHCAYQLLPSGGKTFPSIL 221 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D+ + + + +SDH P+ D + Sbjct: 222 PMQSLDFIFVPPSHEVR--------------RCEVLKSYVSDHRPVVADLE 258 >gi|85059341|ref|YP_455043.1| exonuclease III [Sodalis glossinidius str. 'morsitans'] gi|84779861|dbj|BAE74638.1| exodeoxyribonuclease III [Sodalis glossinidius str. 'morsitans'] Length = 268 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 75/309 (24%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L L D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEAIITTLQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + H +A+ + + + + R Sbjct: 42 FP-------LEEVSRHGYHVYYHGQKGHYGVALLSREKPLAIRR-----GFSTDGAEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + V++ F + + + L+ ++ Q Sbjct: 90 RIIMADFLTPKGALTVVN-----GYFPQGENRDHPLKFPAKERFYRDLQGYVEQSHHGES 144 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 +I GD N L + + + + + + Sbjct: 145 LLLIMGDMNISPTDLDIGIGEESRKRWLRTGKCSFLPEERAWMERLLSWGLVDTYRQANP 204 Query: 243 SRCNANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + + ID + + + D + S Sbjct: 205 TDDSRYSWFDYRSRGFDENRGLRIDLLLASKPLAAVVRAAGI-------DYTIRAMDKPS 257 Query: 294 DHCPISIDY 302 DH P+ D+ Sbjct: 258 DHAPVWADF 266 >gi|315022344|gb|EFT35372.1| hypothetical protein RAYM_06065 [Riemerella anatipestifer RA-YM] gi|325336528|gb|ADZ12802.1| non-specific nuclease [Riemerella anatipestifer RA-GD] Length = 308 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 29/302 (9%), Positives = 85/302 (28%), Gaps = 30/302 (9%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD------ADIVFLQEMGSYNA 79 + +N+ L + + + ++ +V L E+G+ Sbjct: 8 VAFYNVENFFPPHTPYLPHWDNYKYHNKLHKTAHIFELINQYHNTLPILVGLAEIGNKTV 67 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + K + Y + +R + + + + K+ ++ + + + Sbjct: 68 LEDLLAKPVFGGNYHYLHYESPDERGIDVALLYDKNKITVKHSEPIRFKFEMKNEQGELY 127 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R + ++E NG+ +HL S D + ++ + + Sbjct: 128 EDTTRDVLHSVLEYNGETFHCFVMHLPSKREQDINLPKRNEILENINALIENI------I 181 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + ++ GDFN N + F + + + + D Sbjct: 182 IKDKEAVLVLGDFNENPNEDNLIQFTYHEGILELLHNPFSALYYLGNYSTYHKKEGLLFD 241 Query: 259 YFVMDQNAYKFL-----------------IQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + ++ ++ + + SDH P+ ++ Sbjct: 242 QIMFSRDFFQTSFGLTYKKAEVFNPTEIKNWDKMKNRPFRTYSGTRYLGGYSDHFPVLVE 301 Query: 302 YD 303 ++ Sbjct: 302 FE 303 >gi|254500351|ref|ZP_05112502.1| exodeoxyribonuclease III [Labrenzia alexandrii DFL-11] gi|222436422|gb|EEE43101.1| exodeoxyribonuclease III [Labrenzia alexandrii DFL-11] Length = 269 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 82/311 (26%), Gaps = 72/311 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYN 78 +++LV+WNIN ++ Q + + D++ LQE N Sbjct: 2 TNRLKLVTWNIN----------------SVRLRMPIVEQLIEEVAPDVICLQETKCPDAN 45 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 K F + + + +A K + DS Sbjct: 46 FPEKAFRTAGYEHMA-----------INGQKGYHGVATVSKLPLTNVEKRDFCNVGDSRH 94 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 V + V NG + V + ++ + D + + +++W+ Sbjct: 95 -------VAVDVPFNGSALRVHNFYVPAG--GDEPDRDKNDKFGHKLDFLGEMQEWLQGA 145 Query: 199 KESLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 + + P V+ GD N + + F + L + Sbjct: 146 ETAK-PAVLVGDLNVAPYEHDVWSHKKLLKVVSHTPIETELFETVRETGGWLDAMRQFTP 204 Query: 243 SRCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + +D+ + + S ++ Sbjct: 205 MEEKLYTWWSYRAKDWSAADKGRRLDHVWVSE-------PASNHIKSTEVLRDARGWEKP 257 Query: 293 SDHCPISIDYD 303 SDH P+ ++ Sbjct: 258 SDHAPVVAVFE 268 >gi|170734592|ref|YP_001773706.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia MC0-3] gi|169820630|gb|ACA95211.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia MC0-3] Length = 258 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 83/288 (28%), Gaps = 56/288 (19%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 +V A + +R+ ++NI+ + LDAD++ LQ Sbjct: 13 VVTAAAPGGRDLRIATYNIHG-----------GYGAWPARAVDRIAAVIDELDADVIALQ 61 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ P + +T + AV + ++ L Sbjct: 62 EVPLGGTR---APDVLAHLRDATGMHAVAGPTIDTPERRYGNAVLSRCPIRAARTLDL-- 116 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 SF R A++ ++ + I V+ HL S S S Q Q L Sbjct: 117 ---SFHPREPRGALDADIDCSTGPIRVVATHLGL-------------SASERSAQVQRL- 159 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + +P ++ GD N + F + + RF + R Sbjct: 160 --LAAFDTGAMPVILLGDIN---------EWFVRGRALQALVTRFRRAPAPRTFPTVCPV 208 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +D + ++ +R + SDH P+ Sbjct: 209 FS--LDRIWIHPG----------ELLVDVVVHRSARARHASDHYPLVA 244 >gi|319783180|ref|YP_004142656.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169068|gb|ADV12606.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 264 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 84/302 (27%), Gaps = 66/302 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V+WNIN + L + DIV LQE+ + + Sbjct: 1 MKIVTWNING----------------VRARIGNLTHWLTESAPDIVCLQEIKTVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ +A+ K D +R Sbjct: 41 ------QFPRAEIEALGYNVETHGQKGFNGVALLSKLRFDEVIRGLPGDDADEQARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + + + V ++L + +D L+ W ++ Sbjct: 92 --IEGVFSTDKGALRVASLYLPNGNPIDDE-----KKFPYKLSWMARLERWAEERLRLEE 144 Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----------NANK 249 V+AGD+N + + + + F + + + Sbjct: 145 ALVLAGDYNVIPEPIDARFPENWLGDALFQPQTRQAFRRLLNLGFTEAVRAVTDARDTYT 204 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A S + + ++ SDH P++I Sbjct: 205 FWDYQAGAWQKNNGIRIDHLLLSPEAANRFSSASIEKHV-------RAWEKPSDHVPVAI 257 Query: 301 DY 302 D Sbjct: 258 DL 259 >gi|309812434|ref|ZP_07706189.1| endonuclease/exonuclease/phosphatase family protein [Dermacoccus sp. Ellin185] gi|308433739|gb|EFP57616.1| endonuclease/exonuclease/phosphatase family protein [Dermacoccus sp. Ellin185] Length = 800 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 37/321 (11%), Positives = 79/321 (24%), Gaps = 63/321 (19%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQEMGSYNAVA-- 81 + ++N+ L+ + + Y L D++ L+E+ N Sbjct: 484 VATFNVENLAPSDP-----------QTKYDRLAGQITGNLHSPDVLALEEIQDNNGAQND 532 Query: 82 ----------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN----- 120 K T+ + +I R Sbjct: 533 GTVDSSTTVKKLVDTIKAAGGPTYQARWVD-PENGKDGGQPGGNIRQVFLYRTDRGTSFV 591 Query: 121 -----------------VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 + P + + +R+ + + G K++V+ H Sbjct: 592 DKGTPGATTATGVTGRGLFTDLTVSPGRIDPTNTAFTDSRKPLVGEFKFRGTKVYVIANH 651 Query: 164 LKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINY 217 S D L + S + QA ++ +I + + V GD N Sbjct: 652 FNSKGGDDPLFGRWQQPVRSSETQRHAQATVVRGFIDKLLAADPNARIVTLGDLNDFEFS 711 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 D + + N +D+ ++ + + + Sbjct: 712 RTT--DILVGNRKTAMTDLPRTLPANERYSYVYEGNSQILDHILLSPKLAQPWLGLAKPL 769 Query: 278 ILYNE-DDIKSRGKRLSDHCP 297 Y+ + SDH P Sbjct: 770 FNYDIVHTNSEFPDQDSDHDP 790 >gi|145219569|ref|YP_001130278.1| endonuclease/exonuclease/phosphatase [Prosthecochloris vibrioformis DSM 265] gi|145205733|gb|ABP36776.1| Endonuclease/exonuclease/phosphatase [Chlorobium phaeovibrioides DSM 265] Length = 341 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 34/316 (10%), Positives = 85/316 (26%), Gaps = 54/316 (17%) Query: 26 LVSWNINTLSE-------QEGVSLWKNSVKRTTSDYT----LLRQYAKNLD--------A 66 ++ WN+ L + + + T + ++ Sbjct: 33 VMWWNLENLFDTRDDPSTNDSDFTPSGKLHWTAKKLKLKQMRIAFVISAIEKHPDYRRFP 92 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 DIV + E+ + + K + + + I +A K + Sbjct: 93 DIVAVCEVENEAVLKATMAKVPKVHYKTLHHDSPDIR-----GIDVGLAYNPKTLAPTGM 147 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 + + R V G+ + ++ H S F + + + Sbjct: 148 KTYCVPLEG----RPTRDIVVAGFTAGGRPLHLVLNHWPSRAFDTRWTEKKRIAAATV-- 201 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW------KTIDPNDSLIRFPKE 240 A+ + D + Q+ ++ GDFN + + + + D+ + + Sbjct: 202 -ARAIVDSLLQR-NPQADIILMGDFNDEPGDRSLKETLGSSFSREQVLSEPDTYLYNCWD 259 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLI----------------QESFSEILYNEDD 284 + + + ID ++ + S S+ + + Sbjct: 260 GHDGEGSYRYRGHWEQIDQMLVSSGMLQKSGLRLDSKPFSCFAISPMFPSNSKYPWRTYE 319 Query: 285 IKSRGKRLSDHCPISI 300 SDH P+ + Sbjct: 320 KGKYSGGYSDHLPLLL 335 >gi|16329547|ref|NP_440275.1| extracellular nuclease [Synechocystis sp. PCC 6803] gi|1652030|dbj|BAA16955.1| extracellular nuclease [Synechocystis sp. PCC 6803] Length = 1879 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 42/340 (12%), Positives = 92/340 (27%), Gaps = 57/340 (16%) Query: 16 CTASVAQKVRLVSWNINTLSEQ----------EGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 +V +++ +N+ + ++ L +D Sbjct: 1320 TPENVGGSLKVTGFNVLNYFKTIDLSGVSTAIGQDPRGADTTAEFDRQTDKLVTALLAID 1379 Query: 66 ADIVFLQEMGSY-------NAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVR 117 AD++ L E+ + NA+ + + T +N + D I + + Sbjct: 1380 ADVLGLAELENDFLPGSSGNAIENLVNELNAVAGAGTYNWVNPGTQFLGTDAIAVGLIYK 1439 Query: 118 KKNVRVLQQSYPLLG----AKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKS----- 166 V ++ + L ++ NR V + G+ + H KS Sbjct: 1440 VSAVSLVGDAAILNTQAFLDPNNTGENRNRPTVAQTFRDLVTGETFTAVVNHFKSKGASG 1499 Query: 167 ------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYL 218 + ++ AQ L W+ + +++ GD+N Sbjct: 1500 LTAGDAGNPDSDQNDGQGFWNDTRTKAAQELVTWLNTNPTGVNDSDYLLLGDYNAYAQED 1559 Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 K ++ + + + +DY + + + I Sbjct: 1560 PI-----KALESAGYVNLGAQFSGGTNTSYVFDGQTGTLDYAFASASLAAQVTGATEWGI 1614 Query: 279 LYNEDDIKSRG---------------KRLSDHCPISIDYD 303 +E D R SDH PI + + Sbjct: 1615 NADEADALDYNLDFGRDVNIFDGTVPYRSSDHDPIIVGLN 1654 >gi|260591557|ref|ZP_05857015.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella veroralis F0319] gi|260536588|gb|EEX19205.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella veroralis F0319] Length = 326 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 41/334 (12%), Positives = 102/334 (30%), Gaps = 47/334 (14%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSE-------QEGVSLWKNSVKRTTSD 53 M+R ++ L+ + + + ++ +V N L + + L + T + Sbjct: 1 MLRLFLTFLLGVIPLYSEAQSR-FTIVELNTENLFDARHDTLKNDYEFLPNSPRHWTRAK 59 Query: 54 ----YTLLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH 101 Q D+V L E+ + + + + ++ + + Sbjct: 60 YWKKLNRTGQTIIACGEDSCGWRLPDLVGLCEVENDSVLFDLTKRS-----LLRKARYEY 114 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVL 160 SN+ +A+ + + R + + ING + VL Sbjct: 115 VMTSSNDMRGIDVALLYSPFSFRLLKTDTIRVSLIANMQPTRDILYVKGAIINGDTLHVL 174 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 +H S + P + Q + D I ++ S ++ GDFN + Sbjct: 175 LLHAPSRRGGE---MQSQPFRKHVMMQVSNVVDSIQRR-HSDAKVIVMGDFNDYADSPSL 230 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 + + + + K K+ + +D ++ +N +++ ++ + Sbjct: 231 KPLYKRNLLN---VSAQAKGKNGAKGTYRYHGEWGSLDQILISENLRSYVLSCHINDAPF 287 Query: 281 --------------NEDDIKSRGKRLSDHCPISI 300 + + SDH P+ + Sbjct: 288 LLEEDIKYGGVKPRRDYNGMRYNNGFSDHLPLVL 321 >gi|325270240|ref|ZP_08136847.1| endonuclease/exonuclease/phosphatase family protein [Prevotella multiformis DSM 16608] gi|324987541|gb|EGC19517.1| endonuclease/exonuclease/phosphatase family protein [Prevotella multiformis DSM 16608] Length = 347 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 45/351 (12%), Positives = 96/351 (27%), Gaps = 64/351 (18%) Query: 2 IRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSE-------QEGVSLWKNSVKRT 50 +RK + L ++ T++ AQK + +N L + + S Sbjct: 1 MRKLLFVLFCTVLLGTSASAQKKFSVYAVGFYNQENLFDCTHDEGKNDYDFTPDGSYHWN 60 Query: 51 T----SDYTLLRQYAKNLDADI--------VFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + + D+ + L E+ + + + + + + Sbjct: 61 EMKYTHKLHNMATVLSEMGTDVLPKVGCALIGLAEVENDHVMRDLVAQPE---LAARGYH 117 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 H + + I A+ K + P + S R + + + G+ + Sbjct: 118 FVHIEGPDHRGIDCALLFNPKFFTIRNTKLVPYVYDLPKDSTRATRGFLTVSGTMAGEHV 177 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 V+ HL S Q + LKD + + + V ++ GD N Sbjct: 178 TVVVCHLPSRGADSYYRELGGR-------QVKALKDSL-FRDDKDVKVIVMGDMNDDPTD 229 Query: 218 LGNNDDFWKTID------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 +D + + + + D +M N Sbjct: 230 KSIHDCLSAKAEISEVGPGDMYNPWYNVLVKEGTGTLQYQGKWNLFDQIIMTPNLLDKEG 289 Query: 272 QESFSEILYNEDDIKSRGK-----------------------RLSDHCPIS 299 ++ F E+ + ++ I R SDH P+ Sbjct: 290 KKDFRELKFWKNQIFRRDYLFQETGKYKGNTKRTTAGGVWLDGYSDHLPVV 340 >gi|330967692|gb|EGH67952.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 380 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 45/342 (13%), Positives = 95/342 (27%), Gaps = 75/342 (21%) Query: 11 FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53 C +V Q +++++WNI L+ + + + + Sbjct: 52 LLTASCNPAVQAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTPEDLAYN 111 Query: 54 YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99 + + ++ DIV LQ + +A ++P +T ++ E + Sbjct: 112 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYQDQQKLLQERLADLYPCSTQAFYWKAEFVP 171 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKI 157 + S R + P+ A + + A+ + +G K+ Sbjct: 172 SPHIWGS-VGRKLTTLSRFHIDSAERLQLPVPDANIISRQFQPKNALLVSYLPLRDGGKL 230 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 V++ HL + D +Q + + + + P++I GDFN Sbjct: 231 AVINTHLATAKPGDG----------TAQKQIAATETLLDKLEGGGTPWLIGGDFNLLPLG 280 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-------------KNLRNKIPI------- 257 + I + N + N I Sbjct: 281 QYQRLPEQQRISYTADSELHTLWEKYPMIPNNTESSGTDRSQWLTHFPNDSRINGPDRTV 340 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 DY + + S + +SDH P+ Sbjct: 341 DYLFYSPSLKR----VSARVRRDDTLL-------ISDHLPVI 371 >gi|255327369|ref|ZP_05368443.1| exodeoxyribonuclease III [Rothia mucilaginosa ATCC 25296] gi|255295649|gb|EET74992.1| exodeoxyribonuclease III [Rothia mucilaginosa ATCC 25296] Length = 291 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 41/319 (12%), Positives = 87/319 (27%), Gaps = 62/319 (19%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 F + +R+ S N+N + + + + D DI+ L Sbjct: 3 FSNTPAPRPSGLLRVASVNVNGIRAAYKKD---------------MAAWLASRDIDILCL 47 Query: 72 QEMGSYNAV-AKVFPKNTWCIFYSTERLINHSKRDSNNDI--HTAIAVRKKNVRVLQQSY 128 QE+ + +A+ ++ ++ W I ++ + ++A + + + + Sbjct: 48 QEVRAPDAIVRELLDESQWHILHAEAAAKGRAGVLVATRRTPNSAGELLENQPVATRSNI 107 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 DS + NGK + V+ ++ S ++ + + Sbjct: 108 GEEYFDDSGRWVEADYVL-----PNGKTLTVVSAYVHSGEVGTQKQDDKYRFLERMLVRM 162 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPND 232 L +I GD N L + F + Sbjct: 163 PELAK-------HSDHVLIVGDLNVGHTELDIKNWKANQKRAGFLPEERAYFDRFFGDIG 215 Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + IDY + + + D Sbjct: 216 YRDVARELAGQVPGPYTWWSYRGKAFDNDAGWRIDYHMATPALAESAV-------EAVVD 268 Query: 284 DIKSRGKRLSDHCPISIDY 302 S +R SDH P+ +DY Sbjct: 269 RAASYDERFSDHAPLVVDY 287 >gi|326801928|ref|YP_004319747.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] gi|326552692|gb|ADZ81077.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] Length = 310 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 77/303 (25%), Gaps = 38/303 (12%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 AQ+ + ++NI + +E + +R + + + DI QE + Sbjct: 24 AQRFYVATYNIRNDNNKEDAARGDGWKQRYPI----IADLIRFHEFDIFGTQEGLYHQLE 79 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + S +T + + K + Sbjct: 80 DLKSSLPNYNYTGVGRDDGKQAGEYSAIFYNTEKFDLLDHGDFWLSTQTDYPNK-GWDAV 138 Query: 141 GNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R +++ NGK ++ ++H F S L+ + + L Sbjct: 139 LPRICSWAKLQVKANGKTLYFFNVH-----FDHVGTTARKESAKLILSKVKELA------ 187 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK--IP 256 ++ GDFN + I + + + N N +K Sbjct: 188 --GNHTAILTGDFNVDQHSNSYQVLEQSHILQDAFEAAPFRYVTNGTFNNFNPNSKTDSR 245 Query: 257 IDYFV----------------MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ID+ R + SDH P+ I Sbjct: 246 IDHIFLTTDFKVHKYGILTDTYRSTLQNPQEAYQSGNFPKEVRLTDHRARVPSDHFPVMI 305 Query: 301 DYD 303 D Sbjct: 306 SLD 308 >gi|254509674|ref|ZP_05121741.1| endonuclease/exonuclease/phosphatase family protein [Rhodobacteraceae bacterium KLH11] gi|221533385|gb|EEE36373.1| endonuclease/exonuclease/phosphatase family protein [Rhodobacteraceae bacterium KLH11] Length = 333 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 92/333 (27%), Gaps = 54/333 (16%) Query: 24 VRLVSWNINTLS----EQEGVSLWKNSVKRTT----SDYTLLRQYAKNLDADIVFLQEMG 75 +RL ++NI + + + + R + + LDAD + + E Sbjct: 1 MRLATYNIEWFANLFDTDDNLLADDSWSGRHDVTRAQQIEAIAKVLTALDADALLIVEAP 60 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + H+ N+ H +A+ + + P+ D Sbjct: 61 NTGKRQNTVRAL-QRFAEAFDLRTTHAVMGFANNTHQELALLFDPGTLKARHEPVGHPDD 119 Query: 136 SFSRAG-------------------NRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLEN 175 + ++ +EL VE G ++ HLKS + Sbjct: 120 DDAPRFDGVFRIDLDVDATEDRVQFSKPPMELTVETAKGTAFRLIGAHLKSKAPHGAKSR 179 Query: 176 TYS-----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK---- 226 + QA WL + E+ P ++ GD N F + Sbjct: 180 DELIRLSIANRRKQLAQAIWLSRRVEALVEAKEPVILLGDLNDGPGLDEFEHLFGRSSVE 239 Query: 227 -TIDPNDSLIRFPKEKDSRCNANKNLRNKIP----------IDYFVMDQNAYKFLIQESF 275 + + R + +DY ++ + Sbjct: 240 ILLQAGLYDPHAAQAHGPRPGSVPATARFARPDEGRYLEALLDYIMISTDLRDRHPNWRI 299 Query: 276 SEILYNEDDIKSRGKR-----LSDHCPISIDYD 303 + D + R SDH P+++D D Sbjct: 300 WHPFRDTDCWGNPELREALLTASDHFPVTLDID 332 >gi|160884059|ref|ZP_02065062.1| hypothetical protein BACOVA_02035 [Bacteroides ovatus ATCC 8483] gi|237717295|ref|ZP_04547776.1| conserved hypothetical protein [Bacteroides sp. D1] gi|260173235|ref|ZP_05759647.1| hypothetical protein BacD2_15295 [Bacteroides sp. D2] gi|262406061|ref|ZP_06082611.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294648127|ref|ZP_06725670.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294806852|ref|ZP_06765677.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|315921508|ref|ZP_07917748.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156110401|gb|EDO12146.1| hypothetical protein BACOVA_02035 [Bacteroides ovatus ATCC 8483] gi|229443278|gb|EEO49069.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262356936|gb|EEZ06026.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292636511|gb|EFF54986.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294445881|gb|EFG14523.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|295085506|emb|CBK67029.1| Metal-dependent hydrolase [Bacteroides xylanisolvens XB1A] gi|313695383|gb|EFS32218.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 257 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 43/301 (14%), Positives = 88/301 (29%), Gaps = 51/301 (16%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 K ++ + F ++ AQ ++++S+N E G S+ + + + Sbjct: 6 KPIVWVCLFFFAYQSTYAQALKIMSYNCRMSGEMTGYSVKEY------------AVFIRK 53 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 + D+V LQE+ K T + D+ + +A+ K V Sbjct: 54 YNPDVVMLQEIDYNTKRNKNQDFTTQLAAELGLFSVFGKAMDTGGGEY-GVAILSKYPFV 112 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + R + + ++ G V+ I L + Sbjct: 113 ---YINNKTFEGIDGAKEPRTLLYVDIQEPGTS-DVIRIGTTHLDHSTDL---------I 159 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 S A+ + + I P ++ GDFN + + + + Sbjct: 160 RSAMAEQINERIGT---GDTPTLLGGDFNARTDSNVICEVMKNW-----------QRICD 205 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + I IDY + SF + +SDH + + + Sbjct: 206 DTFTYPADQPTIKIDYIFGLPQNKWKVK--SFKVLS---------NPEVSDHRALFAEVE 254 Query: 304 F 304 F Sbjct: 255 F 255 >gi|126735878|ref|ZP_01751622.1| exodeoxyribonuclease III [Roseobacter sp. CCS2] gi|126714435|gb|EBA11302.1| exodeoxyribonuclease III [Roseobacter sp. CCS2] Length = 266 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 81/303 (26%), Gaps = 63/303 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + L + D+ LQE+ S V + Sbjct: 1 MKIATFNING----------------VKARIGALTDWIDEAQPDVAVLQEIKS---VDEG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + ++ +A+ K + Sbjct: 42 FPREVF-------EDKGYNVETHGQKGFNGVAILSKLPLEDVTRGLPGAEGAGREGVDDE 94 Query: 144 RAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 A + + G K + + ++L + + Y + + L Q Sbjct: 95 EARYIEATVVGEKAVRICGLYLPNGNPAPGPKYDYK------LRWMERLHARAQQLMAHE 148 Query: 203 VPFVIAGDFNRKIN-------YLGNNDDFWKTIDPNDS-------LIRFPKEKDSRCNAN 248 ++ GD+N +D ++ + + +++ Sbjct: 149 EVALMCGDYNIIPQAEDAARPDAWRDDALFRQDSRDAYRRILNLGFTEAFRAREAGAGHY 208 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+F++ L + ++ SDH P+ Sbjct: 209 SFWDYQAGAWDKNDGIRIDHFLLTPQCADLLNTCWIESDV-------RGREKPSDHVPVW 261 Query: 300 IDY 302 +D Sbjct: 262 VDL 264 >gi|170733178|ref|YP_001765125.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia MC0-3] gi|169816420|gb|ACA91003.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia MC0-3] Length = 284 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 38/307 (12%), Positives = 81/307 (26%), Gaps = 52/307 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 +RL+ WNI + +G D + L D D++ LQE+ Sbjct: 1 MRLIDWNIQWGRDADGG-----------VDLPRTVAAIRRLGDFDVLCLQELTRGFDALP 49 Query: 75 --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + ++ R A+ + L Sbjct: 50 GRPGPDQFTELAALLPGYTIVDAIGADLPPIRPDAPRRQFGNAIATRLPVGRVLRQLLPW 109 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 D+ + + R A+++ ++ + V+ HL+ + + ++A Sbjct: 110 PADAGTPSMPRVALDIELQAPFGSLRVVTTHLEYYSARQ--RLAQVDALRDRHREACAHA 167 Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 D + PF ++ GDFN + D + + Sbjct: 168 DQPAPAETPEGPFSATGQPRDAIVCGDFNSAFDSDAYRRFVEPIADAPSFVDAWIARHPG 227 Query: 244 RC--------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + + D+ + +I R SDH Sbjct: 228 HTPPPTAGIYDTAQWSDGPLACDFVFVTDTLLPRVIGCEI-----------DGDVRASDH 276 Query: 296 CPISIDY 302 P+ ++ Sbjct: 277 QPVLLEL 283 >gi|45185974|ref|NP_983690.1| ACR288Wp [Ashbya gossypii ATCC 10895] gi|74694735|sp|Q75BI3|CCR4_ASHGO RecName: Full=Glucose-repressible alcohol dehydrogenase transcriptional effector; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase gi|44981764|gb|AAS51514.1| ACR288Wp [Ashbya gossypii ATCC 10895] Length = 736 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 86/325 (26%), Gaps = 42/325 (12%) Query: 22 QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + L+S+N + + + L+ DI+ LQE+ S Sbjct: 396 KSFTLLSYNTLCQHYATPKMYRFVPSWALSWDYRREKLKDEVLAYQTDIICLQEVESKTY 455 Query: 80 VAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 P + ++ R +D+ I + + + + Sbjct: 456 EEFWLPILEKQGYSGIFHAKTRARTMQSKDAKKVDGCCIFYKNSEFTAVFKDAIDFSSVW 515 Query: 136 SFSRAGNR---------------RAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSP 179 + R ++L E G+ +WV+ HL F D + Sbjct: 516 MKHKKFQRTEDYLNRAMNKDNVALIIKLRHERTGEHVWVVTTHLHWDPHFNDVKTFQVAV 575 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL-----------GNNDDFWKTI 228 + + + + + + +P VI GDFN +++ + D + Sbjct: 576 MLDYIEKLLKQHGGVGSPQDKKKIPLVICGDFNSQLDSAVVELFNTGSVRSHKDIEGRDF 635 Query: 229 DPNDSLIRFPKEKDSRCNANK--------NLRNKIPIDYFVMD-QNAYKFLIQESFSEIL 279 + + IDY Q + Sbjct: 636 GYMSQKNFAHGLALKSSYGSIGELPFTNLSPTFTDVIDYIWYSTQALRVRGLLGEIDPAY 695 Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304 + K SDH P+ ++F Sbjct: 696 AAKFIGLPNDKIPSDHIPLLARFEF 720 >gi|325919446|ref|ZP_08181471.1| putative extracellular nuclease [Xanthomonas gardneri ATCC 19865] gi|325550066|gb|EGD20895.1| putative extracellular nuclease [Xanthomonas gardneri ATCC 19865] Length = 1110 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 39/340 (11%), Positives = 95/340 (27%), Gaps = 54/340 (15%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69 P A V + ++N+ + + + +N DI+ Sbjct: 493 PAPLPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNSLHTPDIL 552 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK-----KN 120 E+ + + + + + + ++ + + I V+ Sbjct: 553 GTVEVENISVLQTLAARINADAVAGGQPDPHYVAYLQEGNDVGGIDVGFLVKTGAVSAGV 612 Query: 121 VRVLQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGK-----KIWVLDIHLKSFC 168 RV S G +++ R + L +++ + + +H +S Sbjct: 613 PRVEVVSIAQEGKTTTWTEPAGGVSLLNDRPPLVLTAKVHQADGRVLPLTAIVVHQRSLN 672 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 ++ + + + QA++L + Q+ + ++ GDFN G D Sbjct: 673 GAETDDAAGTRIRAKRQAQAEYLARLLQTRQQLDPAEQVLVMGDFNAFEFNDGYVDAMGT 732 Query: 227 T------------------IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 + D + + N +D+ + ++ + Sbjct: 733 VTGRPAPDAQTVVSGDGVDLVNPDYTDLTWFNTPDQSYSYAFDGNVQSLDHIIANEALMR 792 Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300 S S + + RLSDH P + Sbjct: 793 APNIASLSVGHASINADFPGTARNDANTPTRLSDHDPTVV 832 >gi|317048409|ref|YP_004116057.1| exodeoxyribonuclease III [Pantoea sp. At-9b] gi|316950026|gb|ADU69501.1| exodeoxyribonuclease III [Pantoea sp. At-9b] Length = 268 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 78/310 (25%), Gaps = 75/310 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLEALVEQHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + H +A+ K V +D+ R Sbjct: 42 FP-------LEEVSKLGYHVFYHGQKGHYGVALLTKAEPVAVHRGFPSDGEDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + I V++ F + + Q L+ ++ + Sbjct: 90 RLIMAEIPSPIGDITVIN-----GYFPQGESRDHPIKFPAKEKFYQDLQSYLQTQLAVDK 144 Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 P +I GD N + + ++ + + + Sbjct: 145 PVLIMGDMNISSTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLLN-WGLVDTWRAQY 203 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID + Q I D ++ Sbjct: 204 PETADRFSWFDYRSKGFDDNRGLRIDLLLASQPLASRCIASGI-------DYDIRSMEKP 256 Query: 293 SDHCPISIDY 302 SDH P+ + Sbjct: 257 SDHAPVWSTF 266 >gi|257052454|ref|YP_003130287.1| Endonuclease/exonuclease/phosphatase [Halorhabdus utahensis DSM 12940] gi|256691217|gb|ACV11554.1| Endonuclease/exonuclease/phosphatase [Halorhabdus utahensis DSM 12940] Length = 260 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 34/281 (12%), Positives = 64/281 (22%), Gaps = 31/281 (11%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 +++N+ + ++G R + + + D+V LQE + Sbjct: 1 MTYNVRYDNPEDGE-------HRWANRREAVSSTIRFHAPDVVGLQEPLDHQLADVADRL 53 Query: 87 NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146 ++ S + T P + R Sbjct: 54 PSFEWIGSGRVDGESEGEHTPIGYRTDRIEYVDGDTFWLSEAPEEPGSVGWDARYPRIVT 113 Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206 + +L + F S LL P V Sbjct: 114 WARLRDRRTDATLLFANTH---FSHDGPRARRKSAHLLLD--------RLADLRDDEPVV 162 Query: 207 IAGDFNRKINYLGN-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 + GDFN D + + +NL ID+ Sbjct: 163 LTGDFNCVAGEEPYEILTGEDSPLALSGEQERSAEPAHGPPTSVTDFENLVPNRKIDHVF 222 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + D+ G+ SDH P+ ++ Sbjct: 223 TTPDVTVGTHGV--------CSDVYDDGRFPSDHLPVLVEL 255 >gi|226195815|ref|ZP_03791402.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei Pakistan 9] gi|225932300|gb|EEH28300.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei Pakistan 9] Length = 648 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 88/288 (30%), Gaps = 30/288 (10%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ N + + + R +Y + K LDAD++ L E+ Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYDEFVRQDAKIVSALKALDADVIGLMEIE 353 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + + S R + I A+ + V+ P+ A Sbjct: 354 NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVK------PIGNAA 407 Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186 NR+ + + + V HLKS D+ + + S+ Sbjct: 408 TLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSR 467 Query: 187 QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A + DW+ + ++ GD N +T++ + + S Sbjct: 468 AAAKIADWLARNPTGTPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKVGSG 522 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + +D+ + + I D + R+ Sbjct: 523 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINAGRADRPAIHARI 570 >gi|24372651|ref|NP_716693.1| extracellular nuclease [Shewanella oneidensis MR-1] gi|24346694|gb|AAN54138.1|AE015551_2 extracellular nuclease [Shewanella oneidensis MR-1] Length = 871 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 46/378 (12%), Positives = 102/378 (26%), Gaps = 88/378 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQ----EGVSLWKNSVKRTTS----DYTLLRQYAKNLDA 66 + + +R+ S+N+ + N T T + ++A Sbjct: 455 APSVATKGDIRVASFNVLNFFNDVVGGDTNPSGGNRGALTEEEMLLQRTKIVSAITAMNA 514 Query: 67 DIVFLQEMGSY-----NAVAKVFP--------KNTWCIFYSTERLINHSKRDSNNDIHTA 113 DIV L E+ + +A+ + +N + + K ++ I Sbjct: 515 DIVGLMEIANNGFGEKSAIKNLVDALNEKQTTENAYSYIQIADTDKYDGKYFGSDAITVG 574 Query: 114 IAVRKKNVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155 + R V + + + + + A R ++ +I+ + Sbjct: 575 MLYRAGKVSLAGAARTIETPEQHASVGSVTRIKDGKTETNPGNDAYQRHSLAQTFKIHDQ 634 Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES--- 201 + V+ HLKS + A+ L + + K Sbjct: 635 NLTVVVNHLKSKNSGCLEDWVNFEESVDPADLQGRCNEFRVSAAKVLGEALKDVKGDLLV 694 Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPK 239 P + DF+ + W T++ + K Sbjct: 695 IGDMNAYGMEDPLRVLTDFDASKSDRDIMTASWTTLNGKVYERQGSKIDKGYGLINLNTK 754 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291 + + +D+ + + + K L+ I E + GK+ Sbjct: 755 AHGTGTYSYSYNGELGNLDHALANTSLAKRLVDIEDWHINSVESSLFEFGKKFSGNLVKS 814 Query: 292 -----LSDHCPISIDYDF 304 SDH P+ + + Sbjct: 815 ENAFSASDHDPVIVALSY 832 >gi|317486298|ref|ZP_07945130.1| exodeoxyribonuclease III [Bilophila wadsworthia 3_1_6] gi|316922468|gb|EFV43722.1| exodeoxyribonuclease III [Bilophila wadsworthia 3_1_6] Length = 263 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 78/305 (25%), Gaps = 70/305 (22%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +RLVSWN+N G W + + DAD+V LQE Sbjct: 2 DTIRLVSWNVNGFRALSGKPDW---------------DWFASTDADVVALQE-------T 39 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K P S E ++ +AV + L+ D + Sbjct: 40 KAEPSQIAEEHRSPEGWNAEWLAAQVKKGYSGVAVFSRQKAALEPLAVHRELPDPRYQGE 99 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + I +++ + D A+ L+ Sbjct: 100 GRL-----LHIEYPAFHFFNVYFPNGTKDDGRLAYKMGYYDAFLAHAEELRR-------- 146 Query: 202 LVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P V+ GDFN +L + + F + Sbjct: 147 TKPIVVCGDFNTAHRPIDLARPKANEENSGFLPIERAWVDRFIAAGYVDTFRHIHGDEPH 206 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 K IDYF + + + +Y SDHCP Sbjct: 207 QYSWWSYKQRARVNNVGWRIDYFFVSEELAPAIRDAWIENNVY-----------GSDHCP 255 Query: 298 ISIDY 302 + ++ Sbjct: 256 VGLEL 260 >gi|322514720|ref|ZP_08067746.1| exodeoxyribonuclease III [Actinobacillus ureae ATCC 25976] gi|322119315|gb|EFX91431.1| exodeoxyribonuclease III [Actinobacillus ureae ATCC 25976] Length = 305 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 79/311 (25%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + D++ LQE + + Sbjct: 39 MKFISFNINGL----------------RARPHQLEALIEKHQPDVIGLQEIKVADEDFPW 82 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +F+ H +A+ K + + D+ R Sbjct: 83 DLVNHLGYHVFHH------------GQKGHYGVALLTKKEPLAVRKGFPTDDADAQKR-- 128 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +E + VL+ F + + L+ ++ + Sbjct: 129 ---MIMADIETEFGVLTVLN-----GYFPQGENRAHETKFPAKEKFYADLQHYLETELTP 180 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 P VI GD N L ++ + + F Sbjct: 181 ENPIVIMGDMNISPTDLDIGIGEPNRKRWLRDGKCSFLPEEREWLDRLYNYGLVDTFRVM 240 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + + ++ D ++ Sbjct: 241 NPQANDKFSWFDYRSKGFDDNRGLRIDLVLASKGLAGHCVETGI-------DLEIRAMEK 293 Query: 292 LSDHCPISIDY 302 SDH P+ + Sbjct: 294 PSDHAPVWAVF 304 >gi|302546317|ref|ZP_07298659.1| endonuclease/exonuclease/phosphatase [Streptomyces hygroscopicus ATCC 53653] gi|302463935|gb|EFL27028.1| endonuclease/exonuclease/phosphatase [Streptomyces himastatinicus ATCC 53653] Length = 636 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 37/321 (11%), Positives = 75/321 (23%), Gaps = 65/321 (20%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + ++ + ++N+ LS + S + + DIV L+E+ N Sbjct: 330 SGELSVATYNVENLSPKTAQSKFDRLASGLVDNLA---------SPDIVALEEVQDDNGA 380 Query: 81 -----------------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 A + + +I A K V Sbjct: 381 TNDGVVSADATLKKLTDAIAAAGGPSYSWRQINPADDQDGGQPGGNIRVAFLYNPKRVSF 440 Query: 124 LQ---------------------QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 + P S +R+ + G+ ++V+ Sbjct: 441 TDIPGGDATTPVKVVQDGGKAALSASPGRIEPGSDVWKDSRKPLVGQFAFRGRPVFVVAN 500 Query: 163 HLKSFCFLDSLENT----YSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKIN 216 H S L+ S + + QA + ++ + V+AGD N Sbjct: 501 HFNSKGGDQGLDARVQPPARSSETQRTGQATAVNTFVKSLLAADPKAAVVVAGDLNDYQF 560 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 + + N +D+ + + Sbjct: 561 SP----ALSALTKGGVLTDLVTRFPRNERYGYVYNGNSQVLDHILTSRALRG-------- 608 Query: 277 EILYNEDDIKSRGKRLSDHCP 297 + SDH P Sbjct: 609 PDYDIVHLNAEFADQSSDHDP 629 >gi|158424436|ref|YP_001525728.1| exodeoxyribonuclease III [Azorhizobium caulinodans ORS 571] gi|158331325|dbj|BAF88810.1| exodeoxyribonuclease III [Azorhizobium caulinodans ORS 571] Length = 262 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 83/302 (27%), Gaps = 67/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + K D+V LQE+ Sbjct: 1 MRIATWNVN----------------SVRLRTEHAVAWLKEAQPDVVCLQEIKCQTE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ +A+ K + D +R Sbjct: 41 ------QFPREPFEALGYNVAVHGQKGFNGVAILSKRPLEDVTNGLAGDDSDVQARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E +V + G + V I+L + + + Y LK + + + Sbjct: 92 --IEAVVSVPGGVVRVCCIYLPNGNPPQTEKYDYKLGFMAR------LKAFTESRLKLEE 143 Query: 204 PFVIAGDFN----------------RKINYLGNNDDFWKTIDPN-DSLIRFPKEKDSRCN 246 P ++AGDFN + F + I+ +R + + Sbjct: 144 PLILAGDFNVIPDARDAADPAAWVEDALYLPRTRAAFREIINLGMTDALRATSDAERLFT 203 Query: 247 ANKN------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 I ID+ ++ A LI D +R SDH P I Sbjct: 204 FWDYQAGAWQRDFGIRIDHLLLSPQAADRLIGAGI-------DKHLRALERPSDHVPAWI 256 Query: 301 DY 302 D Sbjct: 257 DL 258 >gi|187924588|ref|YP_001896230.1| exodeoxyribonuclease III Xth [Burkholderia phytofirmans PsJN] gi|187715782|gb|ACD17006.1| exodeoxyribonuclease III Xth [Burkholderia phytofirmans PsJN] Length = 258 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 28/302 (9%), Positives = 82/302 (27%), Gaps = 68/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + + + D++ LQE Sbjct: 1 MKIATWNVNSL----------------KVRQQHVIDWLETSGTDVLCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + + + + + + F R Sbjct: 35 LKLPDEKFPRAELEEKGYRSWFAGQKTYNGVGILVRGGLTVDEGSIVRNIP-GFEDPQQR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E + ++ + + + + Y + L DWI + Sbjct: 94 -VIAATIE----GVRIISAYFPNGQAPGTDKFAYK------LRWLAALHDWIASEMALHP 142 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANK 249 + GD+N + +D + + + L+ ++ + Sbjct: 143 KLALLGDYNIAPDDRDVHDPKAWEGQNLVSPEERAAFVRLIELGLLDAFRQFEQPEKIYS 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ + + D + + + SDH P+ Sbjct: 203 WWDYRMMAFRRNAGLRIDHILLSKALADVCSSC-------DVDKVPRKWDQPSDHAPVVA 255 Query: 301 DY 302 Sbjct: 256 QL 257 >gi|83312933|ref|YP_423197.1| hypothetical protein amb3834 [Magnetospirillum magneticum AMB-1] gi|82947774|dbj|BAE52638.1| hypothetical protein [Magnetospirillum magneticum AMB-1] Length = 330 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 33/333 (9%), Positives = 101/333 (30%), Gaps = 61/333 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---- 78 +R+ ++N+ L E+ + + L+R + L AD++ LQE+ +++ Sbjct: 3 PLRIATFNLENLDERPAGGIDFD------DRVALMRPQFQRLRADVLCLQEVNTHSVTKS 56 Query: 79 ------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-- 130 A+ ++ + R+ + ++ + + + K + Sbjct: 57 GPRLFTALDRLLAGTEYE---HWHRVHSLNRGGVHPSDKHNLVIISKMPIRAHRQVWHDL 113 Query: 131 ------------LGAKDSFSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTY 177 + +R + + G+ + V+++HL++ + Sbjct: 114 VPPCAYRPVRANPAPDEPQRVEWDRPILHAELGLPGGRSLHVINVHLRAPRAVWLQGQKE 173 Query: 178 S---------------PSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGN 220 + + QA ++ + + V+ GDFN + G Sbjct: 174 RFGRWLSVGGWAEGYFLAGVKQAGQALEVRLLVEEIFDARPDALVVVCGDFNAGEHEAGM 233 Query: 221 N-------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273 D + + + + + + + +D+ ++ + + + Sbjct: 234 RIIKGDDEDTGNGHLAMRMLVPLERSLPEGQRYSVIHHGRPVMLDHILVSRPLLGWYLGA 293 Query: 274 SFSEILYNEDDIKSRGKRL---SDHCPISIDYD 303 ++ + S H P+ ++ Sbjct: 294 EIHNETLGDELVSPATIHAPPESYHAPVVAEFS 326 >gi|60682549|ref|YP_212693.1| hypothetical protein BF3080 [Bacteroides fragilis NCTC 9343] gi|60493983|emb|CAH08775.1| putative conserved exported protein [Bacteroides fragilis NCTC 9343] Length = 344 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 41/326 (12%), Positives = 84/326 (25%), Gaps = 56/326 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67 R+V WN + SL + + +R + + + Sbjct: 24 PFRVVFWNTENFFDTRHDSLKNDMEFLPHSMRHWNHRRYKKKLDNVARTLTAIGEWNFPA 83 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 ++ L E+ + + + + + I+ A+ ++ ++L Sbjct: 84 LIGLCEVENDTVMRDL---TLYSPLKEAGYRYVMTHCSDLRGINVALLYQRDRFKLLS-- 138 Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y L + R + + + + G + ++ HL S S Sbjct: 139 YSALSVGNFKGHRPTRDILHVSGLLLTGDTLDIMVAHLPSRSGGV------RQSEPYRLY 192 Query: 187 QAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKT------IDPNDSLIRFP 238 AQ LKD +I GDFN + Sbjct: 193 AAQKLKDAADSLINVRPSTKLIIMGDFNDYPTDKSVVQVLQALSPEVSTHHDRLYHLLAR 252 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI-------------------- 278 K KD + K +D+ ++ E Sbjct: 253 KAKDRNFGSYKYQGEWGLLDHLIVSGTLLDVSGTLFTEEKKANVACLPFLLTKDEKYGGM 312 Query: 279 -LYNEDDIKSRGKRLSDHCPISIDYD 303 + + SDH P+ +D++ Sbjct: 313 QPFRTYVGMKYQEGYSDHLPVYVDFE 338 >gi|253569415|ref|ZP_04846825.1| metallophosphoesterase [Bacteroides sp. 1_1_6] gi|251841434|gb|EES69515.1| metallophosphoesterase [Bacteroides sp. 1_1_6] Length = 611 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 83/304 (27%), Gaps = 63/304 (20%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K L + L+ +RL+++NI + +GV D+ + Sbjct: 4 MKKIFLLISAILLIVPVQAQHTLRLMTYNIKNATGMDGVC-----------DFQRIANVI 52 Query: 62 KNLDADIVFLQEMG---SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N D+V +QE+ + + V + + I + Sbjct: 53 NNASPDVVAVQEVDSVTNRSNQKYVLGEIAERTQMYACFAPAID----YDGGKYGIGLLS 108 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K V Q+ L G R R + E HL Sbjct: 109 KKAPVHLQTIALPG------REEARALILAEFE----DYIYCCTHLSLTEED-------- 150 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + LK + K+ P +AGD N + + F Sbjct: 151 -----RMKSLEILKTFAASYKK---PLFLAGDMNAEPESDFIK----------ELQKEFR 192 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + K IDY + K S + SDH PI Sbjct: 193 ILSNPKQHTFPAPVPKETIDYVAAFKQNDKGFAVVSSEVVNEPV---------ASDHRPI 243 Query: 299 SIDY 302 ++ Sbjct: 244 VVEL 247 >gi|302382164|ref|YP_003817987.1| exodeoxyribonuclease III Xth [Brevundimonas subvibrioides ATCC 15264] gi|302192792|gb|ADL00364.1| exodeoxyribonuclease III Xth [Brevundimonas subvibrioides ATCC 15264] Length = 264 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 81/306 (26%), Gaps = 70/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WNIN + ++ D++ LQE+ + Sbjct: 2 LRVATWNIN----------------SVRLRIDQVARFVAESGTDVLCLQEI---KCLEDQ 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+N + + + + +A+ + +++ Sbjct: 43 FPRNAFA------DMGLPHLKIAGQKGWHGVAIASRRPIEPSETFQSCKLGH-------- 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + V++ G I + D + +P + L + + + Sbjct: 89 -ARCVSVQVAGVDIQ----NFYIPAGGDVPDRELNPKFDHKMDFYEQLTATVAAQ-DRSR 142 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GDFN + + + + Sbjct: 143 PLLMCGDFNIAPSEFDVWNHRYMSKIVSHTPIEVETLNRLQVAGAFTDVVREAFPEPQKL 202 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ ++ S + + SDHCP Sbjct: 203 ASWWSYRAEDFRKSARGLRLDHIWTSPGLTPAVVAGSA-----TIHEPVRAWTQPSDHCP 257 Query: 298 ISIDYD 303 I++D D Sbjct: 258 ITVDLD 263 >gi|311895360|dbj|BAJ27768.1| hypothetical protein KSE_19440 [Kitasatospora setae KM-6054] Length = 809 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 42/328 (12%), Positives = 84/328 (25%), Gaps = 69/328 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ--YAKNLDADIVFLQEMGSYNA 79 ++ + ++N+ L +G + L Q DIV L+E+ N Sbjct: 502 NELTIGTYNVENLDPGDG-----------PEKFARLAQGVVTNLASPDIVALEEIQDDNG 550 Query: 80 VA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIH---------- 111 K + S + + +I Sbjct: 551 AVNDGTVGAATTVRTFVDAIKAAGGPAYDW-RSIDPEDGKDGGEPGGNIRQVFLFDPARV 609 Query: 112 -----------TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 TA+ V KN + + P + + +R+ + E GK ++V+ Sbjct: 610 SFTDIPGGTATTAVDVTGKNHKTSLTASPGRIDPGNEAWTSSRKPLVGQFEFKGKPVFVI 669 Query: 161 DIHLKSFCFLDSLENT----YSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRK 214 H S +++ S +QA + ++ + + V GDFN Sbjct: 670 ANHFNSKGGDQGIDSRFQAPTRSSEVQRVKQATVEQAFVAKLLAADPKARIVSLGDFNDY 729 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 + + N +D+ ++ Sbjct: 730 QFSP----ALQTLTKDGVLRDLVNELPAEERYSYVYQGNSQVLDHILVSPALKPEKTHYD 785 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302 I + SDH P + Sbjct: 786 VVHIN------SEFAAQASDHDPQVVRI 807 >gi|187478127|ref|YP_786151.1| exodeoxyribonuclease III [Bordetella avium 197N] gi|115422713|emb|CAJ49240.1| exodeoxyribonuclease III [Bordetella avium 197N] Length = 261 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 34/302 (11%), Positives = 77/302 (25%), Gaps = 72/302 (23%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L +WN+N+L + + D + LQE+ + Sbjct: 3 LATWNVNSL----------------KVRLPQVIDWLNANPVDALCLQELKLADD------ 40 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 I + + + +A+ + + L + R Sbjct: 41 ----KFPLEAFTEIGYHAAWAGQKTYNGVAILSREP-----GFALTRNIPGYEDPQQR-V 90 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + + + + V+ + + LDS + Y + L+ W+ ++ + Sbjct: 91 IAVTLPSPAGDVRVISAYCPNGQSLDSDKYPYK------LEWFGALRHWLEEELRTYPRL 144 Query: 206 VIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 I GD+N F +D L + + Sbjct: 145 AILGDYNVAPADEDVHNPEKWEGQVLVSAPERQAFQALLDLG--LTDAFRLFAQPEKSFS 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ + D ++ SDH P+ Sbjct: 203 WWDYRMFGFRRNAGLRIDHILLSDALKPTCVACII-------DKGPRGNEQPSDHTPVVT 255 Query: 301 DY 302 Sbjct: 256 TL 257 >gi|297563086|ref|YP_003682060.1| exodeoxyribonuclease III Xth [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847534|gb|ADH69554.1| exodeoxyribonuclease III Xth [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 275 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 32/306 (10%), Positives = 73/306 (23%), Gaps = 70/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + + D D++ +QE + + Sbjct: 1 MRIATWNVN----------------SARARAERIGAWLDRSDVDVLAIQETKARDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + +A+ + + +G Sbjct: 41 ------QFPASVLTDRGYEVAHHGLSQWNGVAIASRVGLEDVR----IGFPGQPGYGDPE 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KES 201 A + + V +++ + +D Y + + L++ + Sbjct: 91 EAEARAIGATCGGVQVWSLYVPNGREVDHPHYAYK------LRWLEALREAGAASLAADP 144 Query: 202 LVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 GDFN + + + Sbjct: 145 GAQIAYVGDFNIAPRDEDVWDMAAFEGSTHVTEPERVAFDKLVGAGFDEVVRAYTPGP-G 203 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 K + ID+ + + S D + +GK SDH P Sbjct: 204 VYTYWDYKGLAFPKRRGMRIDFVLASPALRDRVSGASI-------DREERKGKGASDHAP 256 Query: 298 ISIDYD 303 + + D Sbjct: 257 VIVGLD 262 >gi|166363474|ref|YP_001655747.1| exodeoxyribonuclease III [Microcystis aeruginosa NIES-843] gi|166085847|dbj|BAG00555.1| exodeoxyribonuclease III [Microcystis aeruginosa NIES-843] Length = 266 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 37/308 (12%), Positives = 94/308 (30%), Gaps = 73/308 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ +WN+N S + + + +++ LQE + + Sbjct: 1 MKIATWNVN----------------SIRSRQEQVINWLQLNPVEVLCLQETKVIDRDFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR--VLQQSYPLLGAKDSFSR 139 + F + ++ S + +A+ + + P++G + Sbjct: 45 EAFESLGYHLYIS------------GQKSYNGVAIFSRKPLDDITVGFSPIIGENLTGEL 92 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 +R + ++ I ++++++ + LDS + Y + + L+ ++ + Sbjct: 93 DEQKRVITGVI----GDIRIINLYVPNGSSLDSDKYIYK------LKWLETLRKYLDKII 142 Query: 200 ES-LVPFVIAGDFNRKINYLGNNDDFWKTID--------------PNDSLIRFPKEKDSR 244 S I GDFN + D K L ++ S Sbjct: 143 NSQPEELCICGDFNIALEDKDIYDPKGKENHIMSSAKEREALEKVLEIGLQDAFRKFTSA 202 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + ID+ + Y+ + D + ++ SDH Sbjct: 203 AGHYSWWDYRSGGFARNRGWRIDHLYLTPQLYEKAVNCLI-------DREPRKQEKPSDH 255 Query: 296 CPISIDYD 303 P+ ++ Sbjct: 256 TPVILEIS 263 >gi|256061437|ref|ZP_05451581.1| Endonuclease/exonuclease/phosphatase family protein [Brucella neotomae 5K33] gi|261325444|ref|ZP_05964641.1| endonuclease/exonuclease/phosphatase [Brucella neotomae 5K33] gi|261301424|gb|EEY04921.1| endonuclease/exonuclease/phosphatase [Brucella neotomae 5K33] Length = 369 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 44/366 (12%), Positives = 99/366 (27%), Gaps = 86/366 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKN----------------SVKRTTSDYTLLRQY------- 60 + ++N+ L + S ++N + R + Sbjct: 2 FTIATFNVENLMRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMT 61 Query: 61 ---AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 ADI+ LQE+ + A+ + + R + + I A+ +R Sbjct: 62 ALAIAETRADILCLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121 Query: 118 ------KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKI 157 + S+ L D R R + + + I G+ + Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 181 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNR 213 + HLKS + ++ + S + +A+ ++ I +K + ++I GDFN Sbjct: 182 SLFVAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 241 Query: 214 KINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP 256 + + ++ + Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301 Query: 257 ----IDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 +DY + + + + ++SDHCP Sbjct: 302 HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKVSDHCP 361 Query: 298 ISIDYD 303 +S+ + Sbjct: 362 VSVTLN 367 >gi|53719925|ref|YP_108911.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei K96243] gi|167824992|ref|ZP_02456463.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 9] gi|226195468|ref|ZP_03791056.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pakistan 9] gi|52210339|emb|CAH36318.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei K96243] gi|225932428|gb|EEH28427.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pakistan 9] Length = 258 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 82/302 (27%), Gaps = 68/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+L+ + + D D++ LQE Sbjct: 1 MRIATWNVNSLN----------------VRKQHVLDWLAQSDVDVLCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + S P + G Sbjct: 35 LKIPDEKFPREALEAAGYRSWFAGQKTYNGVAILAR------ASLPFDETDIVRNIPGFE 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + L+ + ++ + + LDS + Y Q L+ W+ + + Sbjct: 89 DAQQRLIAATIDGVRIVSAYFPNGQALDSDKFVYK------MQWLDALRAWLKDELQRYP 142 Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249 + GD+N +D + P + + + Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLVALGFVDAFRRFEQPEKTFT 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ + + D + ++ SDH P+ Sbjct: 203 WWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTV-------DRVPRTWEQPSDHTPVVA 255 Query: 301 DY 302 Sbjct: 256 QL 257 >gi|83952174|ref|ZP_00960906.1| exodeoxyribonuclease III [Roseovarius nubinhibens ISM] gi|83837180|gb|EAP76477.1| exodeoxyribonuclease III [Roseovarius nubinhibens ISM] Length = 260 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 78/305 (25%), Gaps = 71/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +++ S+NIN + L + D+ LQE+ N Sbjct: 1 MKIASFNING----------------IKARIDALPAWLDEAQPDVAILQEIKSVDENFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++F + + + +A+ K D +R Sbjct: 45 EIFEERGYQV------------ETHGQKSFNGVAILSKLPLEDVTRGLPGDDADEQARY- 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E V + + + ++L + + Y + + L+ Sbjct: 92 ----IEATVIGDHSALRLCGLYLPNGNPAPGPKYDYKLA------WMERLQARAEALLAL 141 Query: 202 LVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCN 246 PF++AGD+N ++ I F + Sbjct: 142 EEPFLMAGDYNIIPQDEDAKRPEAWREDALALPQSRAAYRRIVNLGLTEAFRARTQGPGH 201 Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ID+F++ L D G + SDH PI Sbjct: 202 YTFWDYQAGAWNRDDGIRIDHFLLSPQCADRLTDCQI-------DKHVRGGDKPSDHVPI 254 Query: 299 SIDYD 303 I D Sbjct: 255 WITLD 259 >gi|184216050|gb|ACC77471.1| putative large secreted protein [Streptomyces rimosus] Length = 581 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 39/329 (11%), Positives = 84/329 (25%), Gaps = 71/329 (21%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYN 78 A ++ + ++N+ LS + + + L + D+V L+E+ N Sbjct: 275 ADELAVATYNVENLSPKTP-----------PAKFARLAEALVKNLASPDVVALEEVQDDN 323 Query: 79 ------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 K ++ + + N +I T Sbjct: 324 GPTNDGTVSADATLKQLTDAVKAAGGPSYAW-RQIDPVNNQDGGQPGGNIRTVFLFNPAR 382 Query: 121 VRVLQ---------------------QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 V + P + + A +R+ + G+ ++V Sbjct: 383 VSFTDVAGGDATTPVKVTGSPGKPRLSASPGRIDPGNAAWANSRKPLVGQFCFRGRPVFV 442 Query: 160 LDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGDFNR 213 + H S L++ + P QQAQ + ++ + + V+AGD N Sbjct: 443 VANHFNSKGGDQGLDSRFQPPARTSETQRVQQAQAVHAFVEDVLRVDPKADVVVAGDLND 502 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273 + N +D+ + ++ Sbjct: 503 FQFSP----ALKTLTAGGVLTDLVDRLPRGERYGYVYQGNSQVLDHMLTSRHLR------ 552 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P + Sbjct: 553 --RVDYDIVHINAEYADQSSDHDPQVLRL 579 >gi|91784274|ref|YP_559480.1| exodeoxyribonuclease III [Burkholderia xenovorans LB400] gi|91688228|gb|ABE31428.1| Exodeoxyribonuclease III [Burkholderia xenovorans LB400] Length = 258 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 28/302 (9%), Positives = 82/302 (27%), Gaps = 68/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + + + D++ LQE Sbjct: 1 MKIATWNVNSL----------------KVRQQHVIDWLETSGTDVLCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + + + + +S + F R Sbjct: 35 LKLPDEKFPRAELEEKGYRSWFAGQKTYNGVGILVRGGLTVDESSIVRNIP-GFEDPQQR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ + ++ + + + + Y + L DWI + Sbjct: 94 -VIAATID----GVRIISAYFPNGQAPGTDKFAYK------LRWLAALHDWIASEMALHP 142 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANK 249 + GD+N +D + + + L+ ++ + Sbjct: 143 KLALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAAFVQLIGLGLVDAFRQFEQPEKIYS 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ + + D + + + SDH P+ Sbjct: 203 WWDYRMMAFRRNAGLRIDHILLSKALAEICSSCEV-------DKVPRKWDQPSDHAPVVA 255 Query: 301 DY 302 Sbjct: 256 QL 257 >gi|291448720|ref|ZP_06588110.1| large secreted protein [Streptomyces roseosporus NRRL 15998] gi|291351667|gb|EFE78571.1| large secreted protein [Streptomyces roseosporus NRRL 15998] Length = 645 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 42/327 (12%), Positives = 77/327 (23%), Gaps = 69/327 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ--YAKNLDADIVFLQEMGSYNA 79 ++ + ++N+ L + + + L + DIV L+E+ N Sbjct: 334 DELAVATYNVENLDAGDD-----------QAKFDTLAEGVAVNLSSPDIVSLEEIQDDNG 382 Query: 80 V-----------------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 A V + N + +I K V Sbjct: 383 AVNDGTTGSEATLKRFTDAVVAKGGPRYAWRYIAPENNKDGGEPGGNIRNVFLYNPKRVS 442 Query: 123 VLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 + P +S + A +R+ + GK ++V+ Sbjct: 443 FTDRPGGDATTPVRAVDTWLGVKLSASPGRINPESPAWADSRKPLVGEFVFRGKPVFVIG 502 Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215 H S L Y S + QQA + ++ K + V GDFN Sbjct: 503 NHFASKGGDQPLHGRYQEPTRSSETKRIQQAAEVNTFVASLLKADKSAQVVALGDFNDFE 562 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + N +D+ + Sbjct: 563 FSPT----MKALTKGKALKPLISTLPVGERYSYVFDGNSQTLDHILTSPGVR-------- 610 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P + Sbjct: 611 RLDYDVVHINAEFADQASDHDPQVVRI 637 >gi|239945254|ref|ZP_04697191.1| putative endonuclease/exonuclease/phosphatase family protein [Streptomyces roseosporus NRRL 15998] gi|239991716|ref|ZP_04712380.1| putative endonuclease/exonuclease/phosphatase family protein [Streptomyces roseosporus NRRL 11379] Length = 803 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 42/327 (12%), Positives = 77/327 (23%), Gaps = 69/327 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ--YAKNLDADIVFLQEMGSYNA 79 ++ + ++N+ L + + + L + DIV L+E+ N Sbjct: 492 DELAVATYNVENLDAGDD-----------QAKFDTLAEGVAVNLSSPDIVSLEEIQDDNG 540 Query: 80 V-----------------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 A V + N + +I K V Sbjct: 541 AVNDGTTGSEATLKRFTDAVVAKGGPRYAWRYIAPENNKDGGEPGGNIRNVFLYNPKRVS 600 Query: 123 VLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 + P +S + A +R+ + GK ++V+ Sbjct: 601 FTDRPGGDATTPVRAVDTWLGVKLSASPGRINPESPAWADSRKPLVGEFVFRGKPVFVIG 660 Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215 H S L Y S + QQA + ++ K + V GDFN Sbjct: 661 NHFASKGGDQPLHGRYQEPTRSSETKRIQQAAEVNTFVASLLKADKSAQVVALGDFNDFE 720 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + N +D+ + Sbjct: 721 FSPT----MKALTKGKALKPLISTLPVGERYSYVFDGNSQTLDHILTSPGVR-------- 768 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P + Sbjct: 769 RLDYDVVHINAEFADQASDHDPQVVRI 795 >gi|89055881|ref|YP_511332.1| endonuclease/exonuclease/phosphatase [Jannaschia sp. CCS1] gi|88865430|gb|ABD56307.1| Endonuclease/exonuclease/phosphatase [Jannaschia sp. CCS1] Length = 337 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 42/333 (12%), Positives = 94/333 (28%), Gaps = 53/333 (15%) Query: 23 KVRLVSWNINTLS----EQEGVSLWKNSVKRT----TSDYTLLRQYAKNLDADIVFLQEM 74 K+R ++N+ ++ + R T+ L + + +DAD V + E Sbjct: 4 KLRFATYNVEWFFKLFDDEGRLLRDDGWSGRWNVTRTAQIDALARVFRAMDADAVLVVEA 63 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS------- 127 + ++ R N + + +V + Sbjct: 64 PDTSRGRDGAVALRSFAAHAGLRAREVLAGFPNETQQELMLLYDPDVITARHDPLEAGAP 123 Query: 128 -------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY--S 178 L ++ +E +E + ++ H+KS ++ + Sbjct: 124 QFDAEFAIDLDIDATEDLVRFSKPPLEAALETPVGPLRLIGAHVKSKAPHGAVTDADVMR 183 Query: 179 PSCSLLSQQAQW---LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW---------- 225 + + +Q L+ + ++ ++AGD N F Sbjct: 184 IAIANRRKQLAQCIWLRRRVEAHLDAGDALIVAGDLNDGPGLDEYEALFGRSGLEIILGT 243 Query: 226 ------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-----IDYFVMDQNAYKFLIQES 274 + DP+ + K + A R++ +DY ++ + Sbjct: 244 AGVAERRLFDPHAAQALQSKLSATPTTARFFKRHENRYLQALLDYVMVSPALRLRADRWH 303 Query: 275 FSEILYNEDDIKSRGKR-----LSDHCPISIDY 302 + D R SDH P+S+D Sbjct: 304 IWHPFDDPDCWGQTDLREALLTASDHFPVSLDL 336 >gi|1185049|gb|AAB39273.1| nuclease [Aeromonas hydrophila] Length = 1070 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 39/367 (10%), Positives = 88/367 (23%), Gaps = 84/367 (22%) Query: 19 SVAQKVRLVSWNINTLSEQE-GVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVF 70 + A +R+ S+N+ G + R T + L+AD+V Sbjct: 472 AAAGDLRVASFNVLNFFTTVVGGDANPTNSNRGALTVGEFELQRTKIVSAITRLNADVVG 531 Query: 71 LQEMGSYN------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 L E+ A+ P + + I + R Sbjct: 532 LMEIEDNGYGNNSAIANLVGALNAALPDEQDHYAFVHSPDDQPMGT---DAITVGLIYRP 588 Query: 119 KNVRVLQQSYPLL-----------GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 V + + + K R G R ++ + + + Sbjct: 589 AKVSLEGAAQLIPLPLQVAEAVDGADKPVSIRQGMRDSLLQRFTSPKGDVPLTLVVNHLK 648 Query: 168 CFLDSLENTYSPSC------------SLLSQQAQWLKDWITQKKES------------LV 203 + Y +L A+ L + + Q+ Sbjct: 649 SKGSACYEDYPDYVTADPLDGQGHCNALRVSAAKVLGERLKQEPGDLLVIGDLNAYGLED 708 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTI-------------DPNDSLIRFPKEKDSRCNANKN 250 P + D++ + + + + + + Sbjct: 709 PVRVLTDYDPAAQSRQIMSAAFTQLAGQPYEEQATAMGKGAGLINLNTQFHGTDTYSYSY 768 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------------LSDHCP 297 +D+ + + + K ++ I E + GK+ SDH P Sbjct: 769 EGELGNLDHALANPSLAKKVVGIEDWHINSAESNFFEYGKKYSGQLGKSEGPFSASDHDP 828 Query: 298 ISIDYDF 304 + + + Sbjct: 829 VLVAIQY 835 >gi|72160551|ref|YP_288208.1| metal-dependent hydrolase [Thermobifida fusca YX] gi|71914283|gb|AAZ54185.1| similar to Metal-dependent hydrolase [Thermobifida fusca YX] Length = 673 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 44/292 (15%), Positives = 86/292 (29%), Gaps = 47/292 (16%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 F ++R+V++NI T D + + + D+V L Sbjct: 418 FSDTTRTPAGNELRVVAYNIRM-----------GYGLTGTYDIEGIAETIQRAQPDVVLL 466 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 E+ + + + +N AV + V YPL Sbjct: 467 NEVDRGWFLTGGQDTLGTLARMLDMQAVF----APSNGQLWGDAVLTRLPIVETVGYPLR 522 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 G + A+ ++V+ +I V+ HL+S + E + QA L Sbjct: 523 GYGSTTGAQ----ALAVVVKYETTEIEVIATHLQSPGTEEGEEPKEP------TLQAADL 572 Query: 192 KD-WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 D I ++ P ++ GDFN N W+ ++ + + S + Sbjct: 573 ADIIIKRRSAHGRPVIVGGDFNF-----ERNGAAWREMERAGLYDALFRVRPSPTFPADD 627 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D+ + + + SDH + Sbjct: 628 PDKE--LDHIFATAGLVREQGA----VLPAS----------YSDHVAVMAVL 663 >gi|53724173|ref|YP_103357.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 23344] gi|121601562|ref|YP_993558.1| exodeoxyribonuclease III [Burkholderia mallei SAVP1] gi|124384052|ref|YP_001029013.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10229] gi|126440535|ref|YP_001059656.1| exodeoxyribonuclease III [Burkholderia pseudomallei 668] gi|126449755|ref|YP_001081066.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10247] gi|126452052|ref|YP_001066939.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106a] gi|134277971|ref|ZP_01764686.1| exodeoxyribonuclease III [Burkholderia pseudomallei 305] gi|167003440|ref|ZP_02269226.1| exodeoxyribonuclease III [Burkholderia mallei PRL-20] gi|167720390|ref|ZP_02403626.1| exodeoxyribonuclease III [Burkholderia pseudomallei DM98] gi|167739381|ref|ZP_02412155.1| exodeoxyribonuclease III [Burkholderia pseudomallei 14] gi|167816592|ref|ZP_02448272.1| exodeoxyribonuclease III [Burkholderia pseudomallei 91] gi|167846507|ref|ZP_02472015.1| exodeoxyribonuclease III [Burkholderia pseudomallei B7210] gi|167895086|ref|ZP_02482488.1| exodeoxyribonuclease III [Burkholderia pseudomallei 7894] gi|167903470|ref|ZP_02490675.1| exodeoxyribonuclease III [Burkholderia pseudomallei NCTC 13177] gi|167911721|ref|ZP_02498812.1| exodeoxyribonuclease III [Burkholderia pseudomallei 112] gi|167919720|ref|ZP_02506811.1| exodeoxyribonuclease III [Burkholderia pseudomallei BCC215] gi|217421040|ref|ZP_03452545.1| exodeoxyribonuclease III [Burkholderia pseudomallei 576] gi|237813050|ref|YP_002897501.1| exodeoxyribonuclease III [Burkholderia pseudomallei MSHR346] gi|242317870|ref|ZP_04816886.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106b] gi|254178518|ref|ZP_04885173.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 10399] gi|254184341|ref|ZP_04890931.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1655] gi|254191371|ref|ZP_04897875.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pasteur 52237] gi|254195861|ref|ZP_04902287.1| exodeoxyribonuclease III [Burkholderia pseudomallei S13] gi|254261312|ref|ZP_04952366.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710a] gi|254297001|ref|ZP_04964454.1| exodeoxyribonuclease III [Burkholderia pseudomallei 406e] gi|254357938|ref|ZP_04974211.1| exodeoxyribonuclease III [Burkholderia mallei 2002721280] gi|52427596|gb|AAU48189.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 23344] gi|121230372|gb|ABM52890.1| exodeoxyribonuclease III [Burkholderia mallei SAVP1] gi|124292072|gb|ABN01341.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10229] gi|126220028|gb|ABN83534.1| exodeoxyribonuclease III [Burkholderia pseudomallei 668] gi|126225694|gb|ABN89234.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106a] gi|126242625|gb|ABO05718.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10247] gi|134251621|gb|EBA51700.1| exodeoxyribonuclease III [Burkholderia pseudomallei 305] gi|148027065|gb|EDK85086.1| exodeoxyribonuclease III [Burkholderia mallei 2002721280] gi|157807529|gb|EDO84699.1| exodeoxyribonuclease III [Burkholderia pseudomallei 406e] gi|157939043|gb|EDO94713.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pasteur 52237] gi|160699557|gb|EDP89527.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 10399] gi|169652606|gb|EDS85299.1| exodeoxyribonuclease III [Burkholderia pseudomallei S13] gi|184214872|gb|EDU11915.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1655] gi|217396452|gb|EEC36469.1| exodeoxyribonuclease III [Burkholderia pseudomallei 576] gi|237503790|gb|ACQ96108.1| exodeoxyribonuclease III [Burkholderia pseudomallei MSHR346] gi|242141109|gb|EES27511.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106b] gi|243061042|gb|EES43228.1| exodeoxyribonuclease III [Burkholderia mallei PRL-20] gi|254220001|gb|EET09385.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710a] Length = 258 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 82/302 (27%), Gaps = 68/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+L+ + + D D++ LQE Sbjct: 1 MRIATWNVNSLN----------------VRKQHVLDWLAQSDVDVLCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + S P + G Sbjct: 35 LKIPDEKFPREALEAAGYRSWFAGQKTYNGVAILAR------ASLPFDETDIVRNIPGFE 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + L+ + ++ + + LDS + Y Q L+ W+ + + Sbjct: 89 DAQQRLIAATIDGVRIVSAYFPNGQALDSDKFVYK------MQWLDALQAWLKDELQRYP 142 Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249 + GD+N +D + P + + + Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLVALGFVDAFRRFEQPEKTFT 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ + + D + ++ SDH P+ Sbjct: 203 WWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTV-------DRVPRTWEQPSDHTPVVA 255 Query: 301 DY 302 Sbjct: 256 QL 257 >gi|307727145|ref|YP_003910358.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003] gi|307587670|gb|ADN61067.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003] Length = 290 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 84/313 (26%), Gaps = 58/313 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 +RLV WNI +G D + + A+ L D DI+ +QE+ Sbjct: 1 MRLVDWNIQWGRGVDG-----------RVDLARIVREARALCDFDIMCMQEVTRGFHESP 49 Query: 75 --------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 + A++ + A+ + Sbjct: 50 SAGGLAGGPGADQFAELAALLPGMTVIDATGSDLPPIGTGSRRRQFGNAIVTRLPVRQVL 109 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 + L D + R A+E +++ + + V+ HL+ + ++ L + Sbjct: 110 RHSLPWPADPAKPSMLRVALEAVIDTDVGPLRVISTHLEFYS--ETQRLAQVERLRELHR 167 Query: 187 QAQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 +A + ++ PF ++ GDFN D + Sbjct: 168 EACDHARRPARAEKQDSPFADTGRPMSAIVCGDFNSAFQGAAYRKMLEPIADAPAFADAW 227 Query: 238 PKEKDSRCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + D+ + ++ + Sbjct: 228 TRAHGDSAREPTVGLYDKEQWPDGPFACDFIFVTEDLAPRVASCEV-----------DPH 276 Query: 290 KRLSDHCPISIDY 302 R SDH P+ ++ Sbjct: 277 SRSSDHQPMWLEL 289 >gi|288928925|ref|ZP_06422771.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp. oral taxon 317 str. F0108] gi|288329909|gb|EFC68494.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp. oral taxon 317 str. F0108] Length = 298 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 41/291 (14%), Positives = 84/291 (28%), Gaps = 44/291 (15%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS- 76 A VR++++N + + + K L+ D+V +QE+ S Sbjct: 48 AKAEGNVRIMTYNCFYCKSNTSNKTFSD------EHTADFAKVIKALNPDVVVIQELDSG 101 Query: 77 --YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 A + + + S I + ++ + L G Sbjct: 102 TTERAKRYLLDDIRRATGLDYDLFFGSAAPYSEGKIGPGVLYKRAMQPTSIKKVALPG-- 159 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R + L + +L HL D S +++ + L Sbjct: 160 -----KETRALMVLTFP----RFTLLGTHL------DLDATARKTSAEIVNHELTTLA-- 202 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 P AGD N ++ F +I + + + Sbjct: 203 -------TQPVFFAGDLNDSPSWKPELTAF--------PIITKAFDIITPQTGTSVDQPN 247 Query: 255 IPIDYFVMDQNAYKFL-IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY ++D+ + + ++ + + +SDH P+ +D F Sbjct: 248 ETIDYILVDKAHKGAVKVVQTAVVKQLEINGKVTETGTISDHFPVFVDVRF 298 >gi|262382529|ref|ZP_06075666.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262295407|gb|EEY83338.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 365 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 95/334 (28%), Gaps = 78/334 (23%) Query: 4 KYVLALVFFLVPCTASV--------------AQKVRLVSWNINTLSEQEGVSLWKNSVKR 49 K++L +F + C V + ++++++N+ + + N Sbjct: 68 KFLLIGIFSFLLCWGPVKRYFPFHSHKDVPREEVLKVLTYNVMAFGYKNHTKIAPN---- 123 Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 + QY N DADIV LQE + + + + S + + S Sbjct: 124 ------KIIQYIANSDADIVCLQEYATAKSEKSLTASKIYDA-LSMYPYRSVFYQSSTKF 176 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 IAV K + + + V I GKK+ +++ HL+SF Sbjct: 177 QSFGIAVFSKYPLSNSRMVKYDSDYN--------GSSVHEVNIKGKKLTLINNHLESFKL 228 Query: 170 LDSLENTYS-----------------------PSCSLLSQQAQWLKDWITQKKESLVPFV 206 YS P+ + ++QA+ + + I + Sbjct: 229 TMEDRTRYSSLIKSFSSDGLDDLKGAFEQKLGPAFRIRAKQAEAVSEEIKN--AKGEYVL 286 Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 + GDFN + D F + ID + N Sbjct: 287 VCGDFNDTPISYAHRTI------QGDLTDAFAESGRGMGITYNQNFFWFRIDNILHSPNM 340 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + SDH P+ Sbjct: 341 TSM--------------NCSVDKVAYSDHYPLWC 360 >gi|306843285|ref|ZP_07475893.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp. BO2] gi|306286516|gb|EFM58102.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp. BO2] Length = 369 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 44/366 (12%), Positives = 97/366 (26%), Gaps = 86/366 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKN----------------SVKRTTSDYTLLRQY------- 60 + ++N+ L + S ++N + R + Sbjct: 2 FTIATFNVENLMRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMT 61 Query: 61 ---AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 ADI+ LQE+ + A+ + + R + + I A+ +R Sbjct: 62 ALAIAETRADILCLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121 Query: 118 ------KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKI 157 + S+ L D R R + + + I G+ + Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGLYQLELAELGIEPHDRIFKRDCLNVDLRIGGEPL 181 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNR 213 + HLKS + + + S + +A+ ++ I +K + ++I GDFN Sbjct: 182 SLFVAHLKSMSGARNGLDGRASSHPVRLAEARAIRRIIEEKFGIDRVAERRWLICGDFND 241 Query: 214 KINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP 256 + + ++ + Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301 Query: 257 ----IDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 +DY + + + + + SDHCP Sbjct: 302 HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHCP 361 Query: 298 ISIDYD 303 +S+ + Sbjct: 362 VSVTLN 367 >gi|114571487|ref|YP_758167.1| exodeoxyribonuclease III [Maricaulis maris MCS10] gi|114341949|gb|ABI67229.1| exodeoxyribonuclease III [Maricaulis maris MCS10] Length = 270 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 31/306 (10%), Positives = 80/306 (26%), Gaps = 65/306 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + L SWNIN L+ + + D D++ LQE+ + + Sbjct: 2 TLTLASWNIN---------------SVRLRAVPLIADWVQEADPDVLCLQEI---KCLEE 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP+ + + +A+ K L ++ + Sbjct: 44 QFPEEAFR------EMGFRHFHVRGQKGMHGVAIASKYPLEDLGDVELCPRGEARHQ--- 94 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + + I + + ++ + D + +P + + ++ + + Sbjct: 95 --------RVGVEGIELHNFYIPAG--GDEPDPAINPRFAHKLEFLDRIERYFAGRASEN 144 Query: 203 VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 V+ GDFN + + + + Sbjct: 145 AALVLVGDFNIAPYEHDVWSHKQLLKVVSHTPVEVEALERIRQAGQFSDVARELIPMDEK 204 Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ A + + + + ++ SDH Sbjct: 205 IYTWWSYRAKDWRAANRGRRLDHIWASPAARDRALAGG--RDAFRIWEDERSREKPSDHA 262 Query: 297 PISIDY 302 P+++ Sbjct: 263 PVALTL 268 >gi|88811277|ref|ZP_01126533.1| Endonuclease/exonuclease/phosphatase [Nitrococcus mobilis Nb-231] gi|88791816|gb|EAR22927.1| Endonuclease/exonuclease/phosphatase [Nitrococcus mobilis Nb-231] Length = 280 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 87/288 (30%), Gaps = 56/288 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEMGS 76 +RL+++NI T E + R S+ + D DIV LQE+ + Sbjct: 32 LRLMTYNIQTGIETRFYHHYITRSWRHLLPDNNRLSNLDRIGGLIA--DFDIVGLQEIDA 89 Query: 77 YNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + + + R + V + + +++ L G Sbjct: 90 GSLRSGFINQAAYLAQRGGFPFWHFQTNRRIGRLARHSNGVLSRFRPLEVRNHRLPG--- 146 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R A+ L + + V+ +HL +Q ++ + + Sbjct: 147 ---MIPGRGALHLRFGGPAEGLDVVLLHLALGQ-------------RTRLRQLAYVAELV 190 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 ++ GD N ++ D K D + + + + R Sbjct: 191 NAC----RHVIVMGDLNC-LSRSVEFDYLDKHTDLCEPIH--------NLHTYPSWRPHR 237 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID+ ++ ++ LSDH P+ ++ + Sbjct: 238 NIDHILVSPTLQVR--------------SAEALNYPLSDHLPVIMEVE 271 >gi|260365545|ref|ZP_05778082.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus K5030] gi|260877608|ref|ZP_05889963.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AN-5034] gi|260895379|ref|ZP_05903875.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus Peru-466] gi|260901651|ref|ZP_05910046.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AQ4037] gi|308085255|gb|EFO34950.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus Peru-466] gi|308090661|gb|EFO40356.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AN-5034] gi|308108913|gb|EFO46453.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AQ4037] gi|308114359|gb|EFO51899.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus K5030] Length = 317 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 102/314 (32%), Gaps = 30/314 (9%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 S ++ V+ N+ S ++ + + L+ DI+ LQE+ Sbjct: 2 SQPSRITFVTANLFNFVAPPNAYYDFENIYSQEQWRDKLAWTQNQLEKLEPDIIGLQEVF 61 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLG 132 S F + +++T + AIA R V + + L Sbjct: 62 SIEETRAYFLSLGFP-YFATVDTPKIEDEYIYSRPVVAIASRFPIEDVKRVEFDSNSLTP 120 Query: 133 AKDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLD-------SLENTYSPSCSLL 184 + + +R+ + +V I + HLKS D S S Sbjct: 121 FGVNEAPDFSRKPIYAQVVHPVLGHIAIYVTHLKSQRPADTETPEPSSRVMARWLSTQQR 180 Query: 185 SQQAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 +A L+D + Q + +P V+ GD N+ I+ N+ +T + + ++ + Sbjct: 181 GWEAAMLRDAMQAQYRAHPIPTVLMGDMNQPISKESVNNVLTETFSDSVTELQLKDGWNL 240 Query: 244 RCN--------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRG 289 + + + +DY ++ Q I Y + + Sbjct: 241 QTGSSLEVRPATHYHFSTGNVLDYILLSQEFDTHSDISVAEVIDYQVLEQHLINPSYEKD 300 Query: 290 KRLSDHCPISIDYD 303 K SDH +S+ + Sbjct: 301 KNASDHAFVSLTVE 314 >gi|291298430|ref|YP_003509708.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] gi|290567650|gb|ADD40615.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] Length = 289 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 36/285 (12%), Positives = 77/285 (27%), Gaps = 52/285 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R S+NI+ + + V D + + + L+ D++ LQE+ + + Sbjct: 51 LRAASFNIHHGASPDDVL-----------DLERIARRIEALNVDVIGLQEVDRFWKRSDH 99 Query: 84 FPKNTWC-----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + W + + + A+ + ++ L D Sbjct: 100 VDQPAWLSRRLGLHVAFGLNELRRSDGAGRRREYGTAILSRWPIRETRNVALPRWDDHAR 159 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R +++ G + HL + Sbjct: 160 HGLLR----TEIDMPGGSLSFATTHLIHAHHDEERAAQAKAVAKQF-------------- 201 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + V+ GDFN + N + D + + + + K ID Sbjct: 202 ADDARRSVVVGDFNDEPNTPAIAAMTRRFTDAWAVA------GSGKGYSYSSTKPKRRID 255 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 Y ++ + R SDH PI +++ Sbjct: 256 YVFGSEDLEPRA------------MTVDDTDPRASDHLPILTEFE 288 >gi|126736755|ref|ZP_01752493.1| extracellular nuclease [Roseobacter sp. CCS2] gi|126713726|gb|EBA10599.1| extracellular nuclease [Roseobacter sp. CCS2] Length = 1132 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 42/332 (12%), Positives = 87/332 (26%), Gaps = 53/332 (15%) Query: 21 AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 ++ S N+ + +S++ L +DA ++ Sbjct: 633 GGNFKVASLNVLNYFTTIDEPGVTTDNGSDPRGADSLEEFERQADKLVNAIVAIDAAVLG 692 Query: 71 LQEMGSYNA-----VAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNV--- 121 L E+ + A + + + + ++ + D I + + V Sbjct: 693 LVEIENDFAGDTFAIKDIVDRVNAELGSEVYAFVDPGQEFVGGDAISNGLIYKVDEVGLN 752 Query: 122 ----RVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCF------ 169 + R NR A+ E G+ I V H KS Sbjct: 753 GDMAILETFEGRDFIDPLDAGRGLNRPAIAQTFEDLDTGQTITVSVNHFKSKGSLSGLEA 812 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKT 227 ++ + + + ++ A L W+ +I GD N Sbjct: 813 DEAQGDGQGNNNATRTEAADILAAWLNSDPTGQGSENTLILGDLNAYAKEDP-----LTV 867 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + E + +DY + + ++ + I +E D Sbjct: 868 LADAGFTDLAAAELGDAAYSFVFDGQIGTLDYALANDALADNVVGVTEWHINADEADALD 927 Query: 288 RG---------------KRLSDHCPISIDYDF 304 R SDH P+ + + F Sbjct: 928 YNLDFGRDPALFDGDSPNRNSDHDPVIVSFQF 959 >gi|308049374|ref|YP_003912940.1| endonuclease/exonuclease/phosphatase [Ferrimonas balearica DSM 9799] gi|307631564|gb|ADN75866.1| Endonuclease/exonuclease/phosphatase [Ferrimonas balearica DSM 9799] Length = 319 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 87/314 (27%), Gaps = 36/314 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + ++N+ E + + R + DI+ QE+ S + Sbjct: 5 FSIATFNLFNFVEPPLAYYDAENIYDATQWQRKCDWTRDRLIEMAPDIIGFQEVFSAAPL 64 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR---VLQQSYPLLGAKDSF 137 A + + + + A+A R V V + + Sbjct: 65 AAL--CEAQGLSHWALAPGQEEQDFIRRKPRVALASRYPIVETATVQPNPELVKALGLAQ 122 Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLD---------SLENTYSPSCSLLSQQ 187 +R+ ++ + + G + V+ +HLKS E + +L + Sbjct: 123 PFHFSRQPLKARLHVPGFSDVRVIVVHLKSPRAAWQPGERPLIADEELDQRVATPVLGRW 182 Query: 188 AQWLK----------DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND--SLI 235 A L+ D + ++ +P VI GDFN + D Sbjct: 183 ASALQRSAEAAMLCLDLMNEQLRDPLPSVILGDFNGDLGSDLLTLLQGGEEDAYRLQDAH 242 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRG 289 + R + N +D+ ++ Q D + Sbjct: 243 DLALYQGDRDPTHYWGANGSVLDHILLSAQFNAGFGQSLAQVDEVVVWDRHLRFNDAEQD 302 Query: 290 KRLSDHCPISIDYD 303 + SDH P+ Sbjct: 303 RMASDHAPVLARIS 316 >gi|254573632|ref|XP_002493925.1| Component of the CCR4-NOT transcriptional complex [Pichia pastoris GS115] gi|238033724|emb|CAY71746.1| Component of the CCR4-NOT transcriptional complex [Pichia pastoris GS115] Length = 768 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 43/324 (13%), Positives = 92/324 (28%), Gaps = 43/324 (13%) Query: 22 QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--- 76 ++++N + ++ + L++ +L DI+ LQE+ Sbjct: 423 NTFTMMTYNTLCQHYATKKMYRYTPSWALDWDYRRERLKEQILDLQTDIICLQEVEHKTF 482 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + + + + K S A R + +++ + G Sbjct: 483 DDFWQPIMLSHGYKGIFHVKSRAKTMKESSAYKVDGCATFYRTSKFQAVERKHFEYGRIA 542 Query: 136 SFSRAGNRR---------------AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + + L +G K+ V + HL + Sbjct: 543 MSQDKFKKTEDLFNRFLNKDNIASVLILEHIPSGNKLVVANTHLHWDPEFND--VKTMQV 600 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 LL + ++ ++ K + VP +I GDFN K++ T+D ++ +I Sbjct: 601 GVLLDELQAVIRKHLSPKDITKVPLLICGDFNSKVHSAVYQLFSQGTVDKHEDIIGRDYG 660 Query: 241 KDSRC-------------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILY 280 K + N + IDY + + Sbjct: 661 KFTEEGFRHPFHLQSSYDSIGELPYTNVSPTFTDVIDYIWYSTPSLSVKGVLGQVDPDYS 720 Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304 SDH P+ + F Sbjct: 721 KNIIGFPNADFPSDHIPLLSTFMF 744 >gi|83409938|emb|CAI64359.1| conserved hypothetical protein [uncultured archaeon] Length = 347 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 39/334 (11%), Positives = 99/334 (29%), Gaps = 60/334 (17%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78 + K+R+ ++N+ L + ++R L+ADI+ LQE+ Sbjct: 21 STKLRIATFNLENLDD------KPRQTPTLDERIAVMRPQLVRLNADILCLQEVNGQEKT 74 Query: 79 -------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 A+ K+ + +++ + ++ + + + + V Y Sbjct: 75 GQPRRLLALEKLVEGTPYVEYHTVSTMTA-DGTQVYDERN--LVILSRYEIVEHHQYKHD 131 Query: 132 GAKDSFSR--------------AGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176 A + + R ++++ + V+++HLKS + Sbjct: 132 HAPAPWYQKVTAEPQEEEAKEVKWERPIQHAKIKLDQNRFFQVINLHLKSRLPSNIEGQK 191 Query: 177 YSP---------------SCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLG 219 + S QA + I + + V+ GDFN + + + Sbjct: 192 LNTFTWKTACGWAEGFFVSSMKRVGQALETRMLIDKLFDEDEDALIVVCGDFNAESDEVP 251 Query: 220 NNDDFWKT-------IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 + + +S + + ID+ ++ ++ + Sbjct: 252 VEAIRGDVENTGNGKLARRALVPCERTIPESSRFSMLYIGQGRMIDHLLVSRSLLPYYTG 311 Query: 273 ESFSE---ILYNEDDIKSRGKRLSDHCPISIDYD 303 + + SDH P+ ++ Sbjct: 312 SEIHNELLHDESIAFATDKKYPESDHAPVIAKFE 345 >gi|302525892|ref|ZP_07278234.1| exodeoxyribonuclease III [Streptomyces sp. AA4] gi|302434787|gb|EFL06603.1| exodeoxyribonuclease III [Streptomyces sp. AA4] Length = 265 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 80/305 (26%), Gaps = 70/305 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 VR+ +WN+N + + N D++ LQE+ + Sbjct: 2 TVRVATWNVN----------------SIVPRLPRVLDWLDNTAPDVLCLQELKNTTEA-- 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + +A+ K L G +A Sbjct: 44 --------FPADEIVARGYEVAAYGLGRWNGVAILSKIGLDDVVRG-LPGEPGFDGKAEA 94 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + I V +++ + + Y + + L D + ++ Sbjct: 95 RA-----IGATCGGIRVWSVYVPNGREPQNPHYAYK------LEWFEKLSDLVGEELRHA 143 Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 PF + GDFN K + FP+ + Sbjct: 144 RPFAVLGDFNVAPTDEDVWDISVFAESTHVTEPERAALKKLRDAGLSDVFPRPLKYD-HP 202 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + ID V + + +S+ D +GK SDH PI Sbjct: 203 FTYWDYRAGNFPNNKGMRID-LVYGNEVFAKAVTDSY------VDREARKGKGPSDHAPI 255 Query: 299 SIDYD 303 +D + Sbjct: 256 VVDLE 260 >gi|224823708|ref|ZP_03696817.1| exodeoxyribonuclease III Xth [Lutiella nitroferrum 2002] gi|224604163|gb|EEG10337.1| exodeoxyribonuclease III Xth [Lutiella nitroferrum 2002] Length = 257 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 77/302 (25%), Gaps = 70/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N+L + Q+ D++ LQE Sbjct: 1 MRLATWNVNSL----------------KVRLPQVLQWLAETPVDVLCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ S + R Sbjct: 35 LKMDQDAFPLAEIEAAGYRAAWLGQKTYNGVAIL----VRDGHSLDDVVPGIPGYDDEQR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V+ + + +DS + Y + L+ ++ + Sbjct: 91 RVIAATV----GGVRVICAYFVNGEAVDSPKYPYKLA------WLAELERYVADELTRHP 140 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249 + GD+N + D K + L + + Sbjct: 141 SLALLGDYNIAPDDRDVYDPDAWKDKVLCSVPERDAFRRLIGLGLSDSFRLFNQDEKQYS 200 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ + D + +R SDH P+ + Sbjct: 201 WWDYRAMMFRRNLGLRIDHILISDALKARATECVI-------DKAPRKWERPSDHTPVVL 253 Query: 301 DY 302 Sbjct: 254 TL 255 >gi|330837418|ref|YP_004412059.1| Endonuclease/exonuclease/phosphatase [Spirochaeta coccoides DSM 17374] gi|329749321|gb|AEC02677.1| Endonuclease/exonuclease/phosphatase [Spirochaeta coccoides DSM 17374] Length = 372 Score = 93.1 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 97/360 (26%), Gaps = 76/360 (21%) Query: 2 IRKYVLALVFFLVPCTASVAQ------KVRLVSWNINTL---SEQEGVSLWKNSVKRTTS 52 I +V+ L+ + C+ V + V ++SWN+ L R Sbjct: 6 ISIHVILLMCIVSLCSCPVGEGEAAPTDVTILSWNVQNLMDGRTSGTEYEEYGPSSRWDE 65 Query: 53 -----DYTLLRQYAKNL---DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104 +R+ + DADI+ LQE+ + VA + Y Sbjct: 66 TAYHLRLEDIRKVLSSRIFPDADIIVLQEVENSGVVADLIAGPLARRGYRWYAAAGQEGG 125 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164 I TAI R VR+ Q G R A+E + ++G + V +H Sbjct: 126 A----ICTAIISRLNPVRITVQGV-----------EGFRPALEAVFNVHGGTVVVWAVHA 170 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL-GNNDD 223 KS D + + + L L + + VIAGD N G Sbjct: 171 KSRKEGDRVTEEGRRALASLLSTRARLWR----QADPGCLLVIAGDMNEDPGEEKGMERG 226 Query: 224 FWKTIDPNDSLIRFPKEKDS---------------------------RCNANKNLRNKIP 256 + + S E R + Sbjct: 227 YRTALVRAASSHAREWEAAGSLVVSGMQGGQKGSWYSPWLDGRINTFRPGSYVYEGTWHR 286 Query: 257 IDYFVMDQ-------NAYKFLIQESFSEILYNEDDIKSRG-----KRLSDHCPISIDYDF 304 D+ + + + D + SDH P+ + F Sbjct: 287 YDHILFSGLAPADRAGWRMKEFGCNAPDSAVASDGTPRAWNVRLRRGTSDHFPVWGVFRF 346 >gi|284042535|ref|YP_003392875.1| exodeoxyribonuclease III Xth [Conexibacter woesei DSM 14684] gi|283946756|gb|ADB49500.1| exodeoxyribonuclease III Xth [Conexibacter woesei DSM 14684] Length = 262 Score = 93.1 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 85/302 (28%), Gaps = 66/302 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RLV+WN+N+L + ++ D++ LQE + A Sbjct: 1 MRLVTWNVNSL----------------RVRLPRVLEFLAEHRPDVLCLQETKTDAAAFPH 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A P +G ++ +R Sbjct: 45 AELAAAGYVAADHSGGRWAGVAIVARTELGVA------------DPAVGLPGEPAQDESR 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + G ++ V +++ + L+S L A+ + + + + Sbjct: 93 WIEATV----GGELRVASVYVPNGRELESEWYAAK--LEFLDAMARRVGELRGDDAGAPL 146 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGD N + L D + ++ L + + Sbjct: 147 PLVVAGDMNVAPSDLDVYDPAVFATSTHTSAAERTALRAVEQAGLLDAYRQLHPDDV-GY 205 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID + + + L + +G R SDH P+ Sbjct: 206 TWWDYRQGHFHRGLGLRIDLILASPDLAERLTRVGIERDY-------RKGSRPSDHVPLV 258 Query: 300 ID 301 D Sbjct: 259 AD 260 >gi|262279680|ref|ZP_06057465.1| nuclease [Acinetobacter calcoaceticus RUH2202] gi|262260031|gb|EEY78764.1| nuclease [Acinetobacter calcoaceticus RUH2202] Length = 812 Score = 93.1 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 48/329 (14%), Positives = 93/329 (28%), Gaps = 46/329 (13%) Query: 15 PCTASVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFL 71 A +R+ S+N+ N + G + + + D + K +DAD+ L Sbjct: 455 SVLTKNANHIRVASFNVLNYDNGATGFPTERGATTQAEFDKQHRKIVSALKAIDADVYGL 514 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYP 129 E+ + + S + + R + I AI K V+ L + Sbjct: 515 MEIANNGYGPDSAIAHLTKALGSDWKYVVPENLDRLGGDAIAVAIIYNSKRVKPLNKPVV 574 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF---LDSLENTYSPSCS---- 182 L D + A K V+ HLKS S + Sbjct: 575 L----DLGDKNRTTLAQSFQAVRGNKTFTVIPNHLKSKSCSGVDASSTDADQKDGQGCWN 630 Query: 183 -LLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + + W+ + ++ GD N ++ + L Sbjct: 631 PTRVKAVDQIVQWLAKNPTQVQKQNALLVGDMNSYAKEEPI--LSFEKANYKVLLNDAKI 688 Query: 240 EKDSRCNANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-- 289 + ++ + +D+ + D Y +++ I +E + Sbjct: 689 GQGTQAYSYVYGVASDANGNGGAGNLDHAIADAALYPKVVRTFAWHINADEPTVLDYNEE 748 Query: 290 ---------------KRLSDHCPISIDYD 303 R SDH P+ +D D Sbjct: 749 YKTDEQKALFYGEDAYRSSDHDPVIVDLD 777 >gi|158522340|ref|YP_001530210.1| endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans Hxd3] gi|158511166|gb|ABW68133.1| Endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans Hxd3] Length = 248 Score = 93.1 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 38/287 (13%), Positives = 83/287 (28%), Gaps = 61/287 (21%) Query: 29 WNINTLSEQEGVSL-----WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY------ 77 +NI + G + ++T + + + ++ D D+V L E+ Sbjct: 9 YNIRYGTGSGGWRFHAPVPFSGYFRKTQKAFPEIASFIRSCDPDMVGLVEVDGGSGRHNG 68 Query: 78 -NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 N +V + + + T+ + R AV ++ + + + Sbjct: 69 INQARQVAEELGYHCVFQTKYKPSPFSRAIPIMGKQGNAVLARHDILGHRYHYFEKGIKR 128 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + + VE+ ++++ + L QQ L I Sbjct: 129 ---------LIIEVELEDVVLFLVHLSLHPG---------------HRQQQLAELGLLIR 164 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 P ++ GDFN + + S + + R + Sbjct: 165 GV---GKPVIVGGDFNAFAGS--------RELAGFLSATGLVSANAANVRTFPSKRPRWE 213 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +DY + +D+ + R SDH P+ D+ Sbjct: 214 LDYIFHSRQVR--------------VNDMHAPSVRFSDHLPLVCDFT 246 >gi|148927710|ref|ZP_01811154.1| exodeoxyribonuclease III Xth [candidate division TM7 genomosp. GTL1] gi|147886940|gb|EDK72466.1| exodeoxyribonuclease III Xth [candidate division TM7 genomosp. GTL1] Length = 266 Score = 93.1 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 81/304 (26%), Gaps = 65/304 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N R + +++ K D DI+ LQE + A++ Sbjct: 1 MKIYSWNVNG--------------IRAVVNKGAFQKFVKEHDPDILCLQETKAERGQAEI 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S + +++ + + Y + G R Sbjct: 47 -DLPHYIENWNSAVKKGYSGTAIFSKTQ-PLSIINGFPEDIIKKYKVEGDVYGDPNKEGR 104 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 ++ + +++ ++ + L + L+ Sbjct: 105 -----VMAAEFEDFYIVTVYTPNSKRELTRLTLREKHWDPAFLAYVKQLEK--------T 151 Query: 203 VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P + GD N + ++ + F Sbjct: 152 KPVIFCGDLNVAHTEDDLARPDTNHGEHGFTDEEREGFQKFLDAGFVDTFRMFTPKGNGH 211 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF++ + SDHCPI Sbjct: 212 YTWWTHWANARARNVGWRIDYFLVSHALKSKVKSAKIH-----------ADVMGSDHCPI 260 Query: 299 SIDY 302 SI+ Sbjct: 261 SIEL 264 >gi|126208451|ref|YP_001053676.1| exonuclease III [Actinobacillus pleuropneumoniae L20] gi|303251086|ref|ZP_07337272.1| exonuclease III [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253573|ref|ZP_07339711.1| exonuclease III [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|126097243|gb|ABN74071.1| exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|302647493|gb|EFL77711.1| exonuclease III [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650096|gb|EFL80266.1| exonuclease III [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 267 Score = 93.1 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 81/311 (26%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + D++ LQE + + Sbjct: 1 MKFISFNINGL----------------RARPHQLEAIIEKHQPDVLGLQEIKVADEDFPW 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +F+ H +A+ K + + D+ R Sbjct: 45 DLVNHLGYHVFHH------------GQKGHYGVALLTKKEPLAVRKGFPTDNADAQKR-- 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +E + VL+ F ++ + L+ ++ + Sbjct: 91 ---MIMADIETEFGVLTVLN-----GYFPQGENRSHETKFPAKEKFYADLQHYLESELSP 142 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 P VI GD N L ++ + + F Sbjct: 143 ENPIVIMGDMNISPTDLDIGIGEPNRKRWLRDGKCSFLPEEREWLDRLYSYGLIDTFRAM 202 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + + + ++ D ++ Sbjct: 203 NPQANDKFSWFDYRSKGFDDNRGLRIDLVLASKGLAERCVETGI-------DLEIRAMEK 255 Query: 292 LSDHCPISIDY 302 SDH P+ + Sbjct: 256 PSDHSPVWAVF 266 >gi|228473947|ref|ZP_04058688.1| endonuclease/exonuclease/phosphatase [Capnocytophaga gingivalis ATCC 33624] gi|228274461|gb|EEK13302.1| endonuclease/exonuclease/phosphatase [Capnocytophaga gingivalis ATCC 33624] Length = 343 Score = 93.1 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 37/290 (12%), Positives = 77/290 (26%), Gaps = 53/290 (18%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + +++ ++S+N+ + + S T + + K I+ LQE Sbjct: 97 TSPEQLSVMSFNVRLFNHYKWSS--------DTLLREKILTFVKEEHPKILALQEF---- 144 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + S + A+ + S ++ Sbjct: 145 ---------YYKEKESFPFYKYKKFIYKHKKDKIGQAILSDYPIINSGSLDFPHTGNN-- 193 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC------SLLSQQAQWLK 192 V + +NG + + +H +SF D+ + + + Q ++ Sbjct: 194 ------GVYADIVVNGDTLRLYSLHFESFHIEDTDISQENSKRIFLKLPRRFAIQQAQVE 247 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + P V+ GDFN ++ + F + Sbjct: 248 LFNAHADSCPYPIVVCGDFNNTAFSY-----LYQKFQDRGLVDSFEEAGSGFGRTYDFPY 302 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IDY + D F + + SDH PI Sbjct: 303 FPFRIDYILADP---------YFKITSHKVYTGRDY----SDHFPIRATL 339 >gi|75765927|pdb|1ZWX|A Chain A, Crystal Structure Of Smcl Length = 301 Score = 93.1 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 40/300 (13%), Positives = 91/300 (30%), Gaps = 33/300 (11%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++ S N+ S ++ N + +D Y K + D+V L E +A Sbjct: 8 PGNFKITSHNVYLFSRN----IYPNWGQMHRADLIAQADYMK--NNDVVILNEAFDTSAS 61 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLG 132 ++ + T + + + +AV + V + + Sbjct: 62 HRLLNNLREMYPHQTPVIGRSKHGWDKTEGNYSNFALEDGGVAVVSQWPIVEKSQHIFQR 121 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + R N+ + + NGK ++ H ++ D + S ++ ++Q Q ++ Sbjct: 122 GGGA-DRLSNKGFAYVKIMKNGKPYHIIGTHTQA----DDSLISKDTSRAIRAEQMQEIQ 176 Query: 193 DWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN--- 248 +I + I GD N +D K ++ + + N Sbjct: 177 TFIAKKNIPKDEIIFIGGDLNVNYGTDEYHD-MLKLLNVSSPANFNGQMATWDPTTNSML 235 Query: 249 --KNLR-NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPIS 299 + +DY ++ + + + + SDH P+ Sbjct: 236 KESYPKAAPEYLDYIFVENGHARPHSWHNKVLHTKSPQWSVKSWFKTYTYQDFSDHYPVV 295 >gi|86134970|ref|ZP_01053552.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter sp. MED152] gi|85821833|gb|EAQ42980.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter sp. MED152] Length = 351 Score = 93.1 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 40/351 (11%), Positives = 89/351 (25%), Gaps = 59/351 (16%) Query: 2 IRKYVLALVFFLVPCTASVAQK------VR-LVSWNINTLSEQEGVSLWKN--------- 45 ++K + LV + AQK +R + +N+ L + + + Sbjct: 1 MKKTLSFLVLLFIVAFTVQAQKKGKQYNIRTIAFYNLENLFDTINDTSINDEASPMMELK 60 Query: 46 --SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTE 96 + L + AD ++ + E+ + + + + Sbjct: 61 SNRSEVYWDKIDKLSSVIVQIGADKANTSPTLLGVSEVENLSVLEDLVKSKN---LAKKG 117 Query: 97 RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK 156 I H I AI +K+ + + + + R + + ++ + Sbjct: 118 YGIIHYDSPDKRGIDVAILYQKRYFKPVHHEVFNPNIYRNGYKVYTRDQLLVSGYLDDEL 177 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216 I V+ H S ++ + Q + I + K+ + GDFN Sbjct: 178 IHVIVNHWPSRSGGEAKSRPLREKAA---YQNTKIIAQIRE-KDPNAKIITMGDFNDDPT 233 Query: 217 YLGNNDDFWK-----TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF-- 269 + + D + N N D ++ Sbjct: 234 NSSFKEVLKTKSDKSEVGDLDIYNPYEDLHRRGFNTLGYRDNINLFDMILISSPLLDKGE 293 Query: 270 --------------------LIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + F + SDH P+ + Sbjct: 294 KDFSDYKMFKAMIFNKRFLTNRKGQFKGYPFRSFSYGGYTGGYSDHYPVYM 344 >gi|209523548|ref|ZP_03272102.1| exodeoxyribonuclease III [Arthrospira maxima CS-328] gi|209495953|gb|EDZ96254.1| exodeoxyribonuclease III [Arthrospira maxima CS-328] Length = 263 Score = 93.1 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 93/304 (30%), Gaps = 68/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ +WN+N RT D + + + D D++ LQE + + Sbjct: 1 MKIATWNVN--------------SIRTRQD--QVLSWLQGQDIDVLCLQETKVIDQDFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 F + + ++ ++ N AI R V+ P+LGA Sbjct: 45 SPFEELGYHVYIYGQKAYN----------GVAIFSRLNIESVIMGFTPILGADQVGELDD 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R + +++ I ++++++ + + S + Y Q L D++ Q Sbjct: 95 QKRVIAGVID----DICIVNVYIPNGSSVGSDKYEYK------LQWLNRLGDYLQQMLIK 144 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247 I GDFN + + N L ++ Sbjct: 145 YPHLCICGDFNIAPEDRDIYNPQNRENHIMASAAERQALDAIANLGLADGFRKFTQDGGH 204 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ + Y+ I D + SDH P+ Sbjct: 205 FTWWDYRAASFTRNRGWRIDHHYLSPGLYQNAIACYI-------DTEPRTQPKPSDHAPV 257 Query: 299 SIDY 302 ++ Sbjct: 258 ILEI 261 >gi|217976524|ref|YP_002360671.1| exodeoxyribonuclease III Xth [Methylocella silvestris BL2] gi|217501900|gb|ACK49309.1| exodeoxyribonuclease III Xth [Methylocella silvestris BL2] Length = 270 Score = 93.1 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 29/307 (9%), Positives = 78/307 (25%), Gaps = 65/307 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + +WNIN L+ ++ D++ LQE +A Sbjct: 2 SFSIATWNIN----------------SVRLRIDLVARFLNEHAPDLLCLQETKCRDA--- 42 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + +L + + +A+ + D+ Sbjct: 43 ------EFPLSAFHKLGYPHVEINGQKGYHGVAIASRLPLGDIDRRGFCEKGDARH---- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 AV + + + + + ++ + D + +P + + W+ + Sbjct: 93 -LAVSFTPQGAARPVRLHNFYVPAG--GDEPDPLINPKFAHKLAFLDEMAAWMHHGAIAA 149 Query: 203 VPFVIAGDFNRKINYLG--NNDDFWKTID--------------PNDSLIRFPKEKDSRCN 246 ++ GD N ++ + + + + Sbjct: 150 SDAILVGDLNIAPLEADVWSHKALLRVVSHTPIEVEKFGVFQQAGPWVDAMRRYVPPEEK 209 Query: 247 ANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ ++ ++ L +R SDH Sbjct: 210 LYTWWSYRARDWALSGRGRRLDHVLVSESLAPRLGG-------MKVLTESRGWERPSDHV 262 Query: 297 PISIDYD 303 P+ + +D Sbjct: 263 PVIVRFD 269 >gi|221633952|ref|YP_002523178.1| putative endonuclease/exonuclease/phosphatase family protein [Thermomicrobium roseum DSM 5159] gi|221156684|gb|ACM05811.1| putative endonuclease/exonuclease/phosphatase family protein [Thermomicrobium roseum DSM 5159] Length = 608 Score = 93.1 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 83/288 (28%), Gaps = 56/288 (19%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + + +V++NI + R D Q + L DIV LQE+ Sbjct: 374 PVPRAGGNDLLVVTYNIQ---------SGYDRQHRW--DLEATAQAIERLQPDIVLLQEV 422 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 V + TW S + + +++D AV + ++ + Sbjct: 423 SRGWLVTSSADQLTW---LSRRLGMQAAWGPASDDGLWGNAVLSHGQPLEIRTTRFRVTE 479 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R AV + + + +WV HL + + ++ Q + L + Sbjct: 480 NL-----QRGAVAVRLAPHTGSLWVASTHL----------DDPRQAVTVRLAQIEELLVF 524 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + L P V+ GDFN + + + + + Sbjct: 525 LQ----PLRPLVLGGDFNAEPGSPELIRLSESGLIDAAAAVGATDPTSAD---------D 571 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IDY + SDH P+ + Sbjct: 572 RRIDYLFITDELRPLAGSVPPIS--------------ASDHRPVVVRL 605 >gi|326801889|ref|YP_004319708.1| exodeoxyribonuclease III Xth [Sphingobacterium sp. 21] gi|326552653|gb|ADZ81038.1| exodeoxyribonuclease III Xth [Sphingobacterium sp. 21] Length = 259 Score = 93.1 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 33/302 (10%), Positives = 86/302 (28%), Gaps = 70/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N ++ +L ++ + D+V LQE Sbjct: 1 MKIATYNVNGVNG----------------RLPVLLRWLEEAKPDVVCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R ++ +A+ +++ +++ L G + Sbjct: 35 LKAPQEKFPEQAIREAGYNVIWHGQKSWNGVAILARHLDIIEFGRVLPGDPEDTHSRY-- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + I + ++L + + + Y + Q L + + + Sbjct: 93 ------IEASINNIHIGCLYLPNGNPVPGPKFDYK------LKWLQRLANHAQELLNKNI 140 Query: 204 PFVIAGDFNRKINYLG---NNDDFWKTIDPND-----------SLIRFPKEKDSRCNANK 249 P ++ GD+N L + + ++ Sbjct: 141 PVILTGDYNVIPTELDVYKPERWVDDALFRPEVRMAFSDLMTQGWTDAIRQLYPNERIYT 200 Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+F++ + L+ D ++ SDH P+ I Sbjct: 201 FWDYFRNAYGRDAGLRIDHFLLSPQLVEKLVAAGV-------DRYVRGWEKTSDHAPVWI 253 Query: 301 DY 302 + Sbjct: 254 EL 255 >gi|254475570|ref|ZP_05088956.1| exodeoxyribonuclease III [Ruegeria sp. R11] gi|214029813|gb|EEB70648.1| exodeoxyribonuclease III [Ruegeria sp. R11] Length = 268 Score = 93.1 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 36/306 (11%), Positives = 89/306 (29%), Gaps = 65/306 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + L ++ + D+V LQE+ S V + Sbjct: 1 MKIATFNING----------------IKARINALPEWLDDAQPDVVVLQEIKS---VDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + ++ +A+ K + D +R Sbjct: 42 FPRELF-------EDRGYNVETHGQKSFNGVAILSKLPLEDVRRGLPGDDSDEQARW--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLD---SLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +E V + + I + ++L + ++ + + ++ + Sbjct: 92 --IEATV-VGKQAIRICGLYLPNGNPVELNADGTPVEGGKYAYKLAWMERMRARAQALLD 148 Query: 201 SLVPFVIAGDFNRKI---NYLGNNDDFWKTIDPND-----------SLIRFPKEKDSRCN 246 +P ++AGD+N + + + + + Sbjct: 149 EEMPALMAGDYNIIPQAEDAKKPEAWLEDALHRTESRAAFQRIVNLGFTEAFRARHQGPG 208 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+F++ A ++ D + SDH P Sbjct: 209 HYSFWDYQAGAWQRNNGIRIDHFLLSPQAADLMLDCQI-------DKDVRGRDKPSDHVP 261 Query: 298 ISIDYD 303 + ++ D Sbjct: 262 VWVELD 267 >gi|145226094|ref|YP_001136748.1| endonuclease/exonuclease/phosphatase [Mycobacterium gilvum PYR-GCK] gi|145218557|gb|ABP47960.1| Endonuclease/exonuclease/phosphatase [Mycobacterium gilvum PYR-GCK] Length = 399 Score = 93.1 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 38/279 (13%), Positives = 77/279 (27%), Gaps = 23/279 (8%) Query: 45 NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104 N + + ++ ADIV + E + A+ + + Sbjct: 123 NPEPVSELATDHMAMVIRDSGADIVGVVEADNRVALDMFAQSFLKRVGCRPYEQVMLFDG 182 Query: 105 DSNNDIHTAIAVRKK--NVRVLQQSYPLLGAKDSFSRAGNRRA--VELLVEINGKKIWVL 160 + I + VR + +++ D R +R + E +G+ + VL Sbjct: 183 NDPRGIDVGLLVRDRASYPVTYFRTHIFEPDPDGSGRLFSRDCAEYHITEEASGRTVVVL 242 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL-VPFVIAGDFNRKINYLG 219 HLKS + +QA+ + + TQ + GD N G Sbjct: 243 VNHLKSKGYNSE---DDPIGAKQRRRQAEGIAEIYTQLVRDGFDQVAVLGDLNDSPTLDG 299 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSR----CNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + + + + IDY ++ + ++ Sbjct: 300 KPESSLQPLFDTGLKDISEHDGFDPGERLGTFGTGHTLASKIDYILLSPALSERVVAGGI 359 Query: 276 -----------SEILYNEDDIKSRGKRLSDHCPISIDYD 303 + D + + SDH I D + Sbjct: 360 IRSGMWRGPRVRKPWKMYDTLTAEQHAASDHALIWADLE 398 >gi|116073418|ref|ZP_01470680.1| Exodeoxyribonuclease III xth [Synechococcus sp. RS9916] gi|116068723|gb|EAU74475.1| Exodeoxyribonuclease III xth [Synechococcus sp. RS9916] Length = 276 Score = 93.1 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 32/300 (10%), Positives = 84/300 (28%), Gaps = 63/300 (21%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + SWN+N + + + ++ D++ LQE +FP Sbjct: 3 IASWNVN----------------SVRTRLDHVLAWLQSHQPDLLCLQE---TKVADPLFP 43 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + + + +A+ + + + Sbjct: 44 QTAFESI-------GYRVSFHGQKSYNGVALISRTPLDDVRCGFIGELPGDLEAGEL-GE 95 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + ++ + V+++++ + L S + Y + LK + +E P Sbjct: 96 QKRVISALLDGVRVVNLYVPNGSSLTSDKYPYK------LKWLNCLKRYREAAQERDEPL 149 Query: 206 VIAGDFNRKINYLGNND------------DFWKTIDP--NDSLIRFPKEKDSRCNANKNL 251 I GDFN + +D ++ + ++ + + Sbjct: 150 CIVGDFNIGMEARDIHDPERLTGGIMASDAERTALNEALGEGMVDVFRAFEPDAGHWSWW 209 Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ + ++ + ++ SDH P+ +D Sbjct: 210 DYRSGAWNRDSGWRIDHIYLSEDLLDLARSCVIH-------KQERGKEQPSDHAPVVVDL 262 >gi|306844277|ref|ZP_07476869.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp. BO1] gi|306275349|gb|EFM57090.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp. BO1] Length = 369 Score = 93.1 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 44/366 (12%), Positives = 99/366 (27%), Gaps = 86/366 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKN----------------SVKRTTSDYTLLRQY------- 60 + ++N+ L + S ++N + R + Sbjct: 2 FTIATFNVENLMRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMT 61 Query: 61 ---AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 ADI+ LQE+ + A+ + + R + + I A+ +R Sbjct: 62 ALAIAETRADILCLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121 Query: 118 ------KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKI 157 + S+ L D R R + + + I G+ + Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGLYQPELAELGIEPHDRIFKRDCLNVDLRIGGEPL 181 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNR 213 + HLKS + + + S + +A+ ++ I +K + ++I GDFN Sbjct: 182 SLFVAHLKSMSGARNGLDGRTSSHPVRLAEARAIRRIIEEKFGIDRVAERRWLICGDFND 241 Query: 214 KINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP 256 + + ++ + Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301 Query: 257 ----IDYFVMDQNAYKF---LIQESFS------------EILYNEDDIKSRGKRLSDHCP 297 +DY + ++ + + + + SDHCP Sbjct: 302 HLCQLDYIMASPAFAAKNEHVVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHCP 361 Query: 298 ISIDYD 303 +S+ + Sbjct: 362 VSVTLN 367 >gi|291333503|gb|ADD93201.1| exodeoxyribonuclease III [uncultured archaeon MedDCM-OCT-S08-C282] Length = 259 Score = 93.1 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 93/306 (30%), Gaps = 74/306 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81 +R VSWN+N L + + Y +L AD+V LQE + Sbjct: 1 MRFVSWNVNGLRA---------------AIRKGIDGYFDDLKADVVMLQETRTLEEQLPK 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 W + +S + + A+ + K G + + Sbjct: 46 DWAWPTGWDVTLHPAEKKGYSGVATASTQAHAVVAKGK------------GGVFDSNDSE 93 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + V+ + ++ +L S D + + + + +I + Sbjct: 94 GR-VLVCEVD----GVVCVNTYLPSGSNKDERQ-------TFKEGWMEEWRQFIRPYLDD 141 Query: 202 LVPFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P V+ GD N + ++ + + L F + Sbjct: 142 TRPVVVCGDLNIAHTEDDIWNPKGNARNSGFLPHERAWFSDLLADGWLDAFRHKVGDGAK 201 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDYF+++ A + ++ + ++ G +SDH P Sbjct: 202 VYSWWSNRGQARAKDRGWRIDYFLLNPAAAEAMVDCTI---------VRQGGIDVSDHAP 252 Query: 298 ISIDYD 303 + +D D Sbjct: 253 VVLDLD 258 >gi|268318163|ref|YP_003291882.1| exodeoxyribonuclease III Xth [Rhodothermus marinus DSM 4252] gi|262335697|gb|ACY49494.1| exodeoxyribonuclease III Xth [Rhodothermus marinus DSM 4252] Length = 254 Score = 93.1 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 34/302 (11%), Positives = 79/302 (26%), Gaps = 75/302 (24%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + +WN+N + + Q+ + DIV LQE +A Sbjct: 3 VATWNVN----------------SIRARLERVLQWLDRTEPDIVCLQETKVVDA------ 40 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 R + + +A+ + + + F +A Sbjct: 41 ----DFPADPFRERGYELAVFGQKAYNGVAILSRLPLQDVRRGLDGEQEARFLQARC--- 93 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 G ++ V +++ + + S Y + L+ ++ + P Sbjct: 94 --------GDRLVVCSVYVPNGGTVGSEAWDYK------LRWFDRLRAYLERAASPETPL 139 Query: 206 VIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 ++AGDFN + ++ + + + Sbjct: 140 LLAGDFNVAPEPRDVAFPEAWADSVLFHEAARAAFRKLIDWGLVDLIRLHHEGP-GPFTW 198 Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + ID+ + + + +GK+ SDH P+ Sbjct: 199 WDYRNLAFPRGDGLRIDHLLATPPVAACCTEAGVH-------REERKGKKPSDHAPVWAR 251 Query: 302 YD 303 + Sbjct: 252 LN 253 >gi|255601665|ref|XP_002537723.1| conserved hypothetical protein [Ricinus communis] gi|223515316|gb|EEF24660.1| conserved hypothetical protein [Ricinus communis] Length = 287 Score = 93.1 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 91/311 (29%), Gaps = 57/311 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL+SWN+ + ++ RT + L + D++ +QE+ +V Sbjct: 1 MRLISWNVQW----GRSAHGDVNLTRTLDEARRLVDF------DVLCMQEVTRGFSVLAG 50 Query: 84 FPKNTWCIFYSTERLINHSKRDSNND-------------IHTAIAVRKKNVRVLQQSYPL 130 P + + D A+ + + L Sbjct: 51 HPGDDQFAEIADALPGFTVLEAIGADLPALKLDAPAAPRRQFGNAIATRLPVERVIRHSL 110 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 D + + R A+E ++ G + V+ HL+ + SL+ + L Q + Sbjct: 111 PWPVDPEAPSMQRVALEAVLRAPGGSVRVIVTHLEFY----SLKQRLAQVDRLRQLQQEA 166 Query: 191 L---------KDWITQKKESLVPF--VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 ++ I ++ P V+ GDFN + + +P Sbjct: 167 AGHAAHPVPAENAIGPFADTGRPVSAVVCGDFNSAYDSEAYRRMLEPLEGSPSFIDAWPT 226 Query: 240 EKDSRCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + D+ + ++ L + R Sbjct: 227 LHPGQTPPMTAGVFDKVQWADGPLTCDFVFVTEDLRMRLRRCEV-----------DGATR 275 Query: 292 LSDHCPISIDY 302 SDH PI ++ Sbjct: 276 ASDHQPILVEL 286 >gi|47208868|emb|CAG06321.1| unnamed protein product [Tetraodon nigroviridis] Length = 441 Score = 93.1 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 40/282 (14%), Positives = 79/282 (28%), Gaps = 11/282 (3%) Query: 24 VRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NA 79 +R++ WNI L E ++G L+ + DI+ LQE+ Y + Sbjct: 149 IRIMQWNILAQALGEGKDGFIRCPLDALNWPERKYLILEEILTYLPDILCLQEVDHYYDT 208 Query: 80 VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + F + +N A+ R+ + L A + Sbjct: 209 FQPIMASLGYHGTFLAKPWSPCLDIEQNNGPDGCALFFRRSRFSLQATERLRLSAMMLPT 268 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 L G+++ V HLK+ + L + Q+ + Sbjct: 269 N-QVAIVQMLTCRPTGRRLCVAVTHLKARSGWERLRSAQGADFLQKLQRMISQNGGQRRA 327 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-----PKEKDSRCNANKNLRN 253 +P V+ GDFN + + + + + + + Sbjct: 328 MSGSIPLVVCGDFNAEPTEDVYKRFSSSPLGLSSAYKLLSSDKQTEPAYTTWKIRPSGEC 387 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +DY ++ D SDH Sbjct: 388 RSTLDYIWYTGDSLSVEQLLDIPTEEQIGPDRLPSYHYPSDH 429 >gi|188533711|ref|YP_001907508.1| Exodeoxyribonuclease III [Erwinia tasmaniensis Et1/99] gi|188028753|emb|CAO96615.1| Exodeoxyribonuclease III [Erwinia tasmaniensis Et1/99] Length = 268 Score = 93.1 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 84/311 (27%), Gaps = 75/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L+ + D++ LQE + Sbjct: 1 MKFVSFNINGL----------------RARPHQLQAIVEQHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + H +A+ K + + +D+ R Sbjct: 42 FP-------LEEVASLGYHVFYHGQKGHYGVAMLCKQQPIAVRRGFEGDDEDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + I VL+ F + + + L+ ++ Q++++ Sbjct: 90 RIIMADIPTSDGVITVLN-----GYFPQGESRDHPTKFPAKEKFYRDLQSYLEQQQKADN 144 Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 VI GD N + + + ++ + Sbjct: 145 QVVIMGDMNISSSDLDIGIGEVNRKRWLRTGKCSFLPEEREWMDRLMNWGLVDTWRAQNA 204 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + + ID + + + D ++ Sbjct: 205 EVN-DRFSWFDYRSKGFDDNRGLRIDLILASRPLAGRCVATGI-------DYDIRAMEKP 256 Query: 293 SDHCPISIDYD 303 SDH PI + Sbjct: 257 SDHAPIWAQFS 267 >gi|171463432|ref|YP_001797545.1| exodeoxyribonuclease III Xth [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192970|gb|ACB43931.1| exodeoxyribonuclease III Xth [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 288 Score = 93.1 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 84/310 (27%), Gaps = 60/310 (19%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMG--SY 77 VR+ +WN+N+L R L+ D + LQE+ Sbjct: 2 TDSVRIAAWNVNSL------------KVRLPQVLRWLQDQENKRQPIDALCLQELKLTDD 49 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 K + + ++ + I A S+ Sbjct: 50 KYPHKELEDAGYLSLAAGQKT------YNGVAIIVRKAALAPIASDTATSFLKPIRNIPN 103 Query: 138 SRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + +R + + G + ++ + + DS + Y + L W+ Sbjct: 104 FKDEQQRILAATIPFAGTPAMRLVSAYFPNGQSPDSDKFVYK------LGWLKALHTWLG 157 Query: 197 QKKESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEK 241 ++ E+ + GDFN + ++ + F + Sbjct: 158 EELENNSRLALLGDFNIAPADEDVHDSKVWEGQSLVSPPEREAFQGLIKLGLNDSFRMFE 217 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + ++ ID+ ++ + I + D ++ Sbjct: 218 QAP-KVFSWWDYRMMGFRRNAGMRIDHILLSEALKDQCIASTV-------DKEPRTWEQP 269 Query: 293 SDHCPISIDY 302 SDH P+ ++ Sbjct: 270 SDHAPVIAEF 279 >gi|290956326|ref|YP_003487508.1| exonuclease [Streptomyces scabiei 87.22] gi|260645852|emb|CBG68943.1| putative exonuclease [Streptomyces scabiei 87.22] Length = 259 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 82/304 (26%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N T+ L + ++ D++ LQE Sbjct: 1 MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCLQEA---KIAEDG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + R + +AV + L G R Sbjct: 42 FPLD-------ALREAGYEAAVHATGRWNGVAVISRVGIEDVVKG-LPGDPGYDGSVEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + +D Y Q + LK + Sbjct: 94 A-----ISATCGPVRVWSVYVPNGREVDHPHYAYK------LQWFEALKAAVAGDAAGSR 142 Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF + GD+N D ++ P+ + Sbjct: 143 PFAVMGDYNVAPTDDDVYDVAAFEGLTHVTPAERAALASLREAGLTDVVPRPLKYE-HPF 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID V + + +S+ D + +GK SDH P+ Sbjct: 202 TYWDYRQLCFPKNRGMRID-LVYGNETFAKAVTDSY------VDREERKGKGASDHAPVV 254 Query: 300 IDYD 303 +D + Sbjct: 255 VDLE 258 >gi|126729725|ref|ZP_01745538.1| exodeoxyribonuclease III [Sagittula stellata E-37] gi|126709844|gb|EBA08897.1| exodeoxyribonuclease III [Sagittula stellata E-37] Length = 260 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 83/302 (27%), Gaps = 67/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + L + ++ + D+V QE+ S Sbjct: 1 MKIATFNING----------------IKARIGALSDWLQSANPDVVLAQEIKS------- 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 +N + ++ +A+ K D +R Sbjct: 38 VDENFPREHFEDM---GYAVETHGQKGFNGVAILSKLPLEDVSRGLPGDPDDEQARW--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E V + + + ++L + + Y + + L Q S + Sbjct: 92 --IEATVMGDTTAVRLCGLYLPNGNPAPGPKYDYKLA------WMERLHTRAEQLLASEM 143 Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249 P V+AGD+N + + + N + + Sbjct: 144 PAVMAGDYNVIPQAEDAAKPDAWTDDALFLPQTRQAFRRIVNLGFTEAFRARTQGPGHYS 203 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A L + + ++ SDH P+ Sbjct: 204 FWDYQANSWQRNNGIRIDHLLLTPQAADLLNDCWIEKDV-------RAAEKPSDHVPVWC 256 Query: 301 DY 302 D Sbjct: 257 DL 258 >gi|54302910|ref|YP_132903.1| hypothetical protein PBPRB1231 [Photobacterium profundum SS9] gi|46916334|emb|CAG23103.1| hypothetical protein PBPRB1231 [Photobacterium profundum SS9] Length = 357 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 37/336 (11%), Positives = 92/336 (27%), Gaps = 55/336 (16%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + +++ ++N+ E ++ + +Y D++ QE+ S Sbjct: 19 SDTIKIATFNLFNYLEPPFAFYDFERIYTAEQWQKKQNWIAEYLIEYKPDVIGFQEVFSP 78 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAK 134 ++ + + + ++ AIA R + + Sbjct: 79 ESLKILVAAHGY-GYFEVVDEAEVIDDFICRSPVVAIASRYPITHIEAVVPDKELAVSMG 137 Query: 135 DSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ------- 186 +R+ + +E+ + +H KS + EN + + Sbjct: 138 LKDDFTFSRQPLRATIELPHIGECDCYVVHFKSKRPMIEHENNDNDESRTQTIIQTLKAE 197 Query: 187 --------------QAQWLKDWITQKKESLVPFVIAGDFNRKIN---------------Y 217 A L I +++++ +P ++ GDFN ++ Sbjct: 198 VTGSWGSSIQRGSEAALLLMSIIERREKTGLPMMLMGDFNDSLSDGVLAHLLTGSLRFIS 257 Query: 218 LGNNDDFWK--TIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDYFVMDQNAYKFLIQ 272 +D + L + + K +DY ++ Sbjct: 258 ESESDVILAKYRLKDTWDLYQATDNCAEMAHRTPTHYYGMKKSVLDYILLSCEFDAQYHS 317 Query: 273 ESFSEILYNEDDI------KSRGKRLSDHCPISIDY 302 F ++ D R + +DH + I Sbjct: 318 SLFEVSEHDTYDRHLINPSFERDSQSTDHGIVCITL 353 >gi|323529504|ref|YP_004231656.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1001] gi|323386506|gb|ADX58596.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1001] Length = 269 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 79/304 (25%), Gaps = 70/304 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+ ++NIN S L Q+ + DIV LQE+ A Sbjct: 3 TLRIATFNING----------------IRSRQAALLQWLEREAPDIVCLQEL---KAADS 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP + R + +A+ K L+ L G +D Sbjct: 44 AFPAD-------ALRDAGYHAIWQGQSAWNGVAILSKGEPPLESRRGLPGFEDDTHSRYL 96 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 AV + V ++L + + Y + L D + S Sbjct: 97 EAAV--------GGLLVCCLYLPNGNPQPGPKFEYK------LKWFDHLIDHAAKLLRSG 142 Query: 203 VPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNA 247 P V+AGDFN + ++ + Sbjct: 143 HPVVLAGDFNVVPTDEDIYNPRSWLKDALLQPESRERYRRLVAQGWTDALRTHFGDERVY 202 Query: 248 NKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ + L D SDH P Sbjct: 203 TFWDYFRRHWDTNSGLRIDHILLSPDLAPRLRDAGV-------DRWVRGEPHASDHAPTW 255 Query: 300 IDYD 303 ++ D Sbjct: 256 VELD 259 >gi|260574689|ref|ZP_05842692.1| exodeoxyribonuclease III Xth [Rhodobacter sp. SW2] gi|259023106|gb|EEW26399.1| exodeoxyribonuclease III Xth [Rhodobacter sp. SW2] Length = 263 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 78/305 (25%), Gaps = 72/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +++ S+NIN + L + + D+V LQE+ Sbjct: 5 MKIASFNING----------------IKARIEALPAWLADAAPDVVVLQEIKSVDEGFPR 48 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +F + + +A+ K D +R Sbjct: 49 GLFEDLGYRV------------ETHGQKGFNGVAILSKLPLEDVTRGLPGDPTDEQARW- 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E V I + + V ++ + + Y +++ + Sbjct: 96 ----IEATV-IGARAVRVAGLYAPNGNPAPGPKYDYK------LGWMARMRERALGLLAT 144 Query: 202 LVPFVIAGDFNRKI---NYLGNNDDFWKTIDP-----------NDSLIRFPKEKDSRCNA 247 P V+AGD+N + + N + + Sbjct: 145 EEPVVLAGDYNVIPQAMDAAKPEAWLEDALYLPQSRAALQRIVNLGYADAFRLRHPGPGH 204 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ A L D G + SDH P+ Sbjct: 205 YSFWDYQAGAWERNNGIRIDHLLLSPQASDLLRDAGI-------DKAVRAGDKPSDHVPV 257 Query: 299 SIDYD 303 ID D Sbjct: 258 WIDLD 262 >gi|170693030|ref|ZP_02884191.1| Endonuclease/exonuclease/phosphatase [Burkholderia graminis C4D1M] gi|170142028|gb|EDT10195.1| Endonuclease/exonuclease/phosphatase [Burkholderia graminis C4D1M] Length = 292 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 83/315 (26%), Gaps = 60/315 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 +RLV WNI +G D + + A+ L D DI+ +QE+ Sbjct: 1 MRLVDWNIQWGRGVDG-----------RVDLARIVREARALCDFDIMCMQEVTRGFHEPQ 49 Query: 75 --------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH--TAIAVRKKNVRVL 124 S + A++ A+ + Sbjct: 50 QMGGLAGGPSADQFAELAALLPGMTVTDAIGSDLPGVGVGGGKQRRQFGNAIVTRLPVRQ 109 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + L D + R A+E +++ + + V+ HL+ + ++ L Sbjct: 110 VLRHSLPWPADPAKPSMLRVALEAVIDTDVGPLRVISTHLEFYS--ETQRLAQVERLREL 167 Query: 185 SQQAQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 Q+A + ++ PF ++ GDFN Sbjct: 168 HQEACGHARRPARAEKQDSPFADSGRPMNAIVCGDFNSAFESAAYRKMLEPIAGAPAFAD 227 Query: 236 RFPKEKDSRCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + A D+ + ++ + Sbjct: 228 ACTLAHGNDARAATVGLYDREQWPDGPFACDFVFVTEDLAPRVACCEV-----------D 276 Query: 288 RGKRLSDHCPISIDY 302 R SDH P+ ++ Sbjct: 277 AHSRSSDHQPMWLEL 291 >gi|327538548|gb|EGF25210.1| endonuclease/exonuclease/phosphatase family protein [Rhodopirellula baltica WH47] Length = 279 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 90/309 (29%), Gaps = 54/309 (17%) Query: 1 MIRK----YVLALVFFLVPCTASVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDY 54 M++ ++ LV F A+ VR+ + +NI+ + D Sbjct: 16 MMKGCGLVWLAGLVMFFGTGVLRAAEPVRVRVLCYNIHHGEGVDR-----------KLDL 64 Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 + + ++++ D+V LQE+ + + + + + H Sbjct: 65 ERIAKVIQSVEPDLVTLQEVDQNASRSGSVDQPAELARLTGM-QVAFGPNIPLQGGHYGN 123 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 A+ K ++ L F R + + I G+ +L + Sbjct: 124 ALLSKYPIANHRNELLPN----FDNGEQRGVLSAELTIPGRNQPLLLLATHL-------- 171 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 A+ + ++ + P ++AGD N +N ++ Sbjct: 172 -DSRRDDRERIASAKAINRIVS--ETPRRPALLAGDMNDVLNSP----------TLDELE 218 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + + + + ID+ + + LI+ + SD Sbjct: 219 TMWTRVNEQVMPTIPVANPRRQIDFILFRPSNSWKLIEVKVLDEAV-----------ASD 267 Query: 295 HCPISIDYD 303 H I + Sbjct: 268 HRAIFAVLE 276 >gi|301310113|ref|ZP_07216052.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] gi|300831687|gb|EFK62318.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] Length = 353 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 85/297 (28%), Gaps = 66/297 (22%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + V+++++N+N + + + + D DIV LQE +A+ Sbjct: 98 EAVKVITYNVNNFNTDG------------KKQLPNIADWLRKEDPDIVCLQECPVESALR 145 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 T + +K A+ K + +S + + Sbjct: 146 MDSLAKTLSFLPYYCSTRSATKAA-------GNAIFSKYPILRFESILYPESSNKS---- 194 Query: 142 NRRAVELLVEINGKKIWVLDIHLK-----------SFCFLDSLENTYSPSCSLLSQQAQ- 189 + +++I G + V + H + + + + + ++ Q + Sbjct: 195 ----LFAVMDIQGDSVRVFNNHFQTTSVNAVKPRLYQAHAEGKQLEETEAAFHMAFQMKK 250 Query: 190 ------WLKDWITQKKESLV-PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 D+I Q ++ P ++ GDFN D F Sbjct: 251 NFVKRATQADYIRQMLDAGEGPVILCGDFNDTPASYTYRTV------KGDLTDGFRDCGS 304 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + L+ IDY + + + S SDH P+ Sbjct: 305 GFGYTFRQLKRIFRIDYIIYSPD--------------FKGVTYDSPNLDYSDHKPVV 347 >gi|256840117|ref|ZP_05545626.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256739047|gb|EEU52372.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 353 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 39/297 (13%), Positives = 85/297 (28%), Gaps = 66/297 (22%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + V+++++N+N + + + + D DIV LQE +A+ Sbjct: 98 EAVKVITYNVNNFNTDG------------KKQLPNIADWLRKEDPDIVCLQECPVESALR 145 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 T + + + A+ K + +S + + Sbjct: 146 -------MDSVAKTLSFLPYYCSTRSATKAAGNAIFSKYPILRFESILYPESSNKS---- 194 Query: 142 NRRAVELLVEINGKKIWVLDIHLK-----------SFCFLDSLENTYSPSCSLLSQQAQ- 189 + +++I G + V + H + + + + + ++ Q + Sbjct: 195 ----LFAVMDIQGDSVRVFNNHFQTTSVNAVKPRLYQAHAEGKQLEETEAAFHMAFQMKK 250 Query: 190 ------WLKDWITQKKESLV-PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 D+I Q ++ P ++ GDFN D F Sbjct: 251 NFVKRATQADYIRQMLDAGEGPVILCGDFNDTPASYTYRTV------KGDLTDGFRDCGS 304 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + L+ IDY + + + S SDH P+ Sbjct: 305 GFGYTFRQLKRIFRIDYIIYSPD--------------FKGVTYDSPNLDYSDHKPVV 347 >gi|254454283|ref|ZP_05067720.1| exodeoxyribonuclease III [Octadecabacter antarcticus 238] gi|198268689|gb|EDY92959.1| exodeoxyribonuclease III [Octadecabacter antarcticus 238] Length = 266 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 87/308 (28%), Gaps = 71/308 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + L + + D+ LQE+ S V + Sbjct: 1 MKIATFNING----------------VKARIGALTDWLEASKPDVALLQEIKS---VDEG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS---YPLLGAKDSFSRA 140 FP+ + + ++ +A+ K P +D Sbjct: 42 FPREH-------IQDLGYTVETHGQKGFNGVAILSKLPLEDVTRGLPDPEGAGRDGEDDI 94 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R ++ K I + ++L + + Y LK +Q E Sbjct: 95 EARYIEATVM--GEKAIRICGLYLPNGNPAPGPKYDYK------LHWMDRLKARASQLIE 146 Query: 201 SLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 PF+IAGD+N + F + ++ L + Sbjct: 147 LEEPFLIAGDYNIIPQPEDAARPDVWADDALFRPDSRAAFRRLLNLG--LTEAFRACHQG 204 Query: 245 CNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + ID+F++ L + ++ SDH Sbjct: 205 SGHYSFWDYQAGAWDKNDGIRIDHFLLSNQCADLLKDCWIESDV-------RGREKPSDH 257 Query: 296 CPISIDYD 303 P+ ++ D Sbjct: 258 VPVWVELD 265 >gi|170764194|ref|ZP_02634166.2| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens E str. JGS1987] gi|170660566|gb|EDT13249.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens E str. JGS1987] Length = 262 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 44/291 (15%), Positives = 93/291 (31%), Gaps = 45/291 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+ + + + W + + + K+ DI+ QE + Sbjct: 4 LKVMTFNLKYDFKAQDNNEW-------SQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMD 56 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAKDSF 137 + + + + + D AI K VL+ P + F Sbjct: 57 DLLDEYS-------WVGEDREGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDF 109 Query: 138 SRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + + R +L + +I+G KI + + HL E ++ ++ + Sbjct: 110 NSSLPRICTKLKLKDKISGLKIDIYNTHL-----DHESELAREEGIKIILKEVK------ 158 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP--KEKDSRCNANKNLRN 253 K P++I GDFN + N + + + + K Sbjct: 159 KNYKIYKTPYIIMGDFNCYLEDNLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY 218 Query: 254 KIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY + + + N DD K SDH P+ + + Sbjct: 219 DGRIIDYILYSKE---------YEIKSLNIDDRKINRGYPSDHYPVICELE 260 >gi|172060778|ref|YP_001808430.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MC40-6] gi|171993295|gb|ACB64214.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MC40-6] Length = 284 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 38/308 (12%), Positives = 84/308 (27%), Gaps = 52/308 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 +RL+ WN+ + +GV D A++L D D++ +QE+ Sbjct: 1 MRLIDWNVQWGRDADGV-----------VDLARTIAAARSLGDFDVLCMQEVTRGFGALP 49 Query: 75 --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + ++ + A+ + L Sbjct: 50 GQPGPDQFTELAALLPGYTIFEAIGADLPPLEPDAARRQFGNAIATRLPVGRVLRQLLPW 109 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 D+ + R A+E+ + + ++ HL+ + + ++A Sbjct: 110 PADAGEPSMPRVALEVELTTPSGALRIITTHLEFYSARQ--RLAQVDALRARHREACAHA 167 Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 D + + PF +I GDFN + D + + Sbjct: 168 DQPAPAENATGPFTATGQARDAIICGDFNSAFDSDAYRRLLEPIADAPSFVDAWVGRHQG 227 Query: 244 RC--------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + + D+ + + + R SDH Sbjct: 228 HTPPPTAGVYDTAQWSDGPLACDFVFVTDTLLPRVTRCEI-----------DGDVRASDH 276 Query: 296 CPISIDYD 303 P+ ++ D Sbjct: 277 QPVVLEVD 284 >gi|315503070|ref|YP_004081957.1| exodeoxyribonuclease iii xth [Micromonospora sp. L5] gi|315409689|gb|ADU07806.1| exodeoxyribonuclease III Xth [Micromonospora sp. L5] Length = 265 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 74/301 (24%), Gaps = 69/301 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N + L + D+V LQE + Sbjct: 1 MRLATWNVN----------------SVKARLPRLLDWLATTKPDVVCLQETKCPDGA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + ++ +AV + + F R Sbjct: 42 -------FPVAEVGELGYEVASHSDGRWNGVAVLSRVGLADVTVG--FPGEPGFPEPEAR 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ V +++ + D Y + L+D + + + Sbjct: 93 A-----ISATCDELRVWSVYVPNGRAPDDPHYAYKLA------WFAALRDALESEVAGAL 141 Query: 204 PFVIAGDFNRKINYLGNNDDFW--------------KTIDPNDSLIRFPKEKDSRCNANK 249 P + GDFN D + L + Sbjct: 142 PVAVCGDFNVAPTDADVWDPALFVTSTHVTPAERAALAALRDLGLEDVVPTPMKGPHPFT 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + ID + + D +GK SDH PI + Sbjct: 202 YWDYRAGMFHQNKGMRIDLVYASASFARA-------VRSAYVDREARKGKGPSDHAPIVV 254 Query: 301 D 301 D Sbjct: 255 D 255 >gi|153836353|ref|ZP_01989020.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AQ3810] gi|149750255|gb|EDM61000.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AQ3810] Length = 317 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 101/314 (32%), Gaps = 30/314 (9%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 S ++ V+ N+ S ++ + + L+ DI+ LQE+ Sbjct: 2 SQPSRITFVTANLFNFVAPPNAYYDFENIYSQEQWRDKLAWTQNQLEKLEPDIIGLQEVF 61 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLG 132 S F + +++T + AIA R V + L Sbjct: 62 SIEETRTYFLSLGFP-YFATVDTPKIEDEYIYSRPVVAIASRFPIEDVKPVEFDSNSLTP 120 Query: 133 AKDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLD-------SLENTYSPSCSLL 184 + + +R+ + +V I + HLKS D S S Sbjct: 121 FGVNEAPDFSRKPIYAQVVHPVLGHIAIYVTHLKSQRPADTETPEPSSRVMARWLSTQQR 180 Query: 185 SQQAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 +A L+D + Q + +P V+ GD N+ I+ N+ +T + + ++ + Sbjct: 181 GWEAAMLRDAMQAQYRAHPIPTVLMGDMNQPISKKSVNNVLTETFSDSVTELQLKDGWNL 240 Query: 244 RCN--------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRG 289 + + + +DY ++ Q I Y + + Sbjct: 241 QTGSSLEIRPATHYHFSTGNVLDYILLSQEFDTHSDVSVAEVIDYQVLEQHLINPSYEKD 300 Query: 290 KRLSDHCPISIDYD 303 K SDH +S+ + Sbjct: 301 KNASDHAFVSLTVE 314 >gi|148379451|ref|YP_001253992.1| exodeoxyribonuclease III [Clostridium botulinum A str. ATCC 3502] gi|153934303|ref|YP_001383830.1| exodeoxyribonuclease III [Clostridium botulinum A str. ATCC 19397] gi|153935156|ref|YP_001387380.1| exodeoxyribonuclease III [Clostridium botulinum A str. Hall] gi|148288935|emb|CAL83022.1| putative exodeoxyribonuclease [Clostridium botulinum A str. ATCC 3502] gi|152930347|gb|ABS35847.1| exodeoxyribonuclease III [Clostridium botulinum A str. ATCC 19397] gi|152931070|gb|ABS36569.1| exodeoxyribonuclease III [Clostridium botulinum A str. Hall] Length = 253 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 82/304 (26%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ SWN+N L + ++ DI+ +QE + Sbjct: 1 MRIYSWNVNGLRAVAKKNF---------------IEWIGEESPDILCIQETKLQENQLED 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + ++S + ++ +A K + + + DS R Sbjct: 46 NIKNIDGYYSYFS----------FAVKKGYSGVATYTKVKPISVKHSIGIEKFDSEGRI- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + K +L+I+ + + + L ++ + + Sbjct: 95 --------LITGFKDFTLLNIYFPNGQRDEER-------LQYKLDFYEALFNYCDELVKE 139 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKT-------IDPNDSLIRFPKEKDSRCNA------- 247 VI GD+N N + + I+ + + Sbjct: 140 GKKLVICGDYNTAHNEIDLKNPKANEKTSGFLRIERDWLDKIIERGYTDTFRNMNPDKIK 199 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY + N + +Y SDHCP+ Sbjct: 200 YSWWSYRFKARERNAGWRIDYHFVSNNLLDRVENTEILNEVY-----------GSDHCPV 248 Query: 299 SIDY 302 ++ Sbjct: 249 MLEL 252 >gi|116691907|ref|YP_837440.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia HI2424] gi|116649907|gb|ABK10547.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia HI2424] Length = 599 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 83/315 (26%), Gaps = 47/315 (14%) Query: 23 KVRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEM 74 VR+VS+N+ N + + R + + L AD++ L E+ Sbjct: 277 DVRIVSFNVFNYFNGDGHGGGFDAPGNRGAKTPAAFARQEAKIVASLRALRADVIGLMEI 336 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + R ++ R + I A+ + V + ++ + Sbjct: 337 ANNGHGDTSAIRRLAAQLGDGWRAVDPGTARLGRDAIAVALLYDSRTVEPVGRAVTVALG 396 Query: 134 KDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ----- 186 R + + V HLKS + S Sbjct: 397 GRH------RPPLAQTFRRIDGTRTFTVAVNHLKSKNCPHASGANLDQSDGQGCWNAART 450 Query: 187 -QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 A + DW+ + ++ GD N +T++ + Sbjct: 451 RAAARVADWLATSPTGIAADGVLLIGDLNSYAKEDP-----LRTLEARGYANLVVRFVGD 505 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK----------------- 286 + +D+ + + F I +E + Sbjct: 506 AAYSYVFRGEAGNLDHALATPALAARVKAVRFWHINADEPVVLQPVPDYKTSAQRSAYYA 565 Query: 287 SRGKRLSDHCPISID 301 R SDH P+ ID Sbjct: 566 PDAYRSSDHDPVVID 580 >gi|332708957|ref|ZP_08428928.1| exodeoxyribonuclease III [Lyngbya majuscula 3L] gi|332352499|gb|EGJ32068.1| exodeoxyribonuclease III [Lyngbya majuscula 3L] Length = 262 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 36/308 (11%), Positives = 90/308 (29%), Gaps = 75/308 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ +WN+N S + + + D++ LQE + Sbjct: 1 MKIATWNVN----------------SIRSRQAQVIDWLQRTQVDVLCLQETKVVDAQFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ--SYPLLGAKDSFSR 139 +F + + ++ S + +A+ + +L Sbjct: 45 SLFEELGYYLYIS------------GQKSYNGVAIFSRKPATDVSMGFAAVLDTAQVGDL 92 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 +R + V+ + ++++++ + ++S + Y + + L+D++ Sbjct: 93 DEQKRVISATVD----GVRIVNLYVPNGASVNSEKYDYK------LRWLKILRDYLHSIL 142 Query: 200 ESLVP-FVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDS 243 E + GDFN + + +++ F K Sbjct: 143 EEQSHELCVCGDFNIALEDRDIHNPKGKEKHIMASPVERQALQSVLDLGLGDAFRKFTKE 202 Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 N + ID+ + N Y I + D + SD Sbjct: 203 GGN-FSWWDYRTRAFRGNRGWRIDHIYLTPNLYNQAISCTIDIEPRKLD-------KPSD 254 Query: 295 HCPISIDY 302 H P+ ++ Sbjct: 255 HSPVIVNL 262 >gi|169342361|ref|ZP_02863427.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens C str. JGS1495] gi|169299481|gb|EDS81545.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens C str. JGS1495] Length = 262 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 97/296 (32%), Gaps = 55/296 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+ + + + W + + + K+ DI+ QE + Sbjct: 4 LKVMTFNLKYDFKAQDNNEW-------SQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMD 56 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAKDSF 137 + + + + + D AI K VL+ P + F Sbjct: 57 DLLDEYS-------WVGEDREGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDF 109 Query: 138 SRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + + R +L + +I+G KI + + HL E ++ ++ + Sbjct: 110 NSSLPRICTKLKLKDKISGLKIDIYNTHL-----DHESELAREEGIKIILKEVK------ 158 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS--------LIRFPKEKDSRCNA 247 K P++I GDFN + D+ + I ++ + Sbjct: 159 KNYKIYKTPYIIMGDFNCYL-----EDNLFNIIREEETNNTCFNVCYDNIKNNILGTFHY 213 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K + IDY + + + N DD K G SDH P+ + + Sbjct: 214 FKGGYDGKIIDYILYSKE---------YEIKSLNIDDRKIDGGYPSDHYPVICELE 260 >gi|224500776|ref|ZP_03669125.1| hypothetical protein LmonF1_14336 [Listeria monocytogenes Finland 1988] gi|254829588|ref|ZP_05234275.1| exodeoxyribonuclease [Listeria monocytogenes FSL N3-165] gi|284802226|ref|YP_003414091.1| hypothetical protein LM5578_1982 [Listeria monocytogenes 08-5578] gi|284995368|ref|YP_003417136.1| hypothetical protein LM5923_1933 [Listeria monocytogenes 08-5923] gi|258602005|gb|EEW15330.1| exodeoxyribonuclease [Listeria monocytogenes FSL N3-165] gi|284057788|gb|ADB68729.1| hypothetical protein LM5578_1982 [Listeria monocytogenes 08-5578] gi|284060835|gb|ADB71774.1| hypothetical protein LM5923_1933 [Listeria monocytogenes 08-5923] Length = 251 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 86/305 (28%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL+SWN+N L +Y + +DADI LQE Sbjct: 1 MRLISWNVNGLRAAVKKGF---------------LEYFEEVDADIFCLQETKLQEG-QIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + Q + D+ R Sbjct: 45 LDLPAYKDYWN----------YAVKKGYSGTAIFTKVEPLSVQYGLGIPEHDTEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++ +++ ++ + + +++ ++ Sbjct: 91 -----VITLEFEEFFMVTVYTPN-------SQAELKRLDYRMTFEDAILEYVK-NLDNTK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + F +A Sbjct: 138 PVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + L+ + SDHCP+ Sbjct: 198 SWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVL-----------GSDHCPVE 246 Query: 300 IDYDF 304 ++ +F Sbjct: 247 LELNF 251 >gi|107026896|ref|YP_624407.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU 1054] gi|105896270|gb|ABF79434.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU 1054] Length = 620 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 83/315 (26%), Gaps = 47/315 (14%) Query: 23 KVRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEM 74 VR+VS+N+ N + + R + + L AD++ L E+ Sbjct: 298 DVRIVSFNVFNYFNGDGHGGGFDAPGNRGAKTPAAFARQEAKIVASLRALRADVIGLMEI 357 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + R ++ R + I A+ + V + ++ + Sbjct: 358 ANNGHGDTSAIRRLAAQLGDGWRAVDPGTARLGRDAIAVALLYDSRTVEPVGRAVTVALG 417 Query: 134 KDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ----- 186 R + + V HLKS + S Sbjct: 418 GRH------RPPLAQTFRRIDGTRTFTVAVNHLKSKNCPHASGANLDQSDGQGCWNAART 471 Query: 187 -QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 A + DW+ + ++ GD N +T++ + Sbjct: 472 RAAARVADWLATSPTGIAADGVLLIGDLNSYAKEDP-----LRTLEARGYANLVVRFVGD 526 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK----------------- 286 + +D+ + + F I +E + Sbjct: 527 AAYSYVFRGEAGNLDHALATPALAARVKAVRFWHINADEPVVLQPVPDYKTSAQRSAYYA 586 Query: 287 SRGKRLSDHCPISID 301 R SDH P+ ID Sbjct: 587 PDAYRSSDHDPVVID 601 >gi|90414419|ref|ZP_01222396.1| hypothetical protein P3TCK_10118 [Photobacterium profundum 3TCK] gi|90324532|gb|EAS41088.1| hypothetical protein P3TCK_10118 [Photobacterium profundum 3TCK] Length = 357 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 39/342 (11%), Positives = 93/342 (27%), Gaps = 55/342 (16%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFL 71 T +++ +++ ++N+ E ++ + +Y D++ Sbjct: 13 AITQTLSDTIKIATFNLFNYLEPPFAFYDFERIYTAEQWQKKQNWIAEYLIEYKPDVIGF 72 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ---SY 128 QE+ S ++ + + F + AIA R + Sbjct: 73 QEVFSPESLKNLVAAQGYAYFEVVDEAEVIDD-FICRSPVVAIASRYPITHIEAVIPDEE 131 Query: 129 PLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ- 186 + +R+ + +E+ + +H KS + EN+ + Sbjct: 132 LAVAMGLKNDFTFSRQPLLATIELPHIGECDCYVVHFKSKRPMIEHENSSHDESRTQTII 191 Query: 187 --------------------QAQWLKDWITQKKESLVPFVIAGDFNRKIN---------- 216 A L I +++++ +P ++ GDFN ++ Sbjct: 192 QTLKAEVTGSWGSSIQRGSEAALLLMSIIERREKTGLPMMLMGDFNDSLSDGVLAHLLTS 251 Query: 217 -----YLGNNDDFWK--TIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDYFVMDQNA 266 +D + L + K +DY ++ Sbjct: 252 SLRFISESESDVILAKYRLKDAWDLYQATDNCPEMAYRTPTHYYGMKKSILDYILLSCEF 311 Query: 267 YKFLIQESFSEILYNEDDI------KSRGKRLSDHCPISIDY 302 F ++ D R + +DH + I Sbjct: 312 DAQYHSSLFEISEHDTYDRHLINPSFERDSQSTDHGIVCITL 353 >gi|9885288|gb|AAG01389.1|AF199494_1 nocturnin [Homo sapiens] Length = 278 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 35/277 (12%), Positives = 83/277 (29%), Gaps = 19/277 (6%) Query: 36 EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAVAKVFPKNTWCIFYS 94 ++ + L+ + DI+ LQE+ Y + + + + + Sbjct: 5 GKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHYFDTFQPLLSRLGYQGTFF 64 Query: 95 TERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153 + +N A+ + +++ + L A + A L + + Sbjct: 65 PKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVT-IAQTLECKES 123 Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWLKDWITQKKESLVPFVIAGDFN 212 G++ + HLK+ + S Q L++ + + +P ++ GDFN Sbjct: 124 GRQFCIAVTHLKA----------RTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFN 173 Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-----KIPIDYFVMDQNAY 267 + +++ N + + S + +DY ++A Sbjct: 174 AEPTEEVYKHFASSSLNLNSAYKLLSADGQSEPPYTTWKIRTSGECRHTLDYIWYSKHAL 233 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + SDH + D+ F Sbjct: 234 NVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 270 >gi|307128824|ref|YP_003880840.1| metal-dependent hydrolase [Dickeya dadantii 3937] gi|306526353|gb|ADM96283.1| Metal-dependent hydrolase [Dickeya dadantii 3937] Length = 287 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 88/312 (28%), Gaps = 63/312 (20%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----------G 75 +VS+NI ++G D + + ADI+ +QE+ Sbjct: 3 IVSYNIQYGLGRDG-----------RYDLARIADEVR--GADIICMQEVERFWQRSGMMD 49 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINH---SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 +A + + W + + + R N + + +++PL Sbjct: 50 QPAELAALLGEYHWVYGANLDMDASTVSADGRVVNRRRQFGTLTLSRRPILSSRNFPLPK 109 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + + +E +++ I + + HL C ++L+ A+ Sbjct: 110 FGTLTQHSIQQGVLETVIDTGAGAIRIYNTHLSHLCAGT----RLPQVEAMLALFARAPD 165 Query: 193 DWITQKKESLVP---------------FVIAGDFNRKINYLGNNDDFW-------KTIDP 230 + P ++ GD N + + + + Sbjct: 166 EGGAWCGGHPDPSAGWTEGRMPLMPLEMILMGDLNCLPDSEEYSRLVGPVSPHHGRLVRH 225 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + + + + ID+ ++ + + + Sbjct: 226 RGLMDAWVAAGQPESSGSTHPSVGGRIDHCLLTPSLGLTVRRCWADTEN----------- 274 Query: 291 RLSDHCPISIDY 302 + SDH P+ ++ Sbjct: 275 QGSDHHPLWVEL 286 >gi|262381640|ref|ZP_06074778.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262296817|gb|EEY84747.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 353 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 85/297 (28%), Gaps = 66/297 (22%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + V+++++N+N + + + + D DIV LQE +A+ Sbjct: 98 EAVKVITYNVNNFNTDG------------KKQLPNIADWLRKEDPDIVCLQECPVESALR 145 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 T + + + A+ K + +S + + Sbjct: 146 -------MDSVAKTLSFLPYYCSTRSATKAAGNAIFSKYPILRFESILYPESSNKS---- 194 Query: 142 NRRAVELLVEINGKKIWVLDIHLK-----------SFCFLDSLENTYSPSCSLLSQQAQ- 189 + +++I G + V + H + + + + + ++ Q + Sbjct: 195 ----LFAVMDIQGDSVRVFNNHFQTTSVNAVKPRLYQAHAEGKQLEETEAAFHMAFQMKK 250 Query: 190 ------WLKDWITQKKESLV-PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 D+I Q ++ P +I GDFN D F Sbjct: 251 NFVKRATQADYIRQMLDAGEGPVIICGDFNDTPASYTYRTV------KGDLTDGFRDCGS 304 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + L+ IDY + + + S SDH P+ Sbjct: 305 GFGYTFRQLKRIFRIDYIIYSPD--------------FKGVTYDSPNLDYSDHKPVV 347 >gi|220911600|ref|YP_002486909.1| 5'-nucleotidase domain protein [Arthrobacter chlorophenolicus A6] gi|219858478|gb|ACL38820.1| 5'-Nucleotidase domain protein [Arthrobacter chlorophenolicus A6] Length = 1512 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 54/345 (15%), Positives = 98/345 (28%), Gaps = 62/345 (17%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWK-----------------------NSVKRTTS 52 A V V++ S+N+ G +L + + Sbjct: 504 APAPVGGNVKIASFNVLNYFPTTGDTLTGCTYYGDRAGNPITVRGGCDARGAANAENFQR 563 Query: 53 DYTLLRQYAKNLDADIVFLQEMGS--------YNAVAKV---FPKNTWCIFYSTERLINH 101 + AD+V L E+ + +A+AK+ T I+ N Sbjct: 564 QQDKIVAAITKTGADVVTLMEIENSAQFGKNRDDALAKLVEALNIPTPGIWDYVRSPANA 623 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI----NGKKI 157 + I TA +K + +S D+ + A R+ + + + G + Sbjct: 624 PPLADEDMIRTAFIYKKAVAEPVGESII---HNDTTAFASARKPLAQVFKPVGGGAGTEF 680 Query: 158 WVLDIHLKSFCF---LDSLENTYSPSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFN 212 + H KS D + S + QA+ L D+ T Q+ + + GDFN Sbjct: 681 IAIANHFKSKGSAATPDDTDKGQGNSNLARTAQAKSLLDFATSLQQSKGTDKVFLIGDFN 740 Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 N D + ++ +D+ + A + Sbjct: 741 SYGKEDPINVLTAAGYVNQDDKAKNADGSAK--HSYLFGGLVGSLDHILASPAANGVVTG 798 Query: 273 ESFSEILYNEDDIKSRGK--------------RLSDHCPISIDYD 303 I E + R SDH P+ + D Sbjct: 799 ADIWNINSVESVALEYSRYNNNVTNYYAPDQFRASDHDPVVVGLD 843 >gi|167563395|ref|ZP_02356311.1| exodeoxyribonuclease III [Burkholderia oklahomensis EO147] Length = 258 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 80/302 (26%), Gaps = 68/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+L+ + + D D++ LQE Sbjct: 1 MRIATWNVNSLN----------------VRKQHVLDWLAQSDVDVLCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ + S P + G Sbjct: 35 LKVPDEKFPRADLEAAGYRSWFTGQKTYNGVAILAR------ASLPFDETNVVRNIPGFE 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + L+ + ++ + + DS + Y Q L+ W+ + + Sbjct: 89 DAQQRLIAATIDGVRIVSAYFPNGQAPDSDKFVYK------MQWLDALQAWLKDEMQRYP 142 Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249 + GD+N +D + P + + D Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLLALGFVDAFRRFDQPEKTFT 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ D + ++ SDH P+ Sbjct: 203 WWDYRMLAFRRNAGLRIDHILLSPALADTCTSC-------MVDRVPRTWEQPSDHTPVVA 255 Query: 301 DY 302 Sbjct: 256 QI 257 >gi|293371502|ref|ZP_06617922.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|292633539|gb|EFF52102.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] Length = 296 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 81/288 (28%), Gaps = 47/288 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL S+NI T ++ + L + D+ +QE + + + Sbjct: 42 IRLASYNIRTKGDKGDKA--------WEVRLNALVDVVRRNKFDMFAIQEGRTSQ-LKDM 92 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKD----SFS 138 N + + N H AI +K +VL+ + D + Sbjct: 93 MILNEYSYI-------GRDRDGDNKGEHCAIYYKKDRFKVLKHGDFWYSETPDIPSYGWG 145 Query: 139 RAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R + +GKK +V + H S +L +Q + + Sbjct: 146 ARCRRICTWGYFKDLRSGKKFYVFNSHT-----DHEATEARRQSSFMLLEQVRKIAK--- 197 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI- 255 P GDFN + ++ + K + + Sbjct: 198 -----GRPTFCTGDFNATPDEEPVQLLLKDSLLLDSYKCTLTPPKGPSGSFYAYDKTGKT 252 Query: 256 --PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 ID+ + + DD K SDH P+ ++ Sbjct: 253 AKRIDFIFVTPKIKILS--------YHTIDDDIKYNKYSSDHFPVMVE 292 >gi|302866656|ref|YP_003835293.1| exodeoxyribonuclease III Xth [Micromonospora aurantiaca ATCC 27029] gi|302569515|gb|ADL45717.1| exodeoxyribonuclease III Xth [Micromonospora aurantiaca ATCC 27029] Length = 265 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 74/301 (24%), Gaps = 69/301 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N + L + D+V LQE + Sbjct: 1 MRLATWNVN----------------SVKARLPRLLDWLATTKPDVVCLQETKCPDGA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + ++ +AV + + F R Sbjct: 42 -------FPVAEVGELGYEVASHSDGRWNGVAVLSRVGLADVTVG--FPGEPGFPEPEAR 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ V +++ + D Y + L+D + + + Sbjct: 93 A-----ISATCDELRVWSVYVPNGRAPDDPHYAYKLA------WFAALRDALEPEVAGAL 141 Query: 204 PFVIAGDFNRKINYLGNNDDFW--------------KTIDPNDSLIRFPKEKDSRCNANK 249 P + GDFN D + L + Sbjct: 142 PVAVCGDFNVAPTDADVWDPALFVTSTHVTPAERAALAALRDLGLKDVVPTPMKGPHPFT 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + ID + + D +GK SDH PI + Sbjct: 202 YWDYRAGMFHQNKGMRIDLVYASASFARA-------VRSAYVDREARKGKGPSDHAPIVV 254 Query: 301 D 301 D Sbjct: 255 D 255 >gi|170736096|ref|YP_001777356.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia MC0-3] gi|169818284|gb|ACA92866.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia MC0-3] Length = 620 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 83/315 (26%), Gaps = 47/315 (14%) Query: 23 KVRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEM 74 VR+VS+N+ N + + R + + L AD++ L E+ Sbjct: 298 DVRIVSFNVFNYFNGDGHGGGFDAPGNRGAKTPAAFARQEAKIVASLRALRADVIGLMEI 357 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + R ++ R + I A+ + V + ++ + Sbjct: 358 ANNGHGDTSAIRRLAAQLGDGWRAVDPGTARLGRDAIAVALLYDSRTVEPVGRAVTVALG 417 Query: 134 KDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ----- 186 R + + V HLKS + S Sbjct: 418 GRH------RPPLAQTFRRIDGTRTFTVAVNHLKSKNCPHASGANLDQSDGQGCWNAART 471 Query: 187 -QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 A + DW+ + ++ GD N +T++ + Sbjct: 472 RAAARVADWLATSPTGIAADGVLLIGDLNSYAKEDP-----LRTLEARGYANLVVRFVGD 526 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK----------------- 286 + +D+ + + F I +E + Sbjct: 527 AAYSYVFRGEAGNLDHALATPALAARVKAVRFWHINADEPVVLQPVPDYKTSAQRSAYYA 586 Query: 287 SRGKRLSDHCPISID 301 R SDH P+ ID Sbjct: 587 PDAYRSSDHDPVVID 601 >gi|332284249|ref|YP_004416160.1| putative exodeoxyribonuclease III [Pusillimonas sp. T7-7] gi|330428202|gb|AEC19536.1| putative exodeoxyribonuclease III [Pusillimonas sp. T7-7] Length = 262 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 86/305 (28%), Gaps = 70/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N+L + + +N + + LQE+ + Sbjct: 1 MKLATWNVNSL----------------KVRLPQVLDWLENSPVEALCLQELKLTDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ K Q L G +D R Sbjct: 41 ------KFPIDAFTEAGYQACWAGQKTYNGVAIITKVPGTDIQRN-LPGFEDHQQR---- 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + V+ + + + S + Y + L++W+ Q+ + Sbjct: 90 -IIATTLPSPVGDVRVICAYCPNGQAVGSDKYEYK------LKWFLALQEWLEQELQRYP 142 Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 I GD+N + +D + + L +E + + Sbjct: 143 RLAILGDYNVAPHNDDVHDPKKWEGDVLVSEPERAAFNALLSLG-LTDSFREFEQEEKSF 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ + D ++ SDH P+ Sbjct: 202 TWWDYRRFAFRRNAGLRIDHVLLSDALKPYCSACVI-------DKAPRNNEQPSDHTPVI 254 Query: 300 IDYDF 304 DF Sbjct: 255 ATLDF 259 >gi|283778819|ref|YP_003369574.1| endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068] gi|283437272|gb|ADB15714.1| Endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068] Length = 517 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 42/295 (14%), Positives = 83/295 (28%), Gaps = 50/295 (16%) Query: 9 LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 ++ +P A +R++S+NI+ + D L + +++ D+ Sbjct: 264 IIVAKLPSQAVAPITLRVLSYNIHHGEGNDR-----------KLDLPRLAKIITSVNPDL 312 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 V LQE+ A + + + + AI R K R Sbjct: 313 VLLQEVDQNVARSGKVDQPKVLAELTKMEFCFGSNLALQGGGYGNAILSRYKIERHDNHL 372 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 P L R + + + G+ + + Y Sbjct: 373 LPSLDGG------EQRGVLVAEISLPGR---------APTLRVAATHFDYRGKEDERLAS 417 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 WL + + KE V ++ GD N +T+ + + E ++ Sbjct: 418 VAWLTEKL--VKEQTVATILGGDLNATRET--------ETLKKLGAHWKIAGETETPTIP 467 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ + + +++ E SDH PI Sbjct: 468 TDKPER--QIDFVLCRPDDAWEVVEVKVLEEPI-----------ASDHLPILAVL 509 >gi|237719046|ref|ZP_04549527.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|293371907|ref|ZP_06618311.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|229451824|gb|EEO57615.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|292633153|gb|EFF51730.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] Length = 257 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 42/301 (13%), Positives = 87/301 (28%), Gaps = 51/301 (16%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 K ++ + F ++ AQ ++++S+N + S + T + + Sbjct: 6 KPIVWVCLFFFAYQSTYAQALKIMSYN------------CRMSGQMTGYSVKEYAVFIRK 53 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 + D+V LQE+ K T + D+ + +A+ K V Sbjct: 54 YNPDVVMLQEIDYNTKRNKNQDFTTQLAAELGLFSVFGKAMDTGGGEY-GVAILSKYPFV 112 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + R + + ++ G V+ I L + Sbjct: 113 ---YINNKTFEGIDGAKEPRTLLYVDIQEPGTS-DVIRIGTTHLDHSTDL---------I 159 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 S A+ + + I P ++ GDFN + + + + Sbjct: 160 RSAMAEQINERIGT---GDTPTLLGGDFNARTDSNVICEVMKNW-----------QRICD 205 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + I IDY + SF + +SDH + + + Sbjct: 206 DTFTYPADQPTIKIDYIFGLPQNKWKVK--SFKVLS---------NPEVSDHRALFAEVE 254 Query: 304 F 304 F Sbjct: 255 F 255 >gi|126657241|ref|ZP_01728407.1| hypothetical protein CY0110_24971 [Cyanothece sp. CCY0110] gi|126621512|gb|EAZ92223.1| hypothetical protein CY0110_24971 [Cyanothece sp. CCY0110] Length = 652 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 38/328 (11%), Positives = 91/328 (27%), Gaps = 66/328 (20%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 V S K+ + + N+ L + L L+ K+ DI+ L E Sbjct: 109 VTNLLSGEDKLTVAAMNVENLDPGDSDRLNPLGK--------LIVNNLKS--PDIIVLTE 158 Query: 74 MGSYNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + + + + I + + +I Sbjct: 159 IQDNDGPNNSDITDGTETYNALIDAIEKADGPDY-IAFDIPPSDDKDGGQPGGNIRVGYL 217 Query: 116 VRKKNVRVLQQSY------------------PLLGAKDSFSRAGNRRAVELLVEINGKKI 157 + V + + P D+ + +R+ + + N + Sbjct: 218 YQPARVALTPGTVGTATDTVTVLEGPTLSLNPGRIEPDNGAFKNSRKPIVAEFQFNQNPL 277 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215 +++ H S + + +QA + +++ ++ ++AGD N I Sbjct: 278 FIIGNHFVSQRGGND---------AKREKQATAVGNFVKTLLSEDDKANVIVAGDLNDVI 328 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + ++ + S + N +DY ++ N + + Sbjct: 329 DSEPI-----AILEASGLTNLSELLPPSDRYTYEFRNNLQQLDYILVSDNLFTTGKSQFD 383 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + LSDH P+ + Sbjct: 384 IVH---VNVNQPSNLALSDHDPVLAQFT 408 >gi|149185250|ref|ZP_01863567.1| hypothetical protein ED21_19392 [Erythrobacter sp. SD-21] gi|148831361|gb|EDL49795.1| hypothetical protein ED21_19392 [Erythrobacter sp. SD-21] Length = 265 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 33/303 (10%), Positives = 82/303 (27%), Gaps = 66/303 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++ ++NIN + L ++ + + LQE+ + + + Sbjct: 4 SMKIATFNING----------------IKARLPRLLEWLEETRPTVACLQEIKT---MDE 44 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP + I + +A+ + + D Sbjct: 45 GFPAEEF-------EKIGYQAIWHGQKSFNGVAILSDG----TKPVEIQRGLDIDGPKEG 93 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +E I + +++L + + Y + + L+ + Q Sbjct: 94 EGEQARYLEAEVNGIRICNLYLPNGNPHPGPKFDYKLA------WMEKLRGRMAQIWAEE 147 Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 VP V+ GDFN + D + + + + Sbjct: 148 VPAVVLGDFNVIPEDKDVWSPKAMASDALMQPESRDAYRRFLANGWTDAIDTLNPRGGVW 207 Query: 247 ANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID+ ++ ++ D ++ SDH P+ Sbjct: 208 TYWDYQAGAWQRDHGFRIDHLLLSPETADRMVSAGV-------DKEYRGREKSSDHTPVW 260 Query: 300 IDY 302 ++ Sbjct: 261 VEL 263 >gi|326777965|ref|ZP_08237230.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus XylebKG-1] gi|326658298|gb|EGE43144.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus XylebKG-1] Length = 295 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 40/291 (13%), Positives = 85/291 (29%), Gaps = 55/291 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA- 81 +R+ ++NI+ + +GV D + L AD++ LQE+ + Sbjct: 43 PLRVATYNIHAGAGVDGVF-----------DLDRQTAELRALRADVIGLQEVDRHWGDRS 91 Query: 82 -------KVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYPLLGA 133 ++ + + ++ ++ ++ + A+ R + V L Sbjct: 92 EWRDLAGELARRLRMHVSFAPIYSLDPARPGDPRKEYGVAVLSRYRIVSAENHEITRLST 151 Query: 134 KDSFSRAGNRRAV-ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 +D E++V + G + V HL Y P ++ Q + Sbjct: 152 QDPNPAPAPAPGFGEVVVRVRGLPVHVYTTHL-----------DYRPDPAVRVAQVADTR 200 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + + + P ++ GDFN + W+ + D Sbjct: 201 RIMAEDRG---PKILLGDFNAEP-SAPELAPLWRELADADP----------GAPTFPAQD 246 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID+ + + SDH P+ D Sbjct: 247 PVKRIDFVAVSRGGPG---------TGITVRKAWVPESVASDHRPVVADLS 288 >gi|294643627|ref|ZP_06721429.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294808046|ref|ZP_06766819.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|292641004|gb|EFF59220.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294444687|gb|EFG13381.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] Length = 296 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 80/288 (27%), Gaps = 47/288 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL S+NI T ++ K L + D+ +QE + + + Sbjct: 42 IRLASYNIRTKGDKGD--------KSWEVRLNALVDVVRRNKFDMFAIQEGRTSQ-LKDM 92 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKD----SFS 138 N + + N H AI +K +VL+ + D + Sbjct: 93 MILNEYSYI-------GRDRDGDNKGEHCAIYYKKDRFKVLKHGDFWYSETPDIPSYGWG 145 Query: 139 RAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R + GKK +V + H S +L +Q + + Sbjct: 146 ARCRRICTWGYFKDLRTGKKFYVFNSHT-----DHEATEARRQSSFMLLEQVRKIAK--- 197 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI- 255 P GDFN + ++ + K + + Sbjct: 198 -----GRPTFCTGDFNATPDEEPIQLLLKDSLLLDSYKCTLTPPKGPSGSFYAYDKTGKT 252 Query: 256 --PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 ID+ + + DD K SDH P+ ++ Sbjct: 253 AKRIDFIFVTPKIKILS--------YHTIDDDIKYNKYSSDHFPVMVE 292 >gi|218530191|ref|YP_002421007.1| exodeoxyribonuclease III Xth [Methylobacterium chloromethanicum CM4] gi|218522494|gb|ACK83079.1| exodeoxyribonuclease III Xth [Methylobacterium chloromethanicum CM4] Length = 264 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 81/303 (26%), Gaps = 64/303 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N L + D+V LQE+ +A Sbjct: 1 MRITTWNVN----------------SIKQRVGHLLGFLDEAKPDVVCLQELKCQDA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + +A+ + LQ + L G R Sbjct: 41 ------SFPREEIEAAGYAVETLGQKAYNGVALLVRAP--LQYTQLLRGLPGDAEDEQAR 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 L+ + V I+L + + +Y + L+ + Sbjct: 93 YIEALVHGEGVAPVRVASIYLPNGNPAPGPKYSYKLAFMAR------LRAHARALMTTEE 146 Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 V+AGDFN F + + E + Sbjct: 147 ALVLAGDFNVIPEPEDAADPSVWTQDALFLPEPRRAFRALLAEGFTDGLRACEPSAGLYT 206 Query: 248 NK------NLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 RN+ ID+ ++ A L+ S ++ SDH P+++ Sbjct: 207 FWDYQAGCWPRNQGIRIDHLLLSPQAADRLVSASVQRH-------LRGLEKPSDHVPVTV 259 Query: 301 DYD 303 + Sbjct: 260 ELS 262 >gi|170759835|ref|YP_001786903.1| exodeoxyribonuclease III [Clostridium botulinum A3 str. Loch Maree] gi|169406824|gb|ACA55235.1| exodeoxyribonuclease III [Clostridium botulinum A3 str. Loch Maree] Length = 253 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 82/304 (26%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ SWN+N L + ++ DI+ +QE + Sbjct: 1 MRIYSWNVNGLRAVAKKNF---------------IEWIGEESPDILCIQETKLQENQLED 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + ++S + ++ +A K + + + DS R Sbjct: 46 NIKNIDGYYSYFS----------FAAKKGYSGVATYTKVKPISVKHSMGIEKFDSEGRI- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + K +L+I+ + + + L ++ + + Sbjct: 95 --------LITEFKNFTLLNIYFPNGQRDEER-------LQYKLDFYEALFNYCDELVKE 139 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKT-------IDPNDSLIRFPKEKDSRCNA------- 247 VI GD+N N + + I+ + + Sbjct: 140 GKKLVICGDYNTAHNEIDLKNPKANEKTSGFLRIERDWLDKIIERGYTDTFRNMNPDKIK 199 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY + N + +Y SDHCP+ Sbjct: 200 YSWWSYRFKARERNAGWRIDYHFVSNNLLDRVENTEILNEVY-----------GSDHCPV 248 Query: 299 SIDY 302 ++ Sbjct: 249 MLEL 252 >gi|332981666|ref|YP_004463107.1| Endonuclease/exonuclease/phosphatase [Mahella australiensis 50-1 BON] gi|332699344|gb|AEE96285.1| Endonuclease/exonuclease/phosphatase [Mahella australiensis 50-1 BON] Length = 287 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 38/290 (13%), Positives = 81/290 (27%), Gaps = 51/290 (17%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++ ++ + ++++NI+ + G + + Q + A I+ LQ Sbjct: 41 MMASASATQNGITVMTYNIHHGRDMSG-----------RDNLDSIVQEIRLSGAQIIALQ 89 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ F I + K I AV + +++ L G Sbjct: 90 EV-DRYMPRSGFKDQVKYIADQLSMYYAYGKTIDILSIEYGNAVISAFPILKRENIILPG 148 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + R ++ + + V HL +Q + Sbjct: 149 SSI-----EPRALLKTEIAVGNDIYNVWATHLGLLRED-------------RFKQIDAIN 190 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + Q P ++ GDFN + +D + + + D+ A + Sbjct: 191 AALAQ---ESKPTILLGDFNNICSSDEISDISDRL----KDVAALLGKGDAGTYAYGDNA 243 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + IDY + + + LSDH + Sbjct: 244 PNVRIDYIWVTDDILP--------------VEYHVNLLGLSDHASVVAKL 279 >gi|150007859|ref|YP_001302602.1| hypothetical protein BDI_1219 [Parabacteroides distasonis ATCC 8503] gi|255013440|ref|ZP_05285566.1| hypothetical protein B2_06000 [Bacteroides sp. 2_1_7] gi|298376780|ref|ZP_06986735.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_19] gi|149936283|gb|ABR42980.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] gi|298266658|gb|EFI08316.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_19] Length = 353 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 85/297 (28%), Gaps = 66/297 (22%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + V+++++N+N + + + + D DIV LQE +A+ Sbjct: 98 EAVKVITYNVNNFNTDG------------KKQLPNIADWLRKEDPDIVCLQECPVESALR 145 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 T + + + A+ K + +S + + Sbjct: 146 -------MDSVAKTLSFLPYYCSTRSATKAAGNAIFSKYPILRFESILYPESSNKS---- 194 Query: 142 NRRAVELLVEINGKKIWVLDIHLK-----------SFCFLDSLENTYSPSCSLLSQQAQ- 189 + +++I G + V + H + + + + + ++ Q + Sbjct: 195 ----LFAVMDIQGDSVRVFNNHFQTTSVNAVKPRLYQAHAEGKQLEETEAAFHMAFQMKK 250 Query: 190 ------WLKDWITQKKESLV-PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 D+I Q ++ P +I GDFN D F Sbjct: 251 NFVKRATQADYIRQMLDAGEGPVIICGDFNDTPASYTYRTV------KGDLTDGFRDCGS 304 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + L+ IDY + + + S SDH P+ Sbjct: 305 GFGYTFRQLKRIFRIDYIIYSPD--------------FKGVTYDSPNLDYSDHKPVV 347 >gi|39940404|ref|XP_359739.1| hypothetical protein MGG_05038 [Magnaporthe oryzae 70-15] gi|145010717|gb|EDJ95373.1| hypothetical protein MGG_05038 [Magnaporthe oryzae 70-15] Length = 307 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 38/310 (12%), Positives = 72/310 (23%), Gaps = 32/310 (10%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQ---------EGVSLWKNSVKRTTSDYTLLR 58 L + A + +R+V+WNI + + S R Y L Sbjct: 6 LLFGLVAAEAAMASLPLRVVTWNIRYAASSLEQGEKPWFDIFCWATKSRCRQYKFYDKLN 65 Query: 59 QYAKNL---DADIVFLQEMGSYNAVAKVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAI 114 Q + ++ +QE+ + W + S T+ Sbjct: 66 QIVSSTPNGAPMVIGMQEVLDNQLNDIQNSLGDGWAHIGVGRDDGKKAGEYSPIFYQTSQ 125 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + P + R + E + + Sbjct: 126 LRVLASETKWLSPTPD-SVSFGWGAGSRRIVTTAVFEHIATGEKFIHANTHLDNVSAQAR 184 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + Q A+ +P + GDFN + Sbjct: 185 SEGIKVVLTRIQAAR--------VAFGPLPVSLTGDFNSAPYADAFKTLADTGFMKGELY 236 Query: 235 IRFPKEKDSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + + ID+ + +S + Y D G Sbjct: 237 DLATPAQHAGPYTTTYTTFREGAGESRIDFIWLGAA-----QNYPYSVVKYEIWDHTVDG 291 Query: 290 KRLSDHCPIS 299 R+SDH P+ Sbjct: 292 MRVSDHRPVV 301 >gi|89068210|ref|ZP_01155620.1| exodeoxyribonuclease III [Oceanicola granulosus HTCC2516] gi|89046127|gb|EAR52185.1| exodeoxyribonuclease III [Oceanicola granulosus HTCC2516] Length = 264 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 84/305 (27%), Gaps = 71/305 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAV 80 +++ ++NIN + + L + D D+V LQE+ N Sbjct: 4 SMKIATFNING----------------IKARHQSLLAWLDEADPDVVLLQEIKSIDENFP 47 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +++F + + + +A+ K D +R Sbjct: 48 SELFEEKGYNVATH------------GQKGFNGVAILSKLPLEDVSRGLPGDDTDEHARW 95 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +E V I + ++L + + Y + + L + E Sbjct: 96 -----IEATVVGEHAAIRLCGLYLPNGNPAPGPKYDYKLA------WMERLHARAAELME 144 Query: 201 SLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRC 245 + P ++AGD+N W+ + F + + Sbjct: 145 AEEPAIMAGDYNVIPQPEDAARPKAWVKDALFLPQTRRAWRRLLNLGFTEAFRAKTLAAG 204 Query: 246 NANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + ID+ +M A + D + SDH P Sbjct: 205 HYSFWDYQAGAWQKNDGIRIDHVLMTPQAADLMRDVWI-------DSAVRGRDKPSDHVP 257 Query: 298 ISIDY 302 + +D Sbjct: 258 VVVDL 262 >gi|328354255|emb|CCA40652.1| CCR4-NOT transcription complex subunit 6 [Pichia pastoris CBS 7435] Length = 743 Score = 92.7 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 43/324 (13%), Positives = 92/324 (28%), Gaps = 43/324 (13%) Query: 22 QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--- 76 ++++N + ++ + L++ +L DI+ LQE+ Sbjct: 398 NTFTMMTYNTLCQHYATKKMYRYTPSWALDWDYRRERLKEQILDLQTDIICLQEVEHKTF 457 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + + + + K S A R + +++ + G Sbjct: 458 DDFWQPIMLSHGYKGIFHVKSRAKTMKESSAYKVDGCATFYRTSKFQAVERKHFEYGRIA 517 Query: 136 SFSRAGNRR---------------AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + + L +G K+ V + HL + Sbjct: 518 MSQDKFKKTEDLFNRFLNKDNIASVLILEHIPSGNKLVVANTHLHWDPEFND--VKTMQV 575 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 LL + ++ ++ K + VP +I GDFN K++ T+D ++ +I Sbjct: 576 GVLLDELQAVIRKHLSPKDITKVPLLICGDFNSKVHSAVYQLFSQGTVDKHEDIIGRDYG 635 Query: 241 KDSRC-------------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILY 280 K + N + IDY + + Sbjct: 636 KFTEEGFRHPFHLQSSYDSIGELPYTNVSPTFTDVIDYIWYSTPSLSVKGVLGQVDPDYS 695 Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304 SDH P+ + F Sbjct: 696 KNIIGFPNADFPSDHIPLLSTFMF 719 >gi|126727467|ref|ZP_01743301.1| Endonuclease/exonuclease/phosphatase [Rhodobacterales bacterium HTCC2150] gi|126703247|gb|EBA02346.1| Endonuclease/exonuclease/phosphatase [Rhodobacterales bacterium HTCC2150] Length = 334 Score = 92.7 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 36/333 (10%), Positives = 86/333 (25%), Gaps = 53/333 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDY--------TLLRQYAKNLDADIVFLQEMG 75 +R+ ++N+ + + + Y L + +DAD + + E Sbjct: 1 MRIATYNVEWFNALFDDDGQMINDASWSKRYNVTKAQQTAALGAVFQAMDADAIMVIEAP 60 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS-------- 127 + + R + SN+ I + +V + Sbjct: 61 DSHRGRDGVYALEGFAAHFGLRARSGVIGYSNDTQQEIILMYDPDVLQASHAPQASDAAP 120 Query: 128 -------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY--S 178 L ++ +E+ ++ +H KS + Sbjct: 121 SFEEEFKLDLDLDSHPDPIVFSKPPLEVSAVKGDFAFNLIGVHAKSKAPHGASNPKEVMQ 180 Query: 179 PSCSLLSQQAQW---LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--------- 226 S +Q L+ + + + P ++ GDFN F + Sbjct: 181 ISIQNRRKQLAQCIWLRARVAEHLAAKTPLIVLGDFNDGPGLDEYERLFGRSGVEIVLGE 240 Query: 227 -----TIDPNDSLIRFPKEKDSRCNANKNL------RNKIPIDYFVMDQNAYKFLIQESF 275 + + + + ++ +DY ++ + + Sbjct: 241 GADDEKLYDPHAQRALSQRLPANFTTSRFFLRHEKRYLSALLDYIMVSSDLKEKNPAWHI 300 Query: 276 SEILYNEDDIKSRGKR-----LSDHCPISIDYD 303 + R SDH P+++D D Sbjct: 301 WHPFDDPACYGDLNLREALLAASDHFPVTLDID 333 >gi|254476088|ref|ZP_05089474.1| endonuclease/exonuclease/phosphatase [Ruegeria sp. R11] gi|214030331|gb|EEB71166.1| endonuclease/exonuclease/phosphatase [Ruegeria sp. R11] Length = 331 Score = 92.7 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 55/329 (16%), Positives = 100/329 (30%), Gaps = 49/329 (14%) Query: 24 VRLVSWNINTLSE----QEGVSLWKNSVKRTTSDYT----LLRQYAKNLDADIVFLQEMG 75 +RLV++N+ S + + L R D L + LDAD + + E Sbjct: 1 MRLVTYNVEWFSALFDRADRLVLDGKLSGRHGIDRATQARALAKVFTALDADGIMVIEAP 60 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ--------- 126 N+ + + R SN+ + +V Sbjct: 61 DTNSRQQSVRALEHFAAEAGLRAREAISGFSNDTQQEITFLYDPDVMDAVHTPGQNDAAP 120 Query: 127 ------SYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENT--- 176 L A ++ +EL V+ G + ++ HLKS + Sbjct: 121 RFDGVFHIDLDIDAQKDEVAFSKPPLELTVKTKGGTSLALIGAHLKSKAPHGARTPAAVT 180 Query: 177 --YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-------- 226 + QA WL+ I Q+ ++ GD N F + Sbjct: 181 TLSIANRRKQLAQAIWLRRRIDQRLAEGQDVIVLGDLNDGPGLDQYEKLFNRSSVEIVMN 240 Query: 227 --TIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAY----KFLIQESF 275 DP+ + P+ + A +DY ++ ++ I F Sbjct: 241 SDLHDPHAQSLLAPRLRVLPSTARFYNKETRRYFSALLDYIMLSPGLMRHQPRWRIWHPF 300 Query: 276 SE-ILYNEDDIKSRGKRLSDHCPISIDYD 303 + Y + ++ + SDH P+S+D D Sbjct: 301 EDAACYEDAPLREALLQASDHFPVSLDID 329 >gi|290962564|ref|YP_003493746.1| endonuclease/exonuclease/phosphatase family protein [Streptomyces scabiei 87.22] gi|260652090|emb|CBG75222.1| putative endonuclease/exonuclease/phosphatase family protein [Streptomyces scabiei 87.22] Length = 295 Score = 92.7 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 83/304 (27%), Gaps = 35/304 (11%) Query: 6 VLALVFFLVPCTA-SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 +L +P A A + ++++N+ + + R T ++R+ + Sbjct: 19 LLTTAGSSLPAAAGEYAGALNVMTFNVRF-------ATVVDKTPRWTVRRPVMRELLRRE 71 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 ++ QE + T R T + Sbjct: 72 RPHVIGTQEGLYQQLRMIEKDLGGHYDWIGTGRGGGSKDEFMAIFYDTRRLDPIEFDHYW 131 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLV---EINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 P A +++ R + G++ +VL+ HL S S Sbjct: 132 LSDTPYTIASNTWGADWLRMVTWVKFADLADGGREFYVLNTHL------------DSVSQ 179 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW-KTIDPNDSLIRFPKE 240 + A+ + + I + P V+ GDFN + + + Sbjct: 180 YARERSAKLVGETIAGW-DRSAPVVVTGDFNAAAHDNRVYELMLGNGLVDAWDAAASRSP 238 Query: 241 KDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + L+ ID+ + + + G SDH P+ Sbjct: 239 AYGTYHGYRALKPDGRRIDWILTSP---------GVTTHWAAMNTFSVDGLYPSDHLPVQ 289 Query: 300 IDYD 303 + Sbjct: 290 VSLT 293 >gi|187779869|ref|ZP_02996342.1| hypothetical protein CLOSPO_03465 [Clostridium sporogenes ATCC 15579] gi|187773494|gb|EDU37296.1| hypothetical protein CLOSPO_03465 [Clostridium sporogenes ATCC 15579] Length = 253 Score = 92.7 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 85/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ SWN+N L + ++ + DI+ +QE + Sbjct: 1 MRIYSWNVNGLRAVAKKNF---------------LEWIGEENPDILCIQETKLQENQLED 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + ++S ++ ++ +A K + + + DS R Sbjct: 46 NIKNIDGYYSYFS----------FAHKKGYSGVATYTKEEPISVKHGIGIERFDSEGRI- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + K +L+I+ + + + L ++ + E Sbjct: 95 --------LITEFKDFILLNIYFPNGQRDEER-------LQYKLDFYEALFNYCDELVEE 139 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKT-------IDPNDSLIRFPKEKDSRCNA------- 247 VI GD+N N + + I+ + + Sbjct: 140 GKKLVICGDYNTAHNEIDLKNPKANEKASGFLRIERDWLDKIIERGYIDTFRNMNPDKIK 199 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY + N + +Y SDHCP+ Sbjct: 200 YSWWSYRFKARERNAGWRIDYHFVSNNLLDRVENTEILNEVY-----------GSDHCPV 248 Query: 299 SIDYD 303 ++ + Sbjct: 249 MLELE 253 >gi|307946864|ref|ZP_07662199.1| exodeoxyribonuclease III [Roseibium sp. TrichSKD4] gi|307770528|gb|EFO29754.1| exodeoxyribonuclease III [Roseibium sp. TrichSKD4] Length = 260 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 36/302 (11%), Positives = 87/302 (28%), Gaps = 67/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + + + + + +I LQE+ S + Sbjct: 1 MKIATWNING----------------VKARLDTVLAWLQEAEPEIACLQEIKSVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + +A+ Q D +R Sbjct: 41 ------NFPREAIEELGYNVKTHGQKSFNGVALLSNRPLEDVQRGLPGDDSDEQARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E V + + V ++L + L + + Y L ++ + + Sbjct: 92 --IEGTVSTDNGVVRVGCLYLPNGNPLGTEKFPYK------LGWMDRLIAHAKRRLDDEI 143 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P+++ GD+N + + + ++T+ D+ Sbjct: 144 PYLLLGDYNVIPDPMDAKNPENWGNDALFQPESRQKFRTLTHLGFTEAVRACTDAPETFT 203 Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 N I ID+ ++ A + D ++ SDH P+ + Sbjct: 204 FWDYQAGAWQKNNGIRIDHILLSPQASDLMAGCGI-------DKHVRGWEKPSDHVPVWV 256 Query: 301 DY 302 + Sbjct: 257 NL 258 >gi|307729190|ref|YP_003906414.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1003] gi|307583725|gb|ADN57123.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1003] Length = 258 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 26/303 (8%), Positives = 81/303 (26%), Gaps = 68/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + + + D++ LQE Sbjct: 1 MKIATWNVNSL----------------KVRQQHVIDWLETSRTDVLCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + + + + ++ + F R Sbjct: 35 LKLPDEKFPRAELEEKGYRSWFAGQKTYNGVGILVREGISVDETTIVRNIP-GFDDLQQR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++ + + + + Y + L DW+ + Sbjct: 94 VVAATV-----DGVRIISAYFPNGQAPGTDKFAYK------LRWLAALHDWVQSEMALYP 142 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANK 249 + GD+N + +D + + + L+ ++ + Sbjct: 143 KLALLGDYNIAPDDRDVHDPKAWEGQNLVSPEERAEFVRLTELGLVDAFRQFEQPEKIYS 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ + + D + + + SDH P+ Sbjct: 203 WWDYRMMAFRRNAGLRIDHILLSKPLAETCTSCEV-------DKVPRKWDQPSDHAPVVA 255 Query: 301 DYD 303 Sbjct: 256 QLS 258 >gi|269960966|ref|ZP_06175335.1| exodeoxyribonuclease III [Vibrio harveyi 1DA3] gi|269834185|gb|EEZ88275.1| exodeoxyribonuclease III [Vibrio harveyi 1DA3] Length = 268 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 82/309 (26%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K + Q + + + Sbjct: 42 -------FPIEDVEAMGYKVYFHGQKAHYGVAMLCKQEPISVQK-----GFPTDNEEHQK 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + E ++ + + + F + Q + L ++ + Sbjct: 90 RMIMATFEDENEE----KVTVLNGYFPQGDNIAHETKYPYKRQFYKDLMTYLNNHHSNDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ ++ +T+ F Sbjct: 146 QLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSFQPEEREWLQTLLDWGFEDTFRNLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + K I+ + D ++ S Sbjct: 206 EVDDRFSWFDYRSRGFDDNRGLRIDVILATPSLAKKCIES-------DIDYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|319788284|ref|YP_004147759.1| endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis 11-1] gi|317466796|gb|ADV28528.1| Endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis 11-1] Length = 261 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 86/284 (30%), Gaps = 49/284 (17%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK--- 82 +++ NI+ + LR+ + + ADIVFLQE+ +A + Sbjct: 17 VLTANIHMGFDMLQRRFV----------LPRLREAIRRVGADIVFLQEVQGRHADRERSV 66 Query: 83 -VFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 +P+ + + + + H A+ + V ++ + A Sbjct: 67 HQWPETPQYEYLADTLWPQFAYGRNAVYPHGHHGNALLSRLPIVRHDNHDVSVAGH---- 122 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 NR + +E+ G + I + + Q L + ++ Sbjct: 123 -ENRGLLHCELELPGHPQHLHAICVHLGLRD-----------AHRRSQVGLLGALLREQV 170 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 + P V+AGDFN + + + F +++ + L +P+D Sbjct: 171 PADAPVVVAGDFNDW------RGAAHRQLLDCGLVEAFEQQRGRLARSFPALLPLLPLDR 224 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + RLSDH P+ Sbjct: 225 IYVRG----------LQVHEVATPRG-RPWTRLSDHLPLHARLS 257 >gi|260641834|ref|ZP_05413661.2| Ser/Thr protein phosphatase family protein [Bacteroides finegoldii DSM 17565] gi|260624593|gb|EEX47464.1| Ser/Thr protein phosphatase family protein [Bacteroides finegoldii DSM 17565] Length = 611 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 83/305 (27%), Gaps = 64/305 (20%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M + ++L V + + +RL+++NI + + + + + Sbjct: 4 MKKIFLLISVILFIFPVQAQ-HTLRLMTYNIKNANGMDDICS-----------FQRVANV 51 Query: 61 AKNLDADIVFLQEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 N D+V +QE+ S + V + I + Sbjct: 52 INNASPDVVAIQEVDSMTRRSGQKYVLGEIAERTQMHACFAPAIE----FEGGKYGIGLL 107 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 K V + Q+ PL G R R + E ++ S D Sbjct: 108 TKQVPLRLQTIPLPG------REEARTLILAEFED-----YIYCCTHMSLTEKD------ 150 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + + L+ + P +AGD N + + F Sbjct: 151 ---------RMKSLEVVKSFVAPYKKPLFLAGDMNAEPESDFIK----------ELQKNF 191 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + + K IDY ++ S + SDH P Sbjct: 192 QMLSNPKQSTYPASDPKETIDYITALKSNANGFALISSQVL---------DEPMASDHRP 242 Query: 298 ISIDY 302 I ++ Sbjct: 243 ILVEL 247 >gi|115351807|ref|YP_773646.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD] gi|115281795|gb|ABI87312.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD] Length = 286 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 37/308 (12%), Positives = 83/308 (26%), Gaps = 52/308 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 +RL+ WN+ + +GV D A+ L D D++ +QE+ Sbjct: 1 MRLIDWNVQWGRDADGV-----------VDLARTIAAARRLGDFDVLCMQEVTRGFGALP 49 Query: 75 --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + ++ + A+ + L Sbjct: 50 GQPGPDQFTELAALLPGYTIFEAIGADLPPLEPDAARRQFGNAIATRLPVGRVLRQLLPW 109 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 D+ + R A+E+ + + ++ HL+ + + ++A Sbjct: 110 PADASGPSMPRVALEVELTTPSGALRIITTHLEFYSARQ--RLAQVDAMRARHREACAHA 167 Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 D + + PF +I GDFN + D + + Sbjct: 168 DQPAPAENATGPFTATGQARDAIICGDFNSAFDSDAYRRLLEPIADAPSFVDAWVARHAG 227 Query: 244 RC--------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + + D+ + + + R SDH Sbjct: 228 HTPPPTAGVYDTAQWSDGPLACDFVFVTDTLLPRVTRCEI-----------DGDVRASDH 276 Query: 296 CPISIDYD 303 P+ ++ + Sbjct: 277 QPVVLEVE 284 >gi|308209125|gb|ADO20907.1| deoxyribonuclease-1 [Saccharopolyspora spinosa] Length = 272 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 76/312 (24%), Gaps = 70/312 (22%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGS 76 ++ + + + N+N L ++ AD++ +QE Sbjct: 5 TLGGVLTVSTVNVNGLRAAAKKGF---------------VEWLAATRADVICMQETRAEP 49 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 ++V W + S+ +A+ + + D Sbjct: 50 DQLTSEVREPAGWHTVLAP----------SSAKGRAGVAIYSRAEPAAVRIGFGSAEFDE 99 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R +++ G + V ++L S ++ L++ Sbjct: 100 SGR-------YAEIDLPG--VVVASLYLPSGDVGTPRQDEKERFMKEFRAYLGDLRERA- 149 Query: 197 QKKESLVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241 ++ GD+N +L + + + + Sbjct: 150 --AAEGREVLVCGDWNIAHQQIDLKNWKSNQKEAGFLPEERAWLTEVFDSGYADVLRRLH 207 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + IDY V S +R Sbjct: 208 PEGPGPYSWWSYRGKAFDNDSGWRIDYIVSSPGLASRCTDAYVE-------KAASYDQRW 260 Query: 293 SDHCPISIDYDF 304 SDH P++ +DF Sbjct: 261 SDHAPVTAAFDF 272 >gi|229824863|ref|ZP_04450932.1| hypothetical protein GCWU000182_00212 [Abiotrophia defectiva ATCC 49176] gi|229790866|gb|EEP26980.1| hypothetical protein GCWU000182_00212 [Abiotrophia defectiva ATCC 49176] Length = 258 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 94/282 (33%), Gaps = 32/282 (11%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++LV++NI EQ+G++ + L+ + DI+ QE+ + AV Sbjct: 2 GDIKLVTFNIRCDYEQDGINNFAFRKP-------LIVDKVNSTQPDIICFQEVLPHVAVW 54 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + I + + D AIA +K ++ S + G Sbjct: 55 LKATFTDYYIV-------GCGRSEDFADEQEAIAFKKDRFNLVNMSTFWMSETP--YIPG 105 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R + ++ + DI K+ L + + S + L Q LK + Sbjct: 106 SRYKKQSTCPRVTTEVVLYDIAEKNMFRLLNTHLDHEGSEARLLGLNQLLKKIDEEIIFP 165 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 +P +IAGDFN + + I + + K IDY Sbjct: 166 DIPVIIAGDFNAEPDSPE----MQAVITSEKYYDLT---AGIDFTFHDYGKTKEKIDYIF 218 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +N ++ G +SDH PI +D Sbjct: 219 VSRNITCKKTEKWDDVKN---------GVYISDHYPIQVDIS 251 >gi|284053675|ref|ZP_06383885.1| exodeoxyribonuclease III [Arthrospira platensis str. Paraca] gi|291570470|dbj|BAI92742.1| exodeoxyribonuclease III [Arthrospira platensis NIES-39] Length = 263 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 93/304 (30%), Gaps = 68/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ +WN+N RT D + + + D D++ LQE + + Sbjct: 1 MKIATWNVN--------------SIRTRQD--QVLGWLQGQDIDVLCLQETKVIDQDFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 F + + ++ ++ N AI R ++ P+L A Sbjct: 45 SPFEELGYHVYIYGQKAYN----------GVAIFSRLNIESIIMGFTPILSADKVGDLDD 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R + +++ I ++++++ + + S + Y Q L+D++ Q Sbjct: 95 QKRVIAGVID----DICIINVYIPNGSSVGSDKYEYK------LQWLNRLRDYLQQMLIK 144 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247 I GDFN + + N L ++ Sbjct: 145 YPHLCICGDFNIAPEDRDIYNPQNRENHIMASAAERQALDAIANLGLADGFRKFTQDGGH 204 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ + Y+ I D + SDH P+ Sbjct: 205 FTWWDYRAASFTRNRGWRIDHHYLSPGLYENAIACYI-------DTEPRTQPKPSDHAPV 257 Query: 299 SIDY 302 ++ Sbjct: 258 ILEI 261 >gi|229031365|ref|ZP_04187367.1| Exodeoxyribonuclease [Bacillus cereus AH1271] gi|228729930|gb|EEL80908.1| Exodeoxyribonuclease [Bacillus cereus AH1271] Length = 252 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 86/305 (28%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + +Y + +ADI LQE+ + + Sbjct: 1 MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQDGQIDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ + + + ++ A+ K + + D R Sbjct: 47 NPEGYYTYW-----------NYAVKKGYSGTAIFSKQEPLSVTYGLGIEEHDQEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + + L + Sbjct: 92 -----VITVEFEGFYMITLYTPNSKRGLERLDYRMKWEDDFRAYIKRL--------DEKK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + I + + + A Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTRILEEGFIDTYRYLYPDQEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV+ + + + + + SDHCP+ Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDKITEAKINSEV-----------MGSDHCPVE 247 Query: 300 IDYDF 304 + +F Sbjct: 248 LHINF 252 >gi|304383804|ref|ZP_07366262.1| endonuclease/exonuclease/phosphatase family protein [Prevotella marshii DSM 16973] gi|304335060|gb|EFM01332.1| endonuclease/exonuclease/phosphatase family protein [Prevotella marshii DSM 16973] Length = 325 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 35/316 (11%), Positives = 85/316 (26%), Gaps = 47/316 (14%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSV-----------KRTTSDYTLLRQYAKNLD------- 65 +V N L + + + + R + + + + Sbjct: 18 FTVVQLNCENLFDTQHDTGKNDIEFTETGIRHWTFNRYWAKLNGIARTIVSCGKGIDGGA 77 Query: 66 --ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 D+V L E+ + + + K+ N+ S + +A+ Sbjct: 78 ALPDVVALCEVENDTVMTDLTKKSLLRAAGY-----NYVMTHSADRRGMDVALLYSPATF 132 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 R + + + G + ++ +H S + Y + Sbjct: 133 APIRDCTFRVPPPEGMRPTRDILYVAGRLPAGDTLHIIVVHAPSRMGGEPQTRPYRCKVA 192 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 + D I ++ +IAGDFN + K + + Sbjct: 193 QC---IVAVTDSIRRQSPE-AKILIAGDFNDYSDNEAVRSIVAKGMADVSEHATGKQGAG 248 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR----------- 291 + +D+ + F+ + ++ + +D + G R Sbjct: 249 G---TYRYQGQWGSLDHLFASPSLLPFIQECYINDAPFLTEDDPTYGGRMPHRSFRGTRY 305 Query: 292 ---LSDHCPISIDYDF 304 +SDH P+ + + Sbjct: 306 VGGISDHLPLVVHLRW 321 >gi|301164025|emb|CBW23581.1| putative conserved exported protein [Bacteroides fragilis 638R] Length = 344 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 41/326 (12%), Positives = 86/326 (26%), Gaps = 56/326 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67 R+V WN + SL + + +R + + + Sbjct: 24 PFRVVFWNTENFFDTRHDSLKNDMEFLPHSMRHWNHRRYKKKLDNVARTLTAIGEWNFPA 83 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 ++ L E+ + + + + + I A+ ++ ++L Sbjct: 84 LIGLCEVENDTVMRDL---TLYSPLKEAGYRYVMTHCSDLRGIDVALLYQRDRFKLLS-- 138 Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y L + R + + + + G + ++ HL S S Sbjct: 139 YSALSVGNFKGHRPTRDILHVSGLLLTGDTLDIMVAHLPSRSGGV------RQSEPYRLY 192 Query: 187 QAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKT------IDPNDSLIRFP 238 AQ LKD +I GDFN + Sbjct: 193 AAQKLKDAADSLINVRPSAKLIIMGDFNDYPTDKSVVQVLQALSPEVSTHHDRLYHLLAR 252 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYK-----FLIQESFSEI--------------- 278 K KD + K +D+ ++ F ++ + Sbjct: 253 KAKDRNFGSYKYQGEWGLLDHLIVSGTLLDISGTLFTKEKKANVARLPFLLTKDEKYGGM 312 Query: 279 -LYNEDDIKSRGKRLSDHCPISIDYD 303 + + SDH P+ +D++ Sbjct: 313 QPFRTYVGMKYQEGYSDHLPVYVDFE 338 >gi|163793638|ref|ZP_02187613.1| Endonuclease/exonuclease/phosphatase [alpha proteobacterium BAL199] gi|159181440|gb|EDP65955.1| Endonuclease/exonuclease/phosphatase [alpha proteobacterium BAL199] Length = 258 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 38/282 (13%), Positives = 69/282 (24%), Gaps = 57/282 (20%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 VR+++WNI+ Q+G D +R+ +L DI +QE+ Sbjct: 2 NSVRVLTWNIHGFLGQDGGF-----------DPERVRRIIADLSPDIAAIQEVVGPECGV 50 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + N +R + + S R Sbjct: 51 DGAAVLRASMPGADAIEANVERRIEGI---YGQMLLSRFPVR-----HWTKVDISVERRE 102 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 RRA++ +++ G + V+ HL Q L + + Sbjct: 103 PRRAIDAVLDAPGGPMRVICTHLGLTGS-------------ERRLQVGALCRLLD--ADP 147 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 + ++ GD N D + R +D Sbjct: 148 RIDTLVLGDIN---------DWRIGGVSERCLAPVLGAGTRHRTYPAAFPVFP--LDRIW 196 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + SDH P+ D Sbjct: 197 FRP------------VERVIRTRVVREAGLASDHLPVVADIS 226 >gi|317473851|ref|ZP_07933131.1| endonuclease/Exonuclease/phosphatase [Bacteroides eggerthii 1_2_48FAA] gi|316909928|gb|EFV31602.1| endonuclease/Exonuclease/phosphatase [Bacteroides eggerthii 1_2_48FAA] Length = 372 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 37/349 (10%), Positives = 87/349 (24%), Gaps = 62/349 (17%) Query: 8 ALVFFLVPCTASV-------AQKVRLVSWNINTLSEQEGVSLWKNSVK-----------R 49 ALVF +A + R++ +N+ L + +L + + Sbjct: 28 ALVFLAFLSSAPLYGQIKKDTLTFRIMGYNVENLFDCRHDTLKNDYEFLPDAVRHWNYFK 87 Query: 50 TTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105 + + + +V L E+ + + + + + I + Sbjct: 88 YKKKLDAIARVIIAVGKWTPPALVALCEVENDSVLHDL---TRYSILREAGYRYVITHSP 144 Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHL 164 I A+ ++ ++L L S R + + + +N + V H Sbjct: 145 DERGIDVALLYQRGMFKLLSNQ-SLPVTGLHKSSRPTRDILHVSGLLLNRDTLDVFVAHF 203 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 S Y + + A + + +I GDFN Sbjct: 204 PSRSGGAKASEPYRLLAAQRLKNATDSLFHVRTHPQ----IIIMGDFNDYPGNKSVQKIL 259 Query: 225 WKT--------IDPNDSLIRFPKEKDSR--CNANKNLRNKIPIDYFVMDQNAYKFLIQ-- 272 + ++ + + K +D+ ++ N Sbjct: 260 KAGMPPAETDSLKSQMLYHLLARKSAANKHFGSYKYQGEWGLLDHIILSGNLLTATSPLY 319 Query: 273 -------------------ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + SDH P+ ++ Sbjct: 320 TAEDKADVFHAPFLLTEDKKYGDNQPFRTYYGMKYQAGYSDHLPVWAEF 368 >gi|303328283|ref|ZP_07358721.1| exodeoxyribonuclease III [Desulfovibrio sp. 3_1_syn3] gi|302861613|gb|EFL84549.1| exodeoxyribonuclease III [Desulfovibrio sp. 3_1_syn3] Length = 268 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 87/308 (28%), Gaps = 71/308 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N L W ++ DA IV LQE K Sbjct: 3 IKLVSWNVNGLRALSAKPEW---------------EWFARTDAQIVALQE-------TKA 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ S E H ++ +AV + + ++ D + R Sbjct: 41 HPEQLKEELASPEGWEAHWSSSHVKKGYSGVAVFSRMTPLAVRA----ELPDPQWQGEGR 96 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL----SQQAQWLKDWITQKK 199 + + + + + + EN + ++ + + Sbjct: 97 L-----LHLEFPDFHFFNGYFPNGGAEELDENGKPTGRFKRVPYKMGFFEAFLNYAEECR 151 Query: 200 ESLVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 +S P V+ GDFN +L F + F K + Sbjct: 152 KSK-PIVVCGDFNIAHQAIDLARPKQNVKNTGFLPEERAFLDRFTAMGYVDTFRKVHGDQ 210 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + K IDYF + + + +Y SDH Sbjct: 211 PDQYSWWSYKTRAREKNIGWRIDYFFVSEELAPAVSDAWIENNVY-----------GSDH 259 Query: 296 CPISIDYD 303 CP+ ++ + Sbjct: 260 CPVGLELE 267 >gi|183980766|ref|YP_001849057.1| exodeoxyribonuclease III protein XthA [Mycobacterium marinum M] gi|183174092|gb|ACC39202.1| exodeoxyribonuclease III protein XthA [Mycobacterium marinum M] Length = 276 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 36/307 (11%), Positives = 71/307 (23%), Gaps = 66/307 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +RL +WN+N + + + + D D++ +QE + Sbjct: 4 GTLRLATWNVN----------------SIRTRLPRVLDWLERADVDVLAIQETKCSDT-- 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + +A+ + Q S Sbjct: 46 --------QFPALPLFELGYEVAHVGFNQWNGVAIASRVGIDDVQIGFDGQPAWSGKPEV 97 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK-- 199 A V + V +++ + L+ TY L+D Sbjct: 98 AAAAEARAVGATCGGVRVWSLYVPNGRALEDPHYTYKLD------WLAALRDTAQCWLKN 151 Query: 200 ESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + P +AGDFN + I Sbjct: 152 DPGAPIALAGDFNIAPTDEDVWSTEFFTGATHVSEPERKAFNAIVDAQFTDLVRPFTPGP 211 Query: 245 CNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 ID+ + ++ + +GK SDH Sbjct: 212 -GVYTYWDYTQLRFPKKQGMRIDFILGSPALAGRVVDAQIV-------RDERKGKAPSDH 263 Query: 296 CPISIDY 302 P+ +D Sbjct: 264 APVFVDL 270 >gi|53714527|ref|YP_100519.1| hypothetical protein BF3240 [Bacteroides fragilis YCH46] gi|52217392|dbj|BAD49985.1| conserved hypothetical protein [Bacteroides fragilis YCH46] Length = 344 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 42/326 (12%), Positives = 84/326 (25%), Gaps = 56/326 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67 R+V WN L + SL + + +R + + + Sbjct: 24 PFRVVFWNTENLFDTRHDSLKNDMEFLPHSMRHWNHRRYKKKLDNVARTLTAIGEWNFPA 83 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 ++ L E+ + + + + + I A+ ++ ++L Sbjct: 84 LIGLCEVENDTVMRDL---TLYSPLKEAGYRYVMTHCSDLRGIDVALLYQRDRFKLLS-- 138 Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y L + R + + + + G + ++ HL S S Sbjct: 139 YSALSVGNFKGHRPTRDILHVSGLLLTGDTLDIMVAHLPSRSGGV------RQSEPYRLY 192 Query: 187 QAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKT------IDPNDSLIRFP 238 AQ LKD +I GDFN + Sbjct: 193 AAQKLKDAADSLINVRPSAKLIIMGDFNDYPTDKSVVQVLQALSPEVSTHHDRLYHLLAR 252 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI-------------------- 278 K KD + K +D+ ++ E Sbjct: 253 KAKDRNFGSYKYQGEWGLLDHLIVSGTLLDISGTLFTEEKKANVARLPFLLTKDEKYGGM 312 Query: 279 -LYNEDDIKSRGKRLSDHCPISIDYD 303 + + SDH P+ +D++ Sbjct: 313 QPFRTYVGMKYQEGYSDHLPVYVDFE 338 >gi|298491351|ref|YP_003721528.1| endonuclease/exonuclease/phosphatase ['Nostoc azollae' 0708] gi|298233269|gb|ADI64405.1| Endonuclease/exonuclease/phosphatase ['Nostoc azollae' 0708] Length = 256 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 30/286 (10%), Positives = 69/286 (24%), Gaps = 42/286 (14%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+ ++S+N+ GV + + ++ D++ QE + Sbjct: 2 KITVMSFNLRYDKPDSGVR-------QWEKRIGAIASVIQHYQPDLIGTQEGKTPQLSNL 54 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAKDS 136 + + + H A+ + + + Q P + + Sbjct: 55 QALLPEYKFI-------GGDRTGTGEGEHCAVFYNPQRLELQQTKDFYLSDTPEIPGSIT 107 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + R A + I + ++ + A + + Sbjct: 108 WDTRLPRMATWANFTVGNPSISLTIVNTHL----------DHENAKARELGAALVILRLM 157 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + ++ GDFN L + ++ Sbjct: 158 EFPSEDY-LLLTGDFNANPTTLARMILADNYKIQDALATLPLDKQK--TFHEFTGEAWDA 214 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID D+ F D + SDH P+ + Sbjct: 215 IDTIYCDRR---------FQIEQVIIDRQQWEDIWPSDHFPVIVKL 251 >gi|153937900|ref|YP_001390827.1| exodeoxyribonuclease III [Clostridium botulinum F str. Langeland] gi|168180137|ref|ZP_02614801.1| exodeoxyribonuclease III [Clostridium botulinum NCTC 2916] gi|170757676|ref|YP_001781117.1| exodeoxyribonuclease III [Clostridium botulinum B1 str. Okra] gi|226948816|ref|YP_002803907.1| exodeoxyribonuclease III [Clostridium botulinum A2 str. Kyoto] gi|152933796|gb|ABS39294.1| exodeoxyribonuclease III [Clostridium botulinum F str. Langeland] gi|169122888|gb|ACA46724.1| exodeoxyribonuclease III [Clostridium botulinum B1 str. Okra] gi|182668909|gb|EDT80885.1| exodeoxyribonuclease III [Clostridium botulinum NCTC 2916] gi|226843845|gb|ACO86511.1| exodeoxyribonuclease III [Clostridium botulinum A2 str. Kyoto] gi|295318896|gb|ADF99273.1| exodeoxyribonuclease III [Clostridium botulinum F str. 230613] gi|322805797|emb|CBZ03362.1| exodeoxyribonuclease III [Clostridium botulinum H04402 065] Length = 253 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 82/304 (26%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ SWN+N L + ++ DI+ +QE + Sbjct: 1 MRIYSWNVNGLRAVAKKNF---------------IEWIGEESPDILCIQETKLQGNQLED 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + ++S + ++ +A K + + + DS R Sbjct: 46 NIKNIDGYYSYFS----------FAVKKGYSGVATYTKVKPISVKHSIGIEKFDSEGRI- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + K +L+I+ + + + L ++ + + Sbjct: 95 --------LITEFKDFTLLNIYFPNGQRDEER-------LQYKLDFYEALFNYCDELVKE 139 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKT-------IDPNDSLIRFPKEKDSRCNA------- 247 VI GD+N N + + I+ + + Sbjct: 140 GKKLVICGDYNTAHNEIDLKNPKANEKTSGFLRIERDWLDKIIERGYTDTFRNMNPDKIK 199 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY + N + +Y SDHCP+ Sbjct: 200 YSWWSYRFKARERNAGWRIDYHFVSNNLLDRVENTEILNEVY-----------GSDHCPV 248 Query: 299 SIDY 302 ++ Sbjct: 249 MLEL 252 >gi|291298431|ref|YP_003509709.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] gi|290567651|gb|ADD40616.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] Length = 278 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 38/286 (13%), Positives = 82/286 (28%), Gaps = 53/286 (18%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 R +NI+ + + V D + + + L+ D++ LQE+ + + Sbjct: 40 RFGCFNIHHGASPDDVM-----------DLERIARRIEALNCDVIGLQEVDRFWKRSGFV 88 Query: 85 PKNTWCI------FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + W L + AV + ++ L + D Sbjct: 89 DEPAWLAERLGLEVAFGANLDLAPEEPGRPRRQYGTAVLSRWPIAESENTLLPKSGDD-- 146 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R + +++ G + HL+ S+ QA+ + + + Sbjct: 147 --EQRGLLRTVLDAPGGAFVFANTHLQHGT-----------DESVRVAQAELIIEILG-- 191 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 ++ V+ GDFN + + + N + D + ID Sbjct: 192 -DAPQRTVLVGDFNAEPGAESID------VIANRLPDAWAAAGDGDGLTYPSDNPHARID 244 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + + SDH P+S + F Sbjct: 245 FVFAAPDVKPAAMAVDAEDPS------------ASDHLPLSGTFAF 278 >gi|254292391|ref|YP_003058414.1| exodeoxyribonuclease III Xth [Hirschia baltica ATCC 49814] gi|254040922|gb|ACT57717.1| exodeoxyribonuclease III Xth [Hirschia baltica ATCC 49814] Length = 269 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 80/306 (26%), Gaps = 69/306 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +RL SWNIN + + DI+ LQE+ A Sbjct: 3 DLRLTSWNIN----------------SVRLRMPRVADFIAREKPDILCLQEIKCREAEYP 46 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + E + +A+ + L D R Sbjct: 47 L---------KAFEEAGLPYVEIAGQKGMHGVAIGSRYPLER------LETPDFCIREEA 91 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + V + G ++ +L D + T + + + ++ + + Sbjct: 92 R---AISVRVAGVEVH----NLYVPAGGDEPDPTINDKFAHKLEFLARMEKTYSARSNDS 144 Query: 203 VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P ++ GD N + + + + + + Sbjct: 145 QPLIVVGDINVAPREHDVWSHKQLLKVVSHTPIETQAVDRILKEGGFADIARVKHEDKEK 204 Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ ++ A S Y G++ SDH Sbjct: 205 LYSWWSYRAKDWEKSNRGRRLDHIWANRAATPLTDPAS-----YEIHKDDRGGEKPSDHA 259 Query: 297 PISIDY 302 P++I+ Sbjct: 260 PVTINL 265 >gi|282877907|ref|ZP_06286716.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] gi|281299908|gb|EFA92268.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] Length = 283 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 88/281 (31%), Gaps = 42/281 (14%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + ++S+NI S G + + ++ + + K+ +AD+V LQE+ S Sbjct: 38 SKNNLTVMSYNIRHCSPYIGSGVP------SPAEVGNVAKVLKDKNADVVLLQEVDSMTT 91 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 A + + + K+ A+ K ++PL D + Sbjct: 92 RAFNIDQAKELAKRAGYKYHKFFKQKDYQGGAYGAAILSKYEMKNIINHPLPKMIDGQTI 151 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 G+ + GK I++ +HL S++ + ++ + Sbjct: 152 KGSNILGSAKIVFAGKDIYIATMHL----------------SVTESERLKQFPKYLECLE 195 Query: 200 E-SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + +I GDFN + ++ N KD + + +D Sbjct: 196 PYAHKLIIIGGDFNSRPTDASI-----TMLEANG---FTRTNKDPNKFTIPSDKPNRELD 247 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 Y + ++ + G SDH PI Sbjct: 248 YIAYKPSTAVDVVSHTV-----------FTGINASDHLPIV 277 >gi|313206031|ref|YP_004045208.1| endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM 15868] gi|312445347|gb|ADQ81702.1| Endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM 15868] Length = 308 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 29/302 (9%), Positives = 85/302 (28%), Gaps = 30/302 (9%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD------ADIVFLQEMGSYNA 79 + +N+ L + + + ++ +V L E+G+ Sbjct: 8 VAFYNVENFFPPHTPYLPHWDNYKYHNKLHKTAHIFELINQYHNTLPILVGLAEIGNKTV 67 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + K + Y + +R + + + + K+ ++ + + + Sbjct: 68 LEDLLAKPVFGGNYHYLHYESPDERGIDVALLYDKNKITVKHSEPIRFKFEMKNEQGELY 127 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R + ++E NG+ +HL S D + ++ + + Sbjct: 128 EDTTRDVLHSVLEYNGETFHCFVMHLPSKREQDINLPKRNEILENINALIENI------I 181 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + ++ GDFN N + F + + + + D Sbjct: 182 IKDKEAVLVLGDFNENPNEDNLIQFTYHEGILELLHNPFSALYYLGDYSTYHKKEGLLFD 241 Query: 259 YFVMDQNAYKFL-----------------IQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + ++ ++ + + SDH P+ ++ Sbjct: 242 QIMFSRDFFQTSFGLTYKKAEVFNPTEIKNWDKMKNRPFRTYSGTRYLGGYSDHFPVLVE 301 Query: 302 YD 303 ++ Sbjct: 302 FE 303 >gi|308175792|ref|YP_003922497.1| apurinic/apyrimidinic endonuclease [Bacillus amyloliquefaciens DSM 7] gi|307608656|emb|CBI45027.1| apurinic/apyrimidinic endonuclease [Bacillus amyloliquefaciens DSM 7] gi|328555768|gb|AEB26260.1| apurinic/apyrimidinic endonuclease [Bacillus amyloliquefaciens TA208] gi|328914157|gb|AEB65753.1| apurinic/apyrimidinic endonuclease [Bacillus amyloliquefaciens LL3] Length = 252 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 80/304 (26%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L R + + ADI+ LQE + + Sbjct: 1 MKLISWNVNGL--------------RAVMKKIDINTCLQETKADILCLQETKVQDGQVSL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ + + ++ AV K + + D R Sbjct: 47 QPEGYHDYW-----------NYAVKKGYSGTAVFSKVKPLQVSYGLGIDDHDQEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++V++ + + + + Q L Sbjct: 92 -----VITLEFENVFVVNCYTPNAKRGLERIDYRLQWEADFKDYLQKLDQ--------KK 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + F + A Sbjct: 139 PVILCGDLNVAHREIDLKNPKANRKNAGFSDQEREAFSVLLNAGFTDSFRYLYPDQEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DY ++ + + Q + SDHCP+ Sbjct: 199 SWWSYRTNAREKNIGWRLDYVIVSDRLKQRITQAAIC-----------ADIMGSDHCPVE 247 Query: 300 IDYD 303 + D Sbjct: 248 MTLD 251 >gi|262408023|ref|ZP_06084571.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|262354831|gb|EEZ03923.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] Length = 292 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 80/288 (27%), Gaps = 47/288 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL S+NI T ++ K L + D+ +QE + + + Sbjct: 38 IRLASYNIRTKGDKGD--------KSWEVRLNALVDVVRRNKFDMFAIQEGRTSQ-LKDM 88 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKD----SFS 138 N + + N H AI +K +VL+ + D + Sbjct: 89 MILNEYSYI-------GRDRDGDNKGEHCAIYYKKDRFKVLKHGDFWYSETPDIPSYGWG 141 Query: 139 RAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R + GKK +V + H S +L +Q + + Sbjct: 142 ARCRRICTWGYFKDLRTGKKFYVFNSHT-----DHEATEARRQSSFMLLEQVRKIAK--- 193 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI- 255 P GDFN + ++ + K + + Sbjct: 194 -----GRPTFCTGDFNATPDEEPIQLLLKDSLLLDSYKCTLTPPKGPSGSFYAYDKTGKT 248 Query: 256 --PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 ID+ + + DD K SDH P+ ++ Sbjct: 249 AKRIDFIFVTPKIKILS--------YHTIDDDIKYNKYSSDHFPVMVE 288 >gi|53722408|ref|YP_111393.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei K96243] gi|52212822|emb|CAH38854.1| putative Endonuclease/Exonuclease/phosphatase family protein [Burkholderia pseudomallei K96243] Length = 338 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 80/285 (28%), Gaps = 56/285 (19%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 +++R+ ++NI+ T S + L AD++ LQE+ Sbjct: 47 QPRTRELRIATYNIHG-----------GLGAWTASAAERIAVVLDELRADVIALQEVPLG 95 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A + T AV + + L SF Sbjct: 96 GARGADV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----SF 147 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R A++ +E + V+ HL S + S Q L + Sbjct: 148 GNREPRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LAA 191 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 +P ++ GD N + F + + F + R + Sbjct: 192 FDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS--L 240 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D + ++L+ + +R +R SDH P+ Sbjct: 241 DRIWVHPG--EWLVDVAPH--------RSARARRASDHYPLVARI 275 >gi|319782509|ref|YP_004141985.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168397|gb|ADV11935.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 256 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 84/302 (27%), Gaps = 70/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ S+NIN ++ L + D+V LQE+ + + Sbjct: 1 MKIASFNINNINS----------------RLENLLTWLAVAKPDVVCLQELKARD----- 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + +A+ + + P+L +R Sbjct: 40 -----MQFPRSALAAAGYGAVWKGEPTWNGVAILAR------SAEPVLTRDALPGDEADR 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +NG I V ++ + + Y + L+ Q ++ + Sbjct: 89 QSRYIEAAVNG--IVVACLYAPNGNPQPGPKFAYKLAWHAR------LEAHAEQLLDTGL 140 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGD+N ++ + L K+ Sbjct: 141 PVVLAGDYNIVPEPRDIYATRSYDDNALVQPESRASFRRLLDQGWLDALRKKHPKETLYT 200 Query: 249 KNLRNKIP--------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +D+ ++ + + L D SDH P+ + Sbjct: 201 FWDYRRNRWPRDAGLRLDHILLSKKLARRLTAAGI-------DRDVRGEDGASDHAPVWV 253 Query: 301 DY 302 + Sbjct: 254 EL 255 >gi|85860240|ref|YP_462442.1| endonuclease/exonuclease/phosphatase family protein [Syntrophus aciditrophicus SB] gi|85723331|gb|ABC78274.1| endonuclease/exonuclease/phosphatase family protein [Syntrophus aciditrophicus SB] Length = 335 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 81/304 (26%), Gaps = 47/304 (15%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + K+ ++S+NI + Q+G + W L+R+ D++ LQE Sbjct: 42 SPDIGLKLNVMSFNIRRGTRQDGRNHWI-------YRRNLVREILNQYRPDVLGLQEALD 94 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + + ++ T + P + A Sbjct: 95 FQMSEVCSMLPGYEKVGIGNLGGSRGLHNAIFYDATRFLI-SDEGTFWLSDAPDIPASKG 153 Query: 137 FSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R + + + + + + HL S + L Sbjct: 154 WGNIIPRICTWARLVEKKSQQAFYFYNTHLDH------------ISLRARKKSVILLTRH 201 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT---------------IDPNDSLIRFPK 239 I ++ P V+ GDFN + + + + Sbjct: 202 IHER-PFTEPLVLTGDFNSRERSAAIQYLKGEVPLKIKIKAKVLNPVPLMDTFRVKYPDN 260 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ++ + IDY + S I + SDH P+ Sbjct: 261 RNIATFHGYRSYFFRFKIDYIFVSG---------SARVIDAEIIQRRWGKCYPSDHFPLL 311 Query: 300 IDYD 303 D Sbjct: 312 AHVD 315 >gi|328470608|gb|EGF41519.1| hypothetical protein VP10329_07407 [Vibrio parahaemolyticus 10329] Length = 317 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 100/314 (31%), Gaps = 30/314 (9%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 S ++ V+ N+ S ++ + + L+ DI+ LQE+ Sbjct: 2 SQPSRITFVTANLFNFVAPPNAYYDFENIYSQEQWRDKLAWTQNQLEKLEPDIIGLQEVF 61 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLG 132 S F + +++T + AIA R V + + L Sbjct: 62 SVEETRAYFLSFGFP-YFATVDTPKIEDEYIYSRPVVAIASRFPIEDVKRVEFDSNSLTP 120 Query: 133 AKDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLD-------SLENTYSPSCSLL 184 + + +R+ + +V I + HLKS D S S Sbjct: 121 FGVNEAPDFSRKPIYAQVVHPVLGHIAIYVTHLKSQRPADTDTPEPSSRAMARWLSTQQR 180 Query: 185 SQQAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 +A L+D + Q + +P V+ GD N+ I+ N+ +T + + ++ Sbjct: 181 GWEAAMLRDAMQAQYRAHPIPTVLMGDMNQPISKESVNNVLTETFSDSVTELQLKDGWHL 240 Query: 244 RCN--------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRG 289 + + + +DY ++ Q I Y + Sbjct: 241 QTGSSLEVRPATHYHFSTGNVLDYILLSQEFDTHSDVSVAEVIDYQVLEQHLINPSYEND 300 Query: 290 KRLSDHCPISIDYD 303 K SDH +S+ + Sbjct: 301 KNASDHAFVSLTVE 314 >gi|332305999|ref|YP_004433850.1| exodeoxyribonuclease III [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173328|gb|AEE22582.1| exodeoxyribonuclease III [Glaciecola agarilytica 4H-3-7+YE-5] Length = 269 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 77/309 (24%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN + L+ DI+ LQE+ +N + Sbjct: 1 MKIISFNING----------------IRARLHQLKALIDKHQPDIIGLQEIKVHNDM--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K Q G A R Sbjct: 42 -------FPVADVEAMGYKVYFHGQKAHYGVAMLCKEEPSDVQ----YGFPTDDEDAQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + NG+ + VL+ F ++ + + L ++ Sbjct: 91 MIMVSYPMPNGETVRVLN-----GYFPQGENRSHETKFPAKRKYYEDLSTYLNTHHTPDE 145 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 V+ GD N L + + F Sbjct: 146 NVVVMGDVNISHTDLDIGIGEPNRKRWLQTGKCSFLPEERLWLNDLIDWGFSDGFRTLNP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + ID + + ++ L D ++ S Sbjct: 206 ETNEHFSWFDYRSKGFLDNRGLRIDLILATKKLHESLSDAGI-------DYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI +Y Sbjct: 259 DHAPIWAEY 267 >gi|46143793|ref|ZP_00134262.2| COG0708: Exonuclease III [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|165976406|ref|YP_001651999.1| exonuclease III [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|307245885|ref|ZP_07527970.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307247975|ref|ZP_07530006.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307250227|ref|ZP_07532183.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307252613|ref|ZP_07534507.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307254858|ref|ZP_07536684.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307257023|ref|ZP_07538799.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307259300|ref|ZP_07541029.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307261462|ref|ZP_07543133.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307263645|ref|ZP_07545256.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|165876507|gb|ABY69555.1| exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|306853245|gb|EFM85465.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306855529|gb|EFM87701.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306857756|gb|EFM89856.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859935|gb|EFM91954.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306862229|gb|EFM94197.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306864507|gb|EFM96414.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306866667|gb|EFM98526.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306868857|gb|EFN00663.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871022|gb|EFN02755.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 280 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 37/323 (11%), Positives = 85/323 (26%), Gaps = 77/323 (23%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 F + + +++ +S+NIN L + L + D++ L Sbjct: 2 FALSVVSIWILRMKFISFNINGL----------------RARPHQLEAIIEKHQPDVLGL 45 Query: 72 QE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 QE + + + + +F+ H +A+ K + + Sbjct: 46 QEIKVADEDFPWDLVNHLGYHVFHH------------GQKGHYGVALLTKKEPLAVRKGF 93 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 D+ R + +E + VL+ F ++ + Sbjct: 94 PTDNADAQKR-----MIMADIETEFGVLTVLN-----GYFPQGENRSHETKFPAKEKFYA 143 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINY---------------------LGNNDDFWKTI 228 L+ ++ + P VI GD N L ++ + Sbjct: 144 DLQHYLESELSPENPIVIMGDMNISPTDLDIGIGEPNRKRWLRDGKCSFLPEEREWLDRL 203 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEIL 279 + F + + ID + + + ++ Sbjct: 204 YSYGLIDTFRAMNPQANDKFSWFDYRSKGFDDNRGLRIDLVLASKGLAERCVETGI---- 259 Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302 D ++ SDH P+ + Sbjct: 260 ---DLEIRAMEKPSDHSPVWAVF 279 >gi|303237736|ref|ZP_07324296.1| endonuclease/exonuclease/phosphatase family protein [Prevotella disiens FB035-09AN] gi|302482188|gb|EFL45223.1| endonuclease/exonuclease/phosphatase family protein [Prevotella disiens FB035-09AN] Length = 348 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 102/352 (28%), Gaps = 64/352 (18%) Query: 2 IRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSEQEGVSLWKN-----------S 46 ++KY+ L F ++ AS AQK + +N L + + + Sbjct: 1 MKKYLFFLTFAMLFSVASNAQKKFSVYAVGFYNQENLFDYTHDEGKNDYDFTPDGSYKWN 60 Query: 47 VKRTTSDYTLLRQYAKNLDAD--------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + S + + + D I+ L E+ + + + + + + Sbjct: 61 KMKYESKLRNMSKVLSEMGTDVLPNVGCAIIGLSEVENAHVLDDLTAQP---ALAARNYK 117 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 H + I A+ K ++ P + + S R + + + + + Sbjct: 118 YVHIEGPDRRGIDCALLYNPKMFKIRNTKLVPYVYELPNDSNRATRGFLTVSGTLANEHV 177 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 V+ H S Q + LKD + +++ V ++ GD N Sbjct: 178 TVVVCHWPSRGAGSYYRELGGK-------QVKALKDSL-LREDPNVKVLVMGDMNDDPTN 229 Query: 218 LGNND------DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 ++ + + + + + + D VM N Sbjct: 230 KSMHECLSAKANIDEVGEGDMYNPFYNILVKEGTGTLQYQGKWNLFDQIVMTPNMLNKNN 289 Query: 272 QESFSEILYNEDDIKSRGK-----------------------RLSDHCPISI 300 Q+ FS + + + I R SDH P+ + Sbjct: 290 QKDFSTLKFWRNQIFRRDYLFQETGKYKGNTKRTTAGGVWLDGYSDHLPVVV 341 >gi|253565030|ref|ZP_04842486.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 3_2_5] gi|251946495|gb|EES86872.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 3_2_5] Length = 344 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 41/326 (12%), Positives = 84/326 (25%), Gaps = 56/326 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67 R+V WN + SL + + +R + + + Sbjct: 24 PFRVVFWNTENFFDTRHDSLKNDMEFLPHSMRHWNHRRYKKKLDNVARTLTAIGEWNFPA 83 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 ++ L E+ + + + + + I+ A+ ++ ++L Sbjct: 84 LIGLCEVENDTVMRDL---TLYSPLKEAGYRYVMTHCSDLRGINVALLYQRDRFKLLS-- 138 Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y L + R + + + + G + ++ HL S S Sbjct: 139 YSALSVGNFKGHRPTRDILHVSGLLLTGDTLDIMVAHLPSRSGGV------RQSEPYRLY 192 Query: 187 QAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKT------IDPNDSLIRFP 238 AQ LKD +I GDFN + Sbjct: 193 AAQKLKDAADSLINVRPSAKLIIMGDFNDYPTDKSVVQVLQALSPEVSTHHDRLYHLLAR 252 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI-------------------- 278 K KD + K +D+ ++ E Sbjct: 253 KAKDRNFGSYKYQGEWGLLDHLIVSGTLLDISGTLFTEEKKANVARLPFLLTKDEKYGGM 312 Query: 279 -LYNEDDIKSRGKRLSDHCPISIDYD 303 + + SDH P+ +D++ Sbjct: 313 QPFRTYVGMKYQEGYSDHLPVYVDFE 338 >gi|255532421|ref|YP_003092793.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] gi|255345405|gb|ACU04731.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] Length = 576 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 78/286 (27%), Gaps = 56/286 (19%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A+ ++++ L+++NI + + D+V LQE+ Y Sbjct: 345 AAQSEEITLMTYNIQLAGSG----------------LQTIANVITAQNPDLVCLQEVDKY 388 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + T SK + A+ K Y L Sbjct: 389 TNRSGTSINQAEELGKLTGMYYYFSKAMDFDGGEYGDAILSKWPLYEITRYVLPAGTG-- 446 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R+ + E NG HL + QA + + +T Sbjct: 447 ---EPRQMAVIRTEKNGAMFNFAGTHLDHLGP----------AAGNSLLQATAINNIVTG 493 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 PF++ GDFN + + K S ++ + I Sbjct: 494 IS---YPFILGGDFNEIPSSVTIAKLKEKFTLGCISSCPATHPSNAATRS---------I 541 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 DYF+ F+ + Y + SDH P+ Sbjct: 542 DYFMSRPG--------GFNVLSYGTINTL-----ASDHLPVVATVT 574 >gi|229104299|ref|ZP_04234968.1| Exodeoxyribonuclease [Bacillus cereus Rock3-28] gi|229117223|ref|ZP_04246601.1| Exodeoxyribonuclease [Bacillus cereus Rock1-3] gi|228666123|gb|EEL21587.1| Exodeoxyribonuclease [Bacillus cereus Rock1-3] gi|228678997|gb|EEL33205.1| Exodeoxyribonuclease [Bacillus cereus Rock3-28] Length = 252 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 86/305 (28%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + +Y + +ADI LQE+ + + Sbjct: 1 MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQSGQIDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ + + + ++ A+ K + + D R Sbjct: 47 NPEGYYTYW-----------NYAVKKGYSGTAIFTKKEPLSVTYGLGIEEHDQEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + + L + Sbjct: 92 -----VITLEFEDFYMITLYTPNSKRGLERLDYRMEWEDDFRTYIKQL--------DEKK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V GD N + + + I + + ++ A Sbjct: 139 PVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTRILEEGFVDTYRHLYPNQEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV+ + + D + SDHCP+ Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERIKGQI-----------TDAKINSEIMGSDHCPVE 247 Query: 300 IDYDF 304 + +F Sbjct: 248 LHINF 252 >gi|299770919|ref|YP_003732945.1| putative extracellular nuclease [Acinetobacter sp. DR1] gi|298701007|gb|ADI91572.1| putative extracellular nuclease [Acinetobacter sp. DR1] Length = 812 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 91/331 (27%), Gaps = 50/331 (15%) Query: 15 PCTASVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFL 71 A +R+ S+N+ N + G + + + D + K +DAD+ L Sbjct: 455 SVLTKNANHIRVASFNVLNYDNGATGFPTERGATTQAEFDKQHRKIVSALKAIDADVYGL 514 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYP 129 E+ + N S + + R + I AI K V+ L + Sbjct: 515 MEIANNGYGPNSAIANLTKALGSDWKYVVPENLDRLGGDAIAVAIIYNSKRVKPLNKPVV 574 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS------- 182 L D + A K V+ HLKS N+ Sbjct: 575 L----DLGDKNRTTLAQSFQAVRGNKTFTVIPNHLKSKSCSGVDANSTDADQKDGQGCWN 630 Query: 183 -LLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + + W+ + ++ GD N + N ++ Sbjct: 631 PTRVKAVDQIVQWLAKNPTQVQKQNALLVGDMN----SYAKEEPILSFEKANYKVLLNDT 686 Query: 240 EKDSRCNANKN----------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +D+ + D Y +++ I +E + Sbjct: 687 KVGQGTQAYSYVYGVASDANGNGGAGNLDHAIADAALYPKVVRTFAWHINADEPTVLDYN 746 Query: 290 -----------------KRLSDHCPISIDYD 303 R SDH P+ +D D Sbjct: 747 EEYKTDEQKALFFGEDAYRSSDHDPVIVDLD 777 >gi|87201202|ref|YP_498459.1| exodeoxyribonuclease III [Novosphingobium aromaticivorans DSM 12444] gi|87136883|gb|ABD27625.1| exodeoxyribonuclease III [Novosphingobium aromaticivorans DSM 12444] Length = 263 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 32/306 (10%), Positives = 80/306 (26%), Gaps = 71/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + +WNIN + ++ D++ LQE+ +V Sbjct: 2 ISVATWNIN----------------SVRLRADQVERFLLQEAPDVLCLQEIKCAESV--- 42 Query: 84 FPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + ++ R + +A + + ++ Sbjct: 43 -------FPHEVFEKLGYTHRAIHGQKGYHGVATVSRIPFRDFSRHDWQDNGEARH---- 91 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + + + G + + ++++ + + Q+ +L+ ++ Sbjct: 92 ---IGVELLGPGNGLILENVYIPAG-----GDVADREVNPKFGQKLDFLERMTRWAEKIE 143 Query: 203 VPFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCN 246 P +I GDFN D + D + + K + Sbjct: 144 RPTLIVGDFNIAPLECDVYDHKALLKVVSHTPLEVETLQRFADAHGWVDLGRKHIPAPER 203 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ A F E + + SDH P Sbjct: 204 NYSWWSYRSYWRAKDQGRRLDHMWASPEAAAQTRGHRFVEET-------RKWDQPSDHIP 256 Query: 298 ISIDYD 303 + + D Sbjct: 257 LITELD 262 >gi|33239934|ref|NP_874876.1| exonuclease III [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237460|gb|AAP99528.1| Exonuclease III [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 276 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 89/305 (29%), Gaps = 69/305 (22%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 +WN+N + + + ++ D++ LQE K+FP Sbjct: 3 FATWNVN----------------SIRTRLSQVEEFLDETQPDLLCLQE---TKVEDKLFP 43 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV---RVLQQSYPLLGAKDSFSRAGN 142 + + + + +A+ L S L+ + S Sbjct: 44 RE-------SIEKRGYQVSFYGQKAYNGVALISNQKLDDIRLGISGELVNNQVSTFLDEQ 96 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +R + L+ I V+++++ + LDS + Y + LK + ++E Sbjct: 97 KRIISALIN----GIRVVNVYVPNGSSLDSEKYIYK------LKWLDHLKKYFESQEERS 146 Query: 203 VPFVIAGDFNRKINYLGNNDD------FWKTIDP--------NDSLIRFPKEKDSRCNAN 248 P + GDFN + ++ ++ L + ++ Sbjct: 147 EPLCLMGDFNIVLEEKDIHNPKRFNNGIMASLSEREALQNVLGTRLEDVFRLFEADTGHW 206 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ + + + SDH P+ Sbjct: 207 SWWDYRSGAWQKDQGWRIDHIYLSEELINNARSCVIH-------KKARGNIQPSDHAPVL 259 Query: 300 IDYDF 304 +D ++ Sbjct: 260 VDINW 264 >gi|308274774|emb|CBX31373.1| hypothetical protein N47_E48850 [uncultured Desulfobacterium sp.] Length = 335 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 31/304 (10%), Positives = 82/304 (26%), Gaps = 47/304 (15%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 +++ ++++S+NI + ++G + W +L+ + D++ LQE Sbjct: 41 SVPNISLNLKIMSFNIRRGTARDGKNHW-------KYRRSLVHEILDLYCPDVLGLQEAL 93 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + + + + P + Sbjct: 94 DFQIPEISAMLPGYKNVGIGDL-GGSKRLHNTIFYDANRFELSEEGTFWLSDTPDIPRSK 152 Query: 136 SFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + R + + + +G+ + + HL + +L Sbjct: 153 GWGNIMPRICTWVRLIEKNSGQAFYFYNTHLDHLSQGS------------RKKSVIFLIK 200 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT---------------IDPNDSLIRFP 238 I + PF++ GDFN + K+ + + Sbjct: 201 RIHARSYPD-PFILTGDFNARERSAPIQYLKGKSPLRIKTKLTVINPTPLVDTFRVRHPK 259 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + +DY + S + ++ + SDH P+ Sbjct: 260 NRNSVTFHGFRKYFFRFRLDYIFV---------PSSVRVLDAKIIQLRWKKCYPSDHFPL 310 Query: 299 SIDY 302 Sbjct: 311 FTHI 314 >gi|298376208|ref|ZP_06986164.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] gi|298267245|gb|EFI08902.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] Length = 246 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 88/308 (28%), Gaps = 67/308 (21%) Query: 2 IRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 +++ + L L+ + + + +R++S+NI ++ + Sbjct: 1 MKRILFLLTIALLNLGSGLCKTRQSLRIMSYNIR-----------IGIGMDQQTNLKRIA 49 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + + D V LQE+ S + + T + Sbjct: 50 EVINKIQPDYVGLQEVD------------------SVCERSGWINQYAELARLTGM---Y 88 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + L + SR R + + + L + ++ ++ + Sbjct: 89 PIFAPATERSKGLYGIAALSRKKPRSYQYIPLPGKEEPRTFLCLEYPNYTLCNTHFSLDP 148 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIR 236 S + ++ K P +I GDFN + + W+ + Sbjct: 149 DS------RLASIRLINETMKSENKPILITGDFNMEPDSKEFKTMKQTWRLLSD------ 196 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + ++ +DY D +I + +I + SDH Sbjct: 197 ------PTLETYPSDHPRLRLDYIFGDLRHEFRIINDQVIDI------------QSSDHL 238 Query: 297 PISIDYDF 304 PI ID F Sbjct: 239 PIYIDVLF 246 >gi|206562702|ref|YP_002233465.1| putative endonuclease/exonuclease/phosphatase family protein [Burkholderia cenocepacia J2315] gi|198038742|emb|CAR54703.1| putative endonuclease/exonuclease/phosphatase family protein [Burkholderia cenocepacia J2315] Length = 618 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 81/315 (25%), Gaps = 47/315 (14%) Query: 23 KVRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEM 74 VR+VS+N+ N + + R + + L AD++ L E+ Sbjct: 296 DVRVVSFNVFNYFNGDGHGGGFDAPGNRGAKTPAAFARQEAKIVAALRALRADVIGLMEI 355 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + R ++ R + I A+ + V P+ A Sbjct: 356 ANNGHGDASAIRRLAAQLGDGWRTVDPGTARLGRDAIAVALLYDSRTVE------PVGRA 409 Query: 134 KDSFSRAGNRRAVELLVEINGKK--IWVLDIHLKSFCFLDSLENTYSPSCSLLSQ----- 186 +R + G V HLKS + S Sbjct: 410 ATVALGGRHRPPLAQTFRRIGGTHAFTVAVNHLKSKNCPHASGANLDQSDGQGCWNAART 469 Query: 187 -QAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 A + DW+ + ++ GD N + ++ + Sbjct: 470 RAAARVADWLATSPTGVAAGGVLLIGDLNSYAKEDPV-----RALEARGYANLVARFVGD 524 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIK 286 + +D+ + + F I +E Sbjct: 525 AAYSYVFRGEAGNLDHALATPPLAARVKAVRFWHINADEPLVLQPVPDYKTSARRSTYYA 584 Query: 287 SRGKRLSDHCPISID 301 R SDH P+ ID Sbjct: 585 PDAYRSSDHDPVVID 599 >gi|91216737|ref|ZP_01253702.1| hypothetical protein P700755_08744 [Psychroflexus torquis ATCC 700755] gi|91185206|gb|EAS71584.1| hypothetical protein P700755_08744 [Psychroflexus torquis ATCC 700755] Length = 370 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 41/356 (11%), Positives = 97/356 (27%), Gaps = 65/356 (18%) Query: 3 RKYVLALVFFLVPCTASV--------AQKV---RLVSWNINTLSEQEGVSLWKN------ 45 R L + L C++ +++ + +N+ L + E + Sbjct: 8 RGLFLGFIVLLSSCSSVQKTTPTSQESEEFLINTIGFYNLENLFDTEDDPTKFDESSPLM 67 Query: 46 ------SVKRTTSDYTLLRQYAKNLD-------ADIVFLQEMGSYNAVAKVFPKNTWCIF 92 + + + +L ++ + E+ ++N + + ++ + Sbjct: 68 EIAEGERETIYRAKVANMAKVIADLGSEVTGKPPAVIGVCEVENFNVLQDLVNDHSLSGY 127 Query: 93 YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSFSRAGNRRAVELL 149 N I A+ RK R + L D R R + + Sbjct: 128 DYGIIHYNSP---DARSIDVALLYRKSIFRPIHSKAHELVLYSDIDRTKRKYTRDQLYVK 184 Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209 +++G+++ + H S + + + L+ + +KD I + + +I G Sbjct: 185 GKLDGEEMHFIVNHWPSRRGGEKRSRPNRVNAAKLT---KKIKDSIQTQ-DPYAKILIMG 240 Query: 210 DFNRKINYLGNND-----DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 DFN + +F + + K D ++ + Sbjct: 241 DFNDGPYNESIKEVLEAQEFSENLGIRGLYNPLEKLFKKGIGTIAWRDTWDLFDMILVSR 300 Query: 265 NAYKFLIQES--------------------FSEILYNEDDIKSRGKRLSDHCPISI 300 S F + SDH P+ + Sbjct: 301 PLIHTTDYSSYTLYQANIFNPYYLQNPKGRFKGYPFRSFADGGFTNGYSDHFPVYL 356 >gi|270293603|ref|ZP_06199805.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270275070|gb|EFA20930.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 352 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 41/350 (11%), Positives = 92/350 (26%), Gaps = 65/350 (18%) Query: 8 ALVFFLVPCTASVAQ------KVRLVSWNINTLSEQEGVSLWKNSV-----------KRT 50 ++F L P + Q R+VS+N+ L + +L + + Sbjct: 9 VILFLLCPYISLYGQEGRDTLTFRIVSYNVENLFDFRHDTLKNDYEFLPDATRHWNYSKY 68 Query: 51 TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 + + +V L E+ + + + + + + ++ Sbjct: 69 RKKLDNIARVIIATGGWTPPALVALCEVENDSVMRDL---TRYSALREADYRYVMTQSPD 125 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLK 165 I A+ ++ ++L L K + R + + + +N + VL H Sbjct: 126 ERGIDVALLYQRNLFKLLSYQ-SLPVDKPRKNSRPTRDILHVSGLLLNRDTLDVLVAHFP 184 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDD 223 S S A+ +K I V+ GDFN + Sbjct: 185 SRSGG------ARESEPYRLLAARKVKHAIDSLYTIRRHPQIVLLGDFNDYPENKSVKEV 238 Query: 224 F--------WKTIDPNDSLIRFPKE--KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273 ++ P + + K +D+ ++ + Sbjct: 239 LEAAAPSTLQDSLRPQKLYHLLAGKAKTRKHFGSYKYQGEWGLLDHIIVSGTLLQEHAPL 298 Query: 274 SFSEI---------------------LYNEDDIKSRGKRLSDHCPISIDY 302 E ++ SDH P+ ++ Sbjct: 299 YTEEAKADVFCLPFLLTRDKKYGGQQPFHTYYGMKYQGGYSDHLPVYAEF 348 >gi|237716422|ref|ZP_04546903.1| conserved hypothetical protein [Bacteroides sp. D1] gi|229444069|gb|EEO49860.1| conserved hypothetical protein [Bacteroides sp. D1] Length = 279 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 80/288 (27%), Gaps = 47/288 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL S+NI T ++ K L + D+ +QE + + + Sbjct: 25 IRLASYNIRTKGDKGD--------KSWEVRLNALVDVVRRNKFDMFAIQEGRTSQ-LKDM 75 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKD----SFS 138 N + + N H AI +K +VL+ + D + Sbjct: 76 MILNEYSYI-------GRDRDGDNKGEHCAIYYKKDRFKVLKHGDFWYSETPDIPSYGWG 128 Query: 139 RAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R + GKK +V + H S +L +Q + + Sbjct: 129 ARCRRICTWGYFKDLRTGKKFYVFNSHT-----DHEATEARRQSSFMLLEQVRKIAK--- 180 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI- 255 P GDFN + ++ + K + + Sbjct: 181 -----GRPTFCTGDFNATPDEEPIQLLLKDSLLLDSYKCTLTPPKGPSGSFYAYDKTGKT 235 Query: 256 --PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 ID+ + + DD K SDH P+ ++ Sbjct: 236 AKRIDFIFVTPKIKILS--------YHTIDDDIKYNKYSSDHFPVMVE 275 >gi|296138207|ref|YP_003645450.1| exodeoxyribonuclease III Xth [Tsukamurella paurometabola DSM 20162] gi|296026341|gb|ADG77111.1| exodeoxyribonuclease III Xth [Tsukamurella paurometabola DSM 20162] Length = 289 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 76/304 (25%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + L ++ + D+V LQE+ K+ Sbjct: 1 MRVATWNVN----------------SVKQRHGRLLEWLDSRQPDVVCLQEL-------KL 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + AV + + + GA R Sbjct: 38 TDDAFATLIGPDLTERGYEFATAGQPQWNGSAVLSRVG-LDDVVVGIPGAPAFDGTVEGR 96 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + I V ++ + + S Y +WL Q V Sbjct: 97 AISAVC-----AGIRVHSLYTPNGREVGSDHYAYK---------LEWLAALRDQVSADSV 142 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N D + ++ +E Sbjct: 143 PQLVCGDMNIAPTDEDVFDPAAFAGHTHVTEPERDALRALEDLGLRDVV-REHWPTDQVF 201 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID + D +GK SDH P+ Sbjct: 202 SYWDYRAGMFNKNLGMRIDLILASGPVADRTAAAWI-------DRQARKGKGPSDHAPVM 254 Query: 300 IDYD 303 +D D Sbjct: 255 LDLD 258 >gi|84684871|ref|ZP_01012771.1| exodeoxyribonuclease III [Maritimibacter alkaliphilus HTCC2654] gi|84667206|gb|EAQ13676.1| exodeoxyribonuclease III [Rhodobacterales bacterium HTCC2654] Length = 267 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 84/305 (27%), Gaps = 66/305 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ S+NIN + + + D+V QE+ S Sbjct: 1 MKIASYNING----------------IKARLPAVTDWLTEAQPDVVIFQEIKS------- 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY---PLLGAKDSFSRA 140 +N + ++ +A+ K +D Sbjct: 38 VDENFPREHFEDM---GYNVETHGQKSFNGVAILSKRPLEDVTRGLPGAEGTGRDGEDDE 94 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R +E V + + + ++L + + + Y + + L+ + Sbjct: 95 QARY-IEATVLGDRNAVRICGLYLPNGNPVGDEKFAYK------LRWMERLEKRAKELLA 147 Query: 201 SLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 PF++AGD+N + FW+ + + + + + Sbjct: 148 LEQPFLMAGDYNVIPQGIDALHPENWRDDALFQPESRGAFWRLQNLGLTEAFRARNQAAE 207 Query: 245 CNANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + ID+F++ L D + SDH P Sbjct: 208 QFTFWDFQRGAWQRNDGIRIDHFLLSPQCADLLEDCQI-------DKEVRGRDKPSDHVP 260 Query: 298 ISIDY 302 I ++ Sbjct: 261 IWVEL 265 >gi|83858693|ref|ZP_00952215.1| hypothetical protein OA2633_04301 [Oceanicaulis alexandrii HTCC2633] gi|83853516|gb|EAP91368.1| hypothetical protein OA2633_04301 [Oceanicaulis alexandrii HTCC2633] Length = 263 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 40/298 (13%), Positives = 80/298 (26%), Gaps = 66/298 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + + SWN+N + + + K D+ LQE+ + V + Sbjct: 2 TLSVASWNVN----------------SIKARLPNVLDWLKEASPDVACLQEIKT---VDE 42 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP+ + ++ + +A+ K L G + Sbjct: 43 GFPRLE-------IEELGYNVETVGQKTYNGVALLSKRPIEEISQRALPGDDEDDQARY- 94 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +E ++ + + V I+L + + Y + + LK Sbjct: 95 ---IEAVISADSGPVRVASIYLPNGNPAPGPKYDYKLA------WMKRLKAHARSLLAFE 145 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNAN 248 P ++AGD+N +D D + D R + Sbjct: 146 EPVILAGDYNLIPRDSDVHDAAAWEGDALIRPESRDAFAKILWLGYSEAFMQADGRAHQY 205 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ ++ A L ++ SDH P Sbjct: 206 TFWDYQAGAWQKNNGIRIDHLLLSPQAADRLKAVEI-------AKDVRGKEKASDHVP 256 >gi|78066923|ref|YP_369692.1| exodeoxyribonuclease III [Burkholderia sp. 383] gi|77967668|gb|ABB09048.1| Exodeoxyribonuclease III [Burkholderia sp. 383] Length = 258 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 31/300 (10%), Positives = 78/300 (26%), Gaps = 68/300 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + D++ LQE Sbjct: 1 MKIATWNVNSLN----------------VRKQHVLDWLAQSGTDVLCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ + L + + Sbjct: 35 LKLPDEKFPRAELEAAGYRSWFTGQKTYNGVAILAR--DTLSVDESDVVRNIPGFDDPQQ 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R V V+ + ++ + + DS + Y Q L+ W+ + + Sbjct: 93 RVVAATVD----GVRIVSAYFPNGQAPDSDKFVYK------MQWLDALQAWLRTELQRYP 142 Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249 + GD+N +D + P + + + Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLIELGFVDAFRRFEQPEKTFT 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ + D ++ SDH P+ Sbjct: 203 WWDYRMMAFRRNAGLRIDHVLLSPALAETCTSCEV-------DRTPRTWEQPSDHTPVVA 255 >gi|127514121|ref|YP_001095318.1| endonuclease/exonuclease/phosphatase [Shewanella loihica PV-4] gi|126639416|gb|ABO25059.1| Endonuclease/exonuclease/phosphatase [Shewanella loihica PV-4] Length = 871 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 43/377 (11%), Positives = 97/377 (25%), Gaps = 87/377 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS-------DYTLLRQYAKNLDAD 67 + +R+ S+N+ + R + T + ++AD Sbjct: 458 APAIATKGDIRVASFNVLNFFNNAVGGDDTPADNRGANTEEEMLLQRTKIVNAITAMNAD 517 Query: 68 IVFLQEMGSY------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAI 114 IV L E+G+ +A+ F + + +D I + Sbjct: 518 IVGLMEIGNNGFGEKSAIQNLLDALNAELSDADAYSFVEINDADKYQGKFVGSDAITVGM 577 Query: 115 AVRKKNVRVLQQSYPLLGAKD------------------SFSRAGNRRAVELLVEINGKK 156 R V ++ + + R ++ +I+ ++ Sbjct: 578 LYRAAKVTPSGDAFLIATPEQHATAGVVTRGEGDKAELSPAFDKYQRHSLGQTFKIHDEQ 637 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSC-----------SLLSQQAQWLKDWITQKKE----- 200 + V+ HLKS + A+ + D + K Sbjct: 638 LTVVVNHLKSKGSGCVEDWANYEDNSDPADLQGKCNEFRVSAAKVIGDALQDVKGDLLVI 697 Query: 201 -------SLVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPKE 240 P + DF+ + W T+D + K Sbjct: 698 GDMNAYGKEDPIRVLTDFDAANSDRDIMTASWTTLDGKVYEREGSKIEKGYGLINLNTKV 757 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--------- 291 + +D+ + + + + ++ I E ++ G + Sbjct: 758 HGPDTYSYSYNGELGNLDHALANTSLAERVLDIQDWHINAVESNLFEYGSKYTGELAKSE 817 Query: 292 ----LSDHCPISIDYDF 304 SDH P+ + + Sbjct: 818 NAFSASDHDPVIVALSY 834 >gi|206560581|ref|YP_002231346.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia cenocepacia J2315] gi|198036623|emb|CAR52521.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia cenocepacia J2315] Length = 258 Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 32/300 (10%), Positives = 80/300 (26%), Gaps = 68/300 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + D++ LQE Sbjct: 1 MKIATWNVNSLN----------------VRKQHVLDWLAQSGTDVLCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ ++ V+ +S + F R Sbjct: 35 LKLPDEKFPRADLEAAGYRSWFTGQKTYNGVAILARDTLVVDESDVVRNIP-GFDDPQQR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++ + + LDS + Y Q L+ W+ + + Sbjct: 94 VIAATV-----DGVRIVSAYFPNGQALDSDKFVYK------MQWLDALQAWLRTELQRYP 142 Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249 + GD+N +D + P + + + Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLIELGFVDAFRRFEQPEKTFT 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ D ++ SDH P+ Sbjct: 203 WWDYRMMAFRRNAGLRIDHILLSPELAATCASCEV-------DRTPRTWEQPSDHTPVVA 255 >gi|167837200|ref|ZP_02464083.1| exodeoxyribonuclease III [Burkholderia thailandensis MSMB43] Length = 258 Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 88/304 (28%), Gaps = 72/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ +WN+N+L+ + + D D++ LQE + Sbjct: 1 MKIATWNVNSLN----------------VRKQHVLDWLAQSDVDVLCLQELKIPDEKFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +++ ++ N AI R + + F + Sbjct: 45 EALEAAGYRSWFAGQKTYN----------GVAILARARLPFDEADVVRNIPG---FEDSQ 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + ++ + ++ + + LDS + Y Q L+ W+ ++ + Sbjct: 92 QR-LIAATID----GVRIVSAYFPNGQALDSEKFVYK------MQWLDALQAWLKRELQR 140 Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNA 247 + GD+N +D + P + + D Sbjct: 141 YPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLVALGFVDAFRRFDQPEKT 200 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ++ ID+ ++ + + D + ++ SDH P+ Sbjct: 201 FTWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTV-------DRVPRTWEQPSDHTPV 253 Query: 299 SIDY 302 Sbjct: 254 VAQI 257 >gi|150008523|ref|YP_001303266.1| hypothetical protein BDI_1909 [Parabacteroides distasonis ATCC 8503] gi|256841460|ref|ZP_05546967.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|149936947|gb|ABR43644.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] gi|256737303|gb|EEU50630.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 246 Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 88/308 (28%), Gaps = 67/308 (21%) Query: 2 IRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 +++ + L L+ + + + +R++S+NI ++ + Sbjct: 1 MKRILFLLTIALLNLGSGLCKTRQSLRIMSYNIR-----------IGIGMDQQTNLKRIA 49 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + + D V LQE+ S + + T + Sbjct: 50 EVINKIQPDYVGLQEVD------------------SVCERSGWINQYAELARLTGM---Y 88 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + L + SR R + + + L + ++ ++ + Sbjct: 89 PIFAPATERSKGLYGIAALSRKKPRSYQYIPLPGKEEPRTFLCLEYPNYTLCNTHFSLDP 148 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIR 236 S + ++ K P +I GDFN + + W+ + Sbjct: 149 DS------RLASIRLINETMKSENKPILITGDFNMEPDSKEFKAMKQTWRLLSD------ 196 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + ++ +DY D +I + +I + SDH Sbjct: 197 ------PTLETYPSDHPRLRLDYIFGDLRHEFRIINDQVIDI------------QSSDHL 238 Query: 297 PISIDYDF 304 PI ID F Sbjct: 239 PIYIDVLF 246 >gi|77736625|ref|NP_001029987.1| deoxyribonuclease gamma [Gallus gallus] gi|73532981|gb|AAZ76744.1| DNase-gamma [Gallus gallus] Length = 307 Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 87/306 (28%), Gaps = 36/306 (11%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 +L F + C + +R+ S+N+ + E + + + Sbjct: 1 MLLFALFSLLCFNP-SLSLRICSFNVRSFGE---------AKIGRAEVLDAVVKIISRC- 49 Query: 66 ADIVFLQEMGSYN------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 DI+ L E+ V ++ + + + R S + + A R+ Sbjct: 50 -DIMLLMEIKENKNRMCPLLVQQLAGQTKGNREEYSCVVSGRLGRKSYKEQY-AFLYRRN 107 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 V V +Q+Y + A +R + + I + E Sbjct: 108 LVSV-KQTYQYPDTQPGDEDAFSREPFVVWFRSPKTAVKEFAIVPLH----TAPEMAVRE 162 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 L + W FV GDFN +Y+ + + Sbjct: 163 IDELYDVYLDIKQHW------DTENFVFMGDFNAGCSYVPRKHWKNIRLRTSSEFAWLIG 216 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRL--SDHC 296 + + P D V+ + ++ S + + S + L SDH Sbjct: 217 DTNDTTVRRST---SCPYDRIVVSGEQLSQAVVPHSATIFDFQTAFQMSEEQALGVSDHF 273 Query: 297 PISIDY 302 P+ + Sbjct: 274 PVEFEL 279 >gi|33152736|ref|NP_874089.1| exonuclease III [Haemophilus ducreyi 35000HP] gi|1388153|gb|AAB49625.1| exonuclease III [Haemophilus ducreyi] gi|33148960|gb|AAP96478.1| exodeoxyribonuclease III [Haemophilus ducreyi 35000HP] Length = 267 Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 82/311 (26%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L D++ LQE + + Sbjct: 1 MKFISFNINGL----------------RARPHQLEAIINKHQPDVIGLQEIKVADEDFPH 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + +F H +A+ K + + D+ R Sbjct: 45 QLVEHLGYHVF------------YHGQKGHYGVALLTKKQPLTIRKGFPNDTADAQKR-- 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + + + VL+ F + ++ L+ ++ + Sbjct: 91 ---MIMAEINTDFGILTVLN-----GYFPQGENRQHETKFPAKAKFYADLQHYLETALTA 142 Query: 202 LVPFVIAGDFNR---------------------KINYLGNNDDFWKTIDPNDSLIRFPKE 240 P +I GD N K ++L ++ + + F Sbjct: 143 YNPIIIMGDMNICSTDLDIGIGEANRKRWLREGKCSFLPEEREWLDRLYHYGLVDTFRAM 202 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + ID + ++ D ++ Sbjct: 203 HPTTTDQFSWFDYRSKGFNDNRGLRIDLILASTTLANHCVETGI-------DLEIRAMEK 255 Query: 292 LSDHCPISIDY 302 SDH PI + Sbjct: 256 PSDHAPIWAVF 266 >gi|126739465|ref|ZP_01755158.1| exodeoxyribonuclease III [Roseobacter sp. SK209-2-6] gi|126719565|gb|EBA16274.1| exodeoxyribonuclease III [Roseobacter sp. SK209-2-6] Length = 268 Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 84/308 (27%), Gaps = 69/308 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +++ S+NIN + L Q+ D+V LQE+ Sbjct: 1 MKIASFNING----------------IKARAAALPQWLDEAQPDVVLLQEIKSVDEAFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++F + + + +A+ K + D +R Sbjct: 45 ELFEERGYNV------------ETHGQKSFNGVAILSKLPLEDIRRGLPGDDSDEQARW- 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLD---SLENTYSPSCSLLSQQAQWLKDWITQK 198 +E V + + + + ++L + ++ + + L Sbjct: 92 ----IEATV-VGKQALRICGLYLPNGNPVELEVDGSPVAGGKYAYKLAWMERLHKRAQDL 146 Query: 199 KESLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDS 243 P ++AGD+N + + ++ I F Sbjct: 147 LAEETPALMAGDYNIIPQAEDAKRPEAWREDALHRPESRAAYQQIVNLGFTEAFRARHQG 206 Query: 244 RCNANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + ID+F++ A L D ++ SDH Sbjct: 207 PGHYSFWDYQAGAWNRDDGIRIDHFLLSPQAADLLRDCQI-------DKEIRGREKPSDH 259 Query: 296 CPISIDYD 303 PI +D D Sbjct: 260 VPIWVDLD 267 >gi|90406919|ref|ZP_01215110.1| exodeoxyribonuclease III [Psychromonas sp. CNPT3] gi|90311961|gb|EAS40055.1| exodeoxyribonuclease III [Psychromonas sp. CNPT3] Length = 269 Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 78/309 (25%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ +N + Sbjct: 1 MKVISFNINGL----------------RARLHQLQAIIDKHQPDVIGLQEIKVHNDM--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K V Q + + Sbjct: 42 -------FPLEAVEKMGYHVYYHGQKAHYGVAMLCKKEPVSVQ-----YGFPTDDDEHQK 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + E + + + F T+ Q + L ++ + Sbjct: 90 RMIMVTFEDANGEKTTIL----NGYFPQGESQTHEIKYPYKRQFYKDLNTYLESHHCAED 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 +I GD N ++ + K + F Sbjct: 146 NVIIMGDINISPLDLDIGIGEINAKRWLKTKKCSFQPEERQWLKKLMDFGFTDTFRLLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + Q + D ++ S Sbjct: 206 EVSDQYSWFDYRSRGFDDNRGLRIDVILATQKIADNTLNSGI-------DYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI ++ Sbjct: 259 DHAPIWTEF 267 >gi|84500937|ref|ZP_00999172.1| exodeoxyribonuclease III [Oceanicola batsensis HTCC2597] gi|84391004|gb|EAQ03422.1| exodeoxyribonuclease III [Oceanicola batsensis HTCC2597] Length = 260 Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 39/302 (12%), Positives = 83/302 (27%), Gaps = 67/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NIN + + L + D+V LQE+ S + Sbjct: 1 MRIATFNING----------------IKARHAALTTWLDEAGPDVVLLQEIRSVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ +A+ K D +R Sbjct: 41 ------NFPREIFEDRGYNVETHGQKSFNGVAILSKLPLEDVTRGLPGDDADDHARW--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E V + V ++L + + Y + + L++ Q Sbjct: 92 --IEATVVGEHAALRVCGLYLPNGNPAPGPKYDYKLA------WMERLRERARQLIAQEE 143 Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++AGD+N L + D + + ++ + + + Sbjct: 144 PALMAGDYNIIPQPEDVARPDAWRDDALFRLDSRDAYRRVLNLGFTEAFRTRHPAPGHYS 203 Query: 248 NKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + N I ID+ +M + ++ SDH P+ + Sbjct: 204 FWDYQAGAWQRNNGIRIDHILMTPQCADLMQDAGIE-------KELRGREKPSDHVPVWV 256 Query: 301 DY 302 D Sbjct: 257 DL 258 >gi|88799872|ref|ZP_01115445.1| hypothetical protein MED297_03080 [Reinekea sp. MED297] gi|88777452|gb|EAR08654.1| hypothetical protein MED297_03080 [Reinekea sp. MED297] Length = 551 Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 93/320 (29%), Gaps = 53/320 (16%) Query: 21 AQKVRLVSWNINTLSEQEG------VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 A+ +RL N+N L G + ++ L Q LDAD++ L E+ Sbjct: 248 ARALRLAGSNVNNLFNGNGRGSGFRDGRGPENQRQYARKLNRLSQAFVRLDADVIALNEV 307 Query: 75 GSY------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + ++ + + + ++R I A+ + V Sbjct: 308 ENDGFGQNSTLIDLIESLNHLTGDDRYQAVTFSDRQTGTD------AIQNAMLFNARTVV 361 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCF----LDSLENT 176 + Q + + +R + E +G++ V+ HLKS Sbjct: 362 KVGQPRSITELP-EWENRWHRPFMLQEFEAIRSGQRFSVVVAHLKSKGSRCPEDTDQSVQ 420 Query: 177 YSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 +C L W++ P + GDFN N Sbjct: 421 QEGACMVKRLNAVDRLLGWLS--IPEDQPAFLIGDFNAYANERPIRKL--------ARAG 470 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS-----------EILYNEDD 284 + + +DY + + A + ++Q + ++ + Sbjct: 471 WKTLVGTANAYSYVYDGQPGVLDYVIGNAMAERLVLQSGYWPINSGQVAGATQVPFLSRL 530 Query: 285 IKSRGKRLSDHCPISIDYDF 304 SDH P+ ID F Sbjct: 531 RLPEFYGFSDHDPVFIDVSF 550 >gi|261880757|ref|ZP_06007184.1| exodeoxyribonuclease III [Prevotella bergensis DSM 17361] gi|270332533|gb|EFA43319.1| exodeoxyribonuclease III [Prevotella bergensis DSM 17361] Length = 267 Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 86/303 (28%), Gaps = 60/303 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VSWN+N L + Y LDAD LQE A Sbjct: 1 MKFVSWNVNGLRA----CVKPKVDAEGNVISKGFEAYFNELDADFFCLQETK-MQAGQLD 55 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 N + +++ + ++ A+ K+ + + D+ R Sbjct: 56 LQFNGYRSYWN----------YAERKGYSGTAIYTKHEPMNVACGMGIEEHDNEGR---- 101 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++++++ + E + + + +I + Sbjct: 102 -----VITLEYPEFYLVNVYTPNSQESLPGEVKPKR-LGYRMKWEEDFRAYIKR-LNETK 154 Query: 204 PFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCNA-------NK 249 P ++ GD N + + + + I Sbjct: 155 PVIVCGDLNVAHQEIDIKNAKTNRNNAGFTDEEREKMTILLDNGFIDTFRTMYPEQVIYS 214 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF++ + ++ +Y SDHCP+ + Sbjct: 215 WWSYRFRARERNTGWRIDYFLVSERLRNQIVDARIHTEIY-----------GSDHCPVEL 263 Query: 301 DYD 303 + + Sbjct: 264 ELN 266 >gi|29828508|ref|NP_823142.1| exonuclease [Streptomyces avermitilis MA-4680] gi|29605612|dbj|BAC69677.1| putative exonuclease [Streptomyces avermitilis MA-4680] Length = 262 Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 79/304 (25%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N T+ L + ++ D++ +QE + Sbjct: 1 MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCIQETKTTAE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + +AV + L G R Sbjct: 41 ------QFPADALRELGYESAVHATGRWNGVAVISRVGLEDVVRG-LPGDPGFDGVQEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + ++ Y Q + LK + Sbjct: 94 A-----LSATCGPVRVWSVYVPNGREVEHPHYAYK------LQWFEALKAAVAGDAAGSR 142 Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF + GDFN D T+ P+ + Sbjct: 143 PFAVMGDFNVAPTDDDVYDVAAFEGLTHVTPAERAALATLREAGLSDVVPRPLKYE-HPY 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID ++ K + D + +GK SDH P+ Sbjct: 202 TYWDYRQLCFPKNRGMRIDLVYGNEPFAKAVKDAYV-------DREERKGKGASDHAPVV 254 Query: 300 IDYD 303 +D D Sbjct: 255 VDLD 258 >gi|269122882|ref|YP_003305459.1| Endonuclease/exonuclease/phosphatase [Streptobacillus moniliformis DSM 12112] gi|268314208|gb|ACZ00582.1| Endonuclease/exonuclease/phosphatase [Streptobacillus moniliformis DSM 12112] Length = 598 Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 92/323 (28%), Gaps = 62/323 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 + +VS+NI S + + +R + + + DI+ L E+ Sbjct: 291 LNVVSYNIENFSHVD-------TPERVDELANQVATILQ--NPDILGLIEVGDDDGQKES 341 Query: 75 ------GSYNAVAKVFPKNTW--CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL-- 124 + A+ K + T F S + + I I R + V+ Sbjct: 342 EIVSSNENMEALVKAIKEKTGIDYGFVSVDPMDGKDGGWPAMHIRNVILYRIDKLNVVGF 401 Query: 125 -------------------QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 P R+ + E NGK I+V+ HLK Sbjct: 402 NQGDAITDTEVIKDGDNVRLTYNPGRIGNQDKIWEEVRKPLVAQFEYNGKNIFVIANHLK 461 Query: 166 SFCFLDSLENTY----SPSCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLG 219 S D + S + + +++ +++ ++ GD N Sbjct: 462 SKRSDDKVYGVNHPVIRKSEDVRIPEGKYINNFVKDILSKDDKATVIVLGDMNDFEFSKT 521 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 + I+ ++ + + +D ++++ + + Sbjct: 522 TKN-----INGDELVDVISLLPKNERYTYVYQGASQTLDNIMINKKYKDNVNIDVIRV-- 574 Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302 + SDH PI I + Sbjct: 575 --NSEFLKEQGSFSDHDPIFIQF 595 >gi|238020559|ref|ZP_04600985.1| hypothetical protein GCWU000324_00445 [Kingella oralis ATCC 51147] gi|237867539|gb|EEP68545.1| hypothetical protein GCWU000324_00445 [Kingella oralis ATCC 51147] Length = 240 Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 80/288 (27%), Gaps = 58/288 (20%) Query: 24 VRLVSWNIN-------TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R++S+NI LS + + ++ D D+V LQE+ Sbjct: 2 MRILSYNIQAAIASTSYLSYALRLHRQVLPSPAKRQVLADIARFIS--DFDVVCLQEIDF 59 Query: 77 YNAVAKVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + R + K+ + PL Sbjct: 60 GGLRNGFLSQAQQLLAQTPFSHSVWQVNRVVGKLSRHGNLILSKSPMREVVNEPLPS--- 116 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + R + VE ++ V ++HL Q + ++ ++ Sbjct: 117 ---KIKGRGMLAAEVETARGRLVVANVHLSLGAVD----------------QFRQIR-FV 156 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 QK + + GDFN + + + DS + + K Sbjct: 157 RQKLAAFENVCLMGDFNCPPD--------AEQLCLLTDHDYARLTLDSPTYPS--WKPKQ 206 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D+ + + F SDH P+ ++ D Sbjct: 207 SLDHIFVKGSLKGACHVSQF---------------AASDHLPVVLEVD 239 >gi|119513165|ref|ZP_01632214.1| Exodeoxyribonuclease III xth [Nodularia spumigena CCY9414] gi|119462186|gb|EAW43174.1| Exodeoxyribonuclease III xth [Nodularia spumigena CCY9414] Length = 260 Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 32/305 (10%), Positives = 80/305 (26%), Gaps = 71/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N + + + D++ LQE +A Sbjct: 1 MKIATWNVN----------------SIRTRLEQVIFWLSENPIDVLCLQETKVVDA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS--YPLLGAKDSFSRAG 141 S + + S + +A+ + P+L D Sbjct: 41 ------DFPRSPFEELGYHVYFSGQKAYNGVALISRQPLTDVSPGFTPILPNIDPLWDEQ 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R ++ I ++++++ + + S + + L++++ S Sbjct: 95 KRVITGVI-----DGIRIVNLYVPNGSAVGSEKY------EFKLRWLTVLREYLQTLLLS 143 Query: 202 LVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + GDFN + + + F K + Sbjct: 144 QPGICMCGDFNIALAAEDIHENANPDNHIMSSEPERQGLRDVLELGFADAFRKFTTEGGH 203 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ + Y+ + SDH P Sbjct: 204 -YSWWDYRAAGFRRNRGWRIDHHYLTPTLYESAKSCIIDITPRKLP-------QPSDHTP 255 Query: 298 ISIDY 302 + +++ Sbjct: 256 VIVEF 260 >gi|114766201|ref|ZP_01445201.1| Exodeoxyribonuclease III [Pelagibaca bermudensis HTCC2601] gi|114541572|gb|EAU44615.1| Exodeoxyribonuclease III [Roseovarius sp. HTCC2601] Length = 260 Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 44/302 (14%), Positives = 85/302 (28%), Gaps = 67/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + L + D+ LQE+ S V + Sbjct: 1 MKIATFNING----------------IKARIGALTDWLDEAQPDVALLQEIKS---VDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + +A+ K +D +R Sbjct: 42 FPREHF-------EERGWQVETHGQKSFNGVAILSKLPLEDVTRGLPGDDEDEQARW--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E V + + ++L + + + Y + + L+ + S + Sbjct: 92 --IEATVIGESHAVRLCGLYLPNGNPVPGPKYDYKLA------WMKRLEARARELLASEM 143 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGD+N YL ++ I F + + Sbjct: 144 PAVMAGDYNVIPQAEDAAKPQAWIEDALYLPETRAAFRRILNLGFTEAFRARTQGPGHYS 203 Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 N I ID+ ++ A + D + SDH P+ I Sbjct: 204 FWDYQAGAWQRNNGIRIDHLLLTPQAADLMTDVQI-------DRDIRGRDKPSDHVPVWI 256 Query: 301 DY 302 D Sbjct: 257 DL 258 >gi|91793693|ref|YP_563344.1| endonuclease/exonuclease/phosphatase [Shewanella denitrificans OS217] gi|91715695|gb|ABE55621.1| Endonuclease/exonuclease/phosphatase [Shewanella denitrificans OS217] Length = 475 Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 36/296 (12%), Positives = 83/296 (28%), Gaps = 34/296 (11%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + + ++++NI L LL Q + D++ LQ Sbjct: 194 ALATDPIANNSLTVMTYNIWAL---------PVIASHINERLALLPQKMRGH--DVLMLQ 242 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ + A + + + + + + + V Q + Sbjct: 243 EVFAPGRGAFLRALAQEYPYQTRMLDKSGVNIYDG-----GVMIVSRYPIVAQAQFVYPD 297 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + A + V G+ V H SF + N +Q + ++ Sbjct: 298 CSGTDCFAD-KGINYAQVIKQGEAYHVFATHTASFDTDVARSN--------RQKQFKQMR 348 Query: 193 DWITQ-KKESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSL-------IRFPKEKDS 243 ++ + + GDFN + + + + P+ + Sbjct: 349 EFAHSLAIPADETVIYGGDFNVNKRKFEDDYQQMFANLKAKQPSYSGYIESTFDPRINEF 408 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N +DY V+ + ++ ++ + + LSDH P+ Sbjct: 409 AGTPLSGGENVEYLDYIVISDEYAQTQSNDNDVKVPRSSAASLWQKWNLSDHFPVV 464 >gi|190150302|ref|YP_001968827.1| exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|189915433|gb|ACE61685.1| exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 7 str. AP76] Length = 275 Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 81/311 (26%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + D++ LQE + + Sbjct: 9 MKFISFNINGL----------------RARPHQLEAIIEKHQPDVLGLQEIKVADEDFPW 52 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +F+ H +A+ K + + D+ R Sbjct: 53 DLVNHLGYHVFHH------------GQKGHYGVALLTKKEPLAVRKGFPTDNADAQKR-- 98 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +E + VL+ F ++ + L+ ++ + Sbjct: 99 ---MIMADIETEFGVLTVLN-----GYFPQGENRSHETKFPAKEKFYADLQHYLESELSP 150 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 P VI GD N L ++ + + F Sbjct: 151 ENPIVIMGDMNISPTDLDIGIGEPNRKRWLRDGKCSFLPEEREWLDRLYSYGLIDTFRAM 210 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + + + ++ D ++ Sbjct: 211 NPQANDKFSWFDYRSKGFDDNRGLRIDLVLASKGLAERCVETGI-------DLEIRAMEK 263 Query: 292 LSDHCPISIDY 302 SDH P+ + Sbjct: 264 PSDHSPVWAVF 274 >gi|163841804|ref|YP_001626209.1| exodeoxyribonuclease III [Renibacterium salmoninarum ATCC 33209] gi|162955280|gb|ABY24795.1| exodeoxyribonuclease III [Renibacterium salmoninarum ATCC 33209] Length = 267 Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 29/308 (9%), Positives = 72/308 (23%), Gaps = 69/308 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + + + + D D++ +QE + Sbjct: 1 MKIATWNVNSL----------------RARADRVEDWLRRTDIDVLAIQETKCKDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ K + Sbjct: 41 ------NFPWELFENNGYEVAHFGFSQWNGVAIASKVGLDDVERTFPGQPAFGKPGVEPE 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KES 201 + + + V +++ + LD Y + + L + K+ Sbjct: 95 QEGRA-IAATCGGVRVWSLYVPNGRALDDPHMPYK------LEWLRVLNEEAKGWLAKDP 147 Query: 202 LVPFVIAGDFNRKINYLG-----------------NNDDFWKTIDPNDSLIRFPKEKDSR 244 + GD+N ++ + Sbjct: 148 NAQIALVGDWNIAPQDDDVWDVKYFIDEGLTHFSAPERAAFQAFEAAGFTDVVRPSHPGP 207 Query: 245 CNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 K ID+ + ++ D + +GK SDH Sbjct: 208 -GVYTYWDYKQLRFPKKEGMRIDFIMASPALAARVV-------HTEIDREERKGKGASDH 259 Query: 296 CPISIDYD 303 P+ + Sbjct: 260 APVIAELS 267 >gi|94971952|ref|YP_593992.1| exodeoxyribonuclease III (xth) [Deinococcus geothermalis DSM 11300] gi|94554003|gb|ABF43918.1| exodeoxyribonuclease III (xth) [Deinococcus geothermalis DSM 11300] Length = 254 Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 33/302 (10%), Positives = 76/302 (25%), Gaps = 75/302 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WNIN+L+ L Q + D++ LQE + Sbjct: 1 MKLATWNINSLNV-------------------RLPQVLETHRPDVLALQETKVVDE---- 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + + ++ + + Q R Sbjct: 38 ------RFPLEPLEALGYAAAFAGQKTYNSVDLLARAPLEAVQ------MGIPGLEDEQR 85 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + V+ +++ + S + Y + W+ + + Sbjct: 86 RVLVATV----GGVRVVCLYVPNGQAPHSEKYHYKLA------WLDAAHAWLRDELAAHE 135 Query: 204 PFVIAGDFNRKINYLG---NNDDFWKTIDPND-----------SLIRFPKEKDSRCNANK 249 + GDFN + + + + A Sbjct: 136 RLAVLGDFNVAPEDRDVHNPKRWAGQVLVSGPEREAFRGLLDVGFQDAFRLFEEPPGALS 195 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ID+ ++ + D +R SDH P+ Sbjct: 196 WWNYGALAFPRNWGLRIDHVLVSPALAQVCQACWV-------DREPRAHERPSDHAPVVA 248 Query: 301 DY 302 ++ Sbjct: 249 EF 250 >gi|308187049|ref|YP_003931180.1| Exonuclease III [Pantoea vagans C9-1] gi|308057559|gb|ADO09731.1| Exonuclease III [Pantoea vagans C9-1] Length = 272 Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 81/311 (26%), Gaps = 73/311 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L+ + D++ LQE + Sbjct: 5 MKFVSFNINGL----------------RARPHQLQALVEQHQPDVIGLQE---TKVHDDM 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + H +A+ K V R Sbjct: 46 FP-------LEEVAKLGYHVFYHGQKGHYGVALLTKAQPVSVSR-----GFPDDDEESQR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + I V++ F + + + L+ +T + Sbjct: 94 RLIMAEIPSPIGDITVIN-----GYFPQGESRDHPTKFPAKEKFYRDLQRLLTDDLPADK 148 Query: 204 PFVIAGDFNRK---------------------INYLGNNDDFWKTIDPNDSLIRFPKEKD 242 P ++ GD N ++L ++ + + + + Sbjct: 149 PVLVMGDMNISSTDLDIGIGEESRKRWLRTGKCSFLPEEREWMDRLLGWGLVDTWREHNP 208 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + +N ++ D ++ S Sbjct: 209 EVADRFSWFDYRSKGFDDNRGLRIDLVLASKNLAAHCVESGI-------DYEIRGMEKPS 261 Query: 294 DHCPISIDYDF 304 DH PI + F Sbjct: 262 DHAPIWSTFRF 272 >gi|265766011|ref|ZP_06094052.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 2_1_16] gi|263253679|gb|EEZ25144.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 2_1_16] Length = 344 Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 41/326 (12%), Positives = 83/326 (25%), Gaps = 56/326 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67 R+V WN + SL + + +R + + + Sbjct: 24 PFRVVFWNTENFFDTRHDSLKNDMEFLPHSMRHWNHRRYKKKLDNVARTLTAIGEWNFPA 83 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 ++ L E+ + + + + + I A+ ++ ++L Sbjct: 84 LIGLCEVENDTVMRDL---TLYSPLKEAGYRYVMTHCSDLRGIDVALLYQRDRFKLLS-- 138 Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y L + R + + + + G + ++ HL S S Sbjct: 139 YSALSVGNFKGHRPTRDILHVSGLLLTGDTLDIMVAHLPSRSGGV------RQSEPYRLY 192 Query: 187 QAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKT------IDPNDSLIRFP 238 AQ LKD +I GDFN + Sbjct: 193 AAQKLKDAADSLINVRPSAKLIIMGDFNDYPTDKSVVQVLQALSPEVSTHHDRLYHLLAR 252 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI-------------------- 278 K KD + K +D+ ++ E Sbjct: 253 KAKDRNFGSYKYQGEWGLLDHLIVSGTLLDISGTLFTEEKKANVARLPFLLTKDEKYGGM 312 Query: 279 -LYNEDDIKSRGKRLSDHCPISIDYD 303 + + SDH P+ +D++ Sbjct: 313 QPFRTYVGMKYQEGYSDHLPVYVDFE 338 >gi|254427925|ref|ZP_05041632.1| endonuclease/exonuclease/phosphatase family [Alcanivorax sp. DG881] gi|196194094|gb|EDX89053.1| endonuclease/exonuclease/phosphatase family [Alcanivorax sp. DG881] Length = 310 Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 38/323 (11%), Positives = 102/323 (31%), Gaps = 35/323 (10%) Query: 2 IRKYVLALVFFLVPCTASVAQKV---R-----------LVSWNINTLSEQEGVSLWKNSV 47 +R ++L ++ + ++ R L + N+ L + S + V Sbjct: 1 MRLFILIVLTISPLLAPADCAQLAPARGVPAASDQTWALATLNLWRLRDDHKNSELDDPV 60 Query: 48 KRT--TSDYTLLRQYAKN--LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103 + + + ++ LQE+ + + ++ + + + + Sbjct: 61 SSVLLRARINAVAGFIVEDLNAPHVLALQEVENQAVLDRLADRLSQRGY---RYRSALRE 117 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 + + + AI R + G + R + + +E V+ Sbjct: 118 GNDPSGMDVAIMYRSPVNIGSVSTL-FSGQQFHGHALYARPPLVVALEAPLAANVVVVHW 176 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 + + + QA L +W+T + P ++AGDFN + G D Sbjct: 177 RSARNLKKAWVH------EKRQTQAALLANWVTMQ---TSPLIVAGDFNTTWDE-GRFSD 226 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + L + + + ++ +D+ + + + + S Sbjct: 227 SHERFEQSGLLNLWSFLPEKERYSFRHRCRPQALDHIWVSPGLKPSVSKVAVSRGNAGRY 286 Query: 284 DIKSRGKR---LSDHCPISIDYD 303 D + +SDH + + ++ Sbjct: 287 DSLYGSQGVAPISDHDALVVYFE 309 >gi|92113745|ref|YP_573673.1| exodeoxyribonuclease III [Chromohalobacter salexigens DSM 3043] gi|91796835|gb|ABE58974.1| Exodeoxyribonuclease III [Chromohalobacter salexigens DSM 3043] Length = 276 Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 36/313 (11%), Positives = 71/313 (22%), Gaps = 78/313 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +RLVS+NIN + L D++ LQE + Sbjct: 1 MRLVSFNING----------------IRARLHQLEALVDAHAPDVIGLQETKVQDSEFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + H +A+ + G D A Sbjct: 45 EAVEALGYHVAFH------------GQKGHYGVALLTRQAPEAV----YYGLPDDGEEAQ 88 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R L +G+ + V + F + L + ++ Sbjct: 89 RRLIGVRLACDDGEPLTVYN-----GYFPQGENVDHPTKFPNKRDFYARLTTLLQERHTP 143 Query: 202 LVPFVIAGDFNRKINYLGN---------------------NDDFWKTIDPNDSLIRFPKE 240 + GDFN + ++ + + Sbjct: 144 SERLAVMGDFNISPADIDIGIGEANRKRWLREGKTSFQPVEREWLARLVDWGLSDCYRLR 203 Query: 241 KDSRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + IDY ++ + + D Sbjct: 204 YPEVDDRFSWFDYRSRGFERDPKRGLRIDYIMVTPALCERVTDAGI-------DYELRGI 256 Query: 290 KRLSDHCPISIDY 302 +R SDH P+ Sbjct: 257 QRPSDHAPVWAQL 269 >gi|254719412|ref|ZP_05181223.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp. 83/13] gi|265984415|ref|ZP_06097150.1| endonuclease/exonuclease/phosphatase [Brucella sp. 83/13] gi|306839189|ref|ZP_07472006.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp. NF 2653] gi|264663007|gb|EEZ33268.1| endonuclease/exonuclease/phosphatase [Brucella sp. 83/13] gi|306405736|gb|EFM61998.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp. NF 2653] Length = 369 Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 44/366 (12%), Positives = 97/366 (26%), Gaps = 86/366 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKN----------------SVKRTTSDYTLLRQY------- 60 + ++N+ L + S ++N + R + Sbjct: 2 FTIATFNVENLVRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMT 61 Query: 61 ---AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 ADI+ LQE+ + A+ + + R + + I A+ +R Sbjct: 62 ALAIAETRADILCLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121 Query: 118 ------KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKI 157 + S+ L D R R + + + I G+ + Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGLYQPELAELGIEPHDRIFKRDCLNVDLRIGGEPL 181 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNR 213 + HLKS + + + S + +A+ ++ I +K + ++I GDFN Sbjct: 182 SLFVAHLKSMSGARNGLDGRTSSHPVRLAEARAVRRIIEEKFGIDRVAERRWLICGDFND 241 Query: 214 KINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP 256 + + ++ + Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301 Query: 257 ----IDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 +DY + + + + + SDHCP Sbjct: 302 HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHCP 361 Query: 298 ISIDYD 303 +S+ + Sbjct: 362 VSVTLN 367 >gi|295688634|ref|YP_003592327.1| endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] gi|295430537|gb|ADG09709.1| Endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] Length = 323 Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 94/315 (29%), Gaps = 38/315 (12%) Query: 11 FFLVPCTASVAQKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 + + + +WNI + S +S +R L+ + DI Sbjct: 22 VLAQIPPKTDGDNLLIGTWNIRAFGNLTKTWASQPGDSPRRDFHACVLIAEVLSRF--DI 79 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV----- 123 V +QE+ + + + + + + N A + V++ Sbjct: 80 VAIQEVKAN--LRALRHTLKRLGPDYGFVMTDVTYGQPGNGERLAYVFDTRRVKLSGLAC 137 Query: 124 -----LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 P ++F R R + + + + ++ +H+ Sbjct: 138 ELVVPEDIDTPFSSPANAFQRQFVRTPYAVGFQAGEQTVVLVTLHVIYG-------AASQ 190 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + L+ A+WL+ W Q+ + + GDFN + D W+ Sbjct: 191 DRVAELTGIAKWLRQWAEQEDDFGHNLIAMGDFNI----DRHGDPLWQAFTSTGLTPAPG 246 Query: 239 KEKDSRCNANK--NLRNKIPIDYFVM------DQNAYKFLIQE---SFSEILYNEDDIKS 287 K R ++ K D Q +F ++ + + Sbjct: 247 LLKVPRTLSSSLDTPDLKSFFDQIAWFETVRGRPYLSLKYRQAGGVNFQGVVLKDLNRTE 306 Query: 288 RGKRLSDHCPISIDY 302 R+SDH P+ +++ Sbjct: 307 LSWRISDHYPLWVEF 321 >gi|319954984|ref|YP_004166251.1| endonuclease i [Cellulophaga algicola DSM 14237] gi|319423644|gb|ADV50753.1| Endonuclease I [Cellulophaga algicola DSM 14237] Length = 1976 Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 85/309 (27%), Gaps = 39/309 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + +V+WNI ++ N + + K +DAD+ ++E+ Sbjct: 1386 KTFDVVAWNIEWFGDETNSPTVGNPLSDAIQK-DSVLTILKKMDADVYAVEEISDDVLFG 1444 Query: 82 KVF-PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ--------------- 125 ++ N + S +++ + V V+ Sbjct: 1445 QMVSEMNGYDYVLS--EAVSYPNDATGTQQKVGFIYNTATVSVVATKPLLASIHPYYNGG 1502 Query: 126 -----QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 YP ++ + V + G + L + S + Sbjct: 1503 DATALSDYPDADKTRFYASGRLPFLMTADVTLGGVTKQFDIVALHARANSSSGPQSRYD- 1561 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------LGNNDDFWKTIDPNDSL 234 + + LKD + + ++ GD+N + + F + + Sbjct: 1562 --MRKYDVEVLKDTLDAQFA-DSNLIVLGDYNDDVAFTVADEVSSTVSTFDAYVQDTVNY 1618 Query: 235 IRFPK-EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 K + + N ID+ + I S S D +S Sbjct: 1619 TILTKVLSEGDYRSYVFRENM--IDHITVSNELSASYIDGSVSVGYEFYDT--DYTTTVS 1674 Query: 294 DHCPISIDY 302 DH P+S + Sbjct: 1675 DHFPVSARF 1683 >gi|301121913|ref|XP_002908683.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262099445|gb|EEY57497.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 388 Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 71/304 (23%), Gaps = 45/304 (14%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 +S ++++++N+ +G++ W+ + I+ QE Sbjct: 103 TLSSSPLSLKIMTFNLRFAGTGDGLNSWRYRK-------DHVADIIDRYHPAIMGTQEGL 155 Query: 76 SYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + F ++ + A+ R + P Sbjct: 156 KAQLAELESLLNHPYERFGVEREENGEFEQIFYDA---AVLERLDDGNFWLSEEPDTPGT 212 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + A R + + + + + S QQ Sbjct: 213 QGWDAACVRMVTWGKFRLRATQQELFVFNTQLDHVGPKSREEGSKLLWARIQQI------ 266 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 PF + GDFN + + + P K + Sbjct: 267 -----SGDAPFFLMGDFNTYRHTSTYSYFTSQEGGPQLREAWPEAAKQIGDVSYTYHGWA 321 Query: 255 I--------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ID+ + +G+ SDH PI Sbjct: 322 GVKNDGEKTAVRAANHIDWIFYRPQM---------KVLATEVITEDRKGRYPSDHYPIQA 372 Query: 301 DYDF 304 + F Sbjct: 373 ELLF 376 >gi|288928392|ref|ZP_06422239.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 317 str. F0108] gi|288331226|gb|EFC69810.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 317 str. F0108] Length = 321 Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 83/313 (26%), Gaps = 46/313 (14%) Query: 24 VRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD------- 65 LV N L + SL + + R + Q Sbjct: 12 FTLVQLNCENLFDCRHDSLKNDQEFLPTAYRHWTPSRYWKKLNRIGQEIVACGGEGKQWR 71 Query: 66 -ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 D+V L E+ + + + + ++ + S + +A+ Sbjct: 72 LPDLVALCEVENDSVLHDLTRRSLLRTARYE-----YVMTHSPDLRGIDVALLYSPFTFA 126 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L K R + V G + V +H S ++ Y + + Sbjct: 127 LIKSYALRIKPPTGMRPTRDILYAEGVTFGGDTLHVFVLHAPSRAGGEANTRPYRMAVAN 186 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 A D I Q V+ GDFN + + + + Sbjct: 187 RLCTA---IDSIRQG-NPTANIVVTGDFNDYGDAPALRLLAANGLTD---VSANAIGING 239 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------------ 291 + +D+ + Q ++ + + + +D + G + Sbjct: 240 AKGTYRYQGEWGSLDHVFVSQKIHEKGVSCHIFDAPFLMEDEEKYGGKRPWRTYQGPKYL 299 Query: 292 --LSDHCPISIDY 302 SDH P+ + + Sbjct: 300 GGFSDHLPVVVTF 312 >gi|89889844|ref|ZP_01201355.1| endonuclease/exonuclease/phosphatase family protein [Flavobacteria bacterium BBFL7] gi|89518117|gb|EAS20773.1| endonuclease/exonuclease/phosphatase family protein [Flavobacteria bacterium BBFL7] Length = 376 Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 37/322 (11%), Positives = 79/322 (24%), Gaps = 53/322 (16%) Query: 25 RLVSWNINTLSEQEGVSLWKN------------SVKRTTSDYTLLRQYAKNLDAD----- 67 + +N+ L + E + T + + + + AD Sbjct: 54 TVAFYNLENLFDTEDDPTINDEASPMMEMAEGLREDVYQKKLTNMARVLRKIGADKSGTA 113 Query: 68 --IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 ++ + E+ + + + + + R I A+ +K +V+ Sbjct: 114 PALIGVCEVENRKVLEDLASHELLRDYDYGIEHYDSPDR---RGIDVALLYKKSEFKVIN 170 Query: 126 QSYP--LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + S R R + + E+NG + V+ H S + + + Sbjct: 171 SQSRRLDISDPGSGRRIFTRDQLVVTGELNGDPMSVIVNHWPSRSGGEMRSRAKRVAAAA 230 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS-----LIRFP 238 L+QQ + + GD N D D + Sbjct: 231 LNQQIIDSLHVTNAMAK----IMTMGDLNDDPTNESVLKTLNAQQDQEDVKPQMIYNPYI 286 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL--------------------IQESFSEI 278 + N D ++ K + Sbjct: 287 QMLKDGFNTLSYRDAGNIFDQIMLTYPLLKKADQEGYFYYHAGIYNPSFMTNKSGRYKGY 346 Query: 279 LYNEDDIKSRGKRLSDHCPISI 300 + S SDH P+ + Sbjct: 347 PLRSYNNGSFTNGFSDHFPVYV 368 >gi|167647089|ref|YP_001684752.1| exodeoxyribonuclease III Xth [Caulobacter sp. K31] gi|167349519|gb|ABZ72254.1| exodeoxyribonuclease III Xth [Caulobacter sp. K31] Length = 262 Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 84/302 (27%), Gaps = 65/302 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + ++ ++ D+ LQE+ + Sbjct: 1 MRIATWNVN----------------SVNARLERVLEWFESAAPDVAVLQEIKCIDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + +A+ K + L D +R Sbjct: 41 ------KFPTEAFERLGYNVAVHGQKTYNGVAMLSKFPLEDVRRG-LPFLHDDEVDEQSR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E ++ ++ I+L + +D+ + Y + + L Sbjct: 94 Y-IEAVIGAP-TPFRMVGIYLPNGNPVDTEKFDYKLA------WMRRLHAHAQGLLALEE 145 Query: 204 PFVIAGDFNRKIN-------YLGNNDDFWKTIDPNDS-------LIRFPKEKDSRCNANK 249 P VIAGD+N ND ++ L + D Sbjct: 146 PLVIAGDYNVIPEVEDVANPEAWVNDALFRLESRGAFRALKNLGLTDAYMQADGAPGGYT 205 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A L + ++ SDH P+ Sbjct: 206 FWDYQAGAWPRNLGIRIDHLLLSPQAADKLAGVVIH-------RDERDKEKPSDHVPVVA 258 Query: 301 DY 302 + Sbjct: 259 EL 260 >gi|288920812|ref|ZP_06415110.1| exodeoxyribonuclease III Xth [Frankia sp. EUN1f] gi|288347771|gb|EFC82050.1| exodeoxyribonuclease III Xth [Frankia sp. EUN1f] Length = 296 Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 74/303 (24%), Gaps = 67/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WNIN + + L ++ D+V LQE K+ Sbjct: 1 MRIATWNIN----------------SAKARQSRLIEWLDRASPDVVCLQE-------TKL 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 +F + + +A+ + Q L F + R Sbjct: 38 ADDAFLELFDEDLFRRGYRVAHHGDGRWNGVAILSRAGLDDVQRG--LPGDPGFPKPEPR 95 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 I V +++ + +D Y + L+D + + + Sbjct: 96 AIAATC-----GGIRVWSLYVPNGRTVDDPHYAYKLA------WLAALRDVVGELAPAG- 143 Query: 204 PFVIAGDFNRKINYLGN---------------NDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GDFN + + Sbjct: 144 PVMTLGDFNIAPTDADVWDIAAFEGATHVTEAERAALGELHGAGLVDLMRARWPEETVYT 203 Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID + + D +G SDH P+ + Sbjct: 204 YWDYRQLCFPKNYGMRIDLALATADVAGRTRAVWV-------DRAARKGTGTSDHAPVVV 256 Query: 301 DYD 303 D D Sbjct: 257 DLD 259 >gi|152996388|ref|YP_001341223.1| exodeoxyribonuclease III [Marinomonas sp. MWYL1] gi|150837312|gb|ABR71288.1| exodeoxyribonuclease III [Marinomonas sp. MWYL1] Length = 289 Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 36/312 (11%), Positives = 82/312 (26%), Gaps = 76/312 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + + + L D++ LQE+ ++ Sbjct: 19 MKFVSFNINGL----------------RARPHQIEALVEKLAPDVIGLQEIKVHDDA--- 59 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + I + H +A+ K Q++ + R Sbjct: 60 -------FPHEIPESIGYHAYYYGQKSHYGVAIFSK-----QEATKIEYGFPGDEEDAQR 107 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + VL+ F + + L +++ Sbjct: 108 RMIIATFDTPQGPVKVLN-----GYFPQGESRDHEIKFPAKRKFYADLMEYLAAH-SPDE 161 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N L +++ T+ + + Sbjct: 162 KIIVMGDINISPTDLDIGIGEPNAKRWLKTGKCSFLPEEREWFATLANWGLTDTYRQLNP 221 Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 ++ + + ID + +L + D ++ Sbjct: 222 TKNDRFSWFDYRSKGFEDTPKRGLRIDVIMASNGLMPYLENS-------DVDYDLRALEK 274 Query: 292 LSDHCPISIDYD 303 SDH PI ++ Sbjct: 275 PSDHAPIWTSFN 286 >gi|116669243|ref|YP_830176.1| 5'-nucleotidase domain-containing protein [Arthrobacter sp. FB24] gi|116609352|gb|ABK02076.1| 5'-Nucleotidase domain protein [Arthrobacter sp. FB24] Length = 1525 Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 53/346 (15%), Positives = 103/346 (29%), Gaps = 64/346 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGV----------------SLWKNSVKRTTSDYT---- 55 A+V +++ S+N+ G ++ R ++ Sbjct: 505 APAAVGGTLKIASFNVLNYFPTTGDMLAGCTFYTDRDGNPITVRGGCDARGAANAENLKR 564 Query: 56 ---LLRQYAKNLDADIVFLQEMGS--------YNAVAKV---FPKNTWCIFYSTERLINH 101 + AD+V L E+ + +A+AK+ T I+ N Sbjct: 565 QQDKIVAAIGKSGADVVSLMEVENSAQFGKDRDDALAKLVEALNIPTPGIWDYVRTPANA 624 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI----NGKKI 157 + I TA +K + +S D+ + A R+ + + + + KK Sbjct: 625 PPLADEDMIRTAFIYKKAAAEPVGESVI---HNDTVAFASARKPLAQVFKPVGASDDKKF 681 Query: 158 WVLDIHLKSFCFLDSLENTYS---PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFN 212 + H KS + E+T S ++QA+ L + Q + + GDFN Sbjct: 682 IAIANHFKSKGSAATPEDTDKGQGASNLARTEQAKSLLAFSNDLQASKGTDKVFLMGDFN 741 Query: 213 RKINYLGNNDDFWK-TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N I+ ++ ++ +D+ + A + Sbjct: 742 AYAKEDPINVLTAAGYINQDEKARNADGSAK---HSYLFGGLVGSLDHVLATPGADSVVT 798 Query: 272 QESFSEILYNEDDIKSRGK--------------RLSDHCPISIDYD 303 I E + R SDH P+ + D Sbjct: 799 GADIWNINSVESVALEYSRYNSNVTNYYAPDQFRASDHDPVVVGLD 844 >gi|315606039|ref|ZP_07881070.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 180 str. F0310] gi|315312321|gb|EFU60407.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 180 str. F0310] Length = 275 Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 74/269 (27%), Gaps = 43/269 (15%) Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 + D D++ +QE+ + +++ W + R+ + +AVR+ Sbjct: 24 WLHASDTDVLLVQEVRAPEEISREIMGEEWDSVWVPCRIKGRAG--------VGVAVRRG 75 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 R+ + +L +S +G + E G + V+ + S ++ Sbjct: 76 RARIDGEPRLVLDDAESDVDSGRWLEATVSREGGGVPVRVVSAYFHSGEKDTPKQDAKMA 135 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD---------------- 223 + + L I ++ V ++ GDFN + + Sbjct: 136 HLPRIGNRMAEL---IAEEANGGVSSLVCGDFNVVRSRCDIKNWTPNHNKRAGVLDEEIA 192 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQES 274 F + IDY Sbjct: 193 FLNRWVDEGWRDTVRDLAGDTQGPYSWWSWRGQAFVNNAGWRIDYQYATPRLGALARS-- 250 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ R SDH P+S+ YD Sbjct: 251 -----FDIGRAPDYDARFSDHAPVSVTYD 274 >gi|294632194|ref|ZP_06710754.1| exodeoxyribonuclease III [Streptomyces sp. e14] gi|292835527|gb|EFF93876.1| exodeoxyribonuclease III [Streptomyces sp. e14] Length = 261 Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 77/304 (25%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N T+ L + ++ D++ LQE Sbjct: 3 MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCLQEAKVAED---- 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + +AV + L G R Sbjct: 43 ------QFPAEQLRELGYESAVHATGRWNGVAVLSRVGLADVVKG-LPGDPGYDGVQEPR 95 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + V +++ + +D Y + + LK + Sbjct: 96 A-----VSATCGPVRVWSVYVPNGREVDHPHYAYK------LEWFEALKAAVAGDAAGSR 144 Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF + GD+N D ++ P+ + Sbjct: 145 PFAVLGDYNVAPTDDDVYDRAAFEGATHVTPAERAALASLREAGLADVVPRPLKYE-HPF 203 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID ++ K D + +GK SDH P+ Sbjct: 204 TYWDYRQLCFPKNRGMRIDLVYGNEPFAKA-------VTDAYVDREERKGKGASDHAPVV 256 Query: 300 IDYD 303 +D D Sbjct: 257 VDLD 260 >gi|172061100|ref|YP_001808752.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MC40-6] gi|171993617|gb|ACB64536.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MC40-6] Length = 271 Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 31/300 (10%), Positives = 81/300 (27%), Gaps = 68/300 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + + D++ LQE Sbjct: 14 MKIATWNVNSLN----------------VRKQHVLDWIAHSGTDVLCLQE---------- 47 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + I + + + +A+ ++ + +S + Sbjct: 48 LKLPDEKYPRADLEAIGYRSWFTGQRTYNGVAILARDTLAVDESDIVRNIPGFDDPQQRV 107 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 AV + + ++ + + DS + Y Q L W++ + + Sbjct: 108 IAVTVE------GVRIVSAYFPNGQSPDSDKFVYK------MQWLDALHAWLSAEMQRYP 155 Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249 + GD+N +D + P + + + Sbjct: 156 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAKLLELGFVDAFRRFEQPEKTFT 215 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ D + ++ SDH P+ Sbjct: 216 WWDYRMLAFRRNAGLRIDHILLSPALAANCTSCEV-------DRLPRTWEQPSDHTPVVA 268 >gi|84686218|ref|ZP_01014113.1| possible Endonuclease/Exonuclease/phosphatase fa [Maritimibacter alkaliphilus HTCC2654] gi|84665745|gb|EAQ12220.1| possible Endonuclease/Exonuclease/phosphatase fa [Rhodobacterales bacterium HTCC2654] Length = 343 Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 47/341 (13%), Positives = 90/341 (26%), Gaps = 61/341 (17%) Query: 24 VRLVSWNINTLSE--QEGVSLWKNSVKRTTSD------YTLLRQYAKNLDADIVFLQEMG 75 VR+ ++N+ + + ++S D T L +DAD V + E Sbjct: 2 VRIATYNVEWFDGLFDDAGGMLEDSGWSGRHDVTRADQLTALGIVFTAMDADAVMIIEAP 61 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNVRVLQQ-------- 126 N R + A+ Sbjct: 62 DDNRTRSTVRALETFAHAYGLRARKALLGFRNATQQEIALLYNPDVFEARHDPQGDETGK 121 Query: 127 ---------------SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF-- 169 + D + V L NG+ + ++ +H KS Sbjct: 122 KGTRDAPRFDGVFRFDLDIDATPDLIRWSKPPLEVALTNRENGRVLRLIGVHAKSKAPHG 181 Query: 170 ---LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 D + + Q WL+ + ++ ++ GDFN F + Sbjct: 182 ASAPDEVMRLAIENRRKQMAQCIWLRQRVNDHLDAGDSLIVMGDFNDGPGLDEYEKLFGR 241 Query: 227 -----TIDPNDSLIRFPKEKD-------------SRCNANKNLRNKIP-IDYFVMDQNAY 267 + + +R + R +DY ++ + Sbjct: 242 SGIEIVLGEAGQTELYDPHARLAVSRRVGAMPVTARFWIHSEKRYLQALLDYIMVSPDLL 301 Query: 268 ----KFLIQESFSE-ILYNEDDIKSRGKRLSDHCPISIDYD 303 + I F + + Y +++ SDH P+SID D Sbjct: 302 ASKPDWRIWHPFDDPVCYRTIELREALLTASDHFPVSIDID 342 >gi|330466241|ref|YP_004403984.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris AB-18-032] gi|328809212|gb|AEB43384.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris AB-18-032] Length = 650 Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 45/293 (15%), Positives = 94/293 (32%), Gaps = 56/293 (19%) Query: 11 FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + ++RLV++NI +G D L + AD+V Sbjct: 405 WLTATNRPGPPTQIRLVAYNIRMGFGLDG-----------RLDLAALDRAIGR--ADVVL 451 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 L E+ + +T + + + + A+ R + ++ P Sbjct: 452 LSEVDRGWLLNG--GHDTLHLLATRLEMPYVFAPAAGALWGDAVLSRWPVRQAQTRALPA 509 Query: 131 LGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 +GA A+ + V+ +G ++ V+ HL+ D QA+ Sbjct: 510 VGAPTGAQ------ALGVTVDFSDGVRLAVVSTHLQPPPGTDP------------VVQAR 551 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + ++ T+ + P V+AGDFN + D + + + F + + Sbjct: 552 AVAEFATEYAD-GRPLVVAGDFNTEPG-----DPAFTALTDAGLVDAFAAVRPLPTSPA- 604 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ + + D + SDH P+++ Sbjct: 605 -DDPRTQIDHIFVSPDL--------------PTTDPVAIASTASDHLPVAVTL 642 >gi|332968196|gb|EGK07274.1| endonuclease/exonuclease/phosphatase [Psychrobacter sp. 1501(2011)] Length = 251 Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 40/289 (13%), Positives = 83/289 (28%), Gaps = 50/289 (17%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + + + ++NI+ S + K ++ DI+ LQE+ N + Sbjct: 4 SNSITVTTYNIH----------KGMSPLNRHVVTQRMGLALKQINPDIMCLQEVQGQN-L 52 Query: 81 AKVFPKNTWCIFYSTERLI-------NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 ++ N + E ++ K + H AV ++ P Sbjct: 53 KRMLKYNEYPNQSQHEWFGEFLDCQHSYGKNSEYGNGHHGNAVLSRHPL-----DPKHNV 107 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + ++ R + V G + V+ + + +Q + + Sbjct: 108 NITVNKLEQRGVLHCEVLPLGWEEPVVVLCAHLNLLEND-----------REKQYRAIAA 156 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 ++ + P ++AGDFN K D + F + Sbjct: 157 YVNDTIDQNRPLILAGDFNDWKKVS-----CQKLADELNMTEAFMEMHHKLLPTYPAKLP 211 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + L + LSDH PIS + Sbjct: 212 VLSLDRIYVRN-----LKIKRAWVH------KGKPWSSLSDHLPISAEL 249 >gi|170733499|ref|YP_001765446.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia MC0-3] gi|169816741|gb|ACA91324.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia MC0-3] Length = 258 Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 32/300 (10%), Positives = 80/300 (26%), Gaps = 68/300 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + D++ LQE Sbjct: 1 MKIATWNVNSLN----------------VRKQHVLDWLAQSGTDVLCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ ++ V+ +S + F R Sbjct: 35 LKLPDEKFPRADLEAAGYRSWFTGQKTYNGVAILVRDTLVVDESDVVRNIP-GFDDPQQR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++ + + LDS + Y Q L+ W+ + + Sbjct: 94 VIAATV-----DGVRIVSAYFPNGQALDSDKFVYK------MQWLDALQAWLRTELQRYP 142 Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249 + GD+N +D + P + + + Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLIELGFVDAFRRFEQPEKTFT 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ D ++ SDH P+ Sbjct: 203 WWDYRMMAFRRNAGLRIDHILLSPALAATCASCEV-------DRTPRTWEQPSDHTPVVA 255 >gi|331006597|ref|ZP_08329884.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC1989] gi|330419581|gb|EGG93960.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC1989] Length = 272 Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 35/312 (11%), Positives = 81/312 (25%), Gaps = 74/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +S+N+N L + D D + LQE + Sbjct: 2 IKAISFNVN----------------SIRQRIPQLEALIEKHDPDFIGLQETKVTDV---- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K+ + Q ++ R Sbjct: 42 ------DFPVDVIEKMGYHVQFHGQKTHYGVALMSKHPFLSVQKGYDTDDDEAQK----R 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V G +I V++ F + + + + L ++ + Sbjct: 92 FISGRFVSPLGGEITVVN-----GYFPQGESQDHPTKFANKKKYYEDLDSYLCRNHTPED 146 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++L ++ + + Sbjct: 147 QLIVMGDMNISPEDQDIGIGEDNRKRWLKTGKCSFLPIEREWLAKLYNWGLTDTYRLLHP 206 Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + ID + ++ K + + D ++ Sbjct: 207 TGSDYFSWFDYRSRGFEREPKRGLRIDLILATESLAKTVTESGI-------DYEIRGMEK 259 Query: 292 LSDHCPISIDYD 303 SDHCPI +D Sbjct: 260 PSDHCPIWTYFD 271 >gi|89069305|ref|ZP_01156668.1| probable exonuclease [Oceanicola granulosus HTCC2516] gi|89045181|gb|EAR51249.1| probable exonuclease [Oceanicola granulosus HTCC2516] Length = 255 Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 34/302 (11%), Positives = 80/302 (26%), Gaps = 70/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN L + D++ LQE+ + +A Sbjct: 1 MKVATYNINN----------------VRKRLGNLLDWLAGAAPDVLCLQELKTADA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + + L D R Sbjct: 41 ------DLPRAALAEAGYQGVWRGQRAWNGVAILSRGGAPVLVRDSLPDDPD------PR 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +A L + G + + ++ + + Y + L + V Sbjct: 89 QARYLEAAVEG--VLIGCLYAPNGNPCPGPKYDYKRA------WTDRLVAHAADLLAAGV 140 Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGD+N D ++++ + Sbjct: 141 PAVLAGDYNIVPEPRDIYDTTSYDGSSLVQPEMRARYRSLLDAGWTDAVRALRPEGTAYT 200 Query: 249 KNLRNKIP--------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +D+ ++ A + L+ D + SDH P+ + Sbjct: 201 FWDYRRRRFERDGGLRLDHLLLSPPAAERLVAIGI-------DREARAREEASDHAPVWV 253 Query: 301 DY 302 + Sbjct: 254 EL 255 >gi|269796627|ref|YP_003316082.1| extracellular nuclease [Sanguibacter keddieii DSM 10542] gi|269098812|gb|ACZ23248.1| predicted extracellular nuclease [Sanguibacter keddieii DSM 10542] Length = 1591 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 102/362 (28%), Gaps = 80/362 (22%) Query: 13 LVPCTASVAQ-KVRLVSWNINTLSEQEGV------------------SLWKNSVKRTTSD 53 P TA++ V + ++N+ G + + R D Sbjct: 453 AAPDTAAIGDADVTVAAFNVLNYFTTTGSTVTGCSSYTDRTGAGITTNTCPGNGPRGAWD 512 Query: 54 YT-------LLRQYAKNLDADIVFLQEMGSYNAVAKV---------------FPKNTWCI 91 + LDAD+V L E+ + A+ + ++ W Sbjct: 513 ADNLERQQDKIVDAITRLDADVVGLMEIENSAALGEAPDEAVGTLVAALNAEAGEDRWAF 572 Query: 92 FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY---PLLGAKDSFSRAGNRRAVEL 148 S L + +D + AI + V + +S+ L GA +F A Sbjct: 573 VESPADLPAVADQDVISG---AIIYQTAAVTPVGESHALGTLSGAGQTFVNAREPIGQAF 629 Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESL-- 202 GK +V+ H KS + + + QA L W+ + Sbjct: 630 EPADGGKPFFVVANHFKSKSAGGASGAERDLGQGAWNAARTAQATALATWVDETALPAVS 689 Query: 203 -------VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 ++ GDFN + + + Sbjct: 690 AEAGVPVEDVLLLGDFNAYTHEDPLLHLY------GAGYQDATTLEGRGELTYSYQGLNG 743 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNE--------------DDIKSRGKRLSDHCPISID 301 +D+ +++++A + EI E D ++ R SDH P+ + Sbjct: 744 SLDHVLLNESAAERFTGSDVWEINAPESIALEYSRFNVTAGDFYRADAFRSSDHDPVVVG 803 Query: 302 YD 303 Sbjct: 804 LT 805 >gi|115463669|ref|NP_001055434.1| Os05g0389500 [Oryza sativa Japonica Group] gi|48926650|gb|AAT47439.1| 'unknown protein, contains endonuclease/exonuclease/phosphatase family, PF03372' [Oryza sativa Japonica Group] gi|113578985|dbj|BAF17348.1| Os05g0389500 [Oryza sativa Japonica Group] gi|215686379|dbj|BAG87640.1| unnamed protein product [Oryza sativa Japonica Group] gi|215704387|dbj|BAG93821.1| unnamed protein product [Oryza sativa Japonica Group] gi|215740790|dbj|BAG96946.1| unnamed protein product [Oryza sativa Japonica Group] gi|222631460|gb|EEE63592.1| hypothetical protein OsJ_18409 [Oryza sativa Japonica Group] Length = 389 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 39/326 (11%), Positives = 78/326 (23%), Gaps = 40/326 (12%) Query: 17 TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + + RLVS+NI + ++ + + + K+ +AD++ +QE+ Sbjct: 57 AGAAGYQFRLVSYNILAQVYVKSAFFPHSPSACLKWKTRSKAVLSELKSFEADLMCIQEL 116 Query: 75 GSYNAV-AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN------------- 120 Y+ K + + Y + V+K+ Sbjct: 117 DEYDTFYKKNMENSGYSSIYIQRSGDKRDGCGIFYKPKSMELVQKEVLHYNDLVEKYVHT 176 Query: 121 ------------VRVLQQSYPLLGAKDSFSRAGNR-----RAVELLVEINGKKIWVLDIH 163 + R + ++N +L + Sbjct: 177 DHVNSDTSNNSSPTEEASKKVDNNKHGDPNDPRFRLKRDCVGLLAAFKLNDPCDHILIMA 236 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 + + + + + I+ K +IAGDFN N Sbjct: 237 NTHIYWDPEWIDVKLAQAKYILSRVTQFEKLISNKFNCKPSVMIAGDFNSTPGDKVYNYL 296 Query: 224 FWKTIDPNDSLI-----RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ--ESFS 276 D D + N +DY + + Sbjct: 297 VSANSDSTDEAPIKLRSLYAANGGEPEFTNCTPGFTGTLDYIFLSDGSSVKPTSLLRIPR 356 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302 SDH PI D+ Sbjct: 357 GDSAEVQGGLPNFHHPSDHLPIGADF 382 >gi|84501585|ref|ZP_00999757.1| endonuclease/exonuclease/phosphatase family protein [Oceanicola batsensis HTCC2597] gi|84390206|gb|EAQ02765.1| endonuclease/exonuclease/phosphatase family protein [Oceanicola batsensis HTCC2597] Length = 336 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 46/335 (13%), Positives = 88/335 (26%), Gaps = 55/335 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT--------LLRQYAKNLDADIVFLQEMG 75 +RL S+NI R ++ + + +DAD V L E Sbjct: 1 MRLASYNIEWFDALFDDDGALLIDDRWSARRDVTRAEQARAIATVLRAVDADAVMLIEAP 60 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + R N + Sbjct: 61 DTSGRRSTVRALETFAASFDLRTRRAVIGFPNRTQQEIALLFDPETMAAHHDPGGRPDDA 120 Query: 136 SFSRAGNRRAVELLVE-------------------INGKKIWVLDIHLKSFCFLDSLENT 176 R R ++L V+ G + +L +HLKS + Sbjct: 121 EAPRFDGRFRIDLDVDASRDTVVFSKPPLELMVTLPGGAALRLLGVHLKSKAPHGARTRD 180 Query: 177 YS-----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW------ 225 + QA WL+ + + P ++ GD N + F Sbjct: 181 EIMRLAIANRRKQLAQAIWLRRRVAGHLAAGEPLIVMGDLNDGPGLDEYENLFGRSSVEI 240 Query: 226 -------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-----IDYFVMDQNAYK----F 269 + DP+ + + A +++ +DY ++ + + Sbjct: 241 VLGDEAPRLYDPHVDQALAARLTAAPTTARFHIQPDDRYLQALLDYIMISPDLMSHNPRW 300 Query: 270 LIQESFSEI-LYNEDDIKSRGKRLSDHCPISIDYD 303 I F + ++ ++ SDH P+ +D D Sbjct: 301 RIWHPFDDPGCWSRPQLRDALITASDHFPVVLDID 335 >gi|293376548|ref|ZP_06622776.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter sanguinis PC909] gi|325839350|ref|ZP_08166789.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter sp. HGF1] gi|292644774|gb|EFF62856.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter sanguinis PC909] gi|325490470|gb|EGC92786.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter sp. HGF1] Length = 260 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 88/287 (30%), Gaps = 44/287 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+ + S +G R ++ K + DI+ LQE+ + Sbjct: 1 MKVMTFNLRSDSIFDG-------KNRWHKRNHIVFDVIKKYNCDIIGLQEVTNKMYKDIE 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD-----SFS 138 + + I H I + K++ + ++++ L + Sbjct: 54 EQLSDYYIIGQPRCKR-------FFVEHNNILISKRHEILEEETFWLSNQPKKVGSSIWY 106 Query: 139 RAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R V ++ G+ + + + HL + S + QQ Sbjct: 107 SVFPRICTTAKVRLDSGELVRIYNTHLDVYLSPARGYGLKKISEYIERQQ---------- 156 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK----DSRCNANKNLRN 253 + +P V+ GDFN N+ + + +K K+ Sbjct: 157 -EIDQIPVVLMGDFNATPNHRIIKTFTEGELSHKRFVAVQEYDKSIYNKPTMGRFKDSEK 215 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +DY + + + G+ SDH P+ Sbjct: 216 GMHLDYIFVSEECA---------VLHAEIIKDNVNGQYPSDHYPLLA 253 >gi|302555181|ref|ZP_07307523.1| exodeoxyribonuclease III [Streptomyces viridochromogenes DSM 40736] gi|302472799|gb|EFL35892.1| exodeoxyribonuclease III [Streptomyces viridochromogenes DSM 40736] Length = 259 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 78/304 (25%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N T+ L + ++ D++ LQE + Sbjct: 1 MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCLQEA---KVAEEQ 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + +AV + L G R Sbjct: 42 FPSEQLREL-------GYESAVHATGRWNGVAVLSRVGIEDVVKG-LPGDPGFDGSVEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + +D Y Q + LK + Sbjct: 94 A-----ISATCGPLRVWSVYVPNGREVDHPHYAYK------LQWFEALKAAVAGDAAGSR 142 Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF + GD+N D ++ P+ + Sbjct: 143 PFAVMGDYNVAPTDDDVFDPAAFADSTHVTPAERAALASLREAGLSDVVPRPLKYE-HPF 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID ++ K D + +GK SDH P+ Sbjct: 202 TYWDYRQLCFPKNRGMRIDLVYANEPFTKA-------VEDAYVDREERKGKGASDHAPVV 254 Query: 300 IDYD 303 +D D Sbjct: 255 VDLD 258 >gi|237721042|ref|ZP_04551523.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|293372989|ref|ZP_06619358.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|229449877|gb|EEO55668.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|292632057|gb|EFF50666.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] Length = 365 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 88/299 (29%), Gaps = 68/299 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + ++N++ + + + Y +NL ADI+ QE + Sbjct: 110 LTVATYNVDAFNHEHTGYSC-----------KEIASYMRNLQADILCFQEF----GINDE 154 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F ++ S + +AV + + +K+ Sbjct: 155 FGIDSIYAALSNWPYH-YIPSSPEGKNLLQLAVFSRYPIKEEHLIIYPDSKNCS------ 207 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------PSC 181 + +EING+ I + + HL++ + + Sbjct: 208 --LACDIEINGRTIRLFNNHLQTTEVSQNKRKLEKGLRTDDSQRVEHAALGLIDGLHENF 265 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + QA LK I S P ++ GDFN + + TI + F + Sbjct: 266 RKRAVQADLLKQLI---AASPYPTLVCGDFNSLPSSYVYH-----TIKGDKLQDGFQRSG 317 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 K ++ + IDY + N D S SDH P+ + Sbjct: 318 HGYMYTFKYFKHLLRIDYILHSPEL--------------NSTDYFSPDLNYSDHNPVVM 362 >gi|117618538|ref|YP_855175.1| endonuclease/exonuclease/phosphatase family protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559945|gb|ABK36893.1| endonuclease/exonuclease/phosphatase family [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 371 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 89/300 (29%), Gaps = 42/300 (14%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + ++++ S+N+ L LL +Y K DA + LQE+ Sbjct: 100 PEADEARLKVASYNVWAL---------PVIAASIGERLALLPEYLKGYDA--LLLQEVFD 148 Query: 77 ---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + + + + + +D I R VR Q YP Sbjct: 149 GRREGFLQALAKEYPYQTRVLDKP------GVNIHDGGVVIVSRYPIVREAQLVYPQCTG 202 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 D F+ + V GK + H SF ++ + Q + L Sbjct: 203 TDCFADK---GVMYAEVIKGGKAWHLFATHTASFDTDEA-----RRLRQIQFGQIRTLAA 254 Query: 194 WITQKKESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + + + GDFN + + ++ ++ + ++ + N Sbjct: 255 SLK--IPASDTVIYGGDFNVNKRKFADDYAGMLANLNADEP--GYGGYTEATFDPRINPY 310 Query: 253 ---------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 N +DY V + + I + D LSDH P+ + Sbjct: 311 AGGPLSGGANVEYLDYLVASREYGAVCHNLNSVWIPRSSDGSLWPASNLSDHFPVKGEIS 370 >gi|94969020|ref|YP_591068.1| exodeoxyribonuclease III (xth) [Candidatus Koribacter versatilis Ellin345] gi|94551070|gb|ABF40994.1| exodeoxyribonuclease III (xth) [Candidatus Koribacter versatilis Ellin345] Length = 260 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 39/301 (12%), Positives = 88/301 (29%), Gaps = 74/301 (24%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + SWN+N + ++ + D++ +QE+ + A+ F Sbjct: 9 IASWNVN----------------SIRARLGIVSDWIAKNHPDVLLMQELKATEFPAEAFH 52 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + T+ + +AV + ++ DS +R Sbjct: 53 ALGYQAAAVTQ------------KAYNGVAVLSRLPVETVRTALRGDEADSHARY----- 95 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 +E + V++I+ + + + + +Y + L + + +P Sbjct: 96 ----LETRIDGLRVVNIYAPNGNPIGTEKFSYKLA------WLDRLIQEMQSWLKDDIPT 145 Query: 206 VIAGDFNRKIN-------YLGNNDDFW--------KTIDPNDSLIRFPKEKDSRCNANKN 250 V+AGD+N D + + + F Sbjct: 146 VVAGDYNIIPEDIDCHKPSSWIRDALFQPEPRERYRALLAMGYTDAFRTLHPGETGQFTF 205 Query: 251 LRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 I ID+F++ + L + D + ++ SDH PI ++ Sbjct: 206 WDYFRKAFETNRGIRIDHFLLSPSLKPRLAKCHI-------DTEPRKLEKPSDHTPIVLE 258 Query: 302 Y 302 Sbjct: 259 L 259 >gi|54027277|ref|YP_121519.1| putative exonuclease [Nocardia farcinica IFM 10152] gi|54018785|dbj|BAD60155.1| putative exonuclease [Nocardia farcinica IFM 10152] Length = 303 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 34/310 (10%), Positives = 75/310 (24%), Gaps = 68/310 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +RL +WN+N S + + D D++ +QE + Sbjct: 6 SLRLATWNVN----------------SIRSRLDRVTTWLDEHDIDVLAMQETKCRDD--- 46 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAG 141 + + + + +A+ + +P D + Sbjct: 47 -------QFPFERFAELGYEVAHLGVNQWNGVAIASRVGLADIAPAFPGQPGFDKDAADS 99 Query: 142 NRRAVELL---VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 A + + + V +++ + LD Y + L+ Sbjct: 100 LISAPVVESRALAATCGGVRVWSLYVPNGRALDDPHYAYK------LEWLAALRASAADW 153 Query: 199 --KESLVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEK 241 + + GD+N D + I Sbjct: 154 LAADPAAKIALVGDWNIAPTDDDVWSVEFFAGKTHTSQPERDAFAAILDTGFADVMRPFA 213 Query: 242 DSRCNANKNLRNK--------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID+ + ++ D +GK S Sbjct: 214 PGPGVYTYWDYTRLRFPRKEGMRIDFVLASPALAATVVDAGV-------DREARKGKGAS 266 Query: 294 DHCPISIDYD 303 DH P+ ++D Sbjct: 267 DHAPVIAEFD 276 >gi|88813684|ref|ZP_01128912.1| exodeoxyribonuclease III [Nitrococcus mobilis Nb-231] gi|88789071|gb|EAR20210.1| exodeoxyribonuclease III [Nitrococcus mobilis Nb-231] Length = 256 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L SWN+N+L + ++ K D++ LQE + Sbjct: 1 MKLASWNVNSL----------------KVRLPQVLEWLKTAQPDLLGLQETKVPDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + S + +AV + + + R Sbjct: 41 ------HFPSEALRAAGYEVVYSGQKTYNGVAVLSRWSITE------MLTELPTLADPQR 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + +++++ + + S + Y L+ W+ ++ E Sbjct: 89 RVLAVTA----AGLRFINLYVPNGQAVGSDKYAYKLD------WLAHLRGWLAEELERWP 138 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GDFN +D + + F + Sbjct: 139 RSIVVGDFNIAPQDQDVHDPQQWHEQVLCSTPEREALQALLALGFADSFRQFPQEP-GIF 197 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ++ ID + + L D R SDH P+ Sbjct: 198 SWWDYRMNSFRRNRGLRIDLILSSAALTRTLTASYV-------DRGPRGWPRPSDHAPVV 250 Query: 300 IDYDF 304 + F Sbjct: 251 AELHF 255 >gi|295691547|ref|YP_003595240.1| exodeoxyribonuclease III Xth [Caulobacter segnis ATCC 21756] gi|295433450|gb|ADG12622.1| exodeoxyribonuclease III Xth [Caulobacter segnis ATCC 21756] Length = 268 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 78/305 (25%), Gaps = 67/305 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N ++ D++ +QE+ Sbjct: 3 LRIATWNVN----------------SVRLRAEQAARFVDEHAPDVLCMQEIKCQ------ 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + E + + + +A+ + + Sbjct: 41 ---DGEFPREAFEAMGLPHLKIAGQKGWHGVAIASRLPIEDVPTLMNCREGH-------- 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + V++ G +I + D + +P + L + ++ + Sbjct: 90 -ARCVAVKVAGVEIQ----NFYIPAGGDLPDRAANPKFDHKLDFYETLTAALKKR-DPKD 143 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N + + F I D L Sbjct: 144 PLIVTGDLNIAPGENDVWSHRQMLKVVSHTPPELEAFDALIKSMDLLDLPRLATPEPDKL 203 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + I + ++ D +R SDH P Sbjct: 204 FSWWSYRAADFRKSNRGLRLDHILASPGLRDAAIVDG--QVASRVHDDVREWERPSDHAP 261 Query: 298 ISIDY 302 ++ D Sbjct: 262 VTADL 266 >gi|298374557|ref|ZP_06984515.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] gi|298268925|gb|EFI10580.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] Length = 365 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 95/334 (28%), Gaps = 78/334 (23%) Query: 4 KYVLALVFFLVPCTASV--------------AQKVRLVSWNINTLSEQEGVSLWKNSVKR 49 K++L +F + C V + ++++++N+ + + N Sbjct: 68 KFLLIGIFSFLLCWGPVKRYFPFHSHKDVPREEVLKVLTYNVMAFGYKNHTKIAPN---- 123 Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 + QY N DADIV LQE + + + + S + + S Sbjct: 124 ------KIIQYIANSDADIVCLQEYATAKSEKSLTASKIYDA-LSMYPYRSVFYQSSTKF 176 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 IAV K + + + V I GKK+ +++ HL+SF Sbjct: 177 QSFGIAVFSKYPLSNSRMVKYDSDYN--------GSSVHEVNIKGKKLTLINNHLESFKL 228 Query: 170 LDSLENTYS-----------------------PSCSLLSQQAQWLKDWITQKKESLVPFV 206 YS P+ + ++QA+ + + I + Sbjct: 229 TMEDRTRYSSLIKSFSSDGLDDLKGAFEQKLGPAFRIRAKQAEAVSEEIKN--AKGDYVL 286 Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 + GDFN + D F + ID + N Sbjct: 287 VCGDFNDTPISYAHRTI------QGDLTDAFAESGRGMGITYNQNFFWFRIDNILHSPNM 340 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + SDH P+ Sbjct: 341 TSM--------------NCSVDKVAYSDHYPLWC 360 >gi|302884128|ref|XP_003040961.1| hypothetical protein NECHADRAFT_54591 [Nectria haematococca mpVI 77-13-4] gi|256721855|gb|EEU35248.1| hypothetical protein NECHADRAFT_54591 [Nectria haematococca mpVI 77-13-4] Length = 303 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 37/284 (13%), Positives = 74/284 (26%), Gaps = 17/284 (5%) Query: 24 VRLVSWNINTLSEQEGVSLWKN-SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +RL+++NI E + R L +V +QE+ A+ Sbjct: 25 LRLMTYNIRYQVEPSRAEDGEELWPLRRPHMAAQLNYELAGRPDSLVCMQEVTYPQALDL 84 Query: 83 VFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + W + R S +I ++ P + Sbjct: 85 MDDFGEDWALIGGGRRDGAKKGELSPIFYRRSIWNLEQTKTYWLSRTPDKAGSKGWDAEL 144 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R V+ + S + L D + K Sbjct: 145 PRVVTVGRFRHLHTGARVVYMCTHFDW-------KGKKSQGHSAAMIIDLADRWSSHKRE 197 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN--LRNKIPIDY 259 +P +AGD N + N + D + + + + + + +D+ Sbjct: 198 SLPVFVAGDLNATPDSPAYNLLATQLYDLKYQVPSSKRFGHQKTYTGFSVDESDDMDLDH 257 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + Y G +SDH P+ +D + Sbjct: 258 MFVRDPMDISFKSFAVLNTRY------DDGIFISDHRPVVVDME 295 >gi|171318534|ref|ZP_02907685.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MEX-5] gi|171096276|gb|EDT41183.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MEX-5] Length = 271 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 31/300 (10%), Positives = 81/300 (27%), Gaps = 68/300 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + + D++ LQE Sbjct: 14 MKIATWNVNSLN----------------VRKQHVLDWIAHSGTDVLCLQE---------- 47 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + I + + + +A+ ++ + +S + Sbjct: 48 LKLPDEKYPRADLEAIGYRSWFTGQRTYNGVAILVRDTLAVDESDVVRNIPGFDDPQQRV 107 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 AV + + ++ + + DS + Y Q L W++ + + Sbjct: 108 VAVTVE------GVRIVSAYFPNGQSPDSDKFVYK------MQWLDALHAWLSAEMQRYP 155 Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249 + GD+N +D + P + + + Sbjct: 156 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAKLLELGFVDAFRRFEQPEKTFT 215 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ D + ++ SDH P+ Sbjct: 216 WWDYRMLAFRRNAGLRIDHILLSPALAANCTSCEV-------DRLPRTWEQPSDHTPVVA 268 >gi|302557371|ref|ZP_07309713.1| exodeoxyribonuclease III [Streptomyces griseoflavus Tu4000] gi|302474989|gb|EFL38082.1| exodeoxyribonuclease III [Streptomyces griseoflavus Tu4000] Length = 259 Score = 91.9 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 76/304 (25%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N T+ L + ++ D++ LQE Sbjct: 1 MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCLQEAKVAED---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + +AV + L G R Sbjct: 41 ------QFPAEQLRELGYESAVHATGRWNGVAVLSRVGLADVVKG-LPGDPGYDGSVEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + V +++ + ++ Y Q + L ++ Sbjct: 94 AIAATC-----GPVRVWSVYVPNGREVEHPHYAYK------LQWFEALTAAVSGDAAGGR 142 Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF + GD+N D ++ P+ + Sbjct: 143 PFAVLGDYNVAPTDDDVYDRSAFEGSTHVTPAERAALASLREAGLSDVVPRPLKYE-HPY 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID + K + D + +GK SDH P+ Sbjct: 202 TYWDYRQLCFPKNRGMRIDLVYGNAPFAKAVTDSYV-------DREERKGKGASDHAPVV 254 Query: 300 IDYD 303 +D D Sbjct: 255 VDLD 258 >gi|284034607|ref|YP_003384538.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283813900|gb|ADB35739.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 266 Score = 91.9 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 34/296 (11%), Positives = 77/296 (26%), Gaps = 53/296 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNAV 80 +R+++WN+ + + DAD++ LQE+ + N Sbjct: 1 MRVLTWNVWWRFGP------------WQRRADAILTVLREADADLIGLQEVWAQGNDNQA 48 Query: 81 AKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 A++ + + +R + + A+ + + L G Sbjct: 49 AQLASELGLHWTFEPLANPEPWQRRLGDRSVAIGNAILSRRPIDDRAVLELPGP------ 102 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R A+ G + + + ++ +Q + L ++ + Sbjct: 103 -EQRSALFA--STGGVPFFTTHLEAP------------ITASAIRCEQVRALAGFVAEHS 147 Query: 200 ESLVPFVIAGDFNRKINYLGNN-------DDFWKTIDPNDSLIRFPKEKDSRCNAN---- 248 + P VI GDFN + + D+ + + Sbjct: 148 RAAHPPVITGDFNALPDSDELRLFSGVRTAPAVPGLVLIDAWEYAEPGQPAATWDTANPH 207 Query: 249 --KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +DY + + G SDH + + Sbjct: 208 VAATFTPSARVDYIHVG---VPGRNGAGHVTAVRRTGAAPVDGVWPSDHAAVVAEL 260 >gi|307294159|ref|ZP_07574003.1| Endonuclease/exonuclease/phosphatase [Sphingobium chlorophenolicum L-1] gi|306880310|gb|EFN11527.1| Endonuclease/exonuclease/phosphatase [Sphingobium chlorophenolicum L-1] Length = 244 Score = 91.9 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 76/286 (26%), Gaps = 57/286 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY- 77 + VR+ S+NI + + + LDADI+ LQE Sbjct: 11 FAMRTVRVASYNIRKAIGTDRRRVP-----------ERVIDVLNELDADIIALQEADRRF 59 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + P + + + DS AI VRK L Sbjct: 60 GVRSAALPPWLLESISPYKPVPLNVHVDSMGWHGNAILVRKDVEVGAHDVLHLP------ 113 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R A V ++ + V +HL S +QA + Sbjct: 114 -CLEPRGATMAEVTLDKGSLRVFGMHLDL-------------SGLWRRKQAAAV--IHAA 157 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-NANKNLRNKIP 256 +P V+ GD N + + C + R Sbjct: 158 SSRDAMPTVLMGDLNEWSA------------ERGCLADFARHYSFAPCGRSFHARRPVAR 205 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + L+ E + +R SDH PI ++ Sbjct: 206 LDRIMHCGQL--KLVDCGVHE--------SAAARRASDHLPIWAEF 241 >gi|90419377|ref|ZP_01227287.1| exodeoxyribonuclease III [Aurantimonas manganoxydans SI85-9A1] gi|90336314|gb|EAS50055.1| exodeoxyribonuclease III [Aurantimonas manganoxydans SI85-9A1] Length = 260 Score = 91.9 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 39/300 (13%), Positives = 82/300 (27%), Gaps = 67/300 (22%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + +WNIN + L + + DI LQE+ + + Sbjct: 3 IATWNING----------------VKARLDALLAWLQERSPDIACLQEIKNVDE------ 40 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + +A+ K V + + D +R Sbjct: 41 ----TFPREAIEALGYHVETHGQKGFNGVALLSKEKPVSIEPRLPGDSSDEHARF----- 91 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 +E + + +G+ + V ++L + L + + TY + Q L Sbjct: 92 IEGVWDFHGRPLRVASLYLPNGNPLGTEKFTYKLA------WMQRLLAHARDSMAREELL 145 Query: 206 VIAGDFNRKI---NYLGNNDDFWKTIDP-----------NDSLIRFPKEKDSRCNANKNL 251 V+AGD+N + + + N L + Sbjct: 146 VLAGDYNIIPERGDAARPDKWTGDALFQPESRAAYRRLINLGLSDAIRATTDADGTYSFW 205 Query: 252 RNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ ++ A + D ++ SDH P+ ++ Sbjct: 206 DYQAGAWQKNNGIRIDHLLLSPEAQDRMASAGI-------DRHVRGWEKPSDHVPVLVEL 258 >gi|298481016|ref|ZP_06999211.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp. D22] gi|298273039|gb|EFI14605.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp. D22] Length = 365 Score = 91.9 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 88/299 (29%), Gaps = 68/299 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + ++N++ + + + Y +NL ADI+ QE + Sbjct: 110 LTVATYNVDAFNHEHTGYSC-----------KEIASYMRNLQADILCFQEF----GINDE 154 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F ++ S + +AV + + +K+ Sbjct: 155 FGIDSISAALSNWPYH-YIPSSPEGKNLLQLAVFSRYPIKEEHLIIYPDSKNCS------ 207 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------PSC 181 + +EING+ I + + HL++ + + Sbjct: 208 --LACDIEINGRTIRLFNNHLQTTEVSQNKRKLEKGLRTDDSQRVEHAALGLIDGLHENF 265 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + QA LK I S P ++ GDFN + + TI + F + Sbjct: 266 QKRAVQADLLKQLI---AASPYPTLVCGDFNSLPSSYVYH-----TIKGDKLQDGFQRSG 317 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 K ++ + IDY + N D S SDH P+ + Sbjct: 318 HGYMYTFKYFKHLLRIDYILHSPEL--------------NSTDYFSPDLNYSDHNPVVM 362 >gi|217979561|ref|YP_002363708.1| exodeoxyribonuclease III Xth [Methylocella silvestris BL2] gi|217504937|gb|ACK52346.1| exodeoxyribonuclease III Xth [Methylocella silvestris BL2] Length = 303 Score = 91.9 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 84/303 (27%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N ++ ++L ++ K D+V LQE Sbjct: 1 MKIATFNVNGING----------------RLSVLLRWLKETRPDVVCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +A+ + + ++ L G D Sbjct: 35 LKAPDERFPIRELENAGYGAIWHGQKSWNGVAILSASGKPIETRRGLPGDPDDSQSRYLE 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A+ I V ++L + + Y Q Q L D+ + V Sbjct: 95 AAI--------DGIVVACLYLPNGNPAPGRKFDYK------LQWLQRLTDYAAELLALKV 140 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++AGD+N L + ++ + Sbjct: 141 PVILAGDYNIIPTELDVYKPERWVDDALFRLEVREAFQILVSQGWTDALRTLHPGERVYT 200 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +D+ +++ K LI + D ++ SDH P+ I Sbjct: 201 FWDYFRNAWDRNAGLRLDHLLLNPPVTKRLIAA-------DVDRAVRGWEKASDHAPVWI 253 Query: 301 DYD 303 + Sbjct: 254 ELS 256 >gi|300311792|ref|YP_003775884.1| metal-dependent hydrolase [Herbaspirillum seropedicae SmR1] gi|300074577|gb|ADJ63976.1| metal-dependent hydrolase protein [Herbaspirillum seropedicae SmR1] Length = 260 Score = 91.9 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 38/296 (12%), Positives = 75/296 (25%), Gaps = 62/296 (20%) Query: 12 FLVPCTASVAQ----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 ++ A V + + ++NI+ +G + L AD Sbjct: 20 LVLSADAPVPGRDPWPLTVATYNIHGAVGTDGRFAP-----------ERVAAVLDELQAD 68 Query: 68 IVFLQEMGSYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +V LQE+ A V AV + + + Sbjct: 69 VVALQEVPLGGADQVDVLALLRAHTGMFAAEGPTMESPA----RRYGNAVLSRYPILATE 124 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 S L SF R A++ ++ G+ + V+ HL + Sbjct: 125 SIDL-----SFGSREPRGALDADIDCRGQLLRVVATHLGLKP-------------AERRA 166 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 Q + L + + P ++ GD N + + F Sbjct: 167 QIKRL---LQAFDTNDAPVILLGDVNEWFMWGRTLRWL---------VGHFEAAPAPPTF 214 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ +D + + + + SDH P+ Sbjct: 215 PSRWPVF--ALDRIWISPRRRLQHLAV----------HRSALARVASDHLPLLAHI 258 >gi|221198686|ref|ZP_03571731.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2M] gi|221204948|ref|ZP_03577964.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2] gi|221174739|gb|EEE07170.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2] gi|221181137|gb|EEE13539.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2M] Length = 280 Score = 91.9 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 39/281 (13%), Positives = 79/281 (28%), Gaps = 58/281 (20%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + +R+ ++NI+ + LDAD++ LQE+ + Sbjct: 26 GRDLRIATYNIHG-----------GYGPWHARAADRIAAVIDELDADVIALQEVP----L 70 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + + + AV + ++ L SF + Sbjct: 71 GGTRGPDVLAHLRDATGMHAAAGPTIDTAERRYGNAVLSRYPIRAARTLDL-----SFHQ 125 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R A++ ++ + V+ HL S S Q Q L + Sbjct: 126 REPRGALDADIDCRTGPLRVVATHLGL-------------SARERSAQVQRL---LAAFD 169 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 +P ++ GD N + F + + RF + R +D Sbjct: 170 TGAMPVILLGDIN---------EWFVRGRALQALVTRFRRAPAPRTFPTVCPLFS--LDR 218 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ++ +R + SDH P+ Sbjct: 219 IWVHPG----------ELLVDVAVHRSARARHASDHYPLVA 249 >gi|212691650|ref|ZP_03299778.1| hypothetical protein BACDOR_01145 [Bacteroides dorei DSM 17855] gi|237711947|ref|ZP_04542428.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237725796|ref|ZP_04556277.1| conserved hypothetical protein [Bacteroides sp. D4] gi|212665839|gb|EEB26411.1| hypothetical protein BACDOR_01145 [Bacteroides dorei DSM 17855] gi|229435604|gb|EEO45681.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229454642|gb|EEO60363.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 281 Score = 91.9 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 36/296 (12%), Positives = 70/296 (23%), Gaps = 38/296 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 C VR ++N+ + Q+ ++ W + Q+ K+ + DIV +QE+ Sbjct: 17 CAEEKKTDVRWATFNVRYDNPQDSLNNW-------QYRKDRVCQFIKDRELDIVGMQEVL 69 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + + P Sbjct: 70 HNQFQDLRAGLPEYDGIGVGRDDGKTAGEYAPLFYRKDKYEVLDSNTFWLAENPDSVGMM 129 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + R A + + ++ F E S L+ ++ + + Sbjct: 130 GWDAVCVRIATWAKFKDKATGKIFMAVNTH---FDHVGEEARRQSALLIIRKIKEIV--- 183 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-- 253 P V+ GDFN D+ + Sbjct: 184 -----GERPAVVTGDFNVTDASDAYETITTNEFVMKDAYKTAARVTGVD---YTFHDFAR 235 Query: 254 -----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ + + LSDH P D +F Sbjct: 236 IPAEDCEKIDFIFVTPQVLVKNCEIPAEV----------PEALLSDHNPQLADLEF 281 >gi|163752163|ref|ZP_02159367.1| extracellular nuclease, putative [Shewanella benthica KT99] gi|161327940|gb|EDP99116.1| extracellular nuclease, putative [Shewanella benthica KT99] Length = 559 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 90/327 (27%), Gaps = 50/327 (15%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT------SDYTLLRQYAKNLDADIVFLQ 72 + + L S+N+ +G + + + ++AD++ L Sbjct: 70 AEGSNLILASFNVLNYFNGDGAGAGFPTPRGADTAAEFTRQRDKIIAAMVAINADVLGLM 129 Query: 73 EMGS-----YNAVAKVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQ 125 E+ + +A+A + I + ++ + + I + R V + Sbjct: 130 EIENDGFGSESAIADLVSGLNQAIGETRYAYVSAETAGGIGTDAITVGMIYRLDKVSLDG 189 Query: 126 QSYPLLGAKDS--------FSRAGNRRAVE--LLVEINGKKIWVLDIHLKSFCFL----- 170 + L A F+ NR + + + I V H KS Sbjct: 190 AAKVLSSANSPLDENNNPLFNDGKNRPMLTQGFRHLDSDEVIVVAVNHFKSKSSDCDSLG 249 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 D N +C+L +A + ++ GD N + Sbjct: 250 DPNMNDGQGNCNLTRTRAAEAVSLWLAAEYGEADVLVMGDLNAYAEENP-----LTALKN 304 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG- 289 F + +D+ + + N +I + I +E + Sbjct: 305 AGFTELFDHLDKENAYSYVYSGESGQLDHALANANLLDKIIDVTEWHINTDEPRLLDYNQ 364 Query: 290 ----------------KRLSDHCPISI 300 R SDH P+ I Sbjct: 365 EFKSDAQLTDLYNADAYRSSDHDPVVI 391 >gi|297562942|ref|YP_003681916.1| endonuclease/exonuclease/phosphatase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847390|gb|ADH69410.1| Endonuclease/exonuclease/phosphatase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 810 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 37/329 (11%), Positives = 88/329 (26%), Gaps = 72/329 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 +V + ++N+ L ++ + Y L DI+ L+E+ Sbjct: 495 HEVSVATYNVENLGGRDD-----------QARYDALAAGIVESLNSPDIIGLEEIQDNTG 543 Query: 80 ------------VAKVF-----PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + ++ + +I A + V+ Sbjct: 544 PTDDGVVDADVTLDRLVEAVEEHGGPAYEWRQISPEDKQDGGQPGGNIRNAFLFDPERVQ 603 Query: 123 VLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 + + P + + +R+ + + ++V+ Sbjct: 604 FVDREGGDATTAVEVVEGGRGAELSVSPGRISPRDGAWDSSRKPLVGHFRALNRDVYVVT 663 Query: 162 IHLKSFCFLDSLEN----TYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215 H S +SL S + QA ++D+ + + V+ GD N Sbjct: 664 NHFNSKGGDESLHGVHQPPRRTSEAQRHAQAGLVRDFAEELLAVDPEANLVVMGDLNDFQ 723 Query: 216 NYLGNNDDFWKTIDPNDSLIRF-PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 + + + L N +D+ +++Q + + Sbjct: 724 FSR-----TLEILTADGPLHNPMTDLPVEERYNYVFDGNSQALDHILVNQALAGRVEYDI 778 Query: 275 FSEILYNEDDIKSRGKRLSDHCP--ISID 301 D ++SDH P + +D Sbjct: 779 ARINSEFSD-------QVSDHDPQVLWLD 800 >gi|320334572|ref|YP_004171283.1| endonuclease/exonuclease/phosphatase [Deinococcus maricopensis DSM 21211] gi|319755861|gb|ADV67618.1| Endonuclease/exonuclease/phosphatase [Deinococcus maricopensis DSM 21211] Length = 1195 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 49/328 (14%), Positives = 90/328 (27%), Gaps = 55/328 (16%) Query: 20 VAQKVRLVSWNINTLSEQ-------------EGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 VR+ N+ + + N+ + K L+A Sbjct: 507 QNATVRVAGANVLNYFTALVNSNTGCTTDGVDANARGANNCGEFLRQQAKVVAALKGLNA 566 Query: 67 DIVFLQEMGSYNAVAKV-FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 D+V L E+ + A + H+ + IH A+ + Sbjct: 567 DVVTLMEVQNNGDKALANLTDALNAAVGAGTYDYIHTGTIGTDAIHVAMIYKP------A 620 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKS-FCFLDSLENTYSPSCS- 182 P+ + + +R + + N G V+ HLKS S + C Sbjct: 621 NVTPVGAYRIDNNNVYSRPPLAQTFKDNHGGVFTVVANHLKSKGSCPTSGDIDNGQGCWN 680 Query: 183 -LLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 L QQAQ L +++ ++ GDFN N N TI + Sbjct: 681 TLRVQQAQALLNFVDTLKTATGDQDVLLMGDFNAYGNEDPIN-----TIVAGGFESLNKR 735 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG---------- 289 + + +D+ + + + I +E + Sbjct: 736 IPAEDRYSYQFGSLFGYLDHALATNTLAGQVTGITEWHINSDEPTVADYNVEFKNVPGCT 795 Query: 290 --------------KRLSDHCPISIDYD 303 R SDH P+ + + Sbjct: 796 SASCTGLDLYGPGPFRASDHDPVLVGLN 823 >gi|85711701|ref|ZP_01042758.1| Exonuclease III [Idiomarina baltica OS145] gi|85694561|gb|EAQ32502.1| Exonuclease III [Idiomarina baltica OS145] Length = 269 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 76/312 (24%), Gaps = 76/312 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN + L+ D++ LQE + Sbjct: 1 MKFISFNING----------------IRARLHQLQAMIDKHQPDVIGLQETKVHDDQFPQ 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + H +A+ K Q G + A Sbjct: 45 QAVEDMGYHV------------NFFGQKGHYGVALLSKKPLTNVQK----GFPNEPEDAQ 88 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + +G + VL+ F + + +Q + L +++ Sbjct: 89 RRMIMGDYPLDDGATVRVLN-----GYFPQGESRDHPTKFPMKAQFYRDLINYLNDDLSP 143 Query: 202 LVPFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKE 240 P ++ GD N D+ + + + Sbjct: 144 EQPVIVMGDMNISHQDRDIGIGETNAKRWLRTGKCSFLPEERDWLNEVLDWGLIDTYRTL 203 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N + ID + Q + D ++ Sbjct: 204 NPEQDNEFSWFDYRSRGFDDNRGLRIDLILATQTLADRCEESGI-------DYELRGIEK 256 Query: 292 LSDHCPISIDYD 303 SDH PI + Sbjct: 257 PSDHAPIWSQFS 268 >gi|212696938|ref|ZP_03305066.1| hypothetical protein ANHYDRO_01501 [Anaerococcus hydrogenalis DSM 7454] gi|212676026|gb|EEB35633.1| hypothetical protein ANHYDRO_01501 [Anaerococcus hydrogenalis DSM 7454] Length = 348 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 100/321 (31%), Gaps = 60/321 (18%) Query: 18 ASVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 + + R+++WNI G ++ + + +KN++ADI Sbjct: 49 PEIGKNYRVMTWNIGYGGLDKDTDFFMDGGQMVFPINKNHVEKSIDHIISTSKNINADIK 108 Query: 70 FLQEMG-------SYNAVAKVFPK--------NTWCIFYSTERLINHSKRDSNNDIHTAI 114 QE+ N V K+ + + + K S TA Sbjct: 109 LFQEVDYDSKRSFHINQVDKLRENFLGSSTFALNFKTDFIPYPIPPMGKVQSGIMTQTAF 168 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++K + + + RA N + ++ + KK+ ++++HL ++ + Sbjct: 169 KIKKSKRYQQEIPHKFPTRLVNLKRAFN--PSYIDIKNSDKKLVIVNVHLDAYESGNKG- 225 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN-------------YLGNN 221 Q + + D+I ++ + ++ GDFN++++ Sbjct: 226 ---------RVAQTKEIIDFINKEYKKGNYVLVGGDFNQELSAKFKKLPEGIWNPSPFPK 276 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + K I + + K ID F+ N Sbjct: 277 EMLTKNIKLYYDKNGKTSVVNDKPYTGK-DAYLSTIDGFLATDNIKIK-----------T 324 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 + SDH P+ +++ Sbjct: 325 IKTQTKENFQYSDHNPVVMEF 345 >gi|326336417|ref|ZP_08202587.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691290|gb|EGD33259.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 347 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 44/353 (12%), Positives = 93/353 (26%), Gaps = 66/353 (18%) Query: 2 IRKYVLALVFFLVPCT---ASVAQKVRL---VSWNINTLSEQ-------EGVSLWKNSVK 48 ++K+ L L + + ++ ++ +N+ L + + Sbjct: 1 MKKFCLPFCILLTLNSLFVEAQSKTYKVRTVAFYNVENLFDTINDPKKFDDDRTPTGKDH 60 Query: 49 RTTSDY-----------TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER 97 T+ Y + + D V L E+ + + V + Y Sbjct: 61 WTSEHYFDHINKLSTTIAKIGKDVTGQAPDFVGLAEVENRDVVEDLINSEALKGNYYGIV 120 Query: 98 LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS-RAGNRRAVELLVEINGKK 156 N I A ++ + + S L KD+ R R + + E++G++ Sbjct: 121 HYNSP---DARGIDVAFLYKQGVFKPTKTSKHFLDIKDAAGKRRYTRDQILISGEMDGEE 177 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP---FVIAGDFNR 213 I + H S ++ + L + A L I ++ P + GDFN Sbjct: 178 IHFIVNHWPSRSGGEA-------ASRPLREAAAALNKRIFDSLTTINPMAKVISMGDFND 230 Query: 214 KINYLGNNDDF-----WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM------ 262 G + + + D F++ Sbjct: 231 DPTNSGFKKVLKTKADKNKVRQGELYNPMESMYKKGIGTLAYRDSWSLFDQFIITYGYLA 290 Query: 263 ---------------DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ + S SDH P+ + Sbjct: 291 PEGKGYKYWKAGVFNSPELANP--SGRYAGYPFRSYANGSYTGGYSDHFPVYL 341 >gi|46201082|ref|ZP_00055781.2| COG0708: Exonuclease III [Magnetospirillum magnetotacticum MS-1] Length = 263 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 77/306 (25%), Gaps = 70/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RLV+WNIN LL Q A ++ DI+ LQE+ + Sbjct: 1 MRLVTWNIN----------------SIRLRIDLLSQVASVMNPDIICLQEI---KVDDPL 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + +A+ + + G D R Sbjct: 42 FPLDQCR------EMGFGHIAFHGMKGYNGVAILSRLPIAEWRPMSRCGRDD-------R 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + +E V L D + + + + + W + Sbjct: 89 RHLMARLENG-----VQIHCLYIPAGGDIPDPETNDKFAHKLDFVREITAWAAAEIRPED 143 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++AGDFN + D + + Sbjct: 144 KVILAGDFNIAPLENDVWSHKQMLKVISHTPAEVDLLNAFLASVPFVDAMRHFVPPEDKL 203 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + L + SDH P Sbjct: 204 YTWWSYRSPDWQKNDRGRRLDHVWVTPALAPSLRG-------MLVAREARAWTQPSDHVP 256 Query: 298 ISIDYD 303 + +D+D Sbjct: 257 VMVDFD 262 >gi|270296071|ref|ZP_06202271.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D20] gi|270273475|gb|EFA19337.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D20] Length = 267 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 83/280 (29%), Gaps = 34/280 (12%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + ++ ++S+N+ + ++GV+ W+ T + K DI+ +QE + Sbjct: 14 SSQLTVISYNMRYGTAEDGVNAWEFRKPAT-------IKMIKKHKPDILGVQEALDFQLA 66 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + H ++ + + S P + + A Sbjct: 67 FILENCTNYEAVGVGRIDGKHDGEHASIMYNKKKIELLEWGNFWLSSTPEIP-SIGWDAA 125 Query: 141 GNRRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R A L++ +K + ++ HL + + + + I + Sbjct: 126 CTRTATWALLKDKKTMEKFYYVNTHLDHVGRV------------ARKEGLNLILEKIQKI 173 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 P ++ GDFN + K ID S + ++ ID Sbjct: 174 NPDNFPLILTGDFNMEHTDSSIQKLNEKMIDARTSAKKTDSFGTFNGWGTRS----SIID 229 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 Y + + +SDH PI Sbjct: 230 YIYY--------KGFKMCTEYVTIREKYAGKTFISDHYPI 261 >gi|119486376|ref|ZP_01620435.1| hypothetical protein L8106_17019 [Lyngbya sp. PCC 8106] gi|119456589|gb|EAW37719.1| hypothetical protein L8106_17019 [Lyngbya sp. PCC 8106] Length = 282 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 94/306 (30%), Gaps = 47/306 (15%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 +L + + P + A+ + ++S+N+ + + +D L+ + + + Sbjct: 15 ILLVMFVAIAPTFPASAEPLSIISYNVESDDLDD-------------TDPHLVAEDIREI 61 Query: 65 -DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 AD+ L E+ A TE + + T + + Sbjct: 62 VGADLWGLSEVADQAAAD-----------IFTEAVAVPGSDFKSIFGTTGSLDKLQI-IY 109 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 Q LL ++ + G+R + + L S S Sbjct: 110 NQNRLDLLDHEELDNIGGSRSPLVAHFKFLSTGQEFLFTVNHF----------NRGSESK 159 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-DDFWKTIDPNDSLIR-----F 237 +QQA+ L+DW + +P + GD+N + + + D + Sbjct: 160 RNQQAENLRDWAAAQS---LPVIAVGDYNFDFDLDKKKGNKAFDLFVRKDVMTWIKPNCL 216 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + +DY + Q A K+ + + + SDH P Sbjct: 217 KTNSCPLTGTQCDPKYASILDYVFVSQMAKKW--PCESDILFVQNQVCQKEKEGFSDHYP 274 Query: 298 ISIDYD 303 + ++ Sbjct: 275 LMANFS 280 >gi|325856384|ref|ZP_08172100.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola CRIS 18C-A] gi|325483568|gb|EGC86540.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola CRIS 18C-A] Length = 347 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 94/352 (26%), Gaps = 64/352 (18%) Query: 2 IRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSE-------QEGVSLWKNSVKRT 50 +RK + L ++ ++ AQK + +N L + + + S Sbjct: 1 MRKLLFVLFCTVLFGASASAQKKFSVYAVGFYNQENLFDCMHDKGKNDYDFTPEGSYHWN 60 Query: 51 T----SDYTLLRQYAKNLDADI--------VFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + + D+ + L E+ + + + + + + Sbjct: 61 EMKYTHKLHNMATVLSEMGTDVLPDVGCALIGLAEVENDHVMRDLTAQPE---LAARNYQ 117 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 H + + I A+ K V P + S R + + + G+ + Sbjct: 118 YVHIEGPDHRGIDCALIYNPKLFSVRNTKLVPYVYDLPKDSMRATRGFLTVSGTLAGEHV 177 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 V+ HL S Q + LKD + + + V ++ GD N Sbjct: 178 TVVVCHLPSRGADSYYRELGGR-------QVKALKDSLLRD-DPKVKVLVMGDMNDDPTN 229 Query: 218 LGNNDDFWKTID------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 + + + + + D +M Sbjct: 230 KSIRECLSAKAEISEVGPDDMYNPWYNVLVKEGTGTLQYQGKWNLFDQILMSPGLLNKEN 289 Query: 272 QESFSEILYNEDDIKSRGK-----------------------RLSDHCPISI 300 ++ FSE+ + + I R SDH P+ Sbjct: 290 RKDFSELRFWKSQIFRRDYLFQETGKYKGNTKRTTAGGVWLDGYSDHLPVVA 341 >gi|71034157|ref|XP_766720.1| sphingomyelin/lysocholinephospholipid-phospholipase C [Theileria parva strain Muguga] gi|68353677|gb|EAN34437.1| sphingomyelin/lysocholinephospholipid-phospholipase C, putative [Theileria parva] Length = 314 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 87/312 (27%), Gaps = 35/312 (11%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + ++S+N+ + R Y L + + D++ LQE N Sbjct: 9 DTLSVMSYNVQCIPWYLAPGYNIGIRARILPKY--LVELVRKYAVDVLILQECFDRNVFN 66 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGA 133 + +ST+ + + DS D + + + + + Sbjct: 67 TFKLALQTLLPFSTDLIGLKNDWDSTVDNSNRWLILTNGGVCIMSRYPILERHQLIFKNC 126 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 +++ S A ++ A ++ GK++ V+ HL+++ + + + L Sbjct: 127 RNTCSLA-SKGACVAVISKAGKRVNVVGTHLQAY--DGPAKTVRQKQYKEIIHWLELLSR 183 Query: 194 WITQKKESLVPFVIAGDFNR-KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 PF++AGD N + + N + Sbjct: 184 S-EHGVSDDDPFILAGDLNTCCLTDTPEFKAMLSPREKNFIKFSHTLGDKDPTYCSITND 242 Query: 253 NK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR-----------GKRL 292 DY + Q + L+ ++ Sbjct: 243 YCKMCNVDSISSVFDYILAGPGVRVVHPQTVVRDKLHAPIRVRKYYLHCIGTCTMETYNP 302 Query: 293 SDHCPISIDYDF 304 SDH P+ F Sbjct: 303 SDHYPVYSILAF 314 >gi|270294111|ref|ZP_06200313.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270275578|gb|EFA21438.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 361 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 86/305 (28%), Gaps = 62/305 (20%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + +++ ++NI+ + T + +Y + D++ QE G Sbjct: 98 TPAGKYLKIATYNIHNFGG-----------EITGYSCKEIARYMQQEGVDVLCFQEFGDN 146 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + FP ++ S DS V+ + YPL + Sbjct: 147 SD----FPTDSIRRVLSHWSHALIPSEDS---------VKGVLPIAVFSRYPLANHRFIT 193 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP---SCSLLSQQA------ 188 + + ++ V + I +++ HL++ + QA Sbjct: 194 YQQSSNCSMMCDVAMGTDTIRLINNHLQTTSVSQKRRKWERELATDDTRREVQAAKDAAG 253 Query: 189 --------QWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + ++ P ++ GDFN + + KT+ F Sbjct: 254 TLHENFMKRATQTYVISHYAKTSPYPVLLCGDFNSIPSSYTYHH-LRKTLKDG-----FR 307 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + + IDY + SDH P+ Sbjct: 308 TAGNGYMYTYRYAKRMLRIDYIFHSPSLK-------------GIAYYSPDLDLCSDHNPV 354 Query: 299 SIDYD 303 ++ + Sbjct: 355 IMEVE 359 >gi|170703657|ref|ZP_02894392.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria IOP40-10] gi|170131435|gb|EDT00028.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria IOP40-10] Length = 271 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 31/300 (10%), Positives = 81/300 (27%), Gaps = 68/300 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + + D++ LQE Sbjct: 14 MKIATWNVNSLN----------------VRKQHVLDWIAHSGTDVLCLQE---------- 47 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + I + + + +A+ ++ + +S + Sbjct: 48 LKLPDEKYPRADLEAIGYRSWFTGQRTYNGVAILVRDTLAVDESDVVRNIPGFDDPQQRV 107 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 AV + + ++ + + DS + Y Q L W++ + + Sbjct: 108 IAVTVE------GVRIVSAYFPNGQSPDSDKFVYK------MQWLDALHAWLSAEMQRYP 155 Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249 + GD+N +D + P + + + Sbjct: 156 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAKLLELGFVDAFRCFEQPEKTFT 215 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ D + ++ SDH P+ Sbjct: 216 WWDYRMLAFRRNAGLRIDHILLSPALAANCTSCEV-------DRLPRTWEQPSDHTPVVA 268 >gi|300115398|ref|YP_003761973.1| exodeoxyribonuclease III [Nitrosococcus watsonii C-113] gi|299541335|gb|ADJ29652.1| exodeoxyribonuclease III [Nitrosococcus watsonii C-113] Length = 254 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 89/305 (29%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L ++ + + + D + LQE K+ Sbjct: 1 MKIATWNVNSL----------------RVRFSQVVDWLEIHQPDALALQE-------TKL 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-VRVLQQSYPLLGAKDSFSRAGN 142 +N + + S + +A+ + + + P L Sbjct: 38 VDENFPQEAFKDI---GYHAVYSGQKTYNGVAILCRQEPKDILTDLPNLVDS-------Q 87 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 RR + + ++ I VL++++ + + S + Y +KD++ + Sbjct: 88 RRILGVTLD----DIHVLNLYVPNGSEVGSEKYAYKLD------WLGRIKDYLQEALVEY 137 Query: 203 VPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 ++ GDFN + + + + + + Sbjct: 138 PKLIVLGDFNVAPADQDVYDPEVWHETILCSTPEREALQEILALG--FQDSFRLFEQQAQ 195 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + ID ++ + + D R R SDH P Sbjct: 196 SFSWWDYRGGAFHRNRGLRIDLILISKALVSKCMGCVI-------DKEPRRLPRPSDHAP 248 Query: 298 ISIDY 302 + + Sbjct: 249 VIATF 253 >gi|46201885|ref|ZP_00208288.1| COG0708: Exonuclease III [Magnetospirillum magnetotacticum MS-1] Length = 258 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 77/304 (25%), Gaps = 72/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + + + D+V LQE+ + Sbjct: 3 LRIATWNVN----------------SVRARLGNVLDWLGSFAPDVVLLQEIKCQD----- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ ++ D +R Sbjct: 42 -----HDFPRLEIEAAGYQTAVHGQKSYNGVAILSRHAMSDISLRLPGDESDEQARY--- 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + + ++L + + Y + L+ + Sbjct: 94 ------IEATIEGWRLASLYLPNGNPAPGDKYDYKLA------WMARLRAHAQSLLTQDI 141 Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 PFV+ GDFN D ++ I F Sbjct: 142 PFVLGGDFNICPTDDDVYDPPNWQNDALCRPDSRAAFRAIVNLGLTEAFRALHPEEKGRY 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+F++ A L + D ++ SDH P+ Sbjct: 202 SFWDYQAGAWQRDEGLRIDHFLLSPRAADHLQAC-------DIDRAPRGKEKASDHTPVW 254 Query: 300 IDYD 303 I+ Sbjct: 255 IELS 258 >gi|326521854|dbj|BAK04055.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 396 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 40/328 (12%), Positives = 84/328 (25%), Gaps = 40/328 (12%) Query: 15 PCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 P + + RLVS+NI + ++ + + + K+ +AD++ +Q Sbjct: 64 PDAGADGHQFRLVSYNILAQVYVKSAFFPHSPSASLKWKARSKAVLTELKSFNADLMCIQ 123 Query: 73 EMGSYNAV-AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------ 125 E+ Y K + + Y + ++K+ + Sbjct: 124 ELDEYETFYRKNMESSGYSSIYVQRSGDKRDGCGIFYKPKSVELLQKEVIHYNDLVETCL 183 Query: 126 ----------------------QSYPLLGAKDSFSRAGNRRA--VELLVEINGKKIWVLD 161 + G D R + +++ +L Sbjct: 184 LDDTVISAPSNNSSPSEESSGKEDNKKRGDPDDPRVRLKRDCVGLLAAFKLSDPCEHILI 243 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 + + + L + + I+ K +IAGDFN N Sbjct: 244 VANTHIYWDPEWIDVKLAQAKYLLSKVFEFEKIISNKFTCKPSVIIAGDFNSTPGDKVYN 303 Query: 222 DDFWKTIDPNDSLI-----RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ--ES 274 + + D + N +DY + + Sbjct: 304 YLVSASSESTDEAPIKLRSLYAANGGEPEFTNCTPGFTGTLDYIFLSGDNSIKPTTLLRI 363 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + SDH PI D+ Sbjct: 364 PRGGSPDVEGGLPNFHHPSDHLPIGADF 391 >gi|254444166|ref|ZP_05057642.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae bacterium DG1235] gi|198258474|gb|EDY82782.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae bacterium DG1235] Length = 307 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 98/311 (31%), Gaps = 22/311 (7%) Query: 2 IRKYVLALVFFLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLWKNSV--KRTTSDYTL 56 IR +++ + L T + +R+ ++N+ + + V + S+ T+ Sbjct: 6 IRVLAVSVTWLLASVTCLSQESIETLRVATYNLRNYLAMDRIVEGDFRVNYPKPESEKTV 65 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 +R+ ++ D++ +QE+GS + ++ + + Sbjct: 66 VRESILAVEPDLLAIQEIGSEELLLELRDDLANEGLVYEGYFL---LEADDQTRKIGALW 122 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLEN 175 + + R +EL ++ G+ + + +HLKS D Sbjct: 123 NGALKVRPIAHTDMSFPFFGDRKKIKRGLLELQLDDFGGEPLSLFVVHLKSRYTSD---K 179 Query: 176 TYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 S + +A+ +D I S+ F+I GD N + + Sbjct: 180 RDPKSARRRTSEAEAARDRILERFPDPSVSRFIIMGDLNDYRHTSSVRRFLERGDVRISV 239 Query: 234 LIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + E + K IDY + +Y+ ++ + Sbjct: 240 IQEARDESGLIWTHFYKKGGEYSLIDYILCSPGLED---ASEMKSAIYDSENY----YQG 292 Query: 293 SDHCPISIDYD 303 SDH + + Sbjct: 293 SDHRLVWTELT 303 >gi|167569725|ref|ZP_02362599.1| endonuclease/exonuclease/phosphatase family superfamily protein [Burkholderia oklahomensis C6786] Length = 286 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 84/308 (27%), Gaps = 52/308 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 +RL+SWNI + +G T D A+ L D D++ +QE+ Sbjct: 1 MRLISWNIQWGRDADG-----------TVDLARTIDAARRLVDFDVLCMQEVTRGFRALP 49 Query: 75 --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 S + A++ + + A+ + + L Sbjct: 50 GGPSDDQYAELAALLPGYSVFDAIGVDLPPLEPGAPRRQFGNALATRLPVERVMRHALPW 109 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + + + R A+E+ + + V+ HL+ + + L ++A Sbjct: 110 PASAAAPSMPRCALEVTLRAPLGALRVVVTHLEYYSA--EQRLAQVDALRRLHREAAAHT 167 Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + PF ++ GDFN D + + Sbjct: 168 RASAPPETPTGPFAPSARAADAIVCGDFNSAYRSDAYRRFLAPFPDAPRFVDAWLARHPG 227 Query: 244 RCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + D+ + L + R SDH Sbjct: 228 ETPPMTAGVYDTEQWKEGPLTCDFAFVTDTLIGRLSRCEI-----------DGAVRASDH 276 Query: 296 CPISIDYD 303 PI+++ Sbjct: 277 QPIALELS 284 >gi|260464219|ref|ZP_05812412.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075] gi|259030022|gb|EEW31305.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075] Length = 289 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 40/326 (12%), Positives = 83/326 (25%), Gaps = 72/326 (22%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 VL L +P T + +WNIN ++ + Sbjct: 6 VLELAGLALPRTGFPRMPFSIATWNIN----------------SVRLRMPIVERLLVEQA 49 Query: 66 ADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 D++ LQE + K F K + + +A + Sbjct: 50 PDVLCLQETKVPDELFPEKAFRKLGYEHIA-----------FHGQKGYHGVATVARRPIA 98 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + + +DS + + V GK I V + ++ + D + + Sbjct: 99 VVEKRRFCEIEDSRH-------LSVTVRAGGKTILVHNFYVPAG--GDEPDPVINKKFKH 149 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKI--NYLGNNDDFWKTID------------ 229 + I + + + V+ GD N + + ++ + Sbjct: 150 KLDFVAEMNA-IRAEHDEVSASVLVGDLNIAPLEHDVWSHKQLLNVVSHTPVETENFEAM 208 Query: 230 --PNDSLIRFPKEKDSRCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSE 277 + + S + +D+ N Sbjct: 209 RLAGNWIDLMRLNVPSEQKLYTWWSYRAQDWEASNRGRRLDHVWSSPNLVPSFTG----- 263 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 Y + +R SDH P+ +D Sbjct: 264 --YEILRLARGWERPSDHVPVIARFD 287 >gi|182437355|ref|YP_001825074.1| hypothetical protein SGR_3562 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178465871|dbj|BAG20391.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 295 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 81/291 (27%), Gaps = 55/291 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----SYN 78 +R+ ++NI+ + +GV D + L AD++ LQE+ + Sbjct: 43 PLRVATYNIHAGAGVDGVF-----------DLDRQTAELRALRADVIGLQEVDRHWGDRS 91 Query: 79 AVAKVFPKNTWCIFYSTERLINHS-----KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + + +S D + A+ R + V L Sbjct: 92 EWRDLAGELARRLRLHVSFAPIYSLDPARPGDPRKEYGVAVLSRYRIVSAENHEITRLST 151 Query: 134 KDSFSRAGNRRAV-ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 +D E++V + G + V HL Y P ++ Q + Sbjct: 152 QDPNPAPAPAPGFGEVVVRVRGLPVHVYTTHL-----------DYRPDPAVRVAQVADTR 200 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + + + P ++ GDFN + W+ + D Sbjct: 201 RIMAEDRG---PKILLGDFNAEPA-APELAPLWRELADADP----------GAPTFPAQD 246 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID+ + + SDH P+ D Sbjct: 247 PVKRIDFVAVSRGGPG---------TGITVRKAWVPESVASDHRPVVADLS 288 >gi|163745969|ref|ZP_02153328.1| possible Endonuclease/Exonuclease/phosphatase fa [Oceanibulbus indolifex HEL-45] gi|161380714|gb|EDQ05124.1| possible Endonuclease/Exonuclease/phosphatase fa [Oceanibulbus indolifex HEL-45] Length = 333 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 43/333 (12%), Positives = 91/333 (27%), Gaps = 54/333 (16%) Query: 24 VRLVSWNINTLS----EQEGVSLWKNSVKRT----TSDYTLLRQYAKNLDADIVFLQEMG 75 +R+ ++N+ + + + R L LDAD + + E Sbjct: 1 MRVATYNVEWFASLFDDDNRLYDDGGWSSRYNVTRAQQTAALGLVFTALDADAIMVIEAP 60 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 ++ + + R SN+ IA+ ++ + P Sbjct: 61 NHGRRQSTVAALKYFAARFSLRARAAVMGFSNDTEQE-IALLYDPDKLTARHAPQAATGA 119 Query: 136 SFSRAGNRRAVELLVEIN-----------------GKKIWVLDIHLKSFCFLDSLENTY- 177 R +++ + G V+ HLKS + Sbjct: 120 PRFDQTLRIDLDVDATKDAVVFSKPPLELEVTTKAGFAFQVIGAHLKSKAPYGAKSEADV 179 Query: 178 ----SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK------- 226 + QA WL+ I + P ++ GD N F + Sbjct: 180 LRIAIANRRKQLAQAIWLRRRIDMHLAADRPVMVMGDLNDGPGLDEFESLFGRSSVEIIL 239 Query: 227 ------TIDPNDSLIRFPKEKDSRCNANKNLRNKIP-----IDYFVMDQNAYKFLIQESF 275 DP+ + + +A + + +DY ++ + Sbjct: 240 GEGEAALFDPHAKQALSRRLGAAPTSARFWIAPEERFLQALLDYIMVSPQIRARDARWRI 299 Query: 276 SE-----ILYNEDDIKSRGKRLSDHCPISIDYD 303 + + ++ SDH P+++D D Sbjct: 300 WHPMDDPACWRNEALRDALLAASDHFPVTLDVD 332 >gi|296274120|ref|YP_003656751.1| endonuclease/exonuclease/phosphatase [Arcobacter nitrofigilis DSM 7299] gi|296098294|gb|ADG94244.1| Endonuclease/exonuclease/phosphatase [Arcobacter nitrofigilis DSM 7299] Length = 325 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 49/326 (15%), Positives = 110/326 (33%), Gaps = 51/326 (15%) Query: 24 VRLVSWNINTLSEQE---GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++ ++N+ + + + ++ + ++ K LDADI+ QE+ S + Sbjct: 3 IKFTTFNLFQFTAPPFSWYFKKDRFTKEQWEQKVSWIKDQIKLLDADIIGFQEVFSIEEL 62 Query: 81 AKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG---AKDS 136 ++ + + F S + IN A+A R + Y L Sbjct: 63 KELCKELGYEYFLSVDKPKINKQNPTIYKTTVLALASRFPIISNKNVRYDLASIKKHNFK 122 Query: 137 FSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLD--------------------SLEN 175 A +R ++ ++E+ K I V HLKS + +LEN Sbjct: 123 DKFAFSRVPIKAIIELPNKTKIAVYVNHLKSNRLNEFEYIFKEGTSLKEKIEKTKVALEN 182 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----NDDFWKTIDPN 231 +S + +A L I + S +P + D N K + N + + ++ + Sbjct: 183 DFSSALKQRLIEASSLYMDIKE---SKIPTIFLCDLNDKEFSMTIDALTNKAYHEELEED 239 Query: 232 DSLIRFPKEKDS--------------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 + ++ R + ++ ID+ + + ++ + Sbjct: 240 EYILFDSYYHCEKEIYNPHPEQKEIKRTPTSYYFSDENVIDFIFVSEQLKDKIVSYKVFD 299 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + + SDH + + D Sbjct: 300 EHLQKNRNGTLLE--SDHAQVVCEID 323 >gi|265753182|ref|ZP_06088751.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|263236368|gb|EEZ21863.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 281 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 36/296 (12%), Positives = 70/296 (23%), Gaps = 38/296 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 C VR ++N+ + Q+ ++ W + Q+ K+ + DIV +QE+ Sbjct: 17 CAEEKKTDVRWATFNVRYDNPQDSLNNW-------QYRKDRVCQFIKDRELDIVGMQEVL 69 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + + P Sbjct: 70 HNQFQDLRAGLPEYDGIGVGRDDGKTAGEYAPLFYRKDKYEVLDSNTFWLAENPDSVGMM 129 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + R A + + ++ F E S L+ ++ + + Sbjct: 130 GWDAVCVRIATWAKFKDKATGKIFMAVNTH---FDHVGEEARRQSALLIIRKIKEIV--- 183 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-- 253 P V+ GDFN D+ + Sbjct: 184 -----GERPAVVTGDFNVTDASDAYETITTNEFVMKDAYKTAARVTGVD---YTFHDFAR 235 Query: 254 -----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ + + LSDH P D +F Sbjct: 236 IPAEDCEKIDFIFVTPQVLVRNCEIPAEV----------PEALLSDHNPQLADLEF 281 >gi|150010182|ref|YP_001304925.1| hypothetical protein BDI_3605 [Parabacteroides distasonis ATCC 8503] gi|255012556|ref|ZP_05284682.1| hypothetical protein B2_01514 [Bacteroides sp. 2_1_7] gi|149938606|gb|ABR45303.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] Length = 365 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 94/334 (28%), Gaps = 78/334 (23%) Query: 4 KYVLALVFFLVPCTASV--------------AQKVRLVSWNINTLSEQEGVSLWKNSVKR 49 K++L +F + C V + ++++++N+ + + N Sbjct: 68 KFLLIGIFSFLLCWGPVKRYFPFHSHKDVPREEVLKVLTYNVMAFGYKNHTKIAPN---- 123 Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 + QY N DADIV LQE + + + + S + + S Sbjct: 124 ------KIIQYIANSDADIVCLQEYATAKSEKSLTASKIYDA-LSMYPYRSVFYQSSTKF 176 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 IAV K + + + V I GKK+ +++ HL+SF Sbjct: 177 QSFGIAVFSKYPLSNSRMVKYDSDYN--------GSSVHEVNIKGKKLTLINNHLESFKL 228 Query: 170 LDSLENTYS-----------------------PSCSLLSQQAQWLKDWITQKKESLVPFV 206 YS P+ + ++QA+ + I + Sbjct: 229 TMEDRTRYSSLIKSFSSDGLDDLKGAFEQKLGPAFRIRAKQAEAVSKEIKN--AKGDYVL 286 Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 + GDFN + D F + ID + N Sbjct: 287 VCGDFNDTPISYAHRTI------QGDLTDAFAESGRGMGITYNQNFFWFRIDNILHSPNM 340 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + SDH P+ Sbjct: 341 TSM--------------NCSVDKVAYSDHYPLWC 360 >gi|50311541|ref|XP_455795.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|74605084|sp|Q6CJU4|CCR4_KLULA RecName: Full=Glucose-repressible alcohol dehydrogenase transcriptional effector; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase gi|49644931|emb|CAG98503.1| KLLA0F15884p [Kluyveromyces lactis] Length = 790 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 49/325 (15%), Positives = 91/325 (28%), Gaps = 43/325 (13%) Query: 22 QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 L+S+N + + + + L++ + D D++ LQE+ + Sbjct: 452 NSFTLLSYNTLCHHYATPKMYRFTPSWALSWDYRREKLKEQLLDFDTDVICLQEVETLTY 511 Query: 80 VAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 P +F++ R +DS AI +K +++ Q + Sbjct: 512 EEYWVPLMEKYNYSCLFHAKTRAKTMHAKDSKKVDGCAIFYKKDQFQLVFQDSIDFSSAW 571 Query: 136 SFSRAGNR-------------RAVELLVE--INGKKIWVLDIHLKSFC-FLDSLENTYSP 179 + +R A+ ++ + +WV+ HL F D Sbjct: 572 RSHKKFHRTEDYLNRAMNKDNVALIAELKHLNTNENVWVVTTHLHWDPQFNDVKTFQVGV 631 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL--------------------G 219 L + +P VI GDFN +++ Sbjct: 632 MLDYLETLIKQHHHVNNNNDIKKIPMVICGDFNSQLDSAVVELFNSGHVTANHKDIDQRD 691 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEI 278 K N SL N IDY Q+ + E Sbjct: 692 FGYMSQKNFSHNLSLRSSYGAIGELPFTNMTPSFTDVIDYIWYSSQSLRVRGLLGKIDEE 751 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303 ++ K SDH P+ ++ Sbjct: 752 YASKFIGFPNDKFPSDHIPLVTRFE 776 >gi|298293932|ref|YP_003695871.1| endonuclease/exonuclease/phosphatase [Starkeya novella DSM 506] gi|296930443|gb|ADH91252.1| Endonuclease/exonuclease/phosphatase [Starkeya novella DSM 506] Length = 269 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 83/285 (29%), Gaps = 60/285 (21%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 ++RL++WNI+ + D + D++ LQE+ + Sbjct: 5 PPPGRLRLMTWNIHGGIGPDRRF-----------DLDRIASLVAKHAPDVLALQEIDTRG 53 Query: 79 -AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + P I + T ++ + D H A+ + + L S Sbjct: 54 RDIDCLAPLRGLDIHHFT-----EARTIAVPDGHYGHALFSRWPTSDVVLHDL-----SV 103 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R R A+E + + ++ +HL F F +QA L + Sbjct: 104 WRYEPRIAIETQIATPFGPLHLVAVHLGLFIF-------------ERRRQAGMLAAMARR 150 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 +P V+ GDFN ++ + L + + + Sbjct: 151 V--RGMPTVMMGDFNDWFSFGQVTRTMSHVLPERTRL-----------RTFPAQKPALRL 197 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D + + +SDH PI +D Sbjct: 198 DRVYCSAPGM------------LADAFTDPAARAISDHLPIIVDL 230 >gi|330448477|ref|ZP_08312125.1| endonuclease/Exonuclease/phosphatase family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492668|dbj|GAA06622.1| endonuclease/Exonuclease/phosphatase family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 352 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 47/343 (13%), Positives = 109/343 (31%), Gaps = 55/343 (16%) Query: 14 VPCTASVAQ-KVRLVSWN-INTLSEQEGVSLWKN--SVKRTTSDYTLLRQYAKNLDADIV 69 + +AQ +++ S+N +N L+ + ++N S+++ + DI+ Sbjct: 9 FSSSTPIAQSTIKIASFNLLNYLAPPDAYYDFENIYSIEQWQKKQRWIVATLNAQQPDII 68 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 QE+ S + + + + + ++ T AIA + + Sbjct: 69 GFQEVFSIDNLKTLLLEAGYP-YFETIDTPIVEGDFIYRSPVVAIASKFPILEASAVEAE 127 Query: 130 LLGAKDSFSRA--GNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 A+ +R+ + ++I +V + K F D L T +P+ + L Sbjct: 128 SEAAQLMGWNKFDFSRKPLRATIDIPHIGATDCYVTHLKSKRSLFDDPLPETITPADTAL 187 Query: 185 SQQAQW-LKDW-----------------ITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 S + L +W + +++++ P ++ GDFN ++ Sbjct: 188 SGFIRQRLGNWGSAMQRGSEAALLQLAMVKRREQTQYPMILFGDFNDTLSSSCLEQLVAS 247 Query: 227 TI------------------DPNDSLIRFPKEKDSRCN-ANKNLRNKIPIDYFVMDQNAY 267 ++ D + + + +DY ++ Q Sbjct: 248 SVFGMSDSEIERLIHFYCLYDGWELFTSVNDDTSQPRPATHYYNGKGSVLDYILLSQEFN 307 Query: 268 KFLIQESFSEILYNEDD------IKSRGKRLSDHC-PISIDYD 303 + F Y+ +D +DH PI + Sbjct: 308 AGYLGSLFEVSHYHTEDKHLVNSSFDIDGYSTDHAIPI-VTLS 349 >gi|220922845|ref|YP_002498147.1| exodeoxyribonuclease III Xth [Methylobacterium nodulans ORS 2060] gi|219947452|gb|ACL57844.1| exodeoxyribonuclease III Xth [Methylobacterium nodulans ORS 2060] Length = 269 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 30/306 (9%), Positives = 77/306 (25%), Gaps = 66/306 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + +WNIN L+R++ + D++ LQE N + Sbjct: 3 LTVSTWNIN----------------SVRLRIDLVRRFLDEVRPDVLCLQETKCPNDRFPL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + Q+ +D+ R Sbjct: 47 KELQGF---------GYPHIVFAGQKGYNGVAILSRLPLRSQEVMSFCERQDA------R 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +L G ++ D + + + L+ W + S Sbjct: 92 HISAVLGPEAGAAAGIVLHDFYVPAGGDVPDAALNDKFAHKLAFMDELRAW--GGRRSTS 149 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N + + + + Sbjct: 150 PAILVGDLNVAPLEHDVWSHKQLLDVVSHTPVETERLETLRGEAGWIDTMRHLRPEPEKI 209 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + + + ++ SDH P Sbjct: 210 YTWWSYRSPDWAAADKGRRLDHIWVTPDLAGTVRSVTV-------ARHARAWEKPSDHVP 262 Query: 298 ISIDYD 303 ++++ + Sbjct: 263 VTVELE 268 >gi|186682991|ref|YP_001866187.1| exodeoxyribonuclease III [Nostoc punctiforme PCC 73102] gi|186465443|gb|ACC81244.1| exodeoxyribonuclease III [Nostoc punctiforme PCC 73102] Length = 260 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 87/304 (28%), Gaps = 69/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N + + + N D++ LQE +A Sbjct: 1 MKIATWNVN----------------SIRTRLEQVTDWLTNNPVDVLCLQETKVADA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS-RAGN 142 S + ++ S + +A+ + + S D Sbjct: 41 ------EFPRSPFEQLGYNLYISGQKSYNGVALISRQPLLNVSSGFRAILPDLHHEWDEQ 94 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +R + +++ + ++++++ + + + + Y + L +++ S Sbjct: 95 KRVITGVID----GVRIVNLYVPNGAAVGTEKYEYK------LRWLTALHEYLRVLALSE 144 Query: 203 VPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNA 247 + GDFN + + + I F K N Sbjct: 145 PAICVCGDFNIALEDKDIHEQVSTENHIMATETERQALREILQLGFADAFRKFTTEGGN- 203 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ + Y+ D + + SDH P+ Sbjct: 204 YSWWDYRAAAFRRNLGWRIDHHYLTPVLYERATSCII-------DAEPRKSTQPSDHTPV 256 Query: 299 SIDY 302 +++ Sbjct: 257 IVEF 260 >gi|209883511|ref|YP_002287368.1| exodeoxyribonuclease III xth [Oligotropha carboxidovorans OM5] gi|209871707|gb|ACI91503.1| exodeoxyribonuclease III xth [Oligotropha carboxidovorans OM5] Length = 271 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 76/307 (24%), Gaps = 64/307 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + +WNIN L+ ++ KN D++ LQE + Sbjct: 2 PFTIATWNIN----------------SVRLRIDLVAKFLKNRRPDVLCLQE---TKCIDD 42 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 VFP + RL + + +A+ K + + G D + Sbjct: 43 VFPLKRFQ------RLGYEHIALNGQKGYHGVAIVSKRPFLSKDIRMFCGKVD------S 90 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R E G ++ + D + +P ++D E Sbjct: 91 RHISVAFGESAGLAAPLVLHNFYVPAGGDIPDPALNPKFEHKLSFLDEMRDCTPLHAEDG 150 Query: 203 VPFVIAGDFNRKINYLG--NNDDFWKTID--------------PNDSLIRFPKEKDSRCN 246 ++ GD N + ++ + + + Sbjct: 151 ANHILVGDLNVAPHEHDVWSHRQLLNVVSHTPVECEKLLAVQAQGGWIDVARQRIPMDEK 210 Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ + + +R SDH Sbjct: 211 VYTWWSYRAADWTVGNRGRRLDHIWVSPALGDK-------VRDFRILRDARSWERPSDHV 263 Query: 297 PISIDYD 303 P++ D Sbjct: 264 PVTAVLD 270 >gi|212711404|ref|ZP_03319532.1| hypothetical protein PROVALCAL_02477 [Providencia alcalifaciens DSM 30120] gi|212685860|gb|EEB45388.1| hypothetical protein PROVALCAL_02477 [Providencia alcalifaciens DSM 30120] Length = 297 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 84/287 (29%), Gaps = 45/287 (15%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++ ++NI KN + ++ L + +DAD++ L E+ + A +K Sbjct: 46 SIKVATYNI-----------GKNELAADVANLDELSKAIAKIDADVIVLTEIDNKTARSK 94 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + K + + + K Q L A Sbjct: 95 KVNQLEEIAKANKMDFAF-GKALDFDGGEYGVGILSKYKIEKSQVVNLPSGG-----AEQ 148 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + G ++ + + ++ Q + + D E+ Sbjct: 149 RVVLLSQITKPGFDSPIIIMGTHL---------DWQKDPTIRIGQVRHILDATIGDTETG 199 Query: 203 VPFV------IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + +AGDFN I+ ++K + I Sbjct: 200 FDNIAASIKILAGDFNSTAKEQP--------IEEISYFWNPVEKKGVNYRTWPAVNPAID 251 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID+ + + + D + ++SDH P+ + + Sbjct: 252 IDHIFTYKGQVWDVKN-----MTIPTDSKDFQWSKVSDHLPVIAELE 293 >gi|288574052|ref|ZP_06392409.1| Endonuclease/exonuclease/phosphatase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569793|gb|EFC91350.1| Endonuclease/exonuclease/phosphatase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 341 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 88/309 (28%), Gaps = 38/309 (12%) Query: 2 IRKYV--LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 +R++ + L L A+ A + + ++NI + + D + L + Sbjct: 1 MRRFTKKVILGALLAVIWAAQAPALVIGTFNIEYFNVSG-------KKAYSQEDCSYLAR 53 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 K D D++ LQE+ + K YS + + Sbjct: 54 LIKESDVDLLALQEIEGDATMRFFVTKFLPGWAYSGNDTGGRQDLYFLWRKDSVRILDGP 113 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK--SFCFLDSLENTY 177 V S+ G + L +E ++ ++++HLK S D + Sbjct: 114 VVYGANGSFRFEGKSYRLHDRPPMVGLFLDIE-GDRRFHMVNVHLKSQSTRGKDDQDRAK 172 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + Q + + K P I GD+N +D Sbjct: 173 RYNDFKRGAQIDGINGIVGSLKG---PVFILGDYNV-----------------DDPKGTN 212 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-S-DH 295 + K +DY +S+ KR S DH Sbjct: 213 FPLLSLPKGSYSYDDRKSRLDYI----GYLGIEKSDSWRLFEVETSIPARSTKRSQSPDH 268 Query: 296 CPISIDYDF 304 + +D ++ Sbjct: 269 DMVLLDLNW 277 >gi|239927938|ref|ZP_04684891.1| exonuclease [Streptomyces ghanaensis ATCC 14672] gi|291436275|ref|ZP_06575665.1| exonuclease [Streptomyces ghanaensis ATCC 14672] gi|291339170|gb|EFE66126.1| exonuclease [Streptomyces ghanaensis ATCC 14672] Length = 259 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 79/303 (26%), Gaps = 68/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N T+ L + ++ D++ LQE Sbjct: 1 MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCLQEAKVAED---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + R + + + +A+ + L G R Sbjct: 41 ------RFPFEELRELGYESAVNATGRWNGVALLSRVGLEDVVKG-LPGDPGYEGSEEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + V +++ + +D Y Q + LK + Sbjct: 94 A-----VSATCGPVRVWSVYVPNGREVDHPHYAYK------LQWFEALKAAVAGDAAGER 142 Query: 204 PFVIAGDFNRKINYLGNND-DFWKTIDPNDSLIRFPKEKDSRC-------------NANK 249 PF + GD+N D ++ + R + Sbjct: 143 PFAVLGDYNVAPTDDDVYDRAAFEGLTHVTPAERAALASLRETGLSDIVPRPLKYEHPFT 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID + K + D + +GK SDH P+ + Sbjct: 203 YWDYRQLCFPKNRGMRIDLVYGNAPFAKAVTDSYV-------DREERKGKGASDHAPVVV 255 Query: 301 DYD 303 D D Sbjct: 256 DLD 258 >gi|168182409|ref|ZP_02617073.1| exodeoxyribonuclease III [Clostridium botulinum Bf] gi|182674470|gb|EDT86431.1| exodeoxyribonuclease III [Clostridium botulinum Bf] Length = 253 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 82/304 (26%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ SWN+N L + ++ DI+ +QE + Sbjct: 1 MRIYSWNVNGLRAVAKKNF---------------IEWIGEESPDILCIQETKLQENQLED 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + ++S + ++ +A K + + + DS R Sbjct: 46 NIKNIDGYYSYFS----------FAAKKGYSGVATYTKVKPISVKHSIGIEKFDSEGRI- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + K +L+I+ + + + L ++ + + Sbjct: 95 --------LITEFKDFTLLNIYFPNGQRDEER-------LQYKLDFYEALFNYCDELVKE 139 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKT-------IDPNDSLIRFPKEKDSRCNA------- 247 VI GD+N N + + I+ + + Sbjct: 140 GKKLVICGDYNTAHNEIDLKNPKANEKTSGFLRIERDWLDKIIERGYTDTFRNMNPDKIK 199 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY + N + +Y SDHCPI Sbjct: 200 YSWWSYRFKARERNAGWRIDYHFVSNNLLDRVENTEILNEVY-----------GSDHCPI 248 Query: 299 SIDY 302 ++ Sbjct: 249 MLEL 252 >gi|160889855|ref|ZP_02070858.1| hypothetical protein BACUNI_02286 [Bacteroides uniformis ATCC 8492] gi|156860847|gb|EDO54278.1| hypothetical protein BACUNI_02286 [Bacteroides uniformis ATCC 8492] Length = 361 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 87/305 (28%), Gaps = 62/305 (20%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + +++ ++NI+ + T + +Y + D++ QE G Sbjct: 98 TPAGKYLKIATYNIHNFGG-----------EITGYSCKEIARYMQQEGVDVLCFQEFGDN 146 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + FP ++ S DS V+ + YPL + Sbjct: 147 SD----FPTDSIRRVLSHWSHALIPSEDS---------VKGVLPIAVFSRYPLANHRFIT 193 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP---SCSLLSQQA------ 188 + + ++ V + I +++ HL++ + QA Sbjct: 194 YQHSSNCSMMCDVVMGTDTIRLINNHLQTTSVSQKRRKWERELATDDTRREVQAAKDAAG 253 Query: 189 --------QWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + ++ P ++ GDFN + + KT+ F Sbjct: 254 TLHENFMKRATQTYVISHYAKTSPYPVLLCGDFNSIPSSYTYHH-LRKTLKDG-----FR 307 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + + IDY + + SDH P+ Sbjct: 308 TAGNGYMYTYRYAKRMLRIDYIFHSPSLK-------------GIEYYSPDLDLCSDHNPV 354 Query: 299 SIDYD 303 ++ + Sbjct: 355 IMEVE 359 >gi|301383299|ref|ZP_07231717.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato Max13] gi|302063704|ref|ZP_07255245.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato K40] Length = 382 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 45/343 (13%), Positives = 103/343 (30%), Gaps = 75/343 (21%) Query: 11 FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53 C+ +V Q +++++WNI L+ + + + + Sbjct: 52 LLTASCSTAVQAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTPEDLAYN 111 Query: 54 YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99 + + ++ DIV LQ + +A ++P +T ++ E + Sbjct: 112 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYQDQQKLLQERLADLYPCSTQAFYWKAEFVP 171 Query: 100 -NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKK 156 H + T + LQ P+ A + + A+ + +G K Sbjct: 172 SPHIWGSVGRKLTTLSRFHIDSAERLQLPVPVPDANIISRQFQPKNALLVSYLPLRDGGK 231 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI- 215 + V++ HL + D +Q ++ + + + P++I GDFN Sbjct: 232 LAVINTHLATAKPGDG----------TAHEQIAATENLLDKLEGGGTPWLIGGDFNLLPL 281 Query: 216 -----------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-KNLRNKIPI------ 257 + + + + + + + + + N I Sbjct: 282 GQYQRLPEQQRHGYAADSELHALWEKYPMIPNNTESSGTDRSQWLTHFPNDSRINGPDRT 341 Query: 258 -DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 DY + + S + +SDH P+ Sbjct: 342 VDYLFYSPSLKR----VSARVRRDDTLL-------ISDHLPVI 373 >gi|170728213|ref|YP_001762239.1| endonuclease/exonuclease/phosphatase [Shewanella woodyi ATCC 51908] gi|169813560|gb|ACA88144.1| Endonuclease/exonuclease/phosphatase [Shewanella woodyi ATCC 51908] Length = 894 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 46/387 (11%), Positives = 97/387 (25%), Gaps = 101/387 (26%) Query: 19 SVAQKVRLVSWNINTLSEQE---GVSLWKNSVKRTTSD------------------YTLL 57 + +R+ S+N+ L + G L + +D T + Sbjct: 471 ATQGDIRVASFNVLNLFTSDSDIGGPLNPMCKDQADADASRGCGRGAHSLEDYLLQRTKI 530 Query: 58 RQYAKNLDADIVFLQEMGSY------------NAVAKVFPKNTWCIFYSTERLINHSKRD 105 K ++AD++ L E+ + NA+ P F + Sbjct: 531 VNAIKEMNADVIGLMEIENNGFSEHSSIQYLLNAINAELPAADAYAFIEVNDADKYKGEF 590 Query: 106 SNND-IHTAIAVRKKNVR------------------VLQQSYPLLGAKDSFSRAGNRRAV 146 +D I + R V+ V + + R ++ Sbjct: 591 IGSDAITVGLLYRPSTVKPTGDAFVIATPEQHSVAGVATRDNNGTVEESPSYDKYQRHSL 650 Query: 147 ELLVEINGKKIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWI 195 +I+ +K+ V+ HLKS + A+ L + + Sbjct: 651 AQTFQIHDEKLTVVVNHLKSKGSGCLEDWLEFSESKDPADLQGKCNEFRVSAAKVLGESL 710 Query: 196 TQKKES------------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN------------ 231 + P + D++ W T++ Sbjct: 711 KDVEGGLLVIGDMNAYGMEDPVAVLTDYDASTAKREIVTASWTTLNGEVYEREGSKIDKG 770 Query: 232 -DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + +D+ + + L+ I E D+ Sbjct: 771 YGLVNLNTQAHGPATFGYSYSGELGNLDHALANTQVADKLVGIEDWNINSVESDLFEYPS 830 Query: 291 RL-------------SDHCPISIDYDF 304 + SDH P+ I ++ Sbjct: 831 KYSGDLAKSENAFSSSDHDPVIIALEY 857 >gi|260436042|ref|ZP_05790012.1| exodeoxyribonuclease III [Synechococcus sp. WH 8109] gi|260413916|gb|EEX07212.1| exodeoxyribonuclease III [Synechococcus sp. WH 8109] Length = 288 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 32/315 (10%), Positives = 87/315 (27%), Gaps = 63/315 (20%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++ + V++ +WN+N + + + ++ D++ LQ Sbjct: 1 MLRVFDATGSAVQIATWNVN----------------SVRTRLDQVLSWLESEQPDLLCLQ 44 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E + + + + +A+ + + Sbjct: 45 ETKVDDPL----------FPLEAFKSAGWHVHIHGQKAYNGVALISREPLEDVRCGFAGE 94 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + A + ++ + VL++++ + L S + Y + LK Sbjct: 95 LPNDAEANDL-GAQKRVISAMLNGVRVLNLYVPNGSSLKSEKYPYKLA------WLGCLK 147 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGN------------NDDFWKTIDP--NDSLIRFP 238 ++ +++ P + GDFN + +D + + + L Sbjct: 148 RYLDAQEQRGEPLCMVGDFNIGLEARDLPDPDRQTGGIMASDAERQALRDALGERLQDVF 207 Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + + ID+ + Sbjct: 208 RVFEPDSGHWSWWDYRSGAWDRDRGWRIDHVYLCDELLGLARSCVIH-------KRMRGN 260 Query: 290 KRLSDHCPISIDYDF 304 ++ SDH P+S+ D+ Sbjct: 261 QQPSDHAPVSVVVDW 275 >gi|258626823|ref|ZP_05721630.1| exodeoxyribonuclease III [Vibrio mimicus VM603] gi|258580870|gb|EEW05812.1| exodeoxyribonuclease III [Vibrio mimicus VM603] Length = 268 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 82/311 (26%), Gaps = 76/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++S+NIN L + L+ D++ LQE + Sbjct: 1 MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEAFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +++ H +A+ K V + G Sbjct: 45 QEVEAMGYQVYFH------------GQKAHYGVAILCKQTPVEV----IKGFPTDSEEHQ 88 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + +G K +L+ F + Q + L ++ + + + Sbjct: 89 KRMIMATFADEDGNKTTILN-----GYFPQGDNVEHETKFPYKRQFYRDLMTYLREHRSN 143 Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240 V+ GD N ++ ++ +T+ + F + Sbjct: 144 TERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSFQPEEREWLQTLMDWGLVDTFRQL 203 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + + + D + Sbjct: 204 HPEVSDQFSWFDYRSRGFDDNRGLRIDVILATPTLAETCQEAGI-------DYELRGIDK 256 Query: 292 LSDHCPISIDY 302 SDH PI + Sbjct: 257 PSDHAPIWAIF 267 >gi|301308230|ref|ZP_07214184.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] gi|300833700|gb|EFK64316.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] Length = 365 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 96/334 (28%), Gaps = 78/334 (23%) Query: 4 KYVLALVFFLVPCTASV--------------AQKVRLVSWNINTLSEQEGVSLWKNSVKR 49 K++L +F + C V + ++++++N+ + + N Sbjct: 68 KFLLIGIFSFLLCWGPVKRYFPFHSHKDVPREEVLKVLTYNVMAFGYKNHTKIAPN---- 123 Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 + QY N DADIV LQE + + + + S + + S Sbjct: 124 ------KIIQYIANSDADIVCLQEYATAKSEKSLTASKIYDA-LSMYPYRSVFYQSSTKF 176 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 IAV K + + + V I GKK+ +++ HL+SF Sbjct: 177 QSFGIAVFSKYPLSNSRMVKYDSDYN--------GSSVHEVNIKGKKLTLINNHLESFKL 228 Query: 170 LDSLENTYS-----------------------PSCSLLSQQAQWLKDWITQKKESLVPFV 206 YS P+ + ++QA+ + + I + Sbjct: 229 TMEDRTRYSSLIKSFSSDGLDDLKGAFEQKLGPAFRIRAKQAEAVSEEIKN--AKGDYVL 286 Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 + GDFN + D + F + ID + N Sbjct: 287 VCGDFNDTPISYAHRTI------QGDLMDAFAESGRGMGITYNQNFFWFRIDNILHSPNM 340 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + SDH P+ Sbjct: 341 TSM--------------NCSVDKVAYSDHYPLWC 360 >gi|229098205|ref|ZP_04229152.1| Exodeoxyribonuclease [Bacillus cereus Rock3-29] gi|228685103|gb|EEL39034.1| Exodeoxyribonuclease [Bacillus cereus Rock3-29] Length = 252 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 86/305 (28%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + +Y + +ADI LQE+ + + Sbjct: 1 MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQSGQIDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ + + + ++ A+ K + + D R Sbjct: 47 NPEGYYTYW-----------NYAVKKGYSGTAIFMKKEPLSVTYGLGIEEHDQEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + + L + Sbjct: 92 -----VITLEFEDFYMITLYTPNSKRGLERLDYRMEWEDDFRTYIKQL--------DEKK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V GD N + + + I + + ++ A Sbjct: 139 PVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTRILEEGFVDTYRHLYPNQEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV+ + + D + SDHCP+ Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERIKGQI-----------TDAKINSEIMGSDHCPVE 247 Query: 300 IDYDF 304 + +F Sbjct: 248 LHINF 252 >gi|196006481|ref|XP_002113107.1| hypothetical protein TRIADDRAFT_25440 [Trichoplax adhaerens] gi|190585148|gb|EDV25217.1| hypothetical protein TRIADDRAFT_25440 [Trichoplax adhaerens] Length = 273 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 38/299 (12%), Positives = 91/299 (30%), Gaps = 37/299 (12%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 + A+ A KV++ ++NI TL + L + + D+ + Sbjct: 2 LAIFSLAAEAGKVKIAAFNIQTLGKT---------KMGKQEVVAELVKILRRY--DLTLI 50 Query: 72 QEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 QE+ + A+ + + YS +++ S+ A R V + Sbjct: 51 QEIRDSSGVAIQTLLDEVNKGHSYSYAMILSDRLGRSSYKEQYAFFYRTDLFSVQGNYHY 110 Query: 130 LLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 G + + + R + +I GK+ ++ H ++ Sbjct: 111 DDGDESAGDDSFIREPFVVKFKITATGKQFVLIPCHASPSYAVEET-------------- 156 Query: 188 AQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 L D ++ GDFN +Y+ +++ + + Sbjct: 157 -DALADVYDDATTRFGESNAILMGDFNADCSYISSSEWSYVRLWTQSRFNWVIGSNADTT 215 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK--RLSDHCPISIDY 302 + N + + + + ++ + S + +SDH P+ ++ Sbjct: 216 TKSTNCAYD-RL--VLAGSRMQSDYVSGTAKVFRFDSEYGLSYDETTAVSDHYPVEMEL 271 >gi|159044435|ref|YP_001533229.1| putative Exodeoxyribonuclease III [Dinoroseobacter shibae DFL 12] gi|157912195|gb|ABV93628.1| putative Exodeoxyribonuclease III [Dinoroseobacter shibae DFL 12] Length = 259 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 38/300 (12%), Positives = 79/300 (26%), Gaps = 68/300 (22%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + ++NIN + L + + D+V LQE+ S +A Sbjct: 3 IATFNING----------------IKARINALPDWLREASPDVVVLQEIKSVDAA----- 41 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + ++ +A+ K D +R Sbjct: 42 -----FPRELFEDMGYTVETHGQKSFNGVAILSKLPLEDVTRGLPGDDGDEQARW----- 91 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 +E V + + V ++L + + Y + LK + + P Sbjct: 92 IEATV-MGDVPVRVCGLYLPNGNPAPGPKYDYKLA------WMARLKTRAAELLAAEEPA 144 Query: 206 VIAGDFNRKI---NYLGNNDDFWKTIDP-----------NDSLIRFPKEKDSRCNANKNL 251 ++AGD+N + + N + + Sbjct: 145 LMAGDYNIIPLDEDAARPEAWRKDALALPASRAAFREILNLGFTDAFRTRVPGPGHYSFW 204 Query: 252 RNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ +M + + D G++ SDH P+ +D Sbjct: 205 DYQAGAWQRNDGIRIDHILMTPDCADLMRDC-------RIDAAVRGGEKPSDHVPVVVDL 257 >gi|326775772|ref|ZP_08235037.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus XylebKG-1] gi|326656105|gb|EGE40951.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus XylebKG-1] Length = 801 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 42/327 (12%), Positives = 79/327 (24%), Gaps = 69/327 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ--YAKNLDADIVFLQEMGSYNA 79 ++ + ++N+ L + + + L + DIV L+E+ N Sbjct: 491 DELAVATYNVENLDAGDD-----------QAKFDTLAEGVAVNLSSPDIVSLEEIQDDNG 539 Query: 80 V-----------------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 A V + N + +I + V Sbjct: 540 AVNDGTTGSEATLKRFTDAIVAQGGPRYAWRYIAPENNKDGGEPGGNIRNVFLFNPQRVS 599 Query: 123 ---------------------VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 V + P S + A +R+ + G+ ++V+ Sbjct: 600 FTDRAGGDATTPVEAVKTWKGVRLSASPGRINPASPAWADSRKPLVGEFVFRGEPVFVIG 659 Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKI 215 H S L Y S + QQA + ++T ++ V GDFN Sbjct: 660 NHFASKGGDQPLHGRYQEPTRSSETKRIQQAAEVNTFVTAVLKADRSAKVVALGDFNDFE 719 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 S + N +D+ + Sbjct: 720 FSPT----MKTLTRGRALKPLITTLPPSERYSYVFDGNSQTLDHILTSPGVR-------- 767 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P + Sbjct: 768 RPDYDVVHINAEFADQASDHDPQVVRI 794 >gi|260642592|ref|ZP_05416508.2| endonuclease/Exonuclease/phosphatase family protein [Bacteroides finegoldii DSM 17565] gi|260621395|gb|EEX44266.1| endonuclease/Exonuclease/phosphatase family protein [Bacteroides finegoldii DSM 17565] Length = 379 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 42/369 (11%), Positives = 92/369 (24%), Gaps = 84/369 (22%) Query: 3 RKYVLALVFFLVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKN-----------SVKR 49 R V L+F + + + + R+ WN L + SL + + R Sbjct: 23 RVAVTILLFVICSWSVPAQENIQFRVACWNTENLFDTRHDSLKNDYEFLPNAIRHWNYNR 82 Query: 50 TTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKV-----FPKNTWCIFYSTERLIN 100 + + + + ++ L E+ + + + + + + + Sbjct: 83 YKKKLSDIARVITAIGEWNPPALIGLCEVENDTVLRDLTRRSPLQELDYRYVMTDSPDL- 141 Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWV 159 I A+ ++ ++L + R + + + + G + V Sbjct: 142 -------RGIDVALIYQRDLFKLLSSRS--ISIPVFRQHRPTRDLLHVNGLLLTGDTLDV 192 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINY 217 HL S S AQ L+ + + +I GDFN N Sbjct: 193 FVCHLPSRSGG------AKESEPYRLHAAQILRTEVDSVLHTRLHPQVIIMGDFNDYPNN 246 Query: 218 LGNNDDFWKT---------------------IDPNDSLIRFPKEKD-SRCNANKNLRNKI 255 + P ++ + + K Sbjct: 247 KSIRKILEAEAPPIRSDSLDIAIHPATSPSSLSPLKLYHLLARKAKTANFGSYKYHGEWG 306 Query: 256 PIDYFVMDQNAYKFLIQESFSE---------------------ILYNEDDIKSRGKRLSD 294 +D+ ++ E + SD Sbjct: 307 LLDHLIVSGTLLNTSGNFFTHEEKAKVCQLPFLLTDDKKYGGKEPFRTYKGMKYQGGFSD 366 Query: 295 HCPISIDYD 303 H PI D++ Sbjct: 367 HLPIYTDFE 375 >gi|256824866|ref|YP_003148826.1| exodeoxyribonuclease III [Kytococcus sedentarius DSM 20547] gi|256688259|gb|ACV06061.1| exodeoxyribonuclease III [Kytococcus sedentarius DSM 20547] Length = 307 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 43/327 (13%), Positives = 80/327 (24%), Gaps = 70/327 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ S+N+N + + + D+V LQE+ ++ Sbjct: 1 MRIASFNVNGIRACQTRGFE---------------HWLARRQPDVVSLQEVRCPVSLLPS 45 Query: 84 FPKNTWCIFYSTERLINHSK------RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + Y + V ++ A + Sbjct: 46 GVFGEYHLSYDPGDRAGRNGVAVLTREAPAAVRTFGAPVLRRAPGEEHTELTEPDAGPTL 105 Query: 138 SRAGNRRA---VELLVEINGKKIWVLDIHLKSFCFL--------------DSLENTYSPS 180 R A + V++ + V ++L Y Sbjct: 106 PRELKEFAGEGRYIEVDLADAPVTVASLYLPKGGLPADLQEKMAKRMREAPDGGAKYDRK 165 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGNNDDF 224 L+ A+ L + FV+ GDFN + F Sbjct: 166 MRFLAGFAKQLDRSRKAAAAAGREFVVMGDFNVAHTERDVKNWRGNKNSEGFLPSEREWF 225 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESF 275 + P + + IDY + + + Sbjct: 226 GSILSPRTLVDVVRSQYPDTDGPYAWWSWMGQAFERDTGWRIDYHLATPTLARSVESAGV 285 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 D SR +RLSDH P+ +DY Sbjct: 286 -------DKEPSRAERLSDHAPVVVDY 305 >gi|182435135|ref|YP_001822854.1| putative endonuclease/exonuclease/phosphatase family protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463651|dbj|BAG18171.1| putative endonuclease/exonuclease/phosphatase family protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 781 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 42/327 (12%), Positives = 79/327 (24%), Gaps = 69/327 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ--YAKNLDADIVFLQEMGSYNA 79 ++ + ++N+ L + + + L + DIV L+E+ N Sbjct: 471 DELAVATYNVENLDAGDD-----------QAKFDTLAEGVAVNLSSPDIVSLEEIQDDNG 519 Query: 80 V-----------------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 A V + N + +I + V Sbjct: 520 AVNDGTTGSEATLKRFTDAIVAQGGPRYAWRYIAPENNKDGGEPGGNIRNVFLFNPQRVS 579 Query: 123 ---------------------VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 V + P S + A +R+ + G+ ++V+ Sbjct: 580 FTDRAGGDATTPVEAVKTWKGVRLSASPGRINPASPAWADSRKPLVGEFVFRGEPVFVIG 639 Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKI 215 H S L Y S + QQA + ++T ++ V GDFN Sbjct: 640 NHFASKGGDQPLHGRYQEPTRSSETKRIQQAAEVNTFVTAVLKADRSAKVVALGDFNDFE 699 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 S + N +D+ + Sbjct: 700 FSPT----MKTLTRGRALKPLITTLPPSERYSYVFDGNSQTLDHILTSPGVR-------- 747 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P + Sbjct: 748 RPDYDVVHINAEFADQASDHDPQVVRI 774 >gi|184199810|ref|YP_001854017.1| exodeoxyribonuclease III [Kocuria rhizophila DC2201] gi|183580040|dbj|BAG28511.1| exodeoxyribonuclease III [Kocuria rhizophila DC2201] Length = 268 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 80/309 (25%), Gaps = 70/309 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + + D D++ +QE + + Sbjct: 1 MRIATWNVN----------------SIRARADRIEAWLDRSDVDVLAIQETKAKDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + Q + +F + G Sbjct: 41 ------NFPWELFEFAGYEVAHFGVNQWNGVAIASRVGLTDVQRT--FPDQPTFGKPGQE 92 Query: 144 RAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KE 200 A E + + V +++ + LD Y + + L+ Q ++ Sbjct: 93 PAQEARAIGATCGGVRVWSLYVPNGRGLDDPHMPYK------LEWLRVLEGHAKQWLQED 146 Query: 201 SLVPFVIAGDFNRKINYLG-----------------NNDDFWKTIDPNDSLIRFPKEKDS 243 + GD+N + + + + Sbjct: 147 PDAQIALVGDWNVAPQDDDVWDIQLFKEGGYTHVSEPERAAFHAFIEDAGYQDVVRPRHP 206 Query: 244 RCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 K ID+ + + D + +GK SD Sbjct: 207 GPGVYTYWDYKQLRFPKKEGMRIDFQLCSPALAARVQDAWI-------DRDERKGKGASD 259 Query: 295 HCPISIDYD 303 H P+ I+ D Sbjct: 260 HAPVVIEID 268 >gi|149374747|ref|ZP_01892520.1| exonuclease III [Marinobacter algicola DG893] gi|149360636|gb|EDM49087.1| exonuclease III [Marinobacter algicola DG893] Length = 270 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 32/286 (11%), Positives = 69/286 (24%), Gaps = 63/286 (22%) Query: 51 TSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108 + L +L+ D + LQE + + + + + Sbjct: 12 RTRLHQLEAVIDSLNPDFIGLQETKVTDEEFPEDAIRELGYHVHFH------------GQ 59 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 H +A+ + Q + S RR + +NG+K+ V++ Sbjct: 60 KTHYGVALLSRQAPDSVQKGYPWDGEGS-----QRRLITGHFTVNGRKLTVIN-----GY 109 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL---------- 218 F + + L ++ + K + V+ GD N Sbjct: 110 FPQGESRDHPVKFPAKEKFYADLMRYLDELKAANGEIVVMGDMNISPTDQDIGIGADNAK 169 Query: 219 -----------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----------P 256 ++ ++ F + + Sbjct: 170 RWLRTGKCSFLPEEREWLGQVESRGFTDVFRHLHPEESDTFSWFDYRSKGFDRDPRRGLR 229 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID + + +R SDHCP+ + Sbjct: 230 IDLIMASDPLLPKAEEAGV-------SYDIRAMERPSDHCPVWARF 268 >gi|254420197|ref|ZP_05033921.1| exodeoxyribonuclease III [Brevundimonas sp. BAL3] gi|196186374|gb|EDX81350.1| exodeoxyribonuclease III [Brevundimonas sp. BAL3] Length = 265 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 76/304 (25%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + + + D+ QE+ + Sbjct: 1 MRIATWNVN----------------SVNARLPTVLAWLEQAAPDVACFQEIKCVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + +A+ K + D +R Sbjct: 41 ------KFPREAFESLGYNVETHGQKSYNGVALLSKYPLSDIRRGLPGDETDEQARY--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E ++E + + V I+L + + + + Y + + L Sbjct: 92 --LEAVIEAP-RPLRVASIYLPNGNPIGTEKFDYKLA------WFERLNRHARDLLAFEE 142 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N ++ + + Sbjct: 143 PLALCGDYNVIPEAEDAKNPAAWTDDALFQPQSRQAFRALKNLGLAD-SHEVGGEPAGTY 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ A L + SDH P+ Sbjct: 202 SFWDYQAGAWQRNHGIRIDFALLSPQAADRLRGV-------ETHRDARDMDKPSDHVPVV 254 Query: 300 IDYD 303 +D D Sbjct: 255 VDID 258 >gi|302131242|ref|ZP_07257232.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 382 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 45/343 (13%), Positives = 103/343 (30%), Gaps = 75/343 (21%) Query: 11 FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53 C+ +V Q +++++WNI L+ + + + + Sbjct: 52 LLTASCSTAVQAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTPEDLAYN 111 Query: 54 YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99 + + ++ DIV LQ + +A ++P +T ++ E + Sbjct: 112 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYQDQQKLLQERLADLYPCSTQAFYWKAEFVP 171 Query: 100 -NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKK 156 H + T + LQ P+ A + + A+ + +G K Sbjct: 172 SPHIWGSVGRKLTTLSRFHIDSAERLQLPVPVPDANIISRQFQPKNALLVSYLPLRDGGK 231 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI- 215 + V++ HL + D +Q ++ + + + P++I GDFN Sbjct: 232 LAVINTHLATAKPGDG----------TAHEQIAATENLLDKLEGGGTPWLIGGDFNLLPL 281 Query: 216 -----------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-KNLRNKIPI------ 257 + + + + + + + + + N I Sbjct: 282 GQYQRLPEQQRHGYAADSELHALWEKYPMIPNNTESSGTDRSQWLTHFPNASRINGPDRT 341 Query: 258 -DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 DY + + S + +SDH P+ Sbjct: 342 VDYLFYSPSLKR----VSARV-------RRDDTLLISDHLPVI 373 >gi|167581292|ref|ZP_02374166.1| exodeoxyribonuclease III [Burkholderia thailandensis TXDOH] Length = 258 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 84/304 (27%), Gaps = 72/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ +WN+N+L+ + + D D++ LQE + Sbjct: 1 MRIATWNVNSLN----------------VRKQHVLDWLAQSDVDVLCLQELKIPDEKFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +++ ++ N AI R + F Sbjct: 45 EALEAAGYRSWFAGQKTYN----------GVAILARASLPFDETDVVRNIPG---FEDTQ 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + ++ + ++ + + LDS + Y Q L+ W+ + + Sbjct: 92 QR-LIAATID----GVRIVSAYFPNGQALDSDKFVYK------MQWLDALQAWLKNELQR 140 Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNA 247 + GD+N +D + P + + D Sbjct: 141 YPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLVALGFVDAFRRFDQPEKT 200 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ++ ID+ ++ + + D ++ SDH P+ Sbjct: 201 FTWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTV-------DRAPRAWEQPSDHTPV 253 Query: 299 SIDY 302 Sbjct: 254 VAQL 257 >gi|72383653|ref|YP_293008.1| exodeoxyribonuclease III [Prochlorococcus marinus str. NATL2A] gi|72003503|gb|AAZ59305.1| Exodeoxyribonuclease III [Prochlorococcus marinus str. NATL2A] Length = 275 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 30/302 (9%), Positives = 86/302 (28%), Gaps = 63/302 (20%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + +WN+N S ++++ DI+ LQE + + Sbjct: 3 VATWNVN----------------SIRSRIDHVKEWLITNKIDILCLQETKTEDKF----- 41 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + S + +A+ + + D + Sbjct: 42 -----FPIEIFSDLGYEVSISGQKSYNGVAIISRFPINDIKIGFNEVTNDYQDLSILSEQ 96 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + + + I ++++++ + ++S + Y + L+ ++ + ++ P Sbjct: 97 KRI-ISADINDIRIINVYVPNGSSINSDKFIYKKK------WLKCLQVYLREINKNNTPI 149 Query: 206 VIAGDFNRKINYLGNNDDFW------------KTIDP--NDSLIRFPKEKDSRCNANKNL 251 + GDFN + + + L + + Sbjct: 150 CLLGDFNIAPEDRDIHTPSRYEESIMASSKERELLKDALGGELEDVFRIFEPGEKNWSWW 209 Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ + ++ D + ++ SDH P+ +D Sbjct: 210 DYRHSAWERDKGWRIDHIYLTEDILSCANSCWI-------DKEQRSREKPSDHAPVVVDI 262 Query: 303 DF 304 ++ Sbjct: 263 NW 264 >gi|238027065|ref|YP_002911296.1| endonuclease/exonuclease/phosphatase [Burkholderia glumae BGR1] gi|237876259|gb|ACR28592.1| Endonuclease/exonuclease/phosphatase [Burkholderia glumae BGR1] Length = 285 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 84/306 (27%), Gaps = 50/306 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 +RL+ WNI + G + RT + L + D+ +QE+ Sbjct: 1 MRLIDWNIQWGRDASGRVE----LARTVAQARALADF------DVWCVQELTRGFAALPG 50 Query: 75 -GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + A++ + A+ + + L Sbjct: 51 GPGPDQFAELAALLPGYTVIEAIAVDLPPAAGGVARRQFGNAIATRLPVGRVLRHMLPWP 110 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 ++ + + R A+E+ + G + ++ HL+ + + + ++A Sbjct: 111 AEAGTPSMPRIALEVNLCGAGGPLRIVTTHLEFYSA--AQRLAQVDALREQHREAAGHAH 168 Query: 194 WITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + PF ++ GDFN D + + + + Sbjct: 169 RPAPAETPDGPFAGSARALDAIVCGDFNSAYRDDAYRRITAPIAGAPDLVDAWVQAHPGQ 228 Query: 245 CNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + D+ + K +++ R SDH Sbjct: 229 TPPPTAGVYDTEQWQDGAMTCDFVFVTDTLAKRIVRCEI-----------DGATRASDHQ 277 Query: 297 PISIDY 302 PI ++ Sbjct: 278 PILLEL 283 >gi|73538157|ref|YP_298524.1| endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134] gi|72121494|gb|AAZ63680.1| Endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134] Length = 653 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 49/323 (15%), Positives = 99/323 (30%), Gaps = 48/323 (14%) Query: 19 SVAQKVRLVSWNI----NTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVF 70 + VR+ ++N+ N + G + N R T+++ L LDAD++ Sbjct: 284 TGGTDVRVAAFNVLNYFNGNGQGGGFNAPDNRGARNTAEFDRQEAKLLAALHALDADVIG 343 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVRVLQQSYP 129 L E+ + + + R ++ D I A+ ++ V+ P Sbjct: 344 LMEVENNGYGPHSAVQRLAALMGPGWRAVDPGTPRLGTDAIAVALLYNQRAVK------P 397 Query: 130 LLGAKDSFSRAGNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTYSP------S 180 + + NR+ + ++ G + V+ HLKS D+ Sbjct: 398 VGMPATTVLDMRNRQPLAQTFQLIGNLSQTFTVVVNHLKSKGCADADGTDRDQGDGQGCW 457 Query: 181 CSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + S+ A+ L DW+ + ++ GD N + + Sbjct: 458 NATRSRAARALADWLGTSPTGVANAGKLVIGDLNSYASEDP-----LTVLAREGYEDIVA 512 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR---------- 288 + +DY + D + S + +E + Sbjct: 513 RFAGRDAYTYVFDGRAGYLDYALADAALVPRIRAVSIWHVNADEPVAFAYAQAYRNAAQQ 572 Query: 289 -------GKRLSDHCPISIDYDF 304 R SDH P+ +D + Sbjct: 573 ERYYAPDAWRASDHDPVLVDLSW 595 >gi|269966663|ref|ZP_06180742.1| hypothetical protein VMC_21720 [Vibrio alginolyticus 40B] gi|269828730|gb|EEZ82985.1| hypothetical protein VMC_21720 [Vibrio alginolyticus 40B] Length = 320 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 105/315 (33%), Gaps = 30/315 (9%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQ 72 T S ++ V+ N+ S+++ + ++ + L+ D++ LQ Sbjct: 2 NTLSQPSRITFVTANLFNFVAPPNAYYDFENIYSLEQWRDKLSWTQRQVEKLEGDVIGLQ 61 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP--- 129 E+ S F + +++T + + AIA R +V + Sbjct: 62 EVFSIEETQAFFSTIGYP-YFATVDTPHVEDEYIYSSPVVAIASRFPIEKVQAVEFDLAT 120 Query: 130 LLGAKDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLDSLENT-------YSPSC 181 L S +R+ + ++ I V HLKS DS + S Sbjct: 121 LEPFGVSVVPEFSRKPIYAQVIHPVLGHIAVYVTHLKSQRPADSEQPETSSTIIGRWLST 180 Query: 182 SLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--------ND 232 +A L+D + + ++ +P V+ GD N+ I + N + Sbjct: 181 QQRGWEAAMLRDAMQKRYRKEPMPTVLMGDMNQPITPISVNSALVSNTGDSVTELQLKDG 240 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------ 286 L++ KD R + + +DY ++ Q + Y + Sbjct: 241 WLLQSAPLKDERPATHYHFSTGNVLDYILLSQEFDTLSDISVAEVVDYQVSNQHLINPIY 300 Query: 287 SRGKRLSDHCPISID 301 R K SDH +++ Sbjct: 301 DRDKNASDHAFVALT 315 >gi|317478865|ref|ZP_07938015.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] gi|316904947|gb|EFV26751.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] Length = 361 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 87/305 (28%), Gaps = 62/305 (20%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + +++ ++NI+ + T + +Y + D++ QE G Sbjct: 98 TPAGKYLKIATYNIHNFGG-----------EITGYSCKEIARYMQQEGVDVLCFQEFGDN 146 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + FP ++ S DS V+ + YPL + Sbjct: 147 SD----FPTDSIRRVLSHWSHALIPSEDS---------VKGVLPIAVFSRYPLANHRFIT 193 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP---SCSLLSQQA------ 188 + + ++ V + I +++ HL++ + QA Sbjct: 194 YQHSSNCSMICDVVMGTDTIRLINNHLQTTSVSQKRRKWERELATDDTRREVQAAKDAAG 253 Query: 189 --------QWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + ++ P ++ GDFN + + KT+ F Sbjct: 254 TLHENFMKRATQTYVISHYAKTSPYPVLLCGDFNSIPSSYTYHH-LRKTLKDG-----FR 307 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + + IDY + + SDH P+ Sbjct: 308 TAGNGYMYTYRYAKRMLRIDYIFHSPSLK-------------GIEYYSPDLDLCSDHNPV 354 Query: 299 SIDYD 303 ++ + Sbjct: 355 IMEVE 359 >gi|294668724|ref|ZP_06733817.1| endonuclease/exonuclease/phosphatase family protein [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309241|gb|EFE50484.1| endonuclease/exonuclease/phosphatase family protein [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 250 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 87/287 (30%), Gaps = 48/287 (16%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + + + ++NI+ S + + Q ++L DI+FLQE+ N + Sbjct: 2 TEPITIATYNIH----------KGMSPLNRKVQISDMAQALESLKPDILFLQEVQGQNLL 51 Query: 81 AKV----FPKNTWCIFYSTE--RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 ++ FP + ++ K H A+ + ++Q+ + Sbjct: 52 RELKLPDFPARPQDNIIADHLAYYTSYGKNAVFPQKHHGNAILSRLPMQMRQNVNI---- 107 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 S +R R + + +G ++ ++ + +Q + ++ Sbjct: 108 -SVNRLEKRGVLHCEILPDGWEMPIVCLCAHLNLL-----------ERDRVKQYVAIFEY 155 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 +T P ++AGDFN + F Sbjct: 156 VTTYIPPEAPLILAGDFND-----WRHKSTLNIGSTLGLTEVFLDRHGELPKTFPARMPV 210 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + +D +IL + + LSDH P+S Sbjct: 211 LSLDRIYTRN-----------LDILNATLHSEEPWQYLSDHLPLSAT 246 >gi|161522526|ref|YP_001585455.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC 17616] gi|189348598|ref|YP_001941794.1| metal-dependent hydrolase [Burkholderia multivorans ATCC 17616] gi|221211889|ref|ZP_03584867.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD1] gi|160346079|gb|ABX19163.1| Endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC 17616] gi|189338736|dbj|BAG47804.1| metal-dependent hydrolase [Burkholderia multivorans ATCC 17616] gi|221167974|gb|EEE00443.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD1] Length = 278 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 40/280 (14%), Positives = 76/280 (27%), Gaps = 56/280 (20%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + +R+ ++NI+ + LDAD++ LQE+ Sbjct: 26 GRDLRIATYNIHG-----------GHGPWHARAVDRIAAVIDELDADVIALQEVPLGGTR 74 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 A + AV + ++ L SF + Sbjct: 75 APDVLAPLRDATGMHVAAGPTIDTA---ERRYGNAVLSRYPIRAARTLDL-----SFHQR 126 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R A++ ++ + V+ HL S S Q Q L + Sbjct: 127 EPRGALDADIDCRTGPLRVVATHLGL-------------SARERSAQVQRL---LAAFDT 170 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 +P ++ GD N + F + + RF + R +D Sbjct: 171 GAMPVILLGDIN---------EWFVRGRALQALVTRFRRAPAPRTFPTVCPLFS--LDRI 219 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ++ +R + SDH P+ Sbjct: 220 WVHPG----------ELLVDVVVHRSARARHASDHYPLVA 249 >gi|150017217|ref|YP_001309471.1| exodeoxyribonuclease III Xth [Clostridium beijerinckii NCIMB 8052] gi|149903682|gb|ABR34515.1| exodeoxyribonuclease III Xth [Clostridium beijerinckii NCIMB 8052] Length = 254 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 80/303 (26%), Gaps = 78/303 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +L+SWN+N L +Y K +DADI +QE Sbjct: 5 KLISWNVNGLRACVKKGF---------------LEYFKEIDADIFCIQESKLQEG-QIDL 48 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + + +++ + + AV K + + + D+ R Sbjct: 49 ELDGYTSYWNYAEKKGY----------SGTAVFTKEEPLTVKRGIGIEEHDNEGR----- 93 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ + ++++++ + + + + + L+ P Sbjct: 94 ----VLTLEYGNFYLVNVYTPNSKQGLERLDYRMVWEDVFRKYLKELEK--------NKP 141 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 +I GD N + + + + Sbjct: 142 VIICGDLNVAHKEIDLKNPTSNRKNAGFTDEERSKISELLEAGFIDTYRYFYPDKEGMYS 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF++ ++ L SDHCP+ + Sbjct: 202 WWSYRFNARANNAGWRIDYFLVSESLKDKLEDAKIH-----------MEVTGSDHCPVEL 250 Query: 301 DYD 303 + Sbjct: 251 TIN 253 >gi|86605184|ref|YP_473947.1| exodeoxyribonuclease III [Synechococcus sp. JA-3-3Ab] gi|86553726|gb|ABC98684.1| exodeoxyribonuclease III [Synechococcus sp. JA-3-3Ab] Length = 261 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 78/301 (25%), Gaps = 68/301 (22%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAKVF 84 + +WN+N + + + + D++ LQE +A Sbjct: 3 VATWNVN----------------SIRTRLPQVLAWLDKQGSLDVLCLQETKVVDA----- 41 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + + +A+ + V + + +R Sbjct: 42 -----EFPRAPFEERGFHVEVYGQKAYNGVALISREVPEKVERGFAALLPAAAELDEQKR 96 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + + I +L++++ + + S + Y + LKD++ + P Sbjct: 97 L----IGGLYRGIRILNLYVPNGEAVGSDKYAYK------LRWLACLKDYLQVALDQGQP 146 Query: 205 FVIAGDFNRKINYLGNNDD--------------FWKTIDPNDSLIRFPKEKDSRCNANKN 250 ++ GDFN D + I F K + Sbjct: 147 ILLCGDFNIAPEDRDIYDPGKAGEIMASEPERQALQKILALGFEDAFRKFNPDPGH-FSW 205 Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + ID+ + R ++ SDH P+ ++ Sbjct: 206 WDYRGGGFQKNRGWRIDHLYLSPLLQDKATACWIDVE-------PRRAEKPSDHAPVVVE 258 Query: 302 Y 302 Sbjct: 259 L 259 >gi|118594091|ref|ZP_01551438.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth [Methylophilales bacterium HTCC2181] gi|118439869|gb|EAV46496.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth [Methylophilales bacterium HTCC2181] Length = 260 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 83/301 (27%), Gaps = 67/301 (22%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 ++ +WN+N+L+ + + K + DI+ LQE N Sbjct: 3 KIATWNVNSLN----------------VRLEHVIDWVKIHNPDILCLQETKQTND----- 41 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + I + + + +A+ FS R Sbjct: 42 -----KFSHEAFDSIGYKSYHNGQKTYNGVAIISNKELQNVG-----SDIPGFSDPQKRI 91 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 L + I V+ ++ + LDS + Y S + W+ Sbjct: 92 IHGLYPSRSLGLIHVVSAYVPNGQSLDSEKFKYKVS------WLEAFNTWVKSSYGKSDH 145 Query: 205 FVIAGDFNRKINYLGNND---DFWKTIDPNDSLIRFPKEKDSRCNA-----------NKN 250 ++ GDFN + +D + F D + Sbjct: 146 HILTGDFNIAPRDIDCHDPEAWKGNILVSQIERDLFDAIIDIGFDDSFRVLNKDIQKFSW 205 Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 ++ ID+ + + + L D+ + +R SDH P+ + Sbjct: 206 WDYRMAGFRRNLGMRIDHILTSHSLKENLTTAYI-------DEDPRKLERPSDHTPVITE 258 Query: 302 Y 302 + Sbjct: 259 F 259 >gi|295395722|ref|ZP_06805913.1| exodeoxyribonuclease III [Brevibacterium mcbrellneri ATCC 49030] gi|294971422|gb|EFG47306.1| exodeoxyribonuclease III [Brevibacterium mcbrellneri ATCC 49030] Length = 261 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 82/303 (27%), Gaps = 68/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+V+WN+N + + + D D++ +QE+ +A Sbjct: 1 MRIVTWNVN----------------SVRARAERIGAFLDRSDVDVLAIQELKCKDA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGN 142 + + +AV + + + + + Sbjct: 41 ------QFPAHVFEDRGYEVAFHGLNQWNGVAVASRVGLDDVEVGFEGVPGFGDDDQVEA 94 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + +++ + LD Y + L++ + E Sbjct: 95 RAISAVT-----GGVRTYSLYVPNGRELDHPHYAYK------LEWLAQLRNEALVRLEQD 143 Query: 203 VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 VPFV+ GDFN + D + + + Sbjct: 144 VPFVMCGDFNVAPLDEDVWDMAAFEGATHVSQPERDAFNGLISAGLTEVTRQFTPGPGVY 203 Query: 248 NKNLRN--------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ + + + D + +GK SDH P+ Sbjct: 204 TFWDYQQLRFPKKQGMRIDFQLASPSLAERATGAFI-------DREERKGKGASDHAPVW 256 Query: 300 IDY 302 +DY Sbjct: 257 VDY 259 >gi|163851383|ref|YP_001639426.1| exodeoxyribonuclease III Xth [Methylobacterium extorquens PA1] gi|163662988|gb|ABY30355.1| exodeoxyribonuclease III Xth [Methylobacterium extorquens PA1] Length = 264 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 81/303 (26%), Gaps = 64/303 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N L + D+V LQE+ +A Sbjct: 1 MRITTWNVN----------------SIKQRVGHLLGFLDEAKPDVVCLQELKCQDA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + +A+ + LQ + L G R Sbjct: 41 ------SFPREEIEAAGYAVETLGQKAYNGVALLVRAP--LQYTQLLRGLPGDAEDEQAR 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 L+ + V I+L + + +Y + L+ + Sbjct: 93 YIEALVHGEGVAPVRVASIYLPNGNPAPGPKYSYKLAFMAR------LRSHARALMTTEE 146 Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 V+AGDFN F + + E + Sbjct: 147 ALVLAGDFNVIPEPEDAADPTVWTQDALFLPETRRAFRALLAEGFTDGLRACEPSAGLYT 206 Query: 248 NK------NLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 RN+ ID+ ++ A L+ S ++ SDH P+++ Sbjct: 207 FWDYQAGCWPRNQGIRIDHLLLSPQAADRLVSASVQRH-------LRGLEKPSDHVPVTV 259 Query: 301 DYD 303 + Sbjct: 260 ELS 262 >gi|42525008|ref|NP_970388.1| exodeoxyribonuclease [Bdellovibrio bacteriovorus HD100] gi|39577219|emb|CAE81042.1| exodeoxyribonuclease [Bdellovibrio bacteriovorus HD100] Length = 257 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 92/305 (30%), Gaps = 76/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 ++++SWN+N L R++ + ADIV LQE+ + A+ K Sbjct: 1 MKMISWNVNGLRS---------------VHRKNFREWFEKEKADIVCLQEIKITDEAIKK 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 ++S+ + ++ +A+ K + + D R Sbjct: 46 DEEFYHPAKYHSSWA-------FAEKAGYSGLALYSKKEPDDVRIGLGIPKFDIEGRW-- 96 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +E + I V++ + + + C+ ++ Q L+ Sbjct: 97 -------LEADFGPITVVNSYWPNSQREHTRLPFKLEFCAAAEKRLQALRK-------KG 142 Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 +I GDFN + +D + + F K + + Sbjct: 143 REVIICGDFNIAHKEIDLRNPKTNMKNAGFLPEERAWMTRFLDKLEWVDSFRKFEQGPEH 202 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +DYF++++ A L S SDHCP Sbjct: 203 -YTWWSYRPGVREKNIGWRLDYFLVNKEASDRLKAASHC-----------PDVMGSDHCP 250 Query: 298 ISIDY 302 + + Sbjct: 251 VRLTL 255 >gi|294011035|ref|YP_003544495.1| putative metal-dependent hydrolase [Sphingobium japonicum UT26S] gi|292674365|dbj|BAI95883.1| putative metal-dependent hydrolase [Sphingobium japonicum UT26S] Length = 248 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 74/285 (25%), Gaps = 55/285 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + VR+ S+NI + + + LDADI+ LQE Sbjct: 15 FAMKTVRVASYNIRKAIGTDRRRVP-----------ERVIDVLNELDADIIALQEADRRF 63 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 V + W + + ++ A+ + + L Sbjct: 64 GV-RSAALPPWLLESISPYRPVPLNVHVDSMGWHGNAILVRKEAEVGAHDVL-----HLP 117 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R A V + + V +HL S +QA + Sbjct: 118 CLEPRGATMAEVTLGKASLRVFGMHLDL-------------SGLWRRKQAAAV--IHAAS 162 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-NANKNLRNKIPI 257 +P V+ GD N + + C + R + Sbjct: 163 SRDAMPTVLMGDLNEWSA------------ERGCLADFARHYSFAPCGRSFHARRPVARL 210 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D + L+ E + ++ SDH PI ++ Sbjct: 211 DRIMHCGRL--KLVDCGVHE--------SAAARKASDHLPIWAEF 245 >gi|259047804|ref|ZP_05738205.1| exodeoxyribonuclease III [Granulicatella adiacens ATCC 49175] gi|259035481|gb|EEW36736.1| exodeoxyribonuclease III [Granulicatella adiacens ATCC 49175] Length = 254 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 87/305 (28%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N R+ + L++Y + DI+ LQE + ++ Sbjct: 1 MKLATWNVNG--------------IRSVLNKGALQEYVLESNPDILCLQETKAQQDQVEL 46 Query: 84 -FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + +F+++ + + A+ K + + + D R Sbjct: 47 GMEFSEYEVFFNSAVKKGY----------SGTAIFTKEKPLSVEYGIGIEEHDQEGR--- 93 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 ++ +K +++ ++ + S + L++ Sbjct: 94 ------VITAEYEKFYLVTVYTPNAKRDLSRLEYRQVWEDDFLAFIKKLEE--------T 139 Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P + GD N + + ND + F A Sbjct: 140 KPVIFCGDLNVAHKEIDLANPKTNTMNAGFTKEERAKFDQVVNNDLVDAFRYLYPDTLGA 199 Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 IDYFV+ Q FL + SDHCP+ Sbjct: 200 YSWWSYMGGARARNVGWRIDYFVISQPLTAFLQEVKIR-----------SDVTGSDHCPV 248 Query: 299 SIDYD 303 + + Sbjct: 249 EMKIE 253 >gi|261821654|ref|YP_003259760.1| endonuclease/exonuclease/phosphatase [Pectobacterium wasabiae WPP163] gi|261605667|gb|ACX88153.1| Endonuclease/exonuclease/phosphatase [Pectobacterium wasabiae WPP163] Length = 300 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 32/290 (11%), Positives = 80/290 (27%), Gaps = 45/290 (15%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++++ ++NI D + + LD DI+ L+E+ Sbjct: 43 APQLKIANYNIAGGLRN------------HKVDLNKVAKAINALDPDIIALEEVDQKTTR 90 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + + ++ + + A+ K + + L Sbjct: 91 SDGIDQIKELAKLTKMYF-SYGVAIQAHGGNYGNAILSKYPIEKTKVFKLPSG-----DY 144 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + + I G V + + + QA+++ + + Sbjct: 145 EQRSLMLSKINIPGFDSPVYIYNTHF---------DWHEEDEVRMSQARFINSIVFDDLD 195 Query: 201 SLVP--------FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 F++AGDFN N + + + + Sbjct: 196 LDKDFPNLATGIFILAGDFNSTKND--------RVVKELNKYWNLVEVAGKDTRTWPAGN 247 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D+ + + + + ++ + + SDH PI Sbjct: 248 PGLDLDHIFTGKGQKWKIEKLTIPNDG--SEEFGIKWQTTSDHIPIMATL 295 >gi|115352233|ref|YP_774072.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria AMMD] gi|115282221|gb|ABI87738.1| Exodeoxyribonuclease III [Burkholderia ambifaria AMMD] Length = 271 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 30/300 (10%), Positives = 81/300 (27%), Gaps = 68/300 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + + D++ LQE Sbjct: 14 MKIATWNVNSLN----------------VRKQHVLDWIAHSGTDVLCLQE---------- 47 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + I + + + +A+ ++ + +S + Sbjct: 48 LKLPDEKYPRADLEAIGYRSWFTGQRTYNGVAILARDTLAVDESDIVRNIPGFDDPQQRV 107 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 AV + + ++ + + +S + Y Q L W++ + + Sbjct: 108 IAVTVE------GVRIVSAYFPNGQSPESDKFVYK------MQWLDALHAWLSAEMQRYP 155 Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249 + GD+N +D + P + + + Sbjct: 156 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAKLLELGFVDAFRRFEQPEKTFT 215 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ D + ++ SDH P+ Sbjct: 216 WWDYRMLAFRRNAGLRIDHILLSPALAANCTSCEV-------DRLPRTWEQPSDHTPVVA 268 >gi|190891414|ref|YP_001977956.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652] gi|218516597|ref|ZP_03513437.1| exodeoxyribonuclease III protein [Rhizobium etli 8C-3] gi|190696693|gb|ACE90778.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652] Length = 263 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 76/303 (25%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N ++ +L ++ K D+V LQE+ + +A Sbjct: 1 MKIATYNVNGING----------------RLDILLRWLKEDAPDVVCLQELKTDDA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ K + L G D +R Sbjct: 41 ------KFPRTETERAGYGAVWHGQRSWNGVAILAKGKTPILTRRGLPGDPDDTH---SR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + F + LS A L + V Sbjct: 92 YIEAAV----DGMLIGCLYLPNGNPFPSAKFEYKLRWFRRLSAYAAELLEI-------EV 140 Query: 204 PFVIAGDFNRKINY---LGNNDDFWKTIDPND-----------SLIRFPKEKDSRCNANK 249 P ++AGDFN + + + Sbjct: 141 PSILAGDFNVMPTEIDVYKPERWLDDALFRPEVRNAYAQLVAQGWTDAVRHLHPGERIYT 200 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ +L S + SDH P+ I Sbjct: 201 FWKYWRNSFERDAGLRIDHLLLSPTVAPWLRSASVR-------RKPRGWEHTSDHAPVVI 253 Query: 301 DYD 303 + D Sbjct: 254 ELD 256 >gi|325285170|ref|YP_004260960.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489] gi|324320624|gb|ADY28089.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489] Length = 344 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 43/325 (13%), Positives = 97/325 (29%), Gaps = 75/325 (23%) Query: 3 RKYVLALVFFLVPCTASVA-------------QKVRLVSWNINTLSEQEGVSLWKNSVKR 49 ++ +L+ + + + + ++++N ++ E S Sbjct: 66 KRILLSALVLFLGYFLVDSFIKFNFSTEKNNETSLTVMTYNTRGFNKYEWSS-------- 117 Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 + + + D DI+ +QE +S R R N Sbjct: 118 DKALGDKIIDFVLKEDPDIICIQE-------------------FSRVRYHQLKHRYKYNY 158 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 + V K + + YP+L + + N A + I V ++HL+S Sbjct: 159 VAPGFYVN-KVNQAIYSKYPILNTGELPFKLTNNIASFADIAYKNDTIRVYNLHLESLKV 217 Query: 170 LDSL-----------ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 + + + S QA+ +++ I + ++ GDFN Sbjct: 218 VPDMETISNEESSKLYGRITKSFKKQQDQAKIVQEHIK---GNPYKTIVCGDFNNNQYSN 274 Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 +D F ++ + + ID+ + + Sbjct: 275 VYRTIKGDLLD------TFNEKGSAYGRTYNFKYYPVRIDFILASKE------------- 315 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303 + K+ +LSDH P+ ++ Sbjct: 316 -FEVIAHKNYDNKLSDHFPVMASFN 339 >gi|240138546|ref|YP_002963018.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP endonuclease VI) [Methylobacterium extorquens AM1] gi|240008515|gb|ACS39741.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP endonuclease VI) [Methylobacterium extorquens AM1] Length = 264 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 81/303 (26%), Gaps = 64/303 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N L + D+V LQE+ +A Sbjct: 1 MRITTWNVN----------------SIKQRVGHLLGFLDEAKPDVVCLQELKCQDA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + +A+ + LQ + L G R Sbjct: 41 ------SFPREEIEAAGYAVETLGQKAYNGVALLVRAP--LQYTQLLRGLPGDAEDEQAR 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 L+ + V I+L + + +Y + L+ + Sbjct: 93 YIEALVHGEGVAPVRVASIYLPNGNPAPGPKYSYKLAFMAR------LRSHARALMTTEE 146 Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 V+AGDFN F + + E + Sbjct: 147 ALVLAGDFNVIPEPEDAADPSVWTQDALFLPETRRAFRALLAEGFTDGLRACEPSAGLYT 206 Query: 248 NK------NLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 RN+ ID+ ++ A L+ S ++ SDH P+++ Sbjct: 207 FWDYQAGCWPRNQGIRIDHLLLSPQAADRLVSASVQRH-------LRGLEKPSDHVPVTV 259 Query: 301 DYD 303 + Sbjct: 260 ELS 262 >gi|329850002|ref|ZP_08264848.1| hemolysin-type calcium-binding repeat 2 copies family protein [Asticcacaulis biprosthecum C19] gi|328841913|gb|EGF91483.1| hemolysin-type calcium-binding repeat 2 copies family protein [Asticcacaulis biprosthecum C19] Length = 2058 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 36/359 (10%), Positives = 80/359 (22%), Gaps = 80/359 (22%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFL 71 V A+ +R+ ++N+ L + + + + + L DI+ + Sbjct: 1212 VTTLTHDARSLRVSTFNVENLGGNAD-----------QARFDAIAEAIADNLLSPDIICI 1260 Query: 72 QEMGSYNAVAK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 +E+ N + T+ + +I Sbjct: 1261 EEVQDNNGTTNDGTVDASTTWQRIVDAVNLATGKTYQWV-DELPVNGAEGGAPGGNIRVG 1319 Query: 114 IAVRKKNV------------------------RVLQQSYPLLGAKD----SFSRAGNRRA 145 V D + R++ Sbjct: 1320 FLYDTARVQLGNLAADATIEERRAYTDRIGDGVRDSGDLIAFSDADVAITTADWTTTRKS 1379 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP---------SCSLLSQQAQWLKDWIT 196 + NG ++V H S D+ + ++ A+ + + Sbjct: 1380 LLAEFTFNGNTVYVTANHFPSKGGSDNFWELDQNNSNGNPTNSDWAQRNEVAEDVWSVLD 1439 Query: 197 QKKESLVP--FVIAGDFNRKINYLGNNDDFWKTIDPNDSLI---------RFPKEKDSRC 245 + + + GDFN Y + + Sbjct: 1440 YIADHDLDARLIEGGDFNDFYFYRPLQVATGSVDADGVTRDPSETRLVNLTVSELAPGER 1499 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ + D+ + + +SDH P +DF Sbjct: 1500 YTYAFDGRSQAIDHILSDEELAAVADYDVVHLNTGYSGRTGATNPAISDHDPTLARFDF 1558 >gi|329959923|ref|ZP_08298454.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] gi|328533220|gb|EGF59985.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] Length = 337 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 35/341 (10%), Positives = 90/341 (26%), Gaps = 57/341 (16%) Query: 1 MIRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKN-----------S 46 M + ++L + + + + + +N+ L + + + + Sbjct: 1 MKKLFILFSFWLCIATLGAQNTERELYSVAFYNLENLFDTIHDAGKNDYEFLPDGSYHWT 60 Query: 47 VKRTTSDYTLLRQYAKNL-------DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99 K+ + L + L + + E+ + N + + + + Sbjct: 61 AKKYEAKLQNLSRVLGALSKELVPEGPAFIGVAEVENRNVLVDLVKQPAISKYEFVHYEG 120 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + I A+ RV L + + R + + E+ G+++ V Sbjct: 121 PDKR-----GIDCALLYDPDQFRVTASKLVLSTPFEGDTVHLTRGFLIVDGELAGERVCV 175 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 + H S + ++Q + LKD + ++ + ++ GD N Sbjct: 176 IVNHWPSRGAKTPVRV-------HAARQVKALKDSL-MCQDKKLKLIVMGDMNDDPMDES 227 Query: 220 NNDDFWKTI-----DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF----- 269 + + + +D D V+ + K Sbjct: 228 MKELGARKYIKEVKKGEFYNPWWETLEDKGVGTLLYRGKWNLFDQIVISKPLLKAKRGLR 287 Query: 270 -------------LIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ++ SDH P Sbjct: 288 YDHNEVFIRDYLIQQDGKYKGSPLRTHGGRTWLNGYSDHLP 328 >gi|297192706|ref|ZP_06910104.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis ATCC 25486] gi|297151462|gb|EFH31179.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis ATCC 25486] Length = 401 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 74/287 (25%), Gaps = 43/287 (14%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +R+++WN + + T LL + DAD++ LQE+ V Sbjct: 114 AGSLRVLTWNTLW-------DRYDSDRIATAVRRPLLIDALREADADVIALQEVEPELLV 166 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + + + + + L K Sbjct: 167 MLLRTPWVRDAYTVATDPGGRD------VDECGLLLLSRLPVREAGHHALGPHK------ 214 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 ++VE G + V HL S D L Sbjct: 215 ---AVTAIVVESGGGPVTVAATHLTSDHSEDGATRRD-----------AELARIAEGLAG 260 Query: 201 SLVPFVIAGDFNRKINYL----GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 V+ GDFN + G D + D+ F + + Sbjct: 261 IDGDVVLMGDFNDGTDAPQTTLGMRDAWSDAHGHGDTTPTFDPGANPLAAVSSLSGRVSR 320 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D ++ + + + D G +SDH + + Sbjct: 321 LDRVLLRSDGLR------VDSAVLRGDVPTPEGLHISDHYGVEVALS 361 >gi|296158362|ref|ZP_06841193.1| exodeoxyribonuclease III Xth [Burkholderia sp. Ch1-1] gi|295891306|gb|EFG71093.1| exodeoxyribonuclease III Xth [Burkholderia sp. Ch1-1] Length = 258 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 30/302 (9%), Positives = 82/302 (27%), Gaps = 68/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + + + D++ LQE Sbjct: 1 MKIATWNVNSL----------------KVRQQHVIDWLETTGTDVLCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + + ++ + +S + F R Sbjct: 35 LKLPDEKFPRAELAEKGYRSWFAGQKTYNGVGILVRDGLTVDESSIVRNIP-GFEDPQQR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E V+ + + + + Y + L DWI + Sbjct: 94 -VIAATIEDT----RVISAYFPNGQAPGTDKFAYK------LRWLAALHDWIASEMALHP 142 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANK 249 + GD+N +D + + + L+ + + Sbjct: 143 KLALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAEFVRLIGLGLVDAFRRFEQPEKIYS 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ + + + D + + + SDH P+ Sbjct: 203 WWDYRMMAFRRNAGLRIDHILLSKALAEVCSSC-------DIDKVPRKWDQPSDHAPVVA 255 Query: 301 DY 302 Sbjct: 256 QL 257 >gi|323530343|ref|YP_004232495.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1001] gi|323387345|gb|ADX59435.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1001] Length = 258 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 83/284 (29%), Gaps = 56/284 (19%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + +R+V++NI+ +G + + L+AD+V LQE+ Sbjct: 27 ASHTGEPLRIVTYNIHGAVGTDG-----------RRSAARIAEVITALNADVVALQEVPL 75 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 A + + + T D AV ++ L S Sbjct: 76 GGAASIDVLRELQDL---TGMHAVPGPTLDGPDRRFGNAVLTNLPVRAVRTLDL-----S 127 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 F R A+++ ++ + ++ HL S Q + L + Sbjct: 128 FGSREARGALDVDIDTGNGLMRIVATHLGL-------------SARERRAQVRLL---LE 171 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 +P ++ GD N + RF + R ++ Sbjct: 172 AFDTPDLPVILLGDLNEWFVWGWPLRALL---------TRFGRVAAPRTFPSRFPAF--A 220 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +D + A ++ + D + SDH P+ Sbjct: 221 LDRVWVHPAAR----------LVDIQVDRSGPARIASDHLPLVA 254 >gi|262383373|ref|ZP_06076509.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262294271|gb|EEY82203.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 246 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 39/308 (12%), Positives = 87/308 (28%), Gaps = 67/308 (21%) Query: 2 IRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 +++ + L L+ + + + +R++S+NI ++ + Sbjct: 1 MKRILFLLTIALLNLGSGLCKTRQSLRIMSYNIR-----------IGIGMDQQTNLKRIA 49 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + + D V LQE+ S + + T + Sbjct: 50 EVINKVQPDYVGLQEVD------------------SVCERSGWINQYAELARLTGM---Y 88 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + L + SR R + + + L + ++ ++ + Sbjct: 89 PIFAPATERSKGLYGIAALSRKKPRSYQYIPLPGKEEPRTFLCLEYPNYTLCNTHFSLDP 148 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIR 236 S + ++ P +I GDFN + + W+ + Sbjct: 149 DS------RLASIRLINETMTSENKPILITGDFNMEPDSKEFKAMKQTWRLLSD------ 196 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + ++ +DY D +I + +I + SDH Sbjct: 197 ------PTLETYPSDHPRLRLDYIFGDLKHEFRIINDQVIDI------------QSSDHL 238 Query: 297 PISIDYDF 304 PI ID F Sbjct: 239 PIYIDVLF 246 >gi|325121513|gb|ADY81036.1| putative extracellular nuclease [Acinetobacter calcoaceticus PHEA-2] Length = 812 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 49/325 (15%), Positives = 91/325 (28%), Gaps = 50/325 (15%) Query: 21 AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSY 77 A +R+ S+N+ N + G + + + D + K +DAD+ L E+ + Sbjct: 461 ANHIRVASFNVLNYDNGATGFPTERGATTQAEFDKQHRKIVSALKAIDADVYGLMEIANN 520 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + S + + R + I AI K V+ L + L D Sbjct: 521 GYGPNSAIAHLTSALGSDWKYVVPENLDRLGGDAIAVAIIYNSKRVKPLNKPVVL----D 576 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF---LDSLENTYSPSCS-----LLSQQ 187 + A K V+ HLKS S + + Sbjct: 577 LGDKNRTTLAQSFQAVRGNKTFTVIPNHLKSKSCSGVDASSTDADQKDGQGCWNPTRVKA 636 Query: 188 AQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + W+ + ++ GD N + N ++ + Sbjct: 637 VDQIVQWLAKNPTQVPKQNALLVGDMN----SYAKEEPILSFEKANYKVLLNDAKVGQGT 692 Query: 246 NANKN----------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289 A +D+ + D Y +++ I +E + Sbjct: 693 QAYSYVFGVASDANGNGGAGNLDHAIADAALYPKVVRTFAWHINADEPTVLDYNEEYKTD 752 Query: 290 -----------KRLSDHCPISIDYD 303 R SDH P+ +D D Sbjct: 753 EQKALFYGEDAYRSSDHDPVIVDLD 777 >gi|312114912|ref|YP_004012508.1| exodeoxyribonuclease III Xth [Rhodomicrobium vannielii ATCC 17100] gi|311220041|gb|ADP71409.1| exodeoxyribonuclease III Xth [Rhodomicrobium vannielii ATCC 17100] Length = 268 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 35/307 (11%), Positives = 75/307 (24%), Gaps = 67/307 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+ +WNIN + L+ ++ + DI+ LQE+ Sbjct: 2 TLRITTWNIN----------------SVRLRFELVARFVRETRPDILCLQEIKCR----- 40 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + L + +A K L + Sbjct: 41 ----DEFFPLEGFRELGFPHIAICGQPGYHGVATLSKLPLE------PLPRQSFCGTEEA 90 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + +G + + +I++ + D + +P L W + Sbjct: 91 RHLGAKVALPSGGTLALHNIYVPAG--GDIPDPELNPKFKQKLAYLAALAKWERGWTDDA 148 Query: 203 VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 ++ GDFN + + K + K Sbjct: 149 NAVLV-GDFNVAPLETDVWSHKQLLKVVSHTPVEVEALTKVRVDGRWVDLVRKVIPPEEK 207 Query: 247 ANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ + S SDH Sbjct: 208 VYSWWSYRARDWAASDRGRRLDHIWGSAAMAERTRAVSV-------LKDARGWPGPSDHV 260 Query: 297 PISIDYD 303 P+++D++ Sbjct: 261 PVTLDFE 267 >gi|229174398|ref|ZP_04301930.1| Exodeoxyribonuclease [Bacillus cereus MM3] gi|228608958|gb|EEK66248.1| Exodeoxyribonuclease [Bacillus cereus MM3] Length = 252 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 85/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + +Y + + DI LQE+ + + Sbjct: 1 MKLISWNVNGLRAVIAKGGF--------------LEYLEESNVDIFCLQEIKLQDGQIDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ + + + ++ A+ K + + D R Sbjct: 47 NPEGYYTYW-----------NYAVKKGYSGTAIFTKKEPLSVTYGLGIEEHDQEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + + L + Sbjct: 92 -----VITLEFEDFYMITLYTPNSKRGLERLDYRMKWEDDFRAYIKQL--------DEKK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V GD N + + + I + + + A Sbjct: 139 PVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTCILEEGFIDTYRYLYPDQEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV+ + + + + + SDHCP+ Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDKITEAKINSEV-----------MGSDHCPVE 247 Query: 300 IDYDF 304 + +F Sbjct: 248 LHINF 252 >gi|170750144|ref|YP_001756404.1| exodeoxyribonuclease III Xth [Methylobacterium radiotolerans JCM 2831] gi|170656666|gb|ACB25721.1| exodeoxyribonuclease III Xth [Methylobacterium radiotolerans JCM 2831] Length = 269 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 29/309 (9%), Positives = 75/309 (24%), Gaps = 70/309 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80 ++ + +WNIN L+ ++ D++ LQE Sbjct: 2 QLTVTTWNIN----------------SVRLRIDLVLRFLAEHKPDVLCLQETKCPDDAFP 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K + + + + +A+ + + +D+ Sbjct: 46 LKALRGSGYEHVM-----------FAGQKGYNGVAILSRFPLHTRSVMGFCERQDA---- 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R +L G ++ D + +P + L+ W ++ Sbjct: 91 --RHISAVLGPEAGAASGIVLHDFYVPAGGDVPDRDLNPKFAHKLDFLSELRAWGGKRVS 148 Query: 201 SLVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSL-IRFPKEKDSR 244 P ++ GD N ++ + + + Sbjct: 149 G--PAILVGDLNVAPLEHDVWSHKQLLDVVSHTPLETEALEVLRGEAGWIDAARHLTPEP 206 Query: 245 CNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + +D+ + + + +R SD Sbjct: 207 EKIYTWWSYRSPDWSAANKGRRLDHAWVSPDLAG-------TVRKVEVLREARAWERPSD 259 Query: 295 HCPISIDYD 303 H P+++ + Sbjct: 260 HAPVTLTLE 268 >gi|119491403|ref|ZP_01623422.1| Exodeoxyribonuclease III xth [Lyngbya sp. PCC 8106] gi|119453398|gb|EAW34561.1| Exodeoxyribonuclease III xth [Lyngbya sp. PCC 8106] Length = 261 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 91/304 (29%), Gaps = 68/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N + + + + D++ LQE + Sbjct: 1 MKIATWNVN----------------SIRTRKEQVLAWLQANPVDLLCLQETKVID----- 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ--SYPLLGAKDSFSRAG 141 S + + S + +A+ + +L + Sbjct: 40 -----PDFPRSPFEDLGYHLYVSGQKAYNGVAIFSRQPLEDVSLGFTAILAQNTVQTFDE 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R + ++ I V+++++ + + S + Y S + LK+++ + E Sbjct: 95 QKRVIAGTID----GIRVINLYVPNGASVGSEKYLYKLS------WLKLLKEYLQKTLEK 144 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247 + GDFN + ++ + L ++ +S Sbjct: 145 NPNICVCGDFNIALEDRDIHNPKGRENHIMASDAERQALKEILELGLADAFRKFNSESEQ 204 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ + + Y+ D + ++ SDH P+ Sbjct: 205 FSWWDYRAASFPRNKGWRIDHHYLTSSLYEKAKSCII-------DKTPRKLEKPSDHTPV 257 Query: 299 SIDY 302 +++ Sbjct: 258 IVEF 261 >gi|303236932|ref|ZP_07323510.1| endonuclease/exonuclease/phosphatase family protein [Prevotella disiens FB035-09AN] gi|302482861|gb|EFL45878.1| endonuclease/exonuclease/phosphatase family protein [Prevotella disiens FB035-09AN] Length = 324 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 40/321 (12%), Positives = 95/321 (29%), Gaps = 50/321 (15%) Query: 19 SVAQKVRLVSWNINTLSE-------QEGVSLWKNSVKRTT----SDYTLLRQYAKNLD-- 65 +++R+V WN+ L + + L + T + Q + Sbjct: 17 FAQERLRIVEWNVENLFDTVHDSLKNDSEFLPNSPRHWTRTKYWEKLNKIGQGILSCGED 76 Query: 66 ------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 D++ L E+ + + + + ++ + + SN+ +A+ Sbjct: 77 SASWTLPDLIGLCEVENDSTMIYLTQRSNLR-----KARYEYVMTASNDGRGIDVALLYS 131 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYS 178 L K R + ++ E+ +G + ++ +H S + Sbjct: 132 PFSFRFIHADTLAIKPIKGMKPTRDILHVVGEVASGDTLHLVLVHAPSRSGGE------K 185 Query: 179 PSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 S A+ + + I K E +I GDFN + + + Sbjct: 186 VSEPFRLHVAENICNLIDSIKAQEKQANILIMGDFNDYYDNASLRKIYEHGMVNISKNAI 245 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD------------ 284 + + +D ++ Q+ + Q S ++ + ++ Sbjct: 246 GKHGAKA---TYRYKGEWNSLDQMLISQHLLPKVKQCSINDAPFLIEEDNKYGGVKPRRF 302 Query: 285 --IKSRGKRLSDHCPISIDYD 303 SDH P+ +D Sbjct: 303 YNGMRYNGGFSDHLPLVLDLS 323 >gi|312113058|ref|YP_004010654.1| exodeoxyribonuclease III Xth [Rhodomicrobium vannielii ATCC 17100] gi|311218187|gb|ADP69555.1| exodeoxyribonuclease III Xth [Rhodomicrobium vannielii ATCC 17100] Length = 262 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 36/302 (11%), Positives = 76/302 (25%), Gaps = 66/302 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + +WN+N Q+ K D++ LQE+ Sbjct: 2 LTVATWNVN----------------SIKQREIAAVQWLKRARPDVLCLQEIKCQTEA--- 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ +A+ K ++G + +R Sbjct: 43 -------FPRGAFEDLGYNCAVIGQKSFNGVAILSKFPI----DETVVGLPGDDTDEQSR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +L G V ++ + + S + Y + K Sbjct: 92 YIEAVLSLPGGGAFRVASVYAPNGNPVASPKLDYK------LEWLARFKAHAETLLSYEE 145 Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 PF +AGD+N L + F + ++ + Sbjct: 146 PFALAGDYNIIPRGIDVYNPAAWTEDALYRLESRQAFRRILNLGLADAVEACNSGGGQFT 205 Query: 248 NKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + ID+ ++ A+ L D + SDH P+ + Sbjct: 206 FWDYQAGAWQKNLGLRIDHILLSPQAFSRLRS-------TVIDRTPRSWDKPSDHTPVQV 258 Query: 301 DY 302 Sbjct: 259 TL 260 >gi|302405771|ref|XP_003000722.1| endonuclease/exonuclease/phosphatase family protein [Verticillium albo-atrum VaMs.102] gi|261360679|gb|EEY23107.1| endonuclease/exonuclease/phosphatase family protein [Verticillium albo-atrum VaMs.102] Length = 334 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 76/288 (26%), Gaps = 21/288 (7%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AVAK 82 RL+S+NI + + R S + L ++ LQE+ + + Sbjct: 50 RLISYNIRW-AVPTVLPPEPAWSDRLPSLASQLFHETAGRPTSLICLQEVLATQLADIKS 108 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 TW S + P + A Sbjct: 109 ALGTPTWSSVGVGRDDGAEGGEFSPILFRPDAYELLNSSTRWLSPTPEEPGSKGWDAALP 168 Query: 143 RRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + +G + + H F + S LL + A + Sbjct: 169 RVVTTATLRDRRSGAPLTYMCTH-----FDHIGQTARVESARLLVRFAAEAAVVVD---G 220 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK----NLRNKIP 256 P + GD N + + + + P+ N + Sbjct: 221 EETPVFLGGDLNITPENPAYLEMVAEGNYHDAKDVVDPRRIHGHLNTFAGFSDDRSGWSR 280 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ + ++ +Q ++ +SDH P+ +D +F Sbjct: 281 IDHVFV----WRPEVQGMALLNYGVLENKFDDNLWISDHRPVIVDVNF 324 >gi|256839005|ref|ZP_05544515.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256739924|gb|EEU53248.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 365 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 95/334 (28%), Gaps = 78/334 (23%) Query: 4 KYVLALVFFLVPCTASV--------------AQKVRLVSWNINTLSEQEGVSLWKNSVKR 49 K++L +F + C V + ++++++N+ + + N Sbjct: 68 KFLLIGIFSFLLCWGPVKRYFPFHSHKDVPREEVLKVLTYNVMAFGYKNHTKIAPN---- 123 Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 + QY N DADIV LQE + + + + S + + S Sbjct: 124 ------KIIQYIANSDADIVCLQEYATAKSEKSLTASKIYDA-LSMYPYRSVFYQSSTKF 176 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 IAV K + + + V I GKK+ +++ HL+SF Sbjct: 177 QSFGIAVFSKYPLSNSRMVKYDSDYN--------GSSVHEVNIKGKKLTLINNHLESFKL 228 Query: 170 LDSLENTYS-----------------------PSCSLLSQQAQWLKDWITQKKESLVPFV 206 YS P+ + ++QA+ + I + Sbjct: 229 TMEDRTRYSSLIKSFSSDGLDDLKGAFEQKLGPAFRIRAKQAEAVSKEIKN--AKGDYVL 286 Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 + GDFN + D + F + ID + N Sbjct: 287 VCGDFNDTPISYAHRTI------QGDLMDAFAESGRGMGITYNQNFFWFRIDNILHSPNM 340 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + SDH P+ Sbjct: 341 TSM--------------NCSVDKVAYSDHYPLWC 360 >gi|222478473|ref|YP_002564710.1| Endonuclease/exonuclease/phosphatase [Halorubrum lacusprofundi ATCC 49239] gi|222451375|gb|ACM55640.1| Endonuclease/exonuclease/phosphatase [Halorubrum lacusprofundi ATCC 49239] Length = 280 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 41/300 (13%), Positives = 80/300 (26%), Gaps = 46/300 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R++S+N+ + + W + + + + D+ QE Sbjct: 4 IRVLSYNVRYANRDDHHDAWHD-------RRDAVGRLVRFHRPDVAAFQEPLPGQRRDLR 56 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS-----FS 138 + + + + IAVR V+ L S + Sbjct: 57 ERLSEYEFV-------GRGREADDEGESCPIAVRTDRWEVVDDDTFWLSETPSEPSTDWG 109 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R A V +L ++ F + S LL Q+ + + Sbjct: 110 ADYPRIATWARVRAIDGDAALLVVNTH---FDHVSAHARRESARLLCQRLPDVAGPDAGE 166 Query: 199 KESLVPFVIAGDFNRKINYLGNN----------------DDFWKTIDPNDSLIRFPKEKD 242 + +P V+ GDFN + DD + + + Sbjct: 167 SDETIPVVLVGDFNCTSGSDPHRILVGDDPTAETDTAPIDDSGIALRDAATAADLRHGPE 226 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + L + ID+ ++ D RG+ SDH P+ Sbjct: 227 TSLTDFARLIDGRRIDHALVSPEVGAEAFA--------TLTDRDDRGRYPSDHLPVLARL 278 >gi|327314063|ref|YP_004329500.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola F0289] gi|326945779|gb|AEA21664.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola F0289] Length = 347 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 94/352 (26%), Gaps = 64/352 (18%) Query: 2 IRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSE-------QEGVSLWKNSVKRT 50 +RK + L ++ ++ AQK + +N L + + + S Sbjct: 1 MRKLLFVLFCTVLFGASASAQKKFSVYAVGFYNQENLFDCMHDKGKNDYDFTPEGSYHWN 60 Query: 51 T----SDYTLLRQYAKNLDADI--------VFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + + D+ + L E+ + + + + + + Sbjct: 61 EMKYTHKLHNMATVLSEMGTDVLPDVGCALIGLAEVENDHVMRDLTAQPE---LAARNYQ 117 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 H + + I A+ K V P + S R + + + G+ + Sbjct: 118 YVHIEGPDHRGIDCALIYNPKLFAVRNTKLVPYVYDLPKDSMRATRGFLTVSGTLAGEHV 177 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 V+ HL S Q + LKD + + + V ++ GD N Sbjct: 178 TVVVCHLPSRGADSYYRELGGR-------QVKALKDSLLRD-DPKVKVLVMGDMNDDPTN 229 Query: 218 LGNNDDFWKTID------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 + + + + + D +M Sbjct: 230 KSIRECLSAKAEISEVGPDDMYNPWYNVLVKEGTGTLQYQGKWNLFDQILMSPGLLNKEN 289 Query: 272 QESFSEILYNEDDIKSRGK-----------------------RLSDHCPISI 300 ++ FSE+ + + I R SDH P+ Sbjct: 290 RKDFSELRFWKSQIFRRDYLFQETGKYKGNTKRTTAGGVWLDGYSDHLPVVA 341 >gi|91777907|ref|YP_553115.1| exodeoxyribonuclease III [Burkholderia xenovorans LB400] gi|91690567|gb|ABE33765.1| Exodeoxyribonuclease III [Burkholderia xenovorans LB400] Length = 270 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 83/304 (27%), Gaps = 70/304 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+R+ ++NIN S L Q+ + DIV LQE+ + ++ Sbjct: 3 KLRIATFNING----------------IRSRLPALLQWLEREAPDIVCLQELKAADSA-- 44 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 R + +A+ K L+ L G +D Sbjct: 45 --------FPVEQLRDAGYGAIWQGQSAWNGVAILSKGEAPLESRRGLPGFEDDTHSRYL 96 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 AV I V ++L + + Y + L + S Sbjct: 97 EAAV--------GGIVVACLYLPNGNPQPGPKFDYKLA------WFDHLIRHAAKLYRSG 142 Query: 203 VPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCN 246 P V+AGDFN + + + + + + + R Sbjct: 143 HPVVLAGDFNVVPTDEDIYNPRSWLKDALLQPESRERYRQLLAQGWTDALRTRFGNERVY 202 Query: 247 ANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID+ ++ + L D SDH P Sbjct: 203 TFWDYFRRHWETNSGLRIDHLLLSADLAPRLRDAGV-------DRWVRGEPHASDHAPTW 255 Query: 300 IDYD 303 ++ + Sbjct: 256 VELE 259 >gi|301095100|ref|XP_002896652.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262108882|gb|EEY66934.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 806 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 93/306 (30%), Gaps = 25/306 (8%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+R++ +N+ L S + + + + + +L+ D+V E +A K Sbjct: 502 KLRVMVYNV-WLLPGFVSSFNEKVSPWASQRASAIPRCLASLNVDVVVFCEAFCSSAREK 560 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F +++ S+ I K + R Sbjct: 561 LVSGMKSQGFIYETKIVGDVSLLSSKKAIDGGCFAMSKYPLSNCEEVTFGNVASGEDRYA 620 Query: 142 NRRAVELLVEINGKKIWV-LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KK 199 ++ + V + K S + + Q +++++ + Sbjct: 621 DKGVIYFQVRVPVKSYSGSDTTQTVHIVGTHLQAWETSLAVATRKGQMTLMRNFVNSLRL 680 Query: 200 ESLVPFVIAGDFNRKINYLG------NNDDFWKTIDPNDS--------LIRFPKEKDSRC 245 P + AGD N + G + ++ P D Sbjct: 681 PKHEPVIYAGDMNVNKHADGAQIPEGEYTGMLDLLGVDEPQLQEKSPIYSFDPHSNDLAV 740 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQES-FSEILYNEDDIKSRGK------RLSDHCPI 298 + + +DY ++D++ + + ++ ++ SRG LSDH P+ Sbjct: 741 DGPSSGGIAERLDYVMVDRSHRLPVSASTEIVQLKATKNWAPSRGAIDEILVDLSDHYPV 800 Query: 299 SIDYDF 304 D+ F Sbjct: 801 VGDFHF 806 >gi|226228755|ref|YP_002762861.1| exodeoxyribonuclease III [Gemmatimonas aurantiaca T-27] gi|226091946|dbj|BAH40391.1| exodeoxyribonuclease III [Gemmatimonas aurantiaca T-27] Length = 265 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 82/303 (27%), Gaps = 62/303 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N L L+ + + D++ LQE S ++ Sbjct: 1 MKIYSWNVNGLRAVLKKGLFMP--------------FIETHQPDVLCLQETKSEREQVEI 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++++ +S + ++V + + + Y L+ S R Sbjct: 47 -DLAGYHEYWNSATTKGYSGTAIFSRTE-PLSVTNGFAKAVAKKYTLVDDAGRDSETEGR 104 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ +K +V+ ++ + L SQ + E Sbjct: 105 -----VITAEFEKFFVVTVYTPN-------AKDDLSRLPLRSQHWDAAFLAHCKALEMKK 152 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V GD N +++ + + + Sbjct: 153 PVVFCGDLNVAHTELDLANPKPNRGRKGFTDEERQGFQSFLDAGFVDTLRMFHQGNGHYS 212 Query: 249 KNLRN--------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 IDY ++ K + SDHCP+S+ Sbjct: 213 WWSHFANSRARNVGWRIDYVLVSAALQKSVATAEIH-----------ADVMGSDHCPVSV 261 Query: 301 DYD 303 Sbjct: 262 TLS 264 >gi|254413797|ref|ZP_05027566.1| endonuclease/exonuclease/phosphatase family [Microcoleus chthonoplastes PCC 7420] gi|196179394|gb|EDX74389.1| endonuclease/exonuclease/phosphatase family [Microcoleus chthonoplastes PCC 7420] Length = 550 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 35/332 (10%), Positives = 90/332 (27%), Gaps = 54/332 (16%) Query: 18 ASVAQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + + ++N+ L K S + T + + + +DADI+ QE+ Sbjct: 222 PVRQKTLNVGTFNLYNLVLPNVTYYETNKYSPELYQRKKTWIARQIEQMDADIIGFQELF 281 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 A+ ++ + + + + + +A+ K + Q + K Sbjct: 282 HEEALREILTE-------TPDCANANLITANPTGDKPTVALLSKVPVLNHQIFTEFPEKA 334 Query: 136 SFS--------RAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 + +R + + + ++ + V HLKS + + S Sbjct: 335 RLDIEGTAIPLHSFSRPLLSVDLALSDTVECTVFVAHLKSKRPIIPEDADRSDPMEKAKG 394 Query: 187 QAQWLKD-----------WITQKKESLVPFVIAGDFNRKI---------NYLGNNDDFWK 226 QA+ L + + P ++ GD N + Sbjct: 395 QARALLRRAAEATALRVILMETLQNRKRPVIVIGDLNDSGLAVTSKIISGEPPWEKLRFA 454 Query: 227 TIDPNDSLIRF-------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 ++ + + + +D+ ++ + Sbjct: 455 QKQEIWDVLLYSVKDIQARQSYGDFYYTHIYNGYYESLDHIMVSEELVAQNPDRIGKVTY 514 Query: 280 YNEDDIKSRGKRL---------SDHCPISIDY 302 + + + L SDH + Sbjct: 515 VSVYNDHLIDETLSYEDMKKWKSDHGQVVASI 546 >gi|319953162|ref|YP_004164429.1| endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM 14237] gi|319421822|gb|ADV48931.1| Endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM 14237] Length = 325 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 39/319 (12%), Positives = 88/319 (27%), Gaps = 51/319 (15%) Query: 25 RLVSWNINTLSEQEGVSLWKNS-----------VKRTTSDYTLLRQYAKNLDAD------ 67 + +N+ L + E ++ +R S L + D Sbjct: 17 TVAFYNLENLFDTEDNPDKLDTDYTPNGKLKWTPERYHSKLFKLASTISKIGFDAIGKAP 76 Query: 68 -IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 ++ + E+ + + + + + I A+ K+ +V+ Sbjct: 77 VLIGVVEVENKKVLKDLLAEPVLASNAYDFIHYDSPDE---RGIDNALIFDKRFFQVIHS 133 Query: 127 S-YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC-FLDSLENTYSPSCSLL 184 PL + R + + ++N +++ + H S D E + + + Sbjct: 134 EAIPLKVFNLDGQQDMTRDILYVHGKLNEEEVHIFVNHWPSRRDGGDETEYKRIKAAATI 193 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + L++ K S +++ GDFN + N ++ S Sbjct: 194 INFMKVLEE-----KYSEPNYIVMGDFNDGPQTASVKKLVGEKNLFNPMEKLLTPKRGSA 248 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQ-------------------ESFSEILYNEDDI 285 K D ++ + F + F + Sbjct: 249 NYKFKW----SLFDQILISHSFLNFEKKTHSFNSSNIFDDHFLTEFKGKFKGSPFRTYVG 304 Query: 286 KSRGKRLSDHCPISIDYDF 304 + SDH P+ I F Sbjct: 305 RRYMGGYSDHFPVYIHLKF 323 >gi|237716270|ref|ZP_04546751.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262407875|ref|ZP_06084423.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294807694|ref|ZP_06766487.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|229443917|gb|EEO49708.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262354683|gb|EEZ03775.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294445130|gb|EFG13804.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|295084435|emb|CBK65958.1| Metal-dependent hydrolase [Bacteroides xylanisolvens XB1A] Length = 365 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 87/299 (29%), Gaps = 68/299 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + ++N++ + + + Y +NL ADI+ QE + Sbjct: 110 LTVATYNVDAFNHEHTGYSC-----------KEIASYMRNLQADILCFQEF----GINDE 154 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F ++ S + +AV + + +K+ Sbjct: 155 FGIDSISAALSNWPYH-YIPSSPEGKNLLQLAVFSRYPIKEEHLIIYPDSKNCS------ 207 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------PSC 181 + +EING+ I + + HL++ + + Sbjct: 208 --LACDIEINGRTIRLFNNHLQTTEVSQNKRKLEKGLRTDDSQRVEHATLGLIDGLHENF 265 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + QA LK I S P ++ GDFN + + TI + F Sbjct: 266 RKRAVQADLLKQLI---AASPYPTLVCGDFNSLPSSYVYH-----TIKGDKLQDGFQTSG 317 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 K ++ + IDY + N D S SDH P+ + Sbjct: 318 HGYMYTFKYFKHLLRIDYILHSPEL--------------NSTDYFSPDLNYSDHNPVVM 362 >gi|37520069|ref|NP_923446.1| hypothetical protein glr0500 [Gloeobacter violaceus PCC 7421] gi|35211061|dbj|BAC88441.1| glr0500 [Gloeobacter violaceus PCC 7421] Length = 1019 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 39/340 (11%), Positives = 78/340 (22%), Gaps = 75/340 (22%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQ 72 A+ ++ + S+N+ L + T L DI+ LQ Sbjct: 616 TTLAAGGSQLTIASFNVENLDPGD------------TERIAGLAAAVTGNLKSPDILVLQ 663 Query: 73 EMGSYNAVAK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 E+ N + + + N + +I Sbjct: 664 EVQDNNGPTDDGTVDSTTTLADLAAAIAGVGGPAYNFRF-INPVNNQDGGEPGGNIRVVF 722 Query: 115 AVRKKNVRVLQQSYPLLGA-------------------------KDSFSRAGNRRAVELL 149 V + + P + + +R+ + Sbjct: 723 LFNPARVSFIDRPAPDGTDLSTTAVGAVDGPSGLELTFSPGRIDPANPAFDDSRKPLVGE 782 Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLV 203 NG+K++V+ H S L P S QA + ++ ++ Sbjct: 783 FLFNGRKLFVVGNHFNSKGGDTPLFGAAQPPVLNSEPQRLGQATAVNSFVQSLLALDAKA 842 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 ++ GD N + N +D+ ++ Sbjct: 843 SVIVLGDLNDFQFSPP----LATLQQGGILSNLIDAVSPADAYTFNFQGNSQVLDHILLS 898 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + LSDH P D Sbjct: 899 GSLAAGAEIDIVHLD-------SEFADALSDHDPPLARLD 931 >gi|149909989|ref|ZP_01898638.1| exodeoxyribonuclease III [Moritella sp. PE36] gi|149807003|gb|EDM66962.1| exodeoxyribonuclease III [Moritella sp. PE36] Length = 274 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 85/311 (27%), Gaps = 70/311 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ +N + Sbjct: 1 MKIISFNINGL----------------RARLHQLQAIIDKHSPDVIGLQEIKVHNEM--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV-LQQSYPLLGAKDSFSRAGN 142 + + + H +A+ K + ++ + + Sbjct: 42 -------FPIAAVEDMGYHVFFHGQKAHYGVAMMVKKSTIADVEAIKVQYGFPTDDEEAQ 94 Query: 143 RRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R + + E +GK I VL+ F ++ + Q L ++ + Sbjct: 95 KRMIMVTFEQTSGKPITVLN-----GYFPQGENISHETKYPYKRKFYQDLNIYLNDNHTA 149 Query: 202 LVPFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKE 240 ++ GD N ++ + F Sbjct: 150 EDDLIVMGDINISPADKDIGIGEPNAKRWLKTGKCSFQPEEREWLAKLQGFGLHDTFRTI 209 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 K + + ID + +++ + D ++ Sbjct: 210 KPEVSDRYSWFDYRSKGFPDNRGLRIDVILATATLNAKVVES-------DVDYELRAIEK 262 Query: 292 LSDHCPISIDY 302 SDH PI + Sbjct: 263 PSDHAPIWTTF 273 >gi|114778638|ref|ZP_01453454.1| exodeoxyribonuclease III xth [Mariprofundus ferrooxydans PV-1] gi|114551103|gb|EAU53664.1| exodeoxyribonuclease III xth [Mariprofundus ferrooxydans PV-1] Length = 252 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 92/304 (30%), Gaps = 76/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + Y ++ D++ LQE + +A Sbjct: 1 MKITTWNVNSLN----------------VRLPHVLAYLRDEQPDVLALQETKTPDA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + S + +A+ + S + R Sbjct: 41 ------GFPVAELEAAGYKVIFSGQKTYNGVAMLAR------SSMQQVVNDLPGLDDPQR 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + ++ + V+++++ + + S + Y + Q L D++ ++ + Sbjct: 89 RLLAATID----GMRVVNVYIPNGQEIGSDKYAYK------MRWLQALCDFLQEELKQHD 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN +F+ T+ + + Sbjct: 139 RLVLLGDFNIAPADIDVHDPTRWQGKILCSEPEREFFSTLLQLGLIDGVRSLHPEKE-MF 197 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ++ ID+ ++ + + R SDH P+ Sbjct: 198 SWWDYRMSAYRRGWGVRIDHLLVTHALALSAAGVAVKYRELD---------RPSDHAPVW 248 Query: 300 IDYD 303 I+++ Sbjct: 249 IEFE 252 >gi|291513900|emb|CBK63110.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301] Length = 263 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 89/297 (29%), Gaps = 41/297 (13%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + A A+ ++L+S+N+ T ++G ++W T + + D+ +Q Sbjct: 1 MPAFAADGAEPIKLISYNLRTSHGKDGDNVWMKRRHATP-------EMIRREAPDVFGVQ 53 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E + +R + + ++ L Sbjct: 54 EGLIDQLHYIDTECPQYARVGVGRDDGAEKGEFMAVYY-----LRDRFELLDSGTFWLSE 108 Query: 133 AKD----SFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 D + A NR + ++ +GK+ + + HL + + Sbjct: 109 TPDKVSRGWDGACNRTVTWVELKDRKSGKEFFYFNTHLDHKGK------------AAREE 156 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + L + I + P ++ GDFN ++ K + + N Sbjct: 157 GVKLLIEKIHEIAGKKAPAIVGGDFNTPVDS-PIFKPLTKYMVS-ARAKAATTDHKGTFN 214 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + I ID+ L + D +SDH PI++ + Sbjct: 215 GFGSAPDTIVIDHLYYRGKLKCQL---------FATLDGNYGAPYISDHYPIAMVFT 262 >gi|328863402|gb|EGG12502.1| hypothetical protein MELLADRAFT_46528 [Melampsora larici-populina 98AG31] Length = 556 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 38/333 (11%), Positives = 83/333 (24%), Gaps = 55/333 (16%) Query: 22 QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + ++ +NI + + L+ Q AD++ LQE+ Sbjct: 219 ETFTMMCYNILCERYASDRMYGYTPSWALNWEYRKDLILQELMQYGADLICLQEVDVEQY 278 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQS------YP 129 + + ++ + + A + +++++ P Sbjct: 279 EDFFVQNLKDQGYEGVFFPKSRARTMGSEERRHVDGCATFFKTSIFQLIERECVEFNQIP 338 Query: 130 LLGAKDSFSRAGNR--------RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + S NR L +G + V ++H+ + Sbjct: 339 MRSESHKTSDMFNRVMTKDNIAVIAMLEHRRSGTRQLVANVHIHW---DPEFRDVKLIQT 395 Query: 182 SLLSQQAQWLKDWITQKKESLV-----------PFVIAGDFNRKINYLGNNDDFWKTIDP 230 ++L +Q + L D + P ++ GDFN + I+ Sbjct: 396 AMLIEQVENLADRFAKLPPRHSHSPKYQRGTEIPIIVCGDFNSVPTSGVYDYLSHGNIEA 455 Query: 231 NDSLIRFPKEKDSR--------------------CNANKNLRNKIPIDYFVMDQN-AYKF 269 N K IDY ++ Sbjct: 456 THDDFNSFNYGPYTQQGVQHPLKLKSAYSHLGELPFTNYTPGFKGVIDYIFYNEEVLDVT 515 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + E + SDH P+ ++ Sbjct: 516 GVLGKIDETYLEKVVGFPNAHFASDHVPVLAEF 548 >gi|329965398|ref|ZP_08302322.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] gi|328522190|gb|EGF49304.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] Length = 361 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 93/336 (27%), Gaps = 78/336 (23%) Query: 1 MIRKYVLALVFFLVPCT----------------ASVAQKVRLVSWNINTLSEQEGVSLWK 44 M RK+ + C A+ +++ ++N++ + Sbjct: 65 MARKWWALIPLAAFFCNWNYLTSVIQFHSPKEKTPSARHLKIATYNVHNFGD-------- 116 Query: 45 NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104 + T + +Y + DI+ LQE G+ + F ++ S + + Sbjct: 117 ---EITGYSCKEMARYMQQEHVDILCLQEFGNN----RYFTADSIRKALSHWPHVLTLQE 169 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164 DS +RK + YPL+ + ++ + + +L+ HL Sbjct: 170 DS---------LRKVLPIAVFSRYPLIHERFITYPQSANCSMLCDIVAGTDTVRLLNSHL 220 Query: 165 KSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK---------------KESLVPF 205 ++ + A+ + + K S P Sbjct: 221 QTTSVSQKRGKWQREMASDDARREIRAAKDAAETLHGNFVKRTLQTYTVGYFAKNSPYPV 280 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 ++ GDFN + F + F + + + + IDY Sbjct: 281 IVCGDFNSLPSSYT-YQYFSGFLKDG-----FRTAGNGYMYTYRYGKKMLRIDYIFHSNE 334 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + SDH P+ ++ Sbjct: 335 LE-------------GMSYYSPTQEFCSDHNPVIME 357 >gi|260549985|ref|ZP_05824200.1| nuclease [Acinetobacter sp. RUH2624] gi|260406977|gb|EEX00455.1| nuclease [Acinetobacter sp. RUH2624] Length = 812 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 47/325 (14%), Positives = 94/325 (28%), Gaps = 50/325 (15%) Query: 21 AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSY 77 A +R+ S+N+ N + G + + + D + K +DAD+ L E+ + Sbjct: 461 ANHIRVASFNVLNYDNGATGFPTERGANTQAEFDKQHRKIVSALKAIDADVYGLMEIANN 520 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + R + I AI K V+ L + L Sbjct: 521 GYGPNSAIAHLTSALGPDWKYVIPENLDRLGGDVIAVAIIYNSKRVKPLNKPVVLDLGD- 579 Query: 136 SFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPS--------CSLLS 185 NR + + K V+ HLKS N+ Sbjct: 580 -----KNRTTLAQTFQAVRGNKTFTVIPNHLKSKGCTGVDANSTDADQNDGQGCWNPTRV 634 Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + + W+ + ++ GD N ++ + L + + Sbjct: 635 KAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAPI--LAFEKANYKVLLNDAKVGQGA 692 Query: 244 RCNANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289 + + +D+ + D + Y +++ I +E + Sbjct: 693 QAYSYVFGVASDANGNGGAGNLDHAIADADLYPKVVRTFAWHINADEPTVLDYNEEYKTD 752 Query: 290 -----------KRLSDHCPISIDYD 303 R SDH P+ +D D Sbjct: 753 EQKALFYGEDAYRSSDHDPVIVDLD 777 >gi|323343049|ref|ZP_08083280.1| endonuclease/exonuclease/phosphatase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463113|gb|EFY08308.1| endonuclease/exonuclease/phosphatase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 360 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 41/319 (12%), Positives = 97/319 (30%), Gaps = 57/319 (17%) Query: 22 QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + L+++NI G ++++ + + ++ + D QE Sbjct: 62 KPYTLLTYNIGYAALGQDQDFFMDGGNKAGADTLEEVLLNMDGILSIFQDTNPDFALFQE 121 Query: 74 MGSYNAVA------KVFPKNTWCIFYSTERLINH---SKRDSNNDIHTAIAVRKKNVRVL 124 + + + + ++ + + + IA K + Sbjct: 122 VDLSGKRSFNVNQYDLLRNEGYHGIFAPNYKVKYVPVPFTHPMGGAESGIATLSKAEPLS 181 Query: 125 QQSYPLLGAKDSFSRAG-NRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 Y G + + +RA + NGK+ +++ H +F Sbjct: 182 STRYQFNGKEPLVKQLFDLKRAFSVTRYPMDNGKEFILINAHFSAFDKGG---------- 231 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + QQ +K+ + + V+ GDFN ++ +++ W P+ + Sbjct: 232 KVRVQQLAQMKEVLESEYNQGNYVVLGGDFNHELPTTDSHNFTWTDSYPDWIMELPEDFA 291 Query: 242 DSRCNANKNLRNKI----------------PIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 S + + N ID F++ N + + + Sbjct: 292 PSGYHWGVDPDNPSVRAVDKAYRPQETFMAVIDGFLVSDNI-----------EIIDTVGL 340 Query: 286 KSRGKRLSDHCPISIDYDF 304 + + SDH P+S+ F Sbjct: 341 GTVDFKYSDHNPVSMTIIF 359 >gi|46109934|ref|XP_382025.1| hypothetical protein FG01849.1 [Gibberella zeae PH-1] Length = 298 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 42/290 (14%), Positives = 77/290 (26%), Gaps = 19/290 (6%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + +R+V++N+ + ++ + +R L ++ + LQE + Sbjct: 20 AQRMPLRIVTFNVRY-ATKKFEKNERPWAERRPKLINQLNFITAGHESPFICLQECLFHQ 78 Query: 79 AVAKVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + W S I ++ P + Sbjct: 79 VNEIQEDLGSKWQHIGRGRGTKPEDGEFSPIFYRDDIWKNVRSEVRWLSKTPE-KPSRGW 137 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 NR E V+ F S LL + A+ +W Sbjct: 138 DAVLNRIVTMAEFEHRVTATRVVVFSTH---FDHIGVEARQNSAKLLVKFAR---EWGQA 191 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR----N 253 + +I GDFN + + +D PKEK Sbjct: 192 GNKKASAVLIGGDFNSEPDDGAYKTITAPGSGISDVSDLVPKEKRYGNETTYTSFGGTWP 251 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID+ + + + + G R+SDH P+ D D Sbjct: 252 TSRIDFLFIQEPRTATVQTFGVLANSF------DDGVRISDHRPVVSDLD 295 >gi|320007682|gb|ADW02532.1| Endonuclease/exonuclease/phosphatase [Streptomyces flavogriseus ATCC 33331] Length = 804 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 39/328 (11%), Positives = 80/328 (24%), Gaps = 69/328 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ--YAKNLDADIVFLQEMGSYNA 79 +++ + ++N+ L ++ + + L D+V L+E+ N Sbjct: 492 KELAVATYNVENLDAKD-----------EQAKFDTLAHGVAVSLSSPDVVSLEEIQDDNG 540 Query: 80 V-----------------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 A V + + +I V Sbjct: 541 AVNDGTVGSEATLKRFTDAIVAAGGPRYAWRYVAPEDGRDGGEPGGNIRNVFLFNPDRVD 600 Query: 123 VLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 + + P S + +R+ + G+ ++V+ Sbjct: 601 FVDRPGGDATTAVQAVKTKKGATLSVSPGRINPTSTAWDSSRKPLVGEFRFRGESVFVIA 660 Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215 H S SL Y S + +QA + ++T K + V GD N Sbjct: 661 NHFASKGGDQSLHGRYQEPARSSEAQRVRQAAEVNTFVTSLLKADKSARVVTLGDLNDFA 720 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + + N +D+ + +F Sbjct: 721 FSPTVKTLTAGKVLR----PLITTLPAGEQYSYVYDGNSQTLDHILTSPAVSRF------ 770 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 + SDH P + D Sbjct: 771 --DYDVVHINAEFADQASDHDPQIVRID 796 >gi|197103425|ref|YP_002128803.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1] gi|196480701|gb|ACG80228.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1] Length = 262 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 33/303 (10%), Positives = 79/303 (26%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++N+N ++ +L ++ + D+V LQE Sbjct: 1 MRIATFNVNGVNG----------------RLPVLLRWLEETRPDVVCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ + ++ L G + Sbjct: 35 LKAPQERFPAEAIERAGYGAIWAGQKSWNGVAMLARGAEPVEIRRGLPGDTEDLQSRYLE 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 AVE ++ V ++ + + Y + L + ++ Sbjct: 95 AAVEGVL--------VACLYAPNGNPAPGPKFDYKLA------WLARLNRRAAELVKTCT 140 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGDFN + ++ + + Sbjct: 141 PAVLAGDFNIIPTELDAYKPERWVDDALFRPESRAAFEALLDQGWRDALRSLHPAERIFT 200 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ L+ D + SDH P+ + Sbjct: 201 FWDYFRNAFPRDAGLRIDHLLLSPTLSSRLVAAGV-------DRHVRGWAKTSDHAPVWV 253 Query: 301 DYD 303 + + Sbjct: 254 ELE 256 >gi|325527267|gb|EGD04639.1| exodeoxyribonuclease III [Burkholderia sp. TJI49] Length = 258 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 31/300 (10%), Positives = 78/300 (26%), Gaps = 68/300 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + D++ LQE Sbjct: 1 MKIATWNVNSLN----------------VRKQHVLDWLAQSGTDVLCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + I + + + +A+ + L + + Sbjct: 35 LKLPDEKFPRADLEAIGYRSWFTGQKTYNGVAILAR--DTLPFDESDIVRNIPGFDDPQQ 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R V + ++ + + + + DS + Y Q L+ W+ + + Sbjct: 93 RVVAVTID----GVRFVSAYFPNGQAPDSDKFVYK------MQWLDALQAWLRAEMQRYP 142 Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249 + GD+N +D + P + + + Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLIELGFVDAFRRFEQPEKTFT 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ D ++ SDH P+ Sbjct: 203 WWDYRMFAFRRNAGLRIDHILLSPALADTCTSC-------VVDRTPRTWEQPSDHTPVVA 255 >gi|330811892|ref|YP_004356354.1| hypothetical protein PSEBR_a4928 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380000|gb|AEA71350.1| Conserved hypothetical protein; putative exported protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 359 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 44/341 (12%), Positives = 96/341 (28%), Gaps = 68/341 (19%) Query: 8 ALVFFLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTS--------DYTLL 57 L A +A Q +++++WN+ L+ + V + S + Sbjct: 35 TLPVSCTANAAPLAPGQALKVMTWNVQFLAGKRYVFWHDLAQGNDESPTLEDMAFSLDEV 94 Query: 58 RQYAKNLDADIVFLQEMG------SYNAVAKVFPKNTWCIFYSTE-------RLINHSKR 104 + ++ D+V LQE+ Y K+ + ++ + Sbjct: 95 ARVIRDEQPDVVLLQELDKGAKASDYQDQLKLLQERLADLYPCGTSAFDWKADFVPDPHI 154 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDI 162 + A R + + P+ + + A+ + G ++ VL+ Sbjct: 155 FGSVGRQLATLSRYRIDHAERVQLPVADTNIISRQFQPKNALLVSYLPLSGGGQLAVLNT 214 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------- 212 HL + L +Q + + + + + P++I GDFN Sbjct: 215 HL----------ERATEPDETLPRQITAVAKALDKFESAGTPWLIGGDFNLLPLGQYRRL 264 Query: 213 -----------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 ++ L + T + + R + N +DY Sbjct: 265 PTEQRTPYSADSPLHLLWDKYPMIPTNNEASGIDREHWLTHYPNDPGLN-GPDRTVDYLF 323 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + R+SDH P+ + Sbjct: 324 YSPRLK-----------RVEAQVRQDDTLRISDHLPVIARF 353 >gi|289645316|ref|ZP_06477309.1| Endonuclease/exonuclease/phosphatase [Frankia symbiont of Datisca glomerata] gi|289504875|gb|EFD25980.1| Endonuclease/exonuclease/phosphatase [Frankia symbiont of Datisca glomerata] Length = 327 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 38/328 (11%), Positives = 87/328 (26%), Gaps = 50/328 (15%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL--------LRQYAKNLDA 66 A ++ + ++N+ L + S + ++ ++ ++ ++ Sbjct: 9 STGGPGAGQISVATFNVENLDPSDPQSKFDGLAQQIVTNLAAPGIITVEEVQDNDGATNS 68 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +V + + A + T + + + +I R Sbjct: 69 SVVAADQTWTRLINAIGAAGGPTYTYQQTNPVDDQDGGEPGGNIRVGFLFRTDIGLTFAS 128 Query: 127 SYPLLG-------------------------AKDSFSRAGNRRAVELLVEINGKKIWVLD 161 P + + +R+ + N K + V+ Sbjct: 129 GTPGGSTTAVAVSDSGNPADRVNLSVNPGRIDPTNSAFNASRKPLVGKFYFNSKPLLVIA 188 Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215 H S D L Y P S + +QQA +++++ +S V+AGD N Sbjct: 189 NHWNSKGGDDPLFGRYQPPALTSETQRNQQATVVRNFVQSILAIDSQARIVVAGDLNDFP 248 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 +T+ D+ N +D+ ++ Sbjct: 249 YSAPV-----QTLTSAGLTDLPATLADAERYTYVYDGNSQVLDHILLSAALAGAAHSYDV 303 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + SDH P Sbjct: 304 VHVNSEFATQQ------SDHDPQVARLT 325 >gi|182677440|ref|YP_001831586.1| exodeoxyribonuclease III Xth [Beijerinckia indica subsp. indica ATCC 9039] gi|182633323|gb|ACB94097.1| exodeoxyribonuclease III Xth [Beijerinckia indica subsp. indica ATCC 9039] Length = 272 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 30/306 (9%), Positives = 76/306 (24%), Gaps = 64/306 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + L +WNIN L+ ++ D++ LQE Sbjct: 3 LSLATWNIN----------------SVRLRIDLVTRFLTEQAPDVLCLQETKCR------ 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + +L + + +A+ K D+ Sbjct: 41 ---DSEFPLAAFHKLGYSHIAINGQKGYHGVAIVSKIPFAESGKRDFCAKGDARHITVTL 97 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + I + + ++ + D + +P + + +W+ + Sbjct: 98 LPE----TTPARPINLHNFYVPAG--GDEPDPEINPKFAHKLAFLDEMAEWMRTDLIAHR 151 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 +I GD N + + + I+ + Sbjct: 152 DAIIVGDLNIAPLETDVWSHKALLKVVSHTPIEVEKLGRVINAGPWIDALRHHVPPEEKL 211 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + + L + R SDH P Sbjct: 212 YTWWSYRSPDWSKADKGRRLDHIWVSASLKQHLDGLTI-------LRDSRGWDRPSDHVP 264 Query: 298 ISIDYD 303 +++ + Sbjct: 265 VTVQLN 270 >gi|167622812|ref|YP_001673106.1| endonuclease/exonuclease/phosphatase [Shewanella halifaxensis HAW-EB4] gi|167352834|gb|ABZ75447.1| Endonuclease/exonuclease/phosphatase [Shewanella halifaxensis HAW-EB4] Length = 377 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 46/365 (12%), Positives = 106/365 (29%), Gaps = 84/365 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + +++L S+N+ E S ++ L + D++ QE+ S Sbjct: 10 SNRLKLASFNLFNYIEPPLAYYDFENIYSKEQWHKKQRWLADFLARHQPDVIGFQEVFSA 69 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR---KKNVRVLQQSYPLLGAK 134 +A+A+ + + ++ D +A + ++ V + S G Sbjct: 70 DALAQQMSEAGYK-HFAVVDSPTIIDDYICRDPVVGLASKFAFEEVVSIEVDSQYAAGLG 128 Query: 135 DSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCF------------------------ 169 + + A +R+ + V++ + + +H KS Sbjct: 129 LNQNFAYSRKPLRATVQLPQIGLCDIYVVHFKSKRPHLDELPQPKFTQTANRSSAAPLVN 188 Query: 170 -----LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL------ 218 + ++ S S+ A + ++ E+ P V+ GDFN +++ Sbjct: 189 FGELLGRNSLGQWASSIQRGSEAALLFHAMLQRRIETNQPMVLMGDFNDELSSSVLSALT 248 Query: 219 --------------------GNNDDFWKTIDPNDSLIRFPKE---------------KDS 243 F + + + K + S Sbjct: 249 TRELRFEKEGLGELANFPLTDAYKLFQQGLLDLFGVETADKNLDDVAVEEELMQAKVRAS 308 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI------KSRGKRLSDHCP 297 R + + +DY ++ + + Y+ +D R SDH P Sbjct: 309 RTPTHYYGASGNVLDYILLSADFDPSYHKSIAEVCDYHTEDRHLVNPSFERDSHSSDHAP 368 Query: 298 ISIDY 302 + Sbjct: 369 VICTL 373 >gi|86138642|ref|ZP_01057215.1| exodeoxyribonuclease III [Roseobacter sp. MED193] gi|85824702|gb|EAQ44904.1| exodeoxyribonuclease III [Roseobacter sp. MED193] Length = 268 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 85/306 (27%), Gaps = 65/306 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ S+NIN + L Q+ D+V LQE+ S + + Sbjct: 1 MKIASFNING----------------IKARAAALPQWLDEAKPDVVVLQEIKS---IDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + ++ +A+ K G R Sbjct: 42 FPRELF-------EERGYNVETHGQKGFNGVAILSKLPLEDVSR----GLPGDEDDLQAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFL---DSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 ++ + + + ++L + + D + + L E Sbjct: 91 WIEATVI--GKQALRICGLYLPNGNPVELTDEGSPVPGGKYAYKLAWMERLHARAQDLLE 148 Query: 201 SLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 S +P ++AGD+N + + ++ I F Sbjct: 149 SEMPALMAGDYNIIPQAEDAKRPEAWREDALHRPESRAAYQRIVNLGFTEAFRARHQGPG 208 Query: 246 NANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + ID+F++ A L D + SDH P Sbjct: 209 HYSFWDYQAGAWNRDDGIRIDHFLLSPQAADLLQDCQI-------DKEIRGRDKPSDHVP 261 Query: 298 ISIDYD 303 I +D D Sbjct: 262 IWVDLD 267 >gi|83949536|ref|ZP_00958269.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius nubinhibens ISM] gi|83837435|gb|EAP76731.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius nubinhibens ISM] Length = 340 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 43/341 (12%), Positives = 91/341 (26%), Gaps = 63/341 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSD--------YTLLRQYAKNLDADIVFLQEMG 75 +R+ ++NI + ++ + L AD + + E Sbjct: 1 MRIATYNIEWFNALFDDDGELIDDDGWSARHNITRSQQTEAVGIVLTALKADAIMIVEAP 60 Query: 76 SYNAVA---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 N + + + S ++ A+ + V Sbjct: 61 DQNRQRSTVRALEGFAYRMGLSAR--KAVLGFENETQQEIALLYDPDKLSVRHDPIGEET 118 Query: 133 AKDSFSRAGN-RRAVELLVEIN---------------------GKKIWVLDIHLKSFCFL 170 K + A A + ++I+ G ++ +HLKS Sbjct: 119 GKRGSADAPRFDGAFRIDLDIDAKEDIVTFSKPPIELAVETATGTAFRMIGVHLKSKAPH 178 Query: 171 DSLENTYS-----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 + + + QA WL+ I + ++ GD N D F Sbjct: 179 GATNREAAMRIGIANRRKQLAQAVWLRQRIDGHLAAGETLMVMGDMNDGPGLDEYEDLFG 238 Query: 226 K-----TIDPNDSLIRFPKEKDSRCN----ANKNLRNKIP---------IDYFVMDQNAY 267 + + + + P + + R P +DY ++ + Sbjct: 239 RSSVEILLGEGEGALYDPHARAALTRKLGAIYSTSRFYQPETGRYMQALLDYIMVTRGLR 298 Query: 268 KFLIQESFSEILYNED-----DIKSRGKRLSDHCPISIDYD 303 + + D ++ SDH P++ID D Sbjct: 299 ERGAAWRIWHPFDDPDCWNLPELSRALLTASDHYPVTIDLD 339 >gi|254523139|ref|ZP_05135194.1| exodeoxyribonuclease III [Stenotrophomonas sp. SKA14] gi|219720730|gb|EED39255.1| exodeoxyribonuclease III [Stenotrophomonas sp. SKA14] Length = 260 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 85/304 (27%), Gaps = 73/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N+L+ L Q+ K DIV +QE Sbjct: 1 MKIASWNVNSLN----------------VRLPHLEQWLKAFGPDIVGIQET--------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + + + +A+ + + G +D R Sbjct: 36 -KLEDHKFPDSALIAAGYRSVFAGQKTYNGVALLSREP-AQDVQIGIPGFEDEQKR---- 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + V+++++ + + + + Y + + + WI ++ + Sbjct: 90 -----VIAGTFGDLRVINLYVVNGQDIGTDKYDYK------LRWLEAVHAWIAEELQRHP 138 Query: 204 PFVIAGDFNRKINYLGNNDD-FWKTID--------------PNDSLIRFPKEKDSRCNAN 248 ++ GDFN + +D W L + + Sbjct: 139 KLIVMGDFNIAPDARDVHDPEVWNENHILTSTAERGALNKLLQLGLHDGFRLHNDEAGTF 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID ++ + D +R SDH P Sbjct: 199 SWWDYRAAGFRRNLGLRIDLTLVSDALKGSAVASGI-------DREPRTWERPSDHAPAW 251 Query: 300 IDYD 303 ++ + Sbjct: 252 VEVE 255 >gi|163119479|ref|YP_079289.2| hypothetical protein BL01872 [Bacillus licheniformis ATCC 14580] gi|145902986|gb|AAU23651.2| hypothetical protein BL01872 [Bacillus licheniformis ATCC 14580] Length = 241 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 37/290 (12%), Positives = 85/290 (29%), Gaps = 58/290 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------ 76 K ++++NI+ ++ D DI+ L E+ Sbjct: 2 KFSIMTFNIHHGKGRDR-----------RVDLGRTAGVIAQSGCDIIGLNEVDRHFSNRS 50 Query: 77 --YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + ++ + + ++ S DS+ A+ + ++ + Sbjct: 51 DYEDQIGRLAEQLNMHY--AYCPSLSLSSGDSSEKRQYGNALLTRFPIKKERHH---SFN 105 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R +E V I + V HL +L + + Sbjct: 106 FVKGLIEGRSLLEADVRIGDRLFRVFVTHLSLNPWLHGKQTDF----------------L 149 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 I + +ES +P ++ GDFN K G + + + + + + R + Sbjct: 150 IEKVQESDLPVIVTGDFNMKPYSRGWKKV------AEKLADLWDESQYGQGFTHPSHRPR 203 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +DY + + + + + SDH P+ + Sbjct: 204 RRLDYIFLSPSFHVSAAEIVAVDPN------------ASDHLPLKGSITY 241 >gi|91225419|ref|ZP_01260541.1| hypothetical protein V12G01_08830 [Vibrio alginolyticus 12G01] gi|91189782|gb|EAS76055.1| hypothetical protein V12G01_08830 [Vibrio alginolyticus 12G01] Length = 317 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 105/312 (33%), Gaps = 30/312 (9%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 S ++ V+ N+ S+++ + ++ + L+ D++ LQE+ Sbjct: 2 SQPSRITFVTANLFNFVAPPNAYYDFENIYSLEQWRDKLSWTQRQVEKLEGDVIGLQEVF 61 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLG 132 S F + +++T + + AIA R +V + L Sbjct: 62 SIEKTQAFFSTIGYP-YFATVDTPHVEDEYIYSSPVVAIASRFPIEKVQAVEFDLATLEP 120 Query: 133 AKDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLDSLENT-------YSPSCSLL 184 S + +R+ + ++ I V HLKS DS + S Sbjct: 121 FGVSVAPEFSRKPIYAQVIHPVLGHIAVYVTHLKSQRPADSEQPETSSTIIGRWLSTQQR 180 Query: 185 SQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--------NDSLI 235 +A L+D + + ++ +P V+ GD N+ I + N + L+ Sbjct: 181 GWEAAMLRDAMQKRYRKEPMPTVLMGDMNQPITPISVNSALVSNTGDSVTELQLKDGWLL 240 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRG 289 + KD R + + +DY ++ Q + Y + R Sbjct: 241 QSAPLKDERPATHYHFSTGNVLDYILLSQEFDTLSDISVAEVVDYQVSNQHLINPIYDRD 300 Query: 290 KRLSDHCPISID 301 K SDH +++ Sbjct: 301 KNASDHAFVALT 312 >gi|107028675|ref|YP_625770.1| exodeoxyribonuclease III (xth) [Burkholderia cenocepacia AU 1054] gi|116690166|ref|YP_835789.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia HI2424] gi|105897839|gb|ABF80797.1| Exodeoxyribonuclease III [Burkholderia cenocepacia AU 1054] gi|116648255|gb|ABK08896.1| Exodeoxyribonuclease III [Burkholderia cenocepacia HI2424] Length = 258 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 31/300 (10%), Positives = 80/300 (26%), Gaps = 68/300 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + D++ LQE Sbjct: 1 MKIATWNVNSLN----------------VRKQHVLDWLAQSGTDVLCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + +A+ + L + + Sbjct: 35 LKLPDEKFPRADLEAVGYRSWFTGQKTYNGVAILVR--DTLAVDESDVVRNIPGFDDPQQ 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V+ + ++ + + LDS + Y Q L+ W+ + + Sbjct: 93 RVIAATVD----GVRIVSAYFPNGQALDSDKFVYK------MQWLDALQAWLRTELQRYP 142 Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249 + GD+N +D + P + + + Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLIELGFVDAFRRFEQPEKTFT 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ D + ++ SDH P+ Sbjct: 203 WWDYRMMAFRRNAGLRIDHILLSPALAATCASCEV-------DRVPRTWEQPSDHTPVVA 255 >gi|149926852|ref|ZP_01915111.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Limnobacter sp. MED105] gi|149824404|gb|EDM83622.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Limnobacter sp. MED105] Length = 266 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 33/310 (10%), Positives = 79/310 (25%), Gaps = 74/310 (23%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 A ++L +WN+N+L L Q+ + D++ LQE Sbjct: 4 SAANIQLATWNVNSL----------------KVRLPHLLQWLEGNPVDLLGLQE------ 41 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN---VRVLQQSYPLLGAKDS 136 + + + + +A+ K + L D Sbjct: 42 ----LKLTDENFPLTELEAAGYGAVYAGQKTYNGVAILYKKATMPEPVDVQVNLPSFPDE 97 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R ++ + + ++ + + S + Y + L Sbjct: 98 QKR---------VIAATFGDLRFISAYVVNGSEVGSDKFEYKKA------WLDALLKDCD 142 Query: 197 QKKESLVPFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKD 242 + GD+N + +D + + +D L+ + + Sbjct: 143 AWLAQYPKLALVGDYNIAPDDRDVHDPKAWAGQVLCSDDERGRFNTLLDMGLVDSFRLFE 202 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 ++ ID+ ++ + + D + ++ S Sbjct: 203 QPEKTFSWWDYRMLGFQKNKGLRIDHVLLSKPLAERCTASVI-------DRAPRKWEKPS 255 Query: 294 DHCPISIDYD 303 DH P Sbjct: 256 DHAPAVATLS 265 >gi|52785878|ref|YP_091707.1| hypothetical protein BLi02127 [Bacillus licheniformis ATCC 14580] gi|52348380|gb|AAU41014.1| conserved hypothetical protein [Bacillus licheniformis ATCC 14580] Length = 243 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 37/290 (12%), Positives = 85/290 (29%), Gaps = 58/290 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------ 76 K ++++NI+ ++ D DI+ L E+ Sbjct: 4 KFSIMTFNIHHGKGRDR-----------RVDLGRTAGVIAQSGCDIIGLNEVDRHFSNRS 52 Query: 77 --YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + ++ + + ++ S DS+ A+ + ++ + Sbjct: 53 DYEDQIGRLAEQLNMHY--AYCPSLSLSSGDSSEKRQYGNALLTRFPIKKERHH---SFN 107 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R +E V I + V HL +L + + Sbjct: 108 FVKGLIEGRSLLEADVRIGDRLFRVFVTHLSLNPWLHGKQTDF----------------L 151 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 I + +ES +P ++ GDFN K G + + + + + + R + Sbjct: 152 IEKVQESDLPVIVTGDFNMKPYSRGWKKV------AEKLADLWDESQYGQGFTHPSHRPR 205 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +DY + + + + + SDH P+ + Sbjct: 206 RRLDYIFLSPSFHVSAAEIVAVDPN------------ASDHLPLKGSITY 243 >gi|257069696|ref|YP_003155951.1| Exodeoxyribonuclease III [Brachybacterium faecium DSM 4810] gi|256560514|gb|ACU86361.1| Exodeoxyribonuclease III [Brachybacterium faecium DSM 4810] Length = 266 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 82/306 (26%), Gaps = 67/306 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WNIN+L + + + + D D++ LQE + Sbjct: 1 MRIATWNINSL----------------RARMDRVLAFLERHDVDVLALQETKAK------ 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + +A+ + ++ G Sbjct: 39 ----PQQLDLTALQEAGYEVAAHGLNQWNGVALISRVGLSDVRTELPALPLWPEDETGVV 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202 A L + + + +++ + LD Y + + L+ ++ Sbjct: 95 EARALGGLVGDG-LRIWSLYIPNGRELDHPHYDYK------LRWLEALRAEGARELAEDL 147 Query: 203 -VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + GDFN + ++ + + Sbjct: 148 SAKVALVGDFNVAPLDEDVWDMEFFDGKTHVSEPERAAFRAVVDAGYADVVRGDHPGP-G 206 Query: 247 ANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ + + + D + +GK SDH P Sbjct: 207 VYTYWDYQQLRFPKRQGMRIDFVLGSPSVQSAVTGSFI-------DREERKGKGASDHAP 259 Query: 298 ISIDYD 303 + +D D Sbjct: 260 VVVDLD 265 >gi|90022485|ref|YP_528312.1| extracellular nuclease-like protein [Saccharophagus degradans 2-40] gi|89952085|gb|ABD82100.1| Endonuclease/exonuclease/phosphatase [Saccharophagus degradans 2-40] Length = 945 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 95/354 (26%), Gaps = 74/354 (20%) Query: 15 PCTASVAQKVRLVSWNINTLSEQ----------EGVSLWKNSVKRTTSDYTLLRQYAKNL 64 S+ +++ S+N+ +S+ L Q + Sbjct: 498 TAAPSIDGNLKITSFNVLNFFATIDESGVVTMAGHDPRGADSIAERDRQLAKLTQAILAM 557 Query: 65 DADIVFLQEMGSY---------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 DAD+V L E+ + N+V V + + + + Sbjct: 558 DADVVGLVELENEFDNVNDGSTAIEMLVNSVNAVAGETLYDYAFPGSSFVGTDAIAVGVI 617 Query: 110 IHTAIAVRKK------NVRVLQQSYPLLGAKDSFSRAG------NRRAVELLVEI--NGK 155 A+ + + Q+ PL +D + NR ++ + + + Sbjct: 618 YKPAVVQLAEGTVPALLEDSVAQTLPLFAGRDFATNPLFNGVATNRVSLAVSFTHLESKE 677 Query: 156 KIWVLDIHLKS----FCFLDSLENTYSPSCSLLSQQ-----AQWLKDWITQKKES--LVP 204 V+ H KS S N + Q AQ + W+ Sbjct: 678 SFTVVANHFKSKGSSGLTDSSDANFDKNDGAGFWNQRRLEAAQAVIAWLQTSPTGLVDSD 737 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 +I GD N + + +S + +DY ++ Sbjct: 738 QIILGDLNAYAAEEPIQYLLAEGFNNVESEH---------AYSYVFDGQVGTLDYLLVSD 788 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRL---------------SDHCPISIDYD 303 + ++ L + +E D SDH P+ + ++ Sbjct: 789 SLFEKLTAAQVWNVNADEADAIDYNLDYGRSASYFDASVAARNSDHDPVLVGFE 842 >gi|95930349|ref|ZP_01313086.1| exodeoxyribonuclease III [Desulfuromonas acetoxidans DSM 684] gi|95133601|gb|EAT15263.1| exodeoxyribonuclease III [Desulfuromonas acetoxidans DSM 684] Length = 270 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 33/312 (10%), Positives = 80/312 (25%), Gaps = 75/312 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+N+N L + + ++ D++ LQE ++ Sbjct: 1 MKIISFNVNGL----------------RARHHQVKAVIDTYQPDVLALQETKVHDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + R H +A+ + V Q R Sbjct: 41 ------QFPLAEVESLGYEVRYYGQKGHYGVALLSRQAPVDVQ-----YGFVDDDDEAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++ F +++ + + L+ + + Sbjct: 90 RLIVGRYAFGDQMVTVVN-----GYFPQGENRSHAVKFPAKEKFYRDLRQMLENYEAKND 144 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N +L + +++ F Sbjct: 145 ALLVVGDMNVAPLAEDIGIGPDNEKRWLAQGKSCFLPEERAWLQSVMDWGLHDSFRHCYP 204 Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + Q D ++ Sbjct: 205 DVDDRFSWFDYRSRGFERDPKRGLRIDLILASQALISRCQDAGI-------DYDIRAMEK 257 Query: 292 LSDHCPISIDYD 303 SDHCPI ++ Sbjct: 258 PSDHCPIWAEFS 269 >gi|262273941|ref|ZP_06051753.1| endonuclease/exonuclease/phosphatase family protein [Grimontia hollisae CIP 101886] gi|262221751|gb|EEY73064.1| endonuclease/exonuclease/phosphatase family protein [Grimontia hollisae CIP 101886] Length = 348 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 90/336 (26%), Gaps = 51/336 (15%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWK---NSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 A A ++L + N+ E G S + L +Y + DI+ QE+ Sbjct: 11 AHSALGLKLATINLFNFIEPPGAYYEFCNIYSEDQWRQKRAWLNRYIGSYQPDIIAFQEV 70 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN---VRVLQQSYPLL 131 S +A+ + + F++ + +A R + + Sbjct: 71 FSASALKALLEPLGYR-FFAVVDEPEPLEEYIYKSPVVCLASRYPILSALPLQADPAVSA 129 Query: 132 GAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSP--------SCS 182 +R + +E+ + + +HLKS + S Sbjct: 130 KLGIHEHFQFSRLPLFATLELPSLGQTDMYVVHLKSKRPVMDEVTEDSEPKKLADSMQEE 189 Query: 183 LLSQQAQWLKD----------WITQKKESLVPFVIAGDFNRKINY--------------- 217 + A ++ I ++ + P ++ GDFN + Sbjct: 190 IFGSWASAIQRGSEACHLMSSVIKRRSHTNNPAIVMGDFNDDLRSEVLRAFHISGLRSIT 249 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRC----NANKNLRNKIPIDYFVMDQNAYKFLIQE 273 D +DS + K + +DY ++ Sbjct: 250 DDMADMPLSHYQLHDSWDLYTKNMGETALERPATHYFHAKGAVLDYILLSSEFNSADPVS 309 Query: 274 SFSEILYNEDDIK------SRGKRLSDHCPISIDYD 303 ++ +D SDH +S+ Sbjct: 310 LAEVGDFHCEDTHLVNPKYDHDTYSSDHAIVSVTIS 345 >gi|237749180|ref|ZP_04579660.1| endonuclease/exonuclease/phosphatase [Oxalobacter formigenes OXCC13] gi|229380542|gb|EEO30633.1| endonuclease/exonuclease/phosphatase [Oxalobacter formigenes OXCC13] Length = 264 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 91/300 (30%), Gaps = 60/300 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA- 81 ++R+ ++NI+ + + + L++ ++L AD++FLQE+ + + Sbjct: 2 ELRIATYNIHKGASIDHRPI-----------IQELKRSIRSLGADVIFLQEVQGRHDLQV 50 Query: 82 ----KVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 ++ + + + + L + K N H A+ V Q S Sbjct: 51 NRQALLWQEQGQHAYLAGDSLYCAYGKNSVYNYGHHGNALLSTYPIVSQ-----FNQDVS 105 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 +R + +++ K++ IHL F +Q + L + Sbjct: 106 DHALESRGILHCVLQTPETKVYCYVIHLGLFNGS-------------RIRQTRALIRTVQ 152 Query: 197 QKKESLVPFVIAGDFNRK-------INYLGNNDDFWKTID--PNDSLIRFPKEKDSRCNA 247 P +IAGDFN + + + +D N FP+ Sbjct: 153 ASAPKDAPVIIAGDFNDWNNKLSGFLMRTLQVKEVFDELDMKQNGKRSYFPRLTGQVPKP 212 Query: 248 NKNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + F + LSDH P+ Sbjct: 213 VAARTFPALFPFFRLDRIYVRG----------FEVDSASVMQGSP-WTSLSDHAPLVASL 261 >gi|86747929|ref|YP_484425.1| 5'-nucleotidase [Rhodopseudomonas palustris HaA2] gi|86570957|gb|ABD05514.1| 5'-nucleotidase [Rhodopseudomonas palustris HaA2] Length = 2667 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 41/344 (11%), Positives = 87/344 (25%), Gaps = 68/344 (19%) Query: 21 AQKVRLVSWNINTLSEQ----------EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 +++ +N+ + ++ T L + +D D++ Sbjct: 626 GGSLKVAGFNVLNYFKTLDIGSATTVIGEDPRGADTAAELARQTTKLVETILKMDVDVLA 685 Query: 71 LQEMGSY-------NAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVR 122 L E+ + NA+ + + T +N ++ D I R +V+ Sbjct: 686 LTELENDFLPGSSGNAIEYLVAQLNAEAGAGTYAWVNPGQQFVGGDAIAVGFIYRTADVK 745 Query: 123 VLQQSY-------------------PLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLD 161 + + +R A+ + E G+ + Sbjct: 746 IADGTTVEILNDSDLPGLGLSGLLSQSTVGHIFDGENTSRNALAVTFEQISTGETFTAIA 805 Query: 162 IHLKSFCFLDSLENTYSPSCS-----LLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRK 214 HLKS + + L W ++ GDFN Sbjct: 806 NHLKSKSGTGTGADADQGDGQGNWQNQRELATVALTAWAQSDPTGSGDSDVLLLGDFNGY 865 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 ++ ++ + +DY + + + + Sbjct: 866 AKEQSIG-----LLEDAGYENLQTRQ--DDAYSYVFDGQTGTLDYAFANDSMGSQVTGVT 918 Query: 275 FSEILYNEDDIKSRG---------------KRLSDHCPISIDYD 303 I +E D R+SDH P+ I D Sbjct: 919 TWHINADEADALDYNTDYGRDTAIFDGTEPVRVSDHDPVIIGLD 962 >gi|332184956|ref|ZP_08386705.1| endonuclease/Exonuclease/phosphatase family protein [Sphingomonas sp. S17] gi|332014680|gb|EGI56736.1| endonuclease/Exonuclease/phosphatase family protein [Sphingomonas sp. S17] Length = 231 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 78/280 (27%), Gaps = 54/280 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ S+NI K + + + +DADIV LQE + Sbjct: 2 IKVASYNIR-----------KGIGADRRRNPDRILDVLREVDADIVALQEADRRFGEREG 50 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 +S + I + + + H + VRK + ++ L Sbjct: 51 VLPLHLIEDHSDWKPIIYGMKARSLGWHGNTLLVRKSTRVLDFEAIHLPSL-------EP 103 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R AV + + + ++ +HL S +QA + + Sbjct: 104 RGAVMADLSTDAGILRIVGMHLDL-------------SGLWRRRQAGAILSHLASCL-HQ 149 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 P V+ GD N G DF + + R +D ++ Sbjct: 150 HPTVMMGDLNEWTRGAGCLRDFARDFT-----------FADTGPSFHARRPIGRLDRIMV 198 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ++ SDH PI Sbjct: 199 SPELRVMACGVHA----------SATSRKASDHLPIWAKI 228 >gi|330960376|gb|EGH60636.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 261 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 41/296 (13%), Positives = 88/296 (29%), Gaps = 52/296 (17%) Query: 15 PCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 P T A + +++ N++ LR+ +++ ADIVFLQE Sbjct: 10 PVTPVSASVSLNVLTMNMHMGFGIFNRRF----------ILPELREAVRSVSADIVFLQE 59 Query: 74 MGSYNAVA----KVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQS 127 + K +P + F + + + + D A+ K + ++ Sbjct: 60 VHGEQQSHARSVKGWPTISQYEFLADAMWSDFAYGRNAVYPDGDHGNALLSKYPIIQHEN 119 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 + R + ++++ V + + F S QQ Sbjct: 120 LDISIDG-----TEQRGLLHCILDVPNAG-RVHAVCVHLGLF-----------ESHRRQQ 162 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + L + + + P ++AGDFN + F + + + Sbjct: 163 LKLLAELMAR-LPEGEPVIVAGDFNDWRQRAD------ALLQGTGLYEVFVEHFGAPAKS 215 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +D + + S LSDH P++++ Sbjct: 216 FPARLPLLRLDRVYVRNSTSHRPKVLS-----------SRPWSHLSDHAPLAVELT 260 >gi|327541485|gb|EGF28020.1| Endonuclease/exonuclease/phosphatase [Rhodopirellula baltica WH47] Length = 358 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 40/346 (11%), Positives = 93/346 (26%), Gaps = 45/346 (13%) Query: 1 MIRKYVLALVFFLVPCT-----ASVAQKVRLVSWNINTLSEQEGVSLWK--------NSV 47 M ++LAL + + A + +++WN+ + + S Sbjct: 11 MRLLFLLALTWHFISGFGSVAIAQQPAEFSVMTWNLEWFFDNQTADNPSELGREKSAPSR 70 Query: 48 KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107 + + + +V LQE+ S N + + + + D Sbjct: 71 GQWDWRRDRVAAAIAKVQPTVVALQEIESQNVMYFLTRAIDRNHGLKYDDYV-IKGEDFY 129 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKS 166 + A+ + + S A + + +VEI K +L I Sbjct: 130 TEQDVALLATTTTGVQSISRGVVTPSMKSRGYASVSKHLFAVVEIPVNGKTELLVIANCH 189 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWIT---QKKESLVPFVIAGDFNR-----KINYL 218 + + L + + + + + V ++ GDFN KI+ Sbjct: 190 LRAMAEKGELRAKQARTLGLWLERMVAGVKASQENPDQPVHVLVTGDFNTEELAGKISPD 249 Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-IDYFVMDQNA---YKFLIQES 274 + + + S D ++ ++ ++ S Sbjct: 250 SDLGVLMSRGNDDPSDDLVDLHDYIPAQNRTTHLLPGRQFDRILVSRDLVIDTPGVVDLS 309 Query: 275 FSEILYNEDDIK------------------SRGKRLSDHCPISIDY 302 ++ D + +SDH P+ + Sbjct: 310 LRDVTVRSDLNFGGDQDTQDEHWNNYWGIADDQRDISDHNPVLARF 355 >gi|326798886|ref|YP_004316705.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] gi|326549650|gb|ADZ78035.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] Length = 378 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 98/309 (31%), Gaps = 63/309 (20%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + +R++++N++ +++ K T + + ++ DIV +QE + Sbjct: 108 PDSSSIRVLTYNVHLFRKEDQDVRPKTK--------TAVTELILSVSPDIVCMQEFYTRK 159 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 +N + + + + + + S P K + + Sbjct: 160 KGKYNSRQNMAPALGLSYSYFHPVVENEY--EAYGLIILSRYPIKNAGSIPNYQGKRTLN 217 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE-----------------------N 175 R A+ + NG+ V +IHL+S F + Sbjct: 218 R-----AIYADIVKNGRAFRVYNIHLQSIGFQPQDYAFVKDVKSRSFENDNVASTKRIGS 272 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 + S+QA+ +K+ I + ++ P +I GDFN + + L Sbjct: 273 RLKHAFFERSEQAKRIKEEINRCRK---PVIITGDFNDTPLS-------FAVHTVSSDLN 322 Query: 236 RFPKEKDSRCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 ++K + N IDY + + + + K+LSD Sbjct: 323 NSFEKKGAGWGITYNGEFPNFQIDYILSSK--------------TFEVKHYQILKKKLSD 368 Query: 295 HCPISIDYD 303 H + D Sbjct: 369 HYAVWSDLS 377 >gi|323344686|ref|ZP_08084910.1| hypothetical protein HMPREF0663_11446 [Prevotella oralis ATCC 33269] gi|323093956|gb|EFZ36533.1| hypothetical protein HMPREF0663_11446 [Prevotella oralis ATCC 33269] Length = 270 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 92/314 (29%), Gaps = 75/314 (23%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 Y+L +F +P + AQ+++++++NI + + + N Sbjct: 7 YILTALFLALPFIGN-AQELKIITFNIRSFEPDFNTQPY--------------AELLWNE 51 Query: 65 DADIVFLQEMGSYNAVAK-----------------VFPKNTWCIFYSTERLINHSKRDSN 107 D+V L E+ + ++ + +F + S + N + Sbjct: 52 KPDVVCLNEVENRSSRQQFDGKYRDVVQDLANRIHLFGLFGYSYNLSNKDGKNPEENYKY 111 Query: 108 -NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLK 165 + A+ + + + L S A R V + + GK I V HL Sbjct: 112 CENELYGNAILSRYPILNVSTIQLPRPTGS---ADQRGVVIADILLPEGKIIRVACTHLD 168 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 +QA L + K + P ++ GD N N Sbjct: 169 HVGG--------------QLEQAAVLTS--DEVKSNTYPTILCGDMNVGPNSDVIKKLL- 211 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 ++ L ID+ + + + D Sbjct: 212 ------------TVYDRLDNDSGTYLGL-SKIDFILGTKG--------KWELKSCKVLDR 250 Query: 286 KSRGKRLSDHCPIS 299 GK LSDHCP+ Sbjct: 251 HLNGKELSDHCPVV 264 >gi|294674945|ref|YP_003575561.1| endonuclease/exonuclease/phosphatase family protein [Prevotella ruminicola 23] gi|294472469|gb|ADE81858.1| endonuclease/exonuclease/phosphatase family protein [Prevotella ruminicola 23] Length = 364 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 84/311 (27%), Gaps = 69/311 (22%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 ++L+S+N+ + + + +Y DADIV LQE Sbjct: 93 SQTPPEGTIKLISYNVCQYGGNY----------KYEQGFEKVHEYLTEQDADIVCLQEDV 142 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + + + + + + + K + ++ P + + Sbjct: 143 DT------WRRYVKQWYEKIYPYNDTTIFNPQDACINGVGIHTKYPIIRKERIPYESSGN 196 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS--------------- 180 +++ + V++ HL+ + + Y Sbjct: 197 GSVAYF--------LQVGNDTVLVINNHLEGTHLSNEDRDKYKQMISGKMKKYTAKAETL 248 Query: 181 ---------CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 + + +A+ + D+I P ++ GDFN Sbjct: 249 FLIEKLGKYAAKRAPEAEAVHDYIEAH--RHYPIIVCGDFNDNPISYSRRTI------AQ 300 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + + ID+ ++ + F + D Sbjct: 301 GLTDCYQETGKGIGLSYNQKGFFVRIDHILVSDH---------FEPYNCHIDSKMD---- 347 Query: 292 LSDHCPISIDY 302 SDH PI Sbjct: 348 ASDHNPIICTL 358 >gi|255035926|ref|YP_003086547.1| exodeoxyribonuclease III Xth [Dyadobacter fermentans DSM 18053] gi|254948682|gb|ACT93382.1| exodeoxyribonuclease III Xth [Dyadobacter fermentans DSM 18053] Length = 260 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 72/304 (23%), Gaps = 70/304 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +R+ ++N+N ++ +L ++ D+V LQE Sbjct: 2 NAMRIATYNVNGVNG----------------RLPVLLRWLTETTPDVVCLQE-------- 37 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + +A+ + + L G + Sbjct: 38 --LKAPQEKFPEQAILEAGYKAIWHGQKSWNGVAILSRGDIPAEIRRVLPGDPEDAHSRY 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E + V ++L + + Y + L + Sbjct: 96 --------IEAEIGGLTVGGLYLPNGNPAPGPKFDYK------LRWFDRLITHAQGLLAA 141 Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246 P ++ GDFN L + + Sbjct: 142 GKPVLLTGDFNVMPTELDVYKPESWVDDALFRPETRAAFAKLMDQGWTDAIRTLYPDEKI 201 Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+F++ N LI D ++ SDH P+ Sbjct: 202 YTFWDYFRNAFARNAGLRIDHFLLSPNLAPRLIAAGV-------DKQVRGWEKTSDHAPV 254 Query: 299 SIDY 302 I+ Sbjct: 255 WIEL 258 >gi|229820664|ref|YP_002882190.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM 12333] gi|229566577|gb|ACQ80428.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM 12333] Length = 269 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 32/291 (10%), Positives = 68/291 (23%), Gaps = 34/291 (11%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +R++++NI V+ W + D+V LQE+ S+ Sbjct: 5 QGTPLRVMTFNIKYDDAASPVAAWAPRRAAVAATIR-------AAAPDVVGLQEVQSHQL 57 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + A + P + ++ + Sbjct: 58 ADLRADLPEYEAVGVGRDDGAAGGEHVPLLVRRAAWRIAEWGTFWLSETPAVPSRFA-GT 116 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R ++E I + + + + ++ + Sbjct: 117 TFPRTCTWAVLEPVDGAGRAGSIGVWNVHLDHESTDAQAFGLRVVLDAVRE--------- 167 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL-------R 252 VP V+ GD N D P + Sbjct: 168 RGDVPAVVLGDLNAGPRTEPLAVVAGALHDARTRSRTAPTGPGGTFHDWVPDAVADTAGD 227 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ID+ ++ + Y+ SDH P+ +D Sbjct: 228 DDSRIDHVLVSDA---------VGVVAYDVPVPGPGVVP-SDHLPVVVDLT 268 >gi|170694716|ref|ZP_02885867.1| exodeoxyribonuclease III Xth [Burkholderia graminis C4D1M] gi|170140347|gb|EDT08524.1| exodeoxyribonuclease III Xth [Burkholderia graminis C4D1M] Length = 258 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 83/304 (27%), Gaps = 72/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 +++ +WN+N+L + + + D++ LQE+ Sbjct: 1 MKIATWNVNSL----------------KVRQQHVIDWLETSGTDVLCLQELKLPDEKFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +++ ++ N I VR + D + Sbjct: 45 AELEEKGYRSWFAGQKTYN----------GVGILVRAGLNVDEASVVRNIPGFDDLQQR- 93 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 V VE + ++ + + + + Y + L DW+ + Sbjct: 94 ---VVAATVE----GVRIISAYFPNGQAPGTDKFAYK------LRWLAALHDWVKSEMAL 140 Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIR----------FPKEKDSRCNA 247 + GD+N + +D + P + ++ + Sbjct: 141 YPKLALLGDYNIAPDDRDVHDPKAWEGQNLVSPEERAEFVRLIELGLVDAFRQFEQPEKI 200 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ++ ID+ ++ + + D + + + SDH P+ Sbjct: 201 YSWWDYRMMAFRRNAGLRIDHILLSKALAETCASCEV-------DKVPRKWDQPSDHAPV 253 Query: 299 SIDY 302 Sbjct: 254 VAQL 257 >gi|16127936|ref|NP_422500.1| exodeoxyribonuclease III [Caulobacter crescentus CB15] gi|221236757|ref|YP_002519194.1| exodeoxyribonuclease III [Caulobacter crescentus NA1000] gi|13425472|gb|AAK25668.1| exodeoxyribonuclease III [Caulobacter crescentus CB15] gi|220965930|gb|ACL97286.1| exodeoxyribonuclease III [Caulobacter crescentus NA1000] Length = 268 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 79/305 (25%), Gaps = 67/305 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N ++ D++ +QE+ Sbjct: 3 LRIATWNVN----------------SVRLRAEQAARFVDEQAPDVLCMQEIKCQEGE--- 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + + + +A+ + + Sbjct: 44 FPREAFEA------MGLPHLKIAGQKGWHGVAIASRLPIEDVPTLMTCREGH-------- 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + V++ G +I + D+ + +P + L + ++ + Sbjct: 90 -ARCVAVKVAGVEIQ----NFYIPAGGDTPDRIGNPKFDHKLDFYETLTAALKKR-DPKA 143 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N + + F I D L Sbjct: 144 PLIVTGDLNIAPGENDVWSHRQMLKVVSHTPPELEAFDALIKSMDLLDLPRLATPEPQKL 203 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + ++ D +R SDH P Sbjct: 204 FSWWSYRAADFRKSNRGLRLDHILASPGLRDAASLDG--KVSSRVHDDVREWERPSDHAP 261 Query: 298 ISIDY 302 ++ D Sbjct: 262 VTADL 266 >gi|254247764|ref|ZP_04941085.1| Exonuclease III [Burkholderia cenocepacia PC184] gi|124872540|gb|EAY64256.1| Exonuclease III [Burkholderia cenocepacia PC184] Length = 258 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 31/300 (10%), Positives = 79/300 (26%), Gaps = 68/300 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + D++ LQE Sbjct: 1 MKIATWNVNSLN----------------VRKQHVLDWLAQSGTDVLCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + +A+ + L + + Sbjct: 35 LKLPDEKFPRADLEAVGYRSWFTGQKTYNGVAILVR--DTLAVDESDVVRNIPGFDDPQQ 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V+ + ++ + + LDS + Y Q L+ W+ + + Sbjct: 93 RVIAATVD----GVRIVSAYFPNGQALDSDKFVYK------MQWLDALQAWLRTELQRYP 142 Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249 + GD+N +D + P + + + Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLIELGFVDAFRRFEQPEKTFT 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ D ++ SDH P+ Sbjct: 203 WWDYRMMAFRRNAGLRIDHILLSPALAATCASCEV-------DRTPRTWEQPSDHTPVVA 255 >gi|261408787|ref|YP_003245028.1| exodeoxyribonuclease III Xth [Paenibacillus sp. Y412MC10] gi|261285250|gb|ACX67221.1| exodeoxyribonuclease III Xth [Paenibacillus sp. Y412MC10] Length = 250 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 75/304 (24%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N L Y DADI +QE ++ Sbjct: 1 MKLVSWNVNGLRACVTKGFM---------------DYFNEADADIFCVQETKLQAGQIEL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S I + + S R Sbjct: 46 DLGPEYQQYWNYAEKKGYSGTAVFTRIA---------------PLSVRYGLEEDSEPEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++++++ + S + L + Sbjct: 91 -----VITLEFEGFYLVNVYTPNAKRDLSRLDYRLEWEERFRTYLLQL--------DERK 137 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + F R + Sbjct: 138 PVIVCGDLNVAHQEIDLKNAKSNHGNSGFTLEERGKMTDLLAAGFIDSFRHFYPDRTDVY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ + L + SDHCP+S Sbjct: 198 SWWSYMAKVRERNIGWRIDYFLTSARLAEKLKDAEIDCHVL-----------GSDHCPVS 246 Query: 300 IDYD 303 + + Sbjct: 247 LTLE 250 >gi|148653062|ref|YP_001280155.1| exonuclease III [Psychrobacter sp. PRwf-1] gi|148572146|gb|ABQ94205.1| Exodeoxyribonuclease III [Psychrobacter sp. PRwf-1] Length = 271 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 79/314 (25%), Gaps = 79/314 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAK 82 R VS+NIN + + +R D D++ LQE + + Sbjct: 3 RFVSFNINGIRAR-------------QHQLEAVRDII---DPDVMGLQETKVHDEQFPLE 46 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + H +A+ K + Q G D A Sbjct: 47 LVESLGYHV------------EFFGQKAHYGVALVSKVKPIFVQK----GFPDEPEDAQK 90 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + NG+++ VL+ F + + L +I K Sbjct: 91 RF-IHARYVFNGQEVDVLN-----GYFPQGESRNHETKFPMKRAYYADLNQYIDALKAEG 144 Query: 203 VPFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEK 241 +I GD N +++ + + + Sbjct: 145 RTLIIMGDMNIAPEDNDIGIGEKNAKRWLSQGKTSFLPEEREWYSALMSRELSDTYRIHY 204 Query: 242 DSRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ID+ + Q+ I + Sbjct: 205 PDANDTFSWFDYRSRGFDDDPKRGLRIDHILCTQDIEDKCIDAGI-------SYELRAME 257 Query: 291 RLSDHCPISIDYDF 304 + SDH PI + F Sbjct: 258 KPSDHAPIWASFKF 271 >gi|83718841|ref|YP_442378.1| exodeoxyribonuclease III [Burkholderia thailandensis E264] gi|167619376|ref|ZP_02388007.1| exodeoxyribonuclease III [Burkholderia thailandensis Bt4] gi|257138580|ref|ZP_05586842.1| exodeoxyribonuclease III [Burkholderia thailandensis E264] gi|83652666|gb|ABC36729.1| exodeoxyribonuclease III [Burkholderia thailandensis E264] Length = 258 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 84/304 (27%), Gaps = 72/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ +WN+N+L+ + + D D++ LQE + Sbjct: 1 MRIATWNVNSLN----------------VRKQHVLDWLAQSDVDVLCLQELKIPDEKFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +++ ++ N AI R + F Sbjct: 45 EALEAAGYRSWFAGQKTYN----------GVAILARASLPFDETDVVRNIPG---FEDTQ 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + ++ + ++ + + LDS + Y Q L+ W+ + + Sbjct: 92 QR-LIAATID----GVRIVSAYFPNGQALDSDKFVYK------MQWLDALQAWLKNELQR 140 Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNA 247 + GD+N +D + P + + D Sbjct: 141 YPKLALLGDYNIAPEDRDVHDPSKWEGQNLVSPQERAHFAQLVALGFVDAFRRFDQPEKT 200 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ++ ID+ ++ + + D ++ SDH P+ Sbjct: 201 FTWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTV-------DRAPRAWEQPSDHTPV 253 Query: 299 SIDY 302 Sbjct: 254 VAQL 257 >gi|227485102|ref|ZP_03915418.1| endonuclease/exonuclease/phosphatase family protein [Anaerococcus lactolyticus ATCC 51172] gi|227236935|gb|EEI86950.1| endonuclease/exonuclease/phosphatase family protein [Anaerococcus lactolyticus ATCC 51172] Length = 353 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 39/319 (12%), Positives = 96/319 (30%), Gaps = 64/319 (20%) Query: 23 KVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 ++++WNI G + S + + + K ++ D++FLQE+ Sbjct: 54 PYKILTWNIGYGGLDKDTDFFMDGGKMVNPISKDHVENALAGISKEIKTINPDLLFLQEV 113 Query: 75 GSYNAVAKVFPK---------------NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 + + + + + + + K +S + + Sbjct: 114 DADSQRTYHINEVEYFDKELNGASTFAFNYKVGFVPFPIPPMGKVNSGIFTKSKFEIESS 173 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 + + R N A L +E + K + ++++HL ++ + Sbjct: 174 YRYQQPVPHKWPVRLANLKRGFN--ASYLPIEGSDKYLVLVNVHLDAYESGSNG------ 225 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFW 225 Q + + ++T++ ++ GDFN+++ D Sbjct: 226 ----RLAQTKQIIAFMTEEYNKGNYLIVGGDFNQELRKGYEANVPEGIWNPSPFPYDYLT 281 Query: 226 KTIDPNDSLIRFPKEKDSRCNAN-KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 I P + N + ID F++ N ++ + Sbjct: 282 DNIKP--TFDENTNSSRLNHKPYDPNDSYECIIDGFLVSDNVEVKSVKGQAIGFVN---- 335 Query: 285 IKSRGKRLSDHCPISIDYD 303 SDH P+ +++ Sbjct: 336 --------SDHNPVLLEFS 346 >gi|254436254|ref|ZP_05049761.1| exodeoxyribonuclease III [Nitrosococcus oceani AFC27] gi|207089365|gb|EDZ66637.1| exodeoxyribonuclease III [Nitrosococcus oceani AFC27] Length = 254 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 89/304 (29%), Gaps = 76/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L ++ + + + D++ LQE V Sbjct: 1 MKIATWNVNSL----------------RVRFSQVVDWLEIHQPDVLALQE---TKLVDDS 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-VRVLQQSYPLLGAKDSFSRAGN 142 FP+ + + S + +A+ + + + P L Sbjct: 42 FPQEAFKEI-------GYHAAYSGQKTYNGVAILCRQAPKDILTDLPNLVDS-------Q 87 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 RR + + V+ I +L++++ + + S + Y +KD++ + Sbjct: 88 RRILGVTVD----DIRLLNLYVPNGSEVGSKKYAYKLD------WLGRIKDYLQEALVEY 137 Query: 203 VPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GDFN +D K I + + + Sbjct: 138 PKLIVLGDFNVAPADQDVHDPDIWHETILCSTPEREALKEILALG-FQDSFRLFEQEAQS 196 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID ++ + D R R SDH P+ Sbjct: 197 FSWWDYRGGAFRRNRGLRIDLILISKALVPKCTGCVI-------DKEPRRLTRPSDHAPV 249 Query: 299 SIDY 302 + Sbjct: 250 IATF 253 >gi|46127109|ref|XP_388108.1| hypothetical protein FG07932.1 [Gibberella zeae PH-1] Length = 309 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 83/305 (27%), Gaps = 17/305 (5%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M +LA + S VRL+++NI L+ + R + L Sbjct: 1 MRFDILLAGAVAVAAAPLSRTTDVRLMTYNIR-LAPNHPERGEELWPVRRPRLVSQLNFE 59 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 +V +QE +Y R + S ++ + + Sbjct: 60 TSGRPESLVCMQEATYPQIQDLQEDLGDEWDYYGVGRKGGNRGEFSPIFYRPSVWNMEDS 119 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 S P + A R + ++ + F + S Sbjct: 120 KTYWLSSTPHKVGSRGWDAAFPRIVTVARFQHISTGNRLVYMCTH---FDHKGKTARENS 176 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 L+S A+ + VP I GD N + D + + Sbjct: 177 AKLISATAEE----WSSYGFDNVPVFIGGDLNSSPDEPAYKHLASAMNDVKSIIPLAKRF 232 Query: 241 KDSR---CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 S + + + +D+ + + + LY G +SDH P Sbjct: 233 GHSSYTYTGFTVSPSDDMDLDHIFVKDTSGLQFKSFAVLNNLY------EDGVFISDHRP 286 Query: 298 ISIDY 302 + +D Sbjct: 287 VVVDL 291 >gi|320335581|ref|YP_004172292.1| endonuclease/exonuclease/phosphatase [Deinococcus maricopensis DSM 21211] gi|319756870|gb|ADV68627.1| Endonuclease/exonuclease/phosphatase [Deinococcus maricopensis DSM 21211] Length = 309 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 81/292 (27%), Gaps = 70/292 (23%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 VP + ++ RL+++NI R T L + + D+V LQE Sbjct: 83 VPSPSPGSRSFRLMTYNI----------------ARGTGGAAELARVISRAEPDVVCLQE 126 Query: 74 MGS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + + + + A + V+ +P+ Sbjct: 127 TNTVLPGVLRDLERRLP------------------------GYAAARSREVVVLSRFPVT 162 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 G +D RR + V + G+ + +L++H + + + Q + + Sbjct: 163 GVQDRALPDTTRRLLRATVRVRGQPVTLLNLHFTTVLWRGGWAGARDR----RAAQVRAV 218 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 Q + P V GDFN F + Sbjct: 219 LQVARQTRG---PVVACGDFNTPP------RGLVDAALREQFSNAFAQAGAGFGYTFPAR 269 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ID+ + + + R SDH P+ +D Sbjct: 270 APLVRIDHVWLRRASAVA---------------AFVPDARASDHRPLVVDVT 306 >gi|319405904|emb|CBI79536.1| exodeoxyribonuclease III [Bartonella sp. AR 15-3] Length = 260 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 44/302 (14%), Positives = 91/302 (30%), Gaps = 66/302 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V+WNI + + L ++ K D+V LQE+ + Sbjct: 1 MKIVTWNIAG----------------IKARHETLCKWLKQNQPDVVCLQEIKCIDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 +T + + +A+ K + + + R Sbjct: 41 ------NFPRNTIEDLGYHVETHGQKSFNGVAILSKKIP----DEIICRLPGDHNDKQAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + N I V ++L + ++S + Y ++ + L E Sbjct: 91 Y-IEAVYSTNKGSIRVASLYLPNGNPINSEKYFYK------TEWMKRLYTHAKSLLEYEE 143 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++AGD+N L + ++ I D+ + Sbjct: 144 PLILAGDYNVIPTSLDAKNPQEWNNDALFLPQIREIFQCITHLGFYDAIRNVTDTPSFSF 203 Query: 249 KNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + N I ID+ ++ A L I ++ SDH PI ++ Sbjct: 204 WDFQANAWKKNNGIRIDHLLLSPEAADQL-------ICAYSQTEVRGYQKPSDHIPIWVE 256 Query: 302 YD 303 + Sbjct: 257 LN 258 >gi|260426641|ref|ZP_05780620.1| exodeoxyribonuclease III [Citreicella sp. SE45] gi|260421133|gb|EEX14384.1| exodeoxyribonuclease III [Citreicella sp. SE45] Length = 260 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 86/301 (28%), Gaps = 67/301 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + + L + D+ LQE+ S V + Sbjct: 1 MKIATFNING----------------IKARHAALLDWLDEAQPDVALLQEIKS---VDEG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + ++ +A+ K +D +R Sbjct: 42 FPREPF-------EERGYNVETHGQKGFNGVAILSKLPLEDVTRGLPGDDEDEQARW--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E V + + ++L + + Y + + L+ + Sbjct: 92 --IEATVVGETHALQLCGLYLPNGNPAPGPKYDYKLA------WMERLEARARALLADEM 143 Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++AGD+N F + ++ + + + + Sbjct: 144 PAMMAGDYNVIPQAEDAAKPESWTEDALYLPQTRAAFRRILNLGFTEAFRTRHPEPGHYS 203 Query: 248 NKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + N I ID+ ++ A + D + SDH P+ + Sbjct: 204 FWDYQAGAWQRNNGIRIDHILLTPQAADLMRDVQI-------DRDIRGRDKPSDHVPVWV 256 Query: 301 D 301 D Sbjct: 257 D 257 >gi|146297840|ref|YP_001192431.1| endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae UW101] gi|146152258|gb|ABQ03112.1| Endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae UW101] Length = 1133 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 43/323 (13%), Positives = 96/323 (29%), Gaps = 40/323 (12%) Query: 10 VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 + L + + +V++N+ + + + LDAD+ Sbjct: 722 IGSLTGSSLPKSDTFDVVTYNMEFFGAPTSAYGPADKALQ----MQNAVKVINKLDADVY 777 Query: 70 FLQEMGSYNAVAKVF-----------------PKNTWCIFYSTERLINHSKRDSNN---- 108 +QE+ S A+ + +W S + Sbjct: 778 VVQEISSDAAIDDLITQMNVNGKSFNKVVSTSWSYSWETNPSDPNYPPQKLVVIYDTKTT 837 Query: 109 ---DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIH 163 + +R +S +S + R + +E +NG K + + Sbjct: 838 TLKNTRVMFKEFYDELRAGTKSLTNYPGTNSNFFSSGRLPYMVTLETNLNGVKNEIKFVD 897 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-- 221 L + + + Y+ + + LKD + ++ GD+N + Sbjct: 898 LHARANSGTDISRYN----MRKYDVEVLKDSLDTHYGDSN-IILLGDYNDDVKASVIAGQ 952 Query: 222 -DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 + + ++ E S+ A L + +D+ + + I ES + Sbjct: 953 PSSYQSFVTDTNNYKALTLEI-SQAGAYSFLSSGGFLDHITISNELFDQYINESIAVYDP 1011 Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303 D I + SDH P+ ++ Sbjct: 1012 RND-IANYTTTTSDHGPVIARFN 1033 >gi|332519237|ref|ZP_08395704.1| Endonuclease/exonuclease/phosphatase [Lacinutrix algicola 5H-3-7-4] gi|332045085|gb|EGI81278.1| Endonuclease/exonuclease/phosphatase [Lacinutrix algicola 5H-3-7-4] Length = 361 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 41/351 (11%), Positives = 92/351 (26%), Gaps = 58/351 (16%) Query: 1 MIRKYVLALVFFLVPCTASVAQK------VRLVSWNINTLSEQEGVSLWK---------- 44 M +L L+ FL P + AQ+ + +N+ L + E Sbjct: 11 MNNLRLLFLIAFLTPFISVNAQEEKTYKIHTVAFYNLENLFDTENDPEKNDEASPMMEIK 70 Query: 45 -NSVKRTTSDYTLLRQYAKNLD-------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE 96 + + + ++ ++ + E+ + + V + + + Sbjct: 71 ADRENIYKRKVHNMARVIADIGTETTGNAPALLGICEVENIKVIEDVANDP---LLLAKD 127 Query: 97 RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG--NRRAVELLVEING 154 I H + I + +K + + +S L D +R R + + E+ G Sbjct: 128 YGIVHFESPDRRGIDVGLMYQKDLFQPISKSSHTLKIYDDQTRKRVYTRDQLLVSGELEG 187 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 + ++ H S ++ + + L+++ I + + GD N Sbjct: 188 DLVHIIVNHWPSRSGGEARSRSKRIGAAKLNKRIIDSLQSIDPYAK----IITMGDLNDD 243 Query: 215 INYLGNNDDFWKTIDPNDSL------IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 D D K D ++ + + Sbjct: 244 PTNASVKDVLKAKRKKKDVKVKGIYNPYINMFKKQGLGTTAYRDAWSLFDQIMVTKPLIE 303 Query: 269 ------FLIQESFSEILYNEDDIKSRGKRL-------------SDHCPISI 300 + Y + SDH P+ I Sbjct: 304 EDFSSFRYYKAGIYNKNYLTNKRGRYKGYPLRSFADGGFTDGFSDHFPVYI 354 >gi|327403479|ref|YP_004344317.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM 16823] gi|327318987|gb|AEA43479.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM 16823] Length = 343 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 54/351 (15%), Positives = 107/351 (30%), Gaps = 67/351 (19%) Query: 2 IRKYVLALVFFLVPCTASVAQK------VR------LVSWNINTLSEQEGVSLWKN---- 45 ++KY L + V AQK ++ +VS+N+ L + + Sbjct: 1 MKKYTLFFLLISVCSVNGFAQKNPKKGALQSFHQRAIVSYNVENLFDTIDDKGVIDEEFL 60 Query: 46 -------SVKRTTSDYTLLRQYAK---NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST 95 + +R L + + I+ L E+ + + + T Sbjct: 61 PDGKLKWNSQRYQLKLDHLVEAITMNLTENPVIIGLVEIENAGVIKDLKNTGR---LAKT 117 Query: 96 ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NG 154 + I H I + K+ ++++ L + DS S R + + E+ G Sbjct: 118 KYEIAHKDSPDARGIDCGLLYDKERFKLIKMET-LTVSIDSISDFKTRDILVVKGELQGG 176 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 K I++ H S + E + + + + + ++ GDFN Sbjct: 177 KIIYLFVNHWPSRRGGEGSEIRRIQAAKVARAKVDEILK-----ADPKANIILMGDFNDH 231 Query: 215 INYLGNNDDFWKTI---DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N + D D L F + + + +D+F++ + + Sbjct: 232 PNNISIQDVLKAKDVSDSSADLLDLFADDHKAGKGTHNYKNEWGVLDHFIVSRA----IY 287 Query: 272 QESFSEILYNEDDIKSRGKRL------------------------SDHCPI 298 S L+ D I ++L SDH PI Sbjct: 288 SGSNGVALFPNDGIIVYEEKLLFTQKDGSKKPSTTYGGPNYYGGYSDHLPI 338 >gi|47568231|ref|ZP_00238934.1| exodeoxyribonuclease III [Bacillus cereus G9241] gi|228986876|ref|ZP_04147003.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|47555059|gb|EAL13407.1| exodeoxyribonuclease III [Bacillus cereus G9241] gi|228772825|gb|EEM21264.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 252 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 86/305 (28%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + +Y + +ADI LQE+ + + Sbjct: 1 MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQDGQIDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + ++ A+ K + + D R Sbjct: 47 NLEEYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + + L + Sbjct: 92 -----VITLEFEDFYIITLYTPNSKRGLERLDYRMKWEDDFRVYIKRL--------DEKK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + I + + ++ A Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTCILEEGFIDTYRYLYPNQEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV+ + + + + + SDHCP+ Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEV-----------MGSDHCPVE 247 Query: 300 IDYDF 304 + +F Sbjct: 248 LHINF 252 >gi|148656942|ref|YP_001277147.1| endonuclease/exonuclease/phosphatase [Roseiflexus sp. RS-1] gi|148569052|gb|ABQ91197.1| Endonuclease/exonuclease/phosphatase [Roseiflexus sp. RS-1] Length = 1641 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 47/332 (14%), Positives = 93/332 (28%), Gaps = 54/332 (16%) Query: 21 AQKVRLVSWNI-NTLSEQEG----------VSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 +++ ++N+ N + G + L Q LDA+++ Sbjct: 522 GGDMQVAAFNVLNYFNTFTGCTLGVGGATTGCRGAENATEFERQNAKLIQAILRLDAEVL 581 Query: 70 FLQEMGS-----YNAVAKVFPKNTW------CIFYSTERLINHSKRDSNNDIHTAIAVRK 118 L E+ + +A+A++ + F + + I A+ + Sbjct: 582 GLIEVENDGYGPNSALAELVNRLNAATAPGTYAFIDVDAATGQVNALGTDAIKVALIYKP 641 Query: 119 KNVR-----VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 V + + + DS R A +G+ + V+ HLKS + Sbjct: 642 AVVTPVGQTAVLNTVAFVNGGDSAPRNRPALAQTFRHRASGEDVTVVVNHLKSKGSPCDV 701 Query: 174 ENTYSPSCS---LLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTI 228 + S + + AQ L W+ +I GD N + + Sbjct: 702 PDAGDGSGNCNIVRRNAAQELVTWLATDPTGTGDPDILIIGDLNSYAQEDPID-----VL 756 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + +DY + A + S I +E ++ Sbjct: 757 RAAGYTDLARTFVGESAYSYVFNGQWGYLDYALASPPALAKVSGVSEYHINADEPNVLDY 816 Query: 289 G-----------------KRLSDHCPISIDYD 303 R SDH PI + + Sbjct: 817 NLNFKSVGQQTSLFAPDQYRTSDHDPILVGLN 848 >gi|297539130|ref|YP_003674899.1| Endonuclease/exonuclease/phosphatase [Methylotenera sp. 301] gi|297258477|gb|ADI30322.1| Endonuclease/exonuclease/phosphatase [Methylotenera sp. 301] Length = 250 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 81/288 (28%), Gaps = 48/288 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS----- 76 +R+ ++NI+ R + + L AD++FLQE+ Sbjct: 3 NTLRIATFNIHKGFTHFNA--------RFSLHLQR--DMLRKLQADVIFLQEVQDVHTKH 52 Query: 77 -YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + ++ K H AV K + + + Sbjct: 53 TERFASMSTSGQMEFLADEVWSDYSYGKNSVYPAGHHGNAVLSKFPIIKTNNQDISA--- 109 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R + + I + + + F QQ + ++I Sbjct: 110 --HATEQRGMLHCEINIPTWDEPLHAVCVHLGLF-----------AQWRRQQLVSVSEYI 156 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 Q + P +IAGDFN G F + ++ ++ F + + Sbjct: 157 EQHIPANAPLIIAGDFNDWGMRTG--RIFAERLNMHE---VFEHHAGKPAKSFPAWLPML 211 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D + K + S + ++SDH ++ Sbjct: 212 RLDRIYVRGFNVKHVEVHSGAHF-----------LKVSDHAILTATLT 248 >gi|126668281|ref|ZP_01739241.1| exonuclease III [Marinobacter sp. ELB17] gi|126627307|gb|EAZ97944.1| exonuclease III [Marinobacter sp. ELB17] Length = 270 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 32/285 (11%), Positives = 64/285 (22%), Gaps = 59/285 (20%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 + L + L+ D + LQE + + + + Sbjct: 12 RTRLHQLAAVIEQLEPDFIGLQETKVSDE----------DFPLADIEALGYHVHFHGQKT 61 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 H +A+ K + RR + +NG+ + V++ F Sbjct: 62 HYGVALMSKM-----APDKVYKGFPDDLDNAQRRLITADFTVNGETLTVIN-----GYFP 111 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL------------ 218 + + L ++ + K V+ GD N Sbjct: 112 QGESRDHPVKFPAKQKFYADLMSYLDELKLRNTKVVVMGDVNISPTDKDIGIGADNAKRW 171 Query: 219 ---------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----------PID 258 + ++ F + + ID Sbjct: 172 LRSGKCSFLPEERQWLGEVESRGYTDVFRHLHPHEADTFSWFDYRSKGFDREPKRGLRID 231 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + N S + D R SDH P+ + Sbjct: 232 LIMASDNLLSQAKSAGVSYDVRAMD-------RPSDHAPVWARFT 269 >gi|307726281|ref|YP_003909494.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1003] gi|307586806|gb|ADN60203.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1003] Length = 269 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 75/306 (24%), Gaps = 74/306 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAV 80 +R+ ++NIN S L Q+ + DIV LQE+ Sbjct: 3 TLRIATFNING----------------IRSRQAALVQWLEREAPDIVCLQELKAADSAFP 46 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 A + + +A+ K L+ L G + Sbjct: 47 ADALRDADYHAIWH------------GQSAWNGVAILSKGEAPLESRRGLPGFEADTHSR 94 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 AV + V ++L + + Y + L + + Sbjct: 95 YLEAAV--------GGLLVCCLYLPNGNPQPGPKFEYK------LKWFDHLIEHAANLLK 140 Query: 201 SLVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRC 245 S P V+AGDFN + ++ + K Sbjct: 141 SGHPVVLAGDFNVVPTDEDIYNPRSWLKDALLQPESRERYQRLLAQGWTDSLRKHFGDER 200 Query: 246 NANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ ++ L D SDH P Sbjct: 201 VYTFWDYFRRHWDTNSGLRIDHILLSPELAPRLRDAGV-------DRWVRGEAHASDHAP 253 Query: 298 ISIDYD 303 ++ D Sbjct: 254 TWVELD 259 >gi|297197811|ref|ZP_06915208.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC 29083] gi|197716600|gb|EDY60634.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC 29083] Length = 305 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 85/301 (28%), Gaps = 39/301 (12%) Query: 12 FLVPCTASVAQKVR----LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 + AS A+ R ++++N+ S E ++RQ + Sbjct: 33 LMGTLPASAAKPYRRRLDVMTFNLRFASTSE--------PNSWAVRRPVMRQLLRQEAPT 84 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 ++ QE + + T R + T ++ + Sbjct: 85 VLGTQEGLYQQLLDIHSDLGAHYDWIGTGREGGSHDESTAVFYDTRRLAPVEHDTLWLSD 144 Query: 128 YPLLGAKDSFSRAGNRRAVELLVE---INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 P + +++ A R + G++ +VL+ H F + S L Sbjct: 145 TPRVVGSNTWGAALPRIVTWVRFRDRAAGGREFYVLNTH-----FDHVSQYARERSAQFL 199 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT-IDPNDSLIRFPKEKDS 243 S++ + P ++ GDFN + + D T + + Sbjct: 200 SRRIAEF--------DRTSPVLVTGDFNAEAHDNRAYDTLLATGLVDTWDAAAERSRLYA 251 Query: 244 RCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + L ID+ + + + G+ SDH P+ Sbjct: 252 TFHGYRPLTPDGDRIDWILATPGT---------TVQRAVINTFAMDGQFPSDHLPVQATL 302 Query: 303 D 303 Sbjct: 303 T 303 >gi|237794818|ref|YP_002862370.1| exodeoxyribonuclease III [Clostridium botulinum Ba4 str. 657] gi|229261060|gb|ACQ52093.1| exodeoxyribonuclease III [Clostridium botulinum Ba4 str. 657] Length = 253 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 83/304 (27%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ SWN+N L + ++ DI+ +QE + Sbjct: 1 MRIYSWNVNGLRAVAKKNF---------------IEWIGEESPDILCIQETKLQENQLEH 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + +++ ++S + ++ +A K + + + DS R Sbjct: 46 NIKNIDSYYSYFS----------FAAKKGYSGVATYTKVKPISVKHSIGIEKFDSEGRI- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + K +L+I+ + + + L ++ + + Sbjct: 95 --------LITEFKDFTLLNIYFPNGQRDEER-------LQYKLDFYEALFNYCDELVKE 139 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKT-------IDPNDSLIRFPKEKDSRCNA------- 247 VI GD+N N + + I+ + + Sbjct: 140 GKKLVICGDYNTAHNEIDLKNPKANEKTSGFLRIERDWLDKIIERGYTDTFRNMNPDKIK 199 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY + N + +Y SDHCPI Sbjct: 200 YSWWSYRFKARERNAGWRIDYHFVSNNLLDRVENTEILNEVY-----------GSDHCPI 248 Query: 299 SIDY 302 ++ Sbjct: 249 MLEL 252 >gi|256763359|ref|ZP_05503939.1| exonuclease III [Enterococcus faecalis T3] gi|256684610|gb|EEU24305.1| exonuclease III [Enterococcus faecalis T3] Length = 257 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 36/306 (11%), Positives = 78/306 (25%), Gaps = 78/306 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ +SWN+N L + LDAD LQE A Sbjct: 6 TMKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQI 49 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + +++ +S A++VR Sbjct: 50 DLELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------ESHDQEG 95 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R ++ + + +++ + + + + ++ + + Sbjct: 96 R-----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK 143 Query: 203 VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N + + + + F Sbjct: 144 -PVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGI 202 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYFV+ ++ + L+ + SDHCP+ Sbjct: 203 YSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPV 251 Query: 299 SIDYDF 304 + DF Sbjct: 252 EVVLDF 257 >gi|223984111|ref|ZP_03634263.1| hypothetical protein HOLDEFILI_01555 [Holdemania filiformis DSM 12042] gi|223963905|gb|EEF68265.1| hypothetical protein HOLDEFILI_01555 [Holdemania filiformis DSM 12042] Length = 276 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 35/289 (12%), Positives = 83/289 (28%), Gaps = 41/289 (14%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+ + R + +R + DI+ +QE+ Sbjct: 11 LKVMTFNLKN------DMFFTRKNLRWDTRRQYVRNLIASTSPDIIGVQELSDSMREQLQ 64 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY------PLLGAKDSF 137 + ++R H+ I K +L++ P ++ Sbjct: 65 ALLPQYQFVGQA-----RNRRRQFMHEHSDILFLKDRFELLEEKTFWLSKQPEEAGSRTW 119 Query: 138 SRAGNRRAVELLVEINGKK--IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + R ++ + V + HL L T + + ++ Q L+ Sbjct: 120 TSIFPRICTMAQLKDRETEQVFRVFNTHL-----DHLLAYTRTVEIRTIIREMQRLQQ-- 172 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFW--KTIDPNDSLIRFPKEKDSRCNANKNLRN 253 E P ++ GD N ++ ++ + + Sbjct: 173 ----EKACPLILMGDLNTTMSSPSLQLLIKPENRLNLKPVYDSSAAFNTLHYGKGRLKED 228 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++PIDY + ++ + G SDH P+ Sbjct: 229 RLPIDYIYVSED---------YDVRSTRIITTCFNGLYPSDHYPVICHL 268 >gi|293608668|ref|ZP_06690971.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292829241|gb|EFF87603.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 812 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 92/323 (28%), Gaps = 46/323 (14%) Query: 21 AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSY 77 A +R+ S+N+ N + G + + + D + K +DAD+ L E+ + Sbjct: 461 ANHIRVASFNVLNYDNGATGFPTERGATTQAEFDKQHRKIVSALKAIDADVYGLMEIANN 520 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + S + + R + I AI K V+ L + L D Sbjct: 521 GYGPNSAIAHLTSALGSDWKYVVPENLDRLGGDAIAVAIIYNSKRVKPLNKPVVL----D 576 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF---LDSLENTYSPSCS-----LLSQQ 187 + A K V+ HLKS S + + Sbjct: 577 LGDKNRTTLAQSFQAVRGNKTFTVIPNHLKSKSCSGVDASSIDADQKDGQGCWNPTRVKA 636 Query: 188 AQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + W+ + ++ GD N ++ + L + + Sbjct: 637 VDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEEPI--LSFEKANYKVLLNDAKVGQGAEA 694 Query: 246 NANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------- 289 + +D+ + D Y +++ I +E + Sbjct: 695 YSYVFGVASDANGNGGAGNLDHAIADAALYPKVVRTFAWHINADEPTVLDYNEEYKTDEQ 754 Query: 290 ---------KRLSDHCPISIDYD 303 R SDH P+ +D D Sbjct: 755 KALFYAEDAYRSSDHDPVIVDLD 777 >gi|158425166|ref|YP_001526458.1| endonuclease [Azorhizobium caulinodans ORS 571] gi|158332055|dbj|BAF89540.1| endonuclease [Azorhizobium caulinodans ORS 571] Length = 370 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 35/264 (13%), Positives = 71/264 (26%), Gaps = 17/264 (6%) Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 T + ++ AD++ L E+ S ++ + + + + Sbjct: 111 TEEAMRNTARVIGDVKADVMALVEVESRPVLSAFNTQILPAVNAIPFDHVMVIDGNDERG 170 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 I IA R +S+ + A + +G+ + +L H KS F Sbjct: 171 IDVGIATRADYPIGDMRSHVDDRLPNGQPIFSRDCAEYEIHTPSGQNLLLLLNHFKSKGF 230 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV-PFVIAGDFNRKINYLGNNDDFWKTI 228 + + S + QA + + Q+ + GDFN Sbjct: 231 G-----SKATSDARRKAQAARVAEIYKQRIADGYSHIAVLGDFNDTPGSAAL-APLLSGT 284 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY-------- 280 D D + IDY ++ + + Sbjct: 285 DLKDVFGHASFDNGGYPGTYGLCNADNKIDYILLSPELFGKVTAGGVFRKGAWPGSRPKR 344 Query: 281 --NEDDIKSRGKRLSDHCPISIDY 302 ++ SDH + +D Sbjct: 345 WDVYPEVARPADAASDHSAVWVDL 368 >gi|94267118|ref|ZP_01290753.1| Endonuclease/exonuclease/phosphatase [delta proteobacterium MLMS-1] gi|94269243|ref|ZP_01291411.1| Endonuclease/exonuclease/phosphatase [delta proteobacterium MLMS-1] gi|94272682|ref|ZP_01292167.1| Endonuclease/exonuclease/phosphatase [delta proteobacterium MLMS-1] gi|93450049|gb|EAT01420.1| Endonuclease/exonuclease/phosphatase [delta proteobacterium MLMS-1] gi|93451292|gb|EAT02176.1| Endonuclease/exonuclease/phosphatase [delta proteobacterium MLMS-1] gi|93452167|gb|EAT02834.1| Endonuclease/exonuclease/phosphatase [delta proteobacterium MLMS-1] Length = 248 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 34/283 (12%), Positives = 72/283 (25%), Gaps = 42/283 (14%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R++S+NI+ + + + + + D+V LQE+ ++ Sbjct: 3 LRIMSYNIHRAIGVDRLFRP-----------ERIARIINHHQPDLVLLQEVDVGVPRSRK 51 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + H A + Q++ L R Sbjct: 52 LDLAEELARLCDYPHRALGLNVALRQGHYGNATLSRFPIQRQRNIDLT-----LPDHKAR 106 Query: 144 RAVELLVEIN---GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + + I+ + + +L + S + L + Sbjct: 107 GCLYTNIVIDPDQSGPVALPVFNLHLGLSFHERP--QQVGMVIRSPEFAEL--------D 156 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 P ++AGDFN L + I + + +D Sbjct: 157 PAAPCIVAGDFNDWFTRLAP---MFTEIMGFRCATSHSHGFQNSFLTYPSFSPTGGLDKI 213 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + EI+ K SDH P+ + + Sbjct: 214 FLRGPL----------EIIKRRRCRMGISKLASDHLPVLAELE 246 >gi|282892485|ref|ZP_06300819.1| hypothetical protein pah_c260o038 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281497767|gb|EFB40131.1| hypothetical protein pah_c260o038 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 346 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 39/300 (13%), Positives = 90/300 (30%), Gaps = 36/300 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +K+R+VS+N+ + + V R + + + + + ++ D++ QE+ Sbjct: 61 EKIRVVSYNMLF----NYMDNRLDEVHRWPNRCSRVVELIQAINPDLIGSQELQQDQVED 116 Query: 82 KV-FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + F + + + + + + S P KD +S A Sbjct: 117 LLSFLGDEYAFYGKGTLDGKMKGEVNGIFYRKSRFNVDNESVLFMSSTPHTPGKDPYSFA 176 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +EL + GK+ + + H+ +++ I++ + Sbjct: 177 RTLTILELEDFVTGKRFAIANAHVAFGSIDS------------RDYSVRFMASHISKMAK 224 Query: 201 SLVPFVIAGDFNRKINYLGNN-------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 +P +I D N + D + + L N Sbjct: 225 R-LPVIITADLNTFPHRQDIKKFPAYDGDYLHRLLTSAGLLNAQNTSLLGFLGPLSTYTN 283 Query: 254 ------KIPIDYFVMDQN-----AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 K D + + + +L+ + K + SDH P+ +D Sbjct: 284 DDGETKKGGFDNRFLSTGTPGVFLDHVYVGGGITVLLHAIEPAKVDQQFPSDHLPVIVDL 343 >gi|251794788|ref|YP_003009519.1| exodeoxyribonuclease III Xth [Paenibacillus sp. JDR-2] gi|247542414|gb|ACS99432.1| exodeoxyribonuclease III Xth [Paenibacillus sp. JDR-2] Length = 258 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 79/304 (25%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VSWN+N L Y +DAD LQE K+ Sbjct: 1 MKFVSWNVNGLRASVNKGF---------------LDYFNEMDADFFCLQETKLQEGQIKL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +F+ + ++ A+ K+ + +D+ R Sbjct: 46 ELGEAYHLFW----------HYAEKKGYSGTAIFTKHKPLSISYGLGEEDEDTEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + S + + L + Sbjct: 92 -----VITLEYENFYLVTVYTPNARRDLSRLDFRLAWEEMFRGYLIKL--------DEHK 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + F R +A Sbjct: 139 PVIVCGDLNVAHQDIDLKNAKSNRGNSGFTDEEREKMTRLLDAGFIDSFRYLYPDRTDAY 198 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ +++ SDHCP+ Sbjct: 199 TWWSFMPKIRERNVGWRIDYFLASARLAPAIVEAGI-----------DSQILGSDHCPVV 247 Query: 300 IDYD 303 + D Sbjct: 248 LTLD 251 >gi|328886193|emb|CCA59432.1| Exodeoxyribonuclease III [Streptomyces venezuelae ATCC 10712] Length = 271 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 79/304 (25%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N T+ L + ++ D++ +QE Sbjct: 11 MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCVQETKCTAE---- 50 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + + +A+ + + L G + R Sbjct: 51 ------QFPTEELRALGYESVVNATGRWNGVALVSRVGLADVVTG-LPGGPEYDGMDEPR 103 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + + Y + + LK + + Sbjct: 104 A-----ISATCGPVRVWSVYVPNGREVAHEHYAYK------LRWLEALKAAVAEDAAGDR 152 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF + GD+N + P+ + Sbjct: 153 PFAVLGDYNIAPTDDDVWDRAAFEGLTHVTEPERAALAGLREAGLSDVVPRPLKYD-HPF 211 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID ++ + + D + +GK SDH P+ Sbjct: 212 TYWDYRQLCFPKNRGMRIDLVYGNKPFAEAVTDSYV-------DREERKGKGASDHAPVV 264 Query: 300 IDYD 303 +D D Sbjct: 265 VDLD 268 >gi|171913163|ref|ZP_02928633.1| hypothetical protein VspiD_18325 [Verrucomicrobium spinosum DSM 4136] Length = 261 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 65/214 (30%), Gaps = 18/214 (8%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M R L L+ + ++ VRLV+WN+ + + + Sbjct: 1 MWRLIFLGLL-VAISTPGYASEVVRLVTWNLKWFP----GERPNATQDEKDRHFLEVAAV 55 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 AD++ LQE+ ++ K+ + R + IA+ + Sbjct: 56 MPQFRADVLVLQEVRDQDSAEKLAKLMPGFQVHVVSRFKDEVGGAVGLQQ---IAIMSRF 112 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + R + + G+ + V +HLKS + Sbjct: 113 ----AADGAWAESWKRGWANAPRGYAYAKLIVEGRPLHVYGLHLKSNLGDPIKNTSKRED 168 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 + L I + ++ P V+ GDFN Sbjct: 169 A------VEQLLGHIKDQCKAGEPIVVVGDFNTS 196 >gi|163796419|ref|ZP_02190379.1| Exonuclease III [alpha proteobacterium BAL199] gi|159178269|gb|EDP62813.1| Exonuclease III [alpha proteobacterium BAL199] Length = 264 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 79/306 (25%), Gaps = 70/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+V+WNIN + + D++ LQE A+A Sbjct: 1 MRVVTWNIN----------------SVRLRLPRALELIAAVQPDVLCLQE---TKAMADQ 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + S + +AV + D Sbjct: 42 FPAAAFAEAGYPHQ------AVSGMKGYNGVAVVSRLPIEETDRCDFCAKAD-------- 87 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + V + G + + ++ + D + +P + + W T ++ Sbjct: 88 -ARHVAVRVAGGP-ELHNFYVPAG--GDVPDPAVNPKFAHKLDFLAESRAWFTAERTREQ 143 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N + + + + + Sbjct: 144 PMILVGDLNIAPLQTDVWSHKQLLGVVSHTPVEVEALGALQADLGWVDAVRQRIPPEQSL 203 Query: 248 NKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + S ++ SDH P Sbjct: 204 YTWWSYRARDWDESNRGRRLDHVWVTPPLAGTVRAASV-------LREARGWEKASDHVP 256 Query: 298 ISIDYD 303 + +D D Sbjct: 257 VIVDLD 262 >gi|157960646|ref|YP_001500680.1| endonuclease/exonuclease/phosphatase [Shewanella pealeana ATCC 700345] gi|157845646|gb|ABV86145.1| Endonuclease/exonuclease/phosphatase [Shewanella pealeana ATCC 700345] Length = 379 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 42/376 (11%), Positives = 101/376 (26%), Gaps = 88/376 (23%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVF 70 + T++ +V+L S+N+ E S ++ + L ++ DI+ Sbjct: 1 MANTSTKTNRVKLASFNLFNYIEPPLAYYDFENIYSAEQWQKKQSWLAEFLAQHQPDIIG 60 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV---LQQS 127 QE+ S +A+ + + ++T D + + V ++ Sbjct: 61 FQEVFSASALDEQMHAAGYE-HFATVGEPTVIDDYICRDPVVGLGSKFPFTEVTAIEAEA 119 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 + + + A +R+ + V++ + + + E + Q Sbjct: 120 EYIHALGLNPNFAFSRKPLRATVQLPLIGLCDIYVVHFKSKRPHLDELPAAKFVQSKVTQ 179 Query: 188 AQ----------------------------------WLKDWITQKKESLVPFVIAGDFNR 213 A + ++ E+ P ++ GDFN Sbjct: 180 ATNASSAALVNFGELLGRNSLGQWASSIQRGSEAALLFHAMLQRRIETNQPMILMGDFNE 239 Query: 214 KINYL--------------------------GNNDDFWKTIDP---------------ND 232 ++ F + + + Sbjct: 240 ELTSSVLSPLTNRELRFEKEGLGQLANFPLTDAYKLFQQGLQDLFGVKATDSSLDEIAAE 299 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI------K 286 K + SR + + +DY ++ + Y+ +D Sbjct: 300 EERMLAKARASRAPTHYYGASGNVLDYILLSADFDPSFDNSVAEVCDYHTEDRHLVNPSF 359 Query: 287 SRGKRLSDHCPISIDY 302 R + SDH P++ Sbjct: 360 ERDSQSSDHAPVTCTL 375 >gi|146297973|ref|YP_001192564.1| endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae UW101] gi|146152391|gb|ABQ03245.1| Endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae UW101] Length = 305 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 38/296 (12%), Positives = 76/296 (25%), Gaps = 63/296 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++S+N+ + + + ++ + D DI+ +QE + + Sbjct: 54 DFSVMSYNVRLFNVFKWLDRDDIP--------ENIKGFIDEKDPDILCIQEYSNSAHLDL 105 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + I T A+ K + + + ++ Sbjct: 106 KVYPHRYIFI-------------DGKQIKTGQAIFSKFPIIDEGKIVFPKSDNN------ 146 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDS---------------LENTYSPSCSLLSQQ 187 V ++ I V ++HL+S + Y+ +QQ Sbjct: 147 --VVYADIKRGKDIIRVYNMHLQSIKISPDVSEISDDIDNVNQKKSQRIYARISKGFTQQ 204 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + + + K+ P +I GD N + K F + + Sbjct: 205 QEQAEIFKEHIKKCKYPIIICGDMNNSPFSYVYRNIKGKL------KDAFEEAGEGFGAT 258 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K IDY D SDH PI Sbjct: 259 YKFKYYPARIDYIFTDTKMKVK-------------QFESFPDFENSDHYPIMTRLS 301 >gi|329930518|ref|ZP_08284058.1| exodeoxyribonuclease III [Paenibacillus sp. HGF5] gi|328934896|gb|EGG31386.1| exodeoxyribonuclease III [Paenibacillus sp. HGF5] Length = 250 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 75/304 (24%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N L Y DADI +QE ++ Sbjct: 1 MKLVSWNVNGLRACVTKGFM---------------DYFNEADADIFCVQETKLQAGQIEL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S I + + S R Sbjct: 46 DLGPEYQQYWNYAEKKGYSGTAVFTRIA---------------PLSVRYGLEEDSEPEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++++++ + S + L + Sbjct: 91 -----VITLEFEDFYLVNVYTPNAKRDLSRLDYRLEWEERFRTYLLQL--------DERK 137 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + F R + Sbjct: 138 PVIVCGDLNVAHQEIDLKNAKSNHGNSGFTLEERGKMTDLLAAGFIDSFRHFYPDRTDVY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ + L + SDHCP+S Sbjct: 198 SWWSYMAKVRERNIGWRIDYFLTSARLAEKLKDAEIDCHVL-----------GSDHCPVS 246 Query: 300 IDYD 303 + + Sbjct: 247 LTLE 250 >gi|320529778|ref|ZP_08030856.1| exodeoxyribonuclease III [Selenomonas artemidis F0399] gi|320138017|gb|EFW29921.1| exodeoxyribonuclease III [Selenomonas artemidis F0399] Length = 250 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 79/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R VSWN+N L ++ K LDAD LQE + Sbjct: 1 MRFVSWNVNGLRAALKKGFMES---------------FKELDADAFCLQETKMQEG-QAI 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + + + A+ + + + D+ R Sbjct: 45 LDLPGYEQYFYSAEKKGY----------SGTAIFTRVKPLSVARGIGIPQHDNEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++++ ++ + + + L+ S Sbjct: 91 -----VITMEFDDLYLVTVYTPNSQNALARLDYRMAWEDAFRSFLLELR--------SKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + + F + A Sbjct: 138 PVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGKFGELLAAGFVDTFRALYPDKVGAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ + + ++ SDHCP+S Sbjct: 198 TWWSYLRHARETNAGWRIDYFLVSEELRGRIAAAEIHADVF-----------GSDHCPVS 246 Query: 300 IDYD 303 + Sbjct: 247 LTLS 250 >gi|229917919|ref|YP_002886565.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b] gi|229469348|gb|ACQ71120.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b] Length = 247 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 85/285 (29%), Gaps = 45/285 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NI + Q K ++AD++ LQE+ SY Sbjct: 1 MRIATYNIWN------------HDTLWQKRIDAICQEVKRINADVIALQEVRSYE----- 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A K ++ ++S Sbjct: 44 -KGSVAHDIAEATGYPYCVFHAYPDSPDEGLAFLSKVPFSSVEAIWEEDVEESNFC---- 98 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + + G++ + ++HL S S+ Q + ++DW+++ + + Sbjct: 99 -ATRVTLIFGGQEWGLTNVHLNW------------RSSSIRECQMEVVRDWLSKGHQKAI 145 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-----KIPID 258 + GDFN +D + + N L++ D Sbjct: 146 EV-LCGDFNDHPQSTIYDDVSDAGWLDVTTFVGEEARPTLDVKHNPYLQSSHLEQPERYD 204 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + + D SR SDH + +D+ Sbjct: 205 WILFRSEWSEL----EVQHVDVFGDMRTSRDVVPSDHYGVVVDFT 245 >gi|253574957|ref|ZP_04852296.1| exodeoxyribonuclease III [Paenibacillus sp. oral taxon 786 str. D14] gi|251845413|gb|EES73422.1| exodeoxyribonuclease III [Paenibacillus sp. oral taxon 786 str. D14] Length = 251 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 80/305 (26%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N L G Y K DADI LQE ++ Sbjct: 1 MKLVSWNVNGLRACVGKGF---------------LDYFKEADADIFCLQETKLQEGQIEL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ +S I + + + R Sbjct: 46 DLGSEYEQYWNYAEKKGYSGTAVFTRI---------------KPLSVRYGMEEDYEPEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++ +++ ++ + S + L +++ Sbjct: 91 I-----ITLEFEQFYLVTVYTPNAKRDLSRLDYRMEWEDRFRTYLTGL--------DAVK 137 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N Y + + + F R Sbjct: 138 PVIVCGDLNVAHNPIDIKNAKSNEGNSGYTLEERGKMTELLASGFIDTFRHFYPDREGVY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L + SDHCP+S Sbjct: 198 SWWSYMPKIRERNIGWRIDYFLASSRLAPKLQDAGIDCHIL-----------GSDHCPVS 246 Query: 300 IDYDF 304 + ++ Sbjct: 247 LTVEW 251 >gi|300113189|ref|YP_003759764.1| endonuclease/exonuclease/phosphatase [Nitrosococcus watsonii C-113] gi|299539126|gb|ADJ27443.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus watsonii C-113] Length = 289 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 86/303 (28%), Gaps = 59/303 (19%) Query: 11 FFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQY 60 L + S AQ+ +RL+S+NI + R + Q Sbjct: 4 LALCSPSTSSAQEQHSLRLLSYNIQAGVTTTRYHHYLTRSWKHILPDGRRHQTLASIAQV 63 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKK 119 D DIV LQE S + + ++ +I + A+ + Sbjct: 64 IS--DFDIVGLQEADSGSLRTGFVNQAKLLAELCDFTYLHQQATRRFANIAQQSNALLSR 121 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 ++Y L G R A+ + VL IHL Sbjct: 122 IQPSYLRTYRLPGL------VPGRGAILAHFGNPKNPLIVLMIHLALG------------ 163 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 +QQ D+I+ + V+ GD N +I+ KT Sbjct: 164 -RRSRTQQL----DFISNLVHNHPYVVVMGDLNCQIHSPELRALLRKTGLKAPVTKIPT- 217 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + R K ID+ ++ + + +SDH P++ Sbjct: 218 --------YPSWRPKRHIDHILVSPSLEVIQVCALAH--------------AVSDHLPLA 255 Query: 300 IDY 302 + Sbjct: 256 TEI 258 >gi|228469355|ref|ZP_04054373.1| endonuclease/Exonuclease/phosphatase family protein [Porphyromonas uenonis 60-3] gi|228309152|gb|EEK17772.1| endonuclease/Exonuclease/phosphatase family protein [Porphyromonas uenonis 60-3] Length = 350 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 39/332 (11%), Positives = 87/332 (26%), Gaps = 59/332 (17%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNS-----------VKRTTSDYTLLRQYAKNLD--- 65 Q+ VS+N+ L + + W + R L + ++ Sbjct: 27 AQQRFTFVSYNVENLFDTIPSTRWDDREYLPTARKGWTAPRMKRKCRQLAEVISHVTAWD 86 Query: 66 -ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 ++ LQE+ S A+ ++ + S + H A+ + Sbjct: 87 IPALIALQEVESVEALEQL---GQHTLLSSANYKTICATGSDRRGSHVALLYDADRFALE 143 Query: 125 Q-QSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCS 182 + + +PL DS R + + + ++ ++ HL S + E + Sbjct: 144 RIEEWPLRITPDSVY--PTRNLLFVSGRLPSAARLSLIVCHLPSRRGGATAEKARATLIK 201 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD------FWKTIDPNDSLIR 236 +L + L + ++ GDFN + + +D + + Sbjct: 202 MLRMRTDSLL-----MADPAQSIIVLGDFNATPEDALTDSWALSYQAYQSQVDSLEMVDL 256 Query: 237 FPKEKDS-----RCNANKNLRNKIPIDYFVMDQNAYKFLIQESF---------------- 275 P + + ID + ++ Sbjct: 257 TPPFTSEQLETMPPGSYYYRGSWERIDRLFVSRSLLAESHYPHIELETVRIALPPQQYMH 316 Query: 276 -----SEILYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P+ Sbjct: 317 ETPAPWGRPRRTYGGDTYLGGPSDHLPLVGTL 348 >gi|184157496|ref|YP_001845835.1| extracellular nuclease [Acinetobacter baumannii ACICU] gi|332872463|ref|ZP_08440434.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter baumannii 6014059] gi|183209090|gb|ACC56488.1| predicted extracellular nuclease [Acinetobacter baumannii ACICU] gi|322507811|gb|ADX03265.1| Putative extracellular nuclease [Acinetobacter baumannii 1656-2] gi|323517411|gb|ADX91792.1| extracellular nuclease [Acinetobacter baumannii TCDC-AB0715] gi|332739349|gb|EGJ70205.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter baumannii 6014059] Length = 812 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 98/325 (30%), Gaps = 50/325 (15%) Query: 21 AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSY 77 A +R+ S+N+ N + G + + + D + K++DAD+ L E+ + Sbjct: 461 ANHIRVASFNVLNYDNGATGFPTERGANTQAEFDKQHRKIVSALKSIDADVYGLMEIANN 520 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + R N+ I AI K V+ L ++ L Sbjct: 521 GYGPNSAIAHLTSALGPDWKYVIPENLDRLGNDVIAVAIIYNSKRVKSLNKAVVLDLGD- 579 Query: 136 SFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPS--------CSLLS 185 NR + + K V+ HLKS N+ + Sbjct: 580 -----KNRTTLAQTFQAVRGNKTFTVIPNHLKSKGCSGVDANSSNADQNDGQGCWNPTRV 634 Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + + W+ + ++ GD N ++ + L + + Sbjct: 635 KAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAPI--LAFEKANYKVLLNDAKVGQGA 692 Query: 244 RCNANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289 + + +D+ + D + Y +++ I +E + Sbjct: 693 QAYSYVFGVASDANGNGGAGNLDHAIADADLYPKVVRTFAWHINADEPTVLDYNEEYKTD 752 Query: 290 -----------KRLSDHCPISIDYD 303 R SDH P+ +D D Sbjct: 753 EQKALFYSEDAYRSSDHDPVIVDLD 777 >gi|255727859|ref|XP_002548855.1| hypothetical protein CTRG_03152 [Candida tropicalis MYA-3404] gi|240133171|gb|EER32727.1| hypothetical protein CTRG_03152 [Candida tropicalis MYA-3404] Length = 815 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 42/332 (12%), Positives = 79/332 (23%), Gaps = 43/332 (12%) Query: 13 LVPCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 V T S ++S+N + + + L DI+ Sbjct: 460 SVATTTSSGDSFTVLSYNTLCQHYATPKMYKFTPSWALDWEYRKNSLENEILGYSTDIIC 519 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----IHTAIAVRKKNVRVLQ 125 LQE+ + P T + SK +++ A R + + Sbjct: 520 LQEVETRTFNEFWLPLMTSKGYRGHFYSKTRSKTMQDSESKKKVDGCATFYRGEKFSLSN 579 Query: 126 QSYPLLGAKDSFS-------RAGNRR--------AVELLVEINGKKIWVLDIHLKSFCFL 170 + + + A NR + L + G+ I V++ HL Sbjct: 580 KQNFEYASAWLGNDRYKKTEDAFNRYVNKDNIALILFLQHKETGQDIAVVNTHLHWDPAF 639 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN------DDF 224 + ++ L Q + + ++ GD N + Sbjct: 640 NDVKT-LQVGILLEELQVTLKRQGQSGDDIKNASIIVCGDLNSVKDSAVYQLFSTGVSKD 698 Query: 225 WKTIDPNDSLIRFPKEKDSRC-------------NANKNLRNKIPIDYFVMD-QNAYKFL 270 + + D + N IDY Sbjct: 699 HEDLSDRDFGKFTEEGFHHPFKLKSAYETVGELPFTNMTPGFTDNIDYIWYSTPTLQVKG 758 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + E + SDH PI + Sbjct: 759 LLGKVDEEYTSHCIGFPDANFPSDHVPILARF 790 >gi|254561142|ref|YP_003068237.1| exodeoxyribonuclease III [Methylobacterium extorquens DM4] gi|254268420|emb|CAX24377.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP endonuclease VI) [Methylobacterium extorquens DM4] Length = 264 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 79/303 (26%), Gaps = 64/303 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N L + D+V LQE+ +A Sbjct: 1 MRITTWNVN----------------SIKQRVGHLLGFLDEAKPDVVCLQELKCQDA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + +A+ + LQ + L G R Sbjct: 41 ------SFPREEIEAAGYAVETLGQKAYNGVALLVRAP--LQYTQLLRGLPGDAEDEQAR 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 L+ + V I+L + + +Y + L+ + Sbjct: 93 YIEALVHGEGVAPVRVASIYLPNGNPAPGPKYSYKLAFMAR------LRTHARALMTTEE 146 Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----------NANK 249 V+AGDFN + + ++ F Sbjct: 147 ALVLAGDFNVIPEPEDAADPTAWTQDALFLPETRRAFRALVAEGFTDGLRACEPSAGLYT 206 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A L+ S ++ SDH P+++ Sbjct: 207 FWDYQAGCWPRNQGIRIDHLLLSPQAADRLVSASVQRH-------LRGLEKPSDHVPVTV 259 Query: 301 DYD 303 + Sbjct: 260 ELS 262 >gi|304320394|ref|YP_003854037.1| exodeoxyribonuclease III [Parvularcula bermudensis HTCC2503] gi|303299296|gb|ADM08895.1| exodeoxyribonuclease III [Parvularcula bermudensis HTCC2503] Length = 264 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 80/307 (26%), Gaps = 71/307 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ +WNIN L+ ++ + + DI+ LQE + A Sbjct: 1 MRITTWNIN----------------SVRLRLGLVERFLETVKPDILCLQETKCQNDQFPA 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K F + + + +A + G D+ Sbjct: 45 KAFANAGY-----------PHQAIHGQRGYHGVATLSRLPLHEITRRQYCGKDDARH--- 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + +E I + + ++ + + E L +++ T Sbjct: 91 ----IAVTLEEG---IVIHNFYVPAGGDIPDPEQNEKFDHKLRF--VDEMREVFTGL--G 139 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 P ++ GD N + + ++ + + Sbjct: 140 DQPHILVGDLNIAPHENDVWSHKQLLKVVSHTPPETERLAALMEAAPFIDVMRELTADEQ 199 Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ + + + + D R SDH Sbjct: 200 KLYTWWSYRSKDWRKSNRGRRLDHIWVSPALKDRALAKGRR--AFTVHDDVRGWDRPSDH 257 Query: 296 CPISIDY 302 P+++D Sbjct: 258 APVTLDL 264 >gi|91974922|ref|YP_567581.1| exodeoxyribonuclease III [Rhodopseudomonas palustris BisB5] gi|91681378|gb|ABE37680.1| exodeoxyribonuclease III [Rhodopseudomonas palustris BisB5] Length = 352 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 31/314 (9%), Positives = 70/314 (22%), Gaps = 65/314 (20%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + + L +WNIN L+ + K D++ LQE Sbjct: 77 NSPRLPMRFTLTTWNIN----------------SVRLRIDLVAAFLKEQQPDVLCLQETK 120 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 FP + + + +AV K V + D Sbjct: 121 CP---DDAFPLKRFKQL------GYEHIALNGQKGYHGVAVISKIPFVARDIRIFCDNLD 171 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 S + + + ++ + D + +P +K Sbjct: 172 SRH-------ISVSLGTGDNDPPLVLHNFYVPAGGDVADPELNPKFKHKLSFLDEMKACE 224 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPK 239 ++ GD N + + + + Sbjct: 225 PLHPSGDARHILVGDLNVAPHEHDVWSHKQLLKVVSHTPVECEKLLAVLRAGNWVDVARD 284 Query: 240 EKDSRCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + +D+ + + + Sbjct: 285 RIPLSEKIYTWWSYRAADWTVGDRGRRLDHIWVSEALRTR-------VTDFKILRDARSW 337 Query: 290 KRLSDHCPISIDYD 303 +R SDH P+++ + Sbjct: 338 ERPSDHVPVTVTME 351 >gi|326386341|ref|ZP_08207964.1| exodeoxyribonuclease III [Novosphingobium nitrogenifigens DSM 19370] gi|326209002|gb|EGD59796.1| exodeoxyribonuclease III [Novosphingobium nitrogenifigens DSM 19370] Length = 267 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 85/310 (27%), Gaps = 72/310 (23%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + A +++ S+NIN + L ++ + DI LQE+ + Sbjct: 2 SEKRASSIKVASFNING----------------IKARLPRLIEWLEETQPDIACLQEIKT 45 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV-RVLQQSYPLLGAKD 135 + + I + +A+ + V Q +D Sbjct: 46 QDE----------GFPAADFAAIGYEAIWHGQKGFNGVAILARGERPVEVQRGLAGEPED 95 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 SR +E + + V+ I+L + + Y + + LK + Sbjct: 96 EHSRY---------LEADVMGLRVVCIYLPNGNPQPGPKFDYK------LRWMERLKTRM 140 Query: 196 TQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPK 239 Q VP ++ GD+N + + + + + Sbjct: 141 AQIAAEEVPALVIGDYNVIPRDNDIWSTRAMADDALMQPESRAAYRRLLHAGWTDALGLL 200 Query: 240 EKDSRCNANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID+ ++ L+ D ++ Sbjct: 201 NPRGGVYTFWDYQAGAWQRDHGFRIDHALLSPELADRLVAAGV-------DKTYRGREKA 253 Query: 293 SDHCPISIDY 302 SDH P+ + Sbjct: 254 SDHAPVWVSI 263 >gi|331018945|gb|EGH99001.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 380 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 43/342 (12%), Positives = 101/342 (29%), Gaps = 75/342 (21%) Query: 11 FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53 C+ +V Q +++++WNI L+ + + + + Sbjct: 52 LLTASCSTAVQAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTPEDLAYN 111 Query: 54 YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99 + + ++ DIV LQ + +A ++P +T ++ E + Sbjct: 112 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYQDQQKLLQERLADLYPCSTQAFYWKAEFVP 171 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKI 157 + S R + P+ A + + A+ + +G K+ Sbjct: 172 SPHIWGS-VGRKLTTLSRFHIDSAERLQLPMPDANIISRQFQPKNALLVSYLPLRDGGKL 230 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-- 215 V++ HL + D +Q + +++ + P++I GDFN Sbjct: 231 AVINTHLATAKPGDG----------TAQKQIASTETLLSKLEGGGTPWLIGGDFNLLPLG 280 Query: 216 ----------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-KNLRNKIPI------- 257 + + + + + + + + + N I Sbjct: 281 QYQRLPEQQRHGYAADSELHALWEKYPMIPNNTESSGTDRSQWLTHFPNDNRINGPDRTV 340 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 DY + + S + +SDH P+ Sbjct: 341 DYLFYSPSLKR----VSARV-------RRDDTLLISDHLPVI 371 >gi|330466791|ref|YP_004404534.1| exodeoxyribonuclease III Xth [Verrucosispora maris AB-18-032] gi|328809762|gb|AEB43934.1| exodeoxyribonuclease III Xth [Verrucosispora maris AB-18-032] Length = 265 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 73/301 (24%), Gaps = 69/301 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N + L + + D+V LQE + Sbjct: 1 MRLATWNVN----------------SVKARLPRLLDWLAGTEPDVVCLQETKCPDGA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ ++ +A+ + + F R Sbjct: 42 -------FPVAEVGDLGYTVASHSDGRWNGVAILSRIGLSDVTVG--FPGEPGFPEPEAR 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + V +++ + D Y + L+D + + Sbjct: 93 AIAATC-----DGVRVWSVYVPNGRTPDDPHYAYKLA------WLAALRDALDAELTDGR 141 Query: 204 PFVIAGDFNRKINYLGNNDDFW--------------KTIDPNDSLIRFPKEKDSRCNANK 249 + GDFN D + L+ + Sbjct: 142 ALAVCGDFNVAPTDDDVWDPALFATSTHVTPAERAALAALRDLGLVDVVPTPMKGPHPFT 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + ID + + D +G+ SDH PI + Sbjct: 202 YWDYRAGMFHQNKGMRIDLVYASAPFAR-------TVSSAYVDREARKGRSPSDHAPIVV 254 Query: 301 D 301 D Sbjct: 255 D 255 >gi|312885637|ref|ZP_07745272.1| exodeoxyribonuclease III [Mucilaginibacter paludis DSM 18603] gi|311301844|gb|EFQ78878.1| exodeoxyribonuclease III [Mucilaginibacter paludis DSM 18603] Length = 257 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 83/302 (27%), Gaps = 70/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N ++ +L ++ D+V LQE Sbjct: 1 MKIATYNVNGVNG----------------RLPVLLRWLNQTTPDVVCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +A+ +N+++ + L G + +R Sbjct: 35 LKAPQEKFPEQAIADAGYQAIWHGQKSWNGVAILTRNLQIKEIGRALPGDPEDMH---SR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ I + ++L + + Y Q + LK + Sbjct: 92 YIEAVV-----NGIHIGCLYLPNGNPAPGPKFDYK------LQWFERLKSHAASLLAAGT 140 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD+N L +K + K S+ Sbjct: 141 PVVLTGDYNVMPTELDVYKPERWLDDALFRPETRAAFKDLVDQGWTDAIRKLYPSQKIYT 200 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+F++ L+ D ++ SDH P+ I Sbjct: 201 FWDYFRDAYGRDAGLRIDHFLLSPQLDGRLLAAGV-------DRNVRGWEKTSDHAPVWI 253 Query: 301 DY 302 + Sbjct: 254 EL 255 >gi|282901543|ref|ZP_06309465.1| Exodeoxyribonuclease III xth [Cylindrospermopsis raciborskii CS-505] gi|281193586|gb|EFA68561.1| Exodeoxyribonuclease III xth [Cylindrospermopsis raciborskii CS-505] Length = 260 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 83/301 (27%), Gaps = 65/301 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N + + + + D++ LQE KV Sbjct: 1 MKIATWNVN----------------SIRTRLGQVISWLGENNVDVLCLQE-------TKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + A+ R+ V +L + R Sbjct: 38 IDTDFPLTVFHDMGYHTYIYGQKAYNG-VALISRQPMKSVSTGFCQVLENLEPEWDDQKR 96 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ K+ ++++++ + + S + Y Q LK ++ +S Sbjct: 97 VITGIV-----DKVRIINLYVPNGSAVGSEKYQYK------LQWLAVLKTYLEVLLKSNS 145 Query: 204 PFVIAGDFNRKINYLGNNDD-------FWKTIDPNDSLIRFPKEKDSRCN-------ANK 249 ++ GDFN + + ++ Sbjct: 146 DVIMCGDFNIALEDIDIYKQVDTENQIMASLLERKALREILNLGFGDGFRKFNSQGGNYS 205 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ + YK D + ++ SDH P+ + Sbjct: 206 WWDYRTGAFKRNSGWRIDHHYLTDVLYKQAKSCLI-------DISPRKLEQPSDHAPVVV 258 Query: 301 D 301 + Sbjct: 259 E 259 >gi|220911407|ref|YP_002486716.1| exodeoxyribonuclease III Xth [Arthrobacter chlorophenolicus A6] gi|219858285|gb|ACL38627.1| exodeoxyribonuclease III Xth [Arthrobacter chlorophenolicus A6] Length = 268 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 29/306 (9%), Positives = 75/306 (24%), Gaps = 67/306 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + + + + D D++ +QE + Sbjct: 1 MKIATWNVNSL----------------RARADRVEAWLQRSDCDVLAIQETKCKDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ + + L + Sbjct: 41 ------NFPWELFERMGYEVAHFGVNQWNGVAIASRVGLEDVERTFLDQPAFGKAGKDPV 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCF-LDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + + G + + +++ + D L AQ L + Sbjct: 95 QEARAMAATCGG-VRIWSLYIPNGRSLDDEHMPYKLKWLESLKSHAQSLV-----TENPE 148 Query: 203 VPFVIAGDFNRKI-----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + GD+N + + + Sbjct: 149 AQVALMGDWNIAPFDDDVWDIDLFVNNGYTHVSPPERAAFHAFETAGFTDVVRPYTPGP- 207 Query: 246 NANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 ID+ + + + S D + +GK SDH Sbjct: 208 GVYTYWDYTQLRFPKKEGMRIDFVLASKALASRVTGASI-------DREERKGKGASDHA 260 Query: 297 PISIDY 302 P+ ++ Sbjct: 261 PVLVEL 266 >gi|85710025|ref|ZP_01041090.1| exonuclease III [Erythrobacter sp. NAP1] gi|85688735|gb|EAQ28739.1| exonuclease III [Erythrobacter sp. NAP1] Length = 262 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 33/306 (10%), Positives = 80/306 (26%), Gaps = 72/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + +WNIN ++ +Y K D++ LQE+ + + Sbjct: 2 LSVATWNIN----------------SARLRLPIIEKYLKAEAPDVLCLQEIKCESHL--- 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + S + +A + + + Sbjct: 43 ------FPAEALAEMGYEHQAISGQKGYHGVATVSRVPIREISRHDWQDNGE-------- 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + VE+ GK + + ++++ + + Q+ +L + Sbjct: 89 -ARHVGVEVVGKDMLIENVYVPAGGDIPD-----REKNVKFGQKLDFLGRMTKWADKVDK 142 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P +I GDFN + + + D + + + Sbjct: 143 PTLIVGDFNIAPLESDVWSHKQLLKVVSHTPIEVETLQRFKDAHGWVDIGREHIRDPERY 202 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ E ++ SDH P Sbjct: 203 YSWWSYRSPDWRKNDRGRRLDHMWASPELAAQAKAHRLLEE-------ARSWEKPSDHIP 255 Query: 298 ISIDYD 303 + ++D Sbjct: 256 LVTEFD 261 >gi|313895351|ref|ZP_07828908.1| exodeoxyribonuclease III [Selenomonas sp. oral taxon 137 str. F0430] gi|312976246|gb|EFR41704.1| exodeoxyribonuclease III [Selenomonas sp. oral taxon 137 str. F0430] Length = 250 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 79/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R VSWN+N L ++ K LDAD LQE + Sbjct: 1 MRFVSWNVNGLRAALKKGFMES---------------FKELDADAFCLQETKMQEG-QAI 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + + + A+ + + + D+ R Sbjct: 45 LDLPGYEQYFYSAEKKGY----------SGTAIFTRVKPLSVARGIGIPQHDNEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++++ ++ + + + L+ S Sbjct: 91 -----VITMEFDDLYLVTVYTPNSQNALARLDYRMAWEDAFRAFLLELR--------SKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + + F + A Sbjct: 138 PVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGKFGELLAAGFVDTFRALYPDKVGAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ + + ++ SDHCP+S Sbjct: 198 TWWSYLRHARETNAGWRIDYFLVSEELRGRIAAAEIHADVF-----------GSDHCPVS 246 Query: 300 IDYD 303 + Sbjct: 247 LTLS 250 >gi|269127062|ref|YP_003300432.1| endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM 43183] gi|268312020|gb|ACY98394.1| Endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM 43183] Length = 644 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 86/304 (28%), Gaps = 64/304 (21%) Query: 5 YVLALVFFLVPCTASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 VL L T A+ +R++++NI+ D L Sbjct: 393 LVLLAGTLLFTVTNPKAEPRAADPARLRVLTYNIHH-----------GVNAAGKLDLDAL 441 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + AD+V LQE+G + + T + + RL H D A+ Sbjct: 442 AAVIERQRADVVLLQEVGRGS----LVSGTTDVGVWLSRRLGMHLIWGPAADGQFGNAIL 497 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + S + + R V +++ G+ ++V HL Sbjct: 498 TSRRVLSSGSARMPKG----DWSQIRGYVWARLDVGGRPVYVWSTHLDGGA--------- 544 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + + + A L+ W +I GD N + + +D Sbjct: 545 DRAAARQREIAALLRAW-----GGAPRTIIGGDMNSEPGSAE----MSRFLDGTGLRASA 595 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + A K +D+ + + + SDH P Sbjct: 596 LGDYAPTTPAGKK------VDWILGTDDL----VFSDHGVHPSKT----------SDHYP 635 Query: 298 ISID 301 +++ Sbjct: 636 VAVT 639 >gi|240138687|ref|YP_002963159.1| hypothetical protein MexAM1_META1p2085 [Methylobacterium extorquens AM1] gi|240008656|gb|ACS39882.1| hypothetical protein, putative 5'-nucleotidase domain [Methylobacterium extorquens AM1] Length = 2794 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 41/350 (11%), Positives = 87/350 (24%), Gaps = 72/350 (20%) Query: 19 SVAQKVRLVSWNINTLSEQEG-----------VSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 V +++ S N+ NS + L AD Sbjct: 1279 PVGGTLKVGSLNVLNYFTTLDTGSAARTAIGLEPRGANSPEELARQTEKLVTTLIGTGAD 1338 Query: 68 IVFLQEMGSY-------NAVAKVFPKNTWCIFYSTERLINHSKRD------SNNDIHTAI 114 ++ L E+ + NA+ + + T +N + + I Sbjct: 1339 VLGLTEIENQFRPGDPGNALEHLVGQLNLRAGAGTYASVNPGAQLDQGQFLGGDAIAVGF 1398 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN------------------RRAVELLVE--ING 154 + V V + + R A+ + G Sbjct: 1399 IYKPSKVSVAMNTTIERLDDTDVAAFNPALLERSTIGHLFNGANTSRAALAVTFNEIATG 1458 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVP--FVI 207 + + H KS + + QQ A L W++ + ++ Sbjct: 1459 EDFTAIITHFKSKGGTGTGADADQGDGQGAWQQQRELAATALAQWVSMRPTGTQDSDTLL 1518 Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 GDFN + + I +++ + + +D+ + + Sbjct: 1519 LGDFNAYLKEDALD------ILKAAGFTNLAEDRLANPYSYVFDGAYGALDHALASASLN 1572 Query: 268 KFLIQESFSEILYNEDDIKSRGKRL---------------SDHCPISIDY 302 + + + I +E D SDH P+ + Sbjct: 1573 RQVTGVTEWHINADEADAIDYNLDFGRSPSSFDGRSPARESDHDPVLVGL 1622 >gi|118385793|ref|XP_001026022.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila] gi|89307789|gb|EAS05777.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila SB210] Length = 354 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 91/320 (28%), Gaps = 49/320 (15%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL--LRQYAKNLDADIVFLQEMGSYN 78 + ++ + S+NI + + DY + + K +++DIV LQE Sbjct: 12 SNQISITSYNILADLYTDPWYFPYCPKQYLNFDYRKWKIVEEIKLINSDIVCLQEADHIE 71 Query: 79 AVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + F + I Y+ + + ++V P K ++ Sbjct: 72 DFYYQQFQDLGYQIQYALKPYRAEGILVMFKKDK--FKMISEHVINFDNEIPDTFNKANY 129 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R N ++L I+ I + + HL + + Q + +T+ Sbjct: 130 QRNNNALIIQLKHLISDLNIVIANTHLFWNP----------QNEEVKLLQTAQILQHLTK 179 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWK------------------------------- 226 + ++ GDFN K Sbjct: 180 NYKQDENIILCGDFNSMPTSNVIKYITDKKEPHLSRVEKQFAKYVLIKDMMAIHNMFSEM 239 Query: 227 -TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ--ESFSEILYNED 283 ID S + K N K +DY + + N +F + L + Sbjct: 240 NLIDLKSSYDDYLKTGKHPEFTNYTQNFKGTLDYILFNPNMKQFQLSEVREIPIDLIKKQ 299 Query: 284 DIKSRGKRLSDHCPISIDYD 303 SDH PI+ + Sbjct: 300 KGLPSQDYPSDHLPITAIFS 319 >gi|300777930|ref|ZP_07087788.1| possible exodeoxyribonuclease III [Chryseobacterium gleum ATCC 35910] gi|300503440|gb|EFK34580.1| possible exodeoxyribonuclease III [Chryseobacterium gleum ATCC 35910] Length = 259 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 83/303 (27%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N ++ +L ++ K DIV LQE Sbjct: 1 MKIATYNVNGVNG----------------RLPVLLKWLKEASPDIVCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ KN + + L G D +R Sbjct: 35 LKAPQERFPLQEINNAGYQAIWNGQKSWNGVAILAKNKEITEVQRSLPGDPD---DIQSR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ ++ + ++L + + Y S + K Q + + Sbjct: 92 YIEAII-----DQMVICCLYLPNGNPYPGPKFDYKLS------WLKRFKKRTDQLIKMEL 140 Query: 204 PFVIAGDFNRKIN-------YLGNNDDFWKTIDPNDSLIR------------FPKEKDSR 244 P ++ GDFN ND ++ +P EK Sbjct: 141 PAILIGDFNIIPEPIDVHKPERWENDALYRVEVRKAYKDLQKKGWLDSIRSLYPGEKIYT 200 Query: 245 CNANKNLRNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +D+ ++ L D ++ SDH P+ I Sbjct: 201 FWDYLYKAYDRNAGIRLDHILLSPYLQSRLQSGGV-------DRQVRGWEKSSDHAPVWI 253 Query: 301 DYD 303 + Sbjct: 254 ELS 256 >gi|167648964|ref|YP_001686627.1| exodeoxyribonuclease III Xth [Caulobacter sp. K31] gi|167351394|gb|ABZ74129.1| exodeoxyribonuclease III Xth [Caulobacter sp. K31] Length = 268 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 31/305 (10%), Positives = 76/305 (24%), Gaps = 67/305 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N ++ D++ LQE+ Sbjct: 3 LRIATWNVN----------------SVRLRAEQAARFVDEQAPDVLCLQEIKCQEG---- 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + +D+ + R Sbjct: 43 -----EFPREAFVAMGLPHLKIMGQKGWHGVAIASRLPI-----------EDAPALNACR 86 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + + + ++ + D+ + +P + L + ++ + Sbjct: 87 EGHARCVSGKIAGVEIHNFYIPAG--GDTPDRALNPKFDHKLDFYETLTAEMKKR-DPKA 143 Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N F + D L Sbjct: 144 PLILTGDLNVAPGENDVWSHRQMSKIVSHTPVELEAFAGLVGSIDFLDLPRLATPEPEKL 203 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + I + ++ D +R SDH P Sbjct: 204 FSWWSYRAADFRKSNRGLRLDHILASPGLRDAAIIDG--KVSSKVHDTVREWERPSDHAP 261 Query: 298 ISIDY 302 ++ D Sbjct: 262 VTADL 266 >gi|86134605|ref|ZP_01053187.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter sp. MED152] gi|85821468|gb|EAQ42615.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter sp. MED152] Length = 325 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 34/314 (10%), Positives = 79/314 (25%), Gaps = 48/314 (15%) Query: 25 RLVSWNINTLSEQEGVSLWKNSV-----------KRTTSDYTLLRQYAKNLD-------A 66 + +N+ L + + R L L Sbjct: 16 TIAFYNVENLFDTVDNPNTADDDYTPSGKKKWTINRYNIKIKKLSSIIAQLGLNKSKYPP 75 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK-KNVRVLQ 125 IV L E+ + V+ + + + + I A+ K + Sbjct: 76 AIVGLVEVENAKVVSDLANSSYLKKHHYGFVHYDSPDE---RGIDVALLYNKISFELIAS 132 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 ++YP+ D R R +++ ++G+ + ++ H S + + + Sbjct: 133 ETYPVFLEDDEGERDYTRDILKVSGHLHGELVHIIVTHWSSRREGVAETEHKRIAAAEKI 192 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ KE +I GDFN + + + + Sbjct: 193 REITA----GIHAKEMGPKIIIMGDFNDDPKSKSVKEYL---VKDDFYNPMEKILNPTSK 245 Query: 246 NANKNLRNKIPIDYFVMDQNAYK-------------------FLIQESFSEILYNEDDIK 286 + + D + +N + + + + Sbjct: 246 GSLTYNGSWNLFDQIIFSKNFLVEEKDKLYFKHAEVFNKKWMKIYKGKYKGSPFRTYIGP 305 Query: 287 SRGKRLSDHCPISI 300 SDH P+ Sbjct: 306 WYKGGFSDHFPVYA 319 >gi|110635562|ref|YP_675770.1| exodeoxyribonuclease III Xth [Mesorhizobium sp. BNC1] gi|110286546|gb|ABG64605.1| exodeoxyribonuclease III Xth [Chelativorans sp. BNC1] Length = 284 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 30/312 (9%), Positives = 82/312 (26%), Gaps = 70/312 (22%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 ++ ++ +WNIN L+ ++ + D++ LQE Sbjct: 15 PELSMPFKVATWNIN----------------SVRLRLPLVLRFLEQYQPDVLCLQETKCP 58 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + R + + + +A + + + G D Sbjct: 59 DD----------QFPTAAFRKVGYGHVEIHGQKGYHGVATISRLPLEVVERRSFCGLTDC 108 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + L ++G+++ + + ++ + D + +P Q ++D I Sbjct: 109 RH-------LSTLTNVDGRRVLLHNFYVPAG--GDEPDPEINPKFRHKLDFLQEMRDIIP 159 Query: 197 QKKESLVPFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKE 240 ++ ++ GD N + ++ + + + Sbjct: 160 T-LDANTGSILVGDLNVAPLETDVWSHKQMLNVVSHTPVETEGLESVRKGGGWVDLMRRH 218 Query: 241 KDSRCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + +D+ + L + Sbjct: 219 IPPEEKLFTWWSYRAKDWSLSNRGRRLDHVWSSDDLAPALS-------RVDVLRDARGWD 271 Query: 291 RLSDHCPISIDY 302 R SDH P+ + Sbjct: 272 RPSDHVPVIAAF 283 >gi|262369657|ref|ZP_06062985.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262315725|gb|EEY96764.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 817 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 91/331 (27%), Gaps = 50/331 (15%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY----TLLRQYAKNLDADIVFL 71 A Q+VR+ ++N+ + +++ + K +DAD+ L Sbjct: 453 VPAKATQQVRIAAFNVLNYDNGLAQGFPTERGASSEAEFKKQHQKIVSALKAIDADVYGL 512 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 E+ + + S + + D A+A+ RV + Sbjct: 513 MEIANNGYGERSAVAYLAQALGSDWKYVIPPNADKLGTDAIAVAIIYNAKRVKP---INV 569 Query: 132 GAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPS--------C 181 A NR + + GK V+ HLKS + + Sbjct: 570 AAVFDDQSQKNRVTMAQTFQALSGGKTFTVIPNHLKSKGSCPDDKISIEADQGDGQGCWN 629 Query: 182 SLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + Q L W+ + S ++ GD N D N ++ + Sbjct: 630 PTRVKAVQTLMQWVAKNPTQVSKPNVLLLGDLN----SYAKEDPILALEQANYKVLLNDE 685 Query: 240 EKDSRCNANKN----------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +D+ + D Y + + I +E Sbjct: 686 KIGQGKAAYSYVFGVASNAQGYGGAGNLDHAIADAALYPLVKKAFALHINADEPTALDYN 745 Query: 290 -----------------KRLSDHCPISIDYD 303 R SDH P+ +D D Sbjct: 746 EEYKTEEQIAAFYADDAYRSSDHDPVIVDLD 776 >gi|296161285|ref|ZP_06844093.1| exodeoxyribonuclease III Xth [Burkholderia sp. Ch1-1] gi|295888443|gb|EFG68253.1| exodeoxyribonuclease III Xth [Burkholderia sp. Ch1-1] Length = 270 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 79/303 (26%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NIN S L Q+ + DIV LQE+ + ++ Sbjct: 4 LRIATFNING----------------IRSRLPALLQWLEREAPDIVCLQELKAADSA--- 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + +A+ K L+ L G +D Sbjct: 45 -------FPVEELRDAGYGAIWQGQSAWNGVAILAKGEAPLESRRGLPGFEDDTHSRYLE 97 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 AV I V ++L + + Y + L + +S Sbjct: 98 AAV--------GGIVVACLYLPNGNPQPGPKFDYKLA------WFGHLIRHAAKLYKSGH 143 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGDFN + ++ + + Sbjct: 144 PVVLAGDFNVVPTDEDIYNPRSWLKDALLQPESRERYRQLLAQGWTDALRTHFGAERVYT 203 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ + L D SDH P + Sbjct: 204 FWDYFRRHWETNSGLRIDHVLLSADLAPRLRDAGV-------DRWVRGEPHASDHAPAWV 256 Query: 301 DYD 303 + + Sbjct: 257 ELE 259 >gi|283457216|ref|YP_003361786.1| exonuclease III [Rothia mucilaginosa DY-18] gi|283133201|dbj|BAI63966.1| exonuclease III [Rothia mucilaginosa DY-18] Length = 309 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 28/314 (8%), Positives = 76/314 (24%), Gaps = 66/314 (21%) Query: 15 PCTASVA-QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 C+A + +++ +WNIN + + + D D++ LQE Sbjct: 34 ACSAPAKLEGMKIATWNIN----------------SIRARENRVEDWLDEHDVDVLALQE 77 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + + + + + +A+ + Q Sbjct: 78 TKTKDE----------TFPFDLFEFMGYEVAHFGLNQWNGVAIASRVGLEDVQRG-FDNQ 126 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + + V +++ + L Y + L+ Sbjct: 127 PHFGKPGEPEVLEARAIGATCGGVRVWSLYVPNGRGLTDPHMDYK------LHWMEALRQ 180 Query: 194 WITQKKESLVP--FVIAGDFNRKINY-----------------LGNNDDFWKTIDPNDSL 234 + + + + GD+N + + + Sbjct: 181 NVHNELAANPQSQLALVGDWNVAPEDADVWDIDYFLRNEMTHVSEPERCAFAALLEEGMV 240 Query: 235 IRFPKEKDSRCNANKNLRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + ID+ + + + D ++ Sbjct: 241 DVVRPHTPGEYTYWDYQAGRFTKDEGMRIDFQLFSPALAARVERAWI-------DKVERA 293 Query: 289 GKRLSDHCPISIDY 302 G+ SDH P+ ++ Sbjct: 294 GEGASDHTPVVVEI 307 >gi|260463071|ref|ZP_05811274.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075] gi|259031192|gb|EEW32465.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075] Length = 256 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 80/301 (26%), Gaps = 70/301 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN ++ L + D+V LQE+ + + Sbjct: 1 MKIATFNINNINS----------------RLENLLAWLAAARPDVVCLQELKARD----- 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ + + L G +R Sbjct: 40 -----MQFPRTALADAGYGAVWKGEPTWNGVAILARGAEPILTRDALPGD---DGDKQSR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + I + ++ + + Y + L Q ++ + Sbjct: 92 YIEAAV-----NGIVIACLYAPNGNPRPGPKFQYKLAWHER------LNAHAEQLIDTGL 140 Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P V+AGD+N + F ++ + K + Sbjct: 141 PVVLAGDYNIVPEPRDIYATRSYDDNALVQPESRAAFAALLEQGWTDALRKKHPNETLYT 200 Query: 248 NK-NLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 RN+ +D+ ++ + + L D SDH P+ + Sbjct: 201 FWDYRRNRWPRDAGLRLDHILLSKTLARRLKGAGI-------DRDVRGQDGASDHAPVWV 253 Query: 301 D 301 + Sbjct: 254 E 254 >gi|325286474|ref|YP_004262264.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489] gi|324321928|gb|ADY29393.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489] Length = 311 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 37/320 (11%), Positives = 82/320 (25%), Gaps = 51/320 (15%) Query: 24 VRLVSWNINTLSEQEGVSL-----------WKNSVKRTTSDYTLLRQYAKNLD------- 65 V + +N+ L + + + R L + + Sbjct: 2 VTIAFYNLENLFDTIDDPTTLDDDFTPKGEKRWTNNRYKKKVFKLTKTISEIGTHNTKEP 61 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 ++ + E+ + N V + + + I T + K VL Sbjct: 62 PVLIGIAEVENENVVKDLVTNSNLERINYDYVHYDSPDE---RGIDTGLIYNKDYFTVLH 118 Query: 126 Q-SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD-SLENTYSPSCSL 183 + + R + + ++NG+++ V H S + + + + Sbjct: 119 SEPIHVHIINTNGDVDNTRDILYVHGKLNGEEVHVFVNHWPSKREGKITTDYKRIEAAKV 178 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 L +++ K +++ GDFN N S EK Sbjct: 179 LINFMAKIEE-----KNPNPNYIVMGDFNDSPKSDSIQTLMDTNKFYNPSEHLLTFEK-- 231 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLI-------------------QESFSEILYNEDD 284 + R D ++ + + F + Sbjct: 232 --GSASYKRKWSLFDQIIISHSFLNYEKGTHSFLEANIFDEHFLTEFDGKFKGTPFRTYV 289 Query: 285 IKSRGKRLSDHCPISIDYDF 304 + SDH P+ I + Sbjct: 290 GRKYVGGYSDHFPVFIQLKY 309 >gi|229818864|ref|YP_002880390.1| 5'-Nucleotidase domain protein [Beutenbergia cavernae DSM 12333] gi|229564777|gb|ACQ78628.1| 5'-Nucleotidase domain protein [Beutenbergia cavernae DSM 12333] Length = 1577 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 93/342 (27%), Gaps = 64/342 (18%) Query: 19 SVAQKVRLVSWNINTLSEQ----------------EGVSLWKNSVKRTTSDYT------- 55 + VRL S+N+ +GV++ + +R D Sbjct: 496 TGDDAVRLASFNVLNYFTTLGTDGATCVPYTDRAGDGVTVEEGCDQRGAWDAEDFQRQQD 555 Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN-------- 107 + LDAD+V L E+ + A+ + + + + Sbjct: 556 KIVAAINGLDADVVGLMEIENSAALGETADEALGALVAALNAAAGADVWAFVPSSAELPP 615 Query: 108 ----NDIHTAIAVRKKNVRVLQQSYPL-LGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 + I AI R V + + L + + A R + + G V + Sbjct: 616 VELQDVITNAIIYRPGAVTPVGEPRALGTQSAEGQPFANAREPIGQVFAPAGGGEDVFVV 675 Query: 163 HLK--------SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 + + S + QA L+DW+ Q + + GDFN Sbjct: 676 VNHFKSKGSPGPLPGDEDSGDGQGASNASRVAQATALRDWVGQVAAADDAVALLGDFNSY 735 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 + + ++ + R +D+ +++ A Sbjct: 736 GQEDPLHVLYDAGYTDVEAHFDVDGS------SYSFGRQSGSLDHVLLNAPALARATGAD 789 Query: 275 FSEILYNEDDIKSR--------------GKRLSDHCPISIDY 302 EI E R SDH P+ + Sbjct: 790 IWEINSGEAVALEYSRHNYHGTLFYDATAYRSSDHDPVLVGL 831 >gi|305667408|ref|YP_003863695.1| hypothetical protein FB2170_14213 [Maribacter sp. HTCC2170] gi|88709456|gb|EAR01689.1| hypothetical protein FB2170_14213 [Maribacter sp. HTCC2170] Length = 252 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 39/286 (13%), Positives = 83/286 (29%), Gaps = 42/286 (14%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 +++NI ++++ V+ W + L + ++ + I QE + Sbjct: 1 MTYNIKYDNKKDTVNNWNDRK-------ASLVRLIRHYEPSIFGTQEALHHQVKYIDEEL 53 Query: 87 NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD----SFSRAGN 142 + S+ + K + ++ L + + + Sbjct: 54 PDFSFIGVGRDDGKQKGEYSSIHYN-----HTKYKVLSSNTFWLSKTPNKISVGWDASME 108 Query: 143 RRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R L E +V + H + A+ + I + Sbjct: 109 RICTYGLFEELETSNTFYVFNTHFDH------------RGKKAREKSAKLILKKIKKINS 156 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-KNLRNKIPIDY 259 S +P ++ GDFN +D D+ + N ++ IDY Sbjct: 157 SNLPVILMGDFNLNPVEKPIKSIKKVMVDGLDATQKPFYGPSGTFNGFNPTMKLDNRIDY 216 Query: 260 FVMDQNAYKFLIQESFSEILYN-EDDIKSRGKRLSDHCPISIDYDF 304 + ++ Y DD K +SDH P+ I ++ Sbjct: 217 IFV----------KNIKVKSYTHIDDRMENNKHISDHLPVLIHIEY 252 >gi|107022880|ref|YP_621207.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU 1054] gi|116686877|ref|YP_840124.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia HI2424] gi|105893069|gb|ABF76234.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU 1054] gi|116652592|gb|ABK13231.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia HI2424] Length = 263 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 81/280 (28%), Gaps = 56/280 (20%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + +R+ ++NI+ + + LDAD++ LQE+ Sbjct: 26 GRDLRIATYNIHG-----------GYGAWSARAVDRIAAVIDELDADVIALQEVPLGGTR 74 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 P + +T + AV + ++ L SF Sbjct: 75 ---APDVLAHLRDATGMHAAAGPTIDTPERRYGNAVLSRCPIRAARTLDL-----SFHPR 126 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R A++ ++ + I V+ HL S S S Q Q L + Sbjct: 127 EPRGALDADIDCSTGPIRVVATHLGL-------------SASERSAQVQRL---LAAFDT 170 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 +P ++ GD N + F + + RF + R +D Sbjct: 171 GAMPVILLGDIN---------EWFVRGRALQALVTRFRRAPAPRTFPTVCPVFS--LDRI 219 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ++ +R + SDH P+ Sbjct: 220 WIHPG----------ELLVDVVVHRSARARHASDHYPLVA 249 >gi|295681288|ref|YP_003609862.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002] gi|295441183|gb|ADG20351.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002] Length = 290 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 88/313 (28%), Gaps = 58/313 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 +RLV WNI +G D + + A+ L D D++ LQE+ Sbjct: 1 MRLVDWNIQWGCGVDG-----------RVDLGRIVREARALCDFDVLCLQEVTRGFNEEP 49 Query: 75 --------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 S + A++ S S + A+ + Sbjct: 50 AAGGLKGAPSSDQFAELAALLPEMTVLDAIGSDLPSLGASRHRRQFGNAIVTRLPVRQVL 109 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 + L D + R A+E ++E + + V+ HL+ + + L Q Sbjct: 110 RHSLPWPADPAKPSMLRVALEAVLETDVGPLRVISTHLEFYS--EKQRLAQVARLRELHQ 167 Query: 187 QAQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 +A + ++ PF V+ GDFN D + + Sbjct: 168 EACDHARSPARGEKPDSPFADTARPLSAVVCGDFNSAFEDTAFCRMLEPIADAPTFVDAW 227 Query: 238 PKEKDSRCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A D+ + Q+ + Sbjct: 228 ARAHPGEPRAATVGLYDHEQWPDGPFACDFVFVTQDLGTRIASCEV-----------DPH 276 Query: 290 KRLSDHCPISIDY 302 R SDH P+ ++ Sbjct: 277 SRSSDHQPMWLEL 289 >gi|226531290|ref|NP_001144669.1| hypothetical protein LOC100277695 [Zea mays] gi|195645474|gb|ACG42205.1| hypothetical protein [Zea mays] gi|238007716|gb|ACR34893.1| unknown [Zea mays] Length = 373 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 45/335 (13%), Positives = 93/335 (27%), Gaps = 72/335 (21%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + + ++WN N+L + R SD+ Q LD D++ +QE+ Sbjct: 46 PTEEPFKFLTWNANSL------------LLRMKSDWPAFSQLVARLDPDVICVQEVRMPA 93 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 A +K PKN + ++ ++ +A + V G Sbjct: 94 AGSKGAPKNP--SELKDDTSLSRDEKQVVLRALSASPFKDYRVWWSLSDSKYAGTAMFIK 151 Query: 139 RAGNRRAVELLV-------EINGKKIW--VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + + V + E +G+ I L + ++ + + + Sbjct: 152 KKFEPKKVSFNLDRTSSKHEADGRVIIAEFESFLLLNTYSPNNGWKEEENAFQRRRKWDK 211 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINY-------------------------------L 218 + +++ P + GD N Sbjct: 212 RMLEFVQHV---DKPLIWCGDLNVSHEEIDVSHPDFFSSAKLNGYTPPNKEDCGQPGFTP 268 Query: 219 GNNDDFWKTIDPNDSLIRFPKEK----------DSRCNANKNLRNKIPIDYFVMDQNAYK 268 F + + + S K ++ IDYF++ + Sbjct: 269 AERRRFGNILFQGKLVDAYRHLHKEKDIDGGFSWSGHPIGKYRGKRMRIDYFLVSEQLKD 328 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ D G SDHCP+S++ Sbjct: 329 RIVSCEMHGRGIELD-----GFYGSDHCPVSLELS 358 >gi|189460159|ref|ZP_03008944.1| hypothetical protein BACCOP_00795 [Bacteroides coprocola DSM 17136] gi|189433149|gb|EDV02134.1| hypothetical protein BACCOP_00795 [Bacteroides coprocola DSM 17136] Length = 253 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 80/305 (26%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L R+ LDAD LQE Sbjct: 3 MKLISWNVNGLRACCDKGF---------------REIFNELDADFFCLQETKMQEG-QLD 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ ++ + + D R Sbjct: 47 LAFEGYTSYWNYAEKKGY----------SGTAIFTRHQPLSVTYGLGIDEHDHEGR---- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + + L + Sbjct: 93 -----VITLEMENFYLVTVYTPNSQDGLKRLDYRMTWEEDFRKYLLQL--------DRQK 139 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + ++ + + F ++ N Sbjct: 140 PVLVCGDLNVAHKEIDLKNPKTNRMNAGFTDQEREKFQLLLDAGFIDTFRHFYPTQENIY 199 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ L ++ SDHCP+ Sbjct: 200 SWWSYRFKAREKNAGWRIDYFLASSRIADKLQDAKIHTEIF-----------GSDHCPVE 248 Query: 300 IDYDF 304 + ++ Sbjct: 249 VTINW 253 >gi|88801882|ref|ZP_01117410.1| hypothetical protein PI23P_04447 [Polaribacter irgensii 23-P] gi|88782540|gb|EAR13717.1| hypothetical protein PI23P_04447 [Polaribacter irgensii 23-P] Length = 350 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 41/349 (11%), Positives = 86/349 (24%), Gaps = 56/349 (16%) Query: 1 MIRKYVLALVFFLVPCTASVAQK---VR-LVSWNINTLSEQEGVSLWKN----------- 45 M +K L+L+ C A +K +R + +N+ L + + Sbjct: 1 MRKKIALSLLLITSLCAAYGQEKKYAIRTVAFYNLENLFDTINDPTMNDEASPMMELKFN 60 Query: 46 SVKRTTSDYTLLRQYAKNLD-------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 L + I+ + E+ + + + + Sbjct: 61 RSAVYWDKIEKLASTIAQIGLEKSKTSPAIIGVAEVENRSVLEDLIKS---KYLIKNNYG 117 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 I H I A+ +KK + + R + + ++ + I Sbjct: 118 IIHYDSPDKRGIDVALLYQKKYFNPVFHEVFNPNMYRENKKVFTRDQLLVSGYLDNEFIH 177 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 ++ H S ++ + Q + + I K + ++ GDFN Sbjct: 178 LIVNHWPSRSGGEAKSRPLREKAA---YQNLKIIEKIRTKDDC-AKIILMGDFNDDPINS 233 Query: 219 G-----NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK----- 268 K + ND + N N D ++ Sbjct: 234 SFKKVLKTKRKKKNVGRNDLYNPYENMHRKGLNTLAYRDNLNLFDMILISSPFLDHGEKN 293 Query: 269 -----------------FLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + + SDH P+ I Sbjct: 294 FSSYKMYQAMIFNKRFLSDTKGKYKGYPFRSFSNGGYTGGYSDHYPVYI 342 >gi|255974862|ref|ZP_05425448.1| exonuclease III [Enterococcus faecalis T2] gi|255967734|gb|EET98356.1| exonuclease III [Enterococcus faecalis T2] Length = 257 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 36/306 (11%), Positives = 78/306 (25%), Gaps = 78/306 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ +SWN+N L + LDAD LQE A Sbjct: 6 TMKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQI 49 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + +++ +S A++VR Sbjct: 50 DLELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------EAHDQEG 95 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R ++ + + +++ + + + + ++ + + Sbjct: 96 R-----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK 143 Query: 203 VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N + + + + F Sbjct: 144 -PVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGI 202 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYFV+ ++ + L+ + SDHCP+ Sbjct: 203 YSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPV 251 Query: 299 SIDYDF 304 + DF Sbjct: 252 EVVLDF 257 >gi|238897851|ref|YP_002923530.1| exonuclease III [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465608|gb|ACQ67382.1| exonuclease III [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 268 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 82/309 (26%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L L + D ++ LQE ++ + Sbjct: 1 MKFVSFNINGLRAHP----------------HQLAAIIEKHDPHLIGLQETKVHDDM--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + H +A+ K+ + + +D+ R Sbjct: 42 -------FPLEEVRRHGYHVFYHGQKGHYGVALLTKDSPLAIRRGFPTDQEDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + ++ I V++ F + ++ + L ++TQ Sbjct: 90 RIIMADLKTPQGTITVIN-----GYFPQGESRLHPTKFPAKARFYEDLHRYLTQHFSVQS 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 +I GDFN L +++ + + F Sbjct: 145 HVLIMGDFNICPTDGDIGIGEQNRKRWLSSGKCAFLPEERAWFEHLQSWGLIDLFRVAYP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + I D ++ S Sbjct: 205 DYEHQYSWFDYRSKGFDENRGLRIDLLLASVPLARLAINSGI-------DYEIRGMEKPS 257 Query: 294 DHCPISIDY 302 DH P+ ++ Sbjct: 258 DHAPVWSEF 266 >gi|163753669|ref|ZP_02160792.1| hypothetical protein KAOT1_18642 [Kordia algicida OT-1] gi|161325883|gb|EDP97209.1| hypothetical protein KAOT1_18642 [Kordia algicida OT-1] Length = 320 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 42/320 (13%), Positives = 86/320 (26%), Gaps = 53/320 (16%) Query: 25 RLVSWNINTLSEQEGVSL-----------WKNSVKRTTSDYTLLRQYAKNLDAD------ 67 + +N+ L + E + KR L +L + Sbjct: 12 TIAFYNLENLFDTEDDKYVLDNDFLPESDRNWTPKRYDKKIYKLGSAISSLGPEDTKNAP 71 Query: 68 -IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +V + E+ + + + + N I + +K++ V+ Sbjct: 72 VLVGVAEVENKTVMQDLVDSKQLQEYNYDFVHYNSPDE---RGIDVGLLYQKEHFEVVHS 128 Query: 127 -SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 S P+L + +R R + + +N + I V H S + Sbjct: 129 ESIPILIYNEEGNRDFTRDTLYVKGLLNNEPIHVFVNHWSSRRDGAAET------AYKRI 182 Query: 186 QQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + A+ +++ I Q +E+ +I GDFN + D K Sbjct: 183 EAAKTVREKINYIQTEENDPHIIIMGDFNDDPTSESIQNYLM----DTDLYNPMEKLLTI 238 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQ-------------------ESFSEILYNEDD 284 + D + N + + + + Sbjct: 239 YKGSLNYRGEWNLFDQIIFTTNFFDYKKGTHSFASAAIFDEHFLTQWKGKYKGNPFRTYA 298 Query: 285 IKSRGKRLSDHCPISIDYDF 304 + SDH P+ I F Sbjct: 299 GRRYLGGYSDHFPVYIRLKF 318 >gi|229018928|ref|ZP_04175771.1| Exodeoxyribonuclease [Bacillus cereus AH1273] gi|229025172|ref|ZP_04181596.1| Exodeoxyribonuclease [Bacillus cereus AH1272] gi|228736105|gb|EEL86676.1| Exodeoxyribonuclease [Bacillus cereus AH1272] gi|228742371|gb|EEL92528.1| Exodeoxyribonuclease [Bacillus cereus AH1273] Length = 252 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 83/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + +Y + +ADI LQE+ + + Sbjct: 1 MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQSGQIDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ + + + ++ A+ K + + D R Sbjct: 47 NPEGYYTYW-----------NYAVKKGYSGTAIFTKKEPLSVTYGLGIDEHDQEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++ ++ + + + L + Sbjct: 92 -----VITLEFEDFHMITLYTPNSKRGLERLDYRMKWEDDFRAYIKRL--------DKKK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + I + + + A Sbjct: 139 PVIFCGDLNVSHKEIDLKNPKSNRKNPGFSDEEREKFTKILEEGFVDTYRFLYPEQEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV + + D + SDHCP+ Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVTSERLKHKI-----------TDAKINSEIMGSDHCPVE 247 Query: 300 IDYDF 304 + DF Sbjct: 248 LHMDF 252 >gi|116873216|ref|YP_849997.1| exodeoxyribonuclease III [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742094|emb|CAK21218.1| exodeoxyribonuclease III [Listeria welshimeri serovar 6b str. SLCC5334] Length = 251 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 83/304 (27%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L +Y + +DADI LQE Sbjct: 1 MKLISWNVNGLRAAVKKGF---------------LEYFEEVDADIFCLQETKLQEG-QIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + Q + D+ R Sbjct: 45 LDLKAYKDYWN----------YAVKKGYSGTAIFTKVEPLSVQYGLGIPEHDTEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + ++I + Sbjct: 91 -----VITLEFEAFFMVTVYTPN-------SQAELKRLDYRMTFEDAILEYIK-NLDKTK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + F +A Sbjct: 138 PVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + L+ + SDHCP+ Sbjct: 198 SWWSYRMNARARNTGWRIDYFVVSKRLKDKLVDAKIHSEVL-----------GSDHCPVE 246 Query: 300 IDYD 303 ++ + Sbjct: 247 LELN 250 >gi|90021640|ref|YP_527467.1| exonuclease III [Saccharophagus degradans 2-40] gi|89951240|gb|ABD81255.1| Exodeoxyribonuclease III [Saccharophagus degradans 2-40] Length = 272 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 31/286 (10%), Positives = 64/286 (22%), Gaps = 59/286 (20%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 L D + +QE + + + + Sbjct: 12 RIRLHQLEAVIAKHQPDFIGIQETKVSD----------PDFPVEAIQAMGYHVEFHGQKT 61 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 H +A+ K+ Q + ++S R + +GK+I V++ F Sbjct: 62 HYGVALMSKHPFNKVQKGYVTDTEESQK----RFILGEFTLPSGKQITVIN-----GYFP 112 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------- 217 + + L+ I + V+ GD N Sbjct: 113 QGENRDHPIKFPNKLKYYADLQAHIEASYKPSDLLVVMGDMNISHTDLDIGIGESNRKRW 172 Query: 218 ---------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----------PI 257 + K + + + I Sbjct: 173 LKDGKCSFLPEEREWLDKLLGWGLVDTYRQTNPNLEEEQYSWFDYRSKGFEREPKRGLRI 232 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + + + D ++ SDHCPI ++ Sbjct: 233 DLILASTALAQHSVASGI-------DYDIRGMEKASDHCPIWTEFS 271 >gi|52141752|ref|YP_085078.1| exodeoxyribonuclease III [Bacillus cereus E33L] gi|51975221|gb|AAU16771.1| exodeoxyribonuclease III [Bacillus cereus E33L] Length = 252 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 83/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + +Y + +ADI LQE+ + Sbjct: 1 MKFISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQEGQIDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + + + ++ A+ K + + D R Sbjct: 47 NVEDYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + + L + Sbjct: 92 -----VITLEFEGFYIITLYTPNAKRGLERLDYRMKWEDDFRAYIKRL--------DEKK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + I + + + A Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTCILEEGFIDTYRYLYPDQEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV+ + + + + SDHCP+ Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERIKNQIKDAKINSEV-----------MGSDHCPVE 247 Query: 300 IDYDF 304 + +F Sbjct: 248 LHINF 252 >gi|323526639|ref|YP_004228792.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1001] gi|323383641|gb|ADX55732.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1001] Length = 259 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 84/304 (27%), Gaps = 72/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 +++ +WN+N+L + + + D++ LQE+ Sbjct: 1 MKIATWNVNSL----------------KVRQQHVIDWLETSRTDVLCLQELKLPDEKFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +++ ++ N I VR+ + F Sbjct: 45 AELEEKGYRSWFAGQKTYN----------GVGILVREGLSVDEASVVRNIPG---FEDLQ 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + V+ + + + + Y + L DW+ + Sbjct: 92 QRVVAATV-----DGVRVISAYFPNGQAPGTDKFAYK------LRWLAALHDWVRSEMAL 140 Query: 202 LVPFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNA 247 + GD+N + +D + + + L+ ++ D Sbjct: 141 YPKLALLGDYNIAPDDRDVHDPKAWEGQNLVSPEERAEFVRLTELGLVDAFRQFDQPEKI 200 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ++ ID+ ++ + + D + + + SDH P+ Sbjct: 201 YSWWDYRMMAFRRNAGLRIDHILLSKPLAETCTSCEV-------DKVPRKWDQPSDHAPV 253 Query: 299 SIDY 302 Sbjct: 254 VAQI 257 >gi|163802095|ref|ZP_02195991.1| exodeoxyribonuclease III [Vibrio sp. AND4] gi|159174236|gb|EDP59044.1| exodeoxyribonuclease III [Vibrio sp. AND4] Length = 268 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 84/309 (27%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K V Q G R Sbjct: 42 -------FPIKDVEAMGYKVYFHGQKAHYGVAMLCKQEPVSVQK----GFPTDNEEHQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+K+ VL+ F + Q + L ++T + Sbjct: 91 MIMATFEDENGEKVTVLN-----GYFPQGDNIAHETKYPYKRQFYKDLMTYLTDYHSNDE 145 Query: 204 PFVIAGDFNRK---------------------INYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ ++ +T+ F Sbjct: 146 QLIVMGDINISSIDADIGIGEPNRKRWLKTGKCSFQPEEREWLQTLLSWGFEDTFRNLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + K I+ + D ++ S Sbjct: 206 EVDDRFSWFDYRSRGFDDNRGLRIDVILATPSLAKKCIES-------DIDYELRGIEKPS 258 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 259 DHAPIWSTF 267 >gi|111221323|ref|YP_712117.1| putative exodeoxyribonuclease III [Frankia alni ACN14a] gi|111148855|emb|CAJ60533.1| Putative exodeoxyribonuclease III [Frankia alni ACN14a] Length = 298 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 82/304 (26%), Gaps = 69/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +R+ +WNIN + L ++ D+V LQE S +A + Sbjct: 1 MRIATWNIN----------------SAKARQARLIEWLDRAGPDVVCLQETKLSDDAFLE 44 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 +F ++ + + + +A+ + L F Sbjct: 45 LFDEDLFR--------RGYRVAHHGDGRWNGVAILSRGSLDDVVRG--LPGGPGFPDPEP 94 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + V +++ + +D Y S L+D + + Sbjct: 95 RAIAATC-----DGVRVWSLYVPNGRTVDDPHYAYKLS------WLAALRDVVAAEVTRG 143 Query: 203 VPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P + GDFN + +D + + D Sbjct: 144 -PLMTLGDFNIAPTDADVWDVAQFEGATHVTPAERAALGELVDAGLVDVLRTRWPDDVVY 202 Query: 247 ANKNLR-------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + R + ID + + + D +G SDH P+ Sbjct: 203 TYWDYRQLCFPKNFGMRIDLTLASADVADRVRAVWV-------DRAARKGTGTSDHAPVI 255 Query: 300 IDYD 303 +D D Sbjct: 256 VDLD 259 >gi|304396123|ref|ZP_07378005.1| exodeoxyribonuclease III [Pantoea sp. aB] gi|304356492|gb|EFM20857.1| exodeoxyribonuclease III [Pantoea sp. aB] Length = 272 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 81/311 (26%), Gaps = 73/311 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L+ + D++ LQE ++ + Sbjct: 5 MKFVSFNINGL----------------RARPHQLQALVEQHQPDVIGLQETKVHDDM--- 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K V R Sbjct: 46 -------FPLEEVSKLGYHVFYHGQKGHYGVALLTKAQPVSVSR-----GFPDDDDESQR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + I V++ F + + + L+ +T + Sbjct: 94 RLIVAEIPSPIGDITVIN-----GYFPQGESRDHPTKFPAKEKFYRDLQRLLTDDLPADK 148 Query: 204 PFVIAGDFNRK---------------------INYLGNNDDFWKTIDPNDSLIRFPKEKD 242 P +I GD N ++L ++ + + + Sbjct: 149 PVLIMGDMNISSTDLDIGIGEDNRKRWLRTGKCSFLPEEREWMDRLLSWGLVDTWRVHNP 208 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID ++ +N ++ D ++ S Sbjct: 209 EVADRFSWFDYRSKGFDDNRGLRIDLVLVSKNLASHCVETGI-------DYAIRSMEKPS 261 Query: 294 DHCPISIDYDF 304 DH PI + F Sbjct: 262 DHAPIWSTFRF 272 >gi|295689833|ref|YP_003593526.1| endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] gi|295431736|gb|ADG10908.1| Endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] Length = 283 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 35/290 (12%), Positives = 72/290 (24%), Gaps = 36/290 (12%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + ++S+NI + ++ + + DI+ +QE Sbjct: 23 VQAQSPSFWVMSYNIRYDNPED--------RPDWRMRREPMARQISFFSPDILGVQEALV 74 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + + + + +A R P K + Sbjct: 75 PMVADLSAALPGYAHYGVGRDDGDKAGETTTIFYRSARFERLLAQTRWCSPTPERPGK-A 133 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + A R +++ + + + A+ L+D Sbjct: 134 YDAALPRTYARVVLRDRASGVLLDVRNAHLDHVG----------AESRRLCARQLRD--- 180 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-- 254 Q V+ GDFN +D D + Sbjct: 181 QPTWPGARLVVLGDFNSAPGE-PPHDVLTSGGDGLRDARAASPIVFGPAGTFNDFSPGAP 239 Query: 255 --IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 PIDY +D+ + + G +SDH PI + Sbjct: 240 PVGPIDYVFVDRAL---------QVLRFATLTDTEGGVAISDHFPIIVQI 280 >gi|260462207|ref|ZP_05810451.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum WSM2075] gi|259032067|gb|EEW33334.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum WSM2075] Length = 371 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 46/367 (12%), Positives = 103/367 (28%), Gaps = 86/367 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTT----------------SDYTLLRQ------- 59 +RL ++N+ L + S ++N + + Q Sbjct: 2 SLRLATFNVENLMNRFDFSGYRNQLNEDRTLALFDIQSEAEYKMLEQARAIAQSDDMRQL 61 Query: 60 ---YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 AD++ +QE+ + A+ + + R + + + I AI + Sbjct: 62 TALAIAATRADVICMQEVDNIEALKAFEYGYLFKMVGQGYRQKYTTSGNDSRGIDVAIMM 121 Query: 117 R--------------KKNVRVLQQSYPLLGAK------DSFSRAGNRRAVELLVEINGKK 156 R V + + L + + R R +E+ + + G Sbjct: 122 RNETAQGQPIEFVRMTSYAHVTYEQFGLYTPELAALGNQANERVFRRDCLEIDITVGGVP 181 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFN 212 + + +H KS + + + + +AQ ++ I Q+ + + I GD N Sbjct: 182 LTLYLVHFKSMGSPRNGLDGREATMPVRIAEAQAVRRIIEQRFGVDHAADKRWAICGDMN 241 Query: 213 RKINYLGNNDDFWKTID----------------PNDSLIRFPKEKDSRCNANKNLRNKI- 255 + D + S + + + R Sbjct: 242 DYRQRVKIAGDEFDGYRFEVVDEAQSCIDVLTAGGFSENIVERRPEMNRWTFYHTRGPEE 301 Query: 256 ----PIDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHC 296 +DY ++ + + + + + SDHC Sbjct: 302 RHLCQLDYILLSKGLAAKNATAVPDIIRNGQPWRTIFPAGQEVERFPRAGWDRPKASDHC 361 Query: 297 PISIDYD 303 P++I D Sbjct: 362 PVAITLD 368 >gi|134095562|ref|YP_001100637.1| putative exodeoxyribonuclease III [Herminiimonas arsenicoxydans] Length = 237 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 26/270 (9%), Positives = 75/270 (27%), Gaps = 56/270 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 ++Q+ + D++ LQE + + + + + + +A+ Sbjct: 1 MQQWLVDNPVDVLCLQETKTVDE----------KFPVAEIEAAGYQVAFTGQKTYNGVAI 50 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 ++ + +R + + + I ++ ++ + DS + Sbjct: 51 LSRHPITDVTKN------NPLLDDEQQRIIAGTI----QGIRIVCAYVPNGQSPDSDKYI 100 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND---DFWKTIDPND- 232 Y + L +W+ Q+++ + GD+N +D + + Sbjct: 101 YK------LNWLKALHEWLAQEQQQHPELALLGDYNIAPEDRDVHDPAAWAGQVLVSEPE 154 Query: 233 ----------SLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQE 273 + + + ID+ ++ Sbjct: 155 RAAFVRLQEMGFTDAFRMFEQPEKLYSWWDYRQMGFRLNRGLRIDHILLSAPLAARCSAC 214 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + + ++ SDH P+ D Sbjct: 215 VI-------DKVPRKWEQPSDHTPVIATID 237 >gi|119898073|ref|YP_933286.1| hypothetical protein azo1782 [Azoarcus sp. BH72] gi|119670486|emb|CAL94399.1| conserved hypothetical protein [Azoarcus sp. BH72] Length = 280 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 36/277 (12%), Positives = 82/277 (29%), Gaps = 52/277 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ S+N++ ++G D + + L DIV LQE+ + + Sbjct: 23 LRISSYNVHRCVGRDG-----------RMDVARVARVIDELGCDIVGLQEVDNLANGSHE 71 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + I N++ A+ + + + + L S+ R R Sbjct: 72 SMQLDFLASATGMEAIA-GHTIVNHEGSFGNALLTRRPVLAVRRHDL-----SYHRREPR 125 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A+++ +E+ + + V+ HL + Q + + + Sbjct: 126 GAIDVDLEVKDEVVRVIVTHLGLRP-------------AERRFQVRQMLKLL-HDIPPER 171 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 V+ GD N + + + + + +D + Sbjct: 172 NVVVLGDINEWLPLGRPLRWLHGLL-----------GRAPAERSFPSGLPLFALDRVWVR 220 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +L E + SDH P+ Sbjct: 221 PR----------HTLLAFETHRSPTARIASDHLPVKA 247 >gi|312198907|ref|YP_004018968.1| exodeoxyribonuclease III Xth [Frankia sp. EuI1c] gi|311230243|gb|ADP83098.1| exodeoxyribonuclease III Xth [Frankia sp. EuI1c] Length = 305 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 77/305 (25%), Gaps = 71/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +R+ +WNIN + L ++ D+V LQE A A+ Sbjct: 1 MRIATWNIN----------------SAKARQARLIEWLDRAQPDVVCLQETKLDDEAFAE 44 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 F ++ + + + +A+ + F Sbjct: 45 NFDEDLFR--------RGYRYAHHGDGRWNGVALLSRAGLDDVARG--FAGDPGFPEPEP 94 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R I V +++ + D Y + L+D + + Sbjct: 95 RAIAATC-----GGIRVWSLYVPNGRTPDDPHYAYK------LRWLAALRDTVAEVAAH- 142 Query: 203 VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P + GDFN + + + + + Sbjct: 143 QPVMALGDFNIAPTDADVWDPADFVGATHVTEPERAALRELTGVGLIDVL-RARWPDETV 201 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + ID + + K + D +G SDH P+ Sbjct: 202 YTYWDYRALCFPKNMGMRIDLTLAGADVAKRVAAVYV-------DRAARKGTGTSDHAPV 254 Query: 299 SIDYD 303 +D D Sbjct: 255 IVDLD 259 >gi|87198182|ref|YP_495439.1| exodeoxyribonuclease III [Novosphingobium aromaticivorans DSM 12444] gi|87133863|gb|ABD24605.1| Exodeoxyribonuclease III [Novosphingobium aromaticivorans DSM 12444] Length = 259 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 81/304 (26%), Gaps = 72/304 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++ S+NIN + L ++ + + LQE+ + + Sbjct: 2 TLKVASFNING----------------IKARLPRLLEWLEETRPSVACLQEIKTQDE--- 42 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV-RVLQQSYPLLGAKDSFSRAG 141 I + +A+ V Q +D SR Sbjct: 43 -------GFPAEEFEKIGYRAIWHGQKGFNGVAILADGEQPVEVQRGLAGDPEDEHSRY- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E + + V+ I+L + + Y + + L+ + Sbjct: 95 --------LEADVFGLRVVCIYLPNGNPQPGPKFDYK------LRWMERLRARMADIASE 140 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 VP ++ GD+N + D + + ++ + Sbjct: 141 EVPALVIGDYNVIPEDKDTFSVKAMASDALMQPESRDAYRRLLNDGWTDAIDLFNPQGGV 200 Query: 246 NANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + ID+ ++ L+ D ++ SDH P+ Sbjct: 201 WTFWDYQAGAWQRDHGFRIDHALLSPELADRLVAAGV-------DKDYRGREKASDHAPV 253 Query: 299 SIDY 302 + Sbjct: 254 WVTL 257 >gi|282864842|ref|ZP_06273896.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE] gi|282560267|gb|EFB65815.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE] Length = 796 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 36/327 (11%), Positives = 75/327 (22%), Gaps = 69/327 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ--YAKNLDADIVFLQEMGSYNA 79 ++ + ++N+ L + + + L D+V L+E+ N Sbjct: 492 DELAVATYNVENLDALDD-----------QAKFDTLASGVAVNLSSPDVVSLEEIQDDNG 540 Query: 80 V-----------------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 A V + N + +I V Sbjct: 541 AVNDGTVGSEATLKRFTDAIVAAGGPRYSWRYVAPENNKDGGEPGGNIRNVFLFNPGRVS 600 Query: 123 VLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 + ++ P S + +R+ + G+ ++V+ Sbjct: 601 FVDRAGGDATTAVEAVKTRKGATLSVSPGRINPTSTAWDSSRKPLVGEFRFRGEPVFVIG 660 Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKI 215 H S L Y S + +QA + ++T ++ V GD N Sbjct: 661 NHFASKGGDQPLHGRYQEPERGSETQRVRQAAEVNTFVTSLLKADRSARVVTLGDLNDFA 720 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + N +D+ + Sbjct: 721 FSP----AMDALTRGRVLKPLITTLPRGEQYSYVYDGNSQTLDHILTSPGIR-------- 768 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P + Sbjct: 769 RLDYDVVHINAEFADQASDHDPQIVRI 795 >gi|229157316|ref|ZP_04285394.1| Exodeoxyribonuclease [Bacillus cereus ATCC 4342] gi|228626043|gb|EEK82792.1| Exodeoxyribonuclease [Bacillus cereus ATCC 4342] Length = 252 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 86/305 (28%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + +Y + +ADI LQE+ + + Sbjct: 1 MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQDGQIDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + ++ A+ K + + D R Sbjct: 47 NLEEYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + + L + Sbjct: 92 -----VITLEFEDFYIITLYTPNSKRGLERLDYRMKWEDDFRVYIKRL--------DEKK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V GD N + + + I + + ++ A Sbjct: 139 PVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTCILEEGFIDTYRYLYPNQEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV+ + + + + + SDHCP+ Sbjct: 199 SWWSYRMGARVKNIGWRLDYFVVSERMKDQITEAKINSEV-----------MGSDHCPVE 247 Query: 300 IDYDF 304 + +F Sbjct: 248 LHINF 252 >gi|297203458|ref|ZP_06920855.1| exodeoxyribonuclease III [Streptomyces sviceus ATCC 29083] gi|197716336|gb|EDY60370.1| exodeoxyribonuclease III [Streptomyces sviceus ATCC 29083] Length = 259 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 78/304 (25%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N T+ L + ++ D++ LQE A Sbjct: 1 MRIATWNVN----------------SITARLPRLLAWLESTGTDVLCLQEAKVAEA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + R + +AV + L G R Sbjct: 41 ------QFPFDQLREAGYEAAVHATGRWNGVAVISRVGLDDVVKG-LPGDPGYDGAPEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + V +++ + +D Y Q + LK + Sbjct: 94 A-----ISATCGPARVWSVYVPNGREVDHPHYAYK------LQWFEALKAAVAGDAAGSR 142 Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF + GD+N D ++ P+ + Sbjct: 143 PFAVLGDYNVAPTDDDVYDVAAFEGLTHVTPAERAALASLREAGLSDVVPRPLKYD-HPF 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID +++ K D + +GK SDH P+ Sbjct: 202 TYWDYRQLCFPKNRGMRIDLVYGNESFAKA-------VTDAYVDREERKGKGASDHAPVV 254 Query: 300 IDYD 303 +D D Sbjct: 255 VDLD 258 >gi|167586711|ref|ZP_02379099.1| Exodeoxyribonuclease III xth [Burkholderia ubonensis Bu] Length = 258 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 29/300 (9%), Positives = 77/300 (25%), Gaps = 68/300 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + D++ LQE Sbjct: 1 MKIATWNVNSLN----------------VRKQHVLDWLAQSGTDVLCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ + L + + Sbjct: 35 LKLPDDKFPRADLEAAGYRSWFTGQKTYNGVAILAR--DTLPFDESDVTRNVPGFDDPQQ 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + ++ ++ + + DS + Y Q L W+ + + Sbjct: 93 RVIAVTIDGT----RIISAYFPNGQAPDSDKFVYK------MQWLDALNAWLRSELQRYP 142 Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249 + GD+N +D + P + + + Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAGLLELGLVDAFRRFEQPEKTFT 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ + D ++ SDH P+ Sbjct: 203 WWDYRMMAFRRNAGLRIDHILLSPALAETCTSC-------VVDRTPRTWEQPSDHTPVVA 255 >gi|237799461|ref|ZP_04587922.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022317|gb|EGI02374.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 261 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 40/298 (13%), Positives = 88/298 (29%), Gaps = 51/298 (17%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 F S + + +++ N++ LR+ +++ ADIVFL Sbjct: 8 FGPATPVSASVSLNVLTMNMHMGFGIFNRRF----------ILPELREAVRSVSADIVFL 57 Query: 72 QEMGSYNAVA----KVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQ 125 QE+ K +P + F + + + + D A+ K + Sbjct: 58 QEVHGEQQSHARSVKGWPTISQYEFLADAMWSDFAYGRNAVYPDGDHGNALLSKYPIIQH 117 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 ++ + R + ++++ V + + F S Sbjct: 118 ENLDISIDG-----TEQRGLLHCILDVPNHG-HVHAVCVHLGLF-----------ESHRR 160 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 QQ + L + + + P ++AGDFN + F + + Sbjct: 161 QQLKLLAELMAR-LPEGEPVIVAGDFNDWRQRAD------ALLHGTGLHEVFVERFGAPA 213 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +D + S + LSDH P++++ Sbjct: 214 KSFPARWPLLRLDRIYVRNA-----TSHSPKVLS------SRPWSHLSDHAPLAVELT 260 >gi|229197850|ref|ZP_04324566.1| Exodeoxyribonuclease [Bacillus cereus m1293] gi|228585568|gb|EEK43670.1| Exodeoxyribonuclease [Bacillus cereus m1293] Length = 252 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 82/305 (26%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + +Y + +ADI LQE+ + Sbjct: 1 MKFISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQEGQIDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + ++ A+ K + + D R Sbjct: 47 NVEGYYTYW-----------NYAVKKGYSGTAIFSKEEPLSVTYGLGIEEHDQEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + + L + Sbjct: 92 -----VITLEFEDFYIITLYTPNSKRGLERLDYRMKWEDDFRVYIKRL--------DEKK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + I + + + A Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTCILEEGFIDTYRYLYPDQEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV+ + + + + SDHCP+ Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDQITAAKINSEV-----------MGSDHCPVE 247 Query: 300 IDYDF 304 + +F Sbjct: 248 LHINF 252 >gi|90409139|ref|ZP_01217258.1| hypothetical protein PCNPT3_10586 [Psychromonas sp. CNPT3] gi|90309747|gb|EAS37913.1| hypothetical protein PCNPT3_10586 [Psychromonas sp. CNPT3] Length = 347 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 42/338 (12%), Positives = 96/338 (28%), Gaps = 54/338 (15%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +++ ++N+ ++ S + + Y D++ QE+ Sbjct: 7 TTPTTPIKICTFNLFNYAQPPYAYYDFESIYSDVQWAKKQAWICAYLARFKPDVIAFQEV 66 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL---QQSYPLL 131 S +++ K+ + + ++S S D AIA R L Sbjct: 67 FSIDSLQKLLKEAGY-AYFSVVDAPTLSDGFIYRDPVLAIASRYPIKETYALGVDPTLLA 125 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSL------- 183 S + +R+ + +E+ + +HLKS L Sbjct: 126 PLGLSADFSFSRKVLRASIELPHIGLCDFYVVHLKSKRSLFEYYPDAKERIEKTILGRLK 185 Query: 184 ------------LSQQAQWLK-DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 +A L + ++++ +P V+ GDFN + + + Sbjct: 186 AQLSGGWGSTVQRGSEALLLHMAILERREKLGLPVVLLGDFNNNLEDGVLSQLLKHELRF 245 Query: 231 NDSLI--------------------RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 +E + + + +D+ ++ Sbjct: 246 VTGAQDKQYLDKYCLKNAWDLYQKADPERESQPCPGTHYFAQQWVTLDHILLSSEFDTSA 305 Query: 271 IQESFSEILYNEDD------IKSRGKRLSDHCPISIDY 302 Q FS ++ I ++ SDH + I Sbjct: 306 SQCFFSVSAHHTHVQHLVCPIFEYDQQSSDHGVVMITL 343 >gi|119776077|ref|YP_928817.1| extracellular nuclease [Shewanella amazonensis SB2B] gi|119768577|gb|ABM01148.1| extracellular nuclease [Shewanella amazonensis SB2B] Length = 865 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 44/378 (11%), Positives = 100/378 (26%), Gaps = 88/378 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQ----EGVSLWKNSVKRTTS----DYTLLRQYAKNLDA 66 + +R+ S+N+ + N T T + ++A Sbjct: 455 APVVAEKGDIRVASFNVLNFFNDVVGGDANPTGSNRGALTEEEMLLQRTKIVNAITAMNA 514 Query: 67 DIVFLQEMGSY-----NAVAKVFP--------KNTWCIFYSTERLINHSKRDSNNDIHTA 113 DIV L E+ + +A+ + N + E K N+ I Sbjct: 515 DIVGLMEIANNGFGEKSAIQNLLDALNAEQSADNAYSFVEIAEADKTDGKYFGNDAITVG 574 Query: 114 IAVRKKNVR------------------VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155 + R V V + R ++ ++ + Sbjct: 575 MLYRAAKVSPEGTAFVIETPEQHAPEGVASRDNKGTVETSPAQDKYQRHSLGQTFKVKDE 634 Query: 156 KIWVLDIHLKS---FCFLDSLENTYSPS--------CSLLSQQAQWLKDWITQKKES--- 201 + V+ HLKS C D + S + A+ + + + + Sbjct: 635 NLTVVVNHLKSKGSGCLEDWINFDESRDPADLQGKCNAFRVSAAKVIGEAVKDIEGDVLV 694 Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTI-------------DPNDSLIRFPK 239 P + D++ + + T+ + + Sbjct: 695 IGDLNAYGMEDPVRVLTDYDATTSNRKVKTASYTTLAGQSYEQQGSVIEKGYGLINLNTQ 754 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291 + + +D+ + +++ K ++ I E ++ GK+ Sbjct: 755 VHGADTYSYSYNGELGNLDHALGNESLAKRVVDIEDWHINSVESNLFEYGKKFTGSLEKS 814 Query: 292 -----LSDHCPISIDYDF 304 SDH P+ + + Sbjct: 815 ENAFSASDHDPVIVALSY 832 >gi|328873522|gb|EGG21889.1| hypothetical protein DFA_01775 [Dictyostelium fasciculatum] Length = 296 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 86/308 (27%), Gaps = 51/308 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 Q +R++S+NI S ++G++ W N L+ K I+ QE Sbjct: 11 QTLRIMSFNIRYDSHKDGINNWVN-------RRNLVVDTIKQTKPTIIGFQECLKNQIEE 63 Query: 82 KVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + S + + + S+ Sbjct: 64 IINDLGGDYSFVGVGRDDGLSKGEYSPIAYNNKLVRYDHGSHFWISQDCYVAGSKSWDTM 123 Query: 141 GNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R A + + K + L+ HL L + L Sbjct: 124 CPRIATWGKFKYHNNSKKSFYTLNTHLDHMSS-------------LARSEGTLLIKSFVS 170 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKT---------------------IDPNDSLIR 236 + +P +I GDFN ++ + K + + Sbjct: 171 HLDPSIPCIITGDFNEEVGSKPYRNIIDKMDDMVGHKYMNMLKIPIAPTYSLKTFKDCSK 230 Query: 237 FPKEKDSRCNANK--NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 +D + K+ IDY ++ + + ++L I++ G + SD Sbjct: 231 AANNRDGPFHTFTGFTDEYKVTIDYIFVNAS----VKSVDKFQVLTGHLKIETDGLKPSD 286 Query: 295 HCPISIDY 302 H PI D Sbjct: 287 HLPIYADL 294 >gi|149278560|ref|ZP_01884696.1| exodeoxyribonuclease III (exonuclease III) [Pedobacter sp. BAL39] gi|149230555|gb|EDM35938.1| exodeoxyribonuclease III (exonuclease III) [Pedobacter sp. BAL39] Length = 260 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 32/303 (10%), Positives = 78/303 (25%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN ++ +L ++ D+V LQE+ + Sbjct: 1 MKIATYNINGVNG----------------RLPVLLRWLAKAQPDVVCLQELKCES----- 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ K+ ++ +R Sbjct: 40 -----YRFPVTAINDAGYQAIWRGEKSWNGVAILSKSEIRELRTDLPGEDASYQH---SR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + I+L + + Y + L D + + Sbjct: 92 YIEGFTF-----GMVIGCIYLPNGNPYPGPKFDYK------LRWFSRLADHGRTLLNTGL 140 Query: 204 PFVIAGDFNRKINYLGNND-------DFWKTIDPNDSLIRFP-------KEKDSRCNANK 249 P ++ GD+N L ++ +E Sbjct: 141 PVMLVGDYNVMPTELDTYKPEKYLDNALFREESRKAYADLVAQGWIDAIRELYPGERIYT 200 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +D+F+++ L + D ++ SDH P+ I Sbjct: 201 FWDYMRNAYGRNAGLRLDHFLLNPVLAGRLK-------VAKVDKEVRGWEKASDHAPVWI 253 Query: 301 DYD 303 + Sbjct: 254 ELS 256 >gi|296393768|ref|YP_003658652.1| exodeoxyribonuclease III Xth [Segniliparus rotundus DSM 44985] gi|296180915|gb|ADG97821.1| exodeoxyribonuclease III Xth [Segniliparus rotundus DSM 44985] Length = 267 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 35/307 (11%), Positives = 72/307 (23%), Gaps = 68/307 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WNIN + + + D++ LQE NA Sbjct: 1 MRIATWNIN----------------SIRARADRAVAWLERSQVDVLALQETKCANA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + R ++ + N +A+ + + Sbjct: 41 ------QFPEAPFREAGYAVAHTGNGQWNGVAIVSRLGLGDVRIGFDGQPGFHKDPEAPA 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KES 201 + + + +++ + L Y LKD + Sbjct: 95 EPEPRAIAATCGGVRIWSLYVPNGRDLADRHYRYKLD------WLAALKDQAEGWLAADP 148 Query: 202 LVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 +AGD+N F+ + Sbjct: 149 EAKIALAGDWNIAPFDEDVWDPSLFEGKTHTSAPERAAFFAF--EQAGFTDVARPHTPGP 206 Query: 246 NANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 ID+ + + + S D + +GK SDH Sbjct: 207 GLYTYWDYTQLRFPRREGMRIDFVLGSPALARAVQGASV-------DREERKGKGASDHA 259 Query: 297 PISIDYD 303 P+ +D + Sbjct: 260 PVVVDLE 266 >gi|116251598|ref|YP_767436.1| exodeoxyribonuclease [Rhizobium leguminosarum bv. viciae 3841] gi|115256246|emb|CAK07327.1| putative exodeoxyribonuclease [Rhizobium leguminosarum bv. viciae 3841] Length = 264 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 82/303 (27%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N ++ +L ++ K D+V LQE+ + +A Sbjct: 1 MKIATYNVNGING----------------RLDILSRWLKEDTPDVVCLQELKTDDA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +A+ K + L G D Sbjct: 41 ------RFPRKEIERAGYGAIWHGQRSWNGVAILAKGKIPILTRRGLPGDPDDTHSRYIE 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 AV I V ++L + + Y + + L ++ + E V Sbjct: 95 GAV--------DGILVGCLYLPNGNPFPGAKFDYK------LRWFRRLHEYAAELLELEV 140 Query: 204 PFVIAGDFNRKINY---LGNNDDFWKTIDPND-----------SLIRFPKEKDSRCNANK 249 P ++AGDFN + + + Sbjct: 141 PSILAGDFNVMPTEIDVYKPERWLDDALFRPEVRRAYADLVAQGWTDAVRHLHPEERIYT 200 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+F++ +L + + SDH P+ I Sbjct: 201 FWKYWRNSFERDAGLRIDHFLLSPAVAPWLRSATVR-------KKPRGWEHTSDHAPVMI 253 Query: 301 DYD 303 + D Sbjct: 254 ELD 256 >gi|332703871|ref|ZP_08423959.1| exodeoxyribonuclease III [Desulfovibrio africanus str. Walvis Bay] gi|332554020|gb|EGJ51064.1| exodeoxyribonuclease III [Desulfovibrio africanus str. Walvis Bay] Length = 254 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 80/305 (26%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N G + + + AD+V LQE K+ Sbjct: 1 MKLLSWNVNGFRAVAGKNF---------------LDWLRASAADVVCLQE-------TKL 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 +P+ + + ++ +A + G D+ R R Sbjct: 39 WPEQITEQELHPDGYTGVWNSHATRKGYSGVASLFTRKPLSTS----FGLPDARFRGEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++ ++ +++ + A L+ Sbjct: 95 L-----ICLEYERFYLCNVYFPNGQKGGERLRFKLGYYDAFLDYALELRKH--------K 141 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P V+ GDFN + + + + + Sbjct: 142 PVVVCGDFNTAHKEIDLAHPAANAHTSGFLPEERQWLDRFV--AAGFVDTFRLFEPGGGH 199 Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 IDYF + + + + G SDHCP+ Sbjct: 200 YTWWSYFTKARERNVGWRIDYFFVSEELRGAVKRAWIE-----------PGVPGSDHCPV 248 Query: 299 SIDYD 303 ++ D Sbjct: 249 GLELD 253 >gi|269124631|ref|YP_003298001.1| endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM 43183] gi|268309589|gb|ACY95963.1| Endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM 43183] Length = 268 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 88/287 (30%), Gaps = 31/287 (10%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + V + S+N L Y + + ++ D D+V QE+ ++ Sbjct: 5 AGRGVTVASFNTRGLPLFGSNLA---------ERYRAIAAFFESSDIDVVNFQEVFTHRH 55 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + + R + + + R + + +PLL + R Sbjct: 56 LRLLSAGMP------SFRHLAYRRALVGPAGGLVTLSRLPTGKSGYRRFPLLPSSPGLPR 109 Query: 140 A-GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + A++ + + V I+ D + + L Q L + + Sbjct: 110 TVRFKAALKGALITPLRDQGVCVINTHPVANGDGDWSDANRFRPLQQGQLTALARLVQEI 169 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-- 256 ++ P V+ GDFN + + D L+ + L+ Sbjct: 170 ED---PVVVCGDFNVARDSTLHRDFLAT-----TGLVDAFAGSCPPTFHSAYLKPGQRPH 221 Query: 257 -IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ ++ ++ F++ + + LSDH + Sbjct: 222 CIDFILVAKSIGVESTGTLFTDR----EPLAGGPSYLSDHIGLYARL 264 >gi|49474410|ref|YP_032452.1| exodeoxyribonuclease III [Bartonella quintana str. Toulouse] gi|49239914|emb|CAF26312.1| Exodeoxyribonuclease III [Bartonella quintana str. Toulouse] Length = 260 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 87/303 (28%), Gaps = 66/303 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNI + + L Q+ + DIV LQE+ S + Sbjct: 1 MKIATWNIAG----------------IKARHETLYQWLQQNQPDIVCLQEIKSTDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ K D +R Sbjct: 41 ------NFPCDAIESLGYHIETHGQKSFNGVAILSKKTPDEVIRRLPGNNNDEQTRY--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + N I V ++L + + S + +Y + + L Sbjct: 92 --IEAVYSTNKGVIRVASLYLPNGNPVKSEKYSYK------MEWMERLYAHAKSLLAYEE 143 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGD+N +L + ++ I D+ + Sbjct: 144 PLVLAGDYNVIPTPLDAKNPQKWSNDALFLPQTRNAFQRIVHLGFYDAIRNVTDTPSFSF 203 Query: 249 KNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + N I ID+ ++ A L I + SDH P+ ID Sbjct: 204 WDFQAGAWHKNNGIRIDHLLLSPEAVDQL-------ICAYSQTEVRGYPKSSDHAPVWID 256 Query: 302 YDF 304 +F Sbjct: 257 LNF 259 >gi|229061336|ref|ZP_04198683.1| Exodeoxyribonuclease [Bacillus cereus AH603] gi|228717951|gb|EEL69596.1| Exodeoxyribonuclease [Bacillus cereus AH603] Length = 252 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 85/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + +Y + +ADI LQE+ + + Sbjct: 1 MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQSGQIDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ + + + ++ A+ K + + D R Sbjct: 47 NPEGYYTYW-----------NYAVKKGYSGTAIFTKKEPISVTYGLGIEEHDQEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + + + L + Sbjct: 92 -----VITLEFDDFYMITLYTPNSKRGLERLDYRMEWEDDFRAYIKRL--------DEKK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + + + + + A Sbjct: 139 PVIFCGDLNVAHKEVDLKNPKSNRKNPGFSDEEREKFTCVLEAGFIDTYRYLYPDQEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV+ + +I + + SDHCP+ Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVISERLEHKIIDAKINSEV-----------MGSDHCPVE 247 Query: 300 IDYDF 304 + DF Sbjct: 248 LHIDF 252 >gi|213966791|ref|ZP_03394942.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato T1] gi|213928641|gb|EEB62185.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato T1] Length = 365 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 45/343 (13%), Positives = 103/343 (30%), Gaps = 75/343 (21%) Query: 11 FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53 C+ +V Q +++++WNI L+ + + + + Sbjct: 35 LLTASCSTAVQAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTPEDLAYN 94 Query: 54 YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99 + + ++ DIV LQ + +A ++P +T ++ E + Sbjct: 95 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYQDQQKLLQERLADLYPCSTQAFYWKAEFVP 154 Query: 100 -NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKK 156 H + T + LQ P+ A + + A+ + +G K Sbjct: 155 SPHIWGSVGRKLTTLSRFHIDSAERLQLPVPVPDANIISRQFQPKNALLVSYLPLRDGGK 214 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI- 215 + V++ HL + D +Q ++ + + + P++I GDFN Sbjct: 215 LAVINTHLATAKPGDG----------TAHEQIAATENLLDKLEGGGTPWLIGGDFNLLPL 264 Query: 216 -----------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-KNLRNKIPI------ 257 + + + + + + + + + N I Sbjct: 265 GQYQRLPEQQRHGYAADSELHALWEKYPMIPNNTESSGTDRSQWLTHFPNDSRINGPDRT 324 Query: 258 -DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 DY + + S + +SDH P+ Sbjct: 325 VDYLFYSPSLKR----VSARVRRDDTLL-------ISDHLPVI 356 >gi|83718560|ref|YP_442749.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia thailandensis E264] gi|257138960|ref|ZP_05587222.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia thailandensis E264] gi|83652385|gb|ABC36448.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia thailandensis E264] Length = 286 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 85/308 (27%), Gaps = 52/308 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 +RL+SWNI + G T D A+ L D D++ +QE+ Sbjct: 1 MRLISWNIQWGRDANG-----------TVDLARTIDAARGLGDFDVLCMQEVTRGFHALP 49 Query: 75 --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 S + A++ + + A+ + + L Sbjct: 50 GGPSGDQYAELAALLPGYAVFDAIGVDLPPLGPGAPRRQFGNALATRLPVERAMRHALPW 109 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + + + R A+E+ + + V+ HL+ + + L ++A Sbjct: 110 PASAAAPSMPRCALEVTLRAPFGPLRVIVTHLEYYSA--QQRLAQVDALRRLHREAAAHA 167 Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF------ 237 + PF ++ GDFN D + + Sbjct: 168 RASAPPETPTGPFAPSARAADAIVCGDFNSAYRSEAYRRFLAPFPDAPRFVDAWLARHPG 227 Query: 238 --PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 P + + + D+ + + + R SDH Sbjct: 228 KTPPMTAGVYDTGQWSEGPMTCDFAFVTDTLAHRISRCEI-----------DGATRASDH 276 Query: 296 CPISIDYD 303 PI ++ Sbjct: 277 QPIVLELS 284 >gi|269123835|ref|YP_003306412.1| Endonuclease/exonuclease/phosphatase [Streptobacillus moniliformis DSM 12112] gi|268315161|gb|ACZ01535.1| Endonuclease/exonuclease/phosphatase [Streptobacillus moniliformis DSM 12112] Length = 597 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 104/324 (32%), Gaps = 63/324 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY------ 77 + + S+N+ + S +RT ++ DI+ L E+G Sbjct: 289 INIASYNVENYAHV-------VSPERTVQFAKQVKDKLNT--PDIITLIEVGDDDGPTTS 339 Query: 78 ---------NAVAKVFPK--NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 A+ N + + + + +I AI RK V++++ Sbjct: 340 DVVSSEKNGQALIDAIRDETNIEYGYLAVDPEYGKDGGMPSMNIRNAILYRKDRVKLIES 399 Query: 127 S----------------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164 + P DS R+ + L ++NGK ++++ +HL Sbjct: 400 NKSTSYDNTKVILDNNGKAKLKYNPGRIGLDSEYFVATRKPLVALFDVNGKHLYIIGVHL 459 Query: 165 KSFCFLDSLENTY----SPSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKINYL 218 S D + S ++QA ++ +++ + K+ V+ GD N Sbjct: 460 SSKRGDDPIYGPQQPPIRRSEVNRNKQATYINNFVKEILSKDKDASIVVMGDINDYDFST 519 Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 + + I N+ + + ++ + +D +++ + + Sbjct: 520 TSKN-----IRGNELIDVMGELAPNKRYSYVYGGMSQVLDNMFINKEYSGKVNVDVIRIN 574 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P+ I + Sbjct: 575 P----EFTKAQGAFSDHDPVFIQF 594 >gi|218530329|ref|YP_002421145.1| 5'-nucleotidase domain protein [Methylobacterium chloromethanicum CM4] gi|218522632|gb|ACK83217.1| 5'-Nucleotidase domain protein [Methylobacterium chloromethanicum CM4] Length = 2796 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 42/350 (12%), Positives = 87/350 (24%), Gaps = 72/350 (20%) Query: 19 SVAQKVRLVSWNINTLSEQ-----------EGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 V +++ S N+ NS + L AD Sbjct: 1281 PVGGTLKVGSLNVLNYFTTLDTGSAARTAIGQQPRGANSPEELARQTEKLVTTLIGTGAD 1340 Query: 68 IVFLQEMGSY-------NAVAKVFPKNTWCIFYSTERLINHSKRD------SNNDIHTAI 114 ++ L E+ + NA+ + + T IN + + I Sbjct: 1341 VLGLTEIENQFRPGDPGNALEYLVGQLNLRAGAGTYASINPGAQLDQGQFLGGDAIAVGF 1400 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN------------------RRAVELLVE--ING 154 + V V + + R A+ + G Sbjct: 1401 IYKPSKVSVAMNTTIERLDDTDVAAFNPALLQQSTLGHLFNGANTSRAALAVTFNEIATG 1460 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVP--FVI 207 + + H KS + + QQ A L W++ + ++ Sbjct: 1461 EDFTAIINHFKSKGGTGTGADADQGDGQGAWQQQRELAATALAQWVSMRPTGTQDSDTLL 1520 Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 GDFN + + I +++ + + +D+ + + Sbjct: 1521 LGDFNAYLKEDALD------ILRAAGFTNLAEDRLANPYSYVFDGAYGALDHALASASLN 1574 Query: 268 KFLIQESFSEILYNEDDIKSRGKRL---------------SDHCPISIDY 302 + + + I +E D SDH P+ + Sbjct: 1575 RQVTGVTEWHINADEADAIDYNLDFGRSPRSFDGRSPARESDHDPVLVGL 1624 >gi|254561286|ref|YP_003068381.1| hypothetical protein METDI2865 [Methylobacterium extorquens DM4] gi|254268564|emb|CAX24521.1| hypothetical protein, putative 5'-nucleotidase domain [Methylobacterium extorquens DM4] Length = 2796 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 40/350 (11%), Positives = 87/350 (24%), Gaps = 72/350 (20%) Query: 19 SVAQKVRLVSWNINTLSEQEG-----------VSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 V +++ + N+ NS + L AD Sbjct: 1281 PVGGTLKVGTLNVLNYFTTLDTGSAARTAIGLEPRGANSPEELARQTEKLVTTLIGTGAD 1340 Query: 68 IVFLQEMGSY-------NAVAKVFPKNTWCIFYSTERLINHSKRD------SNNDIHTAI 114 ++ L E+ + NA+ + + T +N + + I Sbjct: 1341 VLGLTEIENQFRPGDPGNALEYLVGQLNLRAGAGTYASVNPGAQLDQGQFLGGDAIAVGF 1400 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN------------------RRAVELLVE--ING 154 + V V + + R A+ + G Sbjct: 1401 IYKPSKVSVAMNTTIERLDDTDVAAFNPALLERSTIGHLFNGANTSRAALAVTFNEIATG 1460 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVP--FVI 207 + + H KS + + QQ A L W++ + ++ Sbjct: 1461 EDFTAIINHFKSKGGTGTGADADQGDGQGAWQQQRELAATALAQWVSMRPTGTQDSDTLL 1520 Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 GDFN + + I +++ + + +D+ + + Sbjct: 1521 LGDFNAYLKEDALD------ILKAAGFTNLAEDRLANPYSYVFDGAYGALDHALASASLN 1574 Query: 268 KFLIQESFSEILYNEDDIKSRGKRL---------------SDHCPISIDY 302 + + + I +E D SDH P+ + Sbjct: 1575 RQVTGVTEWHINADEADAIDYNLDFGRSPSSFDGRSPARESDHDPVLVGL 1624 >gi|308176289|ref|YP_003915695.1| extracellular nuclease [Arthrobacter arilaitensis Re117] gi|307743752|emb|CBT74724.1| putative extracellular nuclease [Arthrobacter arilaitensis Re117] Length = 638 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 48/338 (14%), Positives = 92/338 (27%), Gaps = 64/338 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWK-----------------------NSVKRTTSDYTLL 57 V + S+N+ G L + + + + Sbjct: 303 GGNVSVGSFNVLNYFTTTGDMLDGCSYYTDREGNPINVRGGCDARGAATAESFERQQSKI 362 Query: 58 RQYAKNLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 AD+V L+E+ + A+A + + + ++ Sbjct: 363 VSALGEFTADVVVLEEIENSARFGQNRDAALANLVNELNEEAGDEVWSYVPTPSVVPADE 422 Query: 110 --IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 I TAI R K V+ + +S L S +R +A + + + V+ H KS Sbjct: 423 DVIRTAIIYRDKAVKPIDESVILDDPAFSNARDPLAQAFQRVGGNQNTRFLVVANHFKSK 482 Query: 168 C--FLDSLENTYSPSCS-----LLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYL 218 D N QA+ L + + K+ + ++AGDFN Sbjct: 483 GSNPDDGSGNADKGDGQGAWNVARVAQAEALVGFADELKKLRNTDQVLLAGDFNSYAAED 542 Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 + + + + + +D+ + + E I Sbjct: 543 P-----MQVLIEAGYVDL---GAAADSQSYLYDGFVGSLDHIFASEKLAGKVTGEDIWNI 594 Query: 279 LYNEDDIKSRG--------------KRLSDHCPISIDY 302 E R SDH P+ + Sbjct: 595 NAIESVGYEYSRYNNNITNLFTADQYRSSDHDPVLVGL 632 >gi|291561139|emb|CBL39938.1| exodeoxyribonuclease III [butyrate-producing bacterium SS3/4] Length = 284 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 36/302 (11%), Positives = 76/302 (25%), Gaps = 78/302 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +++SWN+N L G +Y K DADI +QE + Sbjct: 36 KMISWNVNGLRACLGKGF---------------LEYLKESDADIFCIQESKLQEGQVDL- 79 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + +++ + + A+ K + + D R Sbjct: 80 ELPGYHQYWNYAEKKGY----------SGTAMFTKEEPIAVTYGLGIEEHDHEGR----- 124 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ + +V+ + + + + L+ + P Sbjct: 125 ----VITAEFPEYYVVTCYTPNSQDGLKRLDYRMQWEDAFRAYLKELE--------TKKP 172 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + GD N + + + F + Sbjct: 173 VIFCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAKFTELLEAGFVDTFRYFYPDQEGIYS 232 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF + ++ L+ + SDHCP+ + Sbjct: 233 WWSYRFSARAKNAGWRIDYFCVSESLKDRLVDAKIHTEV-----------MGSDHCPVEL 281 Query: 301 DY 302 D Sbjct: 282 DI 283 >gi|302541699|ref|ZP_07294041.1| exodeoxyribonuclease III [Streptomyces hygroscopicus ATCC 53653] gi|302459317|gb|EFL22410.1| exodeoxyribonuclease III [Streptomyces himastatinicus ATCC 53653] Length = 259 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 78/302 (25%), Gaps = 70/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N T+ L + ++ D++ +QE A Sbjct: 1 MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCVQETKCAEAA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + R + + + +AV + S L G D R Sbjct: 42 -------FPFEPLRELGYEAAVNATGRWNGVAVLSRVGLDEVVSG-LPGGPDYEGDQEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + V +++ + + Y + L++ + + + Sbjct: 94 AIAATC-----GPVRVWSVYVPNGREIGHPHYDYK------LRWLDTLREAVGEDAKGPR 142 Query: 204 PFVIAGDFNRKINYLGN---------------NDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF + GDFN + + P+ + Sbjct: 143 PFAVLGDFNVAPTDDDVWDRTRFDGLTHVTDKEREALAALRGAGLSDVVPRPLKYD-HPF 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID + D + +GK SDH P+ Sbjct: 202 TYWDYRELCFPKNRGMRIDLVYGNGAFADA-------VGDAYVDREERKGKGASDHAPVV 254 Query: 300 ID 301 +D Sbjct: 255 VD 256 >gi|229168476|ref|ZP_04296199.1| Exodeoxyribonuclease [Bacillus cereus AH621] gi|228614882|gb|EEK71984.1| Exodeoxyribonuclease [Bacillus cereus AH621] Length = 252 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 84/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + +Y + +ADI LQE+ + + Sbjct: 1 MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQSGQIDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ + + + ++ A+ K + + D R Sbjct: 47 NPEGYYTYW-----------NYAVKKGYSGTAIFTKKEPISVTYGLGIEEHDQEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + + + L + Sbjct: 92 -----VITLEFDDFYMITLYTPNSKRGLERLDYRMEWEDDFRAYIKRL--------DEKK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + + + + + A Sbjct: 139 PVIFCGDLNVAHKEVDLKNPKSNRKNPGFSDEEREKFTCVLEAGFIDTYRYLYPDQEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV+ + + + + SDHCP+ Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVISERLKHKITDAKINSEV-----------MGSDHCPVE 247 Query: 300 IDYDF 304 + +F Sbjct: 248 LHINF 252 >gi|193215019|ref|YP_001996218.1| endonuclease/exonuclease/phosphatase [Chloroherpeton thalassium ATCC 35110] gi|193088496|gb|ACF13771.1| Endonuclease/exonuclease/phosphatase [Chloroherpeton thalassium ATCC 35110] Length = 344 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 37/299 (12%), Positives = 80/299 (26%), Gaps = 45/299 (15%) Query: 2 IRKYVLALVFFLVPCTASV-----AQKVRLVSWNINTLSEQEGVS-------LWKNSVKR 49 I+ + L L+ ++ C + + + L WN+ L + + Sbjct: 3 IKPFFLLLLGWIFFCQSPLFSQNKPDSLLLAWWNVENLFDTTDDPQTKDEEFTPNGKKQW 62 Query: 50 TTSDYTL----LRQYAKNLD---------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE 96 T L Q ++ DI+ E+ + +F S Sbjct: 63 TEVRLAQKMKNLAQVILDMKTAPIASGKMPDIIGFCEVEHQALLDTLFC----DYIKSRN 118 Query: 97 RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK 156 + + + I A K ++V + +R +E+ E+ GK Sbjct: 119 YAFIYKETEDFRGIDIGFAYDKNRLQVKS----FKAHPVVINEEHSRDILEVEFEVQGKT 174 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216 + V H S + + + K V+ GDFN + Sbjct: 175 LVVFGNHWPSRSGGKKRSEPKRAKAAAILRA----AIDARLAKNPSADIVLLGDFNDEPK 230 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-------ANKNLRNKIPIDYFVMDQNAYK 268 K + + + + C + +D+ ++ + Sbjct: 231 SPSIKKSL-KANGSFEEVKQASDGRLYDCWKGSDAPGSYIYKNEWNKLDHAIVSKGLLD 288 >gi|119897033|ref|YP_932246.1| hypothetical protein azo0742 [Azoarcus sp. BH72] gi|119669446|emb|CAL93359.1| conserved hypothetical protein [Azoarcus sp. BH72] Length = 249 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 86/286 (30%), Gaps = 48/286 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------SY 77 +R+ ++NI+ Q + + LR+ ++LD D+VFLQE+ S Sbjct: 3 LRICTYNIHKGFSQFNRRMVVHD----------LRERLRSLDVDLVFLQEVQGLHLRHSR 52 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + + H A+ ++ + + + S Sbjct: 53 RHADWPAHPQYEFLAEDVWHQTAYGGNAVYDHGHHGNAILSRHAILSSDNQDV-----SD 107 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R R + V++ G+ V + + S +Q + L + + + Sbjct: 108 HRFERRGLLHCEVQLPGEDTVVHCVCVHLGLMAGS-----------RRRQMEALAERMER 156 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 P +IAGDFN N+ + + F + + + Sbjct: 157 LAPDGAPLIIAGDFNDWRNHADS-----VLCRRLGLVEAFGAGSVRPPRSFPSALPLFRL 211 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + F R+SDH ++ D + Sbjct: 212 DRIYVRG----------FQVRRAEVHYG-EPWSRISDHAALTADLE 246 >gi|326388588|ref|ZP_08210181.1| exodeoxyribonuclease III [Novosphingobium nitrogenifigens DSM 19370] gi|326206839|gb|EGD57663.1| exodeoxyribonuclease III [Novosphingobium nitrogenifigens DSM 19370] Length = 261 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 83/304 (27%), Gaps = 71/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + +WNIN + ++ D++ LQE+ + Sbjct: 2 IEIATWNIN----------------SVRLRIDQVERFLTQEKPDVLCLQEI---KCAENL 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + S + +A+ + G +D + R Sbjct: 43 FPREMFERLGYGHM------AVSGQKGYHGVAIVSRLPLRE------TGREDWQANGEAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + VEI G +++ ++++ + + + Q+ +L+ + Sbjct: 91 ---HVGVEILGHDLFLDNVYIPAGGDVPD-----REANPKFGQKLDFLERMTRWSEGLDR 142 Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GDFN D + +D + K + Sbjct: 143 PTLLVGDFNIAPLECDVYDHKALLKVVSHTPVEVEALGRLAAAHDWVDLGRKHIPAPERN 202 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +D+ F E R ++ SDH P+ Sbjct: 203 YSWWSYRSYWRAKDQGRRLDHMWASPEVAARSQGHRFVEET-------RRWEQPSDHIPL 255 Query: 299 SIDY 302 + Sbjct: 256 ITGF 259 >gi|256395293|ref|YP_003116857.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM 44928] gi|256361519|gb|ACU75016.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM 44928] Length = 252 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 33/281 (11%), Positives = 77/281 (27%), Gaps = 33/281 (11%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+R++S N + L + + D D+V LQE+ + Sbjct: 3 KIRVLSLNTLY-------------KDKPRVRLRALAEVLADSDYDVVCLQELSLPPSFGL 49 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR-AG 141 + Y+ + + + V + + + + Sbjct: 50 IRSLTKTSFPYAAHGTRLPTVAG-------GLLTLSRVPLVGHRYHVVAAPAKWRADVVM 102 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + ++G+ V + HL D + +P + + + I + +S Sbjct: 103 RRGVLVARFAVDGEFFTVTNTHLSPNHETD--WSQAAPFTRVQQAELARMAQAIRR-IDS 159 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 P + GDFN + ++ L + + +D + Sbjct: 160 GEPVIAVGDFNVPRDS-----WLFEGFQAASGLRDAFDGDAATTFRPVPGWDGAALDQIL 214 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + + LSDH ++ Sbjct: 215 VSPGVPAKAE----VVMQEKVRMGDGQDRYLSDHYGVAATI 251 >gi|144899913|emb|CAM76777.1| Endonuclease/exonuclease/phosphatase [Magnetospirillum gryphiswaldense MSR-1] Length = 256 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 87/303 (28%), Gaps = 71/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 VR+ +WNIN + + + ++ D++ LQE+ Sbjct: 2 VRIATWNIN----------------SVKARLPNVMDWLQSAKPDVLLLQEIKCQ---DDG 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + +A+ ++ Q D +R Sbjct: 43 FPTLDFQS-------AGWQVAVHGQKSYNGVAILSRHTLDNVQIRLPGDEADEQARY--- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + + + ++L + + Y + + L D + + Sbjct: 93 ------IQADIQGLRIASLYLPNGNPCPGEKFDYK------LRWMRRLVDHSKTLLDQGM 140 Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 PFV+ GD+N D ++ + F Sbjct: 141 PFVLGGDYNICPTDADVYDPAGWADDALCRPESRALFRELCHLGLTEAFRALHPQPGLYT 200 Query: 249 KN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 N + ID+F++ A LI + D ++ SDH PI I Sbjct: 201 FWDYQAGAWPRGNGLRIDHFLLSPAAADRLIAC-------DIDKEPRGREKASDHTPIWI 253 Query: 301 DYD 303 D + Sbjct: 254 DLN 256 >gi|333030057|ref|ZP_08458118.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM 18011] gi|332740654|gb|EGJ71136.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM 18011] Length = 339 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 40/350 (11%), Positives = 86/350 (24%), Gaps = 62/350 (17%) Query: 2 IRKYVLAL------VFFLVPCTASVAQKVRLVSWNINTLSE-------QEGVSLWKNSVK 48 ++K ++ L +FFL+ C + +N+ L + + L + Sbjct: 1 MKKIIITLSVALIGLFFLLSCKKKAETIYSIAFYNVENLFDTIHDSGKNDYEYLPDGRRE 60 Query: 49 RTTS----DYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTER 97 + Q L D ++ L E+ ++ + + + Y Sbjct: 61 WDREKYTNKLKNIAQVLSELSRDRVKEGPVVIGLAEVENFRVLQDLISEPALKNEYQFVH 120 Query: 98 LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 KR I A+ K + + R + + + +++ Sbjct: 121 YEGPDKR----GIDCALLYNPKLFTPTASVLVPSTPFEGDTIHKTRGFLVVTGNVADEEM 176 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 + H S +P + Q + + D + V+ GD N Sbjct: 177 TFIVNHWPSR-------GAKAPVRVHAANQVKAITDSLYA-VNKKAKIVVMGDLNDDPMD 228 Query: 218 LGN------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK--- 268 + +D D ++ Q K Sbjct: 229 ESVSVAFGAKKFVKDVKKGGFYNPWWEILEDKGVGTLMYRGAWNLFDQIIISQPLLKAKK 288 Query: 269 ---------------FLIQESFSEILYNEDDIKSRGKRLSDHCP--ISID 301 F + ++ SDH P I ++ Sbjct: 289 GLRYVDSEVFMRDYLFQKTGKYKGSPLRTHGGQTWLNGYSDHLPTIIYVE 338 >gi|260170561|ref|ZP_05756973.1| hypothetical protein BacD2_01735 [Bacteroides sp. D2] gi|315918907|ref|ZP_07915147.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313692782|gb|EFS29617.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 366 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 85/299 (28%), Gaps = 68/299 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + ++N++ + ++ + Y +NL ADI+ QE + Sbjct: 110 LTVATYNVDAFNHEDTGYSC-----------KEIASYMRNLQADILCFQEF----GINDE 154 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F ++ S +AV + + +K+ Sbjct: 155 FGVDSIAAVLSDWPYYFIP-ISPEGKHLLQLAVFSRYPIKEENLIVYPDSKNCS------ 207 Query: 144 RAVELLVEINGKKIWVLDIHLKSF-------------CFLDSLENTY---------SPSC 181 + +E NG+ I + + HL++ DS + Sbjct: 208 --LWCDIETNGRTIRLFNNHLQTTEVSQNKRKLEKGLRTDDSQRVERAAVGLIDGLHENF 265 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + QA LK I S P ++ GDFN + + + F Sbjct: 266 RKRAAQANTLKQLI---AASPYPTIVCGDFNSLPSSYVYHTVKGDKLQDG-----FQTSG 317 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 K ++ + IDY + N D S SDH P+ + Sbjct: 318 HGYMYTFKFFKHLLRIDYILHSPEL--------------NSTDYFSPDLTYSDHNPVVM 362 >gi|255971866|ref|ZP_05422452.1| exonuclease III [Enterococcus faecalis T1] gi|255962884|gb|EET95360.1| exonuclease III [Enterococcus faecalis T1] Length = 257 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 36/306 (11%), Positives = 78/306 (25%), Gaps = 78/306 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ +SWN+N L + LDAD LQE A Sbjct: 6 TMKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQI 49 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + +++ +S A++VR Sbjct: 50 DLELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------EAHDQEG 95 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R ++ + + +++ + + + + ++ + + Sbjct: 96 R-----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK 143 Query: 203 VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N + + + + F Sbjct: 144 -PVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGI 202 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYFV+ ++ + L+ + SDHCP+ Sbjct: 203 YSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPV 251 Query: 299 SIDYDF 304 + DF Sbjct: 252 EVVLDF 257 >gi|256419904|ref|YP_003120557.1| endonuclease/exonuclease/phosphatase [Chitinophaga pinensis DSM 2588] gi|256034812|gb|ACU58356.1| Endonuclease/exonuclease/phosphatase [Chitinophaga pinensis DSM 2588] Length = 371 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 94/325 (28%), Gaps = 62/325 (19%) Query: 4 KYVLALVFFLVPCT----ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 K + A V F P + A+ A + ++S+N+ K + + + Sbjct: 81 KSISAFVAFNYPTSGKQFANPAGSLTIMSYNVAQFGLY--------REKDSKYNREAMFA 132 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 K + DIV LQ+ + + S + + H + + Sbjct: 133 LIKKQELDIVCLQDFYTSEKKNDFNNREDISREMKLPYRFFSSDFNRDGMQHWGSIIYSR 192 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN---- 175 + + S S + + NG I ++++HL S+ F + Sbjct: 193 YPIIKSDKLKMSYGPRSES------LIYADIVKNGDTIRIINMHLASYRFNERDYRSIEK 246 Query: 176 -----------------TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 + S+QA + +I+ P ++ GDFN Sbjct: 247 IKKQEDTGLVATRNIVQKMRDAYVDRSKQADIVSAFISTCP---YPVILCGDFNDTPASY 303 Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 D F ++ L + IDY D++ Sbjct: 304 TYFTI------RGDLQDAFLRKGSGIGRTYAGLAPTLRIDYIFTDKS------------- 344 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303 + + + LSDH P+ + Sbjct: 345 -FKVNSFRKINSTLSDHYPVIANVS 368 >gi|124025252|ref|YP_001014368.1| exodeoxyribonuclease III [Prochlorococcus marinus str. NATL1A] gi|123960320|gb|ABM75103.1| exodeoxyribonuclease III [Prochlorococcus marinus str. NATL1A] Length = 275 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 30/302 (9%), Positives = 86/302 (28%), Gaps = 63/302 (20%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + +WN+N S ++++ DI+ LQE + + Sbjct: 3 VATWNVN----------------SIRSRIDHVKEWLITNKIDILCLQETKTEDKF----- 41 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + S + +A+ + + D + Sbjct: 42 -----FPIENFSDLGYEVSISGQKSYNGVAIISRFPINNIKIGFNEVINDYQDLSILSEQ 96 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + + + I ++++++ + ++S + Y + L+ ++ + ++ P Sbjct: 97 KRI-ISADINDIRIINVYVPNGSSINSDKFIYKKK------WLECLQVYLREINKNNTPI 149 Query: 206 VIAGDFNRKINYLGNNDDFW------------KTIDP--NDSLIRFPKEKDSRCNANKNL 251 + GDFN + + + L + + Sbjct: 150 CLLGDFNIAPEDRDIHTPSRYEESIMASSKERELLKDALGGELEDVFRIFEPGEKNWSWW 209 Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ + ++ D + ++ SDH P+ +D Sbjct: 210 DYRHSAWERDKGWRIDHIYLTEDILSCANSCWI-------DKEQRSREKPSDHAPVVVDI 262 Query: 303 DF 304 ++ Sbjct: 263 NW 264 >gi|328541797|ref|YP_004301906.1| exodeoxyribonuclease III [polymorphum gilvum SL003B-26A1] gi|326411549|gb|ADZ68612.1| Exodeoxyribonuclease III [Polymorphum gilvum SL003B-26A1] Length = 269 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 30/309 (9%), Positives = 78/309 (25%), Gaps = 68/309 (22%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++ + +WNIN ++ ++ D++ LQE +A Sbjct: 2 TDRLTIATWNIN----------------SVRLRLPIVEKFILEQAPDVLCLQETKCPDA- 44 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + +L + + +A + + D+ Sbjct: 45 --------NFPEAAFRKLGYPHIAINGQKGYHGVATISRRPLANIEKRGFCDKGDARH-- 94 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + + V + + V + ++ + D + +P +K W+ + Sbjct: 95 -----IAVDVAFSDSPLRVHNFYVPAG--GDEPDAAINPKFGHKLDFMAEMKAWLNGAET 147 Query: 201 SLVPFVIAGDFNRKI--NYLGNNDDFWKTI--------------DPNDSLIRFPKEKDSR 244 P V+ GD N + + ++ K + + + Sbjct: 148 E-RPAVLVGDLNVAPYEHDVWSHKALLKIVSHTPVETELLEAIRSHGGWIDAMRRFVPME 206 Query: 245 CNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + +D+ + L + SD Sbjct: 207 EKLYTWWSYRARDWAAADKGRRLDHVWVSPPLADRLKA-------MRVLRAARGWDKPSD 259 Query: 295 HCPISIDYD 303 H P+ ++ Sbjct: 260 HAPVIAVFE 268 >gi|282864972|ref|ZP_06274026.1| exodeoxyribonuclease III Xth [Streptomyces sp. ACTE] gi|282560397|gb|EFB65945.1| exodeoxyribonuclease III Xth [Streptomyces sp. ACTE] Length = 259 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 74/304 (24%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N T+ L + ++ D++ LQE Sbjct: 1 MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCLQETKCT------ 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + + + + + L + R Sbjct: 39 ----LEQFPAEALREAGYESAVNATGRWNGVGLLSRVGLTDVVTG-LPDGPEYEGVQEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + V +++ + + Y + + L+ + V Sbjct: 94 AVSAAC-----GPVRVWSVYVPNGREVAHDHYAYK------LRWLEALRKAVAADAAGPV 142 Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF + GDFN D + P+ + Sbjct: 143 PFAVLGDFNIAPTDDDVWDPSLFEGATHVTPAERDALAALRAGGLSDVVPRPLKYD-HPY 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID + + D + +GK SDH P+ Sbjct: 202 TYWDYRQLGFPKNRGMRIDLVYGNAPFAAAVQDSYV-------DREERKGKGASDHAPVV 254 Query: 300 IDYD 303 +D D Sbjct: 255 VDLD 258 >gi|209518265|ref|ZP_03267091.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. H160] gi|209501285|gb|EEA01315.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. H160] Length = 290 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 86/313 (27%), Gaps = 58/313 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 ++LV WNI +G D + + A+ L D D++ LQE+ Sbjct: 1 MKLVDWNIQWGCGVDG-----------RVDLGRIVREARALCDFDVLCLQEVTRGFNEDP 49 Query: 75 --------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 S + A++ S S + A+ + Sbjct: 50 AAGGLKGAPSSDQFAELAALLPEMTVLDAIGSDLPSLGASRHRRQFGNAIVTRLPVRQVL 109 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 + L D + R A+E ++E + + V+ HL+ + L L Q Sbjct: 110 RHSLPWPADPAKPSMLRVALEAVLEADIGPLRVISTHLEFYSEKQRLAQVAR--LRELHQ 167 Query: 187 QAQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 +A + ++ PF ++ GDFN D + + Sbjct: 168 EACNHARAPARGEKPDSPFADTARPISAILCGDFNSAFGDAAYCRMLEPIADAPAFVDAW 227 Query: 238 PKEKDSRCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 D+ + Q+ + Sbjct: 228 AGAHSGAPRVATVGLYDHEQWPDGPFACDFVFVTQDLSTRVASCEV-----------DPH 276 Query: 290 KRLSDHCPISIDY 302 R SDH P+ ++ Sbjct: 277 SRSSDHQPMWLEL 289 >gi|56697356|ref|YP_167724.1| exodeoxyribonuclease III [Ruegeria pomeroyi DSS-3] gi|56679093|gb|AAV95759.1| exodeoxyribonuclease III [Ruegeria pomeroyi DSS-3] Length = 268 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 88/306 (28%), Gaps = 65/306 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + L + + D+ LQE+ S V + Sbjct: 1 MKIATFNING----------------IKARAEALPAWLDSAQPDVALLQEIKS---VDES 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + ++ +A+ K D +R Sbjct: 42 FPREMF-------EERGYNVETHGQKGFNGVAILSKLPLEDVSRGLPGDDSDEQARW--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLD---SLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +E V + + + + ++L + ++ S + + + L+ T+ Sbjct: 92 --IEATV-VGKQALRLCGLYLPNGNPVELTESGDPVPGGKYDYKLRWMERLQARATELMA 148 Query: 201 SLVPFVIAGDFNRKIN-------YLGNNDDFWKTIDPNDS-------LIRFPKEKDSRCN 246 + P ++AGD+N D ++ + + Sbjct: 149 AEEPALMAGDYNIIPQAEDAKRPEAWREDALFRPESRAAFRRILNLGFTEAFRARVQGPG 208 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+F++ A + D + SDH P Sbjct: 209 HYSFWDYQAGAWNRNDGIRIDHFLLTPQAADLMRDCGI-------DKEVRGRDKPSDHVP 261 Query: 298 ISIDYD 303 + ++ D Sbjct: 262 VWVELD 267 >gi|329906029|ref|ZP_08274330.1| Endonuclease/exonuclease/phosphatase [Oxalobacteraceae bacterium IMCC9480] gi|327547361|gb|EGF32191.1| Endonuclease/exonuclease/phosphatase [Oxalobacteraceae bacterium IMCC9480] Length = 264 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 87/299 (29%), Gaps = 58/299 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+R+ ++NI+ S + L+Q + A++ FLQE+ + V Sbjct: 2 KIRIATYNIH----------KGVSSFGSKPRIVALKQALATMQANVYFLQEVQGRHDVLA 51 Query: 83 VFPKNTW------CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 +W + + H A+ ++ + S Sbjct: 52 ARHAASWPGQSQHDFLAGDSHQAVYGMNAVYDHGHHGNALLSNLPIASSRNQDV-----S 106 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + +R + ++ ++ + +HL F +QA+ L + + Sbjct: 107 DHKYESRGILHCVIHLDDLPVHCYVVHLGLFAGG-------------RRRQAEALIEAVL 153 Query: 197 QKKESLVPFVIAGDFNRKINYLGN--------NDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P +IAGDFN N+L + F + + + + Sbjct: 154 DSAPPGAPVIIAGDFNDWGNHLSEALRSRLGVTEVFDERVPSVGMGSFLRRLRGPDAKIQ 213 Query: 249 KNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + +S + + RLSDH PI Sbjct: 214 PARTFPAMLPFLQLDRIYVRG-----FAIDSAEVLH------GALWARLSDHAPIVATL 261 >gi|254441056|ref|ZP_05054549.1| endonuclease/exonuclease/phosphatase family [Octadecabacter antarcticus 307] gi|198251134|gb|EDY75449.1| endonuclease/exonuclease/phosphatase family [Octadecabacter antarcticus 307] Length = 333 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 42/331 (12%), Positives = 95/331 (28%), Gaps = 52/331 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT--------LLRQYAKNLDADIVFLQEMG 75 +++ ++N+ S + R + + L LDAD + + E Sbjct: 1 MKIATYNVEWFSNLFDNAGKLYDDDRWSGRWDVTRAQHTTALGAVFAALDADGIMVIEGP 60 Query: 76 SYNAVAKVFPKNT-WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 +A + + ++ + V + Sbjct: 61 DSHAKRDGAAALEGFAARFGIRARQAVIGYVNDTQQEILFLYDPDVLNVRHDPRIDGAPR 120 Query: 135 D-------------SFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTY--S 178 ++ +EL V I+G ++ +H KS + + Sbjct: 121 FDGAIKLDLDVDAQPDDVRWSKPPLELEVTHISGTVFRLIGVHAKSKAPHGAKTDAQVMR 180 Query: 179 PSCSLLSQQAQW---LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--------- 226 S +Q L+ + + + ++ GDFN F + Sbjct: 181 ISIENRRKQLAQCIWLRRRVEAQLAAGDNLIVLGDFNDGPGLDEYEKLFGRSGVEIVLGE 240 Query: 227 -----TIDPNDSLIRFPKEKDSRCNANKNLRNKIP-----IDYFVMDQNA----YKFLIQ 272 DP+ + + + A + +DY ++ Q+ K++I Sbjct: 241 GQGEQLFDPHARMALSQQIGAAPVTARFTVGPDRRFLSALLDYIMVSQSVRAMGAKWVIM 300 Query: 273 ESFSE-ILYNEDDIKSRGKRLSDHCPISIDY 302 F + + + D+ + SDH P+ +D Sbjct: 301 HPFDDPKCFADKDLCAALLTASDHFPVVLDI 331 >gi|311070625|ref|YP_003975548.1| exodeoxyribonuclease III [Bacillus atrophaeus 1942] gi|310871142|gb|ADP34617.1| exodeoxyribonuclease III [Bacillus atrophaeus 1942] Length = 252 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 86/304 (28%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + Y + + DI LQE+ + K+ Sbjct: 1 MKLMSWNVNGLRALLTKMNFNS--------------YLEEENVDIFCLQEIKLQDGQIKL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ + ++++ + + A+ K + + D R Sbjct: 47 EPE-GYHVYWNYAEKKGY----------SGTAIFTKKEPLAVTYGLGIKEHDQEGRL--- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + ++V+ ++ + + + L + Sbjct: 93 ------ITLEFENMYVITVYTPNAKRGLERIDYRMDWEDAFLSYIKAL--------DVKK 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + + + F + A Sbjct: 139 PVVLCGDLNVAHQEIDLKNPKANRKNAGFSDQERERFSQMLEEGFIDTFRYLHPDQEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYF++ + K + + SDHCP+ Sbjct: 199 SWWSYRMNARAKNVGWRLDYFIVSERLKKQIRGAKICNEV-----------MGSDHCPVE 247 Query: 300 IDYD 303 + D Sbjct: 248 LTID 251 >gi|237737412|ref|ZP_04567893.1| exodeoxyribonuclease III [Fusobacterium mortiferum ATCC 9817] gi|229421274|gb|EEO36321.1| exodeoxyribonuclease III [Fusobacterium mortiferum ATCC 9817] Length = 251 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 78/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L G Y K ADI LQE Sbjct: 1 MKLISWNVNGLRACVGKGF---------------LDYFKEQQADIFCLQETKLQEG-QIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ +S I+V R Sbjct: 45 LELDGYHQYWNYAEKKGYSGTAIFTKEK-PISVHYGIGIEE-------------HDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +K +++ ++ + + + L + Sbjct: 91 -----VITLEFEKFYMITVYTPNSQEKLARLDYRMKWEEDFKNYLLEL--------DKKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F ++ + Sbjct: 138 PVIVCGDLNVAHKEIDLKNPKTNRKNAGFSDEEREKMTKLLESGFVDSFRYFYPNKTDIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ + + + SDHCP+ Sbjct: 198 SWWSYRFSARAKNAGWRIDYFLVSDRIKENMKGAEIHTEIL-----------GSDHCPVL 246 Query: 300 IDYD 303 ++ D Sbjct: 247 LNID 250 >gi|237807677|ref|YP_002892117.1| exodeoxyribonuclease III [Tolumonas auensis DSM 9187] gi|237499938|gb|ACQ92531.1| exodeoxyribonuclease III [Tolumonas auensis DSM 9187] Length = 268 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 84/309 (27%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ + DI+ LQE ++ Sbjct: 1 MKIISFNINGL----------------RARPHQLQAIVEQHHPDIIGLQETKVHDDA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + + H +A+ + + G + + R Sbjct: 42 -------FPVSIIEELGYQVHFHGQKAHYGVALLSRKTP----DAVIKGFPEDDEESQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ NG+ + V + F + + + L +++ Q Sbjct: 91 LIIGRFMQENGRLLTVFN-----GYFPQGESRDHPIKFPAKQKFYRDLLNYLQQNHTPDE 145 Query: 204 PFVIAGDFNRK---------------------INYLGNNDDFWKTIDPNDSLIRFPKEKD 242 VI GD N ++L ++ + + + + Sbjct: 146 DIVIMGDMNISSTDLDIGIGEANRKRWLQTGKCSFLPEEREWLNELLAWGFVDTWRSQNP 205 Query: 243 SRCNANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + ID + + L Q D ++ S Sbjct: 206 DSNEHFSWFDYRSRGFDDNRGLRIDLLLATSVLQQRLQQTGI-------DYEIRGMEKPS 258 Query: 294 DHCPISIDY 302 DH PI ++ Sbjct: 259 DHAPIWAEF 267 >gi|257783920|ref|YP_003179137.1| exodeoxyribonuclease III Xth [Atopobium parvulum DSM 20469] gi|257472427|gb|ACV50546.1| exodeoxyribonuclease III Xth [Atopobium parvulum DSM 20469] Length = 259 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 79/309 (25%), Gaps = 76/309 (24%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 S Q+ +L+SWN+N L + + ++AD+ LQE Sbjct: 2 SQTQEYKLISWNVNGLRAVLKKEPSF-------------TEIFETINADVFALQETKLQE 48 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 ++ + ++ ++ AV + + D Sbjct: 49 GQVEL-----------DLPGYVQTWNYADRKGYSGTAVFSRETPLQVIRQIGCPVADDEG 97 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R + + +K W + ++ + + + L Sbjct: 98 R---------VCALEFEKFWFVCVYTPNSKDQLARLDERLEWDQHYRDFLAEL------- 141 Query: 199 KESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDS 243 P + GDFN N + + + F Sbjct: 142 -SKQKPVITCGDFNVAHNEIDLKNPSSNRQNAGFSDEERESFTKLLDAGFTDTFRYRHPD 200 Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 A + IDYF++ + + S +Y SD Sbjct: 201 ITGAYSWWSYRFNARKNNAGWRIDYFLVSDRIAEQVKSASILSEIY-----------GSD 249 Query: 295 HCPISIDYD 303 HCPI + + Sbjct: 250 HCPIELSIE 258 >gi|289705726|ref|ZP_06502110.1| exodeoxyribonuclease III [Micrococcus luteus SK58] gi|289557566|gb|EFD50873.1| exodeoxyribonuclease III [Micrococcus luteus SK58] Length = 275 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 29/313 (9%), Positives = 77/313 (24%), Gaps = 73/313 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + + + + D D++ +QE + Sbjct: 1 MKIATWNVNSL----------------RARADRVEAFLERHDIDVLAIQETKCRDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS----YPLLGAKDSFSR 139 + + + +A+ + Q P G + Sbjct: 41 ------NFPWELFERAGYEVVHNGTSQWNGVAIASRVGLSDVQRGFPGQPHFGKGGVDPQ 94 Query: 140 AGNRRA---VELLVEINGKKIWVLDIHLKSFCF-LDSLENTYSPSCSLLSQQAQWLKDWI 195 +R V + + +++ + + +L + A Sbjct: 95 EESRAIGATVGAEAADGVAPVRLWSLYVPNGRGLENEHMGYKLEWLRVLQEHAAA----- 149 Query: 196 TQKKESLVPFVIAGDFNRKINY-----------------LGNNDDFWKTIDPNDSLIRFP 238 ++ +AGD+N + + + Sbjct: 150 RLAEDPDTRLALAGDWNIAPQDEDVWDIELFQREGYTHVSPAERAAFHAFEDAGLVDVVR 209 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + ID+ + + + D + +G Sbjct: 210 PRHPGP-GVYTYWDYTGLAFPKKKGMRIDFQLCSPALAQTVTDAWI-------DREERKG 261 Query: 290 KRLSDHCPISIDY 302 K SDH P+ ++ Sbjct: 262 KGASDHAPVVVEL 274 >gi|119945063|ref|YP_942743.1| exodeoxyribonuclease III [Psychromonas ingrahamii 37] gi|119863667|gb|ABM03144.1| Exodeoxyribonuclease III [Psychromonas ingrahamii 37] Length = 269 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 84/309 (27%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ +N V Sbjct: 1 MKVISFNINGL----------------RARLHQLQAIIDKHQPDVIGLQEIKVHNDV--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ KN + Q G A R Sbjct: 42 -------FPVADVEAMGYHVYFHGQKGHYGVAMLCKNKALDVQ----YGFPTDDEEAQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + G + +L+ F + + Q L ++ + + Sbjct: 91 MIMVTVQDKAGLPVRILN-----GYFPQGESQNHETKYPAKRKFYQDLNIYLNEYHTAED 145 Query: 204 PFVIAGDFNRK---------------------INYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++L ++ + + F Sbjct: 146 QLIVMGDINISRLDLDIGIGEVNAKRWLQTKKCSFLPEEREWLAKLMDFGLIDTFRLLNP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + + I D ++ S Sbjct: 206 EVSDQYSWFDYRSRGFDDNRGLRIDVILATETLANKTIDTGI-------DYELRAIEKPS 258 Query: 294 DHCPISIDY 302 DH PI ++ Sbjct: 259 DHAPIWTEF 267 >gi|91975059|ref|YP_567718.1| exodeoxyribonuclease III (xth) [Rhodopseudomonas palustris BisB5] gi|91681515|gb|ABE37817.1| exodeoxyribonuclease III (xth) [Rhodopseudomonas palustris BisB5] Length = 274 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 42/301 (13%), Positives = 76/301 (25%), Gaps = 70/301 (23%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 ++ ++NIN ++ L Q+ + DIV LQE+ + Sbjct: 15 KIATFNINNVN----------------KRLPNLLQWLRAAKPDIVCLQELKAEQR----- 53 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 ++ +A+ + ++ L G D Sbjct: 54 -----KFPEQALHDAGYNAAWVGQKTWNGVAILARKRSLIVTQTKLPGDADDQQARYIEA 108 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 A+ I V ++ + + S + L + S P Sbjct: 109 AI--------GGILVGCVYAPNGNPQPGPKFDDKIS------WMKRLNRHAGKLLASGAP 154 Query: 205 FVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA- 247 VIAGDFN + + K + + D R Sbjct: 155 VVIAGDFNVAPTALDIYPTKSWNEDALIQPESRRAYAKLLGQGWTDAVRALHPDQRVYTF 214 Query: 248 NKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 RN+ +D+ ++ L D + SDH P I Sbjct: 215 WTYWRNRFERDDGLRLDHLLVSPELASRLFAAGV-------DRAVRAREGASDHAPAWIV 267 Query: 302 Y 302 Sbjct: 268 L 268 >gi|297190600|ref|ZP_06907998.1| sphingomyelinase C [Streptomyces pristinaespiralis ATCC 25486] gi|297150553|gb|EDY61820.2| sphingomyelinase C [Streptomyces pristinaespiralis ATCC 25486] Length = 333 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 38/298 (12%), Positives = 85/298 (28%), Gaps = 31/298 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R++++N S+ + ++ D+V LQE ++ Sbjct: 44 SLRVLTYNAFLFSKSLYPNWGQDHRAAAIPAAP------FFQGNDVVVLQEAFDNSSSDA 97 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGAK 134 + + T + +AV K V ++ Y A Sbjct: 98 LLRGAAAQYPHRTPVMGRSKDGWDATGGAYSSTTPEDGGVAVLSKWPIVRKEQYVYKDAC 157 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + + N+ V ++++NG ++ V+ H +S + + S+Q + + + Sbjct: 158 GADWWS-NKGFVYAVLDVNGTRVHVVGTHAQS----TDPGCDAGEAAEMRSRQFRAMDAF 212 Query: 195 IT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN----- 248 + + + V+AGDFN + Sbjct: 213 LDGKNIPASEQVVVAGDFNVDSRTSEYASMLADGGLVGADARTGHPYSFDTSENSIAAER 272 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------KRLSDHCPISI 300 + +D+ + K + + S LSDH P+ Sbjct: 273 YPDDPREDLDHVLHRAGHAKPSGWTNEVIKERSAPWSVSSWGTTYTYTNLSDHYPVIA 330 >gi|145355640|ref|XP_001422066.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582305|gb|ABP00360.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 304 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 91/309 (29%), Gaps = 32/309 (10%) Query: 18 ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 A+ A VR+V++NI ++ ++ ++ + +++ LDAD++ LQE+ Sbjct: 5 AAAATSVRVVTYNILAQVYAKSAWFPWTPRALMKSKARRANVQKKLLALDADLMALQELD 64 Query: 76 S--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS------ 127 + K+ R + +K+ + + +A R + Sbjct: 65 GYEPSEENDARWKSWLREHGYESRYVQRTKKSNAKKDGSCVAWRASTFALEDSRNLEYND 124 Query: 128 --YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL--DIHLKSFCFLDSLENTYSPSCSL 183 Y L G D+ A + + +L F + + Sbjct: 125 IGYDLYGRDDANDETNENEARRRYLRDCVGNLTLLRRIKDGALVVFASTHLYWDPECADV 184 Query: 184 LSQQAQWL--------KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 QA+ L + + + + V +I GDFN ++ Sbjct: 185 KLAQAKMLIAECVKFRDEALIRAEGRPVHVIIGGDFNSDPQSDVYGAM--------NAAF 236 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 N IDY + ++ + SDH Sbjct: 237 TSVSNGREPQFTNVTPSFTACIDYVFLSSG--VRVVAVDEQPARDTLGEGLPNTGHPSDH 294 Query: 296 CPISIDYDF 304 P++ +F Sbjct: 295 LPVAAKIEF 303 >gi|47097522|ref|ZP_00235061.1| exodeoxyribonuclease [Listeria monocytogenes str. 1/2a F6854] gi|224503787|ref|ZP_03672094.1| exodeoxyribonuclease III [Listeria monocytogenes FSL R2-561] gi|254832537|ref|ZP_05237192.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes 10403S] gi|254901191|ref|ZP_05261115.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes J0161] gi|254914076|ref|ZP_05264088.1| exodeoxyribonuclease [Listeria monocytogenes J2818] gi|254938390|ref|ZP_05270087.1| exodeoxyribonuclease [Listeria monocytogenes F6900] gi|47014105|gb|EAL05099.1| exodeoxyribonuclease [Listeria monocytogenes str. 1/2a F6854] gi|258611002|gb|EEW23610.1| exodeoxyribonuclease [Listeria monocytogenes F6900] gi|293592096|gb|EFG00431.1| exodeoxyribonuclease [Listeria monocytogenes J2818] Length = 251 Score = 90.0 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 84/304 (27%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL+SWN+N L +Y + +DADI LQE Sbjct: 1 MRLISWNVNGLRAAVKKGF---------------LEYFEEVDADIFCLQETKLQEG-QIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + Q + D+ R Sbjct: 45 LDLPAYKDYWN----------YAVKKGYSGTAIFTKVEPLSVQYGLGIPEHDTEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++ +++ ++ + + +++ + Sbjct: 91 -----VITLEFEEFFMVTVYTPN-------SQAELKRLDYRMTFEDAILEYVK-NLDKTK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + F +A Sbjct: 138 PVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + L+ + SDHCP+ Sbjct: 198 SWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVL-----------GSDHCPVE 246 Query: 300 IDYD 303 ++ + Sbjct: 247 LELN 250 >gi|87122729|ref|ZP_01078604.1| extracellular nuclease-related protein [Marinomonas sp. MED121] gi|86162026|gb|EAQ63316.1| extracellular nuclease-related protein [Marinomonas sp. MED121] Length = 848 Score = 90.0 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 46/357 (12%), Positives = 97/357 (27%), Gaps = 73/357 (20%) Query: 19 SVAQKVRLVSWNINTLSEQE--------GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 S +R+ S+N+ L G + T + +DADIV Sbjct: 461 SADGNLRVASFNVLNLFNSPFGGDANAHGDNRGAEESTEYQLQLTKIANAISMIDADIVG 520 Query: 71 LQEMGSY-----NAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 L E+ + +A+A + T ++ + I + R V + Sbjct: 521 LMEIENNGFGEASAIAALVDQINTTQAASALPYSYVSAGDDVGTDAIAVGLIYRADVVSL 580 Query: 124 LQQSY-------PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174 + + A+ + R ++ + + +K+ ++ HLKS + Sbjct: 581 VDDAVKIDMPEQHGTDAEGTNFDKYMRVSLLQKFQHIESKRKLSIVVNHLKSKGSACIED 640 Query: 175 NTYSPSCS-----LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-------- 221 A L D+I + ++ GD N Sbjct: 641 TANPEDAQGSCNAFRVSAAVTLGDYIATNVQGD--VLVMGDLNAYGKEDPVRVLTDYDPL 698 Query: 222 ----------DDFWKTIDPNDSL-----------IRFPKEKDSRCNANKNLRNKIPIDYF 260 D N + ++ + +D+ Sbjct: 699 TAERKIVTAEQATLNGEDLNGGASVEVSQSYGLTNLVEHFQGAKGYSYTYSGELGSLDHA 758 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-------------SDHCPISIDYDF 304 + + + K ++ I E ++ + SDH P+ I+ D+ Sbjct: 759 LANASLMKSIVATDDWHINSAESNLFEYSSQYTGDLVKSDNAYSSSDHDPVIIEIDY 815 >gi|114762656|ref|ZP_01442090.1| endonuclease/exonuclease/phosphatase family protein [Pelagibaca bermudensis HTCC2601] gi|114544566|gb|EAU47572.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius sp. HTCC2601] Length = 333 Score = 90.0 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 47/332 (14%), Positives = 93/332 (28%), Gaps = 52/332 (15%) Query: 24 VRLVSWNINTLSEQEGVSL----WKNSVKRT----TSDYTLLRQYAKNLDADIVFLQEMG 75 +RL ++NI + R L +DAD V + E Sbjct: 1 MRLATYNIEWFDALFDDAGQLLNDDGWSARHDITRQQQTEALGIVFTAMDADAVMIIEAP 60 Query: 76 SYNAVAKVFPKNT-WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 N+ + + + ++ A+ V A Sbjct: 61 DSNSRRDTDRALKTFAEAFELRTRDVLTGFVNDTQQEIALLYDPSVFTVRHAPGESSDAP 120 Query: 135 DSFSRA--------------GNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYS- 178 ++ +E+ V +GK + ++ HLKS + Sbjct: 121 RFDHVFHIDLDIDATRDKVSFSKPPLEIEAVTASGKVLRLIGAHLKSKAPHGARTRDQIM 180 Query: 179 ----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-------- 226 + QA WL+ + E ++ GD N F + Sbjct: 181 RLAIANRRKQLAQAIWLRRRVEALLEEGESVIVMGDLNDGPGLDEYEHLFGRSSVEIVLG 240 Query: 227 -----TIDPNDSLIRFPKEKDSRCNANKNLRNKIP-----IDYFVMDQNAY----KFLIQ 272 DP+ K A L+ + +DY ++ ++ + I Sbjct: 241 DGGPPLFDPHAERALASKFGAQPTTARFYLKPEKRYMQAMLDYIMVSEDLARTRPSWRIW 300 Query: 273 ESFSE-ILYNEDDIKSRGKRLSDHCPISIDYD 303 F + + + +++ SDH P+++D D Sbjct: 301 HPFDDPVCWRTPELREALLDASDHFPVTLDID 332 >gi|42524876|ref|NP_970256.1| exodeoxyribonuclease III [Bdellovibrio bacteriovorus HD100] gi|39577087|emb|CAE78316.1| Exodeoxyribonuclease III [Bdellovibrio bacteriovorus HD100] Length = 285 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 38/320 (11%), Positives = 81/320 (25%), Gaps = 74/320 (23%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 L+ + + V+++SWN+N + L + D Sbjct: 15 LLLIDAFDGVETQGETVKIISWNVNGIRACHKKG---------------LLDFVNREKPD 59 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 I +QE + + + ++ +A + Sbjct: 60 IFCIQETK--------AHIDQVENELKKLTWNHSYWSSAVKKGYSGVATFVNEEPKSVEY 111 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 + +S R + + + +I+ + D N Sbjct: 112 GWGISEYESEGRI---------IISDHGPFDLYNIYFPNGGSGDVRHNFKQQ-------F 155 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPND 232 + L + +K + V+ GD+N + +D + + Sbjct: 156 LKDLNHHLKEKLATGRQVVVVGDYNVAHEAIDVHDPVRLSKVSGFFPEERAWFDSFVDLG 215 Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283 + F K S + IDY + + K+L + + Sbjct: 216 FIDTFRYFKPSEAKRYSWWDYRQMARISNRGWRIDYICVSKGLEKYLASADILDQV---- 271 Query: 284 DIKSRGKRLSDHCPISIDYD 303 SDHCP+ D Sbjct: 272 -------EGSDHCPVVATLD 284 >gi|56751512|ref|YP_172213.1| exodeoxyribonuclease III [Synechococcus elongatus PCC 6301] gi|81301416|ref|YP_401624.1| exodeoxyribonuclease III [Synechococcus elongatus PCC 7942] gi|56686471|dbj|BAD79693.1| exodeoxyribonuclease III [Synechococcus elongatus PCC 6301] gi|81170297|gb|ABB58637.1| Exodeoxyribonuclease III [Synechococcus elongatus PCC 7942] Length = 265 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 91/303 (30%), Gaps = 65/303 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N S L+++ + DIV LQE V + Sbjct: 1 MRIATWNVN----------------SVRSRLEHLQRWLTDQTLDIVCLQE---TKVVDEQ 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + +A+ + Q GA G+ Sbjct: 42 FPLEPLQAL-------GYHCAIAGQKSYNGVAILSRQPLADVQ--IGFGAVLGAEAVGDL 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ + ++++++ + L S + Y + L+ ++T + Sbjct: 93 DEQKRVISGRSGDLRIINLYVPNGSELGSEKYDYK------LRWLTCLQQYLTVLGDRES 146 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 I GDFN + D + + + + ++ + Sbjct: 147 QIHICGDFNIALEDRDIYDPAGKETHIMSSPTEREALRQSVLSLGFVDAFRLFEAGADQF 206 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ + ++A I D ++ SDH P+ Sbjct: 207 SWWDYRTGAFRRNRGWRIDHHYLSESAKARAIACHI-------DREPRTWEKPSDHTPVV 259 Query: 300 IDY 302 ++ Sbjct: 260 LEL 262 >gi|312891039|ref|ZP_07750563.1| Endonuclease/exonuclease/phosphatase [Mucilaginibacter paludis DSM 18603] gi|311296506|gb|EFQ73651.1| Endonuclease/exonuclease/phosphatase [Mucilaginibacter paludis DSM 18603] Length = 279 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 77/311 (24%), Gaps = 41/311 (13%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M K L F++ +AQ + + ++N+ + + +LW N T+ Sbjct: 1 MKIKLHLFTALFVLMALQGMAQHLIVGTFNLRFDNPSDTGNLWVNRAPVATA-------L 53 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + DI QE + + S K Sbjct: 54 IRFHQFDIFGTQEGLKNQLNDISNALPEYQRYGLGRDDGKDGGEHSAIFFKKYRFKLLKK 113 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYS 178 P + NR + + +++ KK + + H F + Sbjct: 114 GDFWLSETPDKPGLGWDATCCNRICSWVCLLDKVSKKKFYFFNAH-----FDHQGKIARQ 168 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 S L+ + + + + GD N + N + F Sbjct: 169 ESAKLVLKMIKQIA--------GNEKAIFTGDLNGDHESS----WYQLLASSNYLVDTFA 216 Query: 239 KEKDSRCNANKNLRN------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + K ID+ + GK Sbjct: 217 QAKQPYTFNASFNGFGKELNGNGIIDHIFTTGK---------ADVKRWGILTDSYHGKYP 267 Query: 293 SDHCPISIDYD 303 SDH P+ + + Sbjct: 268 SDHFPVLAEVN 278 >gi|304384008|ref|ZP_07366464.1| endonuclease/exonuclease/phosphatase family protein [Prevotella marshii DSM 16973] gi|304334900|gb|EFM01174.1| endonuclease/exonuclease/phosphatase family protein [Prevotella marshii DSM 16973] Length = 348 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 46/352 (13%), Positives = 100/352 (28%), Gaps = 64/352 (18%) Query: 2 IRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSEQEGVSLWKN-----------S 46 ++K++L L+ CT + AQK + +N L + ++ + Sbjct: 1 MKKHILLLIIVAALCTGATAQKKYAVYAVGFYNQENLFDTCHDEGKRDYEFLPNGSYKWN 60 Query: 47 VKRTTSDYTLLRQYAKNLDADI--------VFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + + + ++ DI + L E+ + + + + + Sbjct: 61 GLKYEHKLRNMARALADMGTDILKNVGCAFIGLSEVENARVLTDLVAQEPLK---NRGMQ 117 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 H + + A+ V + + +P + + S R + + + G+ + Sbjct: 118 FVHIEGPDRRGVDCALLYNPALFTVQKSTLHPYVQEIEKDSAFYTRGFLTVEGTLAGESV 177 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 V+ HL S + + Q + LKD + I GD N Sbjct: 178 AVIVCHLPSRFSTSFYRESGAR-------QMRVLKDSL-LMANPSTKVFIMGDMNDDPTD 229 Query: 218 LGNNDDFWK----TIDPND--SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 ++ + N + + D VM N Sbjct: 230 RSMHEVLGAKEEIALTGNGEMYNPWYNLLAKQGIGTLSYQGSWNLFDQIVMTPNLLDRTG 289 Query: 272 QESFSEILYNEDDIKSRGK-----------------------RLSDHCPISI 300 ++ FS + Y ++ I SDH P+ + Sbjct: 290 KKDFSSLTYWKNRICKFNYLLQTEGKYKGSPKRTTAGGVWLDGFSDHLPVVV 341 >gi|239833024|ref|ZP_04681353.1| exodeoxyribonuclease III (xth) [Ochrobactrum intermedium LMG 3301] gi|239825291|gb|EEQ96859.1| exodeoxyribonuclease III (xth) [Ochrobactrum intermedium LMG 3301] Length = 268 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 81/306 (26%), Gaps = 68/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +WNIN L+ Q+ ++ D++ LQE + Sbjct: 3 FSVATWNIN----------------SVRLRMPLVEQFLRDYQPDVLCLQETKCP---DNL 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + S + +A K + D Sbjct: 44 FPSKGFRAL------GYEHIAISGQKGYHGVATVSKRPLTGVEKIGFCDMGDCRH----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +VE GKK+ + + ++ + D + +P + + ++ + +++ Sbjct: 93 --LSAVVEAGGKKLRIHNFYVPAG--GDEPDPQINPKFAHKLAFLEEMRAIVADRQDGHS 148 Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247 ++ GD N N + ++ K + + + Sbjct: 149 SVLV-GDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRVKGGWSDLMRQLIPADQKI 207 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + R SDH P Sbjct: 208 FTWWSYRAKDWAESDRGRRLDHVWGSGDLEQ-------HIQGLQILRDARGWDRPSDHVP 260 Query: 298 ISIDYD 303 + ++ Sbjct: 261 VIATFN 266 >gi|114707701|ref|ZP_01440596.1| putative exodeoxyribonuclease iii protein [Fulvimarina pelagi HTCC2506] gi|114536945|gb|EAU40074.1| putative exodeoxyribonuclease iii protein [Fulvimarina pelagi HTCC2506] Length = 267 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 32/308 (10%), Positives = 75/308 (24%), Gaps = 72/308 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAV 80 L +WNIN + ++ K D++ LQE + Sbjct: 2 TFSLTTWNIN----------------SVRLRAESVVKFLKMEQPDVLCLQETKCTNEQFP 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 F + + +AV K D+ Sbjct: 46 HAAFEGLGYDHVA-----------LHGQKGYHGVAVLSKLPFEDVVRQDFCEVGDARH-- 92 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + + +++ + I V ++++ + D + +P Q + ++ + + E Sbjct: 93 -----LSVKLKVADRAIRVHNLYVPAG--GDEPDAEVNPKFGHKLQFIEEMRK-MRAEGE 144 Query: 201 SLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSR 244 + V ++ GD N + + Sbjct: 145 AGVSALLCGDLNIAPYESDVWSHKQMLKIVSHTPVETSGLLTAMSEGGWTDLMRRHVPME 204 Query: 245 CNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + +D+ + L + +R SD Sbjct: 205 EKLFTWWSYRAKDWAASNRGRRLDHVWGSADLAARLSDVNV-------LTDARGWERPSD 257 Query: 295 HCPISIDY 302 H P++ + Sbjct: 258 HVPVTASF 265 >gi|21673785|ref|NP_661850.1| hypothetical protein CT0957 [Chlorobium tepidum TLS] gi|21646913|gb|AAM72192.1| hypothetical protein CT0957 [Chlorobium tepidum TLS] Length = 344 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 39/322 (12%), Positives = 82/322 (25%), Gaps = 53/322 (16%) Query: 20 VAQKVRLVSWNINTLSE-------QEGVSLWKNSVKRTTSDY----TLLRQYAKNLD--- 65 Q++ ++ WN+ L + + T + Q + Sbjct: 29 QPQQILVMWWNVENLFDTKNDPKVDDQEFTPMGKAHWTEKKLLLKRLRIAQVFNAIRAER 88 Query: 66 -----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 DIV E + A + I++ + I +A Sbjct: 89 EYGKYPDIVAFAETENRQVFAGTLAALDRATYA-----IDYHESPDPRGIDIGLAWN--- 140 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 ++ + +R G R + ++ H S F T + Sbjct: 141 PATVKFTGSKPYKVRLNNRRGTRFVIAAGFTAASNHFTIVLNHWPSRSFDTQWSETNRIA 200 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK- 239 + + A+ + D + ++ GDFN + D + D + Sbjct: 201 AARV---ARHIVDSLRTCNPQSE-IIVMGDFNDQPENHSVKDVLGSSFDRKAVRHASSRL 256 Query: 240 -----EKDSRCNANKNLRNKIPIDYFVMDQNAYKF----LIQESFSEIL----------- 279 + S + + ID ++ + + SF Sbjct: 257 LYNCWNEASSPGSYFYRNHWEQIDQMLVSAALLDEKGLSIDKTSFRVFSIPAMFDRFGKG 316 Query: 280 -YNEDDIKSRGKRLSDHCPISI 300 Y+ SDH P+ + Sbjct: 317 LYSTYKQGKFKGGYSDHLPLLL 338 >gi|291515515|emb|CBK64725.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301] Length = 290 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 46/326 (14%), Positives = 97/326 (29%), Gaps = 70/326 (21%) Query: 1 MIRKYVLALVFFLVPCTASVA---QKV--------------------RLVSWNINTLSEQ 37 +++KY++ L+ + C A+ + RLV++N+ ++ Sbjct: 4 LMKKYLMTLLMLGLACNAAACMEDEPFYDTEIPPHVSIDNSKGEGVTRLVTYNVGIFNKY 63 Query: 38 EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER 97 DY L+ K +DAD + + E+ + + + Sbjct: 64 ------------IKDDYQLIADMMKEIDADAICMNELDNNTNRTRHVYQLKHFASLMGSW 111 Query: 98 LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 + + V + V + S L A R V + +E Sbjct: 112 DFEYGAAMPYDGGEYGEGVTTRKKAVNKFSVALPKGVG----AEPRVLVVMEME----DY 163 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK-ESLVPFVIAGDFNRKIN 216 + HL S Q + + + ++ +S P + GD N + Sbjct: 164 VICTSHLDH------------VSSEAQLGQVELITKTMKERYGDSGKPVFLGGDMNATPS 211 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 + K + + ++ + IDY + + K + S Sbjct: 212 S-----ETGKLLQKDWEILTIT-----GFGTFPSDNPSKCIDYIMQLKGTPKCEVVGSQI 261 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302 + D+ + SDH P+ +D Sbjct: 262 LRWFKSGDVT----KASDHLPVMLDI 283 >gi|332520200|ref|ZP_08396664.1| Endonuclease/exonuclease/phosphatase [Lacinutrix algicola 5H-3-7-4] gi|332044759|gb|EGI80953.1| Endonuclease/exonuclease/phosphatase [Lacinutrix algicola 5H-3-7-4] Length = 321 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 40/317 (12%), Positives = 79/317 (24%), Gaps = 51/317 (16%) Query: 26 LVSWNINTLSEQEGVSLWKNSVK-----------RTTSDYTLLRQYAKNL-------DAD 67 + +NI L + L ++S R + + N+ Sbjct: 15 IAFYNIENLFDVYDDELTRDSDMTPNSEKKWSIKRYNNKLRKIGYVISNIGKKDVNRHPA 74 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 IV L E+ + + + + + I A+ + +V Sbjct: 75 IVGLAEIENEAVLKDLVNSKHLKAYNYDFVHYDSPDE---RGIDVALLYDESVFKVAYSK 131 Query: 128 YPLLGAKDSFSRAG-NRRAVELLVEINGKKIWVLDIHLKSFCFLD-SLENTYSPSCSLLS 185 L D R + + G ++ VL H S D E + ++ Sbjct: 132 SYTLDLVDDLGVVDLTRDILLVSGLFEGLELHVLVNHWPSRRSGDVETEYKRMKASQKVT 191 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + LK+ K S ++ GDFN + + Sbjct: 192 EIITELKE-----KNSEAKIIVMGDFNDDPSSKSIKSLEL----SHGLFNPMRTLLSRDR 242 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQ-------------------ESFSEILYNEDDIK 286 + + D ++ N ++ + Y K Sbjct: 243 GTTSHNQRWNLFDQVLITHNFFERKKNALRFVNANIFDEDFLKERDSKYKGSPYRTYVGK 302 Query: 287 SRGKRLSDHCPISIDYD 303 SDH P+ + Sbjct: 303 RYKGGYSDHFPVYLILS 319 >gi|313159654|gb|EFR59012.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 250 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 85/308 (27%), Gaps = 62/308 (20%) Query: 1 MIRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 M + + +AL + V+ +S+NI + V D Sbjct: 1 MKQYFSVALAVLFCALMPAACTTQTTAVKFMSYNIRNGRGADDV-----------QDLGR 49 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + + + D+V LQE+ S + + + I + Sbjct: 50 IAEVIGRVAPDVVALQEVDSVTGRMNGRFIPEELGRMTGM-HARFCRAIDYDGGGYGIGL 108 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + + + PL G R R + G + V + L Sbjct: 109 LSRAEPLSVRRIPLPG------REEARVLLMAEF--PGYVVCVTHLSLSP---------E 151 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + + +QA P ++AGDFN DD + + R Sbjct: 152 DQRASLPIIRQATD---------TCRKPVLLAGDFNM--------DDAEEVLGGLGGEFR 194 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + R I IDY + + +S D SDHC Sbjct: 195 PLSDTAQLTFPS--DRPSIRIDYIL------GRGLPQSAKIAERTVD----YTTVASDHC 242 Query: 297 PISIDYDF 304 P+ + + Sbjct: 243 PLWVSLVW 250 >gi|239916752|ref|YP_002956310.1| Exodeoxyribonuclease III [Micrococcus luteus NCTC 2665] gi|281414790|ref|ZP_06246532.1| Exodeoxyribonuclease III [Micrococcus luteus NCTC 2665] gi|239837959|gb|ACS29756.1| Exodeoxyribonuclease III [Micrococcus luteus NCTC 2665] Length = 275 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 29/313 (9%), Positives = 76/313 (24%), Gaps = 73/313 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + + + + D D++ +QE + Sbjct: 1 MKIATWNVNSL----------------RARADRVEAFLERHDIDVLAIQETKCRDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS----YPLLGAKDSFSR 139 + + + +A+ + Q P G + Sbjct: 41 ------NFPWELFERAGYEVVHNGTSQWNGVAIASRVGLSDVQRGFPGQPHFGKGGVDPQ 94 Query: 140 AGNRRA---VELLVEINGKKIWVLDIHLKSFCF-LDSLENTYSPSCSLLSQQAQWLKDWI 195 +R V + + +++ + D +L + A Sbjct: 95 EESRAIGATVGAEAADGVAPVRLWSLYVPNGRGLEDEHMGYKLEWLRVLQEHAAAHLA-- 152 Query: 196 TQKKESLVPFVIAGDFNRKINY-----------------LGNNDDFWKTIDPNDSLIRFP 238 ++ +AGD+N + + + Sbjct: 153 ---EDPDTRLALAGDWNIAPQDEDVWDIELFQREGYTHVSPAERAAFHAFEDAGLVDVVR 209 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + ID+ + + + + +G Sbjct: 210 PRHPGP-GVYTYWDYTGLAFPKKKGMRIDFQLCSPALARTVTDAWIE-------REERKG 261 Query: 290 KRLSDHCPISIDY 302 K SDH P+ ++ Sbjct: 262 KGASDHAPVVVEL 274 >gi|255262040|ref|ZP_05341382.1| exodeoxyribonuclease III [Thalassiobium sp. R2A62] gi|255104375|gb|EET47049.1| exodeoxyribonuclease III [Thalassiobium sp. R2A62] Length = 259 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 82/304 (26%), Gaps = 72/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +++ ++NIN + L + D+ LQE+ N Sbjct: 1 MKIATFNING----------------IKARINALPDWLDEAQPDVAILQEIKSVDENFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++F + + + +A+ K Q +D +R Sbjct: 45 ELFEERGYNV------------ESHGQKSFNGVAMLSKLPLEDVQRGLPGDDEDEQARW- 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E V + + + + ++L + + + Y S + L Sbjct: 92 ----IEATV-VGEQAVRLCGLYLPNGNPVPGPKYEYKLS------WMERLLTRAKDLLAE 140 Query: 202 LVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 +I GDFN + + W+ I F + Sbjct: 141 EQLALITGDFNIIPQAEDAANPQVWREDALFRPESRAAWRRIVNLGYTEAFRARTHGPGH 200 Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+F++ L + D ++ SDH P+ Sbjct: 201 YSFWDYQAGAWNKNDGIRIDHFLLTPQCADLLREC-------KIDAEIRGREKPSDHVPV 253 Query: 299 SIDY 302 ++ Sbjct: 254 WVEL 257 >gi|301105190|ref|XP_002901679.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262100683|gb|EEY58735.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 312 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 89/301 (29%), Gaps = 25/301 (8%) Query: 18 ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN---LDADIVFLQ 72 +QK+ ++++N+ ++S R + L + + D++ LQ Sbjct: 15 TETSQKLLVMTYNVLAQCYVRSTFFPYCESSELRWKNRSKKLEAVFASSLPVSPDVICLQ 74 Query: 73 EMGS-YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 E+ + A + K + + + + ++ K + P Sbjct: 75 EVDNYKEFWAGMMKKLGYEGIFIKKTSTKPDGVAVFWNEK---MLKMKESVQVSLDLPNG 131 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 S G+ A+ + + ++ + F + S + + + Sbjct: 132 DESGEASTRGSVGAI-VHFKHLATQLEFVVATTHLFWDPMQEDVKLLQSRRM----LRAI 186 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGN---------NDDFWKTIDPNDSLIRFPKEKD 242 ++ + + S P V +GDFN + + + + + Sbjct: 187 DEFASALEAST-PVVFSGDFNSLPDSKVYSFITSRNHFKSAYAQYDADGEPKFTNVNGES 245 Query: 243 SRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + R +DY + E S +++ SDH P+ + Sbjct: 246 ITDDGTMVPRFVGTLDYIFYRSPRMRPAALMELMSLEDASKEVALPSTISPSDHLPLLCE 305 Query: 302 Y 302 + Sbjct: 306 F 306 >gi|327278210|ref|XP_003223855.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 2 [Anolis carolinensis] Length = 306 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 33/311 (10%), Positives = 79/311 (25%), Gaps = 73/311 (23%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + + +++ SWN+ +G+ W ++ + DI+ LQE Sbjct: 41 LTSSNGKKYTLKVTSWNV------DGIRAWVKKKG---------VEWVSEENPDILCLQE 85 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 K P + + + + + ++ +A+ K + + G Sbjct: 86 ---TKCAEKQLPADIRDLAEYPH---KYWACSEDKEGYSGVALLSKVKPLEVK----YGI 135 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + R ++ +++ ++ + + L Sbjct: 136 GEEEHDKEGR-----VITAEFPSYFLVTSYVPNAGRGLVRLEYRQSWDVAFRSYLKGLAA 190 Query: 194 WITQKKESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFP 238 P ++ GD N + + + F Sbjct: 191 R--------KPLILCGDLNVAHEEIDLKNPKGNKKNAGFTPEERAGFTKLLEEGFVDTFR 242 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 A +DYFV+ ++ + + Sbjct: 243 HLYPDTAYAYTFWTYMMNARSKNVGWRLDYFVVSKDLQESICDSKIRSTAL--------- 293 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 294 --GSDHCPITL 302 >gi|327278208|ref|XP_003223854.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 1 [Anolis carolinensis] Length = 314 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 33/311 (10%), Positives = 79/311 (25%), Gaps = 73/311 (23%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + + +++ SWN+ +G+ W ++ + DI+ LQE Sbjct: 49 LTSSNGKKYTLKVTSWNV------DGIRAWVKKKG---------VEWVSEENPDILCLQE 93 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 K P + + + + + ++ +A+ K + + G Sbjct: 94 ---TKCAEKQLPADIRDLAEYPH---KYWACSEDKEGYSGVALLSKVKPLEVK----YGI 143 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + R ++ +++ ++ + + L Sbjct: 144 GEEEHDKEGR-----VITAEFPSYFLVTSYVPNAGRGLVRLEYRQSWDVAFRSYLKGLAA 198 Query: 194 WITQKKESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFP 238 P ++ GD N + + + F Sbjct: 199 R--------KPLILCGDLNVAHEEIDLKNPKGNKKNAGFTPEERAGFTKLLEEGFVDTFR 250 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 A +DYFV+ ++ + + Sbjct: 251 HLYPDTAYAYTFWTYMMNARSKNVGWRLDYFVVSKDLQESICDSKIRSTAL--------- 301 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 302 --GSDHCPITL 310 >gi|148273865|ref|YP_001223426.1| putative hydrolase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831795|emb|CAN02765.1| conserved hypothetical protein, putative hydrolase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 281 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 34/281 (12%), Positives = 74/281 (26%), Gaps = 29/281 (10%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A ++ ++++NI L S R L+ + + ++ QE Sbjct: 18 PVDAPELHVMTYNIRRLFR----RYRPGSPDRWADREPLIAELLQREQPALLGTQEAMPT 73 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A R + T +V P + S+ Sbjct: 74 QGRALSHALGRHYRRIGHGRNADGHGEGCPTFYDTRRLELTSWRQVALSDTPAVAGSRSW 133 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R AV + + ++ F + S ++ ++ Sbjct: 134 GNMVPRIAVVADFTDRATGLPLRHVNTH---FDHLSRRSREESARMILGIVAEVQ----- 185 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNANKNLRNK-- 254 VP ++AGD N ++ + + R + +N + Sbjct: 186 -----VPTIVAGDTNAGVDTEPHRLLLEHGALVDAWPAARERLTPEWGTWSNYKAPKRTT 240 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 ID+ ++ + + + G+ SDH Sbjct: 241 RRIDWMLVTPD---------IEVERVGINTTRIGGRAPSDH 272 >gi|194336282|ref|YP_002018076.1| Endonuclease/exonuclease/phosphatase [Pelodictyon phaeoclathratiforme BU-1] gi|194308759|gb|ACF43459.1| Endonuclease/exonuclease/phosphatase [Pelodictyon phaeoclathratiforme BU-1] Length = 342 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 36/349 (10%), Positives = 88/349 (25%), Gaps = 63/349 (18%) Query: 2 IRKYVLALVFFLVPCT---------ASVAQKVRLVSWNINTLSE-------QEGVSLWKN 45 +RK + + F + + V + WN+ L + + + Sbjct: 1 MRKILCYVFLFFCAVSWISQPAAGNPKAGKSVLFLWWNVENLFDTRNDPITNDDDFTPEG 60 Query: 46 SVKRTTSDY----TLLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFY 93 + T +R + D++ E+ + K + Sbjct: 61 KLHWTEKKLILKQMRIRHLLSAVKAHPDYNAYPDLLAFAEVENREVFEKTLSGIPDIGYK 120 Query: 94 STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153 + + I +A + V+ + + + R+ + Sbjct: 121 TI-----YHNSSDPRGIDIGLAFNPQTVQAKASKAYSVASAE----RATRKIIVAEFLSE 171 Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR 213 G ++ H S F + + +++ L + + +I GDFN Sbjct: 172 GHPFHLILNHWPSRSFDTHWTEPKRVAAASVARHI--LDSLL--LSKPKADVIIMGDFND 227 Query: 214 KINYLGNNDDFWKTIDPNDS------LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 + + T D + + ID ++ + Sbjct: 228 EPGNRSLREGLGSTFDAARLKTNGKKFLYNCWSGYEGIGSYSYKNRWQQIDQILLSAGMF 287 Query: 268 KFL----------------IQESFSEILYNEDDIKSRGKRLSDHCPISI 300 L + ++ Y + + SDH P+ + Sbjct: 288 DELGLYAPQNAFRCFSFFRLLDATGNKPYATFEKRKYTGGYSDHLPLLL 336 >gi|95928596|ref|ZP_01311343.1| Endonuclease/exonuclease/phosphatase [Desulfuromonas acetoxidans DSM 684] gi|95135386|gb|EAT17038.1| Endonuclease/exonuclease/phosphatase [Desulfuromonas acetoxidans DSM 684] Length = 230 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 38/285 (13%), Positives = 80/285 (28%), Gaps = 65/285 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-----GSY 77 +RL +WNI+ +G D + + + + L AD++ LQE+ Sbjct: 5 SLRLATWNIHMAVGSDG-----------QRDLSRIIKVIRQLRADVIGLQEVDNQIDNDQ 53 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + ++ + I + A+ + Y L SF Sbjct: 54 DDLHRLATQTGQQIIAGPTMKRSRG--------DYGNALLTSLPVNNVERYDL-----SF 100 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R + + +E + V HL Q + L + Sbjct: 101 KNREPRGLLIVELEWQHSPLHVAVTHLGLRP-------------RERRDQVRRLCTHL-- 145 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 + P V+ GDFN + + P ++ + Sbjct: 146 TAKERTPLVLMGDFNEWFIWGRPLRRLKQHFGP---------IHSPATFPSRWPLL--QL 194 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D+ + + ++ + + + SDH P+ + Sbjct: 195 DHILTEPQ----------KCLVKKDVYRHTSVRYASDHLPLVAEI 229 >gi|296445860|ref|ZP_06887812.1| exodeoxyribonuclease III Xth [Methylosinus trichosporium OB3b] gi|296256688|gb|EFH03763.1| exodeoxyribonuclease III Xth [Methylosinus trichosporium OB3b] Length = 266 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 85/305 (27%), Gaps = 67/305 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN L+ + K D++ LQE NA Sbjct: 1 MKITTWNIN----------------SVRLRIPLVVDFLKQHAPDVLCLQETKCRNA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ K+ L D+ Sbjct: 41 -----EFPYADFRAIGYEHFAINGQKGYHGVAIVSKHPLELLDIRDFCETGDARH----- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + + G I + + ++ + D + T +P + +K+W+T+++ + Sbjct: 91 --VSVGLPNGGTPITIHNFYVPAG--GDEPDVTINPKFAHKLGFLDEMKEWVTRERITDG 146 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 V+ GD N + D + + + Sbjct: 147 RVVLVGDLNIAPLEQDVWSHKALLQTVSHTPVEVQKLGAVFDAGRWIDAMRRFVPEQEKL 206 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ Q S + N +R SDH P Sbjct: 207 YTWWSYRASDWTKSDRGRRLDHVWTSQAL-------STELLEMNVLREARSWQRPSDHVP 259 Query: 298 ISIDY 302 +++ Sbjct: 260 VTVAL 264 >gi|170692673|ref|ZP_02883835.1| exodeoxyribonuclease III Xth [Burkholderia graminis C4D1M] gi|170142329|gb|EDT10495.1| exodeoxyribonuclease III Xth [Burkholderia graminis C4D1M] Length = 268 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 83/304 (27%), Gaps = 70/304 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+ ++NIN S T L Q+ + DIV LQE+ A Sbjct: 3 TLRIATFNING----------------IRSRQTALLQWLEREAPDIVCLQEL---KAADS 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP + R + +A+ K L+ L G + Sbjct: 44 AFPAD-------AVRDAGYHAIWHGQSAWNGVAILSKGEAPLESRRGLPGFEADTHSRYL 96 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 AV + V ++L + + Y + L D +S Sbjct: 97 EVAV--------DGLLVCCLYLPNGNPQPGPKFEYK------LKWFDHLIDHAANLLKSG 142 Query: 203 VPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCN 246 P V+AGDFN + + + + + D R Sbjct: 143 HPVVLAGDFNVVPTDEDIYNPRSWLKDALLQPESRERYRRLLAQGWTDSLRTHFGDERVY 202 Query: 247 ANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID+ ++ + L D SDH P Sbjct: 203 TFWDYFRRHWDTNSGLRIDHILLSPDLAPRLRDAGV-------DRWVRGEPHASDHAPTW 255 Query: 300 IDYD 303 ++ D Sbjct: 256 VELD 259 >gi|170782964|ref|YP_001711298.1| hypothetical protein CMS_2654 [Clavibacter michiganensis subsp. sepedonicus] gi|169157534|emb|CAQ02728.1| conserved hypothetical protein [Clavibacter michiganensis subsp. sepedonicus] Length = 281 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 34/281 (12%), Positives = 73/281 (25%), Gaps = 29/281 (10%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A ++ ++++NI L S R L+ + + ++ QE Sbjct: 18 PVDAPELHVMTYNIRRLFR----RYRPGSPDRWADREPLIAELLQREQPALLGTQEAMPT 73 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A R + T +V P + ++ Sbjct: 74 QGRALSHALGRHYRRIGHGRNADGHGEGCPTFYDTRRLELTTWRQVALSDTPAVAGSRTW 133 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R AV + + ++ F + S ++ ++ Sbjct: 134 GNMVPRIAVVADFTDRATGLPLRHVNTH---FDHLSRRSREESARMILGIVAEVEA---- 186 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWK-TIDPNDSLIRFPKEKDSRCNANKNLRNK-- 254 P ++AGD N IN + + R + +N + Sbjct: 187 ------PTIVAGDTNAGINTEPHRLLIGSGALVDAWPAARERLTPEWGTWSNYKAPKRTT 240 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 ID+ ++ + + + G+ SDH Sbjct: 241 RRIDWMLVTPD---------VEVERVGINTTRIDGRAPSDH 272 >gi|260557567|ref|ZP_05829782.1| nuclease [Acinetobacter baumannii ATCC 19606] gi|260409193|gb|EEX02496.1| nuclease [Acinetobacter baumannii ATCC 19606] Length = 812 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 97/325 (29%), Gaps = 50/325 (15%) Query: 21 AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSY 77 A +R+ S+N+ N + G + + + D + K++DAD+ L E+ + Sbjct: 461 ANHIRVASFNVLNYDNGATGFPTERGANTQAEFDKQHRKIVSALKSIDADVYGLMEIANN 520 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + R N+ I AI K V+ L ++ L Sbjct: 521 GYGPNSAIAHLTSALGPDWKYVIPENLDRLGNDVIAVAIIYNSKRVKPLNKAVVLDLGD- 579 Query: 136 SFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPS--------CSLLS 185 NR + + K V+ HLKS N+ Sbjct: 580 -----KNRTTLAQTFQAVRGNKTFTVIPNHLKSKGCSGVDANSSDADQNDGQGCWNPTRV 634 Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + + W+ + ++ GD N ++ + L + + Sbjct: 635 KAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAPI--LAFEKANYKVLLNDAKVGQGA 692 Query: 244 RCNANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289 + + +D+ + D + Y +++ I +E + Sbjct: 693 QAYSYVFGVASDANGNGGAGNLDHAIADADLYPKVVRTFAWHINADEPTVLDYNEEYKTD 752 Query: 290 -----------KRLSDHCPISIDYD 303 R SDH P+ +D D Sbjct: 753 EQKALFYGEDAYRSSDHDPVIVDLD 777 >gi|229089031|ref|ZP_04220388.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44] gi|228694283|gb|EEL47902.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44] Length = 353 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 48/322 (14%), Positives = 109/322 (33%), Gaps = 64/322 (19%) Query: 21 AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++ + ++NI G +S ++T + + + + D+D + +Q Sbjct: 53 GEEFKATTFNIGYGGLDKDQDFFLDGGTGSRSSSKEQTEKNIGNMVSFLQKEDSDFILVQ 112 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-------------KK 119 EM + + F N + F + + + N + ++ K Sbjct: 113 EMDEKSL--RSFDVNEYKAFQDGLKGFASTFGYNFNAQWVPVPIKKPHGYTKSGLGSFSK 170 Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENT 176 Y L G + + R VE + + NGK + ++++HL ++ S Sbjct: 171 YKVEEVTRYQLPGREMWLRQLFELDRAIVEHKIPVDNGKYLRMVNVHLSAYDKGGS---- 226 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + QQ ++LK+++ + ++ V+ GD+N+ ++ + D +K P + Sbjct: 227 ------IRKQQVEFLKEYMNKHYKNGDYIVLGGDWNQLLSDVQLQDPKFKEEWPEWLVQL 280 Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280 D + ID F++ N ++ ++ + Sbjct: 281 PEDFTDGGFQWAVDDSVWTVRDNVKSYVEGENFVTIIDGFLVSPN--VEIVSVQGHDLKF 338 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 SDH P+S Sbjct: 339 EN----------SDHNPVSTVL 350 >gi|170050812|ref|XP_001861479.1| nocturnin [Culex quinquefasciatus] gi|167872281|gb|EDS35664.1| nocturnin [Culex quinquefasciatus] Length = 454 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 53/355 (14%), Positives = 96/355 (27%), Gaps = 67/355 (18%) Query: 6 VLALVFFLVPCTASVAQK--VRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQY 60 +L L C+ +R+ WN+ TL +G L Q Sbjct: 106 MLKLDAISKNCSEPTTNPAQLRIFQWNMLSQTLGMHNDGFVRCPVDALTWDCRRYQLIQE 165 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKK 119 D DIV LQE+ + + K+ + + + D+N A+ +K Sbjct: 166 IVQNDPDIVCLQEVDHFKFLQKILATQNYEGVFFPKPDSPCLYINDNNGPDGCAVFYKKD 225 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 + +L +L S A+ + N +++ V HLK+ + Sbjct: 226 RLELLNHFTRVLEVWRVQSNQVAIAALFRTRDTN-QELCVTTTHLKA--------RKGAL 276 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------------------- 220 L ++Q + L ++ P ++ GDFN + Sbjct: 277 LSKLRNEQGKDLLGFVDAVA-EKRPVILCGDFNAEPIEPIYSTVLNYKPLGLTSAYSDLL 335 Query: 221 ----------------------------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 +DD +I +R Sbjct: 336 AEEGDPSLMIKDLKSLQPQSSISSAHSVDDDCASSISAGGRTKAEQSASCEPSYTTWKIR 395 Query: 253 N----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY ++ F D + SDH + D++ Sbjct: 396 EEGEVCHTIDYVFYSKDQITVKNCLMFPTGEEISPDRTPSYQYPSDHFSLVCDFE 450 >gi|315122848|ref|YP_004063337.1| exodeoxyribonuclease III protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496250|gb|ADR52849.1| exodeoxyribonuclease III protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 265 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 87/303 (28%), Gaps = 67/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 V + +WN+N + + + + DIV LQE + + Sbjct: 4 VTIATWNVN----------------SIRVRIKNVITWIQENNPDIVCLQETKTED----- 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +N+ + +A+ K + D +R Sbjct: 43 -----KTFPFEAIQSLNYHIETCGQKSYNGVAILSKYQPIEMIKKLPGDDLDEQARF--- 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E IN + + + +I+L + + S + Y S + + +Q+ E Sbjct: 95 --IEATFTINSQILRIGNIYLPNGNPIASTKYDYKIS------WIKRFLQFASQRLELEE 146 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNANK 249 + AGD+N +D D N + + + Sbjct: 147 ALIFAGDYNIVPQPRDCHDSIMLQNDACFTLEVRQAFQKLQNMGFTDAIRATNDAHHIYS 206 Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A FL D + SDH P+ + Sbjct: 207 FWDYFSDSWRKNKGMRIDHVMLSPEATTFLHSAYI-------DKKPRGCVKPSDHTPVIV 259 Query: 301 DYD 303 D Sbjct: 260 ALD 262 >gi|269218782|ref|ZP_06162636.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 848 str. F0332] gi|269211893|gb|EEZ78233.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 848 str. F0332] Length = 265 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 39/306 (12%), Positives = 80/306 (26%), Gaps = 68/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ + N+N + + + ++ + AD++ LQE+ + + Sbjct: 1 MRIATCNVNGIRA---------------AARKGMGEWIASAKADVLLLQEVRAPEELVAP 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + A+AVR+ + Sbjct: 46 LVGEGYKTIPWPCEIKGRAG--------VAVAVREGIETGAVVR------GVGDDQPPVD 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 L VE+ + V+ +L S + ++ + + E Sbjct: 92 TGRWLEVELPELGLRVVSAYLHSGDS------SSKEKMDAKYAHLDLVEKRLAELSEGGG 145 Query: 204 PFVIAGDFNRKINYLGNNDD-----------------FWKTIDPNDSLIRFPKEKDSRCN 246 F++AGDFN L + + + Sbjct: 146 RFLVAGDFNIVHTPLDITNWKSNHNRTSGVLDEEIAYLDRWFGQMGLADVQRRLDPDSQG 205 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDY + + + Y D S R SDH P Sbjct: 206 PYTWWSQRGKAFDNNTGWRIDYHLASPSLAEKADA-------YRIDRAPSYDARFSDHAP 258 Query: 298 ISIDYD 303 + +DY Sbjct: 259 LIVDYT 264 >gi|260430974|ref|ZP_05784945.1| endonuclease/exonuclease/phosphatase family protein [Silicibacter lacuscaerulensis ITI-1157] gi|260414802|gb|EEX08061.1| endonuclease/exonuclease/phosphatase family protein [Silicibacter lacuscaerulensis ITI-1157] Length = 337 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 94/337 (27%), Gaps = 58/337 (17%) Query: 24 VRLVSWNINTLSE----QEGVSLWKNSVKRT----TSDYTLLRQYAKNLDADIVFLQEMG 75 +RL ++NI + + + + + R + +DAD + + E Sbjct: 1 MRLATYNIEWFANLFDRDDKLIVDDSWSGRRNVTKAQQVEAIATVLTAIDADAILIVEAP 60 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG-AK 134 + R N N+ H +AV R+ + P+ Sbjct: 61 NTGKSQNTVRALQEFAETFELRTTNAIMGF-ANETHQELAVLYDPARLRVRHDPIGDRET 119 Query: 135 DSFSRAGNRRAVELLVEIN-----------------------GKKIWVLDIHLKSFCFLD 171 D F+ R E ++++ G + ++ HLKS Sbjct: 120 DGFAGDAPRFDGEFRIDLDIDATEDIVRFSKPPLELAAESSDGFQFRMIGAHLKSKAPHG 179 Query: 172 SLENT-----YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 + + QA WL + ++ P V+ GD N + F + Sbjct: 180 AESRDALIRISIANRRKQLAQAVWLSHRVKAHLDAGEPVVLLGDLNDGPGLDEFENLFGR 239 Query: 227 ----TIDPNDSLIRFPKEK--DSRCNANKNLRNKIP---------IDYFVMDQNAYKFLI 271 + + R P +DY ++ + Sbjct: 240 SSVEILLQTGLYDPHAAQACRRRPGWIPSTARFPRPEEGQYLEALLDYIMISPDLRARRP 299 Query: 272 QESFSE-----ILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ +++ SDH P+++D D Sbjct: 300 AWRIWHPFRDEHCWSVPELRDALVTASDHFPVTLDID 336 >gi|209520714|ref|ZP_03269463.1| exodeoxyribonuclease III Xth [Burkholderia sp. H160] gi|209498839|gb|EDZ98945.1| exodeoxyribonuclease III Xth [Burkholderia sp. H160] Length = 258 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 28/302 (9%), Positives = 83/302 (27%), Gaps = 68/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + + + D++ LQE Sbjct: 1 MKIATWNVNSL----------------KVRQQHVIDWLASSGTDVLCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + I + + + + + + + +S + F R Sbjct: 35 LKLPDEKFPRAELEAIGYRSWYAGQKTYNGVGILVREGLNVDESSIVRNIP-GFEDQQQR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + ++ + + + + Y + L DW++ + Sbjct: 94 VIAATV-----EGVRIISAYFPNGQAPGTDKFAYK------LRWLDALHDWLSTETTLHP 142 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANK 249 + GD+N +D + + + L+ ++ + Sbjct: 143 KLALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAAFVRLIALGLLDAFRQFEQPEKIYS 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ + + D + + + SDH P+ Sbjct: 203 WWDYRMMAFRRNAGLRIDHILLSKALSDICTAC-------DVDKVPRKWDQPSDHAPVFA 255 Query: 301 DY 302 Sbjct: 256 QL 257 >gi|297195088|ref|ZP_06912486.1| large secreted protein [Streptomyces pristinaespiralis ATCC 25486] gi|197721523|gb|EDY65431.1| large secreted protein [Streptomyces pristinaespiralis ATCC 25486] Length = 615 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 36/334 (10%), Positives = 83/334 (24%), Gaps = 69/334 (20%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQ 72 ++ + ++N+ L + + L + DI+ L+ Sbjct: 303 STRPQRNGELAVATYNVENLDPSDP-----------QEKFDALAKAVVENLASPDILALE 351 Query: 73 EMGSYNAVAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 E+ V + S + + N +I Sbjct: 352 EIQDDTGAKNDGTVSAAQTVKKFTDAIVAAGGPAYEWRSVDPVNNEDGGQPGGNIRQVFL 411 Query: 116 VRKKNVRVLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEING 154 + V ++ P + + +R+ + G Sbjct: 412 FNPERVSFNDRAGGDATTATGVVRERGRAALTLSPGRIDPANDAWEDSRKPLAGEFTFRG 471 Query: 155 KKIWVLDIHLKSFCFLDS----LENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIA 208 + ++V+ H S +S + S + +QAQ + ++ + V+ Sbjct: 472 RTVFVIANHFGSKGGDESLVSHHQPPVRSSEAQRLKQAQAVNAFVKDVLDADHKADVVVL 531 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 GD N D S + N +D + + Sbjct: 532 GDINDFEFSETTK----ALTDGGALFPAIKSLPRSERYSYVYQGNSQVLDQILTSPSIRD 587 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 F +++ + SDH P + + Sbjct: 588 FSYDSVHINAEFSDQN--------SDHDPQVLRF 613 >gi|220923190|ref|YP_002498492.1| exodeoxyribonuclease III Xth [Methylobacterium nodulans ORS 2060] gi|219947797|gb|ACL58189.1| exodeoxyribonuclease III Xth [Methylobacterium nodulans ORS 2060] Length = 263 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 91/304 (29%), Gaps = 67/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N L + K D+V LQE+ V + Sbjct: 1 MRITTWNVN----------------SVKQRLGHLLAFLKEASPDVVCLQEL---KCVDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + +A+ + L+ L +A Sbjct: 42 FPR-------TEIEEAGYVVATHGQKAFNGVALLTRQPLPLRDVRRGLPGDPEDGQARY- 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E ++ + V I+L + + + + Y + L +E Sbjct: 94 --IEAVIPTATATLRVASIYLPNGNPIGTPKYDYKLAFLRR------LLLHARALREKEE 145 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+AGD+N +L + ++ + N+ + D R Sbjct: 146 VLVLAGDYNVIPEPIDVANPEAWTGDALFLPESRAAFRML-LNEGFTDALRACDERPGLY 204 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ A L+ S + + SDH P++ Sbjct: 205 TFWDYQAGAWSRNLGIRIDHLLLSPQALDRLVSASVQKH-------LRGLDKPSDHVPVT 257 Query: 300 IDYD 303 ++ D Sbjct: 258 VELD 261 >gi|114707796|ref|ZP_01440690.1| hypothetical protein FP2506_17604 [Fulvimarina pelagi HTCC2506] gi|114536785|gb|EAU39915.1| hypothetical protein FP2506_17604 [Fulvimarina pelagi HTCC2506] Length = 244 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 86/280 (30%), Gaps = 42/280 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R V++NI++ + D + +L AD+V LQE+ A + Sbjct: 1 MRFVTYNIHSCLGTDR-----------RRDPDRIGAVISDLRADVVALQEVDVGRARSGF 49 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 I T IA ++ L ++ L G + ++ R Sbjct: 50 VD-QAQRIAEKTGLHHYFFAPVEECGERYGIAFLTRSAATLMKAALLPGLQ-TYPNLEPR 107 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A+ + +E + V++ HL QA L + Sbjct: 108 GALLVQLESEAGVMNVVNTHLGLRS-------------RERLTQAAALLAS-EWLADLSA 153 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 PFV+ GDFN ++ + ++D + + + +D+ Sbjct: 154 PFVLLGDFNA-VSGSKAHSLLTASLDDARRF----GGRSGLRPTFPSRFPILALDHCFFR 208 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +R SDH P+ ID+D Sbjct: 209 GDLKVRSAYV----------VRSPLVRRASDHLPLVIDFD 238 >gi|270159292|ref|ZP_06187948.1| exodeoxyribonuclease III [Legionella longbeachae D-4968] gi|289165884|ref|YP_003456022.1| exodeoxyribonuclease III XthA [Legionella longbeachae NSW150] gi|269987631|gb|EEZ93886.1| exodeoxyribonuclease III [Legionella longbeachae D-4968] gi|288859057|emb|CBJ12986.1| putative exodeoxyribonuclease III XthA [Legionella longbeachae NSW150] Length = 259 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 85/303 (28%), Gaps = 72/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L SWN+N+L + + + DI+ +QE K+ Sbjct: 2 IKLASWNVNSL----------------KVRLEQVISWLDSSHVDILAIQE-------TKL 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 N + + S + +A+ + + + R Sbjct: 39 IDDNFPRAVF---EEKGYHVVFSGQKTYNGVAIISRYP------FSDVLTDIPDLDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + V ++++++ + L S + Y Q + ++I Q+ Sbjct: 90 RILIVTV----AGFRLINLYVPNGSELTSDKYQYKLD------WLQKVTNFIQQQINIYS 139 Query: 204 PFVIAGDFNRKINYLGNNDDFW-------KTIDPNDSLIRFPKEKDSRCN-------ANK 249 + GDFN +D + N + + Sbjct: 140 KIAVVGDFNIAPEDRDVHDPIAWEGSVLVSPAERNAFVQLLQLGFHDSFRNFVQEDQSFS 199 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ + Q D + +R SDH P+ + Sbjct: 200 WWDYRAAAFRRNRGLRIDHILLSKELNHLCTQSVI-------DKEPRKVERPSDHAPVWV 252 Query: 301 DYD 303 + Sbjct: 253 ALE 255 >gi|264677073|ref|YP_003276979.1| endonuclease/exonuclease/phosphatase [Comamonas testosteroni CNB-2] gi|262207585|gb|ACY31683.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni CNB-2] Length = 307 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 41/317 (12%), Positives = 90/317 (28%), Gaps = 61/317 (19%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM------- 74 K+ +++WN+ +G+ SV+R + + ++ D++ +QE+ Sbjct: 15 DKMNILTWNVQWCCGMDGLV----SVERIVRHALQMGE--QSGGLDVLCMQEIAVNYPDL 68 Query: 75 -----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 + + P S + + + +L Q Y Sbjct: 69 QGRPGDQLAELKALLPGWQIFFGASVDEFTPRGH------QRFGNLIATRLPVLLVQHYL 122 Query: 130 LLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 L ++ R R + V+ + ++ HL+ F + + + L QA Sbjct: 123 LPMPAEADMRCMQRMCSVVTVDDAALGPVRIMTTHLEYFSARQRM--AQAGALRALQMQA 180 Query: 189 QWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDS------ 233 L D Q P+ V+ GDFN + + + + Sbjct: 181 CALADAPPQPASDGSPYQTKPHTRHAVLCGDFNFEPHEPEYAVLSAPWVAGEEGCLQAGQ 240 Query: 234 -----LIRFPKEKDSRCNA---NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + +P + D + + + + S Sbjct: 241 WRNSWDVLYPGQPQPPTFRLVDRTWGAEPGACDLIWVSDSLCQRVHTWSV---------- 290 Query: 286 KSRGKRLSDHCPISIDY 302 + SDH P+ + Sbjct: 291 -DSATQASDHQPVMLTL 306 >gi|46908012|ref|YP_014401.1| exodeoxyribonuclease [Listeria monocytogenes serotype 4b str. F2365] gi|47094151|ref|ZP_00231871.1| exodeoxyribonuclease [Listeria monocytogenes str. 4b H7858] gi|217964070|ref|YP_002349748.1| exodeoxyribonuclease III [Listeria monocytogenes HCC23] gi|226224385|ref|YP_002758492.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes Clip81459] gi|254826392|ref|ZP_05231393.1| exodeoxyribonuclease [Listeria monocytogenes FSL J1-194] gi|254933631|ref|ZP_05266990.1| exodeoxyribonuclease [Listeria monocytogenes HPB2262] gi|255521086|ref|ZP_05388323.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes FSL J1-175] gi|300766428|ref|ZP_07076383.1| exodeoxyribonuclease [Listeria monocytogenes FSL N1-017] gi|46881282|gb|AAT04578.1| exodeoxyribonuclease [Listeria monocytogenes serotype 4b str. F2365] gi|47017476|gb|EAL08289.1| exodeoxyribonuclease [Listeria monocytogenes str. 4b H7858] gi|217333340|gb|ACK39134.1| exodeoxyribonuclease III [Listeria monocytogenes HCC23] gi|225876847|emb|CAS05556.1| Putative 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293585194|gb|EFF97226.1| exodeoxyribonuclease [Listeria monocytogenes HPB2262] gi|293595632|gb|EFG03393.1| exodeoxyribonuclease [Listeria monocytogenes FSL J1-194] gi|300512852|gb|EFK39944.1| exodeoxyribonuclease [Listeria monocytogenes FSL N1-017] gi|307571362|emb|CAR84541.1| exodeoxyribonuclease [Listeria monocytogenes L99] gi|328466425|gb|EGF37573.1| exodeoxyribonuclease III [Listeria monocytogenes 1816] gi|332312222|gb|EGJ25317.1| Exodeoxyribonuclease III [Listeria monocytogenes str. Scott A] Length = 251 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 84/304 (27%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L +Y + +DADI LQE Sbjct: 1 MKLISWNVNGLRAAVKKGF---------------LEYFEEVDADIFCLQETKLQEG-QIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + Q + D+ R Sbjct: 45 LDLPAYKDYWN----------YAVKKGYSGTAIFTKVEPLSVQYGLGVPEHDTEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++ +++ ++ + + +++ + Sbjct: 91 -----VITLEFEEFFMVTVYTPN-------SQAELKRLDYRMTFEDAILEYVK-NLDKTK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + F +A Sbjct: 138 PVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + L+ + SDHCP+ Sbjct: 198 SWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVL-----------GSDHCPVE 246 Query: 300 IDYD 303 ++ + Sbjct: 247 LELN 250 >gi|318056396|ref|ZP_07975119.1| large secreted protein [Streptomyces sp. SA3_actG] gi|318075703|ref|ZP_07983035.1| large secreted protein [Streptomyces sp. SA3_actF] Length = 612 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 36/329 (10%), Positives = 77/329 (23%), Gaps = 69/329 (20%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQ 72 ++ + ++N+ L + + L DIV ++ Sbjct: 300 SAKPGADDELSVATYNVENLDPTDP-----------QEKFDALADGVVTHLASPDIVSIE 348 Query: 73 EMGSYNAVAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 E+ N V + + + + +I Sbjct: 349 EVQDDNGAKDDGTVSAEQTLKKFTDAIVAAGGPRYAWRGIDPENDKDGGEPGGNIRQVFL 408 Query: 116 VRKKNVRVLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEING 154 V ++ P + + +R+ + G Sbjct: 409 YNPDRVSFTDRAGGDATTATAVVERDGAPALAASPGRVDPANPAWQDSRKPLAGEFVFRG 468 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIA 208 + ++V+ H S L P S + QA + ++ Q + V+ Sbjct: 469 ETVFVVANHFNSKGGDQPLTAAQQPPVRGSETQRHAQAASVNAFVRQLTALDKKARVVVL 528 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 GD N D N + N +D ++ + Sbjct: 529 GDLNDFEFS----DTTKTLTKGNVLRSGITQLPADERYTYVYQGNSQVLDQILVSKGVKS 584 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCP 297 F + + + SDH P Sbjct: 585 FTYDSVHINAEFAQQN--------SDHDP 605 >gi|300123561|emb|CBK24833.2| unnamed protein product [Blastocystis hominis] Length = 491 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 76/315 (24%), Gaps = 48/315 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK- 82 +R+VS+N + L+ + D DI+ LQE+ + Sbjct: 186 LRIVSYNAWNTMPASWFITGERRFDWFYKRMQLMAANLRAADPDIIVLQEIRYDETLGDQ 245 Query: 83 -----VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + Y + + + + +AV K Q L Sbjct: 246 RRRFQLRHLTELLPDYQYIFQPANMYNEHGSRVEEGVAVLSKFPIRRQDYILLSRDYTDK 305 Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R + + + I V HL S S + + + L D+I Sbjct: 306 QDDHQRLVLHAQIAVPSIGTIHVYGTHL-------------SLSEAARDRTVRELSDFID 352 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR---------------FPKEK 241 + V GD N + + K + Sbjct: 353 -WNGANEFSVFCGDLNAEPDSAAIRYLIGKGELGGKRTNYKDAFLQVHPEPKPRSPSEGA 411 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK----------- 290 ++ IDY + Q + + + I Sbjct: 412 RAKALTFPTDNPVKRIDYIIYKQGSGVHVRVDDSQLIGLKPWSGTETDDLKAGMMSKDSA 471 Query: 291 -RLSDHCPISIDYDF 304 SDH + D+ F Sbjct: 472 LWPSDHRGVYADFTF 486 >gi|121602003|ref|YP_988961.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583] gi|121602536|ref|YP_988991.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583] gi|120614180|gb|ABM44781.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583] gi|120614713|gb|ABM45314.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583] Length = 263 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 90/303 (29%), Gaps = 66/303 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WNI + + L ++ + DIV LQE + + Sbjct: 1 MRIATWNIAG----------------IKARHETLCKWLQQNQPDIVCLQE---TKTIDEN 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP++ T + + +A+ K ++ D +R Sbjct: 42 FPRD-------TIESLGYHIETHGQKKFNGVAILSKKRPDEIITHLPGNNNDEQARY--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + N I + ++L + ++S + Y + + L Sbjct: 92 --IEAVYSTNKGAIRIASVYLPNGNPINSEKYLYK------MEWMERLYTHAKSLLTYEE 143 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++AGD+N ++ I + + Sbjct: 144 PLILAGDYNVIPTLSDAKNPQEWKHDALFLLQTRQAFQRIIHLGFYDALRSVTEDPSFSF 203 Query: 249 KNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 N N I ID+F++ A L I K SDH P+ I+ Sbjct: 204 WNFQAGAWFKNNGIRIDHFLLSSEAIDQL-------ICAYSQTEVRGYKNPSDHTPVWIE 256 Query: 302 YDF 304 D+ Sbjct: 257 LDY 259 >gi|71083659|ref|YP_266379.1| exodeoxyribonuclease III [Candidatus Pelagibacter ubique HTCC1062] gi|71062772|gb|AAZ21775.1| exodeoxyribonuclease III [Candidatus Pelagibacter ubique HTCC1062] Length = 258 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 37/300 (12%), Positives = 91/300 (30%), Gaps = 68/300 (22%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + SWN+N + +++Y + D+V +QE+ + + Sbjct: 3 ITSWNVN----------------SVRARIENIKEYLQKFSPDVVMMQEIKTQDE------ 40 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 Y +++ + +A+ K+ ++ L+ K SR Sbjct: 41 ----TFPYDDFSALDYESHVFGQKSYNGVAIISKH-KLENVKIDLIKDKLKQSR-----I 90 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + ++ K I +++I+ + +D+ + TY + L + + Sbjct: 91 ISAELKHKKKNIQLINIYTPNGNPVDTDKYTYKKN------WLDKLIKQLKTLSKKNENI 144 Query: 206 VIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 ++AGDFN + ++ + + + Sbjct: 145 ILAGDFNILPSAEDAYNIKGFEDDALYRLEIRKKFREMINLGFHDAYRHIHGEKEGYTYW 204 Query: 251 LRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+F++ + + + + + SDH PI I+ Sbjct: 205 DYMRGAWQKNNGLRIDHFLVSNSLLNIVKNVNI-------NKDPRGKGKPSDHTPIEIEL 257 >gi|325845943|ref|ZP_08169141.1| endonuclease/exonuclease/phosphatase family protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481849|gb|EGC84881.1| endonuclease/exonuclease/phosphatase family protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 348 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 101/321 (31%), Gaps = 60/321 (18%) Query: 18 ASVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 + + R+++WNI G ++ + + +KN++ADI Sbjct: 49 PEIGKNYRVMTWNIGYGGLDKDTDFFMDGGQMVFPINKNHVEKSIDHIISTSKNINADIK 108 Query: 70 FLQEMG-------SYNAVAKVFPKN--------TWCIFYSTERLINHSKRDSNNDIHTAI 114 QE+ N V K+ + + + K S + Sbjct: 109 LFQEVDYDSKRSFHINQVEKLRENLLGSSTFALNFKTDFIPYPIPPMGKVQSGIMTQSDF 168 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++K + + + RA N + ++ + KK+ ++++HL ++ + Sbjct: 169 EIKKSKRYQQEIPHKFPTRLVNLKRAFN--PSYIDIKNSDKKLVIVNVHLDAYESGNKG- 225 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN-------------YLGNN 221 Q + + D++ ++ + ++ GDFN++++ Sbjct: 226 ---------RVAQTKEIIDFVNKEYKKGNYVLVGGDFNQELSGKYKKLPEGIWNPSPFPK 276 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + K I + + K ID F+ N I+ Sbjct: 277 EMLTKNIKLYYDKNGKTSVVNDKPYTGK-DAYLSTIDGFLATDNIKIKTIKTQAK----- 330 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 + SDH P+ +++ Sbjct: 331 ------ENFQYSDHNPVVMEF 345 >gi|258542179|ref|YP_003187612.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01] gi|256633257|dbj|BAH99232.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01] gi|256636316|dbj|BAI02285.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-03] gi|256639369|dbj|BAI05331.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-07] gi|256642425|dbj|BAI08380.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-22] gi|256645480|dbj|BAI11428.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-26] gi|256648533|dbj|BAI14474.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-32] gi|256651586|dbj|BAI17520.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654577|dbj|BAI20504.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-12] Length = 270 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 86/308 (27%), Gaps = 67/308 (21%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +++RLV+WNIN+L LL + ++L D+V LQE Sbjct: 2 PRRMRLVTWNINSL----------------RLRLPLLEKLVRHLAPDVVCLQE---TKVP 42 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +FP++ + +A+ ++ P+ K+ Sbjct: 43 DPLFPEDGVKALGFEHL------HYRGMKGYNGVAILSRHPLKPVTQTPVWYGKEDCRH- 95 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 V V + + D ++ + D +P + + + +W + Sbjct: 96 -----VAATVCAPEGDVELHDFYIPAG--GDEPAPETNPKFAHKLAFVEEVTEWFQSRPL 148 Query: 201 SLVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + V+ GDFN ++ + + + Sbjct: 149 NRT--VLVGDFNIAPLEHDVWSHKQLLKIVSHTPPETERLNRWLQTGFVDAMRHFVPADE 206 Query: 246 NANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ M + L + + SDH Sbjct: 207 KLYTWWSYRNRDWKKSNRGRRLDHVWMTPDLLPNLHGMTVV-------REARDWESPSDH 259 Query: 296 CPISIDYD 303 P+ +D+ Sbjct: 260 VPVVVDFS 267 >gi|86357361|ref|YP_469253.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42] gi|86281463|gb|ABC90526.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42] Length = 260 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 75/303 (24%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N ++ T + ++ K D+ LQE+ + +A Sbjct: 1 MKIATYNVNGING----------------RLTNVLRWLKEDGPDVACLQELKTDDA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +A+ K + L G D +R Sbjct: 41 ------RFPRKELERAGYGAVWHGQRSWNGVAILAKGKTPILTRRGLPGDPDDTH---SR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + F + LS A L + V Sbjct: 92 YIEAAV----DGMLIGCLYLPNGNPFPGAKFEYKLRWFRRLSAYAAELLEI-------EV 140 Query: 204 PFVIAGDFNRKINY---LGNNDDFWKTIDPND-----------SLIRFPKEKDSRCNANK 249 P ++AGDFN + + + Sbjct: 141 PSILAGDFNVMPTEIDVYKPERWQDDALFRPEVRTAYAQLVAQGWTDAVRHLHPGERIYT 200 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ +L S ++ SDH P+ I Sbjct: 201 FWKYWRNSFERDAGLRIDHLLLSPTVAPWLRSASVR-------RKPRGWEQTSDHAPVMI 253 Query: 301 DYD 303 + + Sbjct: 254 ELE 256 >gi|302537936|ref|ZP_07290278.1| sphingomyelin phosphodiesterase [Streptomyces sp. C] gi|302446831|gb|EFL18647.1| sphingomyelin phosphodiesterase [Streptomyces sp. C] Length = 329 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 89/301 (29%), Gaps = 31/301 (10%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 S ++ ++++N+ +S+ L+ N + + + + D+V LQE Sbjct: 38 SATPRLSVLTYNVFLMSKS----LYPNWGQDHRAAEIPRASFFQGH--DVVVLQEAFDNG 91 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPL 130 A + + Y T + + + K + ++ Sbjct: 92 ASDALQANASAQYPYQTPVVGRSKSGWDATGGSYSTTTPEDGGVTILSKWPILRKEQVVY 151 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 A + + N+ +++ +NG K+ V+ H +S + + S+Q + Sbjct: 152 KDACGADWWS-NKGFAYVVLNVNGTKVHVVGTHAQSTDPGCGAG----EAAQMRSRQFKN 206 Query: 191 LKDWITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC---- 245 + ++ + ++AGD N Sbjct: 207 IDAFLDAKNIPANEQVIVAGDMNVDSRTPEYASMLADADLAGADTRTGHPYSFDTAQNSI 266 Query: 246 -NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------KRLSDHCPI 298 N + +DY + + + E+ + S LSDH P+ Sbjct: 267 ANYRYPTDPREDLDYVLYRKANARPAGWENNVVKEQSTPWTVSSWGKSYTYSNLSDHYPV 326 Query: 299 S 299 Sbjct: 327 I 327 >gi|218532288|ref|YP_002423104.1| exodeoxyribonuclease III Xth [Methylobacterium chloromethanicum CM4] gi|218524591|gb|ACK85176.1| exodeoxyribonuclease III Xth [Methylobacterium chloromethanicum CM4] Length = 269 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 29/306 (9%), Positives = 73/306 (23%), Gaps = 66/306 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + +WNIN + ++ + D++ LQE + Sbjct: 3 LTVTTWNIN----------------SVRLRIESVLRFLREAQPDVLCLQETKCP---DDL 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + + +A+ + + + D+ R Sbjct: 44 FPLKAFKG------SGYENIVFAGQKGYNGVAIISRFPLLTRDVMSFCERPDA------R 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +L G ++ D +P + L+ W ++ Sbjct: 92 HISAVLGPEAGPAAGIVLHDFYVPAGGDMPHRDLNPKFAHKLDFLSELRGWGGRRVSG-- 149 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N + + + Sbjct: 150 PAILVGDLNVAPLEHDVWSHKQLLDVVSHTPVETEALETLRGEAGWIDAARLLTPEPEKI 209 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + + +R SDH P Sbjct: 210 YTWWSYRSPNWELANKGRRLDHTWVSPDLAG-------TVRRVAVFREARGWERPSDHVP 262 Query: 298 ISIDYD 303 +++ + Sbjct: 263 VTLTLE 268 >gi|156933850|ref|YP_001437766.1| hypothetical protein ESA_01676 [Cronobacter sakazakii ATCC BAA-894] gi|156532104|gb|ABU76930.1| hypothetical protein ESA_01676 [Cronobacter sakazakii ATCC BAA-894] Length = 370 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 84/258 (32%), Gaps = 19/258 (7%) Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + +L+AD++ + E S A+A + + R + + I + Sbjct: 119 AKVMSDLNADVLAVVEAESRPALAAFNQEIIAALGGEPFRHVMVIDGNDTRGIDVGLLTG 178 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 L +S+ + +G +WV+ HLKS + Sbjct: 179 ANYPIGLMRSHVDDRDARGQLIFSRDCPEYSVPLKSGDTLWVMVNHLKSKGYGG-----K 233 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFV-IAGDFNRKINYLGNNDDFWKT-IDPNDSLI 235 + S + QAQ + + ++++ F+ IAGDFN +T + + Sbjct: 234 AESDARRKAQAQRVAEIYKARRDAGEQFIAIAGDFNDTPESDALAPLLKETDLRDAFTHP 293 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF----------SEILYNEDDI 285 F N NK +DY ++ ++ + ++ Sbjct: 294 AFDNGGYPGTWGNSAKNNK--LDYILLSPALWERVTAGGVIRKGMWPGERPVKWEVYPEL 351 Query: 286 KSRGKRLSDHCPISIDYD 303 K + SDH + +D + Sbjct: 352 KKPQQAGSDHAALWVDLN 369 >gi|260433435|ref|ZP_05787406.1| exodeoxyribonuclease III [Silicibacter lacuscaerulensis ITI-1157] gi|260417263|gb|EEX10522.1| exodeoxyribonuclease III [Silicibacter lacuscaerulensis ITI-1157] Length = 259 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 85/305 (27%), Gaps = 72/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +++ S+NIN + L ++ + D+ LQE+ N Sbjct: 1 MKIASFNING----------------IKARADALLRWLDDARPDVAVLQEIKSVDENFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++F + + + +AV K D +R Sbjct: 45 EIFEERGYNV------------ETHGQKSFNGVAVLSKLPLEDVTRGLPGDDDDEQARW- 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E V + K + + ++L + + Y + + L + +S Sbjct: 92 ----IEATV-VGKKALRICGLYLPNGNPAPGPKFDYKLA------WMERLHQRAVELLKS 140 Query: 202 LVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P ++AGD+N + ++ I F + Sbjct: 141 EEPALMAGDYNVIPQAEDAKRPEAWREDALFRSESRAAFRRILNLGFTDAFRARTQGPGH 200 Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ID+F++ A L D ++ SDH PI Sbjct: 201 YTFWDYQAGAWNRNDGIRIDHFLLTPQAADLLQDC-------RIDAEVRGQEKPSDHVPI 253 Query: 299 SIDYD 303 +D D Sbjct: 254 WVDLD 258 >gi|304438523|ref|ZP_07398463.1| exodeoxyribonuclease III [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368606|gb|EFM22291.1| exodeoxyribonuclease III [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 250 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 74/303 (24%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R VSWN+N L + K LDAD LQE + Sbjct: 1 MRFVSWNVNGLRAALKKGFM---------------EAFKELDADAFCLQETKMQEG-QAI 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + + + A+ + + + D R Sbjct: 45 LDLPGYEQYFYSAEKKGY----------SGTAIFTRVKPLSVAYGIGIPEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++++ ++ + + L+ Sbjct: 91 -----VITMEFNDVYLVTVYTPNAKRALERLDYRMTWEDAFRAFLLDLRA--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + + F A Sbjct: 138 PVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGKFTELLNAGFVDTFRALYPDLTGAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ + + ++ SDHCP+S Sbjct: 198 TWWSYLRHARETNAGWRIDYFLVSEELRDRIAAAEIHADVF-----------GSDHCPVS 246 Query: 300 IDY 302 + Sbjct: 247 LTL 249 >gi|91785939|ref|YP_546891.1| endonuclease/exonuclease/phosphatase [Polaromonas sp. JS666] gi|91695164|gb|ABE41993.1| Endonuclease/exonuclease/phosphatase [Polaromonas sp. JS666] Length = 267 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 82/287 (28%), Gaps = 50/287 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA---- 79 ++++ NI+ LR+ + + AD+VFLQE+ + Sbjct: 23 FKVLTVNIHKGFTFFNRKF----------ILPELREAVRTVGADVVFLQEVTGNHLKHAD 72 Query: 80 -VAKVFPKNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + T + + + H AV K V ++ + + Sbjct: 73 KFDNYPDTPHYEFLADTIWPQFAYGRNAVYTNGHHGNAVLSKFPIVRFENRDVSISG--- 129 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R + +++ G+ + V + + + QQ + L D + + Sbjct: 130 --PERRGLLHCELKVPGRSVNVHAVCVHLGL-----------METHRVQQMEMLCDLVRK 176 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI-RFPKEKDSRCNANKNLRNKIP 256 P V+AGDFN ++ L F + + Sbjct: 177 DIPPHAPVVVAGDFNDW------RLRAHTLLESGADLHEVFVQANGQAARTFPARLPLLR 230 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D + + LSDH P++ + + Sbjct: 231 LDRIYVRNAIGHAPVVLP-----------SRPWSHLSDHAPLAAEIE 266 >gi|16803822|ref|NP_465307.1| hypothetical protein lmo1782 [Listeria monocytogenes EGD-e] gi|16411236|emb|CAC99860.1| lmo1782 [Listeria monocytogenes EGD-e] Length = 251 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 85/304 (27%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L +Y + +DADI LQE Sbjct: 1 MKLISWNVNGLRAAVKKGF---------------LEYFEEVDADIFCLQETKLQEG-QIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + Q + D+ R Sbjct: 45 LDLPAYKDYWN----------YAVKKGYSGTAIFTKVEPLSVQYGLGIPEHDTEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++ +++ ++ + + +++ ++ Sbjct: 91 -----VITLEFEEFFMVTVYTPN-------SQAELKRLDYRMTFEDAILEYVK-NLDNTK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + F +A Sbjct: 138 PVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + L+ + SDHCP+ Sbjct: 198 SWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVL-----------GSDHCPVE 246 Query: 300 IDYD 303 ++ + Sbjct: 247 LELN 250 >gi|289628537|ref|ZP_06461491.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649841|ref|ZP_06481184.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. aesculi str. 2250] gi|330870432|gb|EGH05141.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 380 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 46/325 (14%), Positives = 96/325 (29%), Gaps = 68/325 (20%) Query: 21 AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 Q +++++WNI L+ + + + + + + ++ DIV Sbjct: 69 GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYNLDEVARVIRDEQPDIVL 128 Query: 71 LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 LQ + VA ++P +T ++ E + N S A Sbjct: 129 LQGVDDGAKNSDYEDQLALIKERVADLYPCSTQAFYWKAEFVPNPHIWGS-VGRKLATLS 187 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174 R + P+ A + + A+ + +G K+ V++ L Sbjct: 188 RFHIDSAERVQLPVPDANIISRQFQPKDALLISYLPLRDGGKLAVINTSLT--------- 238 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI------ 228 T + +Q + + + + P++I GDFN + + Sbjct: 239 -TARHAGDTAQKQVVATEKQLDKLESGGTPWLIGGDFNLLPLGQYQRLPKEQRLGYAADS 297 Query: 229 ---DPNDSLIRFPKEKDS----RCNANKNLRNKIPI-------DYFVMDQNAYKFLIQES 274 + + P +S R + N I DY + + S Sbjct: 298 ELHELWEKYPMIPDNAESSGIDRGKWLTHFPNDSRINGPDRTVDYLFYSPSLKR----VS 353 Query: 275 FSEILYNEDDIKSRGKRLSDHCPIS 299 + +SDH P+ Sbjct: 354 ARVRRDDTLL-------ISDHLPVI 371 >gi|302897971|ref|XP_003047751.1| hypothetical protein NECHADRAFT_72444 [Nectria haematococca mpVI 77-13-4] gi|256728682|gb|EEU42038.1| hypothetical protein NECHADRAFT_72444 [Nectria haematococca mpVI 77-13-4] Length = 305 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 44/292 (15%), Positives = 77/292 (26%), Gaps = 25/292 (8%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+V++N+ + K R L ++ + LQE Sbjct: 25 PLRIVTFNVRY-ATTNFEPHEKPWDVRCPKLVNQLSFITAGHESPFICLQECLYPQVKDI 83 Query: 83 VFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + W H S + +++ P + Sbjct: 84 QSRLGDGWSHIGRGRGSGEHDGEFSPIFYRSDNWSCERSEVRWLSKTPF-EPSRGWDAVL 142 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 NR G V+ + F S LL + A+ +W + S Sbjct: 143 NRIVTMGEFLHRGTGTRVIVMSTH---FDHIGVKARENSAKLLIKFAR---EWGSGGVGS 196 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK------- 254 ++ GDFN N G +D PK K Sbjct: 197 PSAVLVGGDFNSSPNDGGYKIMTAPDSGMSDISHLLPKSAHYGNQITYTSFGKYDSSGEG 256 Query: 255 ---IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID+ + + + +++D R+SDH P+ D D Sbjct: 257 WEEARIDFLFIQEPRTAHVKTFGVLANFFDDDV------RVSDHRPVVSDLD 302 >gi|91794256|ref|YP_563907.1| endonuclease/exonuclease/phosphatase [Shewanella denitrificans OS217] gi|91716258|gb|ABE56184.1| Endonuclease/exonuclease/phosphatase [Shewanella denitrificans OS217] Length = 873 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 41/371 (11%), Positives = 92/371 (24%), Gaps = 88/371 (23%) Query: 22 QKVRLVSWNINTLSEQ----EGVSLWKNSVKRTTSDY----TLLRQYAKNLDADIVFLQE 73 +R+ S+N+ + N T D T + ++ADIV L E Sbjct: 463 GDIRVASFNVLNFFNDAVGGDANPGGSNRGALTEEDMLKQRTKIVSAITAMNADIVGLME 522 Query: 74 MGSYNAVA-------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + + ++ + K ++ I + R K Sbjct: 523 IANNGFGEQSAIQNLLTALNAELTADEAYSFVELEAADKFEGKYFGSDAITVGMLYRAKT 582 Query: 121 VRVLQQSYPLLGA------------------KDSFSRAGNRRAVELLVEINGKKIWVLDI 162 V + + ++ ++ + A R ++ I KK+ V+ Sbjct: 583 VSLASPAKVIITPEQHAAEGVATREKAGKVETNTGNDAYQRHSLAQTFSIQDKKLTVVVN 642 Query: 163 HLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES---------- 201 H KS + A+ L + + + Sbjct: 643 HFKSKGSGCLEDWVSFEDKSDPADMQGKCNEFRVSAAKVLGESLKDVEGDLLVIGDLNAY 702 Query: 202 --LVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPKEKDSRCN 246 P + D++ + W T++ + K Sbjct: 703 GMEDPLRVLTDYDASQSDRDIVTASWTTLNGKIYEKEGTKIEKGYGLINLNTKAHGVSTY 762 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR-------------GKRLS 293 + +D+ + + + ++ I E + S Sbjct: 763 SYSYNGELGNLDHALGNASLAAKVVGIEDWHINSVESTLFEYPSKFTGDLLKSDNAFSAS 822 Query: 294 DHCPISIDYDF 304 DH P+ + + Sbjct: 823 DHDPVIVALSY 833 >gi|188581164|ref|YP_001924609.1| exodeoxyribonuclease III Xth [Methylobacterium populi BJ001] gi|179344662|gb|ACB80074.1| exodeoxyribonuclease III Xth [Methylobacterium populi BJ001] Length = 264 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 80/303 (26%), Gaps = 64/303 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N L + D+V LQE+ + Sbjct: 1 MRITTWNVN----------------SIKQRVGHLLGFLDEAKPDVVCLQELKCQDT---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + +A+ + LQ + L G R Sbjct: 41 ------SFPREEIEAAGYAVETLGQKAYNGVALLVRAP--LQYTQLLRGLPGDAEDEQAR 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 L+ + + I+L + + +Y + LK S Sbjct: 93 YIEALVHGEGVAPVRIASIYLPNGNPAPGPKYSYKLAFMAR------LKAHARALMASED 146 Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 V+AGDFN F + + E + Sbjct: 147 ALVLAGDFNVIPEPEDAADPAAWTQDALFLPETRRAFRALLAEGFTDGLRACEPSAGLYT 206 Query: 248 NKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + I ID+ ++ A L+ S + ++ SDH P+++ Sbjct: 207 FWDYQAGCWPRNFGIRIDHLLLSPQAADRLVSASVQKH-------LRGLEKPSDHVPVTV 259 Query: 301 DYD 303 + Sbjct: 260 ELS 262 >gi|229134542|ref|ZP_04263353.1| Exodeoxyribonuclease [Bacillus cereus BDRD-ST196] gi|228648935|gb|EEL04959.1| Exodeoxyribonuclease [Bacillus cereus BDRD-ST196] Length = 252 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 84/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + +Y + +ADI LQE+ + + Sbjct: 1 MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQSGQIDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ + + + ++ A+ K + + D R Sbjct: 47 NPEGYYTYW-----------NYAVKKGYSGTAIFTKKEPISVTYGLGIEEHDQEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + + + L + Sbjct: 92 -----VITLEFDDFYMITLYTPNSKRGLERLDYRMEWEDDFRAYIKRL--------DEKK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + + + + + A Sbjct: 139 PVIFCGDLNVAHKEVDLKNPKSNRKNPGFSDEEREKFTCVLEAGFIDTYRYLYPDQEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV+ + + D + SDHCP+ Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVISERLKHKI-----------TDAKINSEIMGSDHCPVE 247 Query: 300 IDYDF 304 + +F Sbjct: 248 LHINF 252 >gi|254437353|ref|ZP_05050847.1| exodeoxyribonuclease III [Octadecabacter antarcticus 307] gi|198252799|gb|EDY77113.1| exodeoxyribonuclease III [Octadecabacter antarcticus 307] Length = 266 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 39/308 (12%), Positives = 83/308 (26%), Gaps = 71/308 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + L + + D+ LQE+ S V + Sbjct: 1 MKIATFNING----------------VKARIGALTDWLEASKPDVALLQEIKS---VDEG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS---YPLLGAKDSFSRA 140 FP+ + + + +A+ K ++ Sbjct: 42 FPREHF-------ENLGYRVETHGQKGFNGVAILSKLPLEDISRGLPDAAGAGREGVDDI 94 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R ++ K I + ++L + + Y + LK Q Sbjct: 95 EARYIEATVI--GEKAIRICGLYLPNGNPAPGPKYDYK------LRWMDRLKTRAQQLMA 146 Query: 201 SLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 PF++AGD+N + F + ++ L + Sbjct: 147 LEEPFLMAGDYNIIPQPEDAARPNVWTDDALFRPDSRAAFRRLLNLG--LTEAFRACHQG 204 Query: 245 CNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + ID+F++ L ++ SDH Sbjct: 205 SGHYSFWDYQAGAWDKNDGIRIDHFLLSNQCADLLKDAWIE-------SGVRGREKPSDH 257 Query: 296 CPISIDYD 303 P+ ++ D Sbjct: 258 VPVWVELD 265 >gi|296113240|ref|YP_003627178.1| exodeoxyribonuclease III [Moraxella catarrhalis RH4] gi|295920934|gb|ADG61285.1| exodeoxyribonuclease III [Moraxella catarrhalis RH4] gi|326560231|gb|EGE10619.1| exonuclease III [Moraxella catarrhalis 7169] gi|326562876|gb|EGE13163.1| exonuclease III [Moraxella catarrhalis 46P47B1] gi|326563683|gb|EGE13935.1| exonuclease III [Moraxella catarrhalis 103P14B1] gi|326565237|gb|EGE15422.1| exonuclease III [Moraxella catarrhalis 12P80B1] gi|326566451|gb|EGE16601.1| exonuclease III [Moraxella catarrhalis BC1] gi|326570258|gb|EGE20303.1| exonuclease III [Moraxella catarrhalis BC8] gi|326570995|gb|EGE21019.1| exonuclease III [Moraxella catarrhalis BC7] gi|326573291|gb|EGE23259.1| exonuclease III [Moraxella catarrhalis 101P30B1] gi|326575810|gb|EGE25733.1| exonuclease III [Moraxella catarrhalis CO72] gi|326576891|gb|EGE26797.1| exonuclease III [Moraxella catarrhalis O35E] Length = 271 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 83/311 (26%), Gaps = 75/311 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 VS+NIN L + +R ADI+ LQE ++A+ Sbjct: 3 TFVSFNINGLRARPH-------------QLEAIRDIL---GADIIGLQETKVHDAL---- 42 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + + + + H +A+ K Q G D+ RR Sbjct: 43 ------FPVNMVQDLGYHVEFFGQKSHYGVALASKIAPTFVQKGFPFGHDDA-----QRR 91 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + + +G+ I VL+ F ++ + + L +I + + Sbjct: 92 LIHARYDFDGRSIDVLN-----GYFPQGENRSHEIKFPMKREFYADLNRYIDELQADGRE 146 Query: 205 FVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 +I GD N ++L +++ + + Sbjct: 147 LIIMGDMNISPEDIDVGIGAANAKRWLAKGTCSFLPEERAWYQMLMSTGLTDTYRLFYPK 206 Query: 244 RCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + ID+ + + + Sbjct: 207 SHDEFSWFDYRSRGFEDTPKRGLRIDHILCTDTLKNDCVAAGI-------SYDIRAMDKP 259 Query: 293 SDHCPISIDYD 303 SDH PI ++ Sbjct: 260 SDHAPIWAKFN 270 >gi|291515221|emb|CBK64431.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301] Length = 306 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 37/285 (12%), Positives = 82/285 (28%), Gaps = 33/285 (11%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++R++S+N+ S +G + W N + + ++ +QE Sbjct: 52 NQLRVMSFNVRYSSGDDGANSWDNRK-------KAVPAMFADQQPTVLGVQEARLDQKTY 104 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + ++ +K P + + + + Sbjct: 105 MDENCAGYKSVGVGRTDGQNAGEFMAIYYLADAVKLEKWGTFWLSDTPDVPSV-GWDAST 163 Query: 142 NRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R A L +G+K + ++ H+ + + ++ + ++ I Sbjct: 164 YRTATWALFTHYKSGRKFFYVNTHIDHVGQVAAQKS------------MELIEAKIRSLN 211 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 P V+ DFN+ ++ D K + + K S N ID+ Sbjct: 212 PDNQPTVLTADFNKMLDS-PIFDGVKKFMADARTTAPVTDNKASFNNFGGATNYP-RIDH 269 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D + +SDH PI+ +F Sbjct: 270 IFSSGFTPLRF---------ATVDQRYEKVPYISDHYPIAAVLEF 305 >gi|308813431|ref|XP_003084022.1| Glucose-repressible alcohol dehydrogenase transcriptional effector CCR4 and related proteins (ISS) [Ostreococcus tauri] gi|116055904|emb|CAL57989.1| Glucose-repressible alcohol dehydrogenase transcriptional effector CCR4 and related proteins (ISS) [Ostreococcus tauri] Length = 603 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 89/305 (29%), Gaps = 50/305 (16%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 R+VSW + ++ + S T R+Y + LDAD++ LQE+ Y+ Sbjct: 323 RVVSW-------------TERALMKAKSRLTRTREYIRELDADVLCLQELDGYDDDGSAV 369 Query: 85 PKNTWCIFYSTERLINHSKRDSNN----DIHTAIAVRK--------------KNVRVLQQ 126 + + S + R + +A R+ + Sbjct: 370 TSTSLPSWRSWLESEGYDSRHVRRTNTKKDGSCVAWRRNAFTCVDHRAVSYNDIAHEMYS 429 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEI-------NGKKIWVLDIHLKSFCFLDSLENTYSP 179 D S R + + + +G ++ V H+ F + Sbjct: 430 KSDNGDVDDERSDERERYLRDCVANLTVLKRMRDGAEVLVCSTHI--FWDPQYSDVKVQQ 487 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + L+ + +++ + + + +I GDFN + + + Sbjct: 488 AKRLVEECERFVDERASAGSDVRPHVIIGGDFNSEPDSDVYRVMTATFSSAS-------- 539 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N IDY + ++E E SDH P+ Sbjct: 540 SGREPAFTNVTPSFTACIDYIFVSDGITVTRVKEQPRRETLGE--GLPNETHPSDHLPVV 597 Query: 300 IDYDF 304 +D F Sbjct: 598 VDVSF 602 >gi|292670448|ref|ZP_06603874.1| exodeoxyribonuclease III [Selenomonas noxia ATCC 43541] gi|292647858|gb|EFF65830.1| exodeoxyribonuclease III [Selenomonas noxia ATCC 43541] Length = 250 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 77/303 (25%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R VSWN+N L ++ K L+AD+ LQE + Sbjct: 1 MRFVSWNVNGLRAALKKGFMES---------------FKELNADVFCLQETKMQEG-QAI 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + + + A+ + + + D+ R Sbjct: 45 LDLPGYEQYFYSAEKKGY----------SGTAIFTRVKPLSVSYGIGIEEHDNEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++++ ++ + + L+ Sbjct: 91 -----VITMELPDVYLVTVYTPNAKRALERLDYRMAWEDSFRAFLLDLRA--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + + F R A Sbjct: 138 PVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGKFGELLAAGFVDTFRALYPDRTGAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ + ++ SDHCP+S Sbjct: 198 TWWSYLRHARETNAGWRIDYFLVSAELRDRIAAAEIHSDIF-----------GSDHCPVS 246 Query: 300 IDY 302 + Sbjct: 247 LTL 249 >gi|16799425|ref|NP_469693.1| hypothetical protein lin0348 [Listeria innocua Clip11262] gi|16412777|emb|CAC95581.1| lin0348 [Listeria innocua Clip11262] Length = 257 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 41/286 (14%), Positives = 77/286 (26%), Gaps = 36/286 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + ++NI E W+ T D + ++E + + Sbjct: 2 FSVTTFNIRFDDTSEQKKSWELRKTLTK-------SLLDKYQWDFMGVEEPLLPQ-MRDM 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 W F + ++A + P + + S + R Sbjct: 54 KEMLDWDYFGVGRDDGFEKGEFTAVFYNSARFSLLQEGHFWLSETPDVPSIHSTAM-FPR 112 Query: 144 RAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 V +E +G++ ++ + HL A L Sbjct: 113 ICVWGKLEDSTDGRQFYIFNTHLDHVS-------------EEARLFASQLLLQKAGLIAE 159 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPID 258 +P ++ GDFN + N K D K + + LR ID Sbjct: 160 NLPVILLGDFNTEPETPTYNFITKKYQDAQLISQTPIKGPIGSFHDFQPLRPENELEKID 219 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 Y + + F Y + G SDH P++ ++ Sbjct: 220 YIFVSKE---------FRVHSYKTITDQVDGCSASDHFPVTATLEW 256 >gi|197106969|ref|YP_002132346.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1] gi|196480389|gb|ACG79917.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1] Length = 268 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 30/305 (9%), Positives = 73/305 (23%), Gaps = 67/305 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + ++ + D++ LQE+ Sbjct: 3 LRICTWNVN----------------SVRLRVEQVARFVREQAPDVLCLQEIKCREG---- 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + R + +A+ + + + G Sbjct: 43 -----EFPVNAFAEMGLPHVRIAGQKGWHGVAIASRLPIEDAPRLDVCREGHARCVGGTV 97 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 VE+ + D+ + +P + L + ++ Sbjct: 98 AGVEVH-------------NFYIPAGGDTPDREPNPKFDHKLDFYEKLTAELAKR-NPKA 143 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P + GD N + + F K + + + Sbjct: 144 PLAVVGDLNVAPGEHDVWNHRYMSKVVSHTPAEVEAFGKLVASLGFIDLPRAQTPEPEKV 203 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ ++ + D +R SDH P Sbjct: 204 FSWWSYRAADFRASNRGLRLDHILVTPGLKE--AAFRLGSAASRVHDDVRAWERPSDHAP 261 Query: 298 ISIDY 302 ++ D Sbjct: 262 VTADL 266 >gi|145545333|ref|XP_001458351.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124426170|emb|CAK90954.1| unnamed protein product [Paramecium tetraurelia] Length = 326 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 56/308 (18%), Positives = 89/308 (28%), Gaps = 39/308 (12%) Query: 22 QKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + ++S+NI EQ S + + T + KN +ADI+ LQE+ + Sbjct: 31 HTISILSYNILADIYCEQSYFSYADFQNLKFLNRSTKIIDQLKNFNADILCLQEVDNIEF 90 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + I Y + + I + L Q G + R Sbjct: 91 YQDNIKNLQYDICYCQRPQRSDGCLIAFKIEKFKILI--SQEYSLDQLALDYGLPLQYLR 148 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT-QK 198 + V L + K+ + +IH D L Q L ++ QK Sbjct: 149 QNVFQIVRLEHLLTKKQFIIGNIHTFWNPNQDD----------LKFFQIVQLVQFMEAQK 198 Query: 199 KESLVPFVIAGDFNRKINYLGN----------------------NDDFWKTIDPNDSLIR 236 + + GDFN +D ++ P L Sbjct: 199 ESEDQILIFCGDFNSLPKSNPIQYIQKNNPIVERIEMSTNQIKLQNDIFQHYGPPK-LNW 257 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 N K IDY NA I ++ L ++ SDH Sbjct: 258 ESAYHPFPTFTNYTNNFKGCIDYIYY-HNAKVEKILSIPNQSLLQKEVALPNSNFPSDHV 316 Query: 297 PISIDYDF 304 PI +DF Sbjct: 317 PILAYFDF 324 >gi|148550719|ref|YP_001260158.1| exodeoxyribonuclease III Xth [Sphingomonas wittichii RW1] gi|148503138|gb|ABQ71391.1| exodeoxyribonuclease III Xth [Sphingomonas wittichii RW1] Length = 269 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 80/302 (26%), Gaps = 70/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N ++ +L ++ + D+V LQE Sbjct: 1 MKIATYNVNGVNG----------------RLPVLLRWLEEAQPDVVVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S R + + +A+ + + + L G D +R Sbjct: 35 LKAPQEKFPESAIRDLGYDVIWHGQKSWNGVALLSRVGEIHETRRGLPGDPDPG---QSR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + I + ++L + + Y + L + ES + Sbjct: 92 YIEAAV-----NGILIGGLYLPNGNPRPGPKFDYK------LRWFDRLIEHAAGLLESGL 140 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++AGDFN L + + Sbjct: 141 PVMLAGDFNVMPTDLDVYKPERWLDDALFAPEVRAAYFRLLDQGWTDALRTLHPGEVIYT 200 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ L + D ++ SDH P+ I Sbjct: 201 FWDYFRNAYGRNAGLRIDHLLLSPALADRL-------LDAQVDRHVRGWEKTSDHAPVWI 253 Query: 301 DY 302 + Sbjct: 254 EL 255 >gi|117925756|ref|YP_866373.1| exodeoxyribonuclease III [Magnetococcus sp. MC-1] gi|117609512|gb|ABK44967.1| Exodeoxyribonuclease III [Magnetococcus sp. MC-1] Length = 257 Score = 89.6 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 87/304 (28%), Gaps = 74/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +R+ +WN+N+++ + Q+ D++ LQE+ S A Sbjct: 1 MRIATWNVNSMN----------------VRQEHVAQWLAEDPCDLLCLQELKMVSEKFPA 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F W + + + +AV + + L D Sbjct: 45 ERFKSLGWHLL------------ANGQKTYNGVAVLSRFPLEERDVVLDLPGVD----PA 88 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R + + V + V++ ++ + + S + Y L+ ++ + S Sbjct: 89 QKRLMAVTVN----GVRVVNCYVPNGSEVGSDKYHYKLD------WLAKLQSFVQAQLAS 138 Query: 202 LVPFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKDSRCNA 247 V+ GD+N + +D K + L + Sbjct: 139 YPQLVVLGDYNIAPDDRDVHDVSFWAGKILVSPPERSAYQALCGLGLTDAFRHLQPEGGY 198 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + ID+ + L D +R SDH P+ Sbjct: 199 FSWWDYRLGSFQRNMGVRIDHLLSSPALTAKLTHCHI-------DREPRGWERPSDHAPV 251 Query: 299 SIDY 302 Y Sbjct: 252 IATY 255 >gi|333027971|ref|ZP_08456035.1| putative large secreted protein [Streptomyces sp. Tu6071] gi|332747823|gb|EGJ78264.1| putative large secreted protein [Streptomyces sp. Tu6071] Length = 612 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 35/329 (10%), Positives = 78/329 (23%), Gaps = 69/329 (20%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQ 72 ++ + ++N+ L + + L DIV ++ Sbjct: 300 SAKPGADDELSVATYNVENLDPTDP-----------QEKFDALADGVVTHLASPDIVSIE 348 Query: 73 EMGSYNAVAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 E+ N V + + + + +I Sbjct: 349 EVQDDNGAKDDGTVSAEQTLKKFTDAIVAAGGPRYAWRGIDPENDKDGGEPGGNIRQVFL 408 Query: 116 VRKKNVRVLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEING 154 V ++ P + + +R+ + G Sbjct: 409 YNPDRVSFTDRAGGDATTATAVVERDGAPALAASPGRVDPANPAWQDSRKPLAGEFVFRG 468 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIA 208 + ++V+ H S L P S + QA + ++ Q + V+ Sbjct: 469 ETVFVVANHFNSKGGDQPLTAAQQPPVRGSETQRHAQAASVNAFVRQLTALDKKARVVVL 528 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 GD N + + E+ N +D ++ + Sbjct: 529 GDLNDFEFSDTTKTLTKGNVLRSGIAQLPSDER----YTYVYQGNSQVLDQILVSKGVKS 584 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCP 297 F + + + SDH P Sbjct: 585 FTYDSVHINAEFAQQN--------SDHDP 605 >gi|326922202|ref|XP_003207340.1| PREDICTED: endonuclease/exonuclease/phosphatase family domain-containing protein 1-like, partial [Meleagris gallopavo] Length = 471 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 29/296 (9%), Positives = 76/296 (25%), Gaps = 37/296 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+ ++ ++ +QE+ A+ K Sbjct: 166 LRVATWNLQ---------SCSIEKANNPGVREVICMTLLENSIKLLAVQELLDREALEKF 216 Query: 84 FPKNTWCIFYSTERLINH------------SKRDSNNDIHTAIAVRKKNVR-VLQQSYPL 130 + + + S + ++ + S+ Sbjct: 217 CMELNQPTLPNIRKWKGPRGCWKGVVSEKPSGQLPKGVEYSGFLWDTTAGIELKDASFQE 276 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + R ++ + ++++HL + S Sbjct: 277 NVQTNGNGRHSYPHPYIAHFKVGMNDLTLVNLHLALAPAVGDNAGKNHDSHK-----LAT 331 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + + + +I GDFN+ + ++ + P + + KN Sbjct: 332 FAQTLQESLKGEKDVIILGDFNQAPDSSDHD-----ILRKEKFHHLVPSNTFTNI-STKN 385 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302 + +D + ++ K I SDHCP+ ++ Sbjct: 386 PQGSKSLDNMWISRSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASDHCPVLAEF 441 >gi|284031341|ref|YP_003381272.1| exodeoxyribonuclease III Xth [Kribbella flavida DSM 17836] gi|283810634|gb|ADB32473.1| exodeoxyribonuclease III Xth [Kribbella flavida DSM 17836] Length = 267 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 30/304 (9%), Positives = 79/304 (25%), Gaps = 63/304 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ + N+N + + + + + D +++ LQE+ + + V + Sbjct: 2 LKVATVNVNGVRA---------------AYRRGMAPWLERTDPELLLLQEVRATDEVLRD 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 W + ++ R +AV + ++ R Sbjct: 47 HLGGDWQLVHAEPVTEGSKGRA-------GVAVASRRPIKAER----TDIGPERFTGCGR 95 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V +G + + ++ + F + + +T+ + Sbjct: 96 WVEADVVLDDGSTLTAVSTYVFTGEFETPPRQEEKYAF------LDAITVRLTELRADGR 149 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N L + + + + Sbjct: 150 HVLMCGDLNIAHREVDLKAWKANRKKSGFLPEERAWLDRLFEAGWVDLGRRFGGDGPGPY 209 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDY + + D + +R SDH P+ Sbjct: 210 SWWSWRGKAFDNDAGWRIDYQIASPELAAAATGCTV-------DRAPTYAERWSDHAPVV 262 Query: 300 IDYD 303 Y+ Sbjct: 263 ATYE 266 >gi|187735459|ref|YP_001877571.1| exodeoxyribonuclease III Xth [Akkermansia muciniphila ATCC BAA-835] gi|187425511|gb|ACD04790.1| exodeoxyribonuclease III Xth [Akkermansia muciniphila ATCC BAA-835] Length = 253 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 75/304 (24%), Gaps = 76/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N L G + L+ D++ LQE+ + K Sbjct: 1 MKLVSWNVNGLRAVLGKG---------------MADAVDALEPDVLCLQEIKARPEQVKD 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++W ++ + + + PL + +R Sbjct: 46 LWISSWPHQLWNPAEKA---------GYSGVLILSRV-------RPLSTSVGIGWPEHDR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E G ++++ + + + + L + Sbjct: 90 EGRVCTMEFEG--FYLVNCYTPNSQNELVRLPYREQWDAAFREYVAGLAE--------TK 139 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V GD N + + F Sbjct: 140 PVVFCGDLNVAHEEIDIARPKENRFSAGFSDQERAGFTLLLEAGFTDTFRALHPEEPGWY 199 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + + SDHCP+S Sbjct: 200 SWWSYRAGARARNIGWRIDYFCVSNPLASRVKDAAIH-----------PDVTGSDHCPVS 248 Query: 300 IDYD 303 ++ D Sbjct: 249 LEID 252 >gi|332307725|ref|YP_004435576.1| Endonuclease I [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175054|gb|AEE24308.1| Endonuclease I [Glaciecola agarilytica 4H-3-7+YE-5] Length = 1500 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 94/328 (28%), Gaps = 53/328 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLW-----------KNSVKRTTSDYTLLRQYAKNLDADIVF 70 +++ S N+ VS +S + +DADIV Sbjct: 1110 GNLKVASLNVLNYFNTLDVSPNLCGPSNLECRGADSEEEFERQRAKTLAALLAMDADIVG 1169 Query: 71 LQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV---- 121 L E+ + +AV + + +T +++ + I A+ + V Sbjct: 1170 LMEVENNGFGTSSAVGDLVSGLNDVLGANTYAVVDAGSAIGTDAISVALIYKPAVVSAIG 1229 Query: 122 ---RVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKS-----FCFLD 171 + + F NR A+ N +++ + H KS D Sbjct: 1230 APAILDSSNSISDDDGPLFLDTKNRPALNQKFALTENNEELVISVNHFKSKGSSCGAGDD 1289 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 ++ AQ L +++++ P +I GD N + K ++ Sbjct: 1290 DTTTGQGNCNLTRTRAAQALTTFLSEQFAET-PKLIIGDLNA----YALEEPILKILEQ- 1343 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-- 289 K + +D+ + ++ + I +E + Sbjct: 1344 GYTNLANKFGGDEAYSYSFGGEFGYLDHALASAELVDKVVDTTEWHINADEPIVFDYNVE 1403 Query: 290 ---------------KRLSDHCPISIDY 302 R+SDH P+ I Sbjct: 1404 FKSEQQHIDYYAPDAYRMSDHDPVVISL 1431 >gi|160872135|ref|ZP_02062267.1| exodeoxyribonuclease III [Rickettsiella grylli] gi|159120934|gb|EDP46272.1| exodeoxyribonuclease III [Rickettsiella grylli] Length = 261 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 84/302 (27%), Gaps = 72/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +WNIN+L + + ++ LQE N Sbjct: 5 FKIATWNINSL----------------RIRLAHVLTWLNTHQPHLLALQETKVQN----- 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A + + + L D+ R Sbjct: 44 -----HHFPEEPFKRAGYHVLYNGQKTYNGVAFISRIP-MQNEVTCLPHFDDT-----QR 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + + +++I++ + L S + Y + + LK ++ + Sbjct: 93 RILVVTI----GSLRIVNIYVPNGSHLGSEKFLYK------LKWLKQLKIYLQHELSLHP 142 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249 ++ GDFN +D K + L + + + Sbjct: 143 SLIVLGDFNIAPKDNDVHDPQIWQGKVLVSPQERKALQDIVALGLKDSFRLFHNEPHQYT 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ + + I D R ++ SDH P+ Sbjct: 203 WWDYRAGAFRRNHGLRIDHILSSTHLISQCIDCEI-------DKEIRRWEKPSDHVPVIA 255 Query: 301 DY 302 Y Sbjct: 256 TY 257 >gi|319952732|ref|YP_004163999.1| endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM 14237] gi|319421392|gb|ADV48501.1| Endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM 14237] Length = 347 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 37/345 (10%), Positives = 83/345 (24%), Gaps = 53/345 (15%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRL---VSWNINTLSE-------QEGVSLWKNSVKRTT 51 + K + + + + + ++ +N+ L + + + T Sbjct: 1 MNKLLFLFLTLINFNLHAQKKNYKIRTIAFYNVENLFDLKNDSLTYDDDRTPEGKDHWTL 60 Query: 52 SDYTL-----------LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN 100 Y + DI+ L E+ + V + I Sbjct: 61 DRYEEKLTHVSKVLSEIGHTISKNSPDIIGLCEVENQQVVEDLV---YHKNLQDKNYGIV 117 Query: 101 HSKRDSNNDIHTAIAVRKK-NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 H I A+ +K + +S LL R R + + ++ ++I+ Sbjct: 118 HFDSPDERGIDVALLYKKSAFIPTSFKSQRLLLQNSEGFRDYTRDQLVVGGLLDNEQIYF 177 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 + H S ++ + L+++ + I + + GD N Sbjct: 178 IVNHWPSRSGGEARSKPNRIEAAKLNKRI--IDSIIRTDSSAK--IISMGDLNDDPTSDS 233 Query: 220 NNDDFW-----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI--- 271 ++ D K + D F N Sbjct: 234 LKKILKTIGDVNKLEEKDLYNPMEKLHKKGIGSLAYRDKWNLFDQFFFTNNLISENKESF 293 Query: 272 ----------------QESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + SDH P+ + Sbjct: 294 TFWKAGVFAPSYLLDPSGRYKGYPLRTYAGGNYVGGYSDHFPVYM 338 >gi|251800194|ref|YP_003014925.1| endonuclease/exonuclease/phosphatase [Paenibacillus sp. JDR-2] gi|247547820|gb|ACT04839.1| Endonuclease/exonuclease/phosphatase [Paenibacillus sp. JDR-2] Length = 264 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 89/291 (30%), Gaps = 38/291 (13%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ ++++N+ Q+G W V R T + ++ QE + + Sbjct: 3 EISVMTFNLRYPEIQDGSDYWPERVDRAT-------NVIRKHHPLLIGTQEGYH-SMLKD 54 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + R H + + ++N + P A S+ + Sbjct: 55 LEIELYEYDWVGRGRFGEHENEHNAIFYNRDELTVEENGQFWLSETPESEASVSWDSSFP 114 Query: 143 RRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-TQKK 199 R +GK ++ + HL +S Q + +++ Q+ Sbjct: 115 RICTWARFHHRRSGKSFYLYNTHLDH----------HSQEAKDRGIQV--IGEYMAKQRA 162 Query: 200 ESLVPFVIAGDFNRKINYLGNN------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 +P ++ GDFN + K D+ + + ++ K + Sbjct: 163 LDGLPALLTGDFNSYPGEFPIRFLRGEIEIDGKKSGLTDAYSQIAENPGLTFHSFKGGDS 222 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 PIDY + D + G+ SDH P+ F Sbjct: 223 GEPIDYIFATAEFQFLSV---------QIDRSQVNGRYPSDHYPVVAAIRF 264 >gi|325285062|ref|YP_004260852.1| Endonuclease I [Cellulophaga lytica DSM 7489] gi|324320516|gb|ADY27981.1| Endonuclease I [Cellulophaga lytica DSM 7489] Length = 1889 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 84/308 (27%), Gaps = 39/308 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + + +V+WNI ++ S + LDADI ++E+ A Sbjct: 1304 KTLDVVAWNIEWFGDEANSPAA-GSPMSDAIQKDSTKAIIAKLDADIYAVEEIADETLFA 1362 Query: 82 KVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS------YPLLGAK 134 ++ + + S + V V+ +P+ Sbjct: 1363 QMVSELPGYDYVLSPAVSYPND---PGVSQKLGFIYNTATVNVVNTKVLLQTIHPMYNGG 1419 Query: 135 DS-------------FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 D ++ + V ING + + L + + Sbjct: 1420 DDSALINYPSATDRFYASGRLPFLMTADVTINGATEQINVVALHARANSGT---DAQGRY 1476 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR----- 236 + + LKD + + ++ GD+N ++ + T N Sbjct: 1477 DMRKYDVEVLKDTLDVQYADKK-LILLGDYNDDVDTTVADITTTTTSSFNAYATDEVNYN 1535 Query: 237 --FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 D + N ID+ + I ES E +SD Sbjct: 1536 IVSKTLSDQDFRSYVFRENM--IDHITITNELNDNYIAESARVHY--EFYDSDYPNTVSD 1591 Query: 295 HCPISIDY 302 H P+S + Sbjct: 1592 HFPVSARF 1599 >gi|311109471|ref|YP_003982324.1| endonuclease/exonuclease/phosphatase family protein 2 [Achromobacter xylosoxidans A8] gi|310764160|gb|ADP19609.1| endonuclease/exonuclease/phosphatase family protein 2 [Achromobacter xylosoxidans A8] Length = 288 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 89/324 (27%), Gaps = 85/324 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+VS+NI+ S LR L D+VFLQE+ N + Sbjct: 4 IRVVSYNIH----------KGRSALGRRDSLNELRLGLYGLRPDLVFLQEVQGRNEQKSL 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + ++ A+ + + ++ + S R R Sbjct: 54 LDAQHESLAAALRLDVAYGRNAIRHETDHGNALLSRFPILDHENLDI-----SDHRLEQR 108 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E+ G+ + +HL F S+Q L + I + Sbjct: 109 GLLHARIELGGRAVHCFVVHLGLFAGS-------------RSRQILALTERIRRMVPDGE 155 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-------------------- 243 P +IAGDFN + L F + + + P+ Sbjct: 156 PILIAGDFNDWGDRLAP--LFVQQLGLYEVFSHAPRSHGGELPRLRDSVKRLSNALRGLP 213 Query: 244 ------------------------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 + +D + S + Sbjct: 214 NGGVSVMERTNQLGMGDSSRLLLPPPRTFPAVFPWFRLDRIY-----QRGFAVRSARVLR 268 Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303 RLSDH P+ + + Sbjct: 269 ------GREWARLSDHSPLLAELE 286 >gi|294777115|ref|ZP_06742572.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus PC510] gi|294448984|gb|EFG17527.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus PC510] Length = 450 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 29/287 (10%), Positives = 78/287 (27%), Gaps = 25/287 (8%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+N + T + + K ADI + E+ + Sbjct: 172 LKVMSFNAENFYMYGNTGNAE-----TLRQHAKILAALKEAKADIYAICEVEQGDFTVDY 226 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ ++ ++ + T + + K + + + + R Sbjct: 227 LCRSLNNALGEERYAWLNTPGQKSSKVQTNVFIYDKVKVLPYKEFKSYNFDNLKMRY--- 283 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--S 201 ++ + K+ + H K+ + S +A+ + Sbjct: 284 IVQCFELKDDKAKVILAMNHFKAKTSGIDKNDGQGGSADRRVMEARECLKVYNELVAYYE 343 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 ++ GD N K + K + + +D+ + Sbjct: 344 DTDVLVLGDLNSYGMEDAI-----KVFTDAGYINLLKKYSPA-AWSYCYRGEVGYLDHSL 397 Query: 262 MDQNAYKFLIQESFSEILYNED---------DIKSRGKRLSDHCPIS 299 ++ + +I +E + R SDH P+ Sbjct: 398 SSPTLTSQIVGAAPWDINASEPAYWGFKYTSYYREDLYRSSDHNPVI 444 >gi|288917707|ref|ZP_06412070.1| exodeoxyribonuclease III Xth [Frankia sp. EUN1f] gi|288350922|gb|EFC85136.1| exodeoxyribonuclease III Xth [Frankia sp. EUN1f] Length = 263 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 84/307 (27%), Gaps = 73/307 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ + N+N + + + + ++ DI+ +QE+ + +A+ Sbjct: 2 LRVATVNVNGIRA---------------ARRRGMGTWLEDRRPDILCVQEVRADDAILAD 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 W I + S +AV + V + Sbjct: 47 AVGPGWHIVH----------EASAAKGRAGVAVLSRAAPVDVRLGLGDFTGSGRW----- 91 Query: 144 RAVELLVEINGKK--IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 VE ++G + V+ +++ + L+ +++ + + Sbjct: 92 --VEADFSLDGDPGLLTVVSVYVHTGEADTPLQEEKYR-------FLAAIRERMAKLAAD 142 Query: 202 LVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ GD N + + + + + Sbjct: 143 GRHVLVCGDLNICHREIDLKNWKGNLKKAGFLPQERAWLDQLFTDDGFVDLVRNFAGEQP 202 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + IDY + + L+ + D + +R SDH Sbjct: 203 GPYTWWSWRGRAYDTDAGWRIDYLISTGQLAERLLSAAV-------DRAPAYDQRWSDHA 255 Query: 297 PISIDYD 303 P+ D+D Sbjct: 256 PVYTDFD 262 >gi|254486542|ref|ZP_05099747.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. GAI101] gi|214043411|gb|EEB84049.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. GAI101] Length = 341 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 48/341 (14%), Positives = 97/341 (28%), Gaps = 62/341 (18%) Query: 24 VRLVSWNINTLSE----QEGVSLWKNSVKRT----TSDYTLLRQYAKNLDADIVFLQEMG 75 +R+ ++N+ + ++ + R L + LDAD V + E Sbjct: 1 MRIATYNVEWFAGLFDQEDRLYNDAGWSARHNVTRAQQTRALGTVFRALDADAVMIIEAP 60 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + R +N+ IA+ ++ P D Sbjct: 61 DQSGKQGTVAALEGFAAHFGLRTSAAIMGFANHTQQE-IALLYDPAKITATHTPGGPVTD 119 Query: 136 SFS-RAGNR--RAVELLVEIN---------------------GKKIWVLDIHLKSFCFLD 171 + R R + + ++I+ G ++ HLKS Sbjct: 120 ANGARGAPRFDGILRIDLDIDAREDLVVFSKPPLELSIETASGFSFQMIGAHLKSKAPHG 179 Query: 172 SLENTYS-----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-- 224 + + + QA WL+ I + E P ++ GD N D F Sbjct: 180 AKNEADALRIGIANRRKQLAQAIWLRGRIDEHLERGSPLMVMGDLNDGPGLDAFEDFFGR 239 Query: 225 ------------WKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAY 267 + DP+ + + + + +DY ++ Sbjct: 240 SSVEIVLGHRGAFALTDPHATRALGQRIGAMPTTSRFWIAPEKRYLQALLDYIMVSPQFT 299 Query: 268 KFLIQESFSEILYNEDDIKSRGKR-----LSDHCPISIDYD 303 + L + + R SDH P++I++D Sbjct: 300 DNNARWRIWHPLDDPECWADADLRDALVTASDHFPVTIEFD 340 >gi|57239110|ref|YP_180246.1| exodeoxyribonuclease III [Ehrlichia ruminantium str. Welgevonden] gi|58579057|ref|YP_197269.1| exodeoxyribonuclease III [Ehrlichia ruminantium str. Welgevonden] gi|57161189|emb|CAH58103.1| putative exodeoxyribonuclease [Ehrlichia ruminantium str. Welgevonden] gi|58417683|emb|CAI26887.1| Exodeoxyribonuclease III [Ehrlichia ruminantium str. Welgevonden] Length = 278 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 41/316 (12%), Positives = 90/316 (28%), Gaps = 76/316 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N L + + + DI LQE+ N Sbjct: 2 LRIATWNVN----------------SIRKRIDHLCTWLTDYNIDIALLQEIKCTND---- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG----------- 132 + + ++ +A+ K V + + Sbjct: 42 ------QFPALEIKSLGYNYYVHGQKARNGVAIITKYPIVEEVVTNIFSLYGTSNVCCEL 95 Query: 133 --AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 +++ +R +E ++ NG KI V I++ + ++S + Sbjct: 96 GSEDFTYNCEESRY-LECVILYNGIKIRVGSIYVPNGQSVES------DAFQYKLGFFDQ 148 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLI 235 LK++++ + ++ GD+N + + +++I Sbjct: 149 LKEYMSFLLKKEEICILGGDYNVAPYPIDMYSYEIMNGKLCCHQFEREKFRSIINTGFFD 208 Query: 236 RFP---KEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 F +K N + ID ++ A + D Sbjct: 209 AFRLLNNDKKQFTWWNYKFGSWQENKGLRIDMLLLSPQAMDKVSSCVVH-------DGLR 261 Query: 288 RGKRLSDHCPISIDYD 303 SDH P+ D + Sbjct: 262 GLNVPSDHVPVVCDLN 277 >gi|89070957|ref|ZP_01158183.1| possible Endonuclease/Exonuclease/phosphatase fa [Oceanicola granulosus HTCC2516] gi|89043464|gb|EAR49678.1| possible Endonuclease/Exonuclease/phosphatase fa [Oceanicola granulosus HTCC2516] Length = 333 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 35/332 (10%), Positives = 84/332 (25%), Gaps = 52/332 (15%) Query: 24 VRLVSWNINTLSEQEGVSL----WKNSVKRT----TSDYTLLRQYAKNLDADIVFLQEMG 75 +R+ ++N+ + + + R L LDAD V + E Sbjct: 1 MRIATYNVEWFASLFDDAGHLLEDDDWSARRDVTRRDQLNALGAVFGALDADAVMVVEAP 60 Query: 76 SYNAVAKVFPKN-TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-------- 126 +A + + + A+ + V Sbjct: 61 DSHARRDGVAALRNFAAHFGLRAREAVMGYVNQTQQEIALLYDPDALEVRHDPLDLGAPR 120 Query: 127 -------SYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYS 178 + A ++ + + + + ++ + + K+ S Sbjct: 121 FDKQLRIDLDIDSAPETVRFSKPPLELAVTTRAGNRLRLIGVHVKSKAPHGARSAAEILR 180 Query: 179 PSCSLLSQQAQW---LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--------- 226 S + +Q L+ + + ++ GDFN F + Sbjct: 181 ISIANRRKQLAQCIWLRRRVEAQLARGDSLIVLGDFNDGPGLDEYEKLFGRSGVEIVLGI 240 Query: 227 ----TIDPNDSLIRFPKEKDSRCNANKNLRNK------IPIDYFVMDQNAYKFLIQESFS 276 + + + +R ++ + +DY ++ + Sbjct: 241 GEELQLHDPHAAAILSRPTLARPSSARFRVPPDGRFLAAMLDYVMVSPDLAARYPAWRIW 300 Query: 277 EILYNEDDIKSRGKR-----LSDHCPISIDYD 303 + R SDH P+S+D D Sbjct: 301 HPFEDPALFADPDLRHALLTASDHFPVSLDLD 332 >gi|302518359|ref|ZP_07270701.1| large secreted protein [Streptomyces sp. SPB78] gi|302427254|gb|EFK99069.1| large secreted protein [Streptomyces sp. SPB78] Length = 612 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 35/329 (10%), Positives = 78/329 (23%), Gaps = 69/329 (20%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQ 72 ++ + ++N+ L + + L DIV ++ Sbjct: 300 SAKPGADDELSVATYNVENLDPTDP-----------QEKFDALADGVVTHLASPDIVSIE 348 Query: 73 EMGSYNAVAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 E+ N V + + + + +I Sbjct: 349 EVQDDNGAKDDGTVSAEQTLRKFTDAIVAAGGPRYAWRGIDPENDKDGGEPGGNIRQVFL 408 Query: 116 VRKKNVRVLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEING 154 V ++ P + + +R+ + G Sbjct: 409 YNPDRVSFTDRAGGEATTATAVVERDGAPALAASPGRVDPANPAWQDSRKPLAGEFVFRG 468 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIA 208 + ++V+ H S L P S + QA + ++ Q + V+ Sbjct: 469 ETVFVVANHFNSKGGDQPLTAAQQPPVRGSETQRHAQAASVNAFVRQLTALDKKARVVVL 528 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 GD N + + E+ N +D ++ + Sbjct: 529 GDLNDFEFSDTTKTLTKGNVLRSGIAQLPADER----YTYVYQGNSQVLDQILVSKGVKS 584 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCP 297 F + + + SDH P Sbjct: 585 FTYDSVHINAEFAQQN--------SDHDP 605 >gi|150398248|ref|YP_001328715.1| exodeoxyribonuclease III [Sinorhizobium medicae WSM419] gi|150029763|gb|ABR61880.1| exodeoxyribonuclease III [Sinorhizobium medicae WSM419] Length = 268 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 33/309 (10%), Positives = 79/309 (25%), Gaps = 71/309 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAV 80 + + +WNIN L+ + K DI+ LQE+ + Sbjct: 2 PLSIATWNIN----------------SVRLRMPLVEHFLKTWQPDILCLQEIKCINDQFP 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + K + + +A + + L +D Sbjct: 46 SAPLRKLGYEYI-----------EMHGQKGYHGVATISRLPL-----HQLSDRRDYCGIG 89 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + ++ GK I + + ++ + D + T +P + + + E Sbjct: 90 DARH-LSVVFAAGGKTIRLHNFYVPAG--GDEPDRTVNPKFGHKLDFVDEM-KLLHAEAE 145 Query: 201 SLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + ++ GD N + + + + + Sbjct: 146 EGISSILVGDLNIAPLEHDVWSHKQLLKIVSHTPIETEGLISVMTGGAWVDLMRRHTPPP 205 Query: 245 CNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + +D+ + L++ +R SD Sbjct: 206 EKLYTWWSYRAKDWAAADRGRRLDHIWSSADLANQLVRVEII-------KEARGWERPSD 258 Query: 295 HCPISIDYD 303 H P+ ++ Sbjct: 259 HVPVIAHFE 267 >gi|237747027|ref|ZP_04577507.1| endonuclease/exonuclease/phosphatase [Oxalobacter formigenes HOxBLS] gi|229378378|gb|EEO28469.1| endonuclease/exonuclease/phosphatase [Oxalobacter formigenes HOxBLS] Length = 264 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 95/302 (31%), Gaps = 64/302 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV-- 80 ++R+ ++NI+ + + + L++ ++L AD++FLQE+ + + Sbjct: 2 ELRIATYNIHKGASIDHRPV-----------IQELKRSIRSLSADVIFLQEVQGRHDLMA 50 Query: 81 ---AKVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 A ++ + + L + K + H A+ V Q S Sbjct: 51 NRHALLWQDQGQHAYLAGSSLYCAYGKNAVYDYGHHGNALLSAYPIVSQ-----YNTDVS 105 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 +R + +++ K++ IHL F +Q L D + Sbjct: 106 DHALESRGILHCVLQTPETKVYCYVIHLGLFNGS-------------RVRQTHALIDTVQ 152 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI-----------RFPKEKDSRC 245 + + P +IAGDFN N L D KT+ + FP+ Sbjct: 153 RSAPNDAPVIIAGDFNDWNNNLS--DLLRKTLRVKEVFDEMAEREERKKSFFPRLTGKVP 210 Query: 246 NANKNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +D + +S + S LSDH P+ Sbjct: 211 KPLPARTFPALFPFFRLDRIYVRG-----FQVDSACVM------QGSPWTALSDHAPLVA 259 Query: 301 DY 302 Sbjct: 260 SL 261 >gi|313680366|ref|YP_004058105.1| exodeoxyribonuclease III xth [Oceanithermus profundus DSM 14977] gi|313153081|gb|ADR36932.1| exodeoxyribonuclease III Xth [Oceanithermus profundus DSM 14977] Length = 252 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 75/304 (24%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L SWN+N L W + LDAD++ LQE+ + Sbjct: 1 MKLASWNVNGLRAALKKGFW---------------DVVRGLDADVLGLQEVRAEEPPELP 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + +AV + + D R Sbjct: 46 EGLGGYRWYWNP----------GDRKGYAGVAVLVRVPPLDVTYGIGHDEFDEEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++ +V++ + + + + L+ Sbjct: 92 -----VITLEYERYYVVNAYFPNAGRGLPRLGYKLAFDQAIENYLEGLRAR--------K 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GD N + + F A Sbjct: 139 GVVLMGDLNVAHREIDIARPKQNQKSAGFTPEERAWIDAFLKKGWIDTFRHLHPDATGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDY ++ ++ L D SDH P+ Sbjct: 199 TWWTYRFNARAKNIGWRIDYILISEDLLPHL-----------MDAYIYYDAYASDHVPVV 247 Query: 300 IDYD 303 D Sbjct: 248 AVLD 251 >gi|126657177|ref|ZP_01728343.1| Exodeoxyribonuclease III xth [Cyanothece sp. CCY0110] gi|126621448|gb|EAZ92159.1| Exodeoxyribonuclease III xth [Cyanothece sp. CCY0110] Length = 262 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 98/306 (32%), Gaps = 71/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ +WN+N + + + N D++ LQE + + Sbjct: 1 MKIATWNVN----------------SIRTRKPHVVDWLTNNSIDVLCLQETKVIDQDFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F + + ++ ++ N AI R+ V+ P++G + + Sbjct: 45 EPFEELGYHVYIYGQKAYN----------GVAIFSRQPMTDVITGFTPMVGEEIAQQFDE 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKE 200 +R + +++ I ++++++ + + S + Y Q + LK ++ K+ Sbjct: 95 QKRVISGVID----GIRIINLYVPNGASVGSEKYEYK------LQWFKVLKAYLDNLIKK 144 Query: 201 SLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 I GDFN + + + I F K Sbjct: 145 ESYELCICGDFNIALEDKDIYNSKGKENHIMSSPLEREALEKILKIGLKDAFRKFTTEGG 204 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + ID+ + Y+ + + ++ R SDH Sbjct: 205 H-FSWWDYRSGGLQRNRGWRIDHLYLTNKLYEKAVNCTIDIEPRKQE-------RPSDHT 256 Query: 297 PISIDY 302 P+ ++ Sbjct: 257 PVILEI 262 >gi|119484378|ref|ZP_01618995.1| Endonuclease/exonuclease/phosphatase [Lyngbya sp. PCC 8106] gi|119457852|gb|EAW38975.1| Endonuclease/exonuclease/phosphatase [Lyngbya sp. PCC 8106] Length = 331 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 100/304 (32%), Gaps = 46/304 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------ 75 + ++++NI LS K + L K +AD + LQE+ Sbjct: 52 ETYTVITYNIGYLSGLTNNQAVKREKVLFDENLELAIAALKPFNADFIALQEVDFASQRS 111 Query: 76 -SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-------TAIAVRKKNVRVLQQS 127 N V ++ + + + N+ I+ + A+ + L + Sbjct: 112 YDVNQVQELATALKFPVQATAINWDNNYVPFPTFPIYAHFGKMLSGQAILSRYPIELNER 171 Query: 128 YPLLGAKDSFSRAGN----RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L + R A ++I + ++++HL++F Sbjct: 172 IVLEQVTNKPFYENAFYLDRLAQVSRIKIANHILILINVHLEAF------------DQPT 219 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-TIDPNDSLIRFPKEK- 241 +Q+Q++ + P ++ GDFN + N + ++ FP + Sbjct: 220 RLKQSQFVLELFLSF-SQKYPVLLIGDFNSEPPSEINLEPTINLFLNTPGIQSAFPPKTL 278 Query: 242 -DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + IDY +QN + + + ++IL SDH P+ + Sbjct: 279 NHPENGTYPSDQPHRTIDYIFYNQNKIEAIEWQVVTDIL------------ASDHLPVVM 326 Query: 301 DYDF 304 + F Sbjct: 327 KFRF 330 >gi|15966954|ref|NP_387307.1| putative exodeoxyribonuclease III protein [Sinorhizobium meliloti 1021] gi|307301727|ref|ZP_07581486.1| exodeoxyribonuclease III [Sinorhizobium meliloti BL225C] gi|307316249|ref|ZP_07595693.1| exodeoxyribonuclease III [Sinorhizobium meliloti AK83] gi|15076227|emb|CAC47780.1| Putative exodeoxyribonuclease III [Sinorhizobium meliloti 1021] gi|306898089|gb|EFN28831.1| exodeoxyribonuclease III [Sinorhizobium meliloti AK83] gi|306903425|gb|EFN34014.1| exodeoxyribonuclease III [Sinorhizobium meliloti BL225C] Length = 268 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 33/308 (10%), Positives = 79/308 (25%), Gaps = 69/308 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + + +WNIN L+ + K DI+ LQE+ N Sbjct: 2 PLSIATWNIN----------------SVRLRMPLVEHFLKTWQPDILCLQEIKCRND--- 42 Query: 83 VFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + R + + + +A + Sbjct: 43 -------QFPSAPLRKLGYEYIEMHGQKGYHGVATISRLPLHELSDRRDYCGVGDARH-- 93 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++ GK I + + ++ + D + T +P + + + E+ Sbjct: 94 ----LSVVFAAGGKTIRLHNFYVPAG--GDEPDRTVNPKFGHKLDFVDEM-KLLHAEAEA 146 Query: 202 LVPFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRC 245 V ++ GD N + + ++ K + + + Sbjct: 147 GVSSILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETEGLVSVMTGGAWVDLMRRHAPPPE 206 Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ + L++ +R SDH Sbjct: 207 KLYTWWSYRAKDWTAADRGRRLDHIWSSADLASQLVRVEI-------LKEARGWERPSDH 259 Query: 296 CPISIDYD 303 P+ ++ Sbjct: 260 VPVIAHFE 267 >gi|296444974|ref|ZP_06886936.1| Endonuclease/exonuclease/phosphatase [Methylosinus trichosporium OB3b] gi|296257642|gb|EFH04707.1| Endonuclease/exonuclease/phosphatase [Methylosinus trichosporium OB3b] Length = 325 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 42/321 (13%), Positives = 95/321 (29%), Gaps = 46/321 (14%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78 + RLVS+N L L R ++LR + ADI+ LQE+ + Sbjct: 2 SAPFRLVSFNTENLDWSPAGEL------RFKRRLSVLRPLLAAVAADILCLQEVDAQRPT 55 Query: 79 --------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 A+ ++ + F + + + AI R V Q + + Sbjct: 56 PHAPRRFIALDRLVAGTAYEGF-ARATSRRPGTDAPADVHNLAILSRWPIVATRQLHHDI 114 Query: 131 LGAKDSFSRA-----------GNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYS 178 + A +R A+ + + VL++HL++ + + + Sbjct: 115 VAPWRWTPPAGRGVAAPIEIVFDRPALYARIAPPHGPELHVLNLHLRAPRAVPLPGTSGA 174 Query: 179 P-----------SCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFW 225 + QA + ++ + + GDFN + + Sbjct: 175 RSGPVFAEGQFLAAQKREGQALETRLFVDALFDDDKDASIAVCGDFNSESHDAPARILRG 234 Query: 226 KTIDPND----SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + + + +S + + + +D+ ++ + + Sbjct: 235 AAEEDAEAPFALTALAERLAESARYSVIHAGRRTLLDHILVSRALAARCARVEIMNEGLA 294 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 ++ S H PI + Sbjct: 295 DEATAPDPILGSLHAPIMASF 315 >gi|260887970|ref|ZP_05899233.1| exodeoxyribonuclease III [Selenomonas sputigena ATCC 35185] gi|330838548|ref|YP_004413128.1| exodeoxyribonuclease III [Selenomonas sputigena ATCC 35185] gi|260862221|gb|EEX76721.1| exodeoxyribonuclease III [Selenomonas sputigena ATCC 35185] gi|329746312|gb|AEB99668.1| exodeoxyribonuclease III [Selenomonas sputigena ATCC 35185] Length = 250 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 76/303 (25%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R VSWN+N L G ++ K LDAD+ +QE + Sbjct: 1 MRFVSWNVNGLRACLGKGFMQS---------------FKALDADVFGVQETK-MQPEQAI 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++++ + + AV + + + D R Sbjct: 45 LELTGYKQYWNSAEKKGY----------SGTAVFSRIEPLSVSYGLGIEEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++ + ++ + L ++ Sbjct: 91 -----VIALEFDDLYFVTVYTPNSQRGLERLAYRMTWEEAFRDYLLAL--------DAKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + F + Sbjct: 138 PVVVCGDLNVAHTEIDLKNPKTNRKNAGFTDEEREKMTELLAAGFTDTFRALYPDKTGIY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ + + + ++ SDHCP+ Sbjct: 198 TWWSYLRKARETNAGWRIDYFLVSDRLAPKIKEATIHNEVF-----------GSDHCPVG 246 Query: 300 IDY 302 + Sbjct: 247 LVL 249 >gi|218898840|ref|YP_002447251.1| exodeoxyribonuclease III [Bacillus cereus G9842] gi|218542018|gb|ACK94412.1| exodeoxyribonuclease III [Bacillus cereus G9842] Length = 252 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 84/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + +Y + +ADI LQE+ + + Sbjct: 1 MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKVQSGQIDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + ++ A+ K + + D R Sbjct: 47 NLEGYYTYW-----------NYAVKKGYSGTAIFTKKEPLSVTYGLEIEEHDQEGRL--- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +++ ++ + + + L + Sbjct: 93 ------ITLEFEDFYMITLYTPNSKRGLERLDYRMKWEDDFRSYIKRL--------DEKK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + I + + + A Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTCILEEGFIDTYRYLYSDQEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV+ + + + + + SDHCP+ Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEV-----------MGSDHCPVE 247 Query: 300 IDYDF 304 + +F Sbjct: 248 LHINF 252 >gi|146276446|ref|YP_001166605.1| endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides ATCC 17025] gi|145554687|gb|ABP69300.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides ATCC 17025] Length = 339 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 42/338 (12%), Positives = 103/338 (30%), Gaps = 56/338 (16%) Query: 21 AQKVRLVSWNINTLS----EQEGVSLWKNSVKRTT----SDYTLLRQYAKNLDADIVFLQ 72 Q++R+ ++N+ + ++ + R + L LDAD + + Sbjct: 2 GQRLRIATYNVEWFNALFDDRGRLLADNELSGRYEITRRNQIESLGIVFTALDADAIMVI 61 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E ++ + E + + N+ IA+ R+ + P G Sbjct: 62 EAPNHGRRRSTVKALE-TFARTFELRASQAIMGFANETDQEIALLFDPSRIEARHDPQAG 120 Query: 133 AKDSFSR----------------AGNRRAVELLVEINGKKIWVLDIHLKS--FCFLDSLE 174 K ++ +EL V +G + ++ +H KS + Sbjct: 121 PKAPRFDGIFRFDIDVDAAPEAIRFSKPPLELAVRADGHALRLIGVHAKSKAGRGARNGA 180 Query: 175 NTYSPSCSLLSQQAQ---WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF------- 224 + QQ W++ + ++ GDFN F Sbjct: 181 EEVRIAIQNRRQQLAECVWIRRRVAALLARHQSVMVMGDFNDGPGLDEYEKLFGHSGVEI 240 Query: 225 ---------WKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYK-- 268 + +P+ + + +A + +D+ ++ + + Sbjct: 241 VLGLDEPPELRLHEPHARMALTQRVGVQPSSARFWLAPEDQYFEALLDFIMISPDLAEKG 300 Query: 269 --FLIQESFSEIL-YNEDDIKSRGKRLSDHCPISIDYD 303 + I ++ + +++ SDH P+++D + Sbjct: 301 PRWRIWHPLNDPNCFRIPELQEALLAASDHFPVTLDIE 338 >gi|257455364|ref|ZP_05620599.1| exodeoxyribonuclease III [Enhydrobacter aerosaccus SK60] gi|257447326|gb|EEV22334.1| exodeoxyribonuclease III [Enhydrobacter aerosaccus SK60] Length = 270 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 89/310 (28%), Gaps = 76/310 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 R VS+NIN L + +R D++ LQE ++ Sbjct: 3 RFVSFNINGLRARPH-------------QLEAIRDIIA---PDVIGLQETKVHDDA---- 42 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + + + + H +A+ + + Q + D+ RR Sbjct: 43 ------FPLQSVQQLGYHVEFFGQKSHYGVALLSRQKPIFVQKGFPTDSDDA-----QRR 91 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + + NGK I VL+ F + + + L D+I Q K Sbjct: 92 FIHARYDFNGKYIDVLN-----GYFPQGENRKHETKFPMKRKFYADLTDYILQLKAENRS 146 Query: 205 FVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 ++ GD N ++L ++++ + D + + + Sbjct: 147 MILMGDMNIAPLDFDIGISEDSVKRWLKNGTCSFLPEEREWYQALLATDLHDTY-RALYA 205 Query: 244 RCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 A + ID+ +M + L ++ Sbjct: 206 DGQALSWFDYRSKGFDDEPKRGLRIDHILMTPDLADKLNGAGV-------SYDLRAMEKP 258 Query: 293 SDHCPISIDY 302 SDH PI D+ Sbjct: 259 SDHAPIWADF 268 >gi|170782608|ref|YP_001710942.1| hypothetical protein CMS_2268 [Clavibacter michiganensis subsp. sepedonicus] gi|169157178|emb|CAQ02359.1| conserved hypothetical protein [Clavibacter michiganensis subsp. sepedonicus] Length = 273 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 41/291 (14%), Positives = 93/291 (31%), Gaps = 37/291 (12%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--G 75 + + L+S N+ + +R L ++ + ++ +QE Sbjct: 7 PTTGDDIHLISLNVRMPWHGTREGEADHWPERQEV----LTRFLQQERPTVLGVQEALWP 62 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 A+ K P ++ + +H + + + + + + +V L P + Sbjct: 63 QIQAIEKALP-PSYRMVGQGREGGSHGEHGAIFYQASRLTLLEHDVMWL-SDTPDVIGSM 120 Query: 136 SFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 ++ R + G + VLD HL + + + ++ A Sbjct: 121 TWGNPMPRILTWARFQDEATGHPLVVLDTHLDHDVAEARDRAAEAIAELVRTRFA----- 175 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 +P V+ GDFN ++ D + DS + ++ + R Sbjct: 176 --------GLPLVLMGDFNAPVDS-FPYDALTRRAGLRDSWLDTARQATPAFGTFPDYRP 226 Query: 254 KI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ + +D RG+ +SDH P+ Sbjct: 227 PVVGAPRIDWILVSER---------VDVRAAAVNDFTWRGRMMSDHLPVQA 268 >gi|154251747|ref|YP_001412571.1| exodeoxyribonuclease III Xth [Parvibaculum lavamentivorans DS-1] gi|154155697|gb|ABS62914.1| exodeoxyribonuclease III Xth [Parvibaculum lavamentivorans DS-1] Length = 268 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 30/309 (9%), Positives = 73/309 (23%), Gaps = 73/309 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAV 80 +++ +WNIN L+ + D++ LQE+ + Sbjct: 2 DIKIATWNIN----------------SVRLRINLVERLIAEESPDVLCLQEIKCINDAFP 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K + + +A + S D Sbjct: 46 LKALKAAGYEHIAV-----------HGQKGYHGVATLSRIPFKKVDSMNFCEKGDCRH-- 92 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK-K 199 + +++ G + V + ++ + D + +P + + + Sbjct: 93 -----LATDLDMPGG-MRVHNFYVPAG--GDEPDPEINPKFAHKLAFVREMTRLYDGHRT 144 Query: 200 ESLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 +S V+ GD N + + I +D + + Sbjct: 145 KSQNRMVLVGDLNIAPLEHDVWSHKQLLKVVSHTPVEVALMNELIASHDWVDVMRRFVPD 204 Query: 244 RCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + +D+ + + + +R S Sbjct: 205 NEKLYSWWSYRAKDWLAADRGRRLDHIWVTPALADTPVSMTVR-------KDARGWERAS 257 Query: 294 DHCPISIDY 302 DH P+ Sbjct: 258 DHAPVVATL 266 >gi|229691|pdb|1ATN|D Chain D, Atomic Structure Of The Actin:dnase I Complex Length = 260 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 91/285 (31%), Gaps = 30/285 (10%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-- 81 +++ ++NI T E + + + + + DIV +QE+ + VA Sbjct: 1 LKIAAFNIRTFGET---------KMSNATLASYIVRIVRRY--DIVLIQEVRDSHLVAVG 49 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K+ + +++ ++ R V VL G + + + Sbjct: 50 KLLDYLNQDDPNTYHYVVSEPLGRNSYKERYLFLFRPNKVSVLDTYQYDDGCGNCGNDSF 109 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R + + K+ I D++ S L Q +W + Sbjct: 110 SREPAVVKFSSHSTKVKEFAIVALHSAPSDAVAEINSLYDVYLDVQQKWHLN-------- 161 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 ++ GDFN +Y+ ++ + + + + + N D V Sbjct: 162 --DVMLMGDFNADCSYVTSSQWSSIRLRTSSTFQWLIPDSADTTATSTNCAY----DRIV 215 Query: 262 MDQNAYKF-LIQESFSEILYNEDDIKSR--GKRLSDHCPISIDYD 303 + + + ++ S + + S +SDH P+ + Sbjct: 216 VAGSLLQSSVVPGSAAPFDFQAAYGLSNEMALAISDHYPVEVTLT 260 >gi|301057309|ref|ZP_07198427.1| endonuclease/exonuclease/phosphatase family protein [delta proteobacterium NaphS2] gi|300448539|gb|EFK12186.1| endonuclease/exonuclease/phosphatase family protein [delta proteobacterium NaphS2] Length = 258 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 96/286 (33%), Gaps = 37/286 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R++++N+ ++Q+G + W L+ + + DI+ QE Sbjct: 1 MRVMTFNLRFENDQDGANAWSC-------RRDLVVKLIERYAPDILGTQEGRISPLAYLD 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + I + + + + + + L ++ P + + A R Sbjct: 54 AHLTKYDIHMPSRVIDKTCQYPTLFFRRDRFRILEGKEFWLSKT-PGIHRSKDWDSAFPR 112 Query: 144 RAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E+ +G+ V HL + +QA+ + W+ + Sbjct: 113 MVSTATLELRESGRIFSVAVTHLDHMGQ------------TARLKQAEIISRWVRE---K 157 Query: 202 LVPFVIAGDFNRKINYLGNNDDF--WKTIDPNDSLIRFPKEKDSRCNANKNL-RNKIPID 258 VP ++ GDFN + + + ++ + K+S + K ID Sbjct: 158 TVPVILMGDFNDGPHSDAHAVLASSQTGLSDVWQVLGHAEGKESFTHHGFTGVPKKSRID 217 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + + + ++ G+ SDH P +D+ + Sbjct: 218 WILSSK--PPYAVDARLLHDQFD-------GRYPSDHFPYYVDFTW 254 >gi|319782958|ref|YP_004142434.1| endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168846|gb|ADV12384.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 370 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 46/367 (12%), Positives = 103/367 (28%), Gaps = 86/367 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVK----------------RTTSDYTLLRQ------- 59 +RL ++N+ L + S ++N + R + Q Sbjct: 2 SLRLATFNVENLMNRFDYSGYRNQLNEDRTLALFDIQSEAEYRMLEQARAIAQSDDTRQL 61 Query: 60 ---YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 ADI+ +QE+ + A+ + + R + + + I A+ + Sbjct: 62 TALAIAATRADIICMQEVDNIEALKAFEYGYLFKMVGQGYRQKYTTSGNDSRGIDVAVMM 121 Query: 117 R------KKNVRVLQQSYPLLG--------------AKDSFSRAGNRRAVELLVEINGKK 156 R + V S+ + + R R +E+ V + G Sbjct: 122 RNETAQGQPIEFVRMTSHAYVTYEQFGLHTPELEALGNQANERIFRRDCLEIDVTVGGVP 181 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV----PFVIAGDFN 212 + + +H KS + + + + +AQ ++ I ++ + I GD N Sbjct: 182 LTLYLVHFKSMGSPRNGLDGREATMPVRIAEAQAVRRIIEERFGKDYAADKRWAICGDMN 241 Query: 213 RKINYLGNNDDF---------------WKTIDPNDS-LIRFPKEKDSRCNANKNLRNKI- 255 + D + + + + + R Sbjct: 242 DYRQRVKVAGDAIDGYRFEVVDEALSCINVLTAGGFCENVVERRPEMNRWSFYHTRGPEE 301 Query: 256 ----PIDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHC 296 +DY ++ + + + + + SDHC Sbjct: 302 RHLCQLDYILLSKGLAASNATAVPDIIRNGQPWRTIFPPGQEVDRFPRAGWDRPKASDHC 361 Query: 297 PISIDYD 303 P++I D Sbjct: 362 PVAITLD 368 >gi|313610961|gb|EFR85889.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes FSL F2-208] Length = 273 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 75/285 (26%), Gaps = 35/285 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + ++NI K TL + D + ++E + Sbjct: 19 FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEEPLLPQMLDMK 71 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + W F + ++ + P + + S + R Sbjct: 72 AMLD-WDYFGVGRDDGLEKGEFTAVFYNSTRFTLLQEGHFWLSDTPDVPSIHSTAM-FPR 129 Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V + +GK+ ++ + HL A L Sbjct: 130 ICVWGEFADSDGKQFYIFNTHLDHIS-------------EEARLFASQLLLKKAATIAKD 176 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDY 259 P +I GDFN + N N K D + K + LR IDY Sbjct: 177 SPVIILGDFNTQPNTPTYNYITEKYQDAQLISQKPAKGPTGSFHDFHPLRPENELEKIDY 236 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + F Y + G SDH P++ + D+ Sbjct: 237 IFVSNE---------FQVSTYETIVDEVEGFSASDHFPVTANLDW 272 >gi|258653319|ref|YP_003202475.1| exodeoxyribonuclease III Xth [Nakamurella multipartita DSM 44233] gi|258556544|gb|ACV79486.1| exodeoxyribonuclease III Xth [Nakamurella multipartita DSM 44233] Length = 264 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 83/304 (27%), Gaps = 68/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WNIN + + + + + D D++ +QE +A Sbjct: 1 MRIATWNIN----------------SIRARHDRVLAWLERSDVDVLAIQETKIDDA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ + Q +G D + + Sbjct: 41 ------RFPVESFERLGYRVAHHGTNQWNGVAIASRVGLDDVQ----VGVPDLPAFGEDP 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK--ES 201 + + V +++ + +D Y L+D+ ++ E Sbjct: 91 AVEARSLGALCGGVRVWSLYVPNGRAVDDPHYHYK------LHWLAVLRDYAAKQLADEP 144 Query: 202 LVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246 +P ++ GDFN + + Sbjct: 145 HLPMLLCGDFNIAPTDDDIWSVEYYQGSTHVTGPERQAFANLTDAGFTDVVRPFHPGPGV 204 Query: 247 ANKNLRNK--------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + ID+ + + D + +GK SDH P+ Sbjct: 205 YTYWDYTRLSFPKRRGMRIDFALASPALAARVTDAQI-------DREERKGKGSSDHAPV 257 Query: 299 SIDY 302 +++ Sbjct: 258 IVEF 261 >gi|170739969|ref|YP_001768624.1| endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46] gi|168194243|gb|ACA16190.1| Endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46] Length = 1795 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 37/341 (10%), Positives = 82/341 (24%), Gaps = 77/341 (22%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-QYAKNLD-ADIVFLQEMGSYN 78 A + + S+N L +G + + + + L+ D++ LQE+ + Sbjct: 1001 ADHLLVASYNAENLDPTDGA-----------ARFAAIASEVLGRLNTPDVIALQEVQDDD 1049 Query: 79 A--------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + + + + + + +I TA R Sbjct: 1050 GPGNTASTVTSAGRTFRLVVEAIRAAGGPDYAFIDNPYIGDDTNGGEPGGNIRTAFLYRT 1109 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGN---------------RRAVELLVEINGKKIWVLDIH 163 V + + + S AG R + N + + V+ H Sbjct: 1110 DRVSLAPNAVRSIAPDGSPITAGPSADQQTNPDNPFYASRPPLAADFVFNDETVTVVSNH 1169 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK------KESLVPFVIAGDFNRKINY 217 S +L + P + ++AGD N Sbjct: 1170 FTSKGGSGALFGSEQPPFDAGQLARAAQAQAVNSFVDGILAASPRARVLVAGDLNDFGFE 1229 Query: 218 LGN----NDDFWKTIDPNDSLIRFPKE------------KDSRCNANKNLRNKIPIDYFV 261 + + + F + + + N +D+ + Sbjct: 1230 EPLSVLKGEATLAGYTRAGTGVTFTRGGTAVLSDLQDTLPEGQRYDYVFEGNSETLDHVL 1289 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + E + SDH P+ Sbjct: 1290 VTDALAAGVQFEPVHI-------NADFFDQTSDHDPLLARL 1323 >gi|330961652|gb|EGH61912.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 379 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 45/342 (13%), Positives = 96/342 (28%), Gaps = 76/342 (22%) Query: 11 FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53 C +V Q +++++WNI L+ + + + + Sbjct: 52 LLAATCNPAVQAPKLVPGQALKVMTWNIQYLAGKRYVFWYDIADGSGPDDRPTPEDLAYN 111 Query: 54 YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99 + + ++ DIV LQ + + ++P +T ++ E + Sbjct: 112 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYQDQLKLLEERLIDLYPCSTQAFYWKAEFVP 171 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKI 157 N S A R + P+ A + R A+ + +G K+ Sbjct: 172 NPHIWGS-VGRKLATLSRFHIDSAERLQLPVPDANLISRQFQPRNALLVSYLPLRDGGKL 230 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-- 215 V++ L + + +Q + + + + P++I GDFN Sbjct: 231 AVINTSLTTAKRDGAA-----------QKQIAATETLLDKLEGGGTPWLIGGDFNLLPLG 279 Query: 216 --------------NYLGNNDDF--WKTIDPNDSLIRFPKEKDSRCNANKNL--RNKIPI 257 + + + I N + K N + + Sbjct: 280 QYQRLPEPQRLGYAADSELHKLWEKYPMIPSNAESSGIDRSKWLTRFPNDSRINGPDRTV 339 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 DY + S + +SDH P+ Sbjct: 340 DYLFYSPALKR----VSARVRRDDTLL-------ISDHLPVI 370 >gi|294139368|ref|YP_003555346.1| hypothetical protein SVI_0597 [Shewanella violacea DSS12] gi|293325837|dbj|BAJ00568.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 365 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 39/362 (10%), Positives = 92/362 (25%), Gaps = 73/362 (20%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIV 69 ++ + ++++ S+N+ + + ++ + +Y D++ Sbjct: 1 MLSTHSDSHYQLKIASFNLFNFIAPPDAFYEFDNIYTQEQWQKKLDWITKYLNEHQPDVI 60 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN---VRVLQQ 126 QE+ S + + + ++ + A+A R V V Sbjct: 61 GFQEVFSPDELQSLTKSCGLD-YFCVLDSPQVMDDFIYSKPVVALASRYPIKQAVSVNAD 119 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIW---VLDIHLKSFCFL---------DSLE 174 +R+ + VE+ + V+ K F Sbjct: 120 PGWAAKMGLESEFEFSRKPLRATVELPKLGLCDCYVVHFKSKRTLFDVQQSKAGSYTGSV 179 Query: 175 NTYSPSCSLLSQQA---QWLKDW-----------------ITQKKESLVPFVIAGDFNRK 214 S + L Q + L W + ++ ++ P ++ GDFN Sbjct: 180 KETSSAAELNIGQLLAVEALGQWGSSIQRGSEAALLRYAMVERRSQTQNPMILMGDFNDI 239 Query: 215 INYL--------------------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ + F++ D D + Sbjct: 240 LSDGVLAALTSVDTRIKPQTVIGQGAMGDVAHQLGFYRLQDAYDLYQASQYSLSEQARPA 299 Query: 249 KNLRN--KIPIDYFVMDQNAYKFLIQESFSEILYNEDDI------KSRGKRLSDHCPISI 300 + +DY ++ Y D + +DH P+ I Sbjct: 300 THYFFAKGSVLDYILLSSEFDAKNDLSLAEVGRYETYDRHLINPSFEHDSQSTDHAPVMI 359 Query: 301 DY 302 Sbjct: 360 SL 361 >gi|167587042|ref|ZP_02379430.1| Endonuclease/exonuclease/phosphatase [Burkholderia ubonensis Bu] Length = 284 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 82/305 (26%), Gaps = 46/305 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 +RL+ WNI + +GV + + D D++ LQE+ Sbjct: 1 MRLIDWNIQWGRDADGVVDLPRT----------IAAARGLGDFDVLCLQEVTRGFGALAG 50 Query: 75 -GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + A++ A+ + L Sbjct: 51 HPEPDQFAELAALLPGFTVVEAIGADLPPTAPGAPRRQFGNAIASRLPVGRVMRRLLPWP 110 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF------LDSLENTYSPSCSLLSQQ 187 D + + R A+E+ + + V HL+ + +D+L + + +C+ + Sbjct: 111 ADDAAPSMPRVALEVELATASGPLRVTTTHLEYYSARQRLAQVDALHDRHREACAHADRP 170 Query: 188 AQW-LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-----WKTIDPNDSLIRFPKEK 241 A+ D ++ GDFN + + + Sbjct: 171 ARAEHADSPFSATAQPRDAIVCGDFNSAYDSDAYRRFLEPVEGAPRFVDAWAALHPGAAP 230 Query: 242 DSRCNAN---KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + D+ + + + R SDH PI Sbjct: 231 PPTAGIYDTVQWSEGPLACDFVFVTDTLLPRVARCEI-----------DGDLRASDHQPI 279 Query: 299 SIDYD 303 ++ + Sbjct: 280 VLELN 284 >gi|29832889|ref|NP_827523.1| large secreted protein [Streptomyces avermitilis MA-4680] gi|29610010|dbj|BAC74058.1| putative large secreted protein [Streptomyces avermitilis MA-4680] Length = 608 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 38/326 (11%), Positives = 84/326 (25%), Gaps = 66/326 (20%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++ + ++N+ L + + ++ DIV L+E+ N Sbjct: 302 GELAVATYNVENLDPSDATFAD---------HAAAIVNNLQS--PDIVSLEEIQDNNGAT 350 Query: 82 K-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 V + S + + + + +I V Sbjct: 351 DDGTVAADQTVRKLIDAIVAAGGPAYEWRSIDPVNDKDGGEPGGNIRQVFLFNPDRVSFT 410 Query: 125 QQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 ++ P + +R+ + G+ ++V+ H Sbjct: 411 DRAGGDSTTAVGVTKVRGKAQLTVSPGRIDPSDAAWNSSRKPLAGEFVFRGRTVFVIANH 470 Query: 164 LKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINY 217 S L Y P S + QA + ++ + + GD N Sbjct: 471 FASKGGDQGLAAQYQPPARSSETQRHLQATAVNAFVKDVLDTQKNADVIALGDMNDF--- 527 Query: 218 LGNNDDFWKTIDPNDSLIRFPKE-KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 D K ++ + L K S N +D ++ + Sbjct: 528 --EFSDTAKILEGDGELWSAIKSLPKSERYTYDYQGNSQVLDQILVSPSIR-----RGCD 580 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302 + ++SDH P + + Sbjct: 581 VDYDSVHLNSEFSDQVSDHDPQVLRF 606 >gi|32471949|ref|NP_864943.1| hypothetical protein RB2435 [Rhodopirellula baltica SH 1] gi|32397321|emb|CAD72627.1| conserved hypothetical protein [Rhodopirellula baltica SH 1] Length = 358 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 41/346 (11%), Positives = 93/346 (26%), Gaps = 45/346 (13%) Query: 1 MIRKYVLALVFFLVPCT-----ASVAQKVRLVSWNINTLSEQEGVSLWK--------NSV 47 M ++LAL + A + +++WN+ + + S Sbjct: 11 MRLLFLLALTGHFISGFGSVAIAQQPTEFSVMTWNLEWFFDNQTADNPSELGREKSAPSR 70 Query: 48 KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107 + + + +V LQE+ S N + + + D Sbjct: 71 GQWDWRRDRVAAAIAKVQPTVVALQEIESQNVTYFLTRAIDRNHGLKYDDYV-IKGEDFY 129 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKS 166 + A+ + + S A + + +VEI K +L I Sbjct: 130 TEQDVALLATTTTGVQSISRGVVTPSMKSRGYASVSKHLFAVVEIPVNGKTELLVIANCH 189 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWIT---QKKESLVPFVIAGDFNRKI------NY 217 + + + L + L + + + V ++ GDFN + Sbjct: 190 LRAMAKKGDLRAKQARTLGLWLERLVAGVKASQENPDQPVHVLVTGDFNTEELAGKISPD 249 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA---YKFLIQES 274 + D + + N +L D ++ ++ ++ S Sbjct: 250 SDLGVLMSRGNDDPSDDLVDLHDYIPDQNRTTHLLPGRQFDRILVSRDLVIDTPGVVDLS 309 Query: 275 FSEILYNEDDIK------------------SRGKRLSDHCPISIDY 302 ++ D + +SDH P+ + Sbjct: 310 LRDVTVRSDLNFGGDQDTQDEHWNNYWGIADDQRDISDHNPVLARF 355 >gi|290959609|ref|YP_003490791.1| hypothetical protein SCAB_52121 [Streptomyces scabiei 87.22] gi|260649135|emb|CBG72249.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 295 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 82/306 (26%), Gaps = 56/306 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------- 76 +R+V+WN+ + + L D V LQE+ Sbjct: 1 MRVVTWNLWWRFGP------------WQERQKAILAVLRELRPDAVGLQEVWQRGGGTGR 48 Query: 77 -----YNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 N + + + +R ++D+ AV + + + L Sbjct: 49 DGGGGDNLAGWLAGELGMHWAWGEYGDAGRWQRRIGDSDVGIGGAVLSRWPVRERDAIAL 108 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 R A+ L++ G + HL S + + ++ +Q Sbjct: 109 PAGDGGS----TRGALYALLDAPGAPVPFFTAHLSS----------ATDASAVRCRQVTA 154 Query: 191 LKDWITQKK-ESLVPFVIAGDFNRKINYLG-------------NNDDFWKTIDPNDSLIR 236 L ++ + + P VI GDFN + F+ + + Sbjct: 155 LAGFVARHRGGHAHPSVITGDFNAWPDSDEVRLFGGYRTAPAVPGQCFFDAWEYAEPGAP 214 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + + +DY + + + G SDH Sbjct: 215 SATWDLANPYVAGSFGPSVRVDYIHV---GPPGPGGLGHVRAVRRAGEGPVGGVWPSDHL 271 Query: 297 PISIDY 302 + D Sbjct: 272 AVVADL 277 >gi|254420582|ref|ZP_05034306.1| exodeoxyribonuclease III (xth) subfamily [Brevundimonas sp. BAL3] gi|196186759|gb|EDX81735.1| exodeoxyribonuclease III (xth) subfamily [Brevundimonas sp. BAL3] Length = 265 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 36/307 (11%), Positives = 78/307 (25%), Gaps = 70/307 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +RL +WNIN + ++ D++ LQE+ Sbjct: 2 TLRLATWNIN----------------SVRLRIDQVARFVAERAPDVLLLQEIKCTTD--- 42 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + E + R + +A+ + ++ + + Sbjct: 43 ------QFPRAAFEDMGMPHLRVAGQKGWHGVAIASRLPLEDSDTFQVCKLGHARC---- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V I V + ++ + D + T +P + L + ++ + Sbjct: 93 -------VSAQVAGIDVQNFYIPAG--GDVPDRTLNPKFDHKMDFYEQLTAIVARQ-DKS 142 Query: 203 VPFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCN 246 P V+AGDFN + + Sbjct: 143 RPLVMAGDFNIAPGEGDVFNHRYMSKIVSHTPIEVETLNRLQATGGFADVLRDRFPEPQK 202 Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ + +++ D R SDH Sbjct: 203 LASWWSYRAADFRKSNRGLRLDHIWTSPGLTPAVAKDTAR-----IHDDVREWDRPSDHA 257 Query: 297 PISIDYD 303 P+++D D Sbjct: 258 PVTVDLD 264 >gi|317401442|gb|EFV82074.1| hypothetical protein HMPREF0005_00913 [Achromobacter xylosoxidans C54] Length = 288 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 89/324 (27%), Gaps = 85/324 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+VS+NI+ S LR L D+VFLQE+ N + Sbjct: 4 IRVVSYNIH----------KGRSALGRRDSLNELRLGLYGLRPDLVFLQEVQGRNEQKSL 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + + ++ A+ + + + S R R Sbjct: 54 LDAQHESLAAALKLDVAYGRNAIRHETDHGNALLSRFPILDHE-----NQDISDHRLEQR 108 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E++G+ + +HL F S+Q L + I + Sbjct: 109 GLLHATIELDGRSVHCFVVHLGLFAGS-------------RSRQILALTERIRRMVPDGE 155 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-------------------- 243 P +IAGDFN + L F + + + P+ Sbjct: 156 PILIAGDFNDWGDRLAP--LFVQQLGLYEVFSHAPRSHGGELPRLRDSVKRLSNALRGLP 213 Query: 244 ------------------------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 + +D + S + Sbjct: 214 NSGVSVLERTNQLGMDGSSRLLLPPPRTFPAVFPWFRLDRIY-----QRGFAVRSARVLR 268 Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303 RLSDH P+ + + Sbjct: 269 ------GREWARLSDHSPLLAELE 286 >gi|224538615|ref|ZP_03679154.1| hypothetical protein BACCELL_03509 [Bacteroides cellulosilyticus DSM 14838] gi|224519749|gb|EEF88854.1| hypothetical protein BACCELL_03509 [Bacteroides cellulosilyticus DSM 14838] Length = 335 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 32/341 (9%), Positives = 85/341 (24%), Gaps = 57/341 (16%) Query: 1 MIRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKN-----------S 46 M + L ++ V + + + +N+ L + + + + Sbjct: 1 MKKLLFLISLWLCVTTAGAQQNERDLYSVAFYNLENLFDTIHDAGKNDLEFLPSGSYAWT 60 Query: 47 VKRTTSDYTLLRQYAKN-------LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99 ++ + L + ++ + E + + + + + Sbjct: 61 AEKYEAKLKNLAKVLSEVSRDRVPEGPAVIGVAEAENNRVLTDLVSQPAISNYKFVHYEG 120 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + I A+ + V L + + R + + ++ G+++ Sbjct: 121 PDKR-----GIDCALLYDPEQFTVTNSKLVLSTPFEGDTVHLTRGFLIVDGQMAGERVCF 175 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 + H S SP ++Q + L D + + + + ++ GD N Sbjct: 176 IVNHWPSR-------GAKSPVRVHAAKQVRALTDSLMRT-DKKLKLIVMGDMNDDPMDES 227 Query: 220 N-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK------ 268 + + +D D V+ + K Sbjct: 228 MATLGARKYAKQVKKGEFYNPWWETLEDKGVGTLLYRGKWNLFDQIVVSRPLLKAKKGLK 287 Query: 269 ------------FLIQESFSEILYNEDDIKSRGKRLSDHCP 297 F + + SDH P Sbjct: 288 YDHNEVFIREYLFQQDGKYKGSPLRTHGGRVWLNGYSDHLP 328 >gi|58617116|ref|YP_196315.1| exodeoxyribonuclease III [Ehrlichia ruminantium str. Gardel] gi|58416728|emb|CAI27841.1| Exodeoxyribonuclease III [Ehrlichia ruminantium str. Gardel] Length = 278 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 40/316 (12%), Positives = 90/316 (28%), Gaps = 76/316 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N L + + + DI LQE+ N Sbjct: 2 LRIATWNVN----------------SIRKRIDHLCTWLTDYNIDIALLQEIKCTND---- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG----------- 132 + + ++ +A+ K V + + Sbjct: 42 ------QFPALEIKSLGYNYYVHGQKARNGVAIITKYPIVEEVVTNIFSLYGTSNVCCEL 95 Query: 133 --AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 +++ +R +E ++ NG KI V I++ + ++S + Sbjct: 96 GSEDFTYNCEESRY-LECVILYNGIKIRVGSIYVPNGQSVES------DAFQYKLGFFDQ 148 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLI 235 LK++++ + ++ GD+N + + +++I Sbjct: 149 LKEYMSFLLKKEEICILGGDYNVAPYPIDMYSYEIMNGKLCCHQFEREKFRSIINTGFFD 208 Query: 236 RFP---KEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 F +K N + ID ++ A + + Sbjct: 209 AFRLLNDDKKQFTWWNYKFGSWQENKGLRIDMLLLSPQAMDKVSSCVVHDE-------LR 261 Query: 288 RGKRLSDHCPISIDYD 303 SDH P+ D + Sbjct: 262 GLNVPSDHVPVVCDLN 277 >gi|154688190|ref|YP_001423351.1| ExoA [Bacillus amyloliquefaciens FZB42] gi|154354041|gb|ABS76120.1| ExoA [Bacillus amyloliquefaciens FZB42] Length = 252 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 83/304 (27%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L R + Y + ADI+ LQE + + Sbjct: 1 MKLISWNVNGL--------------RAVMKKIDINTYVQETAADILCLQETKVQDGQVSL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ + +++ +S + + + L G R Sbjct: 47 QPE-GYHAYWNYAVKKGYSGTAVFSK--------------EKPLHVLYGLGIDDHDQEGR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++V++ + + + + Q L + Sbjct: 92 -----VITLEFEHVFVVNCYTPNAKRGLERIDYRLQWEADFKDYLQKL--------DRKK 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + F + A Sbjct: 139 PVILCGDLNVAHREIDLKNPKANRKNAGFSEQEREAFSALLNAGFTDSFRYLYPDQEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DY ++ + + Q + SDHCP+ Sbjct: 199 SWWSYRTNAREKNIGWRLDYVIVSDRLKQRISQAAIC-----------ADIMGSDHCPVE 247 Query: 300 IDYD 303 + D Sbjct: 248 MTVD 251 >gi|58697046|ref|ZP_00372507.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Drosophila simulans] gi|225630665|ref|YP_002727456.1| exodeoxyribonuclease III [Wolbachia sp. wRi] gi|58536687|gb|EAL59975.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Drosophila simulans] gi|225592646|gb|ACN95665.1| exodeoxyribonuclease III [Wolbachia sp. wRi] Length = 259 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 85/305 (27%), Gaps = 72/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N L + + DIV LQE+ Sbjct: 2 LKIATWNVN----------------SIRKRVNQLCSFIVDSQIDIVLLQEIKCTEE---- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y+ + + + V K + + ++ Sbjct: 42 ------QFPYAEIEKLGYEYAIYGQVARNGVCVLSKYPILEKFKIDIVEGYQEARY---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E +++ N +K+ V +++ + DS + + L + ++ ++ Sbjct: 92 --IECIIKHNNQKVRVGSVYVPNGQSPDS------QAFEYKLKFFDNLYERMSTLLKNEE 143 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP----------------NDSLIRFPKEKDSRCNA 247 +IAGD+N + + D ++ N + Sbjct: 144 LTIIAGDYNVAPDEIDVFD--SNLLNGQVCFHIREREKLRAILNLGFKDAFRISHPNLQQ 201 Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY ++ A L DD + + SDH P+ Sbjct: 202 FTWWHYQGNSLRNNQGMRIDYMLLSPQAVDKLETCYI-------DDRLRKLENPSDHTPV 254 Query: 299 SIDYD 303 + Sbjct: 255 VCAIE 259 >gi|302556768|ref|ZP_07309110.1| secreted protein [Streptomyces griseoflavus Tu4000] gi|302474386|gb|EFL37479.1| secreted protein [Streptomyces griseoflavus Tu4000] Length = 295 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 40/292 (13%), Positives = 86/292 (29%), Gaps = 61/292 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--- 79 +R+ ++NI+ + ++ V D + L AD++ LQE+ + Sbjct: 48 PLRVATYNIHAGAGEDQVF-----------DLDRTAAAIRGLRADVIGLQEVDVHWGARS 96 Query: 80 -----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + +F++ ++ + +AV ++ + +++ + Sbjct: 97 DFADEARALADRLGMRVFFAPIYDLDPA-TADGERRQYGVAVLSRHPVLAAENHEITRLS 155 Query: 135 DSFSRAGNRRA---VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 S A E++V + G ++ V HL Y S+ Q + Sbjct: 156 TQSSDPVPAPAPGFAEVVVGVRGARVHVYTTHL-----------DYRADPSVRESQVADM 204 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 + + + P V+ GDFN + W + Sbjct: 205 LEVLATDRG---PKVLVGDFNAEAT-APELSPLWGRLRDAAPAAGPTYPAAEPVK----- 255 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID + D ++ SDH P+ D Sbjct: 256 ----RIDLITVSPGIGVR--------------DARTVATEASDHRPVVADLT 289 >gi|282881078|ref|ZP_06289765.1| endonuclease/exonuclease/phosphatase family protein [Prevotella timonensis CRIS 5C-B1] gi|281304882|gb|EFA96955.1| endonuclease/exonuclease/phosphatase family protein [Prevotella timonensis CRIS 5C-B1] Length = 290 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 85/287 (29%), Gaps = 45/287 (15%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--- 76 + +R++++N G + + + L D+V +QE+ S Sbjct: 42 SSGDIRIMTYNSFYCKANNGTPTFSD------ENTHRFASVIGALAPDVVAIQELDSSCV 95 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + + + E + I + V++ + PL G Sbjct: 96 HRNKRYLLEEISKYTGIDYELFFGSAANFDGGRIGCGLLVKRSMQVDDVKFTPLPGD--- 152 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R +E K V H+ D S L++ +A+ Sbjct: 153 ----EPRMLIEAKFP----KFTVFATHM------DLNPMNRKESAKLINNKAK------- 191 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 +S+VP + GD N + F + + + + + Sbjct: 192 ---KSVVPLFLIGDLNDSPTWKPEQSAFPELMQKFKIVSDASGSLPE--------QPGVT 240 Query: 257 IDYFVMDQNAYKFL-IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IDY ++ Q + + + + + + SDH P+ D Sbjct: 241 IDYVLLGQQHAEKIAVTGTHVVRRLSVKGEQLDLSTASDHYPVFADI 287 >gi|28871801|ref|NP_794420.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28855053|gb|AAO58115.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 363 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 43/342 (12%), Positives = 101/342 (29%), Gaps = 75/342 (21%) Query: 11 FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53 C+ +V Q +++++WNI L+ + + + + Sbjct: 35 LLTASCSTAVQAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTPEDLAYN 94 Query: 54 YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99 + + ++ DIV LQ + +A ++P +T ++ E + Sbjct: 95 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYQDQQKLLQERLADLYPCSTQAFYWKAEFVP 154 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKI 157 + S R + P+ A + + A+ + +G K+ Sbjct: 155 SPHIWGS-VGRKLTTLSRFHIDSAERLQLPMPDANIISRQFQPKNALLVSYLPLRDGGKL 213 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-- 215 V++ HL + D +Q + +++ + P++I GDFN Sbjct: 214 AVINTHLATAKPGDG----------TAQKQIASTETLLSKLEGGGTPWLIGGDFNLLPLG 263 Query: 216 ----------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-KNLRNKIPI------- 257 + + + + + + + + + N I Sbjct: 264 QYQRLPEQQRHGYAADSELHALWEKYPMIPNNTESSGTDRSQWLTHFPNDNRINGPDRTV 323 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 DY + + S + +SDH P+ Sbjct: 324 DYLFYSPSLKR----VSARVRRDDTLL-------ISDHLPVI 354 >gi|260947104|ref|XP_002617849.1| hypothetical protein CLUG_01308 [Clavispora lusitaniae ATCC 42720] gi|238847721|gb|EEQ37185.1| hypothetical protein CLUG_01308 [Clavispora lusitaniae ATCC 42720] Length = 807 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 46/325 (14%), Positives = 88/325 (27%), Gaps = 43/325 (13%) Query: 21 AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + L+S+N + + + L++ + D++ LQE+ + Sbjct: 455 SDTFTLMSYNTLCQHYATTKLYKYTPSWALEWEFRRNSLKEEILRYNTDLICLQEVETRT 514 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRKKNVRVLQQSYPLLG-- 132 P + + SK S ++ A R +++Q+ + Sbjct: 515 YHEFWLPIMESAGYNGFFFCKSRSKTMSESESKKVDGCATFFRASKFQLIQKQHLEYNTV 574 Query: 133 ---------AKDSFSRAGNR----RAVELLVEINGKKIWVLDIHLKSFC-FLDSLENTYS 178 KD F+R N+ L G+KI +++ HL F D Sbjct: 575 CMGSDRYKKTKDLFNRFMNKDNIALITYLQHIETGEKIVLVNTHLHWDPAFNDVKALQVG 634 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL--IR 236 L + + + +I GDFN + + + L Sbjct: 635 ILLEELQSMMKKFQHTNSVDDIKNSSLIICGDFNSTKSSAVYQLFSTGAVSKHGDLEGKD 694 Query: 237 FPKEKDSRCN------------------ANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277 + + D + N IDY + E Sbjct: 695 YGRFTDEGFHHNFKLKSAYDSIASDFPFTNFTPTFTEVIDYVWYSTNTLQVKGLLGKPDE 754 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302 Y+ SDH P+ + Sbjct: 755 EYYSHHVGFPNAHFPSDHIPLVTKF 779 >gi|164687865|ref|ZP_02211893.1| hypothetical protein CLOBAR_01509 [Clostridium bartlettii DSM 16795] gi|164603140|gb|EDQ96605.1| hypothetical protein CLOBAR_01509 [Clostridium bartlettii DSM 16795] Length = 240 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 45/301 (14%), Positives = 90/301 (29%), Gaps = 68/301 (22%) Query: 9 LVFFLVPCTASVAQ------KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 ++ + + ++++S+NI++ +++ ++ + K Sbjct: 1 MIILIASFLGTSQDKNTEKIDIKIISYNIHSGTDKNMAPTLFDT-----------INFLK 49 Query: 63 NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 +ADI+ LQE+ + V + + N N+ + +A K Sbjct: 50 KSNADIICLQEVNESSKVGFQVSSLKEELNMNLHFGAN----VVKNNTNYGLATYSKYKI 105 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 + Q+ L + R + V + KK+ +++IHL Sbjct: 106 ISQKHVYLSSTR------EQRGFLHTTVRVKDKKLHIINIHLGLG-------------DK 146 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 +Q L+++I FV+ GDFN +D + K Sbjct: 147 ERKKQINELQNYIKGL--KKDYFVVLGDFNEGNLS----------LDDEIIIDVAEKLNK 194 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 S IDY + N + + SDH PI Sbjct: 195 SNILTFSTEL--DRIDYMFVSNNIEVKSYEVLIKNM--------------SDHYPIVAKI 238 Query: 303 D 303 Sbjct: 239 S 239 >gi|145516224|ref|XP_001444006.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124411406|emb|CAK76609.1| unnamed protein product [Paramecium tetraurelia] Length = 347 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 32/287 (11%), Positives = 86/287 (29%), Gaps = 37/287 (12%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++++++++NI +++G + W + ++ + + ++ +I LQE+ ++ Sbjct: 89 TEQLKVMTFNIRYDCKEDGKNDWNHRKS-------VVYKLIRKINPEIFGLQEVLAHQQA 141 Query: 81 AKVFPKN-TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + + P + S+ Sbjct: 142 DLQSNLQGNYNFIGRGRQNNFWDDEGCPIYYDMLKYNIVQAEVFWFSDTPYVAGSKSYGN 201 Query: 140 AGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R + + +++ K V + H + + A+ +K I Q Sbjct: 202 GFPRICTYVKLLHKMSQKVFHVYNTHFDH------------ENKLSQIKSAEQIKRHIQQ 249 Query: 198 KKESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 ++ GD N W+ +++ + +A L+ Sbjct: 250 YCSPEDKIIVMGDLNSLPMSDAVKILTSPIWQGFTLQNTMGVL-DMPLATMHAWYGLKLG 308 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP-ISI 300 + IDY + + + G+ SDH P + + Sbjct: 309 LHIDYIFL----------GNLKYKSMMIVNDLIDGQYPSDHFPKVVV 345 >gi|302383762|ref|YP_003819585.1| exodeoxyribonuclease III Xth [Brevundimonas subvibrioides ATCC 15264] gi|302194390|gb|ADL01962.1| exodeoxyribonuclease III Xth [Brevundimonas subvibrioides ATCC 15264] Length = 264 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 32/303 (10%), Positives = 78/303 (25%), Gaps = 65/303 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + Q+ + D+V QE+ + + Sbjct: 1 MRIATWNVN----------------SVNARLPTVLQWLEAAVPDVVCFQEIKTVDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + +A+ K + + Sbjct: 41 ------KFPREAFESLGYNVEVHGQKSYNGVALLSKYPVSDVRRGLPGSDLLAEGEDDQA 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R +E L+E + I V ++L + + + + Y + L + Sbjct: 95 RYIEALIEAP-RPIRVGGLYLPNGNPIGTGKFDYK------LRWMGRLNAHARDLLANEE 147 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 F + GD+N + + ++ + Sbjct: 148 AFTLCGDYNVIPTPDDAKTPSAWVTDALFQPESRAAFRALKGLGLYEAGELGNQPP-GTY 206 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ A + + SDH P+ Sbjct: 207 TFWDYQAGAWQRDHGIRIDFHLLSPQAADRFVGV-------ETHRDARDMDKPSDHVPVV 259 Query: 300 IDY 302 I+ Sbjct: 260 IEL 262 >gi|79605875|ref|NP_973943.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] gi|332193243|gb|AEE31364.1| carbon catabolite repressor protein 4-like 4 [Arabidopsis thaliana] Length = 358 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 44/324 (13%), Positives = 87/324 (26%), Gaps = 46/324 (14%) Query: 24 VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 RLVS+NI + + + + + + KNL AD LQE+ Y++ Sbjct: 33 FRLVSYNILAQVYVKSALLPHSPPACLKWKARSHAILSVLKNLQADFFCLQEVDEYDSFY 92 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +R + + A R+ DS S + Sbjct: 93 RNNMDSLGYSGIYIQRTGQRKRDGCAIFYKPSCAELVTKERIEYNDLVDSIKADSVSCSE 152 Query: 142 NRR----------------------------AVELLVEINGKKIWVLDIHLKSFCFLDSL 173 + + IN ++ + + L Sbjct: 153 QKIETSNEGKDSRKDSRDLNDPLVRLKRDCVGIMAAFRINKPFQHIVIVANTHLYWDPEL 212 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------LGNNDD 223 + L + K I+ + E ++AGDFN + Sbjct: 213 ADVKLAQAKYLLSRLAQFKTLISDEFECTPSLLLAGDFNSIPGDMVYSYLVSGNAKPTET 272 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY--- 280 + P + + N +DY + + F+ S ++ Sbjct: 273 IEEEEAPVPLSSVYEVTRGEPKFTNCTPGFTNTLDYIFISPS--DFIKPVSILQLPEPDS 330 Query: 281 -NEDDIKSRGKRLSDHCPISIDYD 303 + SDH PI +++ Sbjct: 331 PDVVGFLPNHHHPSDHLPIGAEFE 354 >gi|302343712|ref|YP_003808241.1| exodeoxyribonuclease III [Desulfarculus baarsii DSM 2075] gi|301640325|gb|ADK85647.1| exodeoxyribonuclease III [Desulfarculus baarsii DSM 2075] Length = 259 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 36/306 (11%), Positives = 79/306 (25%), Gaps = 78/306 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAK 82 + S+N+N L + +L + + D V LQE + + + Sbjct: 4 TIASFNVNGL----------------RARLGILGDWLAHNQPDAVCLQETKVQDQDFPRQ 47 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + + + +A+ K G + + Sbjct: 48 AVEELGYHVAFH------------GQKSYNGVAILSKRP----ADEHGHGFGELWDDDQA 91 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + ++ +WV++++ Y L+ W+ + Sbjct: 92 R-LLWAKLD----GLWVINVYAPQGRDPSDPAFAYKLEFFRR------LRAWLEARFSPG 140 Query: 203 VPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247 V GDFN + +D + + F + ++ Sbjct: 141 EALVCCGDFNVAPQDIDLHDPVKLAGQVGCHPDERAAYANVLDWGLEDVFRRLHPAQ-KQ 199 Query: 248 NKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ + Q D R ++ SDH P Sbjct: 200 FTFWDYRLRGALSRDLGWRIDHILASAGLAPACGQCLV-------DMAPRRLEKPSDHTP 252 Query: 298 ISIDYD 303 I + Sbjct: 253 ILARFS 258 >gi|254854529|ref|ZP_05243877.1| exodeoxyribonuclease [Listeria monocytogenes FSL R2-503] gi|258607929|gb|EEW20537.1| exodeoxyribonuclease [Listeria monocytogenes FSL R2-503] Length = 251 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 84/304 (27%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L +Y + +DADI LQE Sbjct: 1 MKLISWNVNGLRAAVKKGF---------------LEYFEEVDADIFCLQETKLQEG-QIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + Q + D+ R Sbjct: 45 LDLPAYKDYWN----------YAVKKGYSGTAIFTKVEPLSVQYGFGVPEHDTEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++ +++ ++ + + +++ + Sbjct: 91 -----VITLEFEEFFMVTVYTPN-------SQAELKRLDYRMTFEDAILEYVK-NLDKTK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + F +A Sbjct: 138 PVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + L+ + SDHCP+ Sbjct: 198 SWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVL-----------GSDHCPVE 246 Query: 300 IDYD 303 ++ + Sbjct: 247 LELN 250 >gi|56478194|ref|YP_159783.1| putative endonuclease / exonuclease / phosphatase [Aromatoleum aromaticum EbN1] gi|56314237|emb|CAI08882.1| conserved hypothetical protein, putative endonuclease / exonuclease / phosphatase [Aromatoleum aromaticum EbN1] Length = 284 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 78/304 (25%), Gaps = 46/304 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-GSYNAVA 81 +R+VSWNI +G D ++ DA+++ LQE+ ++ + Sbjct: 1 MRIVSWNIQWGRGADG-----------RVDLERTVAAIHDIGDAEVICLQEVAQNFPGLE 49 Query: 82 KVFPKNTWCIFYSTERLINHSKRDS-------NNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 ++ I + + + + L Sbjct: 50 GGDCEDEVAILAAAFPGHEAMYGAGIDVPDGAGGRARFGNLMLSRLEVGPVFRHLLPCPA 109 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD-----SLENTYSPSCSLLSQQAQ 189 D A R VE +++ + VL HL+ + ++ + Sbjct: 110 DPGQAAMQRCCVEAVLQAPWGPVRVLTTHLEYYSARQRAAQVAMLRALQKEVAGQVAAGP 169 Query: 190 WLKDWITQKKESLVPF--VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK-------- 239 ++ P V GDFN + + Sbjct: 170 AGREASPAFAAGRRPVTAVACGDFNCEPGSGAYTLMSADIALHVPPWRDAWRVKHRSRAH 229 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + + DY + + + Q SDH P+ Sbjct: 230 DPTVGLHGAEWPGRTYCCDYAWVSDDLAARVAQVEV-----------YAATPASDHQPLV 278 Query: 300 IDYD 303 ++ + Sbjct: 279 LELN 282 >gi|268680126|ref|YP_003304557.1| endonuclease/exonuclease/phosphatase [Sulfurospirillum deleyianum DSM 6946] gi|268618157|gb|ACZ12522.1| Endonuclease/exonuclease/phosphatase [Sulfurospirillum deleyianum DSM 6946] Length = 310 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 40/317 (12%), Positives = 86/317 (27%), Gaps = 64/317 (20%) Query: 23 KVRLVSWNINTLSE-----QEGVSLWKNSVKRT-----TSDYTLLRQYAKNLDADIVFLQ 72 + ++ ++NI L + E N+ + Q +++AD++ L Sbjct: 16 EFKVATYNIENLFDATKNGNEYKEYSPNTKHGWNEAMVERKIAHIAQVIGDINADVIALA 75 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ + + ++ + R L +P+ Sbjct: 76 EVENKAILERLNNALGAKKYPYLFYPKKKE--------------RVSIESALLSRFPIAQ 121 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 F + R + ++I + V H + + A LK Sbjct: 122 TDSLFMKDQPRGIHRITLKIEQNLLDVYINHWPA----------HKEKEDERLVYATTLK 171 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI-------DPNDSLIRFPKEKDSRC 245 + + KE F++ GDFN D + + + Sbjct: 172 NSL--LKEKDKAFILLGDFNSPYQVQKE-DWGLGFVTVLGVGDKSAPLYNTWYDLPQNER 228 Query: 246 NANKNLRNKIPIDYFVMDQNAYK----FLIQESFSEILY----------------NEDDI 285 ++ + K +D+ V+ Y S + Sbjct: 229 YSHSYGKQKTALDHIVIAPTLYDAKGIEYKANSLKRFEAPYMLDVKGNPKRWQISDRGKG 288 Query: 286 KSRGKRLSDHCPISIDY 302 K G+ SDH P++ + Sbjct: 289 KHLGEGYSDHFPVTAIF 305 >gi|86739888|ref|YP_480288.1| exodeoxyribonuclease III [Frankia sp. CcI3] gi|86566750|gb|ABD10559.1| Exodeoxyribonuclease III [Frankia sp. CcI3] Length = 304 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 75/307 (24%), Gaps = 69/307 (22%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + VR+ +WNIN + L ++ + D+V LQE Sbjct: 5 STDVRIATWNIN----------------SAKARQARLIEWLDRAEPDVVCLQE------- 41 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K+ +F + + +A+ + L L F Sbjct: 42 TKLADDAFLELFDEDLFRRGYRVAHHGDGRWNGVAILSR--DTLDDVARGLPGDPGFPGP 99 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R I + +++ + +D Y + L++ + + Sbjct: 100 EPRAIAATC-----GGIRIWSLYVPNGRTIDDPHYAYKLA------WLAALREVVAEATT 148 Query: 201 SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + GDFN + + + + Sbjct: 149 QGA-VMTLGDFNIAPTDVDVWDITQFEGATHVTPAERAALAELVDAGLIDVL-RARWPDD 206 Query: 246 NANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + ID + + + D +G SDH Sbjct: 207 VVYTYWDYRQLCFPKNLGMRIDLALATADVAGRVRAVWV-------DRAARKGVGTSDHA 259 Query: 297 PISIDYD 303 P+ +D D Sbjct: 260 PVIVDLD 266 >gi|307545625|ref|YP_003898104.1| exonuclease III [Halomonas elongata DSM 2581] gi|307217649|emb|CBV42919.1| exonuclease III [Halomonas elongata DSM 2581] Length = 277 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 39/314 (12%), Positives = 75/314 (23%), Gaps = 74/314 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +RLVS+NIN + L + ++ LQE + A Sbjct: 1 MRLVSFNING----------------IRARLHQLEALVERHRPAVIGLQETKVQDSEFPA 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + ++Y H +A+ + + G D A Sbjct: 45 EAVEALGYRVYYH------------GQKGHYGVALMCCREQCPEPELVQRGFPDDEDDAQ 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R L +G+ + V + F + + L + ++ Sbjct: 93 RRLIGVRLRGADGEPLTVWN-----GYFPQGENIEHPVKFPHKRRFYAQLSSLLKEQHRP 147 Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240 I GDFN ++ I + Sbjct: 148 DERLAIMGDFNISPADIDIGIGESNRKRWLREGKTSFQPEEREWLDAIKAWGLSDSYRDR 207 Query: 241 KDSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + IDY + + D Sbjct: 208 YPEVDDRFSWFDYRSKGFDRDPKRGLRIDYILTTAPLATHIADAGI-------DYDLRGM 260 Query: 290 KRLSDHCPISIDYD 303 ++ SDH P+ ++D Sbjct: 261 EKPSDHAPVWTEFD 274 >gi|302865833|ref|YP_003834470.1| endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca ATCC 27029] gi|302568692|gb|ADL44894.1| Endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca ATCC 27029] Length = 675 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 41/289 (14%), Positives = 85/289 (29%), Gaps = 57/289 (19%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 T A VR+ ++NI +G D + + + AD+V L E+ Sbjct: 442 ATTTPAA--VRVAAYNIRMGFGLDG-----------RLDVDAVARELR--GADVVLLSEV 486 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + RL D AV + Q+ L Sbjct: 487 DRGWWL----NGGHDTLALVAGRLGMPYVFAPAADPVWGDAVLSRFPMRSGQTRRLTAHG 542 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A+ + +++ G+++ V+ HL+ D +QA + + Sbjct: 543 APTGAQ----ALGVTLDLGGRELAVVATHLQPPPGRDP------------VEQAGEVAAF 586 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + P V+ GD N + + D + + + + + Sbjct: 587 -AGRYANGRPLVLGGDLNTEPD-----DPAFAEFTRSGLVDAL--AAARPLRTSPADDPR 638 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID+ + ++ +E SDH P+++ Sbjct: 639 TQIDHVFVSPGLTATEVRAPRTE--------------ASDHLPVTLTVT 673 >gi|255011538|ref|ZP_05283664.1| hypothetical protein Bfra3_20505 [Bacteroides fragilis 3_1_12] gi|313149364|ref|ZP_07811557.1| metallophosphoesterase [Bacteroides fragilis 3_1_12] gi|313138131|gb|EFR55491.1| metallophosphoesterase [Bacteroides fragilis 3_1_12] Length = 608 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 83/300 (27%), Gaps = 57/300 (19%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K VL L L +A +RL+++N+ + +Y + Sbjct: 1 MKKLVLLLFSALFVLSAQAGDVLRLMTYNVRNARGMDNSC-----------NYQRVANVI 49 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 N D+V +QE+ S A + + T+ + + I + K Sbjct: 50 NNARPDVVAVQELDSMTARSNGTDVLR-ELAERTQLHPYFAPAIDYDGGKYGIGLLAKEA 108 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + Q++ L G R R + C SL Sbjct: 109 PLRLQTFALPG------REEARTLIVAEF-----------PEYIFGCTHLSLTEEDR--- 148 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + L+ + + PF +AGDFN + + Sbjct: 149 ------MKSLEILKSVAVSAEKPFFLAGDFNSDAGSGFIKELKNTF--------QVLSNP 194 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 K +DY + + + S I SDH P+ ++ Sbjct: 195 KQPTYPAS--EPKETLDYLIALKQEKPTFVVSSARVI---------DEPLASDHRPLLVE 243 >gi|221212763|ref|ZP_03585739.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD1] gi|221166976|gb|EED99446.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD1] Length = 285 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 36/306 (11%), Positives = 85/306 (27%), Gaps = 50/306 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 +R++ WNI + +GV + + + + D D++ +QE+ Sbjct: 1 MRVIDWNIQWGRDADGVVDLRRT----------IAAARQLADFDVLCVQEITRGFDALPG 50 Query: 75 -GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + A++ + A+ + L Sbjct: 51 HPGVDQFAELAALLPGYTVVEAIGADLPPAQPGAPRRQFGNAIATRLPVGRVLRQLLPWP 110 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 D+ + + R A+++ + + V+ HL+ + + + ++A D Sbjct: 111 ADADAPSMPRVALDVELLTASGPLRVVTTHLEFYS--ERQRLAQVDAIRARHREACAHAD 168 Query: 194 WITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + PF ++ GDFN + + + + R Sbjct: 169 RPAPAENDTGPFVATAQSRDAILCGDFNSAFDSAAYRRMLEPIDGAPAFVDAWIAQHPGR 228 Query: 245 C--------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + + D+ + L + R SDH Sbjct: 229 TPPPTAGVYDTAQWSDGPLACDFAFVTDTLLPRLARCEI-----------DGAVRASDHQ 277 Query: 297 PISIDY 302 PI ++ Sbjct: 278 PIVLEL 283 >gi|251791412|ref|YP_003006133.1| Endonuclease/exonuclease/phosphatase [Dickeya zeae Ech1591] gi|247540033|gb|ACT08654.1| Endonuclease/exonuclease/phosphatase [Dickeya zeae Ech1591] Length = 380 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 35/291 (12%), Positives = 83/291 (28%), Gaps = 31/291 (10%) Query: 33 TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF 92 L E + +R + K L ADI+ E+ + + + Sbjct: 99 WLGELVFRAEPFGDQQRQNTGL-----VIKALKADILCAVEVENMAVLRDFNQQILADHA 153 Query: 93 YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152 ++ +I+ I A R + ++ + A SF+ +R +E+ +++ Sbjct: 154 FAQYVMIDSPN--DPRGIDVACLTRHRITQL---RTHIFDASGSFTPLFSRDCLEVTIDV 208 Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 G V + + + QA+ + + + V+ GD N Sbjct: 209 -GLPQPVHVLCNHFKSQNGRNDEERERAAKRRLAQAERVAEIVRGYNLQQEYVVVMGDLN 267 Query: 213 RKINYLGNN-DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYK 268 ++ + D + + E + + +DY + ++ Sbjct: 268 EDAANPWHSLTPLFSIPDLHPVIDPNLPETARYTYYFSGGKPQERLNQLDYIFISTPLHR 327 Query: 269 FLIQESFSEI----------------LYNEDDIKSRGKRLSDHCPISIDYD 303 + + + S SDH + ++ D Sbjct: 328 AKVTCGIERRGIYNIDKIAAKEGAEPVTPFPTVTSWDTGASDHAAVWVELD 378 >gi|34540111|ref|NP_904590.1| exodeoxyribonuclease III [Porphyromonas gingivalis W83] gi|34396422|gb|AAQ65489.1| exodeoxyribonuclease III [Porphyromonas gingivalis W83] Length = 254 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 91/304 (29%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++S+N+N L + L + + + D++ LQE M + Sbjct: 1 MKIISYNVNGLRA---------------AMKKDLIGWLREENPDVLCLQETKMQNDQFEK 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F + + + + + + +A+ K+ Q + G A Sbjct: 46 EEFEALGYRSYLFSAQKKGY----------SGVAIITKH----QPDHIEYGMGMEEYDAE 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + + ++ ++ S D + + + + ++ + ++S Sbjct: 92 GRF-----IRADFGDLSIVSVYHPSGTSGDERQ-------AFKMVWLEHFQSYVNELRKS 139 Query: 202 LVPFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD+N + +D W + D + + Sbjct: 140 RPNLILCGDYNICHEPIDIHDPIRNAKNSGFLPEEREWMSRFLADGYVDTFRHTHPELVL 199 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY ++ N + + SDHCPI Sbjct: 200 YSWWSYRFQARSRNKGWRIDYCMVTNNLADRIKGADILNEAVH-----------SDHCPI 248 Query: 299 SIDY 302 ++ Sbjct: 249 VLEI 252 >gi|299821801|ref|ZP_07053689.1| exodeoxyribonuclease III [Listeria grayi DSM 20601] gi|299817466|gb|EFI84702.1| exodeoxyribonuclease III [Listeria grayi DSM 20601] Length = 254 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 80/303 (26%), Gaps = 77/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R +SWN+N L Y K DADI +QE ++ Sbjct: 1 MRFISWNVNGLRAAVKKGF---------------SDYFKEADADIFCVQETKLQAGQIEL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ AV K + Q G + R Sbjct: 46 EGLEGYHDYWN----------YAVKKGYSGTAVFTKEEPLSVQ----YGLPEDVHNQEGR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + + ++ + + + + L + Sbjct: 92 -----VITLEFPAFYFVTVYTPNSQAELKRLDYRTEWEQAFADHIIAL--------DKQK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V GD N + + + N + F + +A Sbjct: 139 PVVFCGDLNVAHQEIDLKNPKTNRKNPGFSDQERAMFGQLLDNGFVDTFRYLYPEQEDAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + + + SDHCP+ Sbjct: 199 SWWSYRMNARSRNVGWRIDYFVVSSRLSDSIQEARIHAEVL-----------GSDHCPVE 247 Query: 300 IDY 302 ++ Sbjct: 248 LEI 250 >gi|148259957|ref|YP_001234084.1| exodeoxyribonuclease III Xth [Acidiphilium cryptum JF-5] gi|326403089|ref|YP_004283170.1| exodeoxyribonuclease III [Acidiphilium multivorum AIU301] gi|146401638|gb|ABQ30165.1| exodeoxyribonuclease III Xth [Acidiphilium cryptum JF-5] gi|325049950|dbj|BAJ80288.1| exodeoxyribonuclease III [Acidiphilium multivorum AIU301] Length = 256 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 33/302 (10%), Positives = 75/302 (24%), Gaps = 71/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N RT + + + K D++ LQE+ Sbjct: 1 MRIATWNVN--------------SARTRAGL--IADFLKREQPDLLLLQEIKCET----- 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +AV + + +D+ Sbjct: 40 -----QQFPAAAFEAEGYRAEVVGQKAYNGVAVLSRGAVTVTHRRLPGEEEDA------- 87 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + +E G + V +++L + + L+ E Sbjct: 88 AARFIEIEAGG--LLVGNLYLPNGNSGGGDGFAAKLD------WMEKLRRHAASLLEHDR 139 Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 F++AGD+N + ++ + Sbjct: 140 DFILAGDYNVCPTDADLAKGALPADDALVRPESRAAFRALIWLGLTDALRALHPDETLYT 199 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ID+ ++ + L + + SDH P+ + Sbjct: 200 FWDYQAGAWQRDRGLRIDHALLSPRVAERL-------DTVRVAREERDKPQPSDHVPVIV 252 Query: 301 DY 302 Sbjct: 253 SL 254 >gi|260598074|ref|YP_003210645.1| hypothetical protein CTU_22820 [Cronobacter turicensis z3032] gi|260217251|emb|CBA31170.1| hypothetical protein CTU_22820 [Cronobacter turicensis z3032] Length = 370 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 85/258 (32%), Gaps = 19/258 (7%) Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + +L+AD++ + E S A+A + + R + + + I + Sbjct: 119 AKVMSDLNADVLAVVEAESRPALAAFNQEIIAALGGEPFRHVMVIDGNDSRGIDVGLLTG 178 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + +S+ + NG +WV+ HLKS + Sbjct: 179 AEYPIGPMRSHVDDRDARGQLIFSRDCPEYSVPLANGDTLWVMVNHLKSKGYGG-----K 233 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFV-IAGDFNRKINYLGNNDDFWKT-IDPNDSLI 235 + S + QAQ + D ++++ F+ IAGDFN +T + + Sbjct: 234 AESDARRKAQAQRVADIYKARRDAGEQFIAIAGDFNDTPESDTLAPLLKETDLRDAFTHP 293 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF----------SEILYNEDDI 285 F N NK +DY ++ ++ + ++ Sbjct: 294 AFDNGGYPGTWGNSAKNNK--LDYILLSPALWERVTAGGVIRKGMWPGERPVKWDVYPEL 351 Query: 286 KSRGKRLSDHCPISIDYD 303 K + SDH + +D + Sbjct: 352 KKPQQAGSDHAALWVDLN 369 >gi|254295374|ref|YP_003061397.1| endonuclease/exonuclease/phosphatase [Hirschia baltica ATCC 49814] gi|254043905|gb|ACT60700.1| Endonuclease/exonuclease/phosphatase [Hirschia baltica ATCC 49814] Length = 315 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 41/283 (14%), Positives = 79/283 (27%), Gaps = 35/283 (12%) Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 + D TL Q ADI LQE+ + + + + + Sbjct: 38 SEDDRTLTAQALSASQADICCLQEVENLVTLTAFHNRYLRRWLKKGYFYRALVEGNDQRG 97 Query: 110 IHTAIAVRKKNVRVLQQS--------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 I + R K +R L + R R +E+ VE GK + + Sbjct: 98 IDVGVLSRVKIIRKLSHADKTYADLNIKPPLGCHENDRIFRRDCLEIEVEKEGKSLTLFV 157 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNR------ 213 H KS + + +A+ ++ I Q+ ++ GDFN Sbjct: 158 CHFKSMHGGRTETKPVREA------EAKAVRILIEQRFADPEAENWIALGDFNDYFELDG 211 Query: 214 -KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 + G + + + + + +D+ M + Sbjct: 212 ATLFDHGLGPLIRDGFAIDAGVTLEKSPLNRWTHYYSHGDVYGALDHIFMSPSLAARNQD 271 Query: 273 ESFSEILYNED------------DIKSRGKRLSDHCPISIDYD 303 + + + + SDHCP+S+ Sbjct: 272 ARLRIVRAGQPLRANRYKGHRFGGVGWMRPKSSDHCPLSVTLS 314 >gi|271967547|ref|YP_003341743.1| metal-dependent hydrolase-like protein [Streptosporangium roseum DSM 43021] gi|270510722|gb|ACZ89000.1| Metal-dependent hydrolase-like protein [Streptosporangium roseum DSM 43021] Length = 617 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 36/291 (12%), Positives = 71/291 (24%), Gaps = 54/291 (18%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 P +R+ ++NI + + L +V L Sbjct: 376 ATPRWEPPGDGLRVAAYNIRM-----------GYGESGRLSLERQADTLRALRPHVVVLS 424 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E + + ERL D A+ +++ L+ Sbjct: 425 EADRGW----LLNGGHDDVRLIAERLGMRYIWAPAADEVWGDALLTDLPVTSVRNHVLVQ 480 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + ++ A+E+ + G+ + V+ HL+ Q + L Sbjct: 481 GGPTGAQ-----ALEVGLRWQGRDVTVIGTHLQPPPGWRE------------LDQVEQLG 523 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + P V+AGD N + + P + Sbjct: 524 RIVRDAAAGGRPVVVAGDLNLEPADPAWEVLMGSGLTD-------PIAPVRPFSTIPTPG 576 Query: 253 NK-IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ ++ SDH PI++ Sbjct: 577 GPAQQIDHVLVTPGFTGRDQANVDVPH--------------SDHRPIAVTL 613 >gi|56752781|gb|AAW24602.1| SJCHGC02357 protein [Schistosoma japonicum] Length = 339 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 82/307 (26%), Gaps = 26/307 (8%) Query: 23 KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 K+R++ WNI + + L+ + D DIV LQE + Sbjct: 28 KIRIMQWNILAQGFIPLDEFVHCPCKMLSFERRCRLIAEEILRYDPDIVCLQEADIIKDI 87 Query: 81 AKVF----PKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 ++ K+ + ++ + ++++ A+ R ++++ L D Sbjct: 88 VEILTTRRGKDDYSFYFLPKYNSPCLMIKNNHGPDGLAVIYRNDKYKLIKTEKIPLNEDD 147 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 S + + N + I L E L++ + +++ Sbjct: 148 SRHALFCHFVPKAVGSSNKSFSDIYLICLHLKAKETYREIRKKQGQKLINYLSSFIERIC 207 Query: 196 TQKKESL----VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR-----FPKEKDSRCN 246 + P I GDFN N + + N + Sbjct: 208 STGLSVNSNVFPPIFICGDFNADPTEPVINLLQNFSFNSNTLYKLTSAYYVAEGCKEPEF 267 Query: 247 ANKNLRNKIPI----------DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 +R I DY L S SDH Sbjct: 268 TTWKIRKSKRITNLTEICHTVDYIWYCNQLCTLLGVWSIPSKREIGPSGLPSAIFPSDHM 327 Query: 297 PISIDYD 303 + D+ Sbjct: 328 NLIADFS 334 >gi|4678346|emb|CAB41156.1| putative protein [Arabidopsis thaliana] Length = 686 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 97/337 (28%), Gaps = 87/337 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 + ++WN N+ + R +D++ ++ + D D++ +QE+ A K Sbjct: 366 KFMTWNANSF------------LLRVKNDWSQFSKFVSDFDPDVIAIQEVRMPAAGGKGK 413 Query: 85 PKNTWCI----------------FYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQS 127 PKN + S+ N+ S + + A+ K ++ Sbjct: 414 PKNHEELSDDTKVLREEKQILTRALSSPPFGNYGVWWSLADSKYAGTALLVKKCFKPRKV 473 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 Y L S R + + +L+ + + + + + Sbjct: 474 YFNLDKLASKHEPDGRVILA-----EFETFRLLNTYSPN-----NGWKDEENAFQRRRKW 523 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINY------------------------------ 217 + + +++ K S P + GD N Sbjct: 524 DKRIVEFLN--KTSDKPLIWCGDLNVSHEEIDVSHPEFFATAKLNGYVPPNKEDCGQPGF 581 Query: 218 -LGNNDDFWKTIDPNDSLIRFPKEK----------DSRCNANKNLRNKIPIDYFVMDQNA 266 F TI + + S K ++ IDYF++ + Sbjct: 582 TPSERGRFGATIKEGRLVDAYRYLHKEQEMESGFSWSGNPIGKYRGKRMRIDYFLVSEQL 641 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + G SDHCP++++ Sbjct: 642 KDRIVSCKMHGRGIELE-----GFHGSDHCPVTLELS 673 >gi|56552297|ref|YP_163136.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ZM4] gi|56543871|gb|AAV90025.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ZM4] Length = 261 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 88/304 (28%), Gaps = 73/304 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 ++ S+N+N ++ + L ++ + DI+ LQE+ S +A Sbjct: 3 KIASFNVNGIN----------------ARLPRLIEWLEKFQPDILCLQELKSDDA----- 41 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + + +A+ K Q D +R Sbjct: 42 -----RFPQEEIEKTGYYCLYHGQKAYNGVAILSK----EQPKLIRTSLPDDPDPTQSRY 92 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 +E + V ++L + L+S + Y + + + P Sbjct: 93 -----IEAEIDNLTVASLYLPNGNPLNSPKYDYKLA------WFKAFLAHARSLWQQEKP 141 Query: 205 FVIAGDFNRKINYL-----------------GNNDDFWKTIDPNDSLI----RFPKEKDS 243 ++AGD+N ++ + +W+ + R P E Sbjct: 142 VILAGDYNVVPSFDIKDIRNAAALADNALLAPESLFYWRQLLAMGWTDSLRVRHPSEPLY 201 Query: 244 RCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID+ ++ + L D ++ SDH P+ Sbjct: 202 SFWDYQAQSWPRDDGMRIDHILLTPDLADGLTDSGV-------DRQMRGQEKASDHAPVW 254 Query: 300 IDYD 303 I+ D Sbjct: 255 IEID 258 >gi|87308394|ref|ZP_01090535.1| extracellular nuclease, putative [Blastopirellula marina DSM 3645] gi|87288951|gb|EAQ80844.1| extracellular nuclease, putative [Blastopirellula marina DSM 3645] Length = 430 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 53/320 (16%), Positives = 95/320 (29%), Gaps = 46/320 (14%) Query: 2 IRKYVLALVFFLV---PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 +R L + L+ CT + A + + SWNI L + E L Sbjct: 1 MRTISLFIALSLLWITACTPASADIIHVGSWNIEWLGKPEMRKSPPQKPAD-------LA 53 Query: 59 QYAKNLDADIVFLQEMGS---------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 D++ LQE+ + +V + + + D Sbjct: 54 AEIDASGVDVLALQEICDDLPEHDRLGNKTLDEVCRLLNQRAGNQWKYELFPKRDIYAED 113 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEI--NGKKIWVLDIHLK 165 T +A + V+ + + + R+ V+ +H+K Sbjct: 114 QLTGVAWNEARVQRVGGAMRITPVDLLGDNYITWDRQPYAAKFSAGEGKTDFVVIPVHMK 173 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNR-KINYLGNND 222 S S E + A L + K+ +I GD N + G Sbjct: 174 SNYGDSSGEMRKHRAAE-----ASALIAELPAVKKMFGDEDIIILGDTNALSADEEGIQK 228 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 +S R KD+ D ++ QN +F + E++++ Sbjct: 229 FVKAGFRDLNSADRSTHTKDAPF------------DRALVPQNQPEF---ANAREVIHSG 273 Query: 283 DDIKSRGKRLSDHCPISIDY 302 D + +LSDH IS Sbjct: 274 RDSRDYRNKLSDHYLISFQI 293 >gi|319760561|ref|YP_004124499.1| exodeoxyribonuclease III [Candidatus Blochmannia vafer str. BVAF] gi|318039275|gb|ADV33825.1| exodeoxyribonuclease III [Candidatus Blochmannia vafer str. BVAF] Length = 274 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 85/311 (27%), Gaps = 76/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R VS+NIN L + L Q L D++ LQE +N + Sbjct: 1 MRFVSFNINGL----------------RARTHQLDQLINKLQPDVLGLQETKVHNDL--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + +A+ KK ++ + +PL Sbjct: 42 -------FPIKKIKKYGYHVYYDGQKQYHGVALFLKKLPLIVTRGFPL------NPCPYQ 88 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +R + + + + V++ + S + Y Q Q LK++I + Sbjct: 89 KRIITAQITTSIGSLTVINGYFPQGENNQSEKFIYKK------QFYQNLKNYIQNNYSNE 142 Query: 203 VPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 +I GD N L + + + + + Sbjct: 143 SLLLIMGDMNISPTDLDVGIGKKNTDRWIKMGKCAFLPEERQWITDLMNWGLIDIYRSKY 202 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + N + ID ++ Q + Sbjct: 203 PYQNNRYSWFSYQSNGFKNNRGLRIDLVLVTQPLAHLCTCSGI-------NYDIRNMTHP 255 Query: 293 SDHCPISIDYD 303 SDH PI +D D Sbjct: 256 SDHAPIWVDLD 266 >gi|155212609|gb|ABT17368.1| hypothetical protein [uncultured haloarchaeon FLAS10H9] Length = 620 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 37/284 (13%), Positives = 77/284 (27%), Gaps = 53/284 (18%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + A+ + +S+NI+ + +G + +R + A +V LQE Sbjct: 384 TAAAEPLTALSFNIHLYLDSDG-----------EHNLGAVRDLIRESGAGVVGLQETAGG 432 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + W +A+ ++ L Sbjct: 433 RLTSGGLDGVRWLAHELGYHAA---VGPPARLASYGVALLSAWPIREERVVVLPE----- 484 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 + R A+ VE + V+ HL + + QA+ + D + Sbjct: 485 RDSATRIALAATVESPLGPLPVVVTHL-------------ETAGDVRVAQAERVVDLVRA 531 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 + V+ GD N + + F +D + + I Sbjct: 532 TGDPDRALVL-GDLNATPDERP-YEVFSTVLDD------PWAGSAPGADTYSAADPRRRI 583 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 DY ++ + + +SDH +S+ Sbjct: 584 DYALVGRGWEARRGEVI-------------GSPTVSDHLGVSVT 614 >gi|255993955|ref|ZP_05427090.1| exodeoxyribonuclease III [Eubacterium saphenum ATCC 49989] gi|255993623|gb|EEU03712.1| exodeoxyribonuclease III [Eubacterium saphenum ATCC 49989] Length = 252 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 77/303 (25%), Gaps = 78/303 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 + +SWN+N + + D +QE ++ Sbjct: 3 KFISWNVNGIRACIKKGF---------------LDVLEGESPDYFAVQETKMQEGQEEIL 47 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + S +R ++ V K V + D R Sbjct: 48 TNGYHQYWDSAKR-----------KGYSGTLVLSKEEAVSTSKGIGIEEHDEEGR----- 91 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 +V + K +++++++ + + + L P Sbjct: 92 ----VVTADFKDFYLVNVYVPNSKPELARLDYRQHWEDDFRDYVVKLNK--------EKP 139 Query: 205 FVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 +I GD N R + + + + F + + A Sbjct: 140 VIICGDLNVAHTEIDLKNPKTNRRNPGFTDEEREKFTELLEAGFTDTFRYKYPDKEGAYT 199 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF++ + + +Y SDHCP+ + Sbjct: 200 WWSYRFNARKNNAGWRIDYFLVSNDVKDKIEDAKILSDVY-----------GSDHCPVVL 248 Query: 301 DYD 303 + D Sbjct: 249 ELD 251 >gi|225427661|ref|XP_002270851.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 414 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 77/305 (25%), Gaps = 42/305 (13%) Query: 40 VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV-FPKNTWCIFYSTERL 98 + + + + +NL AD + LQE+ Y++ K N + Y Sbjct: 105 FPHSPSPCLKWKARSQAILTVLRNLGADFLCLQEVDEYDSFYKGNMDSNGYSSIYVQRSG 164 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRV---------------LQQSYPLLGAKDSFSRAGNR 143 H ++A V ++ + P D+ + R Sbjct: 165 QKHDGCGIFYKHNSAELVLEEKIEYNDLVDLNDDGSYSNDRHCDTPASANSDAEPKKEER 224 Query: 144 R--------------AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + + ++ + + + L + Sbjct: 225 GDPNDPRVRLKRDCVGIMAAFRLKDPSHHLVIVANTHLYWDPEWADVKLAQAKYLLSRLA 284 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW-----KTIDPNDSLI-----RFPK 239 K ++ K E ++AGDFN ++ D L + Sbjct: 285 QFKTVVSDKFECTPSVLVAGDFNSTPGDKVYQYLVSGNSSVPQLECLDGLPIPLCSVYDF 344 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ--ESFSEILYNEDDIKSRGKRLSDHCP 297 + N +DY + + + E + SDH P Sbjct: 345 TRGEPPFTNCTPDFTNTLDYIFFSPSGHIKPVSFLELPEPDSSDVAGGLPNHHHPSDHLP 404 Query: 298 ISIDY 302 I ++ Sbjct: 405 IGAEF 409 >gi|302760229|ref|XP_002963537.1| hypothetical protein SELMODRAFT_270348 [Selaginella moellendorffii] gi|302799569|ref|XP_002981543.1| hypothetical protein SELMODRAFT_178984 [Selaginella moellendorffii] gi|300150709|gb|EFJ17358.1| hypothetical protein SELMODRAFT_178984 [Selaginella moellendorffii] gi|300168805|gb|EFJ35408.1| hypothetical protein SELMODRAFT_270348 [Selaginella moellendorffii] Length = 570 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 42/329 (12%), Positives = 91/329 (27%), Gaps = 46/329 (13%) Query: 20 VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 ++S+N+ + + + S L + ADI+ LQE+ S Sbjct: 233 APGSFTVLSYNVLADLYATSDMYSYCPQWALSWAYRRQNLLREIVGYRADILCLQEIQSD 292 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL------ 131 + P+ + + + + A +N R LQ + Sbjct: 293 HFDEFFAPELEKHGYSAVYKKKTAEVYAAGVYTIDGCATFYRNDRFLQVKKYEVEFNKAA 352 Query: 132 -GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF--------CFLDSLENTYSPSCS 182 +++ + R+A + + + V+ L C ++ + Sbjct: 353 QSFSEAYMPSAQRKAALTRLLKDNVALIVVLEVLDYPDPSKKQLICVANTHIHANPELKD 412 Query: 183 LLSQQAQWLKDWITQKKESLV-PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP--- 238 + Q Q L + + S P ++AGDFN ++ ++P + Sbjct: 413 VKLWQVQTLLKGLEKIAASAEIPMLVAGDFNSVPGSAPHSLLATGRVEPTHPELAIDPLG 472 Query: 239 ------------------------KEKDSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQE 273 + N +DY + + E Sbjct: 473 ILRPASKLCHQLPLVSAYSALSRRDGSNEPLFTNCTRDFLGTLDYIFYTADSIVVDSLLE 532 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302 E +D + SDH + ++ Sbjct: 533 LLDEESLRKDTALPSPEWSSDHIALLAEF 561 >gi|256090614|ref|XP_002581279.1| nocturnin [Schistosoma mansoni] gi|238667142|emb|CAZ37518.1| nocturnin, putative [Schistosoma mansoni] Length = 338 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 85/311 (27%), Gaps = 34/311 (10%) Query: 23 KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 K+R++ WN+ + + L+ + D D+V LQE + Sbjct: 27 KIRIMQWNMLAQGFIPLDEFIYCPCKMLSFERRCKLISEEILRYDPDVVCLQEADIIKDI 86 Query: 81 AKVFPKNTWCIFYSTERLINHSKRD-----SNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 K + + YS L S ++ A+ R N +++ L Sbjct: 87 VKCLNERSGRDNYSFCFLPKMSSPCLMVKNNHGPDGLAVIYRNDNYELIKSEKIPLNEDS 146 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 S +++ ++ + I L + E L ++L +I Sbjct: 147 SRYALFCHFIPKVVGHLSKSCSDIYLICLHLKAKVHCSEIRRKQGEEL----VKYLNSFI 202 Query: 196 TQKKESLVP--------FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR-FPKEKDSRCN 246 + + P I GDFN + N +++ N C Sbjct: 203 KRISSTSAPLNSTVFPPIFICGDFNAEPTEPVINILQNFSLNSNTLYKLTSAYYTAGGCK 262 Query: 247 ANKNLRNKIP--------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + KI IDY L S + Sbjct: 263 EPEFTTWKIRKSKRIVELTEDCHTIDYIWYCDRLCTLLGVWSIPSKNEIGPNGLPSAIFP 322 Query: 293 SDHCPISIDYD 303 SDH + D+ Sbjct: 323 SDHMNLIADFS 333 >gi|149175039|ref|ZP_01853662.1| hypothetical protein PM8797T_25206 [Planctomyces maris DSM 8797] gi|148846017|gb|EDL60357.1| hypothetical protein PM8797T_25206 [Planctomyces maris DSM 8797] Length = 321 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 87/312 (27%), Gaps = 59/312 (18%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + ++ + +R+++ NI +E LLR+ L D++ QE Sbjct: 31 TSSETLDRPLRVLTANIWNYAEP------------YELRMKLLREQITALQPDLIGFQEA 78 Query: 75 ----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 + V ++ + I + D+ +AV + + + L Sbjct: 79 GWKPEEEHQVKQLLQGLNYHIEHE------SDGSDNKERRLLDVAVASRWPLKRKAFHSL 132 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G+ + AVE+ ++ + + D + Sbjct: 133 PGSGKA-------LAVEITAPQPIGRLLFVSTFGTARWQFDRELQRERDAV--------A 177 Query: 191 LKDWITQKK-ESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNAN 248 L +I + + P +IAGDF+ + G +++D + + + A Sbjct: 178 LDRFIREISDPNGFPPIIAGDFDATPDSAGIRYLTGLQSLDGHSTHYYDAWKAAGNRGAG 237 Query: 249 KNL------------RNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + IDY + + + Sbjct: 238 PTWTTQNHYAKKTTEQFWHLSDHHRRIDYIFLGSPHHFRGYAR--VVSTRVVLNQPVGKD 295 Query: 291 RLSDHCPISIDY 302 SDH + + Sbjct: 296 WPSDHFGVMAEI 307 >gi|42562445|ref|NP_174435.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] gi|332193241|gb|AEE31362.1| carbon catabolite repressor protein 4-like 4 [Arabidopsis thaliana] Length = 388 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 44/324 (13%), Positives = 87/324 (26%), Gaps = 46/324 (14%) Query: 24 VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 RLVS+NI + + + + + + KNL AD LQE+ Y++ Sbjct: 63 FRLVSYNILAQVYVKSALLPHSPPACLKWKARSHAILSVLKNLQADFFCLQEVDEYDSFY 122 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +R + + A R+ DS S + Sbjct: 123 RNNMDSLGYSGIYIQRTGQRKRDGCAIFYKPSCAELVTKERIEYNDLVDSIKADSVSCSE 182 Query: 142 NRR----------------------------AVELLVEINGKKIWVLDIHLKSFCFLDSL 173 + + IN ++ + + L Sbjct: 183 QKIETSNEGKDSRKDSRDLNDPLVRLKRDCVGIMAAFRINKPFQHIVIVANTHLYWDPEL 242 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------LGNNDD 223 + L + K I+ + E ++AGDFN + Sbjct: 243 ADVKLAQAKYLLSRLAQFKTLISDEFECTPSLLLAGDFNSIPGDMVYSYLVSGNAKPTET 302 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY--- 280 + P + + N +DY + + F+ S ++ Sbjct: 303 IEEEEAPVPLSSVYEVTRGEPKFTNCTPGFTNTLDYIFISPS--DFIKPVSILQLPEPDS 360 Query: 281 -NEDDIKSRGKRLSDHCPISIDYD 303 + SDH PI +++ Sbjct: 361 PDVVGFLPNHHHPSDHLPIGAEFE 384 >gi|109897358|ref|YP_660613.1| endonuclease I [Pseudoalteromonas atlantica T6c] gi|109699639|gb|ABG39559.1| Endonuclease I [Pseudoalteromonas atlantica T6c] Length = 1503 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 91/328 (27%), Gaps = 53/328 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLW-----------KNSVKRTTSDYTLLRQYAKNLDADIVF 70 +++ S N+ VS +S +DADIV Sbjct: 1114 GNLKVASLNVLNYFNTLDVSPNVCGPSNLECRGADSEIELERQRAKTLAALLAMDADIVG 1173 Query: 71 LQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 L E+ + +AV + + +T ++ + I A+ + V V+ Sbjct: 1174 LMEVENNGFGANSAVGDLVSGLNDVLGANTYATVDAGSAIGTDAITVALIYKPAVVSVVG 1233 Query: 126 QSYPLLGAKDSFSRAGN-------RRAVELLVE--INGKKIWVLDIHLKS-----FCFLD 171 Q L + G R A+ N +++ V H KS D Sbjct: 1234 QPAILDSSNSISDDDGPLFLDTKNRPALNQKFALVANNEELVVSVNHFKSKGSSCGAGDD 1293 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 ++ A+ L +++Q+ P +I GD N + Sbjct: 1294 DTTTGQGNCNLTRTRAAEALTTFLSQQFS-DTPTLIIGDLNSYAMEEPILKILQQ----- 1347 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-- 289 K + +D+ + ++ + I +E + Sbjct: 1348 GYTDLANKFGGDEAYSYSFGGEFGYLDHALASATLVDQIVDTTEWHINADEPIVFDYNVE 1407 Query: 290 ---------------KRLSDHCPISIDY 302 R+SDH P+ I Sbjct: 1408 FKSDQQLIDYYAPDAYRMSDHDPVVISL 1435 >gi|239503516|ref|ZP_04662826.1| putative extracellular nuclease [Acinetobacter baumannii AB900] Length = 812 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 48/327 (14%), Positives = 94/327 (28%), Gaps = 54/327 (16%) Query: 21 AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSY 77 A +R+ S+N+ N + G + + + D + K++DAD+ L E+ + Sbjct: 461 ANHIRVASFNVLNYDNGATGFPTERGANTQAEFDKQHRKIVSALKSIDADVYGLMEITNN 520 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + R ++ I AI K V+ L ++ L Sbjct: 521 GYGPNSAIAHLTSALGPDWKYVIPENLDRLGSDVIAVAIIYNSKRVKPLNKAVVLDLGD- 579 Query: 136 SFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPS--------CSLLS 185 NR + + K V+ HLKS N+ Sbjct: 580 -----KNRTTLAQTFQAVRGNKTFTVIPNHLKSKGCSGVDANSSDADQNDGQGCWNPTRV 634 Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + + W+ + ++ GD N N ++ + Sbjct: 635 KAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAP----ILAFEKANYKVLLNDAKVGQ 690 Query: 244 RCNANKN----------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG---- 289 A +D+ + D + Y +++ I +E + Sbjct: 691 GTQAYSYVFGVASDANGNGGAGNLDHAIADADLYPKVVRTFAWHINADEPTVLDYNEEYK 750 Query: 290 -------------KRLSDHCPISIDYD 303 R SDH P+ +D D Sbjct: 751 TDEQKALFYGEDAYRSSDHDPVIVDLD 777 >gi|163848327|ref|YP_001636371.1| endonuclease/exonuclease/phosphatase [Chloroflexus aurantiacus J-10-fl] gi|222526243|ref|YP_002570714.1| Endonuclease/exonuclease/phosphatase [Chloroflexus sp. Y-400-fl] gi|163669616|gb|ABY35982.1| Endonuclease/exonuclease/phosphatase [Chloroflexus aurantiacus J-10-fl] gi|222450122|gb|ACM54388.1| Endonuclease/exonuclease/phosphatase [Chloroflexus sp. Y-400-fl] Length = 1118 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 44/338 (13%), Positives = 87/338 (25%), Gaps = 54/338 (15%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT-----------SDYTLLRQYAKN 63 +V + +V N+ + T Sbjct: 505 TTPPAVGGSITVVGMNLLNYFNTFSGCTNGLTGGPTDCRGAENATEFTRQTAKTVATIVA 564 Query: 64 LDADIVFLQEMGSY-----NAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHT 112 L+ ++ L E+ + +A+A + F + N+ I Sbjct: 565 LNPAVLGLMEVENDGYGPASAIADLVNRLNSATAPGTYAFIDVDAATGQVDALGNDAIKV 624 Query: 113 AIAVRKKNVRVLQQSYPL-----LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 I + V + Q+ L + DS R A V +G + V H KS Sbjct: 625 GIIYQPALVTPVGQTAALNTPAFITGGDSAPRNRAALAQAFEVNASGARFVVSVNHFKSK 684 Query: 168 CFLDSLENTYSPSCS---LLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNND 222 + + + + A L W+ + +I GD N Sbjct: 685 GSPCDAPDAGDGQGNCNIVRTNAANTLAAWLASDPTGINDPDVLIIGDLNSYAKEDPI-- 742 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + ++ + + + +DY + + + + + I +E Sbjct: 743 ---RALETQGYENLVERFGGANAYSYVFNGQWGYLDYALANASLSPQIAGIAEWHINADE 799 Query: 283 DDIKSRG-----------------KRLSDHCPISIDYD 303 + R SDH PI + D Sbjct: 800 PSVLDYNTNFKSAGQISSLYAPDFYRTSDHDPIVVGLD 837 >gi|158521044|ref|YP_001528914.1| endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans Hxd3] gi|158509870|gb|ABW66837.1| Endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans Hxd3] Length = 347 Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 59/363 (16%), Positives = 112/363 (30%), Gaps = 86/363 (23%) Query: 2 IRKYVLALVFFLVPCT--ASVAQKVRLVSWNINTLSE--QEGVSLWKNSVKRTTSDYTLL 57 R + + +V C+ A A+ L S+N+ L + +G T + Sbjct: 7 RRLISIISLLVIVACSGPAPAARTFTLASYNVENLFDAVYDGTEYDDYVPGSTQGWNKKM 66 Query: 58 RQY--------AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 ++ADIV LQE+ S A+ + + +R ++ + Sbjct: 67 ADIKTANTAEAIGAINADIVCLQEVESKIALKNLLTRLNTP----KQRYPFYAIAQTPTP 122 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 + A+ ++P++ +D G R ++ ++ I+ K + V H KS Sbjct: 123 VRCAL----------VSTFPIVHTQDIVPGEGQRAILKAVLSIDKKHLTVFICHWKSKSG 172 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 +S A L+ I + FVI GDFN N D + D Sbjct: 173 PES----------RRIPYAAALRKAIEK-LPPNTDFVITGDFNANYNEHQTFADVARFND 221 Query: 230 PND------------------------------SLIRFPKEKDSRCNANKNLRNKIPIDY 259 + + + R + K D Sbjct: 222 TQGVTGINHVIKTLHNDALVDEKILADSRNELLLYNLWLELPEYRRWSYNFFGKKESPDN 281 Query: 260 FVMDQNAYKF----LIQESFS----EILYNEDDIKSR-----------GKRLSDHCPISI 300 ++ ++ Y + SF ++ ++ + + GK SDH PI Sbjct: 282 MLVPRSLYDKKGIDYVDNSFDRVHADLFFDNNRVYRWQRADRGKGRHLGKGYSDHLPIRA 341 Query: 301 DYD 303 + Sbjct: 342 TFT 344 >gi|299532507|ref|ZP_07045897.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni S44] gi|298719454|gb|EFI60421.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni S44] Length = 291 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 93/309 (30%), Gaps = 49/309 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVA- 81 + +++WN+ +G+ SV+R + + ++ D++ LQE+ +Y + Sbjct: 1 MNILTWNVQWCCGMDGLV----SVERIVRHALQMGE--QSGGLDVLCLQEIAVNYPDLQG 54 Query: 82 ----KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 ++ + + + S+ + + +L Q Y L + Sbjct: 55 RPGDQLAELKALLPGWQIFFGASVDEFTSSGHQRFGNLIATRLPVLLVQHYLLPMPAQAD 114 Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R R + V+ + ++ HL+ F + + + L QA L D Sbjct: 115 MRCMQRMCSVVTVDDAALGPVRIMTTHLEYFSARQRM--AQAGALRALQMQACALADAPP 172 Query: 197 QKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDS-----------LIR 236 Q P+ V+ GDFN + + + + + Sbjct: 173 QPASDGSPYQTKPHTRHAVLCGDFNFEPHEPEYAVLSAPWVAGEEGCLQAGQWRNSWDVL 232 Query: 237 FPKEKDSRCNA---NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 +P + D + + + + S + S Sbjct: 233 YPGQPQPPTFRLVDRTWGAEPGACDLIWVSDSLCQRVHTWSV-----------DSATQAS 281 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 282 DHQPVMLTL 290 >gi|256422393|ref|YP_003123046.1| exodeoxyribonuclease III Xth [Chitinophaga pinensis DSM 2588] gi|256037301|gb|ACU60845.1| exodeoxyribonuclease III Xth [Chitinophaga pinensis DSM 2588] Length = 259 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 83/301 (27%), Gaps = 69/301 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N ++ +L ++ + D+V LQE Sbjct: 1 MKIATYNVNGVNG----------------RLPVLLRWLEESAPDVVCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R ++ +A+ +N+++ + L G + +R Sbjct: 35 LKAPQEKFPEQAIRDAGYNAIWHGQKSWNGVAILARNLQIEEIRRALPGDPEDVH---SR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++L + + Y + L + V Sbjct: 92 YIEAVI----NGDFILGCLYLPNGNPAPGPKFDYK------LNWFKRLTAHAKELLAQDV 141 Query: 204 PFVIAGDFNRKINYLG---NNDDFWKTIDPND-----------SLIRFPKEKDSRCNANK 249 P ++ GD+N L + + ++ Sbjct: 142 PVILTGDYNVMPTELDVYKPERWVDDALFRPETRAAFKELVELGWTDAIRKLYPEEKIYT 201 Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+F++ + K L D ++ SDH P+ I Sbjct: 202 FWDYFRDAYGRNAGLRIDHFLLSPHFGKRLKAAGV-------DRDVRGWEKTSDHAPVWI 254 Query: 301 D 301 + Sbjct: 255 E 255 >gi|218245849|ref|YP_002371220.1| exodeoxyribonuclease III [Cyanothece sp. PCC 8801] gi|257058897|ref|YP_003136785.1| exodeoxyribonuclease III [Cyanothece sp. PCC 8802] gi|218166327|gb|ACK65064.1| exodeoxyribonuclease III [Cyanothece sp. PCC 8801] gi|256589063|gb|ACU99949.1| exodeoxyribonuclease III [Cyanothece sp. PCC 8802] Length = 262 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 98/306 (32%), Gaps = 71/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ +WN+N + + + K + D++ +QE + + Sbjct: 1 MKVATWNVN----------------SIRTRQPHVIDWLKTNNIDVLCVQETKVIDQDFPK 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 F + + ++ ++ N AI R+ V P++G + Sbjct: 45 TPFEELGYHLYIYGQKAYN----------GVAIFSRQPLEDVTMGFTPIVGESLAEDFDE 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK-KE 200 +R + + + + ++++++ + + + + Y + + LK ++TQ ++ Sbjct: 95 QKRVITGIF----QGVRIVNLYVPNGSAVGTEKYDYK------LRWLKVLKQYLTQFLEK 144 Query: 201 SLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 S I GDFN + + K I F K Sbjct: 145 SKQELCICGDFNIALEDKDIYNSKSKEDHIMSSPLERESLKDILDLGLKDAFRKFTSEG- 203 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + ID+ + Y+ I + D + + SDH Sbjct: 204 GQFSWWDYRSGGFQRNRGWRIDHHYLTPKLYEKAISCTI-------DIEPRKLTQPSDHA 256 Query: 297 PISIDY 302 P+ +++ Sbjct: 257 PVIVEF 262 >gi|121595605|ref|YP_987501.1| endonuclease/exonuclease/phosphatase [Acidovorax sp. JS42] gi|120607685|gb|ABM43425.1| Endonuclease/exonuclease/phosphatase [Acidovorax sp. JS42] Length = 291 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 85/313 (27%), Gaps = 61/313 (19%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEMGSYNAVAKVF 84 LV+WN +G D + QYA L D D++ LQE+ Sbjct: 3 LVTWNTQWCRGLDG-----------RVDPARIVQYALALGDVDVLCLQEIAVNYPGLAGA 51 Query: 85 PKNTWCIFYSTERLINH-------SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 P + S + + + + + Q +PL D+ Sbjct: 52 PGDQVAQVQSALPAGWQVFFGAAVDEWTAAGRQRFGNLIATRLPVLQLQHHPLPYPPDAG 111 Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R+ R L V+ + V+ HL+ + + + + L QA Sbjct: 112 VRSMPRLCSVLTVQDPALGPVRVMTTHLEYYSKPQRM--AQALALRALHLQACAQAAQPP 169 Query: 197 QKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 Q PF V+ GDFN + + + + + +A Sbjct: 170 QGLADGSPFQPKAHTPHAVLCGDFNLQAHE-PEYAVLAAALADEEGATAGQAGQPPLWDA 228 Query: 248 N------------------KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + D+ + + + + Sbjct: 229 WRLLHPGAPQPPTFCVFDQTYAPQPLACDFIWVSDSLRSRVRAVRVDGVT---------- 278 Query: 290 KRLSDHCPISIDY 302 + SDH P+ ++ Sbjct: 279 -QASDHQPVLLEL 290 >gi|313620750|gb|EFR92007.1| endonuclease/exonuclease/phosphatase family protein [Listeria innocua FSL S4-378] Length = 257 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 41/286 (14%), Positives = 77/286 (26%), Gaps = 36/286 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + ++NI K TL + D + ++E + + Sbjct: 2 FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEESLLPQ-MRDM 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 W F + ++A + P + + S + R Sbjct: 54 KEMLDWDYFGVGRDDGYEKGEFTAVFYNSARFRLLQEGHFWLSETPDVPSIHSTAM-FPR 112 Query: 144 RAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 V +E +G++ ++ + HL A L Sbjct: 113 ICVWGQLEDSTDGRQFYIFNTHLDHVS-------------EEARLFASQLLLQKAGLIAE 159 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPID 258 +P ++ GDFN + N K D K + + LR ID Sbjct: 160 NLPVILLGDFNTEPETPTYNFITKKYQDAQLISQTPIKGPIGSFHDFQPLRPENELEKID 219 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 Y + + F Y + G SDH P++ ++ Sbjct: 220 YIFVSKE---------FRVHSYKTITDQVDGCSASDHFPVTATLEW 256 >gi|91217808|ref|ZP_01254763.1| hypothetical protein P700755_06530 [Psychroflexus torquis ATCC 700755] gi|91184009|gb|EAS70397.1| hypothetical protein P700755_06530 [Psychroflexus torquis ATCC 700755] Length = 271 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 49/305 (16%), Positives = 105/305 (34%), Gaps = 48/305 (15%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 L + L+ + +V++ SWNI L ++ + + + + D Sbjct: 7 LVVFLSLLFVSTISLAQVKISSWNIRHLGNS-----------KSKIEIEFMAETLR--DF 53 Query: 67 DIVFLQEM----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 D V +QE+ G AVAK+ + + ++ + + A + ++ Sbjct: 54 DAVAIQEVVAGNGGAQAVAKLADELNRKGSRWDYVVSKPTQGGTYSSERYAFLWKTSRLK 113 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 V ++++ L R + + + +++IH Sbjct: 114 VDRKAWLDLD----CIEEFEREPYFIRFKFENQDFTLVNIHAVPKSKQPE---------- 159 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 Q+ ++LK + + F+ GDFN ++ + + + +K Sbjct: 160 ---QELKYLKLYPELYPDEN--FIFLGDFNLPESHS-----VFNPLKSKGFISALVNQKT 209 Query: 243 S---RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 S +C A D +D A+K L ++ Y + +SDH PI Sbjct: 210 SLKMKCKAGI--CLASEYDNIFIDSKAFKILKTG--VDLFYETFTDLKSARMISDHIPIW 265 Query: 300 IDYDF 304 +++DF Sbjct: 266 VEFDF 270 >gi|312141216|ref|YP_004008552.1| exodeoxyribonuclease iii [Rhodococcus equi 103S] gi|311890555|emb|CBH49873.1| exodeoxyribonuclease III [Rhodococcus equi 103S] Length = 266 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 67/307 (21%), Gaps = 70/307 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + + D D++ +QE + Sbjct: 1 MRIATWNVN----------------SVRARTDRIVDWLARTDTDVLAMQETKCKDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY--PLLGAKDSFSRAG 141 Y + +A+ + Q G Sbjct: 41 ------QFPYERFTEAGYEVAHVGLSQWNGVAIASRIGLEDVQVGFADQPGFNKDPEAEA 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK-- 199 R A + + G + V +++ + L Y + L+ Sbjct: 95 TREARAIGATVGG--VRVWSLYVPNGRELTDPHYVYK------LEWLAKLRADAEGWLAG 146 Query: 200 ESLVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSR 244 + GD+N D + Sbjct: 147 NPDAQIALVGDWNVAPTDEDVWDPAFFEGKTHTSQPERDAFDAFAEAGFADVVRPHTPGP 206 Query: 245 CNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 IDY + + D + +GK SDH Sbjct: 207 -GVYTYWDYTQLRFPKRQGMRIDYVLGSPAFAARVTGAHI-------DRDERKGKGASDH 258 Query: 296 CPISIDY 302 P+ +D Sbjct: 259 APVVVDL 265 >gi|221068733|ref|ZP_03544838.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni KF-1] gi|220713756|gb|EED69124.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni KF-1] Length = 291 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 89/305 (29%), Gaps = 39/305 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 + ++SWN+ +G SV+R + + A L D++ LQE+ Sbjct: 1 MNILSWNVQWCCGMDGQV----SVERIVRHALQMGEQAGGL--DVLCLQEIAVNYPDLQG 54 Query: 75 ---GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + + P S + + V + + Q +PL Sbjct: 55 QPGDQPAELKALLPGWQIVFGASVDEFTSRGH------QRFGNLVATRLPLLQLQHHPLP 108 Query: 132 GAKDSFSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 D+ R R + V + + ++ HL+ F + + L QA Sbjct: 109 MPADADVRCMQRMCSVVTVADAALGPVRIMTTHLEY--FSKRQRMAQAGALRDLQMQACA 166 Query: 191 LKDWITQKKESLVPF---------VIAGDFNRKINYLGNN--DDFWKTIDPNDSLIRFPK 239 L D Q P+ V+ GDFN + + W + + Sbjct: 167 LADAPPQPASDGSPYQTKPHTRHAVLCGDFNFEPHEPEYAVLSAPWAAGEQGCLQAGQWR 226 Query: 240 EKDSRCNANKNLRNKIPI-DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + D + L+ S S + + SDH P+ Sbjct: 227 NSWDLLHPGQPQPPTFRLVDRTWGAEPGACDLLWVSDSLCQHVQAWRVDSTTEASDHQPV 286 Query: 299 SIDYD 303 + Sbjct: 287 MLTLS 291 >gi|194367742|ref|YP_002030352.1| exodeoxyribonuclease III [Stenotrophomonas maltophilia R551-3] gi|194350546|gb|ACF53669.1| exodeoxyribonuclease III [Stenotrophomonas maltophilia R551-3] Length = 258 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 83/304 (27%), Gaps = 73/304 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++ SWN+N+L+ L Q+ K DIV +QE Sbjct: 3 PMKIASWNVNSLN----------------VRLPHLEQWLKEFGPDIVGIQET-------- 38 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 S + + + +A+ + + G +D R Sbjct: 39 --KLEDHKFPDSALIAAGYRSVFAGQKTYNGVALLSREP-AQDVQIGIPGFEDEQKR--- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 ++ + V+++++ + + + + Y + + + WI ++ + Sbjct: 93 ------VIAGTFGDLRVINLYVVNGQDIGTDKYEYK------LRWLEAVHAWIAEELQRH 140 Query: 203 VPFVIAGDFNRKINYLGNNDD-FWKTID--------------PNDSLIRFPKEKDSRCNA 247 ++ GDFN + +D W L + + Sbjct: 141 PKLIVMGDFNIAPDARDVHDPEVWNENHILTSTAERGALNKLLQLGLHDGFRLHNDEAGV 200 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID ++ + D +R SDH P Sbjct: 201 FSWWDYRAAGFRRDLGLRIDLTLVSDALKGSAVASGI-------DREPRTWERPSDHAPA 253 Query: 299 SIDY 302 + Sbjct: 254 WVQI 257 >gi|188583700|ref|YP_001927145.1| exodeoxyribonuclease III Xth [Methylobacterium populi BJ001] gi|179347198|gb|ACB82610.1| exodeoxyribonuclease III Xth [Methylobacterium populi BJ001] Length = 269 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 28/306 (9%), Positives = 76/306 (24%), Gaps = 66/306 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + +WNIN + ++ + D++ LQE ++ Sbjct: 3 LTVTTWNIN----------------SVRLRIESVLRFLREEQPDVLCLQETKCP---DEL 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + + +A+ + + + D+ R Sbjct: 44 FPLKAFKG------SGYENIVFAGQKGYNGVAIVSRFPLLTRDVMRFCERADA------R 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +L G ++ D +P + L+ W ++ Sbjct: 92 HISAVLGPEAGPAAGIVLHDFYVPAGGDVPHRDLNPKFAHKLDFLSELRAWGGRRVSG-- 149 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N + + + Sbjct: 150 PAILVGDLNVAPLEHDVWSHKQLLDVVSHTPVETEALETLRGEAGWIDAARLLTPEPEKI 209 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + + + + ++ SDH P Sbjct: 210 YTWWSYRSPNWELANKGRRLDHAWVSPDLAGTVRKVAVFH-------AARGWEKPSDHVP 262 Query: 298 ISIDYD 303 +++ + Sbjct: 263 VTLSLE 268 >gi|295676960|ref|YP_003605484.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1002] gi|295436803|gb|ADG15973.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1002] Length = 283 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 28/302 (9%), Positives = 82/302 (27%), Gaps = 68/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 V++ +WN+N+L + + + D++ LQE Sbjct: 26 VKIATWNVNSL----------------KVRQQHVIDWLASSGTDVLCLQE---------- 59 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + + + + + +S + F R Sbjct: 60 LKLPDEKFPRAELEAVGYRSWYAGQKTYNGVGILVREGVNVDESSIVRNIP-GFEDPQQR 118 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++ + + + + Y + L DW+ + Sbjct: 119 VIAATV-----DGVRIISAYFPNGQAPGTDKFAYK------LRWLDALHDWLATEMTLHP 167 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANK 249 + GD+N +D + + + L+ ++ + + Sbjct: 168 KLALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAAFVRLIGLGLLDAFRQFEQQEKIYS 227 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ + + D + + + SDH P+ Sbjct: 228 WWDYRMMAFRRNAGLRIDHILLSKALSDICKAC-------DIDKVPRKWDQPSDHAPVFA 280 Query: 301 DY 302 Sbjct: 281 QL 282 >gi|50289263|ref|XP_447062.1| hypothetical protein [Candida glabrata CBS 138] gi|74609806|sp|Q6FRT2|CCR4_CANGA RecName: Full=Glucose-repressible alcohol dehydrogenase transcriptional effector; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase gi|49526371|emb|CAG59995.1| unnamed protein product [Candida glabrata] Length = 873 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 41/324 (12%), Positives = 88/324 (27%), Gaps = 39/324 (12%) Query: 20 VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS- 76 + ++S+N + + + L++ N + DI+ LQE+ + Sbjct: 534 QKKSFTMLSYNTLCQHYATPKMYRYTPSWALSWDYRREKLKEQILNFNTDIICLQEVEAK 593 Query: 77 --YNAVAKVFPKNTWC-IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + K+ + +F++ R +DS + ++L + Sbjct: 594 TFEDFWQPLLEKHGYTGLFHAKTRAKTMQSKDSKKVDGCCAFYKTSKFKMLFKECVDFSG 653 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLK-----SFCFLDSLENTYSPSCSLLSQQA 188 + R L +N + ++ + + + + + Q Sbjct: 654 LWMKHKKFQRTEDYLNRAMNKDNVAIVMKLQHIQSGEIMWLVTTHLHWDPKFNDVKTFQV 713 Query: 189 QWLKDWITQKKES--------LVPFVIAGDFNRKINYLGN--------------NDDFWK 226 L D + + P VI GD N ++ D + Sbjct: 714 GVLLDHMETLLKEQNPKQDVKKYPLVICGDLNSYLSSSVYELFSTGRVQHHHDGKDRDFG 773 Query: 227 TIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILY 280 ++ + C N IDY Q + Sbjct: 774 YFSEDNFSHNLALKSSYNCIGELAFTNFTPSFTDVIDYIWFSSQALRVRGLLGEVDSEYV 833 Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304 + K SDH P+ Y+F Sbjct: 834 SNFIGFPNDKFPSDHIPLLGRYEF 857 >gi|163941424|ref|YP_001646308.1| exodeoxyribonuclease III Xth [Bacillus weihenstephanensis KBAB4] gi|229012920|ref|ZP_04170085.1| Exodeoxyribonuclease [Bacillus mycoides DSM 2048] gi|163863621|gb|ABY44680.1| exodeoxyribonuclease III Xth [Bacillus weihenstephanensis KBAB4] gi|228748174|gb|EEL98034.1| Exodeoxyribonuclease [Bacillus mycoides DSM 2048] Length = 252 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + +Y + +ADI LQE+ + + Sbjct: 1 MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQSGQIDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ + + + ++ A+ K + + D R Sbjct: 47 NPEGYYTYW-----------NYAVKKGYSGTAIFTKKEPISVTYGLGIEEHDQEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + + L + Sbjct: 92 -----VITLEFEDFYMITLYTPNSKRGLERLDYRMKWEDDFRAYIKRLNE--------KK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V GD N + + + + + + A Sbjct: 139 SVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTRTLEEGFVDTYRYLYPDQEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV+ + + + + SDHCP+ Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDKITEAKIN-----------SEIMGSDHCPVE 247 Query: 300 IDYDF 304 + +F Sbjct: 248 LHINF 252 >gi|152969375|ref|YP_001334484.1| putative DNase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893840|ref|YP_002918574.1| putative DNase [Klebsiella pneumoniae NTUH-K2044] gi|150954224|gb|ABR76254.1| putative DNase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546156|dbj|BAH62507.1| putative DNase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 253 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 40/291 (13%), Positives = 80/291 (27%), Gaps = 49/291 (16%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + + +++ N + LR +++ ADIV LQE+ Sbjct: 4 PTAGFSLNVLTINTHKGFTAFNRRF----------ILPELRDAVRSVSADIVCLQEVMGA 53 Query: 78 NAVAKV----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + V + +P T F + +++ + H AV + Sbjct: 54 HEVHPLHIENWPDTTHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRFPIE-----YYE 108 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 S R + + I + I + D Q L Sbjct: 109 NRDISVGNGEKRGLLYCRIVPPRSGITIHVICVHLGLRADQ-----------RQAQLTML 157 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 +W+ + P V+AGDFN ++ F + + Sbjct: 158 AEWVNT-LPAGEPVVVAGDFNDWRQQANQPLKAQAGLEE-----IFTRARGRPARTFPVS 211 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + + LSDH P+S++ Sbjct: 212 FPLLRLDRIYVKNAHASRPKALALKQ-----------WRHLSDHAPLSVEI 251 >gi|238928084|ref|ZP_04659844.1| exodeoxyribonuclease III Xth [Selenomonas flueggei ATCC 43531] gi|238884044|gb|EEQ47682.1| exodeoxyribonuclease III Xth [Selenomonas flueggei ATCC 43531] Length = 250 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 78/303 (25%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R VSWN+N L ++ + LDAD LQE + Sbjct: 1 MRFVSWNVNGLRAALKKGFMES---------------FRELDADAFCLQETKMQEG-QAI 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + + + A+ + + + A D+ R Sbjct: 45 LDLPGYEQYFYSAEKKGY----------SGTAIFTRVKPLSVAYGIGISAHDNEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++++ ++ + + ++ + Sbjct: 91 -----VITMEFDDVYLVTVYTPN-------AKRALERLDYRMMWEDAFRAFL-LGLRAKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + + F R A Sbjct: 138 PVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGKFTELLQAGFIDTFRALYPDRTGAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ + ++ SDHCP+S Sbjct: 198 TWWSYLRHARETNAGWRIDYFLVSAELRDRIAAAEIHADIF-----------GSDHCPVS 246 Query: 300 IDY 302 + Sbjct: 247 LTL 249 >gi|198276716|ref|ZP_03209247.1| hypothetical protein BACPLE_02915 [Bacteroides plebeius DSM 17135] gi|198270241|gb|EDY94511.1| hypothetical protein BACPLE_02915 [Bacteroides plebeius DSM 17135] Length = 252 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 79/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L R LDAD LQE Sbjct: 2 IKLISWNVNGLRACCDKGF---------------RDIFTQLDADFFCLQETKMQEG-QLD 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K+ + + D R Sbjct: 46 LSFEGYTSYWNYAEKKGY----------SGTAIFTKHQPLQVTYGLGIDEHDHEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +K +++ ++ + + Q L Sbjct: 92 -----VITLEMEKFFLVTVYTPNSQDGLKRLDYRMTWDDDFRAYLQKLDQ--------SK 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + ++ + + F + N Sbjct: 139 PVLVCGDLNVAHKEIDLKNPKTNRMNAGFTDQEREKFQLLLDAGFIDTFRYFYPEQTNIY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ + L + ++ SDHCP+ Sbjct: 199 SWWSYRFKAREKNAGWRIDYFLASASLADKLKEAKIHTEIF-----------GSDHCPVE 247 Query: 300 IDYD 303 + + Sbjct: 248 VTVE 251 >gi|16800960|ref|NP_471228.1| hypothetical protein lin1894 [Listeria innocua Clip11262] gi|16414395|emb|CAC97124.1| lin1894 [Listeria innocua Clip11262] gi|313623313|gb|EFR93545.1| exodeoxyribonuclease III [Listeria innocua FSL J1-023] Length = 251 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 83/304 (27%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L +Y + +DADI LQE Sbjct: 1 MKLISWNVNGLRAAVKKGF---------------LEYFEEVDADIFCLQETKLQEG-QIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + Q + D+ R Sbjct: 45 LDLPAYKDYWN----------YAVKKGYSGTAIFTKVEPLSVQYGLGVPEHDTEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + +++ + Sbjct: 91 -----VITLEFEDFYMVTVYTPN-------SQAELKRLDYRMTFEDAILEYVK-NLDKTK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + F +A Sbjct: 138 PVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + L+ + SDHCP+ Sbjct: 198 SWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVL-----------GSDHCPVE 246 Query: 300 IDYD 303 ++ + Sbjct: 247 LELN 250 >gi|327481832|gb|AEA85142.1| exodeoxyribonuclease III [Pseudomonas stutzeri DSM 4166] Length = 263 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 79/304 (25%), Gaps = 70/304 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++++ ++NIN + L ++ + D+V LQE+ + +A Sbjct: 2 DRLKIATFNING----------------IRARLPNLLEWLEREQPDVVCLQELKAQDA-- 43 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 R + +A+ ++ L+ L G D Sbjct: 44 --------DFPIDDIRGAGYGAIWHGQKSWNGVAILARDSEPLEIRRGLPGDPDDSHSRY 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 AV ++ V ++L + + Y + + L + S Sbjct: 96 LEAAVHGVI--------VASLYLPNGNPQPGPKFDYKLA------WFERLIEHAAGLLAS 141 Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246 P V+AGD+N ++ + + Sbjct: 142 GHPVVLAGDYNVVPTDEDIYNPRSWRKDALLQPESRACYERLLAQGWTDALRAQFPDEPV 201 Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ + L D + SDH P Sbjct: 202 YTFWDYFRQHWQKNSGLRIDHLLLSPDLAPCLQAAGV-------DRWVRGQEHASDHAPT 254 Query: 299 SIDY 302 + Sbjct: 255 WVSL 258 >gi|197106478|ref|YP_002131855.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1] gi|196479898|gb|ACG79426.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1] Length = 256 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 79/303 (26%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NI+ L ++ D+V LQE+ + +A+ Sbjct: 1 MRIATYNISN----------------VVKRLPNLLEWLDERRPDVVCLQELKAADAL--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ + + Y L G R Sbjct: 42 -------FPQAELEAAGYGAVWQGERTWNGVAILARGAEPVATRYGLPGDPTD------R 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +A + +NG + V I+L + + Y + L S Sbjct: 89 QARYVEAAVNG--VLVASIYLPNGNPQPGPKFAYKLA------WFDRLIAHAEGLVASGA 140 Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 P +AGDFN L W+ + + Sbjct: 141 PVALAGDFNVVPTALDIYRVKPHTTDALQQPQTRAAWRRLLDQGWTDAVRALHPDAPMFS 200 Query: 249 KNLRNK--------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + +D ++ + L D SDH P+ I Sbjct: 201 FWDYLRNAWDRDAGMRLDAVLLSPSLAPRLRAAGV-------DRDVRGRPGASDHAPVWI 253 Query: 301 DYD 303 + D Sbjct: 254 ELD 256 >gi|167763965|ref|ZP_02436092.1| hypothetical protein BACSTE_02348 [Bacteroides stercoris ATCC 43183] gi|167698081|gb|EDS14660.1| hypothetical protein BACSTE_02348 [Bacteroides stercoris ATCC 43183] Length = 344 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 36/351 (10%), Positives = 81/351 (23%), Gaps = 59/351 (16%) Query: 1 MIRKYVL-ALVFFLVPCTASVAQKVRL---VSWNINTLSEQ------------EGVSLWK 44 M R+ +L A + + K+R+ +N+ L + ++ Sbjct: 1 MNRRLILSAFLVLCLSTGLLAQGKLRVYAAAFYNLENLWDTEDNPDNPGDDDFTPGGKYE 60 Query: 45 NSVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTER 97 + + + + L D I+ + E+ + + + S Sbjct: 61 WTQVKYEQKLQNVAKVISQLARDYCPAGPAIIGISEVENKKVLEDLVKTEP---IASLGY 117 Query: 98 LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 I H + + I A + + D R + + + G+ Sbjct: 118 RIVHFESPDHRGIDVAALYNPRLFTFVSARTYPFAKPDMPGYK-TRDQLLVSGILAGEPF 176 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 ++ H S + + A L +I GD N + Sbjct: 177 HMIVNHWPSRYGGSKSSPLREFAAGITRHIADSLHA-----DNPQAKVIIVGDMNDDPDN 231 Query: 218 LGNNDDFW-----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 + + + P K + + D ++ N Sbjct: 232 KSCSQVLGAVKSIREVKPGGYYNATWKLFEQGIGSLCYQNQWNLFDQQIVSGNLIGKDRS 291 Query: 273 -------------------ESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + SDH P + Sbjct: 292 TLKFWKSEVFNRPFLIQQEGKYKGYPLRTFSGTTFQNGYSDHLP---TLTY 339 >gi|208222|gb|AAA72974.1| pancreatic DNAase I [synthetic construct] Length = 261 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 92/285 (32%), Gaps = 30/285 (10%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-- 81 +++ ++NI T E S + + + + + DIV +QE+ + VA Sbjct: 2 LKIAAFNIRTFGE---------SKMSNATLASYIVRIVRRY--DIVLIQEVRDSHLVAVG 50 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K+ + +++ ++ R V VL G + + + Sbjct: 51 KLLDYLNQDDPNTYHYVVSEPLGRNSYKERYLFLFRPNKVSVLDTYQYDDGCESCGNDSF 110 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R + + K+ I D++ S L Q +W + Sbjct: 111 SREPAVVKFSSHSTKVKEFAIVALHSAPSDAVAEINSLYDVYLDVQQKWHLN-------- 162 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 ++ GDFN +Y+ ++ + + + + + N D V Sbjct: 163 --DVMLMGDFNADCSYVTSSQWSSIRLRTSSTFQWLIPDSADTTATSTNCAY----DRIV 216 Query: 262 MDQNAYKF-LIQESFSEILYNEDDIKSR--GKRLSDHCPISIDYD 303 + + + ++ S + + S +SDH P+ + Sbjct: 217 VAGSLLQSSVVPGSAAPFDFQAAYGLSNEMALAISDHYPVEVTLT 261 >gi|119716549|ref|YP_923514.1| endonuclease/exonuclease/phosphatase [Nocardioides sp. JS614] gi|119537210|gb|ABL81827.1| Endonuclease/exonuclease/phosphatase [Nocardioides sp. JS614] Length = 929 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 88/355 (24%), Gaps = 72/355 (20%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGV--------------------------SLWKNSV 47 +V +RL ++N+ G + Sbjct: 478 TAAPEAVGGDIRLATFNVLNYFPTTGADYEAAGLGTCTYYNDRAGNHITVNRCGTDASPG 537 Query: 48 KRTTSD-------YTLLRQYAKNLDADIVFLQEMGSY---------------NAVAKVFP 85 R +D + NL A IV L+E+ + +A+ Sbjct: 538 PRGAADDVNLQRQQAKIVAAIDNLGASIVSLEEIENSVKFGLDRDYAVSTLVDALNAAAG 597 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA-KDSFSRAGNRR 144 W S + + + I TA + +V ++ S+ L G+ + +R + Sbjct: 598 SGVWAYAPSPDAADLPT-VAEQDVIRTAFIYKPADVSLVGPSHVLTGSAAFADAREPLAQ 656 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SL 202 + + V+ H KS + QA+ L D+ Q Sbjct: 657 GFKATGAPDADAFLVIVNHFKSKGSGVDDGTGQGNANPDRIAQAEALSDFAIQVAAGLDT 716 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 + GDFN + D +D+ + Sbjct: 717 DAVFLTGDFNSYTQEDPLQVLY------GAGYDNLESTTDPEETTYSFDGLAGSLDHVLA 770 Query: 263 DQNAYKFLIQESFSEILYN--------------EDDIKSRGKRLSDHCPISIDYD 303 A + I + D R SDH P + D Sbjct: 771 SPAAAAMVTGVDIWNINADESIAFEYSRYNYNATDFYAPGPYRASDHDPEVVGID 825 >gi|159029855|emb|CAO90909.1| xthA [Microcystis aeruginosa PCC 7806] Length = 262 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 94/307 (30%), Gaps = 73/307 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ +WN+N S + + + +++ LQE + + Sbjct: 1 MKIATWNVN----------------SIRSRQDQVINWLQLNPVEVLCLQETKVIDRDFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR--VLQQSYPLLGAKDSFSR 139 + F + ++ S + +A+ + + P++G + Sbjct: 45 EAFESLGYHLYIS------------GQKAYNGVAIFSQKPLDDITVGFSPIIGENLTGEL 92 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 +R + ++ I ++++++ + LDS + Y + + L+ ++ + Sbjct: 93 DEQKRLITGVI----GDIRIINLYVPNGSSLDSDKYIYK------LKWLETLRKYLDKII 142 Query: 200 ES-LVPFVIAGDFNRKINYLGNNDDFWKTID--------------PNDSLIRFPKEKDSR 244 S I GDFN + D K L ++ S Sbjct: 143 NSQPQELCICGDFNIALEDKDIYDPKGKENHIMSSAKEREALEKVLEIGLQDAFRKFTSA 202 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + ID+ + Y+ + D + ++ SDH Sbjct: 203 AGHYSWWDYRSGGFARNRGWRIDHLYLTPQLYEKAVNCLI-------DREPRKQEKPSDH 255 Query: 296 CPISIDY 302 P+ ++ Sbjct: 256 TPVILEI 262 >gi|158421717|ref|YP_001523009.1| exodeoxyribonuclease III protein [Azorhizobium caulinodans ORS 571] gi|158328606|dbj|BAF86091.1| exodeoxyribonuclease III protein [Azorhizobium caulinodans ORS 571] Length = 290 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 31/325 (9%), Positives = 84/325 (25%), Gaps = 69/325 (21%) Query: 9 LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 ++ L+ A A + + +WNIN ++++ + L D+ Sbjct: 4 ILTCLLLPPAVAALSLTVCTWNIN----------------SVRIRLDIVKETVERLKPDV 47 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + LQE + + + L + +A K + Sbjct: 48 LCLQETKCQDDKFPLA---------AIRELGFPHIALNGQKGWHGVATFSKRPFDAIEKQ 98 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSCS-LL 184 G D+ + + + G + + + ++ + + E + Sbjct: 99 EFCGKGDARH-------IAVTLGGAGGLSAPVTIHNFYIPAGGDEPNPEVNPKFAHKLAF 151 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI---------------NYLGNNDDFWKTID 229 +A + + + ++ GD N ++ D Sbjct: 152 LDEAIAWEKLTEAGRPAGAHAILVGDLNIAPLETDVWNHKQLLSVVSHTPVEVDLLTRFQ 211 Query: 230 PNDSLIRFPKEKDSRC-NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEI 278 I +E + +D+ ++ + Sbjct: 212 AAGPWIDVMREFVPPTEKLFTWWSYRSPDHTVNDRGRRLDHVWTSRSLAGKAKAMTV--- 268 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303 ++ SDH P+++ ++ Sbjct: 269 ----LKEARSWEKPSDHVPVAVTFE 289 >gi|241766910|ref|ZP_04764717.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN] gi|241362633|gb|EER58476.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN] Length = 290 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 85/315 (26%), Gaps = 66/315 (20%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----------- 74 LV+WN +GV S +R L + D++ LQE+ Sbjct: 3 LVTWNTQWCCGLDGVV----SPQRIVQHARALADF------DVLCLQEIAVHYPALEGNA 52 Query: 75 --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + + P + + + + + Q +PL Sbjct: 53 GHDQVALLRALLPGYQVFFGAAVDEWTP-----DGQRQRFGNLIATRLPVLQLQHHPLPY 107 Query: 133 AKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 D+ R+ R V G + V+ HL+ + + + + +L QA Sbjct: 108 PADAGVRSMPRMCTVATVRDPGLGAVRVMTTHLEFYSKRQRM--AQARALRVLHAQACAH 165 Query: 192 KDWITQKKESLVPF---------VIAGDFNRKINYLG-------------NNDDFWKTID 229 + PF V+ GDFN + + + Sbjct: 166 AVAPPEASGDGSPFQSKAHTPHAVLCGDFNFEPHEPEHAAICAPAGADDSEGAPLGMRLW 225 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + L+ + P D+ + + + + + Sbjct: 226 DSWRLLHAAAPQPPTFRLYDRRYGPEPGSCDFVFVSDSLKGRVQR-----------FVVD 274 Query: 288 RGKRLSDHCPISIDY 302 + SDH P+++ Sbjct: 275 AATQASDHQPVAVSI 289 >gi|126335204|ref|XP_001363714.1| PREDICTED: similar to reverse transcriptase/ribonuclease H/putative methyltransferase [Monodelphis domestica] Length = 282 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 40/284 (14%), Positives = 82/284 (28%), Gaps = 30/284 (10%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-- 81 +R+ ++NI + E + + + DI +QE+ VA Sbjct: 23 LRIAAFNIRSFGEN---------KMSNDTISDYIVRILNQY--DIALVQEVRDKYLVAVG 71 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K+ K S + + ++ R V VL Y G + Sbjct: 72 KLLDKLNRETSNSYHFVASEPLGRNSYKERYLFVFRPDKVSVLDSYYYDDGCTPCGNDTF 131 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R V + + I D++ + L + +W + Sbjct: 132 SREPVVVKFSSPTTVVKEFVIVPLHAAPKDAVSEIDALYDVYLDVRLRW----------N 181 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 + + GDFN +Y+ + + + + + + D V Sbjct: 182 MEDIMFMGDFNADCSYVTPSQWPSIRLRTSSTFQWLIPDTADTTVTPTDCAY----DRIV 237 Query: 262 MDQN-AYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 + ++ S + + S G L SDH P+ + Sbjct: 238 VSGRKLQSAIVPGSATIFDFQAAYNLSSGIALAISDHYPVEVTL 281 >gi|332884883|gb|EGK05138.1| hypothetical protein HMPREF9456_03051 [Dysgonomonas mossii DSM 22836] Length = 290 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 44/319 (13%), Positives = 98/319 (30%), Gaps = 47/319 (14%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++KY+++ V F + AQ + ++N+ + + ++WK+ + + + Sbjct: 1 MKKYLISAVLF-IAALTLNAQNFNVGTYNVRNDNSSDVGNMWKD-------RFPYIAKLI 52 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + D D QE + + R N S N Sbjct: 53 QYHDFDFFGTQEALPNQLKDMKIALPGYDYYGEG-RDGNRQGEHSAIFYKIDKYRLLSNG 111 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP 179 + P + +K + NR + ++ +GK +V H + + Sbjct: 112 DFWLSATPDVPSKSWDAPCCNRICTWVELQDIKSGKSFFVFSAHYDY-----EKDYARNE 166 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 S L+ + + + P + GD N +N + D+ Sbjct: 167 SSKLILTKIKEIA--------GDNPVIFMGDLNGGMNSSWA-QLLNNSGVLRDTYCDVEH 217 Query: 240 EKDSRCNANKNLRN--------------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + + N + +D+ ++ +L + +I Sbjct: 218 PYANNSSYNAWGKPLEELDNLDRAIISTNEILDHIYFSKHFKTKR-----WGMLTDTYNI 272 Query: 286 KSRGKRLSDHCPISIDYDF 304 GK SDH PI ++ ++ Sbjct: 273 ---GKFPSDHFPILVNAEW 288 >gi|163754356|ref|ZP_02161478.1| hypothetical protein KAOT1_15713 [Kordia algicida OT-1] gi|161325297|gb|EDP96624.1| hypothetical protein KAOT1_15713 [Kordia algicida OT-1] Length = 348 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 41/351 (11%), Positives = 88/351 (25%), Gaps = 57/351 (16%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVR------LVSWNINTLSEQEGVSLWKN--------- 45 M L + FLV + AQK + + +N+ L + L + Sbjct: 1 MKNLKSLVFLAFLVVSVQAWAQKKKQYKVQTIAFYNVENLFDTINDPLKDDEKSPIMEIQ 60 Query: 46 --SVKRTTSDYTLLRQYAKNLDADI-------VFLQEMGSYNAVAKVFPKNTWCIFYSTE 96 K + L + ++ DI + + E+ + + + + Sbjct: 61 GDRSKIYKDKISKLARVISDIGYDIAKTSPAILGVAEIENRQVLEDLVNDPKLK---DAD 117 Query: 97 RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK 156 I H I + ++ + S L D R R + + ++ ++ Sbjct: 118 YGIIHFDSPDKRGIDVGLLYKQGVFQPHSFSKHPLYIYDGDKRIYTRDQLLVSGVLDDEE 177 Query: 157 IWVLDIHLKSFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215 + ++ H S ++ + L L+D + GD N Sbjct: 178 VHIIVNHWPSRRGGEARSRPKRVKAAELNKHIIDSLQD-----IDKKAKIFTMGDMNDDP 232 Query: 216 NYLGNNDDFWKTIDPN-----DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF- 269 + + D + D + D + K Sbjct: 233 FNVSMKEVLKTKEDRDEANGKDLFNPMEGMARNGNGTLAYRDGWNLFDQIIFTAPLLKKD 292 Query: 270 ------------------LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + S SDH P+ + Sbjct: 293 FTEYRYYKAGIYNKVYLSNKRGRYKGYPFRSFAGGSYTGGYSDHFPVYVHL 343 >gi|149926631|ref|ZP_01914891.1| predicted endonuclease / exonuclease / phosphatase family protein [Limnobacter sp. MED105] gi|149824560|gb|EDM83776.1| predicted endonuclease / exonuclease / phosphatase family protein [Limnobacter sp. MED105] Length = 264 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 44/298 (14%), Positives = 85/298 (28%), Gaps = 58/298 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NI+ LR+ ++AD+VFLQE+ + Sbjct: 3 LRIATYNIHKGVMGLRKPALT---------IHALREQIHAMNADLVFLQEVQGRHDRHAG 53 Query: 84 ------------------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 + S + + + H A+ + Sbjct: 54 KFEHWPEGGQHEFLAQSPSAIDDLLGHASQQYFTAYGMNAVYSHGHHGNALLSRYEIE-- 111 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 +L S R R + V+ I + H Sbjct: 112 ---WMLNQDVSDHRLEQRGLLHCCVKTPAGPIHAMVAHFGLLY-------------RSRV 155 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 +QA L + + + +P V+AGDFN LG + + + + K + +R Sbjct: 156 RQASKLIEHVGTHVPAGMPLVVAGDFNDWQRRLGP--ILQQGLKAEEVMPLDKKNRLARV 213 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + +D F + +LSDH P +D + Sbjct: 214 GSFPSRFPVLGLDRVFARG----------FKVHEATVLHGPA-WAKLSDHAPFVVDLE 260 >gi|42565714|ref|NP_566904.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] gi|53828525|gb|AAU94372.1| At3g48425 [Arabidopsis thaliana] gi|55733769|gb|AAV59281.1| At3g48425 [Arabidopsis thaliana] gi|332644894|gb|AEE78415.1| endonuclease/exonuclease/phosphatase domain-containing protein [Arabidopsis thaliana] Length = 364 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 97/337 (28%), Gaps = 87/337 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 + ++WN N+ + R +D++ ++ + D D++ +QE+ A K Sbjct: 44 KFMTWNANSF------------LLRVKNDWSQFSKFVSDFDPDVIAIQEVRMPAAGGKGK 91 Query: 85 PKNTWCI----------------FYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQS 127 PKN + S+ N+ S + + A+ K ++ Sbjct: 92 PKNHEELSDDTKVLREEKQILTRALSSPPFGNYGVWWSLADSKYAGTALLVKKCFKPRKV 151 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 Y L S R + + +L+ + + + + + Sbjct: 152 YFNLDKLASKHEPDGRVILA-----EFETFRLLNTYSPN-----NGWKDEENAFQRRRKW 201 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINY------------------------------ 217 + + +++ K S P + GD N Sbjct: 202 DKRIVEFLN--KTSDKPLIWCGDLNVSHEEIDVSHPEFFATAKLNGYVPPNKEDCGQPGF 259 Query: 218 -LGNNDDFWKTIDPNDSLIRFPKEK----------DSRCNANKNLRNKIPIDYFVMDQNA 266 F TI + + S K ++ IDYF++ + Sbjct: 260 TPSERGRFGATIKEGRLVDAYRYLHKEQEMESGFSWSGNPIGKYRGKRMRIDYFLVSEQL 319 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + G SDHCP++++ Sbjct: 320 KDRIVSCKMHGRGIELE-----GFHGSDHCPVTLELS 351 >gi|119492055|ref|XP_001263522.1| endonuclease/exonuclease/phosphatase family protein [Neosartorya fischeri NRRL 181] gi|119411682|gb|EAW21625.1| endonuclease/exonuclease/phosphatase family protein [Neosartorya fischeri NRRL 181] Length = 606 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 42/346 (12%), Positives = 85/346 (24%), Gaps = 74/346 (21%) Query: 6 VLALVFFLVPCTASVAQKV---------RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 + AL TA+ + + S+N+N L+ ++ Sbjct: 272 LTALTVTGSNTTAAAPTDLESAGTCGGVTVGSYNVNNLAPN-------------STTLPK 318 Query: 57 LRQYAKNL--DADIVFLQEMGSYNAVAK-----------------VFPKNTWCIFYSTER 97 + Q+ +VFLQE+ N F Sbjct: 319 IAQHIAQYLKSPTLVFLQEIQDDNGPTDDGVVSANKTLSTLVQSIADQGGIEYSFVDIAP 378 Query: 98 LINHSKRDSNNDIHTAIAV------------------RKKNVRVLQQSYPLLGAKDSFSR 139 + +I + + P L + + Sbjct: 379 VNKEDGGQPGGNIRVGYLYDPSVIRLRNANPGSNTDVNEVLPGAELKFNPGLIDPSNDAW 438 Query: 140 AGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKD 193 +R+ + E K + +++H S S+E P + QA+ + + Sbjct: 439 EDSRKPLAAAWETLDGKNKFFTVNVHFTSKGGGSSIEGDARPPVNGGVATRKAQAKLVAE 498 Query: 194 WITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 + + + +GDFN + L + Sbjct: 499 FTSSILAEDSSAKIIASGDFNEFAFAQPIETFLAE--SGLKDLDEVAGIAATERYTYLYD 556 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N +D+ + K + + S + SDH P Sbjct: 557 MNCQQLDHMFVSPALAK-----GAEMHHLHVNTWVSYDDQASDHDP 597 >gi|114798068|ref|YP_760636.1| exodeoxyribonuclease III [Hyphomonas neptunium ATCC 15444] gi|114738242|gb|ABI76367.1| exodeoxyribonuclease III [Hyphomonas neptunium ATCC 15444] Length = 258 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 81/304 (26%), Gaps = 71/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + Q +++AD+V LQE+ Sbjct: 1 MRIATWNVN----------------SMKARLQTVLQVLTDINADVVCLQELKCETDA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y + + + +A+ K + R Sbjct: 42 -------FPYLEIEELGWNCAVHGQKSYNGVALLSKFPLQDVTR-----EMSTLKDDQAR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ K + V ++L + + Y + L+D ++ Sbjct: 90 YIEATVLT--DKPVRVGGLYLPNGNPAPGPKYDYK------LEWVAALEDHARSLLKAEE 141 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 PFV+ GD+N L W+ + + L + D R + Sbjct: 142 PFVLCGDYNAIPAPEDCWDDTVWNTDALGLPETRAAWRQLK-HLGLTDAFEVCDGRAHQY 200 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ + L + SDH P+ Sbjct: 201 TFWDYQGGAFQKDHGIRIDHILACPRMTDRLTA-------IEIYRKARAMDKPSDHVPMI 253 Query: 300 IDYD 303 ++ Sbjct: 254 AIFE 257 >gi|77919973|ref|YP_357788.1| exonuclease III [Pelobacter carbinolicus DSM 2380] gi|77546056|gb|ABA89618.1| Exodeoxyribonuclease III [Pelobacter carbinolicus DSM 2380] Length = 276 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 83/312 (26%), Gaps = 74/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+N+N + LR N +I+ +QE +A Sbjct: 1 MKIVSFNVNG----------------IRARLHQLRAVIDNHSPEIIGVQETKVTDA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + H +A+ + V G A R Sbjct: 41 ------DFPVDAIRELGYHVEYHGQKSHYGVALLSRQAPVQVVK----GLPGDAQDAQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +G+ +WV + F + + + L D++ + Sbjct: 91 LIGAAYETEHGEPLWVFNA-----YFPQGESRQHPTKYPGKERFYRELGDFLESRFSPEA 145 Query: 204 PFVIAGDFNR---------------------KINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N K ++L D+ + + + F + + Sbjct: 146 DLIVMGDANVAFRDEDIGIGQDNAKRWLRTGKCSFLPEERDWLRRLFDWGLVDTFRQSRS 205 Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + ID + Q + D ++ Sbjct: 206 DAAELFSWFDYRSRGFEKDPRRGLRIDLILATQVLSRRCSGSGI-------DYGIRGMEK 258 Query: 292 LSDHCPISIDYD 303 SDHCPI + D Sbjct: 259 PSDHCPIWAEVD 270 >gi|289768186|ref|ZP_06527564.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|289698385|gb|EFD65814.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 293 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 41/315 (13%), Positives = 90/315 (28%), Gaps = 65/315 (20%) Query: 8 ALVFFLVPCTASVAQ------KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 AL+ V ++A +R+ ++NI+ + +GV D Sbjct: 16 ALLTLAVTAQPALAADRGHSVPLRIATYNIHAGAGSDGVF-----------DLDRQAAAL 64 Query: 62 KNLDADIVFLQEMGSYNAVA--------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 + LDAD++ LQE+ + ++ + + ++ ++ + Sbjct: 65 RALDADVIGLQEVDVHWGARSQGLDLAGELARRLGMRVSFAPIYSLDPVTAGEPRREY-G 123 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA---VELLVEINGKKIWVLDIHLKSFCFL 170 +AV + ++ + A E+ +++ G + V HL Sbjct: 124 VAVLSRFPVRSATNHEITRLSTQDENPLPAPAPGFGEVTLKVRGVPVQVFVTHL------ 177 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTI 228 Y ++ Q + + +++ + GDFN + WK + Sbjct: 178 -----DYRADPAVRRAQVADTRRIMARERAELPGAHQFLLGDFNAEPA-APELAPLWKEL 231 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + IDY ++ Sbjct: 232 SDAGAGTPATYPAQAPVK---------RIDYVTAGKDVRIRRTAV-------------PE 269 Query: 289 GKRLSDHCPISIDYD 303 SDH P+ D Sbjct: 270 EPAASDHRPVVADVS 284 >gi|493974|pdb|1DNK|A Chain A, The X-Ray Structure Of The Dnase I-D(Ggtatacc)2 Complex At 2.3 Angstroms Resolution gi|494766|pdb|2DNJ|A Chain A, Dnase I-Induced Dna Conformation. 2 Angstroms Structure Of A Dnase I-Octamer Complex gi|82407663|pdb|2A3Z|B Chain B, Ternary Complex Of The Wh2 Domain Of Wasp With Actin-Dnase I gi|82407666|pdb|2A40|B Chain B, Ternary Complex Of The Wh2 Domain Of Wave With Actin-Dnase I gi|82407669|pdb|2A40|E Chain E, Ternary Complex Of The Wh2 Domain Of Wave With Actin-Dnase I gi|82407672|pdb|2A41|B Chain B, Ternary Complex Of The Wh2 Domain Of Wip With Actin-Dnase I gi|82407675|pdb|2A42|B Chain B, Actin-Dnase I Complex gi|116666965|pdb|2D1K|B Chain B, Ternary Complex Of The Wh2 Domain Of Mim With Actin-Dnase I gi|157836798|pdb|3DNI|A Chain A, Crystallographic Refinement And Structure Of Dnase I At 2 Angstroms Resolution gi|170785263|pdb|3CJC|D Chain D, Actin Dimer Cross-Linked By V. Cholerae Martx Toxin And Complexed With Dnase I And Gelsolin-Segment 1 gi|240684|gb|AAB20621.1| deoxyribonuclease I, DNase I [cattle, pancreas, Peptide, 260 aa] gi|248467|gb|AAB22021.1| deoxyribonuclease A [cattle, pancreas, Peptide, 260 aa] Length = 260 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 91/285 (31%), Gaps = 30/285 (10%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-- 81 +++ ++NI T E + + + + + DIV +QE+ + VA Sbjct: 1 LKIAAFNIRTFGET---------KMSNATLASYIVRIVRRY--DIVLIQEVRDSHLVAVG 49 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K+ + +++ ++ R V VL G + + + Sbjct: 50 KLLDYLNQDDPNTYHYVVSEPLGRNSYKERYLFLFRPNKVSVLDTYQYDDGCESCGNDSF 109 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R + + K+ I D++ S L Q +W + Sbjct: 110 SREPAVVKFSSHSTKVKEFAIVALHSAPSDAVAEINSLYDVYLDVQQKWHLN-------- 161 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 ++ GDFN +Y+ ++ + + + + + N D V Sbjct: 162 --DVMLMGDFNADCSYVTSSQWSSIRLRTSSTFQWLIPDSADTTATSTNCAY----DRIV 215 Query: 262 MDQNAYKF-LIQESFSEILYNEDDIKSR--GKRLSDHCPISIDYD 303 + + + ++ S + + S +SDH P+ + Sbjct: 216 VAGSLLQSSVVPGSAAPFDFQAAYGLSNEMALAISDHYPVEVTLT 260 >gi|75759849|ref|ZP_00739924.1| Exodeoxyribonuclease III [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228902244|ref|ZP_04066404.1| Exodeoxyribonuclease [Bacillus thuringiensis IBL 4222] gi|228966664|ref|ZP_04127710.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar sotto str. T04001] gi|74492665|gb|EAO55806.1| Exodeoxyribonuclease III [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228793040|gb|EEM40596.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar sotto str. T04001] gi|228857359|gb|EEN01859.1| Exodeoxyribonuclease [Bacillus thuringiensis IBL 4222] Length = 252 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 84/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + +Y + +ADI LQE+ + + Sbjct: 1 MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQSGQIDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + ++ A+ K + + D R Sbjct: 47 NLEGYYTYW-----------NYAVKKGYSGTAIFTKKEPLSVTYGLEIEEHDQEGRL--- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +++ ++ + + + L + Sbjct: 93 ------ITLEFEDFYMITLYTPNSKRGLERLDYRMKWEDDFRSYIKRL--------DEKK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + I + + + A Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTCILEEGFIDTYRYLYSDQEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV+ + + + + + SDHCP+ Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEV-----------MGSDHCPVE 247 Query: 300 IDYDF 304 + +F Sbjct: 248 LHINF 252 >gi|229544130|ref|ZP_04433189.1| exodeoxyribonuclease III [Bacillus coagulans 36D1] gi|229325269|gb|EEN90945.1| exodeoxyribonuclease III [Bacillus coagulans 36D1] Length = 251 Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 81/305 (26%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VSWN+N L + DADI +QE A Sbjct: 1 MKFVSWNVNGLRACVKKGF---------------LAFFAETDADIFCVQETK-LQAGQIA 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ + ++ AV K + + G + + R Sbjct: 45 LDLDGYYQYWN----------YAERKGYSGTAVFTKKEPLSVR----YGVGEDRTEPEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + ++++++ + + + L + Sbjct: 91 I-----LTLEYEDFYLVNVYTPNSQRDLARLGYRLEWEDRMRAYLTEL--------DKKK 137 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F R A Sbjct: 138 PVIVCGDMNVAHQEIDLKNAKNNVGNSGFTAEERGKMTGLLNSGFIDSFRYFYPEREGAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ + L D SDHCP+ Sbjct: 198 TWWSYMNKVRERNIGWRIDYFLVSKRLAGRLK-----------DAGMYPEIMGSDHCPVF 246 Query: 300 IDYDF 304 ++ +F Sbjct: 247 LETNF 251 >gi|50084486|ref|YP_045996.1| putative extracellular nuclease [Acinetobacter sp. ADP1] gi|49530462|emb|CAG68174.1| putative extracellular nuclease [Acinetobacter sp. ADP1] Length = 807 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 89/328 (27%), Gaps = 54/328 (16%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY----TLLRQYAKNLDADIVFLQEMGS 76 Q +R+ ++N+ + T +++ + K ++AD+ L E+ + Sbjct: 461 GQNIRVAAFNVLNYDNGAEKGFPTDRGATTATEFSRQHQKIVTALKAINADVYGLMEIAN 520 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K + I R ++ I I K V+ + + Sbjct: 521 NGYDEKSAIAYLTKSLGPDWKYITPPNMNRLGSDVIAVGILYNAKRVKPVNAAVVFDDQS 580 Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPS--------CSLL 184 NR + + GK V+ HLKS + Sbjct: 581 -----QKNRVTMAQTFQPIHGGKFFTVIPNHLKSKGSCPEDTASTDADQLDGQGCWNPTR 635 Query: 185 SQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 + + L W + + GD N D N ++ ++ Sbjct: 636 VKAVEQLIQWAAKNPTRVQQPNILFLGDMN----SYAKEDPILAFEKANYKVLLNDEKIG 691 Query: 243 SRCNANKN----------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG--- 289 A ID+ + D N Y+F+ + I +E Sbjct: 692 QGKQAYSYVFGVSSNALGYGGAGNIDHAIADSNLYRFVKRAFVWHINADEPTALDYNEEY 751 Query: 290 --------------KRLSDHCPISIDYD 303 R SDH P+ +D D Sbjct: 752 KTDEQKTLFYADDAYRSSDHDPVIVDLD 779 >gi|23013323|ref|ZP_00053232.1| COG3568: Metal-dependent hydrolase [Magnetospirillum magnetotacticum MS-1] Length = 330 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 33/333 (9%), Positives = 107/333 (32%), Gaps = 61/333 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--- 79 +R+ ++N+ L E+ + ++R + L ADI+ LQE+ ++ A Sbjct: 3 PLRIATFNLENLDERPVGGIDF------EDRLAVMRPQFQRLRADILCLQEVNTHAATKS 56 Query: 80 -------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP--- 129 + ++ + + R+ + ++ + + + + + Sbjct: 57 GPRLFTALDRLLAGTQYEGW---PRVHSLNRGGVHPADKHNLVIVSRLPIRSHRQVWHDL 113 Query: 130 -----------LLGAKDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTY 177 ++ + +R + +E+ G + + V+D+HL++ + Sbjct: 114 VPPCAYRPVRADPPPAEAQAVEWDRPILLAELELPGGRALHVIDVHLRAPRAVWLAGQKE 173 Query: 178 S---------------PSCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGN 220 + + Q+ ++ + + ++ V+ GDFN + G Sbjct: 174 RFGRWLSVGGWAEGYFLAGVKQAGQSLEVRLLVEEIFDADADALVVVCGDFNAGEHEAGM 233 Query: 221 N-------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273 D + + +++ + + + +D+ ++ + + + Sbjct: 234 RIIKGDDEDTGNGHLAMRMLVPLERSLPEAQRYSVIHHGRPVMLDHILVSRPLLGWYLGA 293 Query: 274 SFSEILYNEDDIKSRGKRL---SDHCPISIDYD 303 ++ + S H P+ ++ Sbjct: 294 EIHNETLGDELVSPALVLAPPQSYHAPVVAEFS 326 >gi|293602541|ref|ZP_06684987.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292819303|gb|EFF78338.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 288 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 87/324 (26%), Gaps = 85/324 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+VS+NI+ S LR L D+VFLQE+ N + Sbjct: 4 IRVVSYNIH----------KGRSALGRRDSLNELRLGLYGLRPDLVFLQEVQGRNEQKSL 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + + A+ + + ++ + S R R Sbjct: 54 LDAQHESLAAALRLDVAYGRNAIRHATDHGNALLSRFPILDHENVDI-----SDHRLEQR 108 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E++ + + +HL F ++Q L + I Sbjct: 109 GLLHARIEVDERPVHCFVVHLGLFAGS-------------RTRQVLALTERIRCMVPDGE 155 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-------------------- 243 P +IAGDFN + L F + + + P+ Sbjct: 156 PILIAGDFNDWNDRLAP--LFVQQLGLYEVFSHAPRSHGGELPRLRDSVKRLSNALRGLP 213 Query: 244 ------------------------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 + +D + S + Sbjct: 214 NGGLSVLERTNQLGMEGSAGLLQPPPRTFPAVFPWFRLDRIY-----QRGFAVRSARVLR 268 Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303 RLSDH P+ + + Sbjct: 269 ------GREWARLSDHSPLLAELE 286 >gi|116493341|ref|YP_805076.1| exonuclease III [Pediococcus pentosaceus ATCC 25745] gi|116103491|gb|ABJ68634.1| Exonuclease III [Pediococcus pentosaceus ATCC 25745] Length = 251 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 77/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L K LDADI +QE ++ Sbjct: 1 MKLISWNVNGLRAAVKHGF---------------LDVFKELDADIFCIQETKLQEGQIEL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + ++ A+ K + + + D R Sbjct: 46 ELPHYYQYW-----------NYAEKKGYSGTAIFTKKKPLAVRYGLGIEEHDQEGRI--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +K +V+ + + L Sbjct: 92 ------ITLEFEKFYVITCYTPNSQPKLKRLEYRMAWDDAFRAYIDQLNQH--------K 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + + + S+ Sbjct: 138 PVIFCGDLNVAHQEIDLKNDKTNHKNAGFTDEERNKFTQLLNSGFTDTYRYFYPSKEGVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV + + L ++ SDHCP+ Sbjct: 198 SWWSYRFNARANNAGWRIDYFVSSKALDQKLTDAQIHTEIF-----------GSDHCPVE 246 Query: 300 IDYD 303 +D D Sbjct: 247 LDLD 250 >gi|255691864|ref|ZP_05415539.1| transmembrane endonuclease/exonuclease/phosphatase family protein [Bacteroides finegoldii DSM 17565] gi|260622589|gb|EEX45460.1| transmembrane endonuclease/exonuclease/phosphatase family protein [Bacteroides finegoldii DSM 17565] Length = 378 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 93/331 (28%), Gaps = 81/331 (24%) Query: 10 VFFLVPCTASVAQK-----------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 P + ++ + + ++N++ + + K + Sbjct: 85 CVLQFPLFSPASEPIAKLGTYTPGILTVATYNVDAFNHEYMGYSCKG-----------IA 133 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 +NL ADI+ LQE+ + F ++ C +S + +AV Sbjct: 134 TQMQNLQADILCLQEV----GINSSFNIDSVCAAFSNWPY-QYVPSAPEGKELLQLAVFS 188 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + Q +K+ + +EI G+ I + + HL++ + Sbjct: 189 RYPIREQSLITYPDSKNCS--------LWCDIEIPGRTIRLFNNHLQTTEVTRNKRELEK 240 Query: 179 P----------------------SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216 + + QA LK I +S P ++ GDFN + Sbjct: 241 ELYKEDTQKAERAALTLIDGLHENFRKRAGQADVLKQLI---ADSPHPTLVCGDFNSLPS 297 Query: 217 YLGNN-------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269 + D N F K ++ + IDY + Sbjct: 298 SYVYHTIKGDKKGDKKGNKKGNKLQDGFQTSGHGYMYTFKFFKHLLRIDYVLHSPEL--- 354 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 D S SDH P+ + Sbjct: 355 -----------KSTDYFSPDWSYSDHNPVVM 374 >gi|121716960|ref|XP_001275963.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus clavatus NRRL 1] gi|119404120|gb|EAW14537.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus clavatus NRRL 1] Length = 344 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 45/316 (14%), Positives = 86/316 (27%), Gaps = 27/316 (8%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 LA L + +R+++ NI + + R S LR ++ DA Sbjct: 34 LAASKLLSMMKTTAELPLRILTHNIRY-ATKSPFKGELRWDDRKQSLLNELRFNTRHQDA 92 Query: 67 DIVFLQEMGSYNAVAKVFP--------------KNTWCIFYSTERLINHSKRDSNNDIHT 112 + LQE+ V + W + + S Sbjct: 93 -FICLQEVLHNQLVDVLSGLNQQSPPSSNPTPTGQQWTYIGVGRDDGHEAGEYSAILYKP 151 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 ++ K V P +K + A R + + + VL ++ D Sbjct: 152 SVWQLKHWDSVWLSETPDKPSK-GWDAASIRILTIGVFTHHETRHTVLAMNTHL---DDQ 207 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 + + ++ Q+ + + +S+ + GDFN + D Sbjct: 208 GSRSRYEAAKIILQKMDEYRG--GEFSDSIAGVFLTGDFNSQETQEAYGVLTGAESSLAD 265 Query: 233 SLIRFPKE-KDSRCNANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + IDY ++ K Q + + Sbjct: 266 TAKVLEPALHYGDHFTWTGFGYEGQDPTRIDYILLGPGKQKEEEQSWRVDGYAVLANRFD 325 Query: 288 RGKRLSDHCPISIDYD 303 G LSDH + +D Sbjct: 326 SGVFLSDHRAVVVDVT 341 >gi|319788428|ref|YP_004147903.1| exodeoxyribonuclease III [Pseudoxanthomonas suwonensis 11-1] gi|317466940|gb|ADV28672.1| exodeoxyribonuclease III [Pseudoxanthomonas suwonensis 11-1] Length = 256 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 86/304 (28%), Gaps = 75/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N+L+ L Q+ + DIV LQE Sbjct: 1 MKVASWNVNSLN----------------VRMPHLEQWLRAFAPDIVGLQET--------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ST + + S + +A+ + +R Sbjct: 36 -KLEDHKFPDSTLAALGYRSVFSGQKTYNGVAILSREAPRDVLV------GVPGFEHEHR 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 RA+ + + V+++++ + + + + + ++ W+ Q+ Sbjct: 89 RAISATI----GDLRVVNLYVVNGQDVGTDKYELKLA------WLAAVRTWLEQEAREHP 138 Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247 V+ GDFN + +D + + + D Sbjct: 139 RLVVLGDFNIAPDERDVHDPAVWNETHILTSAAERAALRDLLALGLHDGYRLLHDEG-GV 197 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ++ ID ++ + ++ D +R SDH P Sbjct: 198 FSWWDYRMAAFRRNLGLRIDLTLVSEALRGQVVAAGI-------DREPRTWERPSDHAPA 250 Query: 299 SIDY 302 I+ Sbjct: 251 WIEL 254 >gi|169633174|ref|YP_001706910.1| putative extracellular nuclease [Acinetobacter baumannii SDF] gi|169151966|emb|CAP00827.1| putative extracellular nuclease [Acinetobacter baumannii] Length = 812 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 47/325 (14%), Positives = 97/325 (29%), Gaps = 50/325 (15%) Query: 21 AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSY 77 A +R+ S+N+ N + G + + + D + K++DAD+ L E+ + Sbjct: 461 ANHIRVASFNVLNYDNGATGFPTERGANTQAEFDKQHRKIVSALKSIDADVYGLMEIANN 520 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + R + I AI K V+ L ++ L + Sbjct: 521 GYGPNSAIAHLTSALGPDWKYVIPENLDRLGTDVIAVAIIYNSKRVKPLNKAVVLDLGE- 579 Query: 136 SFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPS--------CSLLS 185 NR + + K V+ HLKS N+ Sbjct: 580 -----KNRTTLAQTFQAIRGNKTFTVIPNHLKSKGCSGVDANSSDADQNDGQGCWNPTRV 634 Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + + W+ + ++ GD N ++ + L + + Sbjct: 635 KAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAPI--LAFEKANYKVLLNDTKVGQGA 692 Query: 244 RCNANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289 + + +D+ + D + Y +++ I +E + Sbjct: 693 QAYSYVFGVASDANGNGGAGNLDHAIADADLYPKVVRTFAWHINADEPTVLDYNEEYKTD 752 Query: 290 -----------KRLSDHCPISIDYD 303 R SDH P+ +D D Sbjct: 753 EQKALFYGEDAYRSSDHDPVIVDLD 777 >gi|312602724|ref|YP_004022569.1| endonuclease/Exonuclease/phosphatase family protein [Burkholderia rhizoxinica HKI 454] gi|312170038|emb|CBW77050.1| Endonuclease/Exonuclease/phosphatase family protein [Burkholderia rhizoxinica HKI 454] Length = 273 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 45/280 (16%), Positives = 83/280 (29%), Gaps = 55/280 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++R+ ++NI+ + + LDADI+ LQE+ A Sbjct: 8 ELRIATYNIHGAGGR-----------WRQRSTQRIAGVVAELDADIIALQEVPLNGASN- 55 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 P + ++T AV + ++ L SF+R Sbjct: 56 -APGVLDDLQHATGMEAVAGPTLQTERGDYGNAVLSRLPIRAARTLDL-----SFTRREP 109 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R A++ +E + V+ HL S S Q + L + S Sbjct: 110 RGALDADIEYADGVLRVVATHLGL-------------SAIERSAQVRTL---LAAFDSSA 153 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 +P ++ GD N + F + F + R + +D + Sbjct: 154 LPVILLGDIN---------EWFVHGRALRALVGHFRRAPAPRTFPARWPILS--LDRIWV 202 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++LI + + SDH P+ Sbjct: 203 HPG--EWLIDVQVH--------RSALARVASDHLPLIARI 232 >gi|134098128|ref|YP_001103789.1| hypothetical protein SACE_1542 [Saccharopolyspora erythraea NRRL 2338] gi|133910751|emb|CAM00864.1| hypothetical protein SACE_1542 [Saccharopolyspora erythraea NRRL 2338] Length = 305 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 30/292 (10%), Positives = 76/292 (26%), Gaps = 34/292 (11%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + +++ ++S+NI S ++ +L + ++ +QE Sbjct: 40 PAQGERLHVMSFNIRY-----DSKAVPPSPDAWSTRRPILAELLNAESPTLLGVQEALYR 94 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + R + T P + S+ Sbjct: 95 QVKQVHADIPAHYDWIGLGREGGGRGEFMSIYYDTRRVEPLDYDHFWLSDTPNVIGSASW 154 Query: 138 SRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R + G++ ++ H S + + A ++D I Sbjct: 155 GNTVVRMVTWVRFRDLRTGREFTHVNTHFDH------------QSENSRQRSAALVRDRI 202 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 ++ +P ++ GDFN + + + + + Sbjct: 203 AGF-DAGLPVLLTGDFNTRAGDSESYRILTSGGLADGWETAAERLTPAWGTFGGYEEPVE 261 Query: 256 ---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI--SIDY 302 ID+ + + + + + G SDH P+ ++ Sbjct: 262 GGDRIDWLLANDR---------VRVLKAAINPFRKDGWFPSDHLPVHALVEL 304 >gi|66047531|ref|YP_237372.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae B728a] gi|63258238|gb|AAY39334.1| Endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae B728a] Length = 380 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 46/342 (13%), Positives = 93/342 (27%), Gaps = 75/342 (21%) Query: 11 FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53 C +V Q +++++WNI L+ + + + D Sbjct: 52 LLTASCNPAVEAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYD 111 Query: 54 YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99 + + ++ DIV LQ + VA ++P +T ++ E + Sbjct: 112 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYEDQLALIKERVADLYPCSTQAFYWKAEFVP 171 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKI 157 N S R + P+ A + + A+ + +G K+ Sbjct: 172 NPHIWGSVGRKLVT-LSRFHIDSAERLQLPVPDANIISRQFQPKDALLVSYLPLRDGGKL 230 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 V++ L T + +Q + + + + P++I GDFN Sbjct: 231 AVINTSLT----------TARHAGDTAQKQVAATETQLDKLESGGTPWLIGGDFNLLPLG 280 Query: 218 LGNNDDFWKTIDPNDSLIR-------------FPKEKDSRCNANKNLRNKIPI------- 257 + + R + N I Sbjct: 281 QYQRLPEQQRLGYAADSELHQLWDKYPMIPNNAESSGIDRSKWLTHFPNDSRINGPDRTV 340 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 DY + + S + +SDH P+ Sbjct: 341 DYLFYSPSLKR----VSARV-------RRDDTLLISDHLPVI 371 >gi|330953940|gb|EGH54200.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae Cit 7] Length = 261 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 40/295 (13%), Positives = 86/295 (29%), Gaps = 51/295 (17%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 S + + +++ N++ LR+ + + ADIVFLQE+ Sbjct: 11 ATPVSASVSLNVLTMNMHMGFGIFNRRF----------ILPELREAVRTVSADIVFLQEV 60 Query: 75 --GSYNAVAKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + +V T + S + + D A+ K + ++ Sbjct: 61 HGEHQSHARRVKDWPTISQYEFLADSMWSDFAYGRNAVYPDGDHGNALLSKYPIIQHENL 120 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + S R + ++E+ V + + S QQ Sbjct: 121 DI-----SIHGTEQRGLLHCILEVPHAG-RVHAVCVHLGLR-----------ESHRRQQL 163 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + L + + + P ++AGDFN ++ + F + + + Sbjct: 164 KLLNELMAR-IPEGEPVIVAGDFNDWRQRAD------ASLQGSGLHEVFVERFGAPAKSF 216 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +D + S LSDH P++++ Sbjct: 217 PARWPLLRLDRIYVRNATSHRPKVLS-----------SRPWSHLSDHAPLAVELT 260 >gi|296103284|ref|YP_003613430.1| endonuclease/exonuclease/phosphatase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057743|gb|ADF62481.1| endonuclease/exonuclease/phosphatase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 253 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 74/286 (25%), Gaps = 49/286 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++++ NI+ LR + + ADIV LQE+ + V Sbjct: 9 SLKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P F + +++ + H AV + S Sbjct: 59 MHFENWPDTPHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + R + + V + + Q Q L +W Sbjct: 114 VGESEKRGLLYCRIAPPDLDFPVHVGCVHLGLR-----------EAHRQAQLQMLAEWTN 162 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 P VIAGDFN + ++ F + + Sbjct: 163 A-LPEGEPVVIAGDFNDWRQRANHPLKVEAGLEE-----IFTRAHGRPARTFPVRFPLLR 216 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + + LSDH P+S + Sbjct: 217 LDRIYVKNAHASS-----------PTALALLNWRHLSDHAPLSAEI 251 >gi|198282497|ref|YP_002218818.1| exodeoxyribonuclease III Xth [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667378|ref|YP_002424687.1| exodeoxyribonuclease III [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247018|gb|ACH82611.1| exodeoxyribonuclease III Xth [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519591|gb|ACK80177.1| exodeoxyribonuclease III [Acidithiobacillus ferrooxidans ATCC 23270] Length = 257 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 81/303 (26%), Gaps = 72/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + ++ + D++ LQE +A Sbjct: 1 MKIATWNVNSL----------------KVRLPQVLEWLGSEQPDVLCLQETKLADA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + + D +R Sbjct: 41 ------RFPVAELADAGYRALYHGQPTYNGVAILSRTSPSDVR-CDWPDGGDGQARLCA- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V+++++ + LDS + Y Q + L+ I + + Sbjct: 93 --------ASFGDLRVVNVYVPNGQALDSDKYPYK------LQWLERLRGLIAGELQGWP 138 Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GDFN + D L ++ A Sbjct: 139 QLLLVGDFNIAPDTRDVYDAAEWGEGILCSAPERAALGALLELGLHDSYRKMHPDARAWS 198 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID + + D +R SDH P+ I Sbjct: 199 WWDYRAAAFRRNQGLRIDLILASSPVLSRTREVVI-------DRAARAAERPSDHAPVCI 251 Query: 301 DYD 303 + Sbjct: 252 TLE 254 >gi|220909952|ref|YP_002485263.1| exodeoxyribonuclease III Xth [Cyanothece sp. PCC 7425] gi|219866563|gb|ACL46902.1| exodeoxyribonuclease III Xth [Cyanothece sp. PCC 7425] Length = 268 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 94/309 (30%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N + + ++ + D++ LQE ++ Sbjct: 1 MKIATWNVN----------------SIRTRLVQVVEWLQANPIDVLCLQETKVIDS---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + + + +A+ ++ +S DS Sbjct: 41 ------DFPRSPFLDLGYQVHCYGQKSYNGVAILSRSEPDQVRSGFATVLADS---PQVE 91 Query: 144 RAVEL-----LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ- 197 A+E ++ + V+++++ + + S + Y + L+D++ Sbjct: 92 AALEFDQQKRVISAVWGNLRVVNLYVPNGSAIGSEKYVYKLA------WLDLLRDYLKTL 145 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKD 242 + ++ VI GDFN + +D + I F K Sbjct: 146 QAQAPQDMVICGDFNIALEDRDIHDPQGRETQVMATDTERQALQAILDLGFADGFRKFTA 205 Query: 243 SRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID+ ++Q+ Y + + D + S Sbjct: 206 EGGH-FSWWDYRAGSFRRDRGWRIDHLYLNQSLYAKAVACTI-------DKTPRHNPQPS 257 Query: 294 DHCPISIDY 302 DH P+ ++ Sbjct: 258 DHTPVILEL 266 >gi|168704312|ref|ZP_02736589.1| endonuclease/exonuclease/phosphatase family protein [Gemmata obscuriglobus UQM 2246] Length = 295 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 90/292 (30%), Gaps = 44/292 (15%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 V + S A + VS+NI G L S + + + + + D VFL E Sbjct: 42 VAASRSPAGEATFVSYNIAKGFAHRGG-LKFESREFVLAKLRRMAEVIRAEQPDAVFLSE 100 Query: 74 MGSYNA---VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 + A V +V C N++ + A+ + + L Sbjct: 101 ALTELAPCNVDQVEYLARECGLPHVAAGENYNVGLPFARVAGGNAILSRTPLTPVANIDL 160 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G K + NRRA+ + E G+ + + +H SF QAQ Sbjct: 161 AGRKPFWVTGNNRRALFVSAEFGGRPVLMAALHNDSF------------DMRNNLTQAQQ 208 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 L D++ P ++AGDFN + K I + + Sbjct: 209 LLDFV-----GDRPAILAGDFNNRPENASI-----KLIRDTGKFCGAFDGPPTFFEGTR- 257 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +DY ++ L ++ SDH P+ + Sbjct: 258 ---AERLDYIFA-PAGWELLESRVVADDT-------------SDHRPLVCRF 292 >gi|145324102|ref|NP_001077640.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] gi|215275244|sp|A8MS41|CCR4D_ARATH RecName: Full=Carbon catabolite repressor protein 4 homolog 4; Short=CCR4 homolog 4 gi|332193244|gb|AEE31365.1| carbon catabolite repressor protein 4-like 4 [Arabidopsis thaliana] Length = 417 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 44/324 (13%), Positives = 87/324 (26%), Gaps = 46/324 (14%) Query: 24 VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 RLVS+NI + + + + + + KNL AD LQE+ Y++ Sbjct: 92 FRLVSYNILAQVYVKSALLPHSPPACLKWKARSHAILSVLKNLQADFFCLQEVDEYDSFY 151 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +R + + A R+ DS S + Sbjct: 152 RNNMDSLGYSGIYIQRTGQRKRDGCAIFYKPSCAELVTKERIEYNDLVDSIKADSVSCSE 211 Query: 142 NRR----------------------------AVELLVEINGKKIWVLDIHLKSFCFLDSL 173 + + IN ++ + + L Sbjct: 212 QKIETSNEGKDSRKDSRDLNDPLVRLKRDCVGIMAAFRINKPFQHIVIVANTHLYWDPEL 271 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------LGNNDD 223 + L + K I+ + E ++AGDFN + Sbjct: 272 ADVKLAQAKYLLSRLAQFKTLISDEFECTPSLLLAGDFNSIPGDMVYSYLVSGNAKPTET 331 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY--- 280 + P + + N +DY + + F+ S ++ Sbjct: 332 IEEEEAPVPLSSVYEVTRGEPKFTNCTPGFTNTLDYIFISPS--DFIKPVSILQLPEPDS 389 Query: 281 -NEDDIKSRGKRLSDHCPISIDYD 303 + SDH PI +++ Sbjct: 390 PDVVGFLPNHHHPSDHLPIGAEFE 413 >gi|29346594|ref|NP_810097.1| hypothetical protein BT_1184 [Bacteroides thetaiotaomicron VPI-5482] gi|253568042|ref|ZP_04845453.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|29338490|gb|AAO76291.1| putative transmembrane endonuclease/exonuclease [Bacteroides thetaiotaomicron VPI-5482] gi|251842115|gb|EES70195.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 370 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 90/304 (29%), Gaps = 68/304 (22%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + + + ++N+N+ + + + Y K L DI QE Sbjct: 109 ATESALTIATYNVNSFNHEHTGFSC-----------KEIAAYMKELGVDIFCFQEF---- 153 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + F ++ S + + +AV + +Q + + Sbjct: 154 GINHEFGTDSLRTVLSEWPYY-YVPSSPAGESLLQLAVFSRYPIKEKQLVTYPNSNNCS- 211 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSF-------------CFLDSLENTY-------- 177 + ++ING+ I + + HL++ D+ Sbjct: 212 -------LWCDIDINGQTIRLFNNHLQTTEVSRNKRKLEKELRADDTDRAERAALTLADG 264 Query: 178 -SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + + QA+ + I+ +S P ++ GDFN + ++T+ Sbjct: 265 LHENFKKRAAQAEHINQLIS---DSPYPTLVCGDFNSLPSSY-----VYQTVKGEKMNDG 316 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 F + ++ + IDY + + D S SDH Sbjct: 317 FQTCGHGYMYTFRYFKHLLRIDYILHSSE--------------FQGVDYFSPDLEYSDHN 362 Query: 297 PISI 300 P+ + Sbjct: 363 PVVM 366 >gi|221198087|ref|ZP_03571133.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2M] gi|221204354|ref|ZP_03577371.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2] gi|221175211|gb|EEE07641.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2] gi|221182019|gb|EEE14420.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2M] Length = 285 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 84/307 (27%), Gaps = 52/307 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 +R++ WNI + +GV D A+ L D D++ +QE+ Sbjct: 1 MRVIDWNIQWGRDADGV-----------VDLRRTIAVARQLADFDVLCVQEITRGFDALP 49 Query: 75 --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 A++ + A+ + L Sbjct: 50 GRPGVGQFAELAALLPGYTVVEAIGADLPPAQPGTPRRQFGNAIATRLPVGRVLRQLLPW 109 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 D+ + + R A+++ + + V+ HL+ + + + ++A Sbjct: 110 PADADAPSMPRVALDVELLTASGPLRVVTTHLEFYS--ERQRLAQVDAIRARHREACAHA 167 Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 D + PF ++ GDFN + + + + Sbjct: 168 DRPAPAENDTGPFAATAQSRDAILCGDFNSAFDSTAYRRMLEPIDGAPAFVDAWIAQHPG 227 Query: 244 RC--------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 R + + + D+ + L + R SDH Sbjct: 228 RTPPPTAGVYDTAQWSDGPLACDFAFVTDTLLPRLARCEI-----------DGAVRASDH 276 Query: 296 CPISIDY 302 PI ++ Sbjct: 277 QPIVLEL 283 >gi|149199822|ref|ZP_01876852.1| hypothetical protein LNTAR_23729 [Lentisphaera araneosa HTCC2155] gi|149137110|gb|EDM25533.1| hypothetical protein LNTAR_23729 [Lentisphaera araneosa HTCC2155] Length = 271 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 37/281 (13%), Positives = 89/281 (31%), Gaps = 40/281 (14%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL ++N+ + + ++ Q + D++ LQE + K Sbjct: 30 LRLSTFNLAHGRGRSLSHFTLGRK-KIEANLIATAQQIQASPVDLLALQEAEAEMTWHKN 88 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + + + + AV K V +S+ +K +F + Sbjct: 89 LHQSQFLAEQAGFSQVAQGEHVRGKRYSYGTAVLSKLKIVHSESHVFPRSKLTFPKGF-- 146 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ K V+ +HL +Q Q L ++I + + Sbjct: 147 -VSAEVISHCQKHFRVISLHLDFLH------------EKTRQRQIQMLCNYIQNQAP--L 191 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 P +I GDFN + G + + ++ + + + + + +D+ ++ Sbjct: 192 PLIIMGDFNCQYRKNGVLERLAQELNL--------QVWNPQEKIVSFPKLGLRLDWILIS 243 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 Q + + SDH + + +F Sbjct: 244 QEMR--------------FNSYELWDDLASDHLAVRAELEF 270 >gi|332978781|gb|EGK15471.1| exodeoxyribonuclease III [Psychrobacter sp. 1501(2011)] Length = 271 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 81/314 (25%), Gaps = 77/314 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R VS+NIN + + +R D D++ +QE ++ Sbjct: 2 IRFVSFNINGIRAR-------------QHQLEAVRDII---DPDVMGIQETKVHDE---- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-NVRVLQQSYPLLGAKDSFSRAGN 142 + + H +A+ K +Q+ +P + Sbjct: 42 ------QFPLQDVESLGYHVEYFGQKAHYGVALVSKVKPIFVQKGFPGESEEAQKRFIHA 95 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R +GK+I VL+ F + + + L +++ Q K+ Sbjct: 96 RYIF------DGKEIDVLN-----GYFPQGESRDHETKFPMKREYYASLNEYVDQLKDEG 144 Query: 203 VPFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEK 241 +I GD N +++ + D + Sbjct: 145 RTLIIMGDMNIAPEDNDIGIGEKNAQRWLKNGKTSFLPEEREWYSALMSRDLFDTYRIHN 204 Query: 242 DSRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + ID+ + + I + Sbjct: 205 PDCNEKFSWFDYRSRGFNDDPKRGLRIDHILCTDDIKDQCIDAGI-------SYELRAME 257 Query: 291 RLSDHCPISIDYDF 304 + SDH PI + F Sbjct: 258 KPSDHAPIWASFKF 271 >gi|323967391|gb|EGB62812.1| endonuclease/Exonuclease/phosphatase [Escherichia coli M863] gi|327253576|gb|EGE65205.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli STEC_7v] Length = 253 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 44/295 (14%), Positives = 83/295 (28%), Gaps = 53/295 (17%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + ++++ NI+ LR + + ADIV LQE+ Sbjct: 2 PVQTQQFSFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVM 51 Query: 76 SYNAVAKV----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 + V + +P + F + + + + + H AV + Sbjct: 52 GAHEVHPLHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----H 106 Query: 130 LLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 S A R + + GK I V+ +HL + Q Sbjct: 107 YENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQ 153 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 L +W+ + P ++AGDFN + +D F + Sbjct: 154 LAMLAEWVNE-LPDGEPVLVAGDFNDWRQKANHPLKMQAGLDE-----IFTRAHGRPART 207 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + LSDH P+S + Sbjct: 208 FPVQFPLLRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251 >gi|156365697|ref|XP_001626780.1| predicted protein [Nematostella vectensis] gi|156213669|gb|EDO34680.1| predicted protein [Nematostella vectensis] Length = 327 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 44/296 (14%), Positives = 82/296 (27%), Gaps = 23/296 (7%) Query: 21 AQKVRLVSWNINTLSEQEGVSL-----WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 R++ WN+ + ++ L Q + DI+ L+E+ Sbjct: 41 GSPFRVMQWNVLADGLSGSSPTSNFIKCPSEALSWSTRKQRLIQGILTYEPDIICLEEVD 100 Query: 76 S-YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 Y+ + + + + + + N A+ R + K Sbjct: 101 HFYDFFKPSLDEVGYTGIFVPKE-DSPCLKFPGNSGPDGTAIFFDKQRFKLRKQQSKQLK 159 Query: 135 DSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 +S N+ A+ + + +N K ++ HLK+ L + S L Sbjct: 160 NSDGTLTNQTALFVHLFDNLNKKSLYCCGTHLKAKPAFQDLRSAQGKSV---------LA 210 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGN---NDDFWKTIDPNDSLIRFPKEKDSRCN-AN 248 + ++ GDFN + D + E D Sbjct: 211 FLKDFMENEQAEVLVCGDFNAEPTEPVYQVMEDGVHGVPLRSAYKTISRSEPDYTTWKIR 270 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 N K IDY + N D + SDH + D+ F Sbjct: 271 PNGEVKHTIDYVWHSEGLKVDGYLHVADTASMNVDRLPCMAY-PSDHISLVFDFSF 325 >gi|46581661|ref|YP_012469.1| exodeoxyribonuclease III [Desulfovibrio vulgaris str. Hildenborough] gi|46451084|gb|AAS97729.1| exodeoxyribonuclease III [Desulfovibrio vulgaris str. Hildenborough] gi|311235301|gb|ADP88155.1| exodeoxyribonuclease III [Desulfovibrio vulgaris RCH1] Length = 257 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 77/303 (25%), Gaps = 74/303 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 RLVSWN+N W + AD+V LQE K Sbjct: 4 RLVSWNVNGFRAVSSKPEW---------------NWFSTTTADVVALQE-------TKAD 41 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 P S + + ++ +AV ++ + D R R Sbjct: 42 PAQVGEEHRSPDGWHAWWLPATVKKGYSGVAVFSRHTPLDVA----YDLPDERFRGEGR- 96 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + L + +I+ + + + A+ L+ P Sbjct: 97 CLHLTFP----EFHFFNIYFPNGGMGEERLRYKMGYYEAFLEHAETLRR--------DRP 144 Query: 205 FVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 V+ GDFN +L + + F + + Sbjct: 145 IVVCGDFNTAHRPIDLARPKENETVSGFLPEERAWMDRFVAAGYVDTFRHVRGDEADRYS 204 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 K IDYF + + + SDHCP+ + Sbjct: 205 WWSYKTRARARNVGWRIDYFFVSEELRGAVRDAWIE-----------MDVMGSDHCPVGL 253 Query: 301 DYD 303 + + Sbjct: 254 ELE 256 >gi|192288715|ref|YP_001989320.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1] gi|192282464|gb|ACE98844.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1] Length = 270 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 36/306 (11%), Positives = 78/306 (25%), Gaps = 65/306 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + L +WNIN L+ ++ K DI+ LQE Sbjct: 3 LTLTTWNIN----------------SVRLRIDLVAKFLKAQRPDILCLQETKCP---DDA 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + RL + + +AV K V DS + Sbjct: 44 FPLKRFK------RLGYEHVALNGQKGYHGVAVISKLPFVTTDIRTFCDIIDSRHIS--- 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + + N + + + ++ + D + +P +K Sbjct: 95 --VSVKTDENAPPLVLHNFYVPAG--GDIPDPAVNPKFKHKLSFLDEMKACEPLHPSGDQ 150 Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N + + + + + Sbjct: 151 RHILVGDLNVAPHEHDVWSHKQLLKVVSHTPVECEKLLAVLRAGNWVDVARERIPLDQKV 210 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + ++ + +R SDH P Sbjct: 211 YTWWSYRAADWTVGDRGRRLDHIWVSEALKDRVVD-------FKVLRDARSWERPSDHVP 263 Query: 298 ISIDYD 303 +++ + Sbjct: 264 VTMTME 269 >gi|119497479|ref|XP_001265498.1| endonuclease/exonuclease/phosphatase family protein [Neosartorya fischeri NRRL 181] gi|119413660|gb|EAW23601.1| endonuclease/exonuclease/phosphatase family protein [Neosartorya fischeri NRRL 181] Length = 439 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 102/313 (32%), Gaps = 34/313 (10%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +R + L L+ +P A+ A + ++S+N+ L + + + + Sbjct: 1 MRPFHL-LLAAGIPALAATAGEFNILSFNVAGLPAILNGNEVPGDKTDNSR---QIGKKF 56 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 D++ +QE +Y+A + R + ++T + Sbjct: 57 AEYGYDVIHVQEDFNYHA-------YIYETDNHPYRTPTSGGAAIGSGLNT--LSNFQFT 107 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPS 180 ++ + + + + V ++ G + ++H + D Sbjct: 108 NFVRTKWGTCSNAEGADCLTPKGFTSMRVRVDEGVYVDFYNLHADAGSKDDD-------- 159 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFP 238 S Q L D+I ++ GD N + G+N ++T + N + Sbjct: 160 VKARSANLQQLADYIK-VNSVGNAVLVFGDTNARYTRSGDNIRVFQTQNGMVNPWVELIL 218 Query: 239 KEKDSRCNAN-------KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 K + +N + +D + L ++ + + +G Sbjct: 219 KGAEPAEGSNALICQNPSTTNDCETVDKIFYRGSRAADLKAVFWN--YESNKFLSDKGTI 276 Query: 292 LSDHCPISIDYDF 304 LSDH PI+ ++ + Sbjct: 277 LSDHNPITTNFTW 289 >gi|228940815|ref|ZP_04103375.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228973735|ref|ZP_04134313.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980291|ref|ZP_04140602.1| Exodeoxyribonuclease [Bacillus thuringiensis Bt407] gi|228779396|gb|EEM27652.1| Exodeoxyribonuclease [Bacillus thuringiensis Bt407] gi|228785981|gb|EEM33982.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228818829|gb|EEM64894.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326941450|gb|AEA17346.1| exodeoxyribonuclease III [Bacillus thuringiensis serovar chinensis CT-43] Length = 252 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + +Y + ADI LQE+ + Sbjct: 1 MKLISWNVNGLRAVIAKGGF--------------LEYLEESSADIFCLQEIKLQEGQIDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + ++ A+ K + + D R Sbjct: 47 NLEGYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRL--- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +++ ++ + + + L + Sbjct: 93 ------ITLEFEDFYMITLYTPNSKRGLERLDYRMKWEDDFRSYIKRL--------DEKK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + I + + ++ A Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTCILEEGFVDTYRYLYPNQEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV+ + + + + + SDHCP+ Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEV-----------MGSDHCPVE 247 Query: 300 IDYDF 304 + +F Sbjct: 248 LHINF 252 >gi|307565860|ref|ZP_07628321.1| endonuclease/exonuclease/phosphatase family protein [Prevotella amnii CRIS 21A-A] gi|307345484|gb|EFN90860.1| endonuclease/exonuclease/phosphatase family protein [Prevotella amnii CRIS 21A-A] Length = 315 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 42/328 (12%), Positives = 90/328 (27%), Gaps = 50/328 (15%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNS-----------VKRTTSDYTLLRQYA 61 +P + K+ +V N + + SL ++ + + + Sbjct: 2 FLPFSLFAQTKIVVVELNAENMFDVRHDSLKNDTEFLPNGMRHWTKAKYWEKINKIGKEI 61 Query: 62 KNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 + DIV L E+ + + + ++ + N S ++ Sbjct: 62 LSCGKDSVGWSVPDIVGLCEVENDTVLFDLTKRSLLRKARYEYIMTN-----SPDERGID 116 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDS 172 +A+ + K R + + EI +G + V +H S + Sbjct: 117 VALLYSPFSFKVLKADTIKVKPLKGMKPTRDILHVEGEIVSGDTLHVFLLHAPSKSGGE- 175 Query: 173 LENTYSPSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 S A L I +K + +I GDFN + I Sbjct: 176 -----LQSRPFRLHVADVLCHSIDSIRKINNNSKILIMGDFNDYASSPALRRICKHNIID 230 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY---------- 280 + + + +D+F++ N + S ++ + Sbjct: 231 ---ISEKAQGTHGAMGTYRFQGEWGSLDHFLISLNLLSNIKSCSINDAPFLLEEDMKYGG 287 Query: 281 ----NEDDIKSRGKRLSDHCPISIDYDF 304 + SDH P+ + F Sbjct: 288 VKPRRNYNGLRYNSGFSDHLPLVLRLTF 315 >gi|187729939|ref|YP_001853833.1| endonuclease/exonuclease/phosphatase [Vibrio tapetis] gi|182894498|gb|ACB99663.1| putative exported nuclease [Vibrio tapetis] Length = 287 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 96/320 (30%), Gaps = 58/320 (18%) Query: 1 MIRKYVLALVFFLVPCTASVA-----------QKVRLVSWNINTLSEQEGVSLWKNSVKR 49 M + A++ F+V ++++A +R+ S+NI + Sbjct: 1 MKLTSIAAVIGFIVLSSSTLAFDRLMDGPADTNSIRVGSYNI---------------MAS 45 Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGS------YNAVAKVFPKNTWCIFYSTERLINHSK 103 + + + ++ DI+ LQE+ + N + + + + + +N+ Sbjct: 46 RMGSTDAIVEAIRKMNVDIIGLQEVDNMTGRSGKNFSKEGSNPVSQAEYIANKLGMNYYF 105 Query: 104 R--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 ++ AV K L + L K A R A + V++ V+ Sbjct: 106 CKAIDHDGGEYGTAVLSKYDLKLNKRMELPNIKG----AEQRAACAVEVDVPNYPAPVML 161 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 + L ++Q + L+ + + +I GD N Sbjct: 162 VTTHLDFTTQ----------PLRAEQVRTLQTKFSSWQFKNALPIIVGDLNLPPQSTEYL 211 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 D D + L + IDY + + + + Sbjct: 212 DLTAWFNDTDKELK----------YTAPSWNPDRKIDYILTSNAQKWDIKEVYIPKPSDR 261 Query: 282 EDDIKSRGKRLSDHCPISID 301 +SDH P+ ++ Sbjct: 262 ATPESKPYASVSDHLPLLVE 281 >gi|171060686|ref|YP_001793035.1| endonuclease/exonuclease/phosphatase [Leptothrix cholodnii SP-6] gi|170778131|gb|ACB36270.1| Endonuclease/exonuclease/phosphatase [Leptothrix cholodnii SP-6] Length = 276 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 87/303 (28%), Gaps = 58/303 (19%) Query: 15 PCTASVAQK----VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + A K +R+ ++NI+ + + + L + LDAD+V Sbjct: 16 APPPARADKDGSRLRVATYNIH--------KGVRGMGPQKRLEIHNLGMGVQALDADLVC 67 Query: 71 LQEM--GSYNAVAKV------FPKNTWCIFYSTE-RLINHSKRDSNNDIHTAIAVRKKNV 121 LQE+ + + +PK F + E + A+ + Sbjct: 68 LQEVRLFHHGDANRFDHTHFGWPKQGQAEFLAPEGYESAYRTNAVTRGGEHGNALLSRWP 127 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + + S R R + +V+ +G + + H Sbjct: 128 LGDVGHHDV-----SDHRFEQRGLLHTMVQWHGVTVHTIVAHFGLIH------------- 169 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + +QA+ L D+I K V+AGDFN L I P + Sbjct: 170 ASRVRQAERLGDYIDAKIPRGALVVVAGDFNDWGERLDP------IIGAAGLQRAAPPDA 223 Query: 242 DSRCNANKNLRNKIPIDYFVMDQ-NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +D + R+SDH P+ + Sbjct: 224 RRGPLTFPSRMPLFALDRVYTRGLRCADTFVPRGA------------AWARMSDHLPLVV 271 Query: 301 DYD 303 + + Sbjct: 272 ELE 274 >gi|329890230|ref|ZP_08268573.1| exodeoxyribonuclease III [Brevundimonas diminuta ATCC 11568] gi|328845531|gb|EGF95095.1| exodeoxyribonuclease III [Brevundimonas diminuta ATCC 11568] Length = 261 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 84/304 (27%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + ++ + + D+ QE+ + Sbjct: 1 MRIATWNVN----------------SVNARLPTVLEWIQAANPDVACFQEIKCVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + +A+ K + D +R Sbjct: 41 ------KFPREAFEDLGYNVETHGQKSYNGVALLSKYPLSDVRRGLPGDDGDEQARY--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E L+E + I V I+L + L + + Y + Q L++ + Sbjct: 92 --LEALIEAP-RPIRVASIYLPNGNPLGTEKFAYKLA------WFQRLQNHARELLALEE 142 Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N + + ++ + + Sbjct: 143 PLALCGDYNVIPEAEDAKNPAAWAEDALFQPESREAFRALKWLGLAD-SHELGREPAGTF 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ +A ++ SDH P+ Sbjct: 202 TFWDYQAGAWQRNHGIRIDFALLSPHAADRFRA-------IETHREARDMEKPSDHVPVV 254 Query: 300 IDYD 303 +D D Sbjct: 255 VDLD 258 >gi|163853428|ref|YP_001641471.1| exodeoxyribonuclease III Xth [Methylobacterium extorquens PA1] gi|254563357|ref|YP_003070452.1| exodeoxyribonuclease III [Methylobacterium extorquens DM4] gi|163665033|gb|ABY32400.1| exodeoxyribonuclease III Xth [Methylobacterium extorquens PA1] gi|254270635|emb|CAX26639.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP endonuclease VI) [Methylobacterium extorquens DM4] Length = 269 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 29/306 (9%), Positives = 73/306 (23%), Gaps = 66/306 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + +WNIN + ++ + D++ LQE + Sbjct: 3 LTVTTWNIN----------------SVRLRIESVLRFLREAQPDVLCLQETKCP---DDL 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + + +A+ + + + D+ R Sbjct: 44 FPLKAFKG------SGYENIVFAGQKGYNGVAIISRFPLLTRDVMSFCERPDA------R 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +L G ++ D +P + L+ W ++ Sbjct: 92 HISAVLGPEAGPAAGIVLHDFYVPAGGDMPHRDLNPKFAHKLDFLSELRVWGGRRVSG-- 149 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N + + + Sbjct: 150 PAILVGDLNVAPLEHDVWSHKQLLDVVSHTPVETEALETLRGEAGWIDAARLLTPEPEKI 209 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + + +R SDH P Sbjct: 210 YTWWSYRSPNWELANKGRRLDHTWVSPDLAG-------TVRRVAVFREARGWERPSDHVP 262 Query: 298 ISIDYD 303 +++ + Sbjct: 263 VTLTLE 268 >gi|260912305|ref|ZP_05918856.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp. oral taxon 472 str. F0295] gi|260633606|gb|EEX51745.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp. oral taxon 472 str. F0295] Length = 321 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 39/315 (12%), Positives = 81/315 (25%), Gaps = 50/315 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD------- 65 LV N L + SL + + R + Q Sbjct: 12 FTLVQLNCENLFDCRHDSLKDDHEFLPEAYRHWTPSRYWKKLNRIGQEIVACGGEGKQWR 71 Query: 66 -ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 D+V L E+ + + + + ++ + N S + +A+ Sbjct: 72 LPDLVALCEVENDSVLRDLTRRSLLRTARYEYVMTN-----SPDVRGIDVALLYSPFTFA 126 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L R + V G + V +H S ++ Y + + Sbjct: 127 LVKSYALRVNPLAGMRPTRDILYANGVTAGGDTLHVFVLHAPSRAGGEANTRPYRLAVAR 186 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 A D I Q + V+ GDFN + + + ND + Sbjct: 187 RLCAA---IDSIRQGNMAAN-IVVTGDFNDYGDTP-----ALRLLSDNDLTDVSANAIGN 237 Query: 244 RC--NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY--------------NEDDIKS 287 + +D+ + + ++ + + + Sbjct: 238 NGAKGTYRYQGEWGSLDHIYVSRLLHEKGVSCRIFDAPFLLEDEEKYGGKRPWRTYQGPK 297 Query: 288 RGKRLSDHCPISIDY 302 SDH P+ + + Sbjct: 298 YLGGFSDHLPLVVTF 312 >gi|15893514|ref|NP_346863.1| exodeoxyribonuclease (exoA) [Clostridium acetobutylicum ATCC 824] gi|15023055|gb|AAK78203.1|AE007535_5 Exodeoxyribonuclease (exoA) [Clostridium acetobutylicum ATCC 824] gi|325507632|gb|ADZ19268.1| Exodeoxyribonuclease (exoA) [Clostridium acetobutylicum EA 2018] Length = 250 Score = 88.8 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 33/303 (10%), Positives = 75/303 (24%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L Y K +DAD+ LQE ++ Sbjct: 1 MKLISWNVNGLRACITKGF---------------LDYFKEVDADVFCLQETKIQEGQVEL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + ++ A+ K + G + R Sbjct: 46 ELPGYYDFW-----------NYAEKKGYSGTAIFTKKKPISYS----YGINEEKHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + + L + Sbjct: 91 -----VITLEFEDFYMVTVYTPNSKEKLARLEYRMEWEDSFRNYLKAL--------DEKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + + Sbjct: 138 PVIVCGDMNVAHTEIDLKNPKTNTKNAGFSPEERSKFTELLEAGFIDTYRYFYPDKEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + L+ + SDHCP+ Sbjct: 198 SWWSYRFKAREKNAGWRIDYFCTSERLKDKLVSADIHTEV-----------MGSDHCPVE 246 Query: 300 IDY 302 + Sbjct: 247 LVI 249 >gi|302522772|ref|ZP_07275114.1| exodeoxyribonuclease III [Streptomyces sp. SPB78] gi|318058357|ref|ZP_07977080.1| exodeoxyribonuclease III [Streptomyces sp. SA3_actG] gi|302431667|gb|EFL03483.1| exodeoxyribonuclease III [Streptomyces sp. SPB78] Length = 262 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 72/304 (23%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N T+ L + ++ D++ +QE + Sbjct: 4 MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCVQETKTTAE---- 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + +AV + S L R Sbjct: 44 ------GFPTEALREAGYESAVNATGRWNGVAVISRAGLDDVVSG-LPDQPAYDGVMEPR 96 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + + Y + + L+ + Sbjct: 97 A-----LGATCGPVRVWSVYVPNGREVGHPHYAYK------LEWLEALRAAVAGDAAGTR 145 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF + GD+N + P+ Sbjct: 146 PFAVMGDYNVAPGDEDVYDPAVFEGLTHVTPPERAALAELRATGLGDLVPRPLKYD-RPY 204 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID + D + +GK SDH P+ Sbjct: 205 TYWDYRQLAFPKNRGMRIDLVYANAAFRSAAKDAYV-------DREERKGKGASDHAPVV 257 Query: 300 IDYD 303 +D D Sbjct: 258 VDLD 261 >gi|29377212|ref|NP_816366.1| exodeoxyribonuclease [Enterococcus faecalis V583] gi|227554220|ref|ZP_03984267.1| exodeoxyribonuclease [Enterococcus faecalis HH22] gi|29344678|gb|AAO82436.1| exodeoxyribonuclease [Enterococcus faecalis V583] gi|227176667|gb|EEI57639.1| exodeoxyribonuclease [Enterococcus faecalis HH22] gi|315573773|gb|EFU85964.1| exodeoxyribonuclease III [Enterococcus faecalis TX0309B] gi|315580287|gb|EFU92478.1| exodeoxyribonuclease III [Enterococcus faecalis TX0309A] Length = 251 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 78/305 (25%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + LDAD LQE A Sbjct: 1 MKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++S +S A++VR R Sbjct: 45 LELPGYHQYWSYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------EAHDQEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ + + + + ++ + + Sbjct: 91 -----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK- 137 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F Sbjct: 138 PVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ ++ + L+ + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246 Query: 300 IDYDF 304 + DF Sbjct: 247 VVLDF 251 >gi|227823661|ref|YP_002827634.1| exodeoxyribonuclease III [Sinorhizobium fredii NGR234] gi|227342663|gb|ACP26881.1| exodeoxyribonuclease III [Sinorhizobium fredii NGR234] Length = 268 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 31/308 (10%), Positives = 73/308 (23%), Gaps = 71/308 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 + + +WNIN L+ N DI+ LQE + Sbjct: 3 LSIATWNIN----------------SVRLRMPLVEHLLVNWQPDILCLQETKCPDDQFPS 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K + + +A + Sbjct: 47 APLKKLGYKYI-----------EMHGQKGYHGVATISRLPLTELTDRRNYCGVGDARH-- 93 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++ I GK + + + ++ + D + T +P + + + E+ Sbjct: 94 ----LSVVFAIGGKTVRLHNFYVPAG--GDEPDRTINPKFGHKLDFVDEM-KLLHAEAEA 146 Query: 202 LVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + ++ GD N + D + + + Sbjct: 147 GISSILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETDGLTTVMTGGAWVDLMRQHTPPPE 206 Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ + L + + +R SDH Sbjct: 207 KLYTWWSYRAKDWAAVDRGRRLDHIWSSADLAAKL-------LRVDILREARGWERPSDH 259 Query: 296 CPISIDYD 303 P+ ++ Sbjct: 260 VPVIAHFE 267 >gi|330996654|ref|ZP_08320532.1| exodeoxyribonuclease III [Paraprevotella xylaniphila YIT 11841] gi|329572726|gb|EGG54359.1| exodeoxyribonuclease III [Paraprevotella xylaniphila YIT 11841] Length = 250 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 78/303 (25%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L ++ LDAD LQE Sbjct: 1 MKFISWNVNGLRACCEKGFKES---------------FAALDADFFCLQETKMQEG-QLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ ++ + L D R Sbjct: 45 LEFEGYRSYWNYAEKKGY----------SGTAIFSRHAPLNVTYGLGLEEHD-------R 87 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E+ +++ ++ + + L ++ Sbjct: 88 EGRVITLEMPD--FFLVTVYTPNSQDGLKRLDYRMQWEEAFRAYLLQL--------DTRK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F R Sbjct: 138 PVIVCGDLNVAHREIDLKNPKSNRKNAGFTDEEREKFGILLDSGFTDTFRFFYPDREGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ + L + ++ SDHCP+ Sbjct: 198 SWWSYRFKAREKNAGWRIDYFLVSKRLEAQLKSATIHTEIF-----------GSDHCPVE 246 Query: 300 IDY 302 +D Sbjct: 247 VDL 249 >gi|254509791|ref|ZP_05121858.1| exodeoxyribonuclease III [Rhodobacteraceae bacterium KLH11] gi|221533502|gb|EEE36490.1| exodeoxyribonuclease III [Rhodobacteraceae bacterium KLH11] Length = 259 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 81/303 (26%), Gaps = 68/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + L ++ + D+V LQE+ S + Sbjct: 1 MKIATFNING----------------IKARAEALPRWLDDAQPDVVLLQEIKSIDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ +A+ K G R Sbjct: 41 ------NFPREIFEDRGYNVEAHGQKSFNGVAILSKLQLEDVTR----GLPGDDMDEQAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V K + + ++L + + + Y + + L D + Sbjct: 91 WIEATVV--GKKAVRICGLYLPNGNPVPGPKYDYKLA------WMERLYDRARALLAAEE 142 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++AGD+N + + ++ I F + + Sbjct: 143 PALMAGDYNIIPQAEDAKRPNAWREDALFRPESRAAYRKILNLGFTEAFRARTQGPGHYS 202 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ID+F++ + D ++ SDH P+ I Sbjct: 203 FWDYQAGAWNKNDGIRIDHFLLTPQTADLMRDC-------RIDSEVRGHEKPSDHVPVWI 255 Query: 301 DYD 303 D D Sbjct: 256 DLD 258 >gi|83954036|ref|ZP_00962756.1| endonuclease/exonuclease/phosphatase family protein [Sulfitobacter sp. NAS-14.1] gi|83841073|gb|EAP80243.1| endonuclease/exonuclease/phosphatase family protein [Sulfitobacter sp. NAS-14.1] Length = 341 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 89/336 (26%), Gaps = 56/336 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSD--------YTLLRQYAKNLDADIVFLQEMG 75 +R+ ++N+ + ++ L + +DAD V + E Sbjct: 1 MRIATYNVEWFTGLFDDEDQLLLDDGWSARHNITRAQQAQALGTVFRAMDADAVMVIEAP 60 Query: 76 SYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-------- 126 + V + + ++ A+ + Sbjct: 61 DQSRKRGTVAALERFAAHFDLRTRKAVIGFANDTQQEIALLFDPDRLSATHAPGGAVGQG 120 Query: 127 ---------SYPLLGAKDSFSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENT 176 L ++ +EL + G ++ HLKS + Sbjct: 121 DAPRFDGTLDIDLDIDAREDHVVFSKPPLELDIVTREGVAFHMIGAHLKSKAPHGAKTPQ 180 Query: 177 YS-----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK----- 226 + + QA WL+ I + + P ++ GD N D F + Sbjct: 181 DALRIGIANRRKQLAQAIWLRRRIDARLDDGTPLMVLGDLNDGPGLDSFEDLFGRSSVEI 240 Query: 227 ---------TIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQ 272 +DP+ + + + + +DY ++ Q Sbjct: 241 VMGHRQDRALVDPHATRALGQRIGAMPTTSRFWIAPEKRYLQALLDYIMISPALTAHRPQ 300 Query: 273 ESFSEILYNEDDIKSRGKR-----LSDHCPISIDYD 303 L + + R SDH P++ID D Sbjct: 301 WRIWHPLDDPECWGDATLRDALITASDHFPVTIDLD 336 >gi|260466724|ref|ZP_05812910.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum WSM2075] gi|259029454|gb|EEW30744.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum WSM2075] Length = 287 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 87/310 (28%), Gaps = 55/310 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78 ++LV++NI +G D + + + AD++ LQE+ N Sbjct: 1 MKLVTYNIQYGVGLDG-----------QYDVGRIAETVR--GADVIALQEVTRNNPRNGG 47 Query: 79 ---AVAKVFPKNTWCIFYSTERLIN-----HSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 + Y + N R V K L ++ L Sbjct: 48 RDMVAEIGEALPDYFAVYGSNFEANIGSRIEDGRAITTTFQLGNMVLSKTPIHLSRNLLL 107 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 ++ R A+E L+E I IHL ++ LL+ + Sbjct: 108 PRSRSFEMMNFQRGALEALIETPLGFIRFYSIHLDHRSPVERASQIQFLRQRLLNYALEG 167 Query: 191 -----LKDWITQKKESLVPFVIAGDFNRKINYLG-------NNDDFWKTIDPNDSLIRFP 238 + + + FV GDFN + +F + + ++ Sbjct: 168 GALSGVAEIGLPELPHPEAFVGMGDFNMLAGSPEYVELAGRPDHEFGMPLTADFAVDAAV 227 Query: 239 KEKDSRCNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + + + IDY + + L + R Sbjct: 228 RLDVADLATWVDPKRPEDASRHKRIDYIFTSASLARSLKRLWV-----------DRQAVG 276 Query: 293 SDHCPISIDY 302 SDH P+ + Sbjct: 277 SDHLPVWAEL 286 >gi|330009934|ref|ZP_08306655.1| endonuclease/exonuclease/phosphatase family protein [Klebsiella sp. MS 92-3] gi|328534648|gb|EGF61218.1| endonuclease/exonuclease/phosphatase family protein [Klebsiella sp. MS 92-3] Length = 253 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 40/291 (13%), Positives = 80/291 (27%), Gaps = 49/291 (16%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + + +++ N + LR +++ ADIV LQE+ Sbjct: 4 PTAGFSLNVLTINTHKGFTAFNRRF----------ILPELRDAVRSVSADIVCLQEVMGA 53 Query: 78 NAVAKV----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + V + +P T F + +++ + H AV + Sbjct: 54 HEVHPLHIENWPDTTHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRFPIE-----YYE 108 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 S R + + I + I + D Q L Sbjct: 109 NRDISVGNGEKRGLLYCRIVPPRSGITIHVICVHLGLRADQ-----------RQAQLTML 157 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 +W+ + P V+AGDFN ++ F + + Sbjct: 158 AEWVN-PLPAGEPVVVAGDFNDWRQQANQPLKAQAGLEE-----IFTRARGRPARTFPVS 211 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + + LSDH P+S++ Sbjct: 212 FPLLRLDRIYVKNAHASRPKALALKQ-----------WRHLSDHAPLSVEI 251 >gi|325285996|ref|YP_004261786.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489] gi|324321450|gb|ADY28915.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489] Length = 353 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 37/319 (11%), Positives = 84/319 (26%), Gaps = 50/319 (15%) Query: 25 RLVSWNINTLSEQ-------EGVSLWKNSVKRTTSD-----------YTLLRQYAKNLDA 66 + +N+ L + + K T+ + N Sbjct: 34 TIAFYNLENLFDTINNPNTFDDDRTPLGKDKWTSDKYMAKLKNMSTTLAKIGSSVTNSSP 93 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-NVRVLQ 125 DI+ + E+ + + + + + + H I A+ +K+ + Sbjct: 94 DIIGVCEVENDTVLTDLIQQP---ALINKGYGVIHYNSPDERGIDVALLYKKQAFIPTSF 150 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 +S+ LL KDS R R + + ++ ++I+ + H S ++ + ++L+ Sbjct: 151 KSHRLLLFKDSNYRDYTRDQLIVGGLLDNEEIYFIVNHWPSRSGGEARSRPNRIAAAILN 210 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-----WKTIDPNDSLIRFPKE 240 ++ + + + GDFN K + + + Sbjct: 211 KRIIDSVKRVNINAK----IISMGDFNDDPTNKSFKKVLQTEGRLKKVSDSILFNPMDEL 266 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE-------------------SFSEILYN 281 + D N + Sbjct: 267 YRKGEGSLAYRDKWNVFDQIFFTGNLVNKQKDSYSFWKACIYNAPYLITSKGRYKGYPKR 326 Query: 282 EDDIKSRGKRLSDHCPISI 300 S SDH P+ I Sbjct: 327 TYSGGSYTGGYSDHFPVYI 345 >gi|291441787|ref|ZP_06581177.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC 14672] gi|291344682|gb|EFE71638.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC 14672] Length = 973 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 75/288 (26%), Gaps = 43/288 (14%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 +R+++WN + + T LL ++ DAD++ LQE+ + Sbjct: 143 PSTGSLRVLTWNTLW-------DRYDSDRIDTARRRPLLLAALEDADADVIALQEVEAGL 195 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + +S + + + + L K Sbjct: 196 LALLLRAPWVRAGYTLGTDPGGKDIENS------GLLLLSRLPVREAGRHELGPHK---- 245 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + VE + V HL S + L Sbjct: 246 -----AVTAITVETGSGPLVVATTHLSSDHSHNGPARRQ-----------AELGRLAEGL 289 Query: 199 KESLVPFVIAGDFNRKINYL----GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 ++ GDFN + G D + + P D F + + Sbjct: 290 GGVDGDLILVGDFNDGGDEPAAALGLRDAWTEVHGPGDRTPTFDPGVNPLAAVSSLSGRA 349 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + + + D + G +SDH ++ D Sbjct: 350 SRLDRIFLRAGQLRAIGA------FLRGDSPTTDGLYVSDHYGVAADL 391 >gi|218231608|ref|YP_002368543.1| exodeoxyribonuclease III [Bacillus cereus B4264] gi|218159565|gb|ACK59557.1| exodeoxyribonuclease III [Bacillus cereus B4264] Length = 252 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + +Y + ADI LQE+ + Sbjct: 1 MKLISWNVNGLRAVIAKGEF--------------LEYLEESSADIFCLQEIKLQEGQIDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + ++ A+ K + + D R Sbjct: 47 NLEGYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLDIEEHDQEGRL--- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +++ ++ + + + L + Sbjct: 93 ------ITLEFEDFYMITLYTPNSKRGLERLDYRMKWEDDFRSYIKRL--------DEKK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + +I + + + A Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFSSILEEGFIDTYRYLYPDQEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV+ + + + + + SDHCP+ Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEV-----------MGSDHCPVE 247 Query: 300 IDYDF 304 + +F Sbjct: 248 LHINF 252 >gi|39933358|ref|NP_945634.1| exodeoxyribonuclease III [Rhodopseudomonas palustris CGA009] gi|39652983|emb|CAE25725.1| possible exodeoxyribonuclease III [Rhodopseudomonas palustris CGA009] Length = 270 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 36/306 (11%), Positives = 78/306 (25%), Gaps = 65/306 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + L +WNIN L+ ++ K DI+ LQE Sbjct: 3 LTLTTWNIN----------------SVRLRIDLVAKFLKAQRPDILCLQETKCP---DDA 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + RL + + +AV K V DS + Sbjct: 44 FPLKRFK------RLGYEHIALNGQKGYHGVAVISKLPFVTTDIRTFCDIIDSRHIS--- 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + + N + + + ++ + D + +P +K Sbjct: 95 --VSVKTDENAPPLVLHNFYVPAG--GDIPDPAVNPKFKHKLSFLDEMKACEPLHPSGDQ 150 Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N + + + + + Sbjct: 151 RHILVGDLNVAPHEHDVWSHKQLLKVVSHTPVECEKLLAVLRAGNWVDVARERIPLDQKV 210 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + ++ + +R SDH P Sbjct: 211 YTWWSYRAADWTVGDRGRRLDHIWVSEALKDRVVD-------FKVLRDARSWERPSDHVP 263 Query: 298 ISIDYD 303 +++ + Sbjct: 264 VTMTME 269 >gi|284993327|ref|YP_003411882.1| exodeoxyribonuclease III Xth [Geodermatophilus obscurus DSM 43160] gi|284066573|gb|ADB77511.1| exodeoxyribonuclease III Xth [Geodermatophilus obscurus DSM 43160] Length = 264 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 39/302 (12%), Positives = 76/302 (25%), Gaps = 63/302 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N RT +D + + + D D++ LQE + Sbjct: 1 MRIATWNVN--------------SIRTRAD--RVVAWLQRSDVDVLALQETKCRDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + + + +A+ + + G + Sbjct: 41 ------QFPESCFTDLGYQVAHVGHSQWNGVALLSRVG-LEDVEVAFPGQPGFGNPEPAV 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A L G ++W L + E +L + A WL + + Sbjct: 94 EARALAATCGGVRVWSLYVPNGRTLTDPHYEYKLRWLGALRTAAAGWLAE------DGGA 147 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + GD+N ++ I Sbjct: 148 QVALVGDWNIAPQDDDVWDVRVFAHSTHVSEPERAAFRAIVDAGYADVVRPHTPGPGVFT 207 Query: 249 KNLRN--------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ + D + +GK SDH P+ + Sbjct: 208 YWDYTQLRFARREGMRIDFVLGSPALA-------VRVTNALIDRQERKGKGASDHAPVVV 260 Query: 301 DY 302 D Sbjct: 261 DL 262 >gi|187732981|ref|YP_001881024.1| endonuclease/exonuclease/phosphatase family protein [Shigella boydii CDC 3083-94] gi|187429973|gb|ACD09247.1| endonuclease/exonuclease/phosphatase family protein [Shigella boydii CDC 3083-94] Length = 253 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 81/288 (28%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ NI LR + + ADIV LQE+ + V Sbjct: 9 SFKVLTINIQKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P + F + + + + + H AV + S Sbjct: 59 LHVENWPDTSHYEFLADTMCRDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A R + + GK I V+ +HL + Q L +W Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + P ++AGDFN + +D F + Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + LSDH P+S + Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251 >gi|332286021|ref|YP_004417932.1| hypothetical protein PT7_2768 [Pusillimonas sp. T7-7] gi|330429974|gb|AEC21308.1| hypothetical protein PT7_2768 [Pusillimonas sp. T7-7] Length = 284 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 84/318 (26%), Gaps = 77/318 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+VS+NI+ G + LR L D++FLQE+ N Sbjct: 4 IRVVSYNIHKGRSATGG----------RESLSDLRLGLYGLHPDLLFLQEVQGRNDQRLS 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + A+ + + + S R R Sbjct: 54 LDTQHEFLAAALNMHAAYGCNAIRPHTDHGNALLSRYPILEHE-----NQDISDHRLEQR 108 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + L+E+ G + L +HL F S+Q L + I + Sbjct: 109 GLLHALIEVQGVSVHCLVVHLGLFAGG-------------RSRQVAALVERIKRMVPEGE 155 Query: 204 PFVIAGDFNRKINY-----------------LGNNDD-----------FWKTIDPNDSLI 235 P +IAGDFN N ++D T+ Sbjct: 156 PMLIAGDFNDWSNRLAPLFVQQLGLYEVFAIAPHHDPGPRLLRHSVTRLRNTLRGVSPTP 215 Query: 236 RFPKEKD----------SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + + +D Q F+ Sbjct: 216 LAATVHELGINGAARMTPPPRTFPAAFPWLRLDRIY----------QRGFAVRKARVLQG 265 Query: 286 KSRGKRLSDHCPISIDYD 303 K++SDH P+ + + Sbjct: 266 VP-WKQISDHAPLYAELE 282 >gi|315502378|ref|YP_004081265.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. L5] gi|315408997|gb|ADU07114.1| Endonuclease/exonuclease/phosphatase [Micromonospora sp. L5] Length = 675 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 41/289 (14%), Positives = 84/289 (29%), Gaps = 57/289 (19%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 T A VR+ ++NI +G D + + + AD+V L E+ Sbjct: 442 ATTTPAA--VRVAAYNIRMGFGLDG-----------RLDVDAVARELR--GADVVLLSEV 486 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + RL D AV + Q+ L Sbjct: 487 DRGWWL----NGGHDTLALVAGRLGMPYVFAPAADPVWGDAVLSRFPMRSGQTRRLTAHG 542 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A+ + +++ G+++ V+ HL+ D +QA + + Sbjct: 543 APTGAQ----ALGVTLDLGGRELAVVATHLQPPPGRDP------------VEQAGEVAAF 586 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + P V+ GD N + + D + + + + Sbjct: 587 -AGRYANGRPLVLGGDLNTEPD-----DPAFAEFTRAGLVDAL--AAARPLRTSPADEPR 638 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID+ + ++ +E SDH P+++ Sbjct: 639 TQIDHVFVSPGLTAGEVRAPRTE--------------ASDHLPVTLTVT 673 >gi|30263740|ref|NP_846117.1| exodeoxyribonuclease III [Bacillus anthracis str. Ames] gi|47529159|ref|YP_020508.1| exodeoxyribonuclease III [Bacillus anthracis str. 'Ames Ancestor'] gi|49186585|ref|YP_029837.1| exodeoxyribonuclease III [Bacillus anthracis str. Sterne] gi|65321063|ref|ZP_00394022.1| COG0708: Exonuclease III [Bacillus anthracis str. A2012] gi|118478961|ref|YP_896112.1| exodeoxyribonuclease III [Bacillus thuringiensis str. Al Hakam] gi|165872421|ref|ZP_02217056.1| exodeoxyribonuclease III [Bacillus anthracis str. A0488] gi|167639873|ref|ZP_02398142.1| exodeoxyribonuclease III [Bacillus anthracis str. A0193] gi|170706859|ref|ZP_02897317.1| exodeoxyribonuclease III [Bacillus anthracis str. A0389] gi|177652038|ref|ZP_02934584.1| exodeoxyribonuclease III [Bacillus anthracis str. A0174] gi|190568466|ref|ZP_03021373.1| exodeoxyribonuclease III [Bacillus anthracis Tsiankovskii-I] gi|196034121|ref|ZP_03101531.1| exodeoxyribonuclease III [Bacillus cereus W] gi|196038388|ref|ZP_03105697.1| exodeoxyribonuclease III [Bacillus cereus NVH0597-99] gi|196044665|ref|ZP_03111900.1| exodeoxyribonuclease III [Bacillus cereus 03BB108] gi|218904866|ref|YP_002452700.1| exodeoxyribonuclease III [Bacillus cereus AH820] gi|225865717|ref|YP_002751095.1| exodeoxyribonuclease III [Bacillus cereus 03BB102] gi|227813360|ref|YP_002813369.1| exodeoxyribonuclease III [Bacillus anthracis str. CDC 684] gi|228916370|ref|ZP_04079939.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228928786|ref|ZP_04091820.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935036|ref|ZP_04097866.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228947401|ref|ZP_04109692.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229092775|ref|ZP_04223913.1| Exodeoxyribonuclease [Bacillus cereus Rock3-42] gi|229123254|ref|ZP_04252458.1| Exodeoxyribonuclease [Bacillus cereus 95/8201] gi|229185967|ref|ZP_04313138.1| Exodeoxyribonuclease [Bacillus cereus BGSC 6E1] gi|229603277|ref|YP_002867975.1| exodeoxyribonuclease III [Bacillus anthracis str. A0248] gi|254721165|ref|ZP_05182956.1| exodeoxyribonuclease III [Bacillus anthracis str. A1055] gi|254735775|ref|ZP_05193481.1| exodeoxyribonuclease III [Bacillus anthracis str. Western North America USA6153] gi|254751095|ref|ZP_05203134.1| exodeoxyribonuclease III [Bacillus anthracis str. Vollum] gi|254759412|ref|ZP_05211437.1| exodeoxyribonuclease III [Bacillus anthracis str. Australia 94] gi|30258384|gb|AAP27603.1| exodeoxyribonuclease III [Bacillus anthracis str. Ames] gi|47504307|gb|AAT32983.1| exodeoxyribonuclease III [Bacillus anthracis str. 'Ames Ancestor'] gi|49180512|gb|AAT55888.1| exodeoxyribonuclease III [Bacillus anthracis str. Sterne] gi|118418186|gb|ABK86605.1| exodeoxyribonuclease III [Bacillus thuringiensis str. Al Hakam] gi|164711859|gb|EDR17401.1| exodeoxyribonuclease III [Bacillus anthracis str. A0488] gi|167512274|gb|EDR87651.1| exodeoxyribonuclease III [Bacillus anthracis str. A0193] gi|170128277|gb|EDS97146.1| exodeoxyribonuclease III [Bacillus anthracis str. A0389] gi|172082407|gb|EDT67472.1| exodeoxyribonuclease III [Bacillus anthracis str. A0174] gi|190560470|gb|EDV14448.1| exodeoxyribonuclease III [Bacillus anthracis Tsiankovskii-I] gi|195993195|gb|EDX57153.1| exodeoxyribonuclease III [Bacillus cereus W] gi|196024700|gb|EDX63372.1| exodeoxyribonuclease III [Bacillus cereus 03BB108] gi|196030796|gb|EDX69394.1| exodeoxyribonuclease III [Bacillus cereus NVH0597-99] gi|218539943|gb|ACK92341.1| exodeoxyribonuclease III [Bacillus cereus AH820] gi|225789176|gb|ACO29393.1| exodeoxyribonuclease III [Bacillus cereus 03BB102] gi|227006454|gb|ACP16197.1| exodeoxyribonuclease III [Bacillus anthracis str. CDC 684] gi|228597519|gb|EEK55168.1| Exodeoxyribonuclease [Bacillus cereus BGSC 6E1] gi|228660030|gb|EEL15666.1| Exodeoxyribonuclease [Bacillus cereus 95/8201] gi|228690573|gb|EEL44354.1| Exodeoxyribonuclease [Bacillus cereus Rock3-42] gi|228812254|gb|EEM58584.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228824606|gb|EEM70408.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830871|gb|EEM76474.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228843280|gb|EEM88359.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229267685|gb|ACQ49322.1| exodeoxyribonuclease III [Bacillus anthracis str. A0248] Length = 252 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 80/305 (26%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + +Y + +ADI LQE+ + Sbjct: 1 MKFISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQEGQIDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + ++ A+ K + + D R Sbjct: 47 NVEGYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + L + Sbjct: 92 -----VITLEFEDFYIITLYTPNSKRGLERLEYRMKWEDDFRAYIKRL--------DEKK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V GD N + + + I + + + A Sbjct: 139 SVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTCILEEGFIDTYRYLYPDQEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV+ + + + + SDHCP+ Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDQITAAKINSEV-----------MGSDHCPVE 247 Query: 300 IDYDF 304 + +F Sbjct: 248 LHINF 252 >gi|302792621|ref|XP_002978076.1| hypothetical protein SELMODRAFT_418021 [Selaginella moellendorffii] gi|300154097|gb|EFJ20733.1| hypothetical protein SELMODRAFT_418021 [Selaginella moellendorffii] Length = 355 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 97/339 (28%), Gaps = 63/339 (18%) Query: 19 SVAQKVRLVSWNINT-------LSEQEGVSLW--KNSVKRTTSDYTLLRQYAKNLDADIV 69 R+VS+NI L ++ +R + + +LDAD++ Sbjct: 24 PETGSFRVVSYNILAQVYVKSSLFPHSPSFFCIAEHFFRRWETRSEQVLSRLLSLDADLL 83 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 LQE+ + + K + S + +R N I + + ++L+Q + Sbjct: 84 CLQELDEFESFYK-------PLLESKGYSSIYIQRSGNRRDGCGIIYKPERCQLLKQQFL 136 Query: 130 LLGAKDSFSRAGNRRAVELL------------------------VEINGKKIWVLDIHLK 165 R + + N ++ I Sbjct: 137 DYNDIAPDETTAGRASESVEEENDRDVSDPRVRFRRNCVGILSAFRFNHAPSNIVVIANT 196 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 + +L++ L + + I+Q+ S ++AGDFN N Sbjct: 197 HLYWDPALQDVKLAQAKYLLAKLSQFEKEISQEFNSNPVVLVAGDFNSTPGDRVYNYITS 256 Query: 226 KTIDPNDSL---------------------IRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 + + + + N + K +DY Sbjct: 257 GRRNSGPDVELSSFKVPDLESLKVPAIPLDSLYAAVQGEPALTNWSPNFKGTLDYIFFSP 316 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +A ++ E+ + ++ SDH PI D+ Sbjct: 317 SASMR--PKTILEVPPDVEEGLPNHFHPSDHLPIGADFS 353 >gi|289450732|ref|YP_003475042.1| exodeoxyribonuclease III [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185279|gb|ADC91704.1| exodeoxyribonuclease III [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 251 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 78/302 (25%), Gaps = 78/302 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +L+SWN+N L + ++L ADI+ +QE A Sbjct: 3 KLISWNVNGLRACVEKGF---------------VESMQHLSADIICIQE-SKLQAGQIDL 46 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 +C +++ + ++ A+ K + + D R Sbjct: 47 DLPGYCQYWN----------YARKKGYSGTAIFSKIEPLRVTYGMNMPDHDQEGRL---- 92 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + ++ ++ + Q L+ P Sbjct: 93 -----ITAEFPDYYLCTVYTPNSQDGLKRLVYRQSWERDFLTYLQELRRV--------KP 139 Query: 205 FVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 +I GD N + ++T+ + F + Sbjct: 140 VIICGDLNVAHREIDLKNPAANRKNPGFTDEERAEFQTLLDAGFVDTFRYFYPEKPEEYS 199 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF++ L S + ++ SDHCP+ + Sbjct: 200 WWSYRFNARSRNAGWRIDYFLVSNELTDRLQSASIHQEIF-----------GSDHCPVEL 248 Query: 301 DY 302 Sbjct: 249 IL 250 >gi|226941364|ref|YP_002796438.1| XthA [Laribacter hongkongensis HLHK9] gi|226716291|gb|ACO75429.1| XthA [Laribacter hongkongensis HLHK9] Length = 255 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 33/301 (10%), Positives = 78/301 (25%), Gaps = 72/301 (23%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L +WN+N+L + + + D++ LQE+ Sbjct: 3 LATWNVNSL----------------KVRLPQVLDWLGSNPVDVLCLQELKLEQD------ 40 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + + +A+ + + + D Sbjct: 41 ----KFPLADIEAAGYRAVWLGQKTYNGVAILVRAPLAPLEPVAGMPGYDD--------P 88 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++ + V+ + + +DS + Y + L ++ ++E Sbjct: 89 QARVIAATIDDVRVVCAYCVNGEAVDSDKYRYK------LEWFARLHAYLAAERERHPKL 142 Query: 206 VIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 V+ GDFN + + + + F + D + Sbjct: 143 VLTGDFNIAPDDRDVYSPESWAGKVLCSVPERQAFGDLLGLGLVDAFRQLHDGDGH-YSW 201 Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + ID+ ++ L D + +R SDH P+ Sbjct: 202 WDYRQGMFRRDKGLRIDHVLLSAPLAASLEACHI-------DKVPRGWERPSDHAPVVAR 254 Query: 302 Y 302 + Sbjct: 255 F 255 >gi|149914968|ref|ZP_01903497.1| exodeoxyribonuclease III [Roseobacter sp. AzwK-3b] gi|149811156|gb|EDM70993.1| exodeoxyribonuclease III [Roseobacter sp. AzwK-3b] Length = 260 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 81/303 (26%), Gaps = 67/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ S+NIN + L + D+V LQE+ S V + Sbjct: 1 MKIASFNING----------------IKARAQALTDWLDEAQPDVVVLQEIKS---VDEG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + +A+ + +D +R Sbjct: 42 FPCELF-------EDRGYRVETHGQKSFNGVAILSRLPLEDVTRGLPGDDEDEQARW--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E V + + V ++L + + Y + + LK + Sbjct: 92 --IEGTVIGDKAAVRVCGLYLPNGNPAPGPKYDYKLA------WMERLKARAEALLAAEE 143 Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++AGD+N ++ I F + Sbjct: 144 PALMAGDYNVIPQDEDAKRPEAWRKDALALPETRAAFRRIVNLGFTEAFRAFHKGPSHYT 203 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ID+F++ A L D ++ SDH PI I Sbjct: 204 FWDYQAGAWNRDDGIRIDHFLLTPQAADLLGDCQI-------DRDIRDREKPSDHVPIWI 256 Query: 301 DYD 303 D Sbjct: 257 TLD 259 >gi|239933421|ref|ZP_04690374.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC 14672] Length = 947 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 75/288 (26%), Gaps = 43/288 (14%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 +R+++WN + + T LL ++ DAD++ LQE+ + Sbjct: 117 PSTGSLRVLTWNTLW-------DRYDSDRIDTARRRPLLLAALEDADADVIALQEVEAGL 169 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + +S + + + + L K Sbjct: 170 LALLLRAPWVRAGYTLGTDPGGKDIENS------GLLLLSRLPVREAGRHELGPHK---- 219 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + VE + V HL S + L Sbjct: 220 -----AVTAITVETGSGPLVVATTHLSSDHSHNGPARRQ-----------AELGRLAEGL 263 Query: 199 KESLVPFVIAGDFNRKINYL----GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 ++ GDFN + G D + + P D F + + Sbjct: 264 GGVDGDLILVGDFNDGGDEPAAALGLRDAWTEVHGPGDRTPTFDPGVNPLAAVSSLSGRA 323 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + + + D + G +SDH ++ D Sbjct: 324 SRLDRIFLRAGQLRAIGA------FLRGDSPTTDGLYVSDHYGVAADL 365 >gi|15607568|ref|NP_214941.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis H37Rv] gi|15839814|ref|NP_334851.1| exodeoxyribonuclease III [Mycobacterium tuberculosis CDC1551] gi|31791605|ref|NP_854098.1| exodeoxyribonuclease III protein [Mycobacterium bovis AF2122/97] gi|121636341|ref|YP_976564.1| putative exodeoxyribonuclease III protein xthA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660192|ref|YP_001281715.1| exodeoxyribonuclease III [Mycobacterium tuberculosis H37Ra] gi|148821623|ref|YP_001286377.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis F11] gi|167970756|ref|ZP_02553033.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis H37Ra] gi|215402179|ref|ZP_03414360.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis 02_1987] gi|215409943|ref|ZP_03418751.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis 94_M4241A] gi|215425649|ref|ZP_03423568.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis T92] gi|215429249|ref|ZP_03427168.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis EAS054] gi|215444523|ref|ZP_03431275.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis T85] gi|218752060|ref|ZP_03530856.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis GM 1503] gi|219556248|ref|ZP_03535324.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis T17] gi|224988813|ref|YP_002643500.1| putative exodeoxyribonuclease III protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253797351|ref|YP_003030352.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis KZN 1435] gi|254230777|ref|ZP_04924104.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis C] gi|254363391|ref|ZP_04979437.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis str. Haarlem] gi|254549374|ref|ZP_05139821.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185294|ref|ZP_05762768.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis CPHL_A] gi|260199425|ref|ZP_05766916.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis T46] gi|260203577|ref|ZP_05771068.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis K85] gi|289441807|ref|ZP_06431551.1| exodeoxyribonuclease III [Mycobacterium tuberculosis T46] gi|289445967|ref|ZP_06435711.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis CPHL_A] gi|289552676|ref|ZP_06441886.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis KZN 605] gi|289568343|ref|ZP_06448570.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis T17] gi|289573012|ref|ZP_06453239.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis K85] gi|289744123|ref|ZP_06503501.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis 02_1987] gi|289748911|ref|ZP_06508289.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis T92] gi|289752456|ref|ZP_06511834.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis EAS054] gi|289756500|ref|ZP_06515878.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis T85] gi|289760543|ref|ZP_06519921.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis GM 1503] gi|294995932|ref|ZP_06801623.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis 210] gi|297632911|ref|ZP_06950691.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis KZN 4207] gi|297729886|ref|ZP_06959004.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis KZN R506] gi|298523904|ref|ZP_07011313.1| exodeoxyribonuclease III protein XthA [Mycobacterium tuberculosis 94_M4241A] gi|306774523|ref|ZP_07412860.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu001] gi|306779272|ref|ZP_07417609.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu002] gi|306783061|ref|ZP_07421383.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu003] gi|306787428|ref|ZP_07425750.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu004] gi|306791980|ref|ZP_07430282.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu005] gi|306796167|ref|ZP_07434469.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu006] gi|306966432|ref|ZP_07479093.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu009] gi|306970627|ref|ZP_07483288.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu010] gi|307078353|ref|ZP_07487523.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu011] gi|307082911|ref|ZP_07492024.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu012] gi|313657215|ref|ZP_07814095.1| exodeoxyribonuclease III [Mycobacterium tuberculosis KZN V2475] gi|1817693|emb|CAB06567.1| PROBABLE EXODEOXYRIBONUCLEASE III PROTEIN XTHA (EXONUCLEASE III) (EXO III) (AP ENDONUCLEASE VI) [Mycobacterium tuberculosis H37Rv] gi|13879945|gb|AAK44665.1| exodeoxyribonuclease III [Mycobacterium tuberculosis CDC1551] gi|31617191|emb|CAD93298.1| PROBABLE EXODEOXYRIBONUCLEASE III PROTEIN XTHA (EXONUCLEASE III) (EXO III) (AP ENDONUCLEASE VI) [Mycobacterium bovis AF2122/97] gi|121491988|emb|CAL70451.1| Probable exodeoxyribonuclease III protein xthA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599836|gb|EAY58846.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis C] gi|134148905|gb|EBA40950.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis str. Haarlem] gi|148504344|gb|ABQ72153.1| exodeoxyribonuclease III [Mycobacterium tuberculosis H37Ra] gi|148720150|gb|ABR04775.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis F11] gi|224771926|dbj|BAH24732.1| putative exodeoxyribonuclease III protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253318854|gb|ACT23457.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis KZN 1435] gi|289414726|gb|EFD11966.1| exodeoxyribonuclease III [Mycobacterium tuberculosis T46] gi|289418925|gb|EFD16126.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis CPHL_A] gi|289437308|gb|EFD19801.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis KZN 605] gi|289537443|gb|EFD42021.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis K85] gi|289542096|gb|EFD45745.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis T17] gi|289684651|gb|EFD52139.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis 02_1987] gi|289689498|gb|EFD56927.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis T92] gi|289693043|gb|EFD60472.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis EAS054] gi|289708049|gb|EFD72065.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis GM 1503] gi|289712064|gb|EFD76076.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis T85] gi|298493698|gb|EFI28992.1| exodeoxyribonuclease III protein XthA [Mycobacterium tuberculosis 94_M4241A] gi|308216872|gb|EFO76271.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu001] gi|308327716|gb|EFP16567.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu002] gi|308332078|gb|EFP20929.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu003] gi|308335893|gb|EFP24744.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu004] gi|308339470|gb|EFP28321.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu005] gi|308343335|gb|EFP32186.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu006] gi|308355828|gb|EFP44679.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu009] gi|308359748|gb|EFP48599.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu010] gi|308363690|gb|EFP52541.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu011] gi|308367342|gb|EFP56193.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu012] gi|323721099|gb|EGB30161.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis CDC1551A] gi|326902253|gb|EGE49186.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis W-148] gi|328457137|gb|AEB02560.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis KZN 4207] Length = 291 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 66/305 (21%), Gaps = 66/305 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N + + + D D++ +QE + Sbjct: 24 LRLATWNVN----------------SIRTRLDRVLDWLGRADVDVLAMQETKCPDG---- 63 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + D +A+ + + S Sbjct: 64 ------QFPALPLFELGYDVAHVGFDQWNGVAIASRVGLDDVRVGFDGQPSWSGKPEVAA 117 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202 + I V +++ + LD TY L+D Sbjct: 118 TTEARALGATCGGIRVWSLYVPNGRALDDPHYTYKLD------WLAALRDTAEGWLRDDP 171 Query: 203 -VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P + GD+N + I Sbjct: 172 AAPIALMGDWNIAPTDDDVWSTEFFAGCTHVSEPERKAFNAIVDAQFTDVVRPFTPGP-G 230 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 ID+ + + + +GK SDH P Sbjct: 231 VYTYWDYTQLRFPKKQGMRIDFILGSPALA-------ARVMDAQIVREERKGKAPSDHAP 283 Query: 298 ISIDY 302 + +D Sbjct: 284 VLVDL 288 >gi|269216697|ref|ZP_06160551.1| exodeoxyribonuclease III [Slackia exigua ATCC 700122] gi|269129931|gb|EEZ61014.1| exodeoxyribonuclease III [Slackia exigua ATCC 700122] Length = 264 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 81/308 (26%), Gaps = 75/308 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL+SWN+N L + LDAD+ LQE Sbjct: 1 MRLISWNVNGLRAVVKKGFN---------------EAFAALDADVFALQETKLQEG-QIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +S + + AV + + + A D+ R Sbjct: 45 LDLPGYVQNWSYAEKKGY----------SGTAVFSREEPLQVVHHVGTPALDTEGRICA- 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK-----DWITQK 198 +K W +D++ + + + + + L+ + + Sbjct: 94 --------CEFEKFWFVDVYTPNAQPELARLEHRMAWDAAFREFCKNLEAGVVPEGLGYA 145 Query: 199 KESLVPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 P ++ GDFN + + ++ F Sbjct: 146 SAEPKPVIMCGDFNVAHQEIDLKNPRSNRGNPGFSDEERSSFTSLLDAGFADTFRMLHPD 205 Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 A + IDYF++ + S + + SD Sbjct: 206 LEGAYSWWSYRFNARKNNAGWRIDYFLVSDALRGAIESASIYDEV-----------MGSD 254 Query: 295 HCPISIDY 302 HCP+ +D Sbjct: 255 HCPVGLDI 262 >gi|302537782|ref|ZP_07290124.1| exodeoxyribonuclease III [Streptomyces sp. C] gi|302446677|gb|EFL18493.1| exodeoxyribonuclease III [Streptomyces sp. C] Length = 259 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 79/303 (26%), Gaps = 68/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++N+N T+ L + ++ D++ +QE Sbjct: 1 MRIATYNVN----------------SITARLPRLLAWLESSGTDVLCVQETKCSAE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + R + + + +A+ + + L G D R Sbjct: 41 ------QFPAAELRELGYESVVNATGRWNGVALLSRVG-LEDVVVGLPGGPDYEGVQEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + ++ Y L I + Sbjct: 94 A-----ISATCGGVRVWSVYVPNGREVEHDHYGYK------LNWFGALATAIAEDAAGTR 142 Query: 204 PFVIAGDFNRKINYLGNND-DFWKTIDPNDSLIRFPKEKDSRC-------------NANK 249 PF + GDFN D + + R E Sbjct: 143 PFAVLGDFNVAPTDEDVYDPAVFAGLTHVTPAERAALEALRTAGLADVMPRALKYDRPYT 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID ++ K + D + +GK SDH P+ + Sbjct: 203 FWDYRQLAFPKNRGMRIDLVYGNEPFAKAVKDAYV-------DREERKGKGASDHAPVVV 255 Query: 301 DYD 303 D D Sbjct: 256 DLD 258 >gi|149188512|ref|ZP_01866805.1| hypothetical protein VSAK1_20994 [Vibrio shilonii AK1] gi|148837730|gb|EDL54674.1| hypothetical protein VSAK1_20994 [Vibrio shilonii AK1] Length = 334 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 58/335 (17%), Positives = 107/335 (31%), Gaps = 52/335 (15%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSL---WKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 T + K+++ + N+ E + K+ L+Q L++D+V Sbjct: 3 SNTLTQINKLKVTTCNLCNFVEPPFAYYEMENIYTAKQWQQKTLWLKQTLSELNSDVVAF 62 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 QE+ S A+ + + +++ + A A R V + L Sbjct: 63 QEVFSVEALRALVKSLGY-GYFTYNTEPRLESGYIYSHPALAFASRYPIV-----RHSNL 116 Query: 132 GAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSP----------- 179 + F +R A+ + + I G ++ + ++HLKS EN + Sbjct: 117 TSLAPFEGEFSRPALHISLNIEGIGELDMYNVHLKSKRPTLPDENLDNKSTVDAWLVETQ 176 Query: 180 ----SCSLLSQQAQWLKDWITQKKES-LVPFVIAGDFNRKINYLGNN------------- 221 S + Q+A L I Q K PF++ GDFN I Sbjct: 177 GQTLSSLMRIQEAGALHQAIVQNKRCYQRPFLLLGDFNNSIGSNEFEPFRSQYRHRRKDT 236 Query: 222 DDFWKTIDPNDSLIRFPKEKD-------SRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 K +DS PK K + + +D+ ++ + Sbjct: 237 RADIKAYHFHDSWDLVPKGKPVRPVDEIKPPITHYYGESGSRLDHILLSSEFCSNYERSM 296 Query: 275 FSEILYN------EDDIKSRGKRLSDHCPISIDYD 303 F Y D I +DH +S+ ++ Sbjct: 297 FEVTDYQLTNKHIIDPIFGIDDLSTDHALVSVSFE 331 >gi|240851283|ref|YP_002972686.1| exodeoxyribonuclease III [Bartonella grahamii as4aup] gi|240268406|gb|ACS51994.1| exodeoxyribonuclease III [Bartonella grahamii as4aup] Length = 269 Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 36/307 (11%), Positives = 84/307 (27%), Gaps = 68/307 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 R+ +WNIN + QY + AD++ LQE +A+ Sbjct: 3 FRIATWNIN----------------SIRLRLAQVFQYLELFSADVLCLQETKCPDAL--- 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + E S + +A+ + + +D Sbjct: 44 ------FPVGAFEAAGYKHIALSGQKSYNGVAIVSRLPFKKVEKRFFCQNQDCRY----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++VE +G+ + + + ++ + D + + + + I + + Sbjct: 93 --ISVIVEAHGRNLRIHNFYVPAG--GDIPDADVNEKFQHKLDFLEEMSS-IRADQGDGL 147 Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247 ++ GD N + ++ K + + Sbjct: 148 SSLLVGDLNIAPLAEDVWSHQQLLKVVSHTPIETERLQDLCCQGGWVDLMRLHIPVPTKL 207 Query: 248 NKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + F++ S +R SDH P Sbjct: 208 YTWWSYRARDWAFTDYGRRLDHIWSSPDLAPFVVDLSI-------FRDARGWERPSDHIP 260 Query: 298 ISIDYDF 304 + +DF Sbjct: 261 VQTVFDF 267 >gi|300743782|ref|ZP_07072802.1| exodeoxyribonuclease III [Rothia dentocariosa M567] gi|300380143|gb|EFJ76706.1| exodeoxyribonuclease III [Rothia dentocariosa M567] Length = 275 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 83/310 (26%), Gaps = 64/310 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-AVAK 82 +R+ S N+N + + + + D DI+ LQE+ + + V + Sbjct: 1 MRVASVNVNGIRA---------------AYRKDMATWLAGRDVDILCLQEVRAPDKIVRE 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + ++ W I ++ + H ++ + + D+ Sbjct: 46 LLNEDDWNILHAEAAAKGRAGVLVATRKHPNANGELLK-NQPVATRSTIGEDYFADAGRW 104 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 + G+ + V+ ++ S ++ + + L Sbjct: 105 VEADYTL-----PTGETLTVVSAYVHSGEVGTPRQDDKYRFLDRMLVRLPELAQ------ 153 Query: 200 ESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDS 243 +I GD N L + F K K Sbjct: 154 -HSDHVLIVGDLNVGHTELDIKNWKANQKRAGFLPEERAYFDKFFGEIGYEDVARKLAGE 212 Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + IDY + ++ + D S +R SD Sbjct: 213 VPGPYTWWSYRGKAFDNDAGWRIDYHMATPALAAKAVEATV-------DRAASYDERFSD 265 Query: 295 HCPISIDYDF 304 H P+ +DY F Sbjct: 266 HAPLVVDYQF 275 >gi|293400493|ref|ZP_06644638.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305519|gb|EFE46763.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 253 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 81/305 (26%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VSWN+N + + + +DADI +QE + Sbjct: 3 MKMVSWNVNGIRACMTKGFM---------------DFFQEIDADIFCIQETKMQPGQLDI 47 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S + ++ V K + + D R Sbjct: 48 ATPGYYQYINSA-----------DKKGYSGTMVFTKEKPIAVTYDLGIDEHDHEGR---- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + + L + Sbjct: 93 -----VITCEYENFYLVCVYTPNSKDGLLRLDYRMQWEDDFRAYLNAL--------KEKK 139 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N T+ + + F + Sbjct: 140 SVIVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERAKMTTLQQSGFIDSFRYLYPEQEGIY 199 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ ++A + + S ++ SDHCP+S Sbjct: 200 SWWSYRFKAREKNAGWRIDYFLVSEDAKDKIQEASIHTDVF-----------GSDHCPVS 248 Query: 300 IDYDF 304 +D DF Sbjct: 249 LDIDF 253 >gi|15838527|ref|NP_299215.1| exodeoxyribonuclease III [Xylella fastidiosa 9a5c] gi|9107031|gb|AAF84735.1|AE004013_1 exodeoxyribonuclease III [Xylella fastidiosa 9a5c] Length = 264 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 85/304 (27%), Gaps = 73/304 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+R+ SWN+N+L+ + L+Q+ D++ LQE Sbjct: 2 KMRIASWNVNSLN----------------VRLSQLQQWLVEAAPDVLGLQET-------- 37 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + + + +A+ + Q Sbjct: 38 --KLEDHQFPEAALAALGYVSVYAGQKTYNGVALLARVALEDVQV------GIPGFEDVQ 89 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 RR + V+ I V+++++ + + + + Y S + W+ ++ + Sbjct: 90 RRVIAATVD----GIRVVNLYVVNGQEVGTEKYAYKLS------WLDAVYHWLAEELQRY 139 Query: 203 VPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNA 247 V+ GDFN + D L + Sbjct: 140 PRLVVLGDFNIAPDARDVYDPQVWNEDHILTSTTERVALGKLLGLGLHDGFRLHHQDTGI 199 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID ++ + ++ D + +R SDH P Sbjct: 200 FSWWDYRQASFRRNRGLRIDLTLVSEALRAQVVASGI-------DCVPRGWERPSDHAPA 252 Query: 299 SIDY 302 I+ Sbjct: 253 WIEL 256 >gi|331694970|ref|YP_004331209.1| exodeoxyribonuclease III Xth [Pseudonocardia dioxanivorans CB1190] gi|326949659|gb|AEA23356.1| exodeoxyribonuclease III Xth [Pseudonocardia dioxanivorans CB1190] Length = 289 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 79/303 (26%), Gaps = 64/303 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 VRL +WN+N + L + D+V LQE K+ Sbjct: 4 VRLATWNVN----------------SAKTRLPRLLPWLDQRAPDVVCLQE-------TKL 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + F R + +A+ + + + + Sbjct: 41 ADADWAETFDDAMRERGYEVAHYGQGRWNGVALLSRVGLDDVERGLPAEPRFPDDDSAP- 99 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A L G + V +++ + D Y + L+ + Sbjct: 100 EARALTATCGG--LRVTSVYVPNGRTPDDPHYAYK------LRWLDALQAMVAD--GPTA 149 Query: 204 PFVIAGDFNRKINYLGNNDDFW------------KTIDP--NDSLIRFPKEKDSRCNANK 249 V+AGD N D K ++ L +++ Sbjct: 150 TSVVAGDMNIAPTDADVWDPSLFVDSTHVTPAERKALEALTGLGLHDVVRDRWPGQRVFS 209 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + ID ++ +A + D +G SDH P+ + Sbjct: 210 YWDYRAGRFHQDKGMRIDLVLVGDDAVGRVQAAWI-------DRQARKGSGPSDHAPVMV 262 Query: 301 DYD 303 D D Sbjct: 263 DLD 265 >gi|254413694|ref|ZP_05027463.1| exodeoxyribonuclease III [Microcoleus chthonoplastes PCC 7420] gi|196179291|gb|EDX74286.1| exodeoxyribonuclease III [Microcoleus chthonoplastes PCC 7420] Length = 264 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 41/307 (13%), Positives = 97/307 (31%), Gaps = 71/307 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ +WN+N RT D + Q+ D++ LQE + Sbjct: 1 MKIATWNVN--------------SIRTRQD--HVCQWLTANPVDVLCLQETKVVDEQFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 F + ++ S ++ N A+ RK V +L ++ G Sbjct: 45 SRFEDLGYHLYVSGQKSYN----------GVALFSRKPLEAVTVGFTGVLTPEEVGELDG 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R + +++ + ++++++ + + S + Y S + LK+++ E+ Sbjct: 95 QKRLITGILD----GVRIINLYVPNGAEVGSEKYEYKLS------WLKLLKEYVRSLLET 144 Query: 202 LVP-FVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRC 245 I GDFN + + + + F K Sbjct: 145 QPHELCICGDFNIAPDDRDIHNPKNKDKHIMASPAERQALEEVLALGLGDAFRKFTQDGG 204 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + ID+ + Y+ + + + SDH Sbjct: 205 H-FSWWDYRHGGFSRNRGWRIDHHYLTPKLYEAATRCRIDVEPRKLE-------KPSDHA 256 Query: 297 PISIDYD 303 P+ ++++ Sbjct: 257 PVIVEFE 263 >gi|302336916|ref|YP_003802122.1| exodeoxyribonuclease III Xth [Spirochaeta smaragdinae DSM 11293] gi|301634101|gb|ADK79528.1| exodeoxyribonuclease III Xth [Spirochaeta smaragdinae DSM 11293] Length = 259 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 76/305 (24%), Gaps = 82/305 (26%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVAK 82 R+ SWN+N + + L +Y AD+V LQE + + Sbjct: 8 RIASWNVNGIRA---------------AQKKGLLEYMMQEHADVVCLQETKAKPEQLDEQ 52 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + ++S+ + + +AV + + + A Sbjct: 53 LLNPSDYRSYFSSAERGGY----------SGVAVYSRKKPLSVSPL-----GIAEFDAEG 97 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R A+ + +++ + + + + C + Sbjct: 98 R-ALLVEFS----DFVLINGYFPNSQSEGARLDYKLAYC-------DAILKRCNSLVGEG 145 Query: 203 VPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 V+ GD+N +D + + Sbjct: 146 RHVVVCGDYNIAHKPIDLARPKENEGNPGFLPEERAWMSSFLDAGYTDTFRIFNNEGG-- 203 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +DYF D+ + + SDHCP Sbjct: 204 NYTWWSYRTKGRERNVGWRLDYFCTDKEFENRVKNSEIRSEV-----------MGSDHCP 252 Query: 298 ISIDY 302 + + Sbjct: 253 VVLTI 257 >gi|239945508|ref|ZP_04697445.1| putative phospholipase [Streptomyces roseosporus NRRL 15998] gi|239991973|ref|ZP_04712637.1| putative phospholipase [Streptomyces roseosporus NRRL 11379] gi|291448965|ref|ZP_06588355.1| sphingomyelinase C [Streptomyces roseosporus NRRL 15998] gi|291351912|gb|EFE78816.1| sphingomyelinase C [Streptomyces roseosporus NRRL 15998] Length = 326 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 89/297 (29%), Gaps = 31/297 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R++S+N S+ + + + D+V +QE A Sbjct: 37 SLRVLSYNAFLFSKTLY------PNWGQDHRAAEIPKTSFFQGNDVVVIQEAFDNGASDA 90 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGAK 134 + + T + + + K V ++ + + Sbjct: 91 LLRNAAAQYPHQTPVIGRSKSGWDATGGSYSATTPEDGGVTILSKWPIVRKEQF-VFKDA 149 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 N+ ++ +NG ++ V+ H +S S + + S+Q + + + Sbjct: 150 CGGDWFSNKGFAYAVLNVNGTRVHVVGTHAQSTDPGCSAG----EAAQMRSRQFKQMDAF 205 Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDFW-KTIDPNDSLIRFPKEKDSRCNA----N 248 + + V+AGDFN + + DS D+R N+ Sbjct: 206 LDAKNIPASEQVVVAGDFNVDGHSAEYASFLADAGLTTPDSRTGHTYSFDTRDNSIASER 265 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPIS 299 + +D+ + K ++ + S + LSDH P+ Sbjct: 266 YPDDPREDLDHVLHRTGHAKPTGWKNDVIKEQSAPWTVSSWGKKYTYTNLSDHYPVI 322 >gi|118086197|ref|XP_418838.2| PREDICTED: similar to KIAA1706 protein [Gallus gallus] Length = 558 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 29/296 (9%), Positives = 74/296 (25%), Gaps = 37/296 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+ ++ ++ +QE+ A+ K Sbjct: 253 LRVATWNLQ---------SCSIEKANNPGVREVICMTLLENSIKLLAVQELLDREALEKF 303 Query: 84 FPKNTWCIFYSTERLINH------------SKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + + + S + + L+ + Sbjct: 304 CMELNQPTLPNIRKWKGPRGCWKGVVSEKPSGQLPKGVEYCGFLWDTTAGIELKDASSQE 363 Query: 132 G-AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + R ++ + ++++HL S Sbjct: 364 NVQTNGNGRHSYPHPYIAHFKVGMNDLTLVNLHLALAPAAGDNAGKNHDSHK-----LAT 418 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + + + +I GDFN+ + ++ + P + + KN Sbjct: 419 FAQTLQETLKGEKDVIILGDFNQAPDSSDHD-----ILRKEKFHHLVPSNTFTNI-STKN 472 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302 + +D + ++ K I SDHCP+ ++ Sbjct: 473 PQGSKSLDNMWISRSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASDHCPVLAEF 528 >gi|120601181|ref|YP_965581.1| exodeoxyribonuclease III [Desulfovibrio vulgaris DP4] gi|120561410|gb|ABM27154.1| exodeoxyribonuclease III [Desulfovibrio vulgaris DP4] Length = 257 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 77/303 (25%), Gaps = 74/303 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 RLVSWN+N W + AD+V LQE K Sbjct: 4 RLVSWNVNGFRAVSSKPEW---------------NWFSTTTADVVALQE-------TKAD 41 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 P S + + ++ +AV ++ + D R R Sbjct: 42 PAQVGEEHRSPDGWHAWWLPATVKKGYSGVAVFSRHTPLDVA----YDLPDERFRGEGR- 96 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + L + +I+ + + + A+ L+ P Sbjct: 97 CLHLTFP----EFHFFNIYFPNGGMGEERLRYKMGYYEAFLEHAETLRR--------DRP 144 Query: 205 FVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 V+ GDFN +L + + F + + Sbjct: 145 IVVCGDFNTAHRPIDLARPKENETVSGFLPEERAWMDRFVATGYVDTFRHVRGDEADRYS 204 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 K IDYF + + + SDHCP+ + Sbjct: 205 WWSYKTRARARNVGWRIDYFFVSEELRGAVRDAWIE-----------MDVMGSDHCPVGL 253 Query: 301 DYD 303 + + Sbjct: 254 ELE 256 >gi|119486500|ref|ZP_01620558.1| possible endonuclease/exonuclease/phosphatase family protein [Lyngbya sp. PCC 8106] gi|119456402|gb|EAW37533.1| possible endonuclease/exonuclease/phosphatase family protein [Lyngbya sp. PCC 8106] Length = 333 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 39/329 (11%), Positives = 101/329 (30%), Gaps = 49/329 (14%) Query: 21 AQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + ++ ++N+ L K S + T + + ++ADIV QE+ Sbjct: 3 PKNFKVATFNLYNLVLPNVTYYDRNKYSTEVYAQKKTWITGQLERMNADIVGFQELFHEQ 62 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA----- 133 A+ ++ + + ++ + + + + + + + Q Y Sbjct: 63 AIKEIVQNI--KSYENAHLVVGYPASYNPEQLRPLVGLVSRFPILNHQVYEDFPPQARLE 120 Query: 134 ---KDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYS----------P 179 KD +R + ++I+ + V +HLKS + + + Sbjct: 121 INDKDIPLDKFSRPILSAQLQISDSLECTVFVVHLKSKRPILPADADKNDPVEQAKGAAR 180 Query: 180 SCSLLSQQAQWLKDWITQKKESLV-PFVIAGDFNRKINYL----------------GNND 222 + L + +A L+ + + ++ P +I GD N + Sbjct: 181 ALILRATEATALRMILMETLKNRQHPVIIMGDVNDSGLSVTTQIITGQPPWEKLPFEKKK 240 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN---------AYKFLIQE 273 + W T+ + I+ + + +D+ ++ + + Sbjct: 241 EIWDTLLYSVKDIQARQSYGDFYYTHIYNGYYQALDHILVSEEWVAQNPSRLGQVEYVSI 300 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + K SDH + Sbjct: 301 LNDHLIDETLSYEDVEKWQSDHAQVVTTI 329 >gi|39936370|ref|NP_948646.1| putative exonuclease III [Rhodopseudomonas palustris CGA009] gi|39650225|emb|CAE28748.1| putative exonuclease III [Rhodopseudomonas palustris CGA009] Length = 260 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 76/304 (25%), Gaps = 72/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 V++ ++N+N ++ +L + K DIV LQE+ + A Sbjct: 5 VKIATFNVNNVN----------------KRLPILLAWLKTARPDIVCLQELKAAEA---- 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + R ++ +AV + ++ L GA +R Sbjct: 45 ------DFPEAALRKAGYAAAWVGQKSWNGVAVLARRREIVVTRRRLPGAP---HDKQSR 95 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + I V ++ + + + + L +S Sbjct: 96 YIEAAV-----AGIIVGCLYAPNGNPQPGPKFDDKLA------WLKRLNRHAATLLKSGA 144 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGDFN + + Sbjct: 145 PVVLAGDFNVVPTPADIYPGKSWDKDALVQPAPRKLFAALLRQGWTDALRHCHPEDA-PY 203 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ID+ ++D + L + D SDH P Sbjct: 204 TFWSYWRNRFERDAGLRIDHLLLDPSLAARLKRAGV-------DRKVREAPEASDHAPAW 256 Query: 300 IDYD 303 I + Sbjct: 257 IVIE 260 >gi|302792615|ref|XP_002978073.1| hypothetical protein SELMODRAFT_108336 [Selaginella moellendorffii] gi|300154094|gb|EFJ20730.1| hypothetical protein SELMODRAFT_108336 [Selaginella moellendorffii] Length = 334 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 85/332 (25%), Gaps = 52/332 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVK---RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 R+VS+NI SL+ +S + + + +LDAD++ LQE+ + + Sbjct: 1 FRVVSYNILAQVVYVKSSLFPHSPSLCLKWKTRSEQVLSRLLSLDADLLCLQELDEFESF 60 Query: 81 AK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------------------IAVRKK 119 K + + Y + + + Sbjct: 61 YKPLLESKGYSSIYVQRSGKKRDGCGIIYKAKCFSTITTSRLMKPQPEERRNPSVYIHTR 120 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRR-----AVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 V S P S R + N ++ I + +L+ Sbjct: 121 RCIVSDFSVPEEENNRDVSDPRVRFRRNCVGIFSAFRFNHAPSNIVVIANTHLYWDPALQ 180 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + L + + I+Q+ S ++AGDFN N + + Sbjct: 181 DVKLAQAKYLLAKLLQFEKEISQEFNSNPVVLVAGDFNSTPGDRVYNYITSGRRNSGPDV 240 Query: 235 ---------------------IRFPKEKDSRCNANKNLRNKIPIDYFVMDQN--AYKFLI 271 + + N +DY + I Sbjct: 241 ELSSFKVPDLESLKVPAIPLDSLYAAAQGEPAFTNCTPDFTGTLDYIFFSPSASMRPKTI 300 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 E + SDH PI D+ Sbjct: 301 LEVPRPDAPDVKGGLPNHFHPSDHLPIGADFS 332 >gi|330888794|gb|EGH21455.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. mori str. 301020] Length = 380 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 45/325 (13%), Positives = 96/325 (29%), Gaps = 68/325 (20%) Query: 21 AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 Q +++++WNI L+ + + + + + + ++ DIV Sbjct: 69 GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYNLDEVARVIRDEQPDIVL 128 Query: 71 LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 LQ + VA ++P +T ++ +E + N S A Sbjct: 129 LQGVDDGAKNSDYEDQLALIKERVADLYPCSTQAFYWKSEFVPNPHIWGS-VGRKLATLS 187 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174 R + P+ A + + A+ + +G K+ V++ L + Sbjct: 188 RFHIDSAERVQLPVPDANIISRQFQPKDALLVSYLPLRDGGKLAVINTSLTTARHTGD-- 245 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI------ 228 +Q + + + + P++I GDFN + + Sbjct: 246 --------TAQKQIVATEKQLDKLESGGTPWLIGGDFNLLPLGQYQRLPEEQRLGYAADS 297 Query: 229 ---DPNDSLIRFPKEKDS----RCNANKNLRNKIPI-------DYFVMDQNAYKFLIQES 274 + + P +S R + N I DY + + S Sbjct: 298 ELHELWEKYPMIPDNAESSGIDRGKWLTHFPNDSRINGPDRTVDYLFYSPSLKR----VS 353 Query: 275 FSEILYNEDDIKSRGKRLSDHCPIS 299 + +SDH P+ Sbjct: 354 ARVRRDDTLL-------ISDHLPVI 371 >gi|291007593|ref|ZP_06565566.1| hypothetical protein SeryN2_23964 [Saccharopolyspora erythraea NRRL 2338] Length = 295 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 30/292 (10%), Positives = 76/292 (26%), Gaps = 34/292 (11%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + +++ ++S+NI S ++ +L + ++ +QE Sbjct: 30 PAQGERLHVMSFNIRY-----DSKAVPPSPDAWSTRRPILAELLNAESPTLLGVQEALYR 84 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + R + T P + S+ Sbjct: 85 QVKQVHADIPAHYDWIGLGREGGGRGEFMSIYYDTRRVEPLDYDHFWLSDTPNVIGSASW 144 Query: 138 SRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R + G++ ++ H S + + A ++D I Sbjct: 145 GNTVVRMVTWVRFRDLRTGREFTHVNTHFDH------------QSENSRQRSAALVRDRI 192 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 ++ +P ++ GDFN + + + + + Sbjct: 193 AGF-DAGLPVLLTGDFNTRAGDSESYRILTSGGLADGWETAAERLTPAWGTFGGYEEPVE 251 Query: 256 ---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI--SIDY 302 ID+ + + + + + G SDH P+ ++ Sbjct: 252 GGDRIDWLLANDR---------VRVLKAAINPFRKDGWFPSDHLPVHALVEL 294 >gi|288960179|ref|YP_003450519.1| exodeoxyribonuclease III [Azospirillum sp. B510] gi|288912487|dbj|BAI73975.1| exodeoxyribonuclease III [Azospirillum sp. B510] Length = 257 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 36/302 (11%), Positives = 81/302 (26%), Gaps = 71/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N + L+ + + + D+ QE+ A Sbjct: 1 MKIATWNVN----------------SAKARLPLITDWLRAVSPDVALFQEIKCETAA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ K + +D +R Sbjct: 42 -------FPRAAFEELGYHVNAVGQKAYNGVALLSKTPAEDVLTRLPGEPEDEQARY--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 VE + + ++L + + + Y + L D + Sbjct: 92 ------VEATVAGVRIASLYLPNGNPVPGEKFAYK------LRWMDRLYDHARGLLAREI 139 Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD+N + ++ + + D Sbjct: 140 PVVLGGDYNIIPEARDVFSPQAFAGDALFQPESRAKFRALLNLGLTEAYRALHDDDRAYT 199 Query: 249 KN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 N + ID+F++ A L D ++ SDH P+ + Sbjct: 200 FWDYQAGCWPRDNGLRIDHFLLSPQAADRLAGC-------RIDRGPRGLEKASDHTPVVL 252 Query: 301 DY 302 D Sbjct: 253 DL 254 >gi|228922454|ref|ZP_04085756.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228837168|gb|EEM82507.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 252 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + +Y + ADI LQE+ + Sbjct: 1 MKLISWNVNGLRAVIAKGGF--------------LEYLEESSADIFCLQEIKLQEGQIDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + ++ A+ K + + D R Sbjct: 47 NLEGYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLDIEEHDQEGRL--- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +++ ++ + + + L + Sbjct: 93 ------ITLEFEDFYMITLYTPNSKRGLERLDYRMKWEDDFRSYIKRL--------DEKK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + I + + + +A Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFSCILEEGFIDTYRYLYPDQEDAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV+ + + + + + SDHCP+ Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINTEV-----------MGSDHCPVE 247 Query: 300 IDYDF 304 + +F Sbjct: 248 LHINF 252 >gi|221198450|ref|ZP_03571496.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2M] gi|221208601|ref|ZP_03581602.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2] gi|221171592|gb|EEE04038.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2] gi|221182382|gb|EEE14783.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2M] Length = 272 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 28/302 (9%), Positives = 78/302 (25%), Gaps = 68/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + D++ LQE Sbjct: 15 MKIATWNVNSLN----------------VRKQHVLDWLAQSAVDVLCLQE---------- 48 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ + L + + Sbjct: 49 LKLPDEKFPRADLEAAGYRSWFAGQKTYNGVAILAR--DTLPFDESDVVRNIPGFEDTQQ 106 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + ++ + ++ + + + S + Y Q L W+ + + Sbjct: 107 RVIAVTID----GVRIVSAYFPNGQAVGSDKFLYK------MQWLDALHAWLRAEMQRYP 156 Query: 204 PFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRF----------PKEKDSRCNANK 249 + GD+N +D + P + + + Sbjct: 157 KLALLGDYNIAPEDRDVHDPAKWEGENLVSPQERAHFAKLIELGFVDAFRRFEQPEKTFT 216 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ D + ++ SDH P+ Sbjct: 217 WWDYRMFAFRRNAGLRIDHILLSPALAGSCTSCEV-------DRVPRTWEQPSDHTPVVA 269 Query: 301 DY 302 Sbjct: 270 VL 271 >gi|123440323|ref|XP_001310923.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas vaginalis G3] gi|121892713|gb|EAX97993.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas vaginalis G3] Length = 339 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 95/301 (31%), Gaps = 24/301 (7%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY- 77 +K++++ +N + + R+ + Y D+V L+E + Sbjct: 47 FETKKLKILDYNAFWRPTMLHMGREEWMRLRSKLLLEKIESY------DVVCLEEGFQFG 100 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + +AK F + + + ++ I + + + K + + Sbjct: 101 SDIAKNFIEGAKSLGFKYVLTSKLPPIYTHQVIDSGLIILSKFPIIESDTIRYTVFCGVD 160 Query: 138 SRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 S A + ++ ++++ K + + HL++ + + + +Q L ++ Sbjct: 161 SFAA-KGSIYAKIQLDSKNHVHLFSTHLQASY--QNGQEPTVVDVLVRQKQFDQLSAFMA 217 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-- 254 K P V+ GD N + + + + Sbjct: 218 TKVTDGYPAVLVGDLNVNSRLGDEYKSLLDHLKIPEYSCVDTLLTTHGEHPVTCGGDDDK 277 Query: 255 -----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +DY + + K ++ S+ + + +LSDH + +++ Sbjct: 278 VLPEPGDVGTHQSLDYIYLFEKHDKPQLKVSYKPEVNKMLVNGQKFFQLSDHFAVECEFE 337 Query: 304 F 304 F Sbjct: 338 F 338 >gi|312963202|ref|ZP_07777686.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens WH6] gi|311282468|gb|EFQ61065.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens WH6] Length = 362 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 45/343 (13%), Positives = 100/343 (29%), Gaps = 74/343 (21%) Query: 12 FLVPCTASVA------QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD----------YT 55 V C A A Q +++++WN+ L+ + V + + D Sbjct: 36 LPVSCVAPRAPTLLPGQALKVMTWNVQYLAGKNYVFWYDTTDGSGPDDRPTVEDMAVSLD 95 Query: 56 LLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINH 101 + + ++ DI+ LQE+ + ++P + + + + N Sbjct: 96 EVARVIRDEQPDILLLQELDENAKPSHYQDQLALLQERLVDLYPCSAQAFDWKADFVPNL 155 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWV 159 + A R + + P+ A + + A+ L +G ++ V Sbjct: 156 -HIFGSVGRKLATLSRYQIEHAERLQLPVPDANLISRQFQPKPALLLTYLPLSDGGQLAV 214 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 L+ L + S + +Q + + + + P++I GDFN Sbjct: 215 LNTRLDAGAPGRS----------AVQEQVKTTVKLLDKFEGRGTPWLIGGDFNLLPLGQF 264 Query: 220 NNDDFWKTID---PNDSLIRFPKEKDSRCNANKN-----------------LRNKIPIDY 259 D K ++ + + K N+ + +DY Sbjct: 265 LRLDAGKRGQYSPDSELHLLWDKYPMIPSNSQSSGIDREQWLTHFPNDPGLDGPDRTLDY 324 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + R+S+H P+ + Sbjct: 325 LFYSP-----------RIKRVEAKVRQEDTLRISNHLPVIARF 356 >gi|91792822|ref|YP_562473.1| exonuclease III [Shewanella denitrificans OS217] gi|91714824|gb|ABE54750.1| Exodeoxyribonuclease III [Shewanella denitrificans OS217] Length = 269 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 85/310 (27%), Gaps = 72/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ + DI+ LQE ++ Sbjct: 1 MKIISFNINGL----------------RARLHQLQALIDSHQPDIIGLQETKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K + Q +D A R Sbjct: 42 -------FPVADVEAMGYKVHYHGGKAHYGVAMLSKLEPIEVQKGFSTDEED----AQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+ + V++ + DS+ + Q L + Sbjct: 91 LIIGKFNQANGRVLTVINGYFPQG---DSIHHETKYPAKRKFYQ--DLMAHLDANHSPDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 I GD N ++ ++ + + F Sbjct: 146 DIAIIGDINISPQDLDIGIGEVNAKRWLKTGKCSFQPEEREWLACLLDWGFIDSFRLLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 +R + ID ++ + L++ + D ++ S Sbjct: 206 TREQRYSWFDYRSKGFDDNRGLRIDVILITASMTANLVES-------DVDYDLRGIEKPS 258 Query: 294 DHCPISIDYD 303 DH PI + Sbjct: 259 DHAPIWSTFS 268 >gi|329940384|ref|ZP_08289665.1| exonuclease [Streptomyces griseoaurantiacus M045] gi|329300445|gb|EGG44342.1| exonuclease [Streptomyces griseoaurantiacus M045] Length = 259 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 79/304 (25%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N T+ L + ++ D++ +QE + Sbjct: 1 MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCVQEAKTTEE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + +AV + L G R Sbjct: 41 ------QFPSEALRELGYESAVHATGRWNGVAVVSRVGLEDVVKG-LPGDPGYEGVQEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + V +++ + +D Y Q + L+ + Sbjct: 94 A-----VSATCGPVRVWSVYVPNGREVDHPHYAYK------LQWFEALRAAVAGDAAGDR 142 Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF + GD+N D ++ P+ + Sbjct: 143 PFAVLGDYNVAPTDEDVYDRAAFEGSTHVTPAERAALASLREAGLTDVVPRPLKYD-HPY 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID ++ K + D + +GK SDH P+ Sbjct: 202 TYWDYRQLCFPKNRGMRIDLVYGNEPFAKAVQDAYV-------DREERKGKGASDHAPVV 254 Query: 300 IDYD 303 +D + Sbjct: 255 VDLE 258 >gi|319404431|emb|CBI78034.1| exodeoxyribonuclease III [Bartonella rochalimae ATCC BAA-1498] Length = 260 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 89/302 (29%), Gaps = 66/302 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNI + + L ++ K D+V LQE+ S + Sbjct: 1 MKIATWNIAG----------------IKARHETLCKWLKQNQPDVVCLQEIKSVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 T + + +A+ K V +L + + R Sbjct: 41 ------NFPRDTIENLGYHIETHGQKSFNGVAILSKTVPDEV----ILQLPGNNNDMQAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + N I V ++L + ++S + Y + L Sbjct: 91 Y-IETVYSTNTGSIRVASLYLPNGNPINSEKYLYKIE------WMKRLYTHAKSLLAYEE 143 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++AGD+N +L ++ I D+ + Sbjct: 144 PLILAGDYNVIPTPLDAKNPQEWSNDALFLPQIRQIFQCITHLGFYDAIRNVTDAPSFSF 203 Query: 249 KNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + N I ID+ ++ A L I ++ SDH PI I+ Sbjct: 204 WDFQANAWKKNNGIRIDHLLLSPEAADQL-------ICAYSQTEARGYQKPSDHVPIWIE 256 Query: 302 YD 303 + Sbjct: 257 LN 258 >gi|251773491|gb|EES54039.1| Exodeoxyribonuclease III [Leptospirillum ferrodiazotrophum] Length = 259 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 79/303 (26%), Gaps = 72/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+L + + DI+ LQE ++ Sbjct: 1 MRVATWNVNSLP----------------VRLPQVLDWIDRKSPDILCLQETKVPDS---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + +A+ + G D R Sbjct: 41 ------RFPAEPFRERGYDLLFRGQPTYNGVAILSRRPLSDPLR-DFPGEPDPECRL--- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + ++++ + LD+ + Y + L + ++ Sbjct: 91 ------LAATAGPLRLFNLYVPNGQDLDTPKYRYKLA------WLDRLAALLDDERRRHP 138 Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDP----------NDSLIRFPKEKDSRCNANK 249 V+ GDFN D + P N + Sbjct: 139 FLVLTGDFNIVPEDRDAYDPVALRGQIFLSPPEREALARIMNLGFRDAFRALHPDPGHFS 198 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID +M + L D + +R SDH P+ + Sbjct: 199 WWDYRQGMFRRNMGLRIDLILMASSLEPALTSAEI-------DREVRKNERPSDHAPVFV 251 Query: 301 DYD 303 D+D Sbjct: 252 DFD 254 >gi|333030431|ref|ZP_08458492.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM 18011] gi|332741028|gb|EGJ71510.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM 18011] Length = 343 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 45/348 (12%), Positives = 97/348 (27%), Gaps = 56/348 (16%) Query: 2 IRKYVLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSV-----------KR 49 ++ ++ A +F ++ WN+ L + + SL ++ + Sbjct: 1 MKHFLFAFLFCFTSPVFCQTNLPFNILFWNVENLFDCKHDSLKNDTDFLPESLKHWNTYK 60 Query: 50 TTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105 + T + + I+ L E+ + + + + K + Sbjct: 61 YRNKLTAIAKGVVAAGEWSSPAIIGLCEVENDSVLYDLTQKTNLRNIGYRYVVTQSE--- 117 Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHL 164 I A+ + R+ + L K R + + V + + + H Sbjct: 118 DARGIDVALLYLPEYFRLTKHE-SLKVGKLKIGNRLTRDILHVEGVLLTSDTLDLFVAHF 176 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNND 222 S S Q A+ L++ + VI GDFN + + Sbjct: 177 PSRFGG------RKYSEPNRIQVAKVLRNAVDSLFSIREKANIVIMGDFNDYPDNRCVTE 230 Query: 223 DFW-----KTIDPNDSLIRFPKEKDSRCN-ANKNLRNKIPIDYFVMDQNAY----KFLIQ 272 K I + ++++ K +D+F++ N F Sbjct: 231 ILNATAPTKEISKHQLYHLLARKREKYTWGTYKYKNEWGVLDHFIVSGNLLDHTQDFYTS 290 Query: 273 ESFSEI-----------------LYNEDDIKSRGKRLSDHCPISIDYD 303 E ++I + + SDH PI + Sbjct: 291 EQQTDILKLGFLLIEDKKYGGSKPFRTYNGMQYQAGYSDHLPIRSTFT 338 >gi|240140848|ref|YP_002965328.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP endonuclease VI) [Methylobacterium extorquens AM1] gi|240010825|gb|ACS42051.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP endonuclease VI) [Methylobacterium extorquens AM1] Length = 269 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 28/306 (9%), Positives = 73/306 (23%), Gaps = 66/306 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + +WNIN + ++ + D++ LQE + Sbjct: 3 LTVTTWNIN----------------SVRLRIESVLRFLREAQPDVLCLQETKCP---DDL 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + + +A+ + + + D+ R Sbjct: 44 FPLKAFKG------SGYENIVFAGQKGYNGVAIISRFPLLTRDVMSFCERPDA------R 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +L G ++ D +P + L+ W ++ Sbjct: 92 HISAVLGPEAGPAAGIVLHDFYVPAGGDMPHRDLNPKFAHKLDFLSELRVWGGRRVSG-- 149 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N + + + Sbjct: 150 PAILVGDLNVAPLEHDVWSHKQLLDVVSHTPVETEALETLRGEAGWIDAARLLTPEPEKI 209 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + + ++ SDH P Sbjct: 210 YTWWSYRSPNWELANKGRRLDHTWVSPDLAG-------TVRRVAVFREARGWEKPSDHVP 262 Query: 298 ISIDYD 303 +++ + Sbjct: 263 VTLTLE 268 >gi|149199705|ref|ZP_01876737.1| hypothetical protein LNTAR_25155 [Lentisphaera araneosa HTCC2155] gi|149137222|gb|EDM25643.1| hypothetical protein LNTAR_25155 [Lentisphaera araneosa HTCC2155] Length = 275 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 93/309 (30%), Gaps = 53/309 (17%) Query: 2 IRKYVLALVFFLVPCTASVAQ------KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55 I+ L + + + A VR+ S+N+ ++ Sbjct: 4 IKLLALTFAYLCIFTSNLTASEPDKSLTVRVASYNVEFG---------------KSATPE 48 Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + + K + DI+ E + A+V + ++ D + I Sbjct: 49 QIGEMFKPYNLDIIGFDEAPDGDWTARVGKVLGMKYSFV-----GKISSANHKDKYKTIL 103 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 R R ++ + D AV + +I+G I +H+ S Sbjct: 104 SRTPLERKVEHDLSV----DRRRCWNPASAVRAVTKIDGVAIAFYSLHICST-------- 151 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 + + + + + KE+ ++ GDFN I N + Sbjct: 152 ---RDREKIGHAYKLVGEVLR--KETTERVIVVGDFNNNIGDAAMNTFKKAGFKATWKDL 206 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + K+ NA +N ID+ + +A + E+ LSDH Sbjct: 207 KIDVSKEYTYNAFDPKKNLGVIDHILCKTSAGAKVTAGGIIELKKP----------LSDH 256 Query: 296 CPISIDYDF 304 PI + F Sbjct: 257 KPIWAEIIF 265 >gi|221194898|ref|ZP_03567954.1| exodeoxyribonuclease III [Atopobium rimae ATCC 49626] gi|221184801|gb|EEE17192.1| exodeoxyribonuclease III [Atopobium rimae ATCC 49626] Length = 281 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 36/313 (11%), Positives = 76/313 (24%), Gaps = 76/313 (24%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + ++ + SWN+N L + + +DADI LQE Sbjct: 20 SSNTADTKEYKFASWNVNGLRAVLKKDPSF-------------TEIFETIDADIFALQET 66 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + ++ AV + + Sbjct: 67 KLQEGQVDL-----------DIPSYFQTWNYAERKGYSGTAVFSREEPLQVIRQIGSPVA 115 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D+ R + + + W +D++ + + + L Sbjct: 116 DNEGR---------VCALEFDRFWFVDVYTPNSKEQLARLDERLVWDERYRDFIAEL--- 163 Query: 195 ITQKKESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPK 239 + P + GDFN + + + F Sbjct: 164 -----SAQKPLITCGDFNVAHTEIDLKNPSSNHKNAGFSDEERESFTKLLDAGFTDTFRY 218 Query: 240 EKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 A + IDYF++ + + + +Y Sbjct: 219 RHPDVTGAYSWWSYRFNARKNNAGWRIDYFLVSNRIAQQITGAAILNEVY---------- 268 Query: 291 RLSDHCPISIDYD 303 SDHCP+ + + Sbjct: 269 -GSDHCPVELTIE 280 >gi|194334185|ref|YP_002016045.1| endonuclease/exonuclease/phosphatase [Prosthecochloris aestuarii DSM 271] gi|194312003|gb|ACF46398.1| Endonuclease/exonuclease/phosphatase [Prosthecochloris aestuarii DSM 271] Length = 325 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 42/333 (12%), Positives = 83/333 (24%), Gaps = 63/333 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNL 64 TA+ ++ + WN+ L + L + + KR Y L K Sbjct: 7 ATAAKENQLLFMWWNVENLFDTIDDPLTNDNEFTPEGSRHWTPKRLALKYLRLAHIIKLA 66 Query: 65 D--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 DI+ L E+ + + I + I A+A Sbjct: 67 GAEKSMNGYPDILALAEVENKQVFRTLLS-----FLPDHHYHIVYHNSRDPRGIDIALAY 121 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 +++ L + R + +++ H S Sbjct: 122 NSQSLHHLASRQVKIPLSG----KATRDISLHEFTTVNTRFFLIVNHWPSRSLD------ 171 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVP---FVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 L QA I + P ++AGDFN + + ++I+ Sbjct: 172 -RKWSEPLRLQAAESARAIVDSLLAQDPASNIIVAGDFNDEPDDPSIRQ-ILRSINDRKK 229 Query: 234 LIRFPKEKDSRCN-------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY------ 280 ++ C + +D ++ ++ S + Sbjct: 230 VLGPSPLYLYNCWAQSDVPGSYHYRNRWNRLDQIMVSRSLLDGRRGLQISNSSFSCFRPE 289 Query: 281 -----------NEDDIKSRGKRLSDHCPISIDY 302 SDH P+ +D Sbjct: 290 QMQEPGSGIPSRTWKGIRHRGGYSDHYPLLLDI 322 >gi|332975843|gb|EGK12721.1| hypothetical protein HMPREF9374_1315 [Desmospora sp. 8437] Length = 253 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 30/282 (10%), Positives = 71/282 (25%), Gaps = 46/282 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 V+L+ +NI +G D + + + D+V L E+ + Sbjct: 3 VKLMGYNIRHGLGCDG-----------RLDLERIARVIEREAPDLVGLNEVDVR-FHRRS 50 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + + A + + + + + Sbjct: 51 AFTDQLGWLAERLGMESLFGPAIRHTEVAGETAGYGNGLLFKGEVHHVRNRRVERRGEEP 110 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + G+ + + + + QQ L + + ++ Sbjct: 111 RALLVAEWIPPGETVSIRVVVTHMGLNP-----------WMRRQQVDLL---LEECRDPA 156 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 P V GD+N L+ E + + IDY Sbjct: 157 QPVVALGDWNVTPRRPAVTRL-------APFLLDTLGESGVSASTYPCPSPRKRIDYIFC 209 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ ++ + SDH P+ ++ Sbjct: 210 SRHFHRETASVVVTPGC------------PSDHLPVLSVLNW 239 >gi|108759756|ref|YP_628914.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] gi|108463636|gb|ABF88821.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] Length = 360 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 41/328 (12%), Positives = 95/328 (28%), Gaps = 52/328 (15%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD--ADIVFLQ 72 +R+V++N+ KR + +LD D+V LQ Sbjct: 27 SALPMSPSPLRIVTYNVRYFGHMLRGLASTVGPKR------RVAAALASLDPLPDVVCLQ 80 Query: 73 EMGSYNAVAKVFPKNTWCI-----------------------FYSTERLINHSKRDSNND 109 E+ + + + + + + + +H K + Sbjct: 81 EVETSSLRSNIADRPKQPGETQLTAFMGRMVETFDRLGREMPYEAFYFRAHHYKLREVSL 140 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFS--------RAGNRRAVELLV--EINGKKIWV 159 T +AV ++ ++ + + R +R + + + + Sbjct: 141 YTTGLAVLVNTRKLEVATHNVGAPQAITHHHVQRLKDRKQSRICAHMRLLRREDRHPFHI 200 Query: 160 LDIHLKSFCFLDSLENTYSPSC---SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216 + HL +A+ L +++ Q P+++ GDFN Sbjct: 201 FNTHLSLPTPFAREFWATRDKMGGGVNQLHEARKLTEFM-QGLTGDEPYIVCGDFNSPPA 259 Query: 217 YLGNNDDF--WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 + ++ + L ++ +D+ ++L Sbjct: 260 SPVYRYLTTDGRLTCAQAAVGQIDPNVSRGFPTAGFLHMRMHLDHVF-SGAGVRWLD--- 315 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ D++SR LSDH PI + Sbjct: 316 -TQETSPFGDLRSRFHGLSDHMPIVARF 342 >gi|30021833|ref|NP_833464.1| exodeoxyribonuclease III [Bacillus cereus ATCC 14579] gi|229129016|ref|ZP_04257989.1| Exodeoxyribonuclease [Bacillus cereus BDRD-Cer4] gi|29897389|gb|AAP10665.1| Exodeoxyribonuclease III [Bacillus cereus ATCC 14579] gi|228654253|gb|EEL10118.1| Exodeoxyribonuclease [Bacillus cereus BDRD-Cer4] Length = 252 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + +Y + ADI LQE+ + Sbjct: 1 MKLISWNVNGLRAVIAKGGF--------------LEYLEESSADIFCLQEIKLQEGQIDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + ++ A+ K + + D R Sbjct: 47 NLEGYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRL--- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +++ ++ + + + L + Sbjct: 93 ------ITLEFEDFYMITLYTPNSKRGLERLDYRMKWEDDFRSYIKRL--------DEKK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + I + + ++ A Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRENPGFSDEEREKFSCILEEGFIDTYRYLYPNQEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV+ + + + + + SDHCP+ Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSEGMKDQITEAKINSEV-----------MGSDHCPVE 247 Query: 300 IDYDF 304 + +F Sbjct: 248 LHINF 252 >gi|315148697|gb|EFT92713.1| exodeoxyribonuclease III [Enterococcus faecalis TX4244] Length = 251 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + LDAD LQE A Sbjct: 1 MKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S A++VR R Sbjct: 45 LELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------ESHDQEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ + + + + ++ + + Sbjct: 91 -----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK- 137 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F Sbjct: 138 PVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ ++ + L+ + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246 Query: 300 IDYDF 304 + DF Sbjct: 247 VVLDF 251 >gi|206579947|ref|YP_002239572.1| endonuclease/exonuclease/phosphatase family protein [Klebsiella pneumoniae 342] gi|288936416|ref|YP_003440475.1| endonuclease/exonuclease/phosphatase [Klebsiella variicola At-22] gi|290510529|ref|ZP_06549899.1| endonuclease/exonuclease/phosphatase [Klebsiella sp. 1_1_55] gi|206569005|gb|ACI10781.1| endonuclease/exonuclease/phosphatase family protein [Klebsiella pneumoniae 342] gi|288891125|gb|ADC59443.1| Endonuclease/exonuclease/phosphatase [Klebsiella variicola At-22] gi|289777245|gb|EFD85243.1| endonuclease/exonuclease/phosphatase [Klebsiella sp. 1_1_55] Length = 253 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 39/291 (13%), Positives = 80/291 (27%), Gaps = 49/291 (16%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + + +++ N + LR +++ ADIV LQE+ Sbjct: 4 PTSGFSLNVLTINTHKGFTAFNRRF----------ILPELRDAVRSVSADIVCLQEVMGA 53 Query: 78 NAVAKV----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + V + +P T F + +++ + H AV + Sbjct: 54 HEVHPLHIENWPDTTHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRFPIE-----YYE 108 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 S R + + + + I + D Q L Sbjct: 109 NRDISVGNGEKRGLLYCRIVPPESGVTIHVICVHLGLRADQ-----------RQAQLTML 157 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 +W+ + P V+AGDFN ++ F + + Sbjct: 158 AEWVNT-LPAGEPVVVAGDFNDWRQQANQPLKAQAGLEE-----IFTRARGRPARTFPVS 211 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + + LSDH P+S++ Sbjct: 212 FPLLRLDRIYVKNAHASHPKALALKQ-----------WRHLSDHAPLSVEI 251 >gi|188994231|ref|YP_001928483.1| exodeoxyribonuclease III [Porphyromonas gingivalis ATCC 33277] gi|188593911|dbj|BAG32886.1| exodeoxyribonuclease III [Porphyromonas gingivalis ATCC 33277] Length = 254 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 91/304 (29%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++S+N+N L + L + + + D++ LQE M + Sbjct: 1 MKIISYNVNGLRA---------------AMKKDLIGWLREENPDVLCLQETKMQNDQFEK 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F + + + + + + +A+ K+ Q + G A Sbjct: 46 EEFEALGYRSYLFSAQKKGY----------SGVAIITKH----QPDHIEYGMGMEEYDAE 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + + ++ ++ S D + + + + ++ + ++S Sbjct: 92 GRF-----IRADFGDLSIVSVYHPSGTSGDERQ-------AFKMVWLEHFQSYVNELRKS 139 Query: 202 LVPFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD+N + +D W + D + + Sbjct: 140 RPNLILCGDYNICHEPIDIHDPIRNAKNSGFLPEEREWMSRFLADGYVDTFRHTHPELVL 199 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY ++ N + + SDHCPI Sbjct: 200 YSWWSYRFQARSRNKGWRIDYCMVTNNLADRIKGAYILNEAVH-----------SDHCPI 248 Query: 299 SIDY 302 ++ Sbjct: 249 VLEI 252 >gi|83942866|ref|ZP_00955326.1| endonuclease/exonuclease/phosphatase family protein [Sulfitobacter sp. EE-36] gi|83845874|gb|EAP83751.1| endonuclease/exonuclease/phosphatase family protein [Sulfitobacter sp. EE-36] Length = 341 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 42/336 (12%), Positives = 88/336 (26%), Gaps = 56/336 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSD--------YTLLRQYAKNLDADIVFLQEMG 75 +R+ ++N+ + ++ L + +DAD V + E Sbjct: 1 MRIATYNVEWFTGLFDDEDQLLLDDGWSARHNITRAQQAQALGTVFRAMDADAVMVIEAP 60 Query: 76 SYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-------- 126 + V + + ++ A+ + + Sbjct: 61 DQSRKRGTVAALERFAAHFDLRTRKAVIGFANDTQQEIALLLDPDRLSASHAPGGSVGQG 120 Query: 127 ---------SYPLLGAKDSFSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENT 176 L ++ +EL + G ++ HLKS + Sbjct: 121 DAPRFDGTLDIDLDIDAREDHVVFSKPPLELDIVTCEGVAFHMIGAHLKSKAPHGAKTPQ 180 Query: 177 YS-----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK----- 226 + + QA WL+ I + + P ++ GD N D F + Sbjct: 181 DALRIGIANRRKQLAQAIWLRRRIDARLDDGTPLMVLGDLNDGPGLDSFEDLFGRSSVEI 240 Query: 227 ---------TIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQ 272 +DP+ + + + +DY ++ Sbjct: 241 VMGHRQDRALVDPHAIRALGQRIGAMPTTSRFWIAPEKRYLQALLDYIMISPALTAHRPH 300 Query: 273 ESFSEILYNEDDIKSRGKR-----LSDHCPISIDYD 303 L + + R SDH P++ID D Sbjct: 301 WRIWHPLDDPECWGDAALRDALITASDHFPVTIDLD 336 >gi|260754011|ref|YP_003226904.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553374|gb|ACV76320.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 261 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 86/304 (28%), Gaps = 73/304 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 ++ S+N+N ++ + L ++ + DI+ LQE+ S +A Sbjct: 3 KIASFNVNGIN----------------ARLPRLIEWLEKFQPDILCLQELKSDDA----- 41 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + + +A+ K Q D +R Sbjct: 42 -----RFPQEEIEKTGYYCLYHGQKAYNGVAILSK----EQPKLIRTSLPDDPDPTQSRY 92 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 +E + V ++L + L+S + Y + + + P Sbjct: 93 -----IEAEIDNLTVASLYLPNGNPLNSPKYDYKLA------WFKAFLAHARSLWQQEKP 141 Query: 205 FVIAGDFNRKINYL-----------------GNNDDFWKTIDPNDSLIRFPKEKDS---- 243 ++AGD+N ++ + +W+ + S Sbjct: 142 VILAGDYNVVPSFDIKDIRNAAALADNALLAPESLFYWRQLLAMGWTDSLRVRHLSEPLY 201 Query: 244 RCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID+ ++ + L D ++ SDH P+ Sbjct: 202 SFWDYQAQSWPRDDGMRIDHILLTPDLADGLTDSGV-------DRQMRGQEKASDHAPVW 254 Query: 300 IDYD 303 I+ D Sbjct: 255 IEID 258 >gi|297846518|ref|XP_002891140.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis lyrata subsp. lyrata] gi|297336982|gb|EFH67399.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis lyrata subsp. lyrata] Length = 419 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 46/325 (14%), Positives = 90/325 (27%), Gaps = 46/325 (14%) Query: 23 KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 K RLVS+NI + + + + + + KNL AD LQE+ Y++ Sbjct: 93 KFRLVSYNILAQVYVKSALLPHSPPACLKWKARSHAILSVLKNLKADFFCLQEVDEYDSF 152 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + ++ +R + + A R+ DS S + Sbjct: 153 YRNNMESLGYSGIYIQRTGQRKRDGCAIFYKPSCAELVTKERIEYNDLVDSIKADSVSCS 212 Query: 141 GNRR----------------------------AVELLVEINGKKIWVLDIHLKSFCFLDS 172 + + IN ++ + + Sbjct: 213 EQKIETSNEGKDSRKDSRDLNDPLVRLKRDCVGIMAAFRINKPFHHIVIVANTHLYWDPE 272 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-------- 224 L + L + K I+ + E ++AGDFN + N Sbjct: 273 LADVKRAQAKYLLSRLAQFKTLISDEFECTPSLLLAGDFNSIPGDMVYNYLVSGNAKPAE 332 Query: 225 --WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY-- 280 + P + + N +DY + + F+ S ++ Sbjct: 333 TTEEEEAPVPLSSVYEVTRGEPKFTNCTPGFTNTLDYIFISPS--DFIKPVSILQLPEPD 390 Query: 281 --NEDDIKSRGKRLSDHCPISIDYD 303 + SDH PI +++ Sbjct: 391 SPDIVGFLPNHHHPSDHLPIGAEFE 415 >gi|294815857|ref|ZP_06774500.1| Exonuclease [Streptomyces clavuligerus ATCC 27064] gi|294328456|gb|EFG10099.1| Exonuclease [Streptomyces clavuligerus ATCC 27064] Length = 269 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 74/305 (24%), Gaps = 70/305 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+ +WN+N T+ L + ++ D++ +QE Sbjct: 10 SMRIATWNVN----------------SVTARLPRLLAWLESSGTDVLCIQETKCAEE--- 50 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 R I + + +A+ + L G Sbjct: 51 -------QFPAEELREIGYESAIHADGRWNGVALVSRVGLDEVVKG-LPGGPAYDGAQEP 102 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + + +++ + + Y + LK+ + Sbjct: 103 RA-----ISATCGPVRLWSVYVPNGREVTHDHYAYK------LEWLAALKEAVAADAAGP 151 Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 PF + GD+N + P+ + Sbjct: 152 RPFAVLGDYNIAPADEDVWDRAAFEGSTHVTEPERAALAALRETGLSDVVPRPLKYD-HP 210 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID + + D + +GK SDH P+ Sbjct: 211 FTYWDYRQLCFPKNRGMRIDLVYGNGPFAGAVKDSYV-------DREERKGKGASDHAPV 263 Query: 299 SIDYD 303 +D D Sbjct: 264 VVDLD 268 >gi|218780993|ref|YP_002432311.1| endonuclease/exonuclease/phosphatase [Desulfatibacillum alkenivorans AK-01] gi|218762377|gb|ACL04843.1| Endonuclease/exonuclease/phosphatase [Desulfatibacillum alkenivorans AK-01] Length = 250 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 37/283 (13%), Positives = 79/283 (27%), Gaps = 36/283 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++ N+ ++G W+ + + DI+ +QE + A Sbjct: 2 DSFSAMTANLRFGRARDGEHGWEFRK-------DAFMKLFRTYKPDILAVQEANDFQAEH 54 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + ++ R SN KK+ + P Sbjct: 55 LIQRMEDYD--HAGFRKNAPDFWQSNILFFKKPWSLKKHRHIFYSDTPD-EESKWKDSKW 111 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R+ + +E GK + +D H + + A+ L + + Sbjct: 112 PRQGTLVQLEKGGKTLACVDTHYDFKPEVQARS-------------ARLLLNILEDFAP- 157 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 +P ++ GDFN K + K + F K + + ID+ + Sbjct: 158 GLPTLVMGDFNAKPDSS-----CRKEFEQGGFKDPFDKRFGGTHHGFTGKDDGRRIDWIL 212 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + G SDH + ++ + Sbjct: 213 YRGGIEP-------VKASRKIIRGRFGGVYPSDHFQVYCEFTW 248 >gi|89072881|ref|ZP_01159438.1| endonuclease/exonuclease/phosphatase family protein [Photobacterium sp. SKA34] gi|89051403|gb|EAR56858.1| endonuclease/exonuclease/phosphatase family protein [Photobacterium sp. SKA34] Length = 351 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 102/342 (29%), Gaps = 54/342 (15%) Query: 14 VPCTASVAQKVRLVSWNI-NTLSEQEGVSLWKN--SVKRTTSDYTLLRQYAKNLDADIVF 70 P ++++ S+N+ N L+ ++N S ++ L DI+ Sbjct: 9 FPLVPIAQSEIKIASFNLLNYLAPPNAYYDFENIYSYEQWHKKQHWLTSILDAQQPDIIG 68 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE+ S + + + + ++ AIA + V+ Sbjct: 69 FQEVFSADELKALLRDIGYP-HFAVVDKPKVEGDFIYRSPVVAIASKFPITEVIAVEADN 127 Query: 131 LGAKDSFS--RAGNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTYSP------ 179 A+ + +R+ + V+I +V + K F D L T + Sbjct: 128 EAAQLMGWAEFSFSRKPLRATVDIPHIGATDCYVTHLKSKRSLFDDPLPETIAKTGSALS 187 Query: 180 -----------SCSLLSQQAQWLK-DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 S L +A L+ + +++++ P V+ GD+N I+ + Sbjct: 188 SFLGQRLGSWGSSMLRGTEAALLQLAMVKRREQTSNPMVLCGDYNDVISSSCLEELTASR 247 Query: 228 -----------------IDPNDSLIRFPKEKDSRCNA--NKNLRNKIPIDYFVMDQNAYK 268 + L +D + +DY ++ Q Sbjct: 248 VYGMSESDTERLINFYCLYDGWQLYTQINPQDEETRPATHYYNGKGSVLDYILLSQEFNA 307 Query: 269 FLIQESFSEILYNEDD------IKSRGKRLSDHC-PISIDYD 303 + F Y+ +D +DH PI + Sbjct: 308 RYLGSLFEVSHYHTEDKHLVNSSFDIDGYSTDHAIPI-VTLS 348 >gi|149191818|ref|ZP_01870055.1| exonuclease III [Vibrio shilonii AK1] gi|148834336|gb|EDL51336.1| exonuclease III [Vibrio shilonii AK1] Length = 268 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 85/306 (27%), Gaps = 72/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ D++ LQE+ ++ Sbjct: 1 MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K + Q +D R Sbjct: 42 -------FPVEAVEAMGYKVYFHGQKAHYGVAMLCKQEPISVQKGFPTDNEDHQK----R 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ G K+ VL+ F ++ + L ++ + + Sbjct: 91 MIMATFEDVKGDKVTVLN-----GYFPQGDNISHETKFPYKEAFYKDLMTYLNEHHSNDE 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ ++ +T+ + F + Sbjct: 146 KLIVMGDINISPIDLDIGIGEPNRKRWLKTGKCSFQPIEREWLQTLLDWGFVDTFRQLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + + ID + ++ + + D ++ S Sbjct: 206 NVDDQFSWFDYRSRGFDDNRGLRIDVVLATKSLAETCSEAGI-------DYELRGIEKPS 258 Query: 294 DHCPIS 299 DH PI Sbjct: 259 DHAPIW 264 >gi|67516221|ref|XP_657996.1| hypothetical protein AN0392.2 [Aspergillus nidulans FGSC A4] gi|40747335|gb|EAA66491.1| hypothetical protein AN0392.2 [Aspergillus nidulans FGSC A4] gi|259489365|tpe|CBF89576.1| TPA: endonuclease/exonuclease/phosphatase family protein (AFU_orthologue; AFUA_1G01540) [Aspergillus nidulans FGSC A4] Length = 419 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 99/311 (31%), Gaps = 32/311 (10%) Query: 3 RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 K + L+ + A+ ++S+N+ L E + T + L+ + Sbjct: 1 MKSTITLLSLVPSTLAATTGSFNILSFNVAGLPEIFNSNDVPGDK---TENTELIGERFA 57 Query: 63 NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 DI+ +QE +Y+A + R + ++T + Sbjct: 58 EYSYDIIHVQEDFNYHAA-------LYSTDTHPYRTSTSGGVPFGSGLNT--LSNYDWID 108 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 + + F + + V++ ++V +L + + S Sbjct: 109 FERVKWDTCSDASGFDCWTPKGFTVMRVKLEDG-VYVDCYNLHADAGSEE------EDVS 161 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKE 240 + S Q + D+I+ ++ GD N + G N ++T + N + Sbjct: 162 IRSANLQQVSDYISANSI-GNAVLVYGDTNARYTSSGENIRTFETQNGMVNPWVELVLDG 220 Query: 241 KDSR-------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + C + +D + L S+ Y ++ + G LS Sbjct: 221 VEPTEGTDAVVCENPTTTQTCETVDKIFYRGSPALALQALSW---AYEDEKFLNNGSILS 277 Query: 294 DHCPISIDYDF 304 DH PI+ + + Sbjct: 278 DHNPITSRFTW 288 >gi|220933285|ref|YP_002512184.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. HL-EbGR7] gi|219994595|gb|ACL71197.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. HL-EbGR7] Length = 294 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 80/303 (26%), Gaps = 56/303 (18%) Query: 9 LVFFLVPCTASVAQKVRLVSWNINTL-----SEQEGVSLWKNSVKRTTS--DYTLLRQYA 61 L+ Q++R++S+N+ + WK+ + + + ++ Sbjct: 25 LLEVGPSTPPLAGQRIRVLSYNVQVGISATRFHHYFTNSWKHVLPYQGRLGNLDSVARFI 84 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 D+V LQE+ + + ++ + S S + + + Sbjct: 85 SGF--DLVGLQELDAGSLRSQFINLAQYLSERSDLP-----YWYSQTNRNLGKIAQHSLG 137 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSP 179 + + + S R A+E E + ++ +HL Sbjct: 138 LLSRYHPHTVVEHRLPSVIPGRGALEAHFGAEQGSGSLVIMLVHLSLGKRD--------- 188 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 Q + +I + V+ GD N + +T Sbjct: 189 ----RRLQME----YIAEVLRDHEHVVVMGDMNCSCHADEVKRLVRQTRLQEPLAAH--- 237 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + R D+ ++ + SDH P+ Sbjct: 238 ------KTYPSWRPAHAFDHILVTPGLGVEQV--------------HVYNVNYSDHLPVG 277 Query: 300 IDY 302 ++ Sbjct: 278 VEI 280 >gi|318081282|ref|ZP_07988614.1| exodeoxyribonuclease III [Streptomyces sp. SA3_actF] Length = 259 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 72/304 (23%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N T+ L + ++ D++ +QE + Sbjct: 1 MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCVQETKTTAE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + +AV + S L R Sbjct: 41 ------GFPTEALREAGYESAVNATGRWNGVAVISRAGLDDVVSG-LPDQPAYDGVMEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + + Y + + L+ + Sbjct: 94 A-----LGATCGPVRVWSVYVPNGREVGHPHYAYK------LEWLEALRAAVAGDAAGTR 142 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF + GD+N + P+ Sbjct: 143 PFAVMGDYNVAPGDEDVYDPAVFEGLTHVTPPERAALAELRATGLGDLVPRPLKYD-RPY 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID + D + +GK SDH P+ Sbjct: 202 TYWDYRQLAFPKNRGMRIDLVYANAAFRSAAKDAYV-------DREERKGKGASDHAPVV 254 Query: 300 IDYD 303 +D D Sbjct: 255 VDLD 258 >gi|257482179|ref|ZP_05636220.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 380 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 45/325 (13%), Positives = 96/325 (29%), Gaps = 68/325 (20%) Query: 21 AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 Q +++++WNI L+ + + + + + + ++ DIV Sbjct: 69 GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYNLDEVARVIRDEQPDIVL 128 Query: 71 LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 LQ + VA ++P +T ++ +E + N S A Sbjct: 129 LQGVDDGAKNSDYEDQLALIKERVADLYPCSTQAFYWKSEFVPNPHIWGS-VGRKLATLS 187 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174 R + P+ A + + A+ + +G K+ V++ L + Sbjct: 188 RFHIDSAERVQLPVPDANIISRQFQPKDALLVSYLPLRDGGKLAVINTSLTTARHTGD-- 245 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI------ 228 +Q + + + + P++I GDFN + + Sbjct: 246 --------TAQKQVVATEKQLDKLESGGTPWLIGGDFNLLPLGQYQRLPEEQRLGYAADS 297 Query: 229 ---DPNDSLIRFPKEKDS----RCNANKNLRNKIPI-------DYFVMDQNAYKFLIQES 274 + + P +S R + N I DY + + S Sbjct: 298 ELHELWEKYPMIPDNAESSGIDRGKWLTHFPNDSRINGPDRTVDYLFYSPSLKR----VS 353 Query: 275 FSEILYNEDDIKSRGKRLSDHCPIS 299 + +SDH P+ Sbjct: 354 ARVRRDDTLL-------ISDHLPVI 371 >gi|256616763|ref|ZP_05473609.1| exonuclease III [Enterococcus faecalis ATCC 4200] gi|256596290|gb|EEU15466.1| exonuclease III [Enterococcus faecalis ATCC 4200] Length = 251 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 78/305 (25%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWNIN L + LDAD LQE A Sbjct: 1 MKCISWNINGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S A++VR R Sbjct: 45 LELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------EAHDQEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ + + + + ++ + + Sbjct: 91 -----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK- 137 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F Sbjct: 138 PVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ ++ + L+ + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246 Query: 300 IDYDF 304 + DF Sbjct: 247 VVLDF 251 >gi|330993300|ref|ZP_08317236.1| Exodeoxyribonuclease III [Gluconacetobacter sp. SXCC-1] gi|329759702|gb|EGG76210.1| Exodeoxyribonuclease III [Gluconacetobacter sp. SXCC-1] Length = 261 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 31/302 (10%), Positives = 74/302 (24%), Gaps = 70/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LV+WN+N + Y D++ LQE+ + Sbjct: 2 MKLVTWNVN----------------SIRQRCDHVLDYLAREQPDVLALQEIKCATDL--- 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + +A+ + + Sbjct: 43 -------FPADAFRKAGYECTAVGQKSYNGVAMLARQPFTVTH------TALPGWETTPP 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +A + + G + V +++L + S + + L ++ Sbjct: 90 QARYVEIRTGG--LVVGNLYLPNGNSGGSAGYDSKLAF------MEALALHARGLLQAGQ 141 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 FV+ GD+N + ++ + + Sbjct: 142 DFVLMGDYNVCPTDEDCAPGALPPTDALVRPESRAAFRRLLWLGLTDALRALHPAGRFYT 201 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ID+ ++ + L + + + SDH P++I Sbjct: 202 FWDYQAAAWQRDSGLRIDHALLSPRVAERL-------LTALPARDERGKPQPSDHVPLAI 254 Query: 301 DY 302 Sbjct: 255 TL 256 >gi|326335303|ref|ZP_08201498.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692574|gb|EGD34518.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 343 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 81/311 (26%), Gaps = 63/311 (20%) Query: 8 ALVFFLVPC----TASVAQKV------RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 L F +P + ++S+N+ L+ + + Sbjct: 76 VLFFLGLPFMHRFVQFSQNTLPPKGQPSIMSFNVRLLNHYKWSKDLTLR--------EKI 127 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + + +IV LQE + FP + F + A+ Sbjct: 128 ISFLREEHPNIVALQEFYKKE--NESFPFYKYKRFIYKNE-----------NDKIGQAIL 174 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + S ++ V + + + + +H +SF D+ Sbjct: 175 SDYPIIGSGSLNFPHTGNN--------GVYADIVLGKDTLRLYSLHFESFHIDDTQITQE 226 Query: 178 SPS------CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 + + Q ++ + S P ++ GDFN ++ I Sbjct: 227 NSKKILLSLPKRFAIQQSQVELFDAHADTSPYPIIVCGDFNNTAFSY-----LYQKIQNR 281 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + F +E IDY D F + + Sbjct: 282 GLIDSFQEEGSGFGKTYYFPYFPFRIDYIFADP---------YFKITSHKVYTGINY--- 329 Query: 292 LSDHCPISIDY 302 SDH P+ + Sbjct: 330 -SDHYPLKATF 339 >gi|229162671|ref|ZP_04290628.1| Exodeoxyribonuclease [Bacillus cereus R309803] gi|228620553|gb|EEK77422.1| Exodeoxyribonuclease [Bacillus cereus R309803] Length = 252 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 84/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + +Y + +ADI LQE+ + + Sbjct: 1 MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQDGQIDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + ++ A+ K + + D R Sbjct: 47 NLEGYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++ ++ + + + L + Sbjct: 92 -----VITLEFEDFHMITLYTPNSKRGLERLDYRMKWEDDFRAYIKRL--------DEKK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + + + + + A Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTCVLEEGFIDTYRYLYPDQKGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV+ + + + + + SDHCP+ Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKNQITEAKINSEV-----------MGSDHCPVE 247 Query: 300 IDYDF 304 + +F Sbjct: 248 LHVNF 252 >gi|297190955|ref|ZP_06908353.1| exonuclease [Streptomyces pristinaespiralis ATCC 25486] gi|197721867|gb|EDY65775.1| exonuclease [Streptomyces pristinaespiralis ATCC 25486] Length = 259 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 81/304 (26%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N T+ L + ++ D++ LQE Sbjct: 1 MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCLQETKCTEE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + R + + + + +AV + L GA D R Sbjct: 41 ------QFPAAQLRELGYESAVNASGRWNGVAVISRVGLDDVVRG-LPGAPDYEGVQEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + + Y + + L +T + Sbjct: 94 A-----ISATCGPVRVWSVYVPNGREVAHDHYGYK------LRWLEALSVAVTDDAAAGR 142 Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF + GDFN + + P+ + Sbjct: 143 PFAVLGDFNIAPTDDDVWDPSFFDGMTHVTPPERAALEALRKRGLADVVPRPLKYE-HPF 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID ++ + D + +GK SDH P+ Sbjct: 202 TYWDYRQLCFPKNRGMRIDLVYGNEPFTAAVKDSFV-------DREERKGKGASDHAPVV 254 Query: 300 IDYD 303 +D D Sbjct: 255 VDLD 258 >gi|156086334|ref|XP_001610576.1| endonuclease/exonuclease/phosphatase family protein [Babesia bovis T2Bo] gi|154797829|gb|EDO07008.1| endonuclease/exonuclease/phosphatase family protein [Babesia bovis] Length = 319 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 99/324 (30%), Gaps = 54/324 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 Q V+++S+N+ L + +++ + + D DI+ LQE+ SY+ Sbjct: 5 QPVKILSYNVQGLPSLLLPIADLDIRMDHIANF--ISSLFQKYDVDIMVLQEVFSYSLYN 62 Query: 82 KVFPKNTWCIFYSTERLINHSKR----------DSNNDIHTAIAVRKKNVRVLQQSYPLL 131 K+ + S + + I + I + ++ V ++ L Sbjct: 63 KIKDALRGIAEDTGIISRPVSNSVLMSCLDTLLSTFSFITSGIVIFSRHPIVYKERL-LF 121 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + R + AV + +NG + V+ HL+S D + + ++Q L Sbjct: 122 SNGFNAERYAGKGAVAARISVNGNLLDVIGTHLQSDEGED--------AQEIRNKQLIEL 173 Query: 192 KDWITQKKESLV------------PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 +WI P V+AGD N ++ + F Sbjct: 174 AEWIGINPLEDERAIAERDSLPYVPMVLAGDLNCSLDSETERFSDVVAALNDKLEDTFGY 233 Query: 240 EKDSRCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSE-----------I 278 + + DY + + + Q + Sbjct: 234 NQPEPTYSTLTNDFCAFQNNPNVFNHVYDYILKNHESTLLEAQRVIKDKLETAFVLPVCD 293 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 ++D + +SDH PI Sbjct: 294 EDDDDCVDPEMYNVSDHYPIIATI 317 >gi|146308751|ref|YP_001189216.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp] gi|145576952|gb|ABP86484.1| Endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp] Length = 362 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 38/325 (11%), Positives = 91/325 (28%), Gaps = 68/325 (20%) Query: 21 AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 Q +++++WN+ L+ + S + + + ++ D+V Sbjct: 51 GQALKVMTWNVQYLAGKRHVFWYDLPGGDGPDERPSSDDLAATLDEVVRVLRDEQPDLVL 110 Query: 71 LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 LQE+ +A ++P ++ ++ + H + + + Sbjct: 111 LQELHDGAKASDYQDQLALLQERLADLYPCSSQAFYWKA-AFVPHPRILGSVGMKLGTLS 169 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174 R + R + P + + + +RA+ + G ++ ++ H +F D Sbjct: 170 RFQIARAERLQLPEIPSDPLSRQFQLKRALLVSHLPIRGGGELVAINTHFDAFAQGDDTM 229 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------LGNNDDFWKTI 228 Q Q + Q + P+++ GD N + Sbjct: 230 RR----------QVQMTDALLQQLQAGASPWILGGDLNLLPPGQFQHLPENQRGWYAADS 279 Query: 229 DPNDSLIRFP--------KEKDSRCNANKNLRNKI------PIDYFVMDQNAYKFLIQES 274 + D R+P + +DY Sbjct: 280 ELQDLAGRYPMIPSLQQASGAQQAQWYTHYPNDPAASGPDRTLDYLFYSPRL-------- 331 Query: 275 FSEILYNEDDIKSRGKRLSDHCPIS 299 + + +SDH P+ Sbjct: 332 ---TPFASQVRQHDTLGISDHLPVI 353 >gi|260910504|ref|ZP_05917172.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] gi|260635346|gb|EEX53368.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] Length = 298 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 40/291 (13%), Positives = 85/291 (29%), Gaps = 44/291 (15%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS- 76 A VR++++N + + Q K L+ D+V +QE+ S Sbjct: 48 AKAEGNVRIMTYNCFYCKSNTASKTF------SAEHTAAFAQVIKALNPDVVVIQELDSG 101 Query: 77 --YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 A + + + S I + ++ + L G Sbjct: 102 TTERAKRYLLDDIRRATGLDYDLFFASAAPYSEGKIGPGVLFKRTMQPTSIKKIELPG-- 159 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R L + +L HL D S +++ + Sbjct: 160 -----KETRALAVLTFP----RFTLLGTHL------DLDVTARKTSAEIVNHELTTFA-- 202 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 +P AGD N ++ F +I + + + + Sbjct: 203 -------TLPVFFAGDLNDSPSWNPEKSAF--------PIINKAFDVITPQSGTSVDQPN 247 Query: 255 IPIDYFVMDQNAYKFL-IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ ++D+ + + ++ + + + +SDH P+ +D F Sbjct: 248 ETIDHVLIDKAHKGAVKVVQTAVVKQLEINGKVTETQTISDHFPVFVDVRF 298 >gi|325106309|ref|YP_004275963.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145] gi|324975157|gb|ADY54141.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145] Length = 287 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 85/303 (28%), Gaps = 31/303 (10%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 +L L F A AQ + + S+N+ + ++ +++ K + Sbjct: 8 ILTLTLFSFSALAVQAQ-LVVGSYNLRL------DIPKVDVGNEWSNRVSMISDIIKFYE 60 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 DI+ QE ++ + + ++ S + Sbjct: 61 FDILGTQEGFAHQLEDLKKVLPNYGEYGVGRDDGKNTGEQSAIFYRKDKFDLLDSGSFWL 120 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 P + ++ R +L++ K + + S L+ Sbjct: 121 SETPEKPSFGWDAQKYRRVCSWILLKDKKTKKKLYCYNAHY---DHQANIARKESSKLIL 177 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ + ++ P ++ GDFN + + + + K + + Sbjct: 178 EKIKNMRK--------GTPVILTGDFNGNPSTEWYKEIAQSNVLFDTYSQTPIKLEGNPT 229 Query: 246 NANKNL----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + ID+ ++ F + GK SDH P+ Sbjct: 230 YQEYGNAELLKGNDVIDHIFTTKD---------FKVKKWGILSNTFHGKYPSDHFPVITF 280 Query: 302 YDF 304 ++ Sbjct: 281 LEW 283 >gi|291515793|emb|CBK65003.1| Predicted extracellular nuclease [Alistipes shahii WAL 8301] Length = 344 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 38/348 (10%), Positives = 82/348 (23%), Gaps = 56/348 (16%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQ-------EGVSLWKNSVKRTTS- 52 M R ++ L L+ + ++V +N L + + + K ++ Sbjct: 1 MKRIFLTGLFASLIAVACFAQKPYKVVFYNFENLFDTIHDPGVLDEEFTPEGPKKWNSAK 60 Query: 53 ------DYTLLRQYAKNLDAD---IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103 + + D D ++ + E+ + + + V + I H Sbjct: 61 YTRKIGNLERVLFDIAAEDKDYPVVIGVSEIENRSVMEDVIAQPK---LAPGNYRIVHYD 117 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 + A R ++ + R V + I+ + + L H Sbjct: 118 SPDARGVDVAFYYRPDVFKLEGSAAIPFKMP-ELPNFRTRDFVTMWGTIDSEPFFFLVSH 176 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 S + + Q + + D + V+ GD N + Sbjct: 177 WPSRLGGKEASAPKRLAAAK---QVKHIVDSV-TAANPATKVVVMGDLNDDATDDSIVEG 232 Query: 224 FW-----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE----- 273 K + D F + D ++ +N Sbjct: 233 LNAKGKIKEVGKGDMFNPFIGLLKAGYGTLAYRDEWNLFDNIIVSENLATGSTGSLKIQP 292 Query: 274 ---------------------SFSEILYNEDDIKSRGKRLSDHCPISI 300 + SDH P+ I Sbjct: 293 AGNSKFYGGIFRRPYMIQKEGQYKGYPLRTFVGNDFQGGFSDHFPVYI 340 >gi|260172872|ref|ZP_05759284.1| Endonuclease/exonuclease/phosphatase [Bacteroides sp. D2] gi|315921155|ref|ZP_07917395.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D2] gi|313695030|gb|EFS31865.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D2] Length = 264 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 81/311 (26%), Gaps = 59/311 (18%) Query: 1 MIRKYVLALVFFLVPCTASVAQ---------KVRLVSWNINTLSEQEGVSLWKNSVKRTT 51 M + + L + +AQ V+ +++N + +Q Sbjct: 1 MNFRICILLFLVCCLLSPVMAQRDKNKQKEVTVKAMTYNTYSGRKQG------------- 47 Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 + + K D DIV LQE+ + + + D Sbjct: 48 --IDKIAEVIKLEDPDIVSLQEIERNTEINPWDTPERLSVLTGMKYYYFAHALDIPTGGD 105 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 + K ++S+ L K++ R + V GK+ + HL Sbjct: 106 YGNVILSKFPISEEKSFKLSVLKENDY---VRSFGYVKVMKEGKEFYFATTHLDHEYEDA 162 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 + + + + + ++ P ++ GD N + F K N Sbjct: 163 AR--------------LKQIDEILACMEQLDKPIILGGDLNSRRGSATM-AVFQKYFTVN 207 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 P +LI ++ + Sbjct: 208 CLSDAAPWTVPVPSPTYT-----------------CDWLIYAPNEAFTVKAYNVCYWADK 250 Query: 292 LSDHCPISIDY 302 SDH P+ Y Sbjct: 251 ESDHYPVVATY 261 >gi|254471153|ref|ZP_05084555.1| 5'-nucleotidase [Pseudovibrio sp. JE062] gi|211959299|gb|EEA94497.1| 5'-nucleotidase [Pseudovibrio sp. JE062] Length = 1553 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 47/373 (12%), Positives = 96/373 (25%), Gaps = 91/373 (24%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 A V ++++ S+N+ G ++ + + ++DAD+ LQE+ + Sbjct: 1177 PADVGGELKVSSFNVLNYFTTLGQRGA-STEADLARQTDKIVKAMLDIDADVFGLQELEN 1235 Query: 77 Y------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A+ T ++ I T + R + V+ Sbjct: 1236 NGFDDASAISALVDALNAELTAQGRTDELYTFVNPTDGAPIGSDAITTGMIYRPSKLTVI 1295 Query: 125 QQSYP-------------------LLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHL 164 + NR V E NG++ + H Sbjct: 1296 ETETYTYQETSAATTYAIADRLQEFADRSYVGDFQRNRPTVATTFEDANGERFTLAVNHY 1355 Query: 165 KSFCFLD--------------------------------------SLENTYSPSCSLLSQ 186 KS + + Sbjct: 1356 KSKGPSGLSDLVEDIQGKLDAGTIPAADVAQVQADLDALIADPNYDQGDGQAFWAQARED 1415 Query: 187 QAQWLKDWITQKKES---LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 A+ L +W+ + ++ GD N D + I+ D + Sbjct: 1416 AAKELHEWLRTEYAGAGLDPDILVIGDLNTYGK----GDSVQELIEGGDMTDLLSQYLGD 1471 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------------ 291 + + +D+ + + + + + I +E D+ S R Sbjct: 1472 EAYSFVFDGQRGSLDHALASDSLAEQVTGLAEWHINADEPDLLSYNSRFTDAGFYNDDQY 1531 Query: 292 -LSDHCPISIDYD 303 SDH P+ I D Sbjct: 1532 GASDHDPLIIGLD 1544 >gi|190576404|ref|YP_001974249.1| putative endonuclease/exonuclease/phosphatase family protein [Stenotrophomonas maltophilia K279a] gi|190014326|emb|CAQ47973.1| putative endonuclease/exonuclease/phosphatase family protein [Stenotrophomonas maltophilia K279a] Length = 255 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 87/304 (28%), Gaps = 75/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N+L+ L Q+ ++ DIV +QE Sbjct: 1 MKIASWNVNSLN----------------VRLPHLEQWLRDFGPDIVGIQET--------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + ++ + +A+ + + G +D R Sbjct: 36 -KLEDHKFPDSALIAAGYRSVFASQKTYNGVALLSREP-AQDVQIGIPGFEDEQKR---- 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + V+++++ + + + + Y + Q + WI Q+ + Sbjct: 90 -----VIAGTFGDLRVINLYVVNGQDVGTDKYEYK------LRWLQAVHAWIAQELQRHP 138 Query: 204 PFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GDFN + +D + + F + + Sbjct: 139 KLIVMGDFNIAPDARDVHDPEVWNENHILTSTAERGALQKLLQLGLHDGF-RLHNDEAGV 197 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID ++ + D +R SDH P Sbjct: 198 FSWWDYRAAGFRRNLGLRIDLTLVSDALKAGAVASGI-------DREPRTWERPSDHAPA 250 Query: 299 SIDY 302 ++ Sbjct: 251 WVEI 254 >gi|327188747|gb|EGE55945.1| exodeoxyribonuclease III protein [Rhizobium etli CNPAF512] Length = 263 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 82/303 (27%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N ++ +L ++ K D+V LQE+ + +A Sbjct: 1 MKIATYNVNGING----------------RLDILLRWLKEDAPDVVCLQELKTDDA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +A+ K + L G D Sbjct: 41 ------KFPRKETERAGYGAVWHGQRSWNGVAILAKGKTPILTRRGLPGDPDDTHSRYIE 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 AV+ ++ + ++L + S + Y + + L + + E V Sbjct: 95 AAVDGVL--------IGSLYLPNGNPFPSAKFEYK------LRWFRRLSAYAAELLEIEV 140 Query: 204 PFVIAGDFNRKINY---LGNNDDFWKTIDPND-----------SLIRFPKEKDSRCNANK 249 P ++AGDFN + + + Sbjct: 141 PSILAGDFNVMPTEIDVYKPERWLDDALFRPEVRKAYAQLVAQGWTDAVRHLHPGERIYT 200 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ +L + SDH P+ I Sbjct: 201 FWKYWRNSFERDAGLRIDHLLLSPTVAPWLRSARVR-------RKPRGWEHTSDHAPVMI 253 Query: 301 DYD 303 + D Sbjct: 254 ELD 256 >gi|316935446|ref|YP_004110428.1| 5'-nucleotidase domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315603160|gb|ADU45695.1| 5'-Nucleotidase domain protein [Rhodopseudomonas palustris DX-1] Length = 2775 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 41/350 (11%), Positives = 92/350 (26%), Gaps = 67/350 (19%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQ---------EGVSLWKNSVKRTTSDYTLLRQYAKNL 64 +P V ++++ S+N+ ++ L + Sbjct: 623 IPAPEDVNGRLKVASFNVLNYFATLDNGGATAIGAAPRGADNAAEFARQTEKLVGTILEM 682 Query: 65 DADIVFLQEMGSY-------NAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAV 116 + D++ L E+ + NA+ + + ++ ++ D I Sbjct: 683 NVDVLALTELENDFSASSSGNAIKYLVDRLNAQAGAGVYAWVDPGQQFVGGDAIAVGFIY 742 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAG-------------------NRRAVELLVE--INGK 155 + +V++ + G +R A+ + E G+ Sbjct: 743 KTTSVKIADGTTVETLGDADLPGLGLGGLTAQSTVGAVFDGENTSRNALAVTFEELSTGE 802 Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCS-LLSQQAQWLKDWI------TQKKESLVPFVIA 208 + HLKS + + Q + + + ++ Sbjct: 803 TFTAIANHLKSKSGTGTGVDADQGDGQGNWRNQRELAATALTAWAASDPTGSNDPDVMLL 862 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 GDFN K I+ +E + +DY + + Sbjct: 863 GDFNGYAKEQST-----KIIETAGFENLHSREN--GAYSYVFDGQTGTLDYAFTNGSLGS 915 Query: 269 FLIQESFSEILYNEDDIKSRG---------------KRLSDHCPISIDYD 303 + + I +E D R+SDH P+ + D Sbjct: 916 QVSGVTTWHINADEADALDYNTDYGRDTSIFDGSAPTRVSDHDPVVVGLD 965 >gi|253582729|ref|ZP_04859949.1| exodeoxyribonuclease III [Fusobacterium varium ATCC 27725] gi|251835305|gb|EES63846.1| exodeoxyribonuclease III [Fusobacterium varium ATCC 27725] Length = 253 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 74/303 (24%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L Y KN +ADI +QE Sbjct: 1 MKLISWNVNGLRAAVQKGF---------------LDYFKNENADIFCIQETKLQEG-QIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + G R Sbjct: 45 LDLEGYHQYWNYAEKKGY----------SGTAIFTKKKPIEVS----YGLGIEEHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + + L Sbjct: 91 -----VITLEYEDFYMITVYTPNSQEELARLDYRMSWEDEFRNYVMKLDKL--------K 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P +I GD N + + N + F A Sbjct: 138 PVIICGDLNVAHKEIDLKNPKSNRKNAGFSDEERAKFTELLENGFIDSFRHFYPEVTGAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + + + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSERLKDIMEGAEIHNEIL-----------GSDHCPVV 246 Query: 300 IDY 302 + Sbjct: 247 LKL 249 >gi|255540403|ref|XP_002511266.1| ap endonuclease, putative [Ricinus communis] gi|223550381|gb|EEF51868.1| ap endonuclease, putative [Ricinus communis] Length = 326 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 52/307 (16%), Positives = 103/307 (33%), Gaps = 44/307 (14%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + Q ++ ++WN N+L + R +D+ ++ LD D++ +QE+ Sbjct: 34 NNTTNKQPLKFITWNANSL------------LLRAKNDWPEFTKFVSTLDPDVIAIQEVR 81 Query: 76 SYNAVAKVFPKNTWCI----------------FYSTERLINHSKRDS---NNDIHTAIAV 116 A +K PKN + S+ ++ S + TA+ V Sbjct: 82 MPAAGSKGAPKNPGELKDDTSSSREEKQILMRALSSPPFGSYKIWWSLADSKYAGTALLV 141 Query: 117 RKKNVRVLQQSYPLLGAKDSFS-RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 +K+ + DSF + ++R +E +V+++ K + S Sbjct: 142 KKRFHNIKVSFSLDKSGGDSFREKKMDKRMLEFVVQLSDKPLIWCGDLNVS-------HE 194 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 S A+ K++ P + R + L + Sbjct: 195 EIDVSHPEFFIAAKQNGYVPPNKEDCGQPGFTLNERKRFGSILREGKLIDAYRFLHKEKD 254 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 S K ++ IDYF++ + +I I+ +G SDH Sbjct: 255 MERGFSWSGNPIGKYRGKRMRIDYFIVSEKLKGRIISCEMH-----GQGIELQGFYGSDH 309 Query: 296 CPISIDY 302 CP+S++ Sbjct: 310 CPVSLEL 316 >gi|167771017|ref|ZP_02443070.1| hypothetical protein ANACOL_02371 [Anaerotruncus colihominis DSM 17241] gi|167666687|gb|EDS10817.1| hypothetical protein ANACOL_02371 [Anaerotruncus colihominis DSM 17241] Length = 250 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 77/303 (25%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N L G + DAD V LQE + A + Sbjct: 1 MKLVSWNVNGLRACLGKGF---------------LDFFSAADADAVCLQETKMHQEQADL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S E ++ AV + + + DS R Sbjct: 46 ELPGYQQFWNSAE-----------KKGYSGTAVFTRVPPLNVTYGIGMAEHDSEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++++ + + + + ++ ++ Sbjct: 91 -----VITVEYEPFYLVNCYTPN-------AQRELARLEYRMKWEDDFRAYLMS-LDAKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + F A Sbjct: 138 PVVLCGDLNVAHQEIDLKNPKTNRRNAGFSDEERAKMTELLAGGFVDTFRALYPDVTGAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ + + SDHCP+ Sbjct: 198 TWWSYLRRARDTNAGWRIDYFIVSERLRGAVHDSRIR-----------ADVMGSDHCPVE 246 Query: 300 IDY 302 +D Sbjct: 247 LDL 249 >gi|256827574|ref|YP_003151533.1| exodeoxyribonuclease III [Cryptobacterium curtum DSM 15641] gi|256583717|gb|ACU94851.1| exodeoxyribonuclease III [Cryptobacterium curtum DSM 15641] Length = 262 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 75/304 (24%), Gaps = 67/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RLVSWN+N L E +L AD+ LQE Sbjct: 1 MRLVSWNVNGLRAAEKKGF---------------SDIFTSLKADVFALQETKLQEG-QID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +S +S + V L + + Sbjct: 45 LEFPDYESHWSYAERKGYSGTAVYARQKPLQVLHGLGVPHLDTEGRICALEFPEFWF--- 101 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + V + ++ + + + + + Sbjct: 102 -------------VDVYTPNAQNELARIDHRMEWDDAFRDFCKGLEKGTTPLGPDTAQPK 148 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GDFN + + + + F + A Sbjct: 149 PVIMCGDFNVAHEEIDLKNPKSNRGNAGFSDEEREKFTKLLDAGFVDTFRLLNPTEVGAY 208 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ ++ + L+ SDHCP+S Sbjct: 209 SWWSYRFNARANNAGWRIDYFLVSKSLADRVRAARIHADLF-----------GSDHCPVS 257 Query: 300 IDYD 303 +D D Sbjct: 258 LDID 261 >gi|182438103|ref|YP_001825822.1| putative exodeoxyribonuclease [Streptomyces griseus subsp. griseus NBRC 13350] gi|178466619|dbj|BAG21139.1| putative exodeoxyribonuclease [Streptomyces griseus subsp. griseus NBRC 13350] Length = 271 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 74/305 (24%), Gaps = 61/305 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + S N+N L ++ DAD+V LQE+ + A Sbjct: 2 LTVTSVNVNGLRAAAKKGF---------------VEWLAGTDADVVCLQEVRAELA---- 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 H+ A + G + + Sbjct: 43 -----QLPEGVGAPEGWHTVHAPAAAKGRAGVSLYSRQAPERTQIGFGGFGVPGAEEFDA 97 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +++ G + V ++L S ++ + Q LK Sbjct: 98 SGRYAEIDLPG--VTVASLYLPSGEVGTERQDEKERFMAAFLPYLQGLKARA---AADGR 152 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 V+ GD+N + ++ + Sbjct: 153 EVVVCGDWNIAHREADLKNWKANRKSSGFLPEERAWLTRVLEEAAYVDVVRALHPDVEGP 212 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY + ++ + + G+R SDH P+ Sbjct: 213 YSWWSYRGRAFDNDSGWRIDYQMATPGLAGRAVKAWV-------ERAATHGERWSDHAPV 265 Query: 299 SIDYD 303 ++ Y+ Sbjct: 266 TVVYE 270 >gi|166030570|ref|ZP_02233399.1| hypothetical protein DORFOR_00233 [Dorea formicigenerans ATCC 27755] gi|166029572|gb|EDR48329.1| hypothetical protein DORFOR_00233 [Dorea formicigenerans ATCC 27755] Length = 250 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 77/303 (25%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N + G + + DADI +QE Sbjct: 1 MKFISWNVNGIRACAGKGFM---------------DFFQETDADIFCIQETKMQEG-QLE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + + D R Sbjct: 45 LDTPGYHQYWN----------YAKKKGYSGTAIFTKQEPISVSYGLGIEEHDQEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + + + ++ + + + + L++ Sbjct: 91 -----VITLEFEDFYFITVYTPNSQSELARLDYRMKWEEDFLTYLKKLEE--------TK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + F + Sbjct: 138 PVIFCGDLNVAHTEIDLKNPKTNRKNAGFTDEERQKFTELLNAGFVDTFRYFYPEQTGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + ++ L ED SDHCP+ Sbjct: 198 SWWSYRFSARAKNAGWRIDYFCVSESLKDRL-----------EDAKILTDIMGSDHCPVE 246 Query: 300 IDY 302 +D Sbjct: 247 LDI 249 >gi|114321996|ref|YP_743679.1| endonuclease/exonuclease/phosphatase [Alkalilimnicola ehrlichii MLHE-1] gi|114228390|gb|ABI58189.1| Endonuclease/exonuclease/phosphatase [Alkalilimnicola ehrlichii MLHE-1] Length = 276 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 40/290 (13%), Positives = 90/290 (31%), Gaps = 54/290 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFLQE 73 +++R++S+NI + E + + + + D+V LQE Sbjct: 25 PRQLRVMSYNIQSGLETRRYHHYVTRGWQHFWPSSSREGNLDRMGHML--HQYDLVGLQE 82 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + + + + T + + + + N + + + Sbjct: 83 VDAGSFRTGYVNQVEYLARRGTFPYWYYQ-----TNRNLGRLAQHSNGLLTRYRPASIDE 137 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 R R A+ L G+ + V+ +HL S + Q +L D Sbjct: 138 HALPGRVPGRGALHLRFGGAGEALNVIIVHLAL-------------SRRARATQLAYLAD 184 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 I + ++ GDFN + T+ L+ + + + + Sbjct: 185 LINEH----RHVIVMGDFNCHSRSPE-----FTTLVDRTELLEPVHDL----HTFPSWKP 231 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ID+ ++ + + + LSDH PI++D Sbjct: 232 QRNIDHILLSSSLEVGHV--------------RVLDYPLSDHLPITMDIS 267 >gi|226304979|ref|YP_002764937.1| exodeoxyribonuclease III [Rhodococcus erythropolis PR4] gi|226184094|dbj|BAH32198.1| putative exodeoxyribonuclease III [Rhodococcus erythropolis PR4] Length = 266 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 33/307 (10%), Positives = 70/307 (22%), Gaps = 70/307 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + + D D++ +QE + Sbjct: 1 MRIATWNVN----------------SVRARTDRIIDWLGRSDVDVLAMQETKCKDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR--VLQQSYPLLGAKDSFSRAG 141 Y + I + +A+ + V G Sbjct: 41 ------QFPYERFKEIGYEVAHVGLSQWNGVAIASRVGLDDVQIGFEDQPGFDKDPEADP 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--K 199 R A + G + V +++ + L+ Y L+D + Sbjct: 95 VREARAIGATCGG--VRVWSLYVPNGRELEDPHYAYKLD------WLAKLRDDAEGWLKQ 146 Query: 200 ESLVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSR 244 + + GD+N + + Sbjct: 147 DPDAQIALVGDWNVAPTDDDVWDPAFFEGKTHTSEPERAAFTAFTESGFADVVRPYTPGP 206 Query: 245 CNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 ID+ + + D + +GK SDH Sbjct: 207 -GVYTYWDYTQLRFPKKQGMRIDFILGSPAFAARVEAAEI-------DRNERKGKGASDH 258 Query: 296 CPISIDY 302 P+ + Sbjct: 259 APVIVKL 265 >gi|261341374|ref|ZP_05969232.1| endonuclease/exonuclease/phosphatase family protein [Enterobacter cancerogenus ATCC 35316] gi|288316685|gb|EFC55623.1| endonuclease/exonuclease/phosphatase family protein [Enterobacter cancerogenus ATCC 35316] Length = 253 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 38/286 (13%), Positives = 74/286 (25%), Gaps = 49/286 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++++ NI+ LR + + ADIV LQE+ + V Sbjct: 9 SLKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P F + +++ + H AV + S Sbjct: 59 MHVENWPDTPHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRFPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + R + + + + + Q Q L +W Sbjct: 114 VGESEKRGLLYCRIAPPDLTFPIHVGCVHLGLR-----------EAHRQAQLQMLAEWTN 162 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 P V+AGDFN + ++ F + + Sbjct: 163 A-LPEGEPVVVAGDFNDWRQRANHPLKAEAGLEE-----IFTRAHGRPARTFPVRFPLLR 216 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + + LSDH P+S + Sbjct: 217 LDRIYVKNAHASS-----------PTALALLNWRHLSDHAPLSAEI 251 >gi|189467767|ref|ZP_03016552.1| hypothetical protein BACINT_04159 [Bacteroides intestinalis DSM 17393] gi|189436031|gb|EDV05016.1| hypothetical protein BACINT_04159 [Bacteroides intestinalis DSM 17393] Length = 335 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 33/341 (9%), Positives = 87/341 (25%), Gaps = 57/341 (16%) Query: 1 MIRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKN-----------S 46 M + L ++ V + + + +N+ L + + + + Sbjct: 1 MKKLLFLISLWLCVTTADAQQNERDLYSVAFYNLENLFDTIHDAGKNDLEFLPSGSYVWT 60 Query: 47 VKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99 ++ + L + + D ++ + E + + + + + Sbjct: 61 AEKYEAKLKNLAKVLSEVSRDRVPGGPAVIGVAEAENNRVLTDLVSQPAISNYKFVHYEG 120 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + I A+ + V L + + R + + ++ G+++ Sbjct: 121 PDKR-----GIDCALLYDPEQFTVTNSKLVLSTPFEGDTVHLTRGFLIVDGQMAGERVCF 175 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 + H S SP ++Q + L D + + + + ++ GD N Sbjct: 176 IVNHWPSR-------GAKSPVRVHAAKQVRALADSLMRT-DKKLKLIVMGDMNDDPMDES 227 Query: 220 N-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK------ 268 + + +D D V+ + K Sbjct: 228 MVTLGARKYAKQVKKGEFYNPWWETLEDKGVGTLLYRGKWNLFDQIVVSRPLLKAKKGLK 287 Query: 269 ------------FLIQESFSEILYNEDDIKSRGKRLSDHCP 297 F + + SDH P Sbjct: 288 YDHNEVFIREYLFQQDGKYKGSPLRTHGGRVWLNGYSDHLP 328 >gi|326778748|ref|ZP_08238013.1| exodeoxyribonuclease III Xth [Streptomyces cf. griseus XylebKG-1] gi|326659081|gb|EGE43927.1| exodeoxyribonuclease III Xth [Streptomyces cf. griseus XylebKG-1] Length = 271 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 35/307 (11%), Positives = 77/307 (25%), Gaps = 65/307 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81 + + S N+N L ++ DAD+V LQE+ + Sbjct: 2 LTVTSVNVNGLRAAAKKGF---------------VEWLAGTDADVVCLQEVRAELAQLPE 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +V W ++ + + + G + Sbjct: 47 EVGAPEGWHTVHAPAAAKGRAGVSLYSRQAP-----------ERTQIGFGGFGVPGAEEF 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +++ G + V ++L S ++ + Q LK Sbjct: 96 DASGRYAEIDLPG--VTVASLYLPSGEVGTERQDEKERFMAAFLPYLQGLKARA---AAD 150 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 V+ GD+N + ++ + Sbjct: 151 GREVVVCGDWNIAHREADLKNWKANRKSSGFLPEERAWLTRVLEEAAYVDVVRALHPDVE 210 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + IDY + ++ + + G+R SDH Sbjct: 211 GPYSWWSYRGRAFDNDSGWRIDYQMATPGLAGRAVKAWV-------ERAATHGERWSDHA 263 Query: 297 PISIDYD 303 P+++ Y+ Sbjct: 264 PVTVVYE 270 >gi|226469330|emb|CAX70144.1| Nocturnin [Schistosoma japonicum] Length = 339 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 82/307 (26%), Gaps = 26/307 (8%) Query: 23 KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 K+R++ WNI + + L+ + D DIV LQE + Sbjct: 28 KIRIMQWNILAQGFIPLDEFVHCPCKMLSFERRCRLIAEEIFRYDPDIVCLQEADIIKDI 87 Query: 81 AKVF----PKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 ++ K+ + ++ + ++++ A+ R ++++ L D Sbjct: 88 VEILTTRRGKDDYSFYFLPKYNSPCLMIKNNHGPDGLAVIYRNDKYKLIKTEKIPLNEDD 147 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 S + + N + I L E L++ + +++ Sbjct: 148 SRHALFCHFVPKAVGSSNKSFSDIYLICLHLKAKETYREIRKKQGQKLINYLSSFIERIC 207 Query: 196 TQKKESL----VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR-----FPKEKDSRCN 246 + P I GDFN N + + N + Sbjct: 208 STGLSVNSNVFPPIFICGDFNADPTEPVINLLQNFSFNSNTLYKLTSAYYVAEGCKEPEF 267 Query: 247 ANKNLRNKIPI----------DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 +R I DY L S SDH Sbjct: 268 TTWKIRKSKRITNLTEICHTVDYIWYCNQLCTLLGVWSIPSKREIGPSGLPSAIFPSDHM 327 Query: 297 PISIDYD 303 + D+ Sbjct: 328 NLIADFS 334 >gi|222150120|ref|YP_002551077.1| exodeoxyribonuclease III [Agrobacterium vitis S4] gi|221737102|gb|ACM38065.1| exodeoxyribonuclease III [Agrobacterium vitis S4] Length = 267 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 77/306 (25%), Gaps = 68/306 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L +WNIN ++ + K DI+ LQE+ N Sbjct: 2 TFSLTTWNIN----------------SVRLRMPIVEHFLKLRQPDILCLQEIKCQN---- 41 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + L + +A K G DS Sbjct: 42 -----HEFPLEAFQALGYPYAILHGQKGYHGVATVSKFPLTEDHRQDFCGVGDSRH---- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + + E NG++I + + ++ + D +P + +K ++ E Sbjct: 93 ---ISAIFEWNGRRIRLHNFYVPAG--GDEPNRDINPKFGHKLDFVEEMKA-LSASAEPN 146 Query: 203 VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD N + I+ + + D Sbjct: 147 TSAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETAGLLDVINRGGWVDLMRQLVDPSQK 206 Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ + L ++ SDH Sbjct: 207 LYTWWSYRAKDWDSADKGRRLDHIWSSPDLLPSLK-------TIEILREARGWEKPSDHV 259 Query: 297 PISIDY 302 P+++ + Sbjct: 260 PVTVQF 265 >gi|254414082|ref|ZP_05027850.1| endonuclease/exonuclease/phosphatase family [Microcoleus chthonoplastes PCC 7420] gi|196179218|gb|EDX74214.1| endonuclease/exonuclease/phosphatase family [Microcoleus chthonoplastes PCC 7420] Length = 316 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 46/286 (16%), Positives = 89/286 (31%), Gaps = 39/286 (13%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + A ++++ S+N+ + V K+ D DI E+ + Sbjct: 30 PAHASQLKVASFNVESGDAVPSVIARKHIGP--------------LEDIDIWGFSEVQNE 75 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + + + AIA + + + L + Sbjct: 76 SWLLDLEQGTE----DGENADFKTILGSTGRGDRLAIAYNSNL--LEEVKHYELDDINIG 129 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R + + G++ + HL Y S S +QAQ L +W Sbjct: 130 GRVRAPLVAQFRFKPTGEEFLFVVNHL------------YRSSESSRHEQAQLLNEWGRS 177 Query: 198 KKESLVPFVIAGDFNRKIN-YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 ++ +P + AGD+N + G +D+ W + +D +K + R Sbjct: 178 QE---LPIIAAGDYNFDWDVVSGVHDEGWDFLTADDVFTWVKPDKLVAT--LCSDRYDSV 232 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D+ + A + S D K SDH PI + Sbjct: 233 LDFVFVAGEAKNW-SASSVILYSEPSDAYCPDDKTTSDHRPILATF 277 >gi|160885982|ref|ZP_02066985.1| hypothetical protein BACOVA_03988 [Bacteroides ovatus ATCC 8483] gi|156108795|gb|EDO10540.1| hypothetical protein BACOVA_03988 [Bacteroides ovatus ATCC 8483] Length = 366 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 43/290 (14%), Positives = 79/290 (27%), Gaps = 50/290 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + ++N++ + + + Y +NL ADI+ QE + Sbjct: 110 LTVATYNVDAFNHEHTGYSC-----------KEIASYMRNLQADILCFQEF----GINDE 154 Query: 84 FPKNTWCIFYSTERLIN-HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 F ++ S + + + A+ R YP + Sbjct: 155 FGVDSIAAVLSDWPYYYIPISPEGKHLLQLAVFSRYPIKEENLIVYPDSKNCSLWCDIET 214 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY------------SPSCSLLSQQAQW 190 L + + V K L + ++ + + QA Sbjct: 215 NARTIRLFNNHLQTTEVSQNKRKLEKGLHTDDSQRVERAALGLIDGLHENFRKRAVQANT 274 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 LK I S P +I GDFN + + + F K Sbjct: 275 LKQLI---AASPYPTIICGDFNSLPSSYVYHTVKGDKLQDG-----FQTSGHGYMYTFKF 326 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ + IDY + N D S SDH P+ + Sbjct: 327 FKHLLRIDYILHSPEL--------------NSTDYFSPDLTYSDHNPVVM 362 >gi|299133181|ref|ZP_07026376.1| exodeoxyribonuclease III Xth [Afipia sp. 1NLS2] gi|298593318|gb|EFI53518.1| exodeoxyribonuclease III Xth [Afipia sp. 1NLS2] Length = 271 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 36/307 (11%), Positives = 73/307 (23%), Gaps = 64/307 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L +WNIN L+ ++ K+ D++ LQE + Sbjct: 2 PFTLTTWNIN----------------SVRLRIDLVAKFLKSRRPDVLCLQE---TKCIDD 42 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP + RL + + +A+ K V + G D + Sbjct: 43 AFPLKRFQ------RLGYEHIALNGQKGYHGVAIVSKRPFVSKDVRTFCGKID------S 90 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R E G ++ + D + +P ++D + Sbjct: 91 RHISVAFGESAGLSAPLVLHNFYVPAGGDIPDPAANPKFEHKLSFLDEMRDCAPLHPQGD 150 Query: 203 VPFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD N + + + + Sbjct: 151 ARHILVGDLNVAPHEHDVWSHKQLLNVVSHTPVECEKLLAVQSQGNWVDIARQRIPMDEK 210 Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ + + +R SDH Sbjct: 211 VYTWWSYRAADWTVGNRGRRLDHIWVSPALGDK-------VSDFRITRDARSWERPSDHV 263 Query: 297 PISIDYD 303 P++ D Sbjct: 264 PVTAVLD 270 >gi|215409940|ref|ZP_03418748.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis 94_M4241A] gi|298523903|ref|ZP_07011312.1| exodeoxyribonuclease III protein XthA [Mycobacterium tuberculosis 94_M4241A] gi|298493697|gb|EFI28991.1| exodeoxyribonuclease III protein XthA [Mycobacterium tuberculosis 94_M4241A] Length = 273 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 66/305 (21%), Gaps = 66/305 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N + + + D D++ +QE + Sbjct: 6 LRLATWNVN----------------SIRTRLDRVLDWLGRADVDVLAMQETKCPDG---- 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + D +A+ + + S Sbjct: 46 ------QFPALPLFELGYDVAHVGFDQWNGVAIASRVGLDDVRVGFDGQPSWSGKPEVAA 99 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202 + I V +++ + LD TY L+D Sbjct: 100 TTEARALGATCGGIRVWSLYVPNGRALDDPHYTYKLD------WLAALRDTAEGWLRDDP 153 Query: 203 -VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P + GD+N + I Sbjct: 154 AAPIALMGDWNIAPTDDDVWSTEFFAGCTHVSEPERKAFNAIVDAQFTDVVRPFTPGP-G 212 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 ID+ + + + +GK SDH P Sbjct: 213 VYTYWDYTQLRFPKKQGMRIDFILGSPALA-------ARVMDAQIVREERKGKAPSDHAP 265 Query: 298 ISIDY 302 + +D Sbjct: 266 VLVDL 270 >gi|148560443|ref|YP_001259818.1| exodeoxyribonuclease III [Brucella ovis ATCC 25840] gi|225628198|ref|ZP_03786233.1| exodeoxyribonuclease III [Brucella ceti str. Cudo] gi|148371700|gb|ABQ61679.1| exodeoxyribonuclease III [Brucella ovis ATCC 25840] gi|225617023|gb|EEH14070.1| exodeoxyribonuclease III [Brucella ceti str. Cudo] Length = 289 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 80/309 (25%), Gaps = 68/309 (22%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + + +WNIN L+ Q+ ++ D++ LQE Sbjct: 21 SMAFSIATWNIN----------------SVRLRMPLVEQFLRDYQPDVLCLQETKCP--- 61 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +FP + S + +A + + D Sbjct: 62 DDLFPAKGFRAL------GYEHIAISGQKGYHGVATVSRRPLDGVEKVDFCNMGDCRH-- 113 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + +VE +K+ + + ++ + D + +P + + ++ I +K+ Sbjct: 114 -----LSAVVEAGDRKLRIHNFYVPAG--GDEPDPEINPKFAHKLAFLEEMRAIIADRKD 166 Query: 201 SLVPFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSR 244 ++ GD N N + ++ K + + Sbjct: 167 -GCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRIKGGWSDLMRHLIAAD 225 Query: 245 CNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + +D+ + + R SD Sbjct: 226 QKIYTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG-------LQVLRDARGWDRPSD 278 Query: 295 HCPISIDYD 303 H P+ +D Sbjct: 279 HVPVIATFD 287 >gi|71737390|ref|YP_276477.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557943|gb|AAZ37154.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 363 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 44/325 (13%), Positives = 94/325 (28%), Gaps = 68/325 (20%) Query: 21 AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 Q +++++WNI L+ + + + + + + ++ DIV Sbjct: 52 GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYNLDEVARVIRDEQPDIVL 111 Query: 71 LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 LQ + VA ++P +T ++ E + N S A Sbjct: 112 LQGVDDGAKNSDYEDQLALIKERVADLYPCSTQAFYWKAEFVPNPHIWGS-VGRKLATLS 170 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174 R + P+ A + + A+ + +G K+ V++ L + Sbjct: 171 RFHIDSAERVQLPVPDANIISRQFQPKDALLVSYLPLRDGGKLAVINTSLTTARHTGD-- 228 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI------ 228 +Q + + + + P++I GDFN + + Sbjct: 229 --------TAQKQVVATEKQLDKLESCGTPWLIGGDFNLLPLGQYQRLPEEQRLGYAADS 280 Query: 229 ---DPNDSLIRFPKEKDSR----CNANKNLRNKIPI-------DYFVMDQNAYKFLIQES 274 + + P +S + N I DY + + S Sbjct: 281 ELHELWEKYPMIPDNAESGGIDRGKWLTHFPNDSRINGPDRTVDYLFYSPSLKR----VS 336 Query: 275 FSEILYNEDDIKSRGKRLSDHCPIS 299 + +SDH P+ Sbjct: 337 ARV-------RRDDTLLISDHLPVI 354 >gi|319942253|ref|ZP_08016568.1| exodeoxyribonuclease III Xth [Sutterella wadsworthensis 3_1_45B] gi|319804126|gb|EFW01026.1| exodeoxyribonuclease III Xth [Sutterella wadsworthensis 3_1_45B] Length = 269 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 72/305 (23%), Gaps = 65/305 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL SWN+N+L + + ++ D + +QE + + V Sbjct: 4 LRLASWNVNSL----------------KVRLPQVLDWLESAKIDALVMQETKTTDDV--- 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ + V L + Sbjct: 45 -------FPQAAFAEAGFDVFFLGQKTYNGVALCSRQTTVKTSDVVLGLPGWPDPQKRFI 97 Query: 144 RAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 A+ + + I + + + S + Y L+ + Sbjct: 98 SALLSPLAAPEQPPIRFCGGYFPNGQAVGSSKYLYKLD------WIAVLERTLKTYLADT 151 Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 V+ GDFN + + F Sbjct: 152 PRLVLGGDFNIAPADADVWNPEAWRGKILCSEPERKALERLFALGLYDSFRLFTQPAER- 210 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID ++ + + S DD + SDH P+ Sbjct: 211 FSWWDYRQSGFERNHGLRIDLLLVSEALKGAVESASI-------DDGPRGNPQPSDHAPV 263 Query: 299 SIDYD 303 +D Sbjct: 264 MLDLS 268 >gi|255010782|ref|ZP_05282908.1| hypothetical protein Bfra3_16703 [Bacteroides fragilis 3_1_12] gi|313148587|ref|ZP_07810780.1| endonuclease/exonuclease/phosphatase family [Bacteroides fragilis 3_1_12] gi|313137354|gb|EFR54714.1| endonuclease/exonuclease/phosphatase family [Bacteroides fragilis 3_1_12] Length = 339 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 40/342 (11%), Positives = 92/342 (26%), Gaps = 57/342 (16%) Query: 2 IRKYVLALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKN----------- 45 ++K ++A F ++ AQ+ + +N+ L + + + Sbjct: 1 MKKLIIAFGFLVLLSVGVRAQEHKDGLYSVAFYNLENLFDTIHDAGKNDYEYLPDAAKGW 60 Query: 46 SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + ++ S L + L D + + E+ + N + + + + Sbjct: 61 NSEKYHSKLKKLSKVLGELSRDKVPAGPAAIGVAEVENRNVLEDLIRQPEMA---AGGYR 117 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 H + I A+ K + L + + R + + E+ G K+ Sbjct: 118 YIHYEGPDKRGIDCALLYDPKQFTPRTTALVLSTPFEGDTIHKTRGFLIVGGELAGDKVC 177 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 ++ H S P + Q + LKD + + + + +I GD N Sbjct: 178 MIVNHWPSR-------GAEEPVRMHAAMQVKALKDSLMR-SDKDLKLIIMGDLNDDPMDQ 229 Query: 219 GN-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ- 272 + + + +D D ++ + + Sbjct: 230 SLAVLGAKKHVEDMTEDDLYNPWWVTLEDKGVGTLLYRGKWNLFDQIIISPSLLQAAKGL 289 Query: 273 -----------------ESFSEILYNEDDIKSRGKRLSDHCP 297 + K SDH P Sbjct: 290 KYDHNEVFLREYLFQQEGRYKGSPLRTYGGKVWLDGYSDHLP 331 >gi|327404572|ref|YP_004345410.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM 16823] gi|327320080|gb|AEA44572.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM 16823] Length = 580 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 44/338 (13%), Positives = 94/338 (27%), Gaps = 49/338 (14%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++ +LAL+ ++ +R+VS+N+ N+ +D LR+ Sbjct: 1 MKYALLALLMAFGIAASAQMVPLRIVSYNLLNFPNGRNDCGGGNTNLPNRAD--TLRKIM 58 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + L DI+ E+ + V ++ + + S D+ + + Sbjct: 59 QYLKPDILAGCEIQTAAGCDSVLNRSLNVFGTTYYQRAAFISNSSGGDLQNMLFYNSNKL 118 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + +Q G +D L + I V HLK+ Sbjct: 119 TLKEQRIIQTGVRDINHYILYVNDNTLPQHHDTCFIEVFMCHLKAGSASAEQ-------- 170 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTID 229 + ++Q L+ + + + GD N + D + + Sbjct: 171 ATRAEQTALLRTVLDAR-PQGRHLFVCGDLNTYRSSEVCYQNLITGGASSLKDPINISGN 229 Query: 230 PNDSLIRFPKEKDSRCNANKNL-----RNKIPIDYFVMDQNAYKFLIQESFSEILYN--- 281 ++ S + D+ ++ QN ++ Y Sbjct: 230 WTNNSSFAAIHTQSPRVSGSTDCGVTGGLDDRFDHILVSQNVMNGANLLQYTTSSYKAIG 289 Query: 282 ------------------EDDIKSRGKRLSDHCPISID 301 D + SDH P+ +D Sbjct: 290 NDGNHYNQSLLTGTNSQYPDSVVRALYYSSDHLPVKLD 327 >gi|315162099|gb|EFU06116.1| exodeoxyribonuclease III [Enterococcus faecalis TX0645] Length = 251 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + LDAD LQE A Sbjct: 1 MKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S A++VR R Sbjct: 45 LELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------EAHDQEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ + + + + ++ + + Sbjct: 91 -----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK- 137 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F Sbjct: 138 PVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKFTGLLDSGFTDTFRYFYPEAEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ ++ + L+ + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246 Query: 300 IDYDF 304 + DF Sbjct: 247 VVLDF 251 >gi|229191862|ref|ZP_04318833.1| Exodeoxyribonuclease [Bacillus cereus ATCC 10876] gi|228591624|gb|EEK49472.1| Exodeoxyribonuclease [Bacillus cereus ATCC 10876] Length = 252 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 82/305 (26%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + +Y + ADI LQE+ + Sbjct: 1 MKLISWNVNGLRAVIAKGGF--------------LEYLEESSADIFCLQEIKLQEGQIDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + ++ A+ K + + D R Sbjct: 47 NLEGYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLDIEEHDQEGRL--- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +++ ++ + + + L + Sbjct: 93 ------ITLEFEDFYMITLYTPNSKRGLERLDYRMKWEDDFRSYIKRL--------DEKK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + I + + +A Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFSCILEEGFTDTYRYLYPDQESAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV+ + + + + + SDHCP+ Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEV-----------MGSDHCPVE 247 Query: 300 IDYDF 304 + +F Sbjct: 248 LHINF 252 >gi|281422472|ref|ZP_06253471.1| exodeoxyribonuclease III [Prevotella copri DSM 18205] gi|281403455|gb|EFB34135.1| exodeoxyribonuclease III [Prevotella copri DSM 18205] Length = 250 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 78/304 (25%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L G K LDAD LQE Sbjct: 1 MKFISWNVNGLRACVGKDFE---------------NQFKELDADFFCLQETKMQEG-QLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K+ + + D R Sbjct: 45 LQFEGYESYWNYAEKKGY----------SGTAIYTKHKPLNVSYGMGVEEHDHEGRI--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +++ + + + + + L ++ Sbjct: 92 ------ITLEYDQFYLVTCYTPNSQTELKRLDYRMTWEDDFRKFLKSL--------DAKK 137 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNANK 249 P +I GD N + + + ND + Sbjct: 138 PVIICGDLNVAHEEIDIKNPKTNRRNAGFTDEEREKMTVLLNDGFTDSFRYLHPDEVTYS 197 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF++ + + + + SDHCP+ + Sbjct: 198 WWSYRFKAREKNAGWRIDYFLVSDRIKEQITEAKIHTEI-----------MGSDHCPVEV 246 Query: 301 DYDF 304 D F Sbjct: 247 DLTF 250 >gi|324114357|gb|EGC08326.1| endonuclease/Exonuclease/phosphatase [Escherichia fergusonii B253] Length = 253 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 81/288 (28%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ NI+ LR + + ADIV LQE+ + V Sbjct: 9 SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P + F + + + + + H AV + S Sbjct: 59 LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A R + + GK I V+ +HL + Q L +W Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + P ++AGDFN + +D F Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKMQAGLDE-----IFTHAHGRPARTFPVQFPL 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + LSDH P+S + Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251 >gi|313618350|gb|EFR90386.1| exodeoxyribonuclease III [Listeria innocua FSL S4-378] Length = 253 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 82/303 (27%), Gaps = 78/303 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +L+SWN+N L +Y + +DADI LQE Sbjct: 4 KLISWNVNGLRAAVKKGF---------------LEYFEEVDADIFCLQETKLQEG-QIEL 47 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + +++ + ++ A+ K + Q + D+ R Sbjct: 48 DLPAYKDYWN----------YAVKKGYSGTAIFTKVEPLSVQYGLGVPEHDTEGR----- 92 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ + + +++ ++ + + +++ + P Sbjct: 93 ----VITLEFEDFYMVTVYTPN-------SQAELKRLDYRMTFEDAILEYVK-NLDKTKP 140 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 V+ GD N + + F +A Sbjct: 141 VVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAYS 200 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYFV+ + L+ + SDHCP+ + Sbjct: 201 WWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVL-----------GSDHCPVEL 249 Query: 301 DYD 303 + + Sbjct: 250 ELN 252 >gi|71280776|ref|YP_268694.1| endonuclease/exonuclease/phosphatase family protein [Colwellia psychrerythraea 34H] gi|71146516|gb|AAZ26989.1| endonuclease/exonuclease/phosphatase family protein [Colwellia psychrerythraea 34H] Length = 394 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 38/391 (9%), Positives = 99/391 (25%), Gaps = 88/391 (22%) Query: 1 MIRKYVLALVFFLVPCTA-SVAQKVRLVSWNI-----------NTLSEQEGVSLWKNSVK 48 M + ++AL+ ++ P + +++ ++N+ + ++ Sbjct: 1 MKKYSIIALIAWVFPTMTIAQETTLKIATFNVSMEALNYVAHKRGEAPNISGKTLTKALA 60 Query: 49 RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF---------------- 92 + + + ++ DI+ L E + N + Sbjct: 61 SDHQQIKNIAEIIQTVNPDIILLNEFDNQNNDHQDLKAFISHYLNKNQNGKTAIDFPYYY 120 Query: 93 -----------------YSTERLINHSKRDSNNDIHTAIAVRKKNVR-------VLQQSY 128 +L H +A+ K + Sbjct: 121 QGSVNTGVNSGMDIDGNGEKGKLPGDGYGFGYFPGHFGMALLSKYPINVDQIRTFQHFKW 180 Query: 129 PLLGAKDSFSRAGNRRAVE-----------------LLVEINGKKIWVLDIHLKSFCFLD 171 + + +A + VE+NGK I +L H F Sbjct: 181 HDMPNALMPIDPESNKAWYSQQVWQKLRLSSKSHWDVPVEVNGKTIHILASHPTPPVFDG 240 Query: 172 SLENTYSPSCSLLSQQAQWL----------KDWITQKKESLVPFVIAGDFNRKI-NYLGN 220 + + + ++ ++ FVI GD N + Sbjct: 241 PEDRNGKRNHDEIRFWQDYISPGKSSYIYDDKGNKGGIKAKQSFVILGDLNATTVDGNAI 300 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNA-------NKNLRNKIPIDYFVMDQNAYKFLIQE 273 ++ + P+ + ++ ++ +DY + + Sbjct: 301 KAGISSLLNDDKIQDAMPQSQAGEKHSPENAHGKYHTAFWRMRVDYVLPSVSGLNINNSG 360 Query: 274 SFSEILYNEDDIKSRGKRL-SDHCPISIDYD 303 F +E + ++ SDH + ++ Sbjct: 361 IFWPAETDESYRLIKDRKASSDHRLVWLELT 391 >gi|308375155|ref|ZP_07442904.2| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu007] gi|308376392|ref|ZP_07438692.2| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu008] gi|308347245|gb|EFP36096.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu007] gi|308351175|gb|EFP40026.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu008] Length = 273 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 66/305 (21%), Gaps = 66/305 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N + + + D D++ +QE + Sbjct: 6 LRLATWNVN----------------SIRTRLDRVLDWLGRADVDVLAMQETKCPDG---- 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + D +A+ + + S Sbjct: 46 ------QFPALPLFELGYDVAHVGFDQWNGVAIASRVGLDDVRVGFDGQPSWSGKPEVAA 99 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202 + I V +++ + LD TY L+D Sbjct: 100 TTEARALGATCGGIRVWSLYVPNGRALDDPHYTYKLD------WLAALRDTAEGWLRDDP 153 Query: 203 -VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P + GD+N + I Sbjct: 154 AAPIALMGDWNIAPTDDDVWSTEFFAGCTHVSEPERKAFNAIVDAQFTDVVRPFTPGP-G 212 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 ID+ + + + +GK SDH P Sbjct: 213 VYTYWDYTQLRFPKKQGMRIDFILGSPALA-------ARVMDAQIVREERKGKAPSDHAP 265 Query: 298 ISIDY 302 + +D Sbjct: 266 VLVDL 270 >gi|229544881|ref|ZP_04433606.1| exodeoxyribonuclease [Enterococcus faecalis TX1322] gi|256963841|ref|ZP_05568012.1| exonuclease III [Enterococcus faecalis HIP11704] gi|257081702|ref|ZP_05576063.1| exonuclease III [Enterococcus faecalis E1Sol] gi|257087702|ref|ZP_05582063.1| exonuclease III [Enterococcus faecalis D6] gi|257416904|ref|ZP_05593898.1| exonuclease III [Enterococcus faecalis AR01/DG] gi|257421653|ref|ZP_05598643.1| exodeoxyribonuclease [Enterococcus faecalis X98] gi|307271787|ref|ZP_07553058.1| exodeoxyribonuclease III [Enterococcus faecalis TX0855] gi|307278718|ref|ZP_07559785.1| exodeoxyribonuclease III [Enterococcus faecalis TX0860] gi|307288645|ref|ZP_07568626.1| exodeoxyribonuclease III [Enterococcus faecalis TX0109] gi|229309982|gb|EEN75969.1| exodeoxyribonuclease [Enterococcus faecalis TX1322] gi|256954337|gb|EEU70969.1| exonuclease III [Enterococcus faecalis HIP11704] gi|256989732|gb|EEU77034.1| exonuclease III [Enterococcus faecalis E1Sol] gi|256995732|gb|EEU83034.1| exonuclease III [Enterococcus faecalis D6] gi|257158732|gb|EEU88692.1| exonuclease III [Enterococcus faecalis ARO1/DG] gi|257163477|gb|EEU93437.1| exodeoxyribonuclease [Enterococcus faecalis X98] gi|295113675|emb|CBL32312.1| exodeoxyribonuclease III [Enterococcus sp. 7L76] gi|306500399|gb|EFM69735.1| exodeoxyribonuclease III [Enterococcus faecalis TX0109] gi|306504579|gb|EFM73782.1| exodeoxyribonuclease III [Enterococcus faecalis TX0860] gi|306511665|gb|EFM80664.1| exodeoxyribonuclease III [Enterococcus faecalis TX0855] gi|315025498|gb|EFT37430.1| exodeoxyribonuclease III [Enterococcus faecalis TX2137] gi|315032586|gb|EFT44518.1| exodeoxyribonuclease III [Enterococcus faecalis TX0017] gi|315143871|gb|EFT87887.1| exodeoxyribonuclease III [Enterococcus faecalis TX2141] gi|315155597|gb|EFT99613.1| exodeoxyribonuclease III [Enterococcus faecalis TX0043] gi|315165304|gb|EFU09321.1| exodeoxyribonuclease III [Enterococcus faecalis TX1302] gi|315168718|gb|EFU12735.1| exodeoxyribonuclease III [Enterococcus faecalis TX1341] gi|327535952|gb|AEA94786.1| exodeoxyribonuclease III [Enterococcus faecalis OG1RF] Length = 251 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + LDAD LQE A Sbjct: 1 MKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S A++VR R Sbjct: 45 LELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------EAHDQEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ + + + + ++ + + Sbjct: 91 -----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK- 137 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F Sbjct: 138 PVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ ++ + L+ + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246 Query: 300 IDYDF 304 + DF Sbjct: 247 VVLDF 251 >gi|212694611|ref|ZP_03302739.1| hypothetical protein BACDOR_04139 [Bacteroides dorei DSM 17855] gi|237711123|ref|ZP_04541604.1| exodeoxyribonuclease [Bacteroides sp. 9_1_42FAA] gi|237727489|ref|ZP_04557970.1| exodeoxyribonuclease [Bacteroides sp. D4] gi|265750710|ref|ZP_06086773.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_33FAA] gi|212663112|gb|EEB23686.1| hypothetical protein BACDOR_04139 [Bacteroides dorei DSM 17855] gi|229434345|gb|EEO44422.1| exodeoxyribonuclease [Bacteroides dorei 5_1_36/D4] gi|229454967|gb|EEO60688.1| exodeoxyribonuclease [Bacteroides sp. 9_1_42FAA] gi|263237606|gb|EEZ23056.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_33FAA] Length = 252 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 73/304 (24%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L L+AD LQE Sbjct: 2 LKFISWNVNGLRACYDKGF---------------ADAFNRLEADFFCLQETKMQEG-QLD 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + + D R Sbjct: 46 VQFEGYQSYWNYAEKKGY----------SGTAIFSKVKPLSVTYGLGIEEHDHEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + + L++ Sbjct: 92 -----VITLELESYYLITVYTPNSQEELRRLDYRMKWDDDFRAYLKKLEE--------KK 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + T+ + F + Sbjct: 139 PVIVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERAKFTTLLESGFTDTFRYFYPEQEGIY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ + L + SDHCP+ Sbjct: 199 SWWSYRFKAREKNAGWRIDYFLTSDSLKDKLRGAQIHTDIL-----------GSDHCPVE 247 Query: 300 IDYD 303 + + Sbjct: 248 LTIE 251 >gi|163814023|ref|ZP_02205416.1| hypothetical protein COPEUT_00176 [Coprococcus eutactus ATCC 27759] gi|158450717|gb|EDP27712.1| hypothetical protein COPEUT_00176 [Coprococcus eutactus ATCC 27759] Length = 257 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 85/303 (28%), Gaps = 78/303 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +L+SWN+N + G + ++DADI +QE Sbjct: 8 KLISWNVNGIRACAGKGFM---------------DFFNSIDADIFCIQESKMQEG-QLTL 51 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + +++ ++ ++ A+ K + + + D R Sbjct: 52 DMPGYYQYWN----------YADKKGYSGTAIFTKEKSLSETKGIGIDEHDHEGR----- 96 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ + + +++ ++ + + + + L++ P Sbjct: 97 ----VITLEYENFYMVTVYTPNSQNELARLDYRMKWEDDFRAYLKKLEE--------NKP 144 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GD N N + + + + F + N Sbjct: 145 VIVCGDMNVAHNEIDLKNPKTNRKNAGFTDEEREKMTVLLDDGFIDTFRYFYPDQENIYS 204 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF+ ++ LI SDHCP+ + Sbjct: 205 WWSYRFKAREKNAGWRIDYFLTSESLKDKLIDAKIHT-----------DIMGSDHCPVEL 253 Query: 301 DYD 303 D D Sbjct: 254 DID 256 >gi|332885681|gb|EGK05927.1| hypothetical protein HMPREF9456_02191 [Dysgonomonas mossii DSM 22836] Length = 351 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 92/298 (30%), Gaps = 63/298 (21%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 SV + +R++++NI N+ D + ++AK + DI +QE N Sbjct: 99 SVGKNIRVMTFNI----------SQNNAGNNNYDDLQAIVEFAKTENVDIFCIQEYPDNN 148 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 V K + Y T N + +A+ + + + +S Sbjct: 149 EVGDSLRKCLSFLPYYTFPE--------NVKGYLKVAIFSRYPIQNIKQMLFKNSYNS-- 198 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN--------------TYSPSCSLL 184 A+ + I K I ++ HL++ F + + + Sbjct: 199 ------AITTDLLIENKTIRLICAHLQTTNFNQKRIGSIWNTPSSLYKTISKMNVNQRIR 252 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + QA +++ I S P + GD N D F + + Sbjct: 253 ASQADLIREEIRL---STTPVIFCGDMNDTPTSYTYKTI------KKDLQDGFEECGNGI 303 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + K L + + IDY + + + SDH P+ +D Sbjct: 304 GHTYKGLFSVLRIDYILYSKEISGIKYESPKKV--------------YSDHNPVIMDL 347 >gi|312900096|ref|ZP_07759412.1| exodeoxyribonuclease III [Enterococcus faecalis TX0470] gi|311292731|gb|EFQ71287.1| exodeoxyribonuclease III [Enterococcus faecalis TX0470] Length = 251 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + LDAD LQE A Sbjct: 1 MKCISWNVNGLRAVFKKNFM---------------DVFNELDADFFCLQETK-LQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S A++VR R Sbjct: 45 LELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------EAHDQEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ + + + + ++ + + Sbjct: 91 -----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK- 137 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F Sbjct: 138 PVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ ++ + L+ + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246 Query: 300 IDYDF 304 + DF Sbjct: 247 VVLDF 251 >gi|302550593|ref|ZP_07302935.1| large secreted protein [Streptomyces viridochromogenes DSM 40736] gi|302468211|gb|EFL31304.1| large secreted protein [Streptomyces viridochromogenes DSM 40736] Length = 609 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 42/327 (12%), Positives = 92/327 (28%), Gaps = 66/327 (20%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + ++ + ++N+ L + + + K+ D+V L+E+ N Sbjct: 302 SSELAVATYNVENLDPSDDTFA---------AHAAAIVNNLKS--PDVVSLEEIQDNNGA 350 Query: 81 -----------------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 A V + S + N + +I A + V Sbjct: 351 TNDGTVAADKTLTKLIDAIVAAGGPKYDWRSIDPANNTDGGEPGGNIRQAFLFNPERVSF 410 Query: 124 LQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 ++ P A + +R+ + G+ ++V+ Sbjct: 411 TDRAGGDATTATAVTKIRGKAHLTLSPGRVAPSDEAWKNSRKPLAGEFVFRGRTVFVIAN 470 Query: 163 HLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKIN 216 H S L + Y P S + QQA + ++ + + GD N Sbjct: 471 HFNSKGGDQGLTSQYRPPSRSSETQRHQQATLVNAFVKDILDTQKNADVIALGDINDF-- 528 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKE-KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + ++ L K S + N +D ++ + + E Sbjct: 529 ---EFSRTAQLLEGRGELWSAIKSLPRSERYSYTYQGNSQVLDQILISPSIRRDCAFE-- 583 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 + ++SDH P + + Sbjct: 584 ---YDSVHINAEFNDQISDHDPQVLRF 607 >gi|290893090|ref|ZP_06556079.1| exodeoxyribonuclease [Listeria monocytogenes FSL J2-071] gi|290557450|gb|EFD90975.1| exodeoxyribonuclease [Listeria monocytogenes FSL J2-071] Length = 251 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 84/304 (27%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L +Y + +D+DI LQE Sbjct: 1 MKLISWNVNGLRAAVKKGF---------------LEYFEEVDSDIFCLQETKLQEG-QIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + Q + D+ R Sbjct: 45 LDLPAYKDYWN----------YAVKKGYSGTAIFTKVEPLSVQYGLGVPEHDTEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++ +++ ++ + + +++ + Sbjct: 91 -----VITLEFEEFFMVTVYTPN-------SQAELKRLDYRMTFEDAILEYVK-NLDKTK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + F +A Sbjct: 138 PVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + L+ + SDHCP+ Sbjct: 198 SWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVL-----------GSDHCPVE 246 Query: 300 IDYD 303 ++ + Sbjct: 247 LELN 250 >gi|21220395|ref|NP_626174.1| large secreted protein [Streptomyces coelicolor A3(2)] gi|256788480|ref|ZP_05526911.1| large secreted protein [Streptomyces lividans TK24] gi|289772371|ref|ZP_06531749.1| large secreted protein [Streptomyces lividans TK24] gi|5420017|emb|CAB46409.1| putative large secreted protein [Streptomyces coelicolor A3(2)] gi|289702570|gb|EFD69999.1| large secreted protein [Streptomyces lividans TK24] Length = 613 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 37/327 (11%), Positives = 85/327 (25%), Gaps = 64/327 (19%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 A+++ + ++N+ L + + + K+ DIV L+E+ N Sbjct: 305 SARELAVATYNVENLDPSDDTFT---------AHAETIVHRLKS--PDIVSLEEIQDNNG 353 Query: 80 VAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 V + + + +I A + V Sbjct: 354 ATDDGTVAADATVGRLIDAIVAAGGPRYDWRGIDPVDKADGGQPGGNIRQAFLFNPERVS 413 Query: 123 VLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 ++ P + + +R+ + G+ ++V+ Sbjct: 414 FTDRAGGDATTATGVRKVRGKAALTHSPGRVDPANEAWEDSRKPLAGEFVFRGRTVFVVA 473 Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215 H S L Y P S + QA+ + ++ + + V GD N Sbjct: 474 NHFNSKGGDQGLTAQYQPPSRGSETQRHAQAKVVNTFVKEILAAQKNADVVALGDINDFE 533 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 S + N +D ++ + ++ Sbjct: 534 FS----RTARILEGDGALWSAVKSLPRSERYSYVYQGNSQVLDQILVSPS-----VRRGG 584 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 + ++SDH P + + Sbjct: 585 HLSYDSVHVNAEFHDQISDHDPQVLRF 611 >gi|256854033|ref|ZP_05559398.1| exodeoxyribonuclease [Enterococcus faecalis T8] gi|307290261|ref|ZP_07570177.1| exodeoxyribonuclease III [Enterococcus faecalis TX0411] gi|256710976|gb|EEU26019.1| exodeoxyribonuclease [Enterococcus faecalis T8] gi|306498682|gb|EFM68183.1| exodeoxyribonuclease III [Enterococcus faecalis TX0411] gi|315030444|gb|EFT42376.1| exodeoxyribonuclease III [Enterococcus faecalis TX4000] Length = 251 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + LDAD LQE A Sbjct: 1 MKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S A++VR R Sbjct: 45 LELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------ETHDQEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ + + + + ++ + + Sbjct: 91 -----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK- 137 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F Sbjct: 138 PVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ ++ + L+ + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246 Query: 300 IDYDF 304 + DF Sbjct: 247 VVLDF 251 >gi|150005146|ref|YP_001299890.1| exodeoxyribonuclease [Bacteroides vulgatus ATCC 8482] gi|254883281|ref|ZP_05255991.1| exodeoxyribonuclease [Bacteroides sp. 4_3_47FAA] gi|294778957|ref|ZP_06744373.1| exodeoxyribonuclease III [Bacteroides vulgatus PC510] gi|319642656|ref|ZP_07997302.1| exodeoxyribonuclease [Bacteroides sp. 3_1_40A] gi|149933570|gb|ABR40268.1| exodeoxyribonuclease [Bacteroides vulgatus ATCC 8482] gi|254836074|gb|EET16383.1| exodeoxyribonuclease [Bacteroides sp. 4_3_47FAA] gi|294447266|gb|EFG15850.1| exodeoxyribonuclease III [Bacteroides vulgatus PC510] gi|317385744|gb|EFV66677.1| exodeoxyribonuclease [Bacteroides sp. 3_1_40A] Length = 252 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 74/304 (24%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L L+AD LQE Sbjct: 2 LKFISWNVNGLRACYDKGF---------------VDVFHRLEADFFCLQETKMQEG-QLD 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + + D R Sbjct: 46 AKFEGYHSYWNYAEKKGY----------SGTAIFSKVKPLSVTYGLGIEEHDHEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + + L++ Sbjct: 92 -----VITLELESFYLITVYTPNSQEELRRLDYRMKWEDDFRAYLKKLEE--------KK 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + T+ + F + Sbjct: 139 PVIVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERAKFTTLLESGFTDTFRYFYPEQEGIY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ + L ++ SDHCP+ Sbjct: 199 SWWSYRFKAREKNSGWRIDYFLTSDSLKDRLKGAHIYTDIF-----------GSDHCPVE 247 Query: 300 IDYD 303 + + Sbjct: 248 LTIE 251 >gi|119961356|ref|YP_946272.1| exodeoxyribonuclease III [Arthrobacter aurescens TC1] gi|119948215|gb|ABM07126.1| exodeoxyribonuclease III [Arthrobacter aurescens TC1] Length = 268 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 29/307 (9%), Positives = 75/307 (24%), Gaps = 69/307 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + + + + D D++ +QE + Sbjct: 1 MKIATWNVNSL----------------RARADRVEAWLERSDCDVLAIQETKCKDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ + Q L + Sbjct: 41 ------NFPWELFERMGYEVAHFGVNQWNGVAIASRVGLDDVQRTFLDQPAFGKAGKDPA 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--S 201 + + I + +++ + LD Y + L+ + + Sbjct: 95 QEARA-IAATCGGIRIWSLYVPNGRSLDDEHMPYK------IKWLDVLQGHAAEWVKSEP 147 Query: 202 LVPFVIAGDFNRKI-----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + GD+N + + + Sbjct: 148 TAQIALMGDWNIAPFDDDVWDIELFRNNNYTHVSEPERAAFHAFETAGFTDVVRPYTPGP 207 Query: 245 CNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 ID+ + + S D + +GK SDH Sbjct: 208 -GVYTYWDYTQLRFPKKEGMRIDFCLASPALASRVTGASI-------DREERKGKGASDH 259 Query: 296 CPISIDY 302 P+ ++ Sbjct: 260 APVIVEL 266 >gi|327395006|dbj|BAK12428.1| endonuclease/exonuclease/phosphatase [Pantoea ananatis AJ13355] Length = 371 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 74/259 (28%), Gaps = 23/259 (8%) Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 Q +L ADI+ + E S A+ + + + + I + Sbjct: 120 AQVMIDLKADILTVVEAESRPALLEFNNAMLPARQGTPFGHVMVIDGNDERGIDVGLMTG 179 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 +S+ K + +G+ + VL H KS Sbjct: 180 AGFAIDTIRSHVDDKDKQGDLIFSRDCPEFAIPLPDGQTLHVLVNHFKSK-----GYGAK 234 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFV-IAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + S + QA+ +K Q+ + + I GDFN + + + D Sbjct: 235 TLSDARRKLQAERVKAIYQQRIKEGQTLIAITGDFNDTPDS----EALAPLLKETDLKDI 290 Query: 237 FPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFS----------EILYNED 283 F EK IDY ++ +K + + Sbjct: 291 FTHEKFDNGGYPGTWGGCSASNKIDYILLSPALWKKVEKGGVWRKGMWPGVRPVKWETYP 350 Query: 284 DIKSRGKRLSDHCPISIDY 302 ++K SDH + +D Sbjct: 351 ELKKEVNAASDHAAVWVDL 369 >gi|304439168|ref|ZP_07399086.1| exodeoxyribonuclease III [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372300|gb|EFM25888.1| exodeoxyribonuclease III [Peptoniphilus duerdenii ATCC BAA-1640] Length = 254 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 83/303 (27%), Gaps = 78/303 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 + VSWN+N + ++ + L+ DI+ LQE+ Sbjct: 5 KFVSWNVNGIRAALKKGFMES---------------FEELNPDIIGLQEIKLSEG-QLDL 48 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + ++++ + + AV + + + D R Sbjct: 49 EIPGYHMYWNYAEKKGY----------SGTAVFTREEPLSVSYGIGIEEHDKEGR----- 93 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ + + + + + + + + + L + + P Sbjct: 94 ----VITLEYPEYYFITCYTPNSQRGLARLDYRMEWEEAFLEYLNRL--------DEVKP 141 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 V+ GD N N D + + F + + Sbjct: 142 VVLCGDLNVAHNEIDLKNPESNRKNAGFSDEERDKFTKLLEAGYTDTFRYLYPDKEDEYS 201 Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 IDYFV+ + +++ S + SDHCP+S+ Sbjct: 202 WWSYFRQARDRNIGWRIDYFVVSKVLEDKIVEASIHQ-----------NIMGSDHCPVSV 250 Query: 301 DYD 303 + + Sbjct: 251 ELN 253 >gi|126724355|ref|ZP_01740198.1| exodeoxyribonuclease III, putative [Rhodobacterales bacterium HTCC2150] gi|126705519|gb|EBA04609.1| exodeoxyribonuclease III, putative [Rhodobacterales bacterium HTCC2150] Length = 262 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 34/308 (11%), Positives = 76/308 (24%), Gaps = 75/308 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAV 80 L +WNIN L+ ++ D++ LQE S Sbjct: 2 PFTLATWNIN----------------SVRLREPLVCKFLAEHGPDVLCLQECKSPVDKIP 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + F + + + + +A+ K V + + A Sbjct: 46 TESFAELGYTHMI-----------ANGQKGYNGVAILSKLPIVETHRFDFADLGHARHIA 94 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 G + + + ++ + D + + Q + ++DW +K Sbjct: 95 G----------KMENGVTIHNFYVPAG--GDEPNVEKNEKFAQKLQYLKDMRDWGQSEKP 142 Query: 201 SLVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRC 245 + ++ GD N D + + + + Sbjct: 143 TKS--ILVGDLNIAPLEDDVWDHKKLLKVVSHTPLEVEKLAEVQAAADWVDVTRADIPEG 200 Query: 246 NANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ + K ++ SDH Sbjct: 201 KLYSWWSYRARDWDTADKGRRLDHVWATSDIAKSGHSS-------RVIRDARGWEKPSDH 253 Query: 296 CPISIDYD 303 PI ++D Sbjct: 254 APIITEFD 261 >gi|242239847|ref|YP_002988028.1| endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech703] gi|242131904|gb|ACS86206.1| Endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech703] Length = 253 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 32/286 (11%), Positives = 83/286 (29%), Gaps = 49/286 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++ N + LR+ +++ AD+VFLQE+ + Sbjct: 9 SFTVLTINTHKGFSPFNRRF----------ILPELREAVRSVSADVVFLQEVQGRHETHP 58 Query: 83 V----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P F + +++ + AV + ++ + ++ Sbjct: 59 LHVESWPDTPHYEFLAETMWNDYAYGRNAVYPEGDHGNAVLSRFPIFSYRNLDISLSEH- 117 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R + ++++ + + + + + +Q L + Sbjct: 118 ----ERRGLLYCVLKVPNRDLHLHVVCVHLGMSPH------------RQRQQMELLHTLL 161 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 VP V+AGDFN + + + + ++ F + + Sbjct: 162 DTIPPDVPLVVAGDFNDWLQQATPDLNRYARLEE-----VFSQHYGKPARTFPARFPLLR 216 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + LSDH P++++ Sbjct: 217 LDRIYVRN-----------VRTSAPTLLGPKPWSHLSDHAPLAVEI 251 >gi|315498514|ref|YP_004087318.1| exodeoxyribonuclease iii xth [Asticcacaulis excentricus CB 48] gi|315416526|gb|ADU13167.1| exodeoxyribonuclease III Xth [Asticcacaulis excentricus CB 48] Length = 263 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 33/303 (10%), Positives = 76/303 (25%), Gaps = 64/303 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N + L+ ++ + D+ LQE Sbjct: 1 MKIFTYNVN----------------SVNARLPLILEWFEETQPDVCALQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y + ++ +A+ K + G +R Sbjct: 35 LKCLDEKFPYEPFERLGYNAAVHGQKTWNGVALLSKQPLIDVVR----GLPGEPEDEQSR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + V I+L + + + + Y + + L+ + Sbjct: 91 YIEAVV--DGSVPVRVTSIYLPNGNPIGTDKYPYK------HRWYKRLQARAKEILAFEE 142 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTI-----------DPNDSLIRFPKEKDSRCNANK 249 V++GDFN + N N Sbjct: 143 ISVLSGDFNTIPTKSDLYRESAWLDDALYQPETRAAYQSLKNLGYSDACDLMPPEGNRYT 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A L + + SDH P+ + Sbjct: 203 FWDYQAGAWQKNEGIRIDHHLLSPQAADRLKSFEIH---KDARGRTHDDAKPSDHVPVGV 259 Query: 301 DYD 303 + D Sbjct: 260 ELD 262 >gi|110834792|ref|YP_693651.1| hypothetical protein ABO_1931 [Alcanivorax borkumensis SK2] gi|110647903|emb|CAL17379.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 315 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 32/285 (11%), Positives = 84/285 (29%), Gaps = 21/285 (7%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRT--TSDYTLLRQYA--KNLDADIVFLQEMGSYNAVA 81 L + N+ L ++ S + V + L + ++ QE+ + + Sbjct: 39 LATLNLWRLRDEHRHSKLDDPVSAMLLEARLNALADFIVVDLNAPHVLAFQEVENQIVLN 98 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + + + + + A+ R + + Sbjct: 99 RLAERL---ALLGYRYRSVLREGNDPSGMDVAVMYRSPVNIGSVGTL-FSDQRLRGHALY 154 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R + + +E V+ + + QA L +W+ ++ Sbjct: 155 SRPPLVVDIEAPLAARLVVVHWRSAK------NLKKAQVYEKRQTQAALLANWVAAQRS- 207 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 P ++AGDFN G ++ + L + + + + +D+ Sbjct: 208 --PLIVAGDFNTTWGQ-GRFSASYRRFEQAGLLNTWAELPKKSRYSFRYRCQPQALDHIW 264 Query: 262 MDQNAYKFLIQESF---SEILYNEDDIKSRGKRLSDHCPISIDYD 303 + F+ Q + Y+ +SDH + + + Sbjct: 265 VSPILKAFVNQVAVSRGHAGRYDSLYRSKGVSPVSDHDALVVYFT 309 >gi|134093694|ref|YP_001098769.1| hypothetical protein HEAR0422 [Herminiimonas arsenicoxydans] gi|133737597|emb|CAL60640.1| putative DNase I-like [Herminiimonas arsenicoxydans] Length = 337 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 44/317 (13%), Positives = 95/317 (29%), Gaps = 39/317 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTS---DYTLLRQYAKNLDADIVFLQEMGSYN 78 Q++R S+N+ L+ + + Q LDAD++ LQE+ S + Sbjct: 3 QELRFASFNVCNLALPGMKYYDDQIPYSSEEYDVKINWIAQQLDRLDADVIGLQEIFSQD 62 Query: 79 AVAKVFPK-----NTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYP 129 A+ V K + I + + L +H + + L + P Sbjct: 63 ALKDVLAKTQNYRDAQLIGFDPDPLTDHLTPSVALISRLPVSPGAVIYTELPNNLSVTLP 122 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL-----------KSFCFLDSLENTYS 178 + S R + +EI + + + + D Sbjct: 123 GVHHPVS---RFTRPILHATIEIAPDLLTHVFVCHLKSKLPDYRNDNNDDHPDQAGIAML 179 Query: 179 PSCSLLSQQAQWLKDWITQKKESLV-PFVIAGDFNRKINYLG----------NNDDFWKT 227 S A L+ ++ + P ++ GDFN + + D Sbjct: 180 RSLIRRGTDALGLRTLLSNVNKKKRLPIIVMGDFNDVASAIPTQMVMGLGKYPLDGIDDR 239 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA--YKFLIQESFSEILYNEDDI 285 + + + + + ID+ ++ + +E++Y D + Sbjct: 240 LFESYRIQSRRDALRDVGYTHVHDGIYETIDHILVSEEFNPASRAAIGEVAEVMYLNDHM 299 Query: 286 KSRGKRLSDHCPISIDY 302 + + SDH + + Sbjct: 300 TFKQPQASDHGLVLVRI 316 >gi|258648040|ref|ZP_05735509.1| exodeoxyribonuclease III [Prevotella tannerae ATCC 51259] gi|260851895|gb|EEX71764.1| exodeoxyribonuclease III [Prevotella tannerae ATCC 51259] Length = 250 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L +G R + +DAD LQE Sbjct: 1 MKFISWNVNGLRAVDGKGF---------------RDIFRAIDADFFCLQETKMQEG-QLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ + + A+ K+ + Q + D R Sbjct: 45 IAFDGYESYWNYAEKKGY----------SGTAIFTKHKPLSVQIGLGIDEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + + + + K ++ Sbjct: 91 -----VITLELDDFYLVCVYTPN-------SQDELRRLDYRMIWEEAFQAHL-HKLDAHK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + N + F A Sbjct: 138 PVIVCGDMNVAHQEIDLKNPKTNRRNAGFTDEEREKMTQLLSNGFIDTFRYFHPDLTGAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ + L++ + SDHCP+ Sbjct: 198 SWWSYRFRAREKNTGWRIDYFLVSERLKPRLVEANIH-----------NDIMGSDHCPVE 246 Query: 300 IDY 302 + Sbjct: 247 LIL 249 >gi|296165787|ref|ZP_06848295.1| exodeoxyribonuclease III [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898860|gb|EFG78358.1| exodeoxyribonuclease III [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 322 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 37/313 (11%), Positives = 76/313 (24%), Gaps = 64/313 (20%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + +RL +WN+N S + + D D++ +QE Sbjct: 46 PASPRSRSPLRLATWNVN----------------SIRSRLPRVVDWLARADVDVLAMQET 89 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + +A+ + + Sbjct: 90 KCSDG----------QFPTLPFFELGYEVAHVGFNQWNGVAIASRVGLDDVRVGFDGQPS 139 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 S A + + + +++ + L TY + L+D Sbjct: 140 WSSKPEVAATAEARALGATCDGVRIWSLYVPNGRALGDPHYTYK------LEWLAALRDT 193 Query: 195 ITQKKESLVP--FVIAGDFNRKINYL----------------GNNDDFWKTIDPNDSLIR 236 +AGD+N F +D + + Sbjct: 194 AAGWLRDDPAAQIALAGDWNIAPTDDDVWSTEFYAGATHVSEPERRAFAAIVDAQFTDVV 253 Query: 237 FPKEKDSRCNANKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 P + R + ID+ + + + +G Sbjct: 254 RPFAPGPGVYTYWDYTQLRFPKRQGMRIDFILASPALADRVTDAQIV-------REERKG 306 Query: 290 KRLSDHCPISIDY 302 K SDH P+ ID Sbjct: 307 KAASDHAPVQIDI 319 >gi|312881196|ref|ZP_07740994.1| putative phospholipase C precursor [Vibrio caribbenthicus ATCC BAA-2122] gi|309371088|gb|EFP98542.1| putative phospholipase C precursor [Vibrio caribbenthicus ATCC BAA-2122] Length = 431 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 97/297 (32%), Gaps = 36/297 (12%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +V +R++++N L + + + K D+VFLQE+ Sbjct: 159 PTTVDDGLRMMTYNTWMLPYIGQER---------DTRARYIAEAVKGY--DVVFLQEVFD 207 Query: 77 YNAVAKV-FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + F + ++ S + N S + K Q + Sbjct: 208 LGNEDTINFLMSEEYVYRSEKLTANDSNTFDG-----GVLTYSKYPI-EFQDQLVFEHCT 261 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 +G++ AV + +GK + +IHL ++ Q L+ +I Sbjct: 262 GTDCSGDKGAVYTKINHSGKAYHLFNIHLGAWNGDQHR--------QTRMAQLGELRVFI 313 Query: 196 -TQKKESLVPFVIAGDFN-RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 Q+ P ++ GDFN + +Y + + +D D P S N N Sbjct: 314 SAQQIAEHEPVIVGGDFNIDREHYPEDFQQMLRILDAYDPGESSPFRYSSDPYLNHFSLN 373 Query: 254 -------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +DY ++ ++ S ++ + + LSDH + + Sbjct: 374 NDSTAIDRERLDYVLLLKSTSPKRYINSVLPRRVFTSELWGKWE-LSDHFAVEALIE 429 >gi|189350943|ref|YP_001946571.1| exodeoxyribonuclease III [Burkholderia multivorans ATCC 17616] gi|189334965|dbj|BAG44035.1| exodeoxyribonuclease III [Burkholderia multivorans ATCC 17616] Length = 258 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 28/300 (9%), Positives = 78/300 (26%), Gaps = 68/300 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + D++ LQE Sbjct: 1 MKIATWNVNSLN----------------VRKQHVLDWLAQSAVDVLCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ + L + + Sbjct: 35 LKLPDEKFPRADLEAAGYRSWFAGQKTYNGVAILAR--DTLPFDESDVVRNIPGFEDTQQ 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + ++ + ++ + + + S + Y Q L W+ + + Sbjct: 93 RVIAVTID----GVRIVSAYFPNGQAVGSDKFLYK------MQWLDALHAWLRTEMQRYP 142 Query: 204 PFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRF----------PKEKDSRCNANK 249 + GD+N +D + P + + + Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGENLVSPQERAHFAKLIELGFVDAFRRFEQPEKTFT 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ D + ++ SDH P+ Sbjct: 203 WWDYRMFAFRRNAGLRIDHILLSPALAGSCTSCEV-------DRVPRTWEQPSDHTPVVA 255 >gi|327333158|gb|EGE74885.1| exodeoxyribonuclease III [Propionibacterium acnes HL097PA1] Length = 297 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 42/320 (13%), Positives = 80/320 (25%), Gaps = 64/320 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ S+NIN + ++ + D D++ LQE+ A + Sbjct: 1 MRIASFNINGIRAALKRGF---------------SEWMEARDCDVIGLQEVRCRPA--DL 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA---VRKKNVRVLQQSYPLLGAKDSFSRA 140 S + TA A ++ + P + + Sbjct: 44 PEGAFGDRHVSWAPGSLAGRNGVALLTRTAPAEVRSWGTHLVMAPGQAPTPAQALTGNTD 103 Query: 141 GNRRAV--------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 G + + V++ + V ++L D + Sbjct: 104 GLPTELLPFADEGRYIEVDLADTPLTVACLYLPKGATPDPANEKTIAKQDRKMAFLTGFR 163 Query: 193 DWI----TQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPND 232 D + + F++ GDFN F + P+ Sbjct: 164 DHLVRRRQECTAQGRHFLVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDT 223 Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + IDY + I D Sbjct: 224 LIDVVRAQHPDTNGPYSWWSWRGKAFVNDAGWRIDYHLASPELASKAITAEI-------D 276 Query: 284 DIKSRGKRLSDHCPISIDYD 303 S +R SDH + +DYD Sbjct: 277 RDPSYSERTSDHAAVVVDYD 296 >gi|260854081|ref|YP_003227972.1| putative DNase [Escherichia coli O26:H11 str. 11368] gi|257752730|dbj|BAI24232.1| predicted DNase [Escherichia coli O26:H11 str. 11368] gi|323155689|gb|EFZ41860.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli EPECa14] Length = 253 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 81/288 (28%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ NI+ LR + + ADIV LQE+ + V Sbjct: 9 SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P + F + + + + H AV + S Sbjct: 59 LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPKGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A R + + GK I V+ +HL + Q L +W Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + P ++AGDFN + +D F + Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + LSDH P+S + Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251 >gi|257055607|ref|YP_003133439.1| Exodeoxyribonuclease III [Saccharomonospora viridis DSM 43017] gi|256585479|gb|ACU96612.1| Exodeoxyribonuclease III [Saccharomonospora viridis DSM 43017] Length = 259 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 73/304 (24%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N T+ + + ++ D++ LQE+ + Sbjct: 1 MRIATWNVN----------------SITARLPRVLAWLRSTQPDVLCLQELKCSDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + L+ R Sbjct: 41 ------GFPRDDITELGYDVASYGANRWNGVAILSRVGLEDVTRG-LVDEPTYEDALHPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + V +++ + D TY + + L + + Sbjct: 94 AVAATC-----GGVRVWSVYVPNGREPDHPHYTYK------LRWLEALHTTVLAENSDDR 142 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF + GDFN + P+ Sbjct: 143 PFAVLGDFNIAPTDDDVWDISLFADSTHVTEPERKALARLRDAGLTDVVPRALKYD-RPY 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID ++ D + +GK SDH P+ Sbjct: 202 TYWDYRQLAFPKNRGMRIDLVYANRPFADA-------VTDAYVDREERKGKGASDHAPVV 254 Query: 300 IDYD 303 +D Sbjct: 255 VDLT 258 >gi|49476204|ref|YP_034245.1| exodeoxyribonuclease III [Bartonella henselae str. Houston-1] gi|49239012|emb|CAF28312.1| Exodeoxyribonuclease III [Bartonella henselae str. Houston-1] Length = 269 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 85/309 (27%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81 RL +WNIN + QY + ADI+ LQE +A+ Sbjct: 3 FRLATWNIN----------------SIRLRLAQIFQYLELFSADILCLQETKCPDALFPV 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K F + S + +A+ + + K F + Sbjct: 47 KAFEAAGYKYIA-----------LSGQKSYNGVAIVSRLPFKSVE-------KRFFCQKQ 88 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + VE+ GK + + + ++ + D + + + + I + Sbjct: 89 ECRYISVTVEVYGKSMRIHNFYVPAG--GDVPDADVNEKFRHKLDFLEEMSS-IQADQGD 145 Query: 202 LVPFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRC 245 V + GD N + ++ K + + + Sbjct: 146 GVSSFLVGDLNIAPLPEDVWSHKQLLKVVSHTPIETERLQALCCQGGWVDLMRMQFPVPT 205 Query: 246 NANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ + F+ + S + SDH Sbjct: 206 KLYTWWSYRARDWALADRGRRLDHIWSSPDLTSFVAELSIFRHT-------RGWNQPSDH 258 Query: 296 CPISIDYDF 304 P+ +DF Sbjct: 259 VPVQTVFDF 267 >gi|254504315|ref|ZP_05116466.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii DFL-11] gi|222440386|gb|EEE47065.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii DFL-11] Length = 237 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 74/280 (26%), Gaps = 54/280 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ S+NI K+ + L D++ LQE + Sbjct: 2 LKIGSYNIQ-----------KSIGVDARRRPDRTLKVIGELQCDVIALQEADKRFGPRES 50 Query: 84 -FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 ++ + + S AI VR+ + + L Sbjct: 51 TLNRDHILAQTNFRPVPFAVGEHSLGWHGNAILVRQGIEILDHRRIELPTL-------EP 103 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R AV + +E+ +KI V +HL S L Q D++ Sbjct: 104 RGAVTVDLEVEDQKIRVAAMHLSLIGHF------RKKQISSLMHQLHEGLDYL------- 150 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 P ++ GD N + + K E + + + +D + Sbjct: 151 -PTILIGDLNEWRDDAKSIRLLEK-----------RYEVTTPGRSFPSPLPVGSLDRIIT 198 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P+ + Sbjct: 199 SPEFTVQKAGV----------HKSKTARIASDHLPVWAEL 228 >gi|192292098|ref|YP_001992703.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1] gi|192285847|gb|ACF02228.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1] Length = 256 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 77/304 (25%), Gaps = 72/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N ++ +L + K D+V LQE+ + + Sbjct: 1 MKIATFNVNNVN----------------KRLPVLLAWLKTARPDVVCLQELKAADT---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + R ++ + +A+ + ++ L GA +R Sbjct: 41 ------DFPEAALRKAGYAAAWAGQKSWNGVAILARRREIVVTRRRLPGAP---HDKQSR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + I V ++ + + + + L +S Sbjct: 92 YIEAAV-----AGIIVGCLYAPNGNPQPGPKFDDKLA------WLKRLNRHAATLLKSGA 140 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGDFN + + Sbjct: 141 PVVLAGDFNVVPTPADIYPGKSWDKDALVQPEPRKLFAALLRQGWTDALRHSHPEDA-PY 199 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ID+ ++D + L + D SDH P Sbjct: 200 TFWSYWRNRFERDAGLRIDHLLLDPSLAARLKRAGV-------DRKVRAAPEASDHAPAW 252 Query: 300 IDYD 303 + + Sbjct: 253 VVIE 256 >gi|18310037|ref|NP_561971.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens str. 13] gi|18144716|dbj|BAB80761.1| hypothetical protein [Clostridium perfringens str. 13] Length = 256 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 44/293 (15%), Positives = 91/293 (31%), Gaps = 55/293 (18%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 +++N+ + + + W + + + K+ DI+ QE + Sbjct: 1 MTFNLKYDFKAQDNNEW-------SQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMDDLL 53 Query: 87 NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS------YPLLGAKDSFSRA 140 + + + + + D AI VL+ P + F+ + Sbjct: 54 DEYS-------WVGEDREGNGKDEFNAIFFLNNKFEVLEWDQFWLSKTPNIKGSKDFNSS 106 Query: 141 GNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R +L ++ I+G KI + + HL E ++ ++ + Sbjct: 107 LPRICTKLKLKDKISGLKIDIYNTHL-----DHESELAREEGIKIILKEVK------KNY 155 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS--------LIRFPKEKDSRCNANKN 250 P++I GDFN + D+ + I ++ + K Sbjct: 156 SIEKTPYIIMGDFNCYL-----EDNLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKG 210 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY + + + N DD K G SDH P+ + + Sbjct: 211 GYEGKIIDYILYSKE---------YEIKSLNIDDRKIDGGYPSDHYPVICELE 254 >gi|254452861|ref|ZP_05066298.1| endonuclease/exonuclease/phosphatase [Octadecabacter antarcticus 238] gi|198267267|gb|EDY91537.1| endonuclease/exonuclease/phosphatase [Octadecabacter antarcticus 238] Length = 333 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 38/331 (11%), Positives = 91/331 (27%), Gaps = 52/331 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT--------LLRQYAKNLDADIVFLQEMG 75 +++ ++N+ S + R + + L LDAD + + E Sbjct: 1 MKIATYNVEWFSNLFDNAGNLYDDDRWSGRWDVTRAQQTAALGAVFAALDADGIMVIEGP 60 Query: 76 SYNAVAKVFPKNT-WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 +A + + ++ + V + Sbjct: 61 DSHAKRDGAAALEGFAARFGLRARKAIIGYVNDTQQEILFLYDPDVLNVRHDPREDGAPR 120 Query: 135 DSFSRAG-------------NRRAVE-LLVEINGKKIWVLDIHLKSFCFLDSLENTY--S 178 + ++ +E + +G ++ +H KS + + Sbjct: 121 FDGAIKMDLNVDAEAEDVHWSKPPLELAVTHTSGTDFRLIGVHAKSKAPHGAKTDAEVMR 180 Query: 179 PSCSLLSQQAQW---LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--------- 226 S + +Q L+ + + ++ GDFN F + Sbjct: 181 ISIANRRKQLAQCIWLRRRVEAHLAAEDNLIVLGDFNDGPGLDEYEKLFGRSGVEIVLGE 240 Query: 227 -----TIDPNDSLIRFPKEKDSRCNANKNLRNKIP-----IDYFVMDQNA----YKFLIQ 272 DP+ + + A + +DY ++ Q ++ I Sbjct: 241 GEGEQLFDPHARMALSQRIGAVPVTARFTVGPDRRFLSALLDYIMVSQGVRTMGAEWAIM 300 Query: 273 ESFSE-ILYNEDDIKSRGKRLSDHCPISIDY 302 F + + + D+ + SDH P+ +D Sbjct: 301 HPFDDPKCFADKDLCAALLTASDHFPVVLDI 331 >gi|119961986|ref|YP_946639.1| 5'-nucleotidase family protein [Arthrobacter aurescens TC1] gi|119948845|gb|ABM07756.1| putative 5'-nucleotidase family protein [Arthrobacter aurescens TC1] Length = 1509 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 102/344 (29%), Gaps = 68/344 (19%) Query: 17 TASVAQKVRLVSWNINTLSEQEGV----------------SLWKNSVKRTTSDYT----- 55 A V ++L S+N+ G ++ + R ++ Sbjct: 502 AADVGGNLKLASFNVLNYFPTTGDQLAGCVFYTDREGNPITVKEGCNARGAANAENFERQ 561 Query: 56 --LLRQYAKNLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHSKRD 105 + AD+V L+E+ + +A++K+ + + + Sbjct: 562 QSKIVAAITKSGADVVSLEEIENSAQFGKNRDDALSKLVDALNVKTPGVWDYVRTPANAP 621 Query: 106 S---NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI----NGKKIW 158 + I TA +K + +S D+ + A R+ + L + + KK Sbjct: 622 PLSDEDMIRTAFIYKKAAAEPVGESII---HNDTVAFASARKPLAQLFKPVGGDDDKKFI 678 Query: 159 VLDIHLKSFCF---LDSLENTYSPSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNR 213 + H KS D + S ++QA+ L + Q + + GDFN Sbjct: 679 AIVNHFKSKGSAATPDDTDKGQGASNIARTKQAESLLAFSKDLQASKGTDKVFLIGDFNA 738 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273 N + E + ++ +D+ + A+K + Sbjct: 739 YAKEDPIN-----VLTGAGYTDL---EVGTGKHSYLFGGMVGSLDHILASPAAHKVVTGT 790 Query: 274 SFSEILYNEDDIKSRGK--------------RLSDHCPISIDYD 303 I E + R SDH P+ + + Sbjct: 791 DIWNINSVESVALEYSRYNNNVTNYYAQDEFRASDHDPVVVGLN 834 >gi|332882010|ref|ZP_08449645.1| exodeoxyribonuclease III [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332679934|gb|EGJ52896.1| exodeoxyribonuclease III [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 250 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 78/303 (25%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L ++ LDAD LQE Sbjct: 1 MKFISWNVNGLRACCEKGFKES---------------FAALDADFFCLQETKMQEG-QLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ ++ + L D R Sbjct: 45 LEFEGYRSYWNYAEKKGY----------SGTAIFSRHAPLNVTYGLGLEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E+ +++ ++ + + L ++ Sbjct: 91 ---VITLEMPD--FFLVTVYTPNSQDGLKRLDYRMQWEEAFRAYLLQL--------DTRK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F R Sbjct: 138 PVIVCGDLNVAHREIDLKNPKSNRKNAGFTDEEREKFGILLDSGFTDTFRFFYPDREGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ + L + ++ SDHCP+ Sbjct: 198 SWWSYRFKAREKNAGWRIDYFLVSKRLEAQLKSATIHTEIF-----------GSDHCPVE 246 Query: 300 IDY 302 +D Sbjct: 247 VDL 249 >gi|323358249|ref|YP_004224645.1| exonuclease III [Microbacterium testaceum StLB037] gi|323274620|dbj|BAJ74765.1| exonuclease III [Microbacterium testaceum StLB037] Length = 281 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 78/304 (25%), Gaps = 64/304 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N + T ++ D++ +QE+ Sbjct: 1 MRLATWNVN----------------SIRARVTRTVEFCVREHIDVLAMQEIKCKTE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y+ + + +A+ + + + G Sbjct: 41 ------QFPYAAFEEAGYHVAAHGLNQWNGVAIASREPLEDVEIGFPDMPGFEKGKEGPD 94 Query: 144 RAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KE 200 E + + V +++ + LD Y + L+ + K+ Sbjct: 95 LPQEARAIGATVNGVRVWSLYVPNGRGLDDPHYAYKLD------WLEKLRQYTADTLAKD 148 Query: 201 SLVPFVIAGDFNRKINYLGNNDDF-----WKTIDPNDSLIRFPKEKDSRCN--------A 247 +P + GDFN N D + P + E + Sbjct: 149 PDLPLALTGDFNIAPTDADNGDPTVVEGATTHVSPAERAAFAAFETAGLTDVVRPLIPTG 208 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 K ID+ + + + + +G+ SDH P+ Sbjct: 209 YTYWDYKQLRFPRNEGLRIDFILGSRAFADAVQGAEIH-------RDERKGEVPSDHVPV 261 Query: 299 SIDY 302 D Sbjct: 262 VADL 265 >gi|288926930|ref|ZP_06420828.1| AP endonuclease domain protein [Prevotella buccae D17] gi|288336289|gb|EFC74672.1| AP endonuclease domain protein [Prevotella buccae D17] Length = 365 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 37/300 (12%), Positives = 83/300 (27%), Gaps = 68/300 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++S+N+ S + Y ADI+ LQE A+ Sbjct: 100 TLKVLSFNVQNFGYSADGSPGDGPNP--------IVSYLARSKADIICLQEANGQVIKAE 151 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + +E L + S + + + + + Sbjct: 152 LDSVMGRLYSHHSEELKDSSGDM--------LRLYSRFPIKRVERIHYQSYGNLS----- 198 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSL------------------------ENTYS 178 V ++++NG+ + V++ HL+S + + + Sbjct: 199 ---VAYVLDVNGEDVLVVNNHLESNLLNPTDKAGFKNLVKGELGRHEARQESTHLIDKLA 255 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + Q + ++ + +P ++ GDFN + N + Sbjct: 256 AASRKRAPQVDSVAAYVARHIGR-MPVILCGDFNESPISYAHYRM------ENLLTDCYV 308 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + ID + + DD SDH PI Sbjct: 309 SAGNGPGWSYHRSGMYVRIDNIFCSDD---------WKPYQCRVDDKIKE----SDHYPI 355 >gi|86607730|ref|YP_476492.1| exodeoxyribonuclease III [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556272|gb|ABD01229.1| exodeoxyribonuclease III [Synechococcus sp. JA-2-3B'a(2-13)] Length = 261 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 85/305 (27%), Gaps = 74/305 (24%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAKVF 84 + +WN+N + + + + + D++ LQE KV Sbjct: 3 VATWNVN----------------SIRTRLPQVLAWLDSQGSLDVLCLQE-------TKVV 39 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY---PLLGAKDSFSRAG 141 ++ + + +A+ ++ + L A D + Sbjct: 40 DEDFPRAAFQERGFHVEVY---GQKSYNGVALISRDPPEKVERGFGALLPSAADLDEQKR 96 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 A+ + I +L++++ + + S + Y + LKD++ Sbjct: 97 LMSAIY-------RGIRILNLYVPNGAEVGSEKYAYK------LRWLATLKDYLAVALSQ 143 Query: 202 LVPFVIAGDFNRKINYLGNNDD--------------FWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GDFN + D + I F + + Sbjct: 144 GDPILLCGDFNIALEDRDIYDPQKAGEIMASEPERQALQEILALGFEDAFRRFTPDPGH- 202 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ + + + R ++ SDH P+ Sbjct: 203 FSWWDYRSGGFQRNRGWRIDHHYLSRELQEKATACWIDVE-------PRRAEKPSDHAPV 255 Query: 299 SIDYD 303 + D Sbjct: 256 IVALD 260 >gi|332827347|gb|EGK00107.1| hypothetical protein HMPREF9455_03573 [Dysgonomonas gadei ATCC BAA-286] Length = 382 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 38/343 (11%), Positives = 94/343 (27%), Gaps = 79/343 (23%) Query: 4 KYVLALVFFLVPCTASV----------------AQKVRLVSWNINTLSEQEGVSLWKNSV 47 KY L + ++ C + A K++++++N+ + G N Sbjct: 76 KYALIQLVVILACWQPISTCFPVHMETKEKDIPANKIKVLTYNVRGFNWLTGEKAQNNP- 134 Query: 48 KRTTSDYTLLRQYAKNLDADIVFLQE-----------MGSYNAVAKVFPKNTWCIFYSTE 96 + +Y +ADIV QE + S + ++ + Sbjct: 135 ---------IFEYVTQCNADIVCFQEFAVAAKKGKGSIISLQELNEIMKDYPYRSIIELG 185 Query: 97 RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN----RRAVEL---- 148 + + IA K P+ + + R + Sbjct: 186 KPRKTKRSYIY-----GIACYSKFPITESIKIPIQSSYNGSVIHKLEIDRRTVTLVVNHL 240 Query: 149 ---LVEINGKKIWVLDIHLKSFCFLDSL----ENTYSPSCSLLSQQAQWLKDWITQKKES 201 + KK++ + + D + ++ + + Q ++ ++ ++ Sbjct: 241 ESNRLTTEDKKLYKDFLKTRDRESFDEMANTLQDRLGAAYQIRESQVNLIRSFMDKQDAK 300 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 ++ GDFN + D + + + + ID+ + Sbjct: 301 --ATIVCGDFNDTPISYAYHTM------KGDLVDSYANSGFGQGITYHENYFWVRIDFIL 352 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + + SDH P+ F Sbjct: 353 HSRA--------------FESYNCTVDKVKYSDHYPVWTYLAF 381 >gi|320175211|gb|EFW50320.1| Endonuclease/Exonuclease/phosphatase family protein [Shigella dysenteriae CDC 74-1112] Length = 253 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 81/288 (28%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ NI LR + + ADIV LQE+ + V Sbjct: 9 SFKVLTINIQKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P + F + + + + + H AV + S Sbjct: 59 LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A R + + GK I V+ +HL + Q L +W Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + P ++AGDFN + +D F + Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + LSDH P+S + Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251 >gi|222111827|ref|YP_002554091.1| endonuclease/exonuclease/phosphatase [Acidovorax ebreus TPSY] gi|221731271|gb|ACM34091.1| Endonuclease/exonuclease/phosphatase [Acidovorax ebreus TPSY] Length = 291 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 85/313 (27%), Gaps = 61/313 (19%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEMGSYNAVAKVF 84 LV+WN +G D + QYA L D D++ LQE+ Sbjct: 3 LVTWNTQWCRGLDG-----------RVDPARIVQYAVALGDVDVLCLQEIAVNYPGLAGS 51 Query: 85 PKNTWCIFYSTERLINH-------SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 P + S + + + + + Q +PL D+ Sbjct: 52 PGDQVAQVQSALPAGWQVFFGAAVDEWTAAGRQRFGNLIATRLPVLQLQHHPLPYPPDAG 111 Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R+ R L V+ + V+ HL+ + + + + L QA Sbjct: 112 VRSMPRLCSVLTVQDPALGPVRVMTTHLEYYSKPQRM--AQALALRALHLQACAQAAQRP 169 Query: 197 QKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 Q PF V+ GDFN + + + + + +A Sbjct: 170 QGLADGSPFQPKAHTPHAVLCGDFNLQAHE-PEYAMLAAALADEEGATAGQAGQPPLWDA 228 Query: 248 N------------------KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + D+ + + + + Sbjct: 229 WRLLHPGAPQPPTFCVFDQTYAPQPLACDFIWVSDSLRSRVRAVRVDGVT---------- 278 Query: 290 KRLSDHCPISIDY 302 + SDH P+ ++ Sbjct: 279 -QASDHQPVLLEL 290 >gi|319949616|ref|ZP_08023657.1| hypothetical protein ES5_09158 [Dietzia cinnamea P4] gi|319436722|gb|EFV91801.1| hypothetical protein ES5_09158 [Dietzia cinnamea P4] Length = 319 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 36/286 (12%), Positives = 80/286 (27%), Gaps = 33/286 (11%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A + +++WNI + + + R +R + ++ QE+ + Sbjct: 32 PVPAPDLHVMTWNIR----RPVPAALTRAADRWRHRAPRVRALLASERPTVLCAQEVVAE 87 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + R + + P S+ Sbjct: 88 QIPTVLDGLGPGHDHVGRGRSADGGGEACPVFYDATRLELLGWEQSALSDTPHRAGSVSW 147 Query: 138 SRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R VE+ + I G ++ V++ HL S + A+ L + + Sbjct: 148 GNLFPRVMVEVHLRDRITGHELLVVNTHLDPL------------SARSRLRSARALLEVV 195 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWK-TIDPNDSLIRFPKEKDSRCNANKNLRNK 254 +P V+ GD N + T+ + + R + A+ + Sbjct: 196 ---AARGLPAVVTGDLNAGSSSPAVRVLLSDGTLVDSWRVARARHSEQWGTYADYRRPRR 252 Query: 255 --IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ID+ + + + + ++ G SDH + Sbjct: 253 DGARIDWILTTPDL---------TVTDAAINPLRHEGGWPSDHLAV 289 >gi|160894365|ref|ZP_02075142.1| hypothetical protein CLOL250_01918 [Clostridium sp. L2-50] gi|156864066|gb|EDO57497.1| hypothetical protein CLOL250_01918 [Clostridium sp. L2-50] Length = 262 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 36/307 (11%), Positives = 82/307 (26%), Gaps = 78/307 (25%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + ++++SWN+N + G + + K DADI +QE Sbjct: 9 STTMKMISWNVNGIRACVGKNFM---------------DFFKEADADIFCIQESKMQEG- 52 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + +++ + + A+ K + + D R Sbjct: 53 QLQLELPGYYQYWNYAEKKGY----------SGTAIFAKKEPLSVAYGIGIEEHDHEGR- 101 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 ++ + +++ ++ + + + + + L+ Sbjct: 102 --------VITLEYDNFYMVTVYTPNSQNELARLDYRMKWEDDFREYLKQLEQ------- 146 Query: 201 SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 P V+ GD N + + T+ + + F Sbjct: 147 -TKPVVVCGDMNVAHTEIDLKNPKTNRKNAGFTDEEREKFSTLLDSGFVDTFRFFNPDAE 205 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + IDYF+ + L+ + SDHC Sbjct: 206 GIYSWWSYRFKAREKNAGWRIDYFLTSKVLESRLVDAKIHTEVL-----------GSDHC 254 Query: 297 PISIDYD 303 P+ +D D Sbjct: 255 PVELDID 261 >gi|119114058|ref|XP_319013.3| AGAP009893-PA [Anopheles gambiae str. PEST] gi|116118234|gb|EAA14395.3| AGAP009893-PA [Anopheles gambiae str. PEST] Length = 413 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 39/293 (13%), Positives = 83/293 (28%), Gaps = 35/293 (11%) Query: 36 EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST 95 +G + + D DI+ LQE+ + + K+ + + Sbjct: 110 HNDGFVRCPLEALTWECRRYQVIEEIVQNDPDIICLQEVDHFKFLQKILSTQNYEGVFFP 169 Query: 96 ERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 + +N A+ +K + ++ +L S AV ++ Sbjct: 170 KPDSPCLYINGNNGPDGCAVFYKKDRLEMVNHFTRVLEVWRVQSNQVAIAAVLRTLDTQ- 228 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 ++ V HLK+ + L ++Q + L +I P ++ GDFN + Sbjct: 229 QEFCVTTTHLKA--------RKGALLSKLRNEQGKDLLYFIDGVA-ENRPVILCGDFNAE 279 Query: 215 INYLGN--------------NDDFWKTIDPNDS----LIRFPKEKDSRCNANKNLRNKI- 255 D +++ L ++ + + + Sbjct: 280 PIEPIYSTVLNYKPLGLASAYSDLLAEESQDENNQNALNTVAEQSAAYEPPYTTWKIREE 339 Query: 256 -----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY ++ F D + SDH + D + Sbjct: 340 GEVCHTIDYVFYSKDKLTVKNCLMFPSGEEIGVDRTPSFQYPSDHFSLVCDIE 392 >gi|256961018|ref|ZP_05565189.1| exonuclease III [Enterococcus faecalis Merz96] gi|293384592|ref|ZP_06630458.1| exodeoxyribonuclease III [Enterococcus faecalis R712] gi|293386821|ref|ZP_06631392.1| exodeoxyribonuclease III [Enterococcus faecalis S613] gi|312906418|ref|ZP_07765426.1| exodeoxyribonuclease III [Enterococcus faecalis DAPTO 512] gi|312979423|ref|ZP_07791111.1| exodeoxyribonuclease III [Enterococcus faecalis DAPTO 516] gi|256951514|gb|EEU68146.1| exonuclease III [Enterococcus faecalis Merz96] gi|291078138|gb|EFE15502.1| exodeoxyribonuclease III [Enterococcus faecalis R712] gi|291083824|gb|EFE20787.1| exodeoxyribonuclease III [Enterococcus faecalis S613] gi|310627572|gb|EFQ10855.1| exodeoxyribonuclease III [Enterococcus faecalis DAPTO 512] gi|311287794|gb|EFQ66350.1| exodeoxyribonuclease III [Enterococcus faecalis DAPTO 516] gi|315170467|gb|EFU14484.1| exodeoxyribonuclease III [Enterococcus faecalis TX1342] Length = 251 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + LDAD LQE A Sbjct: 1 MKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S A++VR R Sbjct: 45 LELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGV-------------EAHDQEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ + + + + ++ + + Sbjct: 91 -----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK- 137 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F Sbjct: 138 PVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ ++ + L+ + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246 Query: 300 IDYDF 304 + DF Sbjct: 247 VVLDF 251 >gi|300771464|ref|ZP_07081339.1| endonuclease/exonuclease/phosphatase family protein [Sphingobacterium spiritivorum ATCC 33861] gi|300761453|gb|EFK58274.1| endonuclease/exonuclease/phosphatase family protein [Sphingobacterium spiritivorum ATCC 33861] Length = 371 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 92/306 (30%), Gaps = 65/306 (21%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + +R++S+N++ + + + ++ D++ QE S Sbjct: 104 TAADSSIRVLSFNVHLFKTAKKGEEKDFKRE--------VLGIIDSIKPDVICFQEYYSK 155 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 V+ K F + + A+ K + Sbjct: 156 IKGKHVYAKELRENFGYKYWYFEPASVNDY--EAYGQAIFSKYPVI-------HSGTIVK 206 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN-------------------TYS 178 + G R + +E K + + ++HL+SF + ++ Sbjct: 207 NEYGINRIIYADIEKGKKSMRIYNVHLRSFALQNEDKDFIQNPSGESNKTATRRVGRKLK 266 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLI 235 + + S+QA+ LK+ I + +P+++ GDFN N S Sbjct: 267 QAFASRSEQAEALKEHIET---AKIPYMVMGDFNDTPMSYSVNLIGKGMQNAFQKKGSGW 323 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + IDY ++ +N + + ++LSDH Sbjct: 324 GVTHYEMLPIFQ---------IDYIFTSKD--------------FNILNYQIVKRKLSDH 360 Query: 296 CPISID 301 PI D Sbjct: 361 YPIWAD 366 >gi|225420139|ref|ZP_03762442.1| hypothetical protein CLOSTASPAR_06482 [Clostridium asparagiforme DSM 15981] gi|225041196|gb|EEG51442.1| hypothetical protein CLOSTASPAR_06482 [Clostridium asparagiforme DSM 15981] Length = 251 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 78/303 (25%), Gaps = 78/303 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +L+SWN+N L G Y K DAD+ LQE Sbjct: 3 KLISWNVNGLRACVGKGF---------------LDYFKEADADVFCLQETKLQEG-QIDL 46 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + +++ + + + A+ K V + + D R Sbjct: 47 DLPGYHQYWNYAQKKGY----------SGTAMFTKEEPVSVRYGLGIEEHDMEGR----- 91 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ ++ +V+ + + + + + + L++ P Sbjct: 92 ----VIAAEFQEYFVVTCYTPNSQDGLARLDYRMEWENAFLAYLKKLEE--------EKP 139 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + GD N + + + F R Sbjct: 140 VIFCGDLNVAHKEIDLKNPKSNRKNAGFTDEERGKFTDLLGAGFIDTFRYFYPDREGIYS 199 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF ++ L+ + SDHCP+ + Sbjct: 200 WWSYRFSARAKNAGWRIDYFCASESLKDRLVSADIHTEV-----------MGSDHCPVEL 248 Query: 301 DYD 303 + Sbjct: 249 VIE 251 >gi|307153787|ref|YP_003889171.1| exodeoxyribonuclease III [Cyanothece sp. PCC 7822] gi|306984015|gb|ADN15896.1| exodeoxyribonuclease III [Cyanothece sp. PCC 7822] Length = 264 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 32/305 (10%), Positives = 90/305 (29%), Gaps = 67/305 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ +WN+N + + + D++ LQE + + Sbjct: 1 MKIATWNVN----------------SIRIRQQQVSHWLQMNPVDVLCLQETKVIDADFPK 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 F + + ++ S + + +A+ + + A Sbjct: 45 MPFEELGYHLYISGQPS------------YNGVALLSRQPLEDVRIGFTQVLGVDDVLAA 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++ + ++++++ + L S + Y Q + L++++T KE+ Sbjct: 93 TFDQQKRVISGIFHDVRIVNLYVPNGADLSSDKYAYK------LQWLKMLRNYLTLFKEN 146 Query: 202 -LVPFVIAGDFNRKINYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCN 246 + GDFN ++ K L ++ + Sbjct: 147 YPQELCVCGDFNVAPEDKDIHNPKGKETHIMATPQERKALQEVLEIGLKDAFRKFTAEGG 206 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ + Y+ + ++ + SDH P Sbjct: 207 HYSWWDYRSGGFQRNRGWRIDHHFLTPKLYEQATSCTIDIEPRKQE-------KPSDHTP 259 Query: 298 ISIDY 302 + +++ Sbjct: 260 VIVEF 264 >gi|237746873|ref|ZP_04577353.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gi|229378224|gb|EEO28315.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 321 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 49/319 (15%), Positives = 101/319 (31%), Gaps = 39/319 (12%) Query: 22 QKVRLVSWNINTLSEQE---GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 Q++RL ++N+ L E L + + + + + DAD++ QE+ S Sbjct: 3 QEIRLATFNVRNLVLPEIAYYDDLPPYTQEEYEAKTAWIAEKIDQSDADVIGFQEIFSKQ 62 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-------NVRVLQQSYPLL 131 A+ V K + + + A+ R + +Q L Sbjct: 63 ALNDVVAKTRHYREAHLI-CFDRNHLPAALKPQVALLSRFPLAGSPQTHQLFPRQFQITL 121 Query: 132 GAKDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 D+ +R +E + NG+ + + +HLKS S + Sbjct: 122 PITDTLINRFSRPVLEAPVFLPNGQILNIYVVHLKSKRPDFVSFVNKSDPYQYGLAALRS 181 Query: 191 LKDWITQ-----------KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS------ 233 L ++ + +P I GDFN + + + Sbjct: 182 LMRRAADALGVRALVAEFRQNNALPIAILGDFNDFSLAVSTRIVTGEEHESEQPLSPFYR 241 Query: 234 -LIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKF--LIQESFSEILYNEDDI 285 F + D + N + ID+ + + + + +++Y ++D Sbjct: 242 LYDCFEIQSDPDHHMNNLSQFLEENGTPRIDHIFVSEEFTEESGFLTGKIKKMVYLQNDG 301 Query: 286 KSRGKRLSDH--CPISIDY 302 LSDH ++I+ Sbjct: 302 DPDNPELSDHSLALVTIEL 320 >gi|50843350|ref|YP_056577.1| exodeoxyribonuclease III [Propionibacterium acnes KPA171202] gi|50840952|gb|AAT83619.1| exodeoxyribonuclease III [Propionibacterium acnes KPA171202] gi|315106020|gb|EFT77996.1| exodeoxyribonuclease III [Propionibacterium acnes HL030PA1] Length = 297 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 42/320 (13%), Positives = 80/320 (25%), Gaps = 64/320 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ S+NIN + ++ + D D++ LQE+ A + Sbjct: 1 MRIASFNINGIRAALKRGF---------------SEWMEARDCDVIGLQEVRCRPA--DL 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA---VRKKNVRVLQQSYPLLGAKDSFSRA 140 S + TA A ++ + P + + Sbjct: 44 PEGAFGDRHVSWAPGSLAGRNGVALLTRTAPAEVRSWGTHLVMAPGQAPTPAQALTGNTD 103 Query: 141 GNRRAV--------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 G + + V++ + V ++L D + Sbjct: 104 GLPTELLPFADEGRYIEVDLADTPLTVACLYLPKGATPDPANEKTIAKQDRKMAFLTGFR 163 Query: 193 DWI----TQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPND 232 D + + F++ GDFN F + P+ Sbjct: 164 DHLVRRRQECTTQGRHFLVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDT 223 Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + IDY + I D Sbjct: 224 LIDVVRAQHPDTNGPYSWWSWRGKAFVNDAGWRIDYHLASPELASKAITAEI-------D 276 Query: 284 DIKSRGKRLSDHCPISIDYD 303 S +R SDH + +DYD Sbjct: 277 RDPSYSERTSDHAAVVVDYD 296 >gi|88860007|ref|ZP_01134646.1| exodeoxyribonuclease III [Pseudoalteromonas tunicata D2] gi|88818001|gb|EAR27817.1| exodeoxyribonuclease III [Pseudoalteromonas tunicata D2] Length = 267 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 33/309 (10%), Positives = 78/309 (25%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L+ + D++ LQE+ ++ Sbjct: 1 MKIISFNINGL----------------RARLHQLQALIEKHQPDVIGLQEIKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K + + G A R Sbjct: 42 -------FPLADVEAMGYHVYFHGQKAHYGVAMLCKKEPLSIEK----GFPTDTDEAQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + G+ + +++ F + Q + L ++ + + Sbjct: 91 MITVTIEDEQGQPVKIMN-----GYFPQGDSIHHETKFPYKEQFYKDLMTYLASQDPASQ 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 V+ GD N ++ + + F + Sbjct: 146 -LVVMGDINISPLDKDIGIGEVNAKRWLKTGKCSFQPIERQWLADLMAWGFTDTFRQIHP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + ID + + + D + S Sbjct: 205 DTNAHFSWFDYRSKGFDDNRGLRIDVILATASLAARCVDAGI-------DYELRAIDKPS 257 Query: 294 DHCPISIDY 302 DH PI + Sbjct: 258 DHAPIWASF 266 >gi|262372803|ref|ZP_06066082.1| nuclease [Acinetobacter junii SH205] gi|262312828|gb|EEY93913.1| nuclease [Acinetobacter junii SH205] Length = 812 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 50/326 (15%), Positives = 96/326 (29%), Gaps = 50/326 (15%) Query: 20 VAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGS 76 + +R ++N+ N + G + + + D + K++DAD+ L E+ + Sbjct: 461 QTKHIRAAAFNVLNYDKGKNGFPTERGANSQAEFDKQHAKIISALKSIDADVYGLMEIAN 520 Query: 77 YNAVAKVFPKNTWCIFYSTERL--INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + I AI K V+ + ++ L Sbjct: 521 NGYGSDSAVAYLTKALGPDWKYVIPESINQLGTDVIAVAIIYNSKRVQPVNKAAVL---- 576 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS--------LLSQ 186 D + + A G+ V+ HLKS N+ + Sbjct: 577 DLGEKNRSTIAQSFKPVHGGQIFTVIPNHLKSKSCSGVDLNSLDADQKDGQGCWNPTRVK 636 Query: 187 QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + L WI + ++ GD N D N ++ + Sbjct: 637 AVEQLTQWIAKNPTQVKNPNILLLGDMN----SYAKEDPILAFEKANYKVLLNDSKIGEG 692 Query: 245 CNANKN----------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----- 289 NA +D+ + D N YK +++ I +E + Sbjct: 693 TNAYSYVFGVSSNSDGYGGAGNLDHAIADANLYKRVVKAFAWHINADEPTVLDYNEEYKT 752 Query: 290 ------------KRLSDHCPISIDYD 303 R SDH P+ +D D Sbjct: 753 DEQKELFFAADPYRSSDHDPVIVDLD 778 >gi|300860584|ref|ZP_07106671.1| exodeoxyribonuclease III [Enterococcus faecalis TUSoD Ef11] gi|300849623|gb|EFK77373.1| exodeoxyribonuclease III [Enterococcus faecalis TUSoD Ef11] Length = 251 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + LDAD LQE A Sbjct: 1 MKCISWNVNGLRAVVKKNF---------------LDVFNELDADFFCLQETK-LQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S A++VR R Sbjct: 45 LELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------EAHDQEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ + + + + ++ + + Sbjct: 91 -----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK- 137 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F Sbjct: 138 PVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ ++ + L+ + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246 Query: 300 IDYDF 304 + DF Sbjct: 247 VVLDF 251 >gi|228959948|ref|ZP_04121613.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar pakistani str. T13001] gi|228799691|gb|EEM46643.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar pakistani str. T13001] Length = 252 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + +Y + ADI LQE+ + Sbjct: 1 MKLISWNVNGLRAVIAKGGF--------------LEYLEESSADIFCLQEIKLQEGQIDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + ++ A+ K + + D R Sbjct: 47 NLEGYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRL--- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +++ ++ + + + L + Sbjct: 93 ------ITLEFEDFYMITLYTPNSKRGLERLDYRMKWEDDFRSYIKRL--------DEKK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + I + + ++ A Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFSCILEEGFIDTYRYLYPNQEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV+ + + + + + SDHCP+ Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEV-----------MGSDHCPVE 247 Query: 300 IDYDF 304 + +F Sbjct: 248 LHINF 252 >gi|227519480|ref|ZP_03949529.1| exodeoxyribonuclease [Enterococcus faecalis TX0104] gi|227073092|gb|EEI11055.1| exodeoxyribonuclease [Enterococcus faecalis TX0104] gi|315151770|gb|EFT95786.1| exodeoxyribonuclease III [Enterococcus faecalis TX0012] Length = 251 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 77/305 (25%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + LDAD LQE A Sbjct: 1 MKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S A++VR R Sbjct: 45 LELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------EAHDQEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ + + + ++ + + Sbjct: 91 -----VITLEYPEFFIVTCYTPN-------SQAELKRLAYRMTWEDAFSAYLNELNQEK- 137 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F Sbjct: 138 PVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ ++ + L+ + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246 Query: 300 IDYDF 304 + DF Sbjct: 247 VVLDF 251 >gi|295839581|ref|ZP_06826514.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. SPB74] gi|197696835|gb|EDY43768.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. SPB74] Length = 614 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 34/329 (10%), Positives = 78/329 (23%), Gaps = 69/329 (20%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQ 72 ++ + ++N+ L + + + L DIV ++ Sbjct: 302 SAKPGADGELSVATYNVENLDPGDP-----------QAKFDALADGVVTHLASPDIVSIE 350 Query: 73 EMGSYNAVAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 E+ N V + + + + +I Sbjct: 351 EVQDDNGAKDDGTVSAELTLREFTDAIVAKGGPRYAWRGIDPENDKDGGEPGGNIRQVFL 410 Query: 116 VRKKNVRVLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEING 154 V ++ P + + +R+ + G Sbjct: 411 YNPDRVSFTDRTGGDATTATAVVEREGSPALAVSPGRVDPANPAWEDSRKPLAGEFVFRG 470 Query: 155 KKIWVLDIHLKSFCFLDSLENTY----SPSCSLLSQQAQWLKDWITQ--KKESLVPFVIA 208 +K++V+ H S + L S + QA + ++ Q ++ V+ Sbjct: 471 EKVFVVANHFSSKGGDEPLTAERQPPVRASETRRHAQAASVNAFVRQLTALDAKARVVVL 530 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 GD N + N +D ++ + Sbjct: 531 GDLNDFEFSATTK----ALTKGKVLRPGIERLPADERYTYVYQGNSQVLDQILVSKGITS 586 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCP 297 F + + + SDH P Sbjct: 587 FTYDSVHINAEFAQQN--------SDHDP 607 >gi|301163534|emb|CBW23085.1| exodeoxyribonuclease [Bacteroides fragilis 638R] Length = 253 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 32/305 (10%), Positives = 87/305 (28%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++++N+N L L ++ + D++ LQE + A Sbjct: 1 MKIITYNVNGLRAAVNKGLP---------------EWLAEENPDVLCLQETKLQPEQYPA 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F + + + + + + +A+ K + G Sbjct: 46 EAFEALGYKAYLYSAQKKGY----------SGVAILTKVEP----DHIEYGMGIEEYDNE 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + + V+ ++ S D + + + + ++T+ ++S Sbjct: 92 GRF-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEAFQKYVTELRKS 139 Query: 202 LVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ GD+N + + + + Sbjct: 140 RPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLSAGFIDSFRTLYPQKQE 199 Query: 246 NANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + R IDY ++ + L + + SDHCP+ Sbjct: 200 YTWWSYRFNSRAKNKGWRIDYCMVSEPVRSLLKEAVILNNAVH-----------SDHCPM 248 Query: 299 SIDYD 303 +++ Sbjct: 249 ALEIS 253 >gi|229111211|ref|ZP_04240765.1| Exodeoxyribonuclease [Bacillus cereus Rock1-15] gi|229146311|ref|ZP_04274682.1| Exodeoxyribonuclease [Bacillus cereus BDRD-ST24] gi|296504242|ref|YP_003665942.1| exodeoxyribonuclease III [Bacillus thuringiensis BMB171] gi|228636944|gb|EEK93403.1| Exodeoxyribonuclease [Bacillus cereus BDRD-ST24] gi|228672205|gb|EEL27495.1| Exodeoxyribonuclease [Bacillus cereus Rock1-15] gi|296325294|gb|ADH08222.1| exodeoxyribonuclease III [Bacillus thuringiensis BMB171] Length = 252 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + +Y + ADI LQE+ + Sbjct: 1 MKLISWNVNGLRAVIAKGGF--------------LEYLEESSADIFCLQEIKLQEGQIDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + ++ A+ K + + D R Sbjct: 47 NLEGYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRL--- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +++ ++ + + + L + Sbjct: 93 ------ITLEFEDFYMITLYTPNSKRGLERLDYRMKWEDDFRSYIKRL--------DEKK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + I + + ++ A Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRENPGFSDEEREKFSCILEEGFIDTYRYLYPNQEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV+ + + + + + SDHCP+ Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEV-----------MGSDHCPVE 247 Query: 300 IDYDF 304 + +F Sbjct: 248 LHINF 252 >gi|218549643|ref|YP_002383434.1| metal-dependent hydrolase [Escherichia fergusonii ATCC 35469] gi|218357184|emb|CAQ89819.1| putative metal-dependent hydrolase [Escherichia fergusonii ATCC 35469] Length = 253 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 44/295 (14%), Positives = 83/295 (28%), Gaps = 53/295 (17%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + ++++ NI+ LR + + ADIV LQE+ Sbjct: 2 PVQTQQFSFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVM 51 Query: 76 SYNAVAKV----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 + V + +P + F + + + + + H AV + Sbjct: 52 GAHEVHPLHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----H 106 Query: 130 LLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 S A R + + GK I V+ +HL + Q Sbjct: 107 YENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQ 153 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 L +W+ + P ++AGDFN + +D F + Sbjct: 154 LAMLAEWVNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPART 207 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + LSDH P+S + Sbjct: 208 FPVQFPLLRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251 >gi|254255473|ref|ZP_04948789.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158] gi|124901210|gb|EAY71960.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158] Length = 401 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 81/285 (28%), Gaps = 66/285 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----- 75 + +R+ ++NI + + + LDAD++ LQE+ Sbjct: 164 GRDLRIATYNI-----------GGGYGTWSVPAADRIAAVIEELDADVIALQEVPLGGTH 212 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + +A + AV + ++ L Sbjct: 213 APDVLAHLRDATGMHAVAGPTIDTPE--------RRYGNAVLSRCPIRAARTLDL----- 259 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 SF + R A++ ++ I V+ HL S S S Q Q L + Sbjct: 260 SFHQREPRGALDADIDCIAGPIRVVATHLGL-------------SASERSAQVQRL---L 303 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 +P ++ GD N + F + + RF + R Sbjct: 304 AAFDTGAMPVILLGDIN---------EWFVRGRALQALVTRFRRAPAPRTFPTVCPVF-- 352 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +D + ++ +R + SDH P+ Sbjct: 353 ALDRIWVHPG----------ELLVDVVVHRSARARHASDHYPLVA 387 >gi|153006976|ref|YP_001381301.1| exodeoxyribonuclease III Xth [Anaeromyxobacter sp. Fw109-5] gi|152030549|gb|ABS28317.1| exodeoxyribonuclease III Xth [Anaeromyxobacter sp. Fw109-5] Length = 248 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 31/303 (10%), Positives = 76/303 (25%), Gaps = 80/303 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N + + ++ D+V LQE+ + A Sbjct: 1 MKIGTWNVNG----------------IRAREAQVAEWIAREHPDVVCLQEIKAPPA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S L + ++ + + + ++ R Sbjct: 41 ------RVPPSLCELEGYWCLWHGATAYSGVGLHVRRELAAER----PAFTHPDFDLETR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 AV + + V +++ + + + L W+ + Sbjct: 91 IAVAEV-----AGVTVASVYVPNGG----------KDYPAKLRFLEALDRWVEAACAAGR 135 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGD N + ++ I + + + Sbjct: 136 PLVVAGDLNVARTDQDVHPKERKAGAIGQRPDERAVFERILSHGLVDLGRAMDPTNEGLF 195 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDY ++ + + + SDH P+ Sbjct: 196 TYWAPWRNLRQRNIGWRIDYVLVSAALARRATRCAVL-----------ADFGTSDHAPLV 244 Query: 300 IDY 302 + Sbjct: 245 AEL 247 >gi|70732070|ref|YP_261826.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens Pf-5] gi|68346369|gb|AAY93975.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens Pf-5] Length = 258 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 34/290 (11%), Positives = 77/290 (26%), Gaps = 52/290 (17%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--G 75 A +++++ NI+ LR ++ D+VFLQE+ Sbjct: 12 APAVASLKVLTLNIHKGFTFLNRRF----------ILPQLRDAVRSTGTDLVFLQEVLGD 61 Query: 76 SYNAVAKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + + S + + + A+ K + Q+ + Sbjct: 62 HSQHAKRFGNWPQQPHYEFLADSMWHEFAYGRNAVYPEGEHGNALLSKYPILSHQNLDVS 121 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 D R + ++ + G+++ + +HL + Q + L Sbjct: 122 QQGD-----EQRGLLHSVLAVPGREVHAICVHLGLR-------------EAHRWHQLRLL 163 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 + ++AGDFN + F + + Sbjct: 164 CALVRG-LPPRATVIVAGDFNDW------RRRADALLAQQGLHEAFVRHGGRPARSFPAR 216 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + +D + LSDH P++++ Sbjct: 217 WPLLRLDRIYVRNAR-----------TCAPRVLSTRPWSHLSDHAPLAVE 255 >gi|283850748|ref|ZP_06368035.1| exodeoxyribonuclease III Xth [Desulfovibrio sp. FW1012B] gi|283573991|gb|EFC21964.1| exodeoxyribonuclease III Xth [Desulfovibrio sp. FW1012B] Length = 254 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 75/302 (24%), Gaps = 76/302 (25%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L+SWN+N L W ++ AD+V +QE F Sbjct: 3 LMSWNVNGLRAVVQKGFW---------------EWLSGSGADVVGIQESKLQTGHEADFG 47 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 T + ++ + + L D+ R Sbjct: 48 --------HTGGYKTVWLSSTVKKGYSGVGCLYRVEPRSIG----LDLPDAAWCGEGRL- 94 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 +++ + +++ + A+ L+ P Sbjct: 95 ----IQMEFNDFYFFNVYFPNGGRGPERLAYKLGYYEAFLAHAEALRR--------KKPI 142 Query: 206 VIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 V+ GDFN +L + + F + + Sbjct: 143 VVCGDFNTAHTALDLKNAKANEKTSGFLPEERAWLDGFVAAGYVDTFRMFEKEGGH-YSW 201 Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + IDYF + + + + ++ SDHCP+ ++ Sbjct: 202 WDYRFKARDRNVGWRIDYFFVSEELRPRVKRAWIDNTVF-----------GSDHCPVGLE 250 Query: 302 YD 303 D Sbjct: 251 ID 252 >gi|260593320|ref|ZP_05858778.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella veroralis F0319] gi|260534732|gb|EEX17349.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella veroralis F0319] Length = 362 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 47/351 (13%), Positives = 101/351 (28%), Gaps = 64/351 (18%) Query: 2 IRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSE-------QEGVSLWKNSVKRT 50 +RK + AL+ L+ T++ AQK + +N L + + S Sbjct: 16 MRKLLFALICTLLVGTSASAQKKFSVYAVGFYNQENLFDCTHDEGKNDYDFTPNGSYHWN 75 Query: 51 T----SDYTLLRQYAKNLDAD--------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + + D ++ L E+ + + + + + + Sbjct: 76 EMKYSHKLHNMSTVLAEMGTDVLPNVGCAVIGLAEVENNHVMRDLVAQP---ALAARGYK 132 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 H + + I A+ + P + S R + + + G+ + Sbjct: 133 FVHIEGPDHRGIDCALIYNPNLFTIRNTKLVPYVYDLPQDSTRATRGFLTVSGTLAGEHL 192 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 V+ HL S S L ++Q + LKD + + V ++ GD N Sbjct: 193 TVVVCHLPSR-------RASSYYRELGAKQVKALKDSL-LLNDPQVKVLVMGDMNDDPTN 244 Query: 218 LGNNDDFWKTID------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 ++ + + + + D +M N Sbjct: 245 ESIHECLSAKAEINEVGADDMYNPWYNLLVKEGTGTLQYQGKWNLFDQIIMTPNLLNKDG 304 Query: 272 QESFSEILYNEDDIKSRGK-----------------------RLSDHCPIS 299 ++ FS++ + ++ I R SDH P+ Sbjct: 305 KKDFSQLKFWKNQIFRRDYLFQETGKYKGNTKRTTAGGVWLDGYSDHLPVV 355 >gi|161524301|ref|YP_001579313.1| exodeoxyribonuclease III Xth [Burkholderia multivorans ATCC 17616] gi|221214798|ref|ZP_03587767.1| exodeoxyribonuclease III [Burkholderia multivorans CGD1] gi|160341730|gb|ABX14816.1| exodeoxyribonuclease III Xth [Burkholderia multivorans ATCC 17616] gi|221165337|gb|EED97814.1| exodeoxyribonuclease III [Burkholderia multivorans CGD1] Length = 272 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 28/300 (9%), Positives = 78/300 (26%), Gaps = 68/300 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + D++ LQE Sbjct: 15 MKIATWNVNSLN----------------VRKQHVLDWLAQSAVDVLCLQE---------- 48 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ + L + + Sbjct: 49 LKLPDEKFPRADLEAAGYRSWFAGQKTYNGVAILAR--DTLPFDESDVVRNIPGFEDTQQ 106 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + ++ + ++ + + + S + Y Q L W+ + + Sbjct: 107 RVIAVTID----GVRIVSAYFPNGQAVGSDKFLYK------MQWLDALHAWLRTEMQRYP 156 Query: 204 PFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRF----------PKEKDSRCNANK 249 + GD+N +D + P + + + Sbjct: 157 KLALLGDYNIAPEDRDVHDPAKWEGENLVSPQERAHFAKLIELGFVDAFRRFEQPEKTFT 216 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ D + ++ SDH P+ Sbjct: 217 WWDYRMFAFRRNAGLRIDHILLSPALAGSCTSCEV-------DRVPRTWEQPSDHTPVVA 269 >gi|17986352|ref|NP_538986.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M] gi|189025067|ref|YP_001935835.1| Exodeoxyribonuclease III [Brucella abortus S19] gi|237816360|ref|ZP_04595353.1| exodeoxyribonuclease III (xth) [Brucella abortus str. 2308 A] gi|297247235|ref|ZP_06930953.1| exodeoxyribonuclease III [Brucella abortus bv. 5 str. B3196] gi|17981940|gb|AAL51250.1| exodeoxyribonuclease iii [Brucella melitensis bv. 1 str. 16M] gi|189020639|gb|ACD73361.1| Exodeoxyribonuclease III [Brucella abortus S19] gi|237788427|gb|EEP62642.1| exodeoxyribonuclease III (xth) [Brucella abortus str. 2308 A] gi|297174404|gb|EFH33751.1| exodeoxyribonuclease III [Brucella abortus bv. 5 str. B3196] Length = 289 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 79/309 (25%), Gaps = 68/309 (22%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + + +WNIN L+ Q+ ++ D++ LQE Sbjct: 21 SMAFSIATWNIN----------------SVRLRMPLVEQFLRDYQPDVLCLQETKCP--- 61 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +FP + S + +A + + D Sbjct: 62 DDLFPAKGFRAL------GYEHIAISGQKGYHGVATVSRRPLDGVEKVDFCNMGDCRH-- 113 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + +VE +K+ + + ++ + D + +P + + ++ I +K+ Sbjct: 114 -----LSAVVEAGDRKLRIHNFYVPAG--GDEPDPEINPKFAHKLAFLEEMRAIIADRKD 166 Query: 201 SLVPFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSR 244 ++ GD N N + ++ K + + Sbjct: 167 -GCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRIKGGWSDLMRHLIAAD 225 Query: 245 CNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + +D+ + R SD Sbjct: 226 QKIYTWWSYRAKDWDAADRGRRLDHVWGSADLES-------HNKGLQVLRDARGWDRPSD 278 Query: 295 HCPISIDYD 303 H P+ +D Sbjct: 279 HVPVIATFD 287 >gi|194292799|ref|YP_002008706.1| exodeoxyribonuclease iii, ap endonuclease, family 1 [Cupriavidus taiwanensis LMG 19424] gi|193226703|emb|CAQ72654.1| Exodeoxyribonuclease III, AP endonuclease, family 1 [Cupriavidus taiwanensis LMG 19424] Length = 270 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 72/305 (23%), Gaps = 70/305 (22%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +++ ++NIN S L + DIV LQE+ + + Sbjct: 3 ASTLKIATFNING----------------IRSRVGALCHWLAREAPDIVCLQELKTADE- 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 R + +A+ + ++ L G D Sbjct: 46 ---------SFPAREIRDAGYGAIWHGQKSWNGVAILARGEEPVEVRRGLPGDPDDSHSR 96 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 AV + + ++L + + Y + + L + Sbjct: 97 YLEAAVS--------GLLIACLYLPNGNPQPGPKFDYKLA------WFERLIAHAQELFG 142 Query: 201 SLVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRC 245 S P V+AGD+N D + + + Sbjct: 143 SGHPVVLAGDYNVVPTDQDIYNPRSWRKDALLQPESRDAYARLLAQGWTDALRQRHPDAP 202 Query: 246 NANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ ++ L D SDH P Sbjct: 203 VYTFWDYFRQHWQTNSGLRIDHILLSAELAPRLRDAGV-------DRWVRGEDHPSDHAP 255 Query: 298 ISIDY 302 + Sbjct: 256 AWVVL 260 >gi|170076537|ref|YP_001733176.1| endonuclease/exonuclease/phosphatase family protein [Synechococcus sp. PCC 7002] gi|169887399|gb|ACB01107.1| Endonuclease/Exonuclease/phosphatase family [Synechococcus sp. PCC 7002] Length = 1686 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 41/359 (11%), Positives = 87/359 (24%), Gaps = 77/359 (21%) Query: 17 TASVAQKVRLVSWNINTLS-----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 V +++ S+N+ ++ + L ++ Sbjct: 476 APDVGGSLKVASFNVLNFFTSLGDENLTSGPDGLDPRGADNQEEFDRQVAKLVSALAEIE 535 Query: 66 ADIVFLQEMGSY----------------NAVAKVFPKNTWCIFYSTERLINHSK---RDS 106 AD+ L E+ + +A+ V P + + Sbjct: 536 ADVFGLVELENEFGDVNGDGEFAIGFLADALNAVIPGANYQYVDPGTDYVGTDAIAVGFI 595 Query: 107 NNDIHTAIAVRKKNVRVLQQSYP----LLGAKDSFSRAGNRRAVELLVE--INGKKIWVL 160 N IA + G +R + + E G+ + Sbjct: 596 YNANTVGIAEGTTVAVLSDSDLAGLGVDPGNPVFDGSGTSRNPIAVTFEELATGETFTAV 655 Query: 161 DIHLK-----SFCFLDSLENTYSPSCSLLSQQAQ-WLKDWITQKK--ESLVPFVIAGDFN 212 + H K S ++ + + + QA + W+ F+I GD N Sbjct: 656 NNHFKSKGSVSPFGNNAGTGDGTGNNNEARLQAAIAVNAWLDTDPTGSGDSDFLILGDLN 715 Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-----------KIPIDYFV 261 + + + K + +DY + Sbjct: 716 AYGMEDPI-----QYLLDEGYVDTIEKFLPDGESIYSFGFPLDLETSPQVQAFGALDYAL 770 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRG-----------------KRLSDHCPISIDYD 303 +++ ++ + I +E R SDH P+ I D Sbjct: 771 ANESLASQVVDAAEWHINADEASAFDYNTNFKPQAQIDGLFGANPFRSSDHDPLIIGLD 829 >gi|290892528|ref|ZP_06555521.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL J2-071] gi|290557837|gb|EFD91358.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL J2-071] Length = 256 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 75/285 (26%), Gaps = 35/285 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + ++NI K TL + D + ++E + Sbjct: 2 FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEEPLLPQMLDMK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + W F + ++ + P + + S + R Sbjct: 55 AMLD-WDYFGVGRDDGLEKGEFTAVFYNSTRFTLLQEGHFWLSDTPDVPSIHSTAM-FPR 112 Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V + +GK+ ++ + HL A L Sbjct: 113 ICVWGKFADSDGKQFYLFNTHLDHIS-------------EEARLFASQLLLKKAAIIAEN 159 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDY 259 P ++ GDFN + N N K D + K + LR IDY Sbjct: 160 SPVIVLGDFNTQPNTPTYNYITEKYQDAQLISQKPAKGPTGSFHDFHPLRPENELEKIDY 219 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + F Y + G SDH P++ + D+ Sbjct: 220 IFVSNE---------FQVNTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|315607053|ref|ZP_07882057.1| AP endonuclease domain protein [Prevotella buccae ATCC 33574] gi|315251107|gb|EFU31092.1| AP endonuclease domain protein [Prevotella buccae ATCC 33574] Length = 365 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 38/300 (12%), Positives = 83/300 (27%), Gaps = 68/300 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++S+N+ S + Y ADI+ LQE A+ Sbjct: 100 TLKVLSFNVQNFGYSVDGSPGDGPNP--------IVSYLARSKADIICLQEANGQVIKAE 151 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + +E L + S + + + + + Sbjct: 152 LDSVMGRLYSHHSEELKDSSGDM--------LRLYSRFPIKRVERIHYQSYGNLS----- 198 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSL------------------------ENTYS 178 V ++++NG+ + V++ HL+S + + + Sbjct: 199 ---VAYVLDVNGEDVLVVNNHLESNLLNPTDKAGFKNLVKGELGRHEARQESTHLIDKLA 255 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + Q + ++ + +P ++ GDFN + N + Sbjct: 256 AASRKRAPQVDSVAAYVARHIGR-MPVILCGDFNESPISYAHYRM------ENLLTDCYV 308 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + ID N + DD SDH PI Sbjct: 309 SAGNGPGWSYHRSGMYVRIDNIFCSDN---------WKPYQCRVDDKIKE----SDHYPI 355 >gi|307329665|ref|ZP_07608823.1| exodeoxyribonuclease III Xth [Streptomyces violaceusniger Tu 4113] gi|306884723|gb|EFN15751.1| exodeoxyribonuclease III Xth [Streptomyces violaceusniger Tu 4113] Length = 259 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 81/304 (26%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N T+ L + ++ D++ +QE + Sbjct: 1 MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCVQETKCAESA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y R + + + +A+ K L G D R Sbjct: 42 -------FPYEPLRELGYEAAVNATGRWNGVALVSKAGLTDVTVG-LPGGPDYDGDQEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +++ + + Y + + L+ + Sbjct: 94 A-----IGATCGPVRLWSVYVPNGREIGHPHYDYK------LRWLEALRTAVAGDAAGDR 142 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF + GDFN + + P+ Sbjct: 143 PFAVLGDFNVAPTDEDVWDRSAFDGLTHVTDLEREALAALREAGLSDVVPRPLKYD-RPF 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID V + + +++ D + +GK SDH P+ Sbjct: 202 TYWDYRELGFPKNRGMRID-LVYGNEVFAKAVGDAY------VDREERKGKGASDHAPVV 254 Query: 300 IDYD 303 +D + Sbjct: 255 VDLE 258 >gi|49474726|ref|YP_032768.1| exodeoxyribonuclease III [Bartonella quintana str. Toulouse] gi|49240230|emb|CAF26700.1| Exodeoxyribonuclease III [Bartonella quintana str. Toulouse] Length = 269 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 83/309 (26%), Gaps = 72/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81 R+ +WN+N + QY AD++ LQE +A+ Sbjct: 3 FRIATWNVN----------------SIRLRLAQVFQYLDLFAADVLCLQETKCPDALFPR 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F + S + +A+ + + +D Sbjct: 47 EAFEAAGYKHII-----------LSGQKSYNGVAIVSRLPFKNVEKRFFCQKQDCRY--- 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++VE G+ I + + ++ + D + + + + I +E Sbjct: 93 ----ISVIVEAYGRNIRIHNFYVPAG--GDVPDADVNEKFRHKLDFLEEMAS-IRANQED 145 Query: 202 LVPFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRC 245 + ++ GD N + + ++ K + + Sbjct: 146 DLASLLVGDLNIAPLEDDVWSHQQLLKVVSHTPIETERLQALCCQGGWVDLMRLHFPPPT 205 Query: 246 NANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ N F+ S + SDH Sbjct: 206 KIYTWWSYRARDWALADRGRRLDHIWSSPNLAPFVANLSI-------FRDARGWNQPSDH 258 Query: 296 CPISIDYDF 304 P+ +DF Sbjct: 259 VPVQTVFDF 267 >gi|88854566|ref|ZP_01129233.1| hypothetical protein A20C1_10119 [marine actinobacterium PHSC20C1] gi|88816374|gb|EAR26229.1| hypothetical protein A20C1_10119 [marine actinobacterium PHSC20C1] Length = 302 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 36/290 (12%), Positives = 76/290 (26%), Gaps = 29/290 (10%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A + ++S+NI + L + + L+R+ +V +QE Sbjct: 35 PVEAPDLHVMSYNIR----RRLPKLLPRNPDQWRHRQPLMRRLLAAEQPALVGVQEALFT 90 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A R N + + P + S+ Sbjct: 91 QARFVRQALGEHYRSLGYGRERNTGGEGCPIFYDSRRLQVVDWHQSALSDTPNVPGSTSW 150 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R VE + I ++ S + + A L++ + Sbjct: 151 GNRTPRVVVEAIFRDLATGIHFQAVNTHL----------DHRSRTSRLRSADALRNIVQA 200 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD-SRCNANKNLRN--K 254 + P ++ GDFN + ++ + + + N + Sbjct: 201 ---TPHPTIMTGDFNTDADTHPYDELTGHGLLVDTWNTAEERLTQVWGTFPNYGPPKHDR 257 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ + + + + + G SDH P+ F Sbjct: 258 KRIDWILATP---------GVTAVRAGINVTRYAGGWPSDHAPVQAVVRF 298 >gi|328947089|ref|YP_004364426.1| exodeoxyribonuclease III Xth [Treponema succinifaciens DSM 2489] gi|328447413|gb|AEB13129.1| exodeoxyribonuclease III Xth [Treponema succinifaciens DSM 2489] Length = 251 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 79/305 (25%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L G + + +LDAD LQE A Sbjct: 1 MKFISWNVNGLRAVMGKNFM---------------EAFGSLDADFFCLQETK-LQAGQIQ 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + F++ + + AV K+ + + D+ R Sbjct: 45 MELPDYHQFWNYAEKKGY----------SGTAVFTKHEPISASYGIGIAEHDTEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +K +++ ++ + + + ++ Sbjct: 91 -----VITLEYEKFFLVTVYTPN-------SQDELRRLEYRMKWEDDFRAYLKTLALKKG 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N + + F Sbjct: 139 -VIVCGDMNVAHEEIDIKNPKTNRRNAGFTDEERGKMTELLSSGFTDSFRHFYPDTAGVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ + + + SDHCP+ Sbjct: 198 SWWSYRFHAREKNTGWRIDYFLVSDSIKDKMTGAKIHTEIL-----------GSDHCPVE 246 Query: 300 IDYDF 304 +D +F Sbjct: 247 LDMEF 251 >gi|257069277|ref|YP_003155532.1| exodeoxyribonuclease III Xth [Brachybacterium faecium DSM 4810] gi|256560095|gb|ACU85942.1| exodeoxyribonuclease III Xth [Brachybacterium faecium DSM 4810] Length = 273 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 38/308 (12%), Positives = 72/308 (23%), Gaps = 63/308 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + + N+N L + + + AD++ LQE+ + + Sbjct: 2 TFTIATVNVNGLRA---------------AARKGMGDWLAATSADVITLQEVRAPEELLA 46 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 W I +L + AIAVR V + Sbjct: 47 GLVGEGWSIAGEASQLKGRAG--------VAIAVRSSREDVDLDAMRCGLPGVEGDSHTG 98 Query: 143 RRAV--ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R +G+ + V+ ++ S T + + + Q + Sbjct: 99 RWIESDLADPFGDGRTLTVISCYMHSGNTEKPQTMTDKYAF------LDAMMLRLEQLRA 152 Query: 201 SLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSR 244 + + GD N + + + Sbjct: 153 AGGHVALTGDINIAHTEWDIKNWKGNLKSAGFLPEERAYLDRLTTDAGFVDVHRALHGDG 212 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + IDY + ++ D S R SDH Sbjct: 213 PGPYTWWSQRGKAFDNDAGWRIDYQLATEDLAARATSAQV-------DRAPSYDTRWSDH 265 Query: 296 CPISIDYD 303 P+ I Y Sbjct: 266 APLVISYS 273 >gi|315225375|ref|ZP_07867189.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga ochracea F0287] gi|314944648|gb|EFS96683.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga ochracea F0287] Length = 348 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 41/348 (11%), Positives = 94/348 (27%), Gaps = 56/348 (16%) Query: 2 IRKYVLALVFFLVPCTASVAQKVR------LVSWNINTLSE--QEGVSLWKNSVKRTTSD 53 +++ V +V F++ AQ+ + + +N+ L + + + Sbjct: 1 MKRIVFLMVSFILMTPYINAQEKKKFAVRTVAFYNVENLFDTINDPHKFDDDRTPEGADR 60 Query: 54 Y---------TLLRQYAKN-------LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER 97 + + + DIV L E+ + V + + Sbjct: 61 WTSKVYNDHVHKIAKVISEIGSDVTKHAPDIVGLAEIENEAVVRDLINTEYLKRY---NY 117 Query: 98 LINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKDSFSRAGNRRAVELLVEINGKK 156 I H + + A+ +K + +PL KD R + + E++G+ Sbjct: 118 GIVHYESPDARGVDVALIYKKSVFKPTASFPHPLYLTKDDGKPLYTRDQLLVSGELDGEM 177 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216 I + H S ++ + L++ + + ++ K+ + GDFN Sbjct: 178 IHFIVNHWPSRLGGEAKSRPSREKAAALNK--KIIDSLLS--KDPNAKVIAMGDFNDDPI 233 Query: 217 YLGNNDDFWKT-----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 G + + + D F + K Sbjct: 234 NSGFKNVLKTKDKKEDVKQGELFNPMEAMLKKGMGTLAYQDGWNLFDQFYFTYDLLKEDK 293 Query: 272 QE-------------------SFSEILYNEDDIKSRGKRLSDHCPISI 300 + + + SDH P+ + Sbjct: 294 SSYRYWKTGIFNRSYLANPKGRYKGYPFRSMSNGNYTWGYSDHFPVYM 341 >gi|163761164|ref|ZP_02168241.1| Endonuclease/exonuclease/phosphatase [Hoeflea phototrophica DFL-43] gi|162281715|gb|EDQ32009.1| Endonuclease/exonuclease/phosphatase [Hoeflea phototrophica DFL-43] Length = 346 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 42/336 (12%), Positives = 92/336 (27%), Gaps = 59/336 (17%) Query: 26 LVSWNINTLSEQE-----GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + + N+ + S + + ++AD++ LQE+ S + + Sbjct: 6 VATLNLYHFAAPGIFWHARKPTATYSQAEWDAKKNWIITLLSEMNADVIGLQEVVSQDEL 65 Query: 81 AKVFPKNTWCIFYSTE-RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF-- 137 + N + FY + + + AIA R + S +D+ Sbjct: 66 KALLAANGYPYFYCPVAPAFDADDPEIYVNATVAIASRYPFISAEPLSGVAGVPQDTVID 125 Query: 138 -SRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSC------------- 181 +R V+ ++++ G+ + + F+D Sbjct: 126 EDFRFSRTPVDAVIDLPGIGQTRFFVCHFKSQGAFVDDEIIDGLADWGDKIRTTYMERAM 185 Query: 182 ------SLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINY---------------- 217 + + +A + Q ++ P ++ GD N Sbjct: 186 AGVNQVAKRAAEAGAIYRMFRQSIDADADAPVILLGDLNEDPASHTISILTQADRVWSWG 245 Query: 218 -------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA---Y 267 D+ P + R N + + + +DY V+ Sbjct: 246 SVAANGIPDPFAFLKHVYKLYDAFNLVPMQGFVRPNTHGGVGSGSTLDYVVVSNGLNPKN 305 Query: 268 KFLIQESFSEILYNEDDIKS-RGKRLSDHCPISIDY 302 E +Y++ R SDH P+ Sbjct: 306 PRRRGEVAKVEVYDDHFAAGLPKDRSSDHAPVIATI 341 >gi|282879047|ref|ZP_06287807.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] gi|281298781|gb|EFA91190.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] Length = 362 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 38/307 (12%), Positives = 90/307 (29%), Gaps = 71/307 (23%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + ++++S+N+ + + K DADIV LQE ++ Sbjct: 95 QTPEGAIKVLSYNVWFFGGNGFEHENNP-----------VLNFIKEQDADIVCLQESDAW 143 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + + +K D + + +P++ +D Sbjct: 144 GKYSDKAKALMYSQYPYHASSHAKNKGDIMD---------------IYSRHPIISQEDIN 188 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS------------------- 178 + + + I+G + V++ HL+S + + Sbjct: 189 YPSEGNHSTAFYLNIHGDTVIVINNHLESIGLSPEDKANFKGVVKGNIKGDSAQISTKTL 248 Query: 179 -----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + S+ + QA + +I ++ ++ GDFN N K + Sbjct: 249 IKKLGEASSIRAAQADAIAQYIAAHRDKS--VILCGDFNDGPNSYA-RRTIAKQLRD--- 302 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + + + + ID+ + ++ + + S Sbjct: 303 --CYVETANGPGISYHLGGFYVRIDHMMCSKD-------------WTPYNCKVDNKIKAS 347 Query: 294 DHCPISI 300 DH PI Sbjct: 348 DHYPIYC 354 >gi|257470580|ref|ZP_05634670.1| exodeoxyribonuclease III Xth [Fusobacterium ulcerans ATCC 49185] gi|317064786|ref|ZP_07929271.1| exodeoxyribonuclease III Xth [Fusobacterium ulcerans ATCC 49185] gi|313690462|gb|EFS27297.1| exodeoxyribonuclease III Xth [Fusobacterium ulcerans ATCC 49185] Length = 253 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 72/303 (23%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L Y KN +ADI +QE Sbjct: 1 MKLISWNVNGLRAAVQKGF---------------LDYFKNENADIFCVQETKLQEG-QIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + G R Sbjct: 45 LELEGYHQYWNYAEKKGY----------SGTAIFTKKKPIEVS----YGLGIEEHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + + + L Sbjct: 91 -----VITLEYDDFYMITVYTPNSQEELARLSYRMSWEDEFRNYVMKLDKL--------K 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P +I GD N + + N + F A Sbjct: 138 PVIICGDLNVAHQEIDLKNPKSNRKNAGFSDEERAKFTELLKNGFVDSFRHFYPELTGAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSERLKDIMEGAEIHNETL-----------GSDHCPVV 246 Query: 300 IDY 302 + Sbjct: 247 LKL 249 >gi|229549148|ref|ZP_04437873.1| exodeoxyribonuclease [Enterococcus faecalis ATCC 29200] gi|256957962|ref|ZP_05562133.1| exonuclease III [Enterococcus faecalis DS5] gi|257084299|ref|ZP_05578660.1| exonuclease III [Enterococcus faecalis Fly1] gi|257090921|ref|ZP_05585282.1| exonuclease III [Enterococcus faecalis CH188] gi|307276972|ref|ZP_07558082.1| exodeoxyribonuclease III [Enterococcus faecalis TX2134] gi|312902560|ref|ZP_07761766.1| exodeoxyribonuclease III [Enterococcus faecalis TX0635] gi|312951910|ref|ZP_07770798.1| exodeoxyribonuclease III [Enterococcus faecalis TX0102] gi|229305702|gb|EEN71698.1| exodeoxyribonuclease [Enterococcus faecalis ATCC 29200] gi|256948458|gb|EEU65090.1| exonuclease III [Enterococcus faecalis DS5] gi|256992329|gb|EEU79631.1| exonuclease III [Enterococcus faecalis Fly1] gi|256999733|gb|EEU86253.1| exonuclease III [Enterococcus faecalis CH188] gi|306506395|gb|EFM75555.1| exodeoxyribonuclease III [Enterococcus faecalis TX2134] gi|310630099|gb|EFQ13382.1| exodeoxyribonuclease III [Enterococcus faecalis TX0102] gi|310634230|gb|EFQ17513.1| exodeoxyribonuclease III [Enterococcus faecalis TX0635] gi|315035107|gb|EFT47039.1| exodeoxyribonuclease III [Enterococcus faecalis TX0027] gi|315154300|gb|EFT98316.1| exodeoxyribonuclease III [Enterococcus faecalis TX0031] gi|315159607|gb|EFU03624.1| exodeoxyribonuclease III [Enterococcus faecalis TX0312] gi|315579630|gb|EFU91821.1| exodeoxyribonuclease III [Enterococcus faecalis TX0630] gi|323481658|gb|ADX81097.1| exodeoxyribonuclease III [Enterococcus faecalis 62] Length = 251 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + LDAD LQE A Sbjct: 1 MKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S A++VR R Sbjct: 45 LELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------EAHDQEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ + + + + ++ + + Sbjct: 91 -----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK- 137 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F Sbjct: 138 PVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ ++ + L+ + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246 Query: 300 IDYDF 304 + DF Sbjct: 247 VVLDF 251 >gi|256819956|ref|YP_003141235.1| Endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea DSM 7271] gi|256581539|gb|ACU92674.1| Endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea DSM 7271] Length = 348 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 41/348 (11%), Positives = 94/348 (27%), Gaps = 56/348 (16%) Query: 2 IRKYVLALVFFLVPCTASVAQKVR------LVSWNINTLSE--QEGVSLWKNSVKRTTSD 53 +++ V +V F++ AQ+ + + +N+ L + + + Sbjct: 1 MKRIVFLMVSFILMTPYINAQEKKKFAVRTVAFYNVENLFDTINDPHKFDDDRTPEGADR 60 Query: 54 Y---------TLLRQYAKN-------LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER 97 + + + DIV L E+ + V + + Sbjct: 61 WTSKVYNDHVHKIAKVISEIGSDVTKHAPDIVGLAEIENEAVVRDLINTEYLKRY---NY 117 Query: 98 LINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKDSFSRAGNRRAVELLVEINGKK 156 I H + + A+ +K + +PL KD R + + E++G+ Sbjct: 118 GIVHYESPDARGVDVALIYKKSVFKPTASFPHPLYLTKDDGKPLYTRDQLLVSGELDGEM 177 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216 I + H S ++ + L++ + + ++ K+ + GDFN Sbjct: 178 IHFIVNHWPSRFGGEAKSRPSREKAAALNK--KIIDSLLS--KDPNAKVIAMGDFNDDPI 233 Query: 217 YLGNNDDFWKT-----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 G + + + D F + K Sbjct: 234 NSGFKNVLKTKDKKEDVKQGELFNPMEAMLKKGMGTLAYQDGWNLFDQFYFTYDLLKEDK 293 Query: 272 QE-------------------SFSEILYNEDDIKSRGKRLSDHCPISI 300 + + + SDH P+ + Sbjct: 294 SSYRYWKTGIFNRSYLANPKGRYKGYPFRSMSNGNYTWGYSDHFPVYM 341 >gi|330969502|gb|EGH69568.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 380 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 44/342 (12%), Positives = 92/342 (26%), Gaps = 75/342 (21%) Query: 11 FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53 C +V Q +++++WNI L+ + + + + Sbjct: 52 LLTASCNPAVEAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYN 111 Query: 54 YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99 + + ++ DIV LQ + V ++P +T ++ E + Sbjct: 112 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYEDQLALIKERVTDLYPCSTQAFYWKAEFVP 171 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKI 157 N S R + P+ A + + A+ + +G K+ Sbjct: 172 NPHIWGSVGRKLVT-LSRFHIDSAERLQLPVPDANIISRQFQPKDALLVSYLPLRDGGKL 230 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 V++ L T + +Q + + + + P++I GDFN Sbjct: 231 AVINTSLT----------TARHAGDTAQKQVAATETQLDKLESGGTPWLIGGDFNLLPLG 280 Query: 218 LGNNDDFWKTIDPNDSLIR-------------FPKEKDSRCNANKNLRNKIPI------- 257 + + R + N I Sbjct: 281 QYQRLPEQQRLGYAADSELHQLWDKYPMIPNNAESSGIDRSKWLTHFPNDSRINGPDRTV 340 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 DY + + S + +SDH P+ Sbjct: 341 DYLFYSPSLKR----VSARVRRDDTLL-------ISDHLPVI 371 >gi|217965584|ref|YP_002351262.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes HCC23] gi|217334854|gb|ACK40648.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes HCC23] gi|307569865|emb|CAR83044.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes L99] Length = 256 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 74/285 (25%), Gaps = 35/285 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + ++NI K TL + D + ++E + Sbjct: 2 FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEEPLLPQMLDMK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + W F + ++ + P + + S + R Sbjct: 55 AMLD-WDYFGVGRDDGLEKGEFTAVFYNSTRFTLLQEGHFWLSDTPDVPSIHSTAM-FPR 112 Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V + +GK+ ++ + HL A L Sbjct: 113 ICVWGKFADSDGKQFYLFNTHLDHIS-------------EEARLFASQLLLKKAAIIAEN 159 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS---RCNANKNLRNKIPIDY 259 P ++ GDFN + N N K D + K + + IDY Sbjct: 160 SPVIVLGDFNTQPNTPTYNYITEKYQDAQLISQKPAKGPTGCFHDFHPLRPENELEKIDY 219 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + F Y + G SDH P++ + D+ Sbjct: 220 IFVSNE---------FQVNTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|91763300|ref|ZP_01265264.1| exodeoxyribonuclease III [Candidatus Pelagibacter ubique HTCC1002] gi|91717713|gb|EAS84364.1| exodeoxyribonuclease III [Candidatus Pelagibacter ubique HTCC1002] Length = 258 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 35/300 (11%), Positives = 91/300 (30%), Gaps = 68/300 (22%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + SWN+N + +++Y + ++V +QE+ + + Sbjct: 3 ITSWNVN----------------SVRARIENIKEYLQKFSPNVVMMQEIKTQDE------ 40 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 Y +++ + +A+ K+ ++ L+ K SR Sbjct: 41 ----TFPYDDFSALDYESHVFGQKSYNGVAIISKH-KLENVRIDLIKDKLKQSR-----I 90 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + ++ K + +++I+ + +D+ + TY L + + Sbjct: 91 ISAELKHKKKNVQLINIYTPNGNPVDTDKYTYKKD------WLDKLIKQLKTLSKKNENI 144 Query: 206 VIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 ++AGDFN + ++ + + + Sbjct: 145 ILAGDFNILPSAEDAYNIKGFEDDALYRLEIRKKFREMINLGFHDAYRHIHGEKEGYTYW 204 Query: 251 LRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+F++ + + + + ++ SDH PI I+ Sbjct: 205 DYMRGAWQKNNGLRIDHFLVSNSLLNIVKNVNI-------NKDPRGKEKPSDHTPIEIEL 257 >gi|221107207|ref|XP_002170688.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 495 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 93/309 (30%), Gaps = 27/309 (8%) Query: 22 QKVRLVSWNINTLSEQEGV-------SLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 K+R++++NI + + + LL + +ADI+ LQE Sbjct: 187 DKLRIITYNILADVFCDSEYASEVLYPYCPKYALKLSYRMNLLIKELIGFNADILCLQEC 246 Query: 75 GS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + V + + + + K ++++ L Sbjct: 247 ELKMFQVYLKPVLQIYNYEGYLNLKTGKMPEGEAIFIR-KNKFIYLKDFSISVKEALHLE 305 Query: 132 GAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSF---CFLDSLENTYSPSCSLLSQQ 187 KD + N +LL + + +I +L + + C ++ + + Q Sbjct: 306 CNKDILAAIQNNDIFDLLCKKSSIAQIHILAENKTNGRHLCIFNTHLYFKPGAQLIRVLQ 365 Query: 188 AQWLKDWITQKKESLVP---FVIAGDFNRKINYL-----GNNDDFWKTIDPNDSLIR--- 236 L +++ + + ++ GD+N K K + D +++ Sbjct: 366 IAVLLNYVEKVLKEHQTKCSLIMCGDYNSKKGDPLLQFLNEKSYSLKLLYNLDYVLQCPF 425 Query: 237 -FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + +DY +D++ SDH Sbjct: 426 QLENVTGFPLFTVFVPQFRETLDYIFVDESFTLEGFVPIPLAEELEVFCALPSVVSPSDH 485 Query: 296 CPISIDYDF 304 P+ +D ++ Sbjct: 486 IPLIVDLNW 494 >gi|320104208|ref|YP_004179799.1| endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC 43644] gi|319751490|gb|ADV63250.1| Endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC 43644] Length = 271 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 38/284 (13%), Positives = 75/284 (26%), Gaps = 28/284 (9%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+ +G + W N ++Q + D D+V LQE + Sbjct: 9 LKVLTFNLRYADAADGPNAWPN-------RREAVKQVLIDHDPDLVLLQEALAVQVETVC 61 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA--KDSFSRAG 141 S I + P S+ Sbjct: 62 EALPGHLAVGSGRNDGRDDGEFVPILIRARRFRLETARTFWLSDTPDQPGSISRSWGNHL 121 Query: 142 NRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R VE+ + + G++ V ++HL ++ L L Sbjct: 122 PRIGVEVRLVDRLGGRRWVVGNLHL--------DHDSAEARRRGLDLAVDRLTAAAVASG 173 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 + V ++ GDFN + + + ID+ Sbjct: 174 DPRVLLLMGGDFNAPTEDNTLRRHLGEGFIDLVTAADPSLAAVGTRHDFLGQGGP-RIDH 232 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + F+ I D + SDH P+ + Sbjct: 233 LWLRGG--------EFTPIAAGIDTRPMLERMPSDHHPVWAVVE 268 >gi|209966133|ref|YP_002299048.1| endonuclease [Rhodospirillum centenum SW] gi|209959599|gb|ACJ00236.1| endonuclease [Rhodospirillum centenum SW] Length = 287 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 35/285 (12%), Positives = 81/285 (28%), Gaps = 53/285 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 ++ + +WNI++ + + LDAD+V LQE+G Sbjct: 30 SVPPGYGRLCVATWNIHSCVGMDARFAP-----------ERTACVIRGLDADVVGLQEVG 78 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 ++ + + + R + + + H A+ + + L Sbjct: 79 WHHRGEMGVDQFAFLEAATGYRALAGPTKHNRAA-HYGNALLTRRPVLEVAPLDL----- 132 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + R + +++++G ++ V+ HL + + Q + ++ Sbjct: 133 AMPMREPRGGLCAVLDLDGVEVQVIVAHLGLDPW-------------ERNAQVTRILSFL 179 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 P V GD N + P+ + + Sbjct: 180 D--ARPPRPTVFMGDLNEW----RPKAPRLARLSERLPDCAAPR-------SFHARLPTL 226 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +D + + E + +R SDH P+ Sbjct: 227 RLDRIFVSPTL----------HLASFEVVRSAMTRRASDHLPVRA 261 >gi|296535508|ref|ZP_06897694.1| exodeoxyribonuclease III [Roseomonas cervicalis ATCC 49957] gi|296264163|gb|EFH10602.1| exodeoxyribonuclease III [Roseomonas cervicalis ATCC 49957] Length = 255 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 79/303 (26%), Gaps = 71/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL S+N+N LR++ +N D++FLQE Sbjct: 1 MRLASFNVN----------------SVRKRVPHLRRFLENAQPDLLFLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 T + ++ +AV + + G D+ +R Sbjct: 35 LKCKTEEFPAGEFTDLGYTSHAVGQQGGRNGVAVLGRVPYEVVAEELPGGDGDTHAR--- 91 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + V G I+L + + Y + L+ + ++ Sbjct: 92 ----YVEVTAEGASF--AGIYLPNGNSGGAEGYAYK------LGWMRRLRALAQARLDAF 139 Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P+ I GDFN ++ + Sbjct: 140 TPYAILGDFNVCPTELDLAPGALPPTDALVRPETRAEFRALANLGLTDALRALHPGERLY 199 Query: 248 NKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ID+ ++ + L + D ++ SDH P+ + Sbjct: 200 TYWDYGPAFEGNRGLRIDHAMLSPELAERLARAWV-------DTAPRSQEQPSDHTPLLV 252 Query: 301 DYD 303 + + Sbjct: 253 ELE 255 >gi|291618627|ref|YP_003521369.1| Hypothetical Protein PANA_3074 [Pantoea ananatis LMG 20103] gi|291153657|gb|ADD78241.1| Hypothetical Protein PANA_3074 [Pantoea ananatis LMG 20103] Length = 371 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 74/259 (28%), Gaps = 23/259 (8%) Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 Q +L ADI+ + E S A+ + + + + I + Sbjct: 120 AQVMIDLKADILTVVEAESRPALLEFNNAMLPARQGTPFDHVMVIDGNDERGIDVGLMTG 179 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 +S+ K + +G+ + VL H KS Sbjct: 180 AGFAIDTIRSHVDDKDKQGDLIFSRDCPEFAIPLPDGQTLHVLVNHFKSK-----GYGAK 234 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFV-IAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + S + QA+ +K Q+ + + I GDFN + + + D Sbjct: 235 TFSDARRKLQAERVKAIYQQRIKEGQTLIAITGDFNDTPDS----EALAPLLKETDLKDI 290 Query: 237 FPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFS----------EILYNED 283 F EK IDY ++ +K + + Sbjct: 291 FTHEKFDNGGYPGTWGGCSASNKIDYILLSPALWKKVEKGGVWRKGMWPGVRPVKWETYP 350 Query: 284 DIKSRGKRLSDHCPISIDY 302 ++K SDH + +D Sbjct: 351 ELKKEVNAASDHAAVWVDL 369 >gi|17232798|ref|NP_489346.1| exodeoxyribonuclease III [Nostoc sp. PCC 7120] gi|17134445|dbj|BAB77005.1| exodeoxyribonuclease III [Nostoc sp. PCC 7120] Length = 260 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 32/305 (10%), Positives = 83/305 (27%), Gaps = 71/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N + + + K D++ LQE + Sbjct: 1 MKIATWNVN----------------SIRTRLEQVLDWLKQNPVDVLCLQETKVIDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS--YPLLGAKDSFSRAG 141 S + + S + +A+ + + P+L + Sbjct: 41 ------DFPRSPFENLGYHSYISGQKAYNGVALISQQPLTDVTTGFTPILPDIEPIWDEQ 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R ++ + ++++++ + + S + Y + L++++ Sbjct: 95 KRVITGVI-----DGVRIVNLYVPNGSAIASEKYEYK------LRWLTVLREYLRSLLLL 143 Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246 I GDFN + + + + F K + Sbjct: 144 QPAICICGDFNIALEDKDIHEKVKAENHIMASLAERQALRDVLELGFADAFRKFTTEGGH 203 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ + Y + D + + SDH P Sbjct: 204 -FSWWDYRAASFRRNQGWRIDHHYLTPVLYAQAKSCTI-------DVSPRKLTQPSDHTP 255 Query: 298 ISIDY 302 + ++ Sbjct: 256 VIVEI 260 >gi|158317046|ref|YP_001509554.1| exodeoxyribonuclease III Xth [Frankia sp. EAN1pec] gi|158112451|gb|ABW14648.1| exodeoxyribonuclease III Xth [Frankia sp. EAN1pec] Length = 297 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 74/303 (24%), Gaps = 67/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WNIN + L ++ D+V LQE K+ Sbjct: 1 MRIATWNIN----------------SAKARQPRLIEWLDRASPDVVCLQE-------TKL 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +F + + +A+ + + L F R Sbjct: 38 SDEAFLELFDEDLFRRGYRVAHHGDGRWNGVAILSRAGLEDVRRG--LPGDPGFPGPEPR 95 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + I + +++ + ++ Y + L+D + + Sbjct: 96 A-----ISASCGGIRIWSLYVPNGRTVEDPHYAYKLA------WLAALRDVVAELAPQG- 143 Query: 204 PFVIAGDFNRKINYLGN---------------NDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GDFN + L + Sbjct: 144 PVMTLGDFNIAPTDADVWDIAEFEGATHVTEAERAALGRLHDAGLLDLMRERWPDETVYT 203 Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID + D +G SDH P+ + Sbjct: 204 YWDYRQLCFPKNYGMRID-------LTLATADVAARARAVWVDRAARKGTGTSDHAPVVV 256 Query: 301 DYD 303 D D Sbjct: 257 DLD 259 >gi|320538511|ref|ZP_08038372.1| endonuclease/exonuclease/phosphatase family protein [Treponema phagedenis F0421] gi|320144618|gb|EFW36373.1| endonuclease/exonuclease/phosphatase family protein [Treponema phagedenis F0421] Length = 353 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 100/341 (29%), Gaps = 62/341 (18%) Query: 5 YVLALVFFLVPCTA-------SVAQKVRLVSWNINTLSEQEGVSLWKN---------SVK 48 ++ + + C+ + + LVS+N T + N S + Sbjct: 25 FLFFIPISCIGCSTVFGFSSWESPKTLSLVSYNTQTFFDAIEDGQEFNGFKGSKSRWSPE 84 Query: 49 RTTSDYTLLRQYAK----------NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 R LR+ N DI+ LQE+ + + + Y+ + Sbjct: 85 RYKVRLNRLREALMIATEALTGDINSLPDILILQEIEGERVINDFCRQLSRKESYNYAVI 144 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK--- 155 K + A+ K + + L K+S R E+ + I + Sbjct: 145 TPIEKNAAFT-----TALLSKLPILDVFIHRLHTEKES-----VRPLCEVWINIGSEEYP 194 Query: 156 -KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFN 212 + V H KS ++ + Q + + I + K+ + +VI GDFN Sbjct: 195 EPLVVFSTHWKSKLGKNT--------AEIRRMQEKQVFQKIQELKKTNPDIHYVICGDFN 246 Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF--- 269 + + + + + + L + N ID+ +N Sbjct: 247 QPLEEFDLLTELPNSWNRCEYLRALSVNAQPG-GSFCYKGNWQAIDHIFYSENLSDNKGL 305 Query: 270 --------LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 I + GK SDH PI + Sbjct: 306 DIEHFAVIAIPPLITSAGKPNAYSVFSGKGYSDHLPIGVRL 346 >gi|313625229|gb|EFR95070.1| endonuclease/exonuclease/phosphatase family protein [Listeria innocua FSL J1-023] Length = 256 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 74/285 (25%), Gaps = 35/285 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + ++NI K TL + D + ++E + + Sbjct: 2 FSVTTFNIRFDDTS-------ERKKGWELRKTLTKSLLDKYQWDFMGVEEPLLPQ-MRDM 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 W F + ++A + P + + S + R Sbjct: 54 KEMLDWDYFGVGRDDGIEKGEFTAVFYNSARFNLLQEGHFWLSETPDVPSIHSTAM-FPR 112 Query: 144 RAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V + + GK+ ++ + HL A L Sbjct: 113 ICVWGKLADSVGKQFYIFNTHLDHIS-------------EEARLFASQLLLKKAAIIAGD 159 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDY 259 P +I GDFN N N K D K + + LR IDY Sbjct: 160 SPVIILGDFNTAPNTTTYNYITKKYRDAQLISQTPIKGPIGSFHDFQPLRPENELEKIDY 219 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + Y + G SDH P++ ++ Sbjct: 220 IFVSKEL---------RVCSYKTITDQVDGCSASDHFPVTATLEW 255 >gi|296139981|ref|YP_003647224.1| exodeoxyribonuclease III Xth [Tsukamurella paurometabola DSM 20162] gi|296028115|gb|ADG78885.1| exodeoxyribonuclease III Xth [Tsukamurella paurometabola DSM 20162] Length = 291 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 37/318 (11%), Positives = 73/318 (22%), Gaps = 71/318 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + ++N+N + + ADIV LQE+ Sbjct: 1 MTVATFNVNGIRAARRRGFD---------------SWLAGRGADIVALQELRCPPDAVGD 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F +++ + +A+ + +S+ + R Sbjct: 46 FAG-----YHAAIDCGSIPG-------RNGVAILTREPAAAVRSWAEHPPRARGLREYAH 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFL------------DSLENTYSPSCSLLSQQAQWL 191 + ++ + V ++L Y L+ A+ L Sbjct: 94 EGRYIEADLAEAPLTVACLYLPKGGLPAHLQRPGTLRDVPDGGAKYQRKMRFLAAFAREL 153 Query: 192 KDWITQKKESLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLI 235 F++ GD N + P + Sbjct: 154 DRNRRAAHARGREFLLLGDLNLAHLPHDVTNWRPAQKMEGFLPEERAWLDARLGPRTLVD 213 Query: 236 RFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + R ID+ + + D Sbjct: 214 VVRRLHGDRPGPLSWWSWAGASFTKNVGWRIDHHLASPGLAATAVSV-------VVDKEA 266 Query: 287 SRGKRLSDHCPISIDYDF 304 RLSDH P+ +DY F Sbjct: 267 RADARLSDHAPVVVDYAF 284 >gi|282877908|ref|ZP_06286717.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] gi|281299909|gb|EFA92269.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] Length = 228 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 38/280 (13%), Positives = 70/280 (25%), Gaps = 60/280 (21%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 +++N+ + L + K D V LQE+ + + Sbjct: 1 MTYNLRFG---------------ELASLEELAYHIKAFKPDFVALQEVDCNTHRERAPKQ 45 Query: 87 NTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 N Y T + K + + I + + + + L ++ Sbjct: 46 NGKNFISELAYHTGMFGLYGKTIDYSGGYYGIGMLARYPCIDMKKVMLPNPS----KSEQ 101 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + E+ + HL +QA+++ + + Sbjct: 102 RAVMYATYEVGTDTLVFAVTHLDISGKD------------ARKEQAEFIVQELQKC---N 146 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 P +I GDFN K + + KI IDY Sbjct: 147 YPVLIGGDFNAGPTEPAIEKVMDKWGRNMTIMD----------QTYSSTTPKIKIDYIYA 196 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + LSDH PI + Sbjct: 197 YPKNRWEVKTSQTVR------------SYLSDHFPIVSEI 224 >gi|254389480|ref|ZP_05004707.1| exonuclease [Streptomyces clavuligerus ATCC 27064] gi|326444199|ref|ZP_08218933.1| exodeoxyribonuclease III [Streptomyces clavuligerus ATCC 27064] gi|197703194|gb|EDY49006.1| exonuclease [Streptomyces clavuligerus ATCC 27064] Length = 259 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 74/304 (24%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N T+ L + ++ D++ +QE Sbjct: 1 MRIATWNVN----------------SVTARLPRLLAWLESSGTDVLCIQETKCAEE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R I + + +A+ + L G R Sbjct: 41 ------QFPAEELREIGYESAIHADGRWNGVALVSRVGLDEVVKG-LPGGPAYDGAQEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +++ + + Y + LK+ + Sbjct: 94 A-----ISATCGPVRLWSVYVPNGREVTHDHYAYK------LEWLAALKEAVAADAAGPR 142 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF + GD+N + P+ + Sbjct: 143 PFAVLGDYNIAPADEDVWDRAAFEGSTHVTEPERAALAALRETGLSDVVPRPLKYD-HPF 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID + + D + +GK SDH P+ Sbjct: 202 TYWDYRQLCFPKNRGMRIDLVYGNGPFAGAVKDSYV-------DREERKGKGASDHAPVV 254 Query: 300 IDYD 303 +D D Sbjct: 255 VDLD 258 >gi|315299279|gb|EFU58531.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 16-3] Length = 253 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 82/288 (28%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ NI+ LR + + ADIV LQE+ + V Sbjct: 9 SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHL 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P + F + + + + + H AV + S Sbjct: 59 LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A R + + GK I V+ +HL + Q L +W Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + P ++AGDFN + +D F + Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + LSDH P+S + Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251 >gi|298493134|ref|YP_003723311.1| exodeoxyribonuclease III ['Nostoc azollae' 0708] gi|298235052|gb|ADI66188.1| exodeoxyribonuclease III ['Nostoc azollae' 0708] Length = 260 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 84/303 (27%), Gaps = 67/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N + + + D++ LQE KV Sbjct: 1 MKIATWNVN----------------SIRTRLEQVINWLSESPVDVLCLQE-------TKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 K+ I + + + A+ R+ V +L + R Sbjct: 38 VDKDFPLISFENVGYHPYIYGQKAYNG-VALISRQPLENVSMGFCAILPELEPQWDEQKR 96 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + + S + Y L+ ++ S Sbjct: 97 VITGVI-----DGVRIVNTYVPNGSAVGSEKYEYK------LGWLTVLRKYLQVLLLSDP 145 Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 + GDFN + + +D + I F K + N Sbjct: 146 AISMCGDFNIALEDIDIHDKVKIEDHIMASERERQALRDILSLGFADAFRKFNNEGGN-Y 204 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ + D + ++ SDH P+ Sbjct: 205 SWWDYRTAAFRRNLGWRIDHHYVTPVLCARAQSCII-------DVAPRKLEQPSDHTPVV 257 Query: 300 IDY 302 +++ Sbjct: 258 VEF 260 >gi|149202233|ref|ZP_01879206.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius sp. TM1035] gi|149144331|gb|EDM32362.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius sp. TM1035] Length = 341 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 41/340 (12%), Positives = 93/340 (27%), Gaps = 60/340 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSD--------YTLLRQYAKNLDADIVFLQEMG 75 +R+ ++N+ + + + ++ L LDAD V + E Sbjct: 1 MRIATYNVEWFNALFDDQGQPHDDGKWSARYNVTRRDQLAALGIVFTALDADAVLVVEAP 60 Query: 76 SYNAVAKVFPKNT-WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-------- 126 N + ++ A+ + Sbjct: 61 DDNGRRSTVKALESFAKLMQLRARRALIGFANDTQQELALLYDPDVLTARHDPQGATTAG 120 Query: 127 -----------SYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLE 174 L + ++ +E+ + I+G+ ++ HLKS ++ Sbjct: 121 GDMPPRFDGVFRIDLDIDDRADRVEFSKPPLEVELTTISGRVTRLIGAHLKSKAPHGAVG 180 Query: 175 NTYSP-----SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-------- 221 + + QA WL+ I + ++ GD N Sbjct: 181 RDEAIRIGITNRRKQLAQAVWLRQRIEAHLATDDSLIVLGDLNDGPGLDEYEHLFGRSSV 240 Query: 222 --------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-----IDYFVMDQNAYK 268 D DP+ + +A LR++ +DY ++ + Sbjct: 241 EIIMGEGQDAAAALYDPHARGALLQRFGVVHTSARFYLRDQRRYMQALLDYILISPDLMA 300 Query: 269 FLIQESFSE-----ILYNEDDIKSRGKRLSDHCPISIDYD 303 + ++ +++ SDH P+S+D + Sbjct: 301 RRPVWRIWHPFDDPVCWDNKELRDALLMASDHFPVSLDLE 340 >gi|282865502|ref|ZP_06274553.1| exodeoxyribonuclease III Xth [Streptomyces sp. ACTE] gi|282559546|gb|EFB65097.1| exodeoxyribonuclease III Xth [Streptomyces sp. ACTE] Length = 271 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 35/307 (11%), Positives = 79/307 (25%), Gaps = 65/307 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 + + S N+N L ++ +AD+V LQE+ Sbjct: 2 LTVTSVNVNGLRAAAKKGF---------------VEWLAQSEADVVCLQEVRAEPQQLPE 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +V W ++ + + G S Sbjct: 47 EVREPEGWHTVHAPAAAKGRAGVSLYTRQAP-----------ERVQIGFGGFDVPGSEEF 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + V++ G + V ++L S ++ + + LK + + Sbjct: 96 DTGGRYVEVDLPG--VTVASLYLPSGDVGTERQDEKERFMAAFLPYLEGLK---VRAAAA 150 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ GD+N + + + + Sbjct: 151 GREVLVCGDWNIAHREADLKNWKANKKNSGFLPEERAWLTRVFEEAAYVDVVRALHPDQE 210 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + IDY V + ++ + + G+R SDH Sbjct: 211 GPYSWWSYRGRAFDNDAGWRIDYQVATEGLAARAVKAWV-------ERAATHGERWSDHA 263 Query: 297 PISIDYD 303 P+++ Y+ Sbjct: 264 PVTVTYE 270 >gi|289705979|ref|ZP_06502353.1| putative exodeoxyribonuclease III [Micrococcus luteus SK58] gi|289557316|gb|EFD50633.1| putative exodeoxyribonuclease III [Micrococcus luteus SK58] Length = 308 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 39/315 (12%), Positives = 80/315 (25%), Gaps = 59/315 (18%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 VR+ + N+N + +R++ D++ LQE+ Sbjct: 28 AGAPKADGAVRVATVNVNGIRAS---------------HRKGMREWFAGRGVDVLTLQEV 72 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 A A V + I ++ + + +A+ + ++ + Sbjct: 73 ---RAPADVTAQLVREIVGEDWDEVHLADAVAAAKGRAGVAIASRFPLGEVRTG--IADA 127 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D + R L +G + V+ ++ S + + Sbjct: 128 DGYFDDAGRWIEADLRLPDGSPLTVVSAYVHSGEVDTPKQVDKYR-------FLDEMVRR 180 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 +++ ++ GD N L + F + Sbjct: 181 LSELAAGEGHALVTGDLNVGHTELDIKNWKGNVKKAGFLPEERAYFDRFFGELGFTDVHR 240 Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + IDY + + D S G Sbjct: 241 ALAGPVPGPYTWWSMRGKAFDNDAGWRIDYHMATAGLAERAT-------TAVVDRAPSWG 293 Query: 290 KRLSDHCPISIDYDF 304 R SDH P+ +DY F Sbjct: 294 TRFSDHAPLVVDYQF 308 >gi|295691527|ref|YP_003595220.1| endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] gi|295433430|gb|ADG12602.1| Endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] Length = 319 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 37/321 (11%), Positives = 81/321 (25%), Gaps = 37/321 (11%) Query: 8 ALVFFLVPCTASVAQKV-----RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 A + + + A+ + ++++N+ L K +R Sbjct: 4 AFLLASLTLAPARAETLPPVTFSVMTYNVEGLPWPVRTGRGKALKAIGRE-LAAMRA--A 60 Query: 63 NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS-------------------K 103 D+V +QE + ++ + Sbjct: 61 GRQPDVVLIQEGFRSEIWD-LIDESGYDYVARGPNKGQRDPNMLKGQKTDFRRVKYRRKG 119 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 + + V + +S+ N+ A+ + +E+ G V Sbjct: 120 EGLGKWGSSGLWVLSDHPINWVKSHAYHYCA-GLDCLANKGAMLVSLEVAGLPTPVEIAD 178 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 S + QA LK ++ + + P ++ GDFN + N Sbjct: 179 THLNSKGASGVPRRR-ATQAHRLQADELKRFMQEDRTPGAPLIVGGDFNVMHSPERFNHV 237 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 S + + + +D Q+ FL E + + Sbjct: 238 MADYPFEVVSRWCHHRPGACDTQISYDGDAPW-LD----TQDLIGFLDGEQVTVTPVAVE 292 Query: 284 DIKSRGKRL--SDHCPISIDY 302 SDH + + Sbjct: 293 ATFDGASEPVLSDHDGYKVTF 313 >gi|16331188|ref|NP_441916.1| exodeoxyribonuclease III [Synechocystis sp. PCC 6803] gi|1653682|dbj|BAA18594.1| exodeoxyribonuclease III [Synechocystis sp. PCC 6803] Length = 275 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 41/320 (12%), Positives = 92/320 (28%), Gaps = 74/320 (23%) Query: 9 LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 L F P + + SWN+N S + + D+ Sbjct: 4 LFFLGFP--------MDIASWNVN----------------SVRSRQQHILDWLGTNPVDV 39 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + LQE KV ++ + S + +A+ + + Sbjct: 40 LCLQE-------TKVVDEDFPR---QPFEEAGYHCHISGQKSYNGVAIFSREPLQDVK-- 87 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 A + G+ + ++ + ++++++ + LDS + Y + Sbjct: 88 IGFAALVEPALTGDLDEQKRVISGVYDGVRIVNLYVPNGSALDSEKYLYK------LRWL 141 Query: 189 QWLKDWITQKKESLVP-FVIAGDFNRKINYLGNNDDFWKT---------------IDPND 232 L+ ++ Q + S P F++ GDFN +D + + Sbjct: 142 NLLQTYLEQLRRSDTPEFLVCGDFNIAPEDRDIHDPVGRENHIMATAMEREALTEVLAIA 201 Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283 +L ++ + ID+ + Y + D Sbjct: 202 NLQDAFRKFTEETGHYSWWDYRTRGFSRNRGWRIDHHYLTPQLYDQAQKCWI-------D 254 Query: 284 DIKSRGKRLSDHCPISIDYD 303 ++ SDH P+ + + Sbjct: 255 REPRGWEKPSDHAPVVVTIN 274 >gi|333031155|ref|ZP_08459216.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM 18011] gi|332741752|gb|EGJ72234.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM 18011] Length = 276 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 46/286 (16%), Positives = 80/286 (27%), Gaps = 53/286 (18%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + +R+V++N+ V + N + + K LDAD++ QE+ Sbjct: 41 PKESGDIRIVTYNVRHFENSSQVIEYNN-----------VAKLIKKLDADVICFQEIDKN 89 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +K + + S + K + L G Sbjct: 90 TTRSKKKDQMNEIAKLTHMYDYF-SMSIPYQGGEYGNGILSKEKALSFHKIALPG----- 143 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R A+ + + K V+ HL S ++LS +A Sbjct: 144 --KELRSALVVEFD----KYIVISTHLSL------ESYNREESINILSNEAA-------- 183 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 K +AGD N K K + + S N K I Sbjct: 184 -KYKGKSIYLAGDLNEKKLDTPFFLKLKK----------YWNIESSNKNTYPTPTAKERI 232 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 DY + + L + + +SDH P+ D+ Sbjct: 233 DYIISYKGESSNLTGTDVVRKMKEVNVSS-----ISDHYPVFCDFS 273 >gi|90421064|ref|ZP_01228967.1| exodeoxyribonuclease III [Aurantimonas manganoxydans SI85-9A1] gi|90334699|gb|EAS48476.1| exodeoxyribonuclease III [Aurantimonas manganoxydans SI85-9A1] Length = 268 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 72/309 (23%), Gaps = 72/309 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80 + +WNIN L+++ + DI+ LQE + Sbjct: 2 PFTIATWNIN----------------SVRLRMPLVQRLLEERKPDILCLQETKCPNDQFP 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K F + + +A K D+ Sbjct: 46 EKAFKALGYEHIA-----------IHGQKGYHGVATVSKQPFDDIVRQDFCQIGDARH-- 92 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + + I G+++ V + ++ + D + + ++ I+ + E Sbjct: 93 -----LSTRLSIGGRRLRVHNFYVPAG--GDEPNPEVNVKFKHKLDFIEEMR-LISAEAE 144 Query: 201 SLVPFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSR 244 V ++ GD N + Sbjct: 145 PGVSSLLVGDLNIAPFETDVWSHKQLLKVVSHTPIECEGLLRAQADGRWTDLMRHHVPMD 204 Query: 245 CNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + +D+ Q+ L + +R SD Sbjct: 205 EQLFTWWSYRSKDWAASNRGRRLDHIWGSQDLAPALTA-------IDVMSAARSWERPSD 257 Query: 295 HCPISIDYD 303 H P+ +D Sbjct: 258 HVPVLASFD 266 >gi|225631175|ref|ZP_03787879.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591132|gb|EEH12310.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 259 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 85/305 (27%), Gaps = 72/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N L + + DI+ LQE+ Sbjct: 2 LKIATWNVN----------------SIRKRVNQLCSFIVDSQIDIILLQEIKCMEE---- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y+ + + + V K + + ++ Sbjct: 42 ------QFPYAEIEKLGYECAVYGQVARNGVCVLSKYPILEKFKIDIVEGYQEARY---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E +++ N +K+ V +++ + DS + + L + ++ ++ Sbjct: 92 --IECIIKHNNQKVRVGSVYVPNGQSPDS------QAFEYKLKFFDNLYERMSTLLKNEE 143 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP----------------NDSLIRFPKEKDSRCNA 247 +IAGD+N + + D ++ N + Sbjct: 144 LTIIAGDYNVAPDEIDVFD--SNLLNGQVCFHIREREKLRAILNLGFKDAFRISHPNLQQ 201 Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY ++ A L DD + + SDH P+ Sbjct: 202 FTWWHYQGNSLRNNQGMRIDYMLLSPQAVDKLETCYI-------DDRLRKLENPSDHTPV 254 Query: 299 SIDYD 303 + Sbjct: 255 VCAIE 259 >gi|156934720|ref|YP_001438636.1| hypothetical protein ESA_02555 [Cronobacter sakazakii ATCC BAA-894] gi|156532974|gb|ABU77800.1| hypothetical protein ESA_02555 [Cronobacter sakazakii ATCC BAA-894] Length = 253 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 41/282 (14%), Positives = 80/282 (28%), Gaps = 46/282 (16%) Query: 28 SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV---- 83 S+N+ T++ +G + + LR + + ADIV LQE+ + V + Sbjct: 9 SFNVLTINTHKGFTAFNRRF-----ILPELRDAVRTVSADIVCLQEVMGAHEVHPLHVEN 63 Query: 84 FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +P T F + +++ + H AV + S Sbjct: 64 WPDTTHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVSVPGTE 118 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + G + I + + Q L + + Sbjct: 119 KRGVLHCRITPPGFPKAIHVICVHLGL-----------KEAHRQAQLTMLAELVNS-LPE 166 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI-RFPKEKDSRCNANKNLRNKIPIDYF 260 P V+AGDFN + + L F + + +D Sbjct: 167 GEPVVVAGDFNDW------RQQANRILRNEAGLDEVFTRAHGRPARTFPVSFPLLRLDRI 220 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + LSDH P++++ Sbjct: 221 YVKNASAS-----------APTALPLRNWRHLSDHAPLAVEI 251 >gi|163800520|ref|ZP_02194421.1| hypothetical protein 1103602000595_AND4_07554 [Vibrio sp. AND4] gi|159175963|gb|EDP60757.1| hypothetical protein AND4_07554 [Vibrio sp. AND4] Length = 321 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 50/314 (15%), Positives = 99/314 (31%), Gaps = 30/314 (9%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 S ++ + N+ G S T + + L DI+ LQE+ Sbjct: 6 STENRITFATANLLNFVAPPGAYYDFENIYSFDDWQDKLTWTKSQFEQLSPDIIGLQEVF 65 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY---PLLG 132 S F + + +++++ + + A+A R V ++ L Sbjct: 66 SIQETKDFFAEIGY-LYFASVDTPHIEGDYIYSRPVVALASRFPIEHVEAVTFEQNTLDV 124 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSL-------ENTYSPSCSLL 184 + +R+ + + V +HLKS DS S Sbjct: 125 FGSMSAPPFSRKPLRAHIIHPIIGHIAVYVMHLKSQRPADSDKPEDASKPIARWLSTQQR 184 Query: 185 SQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE--- 240 +A L+D + Q + +P ++ GD N+ I N+ + + + ++ Sbjct: 185 GWEAAMLRDAMQKQYALNPMPTLLMGDMNQTITPTSVNNVLVEPYGDSVTDLQLTDGWKL 244 Query: 241 -----KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI------KSRG 289 DSR + +DY ++ Q Y D +R Sbjct: 245 QVAPSLDSRPATHYYFAKGNVLDYILLSQEFDAHADVSIAEVTDYQVLDTHLINPSFARD 304 Query: 290 KRLSDHCPISIDYD 303 K SDH +++ + Sbjct: 305 KNASDHAFVALTVE 318 >gi|16759734|ref|NP_455351.1| hypothetical protein STY0848 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142493|ref|NP_805835.1| hypothetical protein t2075 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213161219|ref|ZP_03346929.1| hypothetical protein Salmoneentericaenterica_14750 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213586700|ref|ZP_03368526.1| hypothetical protein SentesTyph_37640 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213647750|ref|ZP_03377803.1| hypothetical protein SentesTy_10972 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855118|ref|ZP_03383358.1| hypothetical protein SentesT_13982 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289825286|ref|ZP_06544565.1| hypothetical protein Salmonellentericaenterica_07871 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25353375|pir||AB0599 conserved hypothetical protein ybhP [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502027|emb|CAD05260.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29138124|gb|AAO69695.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 252 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 77/288 (26%), Gaps = 54/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ N + LR + + ADIV LQE+ + V Sbjct: 9 SFKVLTINTHKGFTAFNKRF----------ILPELRDAVRTVGADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P T F + + + + + H AV + S Sbjct: 59 LHIENWPDTTHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRGVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R + + + I V+ +HL S Q L W Sbjct: 114 VGGSEKRGVLYCRITPPMLNRPIHVMCVHLGLR-------------ESHRQAQLTMLAGW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + P ++AGDFN G ++ F + Sbjct: 161 VNA-LPESEPVLVAGDFNDWRQKAGP------PLNAAGLEEIFTRAHGRPARTFPVSMPL 213 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + LSDH P+S + Sbjct: 214 LRLDRIYVKNANASS-----------PGALPLRNWRHLSDHAPLSAEI 250 >gi|114562597|ref|YP_750110.1| exonuclease III [Shewanella frigidimarina NCIMB 400] gi|114333890|gb|ABI71272.1| Exodeoxyribonuclease III [Shewanella frigidimarina NCIMB 400] Length = 268 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 81/310 (26%), Gaps = 72/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN + L+ + DI+ LQE ++ Sbjct: 1 MKIVSFNING----------------IRARLHQLQALIDSHSPDIIGLQETKVHDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K V +D A R Sbjct: 42 -------FPVADVEAMGYKVHYHGGKAHYGVAMLSKAEPVNVIKGFETDDED----AQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + NG+ + V + F + + Q L + + + Sbjct: 91 LIIGQFKQDNGRILTVFN-----GYFPQGESIHHETKYPAKRKFYQDLMVHLEKHHSADE 145 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 I GD N ++ + + F + Sbjct: 146 DIAIIGDINISPTDLDIGIGEVNAKRWLKTGKCSFQPEEREWLARLQQWGFIDSFRQLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 +R + ID ++ ++ L++ + D + S Sbjct: 206 TRTERYSWFDYRSKGFDDNRGLRIDVILVTESMLPRLVES-------DVDYELRGIDKPS 258 Query: 294 DHCPISIDYD 303 DH PI + Sbjct: 259 DHAPIWSTFS 268 >gi|255025182|ref|ZP_05297168.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes FSL J2-003] Length = 256 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 75/285 (26%), Gaps = 35/285 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + ++NI K TL + D + ++E + Sbjct: 2 FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEEPLLPQMLDMK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + W F + ++ + P + + S + R Sbjct: 55 AMLD-WDYFGVGRDDGLEKGEFTAVFYNSTRFTLLQEGHFWLSDTPDVPSIHSTAM-FPR 112 Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V + +GK+ ++ + HL A L Sbjct: 113 ICVWGKFADSDGKQFYIFNTHLDHIS-------------EEARLFASQLLLKKAAIIAEN 159 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDY 259 P +I GDFN + N N K D + K + LR IDY Sbjct: 160 SPVIILGDFNTQPNTPTYNYITEKYQDAQLISQKPAKGPTGSFHDFHPLRPENELEKIDY 219 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + F Y + G SDH P++ + D+ Sbjct: 220 IFVSNE---------FQVSTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|223945403|gb|ACN26785.1| unknown [Zea mays] Length = 339 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 75/301 (24%), Gaps = 38/301 (12%) Query: 40 VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV-AKVFPKNTWCIFYSTERL 98 ++ + S + K+ DAD + +QE+ Y+ K + + Y Sbjct: 34 FPHSPSACLKWKSRSGAILTELKSFDADFMCIQELDEYDTFYKKNMENSGYSSIYIQRSG 93 Query: 99 INHSKRDSNNDIHTAIAVRKKNV-------------------------RVLQQSYPLLGA 133 +A V+K+ + + + P Sbjct: 94 DKRDGCGIFYKPKSAELVQKEVILYNDLVEKYVPSDNVNSALENNSSAEEDKNAKPDNSK 153 Query: 134 KDSFSRAGNR-----RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + + R + +++ +L + + + L + Sbjct: 154 RGDPNDPRVRLKRDCVGLLAAFKLSDPCDQILIVANTHIYWDPQWIDVKLAQAKYLLSRV 213 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI-----RFPKEKDS 243 + I+ K +IAGDFN N + D + Sbjct: 214 SQFEQLISNKYNCKPSVIIAGDFNSTPGDKVYNYLLSANLGSTDEAPIKLRSLYAANGGE 273 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQ--ESFSEILYNEDDIKSRGKRLSDHCPISID 301 N +DY + + + + SDH PI D Sbjct: 274 PEYTNYTPGFTGTLDYIFLSDGSSIKPTSLLRLPRGDSEDVKGGLPNFRHPSDHLPIGAD 333 Query: 302 Y 302 + Sbjct: 334 F 334 >gi|197265396|ref|ZP_03165470.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197243651|gb|EDY26271.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 252 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 77/288 (26%), Gaps = 54/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ N + LR + + ADIV LQE+ + V Sbjct: 9 SFKVLTINTHKGFTAFNKRF----------ILPELRDAVRTVGADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P T F + + + + + H AV + S Sbjct: 59 LHIENWPDTTHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R + + + I V+ +HL S Q L W Sbjct: 114 VGGSEKRGVLYCRITPPMLNRPIHVMCVHLGLR-------------ESHRQAQLTMLAGW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + P ++AGDFN G ++ F + Sbjct: 161 VNA-LPESEPVLVAGDFNDWRQKAGP------PLNAAGLEEIFTRAHGRPARTFPVSMPL 213 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + LSDH P+S + Sbjct: 214 LRLDRIYVKNANASS-----------PTALPLRNWRHLSDHAPLSAEI 250 >gi|158338364|ref|YP_001519541.1| exodeoxyribonuclease III [Acaryochloris marina MBIC11017] gi|158308605|gb|ABW30222.1| exodeoxyribonuclease III [Acaryochloris marina MBIC11017] Length = 268 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 97/306 (31%), Gaps = 68/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ SWN+N + + + D++ LQE + + Sbjct: 1 MKIASWNVN----------------SIRTRLEHVLDWLYTQSIDVLCLQETKVIDEDFPK 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 F + + ++ S ++ N A+ R V PLLG + Sbjct: 45 ASFEEEGYQVYVSGQKAYN----------GVALISRTTLSEVSSGFTPLLGPDLTQHYDQ 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R + ++ + +L++++ + +DS + Y + + L ++ + Sbjct: 95 QKRLITGIISPG---VRILNLYVPNGSEIDSDKYVYK------LEWLELLHHYVEKLLSQ 145 Query: 202 L-VPFVIAGDFNRKINYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCN 246 +I GDFN ++ +D + L ++ +S+ Sbjct: 146 DPQHLLICGDFNIALDDRDMHDPSKREAHIMSTDRERQALQKVLALGLEDVFRKFNSKSE 205 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ + Y+ + D R + SDH P Sbjct: 206 QFSWWNYRAGSFQRNKGWRIDHHYLTPTLYEQATACTI-------DAAPRRLPKPSDHAP 258 Query: 298 ISIDYD 303 + ++ D Sbjct: 259 VVVEID 264 >gi|99035972|ref|ZP_01315016.1| hypothetical protein Wendoof_01000152 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 259 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 84/305 (27%), Gaps = 72/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N L + N DIV LQE+ Sbjct: 2 LKIATWNVN----------------SIRKRVNQLCSFIVNSQIDIVLLQEIKCTEE---- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y+ + + + V K + + ++ + Sbjct: 42 ------QFPYAEIEKLGYEYAIYGQVARNGVCVLSKYPILEKFKIDIVESHQEARY---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E +++ KI V +++ + DS + + L + ++ ++ Sbjct: 92 --IECVIKYTNSKIRVGSVYVPNGQSPDSH------AFEYKLKFFDNLYERMSTLLKNEE 143 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP----------------NDSLIRFPKEKDSRCNA 247 +IAGD+N + + D ++ N + Sbjct: 144 LTIIAGDYNIAPDEIDVFD--SNLLNGQVCFHIREREKLRAILNLGFKDAFRISHPNLQQ 201 Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY ++ A L DD + + SDH P+ Sbjct: 202 FTWWHYQGNSLRNNQGMRIDYMLLSPQAVDKLETCYI-------DDRLRKLENPSDHTPV 254 Query: 299 SIDYD 303 + Sbjct: 255 VCAIE 259 >gi|49475800|ref|YP_033841.1| exodeoxyribonuclease III [Bartonella henselae str. Houston-1] gi|49238607|emb|CAF27848.1| Exodeoxyribonuclease III [Bartonella henselae str. Houston-1] Length = 260 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 90/303 (29%), Gaps = 66/303 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V+WNI + + L Q+ + DIV LQE+ S + Sbjct: 1 MKIVTWNIAG----------------IKARHETLYQWLQQNRPDIVCLQEIKSTDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ K KD +R Sbjct: 41 ------NFPRDAIESLGYHIETHGQKSFNGVAILSKKTPDEVIRQLPGNDKDEQTRY--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + N I V ++L + ++S + Y + + L + Sbjct: 92 --IEAVYSTNKGVIRVASLYLPNGNPINSEKYPYK------MEWMERLYTHAKSLLKYEE 143 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGD+N +L ++ I D+ + Sbjct: 144 PLVLAGDYNVIPTPLDAKTPKEWSDDALFLPQTRQAFQRIIHLGFYDAIRNVTDTPSFSF 203 Query: 249 KNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + N I ID+ ++ A L I ++ SDH P+ ID Sbjct: 204 WDFQAAAWRKNNGIRIDHLLLSPEAVDQL-------ICAYSQKEVRGYQKPSDHTPVWID 256 Query: 302 YDF 304 +F Sbjct: 257 LNF 259 >gi|333023524|ref|ZP_08451588.1| putative exodeoxyribonuclease III [Streptomyces sp. Tu6071] gi|332743376|gb|EGJ73817.1| putative exodeoxyribonuclease III [Streptomyces sp. Tu6071] Length = 259 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 72/304 (23%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N T+ L + ++ D++ +QE + Sbjct: 1 MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCVQETKTTAE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + +AV + S L R Sbjct: 41 ------GFPTEALREAGYESAVNATGRWNGVAVISRAGLDDVVSG-LPDQPAYDGVMEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + + Y + + L+ + Sbjct: 94 A-----LGATCGPVRVWSVYVPNGREVGHPHYAYK------LEWLEALRTAVAGDAAGTR 142 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF + GD+N + P+ Sbjct: 143 PFAVMGDYNVAPGDEDVYDPAVFEGLTHVTPPERAALAELRATGLGDLVPRPLKYD-RPY 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID + D + +GK SDH P+ Sbjct: 202 TYWDYRQLAFPKNRGMRIDLVYANAAFRSAAKDAYV-------DREERKGKGASDHAPVV 254 Query: 300 IDYD 303 +D D Sbjct: 255 VDLD 258 >gi|320654071|gb|EFX22139.1| hypothetical protein ECO7815_07649 [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 253 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 81/288 (28%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ NI+ LR + + ADIV LQE+ + V Sbjct: 9 SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P + F + + + + H AV + S Sbjct: 59 LHVENWPDTSHYEFLADTMWSDFAYGHNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A R + + GK I V+ +HL + Q L +W Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + P ++AGDFN + +D F + Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + LSDH P+S + Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251 >gi|257420126|ref|ZP_05597120.1| exonuclease III [Enterococcus faecalis T11] gi|257161954|gb|EEU91914.1| exonuclease III [Enterococcus faecalis T11] Length = 251 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + LDAD LQE A Sbjct: 1 MKCISWNVNGLRAVVKKNFM---------------DVFSELDADFFCLQETK-LQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S A++VR R Sbjct: 45 LELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGV-------------EAHDQEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ + + + + ++ + + Sbjct: 91 -----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK- 137 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F Sbjct: 138 PVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ ++ + L+ + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246 Query: 300 IDYDF 304 + DF Sbjct: 247 VVLDF 251 >gi|110633851|ref|YP_674059.1| endonuclease/exonuclease/phosphatase [Mesorhizobium sp. BNC1] gi|110284835|gb|ABG62894.1| Endonuclease/exonuclease/phosphatase [Chelativorans sp. BNC1] Length = 370 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 45/367 (12%), Positives = 99/367 (26%), Gaps = 86/367 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVK----------------RTTSDYTLLRQ------- 59 VR+ ++N+ L + S ++N + R + Sbjct: 2 SVRIATFNVENLMNRFDFSGFRNQLHQDRTLAMFEIKDEEEYRELERARTIAHTDDTRQL 61 Query: 60 ---YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 ADI+ LQE+ + A+ + + R S + I AI + Sbjct: 62 TALAIAATRADILCLQEVDNQAALNAFEYGYLHKMIGAGYREKYSSAGNDARGIDVAIMM 121 Query: 117 R------KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKK 156 R + ++ + D R R +E+ V + GK Sbjct: 122 RRQTADGEPIEFRRMTTHAHITFDDFNLYTPELAELGLGPNERIFRRDCLEVDVLVGGKP 181 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL----VPFVIAGDFN 212 + + +H K+ + + + S + +A ++ I + ++I GD N Sbjct: 182 LTIYIVHFKAMNSVRNGRDGRLGSMPIRIAEASAVRRIILDRFGPEGTARKRWMICGDLN 241 Query: 213 RKINYLGNNDDFW---------------KTIDPNDS-LIRFPKEKDSRCNA-NKNLRNKI 255 + + + + + + Sbjct: 242 DYRERVLIEGEAHTGYDFRPVREAQSSVNVLTDGGFCENVVERRPELDRWTLYHTRGPEE 301 Query: 256 P----IDYFVMDQNAYK---------------FLIQESFSEILYNEDDIKSRGKRLSDHC 296 +DY ++ + + + + + SDHC Sbjct: 302 RHLCQLDYILLSPALAQKNGKVMPDIVRNGQPWRTIFPPGQEVERYPRTGWDRPKASDHC 361 Query: 297 PISIDYD 303 P++I D Sbjct: 362 PVAISLD 368 >gi|310790575|gb|EFQ26108.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola M1.001] Length = 300 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 41/286 (14%), Positives = 77/286 (26%), Gaps = 19/286 (6%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-K 82 +R+V+ N+ +E K R L ++ + LQE+ + Sbjct: 18 LRIVTQNVRYATEHP-TPKEKPWSFRGPRLCNQLDFITSGHESAFICLQEVLYSQIEDVQ 76 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + W S +++ + P + A N Sbjct: 77 SYLGSAWGYIGLGRDDGKRGGEFSPVFYQVDRWKCERSETLWLSKTPE-KPSRGWDAALN 135 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R V+ + F S LL + A+ + Sbjct: 136 RVVTVGEFLDKATDTRVVVMSTH---FDHQGVVAREESAKLLLRIAREWGKGANG--KPP 190 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-----KIPI 257 ++AGDFN D + P+EK N + I Sbjct: 191 TAVLLAGDFNSTPEDNAYKTMVAPESGMVDVSTQVPEEKRYGNKLTYTSFNEPDEEPLRI 250 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D+ + + + +++D LSDH P+ D + Sbjct: 251 DFLFVKDPSPVTIKTFGVLSNKFDDDV------YLSDHRPVVADIE 290 >gi|303237381|ref|ZP_07323951.1| exodeoxyribonuclease III [Prevotella disiens FB035-09AN] gi|302482768|gb|EFL45793.1| exodeoxyribonuclease III [Prevotella disiens FB035-09AN] Length = 250 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 77/305 (25%), Gaps = 79/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L ++ + +DAD LQE A Sbjct: 1 MKFISWNVNGLRACVTKGFKES---------------FEAIDADFFCLQETK-MQAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ + + A+ K+ + + D R Sbjct: 45 IAFDGYESYWNYAEKKGY----------SGTAIFTKHQPLNVTYGLGIEEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ + + + L + Sbjct: 91 -----VITLEMENFYLVTCYTPNSQDGLKRLEYRMRWEDDFQTYIKRL--------DEKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + F + Sbjct: 138 PVIVCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKMTQFLGKGFIDSFRTLYPEQV-TY 196 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ L+ +Y SDHCP+ Sbjct: 197 SWWSYRFKAREKNAGWRIDYFLLSDRLRAQLVDAKIHTEVY-----------GSDHCPVE 245 Query: 300 IDYDF 304 ++ +F Sbjct: 246 VELNF 250 >gi|302528187|ref|ZP_07280529.1| hypothetical protein SSMG_04569 [Streptomyces sp. AA4] gi|302437082|gb|EFL08898.1| hypothetical protein SSMG_04569 [Streptomyces sp. AA4] Length = 296 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 98/304 (32%), Gaps = 43/304 (14%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL+++N+ L ++ R + + +D D+V L E S ++ ++ Sbjct: 2 LRLLTFNVLQLPLI-------SASPRGWLRAGWAAEAVRAVDPDVVVLNEAFSLSSAGRL 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNND-----------IHTAIAVRKKNVRVLQQSYPLLG 132 + ++++ ++ R + + + V + + Sbjct: 55 ASRLKRHGYHASPQIGALRGRREWDGAVPPVSPLRTLVGGGVRVLSRYPIRWCGQHLYSA 114 Query: 133 AKDSFSRA-GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 A + ++ ++W+ HL++ L T ++ +Q + L Sbjct: 115 VHRKTQDALCAKGVALAELDTPDGRVWLAATHLQADEPPTPLSATR----AVRLEQLKEL 170 Query: 192 KDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDPNDSLIRF 237 ++++++ P ++ GD N + ++ + ++P+ + Sbjct: 171 REFVSRTAPPDAPVLLVGDLNVEYYAADARGVPGERGQDHADAAEAVGGRLEPDSDMHEH 230 Query: 238 PKEKDSRC-NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + S A + +DY + + ++ + SDH Sbjct: 231 TFDSASNRLVARSQPGYRNVLDYV---GSINENGLRPVPHITTRTVPFRPR--QPASDHF 285 Query: 297 PISI 300 P+ Sbjct: 286 PVLA 289 >gi|237801483|ref|ZP_04589944.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024342|gb|EGI04399.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 379 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 92/325 (28%), Gaps = 69/325 (21%) Query: 21 AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 Q +++++WNI L+ + + + + + + ++ DIV Sbjct: 69 GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYNLDEVARVIRDEQPDIVL 128 Query: 71 LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 LQ + + ++P +T ++ E + N S A Sbjct: 129 LQGVDDGAKNSDYQDQLKLLEERLTDLYPCSTQAFYWKAEFVPNPHIWGS-VGRKLATLS 187 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174 R + P+ A + + A+ + +G ++ V++ L + Sbjct: 188 RFHIDSAERLQLPVPDANIISRQFQPKDALLVSYLPLRDGGELAVVNTSLSTAKRDG--- 244 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI---------------NYLG 219 +Q + + + + P++I GDFN Sbjct: 245 --------TAQKQIAATETLLDKLESGGTPWLIGGDFNLLPLGQYQRLPEPQRQSYAADS 296 Query: 220 NNDDFWK---TIDPNDSLIRFPKEKDSRCNANKNL--RNKIPIDYFVMDQNAYKFLIQES 274 W+ I N + K N + +DY + + S Sbjct: 297 ELHALWEKYPMIPSNAESSGIDRSKWLTRFPNDSRINGPDRTVDYLFYSPSLKR----VS 352 Query: 275 FSEILYNEDDIKSRGKRLSDHCPIS 299 + +SDH P+ Sbjct: 353 ARVRRDDTLL-------ISDHLPVI 370 >gi|242309877|ref|ZP_04809032.1| exodeoxyribonuclease LexA [Helicobacter pullorum MIT 98-5489] gi|239523878|gb|EEQ63744.1| exodeoxyribonuclease LexA [Helicobacter pullorum MIT 98-5489] Length = 256 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 77/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + +DAD+ +QE Sbjct: 5 MKLISWNVNGLRACMNKGFM---------------DFFNTIDADVFCIQE-SKMQKEQAT 48 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + ++++ + + +A+ K + + D R Sbjct: 49 FDFPNYEEYWNSAEKKGY----------SGVAIFSKKKPLSVAYDMGISHHDKEGRI--- 95 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++++++ + + L+ Sbjct: 96 ------ITAEYNDFFLVNVYTPNSKRELERLEYRMEWEDDFRNFLKNLEV--------TK 141 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + F + A Sbjct: 142 PVIVCGDLNVAHKEIDLKNPKTNRRNAGFTDEEREKMSVLLDSGFTDTFRYFHPTLEGAY 201 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ + L S ++ SDHCP+ Sbjct: 202 SWWSYMGKARENNTGWRIDYFLCSKALDSKLKSASIYPEIF-----------GSDHCPVG 250 Query: 300 IDYD 303 ++ + Sbjct: 251 LEIN 254 >gi|170740918|ref|YP_001769573.1| exodeoxyribonuclease III Xth [Methylobacterium sp. 4-46] gi|168195192|gb|ACA17139.1| exodeoxyribonuclease III Xth [Methylobacterium sp. 4-46] Length = 270 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 36/297 (12%), Positives = 84/297 (28%), Gaps = 53/297 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N L + + D+V LQE+ + Sbjct: 1 MRITTWNVN----------------SIRQRLGHLLAFLEEAKPDVVCLQELKCVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ + L++ L ++A Sbjct: 41 ------SFPRTEIEEAGYVVATHGQKAFNGVALLARQPLPLRELRRGLPGDPEDAQARY- 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC-SLLSQQAQWLKDW-------- 194 +E L+ + V I+L + + + + + L+ A+ L++ Sbjct: 94 --IEALIPTPAANLRVASIYLPNGNPVGTPKFDDKLAFLRRLTAHARQLREREEVLVLAG 151 Query: 195 ----ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 I + + P GD + + + + Sbjct: 152 DYNVIPEPVDVADPAAWLGDALFRPESRAAFRALLNEGFADALRACDERPGLYTFWDYQA 211 Query: 251 LRNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID+ ++ A L+ S + ++ SDH P++++ D Sbjct: 212 GAWPRNLGIRIDHLLLSPQALDRLVSASVQKH-------LRGLEKPSDHVPVTVELD 261 >gi|16764176|ref|NP_459791.1| cytoplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56414087|ref|YP_151162.1| hypothetical protein SPA1940 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62179380|ref|YP_215797.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161614949|ref|YP_001588914.1| hypothetical protein SPAB_02703 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550511|ref|ZP_02344268.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992044|ref|ZP_02573142.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230699|ref|ZP_02655757.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168236740|ref|ZP_02661798.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168240676|ref|ZP_02665608.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263689|ref|ZP_02685662.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168466402|ref|ZP_02700264.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820041|ref|ZP_02832041.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443379|ref|YP_002040048.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450151|ref|YP_002044841.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194471467|ref|ZP_03077451.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194734200|ref|YP_002113904.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251468|ref|YP_002145768.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197363010|ref|YP_002142647.1| hypothetical protein SSPA1809 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243219|ref|YP_002214776.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200390368|ref|ZP_03216979.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204929865|ref|ZP_03220886.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205352071|ref|YP_002225872.1| hypothetical protein SG0792 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856250|ref|YP_002242901.1| hypothetical protein SEN0759 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238913372|ref|ZP_04657209.1| hypothetical protein SentesTe_19906 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|16419319|gb|AAL19750.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56128344|gb|AAV77850.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62127013|gb|AAX64716.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161364313|gb|ABX68081.1| hypothetical protein SPAB_02703 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402042|gb|ACF62264.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408455|gb|ACF68674.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194457831|gb|EDX46670.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194709702|gb|ACF88923.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195630975|gb|EDX49561.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094487|emb|CAR60004.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197215171|gb|ACH52568.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197290109|gb|EDY29466.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197937735|gb|ACH75068.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602813|gb|EDZ01359.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320859|gb|EDZ06060.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205271852|emb|CAR36687.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205324628|gb|EDZ12467.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329612|gb|EDZ16376.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334664|gb|EDZ21428.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339836|gb|EDZ26600.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343080|gb|EDZ29844.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347702|gb|EDZ34333.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708053|emb|CAR32344.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261246071|emb|CBG23873.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992555|gb|ACY87440.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157398|emb|CBW16887.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911837|dbj|BAJ35811.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085086|emb|CBY94873.1| Uncharacterized protein ybhP [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226386|gb|EFX51437.1| Endonuclease/Exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616289|gb|EFY13198.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619539|gb|EFY16414.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622765|gb|EFY19610.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628677|gb|EFY25464.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631615|gb|EFY28371.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637141|gb|EFY33844.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641659|gb|EFY38295.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644546|gb|EFY41086.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648478|gb|EFY44930.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654215|gb|EFY50538.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658130|gb|EFY54397.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663604|gb|EFY59806.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670340|gb|EFY66480.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671576|gb|EFY67698.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676932|gb|EFY72999.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682857|gb|EFY78876.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686536|gb|EFY82518.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322713851|gb|EFZ05422.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323129120|gb|ADX16550.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323194567|gb|EFZ79760.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199102|gb|EFZ84198.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202057|gb|EFZ87116.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208917|gb|EFZ93854.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323215246|gb|EFZ99991.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220835|gb|EGA05273.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227306|gb|EGA11474.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229924|gb|EGA14047.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233149|gb|EGA17245.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240884|gb|EGA24926.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243201|gb|EGA27221.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248740|gb|EGA32668.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251744|gb|EGA35611.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258764|gb|EGA42421.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260691|gb|EGA44296.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267872|gb|EGA51351.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268742|gb|EGA52202.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326622531|gb|EGE28876.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627113|gb|EGE33456.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332987744|gb|AEF06727.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 252 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 77/288 (26%), Gaps = 54/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ N + LR + + ADIV LQE+ + V Sbjct: 9 SFKVLTINTHKGFTAFNKRF----------ILPELRDAVRTVGADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P T F + + + + + H AV + S Sbjct: 59 LHIENWPDTTHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R + + + I V+ +HL S Q L W Sbjct: 114 VGGSEKRGVLYCRITPPMLNRPIHVMCVHLGLR-------------ESHRQAQLTMLAGW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + P ++AGDFN G ++ F + Sbjct: 161 VNA-LPESEPVLVAGDFNDWRQKAGP------PLNAAGLEEIFTRAHGRPARTFPVSMPL 213 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + LSDH P+S + Sbjct: 214 LRLDRIYVKNANASS-----------PTALPLRNWRHLSDHAPLSAEI 250 >gi|27375729|ref|NP_767258.1| exodeoxyribonuclease III [Bradyrhizobium japonicum USDA 110] gi|27348867|dbj|BAC45883.1| exodeoxyribonuclease III [Bradyrhizobium japonicum USDA 110] Length = 271 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 28/306 (9%), Positives = 74/306 (24%), Gaps = 64/306 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + L +WNIN L+ ++ K+ D++ LQE + Sbjct: 3 LSLTTWNIN----------------SVRLRIDLVAKFLKSARPDVLCLQE---TKCIDDA 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + RL + + +A+ + + K Sbjct: 44 FPLKRFK------RLGYEHVALNGQKGYHGVAIVSRIPF-ESKDIRTFCDKVDSRHISVS 96 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + K + + + ++ + + L + Sbjct: 97 FGTQANIA---KPLVLHNFYVPAGGDIPDPALNEKFDHKLRF--LDEMTACEPLHPRGDD 151 Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N + + + + + + Sbjct: 152 RHILVGDLNVAPHENDVWSHKQLLKVVSHTPVETEKLKAALAAGEWVDVARERIPMSEKV 211 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + + + +R SDH P Sbjct: 212 YTWWSYRSADWTVGDRGRRLDHIWVSRALKDAVQD-------FKILRDARSWERPSDHVP 264 Query: 298 ISIDYD 303 +++ + Sbjct: 265 VTVTLE 270 >gi|88798725|ref|ZP_01114308.1| exodeoxyribonuclease III [Reinekea sp. MED297] gi|88778488|gb|EAR09680.1| exodeoxyribonuclease III [Reinekea sp. MED297] Length = 274 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 35/312 (11%), Positives = 83/312 (26%), Gaps = 74/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN + L + D DI+ LQE+ ++ + Sbjct: 1 MKIISFNING----------------IRARLHQLEELKATHDPDILSLQEIKVHSDL--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A + + +P D R Sbjct: 42 ------YPHEAVAAASGLVSQVHGQKAHHGVATLSRQPVPAEYGFPTDVEDDQRRLIVTR 95 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +G+++ V++ F N ++ + L W+ + Sbjct: 96 HP-----TADGRELVVIN-----GYFPQGESNKHATKWPAKRKFYADLLTWLETHAKPDD 145 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GDFN +L ++++ + + + Sbjct: 146 LLIVLGDFNIAPVDEDIGIGEKNAKRWLREGKSAFLPEEREWFEKLRAWGLVDSYRHLYP 205 Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + ID+ ++ + + D + Sbjct: 206 DSTELFSWFDYRSKGFDDDPKRGLRIDHLMITEPLVPLIQSAGI-------DYHIRGMDK 258 Query: 292 LSDHCPISIDYD 303 SDH P ++ D Sbjct: 259 PSDHAPAWLELD 270 >gi|326330083|ref|ZP_08196396.1| putative 5'-nucleotidase family protein [Nocardioidaceae bacterium Broad-1] gi|325952128|gb|EGD44155.1| putative 5'-nucleotidase family protein [Nocardioidaceae bacterium Broad-1] Length = 657 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 99/347 (28%), Gaps = 72/347 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKN----------------------SVKRTTSDYT----- 55 V++ S+N+ G + N +R D Sbjct: 313 DVKIASFNVLNYFTTLGDADDDNVGDGGCTAYKDRAGDGNSVSGGCDQRGAWDPADFGRQ 372 Query: 56 --LLRQYAKNLDADIVFLQEMGSYNAV------------AKVFPKNTWCIFYSTERLINH 101 + LDAD+V L E+ + + A + ++ + Sbjct: 373 QSKIVAAINALDADVVGLMEIENSARLGETPDEATNSLVAALNAAAGRKVWTANPSSAEL 432 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG-AKDSFSRAGNRRAVELLVEI--NGKKIW 158 + I AI ++ VR + ++ L + D + R + + + G Sbjct: 433 PDASGADVITNAIIYKRSAVRRIGEARALGDQSGDDQAFGNAREPIGQIFKPADGGAPFL 492 Query: 159 VLDIHLKS-----FCFLDSLENTYSPSCSL-LSQQAQWLKDWITQKKESL--VPFVIAGD 210 + H KS D+ + + +QA L W++ + +AGD Sbjct: 493 FVVNHFKSKGSAGPWPGDADTGDGQGASNESRVRQATALVSWVSSVRSETGVTDVALAGD 552 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + +++L + + +D+ +++++A + Sbjct: 553 FNSYTQEDPMQVLYEAGFADSETLSGNEE------YSYSFSGLSGSLDHVLLNRHAQRRF 606 Query: 271 IQESFSEILYNEDDIKSRG--------------KRLSDHCPISIDYD 303 I E + R SDH P+ + Sbjct: 607 TGSDIWSINSGESLLLEYSRYNYTGIDLHTDSPYRSSDHDPVVVGLT 653 >gi|282866534|ref|ZP_06275577.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE] gi|282558581|gb|EFB64140.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE] Length = 322 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 39/297 (13%), Positives = 83/297 (27%), Gaps = 40/297 (13%) Query: 24 VRLVSWNINT-LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM------GS 76 +R+V+WN+ + G + + + + A DAD++ LQE+ Sbjct: 44 LRVVTWNVCGEAGGKRGEAGYCPYRNSPAEKVEQITELAHERDADVIALQEICGGAAGSH 103 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + R ++ H +A+ + V +S +L + Sbjct: 104 LSLLRTALGPEWSVRRAEGARPDGRTRCRGGLSGHLGVAIAVRGKVVGARSRNVLPPDPA 163 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + + V +G H+ + +Q ++D++ Sbjct: 164 GHSHETLPVLCVRV--SGWSYTPCTTHILPGEEP------------RVLEQITGVRDFVR 209 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI- 255 Q P V+ GDFNR + K + + + Sbjct: 210 Q---EDRPTVLTGDFNRN-----SGAAQLKPLASAFTECPGLLGTGQGTSTYHQWMPAEG 261 Query: 256 -----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-----KRLSDHCPISIDY 302 +D+ + + + D + SDH P+ D Sbjct: 262 THSFHTLDHVFVSKASEVRAPFARCGVDRDRMDTTPNEAGGVEPDGYSDHAPVFADI 318 >gi|227536411|ref|ZP_03966460.1| endonuclease/exonuclease/phosphatase family protein [Sphingobacterium spiritivorum ATCC 33300] gi|227243787|gb|EEI93802.1| endonuclease/exonuclease/phosphatase family protein [Sphingobacterium spiritivorum ATCC 33300] Length = 371 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 91/306 (29%), Gaps = 65/306 (21%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + +R++S+N++ + + + ++ D++ QE S Sbjct: 104 TAADSSIRVLSFNVHLFKTAKKGEEKDFKRE--------VLGIIDSIKPDVICFQEYYSK 155 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 V+ K F + + A+ K + Sbjct: 156 IKGKHVYAKELRENFGYKYWYFEPASVNDY--EAYGQAIFSKYPVI-------HSGTIVK 206 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN-------------------TYS 178 + G R + +E K + + ++HL+SF + ++ Sbjct: 207 NEYGINRIIYADIEKGKKSMRIYNVHLRSFALQNEDKDFIQNPSGESNKTATRRVGRKLK 266 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLI 235 + + S+QA+ LK+ I + +P+++ GDFN N S Sbjct: 267 QAFASRSEQAEALKEHIET---AKIPYMVMGDFNDTPMSYSVNLIGKGMQNAFQKKGSGW 323 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + IDY + +N + + ++LSDH Sbjct: 324 GVTHYEMLPIFQ---------IDYIFTSND--------------FNILNYQIVKRKLSDH 360 Query: 296 CPISID 301 PI D Sbjct: 361 YPIWAD 366 >gi|116254288|ref|YP_770126.1| exodeoxyribonuclease III [Rhizobium leguminosarum bv. viciae 3841] gi|115258936|emb|CAK10045.1| putative exodeoxyribonuclease III [Rhizobium leguminosarum bv. viciae 3841] Length = 267 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 33/307 (10%), Positives = 76/307 (24%), Gaps = 68/307 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +WNIN ++ Q DI+ LQE N + Sbjct: 3 FSITTWNIN----------------SVRLRMPIVEQLVLKHRPDILCLQETKVTNDLFPA 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P + + + +A+ + G D+ Sbjct: 47 APL---------RAMGYNHIIIHGQKGYHGVAIASRIPLAEDHRQDYCGVGDARH----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + E +++ + + ++ + D + T +P + + + E+ Sbjct: 93 --ISAIFEHGNRRVRLHNFYVPAG--GDEPDRTINPKFGHKLDFIEEM-KLLKANGEANT 147 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N + + + + L + Sbjct: 148 SAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETEGLLEVMKRGAWLDLMRQHVPENEKL 207 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + L R SDH P Sbjct: 208 YTWWSYRAKDWEAADRGRRLDHIWSSSDLGPHLK-------RIEILKEARGWDRPSDHVP 260 Query: 298 ISIDYDF 304 ++ +DF Sbjct: 261 VTAHFDF 267 >gi|114707219|ref|ZP_01440117.1| exodeoxyribonuclease III [Fulvimarina pelagi HTCC2506] gi|114537415|gb|EAU40541.1| exodeoxyribonuclease III [Fulvimarina pelagi HTCC2506] Length = 260 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 41/300 (13%), Positives = 78/300 (26%), Gaps = 67/300 (22%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + SWNIN + L + + + DI LQE+ S + Sbjct: 3 IASWNING----------------IKARIDGLTAWLQERNPDIACLQEIKSQDE------ 40 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + +A+ K + D +R Sbjct: 41 ----TFPKKVIEDLGYHVETHGQKGFNGVALLSKEKPESVRRGLPGDESDEQARY----- 91 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 +E L + + + V I+L + L + + Y + L+ Sbjct: 92 IEGLWQTDSGPLRVASIYLPNGNPLGTAKFEYKLA------WMDRLERHAEALLAHEERL 145 Query: 206 VIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANKNL 251 ++AGD+N +D + + + D R Sbjct: 146 ILAGDYNVIPQPKDVHDPAAWLNDALFQPESRGNLRRLVHLGFADALRMTDDRAELYTFW 205 Query: 252 RNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ ++ A L D ++ SDH PI + Sbjct: 206 DYQAGAWQKNNGIRIDHLLLSPEAQIVLRSVGI-------DKQVRSWEKPSDHVPILAEL 258 >gi|109900032|ref|YP_663287.1| endonuclease/exonuclease/phosphatase [Pseudoalteromonas atlantica T6c] gi|109702313|gb|ABG42233.1| Endonuclease/exonuclease/phosphatase [Pseudoalteromonas atlantica T6c] Length = 243 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 38/280 (13%), Positives = 89/280 (31%), Gaps = 42/280 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+V++NI++ + V Y + Q+ + DI +QEM + + Sbjct: 1 MRIVTYNIHSGVGVDKV-----------QSYARIGQFLASQCVDIALIQEMDTRP-PERS 48 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + I + S + AV + + +++ + + R Sbjct: 49 IQDDVEQICAGHFTQLISSPALQESSGWYGNAVLSRYPVLSKRTLDVSQSGF-----QPR 103 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESL 202 E++++ + + V++ H +Q L +++ + S Sbjct: 104 NIQEVVLDTSLGPLRVINTHKGLKK-------------QERRKQFALLAEYLREKMAGSK 150 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 +P V+ GDFN D + ++ N +D Sbjct: 151 IPIVLGGDFNEWQFMTKAFKDINQVLNEN---------PVRATFPVAWPLF--RLDRLWT 199 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +++ + + ++ SDH PI +D Sbjct: 200 SFDLSLMKKRDANISSISASVLKTPQTRQFSDHYPILLDI 239 >gi|281414526|ref|ZP_06246268.1| exodeoxyribonuclease III [Micrococcus luteus NCTC 2665] Length = 308 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 39/315 (12%), Positives = 81/315 (25%), Gaps = 59/315 (18%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 VR+ + N+N + +R++ D++ LQE+ Sbjct: 28 AGAPKADGAVRVATVNVNGIRAS---------------HRKGMREWFAGRGVDVLTLQEV 72 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 A A V + I ++ + + +A+ + ++ + Sbjct: 73 ---RAPADVTAQLVSEIVGEDWDEVHLADAVAAAKGRAGVAIASRFPLGEVRTG--IADA 127 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D + R L +G + V+ ++ S + + Sbjct: 128 DGYFDDAGRWIEADLRLPDGSPLTVVSAYVHSGEVDTPKQVDKYR-------FLDEMVRR 180 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 +++ ++ GD N L + F + Sbjct: 181 LSELAAGEGHALVTGDLNVGHTELDIKNWKGNVKKAGFLPEERAYFDRFFGELGFTDVHR 240 Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + IDY + + + D S G Sbjct: 241 ALAGPVPGPYTWWSMRGKAFDNDAGWRIDYHMATADLAERAT-------TAVVDRAPSWG 293 Query: 290 KRLSDHCPISIDYDF 304 R SDH P+ +DY F Sbjct: 294 TRFSDHAPLVVDYQF 308 >gi|148548255|ref|YP_001268357.1| exodeoxyribonuclease III [Pseudomonas putida F1] gi|148512313|gb|ABQ79173.1| Exodeoxyribonuclease III [Pseudomonas putida F1] Length = 265 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 76/304 (25%), Gaps = 70/304 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + +++ ++NIN S L + + DI LQE Sbjct: 2 KALKIATFNING----------------IRSRLPALLAWLEREQPDIACLQE-------- 37 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +A+ + L+ L G ++ Sbjct: 38 --LKAADQQFPRAELEAAGYGSLHHGQPSWNGVAILVRGSDPLEVRRGLPGLEEDSQSRY 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 A ++ V ++L + + Y + L ES Sbjct: 96 LEAAAHGVL--------VACLYLPNGNPQPGPKFDYK------LHWFECLIQHARSLYES 141 Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246 P ++AGDFN + ++ + L Sbjct: 142 GHPTLLAGDFNVVPTDMDIYNPRSWLKDALLQPESRACYQRLLDQGWLDAIRHLYPDERV 201 Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ +++ +L + D + SDH P+ Sbjct: 202 YTFWDYFRNHWARNAGLRIDHLLLNPELAPYLKRAGV-------DAWVRNEAKASDHAPV 254 Query: 299 SIDY 302 I+ Sbjct: 255 WIEL 258 >gi|302184783|ref|ZP_07261456.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae 642] Length = 380 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 46/325 (14%), Positives = 95/325 (29%), Gaps = 68/325 (20%) Query: 21 AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 Q +++++WNI L+ + + + + + + ++ DIV Sbjct: 69 GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYNLDEVARVIRDEQPDIVL 128 Query: 71 LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 LQ + VA ++P +T ++ E + N S A Sbjct: 129 LQGVDDGAKNSDYEDQLALIKERVADLYPCSTQAFYWKAEFIPNPHIWGS-VGRKLATLS 187 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174 R + P+ A + + A+ + +G K+ V++ L + Sbjct: 188 RFHIDSGERIQLPVPDANLISRQFQPKDALLVSYLPLRDGGKLAVINTSLTTARHTGD-- 245 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI------ 228 +Q + + + + P++I GDFN + + Sbjct: 246 --------TAQRQVAATETQLDKLESGGTPWLIGGDFNLLPLGQYQRLPEQQRLGYAADS 297 Query: 229 ---DPNDSLIRFPKEKDS----RCNANKNLRNKIPI-------DYFVMDQNAYKFLIQES 274 + D P +S R + N I DY + + S Sbjct: 298 ELHELWDKYPMIPDNAESSGIDRSKWLTHFPNDSRISGPDRTVDYLFYSPSLKR----VS 353 Query: 275 FSEILYNEDDIKSRGKRLSDHCPIS 299 + +SDH P+ Sbjct: 354 ARV-------RRDDTLLISDHLPVI 371 >gi|227834100|ref|YP_002835807.1| exodeoxyribonuclease III [Corynebacterium aurimucosum ATCC 700975] gi|262183414|ref|ZP_06042835.1| exodeoxyribonuclease III [Corynebacterium aurimucosum ATCC 700975] gi|227455116|gb|ACP33869.1| exodeoxyribonuclease III [Corynebacterium aurimucosum ATCC 700975] Length = 269 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 32/294 (10%), Positives = 78/294 (26%), Gaps = 47/294 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WNIN + D D++ LQE +A Sbjct: 1 MRIATWNIN----------------SVRTRAQRAVDLLAKHDIDVLCLQETKVADA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ K Q++ A + Sbjct: 41 ------KFPREPFEEVGYHVTCHGLNQWNGVAILSKEEPEEVQTFFPGQPGFHKDPAKEQ 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC-------SLLSQQAQWLKDWIT 196 V + I + +++ + + Y + Q++ L Sbjct: 95 AREARAVSARVRGIEIWSLYVPNGREITDRHFDYKLDFLYSLARYAENRTQSKLLLTGDF 154 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--- 253 F K + ++ ++ + + + + ++ Sbjct: 155 NIAPWDEDVWDMSPFRGKTHVTEPERAAFQMLEEAGLVEVTRRFTEEDRWTYFDYKSLRF 214 Query: 254 ----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ID+ + + + D ++ G + SDH P+ D+D Sbjct: 215 QKNEGMRIDFQLASEPLARL-------VEGAQVDMVERAGDKTSDHVPLIADFD 261 >gi|149180849|ref|ZP_01859351.1| exodeoxyribonuclease [Bacillus sp. SG-1] gi|148851368|gb|EDL65516.1| exodeoxyribonuclease [Bacillus sp. SG-1] Length = 253 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 82/305 (26%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VSWN+N + + K++DADI +QE Sbjct: 1 MKIVSWNVNGIRACVKKGFM---------------DFFKDVDADIFCIQESKLQEG-QIQ 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ AV K + G + R Sbjct: 45 LDLENYHQYWN----------YAERKGYSGTAVFTKQEPLSVS----YGIGEDDDEPEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + ++L+++ + S + + L + Sbjct: 91 C-----ITLEFEDFYLLNVYTPNSKRDLSRLEDRLHWEERVRAYIKELDEI--------K 137 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N N + + T+ + F + + Sbjct: 138 PVIYCGDLNVAHNEIDLRNPKSNHGNSGFTTEEREKMSTLLNEGFVDSFRHLYPEKDQSY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ L + SDHCP+ Sbjct: 198 TWWSYMSKVRERNIGWRIDYFIVSDRLKDSLKDAGMHTDVL-----------GSDHCPVY 246 Query: 300 IDYDF 304 I+ DF Sbjct: 247 IEIDF 251 >gi|108803660|ref|YP_643597.1| endonuclease/exonuclease/phosphatase [Rubrobacter xylanophilus DSM 9941] gi|108764903|gb|ABG03785.1| Endonuclease/exonuclease/phosphatase [Rubrobacter xylanophilus DSM 9941] Length = 265 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 33/291 (11%), Positives = 74/291 (25%), Gaps = 42/291 (14%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++R++++N+ +G + W+ + + D++ QE+ N Sbjct: 2 AARLRVMTFNVRGAYHPDGRNAWRRRRSLN-------ARVVRGAAPDLIGFQELQRANLR 54 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG-----AKD 135 + RL + AI + +L+ L Sbjct: 55 FYERELPRYR------RLPGPEYENRRPRARNAIFWDPDRLELLESGGFWLSETPERFSR 108 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 S+ R A + + +L ++ S + + + Sbjct: 109 SWGSRQVRSANWAVFRVLPSGPDLLHLNTHLDHVSAEARRRGSRLIAGRLEGVRL----- 163 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 P ++ GDFN R ++ + + Sbjct: 164 --------PVLLTGDFNCNPGSRTYEVFASAGFADA--HRRAGNPPENTFHRFMGEGYRS 213 Query: 256 ----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ ++ + + SDH P+ D Sbjct: 214 GKEGRIDWILVRDGGRAR-----WEVLSCRVVRDCEPPLYPSDHYPVVADL 259 >gi|317047407|ref|YP_004115055.1| endonuclease/exonuclease/phosphatase [Pantoea sp. At-9b] gi|316949024|gb|ADU68499.1| Endonuclease/exonuclease/phosphatase [Pantoea sp. At-9b] Length = 253 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 40/293 (13%), Positives = 85/293 (29%), Gaps = 49/293 (16%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N + LR A+ ADIVFLQE+ Sbjct: 2 TQNAQGFSIKVLTINTHKGFTSFNRRF----------ILPELRDAARATSADIVFLQEVM 51 Query: 76 SYNAVAKV----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYP 129 +A+ + +P+ + F + +++ + H A+ + V ++ Sbjct: 52 GTHAIHSLHIENWPETSHYEFIADTMWHDYAYGRNAVYPEGHHGNAILSRFPIVEYENRD 111 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + A NR + + + G+ + I + Q + Sbjct: 112 ISVAGG-----ENRGMLHCKISLPGQPQPLHVICVHLGLR-----------EPHRRAQLR 155 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + + I P V+AGDFN ++ F + Sbjct: 156 MMCEMIAS-LPPDAPLVVAGDFNDWQVRANPYLKRHAGLEE-----VFSLKSGRPARTFP 209 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + A LSDH P++++ Sbjct: 210 ARFPLLRLDRIYVRNAAISQPWALPVK-----------PWSHLSDHAPLAVEI 251 >gi|257079900|ref|ZP_05574261.1| exonuclease III [Enterococcus faecalis JH1] gi|294779916|ref|ZP_06745298.1| exodeoxyribonuclease III [Enterococcus faecalis PC1.1] gi|307269235|ref|ZP_07550589.1| exodeoxyribonuclease III [Enterococcus faecalis TX4248] gi|256987930|gb|EEU75232.1| exonuclease III [Enterococcus faecalis JH1] gi|294453028|gb|EFG21448.1| exodeoxyribonuclease III [Enterococcus faecalis PC1.1] gi|306514454|gb|EFM83015.1| exodeoxyribonuclease III [Enterococcus faecalis TX4248] gi|329578016|gb|EGG59431.1| exodeoxyribonuclease III [Enterococcus faecalis TX1467] Length = 251 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 73/305 (23%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + LDAD LQE A Sbjct: 1 MKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S A++VR Sbjct: 45 LELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGIEAH------------------ 85 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + G+ I + + + ++ + + Sbjct: 86 -------DQEGRMITLEYPEFFMVTCYTPNSQAELKRLAYRMTWEDAFRAYLNELNQEK- 137 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F Sbjct: 138 PVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ ++ + L+ + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246 Query: 300 IDYDF 304 + DF Sbjct: 247 VVLDF 251 >gi|54293461|ref|YP_125876.1| hypothetical protein lpl0510 [Legionella pneumophila str. Lens] gi|53753293|emb|CAH14740.1| hypothetical protein lpl0510 [Legionella pneumophila str. Lens] Length = 257 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 89/294 (30%), Gaps = 50/294 (17%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + V L+++NI+ V +R L+ D VFLQE+ Sbjct: 6 SMQPEMRSVSLITYNIHKGFGVGAVRFL----------LPEMRDAIAGLNPDFVFLQEVQ 55 Query: 76 --SYNAVAKVFPKN----TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 ++ I + ++K H A+ K +S Sbjct: 56 GKHRKREKRIVSWPDSPQCEYIAENIWPHYVYAKNAVYQSGHHGNAILSKYPFESFESIN 115 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 L +R + ++++ I +L +HL F + ++Q + Sbjct: 116 LSN-----MNRASRGILHTQLKLDNNIIHLLCVHLGLFK-------------AERTEQCK 157 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L I P ++AGDFN + + + + ++ + + + Sbjct: 158 ALIQRIKDVVPKNEPLIMAGDFNDWRHV--ISKILAENLGIEEAFVALEGQH---ARSFP 212 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + +D + + + LSDH P+ ++ Sbjct: 213 AIKPALCVDRVYFRGMKVQEVAC-----------LQGKPWRMLSDHLPLYARFE 255 >gi|169631267|ref|YP_001704916.1| exodeoxyribonuclease III protein XthA [Mycobacterium abscessus ATCC 19977] gi|169243234|emb|CAM64262.1| Probable exodeoxyribonuclease III protein XthA [Mycobacterium abscessus] Length = 266 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 31/306 (10%), Positives = 68/306 (22%), Gaps = 66/306 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N + + + + D++ +QE + Sbjct: 1 MRLATWNVN----------------SIRARADRVISWLERSGTDVLAMQETKCSD----- 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +A+ + S S Sbjct: 40 -----KQFPMQAFTDAGYEVAHVGFSQWNGVAIASRVGLEDVTVGFEGQPGWSSSEDIEE 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--S 201 + + + V +++ + L+ Y + L+D Sbjct: 95 ASEARALGATCNGVRVWSLYVPNGRTLEDPHYQYK------LRWLSALRDTAAGWLADAP 148 Query: 202 LVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + GD+N + ++ Sbjct: 149 DQQVALVGDWNIAPTDDDIWSVEAYQGSTHVSEPERSAFTAMNDAGFADVVRPFTPGP-G 207 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 ID+ + K + D + +GK SDH P Sbjct: 208 VYTYWDYTQLSFPKKRGMRIDFVLGSPEFAKR-------VGNAHIDREERKGKGASDHAP 260 Query: 298 ISIDYD 303 + +D D Sbjct: 261 VVVDLD 266 >gi|119897710|ref|YP_932923.1| hypothetical protein azo1419 [Azoarcus sp. BH72] gi|119670123|emb|CAL94036.1| conserved hypothetical protein [Azoarcus sp. BH72] Length = 283 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 74/309 (23%), Gaps = 56/309 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA----DIVFLQEM-GSYN 78 +R+VSWNI +GV L + + L A D++ LQE+ + Sbjct: 1 MRIVSWNIQWGRGADGVV--------------RLARTIEALRALGELDVICLQEVAEHFP 46 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDS-------NNDIHTAIAVRKKNVRVLQQSYPLL 131 + + + + + + L Sbjct: 47 GLPGGEAGDEPRQLAEAFPGYEAVFGAAVDVPGAGGGRARFGNLLLSRLPLGAVFRHLLP 106 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 D + R VE +V+ + V+ HL+ + + L Sbjct: 107 APPDPGRPSMQRVCVEAVVQAPFGDLRVMTTHLEYYSPRQ--RAAQVQALRTLQHDVAAA 164 Query: 192 KDWITQKKESL---------VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------ 236 KE V+ GDFN + + + + Sbjct: 165 ALLPPAGKEGNPAFAARARPAAAVLCGDFNCEPGSVEHAALCADAAVAGAAFRDCWTVLH 224 Query: 237 --FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 P + + D+ + + SD Sbjct: 225 GAAPHPPSVGLHGAEWPDRPYCCDFVFASEGLVPRVRSLQIVTETA-----------ASD 273 Query: 295 HCPISIDYD 303 H P+ ++ Sbjct: 274 HQPVLLELS 282 >gi|22135535|gb|AAM93248.1| deoxyribonuclease I precursor [Bos taurus] Length = 282 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 39/284 (13%), Positives = 90/284 (31%), Gaps = 30/284 (10%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA--K 82 ++ ++NI T E + + + + + DIV +QE+ + VA K Sbjct: 24 KIAAFNIRTFGET---------KMSNATLASYIVRIVRRY--DIVLIQEVRDSHLVAVGK 72 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + +++ ++ R V VL G + + + + Sbjct: 73 LLDYLNQDDPNTYHYVVSEPLGRNSYKERYLFLFRPNKVSVLDTYQYDDGCESCGNDSFS 132 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + K+ I D++ S L Q +W + Sbjct: 133 REPAVVKFSSHSTKVKEFAIVALHSAPSDAVAEINSLYDVYLDVQQKWHLN--------- 183 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 ++ GDFN +Y+ ++ + + + + + N D V+ Sbjct: 184 -DVMLMGDFNADCSYVTSSQWSSIRLRTSSTFQWVIPDSADTTATSTNCAY----DRIVV 238 Query: 263 DQNAYKF-LIQESFSEILYNEDDIKSR--GKRLSDHCPISIDYD 303 + + ++ S + + S +SDH P+ + Sbjct: 239 AGSLLQSSVVPGSAAPFDFQAAYGLSNEMALAISDHYPVEVTLT 282 >gi|328886463|emb|CCA59702.1| Sphingomyelinase C precursor [Streptomyces venezuelae ATCC 10712] Length = 346 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 39/295 (13%), Positives = 90/295 (30%), Gaps = 31/295 (10%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N S+ L+ N + + + + D+V LQE +A + Sbjct: 60 LKVLTYNTFLFSKT----LYPNWGQDHRAKAIPTAPFYQGQ--DVVVLQEAFDNSASDAL 113 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGAKD 135 + Y T + + + + K V ++ Y A Sbjct: 114 KANSAGQYPYQTPVVGRGTGGWDATGGSYSSTTPEDGGVTILSKWPIVRKEQYVYKDACG 173 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + + N+ +++ +NG K+ VL H +S S + + S+Q + + ++ Sbjct: 174 ADWWS-NKGFAYVVLNVNGSKVHVLGTHAQSTDPGCSAG----EAVQMRSRQFKAIDAFL 228 Query: 196 TQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANK 249 + ++AGD N + Sbjct: 229 DAKNIPAGEQVIVAGDMNVDSRTPEYGTMLADAGLAAADARTGHPYSFDTELNSIASERY 288 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPI 298 + +DY + + + + + S + LSDH P+ Sbjct: 289 PDDPREDLDYVLYRAGNARPANWTNNVVLEKSAPWTVSSWGKSYTYTNLSDHYPV 343 >gi|289424786|ref|ZP_06426568.1| exodeoxyribonuclease III [Propionibacterium acnes SK187] gi|289427574|ref|ZP_06429286.1| exodeoxyribonuclease III [Propionibacterium acnes J165] gi|295131421|ref|YP_003582084.1| exodeoxyribonuclease III [Propionibacterium acnes SK137] gi|289154749|gb|EFD03432.1| exodeoxyribonuclease III [Propionibacterium acnes SK187] gi|289159065|gb|EFD07257.1| exodeoxyribonuclease III [Propionibacterium acnes J165] gi|291377273|gb|ADE01128.1| exodeoxyribonuclease III [Propionibacterium acnes SK137] gi|313763084|gb|EFS34448.1| exodeoxyribonuclease III [Propionibacterium acnes HL013PA1] gi|313773022|gb|EFS38988.1| exodeoxyribonuclease III [Propionibacterium acnes HL074PA1] gi|313802417|gb|EFS43642.1| exodeoxyribonuclease III [Propionibacterium acnes HL110PA2] gi|313807850|gb|EFS46334.1| exodeoxyribonuclease III [Propionibacterium acnes HL087PA2] gi|313812037|gb|EFS49751.1| exodeoxyribonuclease III [Propionibacterium acnes HL083PA1] gi|313812136|gb|EFS49850.1| exodeoxyribonuclease III [Propionibacterium acnes HL025PA1] gi|313819198|gb|EFS56912.1| exodeoxyribonuclease III [Propionibacterium acnes HL046PA2] gi|313819763|gb|EFS57477.1| exodeoxyribonuclease III [Propionibacterium acnes HL036PA1] gi|313823880|gb|EFS61594.1| exodeoxyribonuclease III [Propionibacterium acnes HL036PA2] gi|313827241|gb|EFS64955.1| exodeoxyribonuclease III [Propionibacterium acnes HL063PA1] gi|313828429|gb|EFS66143.1| exodeoxyribonuclease III [Propionibacterium acnes HL063PA2] gi|313831114|gb|EFS68828.1| exodeoxyribonuclease III [Propionibacterium acnes HL007PA1] gi|313833483|gb|EFS71197.1| exodeoxyribonuclease III [Propionibacterium acnes HL056PA1] gi|313838117|gb|EFS75831.1| exodeoxyribonuclease III [Propionibacterium acnes HL086PA1] gi|314914557|gb|EFS78388.1| exodeoxyribonuclease III [Propionibacterium acnes HL005PA4] gi|314919199|gb|EFS83030.1| exodeoxyribonuclease III [Propionibacterium acnes HL050PA1] gi|314920633|gb|EFS84464.1| exodeoxyribonuclease III [Propionibacterium acnes HL050PA3] gi|314925728|gb|EFS89559.1| exodeoxyribonuclease III [Propionibacterium acnes HL036PA3] gi|314931457|gb|EFS95288.1| exodeoxyribonuclease III [Propionibacterium acnes HL067PA1] gi|314957017|gb|EFT01123.1| exodeoxyribonuclease III [Propionibacterium acnes HL027PA1] gi|314957831|gb|EFT01934.1| exodeoxyribonuclease III [Propionibacterium acnes HL002PA1] gi|314960672|gb|EFT04773.1| exodeoxyribonuclease III [Propionibacterium acnes HL002PA2] gi|314963372|gb|EFT07472.1| exodeoxyribonuclease III [Propionibacterium acnes HL082PA1] gi|314969733|gb|EFT13831.1| exodeoxyribonuclease III [Propionibacterium acnes HL037PA1] gi|314974296|gb|EFT18392.1| exodeoxyribonuclease III [Propionibacterium acnes HL053PA1] gi|314976933|gb|EFT21028.1| exodeoxyribonuclease III [Propionibacterium acnes HL045PA1] gi|314979892|gb|EFT23986.1| exodeoxyribonuclease III [Propionibacterium acnes HL072PA2] gi|314985810|gb|EFT29902.1| exodeoxyribonuclease III [Propionibacterium acnes HL005PA1] gi|314988407|gb|EFT32498.1| exodeoxyribonuclease III [Propionibacterium acnes HL005PA2] gi|314988831|gb|EFT32922.1| exodeoxyribonuclease III [Propionibacterium acnes HL005PA3] gi|315079798|gb|EFT51774.1| exodeoxyribonuclease III [Propionibacterium acnes HL078PA1] gi|315084894|gb|EFT56870.1| exodeoxyribonuclease III [Propionibacterium acnes HL027PA2] gi|315087238|gb|EFT59214.1| exodeoxyribonuclease III [Propionibacterium acnes HL002PA3] gi|315088971|gb|EFT60947.1| exodeoxyribonuclease III [Propionibacterium acnes HL072PA1] gi|315096818|gb|EFT68794.1| exodeoxyribonuclease III [Propionibacterium acnes HL038PA1] gi|315100579|gb|EFT72555.1| exodeoxyribonuclease III [Propionibacterium acnes HL046PA1] gi|315109351|gb|EFT81327.1| exodeoxyribonuclease III [Propionibacterium acnes HL030PA2] gi|327325640|gb|EGE67438.1| exodeoxyribonuclease III [Propionibacterium acnes HL096PA2] gi|327328234|gb|EGE70001.1| exodeoxyribonuclease III [Propionibacterium acnes HL096PA3] gi|327445310|gb|EGE91964.1| exodeoxyribonuclease III [Propionibacterium acnes HL043PA1] gi|327446951|gb|EGE93605.1| exodeoxyribonuclease III [Propionibacterium acnes HL043PA2] gi|327449053|gb|EGE95707.1| exodeoxyribonuclease III [Propionibacterium acnes HL013PA2] gi|327452601|gb|EGE99255.1| exodeoxyribonuclease III [Propionibacterium acnes HL087PA3] gi|327457644|gb|EGF04299.1| exodeoxyribonuclease III [Propionibacterium acnes HL083PA2] gi|328751915|gb|EGF65531.1| exodeoxyribonuclease III [Propionibacterium acnes HL087PA1] gi|328756939|gb|EGF70555.1| exodeoxyribonuclease III [Propionibacterium acnes HL020PA1] gi|328759048|gb|EGF72664.1| exodeoxyribonuclease III [Propionibacterium acnes HL025PA2] gi|328762251|gb|EGF75743.1| exodeoxyribonuclease III [Propionibacterium acnes HL099PA1] gi|332676289|gb|AEE73105.1| exodeoxyribonuclease III [Propionibacterium acnes 266] Length = 297 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 83/320 (25%), Gaps = 64/320 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ S+NIN + +L + +R + D D++ LQE+ A + Sbjct: 1 MRIASFNINGIRA----ALKRGFSERMEAR-----------DCDVIGLQEVRCRPA--DL 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA---VRKKNVRVLQQSYPLLGAKDSFSRA 140 S + TA A ++ + P + + Sbjct: 44 PEGAFGDRHVSWAPGSLAGRNGVALLTRTAPAEVRSWGTHLVMAPGQAPTPAQALTGNTD 103 Query: 141 GNRRAV--------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 G + + V++ + V ++L D + Sbjct: 104 GLPTELLPFADEGRYIEVDLADTPLTVACLYLPKGATPDPANEKTIAKQDRKMAFLTGFR 163 Query: 193 DWI----TQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPND 232 D + + F++ GDFN F + P+ Sbjct: 164 DHLVRRRQECTTQGRHFLVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDT 223 Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + IDY + I D Sbjct: 224 LIDVVRAQHPDTNGPYSWWSWRGKAFVNDAGWRIDYHLASPELASKAITAEI-------D 276 Query: 284 DIKSRGKRLSDHCPISIDYD 303 S +R SDH + +DYD Sbjct: 277 RDPSYSERTSDHAAVVVDYD 296 >gi|145299175|ref|YP_001142016.1| extracellular nuclease [Aeromonas salmonicida subsp. salmonicida A449] gi|142851947|gb|ABO90268.1| extracellular nuclease [Aeromonas salmonicida subsp. salmonicida A449] Length = 1072 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 46/367 (12%), Positives = 92/367 (25%), Gaps = 84/367 (22%) Query: 19 SVAQKVRLVSWNINTLSE--------QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + A +R+ S+N+ G + +V T + L+AD+V Sbjct: 472 AEAGDLRVASFNVLNFFTTVVGGDANPTGSNRGALTVAEFEKQRTKIVSAITRLNADVVG 531 Query: 71 LQEMGSYNA--------VAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNV 121 L E+ + + + + + + D I + R +V Sbjct: 532 LMEIENNGYGDNSAIANLVEALNAAQPDEADHYRLIASPDGQPIGTDAITVGLIYRPASV 591 Query: 122 R-----------VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK--KIWVLDIHLKSFC 168 V Q K G R +V + ++ HLKS Sbjct: 592 TPQGAASLIVLPVQQAEALDASGKPVAINQGMRESVLQQFSSPKGDAPLTLVVNHLKSKG 651 Query: 169 FLDSLENTYSPSCSLLSQQ----------AQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 + S L Q A+ L + + +I GD N Sbjct: 652 SACFEDYPDYASADPLDGQGHCNALRVSAAKVLGESLKALSGD---LLIIGDLNAYGMED 708 Query: 219 GNN---------------DDFWKTI-------------DPNDSLIRFPKEKDSRCNANKN 250 + T+ + + + + + Sbjct: 709 PIRVLTSYDPAAQPRQIMSASFTTLAGQPFEESGSALGNGYGFVNLNTRFHGTDTYSYSY 768 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------------LSDHCP 297 +D+ + + + +I I E + G + SDH P Sbjct: 769 EGELGNLDHALANPSLAAKVIGIEDWHINSAESNFFEYGSKYTGQLAKSDGPFSASDHDP 828 Query: 298 ISIDYDF 304 + + + Sbjct: 829 VLVAIQY 835 >gi|86747505|ref|YP_484001.1| exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2] gi|86570533|gb|ABD05090.1| exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2] Length = 270 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 33/307 (10%), Positives = 71/307 (23%), Gaps = 65/307 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L +WNIN L+ ++ K D++ LQE Sbjct: 2 SFTLTTWNIN----------------SVRLRIELVAKFLKAQRPDVLCLQETKCP---DD 42 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP + RL + + +AV K + DS Sbjct: 43 AFPAKRFK------RLGYEHIALNGQKGYHGVAVISKIPFLATDIRTFCDNIDSRH---- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + + ++ +L + D + +P ++ Sbjct: 93 ---ISVSLQTGAADPPLLLHNFYVPAGGDIPDPEANPKFKHKLSFLDEMRACAPLHPSGD 149 Query: 203 VPFVIAGDFNRKINYLGNN----------------DDFWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD N + D + + + Sbjct: 150 ARHILVGDLNVAPHEHDVWSHKQLLKVVSHTPVECDKLLAVQAAGNWVDVARERIPLSEK 209 Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ + + + +R SDH Sbjct: 210 IYTWWSYRAADWTIGDRGRRLDHIWVSEALR-------ARVTDFKILRDARSWERPSDHV 262 Query: 297 PISIDYD 303 P+++ + Sbjct: 263 PVTVTME 269 >gi|86359550|ref|YP_471442.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42] gi|86283652|gb|ABC92715.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42] Length = 267 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 78/307 (25%), Gaps = 68/307 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +WNIN ++ Q+ DI+ LQE N + Sbjct: 3 FSITTWNIN----------------SVRLRMPIVEQFVLKHRPDILCLQETKVPNELFPA 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P + + +A+ + + G D+ Sbjct: 47 APL---------RAMGYDHIIIHGQKGYHGVAIASRIPLMEDHRQDYCGVGDARH----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + E +++ + + ++ + D + T +P + + + E+ Sbjct: 93 --ISAVFERGNRRVRLHNFYVPAG--GDEPDRTINPKFGHKLDFIEEM-KLLKANGEANT 147 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N + D + + L + + Sbjct: 148 SAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETDGLLEVMKRGAWLDLMRQHVPASEKL 207 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + L R SDH P Sbjct: 208 YTWWSYRAKDWQAADRGRRLDHIWSSSDLGPHLQ-------RIEILKEARGWDRPSDHVP 260 Query: 298 ISIDYDF 304 ++ +DF Sbjct: 261 VTAHFDF 267 >gi|49478354|ref|YP_037804.1| exodeoxyribonuclease III [Bacillus thuringiensis serovar konkukian str. 97-27] gi|301055229|ref|YP_003793440.1| exodeoxyribonuclease III [Bacillus anthracis CI] gi|49329910|gb|AAT60556.1| exodeoxyribonuclease III [Bacillus thuringiensis serovar konkukian str. 97-27] gi|300377398|gb|ADK06302.1| exodeoxyribonuclease III [Bacillus cereus biovar anthracis str. CI] Length = 252 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 32/305 (10%), Positives = 80/305 (26%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + +Y + +ADI +QE+ + Sbjct: 1 MKFISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCVQEIKLQEGQIDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + ++ A+ K + + D R Sbjct: 47 NVEGYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + L + Sbjct: 92 -----VITLEFEDFYIITLYTPNSKRGLERLEYRMKWEDDFRAYIKRL--------DEKK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V GD N + + + I + + + A Sbjct: 139 SVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTCILEEGFIDTYRYLYPDQEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV+ + + + + SDHCP+ Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDQITAAKINSEV-----------MGSDHCPVE 247 Query: 300 IDYDF 304 + +F Sbjct: 248 LHINF 252 >gi|34763743|ref|ZP_00144662.1| Exodeoxyribonuclease III [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886479|gb|EAA23735.1| Exodeoxyribonuclease III [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 253 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 82/305 (26%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + + Y +ADI LQE +A Sbjct: 1 MKLISWNVNGIRA---------------AIKKGFLDYFNEQNADIFCLQETK-LSAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + G R Sbjct: 45 LELKGYHQYWNYAEKKGY----------SGTAIFTKQEPLSVS----YGLGIEEHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +K +++ ++ + + ++ ++ Sbjct: 91 -----VITLEFEKFYMVTVYTPN-------SKDELLRLDYRMTWEDEFRKYLKNLEKKK- 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + + + F + Sbjct: 138 PVVVCGDLNVAHEEIDLKNPKTNRRNAGFTDEERGKFTELLDSGFVDTFRYFYPNLEQVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + K L+ + SDHCP+ Sbjct: 198 SWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEIHTQI-----------EGSDHCPVV 246 Query: 300 IDYDF 304 + DF Sbjct: 247 LILDF 251 >gi|224582626|ref|YP_002636424.1| hypothetical protein SPC_0810 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224467153|gb|ACN44983.1| hypothetical protein SPC_0810 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 252 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 77/288 (26%), Gaps = 54/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ N + LR + + ADIV LQE+ + V Sbjct: 9 SFKVLTINTHKGFTAFNKRF----------ILPELRDAVRTVGADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P T F + + + + + H AV + S Sbjct: 59 LHIENWPDTTHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R + + + I V+ +HL S Q L W Sbjct: 114 VGGSEKRGVLYCRITPPMLNRPIHVMCVHLGLR-------------ESHRQAQLTMLAGW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + P ++AGDFN G ++ F + Sbjct: 161 VNA-LPESEPVLVAGDFNDWRQKAGP------PLNAAGLEEIFTRAHGRPARTFPVSMPL 213 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + LSDH P+S + Sbjct: 214 LRLDRIYVKNANASS-----------PTALPLRNWRHLSDHAPLSAEI 250 >gi|327405504|ref|YP_004346342.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM 16823] gi|327321012|gb|AEA45504.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM 16823] Length = 375 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 38/294 (12%), Positives = 80/294 (27%), Gaps = 55/294 (18%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 ++S+N+ +N + +Y + ++ D+V QE + + Sbjct: 107 VMSYNVRLFDVYNSSLAGRNES------RNNIVKYIQEVNPDVVCFQEFFHQDKPSSFST 160 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 ++T + N + I + K + + K + + Sbjct: 161 RDTLIDLLDYKYYHERYSHRIRNRQNFGICMLSKYPIIAKGDVMFENFKTTDN-----YC 215 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLE---------------------NTYSPSCSLL 184 + + I +IHL+S + + Sbjct: 216 IFADIVKGDDTIRFYNIHLQSIKLQQEDYELFGEKNKQAGGKKSTARLLIDKLRIAYPER 275 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 ++QA+ + + + S P VI GDFN N +D + F + + Sbjct: 276 AEQAERVVEHLKT---SPYPVVICGDFNDTPMSYVYNQ------FNSDLVDSFRETQTGI 326 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 IDY + + + Y SDH + Sbjct: 327 GITYVGRVPAGRIDYIFHSGDLGA--VNFQIQAVPY------------SDHRAV 366 >gi|330952963|gb|EGH53223.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae Cit 7] Length = 380 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 46/342 (13%), Positives = 94/342 (27%), Gaps = 75/342 (21%) Query: 11 FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53 C +V Q +++++WNI L+ + + + + Sbjct: 52 LLTASCNPAVEAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYN 111 Query: 54 YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99 + + ++ DIV LQ + VA ++P +T ++ E + Sbjct: 112 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYQDQLALIKERVADLYPCSTQAFYWKAEFVP 171 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKI 157 N S A R + P+ A + + A+ + +G K+ Sbjct: 172 NPHIWGS-VGRKLATLSRFHIDSAERIQLPVPDANIISRQFQPKDALLVSYLPLRDGGKL 230 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 V++ L T + +Q + + + + P++I GDFN Sbjct: 231 AVINTSLT----------TARHAGDTAPKQVAATETQLDKLESGGTPWLIGGDFNLLPLG 280 Query: 218 LGNNDDFWKTIDPNDSLIR-------------FPKEKDSRCNANKNLRNKIPI------- 257 + + R + N I Sbjct: 281 QYQRLPEEQRLGYAADSELHALWEKYPMIPDNAESSGIDRSKWLTHFPNDSRINGPDRTV 340 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 DY + + S + +SDH P+ Sbjct: 341 DYLFYSPSLKR----VSARV-------RRDDTLLISDHLPVI 371 >gi|327312703|ref|YP_004328140.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola F0289] gi|326944135|gb|AEA20020.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola F0289] Length = 366 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 93/334 (27%), Gaps = 81/334 (24%) Query: 2 IRKYVLALVFFLV---------PCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKR 49 +R L+L+ FL+ P + ++++S+N+ S +N Sbjct: 67 LRTVWLSLLGFLLCYGPVRTYSPFNLPEEKPHGSIKVLSYNVFMFSIWSEPGGEQNP--- 123 Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108 + Y ADIV LQE S +++P Y + D Sbjct: 124 -------IVDYILKSKADIVCLQEAQASMEGTDRIYPALKKHYPYFRLMVKKKPGADH-- 174 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 + + + + Q S P + V+I G K V++ HL+S Sbjct: 175 -----MVLLSRYPVLWQDSIPYGSNSNQSVAYM--------VDIKGTKTLVVNNHLESNG 221 Query: 169 FLDSLENTYSPSCS------------------------LLSQQAQWLKDWITQKKESLVP 204 + + + QA+ + ++ + + VP Sbjct: 222 LSTDDKEEFKTLVKGNMGTGEAKDESFHLLRKLGSVSVRRAPQAEAVARYVRKYLDRKVP 281 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 ++ GDFN + + + + + + ID+ Sbjct: 282 VILCGDFNDSPLSYT-HRTIARELTD-----CYVASGNGPGISYHKSGMYFRIDHIFCSD 335 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + SDH PI Sbjct: 336 DF----EPYGAKVDNSVT---------ASDHYPI 356 >gi|163844025|ref|YP_001628429.1| exodeoxyribonuclease III (xth) [Brucella suis ATCC 23445] gi|163674748|gb|ABY38859.1| exodeoxyribonuclease III (xth) [Brucella suis ATCC 23445] Length = 268 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 79/306 (25%), Gaps = 68/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +WNIN L+ Q+ ++ D++ LQE + Sbjct: 3 FSIATWNIN----------------SVRLRMPLVEQFLRDYQPDVLCLQETKCP---DDL 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + S + +A + + D Sbjct: 44 FPAKGFRAL------GYEHIAISGQKGYHGVATVSRRPLDGVEKVDFCNMGDCRH----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +VE +K+ + + ++ + D + +P + + ++ I +K+ Sbjct: 93 --LSAVVEAGDRKLRIHNFYVPAG--GDEPDPEINPKFAHKLAFLEEMRAIIADRKD-GC 147 Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247 ++ GD N N + ++ K + + Sbjct: 148 SSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETETLENLRIKGGWSDLMRHLIAADQKI 207 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + R SDH P Sbjct: 208 YTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG-------LQVLRDARGWDRPSDHVP 260 Query: 298 ISIDYD 303 + +D Sbjct: 261 VIATFD 266 >gi|120401745|ref|YP_951574.1| exodeoxyribonuclease III Xth [Mycobacterium vanbaalenii PYR-1] gi|119954563|gb|ABM11568.1| Exodeoxyribonuclease III [Mycobacterium vanbaalenii PYR-1] Length = 272 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 30/305 (9%), Positives = 73/305 (23%), Gaps = 61/305 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N + + + + D D++ +QE + Sbjct: 1 MRLATWNVN----------------SIRARVDRVTDWLERADVDVLAMQETKCSDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + + + Sbjct: 41 ------QFPTMPFAALGYEIVHCGFNQWNGVAIASRVGIDDVEVGFDGQPTWNDKPEVEA 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202 A + + V +++ + +DS Y + L+D + ES Sbjct: 95 AAEARALGATCGGVRVWSLYVPNGRTVDSPHYVYK------LEWLAALRDTASSWLESNP 148 Query: 203 -VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P + GD+N + + + Sbjct: 149 SAPIALVGDWNIAPIDDDVWDISLFQDSTHVTEPERAAFNAVVDAGFTDVVRPFTPGP-G 207 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 ID+ + + ++ + + SDH P Sbjct: 208 TFTYWDYTQLRFPKNRGMRIDFILGSPALAERVVHAEIARDERKTGKNRVGS--PSDHAP 265 Query: 298 ISIDY 302 + +D Sbjct: 266 VVVDL 270 >gi|332024107|gb|EGI64323.1| Recombination repair protein 1 [Acromyrmex echinatior] Length = 356 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 83/305 (27%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +++ +WN+ S R L Y DADI+ LQE + Sbjct: 104 LKICTWNV--------------SGIRAVIKKHGL-DYITKEDADIIALQETKCDKGKMPD 148 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + ++ + + +A+ K + + G DS Sbjct: 149 EVKLPGYHHYFLDSKKPGY----------CGVALFSKEKPISVK----YGLNDSTFDTEG 194 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + + +V+++++ + L + + L Sbjct: 195 RI-----ITVEFPEFFVINVYVPNAGQKLVTLPKRLEWNKLFKKHIEELDQ--------K 241 Query: 203 VPFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCNA-------- 247 P +I GD N + + + + ND + Sbjct: 242 KPVIICGDMNVAHQEIDLKNPKTNTKNAGFTKEERNDMTDFLAAGFIDTFRSLYPEIEGA 301 Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +DYF++ + + D+I + SDHCP+ Sbjct: 302 YTFWSYFANARSKNIGWRLDYFLISERIKNKVC-----------DNIIRKDVYGSDHCPV 350 Query: 299 SIDYD 303 + + Sbjct: 351 ILYIN 355 >gi|229822126|ref|YP_002883652.1| exodeoxyribonuclease III Xth [Beutenbergia cavernae DSM 12333] gi|229568039|gb|ACQ81890.1| exodeoxyribonuclease III Xth [Beutenbergia cavernae DSM 12333] Length = 263 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 33/302 (10%), Positives = 83/302 (27%), Gaps = 67/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + + + D D++ LQE + Sbjct: 1 MRIATWNVN----------------SIRARAERVAAWLERSDVDVLALQE---TKVPDEQ 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP ++ + + +A+ + + LG + Sbjct: 42 FPVMSFAAV-------GYDVVHHGHSQWNGVAIVSRVGIDDVE----LGFPGQPTWGDPA 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES-L 202 A + + + +++ + L+ Y + L+D Sbjct: 91 VAEARALGATCGGVRLWSLYVPNGRTLEDPHYAYKLD------WLRALRDAAATWAAEPG 144 Query: 203 VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 +AGD+N + + +D + + Sbjct: 145 AQVALAGDWNIAPLDEDVWDMSLFDGATHVSPAERAAFAALDDAGFAE-VTRLHVPQAYT 203 Query: 248 NKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + + ID+ + + + + D + +GK SDH P+ + Sbjct: 204 YWDYQRLRFPRNEGMRIDFVLATRALAERVAAVGI-------DREERKGKGASDHVPVVV 256 Query: 301 DY 302 + Sbjct: 257 EI 258 >gi|15800541|ref|NP_286553.1| hypothetical protein Z1009 [Escherichia coli O157:H7 EDL933] gi|15830122|ref|NP_308895.1| hypothetical protein ECs0868 [Escherichia coli O157:H7 str. Sakai] gi|16128758|ref|NP_415311.1| conserved protein, endo/exonuclease/phosphatase family PFAM PF03372 [Escherichia coli str. K-12 substr. MG1655] gi|24112158|ref|NP_706668.1| hypothetical protein SF0740 [Shigella flexneri 2a str. 301] gi|26246763|ref|NP_752803.1| hypothetical protein c0873 [Escherichia coli CFT073] gi|30062275|ref|NP_836446.1| hypothetical protein S0781 [Shigella flexneri 2a str. 2457T] gi|74311333|ref|YP_309752.1| hypothetical protein SSON_0769 [Shigella sonnei Ss046] gi|89107641|ref|AP_001421.1| predicted DNase [Escherichia coli str. K-12 substr. W3110] gi|91209822|ref|YP_539808.1| putative DNase [Escherichia coli UTI89] gi|110804791|ref|YP_688311.1| hypothetical protein SFV_0773 [Shigella flexneri 5 str. 8401] gi|168764306|ref|ZP_02789313.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4501] gi|168787004|ref|ZP_02812011.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC869] gi|168799936|ref|ZP_02824943.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC508] gi|170080449|ref|YP_001729769.1| DNase [Escherichia coli str. K-12 substr. DH10B] gi|170684095|ref|YP_001742893.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli SMS-3-5] gi|191169284|ref|ZP_03031034.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli B7A] gi|193064436|ref|ZP_03045517.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli E22] gi|193069403|ref|ZP_03050358.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli E110019] gi|194428175|ref|ZP_03060718.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli B171] gi|194433120|ref|ZP_03065402.1| endonuclease/exonuclease/phosphatase family protein [Shigella dysenteriae 1012] gi|209918036|ref|YP_002292120.1| endonuclease/exonuclease/phosphatase [Escherichia coli SE11] gi|215485878|ref|YP_002328309.1| predicted DNase [Escherichia coli O127:H6 str. E2348/69] gi|217324324|ref|ZP_03440408.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. TW14588] gi|218553374|ref|YP_002386287.1| putative metal-dependent hydrolase [Escherichia coli IAI1] gi|218557695|ref|YP_002390608.1| metal-dependent hydrolase [Escherichia coli S88] gi|218688576|ref|YP_002396788.1| putative metal-dependent hydrolase [Escherichia coli ED1a] gi|218694264|ref|YP_002401931.1| putative metal-dependent hydrolase [Escherichia coli 55989] gi|218704168|ref|YP_002411687.1| putative metal-dependent hydrolase [Escherichia coli UMN026] gi|227884248|ref|ZP_04002053.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli 83972] gi|237707251|ref|ZP_04537732.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|238900049|ref|YP_002925845.1| putative DNase [Escherichia coli BW2952] gi|256021140|ref|ZP_05435005.1| putative DNase [Shigella sp. D9] gi|256023614|ref|ZP_05437479.1| putative DNase [Escherichia sp. 4_1_40B] gi|260843033|ref|YP_003220811.1| putative DNase [Escherichia coli O103:H2 str. 12009] gi|260866957|ref|YP_003233359.1| putative DNase [Escherichia coli O111:H- str. 11128] gi|261225437|ref|ZP_05939718.1| putative DNase [Escherichia coli O157:H7 str. FRIK2000] gi|261258594|ref|ZP_05951127.1| putative DNase [Escherichia coli O157:H7 str. FRIK966] gi|291281787|ref|YP_003498605.1| hypothetical protein G2583_1018 [Escherichia coli O55:H7 str. CB9615] gi|293404090|ref|ZP_06648084.1| ybhP protein [Escherichia coli FVEC1412] gi|293409167|ref|ZP_06652743.1| ybhP protein [Escherichia coli B354] gi|293414069|ref|ZP_06656718.1| ybhP protein [Escherichia coli B185] gi|293433051|ref|ZP_06661479.1| ybhP protein [Escherichia coli B088] gi|298379871|ref|ZP_06989476.1| ybhP protein [Escherichia coli FVEC1302] gi|300816436|ref|ZP_07096658.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 107-1] gi|300898278|ref|ZP_07116629.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 198-1] gi|300907118|ref|ZP_07124784.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 84-1] gi|300920037|ref|ZP_07136496.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 115-1] gi|300993265|ref|ZP_07180312.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 45-1] gi|301020719|ref|ZP_07184787.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 69-1] gi|301024514|ref|ZP_07188190.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 196-1] gi|301051290|ref|ZP_07198116.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 185-1] gi|301306923|ref|ZP_07212967.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 124-1] gi|307137414|ref|ZP_07496770.1| hypothetical protein EcolH7_04690 [Escherichia coli H736] gi|307313800|ref|ZP_07593417.1| Endonuclease/exonuclease/phosphatase [Escherichia coli W] gi|309797967|ref|ZP_07692346.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 145-7] gi|312969189|ref|ZP_07783396.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli 2362-75] gi|331641303|ref|ZP_08342438.1| putative cytoplasmic protein [Escherichia coli H736] gi|331646007|ref|ZP_08347110.1| putative cytoplasmic protein [Escherichia coli M605] gi|331651793|ref|ZP_08352812.1| putative cytoplasmic protein [Escherichia coli M718] gi|331656807|ref|ZP_08357769.1| putative cytoplasmic protein [Escherichia coli TA206] gi|331672300|ref|ZP_08373091.1| putative cytoplasmic protein [Escherichia coli TA280] gi|332282366|ref|ZP_08394779.1| conserved hypothetical protein [Shigella sp. D9] gi|77416769|sp|P0AAW3|YBHP_ECO57 RecName: Full=Uncharacterized protein ybhP gi|77416770|sp|P0AAW2|YBHP_ECOL6 RecName: Full=Uncharacterized protein ybhP gi|77416771|sp|P0AAW1|YBHP_ECOLI RecName: Full=Uncharacterized protein ybhP gi|77416772|sp|P0AAW4|YBHP_SHIFL RecName: Full=Uncharacterized protein ybhP gi|12513779|gb|AAG55161.1|AE005259_12 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|26107162|gb|AAN79346.1|AE016757_250 Hypothetical protein ybhP [Escherichia coli CFT073] gi|1787008|gb|AAC73877.1| conserved protein, endo/exonuclease/phosphatase family PFAM PF03372 [Escherichia coli str. K-12 substr. MG1655] gi|4062347|dbj|BAA35449.1| predicted DNase [Escherichia coli str. K12 substr. W3110] gi|13360327|dbj|BAB34291.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|24050995|gb|AAN42375.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30040520|gb|AAP16252.1| hypothetical protein S0781 [Shigella flexneri 2a str. 2457T] gi|73854810|gb|AAZ87517.1| conserved hypothetical protein [Shigella sonnei Ss046] gi|91071396|gb|ABE06277.1| putative DNase [Escherichia coli UTI89] gi|110614339|gb|ABF03006.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] gi|169888284|gb|ACB01991.1| predicted DNase [Escherichia coli str. K-12 substr. DH10B] gi|170521813|gb|ACB19991.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli SMS-3-5] gi|189365678|gb|EDU84094.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4501] gi|189373043|gb|EDU91459.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC869] gi|189377721|gb|EDU96137.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC508] gi|190900673|gb|EDV60472.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli B7A] gi|192928898|gb|EDV82511.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli E22] gi|192957356|gb|EDV87804.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli E110019] gi|194413735|gb|EDX30014.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli B171] gi|194418617|gb|EDX34704.1| endonuclease/exonuclease/phosphatase family protein [Shigella dysenteriae 1012] gi|209775978|gb|ACI86301.1| hypothetical protein ECs0868 [Escherichia coli] gi|209775980|gb|ACI86302.1| hypothetical protein ECs0868 [Escherichia coli] gi|209775982|gb|ACI86303.1| hypothetical protein ECs0868 [Escherichia coli] gi|209775984|gb|ACI86304.1| hypothetical protein ECs0868 [Escherichia coli] gi|209911295|dbj|BAG76369.1| endonuclease/exonuclease/phosphatase [Escherichia coli SE11] gi|215263950|emb|CAS08290.1| predicted DNase [Escherichia coli O127:H6 str. E2348/69] gi|217320545|gb|EEC28969.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. TW14588] gi|218350996|emb|CAU96700.1| putative metal-dependent hydrolase [Escherichia coli 55989] gi|218360142|emb|CAQ97691.1| putative metal-dependent hydrolase [Escherichia coli IAI1] gi|218364464|emb|CAR02146.1| putative metal-dependent hydrolase [Escherichia coli S88] gi|218426140|emb|CAR06960.1| putative metal-dependent hydrolase [Escherichia coli ED1a] gi|218431265|emb|CAR12143.1| putative metal-dependent hydrolase [Escherichia coli UMN026] gi|222032521|emb|CAP75260.1| Uncharacterized protein ybhP [Escherichia coli LF82] gi|226898461|gb|EEH84720.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|227839000|gb|EEJ49466.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli 83972] gi|238862335|gb|ACR64333.1| predicted DNase [Escherichia coli BW2952] gi|257758180|dbj|BAI29677.1| predicted DNase [Escherichia coli O103:H2 str. 12009] gi|257763313|dbj|BAI34808.1| predicted DNase [Escherichia coli O111:H- str. 11128] gi|260450063|gb|ACX40485.1| Endonuclease/exonuclease/phosphatase [Escherichia coli DH1] gi|281600115|gb|ADA73099.1| Metal-dependent hydrolase [Shigella flexneri 2002017] gi|284920642|emb|CBG33705.1| putative endonuclease/exonuclease/phosphatase [Escherichia coli 042] gi|290761660|gb|ADD55621.1| hypothetical protein G2583_1018 [Escherichia coli O55:H7 str. CB9615] gi|291323870|gb|EFE63292.1| ybhP protein [Escherichia coli B088] gi|291428676|gb|EFF01701.1| ybhP protein [Escherichia coli FVEC1412] gi|291434127|gb|EFF07100.1| ybhP protein [Escherichia coli B185] gi|291469635|gb|EFF12119.1| ybhP protein [Escherichia coli B354] gi|294491262|gb|ADE90018.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli IHE3034] gi|298279569|gb|EFI21077.1| ybhP protein [Escherichia coli FVEC1302] gi|299880367|gb|EFI88578.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 196-1] gi|300297049|gb|EFJ53434.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 185-1] gi|300358067|gb|EFJ73937.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 198-1] gi|300398530|gb|EFJ82068.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 69-1] gi|300401163|gb|EFJ84701.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 84-1] gi|300406673|gb|EFJ90211.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 45-1] gi|300412984|gb|EFJ96294.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 115-1] gi|300531126|gb|EFK52188.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 107-1] gi|300837849|gb|EFK65609.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 124-1] gi|306906440|gb|EFN36954.1| Endonuclease/exonuclease/phosphatase [Escherichia coli W] gi|307552635|gb|ADN45410.1| endonuclease/exonuclease/phosphatase family [Escherichia coli ABU 83972] gi|307627800|gb|ADN72104.1| hypothetical protein UM146_13695 [Escherichia coli UM146] gi|308118455|gb|EFO55717.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 145-7] gi|309701068|emb|CBJ00366.1| putative endonuclease/exonuclease/phosphatase [Escherichia coli ETEC H10407] gi|312286591|gb|EFR14504.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli 2362-75] gi|312945308|gb|ADR26135.1| putative DNase [Escherichia coli O83:H1 str. NRG 857C] gi|313650312|gb|EFS14724.1| endonuclease/Exonuclease/phosphatase family protein [Shigella flexneri 2a str. 2457T] gi|315060026|gb|ADT74353.1| predicted DNase [Escherichia coli W] gi|315135440|dbj|BAJ42599.1| hypothetical protein ECDH1ME8569_0743 [Escherichia coli DH1] gi|315257776|gb|EFU37744.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 85-1] gi|315287185|gb|EFU46597.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 110-3] gi|315292598|gb|EFU51950.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 153-1] gi|315619791|gb|EFV00310.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli 3431] gi|320178501|gb|EFW53466.1| Endonuclease/Exonuclease/phosphatase family protein [Shigella boydii ATCC 9905] gi|320192735|gb|EFW67376.1| Endonuclease/Exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC1212] gi|320196715|gb|EFW71338.1| Endonuclease/Exonuclease/phosphatase family protein [Escherichia coli WV_060327] gi|320637652|gb|EFX07444.1| hypothetical protein ECO5101_22645 [Escherichia coli O157:H7 str. G5101] gi|320642778|gb|EFX11979.1| hypothetical protein ECO9389_02401 [Escherichia coli O157:H- str. 493-89] gi|320648234|gb|EFX16889.1| hypothetical protein ECO2687_18506 [Escherichia coli O157:H- str. H 2687] gi|320659694|gb|EFX27250.1| hypothetical protein ECO5905_24328 [Escherichia coli O55:H7 str. USDA 5905] gi|320664164|gb|EFX31315.1| hypothetical protein ECOSU61_00998 [Escherichia coli O157:H7 str. LSU-61] gi|323159720|gb|EFZ45698.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli E128010] gi|323165708|gb|EFZ51494.1| endonuclease/Exonuclease/phosphatase family protein [Shigella sonnei 53G] gi|323172094|gb|EFZ57733.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli LT-68] gi|323175592|gb|EFZ61187.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli 1180] gi|323185054|gb|EFZ70420.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli 1357] gi|323190916|gb|EFZ76183.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli RN587/1] gi|323379415|gb|ADX51683.1| Endonuclease/exonuclease/phosphatase [Escherichia coli KO11] gi|323938145|gb|EGB34405.1| endonuclease/Exonuclease/phosphatase [Escherichia coli E1520] gi|323942663|gb|EGB38828.1| endonuclease/Exonuclease/phosphatase [Escherichia coli E482] gi|323947052|gb|EGB43065.1| endonuclease/Exonuclease/phosphatase [Escherichia coli H120] gi|323953547|gb|EGB49413.1| endonuclease/Exonuclease/phosphatase [Escherichia coli H252] gi|323958079|gb|EGB53788.1| endonuclease/Exonuclease/phosphatase [Escherichia coli H263] gi|323971955|gb|EGB67176.1| endonuclease/Exonuclease/phosphatase [Escherichia coli TA007] gi|324009624|gb|EGB78843.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 57-2] gi|324018520|gb|EGB87739.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 117-3] gi|324116214|gb|EGC10136.1| endonuclease/Exonuclease/phosphatase [Escherichia coli E1167] gi|326338324|gb|EGD62153.1| Endonuclease/Exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. 1125] gi|326346302|gb|EGD70040.1| Endonuclease/Exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. 1044] gi|330910533|gb|EGH39043.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli AA86] gi|331038101|gb|EGI10321.1| putative cytoplasmic protein [Escherichia coli H736] gi|331044759|gb|EGI16886.1| putative cytoplasmic protein [Escherichia coli M605] gi|331050071|gb|EGI22129.1| putative cytoplasmic protein [Escherichia coli M718] gi|331055055|gb|EGI27064.1| putative cytoplasmic protein [Escherichia coli TA206] gi|331070495|gb|EGI41859.1| putative cytoplasmic protein [Escherichia coli TA280] gi|332091084|gb|EGI96174.1| endonuclease/Exonuclease/phosphatase family protein [Shigella dysenteriae 155-74] gi|332104718|gb|EGJ08064.1| conserved hypothetical protein [Shigella sp. D9] gi|332759689|gb|EGJ89992.1| endonuclease/Exonuclease/phosphatase family protein [Shigella flexneri 4343-70] gi|332760512|gb|EGJ90801.1| endonuclease/Exonuclease/phosphatase family protein [Shigella flexneri 2747-71] gi|332763280|gb|EGJ93522.1| endonuclease/Exonuclease/phosphatase family protein [Shigella flexneri K-671] gi|332767952|gb|EGJ98138.1| endonuclease/Exonuclease/phosphatase family protein [Shigella flexneri 2930-71] gi|333006910|gb|EGK26406.1| endonuclease/Exonuclease/phosphatase family protein [Shigella flexneri VA-6] gi|333007139|gb|EGK26631.1| endonuclease/Exonuclease/phosphatase family protein [Shigella flexneri K-218] gi|333021184|gb|EGK40440.1| endonuclease/Exonuclease/phosphatase family protein [Shigella flexneri K-304] Length = 253 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 82/288 (28%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ NI+ LR + + ADIV LQE+ + V Sbjct: 9 SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P + F + + + + + H AV + S Sbjct: 59 LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A R + + GK I V+ +HL + Q L +W Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + P ++AGDFN + +D F + Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + LSDH P+S + Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251 >gi|319954283|ref|YP_004165550.1| endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM 14237] gi|319422943|gb|ADV50052.1| Endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM 14237] Length = 339 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 39/323 (12%), Positives = 95/323 (29%), Gaps = 70/323 (21%) Query: 3 RKYVLALVFFLVPCTASVA-------------QKVRLVSWNINTLSEQEGVSLWKNSVKR 49 ++ + + LV + + + ++++N+ + ++ + + Sbjct: 66 KRALFSFFVLLVSYVSLSSFFKLRFSNPTDTTADLSVMTFNVRSFNKNMNI--------K 117 Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 T+ + + D DI+ QE + + N Sbjct: 118 NTAVFEETLELITTEDPDIICFQEF-------------YYKKQKDFKNYKYMYLEYIKNP 164 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 + K + + + ++ A + + + + V ++HL+S Sbjct: 165 GKVKLGFYSKYPIINKGLINFPESPNN--------AAFVDIVVKNDTVRVYNLHLESLRV 216 Query: 170 LDSLENTYSPSCSLLSQQAQ--------WLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 + + L ++ + K +S +I GDFN Sbjct: 217 IPDKDIIAQEESKKLYRRLTNSFKKQQQQAQIIKEHKDKSPYRAIICGDFNGT-----QY 271 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + +KTI + K + ID+ ++ E +N Sbjct: 272 SNVYKTIRGDMQDTFQEKGSGYG-RTYNFRYYPVRIDFILV--------------EDSFN 316 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 K+ +LSDH P+ ++F Sbjct: 317 VLSHKNYNVKLSDHFPVMTSFNF 339 >gi|311894312|dbj|BAJ26720.1| hypothetical protein KSE_08830 [Kitasatospora setae KM-6054] Length = 325 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 102/324 (31%), Gaps = 40/324 (12%) Query: 6 VLALVFFLVPCTASVAQ---------KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 VLA+ L+ T ++A + ++S+N +S L+ N + + Sbjct: 12 VLAIAASLLTSTQTLAHAETAPAAVAPLDVLSYNTFLMSTS----LYPNWGQAQRAQAIA 67 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFY--------STERLINHSKRDSNN 108 + + D+V LQE A + K + Y ++ Sbjct: 68 GADFFQGH--DVVVLQEAFDNAASDALAAKASAAYPYRTPVVGRSTSGWDATSGGYSGAT 125 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 + + + + ++ Y A S + N+ +++NG+ V+ HL+S Sbjct: 126 PEDGGVLLLSRWPILRKEQYVFKDACGSDRWS-NKGFAYAEIDVNGQLTHVVGTHLQS-- 182 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 + + ++Q + ++ ++ + + P V+AGD N + Sbjct: 183 --TDPGCASGQAADVRARQLRAVRAFLDAKRIPAGEPVVLAGDLNIDSHGGEYPALLANG 240 Query: 228 IDPNDSLIRFPKEKDSRCNA----NKNLR-NKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + + + K +DY + + + + ++ Sbjct: 241 GLAPATARTGWANSFDPADNSIAAYRYPGEPKEDLDYVLYRADHARPQQYANTVHRFHSA 300 Query: 283 DDIKSRGKR------LSDHCPISI 300 S LSDH P+ Sbjct: 301 PWTVSSWGTSYTYTDLSDHYPLLA 324 >gi|282855240|ref|ZP_06264572.1| exodeoxyribonuclease III [Propionibacterium acnes J139] gi|282581828|gb|EFB87213.1| exodeoxyribonuclease III [Propionibacterium acnes J139] gi|314924052|gb|EFS87883.1| exodeoxyribonuclease III [Propionibacterium acnes HL001PA1] gi|314965024|gb|EFT09123.1| exodeoxyribonuclease III [Propionibacterium acnes HL082PA2] gi|314983099|gb|EFT27191.1| exodeoxyribonuclease III [Propionibacterium acnes HL110PA3] gi|315090643|gb|EFT62619.1| exodeoxyribonuclease III [Propionibacterium acnes HL110PA4] gi|315093843|gb|EFT65819.1| exodeoxyribonuclease III [Propionibacterium acnes HL060PA1] gi|327326466|gb|EGE68255.1| exodeoxyribonuclease III [Propionibacterium acnes HL103PA1] Length = 297 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 43/320 (13%), Positives = 77/320 (24%), Gaps = 64/320 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ S+NIN + ++ + D D++ LQE+ A + Sbjct: 1 MRIASFNINGIRAALKRGF---------------SEWMEARDCDVIGLQEVRCRPA--DL 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSR--- 139 S + TA A VR ++ + Sbjct: 44 PEGAFGDRHVSWAPGSLAGRNGVALLTRTAPAEVRSWGTHLVMTPGQAPTPAQVLTGNTN 103 Query: 140 -------AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + V++ + V ++L D + Sbjct: 104 GLPTELLPFADEGRYIEVDLADTPLTVACLYLPKGATPDPANEKAIAKQDRKMAFLAGFR 163 Query: 193 DWI----TQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPND 232 D + + F++ GDFN F + P+ Sbjct: 164 DHLVRRRQECTAQGRHFLVMGDFNIAHENADLKNWKANQHNEGFLPEERQWFDTILSPDT 223 Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + IDY + I D Sbjct: 224 LIDVVRAQHPDTNGPYSWWSWRGKAFVNDAGWRIDYHLASPELASKAITSEI-------D 276 Query: 284 DIKSRGKRLSDHCPISIDYD 303 S +R SDH + IDYD Sbjct: 277 RDPSYSERTSDHAAVVIDYD 296 >gi|291546831|emb|CBL19939.1| exodeoxyribonuclease III [Ruminococcus sp. SR1/5] Length = 251 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 78/306 (25%), Gaps = 82/306 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N + + LDADI LQE K+ Sbjct: 1 MKFISWNVNGIRACITKGFEER---------------FHELDADIFCLQETKCQQGQVKL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S R Sbjct: 46 -ELPGYHQYWNYANRRGYSGTAIFTK-----------------------------REPLS 75 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--S 201 A + +E + K+ V+ + + F+ L + +W +D++ + Sbjct: 76 AAYGIGIEEHDKEGRVITLEFDEYYFVTVYTPNSQSELRRLEYRMKWEEDFLAYLLKLQE 135 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P + GD N + + + F + Sbjct: 136 KKPVICCGDLNVAHQEIDLKNPKTNRKNAGFTDEERACFTRALESGFIDTFRYFYPDKEG 195 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDYF++ + + L SDHCP Sbjct: 196 VYSWWSYRFRAREKNAGWRIDYFLVSPSLKEKLQDAKIH-----------GEIMGSDHCP 244 Query: 298 ISIDYD 303 + +D D Sbjct: 245 VELDID 250 >gi|166367334|ref|YP_001659607.1| hypothetical protein MAE_45930 [Microcystis aeruginosa NIES-843] gi|166089707|dbj|BAG04415.1| hypothetical protein MAE_45930 [Microcystis aeruginosa NIES-843] Length = 260 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 38/286 (13%), Positives = 77/286 (26%), Gaps = 34/286 (11%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+ +S+NI W + + DI+ QE + + Sbjct: 2 KLTAMSFNIRYDKPDPDEGNW-------RVRREAVAALIAHYSPDIIGTQEARANQLLDL 54 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA-KDSFSRAG 141 + S R + + + + + L ++ ++G+ +++ Sbjct: 55 HRLLPKYQSLGSDRRRTGLDEHCAILYQPSRLKCLEIYEFWLSETPDVIGSITEAWGNPY 114 Query: 142 NRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + G+ + + HL + D ++ + Q KD++ Sbjct: 115 PRMVTGAKFRTLEGQTLQFYNTHLDYYS--DQAKDLGAKCIQERFCQLDLTKDYL----- 167 Query: 201 SLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 + GDFN L I D+L + N + I Sbjct: 168 -----FLTGDFNVNSQQLPRQILTQPLQPEIKLKDALADLELAEQMSFNNYTDTPYLA-I 221 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D D D + SDH P+ + Sbjct: 222 DTIYYDSRL---------QLDWAKVDPSRWLNLIPSDHYPVIAAFT 258 >gi|13471939|ref|NP_103506.1| exonuclease [Mesorhizobium loti MAFF303099] gi|14022683|dbj|BAB49292.1| probable exonuclease [Mesorhizobium loti MAFF303099] Length = 256 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 33/302 (10%), Positives = 82/302 (27%), Gaps = 70/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L ++NIN ++ L + D+V LQE+ + + Sbjct: 1 MKLATFNINNINS----------------RLENLLAWLAAAKPDVVCLQELKARD----- 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ + + P+L +R Sbjct: 40 -----MQFPRTALADAGYGAVWKGEPTWNGVAILAR------GAEPVLTRDALPGDDADR 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++G I + ++ + + Y + L+ Q ++ + Sbjct: 89 QSRYIEAAVDG--IVIACLYAPNGNPQPGPKFQYKLAWHAR------LEAHAAQLLDTGL 140 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGD+N + + + K Sbjct: 141 PVVLAGDYNIVPEPRDIYATRSYDDNALVQPESRAAFAALIEQGWVDALRKIYPKETLYT 200 Query: 249 KNLRNKIP--------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +D+ ++ + + L D SDH P+ + Sbjct: 201 FWDYRRNRWPRDAGLRLDHILLSKTLARRLKGAGI-------DRDVRGEDGASDHAPVWV 253 Query: 301 DY 302 + Sbjct: 254 EL 255 >gi|326330755|ref|ZP_08197057.1| endonuclease/exonuclease/phosphatase family protein [Nocardioidaceae bacterium Broad-1] gi|325951438|gb|EGD43476.1| endonuclease/exonuclease/phosphatase family protein [Nocardioidaceae bacterium Broad-1] Length = 332 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 36/284 (12%), Positives = 79/284 (27%), Gaps = 59/284 (20%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 +V +K+ ++++NI G + + AD+V LQE+ Sbjct: 100 AVPRKLTVMTFNIKGGRVSPGE-------------LDGIAGVIRGSGADVVLLQEVDRNR 146 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + + + + + + A+ + + L + Sbjct: 147 RRSGNVDQPAIIASHLGMQAVFGANDYITDRGGYGNAILSRFPIAESGNTHLPNSDG--- 203 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R + + + G+++ V + HL S SL Q + + Sbjct: 204 -KEQRGVLRANIIVEGQRLVVFNTHLDHT------------SDSLRQAQIGAVMSRVNAY 250 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + ++ GD N D+ + + +D Sbjct: 251 DGAK---LLGGDLNAGSGSGVLGTALASL-------------TDAGASLGASHDGGGRVD 294 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 Y + +L + LSDH +SID+ Sbjct: 295 YLL----PNSWLEAGAGRVTPT----------GLSDHHAVSIDF 324 >gi|319948313|ref|ZP_08022460.1| exodeoxyribonuclease III [Dietzia cinnamea P4] gi|319438033|gb|EFV93006.1| exodeoxyribonuclease III [Dietzia cinnamea P4] Length = 266 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 70/305 (22%), Gaps = 64/305 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N + + + D D++ +QE + Sbjct: 1 MRLATWNVN----------------SIRARKDRVLAWLDRSDVDVLAMQETKCKDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + +AV + + ++ Sbjct: 41 ------QFPEEDFRELGYEVAHHGLSQWNGVAVASRVGLEDVRLGFDGMPGFHKDPEQSQ 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS--CSLLSQQAQWLKDWITQKKES 201 + + V +++ + L TY L A L + Sbjct: 95 DPEARAISAVCDGVRVYSLYVPNGRELSDPHYTYKLEWLARLRDHAAAEL------VADP 148 Query: 202 LVPFVIAGDFNRKINYLGNNDD--------------FWKTIDPNDSLIRFPKEKDSRCNA 247 + GD+N D +E Sbjct: 149 DAQVALVGDWNVAPLDEDVWDMEVFEGKTHVSGPERLAVAAFDGAGFREVTREYTPGPGV 208 Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ + + D + +GK SDH P+ Sbjct: 209 YTYWDYTGLSFPKRKGMRIDFQLHSPALAARVTGAFI-------DREERKGKGASDHAPV 261 Query: 299 SIDYD 303 ++ D Sbjct: 262 VVELD 266 >gi|262041126|ref|ZP_06014344.1| endonuclease/exonuclease/phosphatase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041576|gb|EEW42629.1| endonuclease/exonuclease/phosphatase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 253 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 39/291 (13%), Positives = 80/291 (27%), Gaps = 49/291 (16%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + + +++ N + LR +++ +DIV LQE+ Sbjct: 4 PTAGFSLNVLTINTHKGFTAFNRRF----------ILPELRDAVRSVSSDIVCLQEVMGA 53 Query: 78 NAVAKV----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + V + +P T F + +++ + H AV + Sbjct: 54 HEVHPLHIENWPDTTHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRFPIE-----YYE 108 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 S R + + I + I + D Q L Sbjct: 109 NRDISVGNGEKRGLLYCRIVPPRSGITIHVICVHLGLRADQ-----------RQAQLTML 157 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 +W+ + P V+AGDFN ++ F + + Sbjct: 158 AEWVNT-LPAGEPVVVAGDFNDWRQQANQPLKAQAGLEE-----IFTRARGRPARTFPVS 211 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + + LSDH P+S++ Sbjct: 212 FPLLRLDRIYVKNAHASRPKALALKQ-----------WRHLSDHAPLSVEI 251 >gi|294811940|ref|ZP_06770583.1| Large secreted protein [Streptomyces clavuligerus ATCC 27064] gi|326440328|ref|ZP_08215062.1| large secreted protein [Streptomyces clavuligerus ATCC 27064] gi|294324539|gb|EFG06182.1| Large secreted protein [Streptomyces clavuligerus ATCC 27064] Length = 628 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 36/325 (11%), Positives = 83/325 (25%), Gaps = 66/325 (20%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + ++ + ++N+ L + + + + K + DIV L+E+ Sbjct: 318 PHRSGELAVATYNVENLDPTDPQTKFDSLAKAVVENLA---------SPDIVALEEIQDN 368 Query: 78 NAVAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 N V + S N + +I + Sbjct: 369 NGKKNDGVVAADETVRKFTDAIVAAGGPAYEWRSISPENNKDGGEPGGNIRQVFLFNPER 428 Query: 121 VRVLQQSY----------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 V ++ P + + +R+ + G+ ++ Sbjct: 429 VSFTDRAGGDATTPTDVTSTRRGGAALTLSPGRVDPANPAWESSRKPLAAEFSFRGETVF 488 Query: 159 VLDIHLKSFCFLD----SLENTYSPSCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFN 212 V+ H S + + S QQAQ + ++ + ++ ++ GD N Sbjct: 489 VIANHFGSKGGDEGLTAHRQPPNRSSEVKRLQQAQSVNAFVKKILKADRRADVLVVGDIN 548 Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 D + N +D + + F Sbjct: 549 DFEFSAT----TQALTDGGALYPAVKSLPRKDRYSYVFQGNSQVLDQILTSPSIRNFSYD 604 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCP 297 +++ + SDH P Sbjct: 605 SVHINAEFSDQN--------SDHDP 621 >gi|254391934|ref|ZP_05007127.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|197705614|gb|EDY51426.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] Length = 627 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 36/325 (11%), Positives = 83/325 (25%), Gaps = 66/325 (20%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + ++ + ++N+ L + + + + K + DIV L+E+ Sbjct: 317 PHRSGELAVATYNVENLDPTDPQTKFDSLAKAVVENLA---------SPDIVALEEIQDN 367 Query: 78 NAVAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 N V + S N + +I + Sbjct: 368 NGKKNDGVVAADETVRKFTDAIVAAGGPAYEWRSISPENNKDGGEPGGNIRQVFLFNPER 427 Query: 121 VRVLQQSY----------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 V ++ P + + +R+ + G+ ++ Sbjct: 428 VSFTDRAGGDATTPTDVTSTRRGGAALTLSPGRVDPANPAWESSRKPLAAEFSFRGETVF 487 Query: 159 VLDIHLKSFCFLD----SLENTYSPSCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFN 212 V+ H S + + S QQAQ + ++ + ++ ++ GD N Sbjct: 488 VIANHFGSKGGDEGLTAHRQPPNRSSEVKRLQQAQSVNAFVKKILKADRRADVLVVGDIN 547 Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 D + N +D + + F Sbjct: 548 DFEFSAT----TQALTDGGALYPAVKSLPRKDRYSYVFQGNSQVLDQILTSPSIRNFSYD 603 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCP 297 +++ + SDH P Sbjct: 604 SVHINAEFSDQN--------SDHDP 620 >gi|260061504|ref|YP_003194584.1| hypothetical protein RB2501_07885 [Robiginitalea biformata HTCC2501] gi|88785636|gb|EAR16805.1| hypothetical protein RB2501_07885 [Robiginitalea biformata HTCC2501] Length = 387 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 35/318 (11%), Positives = 80/318 (25%), Gaps = 49/318 (15%) Query: 25 RLVSWNINTLSEQEGV-----------SLWKNSVKRTTSDYTLLRQYAKNLD-------A 66 L +N+ L + + + +R + ++ Sbjct: 58 TLAFYNVENLFDTRDDSLTADDSRTPEGEDRWTEERYRVKLRRIAGVLSDIGRETAMRSP 117 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK-KNVRVLQ 125 D++ L E+ + + + + + H I A +K + Sbjct: 118 DLIGLCEVENRAVLEDLLG---QEALRTKGYGVVHYDSPDRRGIDVAFLYKKACFTPIES 174 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 S LL R R + + ++G+ +++ H S + Y + + L Sbjct: 175 ASRRLLLYDTRNRRRFTRDQLLVYGVLDGEPVYLSVNHWPSRSGGVAATEAYRRAAASL- 233 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW-----KTIDPNDSLIRFPKE 240 Q L + + FV GD+N ++ + Sbjct: 234 -QRDILDSVLR--LDPNARFVSMGDYNDDPTDASIRFTLGSGSSRDSLASREFFNPMEPL 290 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLI------------------QESFSEILYNE 282 + + D + + N ++ + + Sbjct: 291 FLAGSGSLAYGDRWNLFDQLMFNGNWFRDTTGYRFWKARVFRPDYLLTSSGPYKGYPFRT 350 Query: 283 DDIKSRGKRLSDHCPISI 300 S SDH P+ Sbjct: 351 YAGGSYQGGYSDHLPVYA 368 >gi|110640994|ref|YP_668722.1| hypothetical protein ECP_0804 [Escherichia coli 536] gi|191174511|ref|ZP_03036010.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli F11] gi|300992083|ref|ZP_07179785.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 200-1] gi|110342586|gb|ABG68823.1| hypothetical protein YbhP [Escherichia coli 536] gi|190905224|gb|EDV64864.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli F11] gi|300305412|gb|EFJ59932.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 200-1] gi|324011114|gb|EGB80333.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 60-1] Length = 253 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 82/288 (28%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ NI+ LR + + ADIV LQE+ + V Sbjct: 9 SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P + F + + + + + H AV + S Sbjct: 59 LHVENWPDTSHYEFLADTMWSDFAYGRNAVYLEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A R + + GK I V+ +HL + Q L +W Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + P ++AGDFN + +D F + Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + LSDH P+S + Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251 >gi|319404823|emb|CBI78424.1| exodeoxyribonuclease III [Bartonella rochalimae ATCC BAA-1498] Length = 272 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 83/305 (27%), Gaps = 68/305 (22%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + +WNIN + + QY D++ LQE+ +FP Sbjct: 5 IATWNIN----------------SIRLRLSQVLQYLDIFSVDMLCLQEIKCP---DDLFP 45 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + S + +A+ + + + +D Sbjct: 46 RQFFEAAGYQH------IALSGQKSYHGVAIISRLPFISVERCFFCQKEDCRH------- 92 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + +++E++G+KI + + ++ + D + + + + I + + Sbjct: 93 LSVVIELHGRKIRIHNFYVPAG--GDEPDVNKNEKFRHKLDFLEEMSS-IRADQGDGLES 149 Query: 206 VIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNANK 249 ++ GD N + ++ K + + + Sbjct: 150 LLLGDLNIAPLPEDVWSHKQLLKVVSHTPIETERLQALCCEGGWVDLMRMKFPIPTKLYT 209 Query: 250 NLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +D+ N F + SDH P+ Sbjct: 210 WWSYRARDWALSDRGRRLDHIWSSPNLVPF-------VKELAIFRDTRGWPQPSDHVPVQ 262 Query: 300 IDYDF 304 +DF Sbjct: 263 TLFDF 267 >gi|167762826|ref|ZP_02434953.1| hypothetical protein BACSTE_01184 [Bacteroides stercoris ATCC 43183] gi|167699166|gb|EDS15745.1| hypothetical protein BACSTE_01184 [Bacteroides stercoris ATCC 43183] Length = 266 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 79/304 (25%), Gaps = 73/304 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++++++N+N L L ++ D++ LQE Sbjct: 12 EMKIITYNVNGLRAAVSKGLP---------------EWLAKEQPDVLCLQETK------- 49 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + H + ++ +A+ K Y G + Sbjct: 50 -LQPEQYPAEALDALGYRHYLHSARKKGYSGVAILTKREP----DYVEYGMGMEEYDSEG 104 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R V + + V+ ++ S D + + A L + Sbjct: 105 RF-----VRADYGDLSVVSVYHPSGTSGDERQAFKMEWLEHFRRYAVELLR-------TR 152 Query: 203 VPFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GD+N + +D W T N+ I + Sbjct: 153 PKLVLCGDYNICHEAIDIHDPVRNATNSGFLPEEREWMTRFLNEGFIDTFRLLHPDSREY 212 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDY + + L + + SDHCP+ Sbjct: 213 TWWSYRFNSRAKNKGWRIDYCMASEAVRPMLKEARILNDAVH-----------SDHCPMM 261 Query: 300 IDYD 303 ++ Sbjct: 262 LELT 265 >gi|209548989|ref|YP_002280906.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534745|gb|ACI54680.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 263 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 84/303 (27%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N ++ +L ++ K D+V LQE+ + +A Sbjct: 1 MKIATYNVNGING----------------RLAILLRWLKEDAPDVVCLQELKTDDA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +A+ K+ + L G D +R Sbjct: 41 ------GFPRKEIERSGYGAVWHGQRSWNGVAILAKDKTPILTRRGLPGDPDDSH---SR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ I + ++L + + Y + + L D+ + V Sbjct: 92 YIEAVI-----DGIVIGCLYLPNGNPFPGAKFDYK------LRWFRRLHDYAAELLALEV 140 Query: 204 PFVIAGDFNRKINY---LGNNDDFWKTIDPND-----------SLIRFPKEKDSRCNANK 249 P ++AGDFN + + + Sbjct: 141 PSILAGDFNVMPTEIDVYKPERWLDDALFRPEVRKAYAHLVGQGWTDAVRHLHPHERIYT 200 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+F++ +L + + SDH P+ I Sbjct: 201 FWKYWRNSFERDAGLRIDHFLLSPAVAPWLRSATVR-------RKPRGWEHTSDHAPVMI 253 Query: 301 DYD 303 + D Sbjct: 254 ELD 256 >gi|27806969|ref|NP_776959.1| deoxyribonuclease-1 precursor [Bos taurus] gi|6015029|sp|P00639|DNAS1_BOVIN RecName: Full=Deoxyribonuclease-1; AltName: Full=Deoxyribonuclease I; Short=DNase I; Flags: Precursor gi|2546888|emb|CAA04819.1| pancreatic deoxyribonuclease I [Bos taurus] gi|148745517|gb|AAI42350.1| Deoxyribonuclease I [Bos taurus] gi|296473424|gb|DAA15539.1| deoxyribonuclease-1 precursor [Bos taurus] Length = 282 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 39/284 (13%), Positives = 90/284 (31%), Gaps = 30/284 (10%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA--K 82 ++ ++NI T E + + + + + DIV +QE+ + VA K Sbjct: 24 KIAAFNIRTFGET---------KMSNATLASYIVRIVRRY--DIVLIQEVRDSHLVAVGK 72 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + +++ ++ R V VL G + + + + Sbjct: 73 LLDYLNQDDPNTYHYVVSEPLGRNSYKERYLFLFRPNKVSVLDTYQYDDGCESCGNDSFS 132 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + K+ I D++ S L Q +W + Sbjct: 133 REPAVVKFSSHSTKVKEFAIVALHSAPSDAVAEINSLYDVYLDVQQKWHLN--------- 183 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 ++ GDFN +Y+ ++ + + + + + N D V+ Sbjct: 184 -DVMLMGDFNADCSYVTSSQWSSIRLRTSSTFQWLIPDSADTTATSTNCAY----DRIVV 238 Query: 263 DQNAYKF-LIQESFSEILYNEDDIKSR--GKRLSDHCPISIDYD 303 + + ++ S + + S +SDH P+ + Sbjct: 239 AGSLLQSSVVPGSAAPFDFQAAYGLSNEMALAISDHYPVEVTLT 282 >gi|329956608|ref|ZP_08297181.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides clarus YIT 12056] gi|328523980|gb|EGF51056.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides clarus YIT 12056] Length = 374 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 91/312 (29%), Gaps = 64/312 (20%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 + ++ +S+NI + + Y K +ADI+ L Sbjct: 98 LNFHTANPPEESIKFLSYNIMGFNGAVKKDGKNP-----------ILTYLKESNADILCL 146 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 QE S + ++ K+ S S + IA K + + Sbjct: 147 QEYASDESPRRLTQKDI-ERELKDYPYHRISVVGSGSGYTNKIACYSKFPILSARVLNYP 205 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS------------- 178 + +V +++N I +++ HL+S + ++ Y Sbjct: 206 SGYN--------GSVLYELKLNEDTITLINNHLESNKLTKADKDIYEDILKAPEKEKVKS 257 Query: 179 ----------PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 + ++ + QA + I + ++ GDFN + + + Sbjct: 258 GARLLVHKLAEASAIRAPQADTIAREIASSRYPS--VIVCGDFNDTPISYA-HRVIAQNL 314 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D F + + + ID ++ +N + + R Sbjct: 315 DD-----AFTQSGRGLGISYNQNKFYFRIDNILISKNLQSY-------------NCTVDR 356 Query: 289 GKRLSDHCPISI 300 + SDH PI Sbjct: 357 SIKESDHYPIWC 368 >gi|327287974|ref|XP_003228703.1| PREDICTED: deoxyribonuclease-1-like 2-like [Anolis carolinensis] Length = 277 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 102/304 (33%), Gaps = 41/304 (13%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 L L+ F + A +R+ ++NI + ++ ++ + Sbjct: 4 LLLLVFGLVSLAQTVSPLRICAFNIQSFG---------DTKLSDEGTSKIIVKVLSRY-- 52 Query: 67 DIVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 DI +QE+ + AV ++ + E I+ S N R +V V+ Sbjct: 53 DIALVQEVRDSDLSAVNELMERLNRASKEPYEFEISQSLGRENYKEMYLFIYRTSSVSVV 112 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLV---EINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 Q S S A +R L E NGK++ ++ +H + + + Sbjct: 113 DQ-----YQFPSKSNAFSRAPFILKFSASESNGKELILVPLH-------TAPNDAVAEID 160 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 +L + + W + GDFN +Y+G D + ++ ++ Sbjct: 161 ALYDVYLKIIDKW------GTDNMMFLGDFNADCSYVGKKDWASIRLRTSEVFKWLIPDE 214 Query: 242 DSRCNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPI 298 + + + D V+ K++ S + E+ + +SDH P+ Sbjct: 215 EDTTVGHSDCAY----DRIVVSGAQMKKWVKPNSAKVFDFQEEFKLSQEKALAVSDHFPV 270 Query: 299 SIDY 302 + Sbjct: 271 EVTL 274 >gi|322834267|ref|YP_004214294.1| Endonuclease/exonuclease/phosphatase [Rahnella sp. Y9602] gi|321169468|gb|ADW75167.1| Endonuclease/exonuclease/phosphatase [Rahnella sp. Y9602] Length = 253 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 81/288 (28%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++++ N + LR + + ADIV LQE+ + V Sbjct: 9 SLKVLTINTHKGFTAFNKRF----------ILPELRDAVRTVGADIVCLQEVTGAHDVHS 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P F + + + + + H AV + S Sbjct: 59 LHVESWPDTPHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + + NR + + G + V+ +HL + Q + L DW Sbjct: 114 VAGSENRGLLYCRIVPPQLGSPVHVICVHLGLR-------------EAHRQAQLKMLADW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + P ++AGDFN +D F + K Sbjct: 161 VNAF-PQGEPVLVAGDFNDWRQKANRPLKVQAGLDE-----IFTRAKGRPARTFPVRMPL 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + LSDH P+S + Sbjct: 215 LRLDRIYVKNANAS-----------APAVLPLRNWRHLSDHAPLSAEI 251 >gi|229493724|ref|ZP_04387508.1| exodeoxyribonuclease III [Rhodococcus erythropolis SK121] gi|229319393|gb|EEN85230.1| exodeoxyribonuclease III [Rhodococcus erythropolis SK121] Length = 266 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 33/307 (10%), Positives = 71/307 (23%), Gaps = 70/307 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + + D D++ +QE + Sbjct: 1 MRIATWNVN----------------SVRARTDRIIDWLGRSDVDVLAMQETKCKDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR--VLQQSYPLLGAKDSFSRAG 141 Y + I + +A+ + V G Sbjct: 41 ------QFPYERFKEIGYEVAHVGLSQWNGVAIASRVGLDDVQIGFEDQPGFDKDPEADP 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--K 199 R A + G + V +++ + L+ Y L+D + Sbjct: 95 VREARAIGATCGG--VRVWSLYVPNGRELEDPHYAYKLD------WLAKLRDDAEGWLKQ 146 Query: 200 ESLVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSR 244 + + GD+N + + Sbjct: 147 DPDAQIALVGDWNVAPTDDDVWDPAFFEGKTHTSEPERAAFTAFTESGFADVVRPYTPGP 206 Query: 245 CNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 ID+ + + D + +GK SDH Sbjct: 207 -GVYTYWDYTQLRFPKKQGMRIDFILGSPAFAARVEAAEI-------DRNERKGKGASDH 258 Query: 296 CPISIDY 302 P+ ++ Sbjct: 259 APVIVNL 265 >gi|33594836|ref|NP_882479.1| putative endonuclease/exonuclease/phosphatase family protein [Bordetella parapertussis 12822] gi|33599108|ref|NP_886668.1| putative endonuclease/exonuclease/phosphatase family protein [Bordetella bronchiseptica RB50] gi|33564912|emb|CAE39857.1| putative endonuclease/exonuclease/phosphatase family protein [Bordetella parapertussis] gi|33575154|emb|CAE30617.1| putative endonuclease/exonuclease/phosphatase family protein [Bordetella bronchiseptica RB50] Length = 286 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 86/322 (26%), Gaps = 83/322 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+VS+NI+ S LR L D+VFLQE+ N V+ V Sbjct: 4 IRVVSYNIH----------KGRSALGRRESLNDLRLGLYGLRPDLVFLQEVQGRNEVSSV 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + A+ + + + S R R Sbjct: 54 LHAQHESLAAALRLQAAYGRNAIRTGTDHGNALLSRFDILDHE-----NQDISDHRLEQR 108 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +++ G ++ +HL F +Q Q L D I Q Sbjct: 109 GLLHARIDVGGTEVHCFVVHLGLFAGS-------------RGRQIQALTDRIRQSVPDGA 155 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-------------------- 243 P +IAGDFN + L F + + + P+ Sbjct: 156 PLLIAGDFNDWGDRLAP--MFVQQLGLYEVFSHAPRSHGGDLPRLRDSVRRLGNVLRGVP 213 Query: 244 ----------------------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + +D + S + Sbjct: 214 NSVAVLERNNQLGMGGAYCPLPPPRTFPAVFPWFRLDRIY-----QRGFAVRSARVLR-- 266 Query: 282 EDDIKSRGKRLSDHCPISIDYD 303 RLSDH P+ + + Sbjct: 267 ----GREWARLSDHSPLLAELE 284 >gi|319943026|ref|ZP_08017309.1| exodeoxyribonuclease III [Lautropia mirabilis ATCC 51599] gi|319743568|gb|EFV95972.1| exodeoxyribonuclease III [Lautropia mirabilis ATCC 51599] Length = 268 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 80/301 (26%), Gaps = 66/301 (21%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L +WN+N+L + + D + LQE FP Sbjct: 3 LATWNVNSL----------------KMRLQHVLDWLAANPVDFLCLQE---TKLTDDKFP 43 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 K+ + + + +A+ + + + RR Sbjct: 44 KDE-------IEAAGYGVIFTGQPTYNGVALLYRKE--AGYVPDGVQLNNPLYEDVQRRL 94 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLV 203 V + + V+ + + + S + Y L++WI Q ++E Sbjct: 95 VSARFQTAAGPVRVIGAYFPNGQAVGSEKYVYK------LGWIASLQEWIAQLRREEPDT 148 Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249 ++AGDFN +D L + + Sbjct: 149 GVILAGDFNIAPADADVHDPAVWADGILVSGPEREALQGLLALGLHDAFRLFEQPPKLFS 208 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID ++ + + D + ++ SDH P+ + Sbjct: 209 WWDYRALGFRRNAGLRIDLILVSDELKPMVGRCWI-------DKGPRKLEKPSDHTPVVV 261 Query: 301 D 301 + Sbjct: 262 E 262 >gi|163869207|ref|YP_001610459.1| exodeoxyribonuclease III [Bartonella tribocorum CIP 105476] gi|161018906|emb|CAK02464.1| exodeoxyribonuclease III [Bartonella tribocorum CIP 105476] Length = 271 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 86/307 (28%), Gaps = 68/307 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 R+ +WNIN + +Y + AD++ LQE +A+ Sbjct: 3 FRIATWNIN----------------SIRLRLAQVFRYLELFPADVLCLQETKCPDAL--- 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + E S + +A+ + +D Sbjct: 44 ------FPVEAFEAAGYKHIALSGQKSYNGVAIVSRLPFKKVNKRFFCQNQDCRY----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++VEI+G+ + + + ++ + D + + + + +I +E + Sbjct: 93 --ISVIVEIHGRSLRIHNFYVPAG--GDIPDAEVNEKFRHKLDFLEEMS-FIRADQEKGI 147 Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247 ++ GD N + ++ K + + Sbjct: 148 SSLLLGDLNIAPLAEDVWSHQQLLKVVSHTPIETERLQGLCCQGGWIDLMRLHIPVPTKL 207 Query: 248 NKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + FL+ S +R SDH P Sbjct: 208 YTWWSYRARDWALTDYGRRLDHVWSSPDLASFLVDLS-------TFRDARGWERPSDHIP 260 Query: 298 ISIDYDF 304 + ++F Sbjct: 261 VQTVFNF 267 >gi|42520813|ref|NP_966728.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410553|gb|AAS14662.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Drosophila melanogaster] Length = 259 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 84/305 (27%), Gaps = 72/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N L + + DIV LQE+ Sbjct: 2 LKIATWNVN----------------SIRKRVNQLCSFIVDSQIDIVLLQEIKCTEE---- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y+ + + + V K + + ++ + Sbjct: 42 ------QFPYAEIEKLGYEYAIYGQVARNGVCVLSKYPILEKFKIDIVESHQEARY---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E +++ KI V +++ + DS + + L + ++ ++ Sbjct: 92 --IECVIKYTNSKIRVGSVYVPNGQSPDSH------AFEYKLKFFDNLYERMSTLLKNEE 143 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP----------------NDSLIRFPKEKDSRCNA 247 +IAGD+N + + D ++ N + Sbjct: 144 LTIIAGDYNIAPDEIDVFD--SNLLNGQVCFHIREREKLRAILNLGFKDAFRISHPNLQQ 201 Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY ++ A L DD + + SDH P+ Sbjct: 202 FTWWHYQGNSLRNNQGMRIDYMLLSPQAVDKLETCYI-------DDRLRKLENPSDHTPV 254 Query: 299 SIDYD 303 + Sbjct: 255 VCAIE 259 >gi|33591896|ref|NP_879540.1| putative endonuclease/exonuclease/phosphatase family protein [Bordetella pertussis Tohama I] gi|33571540|emb|CAE41020.1| putative endonuclease/exonuclease/phosphatase family protein [Bordetella pertussis Tohama I] gi|332381313|gb|AEE66160.1| putative endonuclease/exonuclease/phosphatase family protein [Bordetella pertussis CS] Length = 286 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 85/322 (26%), Gaps = 83/322 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+VS+NI+ S LR L D+VFLQE+ N V+ V Sbjct: 4 IRVVSYNIH----------KGRSALGRRESLNDLRLGLYGLRPDLVFLQEVQGRNEVSSV 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + A+ + + + S R R Sbjct: 54 LHAQHESLAAALRLQAAYGRNAIRTGTDHGNALLSRFDILDHE-----NQDISDHRLEQR 108 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +++ G ++ +HL F +Q Q L D I Q Sbjct: 109 GLLHARIDVGGTEVHCFVVHLGLFAGS-------------RGRQIQALTDRIRQSVPDGA 155 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-------------------- 243 P +I GDFN + L F + + + P+ Sbjct: 156 PLLIVGDFNDWGDRLAP--MFVQQLGLYEVFSHAPRSHGGDLPRLRDSVRRLGNVLRGVP 213 Query: 244 ----------------------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + +D + S + Sbjct: 214 NSVAVLERNNQLGMGGAYCPLPPPRTFPAVFPWFRLDRIY-----QRGFAVRSARVLR-- 266 Query: 282 EDDIKSRGKRLSDHCPISIDYD 303 RLSDH P+ + + Sbjct: 267 ----GREWARLSDHSPLLAELE 284 >gi|323358932|ref|YP_004225328.1| extracellular nuclease [Microbacterium testaceum StLB037] gi|323275303|dbj|BAJ75448.1| predicted extracellular nuclease [Microbacterium testaceum StLB037] Length = 1293 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 41/343 (11%), Positives = 86/343 (25%), Gaps = 64/343 (18%) Query: 17 TASVAQKVRLVSWNINTLSEQEG------------------VSLWKNSVKRT-------T 51 A V V+L S+N+ + R Sbjct: 272 PADVGGTVQLASFNVLNYFTTTAEDVGCDSVYTDREGNPVTANRCPEPGPRGAANDENLQ 331 Query: 52 SDYTLLRQYAKNLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHSK 103 + ++A++V L+E+ + A++ + + + Sbjct: 332 RQQAKIVAALNAMEAEVVSLEEIENSAALGKPRDEALSTLVDALNADLGEDAWAFVPSPT 391 Query: 104 --RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 S + I TA +K V + S L + +R +A + +++ Sbjct: 392 ALPASEDVIRTAFIYKKAAVSPIGASVILDDPAFANARQPLAQAFAPAGSDEAAFVAIVN 451 Query: 162 IH-----LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRK 214 D+ +QA+ L + ++ + + GDFN Sbjct: 452 HFKSKSDSDPAAEGDNAAGDQGAFNGDRVRQAEALVAFAGERAKTVDGGAVFLLGDFNAY 511 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 + + D+ +D+ + A + + Sbjct: 512 AQEDPI-----QVLRDAGYADL---GADTGTYTYSFSGQSGSLDHVLASPAARELVTGTD 563 Query: 275 FSEILYNEDDIKSRG--------------KRLSDHCPISIDYD 303 I E R SDH P+ + D Sbjct: 564 IWNINAGEALALEYSRYNANVRSFYDASPYRSSDHDPVVVGLD 606 >gi|228995361|ref|ZP_04155046.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM 12442] gi|228764403|gb|EEM13266.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM 12442] Length = 354 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 109/318 (34%), Gaps = 64/318 (20%) Query: 21 AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++ + ++NI G +S ++T + + + + + D+D + +Q Sbjct: 54 GEEFKATTFNIGYGGLDKDQDFFLDGGTGSRSSSKEQTEKNISNMLSFLQKEDSDFILVQ 113 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-------------KK 119 EM + + F N + F + + + N + ++ K Sbjct: 114 EMDEKSL--RSFDVNQYKAFQDGLKDHASTFGYNFNAQWVPVPIKKPHGYTNSGLGSFSK 171 Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENT 176 Y L G + + R VE V + NGK + ++++HL ++ + Sbjct: 172 YKVEEVTRYQLPGREMWLRQLFELDRAIVEQKVPVDNGKYLRMVNVHLSAYDKGGN---- 227 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + QQ ++LK+++ + ++ V+ GD+N+ ++ + D +K P + Sbjct: 228 ------IRKQQVEFLKEYMNKHYKNGDYLVLGGDWNQLLSDVQLKDPKFKEEWPEWLVQL 281 Query: 237 FPKEKDSRCNANKNL----------------RNKIPIDYFVMDQNAYKFLIQESFSEILY 280 D + ID F++ N ++ ++ + Sbjct: 282 PEDFTDGGFQWAVDDTVWTVRDNVKSYVEDENFVTIIDGFLVSPN--VEIVSVQGHDLKF 339 Query: 281 NEDDIKSRGKRLSDHCPI 298 SDH P+ Sbjct: 340 EN----------SDHNPV 347 >gi|217977845|ref|YP_002361992.1| exodeoxyribonuclease III [Methylocella silvestris BL2] gi|217503221|gb|ACK50630.1| exodeoxyribonuclease III [Methylocella silvestris BL2] Length = 258 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 79/301 (26%), Gaps = 70/301 (23%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + +WN+N L +Y K D++ LQE+ + Sbjct: 3 IATWNVN----------------SVRQRTGHLLRYLKEQAPDVLCLQELKCVDEA----- 41 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + ++ +A+ K +++ P + Sbjct: 42 -----FPWGEVEAAGYNAAVHGQKGFNGVAILSKAPIEVKRGLPGDPTDEHARY------ 90 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 +E ++ + V I+L + D+ + Y + L + P Sbjct: 91 IEAVIPHKQSVVRVASIYLPNGNPPDTEKYGYKLA------WMDRLIAHARELLRLEEPL 144 Query: 206 VIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 V+AGD+N ++T+ + Sbjct: 145 VLAGDYNVIPAAADCADPAAWVGDALFLPQTRARFRTLLNLGLTDAL-RATTDEAGLYTF 203 Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + ID+ ++ A L+ + D + SDH P+ I+ Sbjct: 204 WDYQAGAWQRNKGIRIDHLLLSPGAADRLVTTTI-------DKGLRAEDKPSDHVPVRIE 256 Query: 302 Y 302 Sbjct: 257 L 257 >gi|313794091|gb|EFS42113.1| exodeoxyribonuclease III [Propionibacterium acnes HL110PA1] gi|315077107|gb|EFT49182.1| exodeoxyribonuclease III [Propionibacterium acnes HL053PA2] gi|327451399|gb|EGE98053.1| exodeoxyribonuclease III [Propionibacterium acnes HL092PA1] Length = 297 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 82/320 (25%), Gaps = 64/320 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ S+NIN + L + +R + D D++ LQE+ A + Sbjct: 1 MRIASFNINGIRA----VLKRGFSERMEAR-----------DCDVIGLQEVRCRPA--DL 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA---VRKKNVRVLQQSYPLLGAKDSFSRA 140 S + TA A ++ + P + + Sbjct: 44 PEGAFGDRHVSWAPGSLAGRNGVALLTRTAPAEVRSWGTHLVMAPGQAPTPAQALTGNTD 103 Query: 141 GNRRAV--------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 G + + V++ + V ++L D + Sbjct: 104 GLPTELLPFADEGRYIEVDLADTPLTVACLYLPKGATPDPANEKTIAKQDRKMAFLTGFR 163 Query: 193 DWI----TQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPND 232 D + + F++ GDFN F + P+ Sbjct: 164 DHLVRRRQECTTQGRHFLVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDT 223 Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + IDY + I D Sbjct: 224 LIDVVRAQHPDTNGPYSWWSWRGKAFVNDAGWRIDYHLASPELASKAITAEI-------D 276 Query: 284 DIKSRGKRLSDHCPISIDYD 303 S +R SDH + +DYD Sbjct: 277 RDPSYSERTSDHAAVVVDYD 296 >gi|298373415|ref|ZP_06983404.1| extracellular ribonuclease/nuclease fusion protein [Bacteroidetes oral taxon 274 str. F0058] gi|298274467|gb|EFI16019.1| extracellular ribonuclease/nuclease fusion protein [Bacteroidetes oral taxon 274 str. F0058] Length = 554 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 91/304 (29%), Gaps = 31/304 (10%) Query: 19 SVAQKVRLVSWNINT-LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS- 76 + + +++ S+N+ L+ G + + + +DADI L E+ Sbjct: 177 ANSHNLKVCSFNLEYYLTSNFGTGFGPANEVEAAKQHAKTVKALVAIDADIYGLIEIQQG 236 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 +A+ K+ + I+ + R V P + Sbjct: 237 QDAIRKLCNALNANKGSNVYSFIDDGGSVYGSYTKVGFIFRSDRVI------PDGNLYNV 290 Query: 137 FSRAGNRR-AVELLVEINGKKIWVLDIHLKSFCF-----LDSLENTYSPSCS-LLSQQAQ 189 + +R+ + N +K+ H KS ++ + + + ++A Sbjct: 291 NNVLPHRKKIQCFRLLSNNEKLVFSLNHFKSKTGKNATGDNADQKDGQGAFNGDRVREAN 350 Query: 190 WLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + I + +I GD N + N + K K+ + Sbjct: 351 AVLSAIAPYSVNCGDEDVLIMGDLNSYAKEDPLY------VFYNKGYVNLLKSKNDSAYS 404 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG--------KRLSDHCPIS 299 +D+ V + + + ++ I +E + R SDH + Sbjct: 405 YVYSGLSGCLDHAVANASMRRQIVDARVFHINADEPKMFEYHQSTSVGDMYRSSDHDAVV 464 Query: 300 IDYD 303 + D Sbjct: 465 VALD 468 >gi|297570792|ref|YP_003696566.1| exodeoxyribonuclease III Xth [Arcanobacterium haemolyticum DSM 20595] gi|296931139|gb|ADH91947.1| exodeoxyribonuclease III Xth [Arcanobacterium haemolyticum DSM 20595] Length = 269 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 33/308 (10%), Positives = 75/308 (24%), Gaps = 67/308 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + + D D + LQE+ Sbjct: 1 MKIATWNIN----------------SARARADRILDVLTRHDLDALALQEIKCK------ 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP-----LLGAKDSFS 138 + + + +A+ + + + + Sbjct: 39 ----PEQFPAADIEAAGYEVAAHGLNQWNGVAIISRVGLEDVRREFPGQPGFVKGEPEGG 94 Query: 139 RAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R+ E + I + +++ + Y L+D+ Sbjct: 95 RSFIPGPAEARAIGARVGGIDLWSLYVPNGRATGDPHYHYKLEFLRR------LRDFAEG 148 Query: 198 KKESLVP--FVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKE 240 + + GD+N + + + Sbjct: 149 QMRDDDAAQLALVGDWNVIPTDADVWDPAAMEDGIYLTEPERAAFHAFADAGMVELSRQY 208 Query: 241 -KDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + LR + IDY I + D + +GK SDH Sbjct: 209 ATNYTFWDYQKLRFPKNEGMRIDYVYASPALAARSIDGTI-------DRDERKGKGASDH 261 Query: 296 CPISIDYD 303 P+ I+++ Sbjct: 262 VPVIIEFE 269 >gi|312884747|ref|ZP_07744448.1| hypothetical protein VIBC2010_19580 [Vibrio caribbenthicus ATCC BAA-2122] gi|309367660|gb|EFP95211.1| hypothetical protein VIBC2010_19580 [Vibrio caribbenthicus ATCC BAA-2122] Length = 861 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 42/373 (11%), Positives = 93/373 (24%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G + R + + + LDADIV L E Sbjct: 466 GNLRVATFNVLNYFNSPYGGDQNLDGSNRGAKSFEEFERQQTKIVEALYKLDADIVGLME 525 Query: 74 MGSY------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT---AIAVRK 118 + + + + + + + + R Sbjct: 526 IENNGFGNNGAIAQLVDQLNDRVGFEQYTYVALDTNQDGLTNEEDFVGTDVITNGLIYRP 585 Query: 119 KNVRVLQQS------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 + +L Y G + + R A+ +++ +++ + HLKS Sbjct: 586 RIAELLSSKVIALPSQLAPPVYDEKGKQIEDGKNYQRNAIASTFKVHDEELTIAVNHLKS 645 Query: 167 --------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL---------- 202 ++ + A L + + + Sbjct: 646 KGSTCWEDAASAEQGGQGREDKDKQGSCENFRVAAAVALGEALESIEGHKIIVGDLNAYG 705 Query: 203 --VPFVIAGDFN---------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 P + D N I+ D I + + + Sbjct: 706 MEDPVRVLTDLNGGSVKAARNTYIDGEPQFGDEGAVITKSYGYLNAVAINHQNSWSYSYN 765 Query: 252 RNKIPIDYFVMDQNAYK--------FLIQESFSEILYNEDDIKSR-------------GK 290 +D+ +M + YK + + I E + Sbjct: 766 DEVGALDHILMSPSLYKKEGFLQQRRFVDATDWHINGGESKLFDYTDKFKGDLPKYNDHF 825 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 826 RASDHDPAVLELN 838 >gi|289625360|ref|ZP_06458314.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647509|ref|ZP_06478852.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. aesculi str. 2250] gi|330867768|gb|EGH02477.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330875589|gb|EGH09738.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. glycinea str. race 4] gi|331011241|gb|EGH91297.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 261 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 40/295 (13%), Positives = 83/295 (28%), Gaps = 51/295 (17%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 S + + +++ N++ LR+ + + ADIVFLQE+ Sbjct: 11 ATPVSASVSLNVLTMNMHMGFGIFNRRF----------ILPELREAVRTVSADIVFLQEV 60 Query: 75 --GSYNAVAKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + V T + S + + D A+ K + ++ Sbjct: 61 HGEHQSHARSVKDWPTISQYEFLADSMWNDFAYGRNAVYPDGDHGNALLSKYPIIQHENL 120 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + S R + ++E+ V + + S QQ Sbjct: 121 DI-----SIHGTEQRGLLHCILEVPYAG-RVHAVCVHLGLR-----------ESHRRQQL 163 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 L + + + P ++AGDFN ++ F + + + Sbjct: 164 NLLAELMER-LPEGEPVIVAGDFNDWRQRAD------ALLEGTGLHEVFVERFGAPAKSF 216 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +D + S LSDH P++++ Sbjct: 217 PARWPLLRLDRIYVRNATSHRPKVLS-----------SRPWSHLSDHAPLAVELT 260 >gi|240850841|ref|YP_002972241.1| exodeoxyribonuclease III [Bartonella grahamii as4aup] gi|240267964|gb|ACS51552.1| exodeoxyribonuclease III [Bartonella grahamii as4aup] Length = 260 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 85/302 (28%), Gaps = 66/302 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNI + + L Q+ + DIV LQE+ S + Sbjct: 1 MKIATWNIAG----------------IKARHETLCQWLQQSQPDIVCLQEIKSIDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ K D +R Sbjct: 41 ------NFPRDAIENLGYHIETHGQKSFNGVAILSKKTPDEVIRRLPGNDNDEQTRY--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + N + V ++L + ++S + +Y + L Sbjct: 92 --IEAVYSTNKGVVRVASLYLPNGNPIESEKYSYKIE------WMERLYTHAKSLLAYEE 143 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++AGD+N L ++ I D+ + Sbjct: 144 PLILAGDYNVIPAPLDAKKPQEWYQDALFLQETRKVFQRILNLGLYDAIRNVTDTPSFSF 203 Query: 249 KNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + N I ID+ ++ A L I + ++ SDH P+ I Sbjct: 204 WDFQAGAWPKNNGIRIDHLLLSPEAVDQL-------ICAHSQTEVRGYQKPSDHVPVWIH 256 Query: 302 YD 303 + Sbjct: 257 LN 258 >gi|239917012|ref|YP_002956570.1| exodeoxyribonuclease III [Micrococcus luteus NCTC 2665] gi|239838219|gb|ACS30016.1| exodeoxyribonuclease III [Micrococcus luteus NCTC 2665] Length = 308 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 39/315 (12%), Positives = 81/315 (25%), Gaps = 59/315 (18%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 VR+ + N+N + +R++ D++ LQE+ Sbjct: 28 AGAPKADGAVRVATVNVNGIRAS---------------HRKGMREWFAGRGVDVLTLQEV 72 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 A A V + I ++ + + +A+ + ++ + Sbjct: 73 ---RAPADVTAQLVSEIVGEDWDEVHLADAVAAAKGRAGVAIASRFPLGEVRTG--IADA 127 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D + R L +G + V+ ++ S + + Sbjct: 128 DGYFDDAGRWIEADLRLPDGSPLTVVSAYVHSGEVDTPKQVDKYR-------FLDEMVRR 180 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 +++ ++ GD N L + F + Sbjct: 181 LSELAAGEGHALVTGDLNVGHTELDIKNWKGNVKKAGFLPEERAYFDRFFGELGFTDVHR 240 Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + IDY + + + D S G Sbjct: 241 ALAGPVPGPYTWWSMRGKAFDNDAGWRIDYHMATADLAERAT-------TAVVDRAPSWG 293 Query: 290 KRLSDHCPISIDYDF 304 R SDH P+ +DY F Sbjct: 294 TRFSDHAPLVVDYQF 308 >gi|319406308|emb|CBI79945.1| exodeoxyribonuclease III [Bartonella sp. AR 15-3] Length = 272 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 35/307 (11%), Positives = 84/307 (27%), Gaps = 68/307 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 R+ +WNIN + + QY D++ LQE+ + Sbjct: 3 FRIATWNIN----------------SIRLRLSQVLQYLDIFSVDMLCLQEIKCP---DDL 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + S + +A+ + V + +D Sbjct: 44 FPRQFFEAAGYQH------IALSGQKSYHGVAIISRLPFVSIERRFFCQKEDCRH----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +++E++G++I + + ++ + D + + + + I + + Sbjct: 93 --LSVIIELHGRRIRIHNFYVPAG--GDEPDVNKNEKFRYKLDFLEEMSS-IRSDQGDGL 147 Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247 ++ GD N + ++ K + + + Sbjct: 148 ASLLLGDLNIAPLPEDVWSHKQLLKVVSHTPIETERLQALCCEGGWVDLMRMKFPIPTKL 207 Query: 248 NKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ N F + SDH P Sbjct: 208 YTWWSYRARDWALADRGRRLDHIWSSPNLVPF-------VKELAIFREARGWPQASDHVP 260 Query: 298 ISIDYDF 304 + +DF Sbjct: 261 VQTLFDF 267 >gi|296137256|ref|YP_003644498.1| Endonuclease/exonuclease/phosphatase [Thiomonas intermedia K12] gi|295797378|gb|ADG32168.1| Endonuclease/exonuclease/phosphatase [Thiomonas intermedia K12] Length = 278 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 44/290 (15%), Positives = 87/290 (30%), Gaps = 48/290 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAV 80 ++R+ S+NI+ + L+ + L D+VFLQE+ Sbjct: 2 ELRVASYNIH--------KGVLGHGPAKRASILELQTALQGLQPDLVFLQEVQFLHQRNA 53 Query: 81 AKV--FPKNTWCIFYSTERLINHSKRDSN--NDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 ++ +P F + ++ + R + A+ + + + S Sbjct: 54 RRLSGWPALPQHDFLAQALSMHAAYRTNACTRHGEHGNALLSRYPIIDIAHCDV-----S 108 Query: 137 FSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R R + + V + G + + +H F + +Q L D+I Sbjct: 109 DHRFEQRGLLHVQVALPKGGPLHCIVVHFGLF-------------AASRQRQTDRLLDYI 155 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS---RCNANKNLR 252 + + ++AGDFN +G + + K S R Sbjct: 156 AARVPAQAALIVAGDFNDWHGRIGP-QLLQQGLVDVSEPPLKTNGKTSWRKRVRTYPARL 214 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +P+D + + RLSDH P+ Sbjct: 215 PLMPLDRIYARAFSASEIGLGW-----------GRAWARLSDHAPLLASL 253 >gi|328702292|ref|XP_001952290.2| PREDICTED: recombination repair protein 1-like [Acyrthosiphon pisum] Length = 317 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 ++++SWN+ L + +Y K D DI+ LQE+ + + Sbjct: 64 LKIISWNVAGLRAWLKKD---------------VVEYLKKEDPDIICLQEIKCTEKQMPD 108 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + I+ ++ + ++ +A+ K + + + D Sbjct: 109 EAKLPGYKIYINS----------GDKAGYSGVALYSKTKPISVRMGKEIKDLDDNEGR-- 156 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 ++E ++ +++ ++ + + + L ++ Sbjct: 157 ------VIEAEYEQFFLVSTYIPNAGAGLKTLPKRMKWDEAFRKYLKEL--------DTK 202 Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P V+ GD N D + + F + A Sbjct: 203 KPVVLTGDLNVAHEEIDIANPKTNTKSAGFTKEERDNMSLLLEQGFVDTFRTLNPEKTGA 262 Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +DYF+ + + + + SDHCPI Sbjct: 263 YTFWTYFHNSRAKNVGWRLDYFITSKRFMDNVCDSTIRNEVL-----------GSDHCPI 311 Query: 299 SIDYD 303 + Sbjct: 312 VFYIN 316 >gi|326384218|ref|ZP_08205900.1| exodeoxyribonuclease III Xth [Gordonia neofelifaecis NRRL B-59395] gi|326197083|gb|EGD54275.1| exodeoxyribonuclease III Xth [Gordonia neofelifaecis NRRL B-59395] Length = 294 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 39/306 (12%), Positives = 79/306 (25%), Gaps = 71/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N L + + D+V LQE KV Sbjct: 1 MRLATWNVN----------------SVKQRVPRLLPWLDDRQPDVVCLQE-------TKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY--PLLGAKDSFSRAG 141 + + + +A+ + + G D+ Sbjct: 38 SDEAFAAELGDELAARGYEFAHAGQGQWNGVALLSRVGLDDVRVAFPDAPGFPDTTGEPE 97 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + V +++ + +DS Y WL+ + Sbjct: 98 GRAVSAVC-----DGVRVYSVYVPNGREVDSDHYNYK---------LNWLEKLRLAVEPD 143 Query: 202 LVPFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 VI GD+N + ++ + L ++ Sbjct: 144 ADTTVICGDYNIIPTDADCFDPEAFVGHTHVTPAEREAFEALKALG-LHDVMRDHWPDKQ 202 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + ID+ + + + D +G + SDH P Sbjct: 203 IYTYWDYRAGMFHKDLGMRIDFLLAGGSVAERAKASWV-------DRQARKGTKPSDHAP 255 Query: 298 ISIDYD 303 + +D D Sbjct: 256 VFLDLD 261 >gi|254428681|ref|ZP_05042388.1| exodeoxyribonuclease III [Alcanivorax sp. DG881] gi|196194850|gb|EDX89809.1| exodeoxyribonuclease III [Alcanivorax sp. DG881] Length = 271 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 34/314 (10%), Positives = 81/314 (25%), Gaps = 78/314 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 + L+S+NIN + L+ ++ LQE + Sbjct: 1 MTLISFNING----------------IRARLHQLQTVIDKYQPALIGLQETKVHDPEFPE 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + H +A+ + Q +D+ Sbjct: 45 QAVRDMGYHPY------------FFGQKGHYGVALITREPLESVQYGFPTDEEDA----- 87 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 RR + ++ + + + + F + + + L+ ++ + Sbjct: 88 QRRMIIGTLKHSDGSLITVL----NGYFPQGENREHPTKFPAKKKFYEDLQHYLINHHQP 143 Query: 202 LVPFVIAGDFNRK---------------------INYLGNNDDFWKTIDPNDSLIRFPKE 240 + GDFN ++L ++W+ + + + Sbjct: 144 SDQVAVMGDFNISSTDLDIGIGEANRKRWLREGKTSFLPEEREWWERLVGWGLTDTYRHQ 203 Query: 241 KDSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 S + + ID + Q L D Sbjct: 204 NPSTDDVFSWFDYRSKGFDREPRRGLRIDTVLATQPLMAKLDTTGV-------DYDMRGM 256 Query: 290 KRLSDHCPISIDYD 303 ++ SDHCP+ ++ Sbjct: 257 EKPSDHCPVWARFN 270 >gi|291486726|dbj|BAI87801.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp. natto BEST195] Length = 252 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 85/304 (27%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L R Y K DADI+ LQE + + Sbjct: 1 MKLISWNVNGL--------------RAVMRKMDFLSYLKEEDADIICLQETKIQDGQVDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ + ++++ + ++ AV K + L D R Sbjct: 47 QPE-GYHVYWN----------YAVKKGYSGTAVFSKQEPLQVIYGIGLEEHDQEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++V+ ++ + + L L Sbjct: 92 -----VITLEFENVFVITVYTPNSRRGLERIDYRMQWEEALLSYILELDQ--------KK 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + F A Sbjct: 139 PVILCGDLNVAHQEIDLKNPKANRNNAGFSDQEREAFTRFLEAGFVDSFRHVYPDLEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + + + S S SDHCP+ Sbjct: 199 SWWSYRAGARDRNIGWRIDYFVVSERLKEQIEDASI-----------SADVMGSDHCPVE 247 Query: 300 IDYD 303 + + Sbjct: 248 LIIN 251 >gi|254469348|ref|ZP_05082753.1| endonuclease/exonuclease/phosphatase family protein [Pseudovibrio sp. JE062] gi|211961183|gb|EEA96378.1| endonuclease/exonuclease/phosphatase family protein [Pseudovibrio sp. JE062] Length = 362 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 44/372 (11%), Positives = 95/372 (25%), Gaps = 85/372 (22%) Query: 2 IRKYVLALVFFLVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSV------------ 47 ++ +L + A+ AQ V +VS+N+ L + Sbjct: 1 MKSLLLGATILGLATPAAYAQDKPVTVVSYNVQNLFDTIDDENNPQDDTYLSKEEKEARG 60 Query: 48 ----------------------------KRTTSDYTLLRQYAKN--LDADIVFLQEMGSY 77 + + L + ++ DI+ L E + Sbjct: 61 KEHEEACESYNEKGSHYYKQCIELNWGEESYSKKLMTLGEVIRSFPETPDILVLPETENK 120 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV-RVLQQSYPLLGAKDS 136 + + K + Y + ++ S + N I I R + G +++ Sbjct: 121 QVLDDLVNKALSGLDYKSVVQLDTSNNEHNRGIDVGIISRLPLKGEPETITVFGEGDENT 180 Query: 137 FSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R V+ E +G+ ++V +H S + + L Sbjct: 181 HDCKPTRDIVKAEFEMPDGESMYVFGVHFPSG-----------AAYQCRKDAMEVLNKE- 228 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE---KDSRCNANKNLR 252 K V AGDFN + ++ + P+ + Sbjct: 229 RAKLPEDANVVAAGDFNFNCT--DVQNGEFQALAREGHWSYPPEIVGCAAPGSAFYYRDQ 286 Query: 253 NKIPIDYFVMDQNAYKFLIQES----------------------FSEILYNEDDIKSRGK 290 + +D ++ S + + + Sbjct: 287 SWSFLDMILVSSALRPDQDSNSTWFADLGSFHTVVTHPSQYAQDARNKVRPKRFDADNNQ 346 Query: 291 RLSDHCPISIDY 302 SDH P+ + + Sbjct: 347 GASDHWPVLMRF 358 >gi|148554832|ref|YP_001262414.1| endonuclease/exonuclease/phosphatase [Sphingomonas wittichii RW1] gi|148500022|gb|ABQ68276.1| Endonuclease/exonuclease/phosphatase [Sphingomonas wittichii RW1] Length = 230 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 41/281 (14%), Positives = 77/281 (27%), Gaps = 53/281 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + S+NI K + + ADIV LQE + Sbjct: 2 ITVASYNIR-----------KGLGTDRRRRPDRILDVLHEIHADIVALQEADRRFGARQS 50 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + AI VR + L R Sbjct: 51 ALPAELISQGEYKAVPFDIRPGGIGWHGNAILVRHSVEIGDYEPIRLPTL-------EPR 103 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 AV + + G + V+ +HL S +Q + +++ + Sbjct: 104 GAVMAELRVGGNDLRVVGMHLDL-------------SGLWRRRQVRA-IIDHIRRRRHRM 149 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 P V+ GD N + G +F + + + + R +D ++ Sbjct: 150 PTVLMGDLNEWSLHGGCIREFAPEL-----------QIAPTGRSYHSRRPVGCLDRIILT 198 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + L+ R + SDH PI ++ Sbjct: 199 PDL--HLVACGVHV--------SERARLASDHLPIWARVNW 229 >gi|56696006|ref|YP_166360.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria pomeroyi DSS-3] gi|56677743|gb|AAV94409.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria pomeroyi DSS-3] Length = 337 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 95/337 (28%), Gaps = 58/337 (17%) Query: 24 VRLVSWNINTLSE----QEGVSLWKNSVKRTT----SDYTLLRQYAKNLDADIVFLQEMG 75 +RL +WNI + + + + R + + LDAD V + E Sbjct: 1 MRLATWNIEWFANLFDRNDRLLVDDRWSGRHDVTRAQQVEAIAKVLTALDADAVLIVEAP 60 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + R N+ H +A+ R+ + PL Sbjct: 61 NTGRTQNTVRALGAFAEAFDLRTHAAVMGF-ANETHQELALLYDPARLEARHDPLGEETG 119 Query: 136 SFSRA-----------------------GNRRAVELLVE-INGKKIWVLDIHLKSFCFLD 171 A ++ +EL V G + ++ HLKS Sbjct: 120 KRGSATPPRFDGTYRIDLDIDATEDLVRFSKPPLELEVTTATGTRFRMIGAHLKSKAPHG 179 Query: 172 SLENTYSPSCSLLSQ-----QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 + + S+L++ QA WL++ + V+ GD N F + Sbjct: 180 AGSRDEAIRISILNRRKQLAQAIWLRERVEDHLTRGDEVVLLGDLNDGPGLDEFEHLFGR 239 Query: 227 ---TIDPNDSLIRFPKEKDSRCNANKNL------------RNKIPIDYFVMDQNAYKFLI 271 I L +K + +DY ++ + Sbjct: 240 SSVEILLEAGLYDPHADKARQVRPGPLPATARFQLPGEGRYLSALLDYVMISKGLMARRP 299 Query: 272 QESFSEILYNED-----DIKSRGKRLSDHCPISIDYD 303 + + +++ SDH P+++D D Sbjct: 300 AWRIWHPFDDAECWQMVELREALLTASDHFPVTLDID 336 >gi|319956480|ref|YP_004167743.1| endonuclease/exonuclease/phosphatase [Nitratifractor salsuginis DSM 16511] gi|319418884|gb|ADV45994.1| Endonuclease/exonuclease/phosphatase [Nitratifractor salsuginis DSM 16511] Length = 531 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 41/336 (12%), Positives = 87/336 (25%), Gaps = 78/336 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKN---------SVKRTTSDYTLLRQYAKNLDADIVFL 71 ++ +++ SWN+ L + S Q +LDAD++ L Sbjct: 19 SRTIKIASWNVENLFDMHYQGTEYEEYVPGRHGWSEAMLRKKLEHTAQVICDLDADVIGL 78 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 QE+ + ++++ + + A+ + + P+ Sbjct: 79 QEIENDEVLSRL------QRLLKRVGCPYPYRAVTGGRAPVHTALLSRIPLAKVRDLPVT 132 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 R +E + ++ S + + S A+ L Sbjct: 133 RYG------RQRPILEATLRLD-----------PSLKIFVNHWRSKRGPESERILYAKAL 175 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGN----------------------------NDD 223 + + + S +++ GDFN D Sbjct: 176 RKRLMKLPPSTE-YLLLGDFNSDWEEFRIIDPKLNDTGGITGINQVMATTRDGRMVRYRD 234 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS------- 276 + + S+ ++ NK ID ++ + E Sbjct: 235 LKRGQREFLHYNLWLDLPASQRWSHNFYGNKEAIDAMLIPPSLADGRRWEYVRGSFGVYR 294 Query: 277 ----------EILYNEDDIKSRGKRLSDHCPISIDY 302 + + K GK SDH PI + Sbjct: 295 PSYLFGIHGEILRWGYRHGKHTGKGFSDHLPIYARF 330 >gi|298488865|ref|ZP_07006890.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156618|gb|EFH97713.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 363 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 45/325 (13%), Positives = 97/325 (29%), Gaps = 68/325 (20%) Query: 21 AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 Q +++++WNI L+ + + + + + + + ++ DIV Sbjct: 52 GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLSYNLDEVARVIRDEQPDIVL 111 Query: 71 LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 LQ + VA ++P +T ++ +E + N S A Sbjct: 112 LQGVDDGAKNSDYEDQLALIKERVADLYPCSTQAFYWKSEFVPNPHIWGS-VGRKLATLS 170 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174 R + P+ A + + A+ + +G K+ V++ L + Sbjct: 171 RFHIDSAERVQLPVPDANIISRQFQPKDALLVSYLPLRDGGKLAVINTSLTTARHTGD-- 228 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI------ 228 +Q + + + + P++I GDFN + + Sbjct: 229 --------TAQKQIVATEKQLDKLESGGTPWLIGGDFNLLPLGQYQRLPEEQRLGYAADS 280 Query: 229 ---DPNDSLIRFPKEKDS----RCNANKNLRNKIPI-------DYFVMDQNAYKFLIQES 274 + + P +S R + N I DY + + S Sbjct: 281 ELHELWEKYPMIPDNAESSGIDRGKWLTHFPNDSRINGPDRTVDYLFYSPSLKR----VS 336 Query: 275 FSEILYNEDDIKSRGKRLSDHCPIS 299 + +SDH P+ Sbjct: 337 ARV-------RRDDTLLISDHLPVI 354 >gi|16081140|ref|NP_391968.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp. subtilis str. 168] gi|221312070|ref|ZP_03593917.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp. subtilis str. 168] gi|221316395|ref|ZP_03598200.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221321308|ref|ZP_03602602.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp. subtilis str. JH642] gi|221325591|ref|ZP_03606885.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp. subtilis str. SMY] gi|585113|sp|P37454|EXOA_BACSU RecName: Full=Exodeoxyribonuclease gi|467372|dbj|BAA05218.1| 3'-exo-deoxyribonuclease [Bacillus subtilis] gi|2636635|emb|CAB16125.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp. subtilis str. 168] Length = 252 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 87/304 (28%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L R Y K DADI+ LQE + + Sbjct: 1 MKLISWNVNGL--------------RAVMRKMDFLSYLKEEDADIICLQETKIQDGQVDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P++ + ++++ + ++ AV K + + D R Sbjct: 47 QPED-YHVYWN----------YAVKKGYSGTAVFSKQEPLQVIYGIGVEEHDQEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++V+ ++ + + L L Sbjct: 92 -----VITLEFENVFVMTVYTPNSRRGLERIDYRMQWEEALLSYILELDQ--------KK 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + F A Sbjct: 139 PVILCGDLNVAHQEIDLKNPKANRNNAGFSDQEREAFTRFLEAGFVDSFRHVYPDLEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ ++ + + S S SDHCP+ Sbjct: 199 SWWSYRAGARDRNIGWRIDYFVVSESLKEQIEDASI-----------SADVMGSDHCPVE 247 Query: 300 IDYD 303 + + Sbjct: 248 LIIN 251 >gi|16126254|ref|NP_420818.1| exodeoxyribonuclease III [Caulobacter crescentus CB15] gi|221235027|ref|YP_002517463.1| exodeoxyribonuclease III [Caulobacter crescentus NA1000] gi|13423482|gb|AAK23986.1| exodeoxyribonuclease III [Caulobacter crescentus CB15] gi|220964199|gb|ACL95555.1| exodeoxyribonuclease III [Caulobacter crescentus NA1000] Length = 262 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 34/299 (11%), Positives = 85/299 (28%), Gaps = 65/299 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+++ + + + ++ D+ LQE+ + Sbjct: 1 MRIATWNVNSIN----------------ARLEGVLAWFESEAPDVAVLQEIKCVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + +A+ K+ + ++D Sbjct: 41 ------KFPTEAFERLGYNVAVHGQKTYNGVALLSKHPIEDVRKGLPFLSEDEVD--EQA 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R +E ++ V+ I+L + + + + Y S + L Sbjct: 93 RYIEAVIAAP-TPFRVVGIYLPNGNPIGTEKFAYKLS------WMRRLHAHAQGLLAFEE 145 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P VIAGD+N + + ++ + + + + Sbjct: 146 PLVIAGDYNVIPEVEDVANPQAWLGDALFQPESRAAFRALKNLGFADAYMQADGAPGGYT 205 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ID+ ++ A L + ++ SDH P+ Sbjct: 206 FWDYQAGAWQRNLGIRIDHLLLSPQAADRLTG-------LVIHRDERDKEKPSDHVPVV 257 >gi|110834346|ref|YP_693205.1| exodeoxyribonuclease III [Alcanivorax borkumensis SK2] gi|110647457|emb|CAL16933.1| exodeoxyribonuclease III [Alcanivorax borkumensis SK2] Length = 271 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 34/314 (10%), Positives = 81/314 (25%), Gaps = 78/314 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 + L+S+NIN + L+ ++ LQE + + Sbjct: 1 MTLISFNING----------------IRARLHQLQAVIDKYQPALIGLQETKVHDPDFPE 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + H +A+ + Q +D+ Sbjct: 45 QAVRDMGYHPY------------YFGQKGHYGVALITREPLESVQYGFPTDDEDA----- 87 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 RR + ++ N + + + F + + + L+ ++ + Sbjct: 88 QRRMIIGTLKHNDGSLITVL----NGYFPQGENRDHPLKFPAKKKFYEDLQHYLITHHQP 143 Query: 202 LVPFVIAGDFNRK---------------------INYLGNNDDFWKTIDPNDSLIRFPKE 240 + GDFN ++L ++W + F + Sbjct: 144 SDQVAVMGDFNISSTDLDIGIGEPNRKRWLREGKTSFLPEEREWWDRLVGWGLTDTFRHQ 203 Query: 241 KDSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + + ID + + L D Sbjct: 204 NPTTDDVFSWFDYRSKGFDREPRRGLRIDTVLATEPLMAKLDTTGV-------DYQMRAM 256 Query: 290 KRLSDHCPISIDYD 303 ++ SDHCP+ ++ Sbjct: 257 EKPSDHCPVWARFN 270 >gi|23502852|ref|NP_698979.1| exodeoxyribonuclease III [Brucella suis 1330] gi|254700641|ref|ZP_05162469.1| exodeoxyribonuclease III [Brucella suis bv. 5 str. 513] gi|254708986|ref|ZP_05170797.1| exodeoxyribonuclease III [Brucella pinnipedialis B2/94] gi|254713585|ref|ZP_05175396.1| exodeoxyribonuclease III [Brucella ceti M644/93/1] gi|254716061|ref|ZP_05177872.1| exodeoxyribonuclease III [Brucella ceti M13/05/1] gi|256030513|ref|ZP_05444127.1| exodeoxyribonuclease III [Brucella pinnipedialis M292/94/1] gi|256059974|ref|ZP_05450158.1| exodeoxyribonuclease III [Brucella neotomae 5K33] gi|260169418|ref|ZP_05756229.1| exodeoxyribonuclease III [Brucella sp. F5/99] gi|261217826|ref|ZP_05932107.1| exodeoxyribonuclease III Xth [Brucella ceti M13/05/1] gi|261316482|ref|ZP_05955679.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis B2/94] gi|261321326|ref|ZP_05960523.1| exodeoxyribonuclease III Xth [Brucella ceti M644/93/1] gi|261323946|ref|ZP_05963143.1| exodeoxyribonuclease III Xth [Brucella neotomae 5K33] gi|261751147|ref|ZP_05994856.1| exodeoxyribonuclease III Xth [Brucella suis bv. 5 str. 513] gi|261758940|ref|ZP_06002649.1| exodeoxyribonuclease III [Brucella sp. F5/99] gi|265987555|ref|ZP_06100112.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M292/94/1] gi|23348878|gb|AAN30894.1| exodeoxyribonuclease III [Brucella suis 1330] gi|260922915|gb|EEX89483.1| exodeoxyribonuclease III Xth [Brucella ceti M13/05/1] gi|261294016|gb|EEX97512.1| exodeoxyribonuclease III Xth [Brucella ceti M644/93/1] gi|261295705|gb|EEX99201.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis B2/94] gi|261299926|gb|EEY03423.1| exodeoxyribonuclease III Xth [Brucella neotomae 5K33] gi|261738924|gb|EEY26920.1| exodeoxyribonuclease III [Brucella sp. F5/99] gi|261740900|gb|EEY28826.1| exodeoxyribonuclease III Xth [Brucella suis bv. 5 str. 513] gi|264659752|gb|EEZ30013.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M292/94/1] Length = 268 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 79/306 (25%), Gaps = 68/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +WNIN L+ Q+ ++ D++ LQE + Sbjct: 3 FSIATWNIN----------------SVRLRMPLVEQFLRDYQPDVLCLQETKCP---DDL 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + S + +A + + D Sbjct: 44 FPAKGFRAL------GYEHIAISGQKGYHGVATVSRRPLDGVEKVDFCNMGDCRH----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +VE +K+ + + ++ + D + +P + + ++ I +K+ Sbjct: 93 --LSAVVEAGDRKLRIHNFYVPAG--GDEPDPEINPKFAHKLAFLEEMRAIIADRKD-GC 147 Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247 ++ GD N N + ++ K + + Sbjct: 148 SSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRIKGGWSDLMRHLIAADQKI 207 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + R SDH P Sbjct: 208 YTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG-------LQVLRDARGWDRPSDHVP 260 Query: 298 ISIDYD 303 + +D Sbjct: 261 VIATFD 266 >gi|332868399|ref|ZP_08438130.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter baumannii 6013113] gi|332733398|gb|EGJ64581.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter baumannii 6013113] Length = 812 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 49/325 (15%), Positives = 99/325 (30%), Gaps = 50/325 (15%) Query: 21 AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSY 77 A +R+ S+N+ N + G + + + D + K++DAD+ L E+ + Sbjct: 461 ANHIRVASFNVLNYDNGATGFPTERGANTQAEFDKQHHKIVSALKSIDADVYGLMEIANN 520 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + R N+ I AI K V+ L ++ L Sbjct: 521 GYGPNSAIAHLTSALGPDWKYVIPENLDRLGNDVIAVAIIYNSKRVKPLNKAVVLDLGD- 579 Query: 136 SFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFL-------DSLENTYSP-SCSLLS 185 NR + + K V+ HLKS D+ +N Sbjct: 580 -----KNRTTLAQTFQAVRGNKIFTVIPNHLKSKGCSGVDASSSDADQNDGQGCWNPTRV 634 Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + + W+ + ++ GD N ++ + L + + Sbjct: 635 KAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAPI--LAFEKANYKVLLNDAKVGQGA 692 Query: 244 RCNANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289 + + +D+ + D + Y +++ I +E + Sbjct: 693 QAYSYVFGVASDANGNGGVGNLDHAIADADLYPKVVRTFAWHINADEPMVLDYNEEYKTD 752 Query: 290 -----------KRLSDHCPISIDYD 303 R SDH P+ +D D Sbjct: 753 EQKALFYGEDAYRSSDHDPVIVDLD 777 >gi|313816882|gb|EFS54596.1| exodeoxyribonuclease III [Propionibacterium acnes HL059PA1] gi|315100096|gb|EFT72072.1| exodeoxyribonuclease III [Propionibacterium acnes HL059PA2] Length = 317 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 83/320 (25%), Gaps = 64/320 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ S+NIN + +L + +R + D D++ LQE+ A + Sbjct: 21 MRIASFNINGIRA----ALKRGFSERMEAR-----------DCDVIGLQEVRCRPA--DL 63 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA---VRKKNVRVLQQSYPLLGAKDSFSRA 140 S + TA A ++ + P + + Sbjct: 64 PEGAFGDRHVSWAPGSLAGRNGVALLTRTAPAEVRSWGTHLVMAPGQAPTPAQALTGNTD 123 Query: 141 GNRRAV--------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 G + + V++ + V ++L D + Sbjct: 124 GLPTELLPFADEGRYIEVDLADTPLTVACLYLPKGATPDPANEKTIAKQDRKMAFLTGFR 183 Query: 193 DWI----TQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPND 232 D + + F++ GDFN F + P+ Sbjct: 184 DHLVRRRQECTTQGRHFLVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDT 243 Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + IDY + I D Sbjct: 244 LIDVVRAQHPDTNGPYSWWSWRGKAFVNDAGWRIDYHLASPELASKAITAEI-------D 296 Query: 284 DIKSRGKRLSDHCPISIDYD 303 S +R SDH + +DYD Sbjct: 297 RDPSYSERTSDHAAVVVDYD 316 >gi|160884067|ref|ZP_02065070.1| hypothetical protein BACOVA_02043 [Bacteroides ovatus ATCC 8483] gi|299144720|ref|ZP_07037788.1| putative secreted protein [Bacteroides sp. 3_1_23] gi|156110409|gb|EDO12154.1| hypothetical protein BACOVA_02043 [Bacteroides ovatus ATCC 8483] gi|298515211|gb|EFI39092.1| putative secreted protein [Bacteroides sp. 3_1_23] Length = 260 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 47/288 (16%), Positives = 80/288 (27%), Gaps = 67/288 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 VR++++N+ + L + K+ D V LQE+ S + Sbjct: 24 VRVMTYNLRFG---------------ELASLEELAHHIKSFKPDFVALQEVDSKTDRKRT 68 Query: 84 FPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + Y T + K + + I + K + Q L R Sbjct: 69 PHQKGKDFISELAYHTGMFGLYGKTIDYSTGYYGIGMLSKYPYISVQKIMLPHPVKEHER 128 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R +E L E+ I HL S ++Q +++ Sbjct: 129 ---RAMLEGLFEMGNDTIVFTSTHL------------DVNSQETRAEQIKFITGHFKNY- 172 Query: 200 ESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 P ++ GDFN + F + D + I Sbjct: 173 --KYPVILGGDFNARHYSEAIRGMDSWFAASNDD---------------FGMPAWKPVIK 215 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY +I + L LSDH PI + ++ Sbjct: 216 IDYLFAYPQKGWRVISTQTVQSL------------LSDHLPIITELEY 251 >gi|148360915|ref|YP_001252122.1| endonuclease/exonuclease/phosphatase family transporter protein [Legionella pneumophila str. Corby] gi|296106019|ref|YP_003617719.1| endonuclease/exonuclease/phosphatase family protein [Legionella pneumophila 2300/99 Alcoy] gi|148282688|gb|ABQ56776.1| endonuclease/exonuclease/phosphatase family protein [Legionella pneumophila str. Corby] gi|295647920|gb|ADG23767.1| endonuclease/exonuclease/phosphatase family protein [Legionella pneumophila 2300/99 Alcoy] Length = 251 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 41/287 (14%), Positives = 88/287 (30%), Gaps = 50/287 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAV 80 V L+++NI+ V +R L+ D VFLQE+ Sbjct: 7 SVSLITYNIHKGFGVGAVRFL----------LPEMRDAIAGLNPDFVFLQEVQGKHRKRE 56 Query: 81 AKVFPKN----TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 ++ I + ++K H A+ K +S L Sbjct: 57 KRIVSWPDSPQCEYIAENIWPHYVYAKNAVYQSGHHGNAILSKYPFESFESINLSN---- 112 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 +R + ++++ I +L +HL F + ++Q + L I Sbjct: 113 -MNRASRGILHTQLKLDNNIIHLLCVHLGLFK-------------AERTEQCKALIQRIK 158 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 P ++AGDFN + + + + ++ + + + ++ + Sbjct: 159 DVVPKNEPLIMAGDFNDWRHV--ISKILAENLGIEEAFVALEGQH---ARSFPAIKPALC 213 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D + + + LSDH P+ ++ Sbjct: 214 VDRVYFRGMKVQEVAC-----------LQGKPWRMLSDHLPLYARFE 249 >gi|328709897|ref|XP_003244099.1| PREDICTED: nocturnin-like isoform 2 [Acyrthosiphon pisum] gi|328709899|ref|XP_001951703.2| PREDICTED: nocturnin-like isoform 1 [Acyrthosiphon pisum] Length = 417 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 100/295 (33%), Gaps = 29/295 (9%) Query: 21 AQKVRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 VR++ WN+ L + + + + DI+ LQE+ + Sbjct: 128 GNPVRVLQWNVLSQALGQNNDRFDSCPLEALEWKHRRCHMLEEILKHNPDIICLQEVDHF 187 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKR-DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +++ ++ + + D+N AI + +L++ +L Sbjct: 188 DFLSRALATQSYSGLFVPKPDSPCVYINDNNGPDGCAIFYKNDKFDLLEKHDKVLQVWTV 247 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 S + + L + K++ V HLK+ + +L ++Q + L +I+ Sbjct: 248 HSNQVS-LLLVLKDKSTQKELCVSTTHLKA--------RKGALLSTLRNEQGKDLLQFIS 298 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKI 255 P ++ GDFN + + T+ L K S + + + Sbjct: 299 SHAA-DRPTIVCGDFNAEPTEP-----VYSTMCSCSYLPLDSAYKLSGSEPLYTSWKIRG 352 Query: 256 -------PIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IDY ++ I + EI E+ + S SDH + D+ Sbjct: 353 GEGEVMHTIDYMFYTKHKLTVSNILDMPKEIDIGENRVPSMTY-PSDHFSLISDF 406 >gi|313156920|gb|EFR56358.1| putative lipoprotein [Alistipes sp. HGB5] Length = 673 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 97/341 (28%), Gaps = 68/341 (19%) Query: 1 MIRKYVLALVFFLVPCTASVA-------------------------QKVRLVSWNINTLS 35 M + +LA+ L TA A Q + L S+N+ S Sbjct: 1 MKKTIILAMFAALCTLTAGCADDFKTVLNDKYYEDDTPSREPDITEQTLTLGSYNLWISS 60 Query: 36 EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST 95 + G LW N T+L Q DI QE + ++ Sbjct: 61 KGTGDYLWTN-------RRTVLAQSIVKNKWDIFGFQEA-NGTIQNELPTLVGQQGGKYE 112 Query: 96 ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN------RRAVELL 149 + +D + IA + + + + G R A + Sbjct: 113 WWFVGRDSQDGVSGEALGIAYNPDRFELTDKHFFWISPTPDEMSYGWDELGYHRIAACAM 172 Query: 150 VEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207 V K+ +++ H + ++ A+ L + +P ++ Sbjct: 173 VTDKLYNKQFFMMVTHAPLG-------------ATARAEGAKLLIEREKMYNPDGIPSIL 219 Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSL-IRFPKEKDSRCNANKNL----RNKIPIDYFVM 262 GD N ++ + D ++ F N +K + IDY Sbjct: 220 VGDMNAAMDDASSKTLRTHWNDSFLTVESDFVSGPVGTFNGHKITADLTQATARIDYIYS 279 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + Y D+ SDHCP++I +D Sbjct: 280 RGD---------VELKSYKVDNTVYGNIYPSDHCPLTIQFD 311 >gi|331243524|ref|XP_003334405.1| CCR4-NOT transcription complex [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309313395|gb|EFP89986.1| CCR4-NOT transcription complex [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 786 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 32/314 (10%), Positives = 80/314 (25%), Gaps = 38/314 (12%) Query: 18 ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + + +NI + + L+ Q ADI+ LQE+ Sbjct: 475 SPPPETFTTMCYNILCERYATDRMYGYTPSWALNWEYRKDLILQELMQYGADIICLQEVD 534 Query: 76 SYNAVA---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + + + + + D+ + + + + G Sbjct: 535 VEQYEDFFVQSLKDQGYEGVFYPKSRARTMESHKTEDMFNRVMTKDNIAVIALLEHRQSG 594 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + + V + + + + ++ + S ++ + + + Sbjct: 595 TRQIVAN------VHIHWDPEFRDVKLIQTAMLMDQ--ISEISSRFARLPKRTNLSNNYR 646 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------- 245 + + +P +I GDFN G D + + P+ Sbjct: 647 TAPSYSDGTQIPTIICGDFNSIPQS-GVYDYLSQGLIPSTHPDFCKNNYGPYTQFGIHHS 705 Query: 246 ----------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSR 288 N K IDY ++ + + + Sbjct: 706 LKLKSAYSNLDSKELPFTNYTPGFKGVIDYIWYSTESLQVIGLLGKIDDAYLKKVVGFPN 765 Query: 289 GKRLSDHCPISIDY 302 SDH P+ ++ Sbjct: 766 AHFASDHVPVLAEF 779 >gi|262067405|ref|ZP_06027017.1| exodeoxyribonuclease III [Fusobacterium periodonticum ATCC 33693] gi|291378968|gb|EFE86486.1| exodeoxyribonuclease III [Fusobacterium periodonticum ATCC 33693] Length = 253 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 82/305 (26%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + + Y +ADI LQE +A Sbjct: 1 MKLISWNVNGIRA---------------AIKKGFLDYFNEQNADIFCLQETK-LSAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + G R Sbjct: 45 LELKGYHQYWNYAEKKGY----------SGTAIFTKEEPLSVS----YGLGIEEHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +K +++ ++ + + ++ ++ Sbjct: 91 -----VITLEFEKFYMITVYTPN-------SKDELQRLDYRMVWEDEFRKYLKNLEKKK- 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + + F +A Sbjct: 138 PVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKFTELLESGFTDTFRYFYPDLEHAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ + K+L+ SDHCP+ Sbjct: 198 SWWSYRANARKNNTGWRIDYFIVSKALDKYLVDAEIHAQT-----------EGSDHCPVV 246 Query: 300 IDYDF 304 + DF Sbjct: 247 LFLDF 251 >gi|329940786|ref|ZP_08290066.1| large secreted protein [Streptomyces griseoaurantiacus M045] gi|329300080|gb|EGG43978.1| large secreted protein [Streptomyces griseoaurantiacus M045] Length = 608 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 39/323 (12%), Positives = 84/323 (26%), Gaps = 66/323 (20%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 ++++ + ++N+ L +G + + K+ DIV L+E+ N Sbjct: 300 SSRELAVATYNVENLDPSDGTFAD---------HADAIVHHLKS--PDIVSLEEIQDNNG 348 Query: 80 VAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 V + + + + +I A V Sbjct: 349 ATDDGTVAADRTLGKLIDAVVAAGGPRYEWRGIDPVDGQDGGEPGGNIRQAFLFNPARVS 408 Query: 123 VLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 + P + +R+ + GK ++V+ Sbjct: 409 FTDRPGGTSTTAVGVEKVKGAARLTASPGRIDPADAAWRNSRKPLAGEFVFRGKTVFVIA 468 Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215 H S L Y P S + QA + ++ + + GD N Sbjct: 469 NHFASKGGDQGLTAQYQPPVRSSETQRHAQATEVNAFVKDILEAQRNARVIALGDLNDF- 527 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKE-KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 + ++ +L K S N +D ++ + Sbjct: 528 ----EFSGTARLLEDGGALWSAIKSLPKSERYTYDYQGNSQVLDQILISPSLR-----RP 578 Query: 275 FSEILYNEDDIKSRGKRLSDHCP 297 + + ++SDH P Sbjct: 579 GAYAYDSVHLNAEFPTQISDHDP 601 >gi|306812808|ref|ZP_07447001.1| hypothetical protein ECNC101_12867 [Escherichia coli NC101] gi|305853571|gb|EFM54010.1| hypothetical protein ECNC101_12867 [Escherichia coli NC101] Length = 253 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 82/288 (28%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ NI+ LR + + ADIV LQE+ + V Sbjct: 9 SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P + F + + + + + H AV + S Sbjct: 59 LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A R + + GK I V+ +HL + Q L +W Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAVLAEW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + P ++AGDFN + +D F + Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + LSDH P+S + Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251 >gi|169796594|ref|YP_001714387.1| putative extracellular nuclease [Acinetobacter baumannii AYE] gi|215484055|ref|YP_002326280.1| nuclease [Acinetobacter baumannii AB307-0294] gi|301510758|ref|ZP_07235995.1| nuclease [Acinetobacter baumannii AB058] gi|301595167|ref|ZP_07240175.1| nuclease [Acinetobacter baumannii AB059] gi|332853534|ref|ZP_08434798.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter baumannii 6013150] gi|169149521|emb|CAM87410.1| putative extracellular nuclease [Acinetobacter baumannii AYE] gi|213986940|gb|ACJ57239.1| nuclease [Acinetobacter baumannii AB307-0294] gi|332728567|gb|EGJ59939.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter baumannii 6013150] Length = 812 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 49/325 (15%), Positives = 99/325 (30%), Gaps = 50/325 (15%) Query: 21 AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSY 77 A +R+ S+N+ N + G + + + D + K++DAD+ L E+ + Sbjct: 461 ANHIRVASFNVLNYDNGATGFPTERGANTQAEFDKQHHKIVSALKSIDADVYGLMEIANN 520 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + R N+ I AI K V+ L ++ L Sbjct: 521 GYGPNSAIAHLTSALGPDWKYVIPENLDRLGNDVIAVAIIYNSKRVKPLNKAVVLDLGD- 579 Query: 136 SFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFL-------DSLENTYSP-SCSLLS 185 NR + + K V+ HLKS D+ +N Sbjct: 580 -----KNRTTLAQTFQAVRGNKIFTVIPNHLKSKGCSGVDASSSDADQNDGQGCWNPTRV 634 Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + + W+ + ++ GD N ++ + L + + Sbjct: 635 KAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAPI--LAFEKANYKVLLNDAKVGQGA 692 Query: 244 RCNANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289 + + +D+ + D + Y +++ I +E + Sbjct: 693 QAYSYVFGVASDANGNGGVGNLDHAIADADLYPKVVRTFAWHINADEPMVLDYNEEYKTD 752 Query: 290 -----------KRLSDHCPISIDYD 303 R SDH P+ +D D Sbjct: 753 EQKALFYGEDAYRSSDHDPVIVDLD 777 >gi|241204226|ref|YP_002975322.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858116|gb|ACS55783.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 264 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 74/303 (24%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N ++ +L ++ K D+V LQE+ + +A Sbjct: 1 MKIATYNVNGING----------------RLDILLRWLKEDVPDVVCLQELKTDDA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +A+ K + L G D +R Sbjct: 41 ------GFPRKEIERAGYGAIWHGQRSWNGVAILAKGKTPILTRRGLPGDPDDTH---SR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + F + L A L + V Sbjct: 92 YIEAAV----DGILVGCLYLPNGNPFPGAKFEYKLRWFRRLQDYAAELLEL-------GV 140 Query: 204 PFVIAGDFNRKINY---LGNNDDFWKTIDPND-----------SLIRFPKEKDSRCNANK 249 P ++AGDFN + + + Sbjct: 141 PSILAGDFNVMPTEIDVYKPERWLDDALFRPEVRKAYAHLVAQGWTDAVRHLHPEERIYT 200 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 R ID+F++ L + + SDH P+ I Sbjct: 201 FWRYWRNSFERDAGLRIDHFLLSPAVAPLLRWATVR-------KKPRGWEHTSDHAPVMI 253 Query: 301 DYD 303 + D Sbjct: 254 ELD 256 >gi|83309117|ref|YP_419381.1| exonuclease III [Magnetospirillum magneticum AMB-1] gi|82943958|dbj|BAE48822.1| Exonuclease III [Magnetospirillum magneticum AMB-1] Length = 263 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 77/306 (25%), Gaps = 70/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RLV+WNIN LLRQ A ++ DI+ LQE+ + + + Sbjct: 1 MRLVTWNIN----------------SIRLRIDLLRQVASVMNPDIICLQEIKVDDPLFPL 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ + + G D R Sbjct: 45 DACREMGFGHVA---------FHGMKGYNGVAILSRLPIAEARPLSRCGRDD-------R 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + +E V L D + + + + + W + Sbjct: 89 RHLMARLENG-----VEVHCLYIPAGGDIPDPETNDKFAHKLDFVREITAWAAAEFTPDS 143 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++AGDFN + + + Sbjct: 144 RAILAGDFNIAPLEADVWSHKQLLKVVSHTPVEVELLNAFQASVPFVDAMRHFVPPEEKL 203 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + L ++ SDH P Sbjct: 204 FTWWSYRSPDWQKNDRGRRLDHVWVTPALVPSLRG-------MLVAREARSWEQPSDHVP 256 Query: 298 ISIDYD 303 + +D+D Sbjct: 257 VMVDFD 262 >gi|68476691|ref|XP_717638.1| potential mRNA deadenylase and CCR4-NOT complex subunit Ccr4p [Candida albicans SC5314] gi|68476838|ref|XP_717564.1| potential mRNA deadenylase and CCR4-NOT complex subunit Ccr4p [Candida albicans SC5314] gi|74586169|sp|Q5A761|CCR4_CANAL RecName: Full=Glucose-repressible alcohol dehydrogenase transcriptional effector; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase gi|46439279|gb|EAK98599.1| potential mRNA deadenylase and CCR4-NOT complex subunit Ccr4p [Candida albicans SC5314] gi|46439356|gb|EAK98675.1| potential mRNA deadenylase and CCR4-NOT complex subunit Ccr4p [Candida albicans SC5314] Length = 787 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 88/327 (26%), Gaps = 42/327 (12%) Query: 18 ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + ++S+N + + + + LL + N + DIV +QE+ Sbjct: 450 PESSDNFTVLSYNTLCQHYATPKMYKFTPSWALQWDYRKNLLEKEVLNYNTDIVCMQEVE 509 Query: 76 SYNAVAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY--- 128 + P T F+S R S+ DS A + ++ + Sbjct: 510 TKTFQEFWLPVMTANGYKGYFFSKTRSKTMSETDSKKVDGCATFFKNDKFSLIHKQNFEY 569 Query: 129 --------PLLGAKDSFSRAGNR----RAVELLVEINGKKIWVLDIHLKSFC-FLDSLEN 175 KD F+R N+ L + +G+KI V++ HL F D Sbjct: 570 NSVCMGSDKYKKTKDLFNRFMNKDNIALISYLQHKESGEKIAVVNTHLHWDPAFNDVKAL 629 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN------DDFWKTID 229 L + + + + V+ GDFN + + ++ Sbjct: 630 QVGILLEELQGIIKKYRHTNSNEDIKNSSIVVCGDFNSVKDSAVYQLFSTGASKGHEDMN 689 Query: 230 PNDSLIRFPKEKDSRC-------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESF 275 D N IDY + Sbjct: 690 GRDYGKFTEDGFHHPFKLKSAYEAVGELPFTNLTPAFTDNIDYIWYSTPTLQVKGLLGRV 749 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 E + SDH PI + Sbjct: 750 DEEYTSHSIGFPDANFPSDHVPILAKF 776 >gi|298386678|ref|ZP_06996233.1| endonuclease/Exonuclease/phosphatase family protein [Bacteroides sp. 1_1_14] gi|298260352|gb|EFI03221.1| endonuclease/Exonuclease/phosphatase family protein [Bacteroides sp. 1_1_14] Length = 343 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 38/343 (11%), Positives = 92/343 (26%), Gaps = 58/343 (16%) Query: 2 IRKYV----LALVFFLVPCTASVAQKV-RLVSWNINTLSEQEGVSLWKN----------- 45 ++K++ L L + + + + +N+ L + + + Sbjct: 1 MKKFLTVWGLLLFISITSYSQEKKYALYSVAFYNLENLFDTIHDAGKNDFEYLPNGKNKW 60 Query: 46 SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + + + + + L D I+ + E+ + + + + Sbjct: 61 NSMKYEAKLKNMSEILSQLSTDKLPLGPTIIGMSEVENRRVLEDLLKQP---ALSDRGYE 117 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 I H + + A K + +++ + R + + G+K+ Sbjct: 118 IVHYEGPDRRGVDCAFFYNPKFFHLTASKLAPYIYENNDTTYKTRGFLIASGTLAGEKVH 177 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 + H S SP+ +Q + LKD + ++S +I GD N Sbjct: 178 FIVNHWPSR-------AAASPARERAGEQVRALKDSL-LNEDSNAKVIIMGDMNDDPMDK 229 Query: 219 GNNDDFW-----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLI 271 + +D + D V N Sbjct: 230 SMAVALGAKRKTQDTKEHDLYNPWWDTLKKGNGTLMYDGKWNLFDQIVFTGNLLGNDRST 289 Query: 272 QESFSEILYNEDDIKSRGKR-----------------LSDHCP 297 + + ++ D + + + SDH P Sbjct: 290 LKYYRNEIFRRDYMFQKEGKYKGYPKRTHAGGVWLNGYSDHLP 332 >gi|296330017|ref|ZP_06872501.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676741|ref|YP_003868413.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp. spizizenii str. W23] gi|296153056|gb|EFG93921.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414985|gb|ADM40104.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp. spizizenii str. W23] Length = 252 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 41/307 (13%), Positives = 84/307 (27%), Gaps = 83/307 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L R Y K DADI+ LQE + + Sbjct: 1 MKLISWNVNGL--------------RAVMRKMDFLSYLKEEDADIICLQETKIQDGQVDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P + + ++++ +S + R Sbjct: 47 QP-DGYHVYWNYAVKKGYSGTAVFSKQ-----------------------------EPLR 76 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL---LSQQAQWLKDWITQKKE 200 + +E + ++ V+ + ++ + Q + L +I + + Sbjct: 77 VMYGIGIEEHDQEGRVITLEFENLFVMTVYTPNSKRGLERIDYRMQWEEALLSYILE-LD 135 Query: 201 SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 P ++ GD N + + + F Sbjct: 136 KKKPVILCGDLNVAHQEIDLKNPKANRNNAGFSDQERGAFTRLLEAGFVDSFRHVYPDLE 195 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 A + +DYFV+ + + + S S SDHC Sbjct: 196 GAYSWWSYRAGARDRNIGWRLDYFVVSERLEEQIEDASI-----------SADVMGSDHC 244 Query: 297 PISIDYD 303 P+ + + Sbjct: 245 PVELMIN 251 >gi|168752009|ref|ZP_02777031.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4113] gi|168756575|ref|ZP_02781582.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4401] gi|168767291|ref|ZP_02792298.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4486] gi|168777230|ref|ZP_02802237.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4196] gi|168779334|ref|ZP_02804341.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4076] gi|195936830|ref|ZP_03082212.1| DNase [Escherichia coli O157:H7 str. EC4024] gi|208815890|ref|ZP_03257069.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4045] gi|208822066|ref|ZP_03262385.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4042] gi|209396778|ref|YP_002269459.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4115] gi|254791984|ref|YP_003076821.1| putative DNase [Escherichia coli O157:H7 str. TW14359] gi|187767486|gb|EDU31330.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4196] gi|188014050|gb|EDU52172.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4113] gi|189003112|gb|EDU72098.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4076] gi|189356304|gb|EDU74723.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4401] gi|189363397|gb|EDU81816.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4486] gi|208732538|gb|EDZ81226.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4045] gi|208737551|gb|EDZ85234.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4042] gi|209158178|gb|ACI35611.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4115] gi|209775986|gb|ACI86305.1| hypothetical protein ECs0868 [Escherichia coli] gi|254591384|gb|ACT70745.1| predicted DNase [Escherichia coli O157:H7 str. TW14359] Length = 253 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 82/288 (28%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ NI+ LR + + ADIV LQE+ + V Sbjct: 9 SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P + F + + + + + H AV + S Sbjct: 59 LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A R + + GK I V+ +HL + Q L +W Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + P ++AGDFN + +D F + Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + LSDH P+S + Sbjct: 215 LRLDRIYVKNTSAS-----------APTALPLRTWRHLSDHAPLSAEI 251 >gi|167752898|ref|ZP_02425025.1| hypothetical protein ALIPUT_01160 [Alistipes putredinis DSM 17216] gi|167659967|gb|EDS04097.1| hypothetical protein ALIPUT_01160 [Alistipes putredinis DSM 17216] Length = 385 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 85/296 (28%), Gaps = 43/296 (14%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 T+ + L+++N+ + R + + + + ++ DIV LQE Sbjct: 118 TSFGRGAITLLTFNVRSF-----------YNDRGQWSFDGVTEVIRRVNPDIVCLQEFNR 166 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL-------QQSYP 129 ++ A+ + N ++T + K+ +L Q + Sbjct: 167 TSSKAEELDSLLSDYDRTVVMEGNRRDPVFPLALYTKYRILGKSHSILGPMKQDGQSVWV 226 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKI---WVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 L D R N + ++ K + ++ + + L + Sbjct: 227 DLLVGDDTIRIFNNHLHSTAITVHDDKYLSEHQFLTDTAGGAKIKNIFRRFRDNSMLRAA 286 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 QA + I ++ GDFN + +D F Sbjct: 287 QADTIARAIAATPGCK---IVCGDFNDTPMSYT-YRVMAQDLDD-----AFRASGKGYSY 337 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + IDY + ++ D LSDH P+ + Sbjct: 338 TFRGFMDVLRIDYVLYSEDLECL-------------DYQVLYDVDLSDHYPVVVRL 380 >gi|323703101|ref|ZP_08114756.1| exodeoxyribonuclease III [Desulfotomaculum nigrificans DSM 574] gi|323531995|gb|EGB21879.1| exodeoxyribonuclease III [Desulfotomaculum nigrificans DSM 574] Length = 262 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 81/303 (26%), Gaps = 72/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ S+NIN + +L + D++ LQE KV Sbjct: 3 FKVASFNIN----------------SIRARQEMLANWLTENKPDVICLQE-------TKV 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 K+ ++ ++ + +A+ + D R Sbjct: 40 MDKDFPVEYFQEI---GYNSLFKGQKSYNGVAILSPHPMT----PIAGDLGDVAEPGEAR 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ K I V++ ++ DS + Y + + L+D+ + + Sbjct: 93 LIAAMV-----KDIPVVNTYVPQGQAPDSEKFAYKLA------WLKALRDYFARNFSAHQ 141 Query: 204 PFVIAGDFNRKINYLGNNDDF------------WKTID--PNDSLIRFPKEKDSRCNANK 249 P + GDFN + +D K ++ ++ Sbjct: 142 PLLWMGDFNVAPEPIDVHDPKRLLGHVGFHPEEHKVLNYVKEWGFQDVFRKHQPEGGHFT 201 Query: 250 NLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ + D R + SDH I Sbjct: 202 FWDYRIRQGLARNLGWRIDHIWATAPLAEKSTNAWI-------DIEPRRLAKPSDHTFIL 254 Query: 300 IDY 302 ++ Sbjct: 255 AEF 257 >gi|315174931|gb|EFU18948.1| exodeoxyribonuclease III [Enterococcus faecalis TX1346] Length = 251 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + LDAD LQE A Sbjct: 1 MKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S A++VR R Sbjct: 45 LELPGYHQYWNYAEKKGYSGTAIVAKEE-ALSVRYGLGI-------------EAHDQEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ + + + + ++ + + Sbjct: 91 -----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK- 137 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F Sbjct: 138 PVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ ++ + L+ + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246 Query: 300 IDYDF 304 + DF Sbjct: 247 VVLDF 251 >gi|161524628|ref|YP_001579640.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC 17616] gi|189350616|ref|YP_001946244.1| metal-dependent hydrolase [Burkholderia multivorans ATCC 17616] gi|160342057|gb|ABX15143.1| Endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC 17616] gi|189334638|dbj|BAG43708.1| metal-dependent hydrolase [Burkholderia multivorans ATCC 17616] Length = 285 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 36/306 (11%), Positives = 85/306 (27%), Gaps = 50/306 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 +R++ WNI + +G + + + + D D++ +QE+ Sbjct: 1 MRMIDWNIQWGRDADGAVDLRRT----------IAAARQLADFDVLCVQEITRGFDALPG 50 Query: 75 -GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + A++ S + A+ + L Sbjct: 51 HPGVDQFAELAALLPGYTVVEAIGADLPSAQPGAPRRQFGNAIATRLPVGRVLRQLLPWP 110 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 D+ + + R A+++ + + V+ HL+ + + + ++A D Sbjct: 111 ADADAPSMPRVALDVELLTASGPLRVVTTHLEFYS--ERQRLAQVDAIRARHREACAHAD 168 Query: 194 WITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + PF ++ GDFN + + + + R Sbjct: 169 RPAPAENDTGPFVATAQSRDAILCGDFNSAFDSAAYRRMLEPIDGAPAFVDAWIAQHPGR 228 Query: 245 C--------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + + D+ + L + R SDH Sbjct: 229 TAPPTAGVYDTAQWSDGPLACDFAFVTDTLLPRLARCEI-----------DGAVRASDHQ 277 Query: 297 PISIDY 302 PI ++ Sbjct: 278 PIVLEL 283 >gi|29348968|ref|NP_812471.1| hypothetical protein BT_3559 [Bacteroides thetaiotaomicron VPI-5482] gi|253571112|ref|ZP_04848519.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 1_1_6] gi|29340875|gb|AAO78665.1| endonuclease/exonuclease/phosphatase family [Bacteroides thetaiotaomicron VPI-5482] gi|251839065|gb|EES67149.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 1_1_6] Length = 343 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 38/343 (11%), Positives = 92/343 (26%), Gaps = 58/343 (16%) Query: 2 IRKYV----LALVFFLVPCTASVAQKV-RLVSWNINTLSEQEGVSLWKN----------- 45 ++K++ L L + + + + +N+ L + + + Sbjct: 1 MKKFLTVWGLLLFISITSYSQEKKYALYSVAFYNLENLFDTIHDAGKNDFEYLPNGKNKW 60 Query: 46 SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + + + + + L D I+ + E+ + + + + Sbjct: 61 NSMKYEAKLKNMSEILSQLSTDKLPLGPTIIGMSEVENRRVLEDLLKQP---ALSDRGYE 117 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 I H + + A K + +++ + R + + G+K+ Sbjct: 118 IVHYEGPDRRGVDCAFFYNPKFFHLTASKLAPYIYENNDTTYKTRGFLIASGTLAGEKVH 177 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 + H S SP+ +Q + LKD + ++S +I GD N Sbjct: 178 FIVNHWPSR-------AAASPARERAGEQVRALKDSL-LNEDSNAKVIIMGDMNDDPMDK 229 Query: 219 GNNDDFW-----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLI 271 + +D + D V N Sbjct: 230 SMAVALGAKRKAQDTKEHDLYNPWWDTLKKGNGTLMYDGKWNLFDQIVFTGNLLGNDRST 289 Query: 272 QESFSEILYNEDDIKSRGKR-----------------LSDHCP 297 + + ++ D + + + SDH P Sbjct: 290 LKYYRNEIFRRDYMFQKEGKYKGYPKRTHAGGVWLNGYSDHLP 332 >gi|333029549|ref|ZP_08457610.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM 18011] gi|332740146|gb|EGJ70628.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM 18011] Length = 344 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 45/344 (13%), Positives = 90/344 (26%), Gaps = 57/344 (16%) Query: 1 MIRKYVLALVFFLVPCTASVAQ----KVRLVSWNINTLSEQEGVSLWKN----------- 45 M KY+L + T AQ + +N+ L + E Sbjct: 1 MKFKYLLLTLCLSFGFTQMKAQKSYATYCVAFYNVENLFDTEDDVDNPGDDEYLPNGANA 60 Query: 46 -SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTER 97 + + + + + D I+ + E+ + + + Sbjct: 61 WTPGKYQKKLDNIAKVISRIGKDYCPAGPAILGVSEVENRRVLEDLVKNER---ISDVGY 117 Query: 98 LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 I H + I A+ K RV D+ R + + + G+ + Sbjct: 118 EIVHYESPDWRGIDVALLYNPKLFRVTNTVAQPYILPDN-PNFKTRDQLLVSGVLAGEPV 176 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 V+ H S S E + + L D + Q + +I GD N + Sbjct: 177 HVIVNHWPSRYGSKSTELREYAASIT-----KSLVDSLQQ-IDPEAKVIIMGDLNDDPDD 230 Query: 218 LGNN-----DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 + K + P + D + D ++ + Sbjct: 231 RSTRVVLNAKKYQKDVKPGGYYNTMWRLYDLGVGSLGYQGKWNLFDQIIITHSLLGSETS 290 Query: 273 ES--FSEILYNEDDIKSRG-----------------KRLSDHCP 297 + ++N+D + + SDH P Sbjct: 291 SLKFWRSEVFNKDFLIRKEGKRKGYPWRTFDGNTFIDGYSDHFP 334 >gi|326794591|ref|YP_004312411.1| endonuclease/exonuclease/phosphatase [Marinomonas mediterranea MMB-1] gi|326545355|gb|ADZ90575.1| Endonuclease/exonuclease/phosphatase [Marinomonas mediterranea MMB-1] Length = 847 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 94/352 (26%), Gaps = 71/352 (20%) Query: 22 QKVRLVSWNINTLSEQE--------GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +R+ S+N+ L G + S++ T + LDADIV L E Sbjct: 454 GDLRIASFNVLNLFNSPFDGAENPFGDNRGAESLEDYNLQLTKIASAITLLDADIVGLME 513 Query: 74 MGSY--------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 + + A+ + + + ++ I + R V + Sbjct: 514 IENNGFDETSAIAALVEAVNTTQPASAAPYAFISADAGYVGSDAIAVGLIYRPSVVTPKK 573 Query: 126 QSY-------PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENT 176 ++ A+ + R A+ + + ++I V+ H KS + Sbjct: 574 KAVLIDMPEQHGTDAEGNQFDKYQRTALLQTFKHRRSRERISVVVNHFKSKGSGCIEDAN 633 Query: 177 YSPSC------SLLSQQAQWLKDWITQK-------------KESLVPFVIAGDFNRKINY 217 S + A L D++ + P + D+N Sbjct: 634 REASDPQSNCSAFRVSAAVALGDYLERNVRGKVMILGDLNSYGKEDPIRVLTDYNAFDPE 693 Query: 218 LGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 T++ P + + +D+ + + Sbjct: 694 FPVYTAEQATLNGAPINDGESVEVTRNYGFTNLVPHFQGDEAFSYTFNGELGSLDHALAN 753 Query: 264 QNAYKFLIQESFSEILYNEDDIKSR-------------GKRLSDHCPISIDY 302 K ++ I E ++ SDH P+ ++ Sbjct: 754 WQLMKHVVDADDWHINSAESNLFEYSSEFTGDLVKSDNAYSSSDHDPVVVEL 805 >gi|322824803|gb|EFZ30090.1| RNA-editing complex protein MP100, putative [Trypanosoma cruzi] Length = 968 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 38/294 (12%), Positives = 83/294 (28%), Gaps = 34/294 (11%) Query: 22 QKVRLVSWNINTLSEQEGVSL--WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + ++L++WN+ + + Y +L + + DAD+V +QE+ Sbjct: 692 KTLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPKRYPVLARVIQQEDADVVGMQEVE---- 747 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + F S + + + S +I+ + V ++ +P+ Sbjct: 748 -------PVFWEFLSKQPWMRENYYFSCGYTSPSISPWGVLMLVHRRRFPVQSITYLNVP 800 Query: 140 AGNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 A + +++ + V HL + S +L + L Sbjct: 801 AWTNHVSLMPVVCLQLPHGPVHVAAAHLLAPYTKSHETARTSQDSALRHHMLKTL----- 855 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS-LIRFPKEKDSRCNANKNLR--- 252 V GDFN + +D + N L+ Sbjct: 856 -----TGDVVTMGDFNDWPTNEFLMPAESQYVDCWPLIYPHDAGKTMDETNTFCKLKVEE 910 Query: 253 -NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---LSDHCPISIDY 302 D + + N+++ SDH +S+ + Sbjct: 911 MFFGRSDKLFLRSRRLAPVEGHLVGTKSVNDENGNKDAPGYLFPSDHYGVSMTF 964 >gi|242317310|ref|ZP_04816326.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106b] gi|242140549|gb|EES26951.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106b] Length = 305 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 85/309 (27%), Gaps = 52/309 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM------- 74 +RL+SWN+ + G T D A+ L D D++ QE+ Sbjct: 19 TMRLISWNVQWGRDANG-----------TVDLARTVDAARGLGDFDVLCAQELTRGFHAL 67 Query: 75 ---GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 S + A++ + + A+ + + L Sbjct: 68 PGGPSGDQYAELAALLPGYAVFDAIGVDLPPLEPGAPRRQFGNALATRLPVERALRHALP 127 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + + + R A+E+ + + V+ HL+ + + L ++A Sbjct: 128 WPASAAAPSMPRCALEVTLRAPFGPLRVVVTHLEYYSA--QQRLAQVDALRRLHREAAAH 185 Query: 192 KDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF----- 237 + PF ++ GDFN D + + Sbjct: 186 ARASAPPETPASPFAPSARAADAIVCGDFNSAYRSDAYRRFLAPFPDAPRFVDAWLARHP 245 Query: 238 ---PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 P + + + D+ + + L + R SD Sbjct: 246 GKTPPMTAGVYDTAQWSEGPMTCDFAFVTDTLVRRLSRCEI-----------DGTVRASD 294 Query: 295 HCPISIDYD 303 H PI ++ Sbjct: 295 HQPIVLELS 303 >gi|111073593|emb|CAL29439.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Onchocerca volvulus] Length = 259 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 39/302 (12%), Positives = 86/302 (28%), Gaps = 68/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N + + DI+ LQE Sbjct: 2 LKIATWNVN----------------SIRKRIDQICNLIIDNQIDIILLQETKCTE----- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y + + + + V K + + + ++ Sbjct: 41 -----KQFPYEEIKKLGYKCAVYGQVARNGVCVLSKYLILEKFKIDIVEGYQEARY---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E +V+ + +KI V+ I++ + DS + + + L + I ++ Sbjct: 92 --IECVVKYDNQKIRVVSIYVPNGQSPDS------NAFAYKLKFFDNLYEKIINLLKNEE 143 Query: 204 PFVIAGDFNRKINYLGNNDDFW------------KTIDP--NDSLIRFPKEKDSRCNANK 249 ++AGD+N ++ + D + + N + + Sbjct: 144 LTIVAGDYNVALDGIDVFDPILLNGKVCFHIREREKLRAILNLGFKDAFRISNPDLQQFT 203 Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY ++ A L DD + K SDH P+ Sbjct: 204 WWHYQDNSFRNNQGMRIDYILLSPQAADRLETCYI-------DDKLRKLKNPSDHTPVIC 256 Query: 301 DY 302 Sbjct: 257 VI 258 >gi|238878752|gb|EEQ42390.1| conserved hypothetical protein [Candida albicans WO-1] Length = 785 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 88/327 (26%), Gaps = 42/327 (12%) Query: 18 ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + ++S+N + + + + LL + N + DIV +QE+ Sbjct: 448 PESSDNFTVLSYNTLCQHYATPKMYKFTPSWALQWDYRKNLLEKEVLNYNTDIVCMQEVE 507 Query: 76 SYNAVAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY--- 128 + P T F+S R S+ DS A + ++ + Sbjct: 508 TKTFQEFWLPVMTANGYKGYFFSKTRSKTMSETDSKKVDGCATFFKNDKFSLVHKQNFEY 567 Query: 129 --------PLLGAKDSFSRAGNR----RAVELLVEINGKKIWVLDIHLKSFC-FLDSLEN 175 KD F+R N+ L + +G+KI V++ HL F D Sbjct: 568 NSVCMGSDKYKKTKDLFNRFMNKDNIALISYLQHKESGEKIAVVNTHLHWDPAFNDVKAL 627 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN------DDFWKTID 229 L + + + + V+ GDFN + + ++ Sbjct: 628 QVGILLEELQGIIKKYRHTNSNEDIKNSSIVVCGDFNSVKDSAVYQLFSTGASKGHEDMN 687 Query: 230 PNDSLIRFPKEKDSRC-------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESF 275 D N IDY + Sbjct: 688 GRDYGKFTEDGFHHPFKLKSAYEAVGELPFTNLTPAFTDNIDYIWYSTPTLQVKGLLGRV 747 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 E + SDH PI + Sbjct: 748 DEEYTSHSIGFPDANFPSDHVPILAKF 774 >gi|331239161|ref|XP_003332234.1| hypothetical protein PGTG_14530 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309311224|gb|EFP87815.1| hypothetical protein PGTG_14530 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 307 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 36/313 (11%), Positives = 81/313 (25%), Gaps = 51/313 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKR------TTSDYTLLRQYAKNLDADIVFLQEMGSY 77 +++ ++NI ++ ++ L+ K DIV LQE+ + Sbjct: 9 LKVATFNIRYSPLNVNNTVSTQVPNNGTGEDLWSNRLPLIADQIKWESPDIVALQEVLGH 68 Query: 78 N--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + T P + Sbjct: 69 QYVGLKDQLIPAQYASVGVGRNDGVTRGEYVPLFWKTDRFKALSVQYFWLSDKPDVPGSV 128 Query: 136 SFSRAGNRRAVELLVEI----------NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 + A R + ++ + + +V++ H F ++ + + S L+ Sbjct: 129 GWDAAEPRMVTLVTLKPLSTGASPDDQSNQPFYVMNTH-----FDNAGQKARTESAKLIL 183 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNR------------KINYLGNNDDFWKTIDPNDS 233 ++A L E P ++ GD N K + + Sbjct: 184 KKANEL------TSEKGKPVLLIGDLNLVREQSAYQVLTGKATDQPAHRASDRFFQDCGE 237 Query: 234 LIRFPKEKDSRCNANKNLRN--KIPIDYFVM--DQNAYKFLIQESFSEILYNEDDIKSRG 289 + P + + IDY + ++ + + I Sbjct: 238 QVGRPFGAHNATFTGFQHDPEDLMKIDYIMTMSSPPNLWQTLKYGVIPNQFQNESI---- 293 Query: 290 KRLSDHCPISIDY 302 +SDH +S Sbjct: 294 --VSDHRMVSAVI 304 >gi|291298052|ref|YP_003509330.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] gi|290567272|gb|ADD40237.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] Length = 305 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 30/293 (10%), Positives = 74/293 (25%), Gaps = 41/293 (13%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + +++ ++++N+ ++ S L+++ I+ QE + Sbjct: 45 PATGEQLHVMTFNVRWDTDP--------SPHSWAERRILIKELLGRERPTILGTQEGLLH 96 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + + + + R + T+ + P ++ Sbjct: 97 QGQHLLADQKGYDWVHLSRRGGGED-EATAVLYDTSRLRVTNYGHLWHSDTPQSMGSTTW 155 Query: 138 SRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R L + K+ +++ HL S + A +K+ + Sbjct: 156 GNEIPRMMTWLRFTDSASDKEFVLVNTHLDH------------KSAPSREKSAAQIKELV 203 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNANKNLRN- 253 VP ++ GDFN T++ Sbjct: 204 ASF---DVPVLVTGDFNTAQGTAPYTTLVDGTTLEDTWETAEQQLTPAYGTFNGWKPEPV 260 Query: 254 --KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI--SIDY 302 ID+ + + G SDH + + Sbjct: 261 DGGDRIDWVLATPGTAVAKTA---------VNTWSVDGLTPSDHWAVQSLVTL 304 >gi|186476236|ref|YP_001857706.1| exodeoxyribonuclease III Xth [Burkholderia phymatum STM815] gi|184192695|gb|ACC70660.1| exodeoxyribonuclease III Xth [Burkholderia phymatum STM815] Length = 258 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 29/300 (9%), Positives = 78/300 (26%), Gaps = 68/300 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N+L + + + D++ LQE Sbjct: 1 MKLATWNVNSL----------------KVRQQHVIDWLELSRTDVLCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + + ++ V ++ F R Sbjct: 35 LKLPDEKFPRAELAEKGYRSWFAGQKTYNGVGILVRDG-VSVDEGSIVRNIPGFEDPQQR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + V+ + + + + Y + + +WI+ + Sbjct: 94 VIAATV-----EGVRVVCAYFPNGQAPGTDKFAYK------LRWLDAMYEWISSELTQHP 142 Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIR----------FPKEKDSRCNANK 249 + GD+N +D + P + + D Sbjct: 143 KLALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAQFNRLIELGLVDSFRLFDQPEKTFT 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID+ ++ + + D + + SDH P+ Sbjct: 203 WWDYRMLAFRRNAGLRIDHILLSKPLAASCTHC-------DVDKTPRKWDQPSDHAPVVA 255 >gi|307609276|emb|CBW98745.1| hypothetical protein LPW_05491 [Legionella pneumophila 130b] Length = 251 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 41/286 (14%), Positives = 88/286 (30%), Gaps = 50/286 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 V L+++NI+ V +R L+ D VFLQE+ Sbjct: 8 VSLITYNIHKGFGVGAVRFL----------LPEMRDAIAGLNPDFVFLQEVQGKHRKREK 57 Query: 82 KVFPKN----TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 ++ I + ++K H A+ K +S L Sbjct: 58 RIVSWPDSPQCEYIAENIWPHYVYAKNAVYQSGHHGNAILSKYPFESFESINLSN----- 112 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 +R + ++++ I +L +HL F + ++Q + L I Sbjct: 113 MNRASRGILHTQLKLDNNIIHLLCVHLGLFK-------------AERTEQCKALIQRIKD 159 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 P ++AGDFN + + + + ++ + + + ++ + + Sbjct: 160 VVPKNEPLIMAGDFNDWRHV--ISKILAENLGIEEAFVALEGQH---ARSFPAIKPALCV 214 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + + + LSDH P+ ++ Sbjct: 215 DRVYFRGMKVQEVAC-----------LQGKPWRMLSDHLPLYARFE 249 >gi|73666996|ref|YP_303012.1| exodeoxyribonuclease III [Ehrlichia canis str. Jake] gi|72394137|gb|AAZ68414.1| Exodeoxyribonuclease III [Ehrlichia canis str. Jake] Length = 279 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 44/318 (13%), Positives = 82/318 (25%), Gaps = 78/318 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++ +WN+N LR + D DI LQE+ N Sbjct: 2 TLKIATWNVN----------------SIRKRLDHLRHWLVKYDIDIALLQEIKCTND--- 42 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL-------------QQSYP 129 + + + + +A+ K V Y Sbjct: 43 -------QFPFLDLESLGYKCYVNGQKARNGVAIITKYPIVEELVTDIFSSDYKSSLCYK 95 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 L ++ +R +E +V N K+ V I++ + +DS + Sbjct: 96 LSSEGFIYNYQESRY-LECVVLYNEVKVRVASIYIPNGQSVDS------DAFQYKLGFFD 148 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSL 234 L D ++ GD+N + + ++ I Sbjct: 149 QLIDRALFLLNKEEILILGGDYNVAPYPIDVYSTEIMDGRLCFHQYEREKFRVILNLGFT 208 Query: 235 IRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 F + K ID ++ A L+ + L D Sbjct: 209 DAFRVLNEHDQK-FSWWNYKAGAWQENRGLRIDNLLLSPQAVDKLLSCVIHDELRGLDT- 266 Query: 286 KSRGKRLSDHCPISIDYD 303 SDH P+ + Sbjct: 267 ------PSDHAPVICTLE 278 >gi|53713851|ref|YP_099843.1| exodeoxyribonuclease [Bacteroides fragilis YCH46] gi|60682064|ref|YP_212208.1| exodeoxyribonuclease [Bacteroides fragilis NCTC 9343] gi|253565813|ref|ZP_04843268.1| exodeoxyribonuclease [Bacteroides sp. 3_2_5] gi|265764197|ref|ZP_06092765.1| exodeoxyribonuclease III [Bacteroides sp. 2_1_16] gi|52216716|dbj|BAD49309.1| exodeoxyribonuclease [Bacteroides fragilis YCH46] gi|60493498|emb|CAH08285.1| exodeoxyribonuclease [Bacteroides fragilis NCTC 9343] gi|251946092|gb|EES86499.1| exodeoxyribonuclease [Bacteroides sp. 3_2_5] gi|263256805|gb|EEZ28151.1| exodeoxyribonuclease III [Bacteroides sp. 2_1_16] Length = 253 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 87/304 (28%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++++N+N L L ++ + D++ LQE + A Sbjct: 1 MKIITYNVNGLRAAVNKGLP---------------EWLAEENPDVLCLQETKLQPEQYPA 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F + + + + + + +A+ K + G Sbjct: 46 EAFEALGYKAYLYSAQKKGY----------SGVAILTKVEP----DHIEYGMGIEEYDNE 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + + V+ ++ S D + + + + ++T+ ++S Sbjct: 92 GRF-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEAFQKYVTELRKS 139 Query: 202 LVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ GD+N + + + + Sbjct: 140 RPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLSAGFIDSFRTLYPQKQE 199 Query: 246 NANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + R IDY ++ + L + + SDHCP+ Sbjct: 200 YTWWSYRFNSRAKNKGWRIDYCMVSEPVRSLLKEAVILNNAVH-----------SDHCPM 248 Query: 299 SIDY 302 +++ Sbjct: 249 ALEI 252 >gi|325276378|ref|ZP_08142153.1| exodeoxyribonuclease III [Pseudomonas sp. TJI-51] gi|324098490|gb|EGB96561.1| exodeoxyribonuclease III [Pseudomonas sp. TJI-51] Length = 264 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 78/304 (25%), Gaps = 70/304 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + +R+ ++NIN +S L ++ K DI LQE Sbjct: 2 KNLRIATFNINGISS----------------RLPALLEWLKRERPDIACLQE-------- 37 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + +A+ ++ L+ L G +D Sbjct: 38 --LKAADNKFPRQEIEAAGYGCVYQGQPAWNGVAILARDSEPLEVRRGLPGMEDDTQSRY 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 A ++ V ++L + + Y + + L + Sbjct: 96 LEAAAHGVL--------VGCLYLPNGNPQPGPKFDYK------LRWFECLIQHARTLYAN 141 Query: 202 LVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCN 246 P ++AGDFN L D ++ + Sbjct: 142 GHPALLAGDFNVVPTDLDIYDTRSWLKDALLQPESRACFEHLLTQGWTDAVRHLYPDERV 201 Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++++ +L D + SDH P+ Sbjct: 202 YTFWDYFRNHWARNAGLRIDHLLLNRELSPYLKGAGV-------DAWVRNEAKASDHAPV 254 Query: 299 SIDY 302 ++ Sbjct: 255 WVEL 258 >gi|304392145|ref|ZP_07374087.1| endonuclease/exonuclease/phosphatase [Ahrensia sp. R2A130] gi|303296374|gb|EFL90732.1| endonuclease/exonuclease/phosphatase [Ahrensia sp. R2A130] Length = 380 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 51/377 (13%), Positives = 100/377 (26%), Gaps = 96/377 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKR----------TTSDYTLLRQY------------ 60 +R+ ++N L + S WK +R T + + L Q Sbjct: 2 SLRIATFNAENLMARFDFSGWKREGRRDRSLTLREIETEAQFRALEQARVVSHEDDARQM 61 Query: 61 ----AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + ADI+ LQE+ + + + + I AI Sbjct: 62 TALAIADCRADIICLQEVEDLATLEAFERNYLLPMTGLDYPQKEWRQGNDGRGIDVAIMA 121 Query: 117 RKK------NVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKK 156 R+K +S+ D +R R +E+ +++ GK Sbjct: 122 REKTADGEEIEIRSVKSHAGRTMADLEVLTPRLIELGFEKDTRLFRRDCLEVNLKVGGKH 181 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFN 212 V H KS + + +A +K I + + + + +++ GD N Sbjct: 182 FTVFVAHFKSMGGPRGGLTGRDFTMPVRQAEAAGVKRIIEDRFGAERAADMRWMVCGDLN 241 Query: 213 RKINYLGN---------NDDFWK-------TIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 L D + +D ++ + K Sbjct: 242 DYAARLAITGDKAAGHSFDWIAEETHGSAPLLDDGFAINLVDRRAQDDRWTLFYANGKSA 301 Query: 257 ---------------IDYFVMDQNAYK---FLIQESFS------------EILYNEDDIK 286 +DY + K + + + + Sbjct: 302 SARLPQERPTRHLVQLDYLLASPRLAKGNAKAVPDIIRNGQPYRTVFPPDQEVERYPRTG 361 Query: 287 SRGKRLSDHCPISIDYD 303 + SDHCP+ + D Sbjct: 362 WDRPKASDHCPVVVSLD 378 >gi|296085488|emb|CBI29220.3| unnamed protein product [Vitis vinifera] Length = 393 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 42/331 (12%), Positives = 84/331 (25%), Gaps = 52/331 (15%) Query: 24 VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 LVS+NI + + + + + +NL AD + LQE+ Y++ Sbjct: 58 FSLVSYNILAQVYVKSSLFPHSPSPCLKWKARSQAILTVLRNLGADFLCLQEVDEYDSFY 117 Query: 82 KV-FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ--------------- 125 K N + Y H ++A V ++ + Sbjct: 118 KGNMDSNGYSSIYVQRSGQKHDGCGIFYKHNSAELVLEEKIEYNDLVDLNDDGSYSNDRH 177 Query: 126 ---------------QSYPLLGAKDSFSRAGNRR-------AVELLVEINGKKIWVLDIH 163 S P ++ R + + ++ + Sbjct: 178 CDTPASANSDAEPKKGSSPQNTTEERGDPNDPRVRLKRDCVGIMAAFRLKDPSHHLVIVA 237 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 + + L + K ++ K E ++AGDFN Sbjct: 238 NTHLYWDPEWADVKLAQAKYLLSRLAQFKTVVSDKFECTPSVLVAGDFNSTPGDKVYQYL 297 Query: 224 FW-----KTIDPNDSLI-----RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ- 272 ++ D L + + N +DY + + + Sbjct: 298 VSGNSSVPQLECLDGLPIPLCSVYDFTRGEPPFTNCTPDFTNTLDYIFFSPSGHIKPVSF 357 Query: 273 -ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 E + SDH PI ++ Sbjct: 358 LELPEPDSSDVAGGLPNHHHPSDHLPIGAEF 388 >gi|239942790|ref|ZP_04694727.1| hypothetical protein SrosN15_17486 [Streptomyces roseosporus NRRL 15998] gi|239989249|ref|ZP_04709913.1| hypothetical protein SrosN1_18253 [Streptomyces roseosporus NRRL 11379] gi|291446259|ref|ZP_06585649.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291349206|gb|EFE76110.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length = 294 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 82/290 (28%), Gaps = 59/290 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----SYN 78 +R+ ++NI+ + +G D ++L+AD++ LQE+ S + Sbjct: 49 PLRVATYNIHAGAGMDGAF-----------DLDRQTAELRSLNADVIGLQEVDRHWGSRS 97 Query: 79 AVAKVFPKN-----TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + + F L + A+ R + VR L Sbjct: 98 EWRDLAGELARRLRMYVSFAPIYSLDPAEPGGPRAEYGVAVLSRHRIVRAENHEITRLST 157 Query: 134 KDSFSRAGNRRAV-ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 +D E++V + G + V HL Y P ++ Q + Sbjct: 158 QDPNPVPAPAPGFGEVVVRVRGLPVHVYVTHL-----------DYRPDPAVRVAQIADTR 206 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + + + P ++ GD N + W+ + D Sbjct: 207 RIMAEDRG---PKILLGDLNAEPA-APELAPLWRELTDADP----------GAPTFPAQD 252 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ + ++ SDH + D Sbjct: 253 PVKRIDFVAVSKD-------------RTGVRRAWVPESLASDHRAVVADL 289 >gi|237717287|ref|ZP_04547768.1| metallophosphoesterase [Bacteroides sp. D1] gi|237719038|ref|ZP_04549519.1| metallophosphoesterase [Bacteroides sp. 2_2_4] gi|262406053|ref|ZP_06082603.1| metallophosphoesterase [Bacteroides sp. 2_1_22] gi|293371916|ref|ZP_06618320.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|294648117|ref|ZP_06725660.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294806860|ref|ZP_06765685.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|298480123|ref|ZP_06998322.1| secreted protein [Bacteroides sp. D22] gi|229443270|gb|EEO49061.1| metallophosphoesterase [Bacteroides sp. D1] gi|229451816|gb|EEO57607.1| metallophosphoesterase [Bacteroides sp. 2_2_4] gi|262356928|gb|EEZ06018.1| metallophosphoesterase [Bacteroides sp. 2_1_22] gi|292633162|gb|EFF51739.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|292636501|gb|EFF54976.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294445889|gb|EFG14531.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|295085514|emb|CBK67037.1| Metal-dependent hydrolase [Bacteroides xylanisolvens XB1A] gi|298273932|gb|EFI15494.1| secreted protein [Bacteroides sp. D22] Length = 263 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 47/288 (16%), Positives = 80/288 (27%), Gaps = 67/288 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 VR++++N+ + L + K+ D V LQE+ S + Sbjct: 27 VRVMTYNLRFG---------------ELASLEELAHHIKSFKPDFVALQEVDSKTDRKRT 71 Query: 84 FPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + Y T + K + + I + K + Q L R Sbjct: 72 PHQKGKDFISELAYHTGMFGLYGKTIDYSTGYYGIGMLSKYPYISVQKIMLPHPVKEHER 131 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R +E L E+ I HL S ++Q +++ Sbjct: 132 ---RAMLEGLFEMGNDTIVFTSTHL------------DVNSQETRAEQIKFITGHFKNY- 175 Query: 200 ESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 P ++ GDFN + F + D + I Sbjct: 176 --KYPVILGGDFNARHYSEAIRGMDSWFAASNDD---------------FGMPAWKPVIK 218 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY +I + L LSDH PI + ++ Sbjct: 219 IDYLFAYPQKGWRVISTQTVQSL------------LSDHLPIITELEY 254 >gi|237740967|ref|ZP_04571448.1| exodeoxyribonuclease III [Fusobacterium sp. 4_1_13] gi|294784430|ref|ZP_06749721.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_27] gi|229431011|gb|EEO41223.1| exodeoxyribonuclease III [Fusobacterium sp. 4_1_13] gi|294488002|gb|EFG35357.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_27] Length = 253 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 82/305 (26%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + + Y +ADI LQE +A Sbjct: 1 MKLISWNVNGIRA---------------AIKKGFLDYFNEQNADIFCLQETK-LSAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + G R Sbjct: 45 LELKGYHQYWNYAEKKGY----------SGTAIFTKQEPLTVS----YGLGIEEHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +K +++ ++ + + ++ ++ Sbjct: 91 -----VITLEFEKFYMVTVYTPN-------SKDELLRLDYRMTWEDEFRKYLKNLEKKK- 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + + + F + Sbjct: 138 PVVVCGDLNVAHEEIDLKNPKTNRRNAGFTDEERGKFTELLDSGFIDTFRYFYPNLEQVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + K L+ + SDHCP+ Sbjct: 198 SWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEIHTQI-----------EGSDHCPVV 246 Query: 300 IDYDF 304 + DF Sbjct: 247 LILDF 251 >gi|169116575|gb|ACA42592.1| Mpc [Enterobacter sp. Ceibso-001] Length = 253 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 39/286 (13%), Positives = 75/286 (26%), Gaps = 49/286 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++++ NI+ LR + + ADIV LQE+ + V Sbjct: 9 SLKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P F + +++ + H AV + S Sbjct: 59 MHFENWPDTPHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRFPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + R + + + + + Q Q L DW Sbjct: 114 VGESEKRGLLYCRITPPALDFPIHVGCVHLGLR-----------EAHRQAQLQMLADWTN 162 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 P V+AGDFN + ++ F + + + Sbjct: 163 A-LPEGEPVVVAGDFNDWRQRANHPLKVKAGLEE-----IFTRSRGRPARTFPVRFPLLR 216 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + + LSDH P+S + Sbjct: 217 LDRIYVKNAHASS-----------PTALALLNWRHLSDHAPLSAEI 251 >gi|225456791|ref|XP_002277389.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297733638|emb|CBI14885.3| unnamed protein product [Vitis vinifera] Length = 357 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 44/339 (12%), Positives = 97/339 (28%), Gaps = 85/339 (25%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + ++ ++WN N+ + R +++ ++ +LD D++ +QE+ A + Sbjct: 38 EPLKFLTWNANSF------------LIRVKNNWPEFTKFVSDLDPDVIAVQEVRMPAAGS 85 Query: 82 KVFPKNTWC----------------IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 K PKN S N+ S D A Sbjct: 86 KGAPKNHGELKDDTSSSREEKKILMHALSRPPFGNYRVWWSLADSKYAGTALFVKKCFQP 145 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 + + + R + E +L+ ++ + + D S Sbjct: 146 KKVSFSIDQKASKHEPEGRVILAEFE----SFRLLNTYVPNNGWKDEET-----SFQRRR 196 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG-------------------------- 219 + + + +++ + S P + GD N + Sbjct: 197 KWDKRMLEFV--VQSSDKPLIWCGDLNVSHEEIDVSHPEFFSAAKHNGYVPPNKEDCGQP 254 Query: 220 -----NNDDFWKTIDPNDSLIRFP----------KEKDSRCNANKNLRNKIPIDYFVMDQ 264 F + + + S K ++ IDYF++ + Sbjct: 255 GFTLAERRRFGGILKEGKLVDAYRLLHKEKDMEGGFSWSGNPIGKYRGKRMRIDYFIVPE 314 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ I+ +G SDHCP+S++ Sbjct: 315 ALKDRIVACEIH-----GQGIELKGFYGSDHCPVSLELS 348 >gi|270339983|ref|ZP_06006639.2| endonuclease/exonuclease/phosphatase family protein [Prevotella bergensis DSM 17361] gi|270333044|gb|EFA43830.1| endonuclease/exonuclease/phosphatase family protein [Prevotella bergensis DSM 17361] Length = 361 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 91/352 (25%), Gaps = 63/352 (17%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRL---VSWNINTLSEQEGVSLWKN-----------S 46 M +K +L + + S +K + +N L + + Sbjct: 1 MKQKVMLFALMLSAMLSVSAQKKFSVYAVGFYNQENLFDTCHDEGKNDHEFLPTGSYRWD 60 Query: 47 VKRTTSDYTLLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + T + + ++ I+ L E+ + + + + + Sbjct: 61 GLKYTRKLRNMARALSDMGTGTLPGVGCAIIGLSEVENAKVLTDLCNQPELQ---ARNYQ 117 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRV-LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 H + I A+ RV + P + + S R + + E+ G+ + Sbjct: 118 FCHVEGPDKRGIDCAVLYNPSLFRVKDVKLVPYVPTEKQNSDFKTRGFLTVSGELAGEHV 177 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 V+ HL S + QA+ +KD + Q + + GD N Sbjct: 178 AVIVCHLPSRFSGSYYREVGAA-------QAKAVKDSLLQN-DKNCKVFVMGDMNDDPTN 229 Query: 218 LGN------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 +D K + + + D ++ N Sbjct: 230 KSMCEILRGKEDIAKVGEGDMYNPWYNILTKQGTGTLMYQGGWNLFDQILLSPNLLNPKG 289 Query: 272 QESFSEILY-----------------------NEDDIKSRGKRLSDHCPISI 300 F E+ Y SDH P+ + Sbjct: 290 SRDFRELKYWKCEIQRMPYLFQTEGKYKGSPKRTTAGGVWLDGYSDHLPVCV 341 >gi|224367710|ref|YP_002601873.1| hypothetical protein HRM2_05950 [Desulfobacterium autotrophicum HRM2] gi|223690426|gb|ACN13709.1| conserved hypothetical protein [Desulfobacterium autotrophicum HRM2] Length = 253 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 36/290 (12%), Positives = 83/290 (28%), Gaps = 44/290 (15%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + ++++N+ +G W+N K ++ D V QE+ ++ Sbjct: 2 TDPGSFSVMTFNLRFGLADDGPDCWENRKKGYPL-------LFEHYQPDFVGFQEVNNFQ 54 Query: 79 A--VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 A + ++ + T + + T A + Q L Sbjct: 55 ADFLCRLLDGYGFIGRRDTSPELWQNNLIFYRKQWTCKAANHLFLSRTPQKESRLDGSRW 114 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R+ E + + + H + ++ + A + D+++ Sbjct: 115 -----PRQCTLGQFEQGDMAVVMANTHFDF-------------AETVQALSAGLVVDFLS 156 Query: 197 QKKE---SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 + + +P VI GDFN + + N F + Sbjct: 157 EFSPGSLTDLPTVITGDFNSIPGGAAH-----RVFLDNGFEDAFENAHAYTFHGFTGKDR 211 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID+ + + + + G SDH P+ +++ Sbjct: 212 GGHIDWILYRG---------GITPLNQKIVRERFSGHFPSDHFPVLVEFT 252 >gi|159028078|emb|CAO87155.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 260 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 38/286 (13%), Positives = 78/286 (27%), Gaps = 34/286 (11%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+ +S+NI W + + DI+ QE + + Sbjct: 2 KLTAMSFNIRYDKPDPDERNW-------RVRREAVAALIAHYSPDIIGTQEARANQLLDL 54 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA-KDSFSRAG 141 + S R + + + + + L ++ ++G+ +++ Sbjct: 55 HRLLPKYQSLGSDRRGTGLDEHCAILYQPSRLKCLEIYEFWLSETPDVIGSITEAWGNPY 114 Query: 142 NRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + G+ + + HL + D ++ + Q KD++ Sbjct: 115 PRMVTGAKFRTLEGQTLQFYNTHLDYYS--DKAKDLGAKCIQERFCQLDLTKDYL----- 167 Query: 201 SLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 + GDFN L I D+L + N + I Sbjct: 168 -----FLTGDFNVNSQRLPRQILTQPLQSEIKLKDALADLELAEQMSFNNYTDTPYLA-I 221 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D D + D + SDH P+ + Sbjct: 222 DTIYYDSRLQLDWV---------KVDPSRWLNLIPSDHYPVIAAFT 258 >gi|157158045|ref|YP_001461980.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli E24377A] gi|300822925|ref|ZP_07103060.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 119-7] gi|300922814|ref|ZP_07138900.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 182-1] gi|301327982|ref|ZP_07221147.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 78-1] gi|331667154|ref|ZP_08368019.1| putative cytoplasmic protein [Escherichia coli TA271] gi|331676525|ref|ZP_08377221.1| putative cytoplasmic protein [Escherichia coli H591] gi|157080075|gb|ABV19783.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli E24377A] gi|300420846|gb|EFK04157.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 182-1] gi|300524466|gb|EFK45535.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 119-7] gi|300845547|gb|EFK73307.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 78-1] gi|320198979|gb|EFW73576.1| Endonuclease/Exonuclease/phosphatase family protein [Escherichia coli EC4100B] gi|331065510|gb|EGI37403.1| putative cytoplasmic protein [Escherichia coli TA271] gi|331075214|gb|EGI46512.1| putative cytoplasmic protein [Escherichia coli H591] Length = 253 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 82/288 (28%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ NI+ LR + + ADIV LQE+ + V Sbjct: 9 SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P + F + + + + + H AV + S Sbjct: 59 LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A R + + GK I V+ +HL + Q L +W Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + P ++AGDFN + +D F + Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRVHGRPARTFPVQFPL 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + LSDH P+S + Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251 >gi|332187443|ref|ZP_08389181.1| calx-beta domain protein [Sphingomonas sp. S17] gi|332012604|gb|EGI54671.1| calx-beta domain protein [Sphingomonas sp. S17] Length = 1645 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 79/303 (26%), Gaps = 49/303 (16%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA--KNLDADIVFLQEMGSYN 78 A + + ++N+ L + + +L DI+ +QE+ + Sbjct: 856 ANHLSIATYNLENLDPSDN-------------KFDVLASNIVYNLRAPDILAVQEIQDAD 902 Query: 79 AVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + N + + N +I Sbjct: 903 GAGTGSDLSGTVTAQGLIDSIYAQSGLRYAYIEVAPTTANSTGGEPNGNIRNGFFYNVDR 962 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP- 179 V ++ S L+ + +R + E G+K+ +D+H S D L P Sbjct: 963 VSYVEGSAALITGSAYNN---SRNPLVAQFEFAGQKVTAIDVHFTSRGGSDPLWGNNQPP 1019 Query: 180 ---SCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + + QA +K +I + + GD+N Sbjct: 1020 ADAGDAARTAQAAGVKAYIQEHLADDPSFNVAVLGDWNGFYFEEAQTQLTDPA-KGGVLT 1078 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + N ID ++ +S +D R +D Sbjct: 1079 NLNTLLSPEERYSYLFGGNAQQIDNILVTGGLVTNAQYDSVHLNSQFGED------RATD 1132 Query: 295 HCP 297 H P Sbjct: 1133 HDP 1135 >gi|327402657|ref|YP_004343495.1| exodeoxyribonuclease III Xth [Fluviicola taffensis DSM 16823] gi|327318165|gb|AEA42657.1| exodeoxyribonuclease III Xth [Fluviicola taffensis DSM 16823] Length = 254 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 88/306 (28%), Gaps = 79/306 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81 ++L+S+N+N + G S + K + AD++ LQE + + Sbjct: 1 MKLLSFNVNGIRAIAGKSFLTD---------------MKEMQADVICLQETKATVEQVLE 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 V P + ++ + + ++ A+ K + + D R Sbjct: 46 TVNPLDYPFVYANE----------AGRKGYSGTAIISKVEPLSVVYDMGVSHHDEEGR-- 93 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 ++ K +++ +++ + + + L+ Sbjct: 94 -------VICAEYDKFYLITVYVPNSGSELLRLPYRKTWDADFLSYLKNLEA-------- 138 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS---------------LIRFPKEKDSRCN 246 P V+ GDFN + L+ + K+ Sbjct: 139 KKPVVVCGDFNVAHKAIDLARPKANYNKSAGFMQEEIDGMDAFTANGLVDSWRAKNGDEV 198 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDYF++ + + + + ++ SDHCP Sbjct: 199 KYTWWSYRGGAREKNVGWRIDYFLVSEGFVPKIKEATIHNEIF-----------GSDHCP 247 Query: 298 ISIDYD 303 + ++ Sbjct: 248 VGVELS 253 >gi|300790754|ref|YP_003771045.1| endonuclease/exonuclease/phosphatase family protein [Amycolatopsis mediterranei U32] gi|299800268|gb|ADJ50643.1| putative endonuclease/exonuclease/phosphatase family protein [Amycolatopsis mediterranei U32] Length = 821 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 35/328 (10%), Positives = 81/328 (24%), Gaps = 69/328 (21%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYN 78 ++ + ++N+ L+ + + Y L + DIV L+E+ Sbjct: 492 TGELAVATYNVENLAPGDP-----------QAKYDRLGEAVVTHLATPDIVNLEEIQDNT 540 Query: 79 AVAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 V + + + + +I A V Sbjct: 541 GATDDGTVAADQTLQKFTDAIVAKGGPRYQWREIDPVNDQDGGQPGGNIRVAFLFNPARV 600 Query: 122 RVLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 + + P + + +R+ + G+ ++V+ Sbjct: 601 SFVDRPGGTSTTAVGVVREHGKAHLTASPGRVDPANEAWTTSRKPLAGEFVFKGRTVFVI 660 Query: 161 DIHLKSFCFLDSLENTYSPSCS----LLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRK 214 H S + P ++QA L+ ++ + V+AGD N Sbjct: 661 ANHFNSKGGDQPTHGRFQPPARSSEVQRAKQATVLRGFVDSLLAADRNANIVVAGDLNDY 720 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 ++ + +D+ + + + Sbjct: 721 PFSP----AVQTLTAGGVLKDLIASVPEAERYSYVFEGQSQVLDHILASR--APRGVDYD 774 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302 I + SDH P I + Sbjct: 775 VVHINA------EFADQASDHDPQVIRF 796 >gi|256846719|ref|ZP_05552175.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_36A2] gi|256717939|gb|EEU31496.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_36A2] Length = 253 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 82/305 (26%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + + Y +ADI LQE +A Sbjct: 1 MKLISWNVNGIRA---------------AIKKGFLDYFNEQNADIFCLQETK-LSAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + G R Sbjct: 45 LELKGYHQYWNYAEKKGY----------SGTAIFTKQEPLSVS----YGLGIEEHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +K +++ ++ + + ++ ++ Sbjct: 91 -----VITLEFEKFYMVTVYTPN-------SKDELLRLDYRMTWEDEFRKYLKNLEKKK- 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + + + F + Sbjct: 138 PVVVCGDLNVAHEEIDLKNPKTNRRNAGFTDEERGKFTELLDSGFIDTFRYFYPNLEQVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + K L+ + SDHCP+ Sbjct: 198 SWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEIHTQI-----------EGSDHCPVV 246 Query: 300 IDYDF 304 + DF Sbjct: 247 LILDF 251 >gi|114327927|ref|YP_745084.1| exodeoxyribonuclease III [Granulibacter bethesdensis CGDNIH1] gi|114316101|gb|ABI62161.1| exodeoxyribonuclease III [Granulibacter bethesdensis CGDNIH1] Length = 259 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 82/305 (26%), Gaps = 72/305 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 V++ +WN+N + + + DI+ LQE+ A Sbjct: 2 PVKIATWNVN----------------SIRQREGHVLSWLERNQPDILLLQEIKCETAA-- 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-VLQQSYPLLGAKDSFSRAG 141 + + + +AV + V Q++ P L D+ +R Sbjct: 44 --------FPAQAFAKLGYQAEAVGQKAYNGVAVLSRVPFEVTQRTLPGLPPDDAQARYI 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 RA+ ++ +++L + Y + L + Sbjct: 96 EIRALNTIIG---------NLYLPNGNSGGEAGYAYK------LGWMEHLAQHAASLLAA 140 Query: 202 LVPFVIAGDFNRKINYL-------GNNDDFWKTIDPNDS-------LIRFPKEKDSRCNA 247 ++AGD+N D + L + Sbjct: 141 GEDLILAGDYNVCPTEEDYAPGALPPEDALLRPETRARFRSLLWLGLTDAVRAMRPSGQI 200 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ + L I D ++ + SDH P+ Sbjct: 201 YTFWDYQAGAWPRDRGLRIDHALLSSRMAERL-------IEALPDRMERDQPQPSDHVPV 253 Query: 299 SIDYD 303 I ++ Sbjct: 254 IISFE 258 >gi|332089000|gb|EGI94112.1| endonuclease/Exonuclease/phosphatase family protein [Shigella boydii 5216-82] Length = 253 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 81/288 (28%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ NI+ LR + + ADIV LQE+ + V Sbjct: 9 SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P + F + + + + + H AV + S Sbjct: 59 LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A R + + GK I V+ +HL + Q L +W Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + P ++ GDFN + +D F + Sbjct: 161 VNE-LPDGEPVLVEGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + LSDH P+S + Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251 >gi|302766483|ref|XP_002966662.1| hypothetical protein SELMODRAFT_86257 [Selaginella moellendorffii] gi|300166082|gb|EFJ32689.1| hypothetical protein SELMODRAFT_86257 [Selaginella moellendorffii] Length = 334 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 84/332 (25%), Gaps = 52/332 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVK---RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 R+VS+NI SL+ +S + + + +LDAD++ LQE+ + + Sbjct: 1 FRVVSYNILAQVVYVKSSLFPHSPSLCLKWKTRSEQVLSRLLSLDADLLCLQELDEFESF 60 Query: 81 AK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------------------IAVRKK 119 K + + Y + + + Sbjct: 61 YKPLLESRGYSSIYVQRSGKKRDGCGIIYKAKCFSTITTSRLMKPQPEERRNPSVYIHTR 120 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRR-----AVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 V S P S R + + ++ I + +L+ Sbjct: 121 RCIVSDFSVPEEENDRDVSDPRVRFRRNCVGIFSAFRFHHAPSNIVVIANTHLYWDPALQ 180 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS- 233 + L + + I+Q+ S ++AGDFN N + Sbjct: 181 DVKLAQAKYLLAKLLQFEKEISQEFNSNPVVLVAGDFNSTPGDRVYNYITSGRRNSGPDI 240 Query: 234 --------------------LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN--AYKFLI 271 + + N +DY + I Sbjct: 241 ELSSFKVPDLESLKVPAIPLDSLYAAAQGEPAFTNCTPDFTGTLDYIFFSPSASMRPKTI 300 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 E + SDH PI D+ Sbjct: 301 LEVPRPDAPDVKGGLPNHFHPSDHLPIGADFS 332 >gi|218196725|gb|EEC79152.1| hypothetical protein OsI_19821 [Oryza sativa Indica Group] Length = 377 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 46/341 (13%), Positives = 85/341 (24%), Gaps = 48/341 (14%) Query: 9 LVFFLVPCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 L F V T + + RLVS+NI + ++ + + + K+ +A Sbjct: 31 LPFVPVWVTGAAGYQFRLVSYNILAQVYVKSAFFPHSPSACLKWKTRSKAVLSELKSFEA 90 Query: 67 DIVFLQEMGSYNAV-AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN----- 120 D++ +QE+ Y+ K + + Y + V+K+ Sbjct: 91 DLMCIQELDEYDTFYKKNMENSGYSSIYIQRSGDKRDGCGIFYKPKSMELVQKEVLHYND 150 Query: 121 --------------------VRVLQQSYPLLGAKDSFSRAGNR-----RAVELLVEINGK 155 + R + ++N Sbjct: 151 LVEKYVHTDHVNSDTSNNSSPTEEASKKVDNNKHGDPNDPRFRLKRDCVGLLAAFKLNDP 210 Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL-------KDWITQKKESLVPFVIA 208 +L + + + QA++L + I+ K +IA Sbjct: 211 CDHILIMANTHIYW-QVKWPEDPEWIDVKLAQAKYLLSRVTQFEKLISNKFNCKPSVMIA 269 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLI-----RFPKEKDSRCNANKNLRNKIPIDYFVMD 263 GDFN N D D + N +DY + Sbjct: 270 GDFNSTPGDKVYNYLVSANSDSTDEAPIKLRSLYAANGGEPEFTNCTPGFTGTLDYIFLS 329 Query: 264 QNAYKFLIQ--ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + SDH PI D+ Sbjct: 330 DGSSVKPTSLLRIPRGDSAEVQGGLPNFHHPSDHLPIGADF 370 >gi|260827819|ref|XP_002608861.1| hypothetical protein BRAFLDRAFT_102054 [Branchiostoma floridae] gi|229294215|gb|EEN64871.1| hypothetical protein BRAFLDRAFT_102054 [Branchiostoma floridae] Length = 537 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 45/317 (14%), Positives = 81/317 (25%), Gaps = 69/317 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ S+N+ + + VK L Q + ADI+ LQE+ A + Sbjct: 246 LKIASYNVWNFN-----GGPEGRVKAYVERAQHLGQVLADCAADIIALQEV--RFAYNRG 298 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHT---------AIAVRKKNVRVLQQSYPLLGAK 134 P I + T L + + +A+ K + L Sbjct: 299 GPLGPNQIQHFTHYLPGYQYVFQPAMSYPESILGRVEEGVAIISKFPIITHDYILLYRNA 358 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R + +E + L + S Q + + Sbjct: 359 SDSEDFHQRICLHAEIETPYLGLVHLFVTHLSLSEP---------------AQDKSVVQI 403 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + P V+ GD N + + + + + R E+ K + Sbjct: 404 WEFMQRFSGPAVLMGDLNTEPGSKAI-----RFLQGVEEIDRVKTEELQDAWLMKYPEPR 458 Query: 255 I---------------------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 IDY + + L S DD K Sbjct: 459 ADRDGTYWRNEIRDSGLTFNALKSHLEKRIDYMFVRLPSDVRLHNISL------LDDGKR 512 Query: 288 RGKRLSDHCPISIDYDF 304 SDH + + F Sbjct: 513 GYAAASDHVGLMGTFTF 529 >gi|126433169|ref|YP_001068860.1| exodeoxyribonuclease III [Mycobacterium sp. JLS] gi|126232969|gb|ABN96369.1| Exodeoxyribonuclease III [Mycobacterium sp. JLS] Length = 267 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 30/304 (9%), Positives = 68/304 (22%), Gaps = 64/304 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N + + + + D D++ +QE + Sbjct: 1 MRLATWNVN----------------SIRARVDRVTDWLERADVDVLAMQETKCNDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + Sbjct: 41 ------QFPTMPFAALGYDVVHCGFNQWNGVAIASRVGLDDVAVGFDGQPTWCDKPDIEA 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + + V +++ + F+ S Y + L+ Sbjct: 95 AAEARALGATCAGVRVWSLYVPNGRFVGSPHYAYK------LEWLAALRKTAHGWLTENP 148 Query: 204 --PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P + GD+N + I Sbjct: 149 ALPIAMVGDWNIAPTDDDVWSVEAYQDSTHVTPPERQAFTEIVDAGYADVVRPFTPGPGV 208 Query: 247 ANKNLRNK--------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + ID+ + + + +GK SDH P+ Sbjct: 209 YTYWDYTRLAFQKRRGMRIDFILGSPAFADRVTHAEIV-------REERKGKGASDHAPV 261 Query: 299 SIDY 302 +D Sbjct: 262 LVDL 265 >gi|321313648|ref|YP_004205935.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis BSn5] gi|320019922|gb|ADV94908.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis BSn5] Length = 252 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 86/304 (28%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L R Y K DADI+ LQE + + Sbjct: 1 MKLISWNVNGL--------------RAVMRKMDFLSYLKEEDADIICLQETKIQDGQVDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ + ++++ + ++ AV K + + D R Sbjct: 47 QPE-GYHVYWN----------YAVKKGYSGTAVFSKQEPLQVIYGIGVEEHDQEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++V+ ++ + + L L Sbjct: 92 -----VITLEFENVFVMTVYTPNSRRGLERIDYRMQWEEALLSYILELDQ--------KK 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + F A Sbjct: 139 PVILCGDLNVAHQEIDLKNPKANRNNAGFSDQEREAFTRFLEAGFVDSFRHVYPDLEGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ ++ + + S S SDHCP+ Sbjct: 199 SWWSYRAGARDRNIGWRIDYFVVSESLKEQIEDASI-----------SADVMGSDHCPVE 247 Query: 300 IDYD 303 + + Sbjct: 248 LIIN 251 >gi|209551337|ref|YP_002283254.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537093|gb|ACI57028.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 267 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 35/307 (11%), Positives = 76/307 (24%), Gaps = 68/307 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +WNIN ++ Q DI+ LQE N + Sbjct: 3 FSITTWNIN----------------SVRLRMPIVEQLVLKHRPDILCLQETKVTNELFPA 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P + + +A+ + G D+ Sbjct: 47 APL---------RAMGYDHIIIHGQKGYHGVAIASRIPLTEDHRQDYCGVGDARH----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + E ++I + + ++ + D + T +P + + + E+ Sbjct: 93 --ISAIFEHGNRRIRLHNFYVPAG--GDEPDRTINPKFGHKLDFIEEM-KLLKANGEANT 147 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N + D + + + L + Sbjct: 148 SAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETDGLLEVMKRGNWLDLMRQHVPESEKL 207 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + L R SDH P Sbjct: 208 YTWWSYRAKDWEAADRGRRLDHIWSSSDLGPHLK-------RIEILKEARGWDRPSDHVP 260 Query: 298 ISIDYDF 304 ++ +DF Sbjct: 261 VTAHFDF 267 >gi|146337348|ref|YP_001202396.1| putative exodeoxyribonuclease III (xthA) [Bradyrhizobium sp. ORS278] gi|146190154|emb|CAL74146.1| putative exodeoxyribonuclease III (xthA) [Bradyrhizobium sp. ORS278] Length = 271 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 73/306 (23%), Gaps = 64/306 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + L +WNIN L+ ++ K + D++ LQE + Sbjct: 3 LVLTTWNIN----------------SVRLRIDLVAKFIKQVRPDVLCLQE---TKCIDDA 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + RL + + +AV K D +R Sbjct: 44 FPLKRFK------RLGYEHVALNGQKGYHGVAVISKWPFESTHVRTFCDKVD------SR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 E ++ + D + +P Q +K Sbjct: 92 HITVAFGEKAQLAQPLVLHNFYVPAGGDIPDPALNPKFEHKLQFLDEMKACEPLHPRGDD 151 Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N + + + + + Sbjct: 152 RHILVGDLNVAPHEHDVWSHKQLLKVVSHTPIETEKLLAAQSHGEWVDVARERIPMSEKV 211 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + ++ +R SDH P Sbjct: 212 YTWWSYRAADWTVGDRGRRLDHIWVSRALKDR-------VSDFDILRDARSWERPSDHVP 264 Query: 298 ISIDYD 303 +++ D Sbjct: 265 VTVTLD 270 >gi|53726143|ref|YP_103011.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei ATCC 23344] gi|52429566|gb|AAU50159.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia mallei ATCC 23344] Length = 324 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 85/309 (27%), Gaps = 52/309 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM------- 74 +RL+SWN+ + G T D A+ L D D++ QE+ Sbjct: 38 TMRLISWNVQWGRDANG-----------TVDLARTVDAARGLGDFDVLCAQELTRGFHAL 86 Query: 75 ---GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 S + A++ + + A+ + + L Sbjct: 87 PGGPSGDQYAELAALLPGYAVFDAIGVDLPPLEPGAPRRQFGNALATRLPVERALRHALP 146 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + + + R A+E+ + + V+ HL+ + + L ++A Sbjct: 147 WPASAAAPSMPRCALEVTLRAPFGPLRVVVTHLEYYSA--QQRLAQVDALRRLHREAAAH 204 Query: 192 KDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF----- 237 + PF ++ GDFN D + + Sbjct: 205 ARASAPPETPASPFAPSARAADAIVCGDFNSAYRSDAYRRFLAPFPDAPRFVDAWLARHP 264 Query: 238 ---PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 P + + + D+ + + L + R SD Sbjct: 265 GKTPPMTAGVYDTAQWSEGPMTCDFAFVTDTLVRRLSRCEI-----------DGTVRASD 313 Query: 295 HCPISIDYD 303 H PI ++ Sbjct: 314 HQPIVLELS 322 >gi|308446216|ref|XP_003087123.1| hypothetical protein CRE_30356 [Caenorhabditis remanei] gi|308261295|gb|EFP05248.1| hypothetical protein CRE_30356 [Caenorhabditis remanei] Length = 297 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 81/322 (25%), Gaps = 80/322 (24%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 Q +R+ S N+N + + + + + D++ +QE+ + ++ Sbjct: 12 TQTLRVASVNVNGVRA---------------AFRKGMGDWLASRGVDVLAMQEVRADDSH 56 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + W I + N +A+ + V + ++ Sbjct: 57 LAELFGDEWQILHDPC----------NIKGRAGVAIASRVPAVAHRVGLGSAEDQERIQS 106 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R +E E+ G+ + V+ + S + + + Q Sbjct: 107 SGRW-IEADFEVGGELVTVISNYTHSGEVDTPRQEAK-------WAFLDAMGVRLDQLAA 158 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWK-----TIDPNDSLIRFPKEKDSRC---------- 245 I GDFN + + + Sbjct: 159 ERELVTIVGDFNVGHREFDIKNWKGNVKRSGFLPRERAYFDRFFGPRGETVVGVDGSEGV 218 Query: 246 ----------------NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILY 280 N+ IDY V+ + Y Sbjct: 219 GHGWIDVGRRWAGEVDGPYSWWSNRGQAFDNDTGWRIDYHVVTPQLGER-------VENY 271 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 D S +R SDH P+ +DY Sbjct: 272 VIDRAASYDERWSDHAPVVVDY 293 >gi|260772409|ref|ZP_05881325.1| hypothetical protein VIB_000857 [Vibrio metschnikovii CIP 69.14] gi|260611548|gb|EEX36751.1| hypothetical protein VIB_000857 [Vibrio metschnikovii CIP 69.14] Length = 318 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 42/322 (13%), Positives = 101/322 (31%), Gaps = 47/322 (14%) Query: 23 KVRLVSWNI-NTLSEQEGVSLWKN--SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + L + N+ N L + N + ++ + L+AD++ QE+ S+ A Sbjct: 2 TITLATINLFNYLEPPNAFYQFDNIYTNEQWQKKNAWFATKIQQLNADVIGFQEVFSFAA 61 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + + + D H +A+ + + + + + Sbjct: 62 LRQQMNALGYPHVVCV---DSPMIEDDYIYRHPVVALASRYPLTQVSPLQAVLPEQNQAF 118 Query: 140 AGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW---- 194 + +R + +E+ I V +H KS ++ +P+ + Q + L W Sbjct: 119 SFHRIPLHATIEVPKLGAIDVYVVHFKSQRATEA---AQAPNNLVEEWQQETLGRWLSTV 175 Query: 195 -------------ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI----DPNDSLIRF 237 I ++++ PFV+ GDFN+ +++ + + + D L + Sbjct: 176 QRGFEVNLTHQYIIHTRQKTQRPFVLMGDFNKPLHHEEFQGLMSQALYRKPETQDPLSDY 235 Query: 238 PKEKDSRCN----------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD--- 284 +DY ++ + + Y D Sbjct: 236 VFYDSWDIYSEATGQMRQATYYAGATGSVLDYILLSADFSPLSTAPKGNISGYTVLDQHL 295 Query: 285 ---IKSRGKRLSDHCPISIDYD 303 + +DH +++ Sbjct: 296 VNPSFADDSFSTDHALVAVTIT 317 >gi|258516632|ref|YP_003192854.1| Endonuclease/exonuclease/phosphatase [Desulfotomaculum acetoxidans DSM 771] gi|257780337|gb|ACV64231.1| Endonuclease/exonuclease/phosphatase [Desulfotomaculum acetoxidans DSM 771] Length = 236 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 40/280 (14%), Positives = 83/280 (29%), Gaps = 51/280 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + ++++S+NI + + + + K AD+V LQE Y Sbjct: 2 TKPIKILSFNIQSGMGMDN-----------RRSLSRIAWVIKCSGADLVGLQETDKYMKR 50 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + + + K ++ L G Sbjct: 51 SCFSSQARKLARLLGMHYVFGGACKPAFFSRFGNTILSKYPIKGHKNTLLPGTG------ 104 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R +++L+ IN KKI + HL S S +Q + + + + + Sbjct: 105 EQRALLDVLININNKKIRFCNTHLGL-------------STSSRQKQVNKIIELLGEIQ- 150 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 +P ++ GDFN N ++ + K++ + R +DY Sbjct: 151 --LPTILTGDFNTTPNDPVIEQ-LRACLERK---SVSTESKNNDLKTYPSDRPSEKLDYI 204 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + + + SDH P+ Sbjct: 205 FLS------AHWKEICQTTLPG--------QASDHLPLLA 230 >gi|237712922|ref|ZP_04543403.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D1] gi|262409637|ref|ZP_06086177.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 2_1_22] gi|294647118|ref|ZP_06724722.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294807895|ref|ZP_06766676.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|229447041|gb|EEO52832.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D1] gi|262352490|gb|EEZ01590.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 2_1_22] gi|292637535|gb|EFF55949.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294444893|gb|EFG13579.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] Length = 378 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 42/342 (12%), Positives = 88/342 (25%), Gaps = 71/342 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67 R+VSWNI L + SL + + R + + + Sbjct: 43 PFRVVSWNIENLFDTRHDSLKNDHEFLPNAMRHWNYSRYKKKLVDVARVITAIGEWSPPA 102 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 +V L E+ + + + ++ + N I A+ ++ ++L Sbjct: 103 LVGLCEVENDTVLRDLTRRSPLKELSYRYVMTNSPDL---RGIDVALLYQRDLFKLLSSR 159 Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSP-SCSLLS 185 + + R + + + + G + V HL S Y + +L Sbjct: 160 SISIPPLKQY--RPTRDLLHVSGLLLTGDTLDVFVCHLPSRSGGAKESEPYRLYAAHILR 217 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT------------------ 227 + + + SL +I GDFN Sbjct: 218 MEVDSIMN-----IRSLPQVIIMGDFNDYPTNQSIQKILEAEAPPVTTNNLASTTGSTNF 272 Query: 228 -----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK-------------- 268 + K K + K +D+ ++ Sbjct: 273 STVAPSSLKLYHLLARKAKSKDFGSYKYRGEWGLLDHLIVSGTLLNQSNHFFTSEEKANV 332 Query: 269 -------FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + + +SDH PI D++ Sbjct: 333 CLLPFLLKDDEKYGDKEPFRTYKGMKYQGGVSDHLPIYADFE 374 >gi|148271905|ref|YP_001221466.1| hypothetical protein CMM_0726 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829835|emb|CAN00758.1| conserved hypothetical protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 349 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 75/303 (24%), Gaps = 45/303 (14%) Query: 14 VPCTASVAQKV--------RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 + + +++ NI + R L ++ + Sbjct: 68 LAPAPPQEATIGSAEGDLVHVMTCNIRLARPTTEPGDPDHWADREPV----LARFLQLEQ 123 Query: 66 ADIVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 ++ +QE S A+A+ P + + ++ + + Sbjct: 124 PTVLGVQEALSAQLPAIARALPHHRMLGYGRDGGSGGEYSAIFYDERRLDVVAWDQF--- 180 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 P L S+ + R A +G + L+ HL S Sbjct: 181 WLSDLPELIGSRSWGCSTTRIATWARFRDRRSGAEFVHLNTHLDH------------ESE 228 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + A + + + + P V+ GDFN D + D+ Sbjct: 229 LARVKSADLITERLQEVAS-GAPVVVTGDFNAPAEESAAYDILTRDAGLADTWTTAAHHA 287 Query: 242 DSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ + + + G+ SDH Sbjct: 288 TPGIGTFTAYGDPVPEGERIDWILAG---------SGVEVVDSAINPYTFEGRSPSDHAA 338 Query: 298 ISI 300 + Sbjct: 339 VQA 341 >gi|270159123|ref|ZP_06187779.1| endonuclease/exonuclease/phosphatase family protein [Legionella longbeachae D-4968] gi|289166042|ref|YP_003456180.1| hypothetical protein LLO_2719 [Legionella longbeachae NSW150] gi|269987462|gb|EEZ93717.1| endonuclease/exonuclease/phosphatase family protein [Legionella longbeachae D-4968] gi|288859215|emb|CBJ13149.1| putative conserved hypothetical proteins [Legionella longbeachae NSW150] Length = 251 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 41/287 (14%), Positives = 88/287 (30%), Gaps = 50/287 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + L+++NI+ + +R +L+ D VFLQE+ + + Sbjct: 7 SISLITYNIHKGFGVGAIRFL----------LPKMRDAITSLNPDFVFLQEVQGEHIKRQ 56 Query: 83 V------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + I + ++K H A+ K ++ L Sbjct: 57 KRINAWPASPQSEYIAENIWPHYVYAKNAVYQSGHHGNAILSKYAFERFENINLTHI--- 113 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R +R + ++++ I +L +HL F + + Q L I Sbjct: 114 --RRASRGILHAQLKLDNVTIHLLCVHLGLFK-------------AERNVQCNTLMQRIK 158 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 P ++AGDFN + ++ ++ + + + +R + Sbjct: 159 DVVPQDEPLLMAGDFNDW--RTIISKPLADYLNIEEAFVSIEGQH---ARSFPAIRPSLC 213 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID + + + LSDH P+ ++ Sbjct: 214 IDRVYFRGMKVQEVAC-----------LQGKPWRMLSDHLPLYARFE 249 >gi|194292124|ref|YP_002008031.1| endonuclease/exonuclease/phosphatase [Cupriavidus taiwanensis LMG 19424] gi|193226028|emb|CAQ71975.1| putative endonuclease/exonuclease/phosphatase [Cupriavidus taiwanensis LMG 19424] Length = 293 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 35/293 (11%), Positives = 69/293 (23%), Gaps = 59/293 (20%) Query: 13 LVPCTASVAQ---KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 + C + A ++ +VS+NI+ + + LDADIV Sbjct: 29 ALHCPPTRAAGLAQMTVVSYNIHRAVGTDR-----------RYRPQRIAAVLAELDADIV 77 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 LQE+ S ++ + + A+ + Sbjct: 78 ALQEVESGSSNDHTLEFLAGETGMHVVSGFTRVRGTVD----YGNALLTRFAPEAVNQID 133 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS--LLSQQ 187 L R A++ + S C Q Sbjct: 134 LTVKGC-----EPRGAIDA-----------IVTCTASGCANPLRVIATHLGLRPGERRHQ 177 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 Q L +++ +P ++ GD N + + Sbjct: 178 VQQLLNYVAT--APPLPTILLGDVNEWFLWGRPLRWLHAYFE-----------HTPHTAT 224 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +D + A ++ + SDH P+ Sbjct: 225 FPSRLPVFALDRIWVSPRA----------HLVSVASHRSPLARVASDHLPLVA 267 >gi|190346925|gb|EDK39113.2| hypothetical protein PGUG_03211 [Meyerozyma guilliermondii ATCC 6260] Length = 290 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 83/310 (26%), Gaps = 37/310 (11%) Query: 4 KYVLALVFFLVPCTASVAQKV--RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 K+++ L + ASV + + R+ +NI T S V K +R ++ Y Sbjct: 7 KFLVFLFVTSLAWAASVQKPLTFRVYDFNIKTASGNL-VPGEKPWSERKAGVIDSIKNYT 65 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 IV LQE + + + I + Sbjct: 66 SQH-PTIVGLQEALRGQL------DDIMKGLGPEWKFFGVGGSGDTKGEYCPIIYKSNEW 118 Query: 122 RVLQQSYPLLG-----AKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLE 174 ++ + L + R + +G+ I + HL Sbjct: 119 ELVNGTTKWLSETPDKPSRGYGSKYERIVTFAELRHVSSGRTIHYFNTHLDP-------- 170 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI-DPNDS 233 + + + + ++ P + GDFN K + Sbjct: 171 ----HDDHVRYESVRDIITYVN-HTRQGSPVFLGGDFNAKRTSAPYKYVATQMTPASIAP 225 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + K+ N+ + ID+ + Y S +S Sbjct: 226 DPKGVDNKEKSTNSGFQFNHPKTIDFIFFQDH------GSKVKVDSYEILSSTSGNVVIS 279 Query: 294 DHCPISIDYD 303 DH P+ D+ Sbjct: 280 DHSPVIADFS 289 >gi|189237783|ref|XP_976374.2| PREDICTED: similar to 2-phosphodiesterase [Tribolium castaneum] Length = 556 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 39/329 (11%), Positives = 90/329 (27%), Gaps = 46/329 (13%) Query: 14 VPCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 T R VS+NI N ++ E S L+ + ++DI L Sbjct: 233 FTTTQLADNCFRFVSYNILSNRYADNEQFSYCPPQFLAIDYRKQLVAKELSGYNSDIFCL 292 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 QE+ + +F + + ++ + A K + + + Sbjct: 293 QEVD-----QFAYNYYYKNLFKNKNYHSFYYRKGNKIPEGLACFYNKTRFKRVDDHQIIY 347 Query: 132 GAKDSF---SRAGNRRAV--------------------ELLVEINGKKIWVLDIHLKSFC 168 + S+ R + L V + + ++++ + + Sbjct: 348 SQEYSYKKNHYKYLRPIIESNALLKDCFMKQLTSLQVTVLNVNNSNRNVFIIVANTHLYY 407 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 D+ S+ + L + + V ++ GDFN + Sbjct: 408 HPDAELVRVLQ-ISMATTYLSLLHKQYNKD-GNTVRVILCGDFNSVPTSTVYEFLTKGNL 465 Query: 229 DPNDSLIRFPKEK-------------DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 ++ + S N + +DY ++++ + F Sbjct: 466 SRDNKVFEKTVNNVNLRHDFQLQSACGSPTYTNYTDDFRGCLDYIFIEKDKMRVCNVVPF 525 Query: 276 -SEILYNEDDIKSRGKRLSDHCPISIDYD 303 + SDH + +D + Sbjct: 526 PKNEDLEAFEGLPNEVYPSDHLALVVDLE 554 >gi|15924993|ref|NP_372527.1| truncated beta-hemolysin [Staphylococcus aureus subsp. aureus Mu50] gi|156980320|ref|YP_001442579.1| truncated beta-hemplysin [Staphylococcus aureus subsp. aureus Mu3] gi|14247776|dbj|BAB58165.1| truncated beta-hemolysin [Staphylococcus aureus subsp. aureus Mu50] gi|156722455|dbj|BAF78872.1| truncated beta-hemplysin [Staphylococcus aureus subsp. aureus Mu3] Length = 289 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 83/278 (29%), Gaps = 28/278 (10%) Query: 43 WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE------ 96 + N + +D Y K + D+V E A K+ Y T Sbjct: 17 YPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQ 74 Query: 97 --RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 S +A+ K + + F N+ V +E NG Sbjct: 75 SGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNG 133 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNR 213 K + V+ H +S DS + + ++Q + + D++ + I GD N Sbjct: 134 KNVHVIGTHTQS---EDSRCGAGN-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNV 189 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK 268 D K ++ ND L N +DY D++ + Sbjct: 190 N-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQ 248 Query: 269 --FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300 L+ E +E D + SDH PI Sbjct: 249 PKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 286 >gi|308175988|ref|YP_003915394.1| exodeoxyribonuclease III [Arthrobacter arilaitensis Re117] gi|307743451|emb|CBT74423.1| exodeoxyribonuclease III [Arthrobacter arilaitensis Re117] Length = 266 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 36/299 (12%), Positives = 82/299 (27%), Gaps = 55/299 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ +WN+N+L + + + + D D++ +QE N Sbjct: 1 MKIATWNVNSL----------------RARADRVEDWLRRTDVDVLAIQETKCKDDNFPW 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY----PLLGAKDSF 137 ++F N + + + + +A+ + + P G Sbjct: 45 ELFENNDYEVAH------------FGVNQWNGVAIASRVGLENVERTFPGQPEFGKGGKN 92 Query: 138 SRAGNRRA--------VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 R + L NG+ + + K + + Q Sbjct: 93 PIQEPRAIAATCGGVRIWSLYVPNGRALDDEHMGYKLNWLDVLKKESAGWLEENPQAQIA 152 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + DW K V + N + + + + Sbjct: 153 LMGDWNIAPKNEDVWDIDFFVENNLTHVSAPERAAFAAFEDLGFTDVVRPHTEGEYTYWD 212 Query: 250 NLRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + ID+ + +I S D + +GK SDH P+ ++ Sbjct: 213 YTQLRFPKGEGMRIDFSLTSPALTARVIGASI-------DREERKGKGASDHAPVIVEL 264 >gi|291515600|emb|CBK64810.1| Endonuclease/Exonuclease/phosphatase family [Alistipes shahii WAL 8301] Length = 816 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 85/312 (27%), Gaps = 46/312 (14%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE------- 73 + +R++ WNI + + +Y + K D DI E Sbjct: 519 SDNLRVLYWNIQNGMWSDQAN-----------NYNNFVAWVKKYDPDICVWCESATIYKD 567 Query: 74 -MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 S A + F + W + + ++ I + +L+ + Sbjct: 568 NTNSAQASSARFLPDGWAALAARYGHAYTAVGGWRDNYPQTITSKYPIETLLK-----IT 622 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIH-------LKSFCFLDSLENTYSPSCSLLS 185 D + + A V + G+ I ++ +H + Sbjct: 623 DSDQAGKPVSHGAAIQRVTVKGRTINIVTLHTWPQAYGFGVGSADQAASAANKEGDKYRE 682 Query: 186 QQAQWLKD--WITQKKESLVPFVIAGDFNRK---------INYLGNNDDFWKTIDPNDSL 234 + +++ S +++ GDFN + I + +L Sbjct: 683 FEIKYICAQTVNNPAYASCQDWLMMGDFNSRSRADNWYYGYPENDTRLLVHNHILDHTNL 742 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR---GKR 291 E+ + N IDY + Y ++ + Sbjct: 743 KDIIAERYPGSFISSTYGN-ARIDYMYASPSMYARIVNALTVMDKWTTATQSPYVSNFYD 801 Query: 292 LSDHCPISIDYD 303 SDH PI D++ Sbjct: 802 PSDHRPILADFE 813 >gi|223674122|pdb|3G6S|A Chain A, Crystal Structure Of The EndonucleaseEXONUCLEASEPHOSPHATASE (BVU_0621) FROM Bacteroides Vulgatus. Northeast Structural Genomics Consortium Target Bvr56d Length = 267 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 35/288 (12%), Positives = 66/288 (22%), Gaps = 38/288 (13%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 VR ++NI + Q+ ++ W + Q+ K+ + DIV QE+ Sbjct: 3 DVRWATFNIRYDNPQDSLNNW-------QYRKDRVCQFIKDHELDIVGXQEVLHNQFQDL 55 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + + P + Sbjct: 56 RAGLPEYDGIGVGRDDGKTAGEYAPLFYRKDKYEVLDSNTFWLAENPDSVGXXGWDAVCV 115 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R A + ++ F E S L+ ++ + + Sbjct: 116 RIATWAKFKDKATGKIFXAVNTH---FDHVGEEARRQSALLIIRKIKEIV--------GE 164 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-------KI 255 P V+ GDFN D+ + Sbjct: 165 RPAVVTGDFNVTDASDAYETITTNEFVXKDAYKTAARVTGVD---YTFHDFARIPAEDCE 221 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID+ + + LSDH P D + Sbjct: 222 KIDFIFVTPQVLVKSCEIPAEV----------PEALLSDHNPQLADLE 259 >gi|13473590|ref|NP_105158.1| exodeoxyribonuclease III [Mesorhizobium loti MAFF303099] gi|14024340|dbj|BAB50944.1| exodeoxyribonuclease III [Mesorhizobium loti MAFF303099] Length = 268 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 32/309 (10%), Positives = 75/309 (24%), Gaps = 72/309 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80 + +WNIN ++ + D++ LQE + Sbjct: 2 PFSIATWNIN----------------SVRLRMPIVERLLDEYAPDVLCLQETKVPDELFP 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K F + + + +A + + + +DS Sbjct: 46 EKAFRRLGYQYIA-----------FHGQKGYHGVATVARRPIEVVEKRRFCDIEDSRH-- 92 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + + V GK I + + ++ + D + + + I + Sbjct: 93 -----LSVTVRAGGKTILLHNFYVPAG--GDEPDPEINKKFKHKLDFVAEMNA-IRAEHT 144 Query: 201 SLVPFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSR 244 + V+ GD N + + ++ + + + Sbjct: 145 EVSASVLVGDLNIAPLEHDVWSHKQLLNVVSHTPVETENFEAMRLAGNWVDLMRHNVPLD 204 Query: 245 CNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + +D+ N + Y +R SD Sbjct: 205 QKLYTWWSYRAQDWELSNRGRRLDHVWSSPNLVQDFAG-------YEILRAARGWERPSD 257 Query: 295 HCPISIDYD 303 H P+ +D Sbjct: 258 HVPVIARFD 266 >gi|157160265|ref|YP_001457583.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli HS] gi|170020854|ref|YP_001725808.1| endonuclease/exonuclease/phosphatase [Escherichia coli ATCC 8739] gi|188495117|ref|ZP_03002387.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli 53638] gi|194438459|ref|ZP_03070549.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli 101-1] gi|253774207|ref|YP_003037038.1| endonuclease/exonuclease/phosphatase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160867|ref|YP_003043975.1| putative DNase [Escherichia coli B str. REL606] gi|300929408|ref|ZP_07144877.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 187-1] gi|312970864|ref|ZP_07785043.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli 1827-70] gi|157065945|gb|ABV05200.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli HS] gi|169755782|gb|ACA78481.1| Endonuclease/exonuclease/phosphatase [Escherichia coli ATCC 8739] gi|188490316|gb|EDU65419.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli 53638] gi|194422683|gb|EDX38680.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli 101-1] gi|242376582|emb|CAQ31291.1| predicted DNase [Escherichia coli BL21(DE3)] gi|253325251|gb|ACT29853.1| Endonuclease/exonuclease/phosphatase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972768|gb|ACT38439.1| predicted DNase [Escherichia coli B str. REL606] gi|253976988|gb|ACT42658.1| predicted DNase [Escherichia coli BL21(DE3)] gi|300462608|gb|EFK26101.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 187-1] gi|310336625|gb|EFQ01792.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli 1827-70] gi|323963037|gb|EGB58608.1| endonuclease/Exonuclease/phosphatase [Escherichia coli H489] gi|332342122|gb|AEE55456.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 253 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 82/288 (28%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ NI+ LR + + ADIV LQE+ + V Sbjct: 9 SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P + F + + + + + H AV + S Sbjct: 59 LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A R + + GK I V+ +HL + Q L +W Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + P ++AGDFN + +D F + Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + LSDH P+S + Sbjct: 215 LRLDRIYVKNASASAPTALPLQT-----------WRHLSDHAPLSAEI 251 >gi|303232423|ref|ZP_07319115.1| exodeoxyribonuclease III [Atopobium vaginae PB189-T1-4] gi|302481507|gb|EFL44575.1| exodeoxyribonuclease III [Atopobium vaginae PB189-T1-4] Length = 259 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 75/309 (24%), Gaps = 76/309 (24%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 S RL SWN+N L ++L+ DI+ +QE Sbjct: 2 SQKHTYRLASWNVNGLRAVMKKDPNF-------------IDVVQSLNVDIIGIQETKLQE 48 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + +S + ++ AV K + A D+ Sbjct: 49 G-QIALDLPGYTQTWS----------YAERKGYSGTAVFSKEAPLQTIHTIGCSAADNEG 97 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R + + W ++++ + + + L Sbjct: 98 R---------VCALEFNDFWFVNVYTPNSKNELARLDERMEWDEAYRSFLHTL------- 141 Query: 199 KESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDS 243 ++ P + GDFN + + F + Sbjct: 142 -DAKKPVITCGDFNCAHEEIDLKNPATNHQNAGFSDEERASFTKLLNTGFTDTFRAAHPT 200 Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 +A + IDYF++ + +Y SD Sbjct: 201 LTDAYSWWSYRMRSRERNAGWRIDYFLVSDRIKNQVSDARIHADVY-----------GSD 249 Query: 295 HCPISIDYD 303 HCP+ + Sbjct: 250 HCPVGLTIT 258 >gi|291617653|ref|YP_003520395.1| XthA [Pantoea ananatis LMG 20103] gi|291152683|gb|ADD77267.1| XthA [Pantoea ananatis LMG 20103] gi|327394080|dbj|BAK11502.1| exodeoxyribonuclease III XthA [Pantoea ananatis AJ13355] Length = 268 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 79/312 (25%), Gaps = 75/312 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +S+NIN L + L + D++ LQE + Sbjct: 1 MKFISFNINGL----------------RARPHQLEALVEKHQPDVIGLQE---TKVHDDM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ H +A+ K V + D+ R Sbjct: 42 FP-------LEDVAKLGYNVFYHGQKGHYGVALLTKVQPVSVRRGFPGDDDDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + I V++ F + + + L+ +++ + Sbjct: 90 RLIMAEIPSPIGDITVIN-----GYFPQGESRDHPTKFPAKEKFYRDLQSYLSDSLAADK 144 Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241 P +I GD N + + + + Sbjct: 145 PVLIMGDMNISSTDLDIGIGEDSRKRWLRTGKCSFLPEEREWMDRLLSWGLVDTWRAQNP 204 Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + + ID + I+ D ++ Sbjct: 205 EIN-DRFSWFDYRSKGFDDNRGLRIDLLLASTGLASHCIETGI-------DYEIRGMEKP 256 Query: 293 SDHCPISIDYDF 304 SDH P+ + F Sbjct: 257 SDHAPVWSTFHF 268 >gi|160936797|ref|ZP_02084163.1| hypothetical protein CLOBOL_01687 [Clostridium bolteae ATCC BAA-613] gi|158440289|gb|EDP18035.1| hypothetical protein CLOBOL_01687 [Clostridium bolteae ATCC BAA-613] Length = 251 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 77/303 (25%), Gaps = 78/303 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +L+SWN+N L G + + +AD+ +QE Sbjct: 3 KLISWNVNGLRACVGKGF---------------LDFFREAEADVFCIQESKLQEG-QIEL 46 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + +++ + ++ A+ K V + D+ R Sbjct: 47 DLPGYHQYWN----------YARKKGYSGTAMFTKEEPVSVSYGIGMEEHDTEGR----- 91 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ + +V+ + + + + + L++ P Sbjct: 92 ----VITAEFPEYYVVTCYTPNSQDGLARLDYRMKWEDDFLAYLKKLEE--------NKP 139 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 V GD N + + + F Sbjct: 140 VVFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKFTDLLAAGFVDTFRYFYPDLEGTYS 199 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF + ++ L+ S + SDHCP+ + Sbjct: 200 WWSYRFSARAKNAGWRIDYFCVSESLKDRLVSASIHNTV-----------MGSDHCPVEL 248 Query: 301 DYD 303 + Sbjct: 249 VIE 251 >gi|187920658|ref|YP_001889690.1| exodeoxyribonuclease III Xth [Burkholderia phytofirmans PsJN] gi|187719096|gb|ACD20319.1| exodeoxyribonuclease III Xth [Burkholderia phytofirmans PsJN] Length = 270 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 83/303 (27%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NIN S L Q+ + DIV LQE+ + ++ Sbjct: 4 LRIATFNING----------------IRSRLPALLQWLEREAPDIVCLQELKAVDSA--- 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + +A+ K L+ L G +D +R Sbjct: 45 -------FPVEQLRDAGYGAIWQGQSAWNGVAILSKGEAPLESRRGLPGFEDDTH---SR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V ++L + + Y + + + +S Sbjct: 95 YIEAAV-----GGVLVACLYLPNGNPQPGPKFDYKLA------WFDHFIEHAAKLYKSAH 143 Query: 204 PFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNA 247 P V+AGDFN + + + + + D R Sbjct: 144 PVVLAGDFNVVPTDEDIYNPRSWLKDALLQPESRERYQRLLAQGWTDALRTHFGDERVYT 203 Query: 248 NKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + ID+ ++ + L D SDH P + Sbjct: 204 FWDYFRRHWETNSGLRIDHLLLSADLAPRLRDAGV-------DRWVRGEPHASDHAPTWV 256 Query: 301 DYD 303 + + Sbjct: 257 ELE 259 >gi|62290851|ref|YP_222644.1| exodeoxyribonuclease III [Brucella abortus bv. 1 str. 9-941] gi|82700763|ref|YP_415337.1| AP endonuclease [Brucella melitensis biovar Abortus 2308] gi|225853439|ref|YP_002733672.1| exodeoxyribonuclease III [Brucella melitensis ATCC 23457] gi|254690141|ref|ZP_05153395.1| Exodeoxyribonuclease III [Brucella abortus bv. 6 str. 870] gi|254694631|ref|ZP_05156459.1| Exodeoxyribonuclease III [Brucella abortus bv. 3 str. Tulya] gi|254696256|ref|ZP_05158084.1| Exodeoxyribonuclease III [Brucella abortus bv. 2 str. 86/8/59] gi|254707472|ref|ZP_05169300.1| Exodeoxyribonuclease III [Brucella pinnipedialis M163/99/10] gi|254731174|ref|ZP_05189752.1| Exodeoxyribonuclease III [Brucella abortus bv. 4 str. 292] gi|256045604|ref|ZP_05448484.1| Exodeoxyribonuclease III [Brucella melitensis bv. 1 str. Rev.1] gi|256112331|ref|ZP_05453252.1| Exodeoxyribonuclease III [Brucella melitensis bv. 3 str. Ether] gi|256258395|ref|ZP_05463931.1| Exodeoxyribonuclease III [Brucella abortus bv. 9 str. C68] gi|256263081|ref|ZP_05465613.1| exodeoxyribonuclease III [Brucella melitensis bv. 2 str. 63/9] gi|260546115|ref|ZP_05821855.1| exodeoxyribonuclease III [Brucella abortus NCTC 8038] gi|260562912|ref|ZP_05833398.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M] gi|260755677|ref|ZP_05868025.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 6 str. 870] gi|260758902|ref|ZP_05871250.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 4 str. 292] gi|260760626|ref|ZP_05872969.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 2 str. 86/8/59] gi|260884704|ref|ZP_05896318.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 9 str. C68] gi|261214952|ref|ZP_05929233.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 3 str. Tulya] gi|261314960|ref|ZP_05954157.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M163/99/10] gi|265992027|ref|ZP_06104584.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 1 str. Rev.1] gi|265993764|ref|ZP_06106321.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 3 str. Ether] gi|62196983|gb|AAX75283.1| Xth-2, exodeoxyribonuclease III [Brucella abortus bv. 1 str. 9-941] gi|82616864|emb|CAJ11960.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth:Endonuclease/exonuclease/phosphatase family [Brucella melitensis biovar Abortus 2308] gi|225641804|gb|ACO01718.1| exodeoxyribonuclease III [Brucella melitensis ATCC 23457] gi|260096222|gb|EEW80098.1| exodeoxyribonuclease III [Brucella abortus NCTC 8038] gi|260152928|gb|EEW88020.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M] gi|260669220|gb|EEX56160.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 4 str. 292] gi|260671058|gb|EEX57879.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 2 str. 86/8/59] gi|260675785|gb|EEX62606.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 6 str. 870] gi|260874232|gb|EEX81301.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 9 str. C68] gi|260916559|gb|EEX83420.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 3 str. Tulya] gi|261303986|gb|EEY07483.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M163/99/10] gi|262764745|gb|EEZ10666.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 3 str. Ether] gi|263003093|gb|EEZ15386.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 1 str. Rev.1] gi|263092973|gb|EEZ17134.1| exodeoxyribonuclease III [Brucella melitensis bv. 2 str. 63/9] gi|326410001|gb|ADZ67066.1| Exodeoxyribonuclease III [Brucella melitensis M28] gi|326539718|gb|ADZ87933.1| exodeoxyribonuclease III [Brucella melitensis M5-90] Length = 268 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 78/306 (25%), Gaps = 68/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +WNIN L+ Q+ ++ D++ LQE + Sbjct: 3 FSIATWNIN----------------SVRLRMPLVEQFLRDYQPDVLCLQETKCP---DDL 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + S + +A + + D Sbjct: 44 FPAKGFRAL------GYEHIAISGQKGYHGVATVSRRPLDGVEKVDFCNMGDCRH----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +VE +K+ + + ++ + D + +P + + ++ I +K+ Sbjct: 93 --LSAVVEAGDRKLRIHNFYVPAG--GDEPDPEINPKFAHKLAFLEEMRAIIADRKD-GC 147 Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247 ++ GD N N + ++ K + + Sbjct: 148 SSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRIKGGWSDLMRHLIAADQKI 207 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + R SDH P Sbjct: 208 YTWWSYRAKDWDAADRGRRLDHVWGSADLES-------HNKGLQVLRDARGWDRPSDHVP 260 Query: 298 ISIDYD 303 + +D Sbjct: 261 VIATFD 266 >gi|317506931|ref|ZP_07964703.1| exodeoxyribonuclease III [Segniliparus rugosus ATCC BAA-974] gi|316254859|gb|EFV14157.1| exodeoxyribonuclease III [Segniliparus rugosus ATCC BAA-974] Length = 267 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 73/305 (23%), Gaps = 66/305 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WNIN + + + D++ LQE +A Sbjct: 1 MRIATWNIN----------------SIRARVDRAVSWLERSQVDVLALQETKCADA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R ++ + N +A+ + Q Sbjct: 41 ------QFPEEPFREAGYAVAHTGNGQWNGVAIVSRLGLADVQVGFDGQPGFHKDPEAEA 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCF-LDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + + + +++ + D + L QA+ W+ ++ Sbjct: 95 LPEPRAIAATCGGVRIWSLYVPNGRDLADRHYGYKLEWLAALRGQAE---GWLA--ADAD 149 Query: 203 VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + GD+N D F+ + Sbjct: 150 AKIALTGDWNIAPFDEDVWDPSFFDGKTHTSGPERDAFFAF--EKSGFTDVARPHTPGPG 207 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 ID+ + + S D + +GK SDH P Sbjct: 208 VYTYWDYTQLRFPRREGMRIDFVLGSPALAASVTGASV-------DREERKGKGASDHAP 260 Query: 298 ISIDY 302 + ++ Sbjct: 261 VVVEL 265 >gi|218699162|ref|YP_002406791.1| putative metal-dependent hydrolase [Escherichia coli IAI39] gi|218369148|emb|CAR16903.1| putative metal-dependent hydrolase [Escherichia coli IAI39] Length = 253 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 84/288 (29%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ NI+ LR + + ADIV LQE+ + V Sbjct: 9 SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P + F + + + + + H AV + ++ + Sbjct: 59 LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIENYENRDVSVDG-- 116 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A R + + GK I V+ +HL + Q L +W Sbjct: 117 ---AEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + P ++AGDFN + +D F + Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + LSDH P+S + Sbjct: 215 LRLDRIYVKNAS-----------TSAPTALPLRTWRHLSDHAPLSAEI 251 >gi|254825627|ref|ZP_05230628.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL J1-194] gi|254853407|ref|ZP_05242755.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL R2-503] gi|254992839|ref|ZP_05275029.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes FSL J2-064] gi|255519856|ref|ZP_05387093.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes FSL J1-175] gi|300764548|ref|ZP_07074540.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes FSL N1-017] gi|258606777|gb|EEW19385.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL R2-503] gi|293594872|gb|EFG02633.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL J1-194] gi|300514655|gb|EFK41710.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes FSL N1-017] Length = 256 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 76/285 (26%), Gaps = 35/285 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + ++NI K TL + D + ++E + Sbjct: 2 FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEEPLLPQMCD-M 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 W F + ++ + P + + S + R Sbjct: 54 KEMQDWDYFGVGRDDGFEKGEFTAVFYNSTRFTLLQEGHFWLSETPEVPSIHSTAM-FPR 112 Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V + +GK++++ + HL A L Sbjct: 113 ICVWGKFADSDGKQVYIFNTHLDHIS-------------EEARLFASQLLLKKAAIIAEN 159 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---IPIDY 259 P ++ GDFN + N N K D + K + LR + IDY Sbjct: 160 SPVIVLGDFNTQPNTPTYNYITEKYQDAQLISQKPAKGPTGSFHDFHPLRPQNELEKIDY 219 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + F Y + G SDH P++ + D+ Sbjct: 220 IFVSNE---------FKVNTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|52840714|ref|YP_094513.1| endonuclease/exonuclease/phosphatase family protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627825|gb|AAU26566.1| endonuclease/exonuclease/phosphatase family protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 257 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 89/294 (30%), Gaps = 50/294 (17%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + V L+++NI+ V +R L+ D VFLQE+ Sbjct: 6 SMQPEVRSVSLITYNIHKGFGVGAVRFL----------LPEMRDAIAGLNPDFVFLQEVQ 55 Query: 76 --SYNAVAKVFPKN----TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 ++ I + ++K H A+ K +S Sbjct: 56 GKHRKREKRIVSWPDSPQCEYIAENIWPHYVYAKNAVYQSGHHGNAILSKYPFESFESIN 115 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 L +R + ++++ I +L +HL F + ++Q + Sbjct: 116 LSN-----MNRASRGILHTQLKLDNNIIHLLCVHLGLFK-------------AERTEQCK 157 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L I P ++AGDFN + + + + ++ + + + Sbjct: 158 ALIQRIKDVVPKNEPLIMAGDFNDWRHV--ISKILAENLGIEEAFVALEGQH---ARSFP 212 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + +D + + + LSDH P+ ++ Sbjct: 213 AIKPALCVDRVYFRGMKVQEVAC-----------LQGKPWRMLSDHLPLYARFE 255 >gi|60280047|gb|AAX16387.1| unknown [uncultured murine large bowel bacterium BAC 31B] Length = 335 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 40/341 (11%), Positives = 91/341 (26%), Gaps = 57/341 (16%) Query: 1 MIRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKN-----------S 46 M + VL + V + + + +N+ L + + + + Sbjct: 1 MRKILVLCSFWLCVATLGAQNAERNLYSVAFYNLENLFDTVHDAGKNDNEFLPDGSYRWT 60 Query: 47 VKRTTSDYTLLRQYAKNLDADI-------VFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99 VK+ S L + +L D+ + + E+ + + + + + Sbjct: 61 VKKYESKLQNLSKVLGSLSRDLVPEGPAFIGVAEVENSRVLEDLVKQPAISNYEFVHYEG 120 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 I A+ K V L + + R + + ++ G+++ V Sbjct: 121 P-----DRRGIDCALLYDPKQFSVTHSKLVLSTPFEGDTVHLTRGFLIVDGQLAGERVCV 175 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 + H S SP ++Q + LKD + + + + ++ GD N Sbjct: 176 IVNHWPSR-------GAKSPVRVHAARQVKALKDSLMR-SDKKLKLIVMGDMNDDPMDES 227 Query: 220 N-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 + + +D D V+ + K Sbjct: 228 MEVLGARKYPKQVKKGEFYNPWWVTLEDKGVGTLLYRGKWNLFDQIVISKPLLKAKKGLR 287 Query: 275 FSEI------------------LYNEDDIKSRGKRLSDHCP 297 ++ + SDH P Sbjct: 288 YTHNEVFIRDYLIQQDGKYKGAPLRTHGGGAWLNGYSDHLP 328 >gi|317503938|ref|ZP_07961946.1| exodeoxyribonuclease III [Prevotella salivae DSM 15606] gi|315664964|gb|EFV04623.1| exodeoxyribonuclease III [Prevotella salivae DSM 15606] Length = 250 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 83/303 (27%), Gaps = 77/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L G Q ++L+AD LQE A Sbjct: 1 MKFISWNVNGLRACVGKDF---------------SQSFESLNADFFCLQETK-MQAGQLE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ + + + D R Sbjct: 45 LQFPGYTSYWNYAEKKGY----------SGTAIYTRKEPLAVSYGIGIDEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + K +++ ++ + + ++ Q ++ Sbjct: 91 -----VITLEYDKFFLVTVYTPN-------AQEELRRLDYRMTWEDAFQAYLHQ-LDAKK 137 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N + + + + + Sbjct: 138 PVIVCGDMNVAHQEIDLKNPKTNRRSAGFTDEERSKMTQLLSNGFTDTFRTLHPEQITYS 197 Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + R + IDYF++ L S +Y SDHCP+ + Sbjct: 198 YWSYRFRAREKNAGWRIDYFLISDRLRPQLKGASIHTEIY-----------GSDHCPVEL 246 Query: 301 DYD 303 D D Sbjct: 247 DID 249 >gi|285817689|gb|ADC38176.1| truncated beta-hemolysin [Staphylococcus aureus 04-02981] Length = 289 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 82/278 (29%), Gaps = 28/278 (10%) Query: 43 WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE------ 96 + N + +D Y K + D+V E A K+ Y T Sbjct: 17 YPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQ 74 Query: 97 --RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 S +A+ K + + F N+ V +E NG Sbjct: 75 SGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNG 133 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNR 213 K I V+ H +S DS + ++Q + + D++ + I GD N Sbjct: 134 KNIHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNV 189 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK 268 D K ++ ND L N +DY D++ + Sbjct: 190 N-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQ 248 Query: 269 --FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300 L+ E +E D + SDH PI Sbjct: 249 PKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 286 >gi|213156292|ref|YP_002318712.1| endonuclease/exonuclease/phosphatase [Acinetobacter baumannii AB0057] gi|213055452|gb|ACJ40354.1| endonuclease/exonuclease/phosphatase [Acinetobacter baumannii AB0057] Length = 783 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 49/325 (15%), Positives = 99/325 (30%), Gaps = 50/325 (15%) Query: 21 AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSY 77 A +R+ S+N+ N + G + + + D + K++DAD+ L E+ + Sbjct: 432 ANHIRVASFNVLNYDNGATGFPTERGANTQAEFDKQHHKIVSALKSIDADVYGLMEIANN 491 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + R N+ I AI K V+ L ++ L Sbjct: 492 GYGPNSAIAHLTSALGPDWKYVIPENLDRLGNDVIAVAIIYNSKRVKPLNKAVVLDLGD- 550 Query: 136 SFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFL-------DSLENTYSP-SCSLLS 185 NR + + K V+ HLKS D+ +N Sbjct: 551 -----KNRTTLAQTFQAVRGNKIFTVIPNHLKSKGCSGVDASSSDADQNDGQGCWNPTRV 605 Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + + W+ + ++ GD N ++ + L + + Sbjct: 606 KAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAPI--LAFEKANYKVLLNDAKVGQGA 663 Query: 244 RCNANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289 + + +D+ + D + Y +++ I +E + Sbjct: 664 QAYSYVFGVASDANGNGGVGNLDHAIADADLYPKVVRTFAWHINADEPMVLDYNEEYKTD 723 Query: 290 -----------KRLSDHCPISIDYD 303 R SDH P+ +D D Sbjct: 724 EQKALFYGEDAYRSSDHDPVIVDLD 748 >gi|161619921|ref|YP_001593808.1| exodeoxyribonuclease III (xth) [Brucella canis ATCC 23365] gi|254705010|ref|ZP_05166838.1| exodeoxyribonuclease III [Brucella suis bv. 3 str. 686] gi|260567518|ref|ZP_05837988.1| exodeoxyribonuclease III [Brucella suis bv. 4 str. 40] gi|261755709|ref|ZP_05999418.1| exodeoxyribonuclease III Xth [Brucella suis bv. 3 str. 686] gi|161336732|gb|ABX63037.1| exodeoxyribonuclease III (xth) [Brucella canis ATCC 23365] gi|260157036|gb|EEW92116.1| exodeoxyribonuclease III [Brucella suis bv. 4 str. 40] gi|261745462|gb|EEY33388.1| exodeoxyribonuclease III Xth [Brucella suis bv. 3 str. 686] Length = 268 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 79/306 (25%), Gaps = 68/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +WNIN L+ Q+ ++ D++ LQE + Sbjct: 3 FSIATWNIN----------------SVRLRMPLVEQFLRDYQPDVLCLQETKCP---DDL 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + S + +A + + D Sbjct: 44 FPAKGFRAL------GYEHIAISGQKGYHGVATVSRRPLDGVEKVDFCNMGDCRH----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +VE +K+ + + ++ + D + +P + + ++ I +K+ Sbjct: 93 --LSAVVEAGDRKLRIHNFYVPAG--GDEPDPEINPKFAHKLAFLEEMRAIIADRKD-GC 147 Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247 ++ GD N N + ++ K + + Sbjct: 148 SSLLIGDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRIKGGWSDLMRHLIAADQKI 207 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + R SDH P Sbjct: 208 YTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG-------LQVLRDARGWDRPSDHVP 260 Query: 298 ISIDYD 303 + +D Sbjct: 261 VIATFD 266 >gi|299145012|ref|ZP_07038080.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] gi|298515503|gb|EFI39384.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] Length = 277 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 37/280 (13%), Positives = 70/280 (25%), Gaps = 43/280 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 V+++S+NI + Q K ++ D+ LQE + + Sbjct: 38 VKVMSYNI----------YSGQKAYSGKKGMEAIAQVIKKINPDLAGLQEFETKTNKVEK 87 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + K + + K + +Y L + + R Sbjct: 88 ADIIALMKEVTGMPYAFFVKTRDVDGGEYGNLILSKYPISDEVNYDLPRIE-TVEDVYPR 146 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + E +GK + HL + Q + I + K Sbjct: 147 SMGVVKTEKDGKGFYFGVTHLSHVGNETN-----------RINQTTTI---IEKTKGLDK 192 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 P ++ GDFN + K + + ID+ + Sbjct: 193 PMILTGDFNALADSGP-----MKILYERFEIGCLNGNYGLTTGT---PVPVKAIDFVLYT 244 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + Y E SDH P+ + Sbjct: 245 PDDGMSPKAYDVYYDAYVE----------SDHFPVVATFS 274 >gi|108797547|ref|YP_637744.1| exodeoxyribonuclease III [Mycobacterium sp. MCS] gi|119866633|ref|YP_936585.1| exodeoxyribonuclease III [Mycobacterium sp. KMS] gi|108767966|gb|ABG06688.1| Exodeoxyribonuclease III [Mycobacterium sp. MCS] gi|119692722|gb|ABL89795.1| Exodeoxyribonuclease III [Mycobacterium sp. KMS] Length = 267 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 30/304 (9%), Positives = 68/304 (22%), Gaps = 64/304 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N + + + + D D++ +QE + Sbjct: 1 MRLATWNVN----------------SIRARVDRVTDWLERADVDVLAMQETKCNDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + Sbjct: 41 ------QFPTMPFAALGYDVVHCGFNQWNGVAIASRVGLDDVAVGFDGQPTWGDKPDIEA 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + + V +++ + F+ S Y + L+ Sbjct: 95 AAEARALGATCAGVRVWSLYVPNGRFVGSPHYAYK------LEWLAALRKTAHGWLTENP 148 Query: 204 --PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P + GD+N + I Sbjct: 149 ALPIAMVGDWNIAPTDDDVWSVEAYQDSTHVTPPERQAFTEIVDAGYADVVRPFTPGPGV 208 Query: 247 ANKNLRNK--------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + ID+ + + + +GK SDH P+ Sbjct: 209 YTYWDYTRLAFQKRRGMRIDFILGSPAFADRVTHAEIV-------REERKGKGASDHAPV 261 Query: 299 SIDY 302 +D Sbjct: 262 LVDL 265 >gi|239931999|ref|ZP_04688952.1| large secreted protein [Streptomyces ghanaensis ATCC 14672] gi|291440368|ref|ZP_06579758.1| large secreted protein [Streptomyces ghanaensis ATCC 14672] gi|291343263|gb|EFE70219.1| large secreted protein [Streptomyces ghanaensis ATCC 14672] Length = 609 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 37/327 (11%), Positives = 84/327 (25%), Gaps = 66/327 (20%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78 A ++ + ++N+ L + + + + ++ DIV L+E+ N Sbjct: 302 AGELSVATYNVENLDPSDDTFA---------AHAAAIVDHLRS--PDIVALEEVQDDNGA 350 Query: 79 ----------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + + S + + + +I + V Sbjct: 351 VDDATVTAGVTVTRLIDAVEAAGGPRYDW-RSVDPVDKADGGEPGGNIRQVFLFDPERVS 409 Query: 123 VLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 ++ P S + +R+ + G+ + V+ Sbjct: 410 FTDRAGGDATTAVGVTKVRGKAALTVSPGRVDPASAAFENSRKPLAGEFVFRGRTVIVIA 469 Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKI 215 H S SL + Y P S + QA+ + D+ + V GD N Sbjct: 470 NHFASKGGDQSLTSQYQPPSRGSETQRHLQAKAVHDFTAKILTTQKNAAVVALGDINDFE 529 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + N +D ++ + + Sbjct: 530 FSRTTEI----LEGDGTLWSAIKSLPPGERYSYVYQGNSQVLDQILISPSIRRGGTFS-- 583 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 + ++SDH P + + Sbjct: 584 ---YDSVHLNAEFHDQISDHDPQVLRF 607 >gi|152982053|ref|YP_001352165.1| hypothetical protein mma_0475 [Janthinobacterium sp. Marseille] gi|151282130|gb|ABR90540.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 328 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 95/317 (29%), Gaps = 39/317 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSV---KRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 Q++R ++N+ L+ + + + + Q LDAD++ LQE+ S Sbjct: 3 QELRFATFNVCNLALPGTKYYEDQIPYSAEEYDAKISWIAQQLDRLDADVIGLQEIFSQQ 62 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL---------QQSYP 129 A+ V K + + + + + + ++A+ + + Sbjct: 63 ALTDVLAKTQKYR---DAQQLGYDPDPAADHLTPSVALISRLPVLAGATVFRELPHHLSI 119 Query: 130 LLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFL----------DSLENTYS 178 L R + ++ NG + V HLKS D Sbjct: 120 TLPGVAHPVTHFTRPILHAQIQAANGLAVDVFVCHLKSKLPDYRNDLEDELPDQTGIAML 179 Query: 179 PSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLG----------NNDDFWKT 227 S A L+ ++ K+ P V+ GDFN + + + Sbjct: 180 RSLIRRGTDALGLRHLLSDIKQLQRKPIVVMGDFNDVADAIPTQMVMGLGKYPLNGVDDR 239 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL--YNEDDI 285 + + + + + + ID+ ++ + I Y D + Sbjct: 240 LFESYRIQSRRDVLRDVGYTHIHDNSYETIDHILVSEEFNPGSPGALGEVIEVMYLNDHM 299 Query: 286 KSRGKRLSDHCPISIDY 302 R SDH + Sbjct: 300 TFRQAYASDHGLVLARI 316 >gi|148271891|ref|YP_001221452.1| hypothetical protein CMM_0712 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829821|emb|CAN00742.1| conserved hypothetical protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 276 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 41/300 (13%), Positives = 93/300 (31%), Gaps = 37/300 (12%) Query: 9 LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 +V + + L+S N+ + +R L ++ + + Sbjct: 1 MVVMTPAIGPTTGDDIHLISLNVRMPWHGTREGEADHWPERQEV----LTRFLQQERPTV 56 Query: 69 VFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 + +QE + K P ++ + +H + + + + + + +V L Sbjct: 57 LGVQEALWPQIQTIEKALP-PSYRMIGQGREGGSHGEHGAIFYQASRLTLLEHDVMWL-S 114 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 P + ++ R + G + VLD HL + + + Sbjct: 115 DTPDVIGSMTWGNPMPRILTWARFQDEATGHPLVVLDTHLDHDVAEARDRAAEAIAELVR 174 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 ++ A +P V+ GDFN ++ D + DS + ++ Sbjct: 175 TRFA-------------GLPLVLIGDFNAPVDS-FPYDALTRRAGLRDSWLDTARQATPA 220 Query: 245 CNANKNLRNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + R + ID+ ++ +D RG+ +SDH P+ Sbjct: 221 FGTFPDYRPPVVDGPRIDWILVSDR---------VDVRAAAVNDFAWRGRMMSDHLPVQA 271 >gi|159037690|ref|YP_001536943.1| sphingomyelin phosphodiesterase [Salinispora arenicola CNS-205] gi|157916525|gb|ABV97952.1| Sphingomyelin phosphodiesterase [Salinispora arenicola CNS-205] Length = 318 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 101/318 (31%), Gaps = 36/318 (11%) Query: 6 VLALVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 VLA + A+ A +++++ N+ L SL+ N + T SD Y Sbjct: 12 VLAATGLVASTGAAQAAPAPLKVLTHNVMLLP----QSLYPNWGQVTRSDLISEADYITG 67 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIA 115 DIV LQEM A ++ + Y T L + Sbjct: 68 R--DIVVLQEMFDNEASNRLKDRLAAQYPYQTPVLGRSRSGWDATMGAYSNVTPEDGGVT 125 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + K + + Y + + N+ V +++NG + V+ H ++ D+ Sbjct: 126 ILSKWPILEKIQYVYADGCGADWFS-NKGFVYARLDVNGAPLHVVGTHAQA---ADTGCA 181 Query: 176 TYSPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + + + + Q L+ ++ + + +I GD N + + S Sbjct: 182 DGTGAG-VRAAQFDELRAFLDARLIPTGEQVIITGDLNVDRYSAEYAGMLTRLDVSDTSF 240 Query: 235 IRFPKEKDSRCN----ANKNLRNKIPIDYFV--------MDQNAYKFLIQESFSEILYNE 282 P DS N N + ++ +DY + + + + Sbjct: 241 TGHPYSWDSARNAMADYNDDRNSRQQLDYVMQRNGHARHGSGDNQTLAVNAPKWCVTSWF 300 Query: 283 DDIKSRGKRLSDHCPISI 300 DH P++ Sbjct: 301 VRYCYTDYA--DHYPVAA 316 >gi|169624612|ref|XP_001805711.1| hypothetical protein SNOG_15565 [Phaeosphaeria nodorum SN15] gi|111055820|gb|EAT76940.1| hypothetical protein SNOG_15565 [Phaeosphaeria nodorum SN15] Length = 438 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 39/316 (12%), Positives = 98/316 (31%), Gaps = 37/316 (11%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M +L+L F + + + +++N+ L + T+ + + Sbjct: 1 MRASLLLSLPFVGIALAQTSGK-FTTITFNVAGLPPVLNGNEIPGDKTTNTA---RIGEL 56 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + +V +QE +++A K+ + S +N +TA Sbjct: 57 LTQYNISLVHVQEDFNFHATLYANDKHPYRTPTSGGVPFGSGLNSLSNFPYTAF------ 110 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSP 179 + + DS + + +++ G ++H + + Sbjct: 111 ---ERVKWGTCSTFDSADCLTPKGFTFMRLQVAPGVSFDAYNLHADAGT--------TAA 159 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-----------DDFWKTI 228 + + + D+I V+ GD N + ++ D W + Sbjct: 160 DLKARAANLRQVSDYIKAN-SQGNAVVVFGDTNTRYTRGPDDIPGIFAQENGMKDVWVEL 218 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 N + + C+ +D ++ + SF + +++ Sbjct: 219 AKNG-VPPAGGAEALLCDNPSKSTACETVDKVFYRGSSAVTIQANSFD--YAGDMFLQAD 275 Query: 289 GKRLSDHCPISIDYDF 304 G LSDH P+ +++ + Sbjct: 276 GSILSDHNPVLVEFAW 291 >gi|240168902|ref|ZP_04747561.1| putative exodeoxyribonuclease III protein [Mycobacterium kansasii ATCC 12478] Length = 276 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 68/306 (22%), Gaps = 66/306 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +RL +WN+N + + + D D++ +QE + Sbjct: 4 GTLRLATWNVN----------------SIRTRLDRVLDWIARADVDVLAMQETKCADG-- 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + D +A+ + Q S Sbjct: 46 --------QFPALPLFELGYEVAHVGFDQWNGVAIASRVGIDDVQVGFDGQPTWSRKPEV 97 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 A + + V +++ + L TY LKD Sbjct: 98 AATAEARALGATCGGVRVWSLYVPNGRALGDPHYTYKLD------WLAALKDTAEGWLRD 151 Query: 202 L--VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSR 244 +AGD+N + I Sbjct: 152 DPAAAIALAGDWNIAPTDDDVWSTEFYAGATHVSEPERKAFNAIVDAQFADLVRPFAPGP 211 Query: 245 CNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 ID+ + + ++ + +GK SDH Sbjct: 212 -GVYTYWDYTQLRFPKRQGMRIDFILGSPALARRVVDAQIV-------REERKGKAPSDH 263 Query: 296 CPISID 301 P+ +D Sbjct: 264 APVFVD 269 >gi|254831846|ref|ZP_05236501.1| hypothetical protein Lmon1_10855 [Listeria monocytogenes 10403S] Length = 256 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 78/285 (27%), Gaps = 35/285 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + ++NI K TL + D + ++E + Sbjct: 2 FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEEPLLPQMLDMK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + W F + ++ + P + + S + R Sbjct: 55 AMLD-WDYFGVGRDDGFEKGEFTAVFYNSTRFTLLQEGHFWLSETPDVPSIHSTAM-FPR 112 Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V +++GK+ ++ + HL A L Sbjct: 113 ICVWGKFADLDGKQFYIFNTHLDHIS-------------EEARLFASQLLLKKAATIAEN 159 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDY 259 P +I GDFN + + N K D + K + + LR IDY Sbjct: 160 SPVIILGDFNTEPDTPTYNFITKKYQDAQLISQKRAKGPIGSFHDFRPLRPINELEKIDY 219 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + F Y + G SDH P++ + D+ Sbjct: 220 IFVSKE---------FQVCTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|71418503|ref|XP_810873.1| RNA-editing complex protein MP100 [Trypanosoma cruzi strain CL Brener] gi|70875471|gb|EAN89022.1| RNA-editing complex protein MP100, putative [Trypanosoma cruzi] Length = 922 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 38/293 (12%), Positives = 82/293 (27%), Gaps = 34/293 (11%) Query: 23 KVRLVSWNINTLSEQEGVSL--WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++L++WN+ + + Y +L + + DAD+V +QE+ Sbjct: 647 TLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPKRYPVLARVIQQEDADVVGMQEVE----- 701 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + F S + + + S +I+ + V ++ +P+ A Sbjct: 702 ------PVFWEFLSKQPWMRENYYFSCGYTSPSISPWGVLMLVHRRRFPVQSITYLNVPA 755 Query: 141 GNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 + +++ + V HL + S +L + L Sbjct: 756 WTNHVSLMPVVCLQLPHGPVHVAAAHLLAPYTKSHETARTSQDSALRHHMLKTL------ 809 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS-LIRFPKEKDSRCNANKNLR---- 252 V GDFN + +D + N L+ Sbjct: 810 ----TGDVVTMGDFNDWPTNEFLMPAESQYVDCWPLIYPHDAGKTMDETNTFCKLKVEEM 865 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---LSDHCPISIDY 302 D + + N+++ SDH +S+ + Sbjct: 866 FFGRSDKLFLRSRRLAPVEGHLVGTKSVNDENGNKDAPGYLFPSDHYGVSMTF 918 >gi|171910959|ref|ZP_02926429.1| hypothetical protein VspiD_07285 [Verrucomicrobium spinosum DSM 4136] Length = 300 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 34/287 (11%), Positives = 84/287 (29%), Gaps = 50/287 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+R+V+WN+ L + + + L DIV QE A+ Sbjct: 53 KLRVVTWNVWGL---------HWITPLRSERLRKVAEEVARLKPDIVGFQEAFVEADRAE 103 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS-----F 137 + HS+ + + + + + + + + Sbjct: 104 LTQALQVVGLE-------HSRYFHSGLVGSGLLMVSRYPVLAEGFIRYASNGRPEALQHG 156 Query: 138 SRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + +++ G+++ + HL + + + Q L W+ Sbjct: 157 DWWAGKGLSLCTLDLGEGRRLSFGNTHLHAR-------YKENRYHATQLAQTAQLIPWVK 209 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + +E+ P + GD+N + D ++ + + Sbjct: 210 KVRETGAPALWTGDWNNTPD----GDVLSPLMEAGAWKLLSTDQP--------------R 251 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D+ +++ + + E D SDH + +D + Sbjct: 252 VDHVFGSGEGWEWQVVDQGKVNGKLESDPTVPW---SDHAAVWVDVE 295 >gi|323976824|gb|EGB71912.1| endonuclease/Exonuclease/phosphatase [Escherichia coli TW10509] Length = 253 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 82/288 (28%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ NI+ LR + + ADIV LQE+ + V Sbjct: 9 SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P + F + + + + + H AV + S Sbjct: 59 LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A R + + GK I V+ +HL + Q L +W Sbjct: 114 IDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + P ++AGDFN + +D F + Sbjct: 161 VNE-LPDGEPILVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + LSDH P+S + Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251 >gi|311746546|ref|ZP_07720331.1| endonuclease/exonuclease/phosphatase family protein [Algoriphagus sp. PR1] gi|311302536|gb|EAZ79778.2| endonuclease/exonuclease/phosphatase family protein [Algoriphagus sp. PR1] Length = 348 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 82/312 (26%), Gaps = 50/312 (16%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 Y AL+ F A+ ++++++N + + + + + ++ Sbjct: 69 YKFALITFQWHDKNENAKGLKVLTYNAHNFFYKSNNEGKFDP---------NVYTWLQDH 119 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 ADI QE + + +A+ K + Sbjct: 120 PADIKVFQEFY-QDFTTTSRNSIKLLGEDMGFESSYQVIEGNPQKRSLGLAIFSKYSIIQ 178 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + F + G A+ + +N I + + HL+S +DS Sbjct: 179 EGKV--------FDKNGTNGAIFADILVNQDTIRIYNAHLES-MRIDSEGLENIEGVKEN 229 Query: 185 SQQA------------QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 +Q + L + + S P ++ GD N + Sbjct: 230 YRQTLGKLHRGSLERSKQLSLLVEHIQNSPHPIILMGDLNEVPYSYTYFKL------SEN 283 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 F + + ID+ I + Sbjct: 284 LENAFELMGRGFGFTYNRILIFLRIDHIFASPQLKP---------IQFKTHREVDY---- 330 Query: 293 SDHCPISIDYDF 304 SDH P+S + + Sbjct: 331 SDHYPVSATFTW 342 >gi|311032597|ref|ZP_07710687.1| hypothetical protein Bm3-1_19034 [Bacillus sp. m3-13] Length = 294 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 31/285 (10%), Positives = 72/285 (25%), Gaps = 35/285 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNA 79 ++S+N+ + + S + D++ QE + Sbjct: 3 HTYTVMSFNLRVIVASDPFS--------WDDRKHWIADTINTYTPDVIGTQEATIPMLEW 54 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + F + ++ ++ S + + + + P + + Sbjct: 55 LKETFEE-SYEVYAVNRTESTEVGEFSAVFVKKSRFIIGSKGSFMLAETPDIIGTMGWDA 113 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + + + VL + L+ + + Sbjct: 114 HCERICSWVELIPKRQTEPVLRFFNTHL--DHMGKLARKEGLKLICDVIR------RKDN 165 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS---RCNANKNLRNKIP 256 E +P ++ GDFN + + F +E+ +A + P Sbjct: 166 EQSLPVILTGDFNDAPES----EALAEVSSMKSCYSCFTEEEKENSLTFHAYEGGTKGSP 221 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + G SDH P+ Sbjct: 222 IDYIFGSN---------GVEFLTARILRDSFNGGYPSDHYPVLAT 257 >gi|121602111|ref|YP_988433.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583] gi|120614288|gb|ABM44889.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583] Length = 271 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 33/307 (10%), Positives = 85/307 (27%), Gaps = 68/307 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 R+ +WNIN + + +Y + DI+ LQE + + Sbjct: 3 FRIATWNIN----------------SIRFRFEQVLRYLELCAPDILCLQE---TKCLDNL 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + + +A+ + V + K F + Sbjct: 44 FPREVFLSAGYKH------IALNGQKAYHGVAILSRLPFVSVE-------KRFFCQKEEC 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + ++V+ + I + + ++ + D + + + + I + + Sbjct: 91 RYLSVVVKPYQQAIRIHNFYVPAG--GDEPDVQVNEKFRHKLDFLEEMSS-IRADQGDGL 147 Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247 ++ GD N + + ++ + + + Sbjct: 148 SSLLMGDLNIAPLEDDVWSHKQLLNVVSHTPIETERLKALCHEGGWVDLMRMKFPVPIKL 207 Query: 248 NKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + F+ S + SDH P Sbjct: 208 YTWWSYRARDWALADRGRRLDHIWSSPDLAPFVEDLSI-------FREARGWSKPSDHVP 260 Query: 298 ISIDYDF 304 + ++F Sbjct: 261 VQSVFNF 267 >gi|330987661|gb|EGH85764.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 380 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 45/325 (13%), Positives = 95/325 (29%), Gaps = 68/325 (20%) Query: 21 AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 Q +++++WNI L+ + + + + + ++ DIV Sbjct: 69 GQALKVMTWNIQFLAGKRYVFWCDMADGSGPDERPTHEDLAYNLDEAARVIRDEQPDIVL 128 Query: 71 LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 LQ + VA ++P +T ++ +E + N S A Sbjct: 129 LQGVDDGAKNSDYEDQLALIKERVADLYPCSTQAFYWKSEFVPNPHIWGS-VGRKLATLS 187 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174 R + P+ A + + A+ + +G K+ V++ L + Sbjct: 188 RFHIDSAERVQLPVPDANIISRQFQPKDALLVSYLPLRDGGKLAVINTSLTTARHTGD-- 245 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI------ 228 +Q + + + + P++I GDFN + + Sbjct: 246 --------TAQKQVAATEKQLDKLESGGTPWLIGGDFNLLPLGQYQRLPEEQRLGYAADS 297 Query: 229 ---DPNDSLIRFPKEKDS----RCNANKNLRNKIPI-------DYFVMDQNAYKFLIQES 274 + + P +S R + N I DY + + S Sbjct: 298 ELHELWEKYPMIPDNAESSGIDRGKWLTHFPNDSRINGPDRTVDYLFYSPSLKR----VS 353 Query: 275 FSEILYNEDDIKSRGKRLSDHCPIS 299 + +SDH P+ Sbjct: 354 ARVRRDDTLL-------ISDHLPVI 371 >gi|328956310|ref|YP_004373643.1| exodeoxyribonuclease III Xth [Coriobacterium glomerans PW2] gi|328456634|gb|AEB07828.1| exodeoxyribonuclease III Xth [Coriobacterium glomerans PW2] Length = 283 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 81/302 (26%), Gaps = 64/302 (21%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 R SWN+N L + + D++ + +L+ADI+ +QE Sbjct: 20 RFASWNVNGLRA----------LMKKEPDFSEIA---ASLNADILAIQETKLQEG-QIDL 65 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + +S +S + ++ +L + Sbjct: 66 DLAGYHQTWSYAARKGYSGTAVFSREQ---------PIRTLRADAMLDVVEGGELLEPAI 116 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + + ++ W D++ + + + L+ P Sbjct: 117 REGRVCALEFERFWFADVYTPNSQDGLARLPVRLAWDEAYRAFLKQLERM------GDKP 170 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 V GDFN N + + F +A Sbjct: 171 VVTCGDFNVAHNEIDLRNPKSNRGNAGFSDEERASFSRLLEAGFTDTFRYLYPDVRDAYS 230 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF++ + +++ + + ++ SDHCP+ + Sbjct: 231 WWSYRFHARRTNAGWRIDYFLVSDSVRDRIVEATIRQDVF-----------GSDHCPVEL 279 Query: 301 DY 302 Sbjct: 280 VI 281 >gi|256370404|ref|YP_003107915.1| exodeoxyribonuclease III [Brucella microti CCM 4915] gi|256000567|gb|ACU48966.1| exodeoxyribonuclease III [Brucella microti CCM 4915] Length = 268 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 33/306 (10%), Positives = 79/306 (25%), Gaps = 68/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +WNIN L+ Q+ ++ D++ LQE + Sbjct: 3 FSIATWNIN----------------SVRLRMPLVEQFLRDYQPDVLCLQETKCP---DDL 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + S + +A + + D Sbjct: 44 FPAKGFRAL------GYEHIAISGQKGYHGVATVSRRPLDGVEKVDFCNMGDCRH----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +VE +K+ + + ++ + D + +P + + ++ I +K+ Sbjct: 93 --LSAVVEAGDRKLRIHNFYVPAG--GDEPDPEINPKFAHKLAFLEEMRAIIADRKD-GC 147 Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247 ++ GD N N + ++ K + + Sbjct: 148 SSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRIKGGWSDLMRHLIAADQKI 207 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + R SDH P Sbjct: 208 YTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG-------LQVLRDARGWDRPSDHVP 260 Query: 298 ISIDYD 303 + ++ Sbjct: 261 VIATFN 266 >gi|159127707|gb|EDP52822.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus fumigatus A1163] Length = 606 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 43/346 (12%), Positives = 92/346 (26%), Gaps = 74/346 (21%) Query: 6 VLALVFFLVPCTASVAQKV---------RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 + AL TA+ + + S+N+N L+ ++ Sbjct: 272 LTALTVTGSNTTAAAPTDLESAGTCGGVTVGSYNVNNLAPN-------------STTLPK 318 Query: 57 LRQYAKNL--DADIVFLQEMGSYNAVAK-----------------VFPKNTWCIFYSTER 97 + Q+ +VFLQE+ + F Sbjct: 319 IAQHIAQYLKSPTLVFLQEIQDDDGPTDDGVVSANKTLSTLVQSIADQGGIRYSFVDIAP 378 Query: 98 LINHSKRDSNNDIHTAIAVRKKNVRVLQ------------------QSYPLLGAKDSFSR 139 + +I A +R+ + P L + + Sbjct: 379 VNKEDGGQPGGNIRVAYLYDPSVIRLRDANPGSNTDANEVLPGPELKYNPGLIDPSNNAW 438 Query: 140 AGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKD 193 +R+ + E K + +++H S S+E P + QA+ + + Sbjct: 439 LNSRKPLAAAWETLDGKNKFFTVNVHFTSKGGGSSIEGDARPPVNGGVATREAQAKLVAE 498 Query: 194 WITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 + + ++S +++GDFN + + L + Sbjct: 499 FTSSILAEDSTAKIIVSGDFNEFTFAQPLETFLAE--SGLEDLDEVAGIAATERYTYLYD 556 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N +D+ + + + S + SDH P Sbjct: 557 MNCQQLDHMFVSPAL-----ATGAQMHHLHVNTWVSFDDQASDHDP 597 >gi|70999964|ref|XP_754699.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus fumigatus Af293] gi|66852336|gb|EAL92661.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus fumigatus Af293] Length = 606 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 43/346 (12%), Positives = 92/346 (26%), Gaps = 74/346 (21%) Query: 6 VLALVFFLVPCTASVAQKV---------RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 + AL TA+ + + S+N+N L+ ++ Sbjct: 272 LTALTVTGSNTTAAAPTDLESAGTCGGVTVGSYNVNNLAPN-------------STTLPK 318 Query: 57 LRQYAKNL--DADIVFLQEMGSYNAVAK-----------------VFPKNTWCIFYSTER 97 + Q+ +VFLQE+ + F Sbjct: 319 IAQHIAQYLKSPTLVFLQEIQDDDGPTDDGVVSANKTLSTLVQSIADQGGIRYSFVDIAP 378 Query: 98 LINHSKRDSNNDIHTAIAVRKKNVRVLQ------------------QSYPLLGAKDSFSR 139 + +I A +R+ + P L + + Sbjct: 379 VNKEDGGQPGGNIRVAYLYDPSVIRLRDANPGSNTDANEVLPGPELKYNPGLIDPSNNAW 438 Query: 140 AGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKD 193 +R+ + E K + +++H S S+E P + QA+ + + Sbjct: 439 LNSRKPLAAAWETLDGKNKFFTVNVHFTSKGGGSSIEGDARPPVNGGVATREAQAKLVAE 498 Query: 194 WITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 + + ++S +++GDFN + + L + Sbjct: 499 FTSSILAEDSTAKIIVSGDFNEFTFAQPLETFLAE--SGLEDLDEVAGIAATERYTYLYD 556 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N +D+ + + + S + SDH P Sbjct: 557 MNCQQLDHMFVSPAL-----ATGAQMHHLHVNTWVSFDDQASDHDP 597 >gi|261219142|ref|ZP_05933423.1| endonuclease/exonuclease/phosphatase [Brucella ceti M13/05/1] gi|261322204|ref|ZP_05961401.1| endonuclease/exonuclease/phosphatase [Brucella ceti M644/93/1] gi|260924231|gb|EEX90799.1| endonuclease/exonuclease/phosphatase [Brucella ceti M13/05/1] gi|261294894|gb|EEX98390.1| endonuclease/exonuclease/phosphatase [Brucella ceti M644/93/1] Length = 310 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 84/303 (27%), Gaps = 60/303 (19%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 ADI+ LQE+ + A+ + + R + + I A+ +R Sbjct: 6 IAETRADILCLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMRDTT 65 Query: 118 ---KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKIWVL 160 + S+ L D R R + + + I G+ + + Sbjct: 66 RDGQPIEVNEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPLSLF 125 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNRKIN 216 HLKS + ++ + S + +A+ ++ I +K + ++I GDFN Sbjct: 126 VAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFNDYRE 185 Query: 217 Y----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP--- 256 + + ++ + Sbjct: 186 RILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLERHLC 245 Query: 257 -IDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +DY + + + + + SDHCP+S+ Sbjct: 246 QLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHCPVSV 305 Query: 301 DYD 303 + Sbjct: 306 TLN 308 >gi|300772811|ref|ZP_07082681.1| possible secreted protein [Sphingobacterium spiritivorum ATCC 33861] gi|300761114|gb|EFK57940.1| possible secreted protein [Sphingobacterium spiritivorum ATCC 33861] Length = 269 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 45/325 (13%), Positives = 93/325 (28%), Gaps = 77/325 (23%) Query: 1 MIR-KYVLALVFFLVPCTASVAQK------------VRLVSWNINTLSEQEGVSLWKNSV 47 M + K ++ F + A + K + ++++NI+ + + + Sbjct: 1 MNKLKILMLTCFVSIASLACSSDKKEIPEPKTEKSKLTVITYNIHHGAPENSEVV----- 55 Query: 48 KRTTSDYTLLRQYAKNLDADIVFLQEMGSY-------NAVAKVFPKNTWCIFYSTERLIN 100 + + K + D+V LQE+ + K+ ++S Sbjct: 56 -----NLENIANTIKQKNPDLVALQEVDVNVPRSGKVDQAKKLAELLNMNYYFSKSLD-- 108 Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWV 159 N +A+ K + L R +++ NGK + Sbjct: 109 ------YNGGEYGVAILSKFPISNTRRLELPMP----VAGEKRTVAMATIDLGNGKTLEF 158 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL + QA +L + + P +I GD+N + N + Sbjct: 159 ASTHLDLNVPN-------------RTAQATFLNEL---SVQLNKPIMIGGDYNAESNSVE 202 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 + +N ID+ ++ A + S + Sbjct: 203 -------LTELRKQYTLSCVNGCPNSFPVRNPTK--AIDFVASNKLAVQQYSLLSAVALT 253 Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304 G SDH P+ Y++ Sbjct: 254 ---------GSYASDHLPVVAIYNY 269 >gi|241206774|ref|YP_002977870.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860664|gb|ACS58331.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 267 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 76/307 (24%), Gaps = 68/307 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +WNIN ++ Q DI+ LQE N + Sbjct: 3 FSITTWNIN----------------SVRLRMPIVEQLVLKHRPDILCLQETKVTNDLFPA 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P L + +A+ + G D+ Sbjct: 47 APL---------RALGYTHIIIHGQKGYHGVAIASRIPLTEDHRQDYCGVGDARH----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + E +++ + + ++ + D + T +P + + + E+ Sbjct: 93 --ISAIFERGNRRVRLHNFYVPAG--GDEPDRTINPKFGHKLDFIEEM-KLLKANGEANT 147 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N + + + + L + + Sbjct: 148 SAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETEGLLEVMKRGAWLDLMRQHVPASEKL 207 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + L R SDH P Sbjct: 208 YTWWSYRAKDWEAADRGRRLDHIWSSSDLGPHLK-------RIEILKEARGWDRPSDHVP 260 Query: 298 ISIDYDF 304 ++ +DF Sbjct: 261 VTAHFDF 267 >gi|254422826|ref|ZP_05036544.1| exodeoxyribonuclease III [Synechococcus sp. PCC 7335] gi|196190315|gb|EDX85279.1| exodeoxyribonuclease III [Synechococcus sp. PCC 7335] Length = 261 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 97/305 (31%), Gaps = 70/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ SWN+N + + Q+ + D++ LQE + + A Sbjct: 1 MKVTSWNVN----------------SIRTRLEQVTQWLQANPVDVLCLQETKVVDKDFPA 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F + ++ + +A+ + Q GA + G Sbjct: 45 QAFIDIGYHAYFY------------GQKSYNGVALVSRAPLESVQ--MGFGAILDEATVG 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + A + ++ + ++++++ + ++S + Y S LK ++ + E+ Sbjct: 91 DLDAQKRVISGVLGNVRIVNLYVPNGSSINSEKYEYKLS------WLALLKQYLVHQLEA 144 Query: 202 LVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + GDFN + + + F K D + Sbjct: 145 HPKLNVCGDFNIALENKDIYTDKNRDKHIMSSPVERQTLRDVLSVGLSDAFRKFTDEGGH 204 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ + + Y+ + D + +R SDH P Sbjct: 205 -FSWWDYRTNSFARNTGWRIDHHYLSPSLYEIATSCTI-------DTVPRGLERPSDHAP 256 Query: 298 ISIDY 302 ++++Y Sbjct: 257 VTVEY 261 >gi|190571508|ref|YP_001975866.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018910|ref|ZP_03334718.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357780|emb|CAQ55235.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995861|gb|EEB56501.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 260 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 84/304 (27%), Gaps = 72/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N L + + DIV LQE+ Sbjct: 2 LKIATWNVN----------------SIRKRINQLCSFIVDSQIDIVLLQEIKCTEE---- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y+ + + + V K + + ++ + Sbjct: 42 ------QFPYAEIEKLGYEYAVYGQVARNGVCVLSKYPILEKLKIDIVESHQEARY---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E +++ + K+ V +++ + DS Y + L + + ++ Sbjct: 92 --IECVIKHSNNKVRVGSVYVPNGQSPDSHTFEYK------LKFFDNLYERMGTLLKNEE 143 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP----------------NDSLIRFPKEKDSRCNA 247 +IAGD+N ++ + D ++ N + Sbjct: 144 LTIIAGDYNVALDEIDVFD--SNLLNGQVCFHIKEREKLRAILNLGFKDAFRISHLNLQQ 201 Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ A L DD + + SDH P+ Sbjct: 202 FTWWHYQGNSLRNNQGMRIDHMLLSPQAADKLETCYI-------DDRLRKLENPSDHTPV 254 Query: 299 SIDY 302 Sbjct: 255 VCVI 258 >gi|150025222|ref|YP_001296048.1| hypothetical protein FP1150 [Flavobacterium psychrophilum JIP02/86] gi|149771763|emb|CAL43237.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86] Length = 348 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 75/301 (24%), Gaps = 63/301 (20%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + + ++S+N+ L+ + + + + + D++ +QE + Sbjct: 94 EASDKDFVVMSYNVRLLNLFNWIPRDNVAQD--------ILHFVNENNPDLLCIQEYSTS 145 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + S I T A+ K V + + ++ Sbjct: 146 AKIDLKI-------------YPYSSIVMKGKKIRTGQAIFSKFPIVNEGELAFPESNNN- 191 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKS---------------FCFLDSLENTYSPSCS 182 A+ ++I + V +IHL+S + ++ Sbjct: 192 -------AIFADIKIGKDLVRVYNIHLQSIKISPDVKEINENVEGINKQKSQIIFNRISE 244 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 +Q Q + + KK P +I GD N F + Sbjct: 245 AFKKQQQQGEIIMNHKKSCKYPIIICGDMNNSAFSYVYRSIKGNM------QDCFEQAGK 298 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IDY + + SDH PI Sbjct: 299 GFGQTYSFKYYPARIDYIFANSKMRVK-------------NFTNFPDFVNSDHLPIMTRL 345 Query: 303 D 303 Sbjct: 346 S 346 >gi|119944778|ref|YP_942458.1| endonuclease/exonuclease/phosphatase [Psychromonas ingrahamii 37] gi|119863382|gb|ABM02859.1| Endonuclease/exonuclease/phosphatase [Psychromonas ingrahamii 37] Length = 358 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 100/332 (30%), Gaps = 54/332 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +++ ++N+ E ++ + Y D++ QE+ S A+ Sbjct: 24 LKIATFNLFNYLEPPFAYYDFERIYSAEQWAKKQKWITDYVNEFQPDVIGFQEVFSPEAL 83 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137 A++ + + F+ AIA + V + L Sbjct: 84 AELLREQGYE-FFQVVDQPEVIDDFICRSPVVAIASKYPIVDIEAVQADTTLALAMGLKE 142 Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ--------- 187 + +R+ + + + +H KS + E + S S + Sbjct: 143 DFSFSRQVLRATINLPHIGDCDCYVVHFKSKRPMLEHEESKSLSGEKNIIEKLKAQVAGG 202 Query: 188 -----------AQWLKDWITQKKESLVPFVIAGDFNRKIN---------------YLGNN 221 A L + I +++E+ +P ++ GDFN + ++ Sbjct: 203 WGSTIQRGSEAALLLVNMIARREETGLPMILMGDFNNILADGVLDHLVTDTLRFVSKLDS 262 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCN-----ANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 D + + DS F +++ + + + +DY ++ F Sbjct: 263 DAYLEKYCLKDSWDLFQGTENNTEHILRKPTHYFGASSSVLDYILLSCEFDANYHSSLFE 322 Query: 277 EILYNEDD------IKSRGKRLSDHCPISIDY 302 YN D I R +DH + + Sbjct: 323 VSEYNTYDRHLINPIFDRDGESTDHGVVLVTL 354 >gi|71275821|ref|ZP_00652105.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella fastidiosa Dixon] gi|71902300|ref|ZP_00684290.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella fastidiosa Ann-1] gi|170730198|ref|YP_001775631.1| exodeoxyribonuclease III [Xylella fastidiosa M12] gi|71163399|gb|EAO13117.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella fastidiosa Dixon] gi|71727953|gb|EAO30176.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella fastidiosa Ann-1] gi|167964991|gb|ACA12001.1| exodeoxyribonuclease III [Xylella fastidiosa M12] Length = 264 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 86/306 (28%), Gaps = 77/306 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+R+ SWN+N+L+ + L+Q+ D++ LQE Sbjct: 2 KMRIASWNVNSLN----------------VRLSQLQQWLVEAAPDVLGLQET-------- 37 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + + + +A+ + Q Sbjct: 38 --KLEDHQFPGAALAALGYVSVYAGQKTYNGVALLARVALEDVQV------GIPEFEDVQ 89 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 RR + V+ I V+++++ + + + + Y S + W+ ++ + Sbjct: 90 RRVIAATVD----GIRVVNLYVVNGQEVGTEKYAYKLS------WLDAVYHWLAEELQRY 139 Query: 203 VPFVIAGDFNRKINYLGNND-----------------DFWKTIDPNDSLIRFPKEKDSRC 245 V+ GDFN + D K + L + Sbjct: 140 PRLVVLGDFNIAPDARDVYDPQVWNEDHILTSTTERAALDKLLGLG--LHDGFRLHHQDA 197 Query: 246 NANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + ID ++ + + D + +R SDH Sbjct: 198 GIFSWWDYRQASFRRNRGLRIDLTLVSEALRAQAVASGI-------DRVPRGWERPSDHA 250 Query: 297 PISIDY 302 P I+ Sbjct: 251 PAWIEL 256 >gi|242078097|ref|XP_002443817.1| hypothetical protein SORBIDRAFT_07g002730 [Sorghum bicolor] gi|241940167|gb|EES13312.1| hypothetical protein SORBIDRAFT_07g002730 [Sorghum bicolor] Length = 369 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 47/343 (13%), Positives = 95/343 (27%), Gaps = 88/343 (25%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + + ++WN N+L + R SD+ Q LD D++ +QE+ Sbjct: 44 PAEEPRKFLTWNANSL------------LLRMKSDWPAFSQLVARLDPDVICVQEVRMPA 91 Query: 79 AVAKVFPKNTWCI----------------FYSTERLINHSKRDSNNDIHT-AIAVRKKNV 121 A +K PKN + ST ++ S +D A+ K Sbjct: 92 AGSKGAPKNPSELKDDTSSSRDEKQVVLRALSTSPFKDYRVWWSLSDSKYAGTAMFIKKK 151 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 ++ L S R ++ + +L+ + + + S Sbjct: 152 FEPKKVSFNLDRTSSKHETDGR-----VIIAEFESFLLLNTYAPN-----NGWKEEENSF 201 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------------------ 217 + + + +++ P + GD N Sbjct: 202 QRRRKWDKRMLEFVQHV---DKPLIWCGDLNVSHEEIDVSHPDFFSSAKLNGYTPPNQED 258 Query: 218 -------LGNNDDFWKTIDPNDSLIRFPKEK----------DSRCNANKNLRNKIPIDYF 260 F + + + S K ++ IDYF Sbjct: 259 CGQPGFTPAERRRFGNILFQGKLVDAYRHLHKEKDMDGGFSWSGHPIGKYRGKRMRIDYF 318 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + ++ D G SDHCP++++ Sbjct: 319 LVSEQLKDRIVSCEMHGRGIELD-----GFYGSDHCPVTLELS 356 >gi|15927579|ref|NP_375112.1| truncated beta-hemplysin [Staphylococcus aureus subsp. aureus N315] gi|262053147|ref|ZP_06025312.1| truncated beta-hemplysin [Staphylococcus aureus 930918-3] gi|13701798|dbj|BAB43091.1| truncated beta-hemplysin [Staphylococcus aureus subsp. aureus N315] gi|259158954|gb|EEW44033.1| truncated beta-hemplysin [Staphylococcus aureus 930918-3] Length = 289 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 82/278 (29%), Gaps = 28/278 (10%) Query: 43 WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE------ 96 + N + +D Y K + D+V E A K+ Y T Sbjct: 17 YPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQ 74 Query: 97 --RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 S +A+ K + + F N+ V +E NG Sbjct: 75 SGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNG 133 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNR 213 K + V+ H +S DS + ++Q + + D++ + I GD N Sbjct: 134 KNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNV 189 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK 268 D K ++ ND L N +DY D++ + Sbjct: 190 N-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQ 248 Query: 269 --FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300 L+ E +E D + SDH PI Sbjct: 249 PKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 286 >gi|145220782|ref|YP_001131460.1| exodeoxyribonuclease III Xth [Mycobacterium gilvum PYR-GCK] gi|315442264|ref|YP_004075143.1| exodeoxyribonuclease III [Mycobacterium sp. Spyr1] gi|145213268|gb|ABP42672.1| Exodeoxyribonuclease III [Mycobacterium gilvum PYR-GCK] gi|315260567|gb|ADT97308.1| Exodeoxyribonuclease III [Mycobacterium sp. Spyr1] Length = 272 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 30/305 (9%), Positives = 67/305 (21%), Gaps = 61/305 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N + + + + D D++ +QE + Sbjct: 1 MRLATWNVN----------------SIRARVDRVTDWLERADVDVLAMQETKCSDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ + + S Sbjct: 41 ------QFPTMPFAALGYDVVHCGFSQWNGVAIASRVGIDAVEVGFEGQPTWSDKPEAEA 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202 A + + V +++ + +DS TY + L + Sbjct: 95 AAEARALGATCGGVRVWSLYVPNGRSIDSPHYTYK------LKWLAALHNTAQGWLADDP 148 Query: 203 -VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P + GD+N + I Sbjct: 149 STPVALVGDWNIAPVDDDVWDISLFSESTHVTAPERAAFNAIVDAGFTDVVRPFTPGP-G 207 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 ID+ + + + + + SDH P Sbjct: 208 TFTYWDYTQLRFPKNRGMRIDFILGSPTLAELVTHAEIARDERKTGKNRVGS--PSDHAP 265 Query: 298 ISIDY 302 + +D Sbjct: 266 VVVDL 270 >gi|261856746|ref|YP_003264029.1| endonuclease/exonuclease/phosphatase [Halothiobacillus neapolitanus c2] gi|261837215|gb|ACX96982.1| Endonuclease/exonuclease/phosphatase [Halothiobacillus neapolitanus c2] Length = 286 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 44/295 (14%), Positives = 85/295 (28%), Gaps = 55/295 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLW--KNSV-----KRTTSDYTLLRQYAKNLDADI 68 + + +RL+S+NI + + + + Q D+ Sbjct: 24 PSTHALRPLRLLSYNIQAGIGTRNFRDYVLNGWKHVLPFPKRMQNLDHIAQLLSQF--DL 81 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 + LQE + + + + S RD + A+ + + + Sbjct: 82 IGLQEADGGSLRSHFLNQIEYLAMRSNMPFWATRINRDLGHWGQHALGMLSRVEPYHIER 141 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 Y L R R V + G+++ V HL S S Q Sbjct: 142 YALPA------RIPGRGVVLADFDWYGQRVRVQVSHL-------------SLSDRARRAQ 182 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 L I + +E ++ DFN N ++ L P Sbjct: 183 LDRL---IARCREFDGVNIVMADFNCTPNNRDLQRLC---LEAGLKLPFAPPLT------ 230 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + K ID+ ++ +N + + + +SDH P+S+ Sbjct: 231 YPSWEPKRAIDHILVSENI--------------EIESVDALTYGVSDHAPLSMQI 271 >gi|291543155|emb|CBL16265.1| exodeoxyribonuclease III [Ruminococcus bromii L2-63] Length = 252 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 74/303 (24%), Gaps = 78/303 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +L+SWN+N L + K++DADI LQE + Sbjct: 3 KLISWNVNGLRACVTKGFE---------------NFFKDVDADIFCLQETKLQEGQIDLL 47 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + + ++ ++ A+ K + + D R Sbjct: 48 LEGYHQYW-----------CYADKKGYSGTAMFTKEEPLNVCYGIGIDEHDHEGR----- 91 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ +V+ + + + + L++ P Sbjct: 92 ----VITAEFDNCFVVTCYTPNSQSELKRLDYRMKWEDDFKAYLKKLEE--------KKP 139 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GD N + + + + Sbjct: 140 VIMCGDLNVAHKEIDLKNPKTNRKNAGFTDEERSKMTALLDDGFIDTYRYFYPDTEGVYS 199 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF++ + L + SDHCP+ + Sbjct: 200 WWSYRFKAREKNAGWRIDYFIVSKALESKLDGAKIHTEIL-----------GSDHCPVEL 248 Query: 301 DYD 303 D Sbjct: 249 TID 251 >gi|320007613|gb|ADW02463.1| exodeoxyribonuclease III Xth [Streptomyces flavogriseus ATCC 33331] Length = 260 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 76/304 (25%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N T+ L + ++ D++ +QE Sbjct: 1 MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCIQETKCT------ 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + +AV + + L G + R Sbjct: 39 ----LEQFPTDALREAGYESAVNATGRWNGVAVLSRVGLTDVVTG-LPGGPEYDGVQEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V V +++ + + Y + + L++ + + Sbjct: 94 A-----VSATCGGARVWSVYVPNGREVAHEHYAYK------LRWLEALREAVAADAAGTL 142 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 PF + GD+N D + P+ Sbjct: 143 PFAVLGDYNIAPTDEDVWDPAVFEGATHVTPAEREALAALRGTGLSDVVPRPLKYD-RPY 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID + + D + +GK SDH P+ Sbjct: 202 SYWDYRQLAFPKNRGMRIDLVYGNAPFAAAVKDSYV-------DREERKGKGASDHAPVV 254 Query: 300 IDYD 303 +D D Sbjct: 255 VDLD 258 >gi|281424056|ref|ZP_06254969.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella oris F0302] gi|281401839|gb|EFB32670.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella oris F0302] Length = 313 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 36/297 (12%), Positives = 79/297 (26%), Gaps = 39/297 (13%) Query: 31 INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD--------ADIVFLQEMGSYNAVAK 82 + L + + R + Q D+V L E+ + + Sbjct: 33 VEYLPDSYHHW----NANRYWKKLNHIGQEIIACGGEGNSWMLPDLVALCEVENDTVMRD 88 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + ++ + N S + +A+ ++ + Sbjct: 89 LTKRSLLRQARYEYVMPN-----SPDVRGIDVALLYSPFTFRLLNWHAIRVAPIKGMRPT 143 Query: 143 RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + +I +G + V +H S + + QQA + + Sbjct: 144 RDILYAAGQIISGDTLHVFVVHAPSRSGGEIATRPNRMAVVKRLQQAVD----SVKSNST 199 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 +IAGDFN + + + K K +D+ + Sbjct: 200 SAHIIIAGDFNDYTQDVSIQYLISCGLAD---VSASAKGTHGAKGTYKYRGEWGSLDHVL 256 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRG--------------KRLSDHCPISIDYDF 304 + + ++ + D + G SDH P+ + +DF Sbjct: 257 CSEALVPLFRSCTIADFPFLLTDDEVYGGLQPLRNFHGAKYLNGFSDHLPLVVKFDF 313 >gi|319899105|ref|YP_004159198.1| exodeoxyribonuclease III [Bartonella clarridgeiae 73] gi|319403069|emb|CBI76624.1| exodeoxyribonuclease III [Bartonella clarridgeiae 73] Length = 260 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 88/303 (29%), Gaps = 68/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNI + + L ++ K DIV LQE+ S + Sbjct: 1 MKIATWNIAG----------------IKARHETLCKWLKQNQPDIVCLQEIKSVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 T + + +A+ K V D +R Sbjct: 41 ------NFPRDTIESLGYHIETHGQKSFNGVAILSKKVPDEIIRRLPGDNNDKQARY--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKESL 202 +E + N I V ++L + ++S + Y A+ L + Sbjct: 92 --IETVYSTNKGSIRVASLYLPNGNPINSEKYLYKMEWMKRFYTHAKSLLAY-------E 142 Query: 203 VPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++AGD+N +L ++ I D+ + Sbjct: 143 EPLILAGDYNVIPTPLDAKNPQEWSNDALFLPQIRQIFQCIVHLGFYDAIRCVTDTPSFS 202 Query: 248 NKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + N I ID+ ++ A L I ++ SDH PI + Sbjct: 203 FWDFQAGAWKKNNGIRIDHLLLSPEAADQL-------ICAYSQTEMRGHQKPSDHIPIWV 255 Query: 301 DYD 303 + Sbjct: 256 QLN 258 >gi|17986911|ref|NP_539545.1| hypothetical protein BMEI0628 [Brucella melitensis bv. 1 str. 16M] gi|17982554|gb|AAL51809.1| hypothetical protein BMEI0628 [Brucella melitensis bv. 1 str. 16M] Length = 337 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 84/303 (27%), Gaps = 60/303 (19%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 ADI+ LQE+ + A+ + + R + + I A+ +R Sbjct: 33 IAETRADILCLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMRDTT 92 Query: 118 ---KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKIWVL 160 + S+ L D R R + + + I G+ + + Sbjct: 93 RDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPLSLF 152 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNRKIN 216 HLKS + ++ + S + +A+ ++ I +K + ++I GDFN Sbjct: 153 VAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFNDYRE 212 Query: 217 Y----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP--- 256 + + ++ + Sbjct: 213 RILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLERHLC 272 Query: 257 -IDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +DY + + + + + SDHCP+S+ Sbjct: 273 QLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHCPVSV 332 Query: 301 DYD 303 + Sbjct: 333 TLN 335 >gi|330888867|gb|EGH21528.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. mori str. 301020] Length = 261 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 42/295 (14%), Positives = 88/295 (29%), Gaps = 51/295 (17%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 S + + +++ N++ LR+ + + ADIVFLQE+ Sbjct: 11 ATPVSASVSLNVLTMNMHMGFGIFNRRF----------ILPELREAVRTVSADIVFLQEV 60 Query: 75 ----GSYNAVAKVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 S+ K +PK + F + + + + D A+ K + ++ Sbjct: 61 HGEHQSHARSVKDWPKISQYEFLADSMWNDFAYGRNAVYPDGDHGNALLSKYPIIQHENL 120 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + S R + ++E+ V + + S QQ Sbjct: 121 DI-----SIHGTEQRGLLHCILEMPYTG-RVHAVCVHLGLR-----------ESHRRQQL 163 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 L + + + P ++AGDFN ++ F + + + Sbjct: 164 NLLAELMER-LPEGEPVIVAGDFNDWRQRAD------ALLEGTGLHEVFVERFGAPAKSF 216 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +D + S LSDH P++++ Sbjct: 217 PARWPLLRLDRIYIRNATSHRPKVLS-----------SRPWSHLSDHAPLAVELT 260 >gi|295132080|ref|YP_003582756.1| endonuclease [Zunongwangia profunda SM-A87] gi|294980095|gb|ADF50560.1| endonuclease [Zunongwangia profunda SM-A87] Length = 346 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 91/337 (27%), Gaps = 49/337 (14%) Query: 6 VLALVFFLVPCTASVA--QKVRLVSWNINTLSEQEG-----------VSLWKNSVKRTTS 52 VL L++ + + + + +N L + + + ++ Sbjct: 8 VLFLLYCGIGFSQDQDTYDVLTIAFYNTENLFDTQNDDFTFDDDRTPEGKDAWTKEKYEL 67 Query: 53 DYTLLRQYAKN-------LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105 + Q +I+ L E+ + + + + I H Sbjct: 68 KLNHIGQVVSEIGTELSGHSPEIIGLCEVENIRVLEDLLNTEKLQ---NKNYKIIHFDSP 124 Query: 106 SNNDIHTAIAVRKKNVR-VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164 I A+ K ++ +L + R R + I + L H Sbjct: 125 DRRGIDNALLYNTKVFTPTQSRNIEVLIRNEEGKRIYTRDILVATGRIQNENFAFLVNHW 184 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 S + Y S +L++ + + D + + + + GDFN + Sbjct: 185 PSRSGGEKASRNYRKSAALVN---RKICDSL-WAIDPSLKIINMGDFNDDPKNKNVKNVL 240 Query: 225 WKTIDPNDSLIRFP--KEKDSRCNANKNLRNKIPIDYFVMDQ-------NAYKFLIQESF 275 + PN P K + N D ++ +++ F Sbjct: 241 KTSESPNQFQFYNPMLKLYKKGVGSLAYRDNWNLFDQILISGAMMTKNYEHFQYYKAGVF 300 Query: 276 SEILYNEDDIKSRGKRL------------SDHCPISI 300 + + +G SDH P+ + Sbjct: 301 KKDYLVTSTGQYKGYPFRSYGYNGYLGGYSDHFPVYL 337 >gi|325106148|ref|YP_004275802.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145] gi|324974996|gb|ADY53980.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145] Length = 372 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 85/306 (27%), Gaps = 62/306 (20%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + VRL+++N++ + + D++ +QE + Sbjct: 103 SSSVRLMTYNVHHFKQFGSEVDSNARN--------NILDLINEEQPDVIAIQEFLTRKKG 154 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 N I + + + + + IA+ K V + L Sbjct: 155 KLKSENNIRKILGTEDYYFYSTSGNDYESM--GIAIFSKLPIVNKGKLTELDP------K 206 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP--------------------- 179 G+ + + V+ N K + IHL S F + Sbjct: 207 GSNNGLWIDVKKNNKVFRIYTIHLASIAFAPVDYYYFKRISNMKTEDEDIKHGRRILSRL 266 Query: 180 --SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + ++Q + LK + PFVI GDFN N + + Sbjct: 267 KSAFVRRAKQVEILKSYTDSC---KTPFVIMGDFNDTPVSYSVN----QISKDLKNSFIE 319 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 R IDY + ++ ++ K K SDH P Sbjct: 320 KGVGIGRTYNGDFPNF--QIDYILTTKD--------------FDIHTYKIIKKAYSDHYP 363 Query: 298 ISIDYD 303 + +D Sbjct: 364 VRVDVS 369 >gi|253580808|ref|ZP_04858071.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847878|gb|EES75845.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 251 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 78/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + G ++ LDADI LQE K+ Sbjct: 1 MKLISWNVNGIRACIGKGFEES---------------FAALDADIFCLQETKCQQGQVKL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +N ++ AV K + + G R Sbjct: 46 ELPGYYQYW-----------NYANRRGYSGTAVFTKKEPLSV----VYGIGIEKHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +K +++ ++ + + + ++ K + Sbjct: 91 -----VITLEYEKFYLVTVYTPN-------SQSELRRLEYRMHWEEDFLAYL-LKLQESK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GDFN + + + + F Sbjct: 138 PVICCGDFNVAHQEIDLKNPKTNRKNAGFTDEERACFGKVLESGFIDTFRYFYPDVEGRY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ L SDHCP+ Sbjct: 198 SWWSYRFKAREKNAGWRIDYFITSPQLKDKLKGAEIH-----------SEIMGSDHCPVE 246 Query: 300 IDYD 303 + Sbjct: 247 LQIT 250 >gi|238922913|ref|YP_002936426.1| exodeoxyribonuclease [Eubacterium rectale ATCC 33656] gi|238874585|gb|ACR74292.1| exodeoxyribonuclease [Eubacterium rectale ATCC 33656] Length = 251 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 79/305 (25%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + ++DAD +QE A Sbjct: 1 MKFISWNVNGLRACVQKGF---------------LDFFNSIDADFFCIQE-SKLQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ KN + + D R Sbjct: 45 LDLPGYHQYWNYAEKKGY----------SGTAIFAKNEPLSVSYGIGIEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ + + Q ++++ ++ Sbjct: 91 -----VITLEYDNFYLVTCYTPN-------SQNELKRLPYRMQWEDDFREYLKT-LDAKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N N + + F Sbjct: 138 PVVLCGDLNVAHNEIDLKNPKTNRKNAGFSDEERAKMTELLGSGFTDTFRYFYPDAEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ + L + + + SDHCP+ Sbjct: 198 SWWSYRFKAREKNAGWRIDYFITSKRINDKLKKAAIHTDVL-----------GSDHCPVE 246 Query: 300 IDYDF 304 +D +F Sbjct: 247 VDIEF 251 >gi|54296503|ref|YP_122872.1| hypothetical protein lpp0534 [Legionella pneumophila str. Paris] gi|53750288|emb|CAH11682.1| hypothetical protein lpp0534 [Legionella pneumophila str. Paris] Length = 257 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 89/294 (30%), Gaps = 50/294 (17%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + V L+++NI+ V +R L+ D VFLQE+ Sbjct: 6 SMQPEVRSVSLITYNIHKGFGVGAVRFL----------LPEMRDAIAGLNPDFVFLQEVQ 55 Query: 76 --SYNAVAKVFPKN----TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 ++ I + ++K H A+ K +S Sbjct: 56 GKHRKREKRIVSWPDSPQCEYIAENIWPHYVYAKNAVYQSGHHGNAILSKYPFESFESIN 115 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 L +R + ++++ I +L +HL F + ++Q + Sbjct: 116 LSN-----MNRASRGILHTQLKLDNNIIHLLCVHLGLFK-------------AERTEQCK 157 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L I P ++AGDFN + + + + ++ + + + Sbjct: 158 ALIQRIKDVVPKNEPMIMAGDFNDWRHV--ISKILAENLGIEEAFVALEGQH---ARSFP 212 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + +D + + + LSDH P+ ++ Sbjct: 213 AIKPALCVDRVYFRGMKVQEVAC-----------LQGKPWRMLSDHLPLYARFE 255 >gi|325917489|ref|ZP_08179695.1| Exodeoxyribonuclease III [Xanthomonas vesicatoria ATCC 35937] gi|325536283|gb|EGD08073.1| Exodeoxyribonuclease III [Xanthomonas vesicatoria ATCC 35937] Length = 259 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ SWN+N+L+ L+Q+ + D+V +QE + + Sbjct: 1 MKIASWNVNSLN----------------VRLPHLQQWLTDFAPDVVGIQETKLEDHKFPD 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + +A+ + + Q F Sbjct: 45 AALAALGYRSVFC------------GQKTYNGVAILSRAPALDVQ-----MGIPGFDDVQ 87 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + ++++++ + + + + Y + + + DWI Q+ + Sbjct: 88 QRVIAATV-----DGVRIINLYVVNGQDVGTDKYAYK------LRWLEAVHDWIAQELQR 136 Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPND-----------SLIRFPKEKDSRCN 246 V+ GDFN + +D + L + Sbjct: 137 HPQLVVLGDFNIAPDARDVHDPVVWNEAHILTSAAERAALEKLLALGLHDAFRLHHDDAE 196 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID ++ + D +R SDH P Sbjct: 197 QFSWWDYRQAAYRRNLGLRIDLTLVSDALRARAVGAGI-------DREPRTWERPSDHAP 249 Query: 298 ISIDY 302 + Sbjct: 250 AWVQL 254 >gi|307294591|ref|ZP_07574433.1| exodeoxyribonuclease III Xth [Sphingobium chlorophenolicum L-1] gi|306879065|gb|EFN10283.1| exodeoxyribonuclease III Xth [Sphingobium chlorophenolicum L-1] Length = 256 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 84/304 (27%), Gaps = 72/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NIN + L ++ DI LQE+ + + Sbjct: 1 MRIATFNING----------------IKARLPRLLEWLDETRPDIACLQEIKTSDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-VLQQSYPLLGAKDSFSRAGN 142 + + +A+ + V + +D SR Sbjct: 41 ------TFPVKDIEDVGYGAIWHGQKGFNGVAILARGETPVEVRRGLEGEPEDEHSRY-- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +E + K + V I+L + + Y + + L+ T+ Sbjct: 93 -------LEADVKGLRVASIYLPNGNPQPGPKFDYK------LRWMKRLRARATEIWAEE 139 Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 VP ++AGD+N + + + + + + Sbjct: 140 VPAILAGDYNVIPRDKDVYSVKAMADDALMQPESRAAYRRLLGDGWTDAIASRHPAGGVW 199 Query: 247 ANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID+ ++ A LI D ++ SDH P Sbjct: 200 TYWDYQMNAWPRDAGFRIDHLLLSPAAADRLIDAQV-------DKDFRGREKASDHAPTW 252 Query: 300 IDYD 303 ++ Sbjct: 253 VELS 256 >gi|317056539|ref|YP_004105006.1| exodeoxyribonuclease III Xth [Ruminococcus albus 7] gi|315448808|gb|ADU22372.1| exodeoxyribonuclease III Xth [Ruminococcus albus 7] Length = 250 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 71/304 (23%), Gaps = 79/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N + DADI +QE A Sbjct: 1 MKFISWNVNGFRACLQKGFG---------------DFFTAADADIFCIQETKMQPDQADF 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ F+S ++ AV K + + D Sbjct: 46 SPEGYLKYFHSAV-----------KKGYSGTAVYTKKEPLEVKFGLNGTHTDEGR----- 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + + ++ + + + L + Sbjct: 90 -----VITCEFEDYYFVCCYVPNAQNELKRIDYRMEFEDDMRAYLSQL--------DKTK 136 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V GD N + + F + + A Sbjct: 137 PVVYCGDLNVAHEEIDLKNPKSNAGNAGFSDEERGKFTELLGAGFADTFRRLYPDKAGAY 196 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + + SDHCP+ Sbjct: 197 SWWSYRFNARKNNAGWRIDYFVVSERLMDKVKDSKIL-----------SDITGSDHCPVE 245 Query: 300 IDYD 303 +D + Sbjct: 246 LDIE 249 >gi|146310939|ref|YP_001176013.1| endonuclease/exonuclease/phosphatase [Enterobacter sp. 638] gi|145317815|gb|ABP59962.1| Endonuclease/exonuclease/phosphatase [Enterobacter sp. 638] Length = 253 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 36/286 (12%), Positives = 73/286 (25%), Gaps = 49/286 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++++ N + LR + + ADIV LQE+ + + Sbjct: 9 SLKILTINTHKGFTAFNRRF----------ILPELRDAVRTVGADIVCLQEVMGAHEIHP 58 Query: 83 V----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P T F + +++ + H AV + S Sbjct: 59 MHVENWPDTTHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRFPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + R + + + + + Q + W+ Sbjct: 114 VGESEKRGLLYCRITPPELAFPIHVGCVHLGLR-----------EAHRQAQLNMMAKWVN 162 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 P V+AGDFN + +D F + + Sbjct: 163 A-LPEGEPVVVAGDFNDWRQRANHPLKAQAGLDE-----IFTRAHGRPARTFPVSFPVLR 216 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + + LSDH P+S + Sbjct: 217 LDRIYVKNAHASS-----------PTALALRTWRHLSDHAPLSAEI 251 >gi|282917354|ref|ZP_06325109.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus D139] gi|283771169|ref|ZP_06344060.1| phospholipase C [Staphylococcus aureus subsp. aureus H19] gi|282318981|gb|EFB49336.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus D139] gi|283459763|gb|EFC06854.1| phospholipase C [Staphylococcus aureus subsp. aureus H19] Length = 274 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 82/278 (29%), Gaps = 28/278 (10%) Query: 43 WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE------ 96 + N + +D Y K + D+V E A K+ Y T Sbjct: 2 YPNWGQYKRADLIGQSNYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQ 59 Query: 97 --RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 S +A+ K + + F N+ V +E NG Sbjct: 60 SGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNG 118 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNR 213 K + V+ H +S DS + ++Q + + D++ + I GD N Sbjct: 119 KNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNV 174 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK 268 D K ++ ND L N +DY D++ + Sbjct: 175 N-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQ 233 Query: 269 --FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300 L+ E +E D + SDH PI Sbjct: 234 PKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 271 >gi|260173227|ref|ZP_05759639.1| Endonuclease/exonuclease/phosphatase [Bacteroides sp. D2] gi|315921500|ref|ZP_07917740.1| metallophosphoesterase [Bacteroides sp. D2] gi|313695375|gb|EFS32210.1| metallophosphoesterase [Bacteroides sp. D2] Length = 263 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 47/288 (16%), Positives = 80/288 (27%), Gaps = 67/288 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 VR++++N+ + L + K+ D V LQE+ S + Sbjct: 27 VRVMTYNLRFG---------------ELASLEELAHHIKSFKPDFVALQEVDSKTDRKRT 71 Query: 84 FPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + Y T + K + + I + K + Q L R Sbjct: 72 PHQKGKDFISELAYHTGMFGLYGKTIDYSTGYYGIGMLSKYPYISVQKIMLPHPVKEHER 131 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R +E L E+ I HL S ++Q +++ Sbjct: 132 ---RAMLEGLFEMGNDTIVFTSTHL------------DVNSQETRAEQIKFITGHFKNY- 175 Query: 200 ESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 P ++ GDFN + F + D + I Sbjct: 176 --KYPVILGGDFNARHYSEVIRGMDSWFAASNDD---------------FGMPAWKPVIK 218 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY +I + L LSDH PI + ++ Sbjct: 219 IDYLFAYPQKGWRVISTQTVQSL------------LSDHLPIITELEY 254 >gi|262200666|ref|YP_003271874.1| exodeoxyribonuclease III Xth [Gordonia bronchialis DSM 43247] gi|262084013|gb|ACY19981.1| exodeoxyribonuclease III Xth [Gordonia bronchialis DSM 43247] Length = 262 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 79/301 (26%), Gaps = 63/301 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + + ++ D D++ +QE ++ + Sbjct: 1 MRIATWNVN----------------SIRARSETVVAWMEHHDVDVLAMQETKCHDDAFPL 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ + + S Sbjct: 45 M----------SFLVAGYDVTHVGQGAYNGVAIASRVGLDEIEVGFEGMPPLSVDGREIV 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + G + V +++ + +D Y + + L D Sbjct: 95 EARAISARCAG--VRVWSLYVPNGRAIDDPHYRYKLA------WLEALADRSALWLAHDP 146 Query: 204 P--FVIAGDFNR----------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++AGD+N +D + P Sbjct: 147 AAQIMLAGDWNVAQRDTDVWDPGFFAGKPHVSDAERAAIAAFLDAGLTDSALPYADGYTF 206 Query: 246 NANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 +LR + IDY + + D + K SDH P+ +D Sbjct: 207 WDYTSLRFPRNEGMRIDYALCSPALDTR-------VLGATVDRDARKPKGASDHAPVIVD 259 Query: 302 Y 302 Sbjct: 260 L 260 >gi|78486391|ref|YP_392316.1| exonuclease III [Thiomicrospira crunogena XCL-2] gi|78364677|gb|ABB42642.1| Exodeoxyribonuclease III [Thiomicrospira crunogena XCL-2] Length = 273 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 38/314 (12%), Positives = 81/314 (25%), Gaps = 74/314 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+N+N L+ + DI+ LQE + Sbjct: 1 MKIVSFNVN----------------SVRMRLHQLQALTDSYAPDIIGLQETKVQD----- 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ K VL+ S ++ Sbjct: 40 -----HEFPLADIEAMGYHAIYMGQKTHYGVAILYKKSLVLKASQYGWSHDGEDAQKR-- 92 Query: 144 RAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + E G + V++ F ++ Q L ++ ++ Sbjct: 93 -IIMADFEDQKGNDVRVIN-----GYFPQGENRSHPIKFPAKEAFYQDLMTYLKEECSPE 146 Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241 V+ GDFN ++L ++W T+ + K Sbjct: 147 QNLVVIGDFNISPEDKDIGIGEPNRKRWLRDGKTSFLPEEREWWATLIGWGLKDTYRKVH 206 Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + ID + + + + Sbjct: 207 PEEDRIFSWFDYRSKGFDAEPKRGLRIDTVLATKCLTEKAVDSGV-------AYDIRGMV 259 Query: 291 RLSDHCPISIDYDF 304 + SDH P+ ++ F Sbjct: 260 KPSDHAPVWTEFKF 273 >gi|329895423|ref|ZP_08271004.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC3088] gi|328922306|gb|EGG29652.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC3088] Length = 256 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 33/306 (10%), Positives = 77/306 (25%), Gaps = 78/306 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +RLVSWN+N + +++ + + D++ LQE + Sbjct: 1 MRLVSWNVNGIRAVTKKDFFES---------------FERMAPDVLCLQETKAQDDQVLE 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +S ++ A+ + + + + D+ R Sbjct: 46 ALTELDPAYKVFSNSAEK---------KGYSGTAIITRVEPISVTADMGMPEHDTEGR-- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 ++ + +++ ++ + + + + L+ Sbjct: 95 -------VLCAEFETFYLVTVYTPNSGSELKRLDYRQSWDKDFADYLKTLEQ-------- 139 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS---------------LIRFPKEKDSRCN 246 P V+ GD N + + + + Sbjct: 140 TKPVVVCGDLNVAHQDIDLARPKQNYNKSAGYMQAEIDGFDRLVDLGFVDTYRHFNPNTA 199 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDYF++ L SDHCP Sbjct: 200 KYSWWSYRAGAREKNIGWRIDYFLVTPELTSSLTGAEI-----------YNDVYGSDHCP 248 Query: 298 ISIDYD 303 + ID Sbjct: 249 VGIDIS 254 >gi|292490695|ref|YP_003526134.1| endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus Nc4] gi|291579290|gb|ADE13747.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus Nc4] Length = 286 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 84/304 (27%), Gaps = 58/304 (19%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQY 60 L +++ +RL+S+NI + + + Sbjct: 3 TLALHSPLVSSTKRHPLRLLSYNIQAGVTTSRYHHYLTRSWKHILPDVHRHKTMASIAGV 62 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 D DIV LQE + + + + ++R +N + A+ Sbjct: 63 IS--DFDIVGLQEADVGSLRTGFVNQAELLAELCHFPHWHQQATRRFANIAQQS-NALLS 119 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + +SY L G R A+ + VL IHL Sbjct: 120 RIQPNYVRSYRLPGL------VPGRGAILAHFGNPENPLIVLIIHLALG----------- 162 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 +QQ + + + V+ GD N + + + KT + Sbjct: 163 --RRSRTQQLSLISHLVHEHP----YVVVMGDLNCQPHSPELSALLQKTGLKAPATKIAT 216 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + R K ID+ ++ + + +SDH P+ Sbjct: 217 ---------YPSWRPKRHIDHILVSPSLEVTQVCA--------------LEHTVSDHLPL 253 Query: 299 SIDY 302 + + Sbjct: 254 ATEI 257 >gi|255326144|ref|ZP_05367231.1| exodeoxyribonuclease III [Rothia mucilaginosa ATCC 25296] gi|255296855|gb|EET76185.1| exodeoxyribonuclease III [Rothia mucilaginosa ATCC 25296] Length = 288 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 28/314 (8%), Positives = 76/314 (24%), Gaps = 66/314 (21%) Query: 15 PCTASVA-QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 C+A + +++ +WNIN + + + D D++ LQE Sbjct: 13 ACSAPAKLEGMKIATWNIN----------------SIRARENRVEDWLDEHDVDVLALQE 56 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + + + + + +A+ + Q Sbjct: 57 TKTKDE----------TFPFDLFEFMGYEVAHFGLNQWNGVAIASRVGLEDVQRG-FDNQ 105 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + + V +++ + L Y + + L+ Sbjct: 106 PHFGKTGEPEVLEARAIGATCGGVRVWSLYVPNGRGLTDPHMDYK------LRWMEALRQ 159 Query: 194 WITQKKESLVP--FVIAGDFNRKINYLG-----------------NNDDFWKTIDPNDSL 234 + + + GD+N + + + Sbjct: 160 NVHNELADNPQSQLALVGDWNVAPEDADVWDIDYFLRNEMTHVSAPERRAFAALLEEGMV 219 Query: 235 IRFPKEKDSRCNANKNLRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + ID+ + + + D ++ Sbjct: 220 DVVRPHTPGEYTYWDYQAGRFTKDEGMRIDFQLFSPALAARVERAWI-------DKVERA 272 Query: 289 GKRLSDHCPISIDY 302 G+ SDH P+ ++ Sbjct: 273 GEGASDHTPVVVEI 286 >gi|224024813|ref|ZP_03643179.1| hypothetical protein BACCOPRO_01544 [Bacteroides coprophilus DSM 18228] gi|224018043|gb|EEF76047.1| hypothetical protein BACCOPRO_01544 [Bacteroides coprophilus DSM 18228] Length = 251 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 75/304 (24%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L R+ + LDAD LQE Sbjct: 1 MKLISWNVNGLRACCDKGF---------------REAFQTLDADFFCLQETKMQEG-QLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ + + D R Sbjct: 45 LSFEGYTSYWNYAEKKGY----------SGTAIFTHLKPLNVTYGLGIDVHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + + L + Sbjct: 91 -----VITLEMDNFYLVTVYTPNSQDGLKRLDYRMTWEDDFRNYLLEL--------DKKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + ++ + + F + Sbjct: 138 PVLVCGDLNVAHKEIDLKNPKTNRMNAGFTDQEREKFQILLDAGFIDTFRYFYPEQTGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ + L ++ SDHCP+ Sbjct: 198 SWWSYRFKAREKNAGWRIDYFLASRRLADKLESAKIHTEIF-----------GSDHCPVE 246 Query: 300 IDYD 303 + + Sbjct: 247 VTLN 250 >gi|148271654|ref|YP_001221215.1| putative exonuclease III [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829584|emb|CAN00499.1| putative exonuclease III [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 278 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 30/302 (9%), Positives = 76/302 (25%), Gaps = 59/302 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + + D D++ +QE+ Sbjct: 1 MRVATWNVN----------------SIRTRVGRVVDWLVREDVDVLAMQEIKCK------ 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +A+ + + + A + Sbjct: 39 ----PEQFPMQAFEEAGYEVAVHGLSQWNGVAIASRLPLEDVVTTFEGMPRFGKPDASGQ 94 Query: 144 RAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +E + + +++ + LD +Y L A + W+ + Sbjct: 95 PPLEARAMGATVAGVRLWSLYVPNGRALDDPHYSYK--LEWLGALAADTRAWLA--SDPE 150 Query: 203 VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P + GD+N + + Sbjct: 151 TPLALMGDWNVAPLDTDVWDPALFEGKTHTSEPERAAFAAFLDAGLTDVVRPSIPEGYTY 210 Query: 248 NKNLRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + + + ID+ + + + + + +G SDH P+++D Sbjct: 211 WDYQQLRFPRNEGMRIDFILGNDRFQELVGSPRIH-------RDERKGDGPSDHVPVAVD 263 Query: 302 YD 303 D Sbjct: 264 LD 265 >gi|237753149|ref|ZP_04583629.1| exodeoxyribonuclease LexA [Helicobacter winghamensis ATCC BAA-430] gi|229375416|gb|EEO25507.1| exodeoxyribonuclease LexA [Helicobacter winghamensis ATCC BAA-430] Length = 250 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 80/304 (26%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL+SWN+N L ++ +++AD+ +QE Sbjct: 1 MRLISWNVNGLRACMNKGFM---------------EFFNSVNADVFCIQE-SKMQREQAE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + ++++ + + +A+ K + + + D R Sbjct: 45 FDFPNYEEYWNSAEKKGY----------SGVAIFSKIKPLSVEYDMGIAHHDKEGRI--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++++++ + + L+ S Sbjct: 92 ------ITAEFSDFYLVNVYTPNSKRELERLEYRMEWEDDFRTFLKNLE--------SKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + + A Sbjct: 138 PVIVCGDLNVAHKEIDLKNPKTNRRNAGFTDEEREKMSALLDSGFTDTYRHFYPEKQGAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ + L S + SDHCP+ Sbjct: 198 TWWSYMGKARANNTGWRIDYFLCSKILDSRLKSASIYPEIL-----------GSDHCPVG 246 Query: 300 IDYD 303 I+ D Sbjct: 247 IEID 250 >gi|222087552|ref|YP_002546089.1| exodeoxyribonuclease III [Agrobacterium radiobacter K84] gi|221725000|gb|ACM28156.1| exodeoxyribonuclease III [Agrobacterium radiobacter K84] Length = 267 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 76/306 (24%), Gaps = 68/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +WNIN ++ Q+ DI+ LQE N + Sbjct: 3 FSIATWNIN----------------SVRLRMPIVEQFLMQSRPDILCLQETKVPNEL--- 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + L + +A+ + DS Sbjct: 44 ------FPYAPLRALGYEHIIIHGQKGYHGVAIASRFPLTEDHRQDYCNVGDSRH----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + E G++I V + ++ + D + T +P + + + E Sbjct: 93 --ISAIFERGGRRIRVHNFYVPAG--GDEPDRTINPKFGHKLDFIEEM-KHLHANAEQNT 147 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N + D + + L + + Sbjct: 148 SAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETDGLLEVMKRGAWLDLMRQHVPANEKL 207 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + L + R SDH P Sbjct: 208 YTWWSYRAKDWEVADRGRRLDHIWSSSDLGPLLQ-------RIDILKAARGWDRPSDHVP 260 Query: 298 ISIDYD 303 ++ ++ Sbjct: 261 VTAHFN 266 >gi|326384660|ref|ZP_08206338.1| exodeoxyribonuclease III [Gordonia neofelifaecis NRRL B-59395] gi|326196627|gb|EGD53823.1| exodeoxyribonuclease III [Gordonia neofelifaecis NRRL B-59395] Length = 291 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 85/320 (26%), Gaps = 71/320 (22%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++++ +VS+N+N + + D+V LQE+ Sbjct: 3 SEQLTVVSFNVNGIRAARRRGFD---------------SWLAERSPDVVGLQELRCPP-- 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +V + + + T + +A+ K+ +++ K R Sbjct: 46 EEVGEFDGYTASFDTGSIPG----------RNGVAILTKSPPTAVRTWVTDPPKARGLRE 95 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFL------------DSLENTYSPSCSLLSQQA 188 + V+++ + + V ++L + + LS A Sbjct: 96 YASHGRYIEVDLSDEPVTVACLYLPKGGLPADLQRPGNIREKPDGGAKHLRKMTFLSGFA 155 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPND 232 + L + + F++ GD N + + + P Sbjct: 156 RELDRNRLAARRAGREFLLIGDLNIAHLEHDVTNWRPARKMEGFLPMEREWLGEQLSPRR 215 Query: 233 SLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + R ID+ + D Sbjct: 216 LIDVVRVLHGDRPGPLTWWSWAGESFTKDVGWRIDHQLASPGLAARARWTEV-------D 268 Query: 284 DIKSRGKRLSDHCPISIDYD 303 S RLSDH P+ + YD Sbjct: 269 KEPSPDVRLSDHAPLVVGYD 288 >gi|154497021|ref|ZP_02035717.1| hypothetical protein BACCAP_01314 [Bacteroides capillosus ATCC 29799] gi|150273420|gb|EDN00548.1| hypothetical protein BACCAP_01314 [Bacteroides capillosus ATCC 29799] Length = 250 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 83/303 (27%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L G ++ LDADI +QE A++ Sbjct: 1 MKLISWNVNGLRACLGKGFLES---------------FAALDADIFSIQETKMQPGQAEL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++++ + + AV + + D RA Sbjct: 46 -DLPGYKQYWNSAEKKGY----------SGTAVFTRLEPLNVTYGIGSEEHDREGRA--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + ++++ ++ + + L+ ++ + +S Sbjct: 92 ------ITLEFEDFYLVNCYVPN-------AQRELTRLDWRMEWEDALRAYLLE-LDSRK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + F + A Sbjct: 138 PVIYCGDLNVAHQEIDLKNAKSNRGNAGFTDEERAKMTQLLEAGFVDSFRHLYPDKTGAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ ++ + SDHCP+ Sbjct: 198 SWWSYMFHAREKNAGWRIDYFLVSKSIADKIGDSIIH-----------PEIMGSDHCPVE 246 Query: 300 IDY 302 +D Sbjct: 247 LDI 249 >gi|301385402|ref|ZP_07233820.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato Max13] gi|302060619|ref|ZP_07252160.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato K40] gi|302129991|ref|ZP_07255981.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 261 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 41/296 (13%), Positives = 86/296 (29%), Gaps = 52/296 (17%) Query: 15 PCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 P T A + +++ N++ LR+ +++ ADIVFLQE Sbjct: 10 PVTPVSASVSLNVLTMNMHMGFGIFNRRF----------ILPELREAVRSVSADIVFLQE 59 Query: 74 M--GSYNAVAKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 + ++ +V T + S + + D A+ K + ++ Sbjct: 60 VHGEHHSHARRVKDWPTISQYEFLADSMWSDFAYGRNAVYPDGDHGNALLSKYPIIQHEN 119 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 + R + ++++ V + + F S QQ Sbjct: 120 LDVSIDG-----TEQRGLLHCILQVPDHG-QVHAVCVHLGLF-----------ESHRRQQ 162 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + L + + P ++AGDFN + F + + + Sbjct: 163 LKLLAQLMDR-LPEGAPVIVAGDFNDWRQRAD------ALLQGTGLHEVFVQRFGAPAKS 215 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +D + S LSDH P++++ Sbjct: 216 FPARWPLLRLDRIYVRNATSHRPKVLS-----------SRPWSHLSDHAPLAVEVT 260 >gi|256828507|ref|YP_003157235.1| exodeoxyribonuclease III Xth [Desulfomicrobium baculatum DSM 4028] gi|256577683|gb|ACU88819.1| exodeoxyribonuclease III Xth [Desulfomicrobium baculatum DSM 4028] Length = 257 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 82/304 (26%), Gaps = 75/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ SWN+N G R + + D++ LQE+ + +V Sbjct: 3 LRMHSWNVNGFRAVLGKGF---------------RDWLERAAPDVLGLQEVKAEEG--QV 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + ++ A + + Q G D+ + R Sbjct: 46 GGDRLFDGYHCYW------NAARSKKGYSGTACYSRLEPLAVQR----GLPDTRFQGEGR 95 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +K +++ + + AQ L+ Sbjct: 96 -----VIRLEFEKFHYFNVYFPNGQMSPDRLDYKLGFYDAFLAYAQELRR--------DK 142 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GDFN L + + + F + +A Sbjct: 143 PIVVCGDFNTAHREIDLKNAKANEKTSGFLPIERAWMDRFVAHGYVDTFRRCHGDVEDAY 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + + SDHCP+ Sbjct: 203 SWWTYRFGARSRNVGWRIDYFFVSEELSSAVRDAWIE-----------ADVPGSDHCPVG 251 Query: 300 IDYD 303 + + Sbjct: 252 LALE 255 >gi|149184981|ref|ZP_01863298.1| exonuclease III [Erythrobacter sp. SD-21] gi|148831092|gb|EDL49526.1| exonuclease III [Erythrobacter sp. SD-21] Length = 263 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 32/306 (10%), Positives = 78/306 (25%), Gaps = 71/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 V + +WNIN ++ ++ K D++ LQE+ Sbjct: 2 VSVATWNIN----------------SVRLRMPIVERFLKETAPDVLCLQEIKCQE----- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + L + +A + + ++ Sbjct: 41 ----HQFPYEAFKALGYEHIAVHGQKGYHGVATVSRVPIREFSRHDWQDNGEARH----- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + + + I V ++++ + + Q+ +L+ Sbjct: 92 --VGVELPEHDGMI-VENVYVPAG-----GDEPDREINVKFGQKLDFLERMTRWADAVDR 143 Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247 P +I GDFN + + +D + + + Sbjct: 144 PTLIVGDFNIAPLESDVWNHKQLLKVVSHTPIEVESLQRFMDAHGWADIGREHIKAPERY 203 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ K S + ++ SDH P Sbjct: 204 YSWWSYRAKDWKANDRGRRLDHMWASPELAKQASGHSVH-------EYARDWEKPSDHVP 256 Query: 298 ISIDYD 303 + ++D Sbjct: 257 LVTEFD 262 >gi|296535528|ref|ZP_06897711.1| endonuclease/exonuclease/phosphatase [Roseomonas cervicalis ATCC 49957] gi|296264141|gb|EFH10583.1| endonuclease/exonuclease/phosphatase [Roseomonas cervicalis ATCC 49957] Length = 264 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 35/280 (12%), Positives = 71/280 (25%), Gaps = 58/280 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R +SWNI+ +G D + + D++ +QE+ S Sbjct: 3 LRAMSWNIHAGIGGDG-----------RYDLGRVLGLIRRHRPDLLAVQEIDSRPCGRSA 51 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 +T + + + R + + + ++ L R Sbjct: 52 CAFDTLREAFGGHAIAAETMR--GGEGAYGHMLLSRWPFQEADTHDLSVEG-----REPR 104 Query: 144 RAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +A+ + + G + V+ HL QQA+ + + Sbjct: 105 QAIAARLRMPGGASLGVVAAHLGLRW-------------RERGQQARRMAALVRGMPG-- 149 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 P V+ GDFN + +R + +D Sbjct: 150 -PVVVMGDFNDWSWGGPVWRALAPLL-----------PARTRHRTFPARLPLLRLDEIFC 197 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P+ + Sbjct: 198 RPAQL------------LGRSWVDRDAAIASDHLPVLAEL 225 >gi|284030471|ref|YP_003380402.1| exodeoxyribonuclease III Xth [Kribbella flavida DSM 17836] gi|283809764|gb|ADB31603.1| exodeoxyribonuclease III Xth [Kribbella flavida DSM 17836] Length = 286 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 35/300 (11%), Positives = 70/300 (23%), Gaps = 69/300 (23%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 +WN+N L + D+V LQE K+ Sbjct: 2 ATWNVN----------------SVKQRMPRLLDWLDERAPDVVCLQE-------TKLADD 38 Query: 87 NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146 + + + +A+ K + + F R Sbjct: 39 AFSSLLGAELTARGYETALYGEVQWNGVAILSKVGLDDVVTG--VANAPGFPNPEARAVA 96 Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206 I + +++ + DS Y + L+D + + Sbjct: 97 ATC-----GGIRIHSLYVPNGRVPDSEHYHYKLA------WLAALRDVVAGGPAEQ---I 142 Query: 207 IAGDFNRKINYLGNNDDFW------------KTIDP--NDSLIRFPKEKDSRCNANKNLR 252 + GD N D + + L +++ Sbjct: 143 VCGDMNIAPTDADVFDPAAFQGSTHVTAPERQALAELMATGLHDVVRDRWPTERVFSYWD 202 Query: 253 NK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + ID + + + D +G SDH P+ +D D Sbjct: 203 YRAGMFHQDLGMRIDLTLASDPVAERVKAAWI-------DRKARKGTGPSDHAPVIVDLD 255 >gi|254260300|ref|ZP_04951354.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1710a] gi|254218989|gb|EET08373.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1710a] Length = 305 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 85/309 (27%), Gaps = 52/309 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM------- 74 +RL+SWN+ + G T D A+ L D D++ QE+ Sbjct: 19 TMRLISWNVQWGRDANG-----------TVDLARTVDAARGLGDFDVLCAQELTRGFHAL 67 Query: 75 ---GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 S + A++ + + A+ + + L Sbjct: 68 PGGPSGDQYAELAALLPGYAVFDAIGVDLPPLEPGAPRRQFGNALATRLPVERALRHALP 127 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + + + R A+E+ + + V+ HL+ + + L ++A Sbjct: 128 WPASAAAPSMPRCALEVTLRAPFGPLRVVVTHLEYYSA--QQRLAQVDALRRLHREAAAH 185 Query: 192 KDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF----- 237 + PF ++ GDFN D + + Sbjct: 186 ARASAPPETPASPFAPSARAADAIVCGDFNSAYRSDAYQRFLAPFPDAPRFVDAWLARHP 245 Query: 238 ---PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 P + + + D+ + + L + R SD Sbjct: 246 GKTPPMTAGVYDTAQWSEGPMTCDFAFVTDTLVRRLSRCEI-----------DGTVRASD 294 Query: 295 HCPISIDYD 303 H PI ++ Sbjct: 295 HQPIVLELS 303 >gi|226359829|ref|YP_002777607.1| exodeoxyribonuclease [Rhodococcus opacus B4] gi|226238314|dbj|BAH48662.1| putative exodeoxyribonuclease [Rhodococcus opacus B4] Length = 304 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 86/327 (26%), Gaps = 69/327 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NIN + + ++ + D+V LQE+ + A Sbjct: 1 MRIATFNINGIRAAQRRGFE---------------EWLGDRAPDVVSLQEVRARAAAIPS 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN- 142 + + Y + H +AVR + L Q+ + Sbjct: 46 GVFGRYHLAYDEGEFAGRNGVAILTR-HAPLAVRTWSGTALVQAPGETHLERVELDPQPL 104 Query: 143 --------RRAVELLVEINGKKIWVLDIHLKSFCFL------------DSLENTYSPSCS 182 + V++ I V+ ++L Y Sbjct: 105 ARGLGEFANHGRYIEVDLADAPITVVSMYLPKGGLPAHLQKPGRMRDAPDGGARYDRKMR 164 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWK 226 LS A+ L + ++ GD N + F Sbjct: 165 FLSAFARQLTRSRRTARARGRELLLMGDLNIAHTRHDVRNWRRSNQAEGYLPEEREWFDS 224 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSE 277 + P + + IDY + + + + Sbjct: 225 IVSPRTLVDVVRRHHPGVDGPYSWWSWLGQSFVNDVGWRIDYHLATPHLARAAVTAG--- 281 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 D + +R+SDH P+ +DYDF Sbjct: 282 ----TDRDPAADRRMSDHAPVVVDYDF 304 >gi|153812982|ref|ZP_01965650.1| hypothetical protein RUMOBE_03389 [Ruminococcus obeum ATCC 29174] gi|149830929|gb|EDM86019.1| hypothetical protein RUMOBE_03389 [Ruminococcus obeum ATCC 29174] Length = 252 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 81/304 (26%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N + + LDADI LQE ++ Sbjct: 1 MKCISWNVNGIRACITKGFEDR---------------FRELDADIFCLQETKCQQGQVEL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +N ++ AV K + ++ + D R Sbjct: 46 -ELPGYHQYWN----------YANRRGYSGTAVFTKKEPISVKNGIGIEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + K+ + + ++ + L++ Sbjct: 91 -----VITLEFKEFYFVTVYTPNSQSELRRLEYRMEWERDFLAYLLKLQE--------SK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + + F + Sbjct: 138 PVICCGDLNVAHEEIDLKNPKTNRKNAGFTDEERACFTKVLESGFIDTFRYFYPDKEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ + + L + + SDHCPI Sbjct: 198 SWWSYRFKAREKNAGWRIDYFITSPSLKEKLQGAAIHTEI-----------MGSDHCPIE 246 Query: 300 IDYD 303 +D D Sbjct: 247 LDID 250 >gi|282880539|ref|ZP_06289246.1| endonuclease/exonuclease/phosphatase family protein [Prevotella timonensis CRIS 5C-B1] gi|281305642|gb|EFA97695.1| endonuclease/exonuclease/phosphatase family protein [Prevotella timonensis CRIS 5C-B1] Length = 361 Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 41/307 (13%), Positives = 93/307 (30%), Gaps = 71/307 (23%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + ++++S+N+ + E + Y + +ADIV LQE + Sbjct: 95 EAPPHAIKVLSYNVWYFAGWEDKGKANP-----------ILTYLRAQNADIVCLQEAETT 143 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + I+ + + D +A+ K + +++ + Sbjct: 144 EVGKERIEAALNPIYSFHDFSLTEKGSD-------RMAIYSKFPILKKEAIHYPSEGNHS 196 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKS------------------------FCFLDSL 173 + ++I G + V++ HL+S SL Sbjct: 197 TAFF--------LDIKGDTVIVINNHLESIGLTEEDKDSFKGMVKGELETDSIKIGSKSL 248 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + + + + + QA+ + +I Q ++ ++ GDFN N K + Sbjct: 249 YHKLANATKIRAPQAKAVAQYIEQHQDKT--IILCGDFNDGPNS-FARRTIAKHLRD--- 302 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + + + + ID + +N + + S Sbjct: 303 --CYIETGNGPGISYHLGGFYVRIDQLMCSKNLKPY-------------HCQVDNKIKTS 347 Query: 294 DHCPISI 300 DH PI Sbjct: 348 DHYPIYC 354 >gi|294851237|ref|ZP_06791910.1| exodeoxyribonuclease III [Brucella sp. NVSL 07-0026] gi|294819826|gb|EFG36825.1| exodeoxyribonuclease III [Brucella sp. NVSL 07-0026] Length = 268 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 79/306 (25%), Gaps = 68/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +WNIN L+ Q+ ++ D++ LQE + Sbjct: 3 FSIATWNIN----------------SVRLRMPLVEQFLRDYQPDVLCLQETKCP---DDL 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + S + +A + + D Sbjct: 44 FPAKGFRAL------GYEHIAISGQKGYHGVATVSRRPLDGVEKVDFCNMGDCRH----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +VE +K+ + + ++ + D + +P + + ++ I +K+ Sbjct: 93 --LSAVVEAGDRKLRIHNFYVPAG--GDEPDPEINPKFAHKLAFLEKMRAIIADRKD-GC 147 Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247 ++ GD N N + ++ K + + Sbjct: 148 SSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRIKGGWSDLMRHLIAADQKI 207 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + R SDH P Sbjct: 208 YTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG-------LQVLRDARGWDRPSDHVP 260 Query: 298 ISIDYD 303 + +D Sbjct: 261 VIATFD 266 >gi|295835706|ref|ZP_06822639.1| exodeoxyribonuclease III [Streptomyces sp. SPB74] gi|295825643|gb|EDY45706.2| exodeoxyribonuclease III [Streptomyces sp. SPB74] Length = 262 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 74/305 (24%), Gaps = 70/305 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+ +WN+N T+ L + ++ D++ +QE + Sbjct: 3 DMRIATWNVN----------------SITARLPRLLAWLESSGTDVLCVQETKTTAE--- 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 R + + +AV + S L G Sbjct: 44 -------GFPTEALREAGYESAVNATGRWNGVAVISRAGLDDVVSG-LPGQPAYDGVMEP 95 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + V +++ + + Y + + L+ + Sbjct: 96 RA-----LGATCGPVRVWSVYVPNGREVGHPHYAYK------LEWLEALRTAVADDAAGA 144 Query: 203 VPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247 PF + GD+N D + P+ Sbjct: 145 RPFAVLGDYNVAPGDEDVYDPAVFEGLTHVTPPEREALAKLRATGLGDLVPRPLKYD-RP 203 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID + D + +GK SDH P+ Sbjct: 204 YTYWDYRQLAFPKNRGMRIDLVYANAAFRTAAKGAYV-------DREERKGKGASDHAPV 256 Query: 299 SIDYD 303 +D + Sbjct: 257 VVDLE 261 >gi|115396906|ref|XP_001214092.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114193661|gb|EAU35361.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 426 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 90/305 (29%), Gaps = 31/305 (10%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M + LA + P A+ + + ++S+N+ L E + + + Sbjct: 1 MRAFWYLAGI---SPALAASSGQFNVLSFNVAGLPEIFNSNEVPGDKSTNS---EQIGTK 54 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 D++ +QE +Y+A + R + ++T Sbjct: 55 FAEYGYDVIHVQEDFNYHA-------YIYKTDNHPYRTATSGGAGIGSGLNT--LANYPW 105 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSP 179 V + + + + V + G + ++H + D + + Sbjct: 106 VDFERVKWATCSDASGADCLTPKGFTAMRVRFDEGFYVDFYNLHADAGSETDDVSARSAN 165 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 Q L D+I + P ++ GD N + G N ++T + + Sbjct: 166 --------LQQLADYIDTN-SAGNPVMVFGDTNARYTSAGENIRVFETQEGMSNPAPTRG 216 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 +D + L + + S G LSDH PIS Sbjct: 217 SARIPRRTRT----CETVDKIFYRGSRAVDLKAVYWD--YVGTKFLSSNGTILSDHNPIS 270 Query: 300 IDYDF 304 + + Sbjct: 271 SNITW 275 >gi|3859723|emb|CAA21997.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Candida albicans] Length = 589 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 88/327 (26%), Gaps = 42/327 (12%) Query: 18 ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + ++S+N + + + + LL + N + DIV +QE+ Sbjct: 252 PESSDNFTVLSYNTLCQHYATPKMYKFTPSWALQWDYRKNLLEKEVLNYNTDIVCMQEVE 311 Query: 76 SYNAVAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY--- 128 + P T F+S R S+ DS A + ++ + Sbjct: 312 TKTFQEFWLPVMTANGYKGYFFSKTRSKTMSETDSKKVDGCATFFKNDKFSLVHKQNFEY 371 Query: 129 --------PLLGAKDSFSRAGNR----RAVELLVEINGKKIWVLDIHLKSFC-FLDSLEN 175 KD F+R N+ L + +G+KI V++ HL F D Sbjct: 372 NSVCMGSDKYKKTKDLFNRFMNKDNIALISYLQHKESGEKIAVVNTHLHWDPAFNDVKAL 431 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN------DDFWKTID 229 L + + + + V+ GDFN + + ++ Sbjct: 432 QVGILLEELQGIIKKYRHTNSNEDIKNSSIVVCGDFNSVKDSAVYQLFSTGASKGHEDMN 491 Query: 230 PNDSLIRFPKEKDSRC-------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESF 275 D N IDY + Sbjct: 492 GRDYGKFTEDGFHHPFKLKSAYEAVGELPFTNLTPAFTDNIDYIWYSTPTLQVKGLLGRV 551 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 E + SDH PI + Sbjct: 552 DEEYTSHSIGFPDANFPSDHVPILAKF 578 >gi|325860217|ref|ZP_08173342.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola CRIS 18C-A] gi|325482304|gb|EGC85312.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola CRIS 18C-A] Length = 366 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 81/302 (26%), Gaps = 69/302 (22%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAV 80 ++++S+N+ S +N + Y ADIV LQE S Sbjct: 99 GSIKVLSYNVFMFSIWSEPGGEQNP----------IVDYILKSKADIVCLQEAQASMEGT 148 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +++P Y + D + + + + Q S P + Sbjct: 149 DRIYPALKKHYPYFRLMVKKKPGADH-------MVLLSRYPVLWQDSIPYGSNSNQSVAY 201 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS------------------ 182 V+I G K V++ HL+S + + Sbjct: 202 M--------VDIKGTKTLVVNNHLESNGLSTDDKEEFKTLVKGNMGTGEAKDESFHLLRK 253 Query: 183 ------LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + QA+ + ++ + + VP ++ GDFN + + Sbjct: 254 LGSVSVRRAPQAEAVARYVRKYLDRKVPVILCGDFNDSPLSYTHRTIVR------ELTDC 307 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + + ID+ + SDH Sbjct: 308 YVASGNGPGISYHKSGMYFRIDHIFCSDDF----EPYGAKVDNSVT---------ASDHY 354 Query: 297 PI 298 PI Sbjct: 355 PI 356 >gi|86140867|ref|ZP_01059426.1| hypothetical protein MED217_16985 [Leeuwenhoekiella blandensis MED217] gi|85832809|gb|EAQ51258.1| hypothetical protein MED217_16985 [Leeuwenhoekiella blandensis MED217] Length = 315 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 87/320 (27%), Gaps = 49/320 (15%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSV-----------KRTTSDYTLLRQYAKNLD---- 65 + K+ L +N+ L + ++ +R T L + + Sbjct: 3 STKLTLAFYNLENLFDTLKDPNILDADFTPHGGLKWNHERYTQKLNGLAKTIAQVGKAET 62 Query: 66 ---ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNV 121 ++ + E+ + + + N I TA+ + + Sbjct: 63 GQAPALIGVAEVENKKVLNDLLQTEALHTMNYDFIHHNSPDE---RGIDTALLYDKNRFE 119 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + +SY L R R + + ++ G ++VL H S ++ + Sbjct: 120 VLESRSYSLHLQTAQGVRDFTRDILYVEGKLAGVPVFVLVNHWPSRGEGVAISEPKRIAA 179 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + + + + I + + +I GDFN + D T N + + Sbjct: 180 AERN---REIIQDIQAR-DPEARILIMGDFNDDPQSIAVRDHLVSTDFYNPMVFLLTRYA 235 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ-------------------ESFSEILYNE 282 S + D ++ N K + Sbjct: 236 GSLNHRGDWYLF----DQIILSPNWMKAYDNPLEYEKSAIYNPEYLKEQEGKYRGNPLRT 291 Query: 283 DDIKSRGKRLSDHCPISIDY 302 LSDH P+ + Sbjct: 292 YAGDKYLGGLSDHFPVYTIF 311 >gi|90577495|ref|ZP_01233306.1| endonuclease/exonuclease/phosphatase family protein [Vibrio angustum S14] gi|90440581|gb|EAS65761.1| endonuclease/exonuclease/phosphatase family protein [Vibrio angustum S14] Length = 352 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 106/343 (30%), Gaps = 55/343 (16%) Query: 14 VPCTASVAQKVRLVSWNI-NTLSEQEGVSLWKN--SVKRTTSDYTLLRQYAKNLDADIVF 70 P ++++ S+N+ N L+ ++N S ++ L + DI+ Sbjct: 9 FPLVPIAQSEIKIASFNLLNYLAPPNAYYDFENIYSYEQWHKKQHWLTSILEAQQPDIIG 68 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE+ S + + + + +++ AIA + V+ + Sbjct: 69 FQEVFSADDLQSLLRDIGYP-YFAVVDEPIVEGDFIYRSPVVAIASKFPITEVIAVEADI 127 Query: 131 LGAKDSFS--RAGNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 A+ + +R+ + V+I +V + K F D L T + S S L+ Sbjct: 128 EAAQLMGWAEFSFSRKPLRATVDIPHIGATDCYVTHLKSKRSLFDDPLPETITKSGSALA 187 Query: 186 QQA-QWLKDW-----------------ITQKKESLVPFVIAGDFNRKINYLGNNDD---- 223 Q L +W + +++++ P V+ GD+N I+ + Sbjct: 188 SFLGQRLGNWGSSMLRGTEAALLQLAMVKRREQTSNPMVLCGDYNDVISSSCLEELTASR 247 Query: 224 -----------FWKTIDPNDSLIRFPKEKDSRCN-----ANKNLRNKIPIDYFVMDQNAY 267 D + + + +DY ++ Q Sbjct: 248 VYGMSESDTERLINFYCLYDGWQLYTQVNPQDEEAIRPATHYFNGKGSVLDYILLSQEFN 307 Query: 268 KFLIQESFSEILYNEDD------IKSRGKRLSDHC-PISIDYD 303 + F Y+ +D +DH PI + Sbjct: 308 ASYLGSLFEVSHYHTEDKHLVNSSFDIDGYSTDHAIPI-VTLS 349 >gi|256158498|ref|ZP_05456396.1| exodeoxyribonuclease III [Brucella ceti M490/95/1] gi|256253917|ref|ZP_05459453.1| exodeoxyribonuclease III [Brucella ceti B1/94] gi|261221054|ref|ZP_05935335.1| exodeoxyribonuclease III Xth [Brucella ceti B1/94] gi|265997015|ref|ZP_06109572.1| exodeoxyribonuclease III Xth [Brucella ceti M490/95/1] gi|260919638|gb|EEX86291.1| exodeoxyribonuclease III Xth [Brucella ceti B1/94] gi|262551483|gb|EEZ07473.1| exodeoxyribonuclease III Xth [Brucella ceti M490/95/1] Length = 268 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 78/306 (25%), Gaps = 68/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +WNIN L+ Q+ ++ D++ LQE + Sbjct: 3 FSIATWNIN----------------SVRLRMPLVEQFLRDYQPDVLCLQETKCP---DDL 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + S + +A + + D Sbjct: 44 FPAKGFRAL------GYEHIAISGQKGYHGVATVSRRPLDGVEKVDFCNMDDCRH----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +VE +K+ + + ++ + D + +P + + ++ I +K+ Sbjct: 93 --LSAVVEAGDRKLRIHNFYVPAG--GDEPDPEINPKFAHKLAFLEEMRAIIADRKD-GC 147 Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247 ++ GD N N + ++ K + + Sbjct: 148 SSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRIKGGWSDLMRHLIAADQKI 207 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + R SDH P Sbjct: 208 YTWWSYRAKDWDAADRGRRLDHVWGSADLES-------HIKGLQVLRDARGWDRPSDHVP 260 Query: 298 ISIDYD 303 + +D Sbjct: 261 VIATFD 266 >gi|189184108|ref|YP_001937893.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda] gi|189180879|dbj|BAG40659.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda] Length = 264 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 80/305 (26%), Gaps = 68/305 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+++++WNIN + L Q + DI+ LQE+ + Sbjct: 4 KLKILTWNIN----------------SIRARAYQLNQLISDTQPDIILLQEIKCES---- 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 F ++ + + +A+ K + L +R Sbjct: 44 -----HNFPFQEINESHKYNFSINGQKSYNGVAILSKFPLEDIKFSFLGNPCPDQARF-- 96 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +E + V+ I++ + ++S + ++ K Sbjct: 97 ---IEANCLTEVGYVKVISIYVPNGGEVNS------DKFQIKLLFIDEFIKYLHSSKNLG 147 Query: 203 VPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247 ++ GDFN + + ++ + + + Sbjct: 148 ESIILGGDFNVAPYDNDVYSAIELQNTTCFTLPEKQYIRKLINHNFIDIYRLFHQRQKK- 206 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + IDY + + D R SDH P+ Sbjct: 207 FTWWDYRAGAFERNLGMRIDYILCTISIALKATDCYI-------DYHTRNNHRASDHAPV 259 Query: 299 SIDYD 303 ++ Sbjct: 260 IASFE 264 >gi|256546090|ref|ZP_05473443.1| endonuclease/exonuclease/phosphatase family protein [Anaerococcus vaginalis ATCC 51170] gi|256398207|gb|EEU11831.1| endonuclease/exonuclease/phosphatase family protein [Anaerococcus vaginalis ATCC 51170] Length = 348 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 37/321 (11%), Positives = 98/321 (30%), Gaps = 60/321 (18%) Query: 18 ASVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 + + +++WNI G ++ + + +K +++DI Sbjct: 49 PEIGKSYTIMTWNIGYGGLDKDTDFFMDGGKMVFPINKSHVEKSINHIINSSKKINSDIK 108 Query: 70 FLQEMG-----------SYNAVAKVFPK----NTWCIFYSTERLINHSKRDSNNDIHTAI 114 F QE+ K+ + + + K +S T Sbjct: 109 FFQEVDINSKRTYHINEYEKIRKKLLGNTTFALNFKAAFIPYPIPPMGKVESGIMTQTNF 168 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++K + + + RA N + ++ + KK+ ++++HL ++ ++ Sbjct: 169 KIQKSKRYQQEIPHKFPSRLVNLKRAFN--PSYIDIKNSDKKLVIVNVHLDAYEKGNNG- 225 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG-------------NN 221 Q + + +++ ++ + ++ GDFN+++ Sbjct: 226 ---------RIAQTKEIINFVNKEYKKGNYVIVGGDFNQELTGNYKELPEGIWNPKILPK 276 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + + I + + K ID F+ N Sbjct: 277 ELLTENIKLYYDKNGETSVVNDKPYTGK-DAYLSTIDGFMATDNIKIK-----------T 324 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 + + SDH P+ +++ Sbjct: 325 IKTQEKENFQYSDHNPVVMEF 345 >gi|237738747|ref|ZP_04569228.1| exodeoxyribonuclease III [Fusobacterium sp. 2_1_31] gi|294781992|ref|ZP_06747324.1| exodeoxyribonuclease III [Fusobacterium sp. 1_1_41FAA] gi|229423850|gb|EEO38897.1| exodeoxyribonuclease III [Fusobacterium sp. 2_1_31] gi|294481803|gb|EFG29572.1| exodeoxyribonuclease III [Fusobacterium sp. 1_1_41FAA] Length = 253 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 83/305 (27%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + + Y +ADI LQE +A Sbjct: 1 MKLISWNVNGIRA---------------AIKKGFLDYFNEQNADIFCLQETK-LSAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + G R Sbjct: 45 LELKGYHQYWNYAEKKGY----------SGTAIFTKEEPLSVS----YGLGIEEHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +K +++ ++ + + ++ ++ Sbjct: 91 -----VITLEFEKFYMITVYTPN-------SKDELLRLDYRMVWEDEFRKYLKNLEKKK- 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + + + F +A Sbjct: 138 PVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKFTELLESGFIDTFRYFYPDLEHAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + K+L+ SDHCP+ Sbjct: 198 SWWSYRANARKNNTGWRIDYFVVSKALEKYLVDAEIHAQT-----------EGSDHCPVV 246 Query: 300 IDYDF 304 + DF Sbjct: 247 LFLDF 251 >gi|333030586|ref|ZP_08458647.1| exodeoxyribonuclease III Xth [Bacteroides coprosuis DSM 18011] gi|332741183|gb|EGJ71665.1| exodeoxyribonuclease III Xth [Bacteroides coprosuis DSM 18011] Length = 253 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 32/297 (10%), Positives = 81/297 (27%), Gaps = 73/297 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V++N+N L L ++ + D+V +QE Sbjct: 1 MKIVTYNVNGLRAATTKGLP---------------EWLAETNPDVVCIQETK-------- 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + ++ +A+ K + G R Sbjct: 38 LQPDQYPAEPYEALGYKSYLYSAQKKGYSGVAILTKVEP----DHVEYGMGIEAYDNEGR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + V+ ++ S D+ ++ Q ++++ + +++ Sbjct: 94 F-----IRADFGDLSVVSVYHPSGTSGDARQD-------FKMQWLSDFQNYVLELRKTRP 141 Query: 204 PFVIAGDFNRKINYLGNNDD--------------FWKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GD+N + +D W T + + + Sbjct: 142 NLILCGDYNICHEEIDIHDPKGNAKNSGFLPEERAWMTSFLDTGFSDSFRRFHAETQKYT 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDY ++ A ++ SDHCP Sbjct: 202 WWSYRFKARSKNKGWRIDYCMVSDEAKDRVVDAWI-----------DNDAVHSDHCP 247 >gi|228910912|ref|ZP_04074721.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 200] gi|228848863|gb|EEM93708.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 200] Length = 352 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 46/327 (14%), Positives = 109/327 (33%), Gaps = 70/327 (21%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T ++ + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMG----------SYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAI 114 LQE+ + + K P + + + N + Sbjct: 110 LQEVDIKSLRSFDVNGHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYA-----EAGL 164 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLD 171 + K + + L G + R + R VE + +N GK + ++++HL + Sbjct: 165 STFSKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA----- 219 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 Y + QQ ++LK+++ + E+ ++ GD+N+ ++ +D + P Sbjct: 220 -----YDEGGKIRKQQVEYLKEYMNKHYENGDYVIMGGDWNQLVSNAQLSDPKFVKERPE 274 Query: 232 DSLIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESF 275 + D + ID F++ N ++ Sbjct: 275 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQG 332 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + SDH P+S + Sbjct: 333 KDLKFEN----------SDHNPVSAVF 349 >gi|21233468|ref|NP_639385.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770432|ref|YP_245194.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. 8004] gi|188993642|ref|YP_001905652.1| Exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. B100] gi|21115315|gb|AAM43267.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575764|gb|AAY51174.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. 8004] gi|167735402|emb|CAP53617.1| Exodeoxyribonuclease III [Xanthomonas campestris pv. campestris] Length = 259 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 85/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ SWN+N+L+ L+Q+ + D+V +QE + + Sbjct: 1 MKIASWNVNSLN----------------VRLPHLQQWLADFAPDVVGIQETKLEDHKFPD 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + +A+ ++ + Q F Sbjct: 45 AALAALGYRSVFC------------GQKTYNGVAILSRSPALEVQ-----MGIPGFDDVQ 87 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + ++++++ + + + + Y + + + DWI Q+ + Sbjct: 88 QRVIAATV-----DGVRIINLYVVNGQDVGTDKYAYK------LRWLEAVHDWIAQELQR 136 Query: 202 LVPFVIAGDFNRKINYLGNND---DFWKTIDPND------------SLIRFPKEKDSRCN 246 V+ GDFN + + I + L + Sbjct: 137 HPQLVVLGDFNIAPDARDVYEPEVWSDNHILTSTAERGALHKLLALGLHDAFRLHHDDAG 196 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID ++ ++ D +R SDH P Sbjct: 197 HFSWWDYRQAAYRRNLGLRIDLTLVSDALRARAVEAGI-------DREPRTWERPSDHAP 249 Query: 298 ISIDY 302 + Sbjct: 250 AWVRL 254 >gi|223982521|ref|ZP_03632759.1| hypothetical protein HOLDEFILI_00033 [Holdemania filiformis DSM 12042] gi|223965496|gb|EEF69770.1| hypothetical protein HOLDEFILI_00033 [Holdemania filiformis DSM 12042] Length = 1904 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 94/321 (29%), Gaps = 70/321 (21%) Query: 2 IRKYVLALVFF--------------LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV 47 ++K + L L + +R+ +WNI Sbjct: 1 MKKLLSFLAALVTALTVIVPSQATPLFAQSPEAPVTLRVGTWNI---------------A 45 Query: 48 KRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNAVAKVFPKNTWCIFYSTERLINHSKR 104 D + + +++ +QE+ + N + + + + ++ Sbjct: 46 ANKHPDLAAMSNVIAENNIEVLAVQEVDMFNNRNNIDMMAGLTSTKLVHTDFAKFR---- 101 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164 I + + + PL +++ + A ++VE +GK+I + ++HL Sbjct: 102 -DYEGGEFGIGFVSQYPILKSSASPL----ETYELEATKVAQRIVVEKDGKQIALYNVHL 156 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 + + L Q L + I + + VI GDFN + + Sbjct: 157 SAQTP------KQMTARELRQVQMAQLAEQIAN--DPVEYKVIMGDFNTDQDTYEFSRLL 208 Query: 225 --WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + + +D D F + + Sbjct: 209 DYFNMANGHDDQWLRTYWPDDD-------------------PAMKVFAVDNILATKNIEI 249 Query: 283 DDIKSRGKRLSDHCPISIDYD 303 D+IK +LSDH ++ D Sbjct: 250 DNIKVVNNKLSDHYMLTADLT 270 >gi|167762675|ref|ZP_02434802.1| hypothetical protein BACSTE_01033 [Bacteroides stercoris ATCC 43183] gi|167699015|gb|EDS15594.1| hypothetical protein BACSTE_01033 [Bacteroides stercoris ATCC 43183] Length = 370 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 43/317 (13%), Positives = 91/317 (28%), Gaps = 69/317 (21%) Query: 14 VPCTASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 VP TA + + + ++N++ + T + +Y + Sbjct: 97 VPATAPAPNRQGKNSGYLTVATYNVHNFG-----------NEITGYSCKQIAKYMQQQHV 145 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D++ QE F +N S R ++H + + +R + Sbjct: 146 DVLCFQE----------FGENKHFTADSLRRALSHWQYAIIPADDS---IRGILPIAVFS 192 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE--------NTYS 178 YPL+G + ++ + +N I +L+ HL++ + + + Sbjct: 193 RYPLIGGRFITYPHSANCSMLCDIILNTDTIRLLNNHLQTTSVSQNRKKWERELAADNTR 252 Query: 179 PSCSLLSQQAQWLKD-----------WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 + A+ L + S P ++ GDFN + + F ++ Sbjct: 253 REAQAVQDAAETLHENFVKRAFQTDSICQLATASPHPVLVCGDFNSLPSSYTYHR-FSES 311 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + F + + + IDY D Sbjct: 312 LKDG-----FKTGGHGYMYTYRYGKRMLRIDYAFHSPELEC-------------TDYYSP 353 Query: 288 RGKRLSDHCPISIDYDF 304 SDH P+ + Sbjct: 354 NLDLCSDHNPVIFTVKY 370 >gi|83747941|ref|ZP_00944972.1| dioxygenase [Ralstonia solanacearum UW551] gi|207743451|ref|YP_002259843.1| metal-dependent hydrolase protein [Ralstonia solanacearum IPO1609] gi|83725359|gb|EAP72506.1| dioxygenase [Ralstonia solanacearum UW551] gi|206594848|emb|CAQ61775.1| metal-dependent hydrolase protein [Ralstonia solanacearum IPO1609] Length = 289 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 84/305 (27%), Gaps = 50/305 (16%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAKVF 84 +++WNI +G D + A + DI+ LQE+ S Sbjct: 5 ILTWNIQWGRGADG-----------RVDLPRMLAEAHAMGPFDILCLQEITSGFGHLPGQ 53 Query: 85 PKNTWCIFYSTERLINHS--------KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 P + + + + + A+ + + + L D+ Sbjct: 54 PGDDQWRELAGTLGPAFTLIDGIALERHEGTRIQRFGNAIVTRLPVLHVARHALPCPADT 113 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A+E V+ + V+ HL+ + + + + + Sbjct: 114 SP-TMPRMAIEATVQAPFGPLRVISTHLEYYSETQRIAQIDALRALHVEGWMRAAHPPTL 172 Query: 197 QKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + + PF VI GDFN K + +L + Sbjct: 173 GPEPADGPFRPLAQTHATVICGDFNCKPDSTPKRLATVPFSHETATLYDAWEVAHGTAPQ 232 Query: 248 NKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 D+ ++ + + + + + + SDH P+ Sbjct: 233 PPTFGVHDRTGWTEPAYACDFMLVSEPLKTRVARVEVNSVT-----------QASDHQPM 281 Query: 299 SIDYD 303 ++ + Sbjct: 282 LLELN 286 >gi|257883889|ref|ZP_05663542.1| AP endonuclease [Enterococcus faecium 1,231,501] gi|257819727|gb|EEV46875.1| AP endonuclease [Enterococcus faecium 1,231,501] Length = 250 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 75/303 (24%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + + LDAD LQE A Sbjct: 1 MKFISWNVNGLRAIVNKNF---------------LEVFHELDADFFCLQETK-LQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + + D+ R Sbjct: 45 LDLPGYYQYWN----------YAERKGYSGTAIFAKKPALNATYGMGIDIHDTEGRL--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +++ + + + + L + Sbjct: 92 ------ITLEYSDFFLVTCYTPNSQSELKRLDYRLEWEEAFYNYLENL--------KKQK 137 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P +I GD N + + N + F ++ Sbjct: 138 PVIICGDLNVAHQTIDLKNWKTNQKNAGFTPEERAALSRLLDNGFVDTFRYFYPTQEGVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ ++ L SDHCP+ Sbjct: 198 SWWNYRFNSRKNNAGWRIDYFLASKDLEPRLADAKIHT-----------DIMGSDHCPVE 246 Query: 300 IDY 302 +D Sbjct: 247 LDL 249 >gi|229002991|ref|ZP_04160856.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17] gi|228758256|gb|EEM07438.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17] Length = 354 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 109/318 (34%), Gaps = 64/318 (20%) Query: 21 AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++ + ++NI G +S ++T + + + + + D+D + +Q Sbjct: 54 GEEFKATTFNIGYGGLDKDQDFFLDGGTGSRSSSKEQTEKNISNMLSFLQKEDSDFILVQ 113 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-------------KK 119 EM + + F N + F + + + N + ++ K Sbjct: 114 EMDEKSL--RSFDVNQYKAFQDGLKDHASTFGYNFNAQWVPVPIKKPHGYTNSGLGSFSK 171 Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENT 176 Y L G + + R VE V + NGK + ++++HL ++ + Sbjct: 172 YKVEEVTRYQLPGREMWLRQLFELDRAIVEHKVPVDNGKYLRMVNVHLSAYDKGGN---- 227 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + QQ ++LK+++ + ++ V+ GD+N+ ++ + D +K P + Sbjct: 228 ------IRKQQVEFLKEYMNRHYKNGDYLVLGGDWNQLLSDVQLKDPKFKEEWPEWLVQL 281 Query: 237 FPKEKDSRCNANKNL----------------RNKIPIDYFVMDQNAYKFLIQESFSEILY 280 D + ID F++ N ++ ++ + Sbjct: 282 PEDFTDGGFQWAVDDTVWTVRDNVKSYVEDENFVTIIDGFLVSPN--VEIVSVQGHDLKF 339 Query: 281 NEDDIKSRGKRLSDHCPI 298 SDH P+ Sbjct: 340 EN----------SDHNPV 347 >gi|229009363|ref|ZP_04166629.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4] gi|228751907|gb|EEM01668.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4] Length = 354 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 109/318 (34%), Gaps = 64/318 (20%) Query: 21 AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++ + ++NI G +S ++T + + + + + D+D + +Q Sbjct: 54 GEEFKATTFNIGYGGLDKDQDFFLDGGTGSRSSSKEQTEKNISNMLSFLQKEDSDFILVQ 113 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-------------KK 119 EM + + F N + F + + + N + ++ K Sbjct: 114 EMDEKSL--RSFDVNQYKAFQDGLKDHASTFGYNFNAQWVPVPIKKPHGYTNSGLGSFSK 171 Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENT 176 Y L G + + R VE V + NGK + ++++HL ++ + Sbjct: 172 YKVEEVTRYQLPGREMWLRQLFELDRAIVEHKVPVDNGKYLRMVNVHLSAYDKGGN---- 227 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + QQ ++LK+++ + ++ V+ GD+N+ ++ + D +K P + Sbjct: 228 ------IRKQQVEFLKEYMNRHYKNGDYLVLGGDWNQLLSDVQLKDPKFKEEWPEWLVQL 281 Query: 237 FPKEKDSRCNANKNL----------------RNKIPIDYFVMDQNAYKFLIQESFSEILY 280 D + ID F++ N ++ ++ + Sbjct: 282 PEDFTDGGFQWAVDDTVWTVRDNVKSYVEDENFVTIIDGFLVSPN--VEIVSVQGHDLKF 339 Query: 281 NEDDIKSRGKRLSDHCPI 298 SDH P+ Sbjct: 340 EN----------SDHNPV 347 >gi|311064847|ref|YP_003971573.1| calcineurin-like phosphoesterase [Bifidobacterium bifidum PRL2010] gi|310867167|gb|ADP36536.1| Calcineurin-like phosphoesterase [Bifidobacterium bifidum PRL2010] Length = 1597 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 54/373 (14%), Positives = 96/373 (25%), Gaps = 88/373 (23%) Query: 14 VPCTASVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSD------------------- 53 P A+V +RL ++N+ N S + S T D Sbjct: 508 TPDLAAVGGDIRLATFNVLNYFSTTADKTGCSTSNAYTDRDGNPVTAKNCDVRGAWDKAN 567 Query: 54 ----YTLLRQYAKNLDADIVFLQEMGSY------------------------NAVAKVFP 85 + + NL AD+V L+E+ + +A+ + Sbjct: 568 MERQRAKIVKAINNLGADVVSLEEIENSAKAASSVPASFKGERRDYALATLVDALNEQAG 627 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV-------RVLQQSYPLLGAKDSFS 138 + TW S + + + D I TA + V + Sbjct: 628 EGTWAYVPSPQTVPDLDVEDV---IRTAFIYKPTKVATVGATRILTDSDAFNGKNGYEHG 684 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-----PSCSLLSQQAQWLKD 193 R + +A + + V+ H KS + N + QA L Sbjct: 685 RQPDAQAFKAKGAADSDAFLVVANHFKSKGSASNALNQDPGDGSGNADYTRQAQADALLA 744 Query: 194 WITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK-- 249 + + K L + GDFN + ++ A Sbjct: 745 FTDEVKSDLKLEKVFLVGDFNAYYAEKPIQKIVAAGYTD--LSEQVSEKTGKYTYAYTVK 802 Query: 250 -----NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK-------------- 290 +D+ ++ A + + I E + Sbjct: 803 DESGNTNGGVGSLDHIFANEAAMRSVTGADIWNINSVESVALEYSRYNYNAKNLYQADQF 862 Query: 291 RLSDHCPISIDYD 303 R SDH P+ I Sbjct: 863 RASDHDPVIIGIS 875 >gi|255006791|ref|ZP_05145392.2| phospholipase C [Staphylococcus aureus subsp. aureus Mu50-omega] Length = 274 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 83/278 (29%), Gaps = 28/278 (10%) Query: 43 WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE------ 96 + N + +D Y K + D+V E A K+ Y T Sbjct: 2 YPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQ 59 Query: 97 --RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 S +A+ K + + F N+ V +E NG Sbjct: 60 SGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNG 118 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNR 213 K + V+ H +S DS + + ++Q + + D++ + I GD N Sbjct: 119 KNVHVIGTHTQS---EDSRCGAGN-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNV 174 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK 268 D K ++ ND L N +DY D++ + Sbjct: 175 N-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQ 233 Query: 269 --FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300 L+ E +E D + SDH PI Sbjct: 234 PKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 271 >gi|226940627|ref|YP_002795701.1| Endonuclease/exonuclease/phosphatase [Laribacter hongkongensis HLHK9] gi|226715554|gb|ACO74692.1| Endonuclease/exonuclease/phosphatase [Laribacter hongkongensis HLHK9] Length = 237 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 38/263 (14%), Positives = 75/263 (28%), Gaps = 38/263 (14%) Query: 46 SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE------RLI 99 S + + + LDAD++FLQE+ +++ I R Sbjct: 2 SPLNRKVNLVGIANELEGLDADLLFLQEVQGRHSLRARHKAGYLDIPQHDYIAGRLDRHA 61 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + H A+ + + L S +R +R + +++ G V Sbjct: 62 VYGLNAGYGYGHHGNAILTRFPIRQWCNLDL-----SVNRLESRGVLHCDIKLPGWPCEV 116 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 + + F +Q + L +I + ++AGDFN Sbjct: 117 TALCIHLNLFGHD-----------RRKQMEQLSRYIERAVPRGNGLILAGDFND-----W 160 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 + D + + +D + +I+ Sbjct: 161 RRRANHEFADELGLQEVHEAVHGRHGKSFPARLPILTLDRIYVRG-----------LQIV 209 Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302 E + LSDH P+S + Sbjct: 210 GAEVLRGAPWATLSDHLPLSAEL 232 >gi|224283762|ref|ZP_03647084.1| 5'-Nucleotidase domain protein [Bifidobacterium bifidum NCIMB 41171] gi|313140916|ref|ZP_07803109.1| 5'-Nucleotidase domain-containing protein [Bifidobacterium bifidum NCIMB 41171] gi|313133426|gb|EFR51043.1| 5'-Nucleotidase domain-containing protein [Bifidobacterium bifidum NCIMB 41171] Length = 1597 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 54/373 (14%), Positives = 96/373 (25%), Gaps = 88/373 (23%) Query: 14 VPCTASVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSD------------------- 53 P A+V +RL ++N+ N S + S T D Sbjct: 508 TPDLAAVGGDIRLATFNVLNYFSTTADKTGCSTSNAYTDRDGNPVTAKNCDVRGAWDKAN 567 Query: 54 ----YTLLRQYAKNLDADIVFLQEMGSY------------------------NAVAKVFP 85 + + NL AD+V L+E+ + +A+ + Sbjct: 568 MERQRAKIVKAINNLGADVVSLEEIENSAKAASSVPASFKGERRDYALATLVDALNEQAG 627 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV-------RVLQQSYPLLGAKDSFS 138 + TW S + + + D I TA + V + Sbjct: 628 EGTWAYVPSPQTVPDLDVEDV---IRTAFIYKPTKVATVGATRILTDSDAFNGKNGYEHG 684 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-----PSCSLLSQQAQWLKD 193 R + +A + + V+ H KS + N + QA L Sbjct: 685 RQPDAQAFKAKGAADSDAFLVVANHFKSKGSASNALNQDPGDGSGNADYTRQAQADALLA 744 Query: 194 WITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK-- 249 + + K L + GDFN + ++ A Sbjct: 745 FTDEVKSDLKLEKVFLVGDFNAYYAEKPIQKIVAAGYTD--LSEQVSEKTGKYTYAYTVK 802 Query: 250 -----NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK-------------- 290 +D+ ++ A + + I E + Sbjct: 803 DESGNTNGGVGSLDHIFANEAAMRSVTGADIWNINSVESVALEYSRYNYNAKNLYQADQF 862 Query: 291 RLSDHCPISIDYD 303 R SDH P+ I Sbjct: 863 RASDHDPVIIGIS 875 >gi|68171888|ref|ZP_00545213.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Ehrlichia chaffeensis str. Sapulpa] gi|67998687|gb|EAM85414.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Ehrlichia chaffeensis str. Sapulpa] Length = 281 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 41/318 (12%), Positives = 87/318 (27%), Gaps = 78/318 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++ +WN+N L + N DI LQE+ + Sbjct: 2 TLKIATWNVN----------------SIRKRLDHLCNWLINSAIDIALLQEIKCTDE--- 42 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV-------------LQQSYP 129 + + + +A+ + V + Y Sbjct: 43 -------QFPFFDVESLGYKCYVHGQKARNGVAIITRYPIVGELVTSIFSSDYKSKLCYE 95 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 L ++ +R +E +V + KI + I++ + +DS + Sbjct: 96 LSSENFIYNCDESRY-LECVVLHHNIKIRIASIYVPNGQSIDS------DAFQYKLGFFD 148 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSL 234 L++ + + ++ GD+N + D +++I N Sbjct: 149 QLREHVLSLLKKEEILILGGDYNVAPYPIDVYDPEVMDGKLCFHKSEREKFRSI-LNLGF 207 Query: 235 IRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + + K ID ++ A L+ + L D Sbjct: 208 TDSFRVLNDYEKKFSWWNYKAGAWQQNRGLRIDNLLLSPQATDKLLSCVIHDKLRGLDT- 266 Query: 286 KSRGKRLSDHCPISIDYD 303 SDH P+ + D Sbjct: 267 ------PSDHAPVVCELD 278 >gi|88854941|ref|ZP_01129607.1| exodeoxyribonuclease III [marine actinobacterium PHSC20C1] gi|88816102|gb|EAR25958.1| exodeoxyribonuclease III [marine actinobacterium PHSC20C1] Length = 278 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 32/301 (10%), Positives = 76/301 (25%), Gaps = 59/301 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + + + D D++ +QE+ Sbjct: 1 MRIATWNVN----------------SVRTRVSRVVDWMLREDIDVLAMQEIKCK------ 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A + Sbjct: 39 ----PEQFPHDAFTDAGYEVELHGLSQWNGVAFASRLPMEDVTVGFDTQPGFGKPLDDGT 94 Query: 144 RAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +E + + + +++ + LD+ Y L+ A +W+ + Sbjct: 95 IPIEARAIGVTVSGARLWSLYVPNGRELDNPHYPYK--LEWLANLAAQTSNWMR--ENPE 150 Query: 203 VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P + GDFN + + + + Sbjct: 151 QPLALMGDFNIAPLDIDVWDVAAFEGKTHISEPERAAFAAFEKAGLIDALRSRGIKGYTY 210 Query: 248 NKNLRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 R + + ID+ + + + S D + +G SDH P+ +D Sbjct: 211 WDYQRLRFPRNEGMRIDFILGSPQFDELVTGASI-------DREERKGDGPSDHVPVVVD 263 Query: 302 Y 302 Sbjct: 264 L 264 >gi|301347815|ref|ZP_07228556.1| nuclease [Acinetobacter baumannii AB056] Length = 555 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 97/325 (29%), Gaps = 50/325 (15%) Query: 21 AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSY 77 A +R+ S+N+ N + G + + + D + K++DAD+ L E+ + Sbjct: 204 ANHIRVASFNVLNYDNGATGFPTERGANTQAEFDKQHHKIVSALKSIDADVYGLMEIANN 263 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + R N+ I AI K V+ L ++ L Sbjct: 264 GYGPNSAIAHLTSALGPDWKYVIPENLDRLGNDVIAVAIIYNSKRVKPLNKAVVLDLGD- 322 Query: 136 SFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCF---LDSLENTYSPSCS-----LLS 185 NR + + K V+ HLKS S + Sbjct: 323 -----KNRTTLAQTFQAVRGNKIFTVIPNHLKSKGCSGVDASSSDADQNDGQGCWNPTRV 377 Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + + W+ + ++ GD N ++ + L + + Sbjct: 378 KAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAPI--LAFEKANYKVLLNDAKVGQGA 435 Query: 244 RCNANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289 + + +D+ + D + Y +++ I +E + Sbjct: 436 QAYSYVFGVASDANGNGGVGNLDHAIADADLYPKVVRTFAWHINADEPMVLDYNEEYKTD 495 Query: 290 -----------KRLSDHCPISIDYD 303 R SDH P+ +D D Sbjct: 496 EQKALFYGEDAYRSSDHDPVIVDLD 520 >gi|260584873|ref|ZP_05852618.1| exodeoxyribonuclease III [Granulicatella elegans ATCC 700633] gi|260157530|gb|EEW92601.1| exodeoxyribonuclease III [Granulicatella elegans ATCC 700633] Length = 253 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 80/304 (26%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 ++L +WN+N R+ + L++Y DI+ LQE V Sbjct: 1 MKLTTWNVNG--------------IRSVLNKGALQEYVLEAQPDILCLQETKAQPEQVDL 46 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + ++++ + + A+ K + Q + D R Sbjct: 47 GMEFAGYHAYWNSAVKKGY----------SGTAIFTKEEPISVQYGLGIEEHDQEGR--- 93 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 ++ +++ ++ + + + + L++ Sbjct: 94 ------VITAEYADYYLVTVYTPNAKRDLTRLSYRQVWEDDFLAFIKKLEE--------T 139 Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P + GD N + + I N + F A Sbjct: 140 KPVIFCGDLNVAHKEIDLANPKTNTKNAGFTKEEREKFDQIVENGLVDAFRFRYPEAVGA 199 Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 IDYFV+ + + + SDHCP+ Sbjct: 200 YTWWSYMGGARARNIGWRIDYFVVSEVLTSRIQEVKIR-----------ADVTGSDHCPV 248 Query: 299 SIDY 302 ++ Sbjct: 249 EMEI 252 >gi|206976682|ref|ZP_03237587.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus H3081.97] gi|217962556|ref|YP_002341128.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH187] gi|206745168|gb|EDZ56570.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus H3081.97] gi|217063640|gb|ACJ77890.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH187] Length = 352 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 108/324 (33%), Gaps = 64/324 (19%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T + + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKEQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117 LQE+ + + F N S + + ++ Sbjct: 110 LQEVDIKSL--RSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTF 167 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLE 174 K + + L G + R + R VE + +N GK + ++++HL + Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA-------- 219 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 Y + QQ ++LK+++ + ++ ++ GD+N+ ++ + +D + P + Sbjct: 220 --YDEGGKIRKQQVEFLKEYMNKHYKNGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWLV 277 Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278 D + ID F++ N ++ ++ Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 335 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P+S + Sbjct: 336 KFEN----------SDHNPVSAVF 349 >gi|315104061|gb|EFT76037.1| exodeoxyribonuclease III [Propionibacterium acnes HL050PA2] Length = 297 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 43/320 (13%), Positives = 77/320 (24%), Gaps = 64/320 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ S+NIN + ++ + D D++ LQE+ A + Sbjct: 1 MRIASFNINGIRAALKRGF---------------SEWMEARDCDVIGLQEVRCRPA--DL 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSR--- 139 S + TA A VR ++ + Sbjct: 44 PEGAFGDRHVSWAPGSLAGRNGLALLTRTAPAEVRSWGTHLVMTPGQAPTPAQVLTGNTN 103 Query: 140 -------AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + V++ + V ++L D + Sbjct: 104 GLPTELLPFADEGRYIEVDLADTPLTVACLYLPKGATPDPANEKAIAKQDRKMAFLAGFR 163 Query: 193 DWI----TQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPND 232 D + + F++ GDFN F + P+ Sbjct: 164 DHLVRRRQECTAQGRHFLVMGDFNIAHENADLKNWKANQHNEGFLPEERQWFDTILSPDT 223 Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + IDY + I D Sbjct: 224 LIDVVRAQHPDTNGPYSWWSWRGKAFVNDAGWRIDYHLASPELASKAITSEI-------D 276 Query: 284 DIKSRGKRLSDHCPISIDYD 303 S +R SDH + IDYD Sbjct: 277 RDPSYSERTSDHAAVVIDYD 296 >gi|291286441|ref|YP_003503257.1| exodeoxyribonuclease III [Denitrovibrio acetiphilus DSM 12809] gi|290883601|gb|ADD67301.1| exodeoxyribonuclease III [Denitrovibrio acetiphilus DSM 12809] Length = 266 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 34/311 (10%), Positives = 75/311 (24%), Gaps = 79/311 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V++N+N + L + + DI+ LQE + Sbjct: 1 MKVVTFNVN----------------SIRTRIHQLEKLIEKHSPDIIGLQETKVRDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +AV K VL Q ++ R Sbjct: 41 ------EFPVEEISRLGYHVEFHGQKTHYGVAVMSKEKPVLVQKGFPSDDSEAQRRL--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + ++ F T+ ++ L ++ Sbjct: 92 ------IMCDFGSVKFIN-----GYFPQGESRTHPVKFPAKAKFYSDLLAYLNTSFSVDD 140 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++ K + + K K Sbjct: 141 NVLLVGDMNVAPTDYDIGISPDSVKRWLKQGKTSFLPEEREWIKNVADWGLTDVYRKIKP 200 Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + ID+ + + + D ++ Sbjct: 201 ESDEFMSWFDYRSKGFERDPKSGLRIDHIMATEALADCCVDCGI-------DYEIRGMEK 253 Query: 292 LSDHCPISIDY 302 SDH P+ D+ Sbjct: 254 PSDHAPVWADF 264 >gi|255033851|ref|YP_003084472.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM 18053] gi|254946607|gb|ACT91307.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM 18053] Length = 365 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 100/333 (30%), Gaps = 70/333 (21%) Query: 2 IRKYVLALVFFLVPCT-----------------ASVAQKVRLVSWNINTLSEQEGVSLWK 44 +K +L L+ C A A++ ++++N++ G Sbjct: 62 RKKAILPLIMVGAACFFLPRTYAFNSTAENVTAAEGAKEFSVMNYNVHVFQRNSGA---- 117 Query: 45 NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS-K 103 + ++ + + AD++ + E + + + V + + HS K Sbjct: 118 -WKSEVKREIRKMKSWIIDSQADVICMPEYFNDDELKGVLDTRNYFSANGYQYNALHSQK 176 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 + + +AV K V + ++ +++ + VL +H Sbjct: 177 KQGKRKGYWGLAVFSKYPIVAVRDTVF---------EEQNGMIQTDIKVGEDTVRVLALH 227 Query: 164 LKS-----------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206 L S + + + + ++ W+ Q S P + Sbjct: 228 LYSMTLQLGALVAQKEMDGIKREGRITFGKMKNGFTRRAAEYEIVQSWVDQ---SPYPLI 284 Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 + GDFN + + + K + N+ I ID+ D + Sbjct: 285 VCGDFNEVP-----YGYVYGKLRKHLRNSFEEKGRGFGFTYNQIPYF-IRIDHQFYDDSR 338 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 +FS++ Y SDH PI Sbjct: 339 LSLHAFRTFSKVPY------------SDHNPIM 359 >gi|254411438|ref|ZP_05025215.1| endonuclease/exonuclease/phosphatase family [Microcoleus chthonoplastes PCC 7420] gi|196181939|gb|EDX76926.1| endonuclease/exonuclease/phosphatase family [Microcoleus chthonoplastes PCC 7420] Length = 261 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 34/285 (11%), Positives = 75/285 (26%), Gaps = 35/285 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R++++NI + + + DI+ QE ++ + Sbjct: 3 IRIITFNIRY-------DKPDPDNQDWRIRRDAIAALIQEYHPDIIGTQEGKAHQLLDLH 55 Query: 84 FPKNTWCIFYSTERLINHSKR-DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + + + + + Sbjct: 56 RRLPNYQSIGGDRTGTGTGEHCAIFYNQDRLKCLDNGDFYLSDTPDIAGSISPEWGNPAP 115 Query: 143 RRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R A + + K I + HL S A+ ++D + Sbjct: 116 RMATWAVFSVAQVSKTITCFNTHLDYT------------SAKARELGARLIRDRMIHCHP 163 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDP---NDSLIRFPKEKDSRCNANKNLRNKIPI 257 + GDFN + L + + +D+L EK + + Sbjct: 164 DNTYLFLTGDFNAEPGSLPREILSDSSTNSMILHDALAGVELEKQQSIHGFTGEAF-AAV 222 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D D + + D+ K +G SDH P+ ++ Sbjct: 223 DTIYYDSRLRQETV---------TVDNRKWQGIFPSDHFPVIANF 258 >gi|332142708|ref|YP_004428446.1| Endonuclease/exonuclease/phosphatase [Alteromonas macleodii str. 'Deep ecotype'] gi|327552730|gb|AEA99448.1| Endonuclease/exonuclease/phosphatase [Alteromonas macleodii str. 'Deep ecotype'] Length = 237 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 88/280 (31%), Gaps = 52/280 (18%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 R+V++NI++ ++ DY + Q+ + AD+V LQEM + + Sbjct: 3 RIVTYNIHSGIGRDK-----------KQDYKRIGQFLASSGADVVLLQEMDTRP-PERDT 50 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 ++ I + S D A+ + + + + + R Sbjct: 51 AQDVRDICAENTFKLIPSPAIREADGWYGNAILTRYDVLSNDTVDVSQSG-----RQPRN 105 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV- 203 + ++ + V++ H Q L + ++Q+ + Sbjct: 106 VQIVELKTEKTPLTVVNTHKGLKKL-------------ERRSQFSLLHEHLSQRLKEKQT 152 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 P V+AGDFN + + ++K + +D + Sbjct: 153 PLVLAGDFNEWQFFSKAFKGLNSLL---------FQQKVGATFPSHFPVFS--LDRVWVT 201 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ++ ++ + SDH P+ ID + Sbjct: 202 DDIKVKACRK----------LKNAKTRVYSDHLPVLIDIE 231 >gi|238014180|gb|ACR38125.1| unknown [Zea mays] Length = 371 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 45/358 (12%), Positives = 89/358 (24%), Gaps = 66/358 (18%) Query: 11 FFLVPCTASVAQK--------VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 F +P + +Q RLVS+NI + ++ + S + Sbjct: 9 FAPLPTEQTESQTDGGAARYQFRLVSYNILAQVYVKSTLFPHSPSACLKWKSRSGAILTE 68 Query: 61 AKNLDADIVFLQEMGSYNAV-AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 K+ DAD + +QE+ Y+ K + + Y +A V+K+ Sbjct: 69 LKSFDADFMCIQELDEYDTFYKKNMENSGYSSIYIQRSGDKRDGCGIFYKPKSAELVQKE 128 Query: 120 NV-------------------------RVLQQSYPLLGAKDSFSRAGNR-----RAVELL 149 + + + P + + R + Sbjct: 129 VILYNDLVEKYVPSDNVNSALENNSSAEEDKNAKPDNSKRGDPNDPRVRLKRDCVGLLAA 188 Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209 +++ +L + + + L + + I+ K +IAG Sbjct: 189 FKLSDPCDQILIVANTHIYWDPQWIDVKLAQAKYLLSRVSQFEQLISNKYNCKPSVIIAG 248 Query: 210 DFNRKINY------------------LGNNDDFWKTIDPNDSLI-----RFPKEKDSRCN 246 DFN N + D + Sbjct: 249 DFNSTPGDKLELSLEENYSELCFLLMEVYNYLLSANLGSTDEAPIKLRSLYAANGGEPEY 308 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQ--ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +DY + + + + SDH PI D+ Sbjct: 309 TNYTPGFTGTLDYIFLSDGSSIKPTSLLRLPRGDSEDVKGGLPNFRHPSDHLPIGADF 366 >gi|154244152|ref|YP_001415110.1| exodeoxyribonuclease III Xth [Xanthobacter autotrophicus Py2] gi|154158237|gb|ABS65453.1| exodeoxyribonuclease III Xth [Xanthobacter autotrophicus Py2] Length = 290 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 34/317 (10%), Positives = 80/317 (25%), Gaps = 63/317 (19%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++P +++A + + +WNIN ++R + L DI+ LQ Sbjct: 9 ILPFQSAIALPLTICTWNIN----------------SVRIRLDIVRAAVETLRPDILCLQ 52 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E + + + + + +A + V + G Sbjct: 53 ETKCQDDKFPLA---------AIRDMGFPHIALNGQKGWHGVATFSRRPFVSVEKGDFCG 103 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS-LLSQQAQWL 191 D+ A L GK + V + ++ + + E + + Sbjct: 104 KGDARHVAVTLAPEHAL----GKPLTVHNFYVPAGGDIPDPELNPKFAHKLAFLDEVTAW 159 Query: 192 KDWITQKKESLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLI 235 + V+ GD N + + + + Sbjct: 160 PPLAAAAADDGRHAVVVGDLNIAPLETDVWGHKQLLNVVSHTPVEVERLNRFQASGPWVD 219 Query: 236 RFPKEKDSRCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + + +D+ Q+ + Sbjct: 220 VMRTFVPPKDKLFTWWSYRSPDYTANDRGRRLDHVWASQSLAPSAQAMTV-------LKD 272 Query: 286 KSRGKRLSDHCPISIDY 302 ++ SDH P+S+ + Sbjct: 273 ARGWEKPSDHVPVSLTF 289 >gi|291238440|ref|XP_002739137.1| PREDICTED: conserved hypothetical protein-like [Saccoglossus kowalevskii] Length = 498 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 46/321 (14%), Positives = 97/321 (30%), Gaps = 53/321 (16%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + A ++++S+N+ L + + + +RT + + D D++ LQE+ Sbjct: 187 SPCQANILKVLSYNVREL---DFMYVHDGQRERTCRIPRRIVEQLG--DVDVIVLQEVFM 241 Query: 77 YNAVAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 V + + RD+ + + + Q Sbjct: 242 GGCFPGVVSLRDLFRHHGFPHMTNKVGDRDTGFLEDGGVYIVSRWPITEQHETIFEATHY 301 Query: 136 SFSRAG-NRRAVEL----LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + A + + V+ + V H+++ S+ QA+ Sbjct: 302 MEADAFAAKGVIYAKIIKTVKGTSRNYHVFGTHMQAQIGDIHD--------SVREDQAKE 353 Query: 191 LKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP-NDSLIRFPKEKDSRCNAN 248 ++ ++ Q P + AGDFN + N+ + + N + + + + Sbjct: 354 MRAFMKDQNIPFSEPVIYAGDFN--CDVRANHRHVRRVLGKLNAGIPPRVGKLTATFDPT 411 Query: 249 KNLRN--------KIPIDYFVMDQNAYK---------FLIQESFSEILYNEDDIKSRGK- 290 N +DY V ++ K L ++ EI N S Sbjct: 412 TNDMFEDKNQAPGPEWLDYVVYSKDHLKPWVSTLEGIKLTSKTQMEICSNGPFKPSYMYP 471 Query: 291 ------------RLSDHCPIS 299 LSDH P+ Sbjct: 472 DSSFCSKKRTITDLSDHYPVL 492 >gi|117619940|ref|YP_856704.1| nuclease [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561347|gb|ABK38295.1| nuclease [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 1072 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 40/367 (10%), Positives = 84/367 (22%), Gaps = 84/367 (22%) Query: 19 SVAQKVRLVSWNINTLSE--------QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + A +R+ S+N+ G + +V T + L+AD+V Sbjct: 472 AEAGDLRVASFNVLNFFTTVVGGDANPTGSNRGALTVAEFELQRTKIVSAITRLNADVVG 531 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN---------NDIHTAIAVRKKNV 121 L E+ + N + + R + I + R V Sbjct: 532 LMEIENNGYGDNSAIANLVAALNAAQPDEADHYRWIASPDGQPIGTDAITVGLIYRPAKV 591 Query: 122 R-----------VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 V Q K G R ++ + + Sbjct: 592 TPEGAASLIALPVQQAEAVDASGKPVTINQGMRESLVQRFSSPKGDAPLTLVVNHLKSKG 651 Query: 171 DSLENTYSPSC------------SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 + Y +L A+ L + + ++ GD N Sbjct: 652 SACFEDYPDYATADPLDGQGHCNALRVSAAKVLGEQLKDLAGD---LLLIGDMNAYGMED 708 Query: 219 GNN---------------DDFWKTI-------------DPNDSLIRFPKEKDSRCNANKN 250 + T+ + + + + Sbjct: 709 PIRVLTDYDPAAQPRHIMSASFTTLAGQPFEESGSALGKGYGYVNLNTRFHGTDTYSYSY 768 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------------LSDHCP 297 +D+ + + + +I I E + G + SDH P Sbjct: 769 EGELGNLDHALANPSLAAKVIGIEDWHINSAESNFFEYGSKYSGQLVKSEGPFSASDHDP 828 Query: 298 ISIDYDF 304 + + + Sbjct: 829 VLVAIQY 835 >gi|310287972|ref|YP_003939231.1| the 5'-nucleotidase domain [Bifidobacterium bifidum S17] gi|309251909|gb|ADO53657.1| conserved hypothetical protein with the 5'-nucleotidase domain [Bifidobacterium bifidum S17] Length = 1597 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 54/373 (14%), Positives = 96/373 (25%), Gaps = 88/373 (23%) Query: 14 VPCTASVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSD------------------- 53 P A+V +RL ++N+ N S + S T D Sbjct: 508 TPDLAAVGGDIRLATFNVLNYFSTTADKTGCSTSNAYTDRDGNPVTAKNCDVRGAWDKAN 567 Query: 54 ----YTLLRQYAKNLDADIVFLQEMGSY------------------------NAVAKVFP 85 + + NL AD+V L+E+ + +A+ + Sbjct: 568 MERQRAKIVKAINNLGADVVSLEEIENSAKAASSVPASFKGERRDYALSTLVDALNEQAG 627 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV-------RVLQQSYPLLGAKDSFS 138 + TW S + + + D I TA + V + Sbjct: 628 EGTWAYVPSPQTVPDLDVEDV---IRTAFIYKPAKVATVGETRILTDSDAFNGKNGYEHG 684 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-----PSCSLLSQQAQWLKD 193 R + +A + + V+ H KS + N + QA L Sbjct: 685 RQPDAQAFKAKGAADSDAFLVVANHFKSKGSASNALNQDPGDGSGNADYTRQAQADALLA 744 Query: 194 WITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK-- 249 + + K L + GDFN + ++ A Sbjct: 745 FTDEVKSDLKLEKVFLVGDFNAYYAEKPIQKIVAAGYTD--LSEQVSEKTGKYTYAYTVK 802 Query: 250 -----NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK-------------- 290 +D+ ++ A + + I E + Sbjct: 803 DESGNTNGGVGSLDHIFANEAAMRSVTGADIWNINSVESVALEYSRYNYNAKNLYQADQF 862 Query: 291 RLSDHCPISIDYD 303 R SDH P+ I Sbjct: 863 RASDHDPVIIGIS 875 >gi|295688833|ref|YP_003592526.1| exodeoxyribonuclease III Xth [Caulobacter segnis ATCC 21756] gi|295430736|gb|ADG09908.1| exodeoxyribonuclease III Xth [Caulobacter segnis ATCC 21756] Length = 262 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 34/302 (11%), Positives = 81/302 (26%), Gaps = 71/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +R+ +WN+N + + + + D+ LQE+ A Sbjct: 1 MRIATWNVN----------------SVNARLERVLGWFEAEAPDVAVLQEIKCVDEKFPA 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F + + + + +A+ K+ + ++D Sbjct: 45 EAFERLGYNVVVH------------GQKTYNGVALLSKHPVEDVRKGLPFLSEDEV-DEQ 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R ++ V+ I+L + + + + Y + + L Sbjct: 92 ARYVEAVI--GAQTPFRVVGIYLPNGNPIGTEKFDYKLA------WMRRLHAHAQNLLAF 143 Query: 202 LVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 VIAGD+N + + ++ + + + D Sbjct: 144 EENLVIAGDYNVIPEAQDVANPEAWLGDALFRPESRAAFRALKNLGLTDAY-MQTDGAPG 202 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ ++ A L + ++ SDH P Sbjct: 203 GYTFWDYQAGAWQRNLGIRIDHLLLSPQAADRLENVVIH-------RDERDKEKPSDHVP 255 Query: 298 IS 299 + Sbjct: 256 VV 257 >gi|253729789|ref|ZP_04863954.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253726524|gb|EES95253.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 274 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 83/278 (29%), Gaps = 28/278 (10%) Query: 43 WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE------ 96 + N + +D Y K + D+V E A K+ Y T Sbjct: 2 YPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQ 59 Query: 97 --RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 S +A+ K + + F N+ V +E NG Sbjct: 60 SGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNG 118 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNR 213 K + V+ H +S DS + ++Q + + D++ + I GD N Sbjct: 119 KNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNV 174 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK 268 D +K ++ ND L N +DY D++ + Sbjct: 175 N-KGTPEFKDMFKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQ 233 Query: 269 --FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300 L+ E +E D + SDH PI Sbjct: 234 PKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 271 >gi|283796572|ref|ZP_06345725.1| exodeoxyribonuclease III [Clostridium sp. M62/1] gi|291075985|gb|EFE13349.1| exodeoxyribonuclease III [Clostridium sp. M62/1] gi|295092540|emb|CBK78647.1| exodeoxyribonuclease III [Clostridium cf. saccharolyticum K10] gi|295115277|emb|CBL36124.1| exodeoxyribonuclease III [butyrate-producing bacterium SM4/1] Length = 251 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 77/302 (25%), Gaps = 78/302 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +++SWN+N L G + LDADI +QE A Sbjct: 3 KMISWNVNGLRACVGKGF---------------LDVFRKLDADIFCIQE-SKLQAGQIDL 46 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + ++S ++ ++ A+ K + + A D R Sbjct: 47 DIPGYYQYWS----------YADKKGYSGTALFSKEEPISVVYGLGIDAHDHEGR----- 91 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ + +VL + + + + L++ P Sbjct: 92 ----VITAEYEDYYVLTCYTPNSQNELARLPYRMEWEDAFLAYLKKLEE--------KKP 139 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + GD N + + + + Sbjct: 140 VIFCGDLNVAHREIDLKNPRTNRKNAGFTDEERGKFSALLDAGFIDTYRHFYPDTEGVYS 199 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF + ++ L+ S + SDHCP+ + Sbjct: 200 WWSYRFKAREKNAGWRIDYFCVSESLEDRLVSASIHTEI-----------MGSDHCPVEL 248 Query: 301 DY 302 Sbjct: 249 VI 250 >gi|299145368|ref|ZP_07038436.1| putative transmembrane endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] gi|298515859|gb|EFI39740.1| putative transmembrane endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] Length = 366 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 84/299 (28%), Gaps = 68/299 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + ++N++ + + + Y +NL ADI+ QE + Sbjct: 110 LTVATYNVDAFNHEHTGYSC-----------KEIASYMRNLQADILCFQEF----GINDE 154 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F ++ S + +AV + + +K+ Sbjct: 155 FGVDSIAAVLSDWPYY-YIPISPEGKNLLQLAVFSRYPIKEENLIVYPDSKNCS------ 207 Query: 144 RAVELLVEINGKKIWVLDIHLKSF-------------CFLDSLENTY---------SPSC 181 + +E N + I + + HL++ DS + Sbjct: 208 --LWCDIETNARTIRLFNNHLQTTEVSQNKRKLEKGLRTDDSQRVERAALGLIDGLHENF 265 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + QA LK I S P +I GDFN + + + F Sbjct: 266 RKRAVQANTLKQLI---AASPYPTIICGDFNSLPSSYVYHTVKGDKLQDG-----FQTSG 317 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 K ++ + IDY + N D S SDH P+ + Sbjct: 318 HGYMYTFKFFKHLLRIDYILHSPE--------------VNSTDYFSPDLTYSDHNPVVM 362 >gi|160879133|ref|YP_001558101.1| exodeoxyribonuclease III [Clostridium phytofermentans ISDg] gi|160427799|gb|ABX41362.1| exodeoxyribonuclease III [Clostridium phytofermentans ISDg] Length = 250 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 80/303 (26%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + + K +DADI +QE A Sbjct: 1 MKLISWNVNGIRACVQKGFC---------------DFFKEVDADIFCIQE-SKLQAGQIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + G R Sbjct: 45 LDFEGYYQYWNYAEKKGY----------SGTAIFTKKEPLQVT----YGMGIEEHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + + + + L++ Sbjct: 91 -----VITLEFEDFYMVTVYTPNSQNELARLSYRMEWEDEFRRFLKKLEE--------TK 137 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + + + F + Sbjct: 138 PVVVCGDLNVAHKEIDLKNPNTNQMNAGFTIEERTKFSELLEAGFIDTFRYFYPDAMDMY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ Q L+ + SDHCPI Sbjct: 198 SWWSYRFKAREKNTGWRIDYFLASQGLESKLVSAKIHSQIL-----------GSDHCPIE 246 Query: 300 IDY 302 ++ Sbjct: 247 LEI 249 >gi|153853826|ref|ZP_01995182.1| hypothetical protein DORLON_01173 [Dorea longicatena DSM 13814] gi|149753576|gb|EDM63507.1| hypothetical protein DORLON_01173 [Dorea longicatena DSM 13814] Length = 250 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 31/304 (10%), Positives = 74/304 (24%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N + DADI +QE A Sbjct: 1 MKFISWNVNGIRACAQKGFM---------------DIFNEADADIFCIQE-SKMQAGQLE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + G R Sbjct: 45 LDTPGYHQYWN----------YAERKGYSGTAIFTKEEPLSVS----YGLGIEEHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + + + ++ + + + + L++ Sbjct: 91 -----VITLEFEDFYFITVYTPNSQSELARLDYRMRWEDAFLAYLKKLEE--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + F Sbjct: 138 PVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKFTNLLNAGFIDTFRYFYPDAEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + ++ + + SDHCP+ Sbjct: 198 SWWSYRFSARKKNAGWRIDYFCVSESLKDRIKDAKILTEI-----------MGSDHCPVE 246 Query: 300 IDYD 303 +D++ Sbjct: 247 LDFE 250 >gi|270293837|ref|ZP_06200039.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270275304|gb|EFA21164.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 335 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 39/341 (11%), Positives = 89/341 (26%), Gaps = 57/341 (16%) Query: 1 MIRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKN-----------S 46 M + VL + V + + + +N+ L + + + + Sbjct: 1 MRKLLVLCSFWLCVATLGAQNAERKLYSVAFYNLENLFDTIHDAGKNDYEFLPDGSYQWT 60 Query: 47 VKRTTSDYTLLRQYAKNLDADI-------VFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99 K+ S L + +L D+ + + E + + + + + Sbjct: 61 AKKYESKLQNLSKVLGSLSRDLVPEGPAFIGVAEAENSRVLEDLVKQPAISNYEFVHYEG 120 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 I A+ K V L + + R + + ++ G+++ V Sbjct: 121 P-----DRRGIDCALLYDPKQFSVTHSKLVLSTPFEGDTVHLTRGFLIVDGQLAGERVCV 175 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 + H S SP ++Q + LKD + + + + ++ GD N Sbjct: 176 IVNHWPSR-------GAKSPVRVHAARQVKALKDSLMR-SDKKLKLIVMGDMNDDPMDES 227 Query: 220 N-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 + + +D D V+ + K Sbjct: 228 MEVLGARKYPKQVKKGEFYNPWWETLEDKGVGTLLYRGKWNLFDQIVISKPLLKAKKGLR 287 Query: 275 FSEI------------------LYNEDDIKSRGKRLSDHCP 297 + ++ SDH P Sbjct: 288 YDHNEVFIRDYLIQQDGKYKGSPLRTHGGRTWLNGYSDHLP 328 >gi|296122827|ref|YP_003630605.1| endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM 3776] gi|296015167|gb|ADG68406.1| Endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM 3776] Length = 321 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 43/327 (13%), Positives = 92/327 (28%), Gaps = 50/327 (15%) Query: 5 YVLALVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 ++ + L+ T + A+ VR++S+N+ + + + Sbjct: 15 FIAGFSWLLLSSTVTQAESPVVRVMSYNLWHGGDAGKQP------------LEQTAKVIR 62 Query: 63 NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 AD+V LQE Y + P I + D A+ + Sbjct: 63 EARADLVGLQETRGYATGGQPRPDRAKEIA--------QILGWNYFDQGGGTAILSRYPI 114 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 + S L+ I + +L+I + F+ + + + Sbjct: 115 GKASPGKWGVEIEHPSGTKLYLFNAHLMYIPYQPYQLLNIPYGDYPFIKTEQEAIDFAKK 174 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD------------------- 223 +Q + L I + + GDFN ++ Sbjct: 175 ARGEQVERLIADIKATVPADATVFVTGDFNEPSHWDWTAAAQKAGRCPIAVKWPSTSMMA 234 Query: 224 ----FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEI 278 + + + P + + +++ ID+ +M Q K L + E Sbjct: 235 ETGFIDTYREAHPDPVTAPGITWTPLTKITDPKDRHDRIDFVLMRQGGGKVLSSQVLGES 294 Query: 279 LYNEDDIKSRGKRLSDHCPIS--IDYD 303 D + SDH + ++ Sbjct: 295 KEAADVVVIP--YPSDHRSVVSAVELT 319 >gi|255655350|ref|ZP_05400759.1| putative exodeoxyribonuclease [Clostridium difficile QCD-23m63] gi|296451338|ref|ZP_06893076.1| exodeoxyribonuclease III [Clostridium difficile NAP08] gi|296259754|gb|EFH06611.1| exodeoxyribonuclease III [Clostridium difficile NAP08] Length = 250 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 81/305 (26%), Gaps = 82/305 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R +SWN+N + G + K +DAD+ LQE Sbjct: 1 MRFISWNVNGIRACAGKGF---------------LDFFKEVDADVFCLQETKLQEG-QIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S + + Sbjct: 45 LDLPGYFQYWNYAERKGYSGTAIFTK-----------------------------KEPLK 75 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT--QKKES 201 + +E + K+ V+ + + F F+ L + +W D+I K ++ Sbjct: 76 VMYGINIEEHDKEGRVITLEFEDFYFVTVYTPNSQSELKRLEYRTRWEDDFIDYLTKLDN 135 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P ++ GD N + + + + + + + Sbjct: 136 HKPVIVCGDMNVAHKEIDLKNPKNNMKNAGFTKEEREKFSKLLDSGFIDTYRYFNPDKEG 195 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDYF + LI + SDHCP Sbjct: 196 VYSWWSYRFNARKNNAGWRIDYFCASKKLEDRLISADIHTEVL-----------GSDHCP 244 Query: 298 ISIDY 302 + ++ Sbjct: 245 VELEI 249 >gi|148268477|ref|YP_001247420.1| phospholipase C [Staphylococcus aureus subsp. aureus JH9] gi|150394540|ref|YP_001317215.1| phospholipase C [Staphylococcus aureus subsp. aureus JH1] gi|257793277|ref|ZP_05642256.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A9781] gi|258413680|ref|ZP_05681954.1| beta-hemolysin [Staphylococcus aureus A9763] gi|258419786|ref|ZP_05682749.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A9719] gi|258447831|ref|ZP_05695966.1| beta-hemplysin [Staphylococcus aureus A6224] gi|258454465|ref|ZP_05702432.1| beta-hemplysin [Staphylococcus aureus A5937] gi|282928805|ref|ZP_06336398.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A10102] gi|295407331|ref|ZP_06817129.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A8819] gi|297246410|ref|ZP_06930252.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A8796] gi|147741546|gb|ABQ49844.1| Phospholipase C [Staphylococcus aureus subsp. aureus JH9] gi|149946992|gb|ABR52928.1| Phospholipase C [Staphylococcus aureus subsp. aureus JH1] gi|257787249|gb|EEV25589.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A9781] gi|257839633|gb|EEV64103.1| beta-hemolysin [Staphylococcus aureus A9763] gi|257844197|gb|EEV68583.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A9719] gi|257858928|gb|EEV81796.1| beta-hemplysin [Staphylococcus aureus A6224] gi|257863322|gb|EEV86083.1| beta-hemplysin [Staphylococcus aureus A5937] gi|282589540|gb|EFB94628.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A10102] gi|294967776|gb|EFG43807.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A8819] gi|297176681|gb|EFH35942.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A8796] gi|312830376|emb|CBX35218.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315128689|gb|EFT84691.1| phospholipase C [Staphylococcus aureus subsp. aureus CGS03] Length = 274 Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 82/278 (29%), Gaps = 28/278 (10%) Query: 43 WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE------ 96 + N + +D Y K + D+V E A K+ Y T Sbjct: 2 YPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQ 59 Query: 97 --RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 S +A+ K + + F N+ V +E NG Sbjct: 60 SGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNG 118 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNR 213 K I V+ H +S DS + ++Q + + D++ + I GD N Sbjct: 119 KNIHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNV 174 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK 268 D K ++ ND L N +DY D++ + Sbjct: 175 N-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQ 233 Query: 269 --FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300 L+ E +E D + SDH PI Sbjct: 234 PKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 271 >gi|326539108|gb|ADZ87323.1| endonuclease/exonuclease/phosphatase [Brucella melitensis M5-90] Length = 357 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 84/303 (27%), Gaps = 60/303 (19%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 ADI+ LQE+ + A+ + + R + + I A+ +R Sbjct: 53 IAETRADILCLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMRDTT 112 Query: 118 ---KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKIWVL 160 + S+ L D R R + + + I G+ + + Sbjct: 113 RDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPLSLF 172 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNRKIN 216 HLKS + ++ + S + +A+ ++ I +K + ++I GDFN Sbjct: 173 VAHLKSMSGARNGQDGRASSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFNDYRE 232 Query: 217 Y----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP--- 256 + + ++ + Sbjct: 233 RILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLERHLC 292 Query: 257 -IDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +DY + + + + + SDHCP+S+ Sbjct: 293 QLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHCPVSV 352 Query: 301 DYD 303 + Sbjct: 353 TLN 355 >gi|313499211|gb|ADR60577.1| Exodeoxyribonuclease III [Pseudomonas putida BIRD-1] Length = 265 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 76/304 (25%), Gaps = 70/304 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + +++ ++NIN S L + + DI LQE Sbjct: 2 KALKIATFNING----------------IRSRLPALLAWLEREQPDIACLQE-------- 37 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +A+ + L+ L G ++ Sbjct: 38 --LKAADQQFPRAELEAAGYGSLHHGQPSWNGVAILVRGSDPLEVRRGLPGLEEDSQSRY 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 A ++ V ++L + + Y + L ES Sbjct: 96 LEAAAHGVL--------VACLYLPNGNPQPGPKFDYK------LHWFECLIQHARSLYES 141 Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246 P ++AGDFN + ++ + L Sbjct: 142 GHPTLLAGDFNVVPTDMDIYNPRSWLKDALLQPESRACYQRLLDQGWLDAIRHLYPDERV 201 Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ +++ +L + D + SDH P+ Sbjct: 202 YTFWDYFRNHWARNAGLRIDHLLLNHELAPYLKRAGV-------DAWVRNEAKASDHAPV 254 Query: 299 SIDY 302 I+ Sbjct: 255 WIEL 258 >gi|291528729|emb|CBK94315.1| exodeoxyribonuclease III [Eubacterium rectale M104/1] Length = 251 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 79/305 (25%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + ++DAD +QE A Sbjct: 1 MKFISWNVNGLRACVQKGF---------------LDFFNSIDADFFCIQE-SKLQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ KN + + D R Sbjct: 45 LDLPGYHQYWNYAEKKGY----------SGTAIFAKNEPLSVSYGIGIEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ + + Q ++++ ++ Sbjct: 91 -----VITLEYDNFYLVTCYTPN-------SQNELKRLPYRMQWEDDFREYLKT-LDAKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N N + + F Sbjct: 138 PVVLCGDLNVAHNEIDLKNPKTNRKNAGFSDEERAKMTELLGSGFTDTFRYFYPDAEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ + L + + + SDHCP+ Sbjct: 198 SWWSYRFKAREKNAGWRIDYFITSKRINDKLQKAAIHTDVL-----------GSDHCPVE 246 Query: 300 IDYDF 304 +D +F Sbjct: 247 VDIEF 251 >gi|291519655|emb|CBK74876.1| exodeoxyribonuclease III [Butyrivibrio fibrisolvens 16/4] Length = 250 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 78/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VSWN+N L G + +DADI+ LQE+ Sbjct: 1 MKFVSWNVNGLRAVMGKGFM---------------DFFDGIDADIIGLQEIKLSEG-QLE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + K + +++ + + AV K + + D R Sbjct: 45 WDKPGYHAYWNYAEKKGY----------SGTAVFTKKEPISVSYGIGIEEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + + + + + + Q L + Sbjct: 91 -----VITLEFEDFYFITCYTPNSQNELKRLDYRMTWEDDFRAYLQKLNE--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N + + F + + Sbjct: 138 GVILCGDLNVAHEEIDIKNPKTNRHNAGFTDEERAKMTELLSAGFVDSFRYFYPDQTDIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ ++ + SDHCPI Sbjct: 198 SWWSYRFKAREKNAGWRIDYFIVSEDIKDRMKDSKIHT-----------DVMGSDHCPIE 246 Query: 300 IDYD 303 +D++ Sbjct: 247 LDFE 250 >gi|315606307|ref|ZP_07881323.1| exodeoxyribonuclease III [Prevotella buccae ATCC 33574] gi|315251998|gb|EFU31971.1| exodeoxyribonuclease III [Prevotella buccae ATCC 33574] Length = 249 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 81/302 (26%), Gaps = 77/302 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R +SWN+N L ++ K LDAD LQE Sbjct: 1 MRFISWNVNGLRACVSKGFEES---------------FKALDADFFCLQETKMQEG-QLN 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K+ + + D R Sbjct: 45 LQFEGYDSYWNYAEKKGY----------SGTAIYTKHKPLNVTYGLGIEEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + +I Q ++ Sbjct: 91 -----VITLEMEDFYLITVYTPN-------SQDELRRLNYRMTWEDDFLKYI-QGLDAKK 137 Query: 204 PFVIAGDFNRKINYLGNNDDFWK--------------TIDPNDSLIRFPKEKDSRCNANK 249 P ++ GD N + + TI N + K Sbjct: 138 PVIVCGDLNVAHEEIDLKNPKTNRRNAGFTDEEREKMTITLNSGFTDSFRYKYPEQVTYS 197 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF++ L+ +Y SDHCP+ + Sbjct: 198 WWSYRFHAREKNAGWRIDYFLISNRLRDRLVDAKIHTEVY-----------GSDHCPVEL 246 Query: 301 DY 302 D Sbjct: 247 DL 248 >gi|111017313|ref|YP_700285.1| exodeoxyribonuclease III [Rhodococcus jostii RHA1] gi|110816843|gb|ABG92127.1| probable exodeoxyribonuclease III [Rhodococcus jostii RHA1] Length = 304 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 39/326 (11%), Positives = 79/326 (24%), Gaps = 67/326 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++N+N + + R D+V LQE+ + Sbjct: 1 MRIATFNVNGIRAAQRRGFEDWLGDR---------------GPDVVALQEVRARAEAIPP 45 Query: 84 FPKNTWCIFYSTERLINHSKRDS-------NNDIHTAIAV-RKKNVRVLQQSYPLLGAKD 135 + + Y + + + A+ R + Sbjct: 46 GVFGHYHLTYDEGDVAGRNGVAVLTRGAPVAVRTWSGTALMRAPGEMHTDRVELDPEPLA 105 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL------------DSLENTYSPSCSL 183 + + V++ I V ++L Y Sbjct: 106 RGLGEFANQGRYVEVDLAEAPITVASMYLPKGGLPAHLQKPGRMREAPDGGARYDRKMRF 165 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG----------------NNDDFWKT 227 LS A+ L + ++ GD N + F Sbjct: 166 LSAFARQLTRSRRTARARGRELLLMGDLNIAHTRSDVRNWRRSNQAEGFLPEEREWFDSI 225 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEI 278 + P + ++ IDY + + + + Sbjct: 226 LSPRTLVDVVRRQHPGVDGPYSWWSWLGQSFVNDIGWRIDYHLATPDLARAAVTAG---- 281 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 D +R+SDH P+ +DYDF Sbjct: 282 ---TDRDPVADRRMSDHAPVVVDYDF 304 >gi|312076146|ref|XP_003140730.1| hypothetical protein LOAG_05145 [Loa loa] gi|307764104|gb|EFO23338.1| hypothetical protein LOAG_05145 [Loa loa] Length = 415 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 79/296 (26%), Gaps = 36/296 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+VS N L W + + + + DIV L+E+ + ++ Sbjct: 5 LRVVSLNCWALPLP-----WPFRSNDHSLRIKKIGEALLLNEYDIVALEEVWGEHDFLRL 59 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN- 142 ++ + R V L + L G R Sbjct: 60 ------QEALKKIFGYSYYFHSGFTGSGICVFSRYPIVSTLMHRFTLNGFAHHIHRGDWF 113 Query: 143 --RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + + +EI ++ HL + QA L ++ Sbjct: 114 AGKGVGLVEIEIEQYRVNFYAAHLHA-----EYNPNKDLYLPHRLAQAFELAQFVKHTSY 168 Query: 201 SLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPNDSLIRFPKEKDSRCNANKNL- 251 S ++AGDFN + + L D W + + C + Sbjct: 169 SADALILAGDFNIEPDNLAYQLIVQNANLRDAWIQKPNSCDDCGATFGRLDNCYTPQRFK 228 Query: 252 ---RNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +DY + + L ++ + SDH + ++ Sbjct: 229 NKKNYGKRLDYIMYRSGRSKIELKLCEIRMNRIHDQKSINY----SDHVGVYAEFS 280 >gi|302876908|ref|YP_003845541.1| exodeoxyribonuclease III Xth [Clostridium cellulovorans 743B] gi|307687596|ref|ZP_07630042.1| exodeoxyribonuclease III Xth [Clostridium cellulovorans 743B] gi|302579765|gb|ADL53777.1| exodeoxyribonuclease III Xth [Clostridium cellulovorans 743B] Length = 253 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 75/303 (24%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + + K++DADI LQE Sbjct: 1 MKLISWNVNGIRACVEKGF---------------LDFFKSVDADIFCLQETKLQQG-QID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S A G R Sbjct: 45 LDLEGYEQYWNYAEKKGYSGTAVFTKEKPLSAS--------------YGLNIEEHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + + + L+ Sbjct: 91 -----VITLEYDDFYLVTVYTPNSKEELARLEYRMEWEDAFRAYLKKLEK--------NK 137 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + + + + A Sbjct: 138 PVIVCGDLNVAHKEIDLKNPKTNRKNPGFSDEERAKFSELLASGFIDTYRYFYPDKEGAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + L+ + SDHCP+ Sbjct: 198 SWWSYRFNARTKNAGWRIDYFVISEELKDKLVSAEIHNEIL-----------GSDHCPVE 246 Query: 300 IDY 302 + Sbjct: 247 LVI 249 >gi|66046507|ref|YP_236348.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae B728a] gi|63257214|gb|AAY38310.1| Endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae B728a] Length = 261 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 40/295 (13%), Positives = 86/295 (29%), Gaps = 51/295 (17%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 S + + +++ N++ LR+ + + ADIVFLQE+ Sbjct: 11 ATPVSASVSLNVLTMNMHMGFGIFNRRF----------ILPELREAVRTVSADIVFLQEV 60 Query: 75 --GSYNAVAKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + +V T + S + + D A+ K + ++ Sbjct: 61 HGEQQSHARRVKDWPTISQYEFLADSMWNDFAYGRNAVYPDGDHGNALLSKYPIIQHENL 120 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + S R + ++++ V I + S QQ Sbjct: 121 DI-----SIHGTEQRGLLHCILDVPHAG-RVHAICVHLGLR-----------ESHRRQQL 163 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + L + + + P ++AGDFN ++ + F + + + Sbjct: 164 KLLNELMAR-IPEGEPVIVAGDFNDWRQRAD------ASLQGSGLHEVFVERFGAPAKSF 216 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +D + S LSDH P++++ Sbjct: 217 PARWPLLCLDRIYVRNATSHRPKVLS-----------SRPWSHLSDHAPLAVELT 260 >gi|67462992|ref|XP_648153.1| phospholipase C precursor [Entamoeba histolytica HM-1:IMSS] gi|67464775|ref|XP_648579.1| phospholipase C precursor [Entamoeba histolytica HM-1:IMSS] gi|67478856|ref|XP_654810.1| phospholipase C precursor [Entamoeba histolytica HM-1:IMSS] gi|56464156|gb|EAL42767.1| phospholipase C precursor, putative [Entamoeba histolytica HM-1:IMSS] gi|56464786|gb|EAL43197.1| phospholipase C precursor, putative [Entamoeba histolytica HM-1:IMSS] gi|56471891|gb|EAL49424.1| phospholipase C precursor, putative [Entamoeba histolytica HM-1:IMSS] Length = 304 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 91/305 (29%), Gaps = 33/305 (10%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAV 80 Q ++++++NI +R + + DIV QE+ +++ Sbjct: 8 QTIKILTYNIYCRPPGITARGNDYKKERLMTFCD---EELNKY--DIVAFQELFGAFSSK 62 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++F + + E + K + + + V Q S + Sbjct: 63 RRIFIEKAKQQGFVYEAHLERPKWPIYPVDG-GVCILSRFPIVSQHQKIYTRGCYSDGAS 121 Query: 141 GNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK- 198 + + ++I GK+I + HL++ + + S + Q +I + Sbjct: 122 A-KGVIHTKIDIGFGKEIHLFSTHLQADYY--ESREDNAKSRRHRNTQINECLHFINECT 178 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN----- 253 P + GD N K DDF T+ N+ I + + Sbjct: 179 AHDNDPIIFEGDLNIKGG-TKEYDDFLTTLHSNEFDIEAHDFLFEDKKVHPITHSEVIDG 237 Query: 254 ---------------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +DY +N + ++ + +SDH + Sbjct: 238 EQVDTVITSKVPAPINARLDYIWGIKNGRERKELKAIQTNVCKFQTTNKPFPYMSDHYGV 297 Query: 299 SIDYD 303 + + Sbjct: 298 EVTLE 302 >gi|322434444|ref|YP_004216656.1| exodeoxyribonuclease III Xth [Acidobacterium sp. MP5ACTX9] gi|321162171|gb|ADW67876.1| exodeoxyribonuclease III Xth [Acidobacterium sp. MP5ACTX9] Length = 247 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 37/276 (13%), Positives = 82/276 (29%), Gaps = 58/276 (21%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 + ++++ D++ LQE+ A+ F + + T+ Sbjct: 5 RARAEHVKRWLAARQPDVLLLQELKGTEFPAEWFMEQGYHSAAVTQ------------KA 52 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 + +A+ + + + +DS +R +E +++ + V++I+L + + Sbjct: 53 YNGVAIVSRTPLEVVSTTLAGDPEDSHARF-----LEAMID----GMRVVNIYLPNGNPV 103 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------- 217 + + Y + L + + VP VI GDFN Sbjct: 104 GTPKFEYKLA------WMDRLMEQMKVWLGDGVPTVIGGDFNVIPEEIDCHKPASWVHDA 157 Query: 218 --LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNA 266 + ++ + F I ID+F++ Sbjct: 158 LFQPESRARYRGMLELGYTDAFRTLHPGLGGQFTFWDYFRQAFESNRGIRIDHFLLTAEM 217 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 L D + SDH PI + + Sbjct: 218 AGRLESCEI-------DRGPRGEAKPSDHTPIVVRF 246 >gi|206970057|ref|ZP_03231010.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH1134] gi|218234375|ref|YP_002369878.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus B4264] gi|228955337|ref|ZP_04117345.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229153262|ref|ZP_04281440.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550] gi|229181366|ref|ZP_04308695.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W] gi|206734634|gb|EDZ51803.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH1134] gi|218162332|gb|ACK62324.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus B4264] gi|228602102|gb|EEK59594.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W] gi|228629866|gb|EEK86517.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550] gi|228804470|gb|EEM51081.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 352 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 108/324 (33%), Gaps = 64/324 (19%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T ++ + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117 LQE+ + + F N S + + ++ Sbjct: 110 LQEVDIKSL--RSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTF 167 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLE 174 K + + L G + R + R VE + +N GK + ++++HL + Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA-------- 219 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 Y + QQ ++LK+++ + E+ ++ GD+N+ ++ +D + P + Sbjct: 220 --YDEGGKIRKQQVEYLKEYMNKHYENGDYVIMGGDWNQLVSNAQLSDPKFVKERPEWLV 277 Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278 D + ID F++ N ++ ++ Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 335 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P+S + Sbjct: 336 KFEN----------SDHNPVSAVF 349 >gi|21283669|ref|NP_646757.1| truncated beta-hemplysin [Staphylococcus aureus subsp. aureus MW2] gi|87160283|ref|YP_494624.1| truncated beta-hemolysin [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195913|ref|YP_500724.1| truncated beta-hemolysin [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151222138|ref|YP_001332960.1| truncated beta-hemolysin [Staphylococcus aureus subsp. aureus str. Newman] gi|221140348|ref|ZP_03564841.1| phospholipase C [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253315026|ref|ZP_04838239.1| phospholipase C [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|258422838|ref|ZP_05685739.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A9635] gi|258434311|ref|ZP_05688712.1| beta-hemplysin [Staphylococcus aureus A9299] gi|258444471|ref|ZP_05692804.1| beta-hemplysin [Staphylococcus aureus A8115] gi|258452367|ref|ZP_05700377.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A5948] gi|269203658|ref|YP_003282927.1| truncated beta hemolysin [Staphylococcus aureus subsp. aureus ED98] gi|282925003|ref|ZP_06332668.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A9765] gi|294849557|ref|ZP_06790299.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A9754] gi|296277053|ref|ZP_06859560.1| phospholipase C [Staphylococcus aureus subsp. aureus MR1] gi|300912910|ref|ZP_07130348.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus TCH70] gi|304379191|ref|ZP_07361934.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|21205110|dbj|BAB95805.1| truncated beta-hemplysin [Staphylococcus aureus subsp. aureus MW2] gi|87126257|gb|ABD20771.1| truncated beta-hemolysin [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203471|gb|ABD31281.1| truncated beta-hemolysin [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374938|dbj|BAF68198.1| truncated beta-hemolysin [Staphylococcus aureus subsp. aureus str. Newman] gi|257847000|gb|EEV71013.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A9635] gi|257849259|gb|EEV73240.1| beta-hemplysin [Staphylococcus aureus A9299] gi|257850362|gb|EEV74311.1| beta-hemplysin [Staphylococcus aureus A8115] gi|257859954|gb|EEV82792.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A5948] gi|262075948|gb|ACY11921.1| truncated beta hemolysin [Staphylococcus aureus subsp. aureus ED98] gi|282592697|gb|EFB97704.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A9765] gi|294823694|gb|EFG40121.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A9754] gi|300885688|gb|EFK80895.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus TCH70] gi|302333671|gb|ADL23864.1| phospholipase C [Staphylococcus aureus subsp. aureus JKD6159] gi|302751900|gb|ADL66077.1| phospholipase C [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304342237|gb|EFM08133.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315196779|gb|EFU27124.1| phospholipase C [Staphylococcus aureus subsp. aureus CGS01] gi|320139613|gb|EFW31482.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus MRSA131] gi|320143656|gb|EFW35434.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus MRSA177] gi|329314681|gb|AEB89094.1| Sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus T0131] gi|329724930|gb|EGG61432.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus 21189] Length = 274 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 82/278 (29%), Gaps = 28/278 (10%) Query: 43 WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE------ 96 + N + +D Y K + D+V E A K+ Y T Sbjct: 2 YPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQ 59 Query: 97 --RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 S +A+ K + + F N+ V +E NG Sbjct: 60 SGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNG 118 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNR 213 K + V+ H +S DS + ++Q + + D++ + I GD N Sbjct: 119 KNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNV 174 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK 268 D K ++ ND L N +DY D++ + Sbjct: 175 N-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQ 233 Query: 269 --FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300 L+ E +E D + SDH PI Sbjct: 234 PKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 271 >gi|325191472|emb|CCA26245.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 521 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 87/305 (28%), Gaps = 22/305 (7%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 C + ++ +R++++N+ + + V + K L K +A I+ QE+ Sbjct: 223 SCATNQSK-LRVLTYNVWNTNPSDQVG---SRWKDYNKRMDGLVDAVKQSEASIIGFQEI 278 Query: 75 G---------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 + + + + + + + D + +A+ + Sbjct: 279 RFDATLGQAGDHAQIQHLVSRLPNFQYVYQAAMHYIDRSDPFKRVEEGLAIFSRYPIHSS 338 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSL-ENTYSPSCSL 183 L + + R + +V++ K+ V HL Sbjct: 339 DYILLHKDPNDPNDQHQRICLHAVVDVPDWGKVDVYVTHLSLSKASRERSVIQIWKFMQA 398 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND-DFWKTIDPNDSLIRFPKEKD 242 Q+L + + +S + G + D K ++P + Sbjct: 399 GYGVTQFLLGDLNAEPQSEEIQFLQGTAALFGDKTDLRDSWLDKHVEPVPRSK--ERVDR 456 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKF----LIQESFSEILYNEDDIKSRGKRLSDHCPI 298 S + ID + E L N D + + SDH + Sbjct: 457 SERFTFSSENPCKRIDLIFYRGQGVTKEIRLVGNNPLMEPLSNADKLNTNAMYPSDHRGV 516 Query: 299 SIDYD 303 +++ Sbjct: 517 IAEFE 521 >gi|256425941|ref|YP_003126594.1| hypothetical protein Cpin_6992 [Chitinophaga pinensis DSM 2588] gi|256040849|gb|ACU64393.1| hypothetical protein Cpin_6992 [Chitinophaga pinensis DSM 2588] Length = 1087 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 42/316 (13%), Positives = 88/316 (27%), Gaps = 39/316 (12%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + + +++V+WNI + + + K +DADI L E+ Sbjct: 608 SGTSLRSLKVVNWNIEWFGSPVQNPANDSLQQ------ANVTTILKKMDADIFALAEVVD 661 Query: 77 YNAVAKV---FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 V P ++ I + D + A + ++ L+ L Sbjct: 662 TARFRAVANQMPGYSYIISDFGSYADSIKDVDYVSAQKLAFLYKTSVIKGLRSYGVLRKG 721 Query: 134 KDS---FSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 S ++ + R L + ++ L + S + A Sbjct: 722 GSSNAYYNWSSGRFPFLLEAQAKLNNDSALIRFVLLHAKANTGTASDKIESWNRRRNGAL 781 Query: 190 WLKDWITQKKESLVPFVIAGDFNRK----------INYLGNNDDFWKTIDPNDSLIRFPK 239 LKD + + + ++ GDFN + + DF + Sbjct: 782 ELKDSLDVQYPTANLVIL-GDFNDAFDKTITTELAPDTTTSYIDFLNDSIHYKPVTLLLS 840 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID ++ + S E + S +DH P+ Sbjct: 841 LQGQQ----STASFNTVIDNVLISDEMALSYLPGSARVRKEVETLVNSYSSTTTDHYPVQ 896 Query: 300 -----------IDYDF 304 + +F Sbjct: 897 TNYNLHILAHPAELEF 912 >gi|255009509|ref|ZP_05281635.1| exodeoxyribonuclease [Bacteroides fragilis 3_1_12] gi|313147282|ref|ZP_07809475.1| exodeoxyribonuclease [Bacteroides fragilis 3_1_12] gi|313136049|gb|EFR53409.1| exodeoxyribonuclease [Bacteroides fragilis 3_1_12] Length = 253 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 32/303 (10%), Positives = 88/303 (29%), Gaps = 77/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++++N+N L L ++ + D++ LQE + A Sbjct: 1 MKIITYNVNGLRAAVNKGLP---------------EWLAEENPDVLCLQETKLQPDQYPA 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F + + + + + + +A+ K + G Sbjct: 46 EAFEALGYKAYLYSAQKKGY----------SGVAILTKIEP----DHIEYGMGIEEYDNE 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + + V+ ++ S D + + + + ++T+ ++S Sbjct: 92 GRF-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEAFQKYVTELRKS 139 Query: 202 LVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ GD+N + + + + + Sbjct: 140 RPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLSAGFIDSFRTLYPEKQE 199 Query: 246 NANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + R IDY ++ + L + + SDHCP+ Sbjct: 200 YTWWSYRFNSRAKNKGWRIDYCMVSEPVRSLLKEAVILNNAVH-----------SDHCPM 248 Query: 299 SID 301 +++ Sbjct: 249 ALE 251 >gi|332187206|ref|ZP_08388946.1| exodeoxyribonuclease III [Sphingomonas sp. S17] gi|332012906|gb|EGI54971.1| exodeoxyribonuclease III [Sphingomonas sp. S17] Length = 257 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 84/302 (27%), Gaps = 70/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N + L +Y DADIV LQE Sbjct: 1 MKITTYNVNG----------------IKARLPRLLEYLAEADADIVCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +AV + + P+ + + Sbjct: 35 LKASDETFPVADIEAAGYGAVWHGQKSWNGVAVLAR------GAQPVERQRGLAGEDEDE 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + L E+NG + V ++L + + Y + + L + V Sbjct: 89 HSRYLECEVNG--LVVASLYLPNGNPQPGPKFDYK------LRWMERLAARARELLAEEV 140 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P V+AGD+N N + + + + + + Sbjct: 141 PAVLAGDYNVIPNDDDTFSVPAMASDALMQPESRQAYRRLLTQGWTDSVRTRAPKGGVWT 200 Query: 248 NKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + ID+ ++ A L+ D ++ SDH P + Sbjct: 201 FWDYQAGSWQRDAGFRIDHLLLSPQAADRLVDAGV-------DKSYRGREKASDHAPTWV 253 Query: 301 DY 302 Sbjct: 254 RL 255 >gi|330898293|gb|EGH29712.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 248 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 41/291 (14%), Positives = 86/291 (29%), Gaps = 51/291 (17%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GS 76 S + + +++ N++ LR+ + + ADIVFLQE+ Sbjct: 2 SASVSLNVLTMNMHMGFGIFNRRF----------ILPELREAVRTVSADIVFLQEVHGEQ 51 Query: 77 YNAVAKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + KV T + S + + D A+ K + ++ + Sbjct: 52 QSHARKVKDWPTISQYEFLADSMWSDFAYGRNAVYPDGDHGNALLSKYPIIQHENLDI-- 109 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 S R + ++E+ V + + S QQ + L Sbjct: 110 ---SIHGTEQRGLLHCILEVPHAG-RVHAVCVHLGLR-----------ESHRRQQLKLLN 154 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + + + P ++AGDFN ++ + F + + + Sbjct: 155 ELMAR-IPEGEPVIVAGDFNDW------RRRADASLQGSGLHEVFVERFGAPAKSFPARW 207 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +D + S LSDH P++++ Sbjct: 208 PLLCLDRIYVRNATSHRPKVLS-----------SRPWSHLSDHAPLAVELT 247 >gi|183230395|ref|XP_001913433.1| phospholipase C precursor [Entamoeba histolytica HM-1:IMSS] gi|169802914|gb|EDS89784.1| phospholipase C precursor, putative [Entamoeba histolytica HM-1:IMSS] Length = 304 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 91/305 (29%), Gaps = 33/305 (10%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAV 80 Q ++++++NI +R + + DIV QE+ +++ Sbjct: 8 QTIKILTYNIYCRPPGITARGNDYKKERLMTFCD---EELNKY--DIVAFQELFGAFSSK 62 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++F + + E + K + + + V Q S + Sbjct: 63 RRIFIEKAKQQGFVYEAHLERPKWPIYPVDG-GVCILSRFPIVSQHQKIYTRGCYSDGAS 121 Query: 141 GNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK- 198 + + ++I GK+I + HL++ + + S + Q +I + Sbjct: 122 A-KGVIHTKIDIGFGKEIHLFSTHLQADYY--ESREDNAKSRRHRNTQINECLHFINECT 178 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN----- 253 P + GD N K DDF T+ N+ I + + Sbjct: 179 AYDNDPIIFEGDLNIKGG-TKEYDDFLTTLHSNEFDIEAHDFLFEDKKVHPITHSEVIDG 237 Query: 254 ---------------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +DY +N + ++ + +SDH + Sbjct: 238 EQVDTVITSKVPAPINARLDYIWGIKNGRERKELKAIQTNVCKFQTTNKPFPYMSDHYGV 297 Query: 299 SIDYD 303 + + Sbjct: 298 EVTLE 302 >gi|290976084|ref|XP_002670771.1| predicted protein [Naegleria gruberi] gi|284084333|gb|EFC38027.1| predicted protein [Naegleria gruberi] Length = 551 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 37/296 (12%), Positives = 86/296 (29%), Gaps = 38/296 (12%) Query: 15 PCTASVAQKVRLVSWNIN---TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 + + + S+NI +S ++ + K DI+ L Sbjct: 284 TNLSFPPPTILVCSYNILAQCYISLSRYSNITNQKYLDWEIRKYKIFSVLKERRFDIIGL 343 Query: 72 QEMGSYNA--VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 QE+ + +A + + + +++S + +T + K + L + YP Sbjct: 344 QEIDNQHASQIQFFLEQEGFSVYHSYKNYPKKDGLILAIR-NTKFEIFNKGEKTLVKEYP 402 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + V + G+ +++ HL +Q Sbjct: 403 EVFQY-----------VIARDRVKGRFFCIINCHLTFQPRDTGP----------REKQVN 441 Query: 190 WLKDWITQKKES-LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-PKEKDSRCNA 247 + + I + + + GDFN + + I+ +S+ + Sbjct: 442 EILNQIGKIADPQKTSIIWFGDFNTSPHEKPI-----QLIEACESIPLQKSHDTVQEFWT 496 Query: 248 NKNLRNKIPI-DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + I DY + +S + + SDH P+ ++ Sbjct: 497 CCGTTGRNSIVDYIWHSPSLQVK---DSGPCLEFVPKSSIPDEDHGSDHLPLFAEF 549 >gi|325981641|ref|YP_004294043.1| endonuclease/exonuclease/phosphatase [Nitrosomonas sp. AL212] gi|325531160|gb|ADZ25881.1| Endonuclease/exonuclease/phosphatase [Nitrosomonas sp. AL212] Length = 283 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 36/307 (11%), Positives = 80/307 (26%), Gaps = 53/307 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIVFLQEMG-SYNAVA 81 ++L+SWNI +G D + + + + D++ LQE+ ++ + Sbjct: 1 MKLLSWNIQWGRGMDG-----------RVDLARIIRTIRQIGEFDVICLQEVAVNFPGLP 49 Query: 82 KVFPKNTWCIFYSTERLINHSKRDS-------NNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 +N + + A+ + + L Sbjct: 50 GSRGENQVDELSAQLPGYTAIYGAATDVPDSLGGRSQFGNAIFTRLPVGQIWRHLLPWQA 109 Query: 135 DSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + + + R VE +V + V+ HL+ + + L +A L Sbjct: 110 ELTTPSMQRVLVEAVVTTTEFGLLRVMTTHLEYYSHPQRQV--QIDAIRHLHHEAHTLSQ 167 Query: 194 WITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSL---------I 235 +E F ++ GD N + + + Sbjct: 168 RKFLTEERGGTFEVFPRPGEAILCGDLN-FPATAPEHAQILAPFNDDTPNFHDTWSVLNP 226 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + D+ ++ K L SDH Sbjct: 227 GITHAPTVGIHPVDFVDRAECYDFVLITDGLVKHLKIHGI-----------DAETAASDH 275 Query: 296 CPISIDY 302 P+ ++ Sbjct: 276 QPVWVEL 282 >gi|229164042|ref|ZP_04291979.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803] gi|228619425|gb|EEK76314.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803] Length = 342 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 106/321 (33%), Gaps = 60/321 (18%) Query: 20 VAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 + ++ ++NI G +S ++T + + + +N ++D L Sbjct: 41 QGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKKMLSFLQNENSDFALL 100 Query: 72 QEMGSYNAVAKVFPKNTW-----------CIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 QE+ + + ++ + + + ++ K Sbjct: 101 QEVDIKSLRSFDVNEHEFLKKGLSEYSSSFGKNYDTKWVPVPVTSPMGYAEAGLSTFSKY 160 Query: 121 VRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTY 177 + + L G + R + R VE + +N K ++++HL ++ Sbjct: 161 TVQTAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKFVRLVNLHLSAYDKGG------ 214 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + QQA++LK+++ + ++ ++ GD+N+ ++ + +D + P + Sbjct: 215 ----KIRKQQAEYLKEYMNKHYQNGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWLVELP 270 Query: 238 PKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILYN 281 D + ID F++ N ++ ++ + Sbjct: 271 KGFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKFE 328 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 SDH P+S + Sbjct: 329 N----------SDHNPVSAVF 339 >gi|304311554|ref|YP_003811152.1| hypothetical protein HDN1F_19240 [gamma proteobacterium HdN1] gi|301797287|emb|CBL45507.1| Hypothetical protein HDN1F_19240 [gamma proteobacterium HdN1] Length = 306 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 38/287 (13%), Positives = 82/287 (28%), Gaps = 58/287 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFLQEMGS 76 +RL+S+NI+ + R + D V LQE+ Sbjct: 56 LRLLSYNIHAGLGTSSPHHYVTKSWRNLIPDTKGARRLDRIGSILSGY--DFVALQEVDG 113 Query: 77 YNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + + + RD + + + + Q + L G K Sbjct: 114 GSIRSSFINQVRYFAEQGQFDYWYQQLNRDFGRFGQYSNGILSRYIPYEIQDHKLPGLKG 173 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R A+ + V+ +HL ++Q +L+D I Sbjct: 174 -------RGAIVARYGDLSNPLVVVCLHLALG-------------ERARNRQLAYLRDLI 213 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 ++ GD N + I + + + + + + Sbjct: 214 GI----AEHVIVMGDLNCS----------GEQILATPLRETHLIQANGSHHTYPSWKPQR 259 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ ++ + + ++ LSDH PI+++ Sbjct: 260 SIDHILVSPSLHIRRVEV--------------LDVALSDHRPIAMEI 292 >gi|118477610|ref|YP_894761.1| hypothetical protein BALH_1938 [Bacillus thuringiensis str. Al Hakam] gi|118416835|gb|ABK85254.1| conserved hypothetical protein [Bacillus thuringiensis str. Al Hakam] Length = 264 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 40/292 (13%), Positives = 89/292 (30%), Gaps = 42/292 (14%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + +R+ ++NI + + +++ I+ LQE+ S + Sbjct: 5 SDILRIATFNIWN------------HESLWFERLEAICEEIRSISPHILALQEVRSSVNL 52 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + ++ + +A K + +++ ++S Sbjct: 53 NSKKNVAQY--IAGQIGYPFCIFKEYPDSPDEGLAFLSKIPIIAEEAIWETDIEESNYC- 109 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 A+ + G K V ++HL S + +Q + +WI + Sbjct: 110 ----AIRITFTYKGCKFGVTNVHLNW------------KSSRIRQEQMNTVNNWIENRAS 153 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE--KDSRCNANKNLRNKI--- 255 ++ GDFN + + K + + KN K Sbjct: 154 DYE--LLCGDFNDDPFSMVHQYLIRKHWIDVAQFKEIEENMIAQPTLDYRKNPNLKDDVK 211 Query: 256 ---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D+ ++ +NA + ++ E + S G SDH + +D F Sbjct: 212 QEKRYDWIMIQENAAFEF-PTIENVSIFGESALTSTGMFPSDHYGVFVDLKF 262 >gi|86750015|ref|YP_486511.1| exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2] gi|86573043|gb|ABD07600.1| exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2] Length = 284 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 39/313 (12%), Positives = 80/313 (25%), Gaps = 69/313 (22%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 P AS +++ ++N+N ++ +L + K DIV LQ Sbjct: 17 AFPRGASEEAPLKIATFNVNNVN----------------KRLPVLLGWLKAAKPDIVCLQ 60 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ + + +S +A+ + + + L Sbjct: 61 ELKAAQD----------DFPEAALLKAGYSAAWVGQKTWNGVAILARKRAEIVVTRRALP 110 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 ++ A + V ++ + + Y + + L Sbjct: 111 GDAKDLQSRYLEAAVA-------GMIVGCLYAPNGNPQPGPKFQYKLA------WMKRLN 157 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRF 237 + +S VP V+AGDFN + + Sbjct: 158 RHAAKLLKSGVPVVLAGDFNVVPTPADIYPTRSWDKDALLQPEPRALFAALLKQGWTDAL 217 Query: 238 PKEKDSRCNANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + ID+ ++D + + L + D Sbjct: 218 RALHPEQAPYTFWTYWRNRFERDHGLRIDHLLLDPASAQRLARGGV-------DRAIRGA 270 Query: 290 KRLSDHCPISIDY 302 SDH P I Sbjct: 271 PDASDHAPAWIVL 283 >gi|58038967|ref|YP_190931.1| hypothetical protein GOX0496 [Gluconobacter oxydans 621H] gi|58001381|gb|AAW60275.1| Hypothetical protein GOX0496 [Gluconobacter oxydans 621H] Length = 1750 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 86/313 (27%), Gaps = 55/313 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 Q + + +NI + + + T + Q N D++ LQE+ + Sbjct: 505 QNLLVSDYNIENFNALDPANAD---------RLTQVAQIIVNNLDSPDVLALQEIQDDSG 555 Query: 80 VA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 T+ N S S +I + + V Sbjct: 556 TTNDGTVSAEQNLAAIVKAIADAGGPTYSWAEVD-PTNNASGGVSGGNIRSVFLYNPERV 614 Query: 122 RVLQQSYPLLGAK-DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + + + S + R + E NG+ + ++++HL S L + P Sbjct: 615 TLAAPVTTIGDEELASGTFKNTRLPLVGTFEFNGQSVTLVNVHLSSQAGSSELYGSTQPP 674 Query: 181 CSL---------LSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 + QAQ++ +++ + I GDFN D + Sbjct: 675 VNHGGTTGTVNNRIAQAQYITNYVNGLLTSDPTAKVGILGDFNDT-----EWSDAQQVYA 729 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 E S N +D+ + E+ + Sbjct: 730 NAGLTDMSTTEDPSNRYTYIFEGNAESLDHTIGSSAFASAGKFETIHVNTGSLTGE---- 785 Query: 290 KRLSDHCPISIDY 302 SDH P S+ Sbjct: 786 ---SDHDP-SVTL 794 >gi|294628698|ref|ZP_06707258.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. e14] gi|292832031|gb|EFF90380.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. e14] Length = 607 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 43/326 (13%), Positives = 92/326 (28%), Gaps = 67/326 (20%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++ + ++N+ L + + + + + DIV L+E+ N Sbjct: 302 GELAVATYNVENLDPSDSTF---------DAHASAIVHNLNS--PDIVSLEEIQDDNGAT 350 Query: 82 K-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIH------------- 111 V + S + + + + +I Sbjct: 351 DDGTVGASKTVAKLIDAIVAAGGPRYEWRSIDPVNDQDGGEPGGNIRQVFLFNPARVSFT 410 Query: 112 --------TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 TA+ V K + + + P S + +R+ + G+ ++V+ H Sbjct: 411 DRPGGDSTTAVGVTKVHGKAALTASPGRIDPASDAWKSSRKPLAGEFVFRGRTVFVIANH 470 Query: 164 LKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINY 217 S L Y P S + QA + ++ + + GD N Sbjct: 471 FASKGGDQGLTAQYQPPTRSSETQRHLQATEVNAFVKDILKIQKNADVIALGDMNDF--- 527 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 D K ++ L K N+ +D ++ + + Sbjct: 528 --EFSDTAKILEGRGELWSAIKSLPKNERYTYDYQGNEQVLDQILVSPSIRRGDFAYDSV 585 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302 I D ++SDH P + + Sbjct: 586 HINSEFHD------QISDHDPQVLRF 605 >gi|239941948|ref|ZP_04693885.1| putative exodeoxyribonuclease [Streptomyces roseosporus NRRL 15998] gi|239988412|ref|ZP_04709076.1| putative exodeoxyribonuclease [Streptomyces roseosporus NRRL 11379] gi|291445398|ref|ZP_06584788.1| exodeoxyribonuclease [Streptomyces roseosporus NRRL 15998] gi|291348345|gb|EFE75249.1| exodeoxyribonuclease [Streptomyces roseosporus NRRL 15998] Length = 271 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 76/307 (24%), Gaps = 65/307 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81 + + S N+N L ++ +AD+V LQE+ + Sbjct: 2 LTVTSVNVNGLRAAAKKGF---------------VEWLAATEADVVCLQEVRAELAQLPE 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +V W ++ + + + G + Sbjct: 47 EVGAPEGWHTVHAPAAAKGRAGVSVYSRHAP-----------ERVQIGFGGHGVPGAEEF 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +++ G + V ++L S ++ + Q LK Sbjct: 96 DTSGRYAEIDLPG--VTVASLYLPSGEVGTERQDEKERFMAAFLPYLQGLKARA---AAD 150 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 V+ GD+N + +D + Sbjct: 151 GREVVVCGDWNIAHQEADLKNWKANRKSSGFLPEERAWLTRVLDEAAYVDVVRALHPDVE 210 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + IDY + ++ + + +R SDH Sbjct: 211 GPYSWWSYRGRAFDNDTGWRIDYQMATPGLAGRAVKAWV-------ERAATHAERWSDHA 263 Query: 297 PISIDYD 303 P+++ Y+ Sbjct: 264 PVTVVYE 270 >gi|294012654|ref|YP_003546114.1| exodeoxyribonuclease III [Sphingobium japonicum UT26S] gi|292675984|dbj|BAI97502.1| exodeoxyribonuclease III [Sphingobium japonicum UT26S] Length = 256 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 85/304 (27%), Gaps = 72/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NIN + L ++ DI LQE+ + + Sbjct: 1 MRIATFNING----------------IKARLPRLLEWLDETRPDIACLQEIKTSDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-VLQQSYPLLGAKDSFSRAGN 142 + + +A+ + V + +D SR Sbjct: 41 ------TFPVRDIEDVGYGAIWHGQKGFNGVAILARGETPVEVRRGLEGEPEDEHSRY-- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +E + K + V I+L + + Y + + L+D Q Sbjct: 93 -------LEADVKGLRVASIYLPNGNPQPGPKFDYK------LRWMKRLRDRAAQIWAEE 139 Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 VP ++AGD+N + + + + + + R Sbjct: 140 VPAILAGDYNVIPRDRDVYSVKAMAEDALMQPESRAAYRRLLGDGWTDAIASRHPAGRVW 199 Query: 247 ANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID+ ++ A LI D ++ SDH P Sbjct: 200 TYWDYQMNAWPRDAGFRIDHLLLSPAAADRLIDAQV-------DKDFRGREKASDHAPTW 252 Query: 300 IDYD 303 ++ Sbjct: 253 VELS 256 >gi|171682868|ref|XP_001906377.1| hypothetical protein [Podospora anserina S mat+] gi|170941393|emb|CAP67043.1| unnamed protein product [Podospora anserina S mat+] Length = 619 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 83/331 (25%), Gaps = 71/331 (21%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSY 77 + + + S+N+ LS ++ L+ + D +FLQE+ Sbjct: 298 QCKAITVGSYNVENLSP-------------SSEHLPLIASHVVTYLKSPDFLFLQEVQDN 344 Query: 78 NAVA-------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + K T+ N +I A Sbjct: 345 SGPTNNDGITSANLTLSALAASIKAAGGPTYEFAEVAPATPNLDGGQPGGNIRPAYLYNP 404 Query: 119 KNVRV------------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 + + P + + +R+ V G Sbjct: 405 AIISLYKPNQGQGDDATSVVKGSGKNSPPSLTFNPGRIEPANPAWTASRKPVVGAWVAKG 464 Query: 155 --KKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFV 206 K + +++H S SL P + QA +I+Q + + Sbjct: 465 ATKPFFTVNVHFGSKGGGSSLHGDRRPPINGGVTDRLAQANVTATFISQILNADPKAAVI 524 Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 AGDFN + I L K + N +D+ + + Sbjct: 525 SAGDFNEFSFVRPMK--TFAEISKMKDLDEVAGIKPTERYTYAFDMNAQALDHMYVSPSL 582 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + S + +SDH P Sbjct: 583 AASSKSDFEHIH---VNTWGSYAEMVSDHDP 610 >gi|146419034|ref|XP_001485482.1| hypothetical protein PGUG_03211 [Meyerozyma guilliermondii ATCC 6260] Length = 290 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 84/310 (27%), Gaps = 37/310 (11%) Query: 4 KYVLALVFFLVPCTASVAQKV--RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 K+++ L + ASV + + R+ +NI T S V K +R ++ Y Sbjct: 7 KFLVFLFVTSLAWAASVQKPLTFRVYDFNIKTASGNL-VPGEKPWSERKAGVIDSIKNYT 65 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 IV LQE + + + I + Sbjct: 66 SQH-PTIVGLQEALRGQL------DDIMKGLGPEWKFFGVGGSGDTKGEYCPIIYKSNEW 118 Query: 122 RVLQQSYPLLG-----AKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLE 174 ++ + L + R + +G+ I + HL Sbjct: 119 ELVNGTTKWLSETPDKPSRGYGSKYERIVTFAELRHVSSGRTIHYFNTHLDP-------- 170 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI-DPNDS 233 + + + + ++ P + GDFN K + Sbjct: 171 ----HDDHVRYESVRDIITYVN-HTRQGSPVFLGGDFNAKRTSAPYKYVATQMTPALIAP 225 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + K+ N+ + ID+ + LY S +S Sbjct: 226 DPKGVDNKEKSTNSGFQFNHPKTIDFIFFQDH------GSKVKVDLYEILSSTSGNVVIS 279 Query: 294 DHCPISIDYD 303 DH P+ D+ Sbjct: 280 DHSPVIADFS 289 >gi|229072559|ref|ZP_04205761.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185] gi|229082318|ref|ZP_04214781.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2] gi|228700750|gb|EEL53273.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2] gi|228710535|gb|EEL62508.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185] Length = 352 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 108/324 (33%), Gaps = 64/324 (19%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T ++ + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117 LQE+ + + F N S + + ++ Sbjct: 110 LQEVDIKSL--RSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTF 167 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLE 174 K + + L G + R + R VE + +N GK + ++++HL + Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA-------- 219 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 Y + QQ ++LK+++ + E+ ++ GD+N+ ++ +D + P + Sbjct: 220 --YDEGGKIRKQQVEYLKEYMNKHYENGDYVIMGGDWNQLVSNAQLSDPKFVKERPEWLV 277 Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278 D + ID F++ N ++ ++ Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 335 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P+S + Sbjct: 336 KFEN----------SDHNPVSAVF 349 >gi|30023103|ref|NP_834734.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus ATCC 14579] gi|229049761|ref|ZP_04194318.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676] gi|229112516|ref|ZP_04242053.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15] gi|229130328|ref|ZP_04259287.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4] gi|29898663|gb|AAP11935.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus cereus ATCC 14579] gi|228653261|gb|EEL09140.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4] gi|228670896|gb|EEL26203.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15] gi|228722674|gb|EEL74062.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676] Length = 352 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 108/324 (33%), Gaps = 64/324 (19%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T ++ + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117 LQE+ + + F N S + + ++ Sbjct: 110 LQEVDIKSL--RSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVPIINPMGYAEAGLSTF 167 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLE 174 K + + L G + R + R VE + +N GK + ++++HL + Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA-------- 219 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 Y + QQ ++LK+++ + E+ ++ GD+N+ ++ +D + P + Sbjct: 220 --YDEGGKIRKQQVEYLKEYMNKHYENGDYVIMGGDWNQLVSNAQLSDPKFVKERPEWLV 277 Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278 D + ID F++ N ++ ++ Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 335 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P+S + Sbjct: 336 KFEN----------SDHNPVSAVF 349 >gi|46115046|ref|XP_383541.1| hypothetical protein FG03365.1 [Gibberella zeae PH-1] Length = 285 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 42/301 (13%), Positives = 93/301 (30%), Gaps = 26/301 (8%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 + +++ + C K +++N+ L E + ++ L+ Sbjct: 9 QLLVSTLALSSLCLGQKTGKFNFLTYNVAGLPEIINGNDVPGDK---KTNSNLIGTAFAT 65 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 DIV +QE +Y+A + +R + ++T Sbjct: 66 QGFDIVHMQEDFNYHA-------YIYATDNHPQRTPTSGGVPFGDGLNTVANYPWSTFSR 118 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + + L + D + + + + I G ++ + ++H + Sbjct: 119 KKWNKCNLNSGDCLT---PKGFSFMRMAIGGVEVDLYNLHADAGS--------DQGDVDA 167 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 S + +I + +I GD N + G K D S + Sbjct: 168 RSAGIDQVLAYINSN-SNGRAVIIGGDTNDRWTNAG--RSLNKLTDAGFSDAWVQLIQGD 224 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 C +D + L SF+ + + ++ G LSDH P+ +D+ Sbjct: 225 PCKVPAADNKCEIVDKVFYRSGSSVKLSATSFNYVP--KLFLQPDGNILSDHNPVLVDFT 282 Query: 304 F 304 + Sbjct: 283 Y 283 >gi|331662145|ref|ZP_08363068.1| putative cytoplasmic protein [Escherichia coli TA143] gi|331060567|gb|EGI32531.1| putative cytoplasmic protein [Escherichia coli TA143] Length = 253 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 46/283 (16%), Positives = 86/283 (30%), Gaps = 48/283 (16%) Query: 28 SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV---- 83 S+N+ T++ +G + + LR + + ADIV LQE+ + V + Sbjct: 9 SFNVLTINIHKGFTAFNRRF-----ILPELRDAVRTVSADIVCLQEVMGAHEVHPLHVEN 63 Query: 84 FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +P + F + + + + + H AV + S A Sbjct: 64 WPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVSVDGAE 118 Query: 142 NRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + + GK I V+ +HL + Q L +W+ + Sbjct: 119 KRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEWVNE-L 164 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 P ++AGDFN + +D F + + +D Sbjct: 165 PDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPLLRLDR 219 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + LSDH P+S + Sbjct: 220 IYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251 >gi|306843439|ref|ZP_07476040.1| exodeoxyribonuclease III [Brucella sp. BO1] gi|306276130|gb|EFM57830.1| exodeoxyribonuclease III [Brucella sp. BO1] Length = 268 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 35/308 (11%), Positives = 79/308 (25%), Gaps = 72/308 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 + +WNIN L+ Q+ ++ D++ LQE A Sbjct: 3 FSIATWNIN----------------SVRLRMPLVEQFLRDYQPDVLCLQETKCPDDQFPA 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K F + S + +A + + D Sbjct: 47 KGFRALGYEHIA-----------ISGQKGYHGVATVSRRPLDGVEKVDFCNMGDCRH--- 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +VE +K+ + + ++ + D + +P + + ++ I +K+ Sbjct: 93 ----LSAVVEAGDRKLRIHNFYVPAG--GDEPDPAINPKFAHKLAFLEEMRAIIADRKD- 145 Query: 202 LVPFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRC 245 ++ GD N N + ++ K + + Sbjct: 146 GCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRIKGGWSDLMRHLIAADQ 205 Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ + + R SDH Sbjct: 206 KIFTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG-------LQVLRDARGWDRPSDH 258 Query: 296 CPISIDYD 303 P+ +D Sbjct: 259 VPVIATFD 266 >gi|326790354|ref|YP_004308175.1| exodeoxyribonuclease III [Clostridium lentocellum DSM 5427] gi|326541118|gb|ADZ82977.1| exodeoxyribonuclease III [Clostridium lentocellum DSM 5427] Length = 251 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 80/304 (26%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VSWN+N + Y K +DAD+ +QE ++ Sbjct: 1 MKCVSWNVNGVRAVLTKGF---------------LDYFKAVDADVFCIQETKCQEGQVEI 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + ++ A+ K + + D+ R Sbjct: 46 ELPGYYQYWNYAQ-----------KKGYSGTALFSKKEPLSVSYGLGIAEHDTEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ ++ +V+ ++ + + + + L++ Sbjct: 91 -----VITAEFEEAYVVTVYTPNAQNELARIDYRMAWEDAFKAYLKKLEE--------NK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P +I GD N + + + F A Sbjct: 138 PVIICGDLNVAHQEIDLKNPKTNRGNAGFSDEERGKFGELLEAGFIDTFRYFYPDLEGAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ + L+ + SDHCP+ Sbjct: 198 SWWSYRFKAREKNTGWRIDYFLASEVLKDKLVGAAI-----------DAEILGSDHCPVI 246 Query: 300 IDYD 303 ++ + Sbjct: 247 LEIN 250 >gi|228942241|ref|ZP_04104781.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975171|ref|ZP_04135730.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981810|ref|ZP_04142105.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407] gi|228777922|gb|EEM26194.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407] gi|228784692|gb|EEM32712.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817575|gb|EEM63660.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942895|gb|AEA18791.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 352 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 108/324 (33%), Gaps = 64/324 (19%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T ++ + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117 LQE+ + + F N S + + ++ Sbjct: 110 LQEVDIKSL--RSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTF 167 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLE 174 K + + L G + R + R VE + +N GK + ++++HL + Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA-------- 219 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 Y + QQ ++LK+++ + E+ +I GD+N+ ++ +D + P + Sbjct: 220 --YDEGGKIRKQQVEYLKEYMNKHYENGDYVIIGGDWNQLVSNAQLSDPKFVKERPEWLV 277 Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278 D + ID F++ N ++ ++ Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 335 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P+S + Sbjct: 336 KFEN----------SDHNPVSAVF 349 >gi|258405188|ref|YP_003197930.1| exodeoxyribonuclease III [Desulfohalobium retbaense DSM 5692] gi|257797415|gb|ACV68352.1| exodeoxyribonuclease III [Desulfohalobium retbaense DSM 5692] Length = 255 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 75/305 (24%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL SWN+N W + D D++ LQE A Sbjct: 1 MRLYSWNVNGFRAVVQKGFW---------------DWFAQCDGDVICLQE---TKATLDQ 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ + + ++ +A + V G D + R Sbjct: 43 VPEKHQHVNTHQIIWNG----ATVKKGYSGVACFARTPPVHWSR----GLPDMQYQGEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + ++L+I+ + + A+ L+ Sbjct: 95 -----TLLLEYRDFYLLNIYFPNGQMSQERLDYKMGFYDAFFDYAEHLRQ--------TK 141 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N I + S Sbjct: 142 PVIVCGDLNTAHTEIDLKNPKANADRSGFLPEERAWIDTFISHG--YHDTFRMFTSEGGH 199 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF + + + +Y SDHCPI Sbjct: 200 YSWWTYRFNARARNAGWRIDYFFVSDELTGRVRNAWIEDTVY-----------GSDHCPI 248 Query: 299 SIDYD 303 ++ D Sbjct: 249 GLEID 253 >gi|89902379|ref|YP_524850.1| endonuclease/exonuclease/phosphatase [Rhodoferax ferrireducens T118] gi|89347116|gb|ABD71319.1| Endonuclease/exonuclease/phosphatase [Rhodoferax ferrireducens T118] Length = 287 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 42/287 (14%), Positives = 83/287 (28%), Gaps = 48/287 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV-- 80 +++++ NI+ LR+ +++ AD+VFLQE+ +A Sbjct: 42 SIKVLTVNIHKGFTFFNRKF----------ILHELREAVRSVGADVVFLQEVTGSHARHE 91 Query: 81 AKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 +V T + S + + H AV K V +++ + Sbjct: 92 RRVADYPTNPHYEFLADSIWPQFAYGRNAVYPGGHHGNAVLSKFHIVSFENHDVSIIG-- 149 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R + ++++ G V I + + S Q L D + Sbjct: 150 ---PERRGLLHCVLQVPGLDTQVHVICVHLGL-----------AESHRLLQLHMLCDLVH 195 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 Q + P ++AGDFN + F + + Sbjct: 196 QHIPASAPVIVAGDFND-----WRRRAHAVLAQGANLHEVFVQAYGKAARTFPARLPVLA 250 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D + + LSDH P++ + Sbjct: 251 LDRIYVRNAIGHAPLVLPIR-----------PWSHLSDHAPLAATIE 286 >gi|103487661|ref|YP_617222.1| exodeoxyribonuclease III (xth) [Sphingopyxis alaskensis RB2256] gi|98977738|gb|ABF53889.1| Exodeoxyribonuclease III [Sphingopyxis alaskensis RB2256] Length = 256 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 85/304 (27%), Gaps = 72/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + L ++ + D+ LQE+ S + Sbjct: 1 MKIATFNING----------------IKARLPRLIEWLEERQPDVACLQELKSSDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV-RVLQQSYPLLGAKDSFSRAGN 142 + + +A+ K V Q A+D SR Sbjct: 41 ------TMPTKEIEAAGYGFLYHGQKGFNGVAILAKGADPVEVQRGLAGEAEDEQSRY-- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +E + I V I+L + + Y + L++ + Sbjct: 93 -------LEADAHGIRVASIYLPNGNPQPGPKFDYK------LRWMARLRERARMLLAAE 139 Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 +P V+AGD+N + + D +++ + + + Sbjct: 140 IPTVLAGDYNVIPHDDDVWDPRAMATDALMQPESRDAWFRLLGDGWTDALRSRHPAGHVW 199 Query: 247 ANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID+ ++ L+ D ++ SDH P Sbjct: 200 TYWDYQAGAWQRDHGFRIDHLLLSPALADRLVDAGV-------DKDHRGREKASDHAPTW 252 Query: 300 IDYD 303 + Sbjct: 253 VVLS 256 >gi|260574458|ref|ZP_05842462.1| exodeoxyribonuclease III Xth [Rhodobacter sp. SW2] gi|259023354|gb|EEW26646.1| exodeoxyribonuclease III Xth [Rhodobacter sp. SW2] Length = 262 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 75/305 (24%), Gaps = 71/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 L +WNIN++ +EG+ + + DI+ LQE S + Sbjct: 3 FTLATWNINSVRLREGL----------------VARLMAEEAPDILCLQECKSPVDKIPL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + L + +A+ K + + Sbjct: 47 ---------EQFQALGYRYMVARGQKGYNGVAILSKLPIMDAGDRDFASMGHARH----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V +E + + + ++ + D + + ++DW +K Sbjct: 93 --VAARLENG---VTIHNCYVPAG--GDIPDRDQNEKFGQKLDFLTEMRDWCRWEKPDRA 145 Query: 204 PFVIAGDFNRKINYLG--NNDDFWKTID-------------PNDSLIRFPKEKDSRCNAN 248 ++ GD N ++ K + S + + Sbjct: 146 --ILVGDLNIAPREDDVWSHKALLKIVSHTPIEVDHLTAVMEAGSWVDVTRADIPEGPLY 203 Query: 249 KNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +D+ + ++ SDH P+ Sbjct: 204 SWWSYRAAEWGAADKGRRLDHIWATPDIASAAHSS-------RILRAARGWQQPSDHAPV 256 Query: 299 SIDYD 303 +D Sbjct: 257 FATFD 261 >gi|123476231|ref|XP_001321289.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas vaginalis G3] gi|121904112|gb|EAY09066.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas vaginalis G3] Length = 339 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 95/301 (31%), Gaps = 25/301 (8%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY- 77 +K++++ +N + + + R+ + +Y D+V LQE + Sbjct: 47 FQTKKLKILDFNAFWRPQLLHLFKEEYMRDRSKILLERISEY------DVVCLQEGFQFG 100 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + ++K F + + + ++ I + + + K + F Sbjct: 101 SDISKNFIEAANALGFKYVLTSKLPPLLNHQVIDSGLVIISKFPILESDCVRYTAGC-GF 159 Query: 138 SRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + A+ ++++ + + HL++ ++ + Q L + Sbjct: 160 DAFAAKGALYAKIQLDEKNHVHLFSTHLQASY--QYGKDPTDVDVKVRQSQFDELSALMA 217 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA--------- 247 QK P ++ GD N + + K + KD + Sbjct: 218 QKVTDGYPAIVVGDLNVNARFGDEYLNLLKHFTIPNYESVDTLLKDYGEHPITFGNMEDV 277 Query: 248 ----NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + IDY + + L E S++ + G LSDH + ++ Sbjct: 278 TLTEPYFQKTVQSIDYIFLFEKEQSPLKVEYKSKVNEMRVQNQPYGF-LSDHFAVESEFT 336 Query: 304 F 304 F Sbjct: 337 F 337 >gi|71898520|ref|ZP_00680691.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella fastidiosa Ann-1] gi|182681462|ref|YP_001829622.1| exodeoxyribonuclease III Xth [Xylella fastidiosa M23] gi|71731644|gb|EAO33704.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella fastidiosa Ann-1] gi|182631572|gb|ACB92348.1| exodeoxyribonuclease III Xth [Xylella fastidiosa M23] gi|307579913|gb|ADN63882.1| exodeoxyribonuclease III Xth [Xylella fastidiosa subsp. fastidiosa GB514] Length = 264 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 86/306 (28%), Gaps = 77/306 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+R+ SWN+N+L+ + L+Q+ D++ LQE Sbjct: 2 KMRIASWNVNSLN----------------VRLSQLQQWLVEAAPDVLGLQET-------- 37 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + + + +A+ + Q Sbjct: 38 --KLEDHQFPEAALAALGYVSVYAGQKTYNGVALLARVALEDVQV------GIPEFEDVQ 89 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 RR + V+ I V+++++ + + + + Y S + W+ ++ + Sbjct: 90 RRVIAATVD----GIRVVNLYVVNGQEVGTDKYAYKLS------WLDAVYHWLAEELQRY 139 Query: 203 VPFVIAGDFNRKINYLGNND-----------------DFWKTIDPNDSLIRFPKEKDSRC 245 V+ GDFN + D K + L + Sbjct: 140 PRLVVLGDFNIAPDARDVYDPQVWNEDHILTSTTERAALDKLLGLG--LHDGFRLHHQDA 197 Query: 246 NANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + ID ++ + + D + +R SDH Sbjct: 198 GIFSWWDYRQASFRRNRGLRIDLTLVSEALRAQAVASGI-------DRVPRGWERPSDHA 250 Query: 297 PISIDY 302 P I+ Sbjct: 251 PAWIEL 256 >gi|206975161|ref|ZP_03236075.1| putative secreted protein [Bacillus cereus H3081.97] gi|206746582|gb|EDZ57975.1| putative secreted protein [Bacillus cereus H3081.97] Length = 264 Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 40/289 (13%), Positives = 87/289 (30%), Gaps = 42/289 (14%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NI + + + + I+ LQE+ S + Sbjct: 8 LRIATFNIWN------------HDSLWLERLEAICEEIRTISPHILALQEVRSCVNLNSK 55 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + D +A K + +++ ++S Sbjct: 56 KNVAQYIAGQIGYPFGIFKEYPDSPDE--GLAFLSKIPIIAEEAIWETDIEESNYC---- 109 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A+ + G K V ++HL S + +Q + +WI + Sbjct: 110 -AIRITFTYKGCKFGVTNVHLNW------------KSSRIRQEQMNTVNNWIENRASDYE 156 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE--KDSRCNANKNLRNKI------ 255 ++ GDFN + + K + + KN K Sbjct: 157 --LLCGDFNDDPFSMVHQYLIRKHWIDVAQFKEIEENMIAQPTLDYRKNPNLKDDVKQEK 214 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D+ ++ +NA + ++ + + S G SDH + +D F Sbjct: 215 RYDWIMIQENAAFEF-PTIENVSIFGDSALNSTGMFPSDHYGVFVDLKF 262 >gi|260682949|ref|YP_003214234.1| putative exodeoxyribonuclease [Clostridium difficile CD196] gi|260686547|ref|YP_003217680.1| putative exodeoxyribonuclease [Clostridium difficile R20291] gi|260209112|emb|CBA62286.1| putative exodeoxyribonuclease [Clostridium difficile CD196] gi|260212563|emb|CBE03542.1| putative exodeoxyribonuclease [Clostridium difficile R20291] Length = 255 Score = 85.8 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 81/306 (26%), Gaps = 82/306 (26%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ +SWN+N + G + K +DADI LQE Sbjct: 5 SMKFISWNVNGIRACVGKGF---------------LDFFKEVDADIFCLQETKLQEG-QI 48 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + +++ +S + Sbjct: 49 ELDLPGYFQYWNYAERKGYSGTAIFTK-----------------------------KEPL 79 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT--QKKE 200 + + +E + K+ V+ + + F F+ L + +W D+I K + Sbjct: 80 KVMYGINIEEHDKEGRVITLEFEDFYFVTVYTPNSQSELKRLEYRTRWEDDFIDYLTKLD 139 Query: 201 SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + P ++ GD N + + + + + + + Sbjct: 140 NHKPVIVCGDMNVAHKEIDLKNPKNNMKNAGFTKEEREKFSKLLDSGFIDTYRYFNPDKE 199 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + IDYF + L+ + SDHC Sbjct: 200 GVYSWWSYRFNARKNNAGWRIDYFCASKKLEDRLVSADIHTEIL-----------GSDHC 248 Query: 297 PISIDY 302 P+ ++ Sbjct: 249 PVELEI 254 >gi|93004917|ref|YP_579354.1| endonuclease/exonuclease/phosphatase [Psychrobacter cryohalolentis K5] gi|92392595|gb|ABE73870.1| Endonuclease/exonuclease/phosphatase [Psychrobacter cryohalolentis K5] Length = 257 Score = 85.8 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 39/284 (13%), Positives = 79/284 (27%), Gaps = 50/284 (17%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L S+NI+ S + Q + +DI+ LQE+ N + + Sbjct: 14 LTSYNIH----------KGMSPMNRQVKVQGIAQALDIIGSDILCLQEVQGQN-LKRNIQ 62 Query: 86 KNTWCIFYSTERLI-------NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 N + E ++ K ++ H AV + P + + Sbjct: 63 YNEYPDQSQHEWFGEYLQLENSYGKNSEYDNGHHGNAVLSRFPL-----DPKHNVNITVN 117 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + R + V+ G ++ V+ + F +Q + + +++ + Sbjct: 118 KLEQRGVLHCEVQPVGWEVPVVVLCAHLNLF-----------ERDRIKQYEAISNYVRDE 166 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 P ++AGDFN + F + +D Sbjct: 167 IAPDQPLILAGDFNDWKKMS-----CDRLASSLGMTEAFKHCHGKLLPTFPAKLPVLSLD 221 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + LSDH P+S + Sbjct: 222 RIYVRN---LRIKDAWVH--------TGKPWSTLSDHLPLSAEL 254 >gi|134103032|ref|YP_001108693.1| AP endonuclease [Saccharopolyspora erythraea NRRL 2338] gi|291005211|ref|ZP_06563184.1| AP endonuclease [Saccharopolyspora erythraea NRRL 2338] gi|133915655|emb|CAM05768.1| AP endonuclease, family 1:exodeoxyribonuclease III xth [Saccharopolyspora erythraea NRRL 2338] Length = 265 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 36/308 (11%), Positives = 71/308 (23%), Gaps = 71/308 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 + + + N+N L ++ +D+V +QE A Sbjct: 2 LTVSTVNVNGLRAAAKKGF---------------VEWLAATGSDVVCMQETRAEPDQLPA 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 V W + S + + +A+ + + D R Sbjct: 47 AVRSPEGWHTQLAP----------SADKGRSGVAIYSRREPDEVRVGFGSAEFDESGRY- 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 VE + V ++L S ++ L+ + + Sbjct: 96 --------VEATFGDVVVASLYLPSGDVGTPRQDEKERFMKEFLVHLTDLRARA---EAA 144 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ GD+N + D + + Sbjct: 145 GKQALVCGDWNIAHREIDLKNWKGNQKSAGFLPEERAWLTQVFDEVGYVDVVRRLHPEGP 204 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + IDY + S KR SDH Sbjct: 205 GPYSWWSYRGKAFDNDSGWRIDYLAATPALAERCTDAFVE-------RAPSYDKRWSDHA 257 Query: 297 PISIDYDF 304 P++ +DF Sbjct: 258 PVTAVFDF 265 >gi|89900093|ref|YP_522564.1| endonuclease/exonuclease/phosphatase [Rhodoferax ferrireducens T118] gi|89344830|gb|ABD69033.1| Endonuclease/exonuclease/phosphatase [Rhodoferax ferrireducens T118] Length = 252 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 87/285 (30%), Gaps = 54/285 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 VR+ ++NI+ + + + L + LD+DIV LQE+ N + Sbjct: 4 VRVATYNIH--------KGVQGIGPQRRLEIHNLGHAVEQLDSDIVCLQEVRLLN-RREA 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSN------NDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 W E L A+ + V Q S Sbjct: 55 QHFTRWPELSQAEFLAPEGYEAVYHTNAFTRHGEHGNAMLSRWPVVAYQQ-----EDISD 109 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R R + + V ++G+ + V+ +HL + ++Q L+ ++ + Sbjct: 110 HRFEQRGLLHVEVLVHGRAVHVVVVHLGLIK-------------ASRARQIAQLQRFVAR 156 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 + + P ++AGDFN + + +R + + Sbjct: 157 EVPPMAPLLVAGDFNDWGS----------LVQRALDATNLKTFTGARHPTYPARLPLVQL 206 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 DY L+ R+SDH P+ ++ Sbjct: 207 DYVYARG-----LVPLGVQVPQGRI------WSRMSDHLPLIAEF 240 >gi|229105686|ref|ZP_04236317.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28] gi|228677734|gb|EEL31980.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28] Length = 352 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 44/322 (13%), Positives = 106/322 (32%), Gaps = 60/322 (18%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T ++ + + +N ++D Sbjct: 50 AQGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMG----------SYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKK 119 LQE+ + + K P + + ++ K Sbjct: 110 LQEVDIKSMRSFDINGHEFLKKGLPDYASSFGKNYDTKWVPVPITSPMGYADAGLSTFSK 169 Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENT 176 + + L G + R + R VE + +N K ++++HL + Sbjct: 170 YTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHKIPVNNGKFVRLVNLHLSA---------- 219 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 Y + QQ ++LK+++ + ++ ++ GD+N+ I+ +D + P+ + Sbjct: 220 YDEGGKIRKQQVEYLKEYMNKHYKNGDYVIMGGDWNQLISNAQLSDPKFVKERPDWLVEL 279 Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280 D + ID F++ N ++ ++ + Sbjct: 280 PKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 337 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 SDH P+S + Sbjct: 338 EN----------SDHNPVSAVF 349 >gi|183234893|ref|XP_001914105.1| phospholipase C precursor [Entamoeba histolytica HM-1:IMSS] gi|169800852|gb|EDS89119.1| phospholipase C precursor, putative [Entamoeba histolytica HM-1:IMSS] Length = 304 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 91/305 (29%), Gaps = 33/305 (10%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAV 80 Q ++++++NI +R + + DIV QE+ +++ Sbjct: 8 QTIKILTYNIYCRPPGITARGNDYKKERLMTFCD---EELNKY--DIVAFQELFGAFSSK 62 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++F + + E + K + + + V Q S + Sbjct: 63 RRIFIEKAKQQGFVYEAHLERPKWPIYPVDG-GVCILSRFPIVSQHQKIYTRGCYSDGAS 121 Query: 141 GNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK- 198 + + ++I GK+I + HL++ + + S + Q +I + Sbjct: 122 A-KGVIHTKIDIGFGKEIHLFSTHLQADYY--ESREDNAKSRRHRNTQISECLHFINECT 178 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN----- 253 P + GD N K DDF T+ N+ I + + Sbjct: 179 AHDNDPIIFEGDLNIKGG-TKEYDDFLTTLHSNEFDIEAHDFLFEDKKVHPITHSEVIDG 237 Query: 254 ---------------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +DY +N + ++ + +SDH + Sbjct: 238 EQVDTVITSKVPAPINARLDYIWGIKNGRERKELKAIQTNVCKFQTTNKPFPYMSDHYGV 297 Query: 299 SIDYD 303 + + Sbjct: 298 EVTLE 302 >gi|294650031|ref|ZP_06727419.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|292824124|gb|EFF82939.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 822 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 45/320 (14%), Positives = 90/320 (28%), Gaps = 46/320 (14%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSYNAV 80 +R ++N+ N + + G + + + D + + +DADI L E+ + Sbjct: 468 IRAAAFNVLNYDNGKNGFPTERGATSQAEFDKQHRKIVSAMRAIDADIYGLMEIANNGFG 527 Query: 81 AKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + R + R + I AI K V+ + + L D Sbjct: 528 EDSAIAYLTRALGADWRYVVPENLDRLGTDAIAVAIIYNSKRVKPVNKPVVL----DLGD 583 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCF--------LDSLENTYSPSCSLLSQQAQW 190 + A + + V+ HLKS ++ + + Sbjct: 584 KNRTTIAQTFQPISGKQMLTVIPNHLKSKSCSGVNAASLDADQKDGQGCWNPTRVKAVEQ 643 Query: 191 LKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 L W + ++ GD N + + L + + + Sbjct: 644 LIQWAAKNPTQVETPNILLLGDMNSYAKEDPI--LALEKANYKVLLNDKTIGQGEQAYSY 701 Query: 249 KN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------- 289 +D+ + D N Y + + I +E + Sbjct: 702 VFGVSSNAEGYGGAGNLDHAIADSNLYSKVKKAFVWHINADEPTVLDYNEEYKTDEQKAL 761 Query: 290 ------KRLSDHCPISIDYD 303 R SDH P+ +D D Sbjct: 762 FFAEDPYRSSDHDPVIVDID 781 >gi|290956218|ref|YP_003487400.1| hypothetical protein SCAB_17031 [Streptomyces scabiei 87.22] gi|260645744|emb|CBG68835.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 305 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 32/285 (11%), Positives = 72/285 (25%), Gaps = 35/285 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +S+N+ + + + + ++ QE + Sbjct: 49 LSTMSFNLRYANTV--------RPHSWAVRRPVTKALLRQEAPHVIGTQEGLHQQLLDIE 100 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + T R + T + P + +++ R Sbjct: 101 TDLGGNHRWIGTGRAGGNRDEFMAVFYDTRRLAPVEYRHFWLSDTPEVPGSNTWGGGSIR 160 Query: 144 RAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + G++ +VL+ HL + +A L + Sbjct: 161 MVTWVRFRDLLDGGREFYVLNTHLDNLS-------------QYARDRAAALIVRRIAGFD 207 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFW-KTIDPNDSLIRFPKEKDSRCNANKNLRNKI-PID 258 +P V+ GDFN + D + + + + + L ID Sbjct: 208 RSLPLVVTGDFNVAAHRNPVYDTMLDAGLVDTWDAAAERTDLYATFHGYRPLTPGGDRID 267 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + + S G+ SDH P+ Sbjct: 268 WILTTP---------GVTAHRAAVNTFASNGQYPSDHLPVQATLT 303 >gi|261329150|emb|CBH12129.1| RNA-editing complex protein MP100 [Trypanosoma brucei gambiense DAL972] Length = 894 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 45/301 (14%), Positives = 87/301 (28%), Gaps = 35/301 (11%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSL--WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 V ++L++WN+ + + Y ++ + + DAD+V +QE+ Sbjct: 611 AGPVKASLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPKRYPVIAKIIEEEDADVVGMQEV 670 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + F S LI S + AIA + + ++ P+ Sbjct: 671 E-----------PVFWEFLSKRPLIRQRYYFSCGHMSPAIAPWGVLMLIHRRRLPVQSIN 719 Query: 135 DSFSRAGNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 A + +++ + + HL + S +L + L Sbjct: 720 YLNVPAWTNHVSLMPVVGLKMVHGTVHIAAAHLLAPYTKSHENARTSQDTALRHHMTKTL 779 Query: 192 KDWITQKKESLVPFVIAGDFNRKIN------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 V GDFN + D W + PND E ++ C Sbjct: 780 ---------GGGDVVTMGDFNDWPTNEFIMPHESQYVDCWPVLHPNDPGKTM-DETNTFC 829 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDY 302 D + + N+++ + SDH +SI + Sbjct: 830 KLKVEEMFFGRSDKVFLRSRRLVPVEAHLVGTRSVNDENNNADAPAYLFPSDHYGVSITF 889 Query: 303 D 303 Sbjct: 890 S 890 >gi|26989426|ref|NP_744851.1| exodeoxyribonuclease III, putative [Pseudomonas putida KT2440] gi|24984291|gb|AAN68315.1|AE016465_8 exodeoxyribonuclease III, putative [Pseudomonas putida KT2440] Length = 265 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 79/304 (25%), Gaps = 70/304 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + +++ ++NIN S L + + DI LQE Sbjct: 2 KALKIATFNING----------------IRSRLPALLAWLEREQPDIACLQE-------- 37 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +A+ + L+ L G ++ Sbjct: 38 --LKAADQQFPRAELEAAGYGSLHHGQPSWNGVAILVRGSDPLEVRRGLPGLEEDSQSRY 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 A ++ V ++L + L + Y + L +ES Sbjct: 96 LEAAAHGVL--------VACLYLPNGNPLPGPKFDYK------LHWFECLIQHARSLQES 141 Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246 P ++AGDFN + ++ + L Sbjct: 142 GHPTLLAGDFNVVPTDMDIYNPRSWLKDALLQPESRACYQRLLDQGWLDAIRHLYPDERV 201 Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++++ +L + D + SDH P+ Sbjct: 202 YTFWDYFRNHWARNAGLRIDHLLLNRELAPYLKRAGV-------DAWVRNQAKASDHAPV 254 Query: 299 SIDY 302 I+ Sbjct: 255 WIEL 258 >gi|125972979|ref|YP_001036889.1| exodeoxyribonuclease III Xth [Clostridium thermocellum ATCC 27405] gi|256004776|ref|ZP_05429751.1| exodeoxyribonuclease III Xth [Clostridium thermocellum DSM 2360] gi|125713204|gb|ABN51696.1| exodeoxyribonuclease III Xth [Clostridium thermocellum ATCC 27405] gi|255991226|gb|EEU01333.1| exodeoxyribonuclease III Xth [Clostridium thermocellum DSM 2360] gi|316940785|gb|ADU74819.1| exodeoxyribonuclease III Xth [Clostridium thermocellum DSM 1313] Length = 251 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 74/302 (24%), Gaps = 78/302 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +L+SWN+N L Y K DADI +QE Sbjct: 3 KLISWNVNGLRACINKGF---------------LDYFKKADADIFCIQESKVQPG-QIEL 46 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + + +++ +S I PL +R Sbjct: 47 ELDGYHQYWNYAERKGYSGTAVFTRIK-----------------PLCVQNGIGIDEHDRE 89 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + +E + ++++++ + + L ++ P Sbjct: 90 GRVITLEFDN--YYLVNVYTPNAKKELERLDYRMKWEDDFRNYLVGL--------KAKKP 139 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GD N + + + F + A Sbjct: 140 VIVCGDMNVAHKEIDLKNPESNRRSAGFTDEERAKFTELLNAGFIDTFRFFYPDKTGAYT 199 Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 IDYF + + L+ S + SDHCP+ + Sbjct: 200 WWSYMFNARARNAGWRIDYFCVSEELKDRLVSASIHD-----------DVMGSDHCPVEL 248 Query: 301 DY 302 Sbjct: 249 QI 250 >gi|239995602|ref|ZP_04716126.1| Endonuclease/exonuclease/phosphatase [Alteromonas macleodii ATCC 27126] Length = 232 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 39/278 (14%), Positives = 89/278 (32%), Gaps = 52/278 (18%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 +++NI++ ++ DY + Q+ N AD+V LQEM + + + + Sbjct: 1 MTYNIHSGIGRDK-----------KHDYKRIGQFLANSGADVVLLQEMDTRPS-ERSTAQ 48 Query: 87 NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146 + I + S +D A+ + + + + S + R Sbjct: 49 DVKDICAENTFKLIPSPAIRESDGWYGNAILTRFDVLAHDTLDV-----SQNGRQPRNVQ 103 Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT-QKKESLVPF 205 + ++ + V++ H Q L + ++ + KE +P Sbjct: 104 IVELKTEKTPLTVVNTHKGLKKL-------------ERRSQFSLLHEHLSLKMKEKQIPL 150 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 V+AGDFN + + + + +D + + Sbjct: 151 VLAGDFNEWQFFSKAFKALNELLLQQKVGA-----------TFPSHFPVFALDRVWVSDD 199 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ ++ + LSDH P+ +D + Sbjct: 200 IKVKACRK----------LKNAKTRILSDHLPVLVDIE 227 >gi|156972461|ref|YP_001443368.1| nuclease [Vibrio harveyi ATCC BAA-1116] gi|156524055|gb|ABU69141.1| hypothetical protein VIBHAR_00081 [Vibrio harveyi ATCC BAA-1116] Length = 982 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 45/382 (11%), Positives = 94/382 (24%), Gaps = 96/382 (25%) Query: 16 CTASVAQKVRLVSWNINTLSEQ--EGVSLWKNSVKRTTSDYT-------LLRQYAKNLDA 66 A +R+ S+N+ + R ++ + +DA Sbjct: 467 APAIADSDLRIASFNVLNYFNSVADSGHENPTGQNRGATNLDEFLIQQAKIVAAMNKMDA 526 Query: 67 DIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIHT 112 DI+ L E+ + +AV + ++ + ++ + ++ I Sbjct: 527 DIIGLMEVENNGFGDSSAVKNLVDALNAEIEDTEDHYTYVEIADQDKYQDEYFGSDAIMV 586 Query: 113 AIAVRKK--------NVRVLQQSYPLLGAKDSFSRAGNRRAVE----------LLVEING 154 AI R V V + + A A + V+ G Sbjct: 587 AILYRANEVTPKEAAKVIVTPEQHIEENTITRGDDAEGNPAYDKYQRHSLLQTFTVKETG 646 Query: 155 KKIWVLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 K + V+ H KS + + A + D + + Sbjct: 647 KDLSVVVNHFKSKGSECIEEWIAGVEDSEPADLQGNCNNFRVSAANVVGDALKGIEGD-- 704 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPN-------------DSLI 235 ++ GD N + TI Sbjct: 705 -VLVMGDLNAYGMEDPLLTLTDYSKEKYGRDIYTAAYTTIGGGELQVEKTKIEKGYGYHN 763 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 + + +D+ + + + ++ I E ++ + Sbjct: 764 LNTVLHGADTFSYTYSGELGNLDHALASNSLAQKVVAIEDWHINSLESNLFEYSSKYTGD 823 Query: 292 ---------LSDHCPISIDYDF 304 SDH P+ I DF Sbjct: 824 MPKYKDAFSASDHDPVIIAIDF 845 >gi|75760558|ref|ZP_00740592.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218900223|ref|YP_002448634.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus G9842] gi|228903576|ref|ZP_04067697.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 4222] gi|228968193|ref|ZP_04129193.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar sotto str. T04001] gi|74491954|gb|EAO55136.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218541450|gb|ACK93844.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus G9842] gi|228791496|gb|EEM39098.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar sotto str. T04001] gi|228856005|gb|EEN00544.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 4222] Length = 352 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 46/327 (14%), Positives = 108/327 (33%), Gaps = 70/327 (21%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T + + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEINLKNMLSFLQNENSDFAL 109 Query: 71 LQEMG----------SYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAI 114 LQE+ + + K P + + + N + Sbjct: 110 LQEVDIKSLRSFDVNGHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYA-----EAGL 164 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLD 171 + K + + L G + R + R VE + +N GK + ++++HL + Sbjct: 165 STFSKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA----- 219 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 Y + QQ ++LK+++ + E+ ++ GD+N+ ++ +D + P Sbjct: 220 -----YDEGGKIRKQQVEYLKEYMNKHYENGDYVIMGGDWNQLVSNAQLSDPKFVKERPE 274 Query: 232 DSLIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESF 275 + D + ID F++ N ++ Sbjct: 275 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQG 332 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + SDH P+S + Sbjct: 333 KDLKFEN----------SDHNPVSAVF 349 >gi|182416804|ref|ZP_02948195.1| exodeoxyribonuclease III [Clostridium butyricum 5521] gi|237669009|ref|ZP_04528993.1| exodeoxyribonuclease III [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379266|gb|EDT76765.1| exodeoxyribonuclease III [Clostridium butyricum 5521] gi|237657357|gb|EEP54913.1| exodeoxyribonuclease III [Clostridium butyricum E4 str. BoNT E BL5262] Length = 254 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 79/303 (26%), Gaps = 78/303 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +L+SWN+N L Y +DADI +QE + Sbjct: 5 KLISWNVNGLRACVKKGF---------------LDYFNEMDADIFCVQETKLQEGQIDLE 49 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + + + + ++ AV K + + + D+ R Sbjct: 50 LEGYYDYW-----------NYAEKKGYSGTAVFTKEKPISVKMGLGIEEHDNEGR----- 93 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ + K ++++++ + + + + L+ P Sbjct: 94 ----VITLEYDKFFLVNVYTPNSQQKLARLEYRMSWEDVFRNYLKDLEK--------NKP 141 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GD N + + F Sbjct: 142 VILCGDLNVAHKEIDLKNPSSNRKNAGFSDEERSKMSELLNSGFTDTFRYFYPDIEGVYS 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF++ Q+ L + SDHCP+ + Sbjct: 202 WWSYRFNARANNAGWRIDYFIVSQSLNDKLEDAKIHTSI-----------EGSDHCPVEL 250 Query: 301 DYD 303 + + Sbjct: 251 EIN 253 >gi|77166097|ref|YP_344622.1| endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC 19707] gi|254435463|ref|ZP_05048970.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani AFC27] gi|76884411|gb|ABA59092.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC 19707] gi|207088574|gb|EDZ65846.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani AFC27] Length = 288 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 46/287 (16%), Positives = 80/287 (27%), Gaps = 56/287 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +RL+S+NI + R T + Q D DIV LQE S Sbjct: 19 LRLLSYNIQAGVITTRYHHYLTRSWKHILPDARRHQTLTSIAQVIS--DFDIVGLQEADS 76 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + +I + A+ + ++Y L G Sbjct: 77 GSLRTGFVNQAKLLAELCDFPYFHQQATRRFANIAQQSNALLSRIQPSYLRTYRLPGL-- 134 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R A+ + VL IHL +QQ D+I Sbjct: 135 ----VPGRGAILAHFGNPKNPLIVLLIHLALG-------------RRSRTQQL----DFI 173 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + + V+ GD N +++ KT + R K Sbjct: 174 SSLVHNHPYVVVMGDLNCQLHSPELRALLRKTGLKAPVTKIAT---------YPSWRPKR 224 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ ++ + + +SDH P++ + Sbjct: 225 HIDHILVSPSLEVIQVGALAH--------------AVSDHLPLATEI 257 >gi|116625780|ref|YP_827936.1| exodeoxyribonuclease III [Candidatus Solibacter usitatus Ellin6076] gi|116228942|gb|ABJ87651.1| Exodeoxyribonuclease III [Candidatus Solibacter usitatus Ellin6076] Length = 258 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 90/303 (29%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN ++ L + D+V LQE+ A + Sbjct: 1 MKIATFNINNIN----------------KRLNNLTAWLSRAQPDVVCLQEL---KAEQRA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP S R + + +A+ + + P+L + Sbjct: 42 FPA-------SALRDLGYDGFWLGERSWNGVAIFAR------ECTPVLTRSSLPGNPKDS 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +A + +NG + + ++L + + Y + Q L + + ++ V Sbjct: 89 QARYIEAAVNG--VLIASLYLPNGNPQPGPKFDYKLA------WFQRLIEHGQELMKAGV 140 Query: 204 PFVIAGDFNRKINYLGNN----------------DDFWKTIDPNDSLIRFPKEKDSRCNA 247 P V+AGD+N + + + + + + Sbjct: 141 PVVLAGDYNVVPTAQDIYPTRSLDKNALIQPQSRQAYARLLAQGWTDALRTLQPEGPLWT 200 Query: 248 NKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + +D+F++ L+ D + SDH P I Sbjct: 201 FWDYERGRWPLGKGMRLDHFLLSPTVSDRLVDGGV-------DRWVRGEENASDHAPAWI 253 Query: 301 DYD 303 D Sbjct: 254 VLD 256 >gi|319407432|emb|CBI81083.1| exodeoxyribonuclease III [Bartonella sp. 1-1C] Length = 260 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 45/302 (14%), Positives = 86/302 (28%), Gaps = 66/302 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNI + + L ++ + DI LQE+ S + Sbjct: 1 MKIATWNIAG----------------IKARHETLCKWLEQNQPDIACLQEIKSVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 T + + +A+ K V +L + R Sbjct: 41 ------NFPRDTIENLGYHIETHGQKSFNGVAILSKKVPDEV----ILRLPGDNNDKQAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + N I V ++L + ++S + Y + L Sbjct: 91 Y-IETVYSTNIGSIRVASLYLPNGNPINSEKYLYKIE------WMKRLYTHAKSLLAYEE 143 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++AGD+N L ++ I D+ + Sbjct: 144 PLILAGDYNVIPTPLDAKNPQEWSNDALFLPQIRQIFQCITHLGFYDAIRNVTDAPSFSF 203 Query: 249 KNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + N I ID+ ++ A L I ++ SDH PI I+ Sbjct: 204 WDFQANAWKKNNGIRIDHLLLSPEAADQL-------ICAYSQTEVRGYQKPSDHVPIWIE 256 Query: 302 YD 303 + Sbjct: 257 LN 258 >gi|288927024|ref|ZP_06420917.1| exodeoxyribonuclease III [Prevotella buccae D17] gi|288336198|gb|EFC74586.1| exodeoxyribonuclease III [Prevotella buccae D17] Length = 249 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 80/302 (26%), Gaps = 77/302 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R +SWN+N L ++ K LDAD LQE Sbjct: 1 MRFISWNVNGLRACVSKGFEES---------------FKALDADFFCLQETKMQEG-QLN 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K+ + + D R Sbjct: 45 LQFEGYDSYWNYAEKKGY----------SGTAIYTKHKPLNVTYGLGIEEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + +I Q ++ Sbjct: 91 -----VITLEMEDFYLITVYTPN-------SQDELRRLDYRMTWEDDFLKYI-QGLDAKK 137 Query: 204 PFVIAGDFNRKINYLGNNDDFWK--------------TIDPNDSLIRFPKEKDSRCNANK 249 P ++ GD N + + TI N + K Sbjct: 138 PVIVCGDLNVAHEEIDLKNPKTNRRNAGFTDEEREKMTITLNSGFTDSFRYKYPEQVTYS 197 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF++ L+ +Y SDHCP+ + Sbjct: 198 WWSYRFHAREKNAGWRIDYFLISNRLRDRLVDAKIHTEVY-----------GSDHCPVEL 246 Query: 301 DY 302 D Sbjct: 247 DL 248 >gi|269961414|ref|ZP_06175778.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833791|gb|EEZ87886.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 982 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 45/382 (11%), Positives = 94/382 (24%), Gaps = 96/382 (25%) Query: 16 CTASVAQKVRLVSWNINTLSEQ--EGVSLWKNSVKRTTSDYT-------LLRQYAKNLDA 66 A +R+ S+N+ + R ++ + +DA Sbjct: 467 APAIADSDLRIASFNVLNYFNSVADSGHENPTGQNRGATNLDEFLIQQAKIVAAMNKMDA 526 Query: 67 DIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIHT 112 DI+ L E+ + +AV + ++ + ++ + ++ I Sbjct: 527 DIIGLMEVENNGFGDSSAVKNLVDALNAEIEDAEDHYAYVEIADQDKYQDEYFGSDAIMV 586 Query: 113 AIAVRKK--------NVRVLQQSYPLLGAKDSFSRAGNRRAVE----------LLVEING 154 AI R V V + + A A + V+ G Sbjct: 587 AILYRANEVTPKEAAKVIVTPEQHIEENTITRGDDAEGNPAYDKYQRHSLLQTFTVKETG 646 Query: 155 KKIWVLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 K + V+ H KS + + A + D + + Sbjct: 647 KDLSVVVNHFKSKGSECIEEWIAGVEDSEPADLQGNCNNFRVSAANVVGDALKGIEGD-- 704 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPN-------------DSLI 235 ++ GD N + TI Sbjct: 705 -VLVMGDLNAYGMEDPLLTLTDYSKEKYGRDIYTAAYTTIGGGELQVEKTKIEKGYGYHN 763 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 + + +D+ + + + ++ I E ++ + Sbjct: 764 LNTVLHGADTFSYTYSGELGNLDHALASNSLAQKVVAIEDWHINSLESNLFEYSSKYTGD 823 Query: 292 ---------LSDHCPISIDYDF 304 SDH P+ I DF Sbjct: 824 MPKYKDAFSASDHDPVIIAIDF 845 >gi|50955808|ref|YP_063096.1| exodeoxyribonuclease III [Leifsonia xyli subsp. xyli str. CTCB07] gi|50952290|gb|AAT89991.1| exodeoxyribonuclease III [Leifsonia xyli subsp. xyli str. CTCB07] Length = 280 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 29/304 (9%), Positives = 72/304 (23%), Gaps = 64/304 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + + D D + +QE+ Sbjct: 1 MRVATWNVN----------------SIRTRVARVVDWMVREDVDALAMQEIKCK------ 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y + + +A+ + + G Sbjct: 39 ----PEQFPYEAFEKAGYEVVLHGLNQWNGVAIASRLPIDEAEIGFPDMPGFLKGHDGPG 94 Query: 144 RAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 E + + + + +++ + LD TY L Sbjct: 95 LPTEARAIGATVEGVRLWSLYVPNGRALDDPHYTYKLD------WLAALLTNARSWLAED 148 Query: 203 V--PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 P + GD+N + + + + Sbjct: 149 PELPLALMGDWNVAPLDSDVGDPSLIPGVSTHISPPERAAFAAFEQAGLIDVVRPIVPEG 208 Query: 245 CNANKNLRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + ID+ + + ++ S + +G SDH P+ Sbjct: 209 YTYWDYKQLRFPRNEGMRIDFVLGSRAFADRVVDASIH-------RAERKGDAPSDHVPV 261 Query: 299 SIDY 302 ++ Sbjct: 262 LVEL 265 >gi|94311051|ref|YP_584261.1| endonuclease/exonuclease/phosphatase [Cupriavidus metallidurans CH34] gi|93354903|gb|ABF08992.1| Metal-dependent hydrolase [Cupriavidus metallidurans CH34] Length = 284 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 82/306 (26%), Gaps = 57/306 (18%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEMGS-------- 76 L+SWNI +G D + + + DAD++ LQE+ Sbjct: 3 LISWNIQWGRGADG-----------KVDLARIVDTLRGMADADVLCLQEITRGFSDLAGH 51 Query: 77 ---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + ++ H + + + + L Sbjct: 52 PGPDQVAELSALLPDYQVIFAPGVDRTHR---DGSPRQFGNVIATRLPVREIFRHALPWP 108 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 D + R A+E+ V+ + + ++ HL+ + S + + QA Sbjct: 109 ADPDVASMPRVALEVTVQAGSRLLRIICTHLEYYS--TSQRAAQTEALRDWHVQACDHAR 166 Query: 194 WITQKKESLVPF---------VIAGDFNRKINYLGNNDDF--WKTIDPNDSLIRFPKEKD 242 + + PF ++ GDFN + + + P+ Sbjct: 167 HPGRSENRPGPFTPEPRPSEAILCGDFNSRPEDGAYLRMVETFGGVTPDWHDAWIHMHPG 226 Query: 243 SRCNANK-------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 D+ + + + + ++ SDH Sbjct: 227 QPHAPTCALFDKEQWPEPPFACDFVFVTDDLLGNVRRCEVNDRT-----------DASDH 275 Query: 296 CPISID 301 PI + Sbjct: 276 QPIHLT 281 >gi|257426156|ref|ZP_05602572.1| beta-hemplysin [Staphylococcus aureus subsp. aureus 55/2053] gi|257428816|ref|ZP_05605211.1| beta-hemplysin [Staphylococcus aureus subsp. aureus 65-1322] gi|257431427|ref|ZP_05607801.1| beta-hemplysin [Staphylococcus aureus subsp. aureus 68-397] gi|257434138|ref|ZP_05610489.1| beta-hemplysin [Staphylococcus aureus subsp. aureus E1410] gi|257437049|ref|ZP_05613090.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus M876] gi|282914863|ref|ZP_06322644.1| phospholipase C [Staphylococcus aureus subsp. aureus M899] gi|282919849|ref|ZP_06327581.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus C427] gi|282925360|ref|ZP_06333016.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus C101] gi|293507877|ref|ZP_06667719.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus 58-424] gi|293510849|ref|ZP_06669549.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus M809] gi|293545449|ref|ZP_06672125.1| phospholipase C [Staphylococcus aureus subsp. aureus M1015] gi|257271064|gb|EEV03233.1| beta-hemplysin [Staphylococcus aureus subsp. aureus 55/2053] gi|257274460|gb|EEV05972.1| beta-hemplysin [Staphylococcus aureus subsp. aureus 65-1322] gi|257277873|gb|EEV08537.1| beta-hemplysin [Staphylococcus aureus subsp. aureus 68-397] gi|257281064|gb|EEV11208.1| beta-hemplysin [Staphylococcus aureus subsp. aureus E1410] gi|257283643|gb|EEV13769.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus M876] gi|282312994|gb|EFB43394.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus C101] gi|282316487|gb|EFB46864.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus C427] gi|282321257|gb|EFB51587.1| phospholipase C [Staphylococcus aureus subsp. aureus M899] gi|290919760|gb|EFD96832.1| phospholipase C [Staphylococcus aureus subsp. aureus M1015] gi|291094940|gb|EFE25208.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus 58-424] gi|291466321|gb|EFF08847.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus M809] Length = 274 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 82/278 (29%), Gaps = 28/278 (10%) Query: 43 WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE------ 96 + N + +D Y K + D+V E A K+ Y T Sbjct: 2 YPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQ 59 Query: 97 --RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 S +A+ K + + F N+ V +E NG Sbjct: 60 SGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNG 118 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNR 213 K + V+ H +S DS + ++Q + + D++ + I GD N Sbjct: 119 KNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNV 174 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK 268 D K ++ ND L N +DY D++ + Sbjct: 175 N-KGTEEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQ 233 Query: 269 --FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300 L+ E +E D + SDH PI Sbjct: 234 PKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 271 >gi|228961316|ref|ZP_04122933.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228798369|gb|EEM45365.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 352 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 108/324 (33%), Gaps = 64/324 (19%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T ++ + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLAFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117 LQE+ + + F N S + + ++ Sbjct: 110 LQEVDIKSL--RSFDINEHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTF 167 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLE 174 K + + L G + R + R VE + +N GK + ++++HL + Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA-------- 219 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 Y + QQ ++LK+++ + E+ ++ GD+N+ ++ +D + P + Sbjct: 220 --YDEGGKIRKQQVEYLKEYMNKHYENGDYVIMGGDWNQLVSNAQLSDPKFVKERPEWLV 277 Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278 D + ID F++ N ++ ++ Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 335 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P+S + Sbjct: 336 KFEN----------SDHNPVSAVF 349 >gi|224045591|ref|XP_002197268.1| PREDICTED: similar to Endonuclease/exonuclease/phosphatase family domain-containing protein 1 [Taeniopygia guttata] Length = 790 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 35/296 (11%), Positives = 78/296 (26%), Gaps = 37/296 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 R+ +WN+ + S + N R TLL K ++ +QE+ A+ K Sbjct: 484 FRVATWNLQSCS----IEKANNPGVREVVCMTLLENSIK-----LLAVQELADREALEKF 534 Query: 84 FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKKNVR-VLQQSYPL 130 + + + ++ + S Sbjct: 535 CMELNQPTLPNIRKWKGPRGCWKGVVSEKPSGQLHKGVEYSGFLWDTTAGIELKDASSQE 594 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + R ++ + V+++HL S Sbjct: 595 TAQTNGNGRHSYPHPYLAHFKVGMNDLTVVNLHLALPPSAGENTGKNHDSHK-----LAA 649 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + + + +I GDFN+ + ++ + P + + KN Sbjct: 650 CAQSLQETLKGEKDVIILGDFNQAPDSSDHD-----ILRKEKFHHLVPSSTFTNI-STKN 703 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302 + +D + ++ K I S+HCP+ ++ Sbjct: 704 PQGSKSLDNIWISRSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEF 759 >gi|254303301|ref|ZP_04970659.1| possible endodeoxyribonuclease [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323493|gb|EDK88743.1| possible endodeoxyribonuclease [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 279 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 99/307 (32%), Gaps = 38/307 (12%) Query: 1 MIR-KYVLALVFFLVP--CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 M + K++L+++F L + S A + + S+NI L D Sbjct: 1 MKKGKFLLSVIFALFFGLSSISSADEAYIASFNILRLGA-------------VKKDIPQT 47 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAV 116 + + DIV L E+ + + V ++ + + I+ S+ + A Sbjct: 48 AKLLQGF--DIVGLVEVINRDGVEELVDELNKQGNEKWDYHISPFGVGSSKYKEYFAYVY 105 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 +K V+ ++ K S R +I ++ +H Sbjct: 106 KKDKVKFIKSEGFYKDGKSSL----LREPYGATFKIGNFDFTLVLVHTIYG--------N 153 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + + + D+ K ++ IAGDFN + +K D I Sbjct: 154 NEAQRKAENFKMVDVYDYFQDKDKNENDIFIAGDFNL-YALDESFRPLYKHADKITYAID 212 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + N D F Q + S + ++ D+ K + +SDH Sbjct: 213 PAIKTTIGTKGRANSY-----DNFFFSQKYSQEFTGSS-GALDFSGDNPKLMREIISDHI 266 Query: 297 PISIDYD 303 P+ I + Sbjct: 267 PVFIVVE 273 >gi|329769257|ref|ZP_08260674.1| exodeoxyribonuclease [Gemella sanguinis M325] gi|328839251|gb|EGF88834.1| exodeoxyribonuclease [Gemella sanguinis M325] Length = 254 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 85/304 (27%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +S+N+N L G + ++ K LDAD LQE A Sbjct: 1 MKCISFNVNGLRAIVGKNFEED---------------FKKLDADFFCLQETK-MQAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ + ++ A+ K + + D+ R Sbjct: 45 LQFDGYYSYFN----------YAERKGYSGTAIYTKYKPLNVTYGIGIEEHDTEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + + ++ + + KD++ Sbjct: 91 -----VITLEYDNFFFITVYTPN-------SGSELKRLEYRMSWEDDFKDYLLT-LNKDK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N + + + + F A Sbjct: 138 GVIVCGDLNVAHTEIDLKNPKTNVKNAGFTPEEREKFTKLLDAGFIDTFRYFNPDLTGAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ ++ K+L+ ++ SDHCP+ Sbjct: 198 SWWSYRFNARKNNSGWRIDYFLVSKDLKKYLVSAKIHNDIF-----------GSDHCPVE 246 Query: 300 IDYD 303 + D Sbjct: 247 LVLD 250 >gi|254718052|ref|ZP_05179863.1| exodeoxyribonuclease III [Brucella sp. 83/13] gi|265982999|ref|ZP_06095734.1| exodeoxyribonuclease III Xth [Brucella sp. 83/13] gi|306837613|ref|ZP_07470484.1| exodeoxyribonuclease III (xth) [Brucella sp. NF 2653] gi|264661591|gb|EEZ31852.1| exodeoxyribonuclease III Xth [Brucella sp. 83/13] gi|306407320|gb|EFM63528.1| exodeoxyribonuclease III (xth) [Brucella sp. NF 2653] Length = 268 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 35/308 (11%), Positives = 80/308 (25%), Gaps = 72/308 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 + +WNIN +L+ Q+ ++ D++ LQE A Sbjct: 3 FSIATWNIN----------------SVRLRMSLVEQFLRDYQPDVLCLQETKCPDDQFPA 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K F + S + +A + + D Sbjct: 47 KGFRALGYEHIA-----------ISGQKGYHGVATVSRRPLDGVEKVDFCNMGDCRH--- 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +VE +K+ + + ++ + D + +P + + ++ I +K+ Sbjct: 93 ----LSAVVETGDRKLRIHNFYVPAG--GDEPDPAINPKFAHKLAFLEEMRAIIADRKD- 145 Query: 202 LVPFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRC 245 ++ GD N N + ++ K + + Sbjct: 146 GCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRIKGGWSDLMRHLIAADQ 205 Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ + + R SDH Sbjct: 206 KIFTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG-------LQVLRDARGWDRPSDH 258 Query: 296 CPISIDYD 303 P+ +D Sbjct: 259 VPVIATFD 266 >gi|160878851|ref|YP_001557819.1| endonuclease/exonuclease/phosphatase [Clostridium phytofermentans ISDg] gi|160427517|gb|ABX41080.1| Endonuclease/exonuclease/phosphatase [Clostridium phytofermentans ISDg] Length = 258 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 41/280 (14%), Positives = 83/280 (29%), Gaps = 24/280 (8%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V++NI Q+G + + L+ Q K +ADIV QE + Sbjct: 1 MKVVTFNIRCDYNQDGNNNF-------QYRKELILQKLKKENADIVCFQEALPHVVKWLK 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + I ++++ + N L + + G + R Sbjct: 54 ENLEDYYILSCGREKDLKGEQNTVAFKKEKYQLISMNTFWLSLTPDVPGTRYENQSMCPR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 E+ ++ + +L + + + + + Q V Sbjct: 114 SVTEVFLQDLETE---KLYYLLNTHLDHEGSEARVLGMQQILKHMSGVAEQKKQAGFGKV 170 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 ++ GDFN N I ++ L + + ++ IDY V+ Sbjct: 171 EMILTGDFNGYPNSEEI-----SLIAKSEFLRDLTSGMEGTFHDFGRMQPAEKIDYIVVS 225 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 G LSDH P+S+ + Sbjct: 226 SGL---------KCCTRELWTDCENGVFLSDHYPVSVVLE 256 >gi|93006020|ref|YP_580457.1| exonuclease III [Psychrobacter cryohalolentis K5] gi|92393698|gb|ABE74973.1| Exodeoxyribonuclease III [Psychrobacter cryohalolentis K5] Length = 274 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 80/311 (25%), Gaps = 75/311 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 R V +NIN + + +R D D++ LQE ++ Sbjct: 3 RFVCFNINGIRAR-------------QHQLEAVRDII---DPDVMGLQETKVHDE----- 41 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + + H +A+ K + Q G + A R Sbjct: 42 -----QFPLENVEGLGYHVEYFGQKAHYGVALLSKVAPIFVQK----GFPNEDEEAQKRF 92 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + E +G++I VL+ F + + L +I K Sbjct: 93 -IHARYEFDGREIDVLN-----GYFPQGESQDHPTKFPMKRAYYADLMAYIDTLKAEGRS 146 Query: 205 FVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 VI GD N ++L +++ + + + Sbjct: 147 LVIMGDMNIAPEDIDIGIGEVNAKRWLKNRKTSFLPEEREWYSNLMSRELTDTYRLHYPE 206 Query: 244 RCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + ID+ + + + + ++ Sbjct: 207 STELYSWFDYRSRGFDDDPKRGLRIDHILCTPDLVECCVDAGI-------SYELRAMEKP 259 Query: 293 SDHCPISIDYD 303 SDH PI +D Sbjct: 260 SDHAPIWTAFD 270 >gi|260428642|ref|ZP_05782621.1| endonuclease/exonuclease/phosphatase family protein [Citreicella sp. SE45] gi|260423134|gb|EEX16385.1| endonuclease/exonuclease/phosphatase family protein [Citreicella sp. SE45] Length = 341 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 94/340 (27%), Gaps = 62/340 (18%) Query: 24 VRLVSWNINTLSE--QEGVSLWKNSVKRTTSDY------TLLRQYAKNLDADIVFLQEMG 75 +RL ++NI + L + D L +DAD V + E Sbjct: 1 MRLATYNIEWFDALFDDSGRLLADGGWSGRHDITRRDQAEALGIVFTAMDADAVMIIEAP 60 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + R N IA+ + + PL Sbjct: 61 DTGSRRSTVRALEAFAETYELRTRRVLTGFVNETQQE-IALLYDPAFLSARHAPLGQVTG 119 Query: 136 SFSRAGNRRAVELLVEIN---------------------GKKIWVLDIHLKSFCFLDSLE 174 S + ++I+ G + ++ HLKS + Sbjct: 120 SHGSPRFDGVFRIDLDIDATEDRVVFSKPPLEIEAVTATGHVLRLIGAHLKSKAPHGAHN 179 Query: 175 NTY-----SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-------- 221 + QA WL+ + ++ ++ GD N Sbjct: 180 RDQVMRLGIANRRKQLAQAIWLRRRVETHLQAGESVIVMGDLNDGPGLDEYEHLFGRSSV 239 Query: 222 ---------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-----IDYFVMDQNAY 267 D+ + DP+ + + A L+++ +DY ++ + Sbjct: 240 EIVLGEGVVDEAMRLHDPHAAQALCNRLGPQPTTARFFLKSQGRYLQAMLDYIMVSADLA 299 Query: 268 K----FLIQESFSE-ILYNEDDIKSRGKRLSDHCPISIDY 302 + I F + + + +++ SDH P++ID Sbjct: 300 ATRPHWRIWHPFDDPVCWRTPELREALLTASDHFPVTIDL 339 >gi|163859167|ref|YP_001633465.1| hypothetical protein Bpet4846 [Bordetella petrii DSM 12804] gi|163262895|emb|CAP45198.1| conserved hypothetical protein [Bordetella petrii] Length = 286 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 47/322 (14%), Positives = 87/322 (27%), Gaps = 83/322 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+VS+NI+ S LR L D+VFLQE+ N Sbjct: 4 IRVVSYNIH----------KGRSSLGRRESLNDLRLGLYGLRPDLVFLQEVQGRNEHISF 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + N A+ + V + S R R Sbjct: 54 LDAQHESLAAALRLDVAYGCNAIRNRSDHGNALLSRYAIVEHE-----NQDISDHRLEQR 108 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++++G+ + +HL F ++Q Q L D I++ Sbjct: 109 GLLHARIQVDGRDVHCFVVHLGLFAGS-------------RTRQIQALTDRISRLVPEGD 155 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-------------------- 243 P ++AGDFN + L F + + + P+ Sbjct: 156 PILVAGDFNDWGDRLAP--LFVQQLGLYEVFANAPRSHGGELPRLRDSVRRLSNVLRGVP 213 Query: 244 ----------------------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + +D + S + Sbjct: 214 NSVAVLERNNQLGMGGAYCPLPPPRTFPAVFPWFRLDRIY-----QRGFAVRSARVLR-- 266 Query: 282 EDDIKSRGKRLSDHCPISIDYD 303 +LSDH P+ + + Sbjct: 267 ----GREWAKLSDHAPLLAELE 284 >gi|115488172|ref|NP_001066573.1| Os12g0279600 [Oryza sativa Japonica Group] gi|77554323|gb|ABA97119.1| exodeoxyribonuclease III family protein, expressed [Oryza sativa Japonica Group] gi|113649080|dbj|BAF29592.1| Os12g0279600 [Oryza sativa Japonica Group] gi|215687325|dbj|BAG91875.1| unnamed protein product [Oryza sativa Japonica Group] gi|222616909|gb|EEE53041.1| hypothetical protein OsJ_35763 [Oryza sativa Japonica Group] Length = 379 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 95/347 (27%), Gaps = 88/347 (25%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + R V+WN N+L + R SD+ Q+ +D D++ +QE+ Sbjct: 51 PPAPREEEPRRFVTWNANSL------------LLRMKSDWPAFCQFVSRVDPDVICVQEV 98 Query: 75 GSYNAVAKVFPKNT-----------------WCIFYSTERLINHSKRDSNNDIHTAIAVR 117 A +K PKN S ++ + A+ Sbjct: 99 RMPAAGSKGAPKNPGQLKDDTSSSRDEKQVVLRALSSPPFKDYRVWWSLSDSKYAGTAMI 158 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 K ++ L S R ++ + +L+ + + + Sbjct: 159 IKKKFEPKKVSFNLDRTSSKHEPDGR-----VIIAEFESFLLLNTYAPN-----NGWKEE 208 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG------------------ 219 S + + + +++ Q P + GD N + Sbjct: 209 ENSFQRRRKWDKRMLEFVQQV---DKPLIWCGDLNVSHEEIDVSHPDFFSSAKLNGYIPP 265 Query: 220 -------------NNDDFWKTIDPNDSLIRFPKEK----------DSRCNANKNLRNKIP 256 F + + + S K ++ Sbjct: 266 NKEDCGQPGFTLSERRRFGNILSQGKLVDAYRYLHKEKDMDCGFSWSGHPIGKYRGKRMR 325 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDYF++ + ++ + G SDHCP+S++ Sbjct: 326 IDYFLVSEKLKDQIVSCDIHGRGIELE-----GFYGSDHCPVSLELS 367 >gi|187476631|ref|YP_784654.1| endonuclease/exonuclease/phosphatase family protein [Bordetella avium 197N] gi|115421217|emb|CAJ47722.1| putative endonuclease/exonuclease/phosphatase family protein [Bordetella avium 197N] Length = 286 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 86/320 (26%), Gaps = 79/320 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+VS+NI+ S LR L D+VFLQE+ N + Sbjct: 4 IRVVSYNIH----------KGRSSLGRHESLNDLRLGLYGLRPDLVFLQEVQGRNETTSM 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + A+ + V + S R R Sbjct: 54 LHAQHESLAAALRLNVAYGCNAVRAATDHGNALLSRYDIVDH-----VNQDISDHRLEQR 108 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +++ G ++ L +HL F S +Q Q L + I + Sbjct: 109 GLLHARIDVGGTEVHCLVVHLGLF-------------ASSRQRQIQALTERIRAEVPDGA 155 Query: 204 PFVIAGDFNRKIN-------------------------YLGNNDDFWKTIDP-------- 230 P +IAGDFN + L D + + Sbjct: 156 PLIIAGDFNDWGDKLAPQFVQQLGLYEVFSHAPRTSGGELPRLRDSLRRLTAALRGVPGN 215 Query: 231 -------NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 N + + +D + S + Sbjct: 216 TVVLERGNQLGMDGTYCPLPPPRTFPAVFPWFRLDRIY-----QRGFAVRSARVLR---- 266 Query: 284 DIKSRGKRLSDHCPISIDYD 303 + +LSDH P+ + + Sbjct: 267 --GRQWAKLSDHAPLLTELE 284 >gi|110637356|ref|YP_677563.1| hypothetical protein CHU_0946 [Cytophaga hutchinsonii ATCC 33406] gi|110280037|gb|ABG58223.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406] Length = 342 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 38/350 (10%), Positives = 92/350 (26%), Gaps = 61/350 (17%) Query: 1 MIRKYVLALVFFLVPCTA------------SVAQKVRLVSWNINTLSEQEGVSLWKN--- 45 M +L L+ + + A R+ +N L + + Sbjct: 4 MNISAILLFFVSLLSFSCSYRTETVNKSAKTAATTCRIGFYNTENLFDIYDDKHSNDNDF 63 Query: 46 --------SVKRTTSDYTLLRQYAKNLDADI-----VFLQEMGSYNAVAKVFPKNTWCIF 92 + R +++ L+ D+ + + E+ + + + + Sbjct: 64 LPLGKLKWTADRYDVKLKHIKEVIDGLN-DLSTLALIGMSEVENKEVLEDLLKND----- 117 Query: 93 YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152 T I H I + L + R + + + Sbjct: 118 --TTFQIIHYNSSDRRGIDVCLLYNPAYFTPLTSYLSSFDKSN-DPELFLREVLVVKGVL 174 Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 + VL H S + T + ++L+Q+ + I + ++ GDFN Sbjct: 175 WNDTVHVLVNHWPSRREGEEKSETKRIAAAMLTQEI--IDSIIQVNPSNN--ILLMGDFN 230 Query: 213 RKINYLGNNDDFW----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 + + + K + + F +++ K + D ++ + Sbjct: 231 DQPSDKSMSVMLNLKTTKKGKDGELINPFKALQEAGEGTCKYKHDWFLFDQILISNSISN 290 Query: 269 F----------------LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + SDH P+ I+ Sbjct: 291 KKGFQFTDAEIYHPEWLYYKNDLKSGPFRSYLGNTYYGGYSDHFPVYIEL 340 >gi|320159473|ref|YP_004172697.1| hypothetical protein ANT_00630 [Anaerolinea thermophila UNI-1] gi|319993326|dbj|BAJ62097.1| hypothetical protein ANT_00630 [Anaerolinea thermophila UNI-1] Length = 264 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 46/289 (15%), Positives = 88/289 (30%), Gaps = 41/289 (14%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + LV++N+ T Q+G W ++ + ++LDAD++ LQE+ + Sbjct: 3 HPLTLVTFNLRTAEAQDGEFSW-------ARRRDMVVECLRDLDADLIGLQEVHDDSQAR 55 Query: 82 KV---FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 V FP+ W + + A V ++ L P + S+ Sbjct: 56 DVRSAFPEYEWIGVRRGGNGAAPLEMNVALVRRGAFEVLEQQFFWL-SRTPEVPGSISWG 114 Query: 139 RAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 A A+ L + NG + + HL + A+ L+ I Sbjct: 115 SAYVCTAIFLRLRSCRNGAEAAWFNTHLDYLP-------------QARLEGAKLLRRRIE 161 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWK-----TIDPNDSLIRFPKEKDSRCNANKNL 251 ++ GDFN + + + + +A L Sbjct: 162 A-LPPDCNVLVTGDFNAGKRSCVYRTLLGEGASCHRLRDAYRAVHTDGRGEGTFHAFGML 220 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ID+ ++ ++ + G SDH P+ Sbjct: 221 PRPQAIDWVLVSKDLP---------VEDAGVACVSVGGVYPSDHYPVWA 260 >gi|291457988|ref|ZP_06597378.1| exodeoxyribonuclease III [Oribacterium sp. oral taxon 078 str. F0262] gi|291419320|gb|EFE93039.1| exodeoxyribonuclease III [Oribacterium sp. oral taxon 078 str. F0262] Length = 272 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 83/302 (27%), Gaps = 78/302 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +L+SWN+N L G + + LDAD+ LQE A++ Sbjct: 4 KLISWNVNGLRAVLGKTFLSD---------------FHALDADVFCLQETKLQEGQAEL- 47 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + +++ + + A+ K + + D R Sbjct: 48 SLPDYHQYWNYAEKKGY----------SGTALFSKEEPLSVSYGIGIPEHDREGR----- 92 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ ++L +++ + S + +++I E P Sbjct: 93 ----VISAEFPDCYILTVYVPN-------SQNELQRLSYRMEWEDAFREYILS-LEEKKP 140 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + GD N + + + L F +A Sbjct: 141 VIYCGDLNVAHQEIDLKNPASNHHNAGFTDDERAKFSRLLDCGYLDSFRFLHPEERDAYS 200 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYFV+ + + + S SDHCP+ + Sbjct: 201 WWSYRTKARERNVGWRIDYFVVSEKLRERIRGASIH-----------PEIMGSDHCPVEL 249 Query: 301 DY 302 D Sbjct: 250 DL 251 >gi|149369492|ref|ZP_01889344.1| hypothetical protein SCB49_06692 [unidentified eubacterium SCB49] gi|149356919|gb|EDM45474.1| hypothetical protein SCB49_06692 [unidentified eubacterium SCB49] Length = 366 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 37/324 (11%), Positives = 73/324 (22%), Gaps = 58/324 (17%) Query: 25 RLVSWNINTLSEQ-------EGVSLWKNSVKRTT----SDYTLLRQYAKNLDADI----- 68 + +N+ L + + + T + + + + DI Sbjct: 46 TIAFYNVENLFDFEDDPITFDDDRTPEGKDHWTEEIYNAKLVNIAKVISEIGTDITGTTP 105 Query: 69 --VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 V L E + + + + I I A+ +K+ Sbjct: 106 AVVGLCETENRRVLEDLLN---QESLVQEDYGIVQFDSPDRRGIDVALLYKKRLFTPTNS 162 Query: 127 SYP---LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + D+ R R + + ++G+KI + H S + Sbjct: 163 KTHTLYIYDNVDNTKRVYTRDQLVVSGMLDGEKIHFIVNHWPSRSGGEERSRYKRNK--- 219 Query: 184 LSQQAQWLKDWITQKKESLVP---FVIAGDFNRKINYLGNNDDFWKTIDPND-----SLI 235 A L I S P + GDFN + + Sbjct: 220 ----AAALNRHIVDSLFSQDPYAKVITMGDFNDDPSNESIKKYLGAKKEKEGIQIKELYN 275 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK------FLIQESFSEILYNEDDIKSRG 289 + D ++ K L + Y + Sbjct: 276 PMESMHKKGIGTLAYRDHWNLFDQMIISTELTKDDYSSYRLYKAGIFNKNYLVNPRGRYK 335 Query: 290 KRL-------------SDHCPISI 300 SDH P+ + Sbjct: 336 DYPFRSFTGGSFTGGYSDHFPVYL 359 >gi|14861062|dbj|BAB62090.1| deoxyribonuclease I precursor [Bufo japonicus] Length = 353 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 34/299 (11%), Positives = 89/299 (29%), Gaps = 27/299 (9%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 ++ LV C +++ S+NI + + +LL Q + + Sbjct: 4 VILVALVACFLQAGFSLKIASFNIERFAVG---------KVDDPTVLSLLIQILRRYE-- 52 Query: 68 IVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 ++ +QE+ A+ ++ + LI+ S+ R+ ++ + Sbjct: 53 LIAVQEVMSKDNTAIIRLVQELNAATGLHYNLLISDHLGRSSYREKYVYIYREDILKPTE 112 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 + G ++ + R ++ + ++ Sbjct: 113 WYHYDDGCENCGTDVFIREPFVARFSSLTTELKDFALVSIHTSPDYAVREVDGLYDVWED 172 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + + L + +I GD+N +Y+ + + SL + + Sbjct: 173 AKQRLLLE----------DILILGDYNAGCSYVKTSHWPNIRLRQESSLQWLIGDTEDST 222 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302 + + V +I + Y+ + K +SDH P+ ++ Sbjct: 223 VSTNTHCPYDRL--VVGGARFQDTVIPGTAKAFNYHVAYDLTYEMAKAVSDHYPVEMEI 279 >gi|86136925|ref|ZP_01055503.1| exodeoxyribonuclease III, putative [Roseobacter sp. MED193] gi|85826249|gb|EAQ46446.1| exodeoxyribonuclease III, putative [Roseobacter sp. MED193] Length = 262 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 32/307 (10%), Positives = 77/307 (25%), Gaps = 75/307 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81 L +WNIN++ +EG+ +++ + D++ LQE S + Sbjct: 3 FTLATWNINSVRLREGL----------------VQKLMREEGPDVLCLQECKSPVDLIPT 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F K + + +A+ + + G + Sbjct: 47 EGFAKLGY-----------PYMVARGQKGYNGVAILSRLPIAEAGAEDFAGLGHARH--- 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +E + V + ++ + D + + ++DW Sbjct: 93 ----IAGRLENG---VTVHNFYVPAG--GDKPDREVNEKFGQKLDYLTEMRDWFKAAAPE 143 Query: 202 LVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD N D D + + Sbjct: 144 KS--ILVGDLNIAPREDDVWDHKKMLKIVSHTPVEVDLLAEVQDAGGWADVTRADIPEGL 201 Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ ++ + ++ SDH Sbjct: 202 LYSWWSYRAKDWDAADKGRRLDHVWATEDICQAAHSS-------RVLRAARGWEKPSDHA 254 Query: 297 PISIDYD 303 P+ +D Sbjct: 255 PVFATFD 261 >gi|71065757|ref|YP_264484.1| exonuclease III [Psychrobacter arcticus 273-4] gi|71038742|gb|AAZ19050.1| Exodeoxyribonuclease III [Psychrobacter arcticus 273-4] Length = 274 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 79/311 (25%), Gaps = 75/311 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 R V +NIN + + +R D D++ LQE ++ Sbjct: 3 RFVCFNINGIRAR-------------QHQLEAVRDII---DPDVMGLQETKVHDE----- 41 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + + H +A+ K + Q G + A R Sbjct: 42 -----QFPLENVEGLGYHVEYFGQKAHYGVAILSKVAPIFVQK----GFPGEDAEAQKRF 92 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + E +G++I VL+ F + + L +I K Sbjct: 93 -IHARYEFDGREIDVLN-----GYFPQGESQEHPTKFPMKRAYYADLMAYIDILKAEGRS 146 Query: 205 FVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 V+ GD N ++L +++ + + + Sbjct: 147 LVVMGDMNIAPEDIDIGIGEVNAKRWLKNRKTSFLPEEREWYSALMSRELTDTYRLHYPE 206 Query: 244 RCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + ID+ + + + ++ Sbjct: 207 STELYSWFDYRSRGFDDDPKRGLRIDHILCTPDLVAHCVDAGI-------SYELRAMEKP 259 Query: 293 SDHCPISIDYD 303 SDH PI +D Sbjct: 260 SDHAPIWTAFD 270 >gi|332991677|gb|AEF01732.1| Endonuclease/exonuclease/phosphatase [Alteromonas sp. SN2] Length = 242 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 39/279 (13%), Positives = 91/279 (32%), Gaps = 52/279 (18%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 R++S+NI++ ++ + +Y + Q+ ADIV LQEM + + + Sbjct: 3 RIISYNIHSGLGRDKL-----------QNYHRIGQFLAESGADIVLLQEMDTRPS-ERAI 50 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 ++ I + + A+ + + Q+++ + S R Sbjct: 51 ERDIEDICAKNVYNLVSAPALHEPSGWYGNAILSRFNVIEQETFDV-----SQQGRQPRN 105 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLV 203 ++++ + + V++ H Q L D++ Q + + Sbjct: 106 VQVVVLQTDKGPLTVVNTHKGLKRL-------------ERRSQFALLHDYLEQRMQAHPM 152 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 P V+AGDFN + K ++ + ++ +D + Sbjct: 153 PLVLAGDFNEWQFFSRAFTSLNKLLNQHK---------VGATFPSQFPIFS--LDRVWVS 201 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ++ + SDH P+ +D Sbjct: 202 DDITVSECKK----------LTSKKASVFSDHLPVQLDI 230 >gi|163786792|ref|ZP_02181240.1| hypothetical protein FBALC1_16442 [Flavobacteriales bacterium ALC-1] gi|159878652|gb|EDP72708.1| hypothetical protein FBALC1_16442 [Flavobacteriales bacterium ALC-1] Length = 316 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 48/322 (14%), Positives = 95/322 (29%), Gaps = 53/322 (16%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD---- 65 ++ + +NI L + E L + + KR + L + Sbjct: 5 SETYTIAFYNIENLFDIENDPLTNDDDFLPTSAKRWTPKRYQNKLMKLGTVISKIGEENT 64 Query: 66 ---ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 IV L E+ + V+ + H I A+ + + Sbjct: 65 EIAPVIVGLAEVENSKVVSDLVRSKN---LIDQAYSYIHYDSSDERGIDVALLYKSDVFK 121 Query: 123 VLQQSYPLLGAKDSFSRAG-NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN-TYSPS 180 V + +D + R + + E+ +K+ ++ H S + + Sbjct: 122 VENSETFSVYLQDELGKQDYTRDILLVQGELYNEKLNIIVNHWSSRREGEKETEFKRIAA 181 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + ++ + LK K+S ++ GDFN ND+ ++ L K Sbjct: 182 ANKVNSIIRTLKQ-----KKSSAKIIVMGDFNDNP-----NDNSLSLLEKESELYNPFKT 231 Query: 241 KDSRCNANKNLRNKIPI-DYFVMDQNAYKF----LIQESFSEI---------------LY 280 SR ++N + + D + N + L +S + Sbjct: 232 VWSREKGSQNYNFQWNLFDQILFSTNFFDANNSALDFDSADVFNSKFLTQYHGKYKGQPF 291 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 K SDH P+ I Sbjct: 292 RTYVGKKYKGGYSDHFPVYIRL 313 >gi|284047996|ref|YP_003398335.1| exodeoxyribonuclease III [Acidaminococcus fermentans DSM 20731] gi|283952217|gb|ADB47020.1| exodeoxyribonuclease III [Acidaminococcus fermentans DSM 20731] Length = 250 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 78/305 (25%), Gaps = 80/305 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L++WN+N L + ADIV +QE Sbjct: 1 MKLITWNVNGLRACMNKGF---------------ADFMTAAGADIVCVQETK-MQREQAS 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + ++++ + + AV K + G R Sbjct: 45 FDFPGYHEYWNSAVKKGY----------SGTAVFSKTEPLSVT----YGLGQEEHDQEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ ++++++ + + Q + + Sbjct: 91 -----VITAEYPDFYLVNVYTPNSQRGLTRLEYR--------MQWEDVFQDYCAGLARKK 137 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + ++ + + F + A Sbjct: 138 PVIVCGDLNVAAQPIDLKNPDSNHKNAGFTDEERAKFQQFLDHGFVDSFRSLYPDKEGAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ QN + + SDHCP+ Sbjct: 198 TWWSYMFKARERNAGWRIDYFLVSQNGKDRIQDVIIHNEV-----------MGSDHCPV- 245 Query: 300 IDYDF 304 + ++ Sbjct: 246 -ELEW 249 >gi|94310134|ref|YP_583344.1| exodeoxyribonuclease III [Cupriavidus metallidurans CH34] gi|93353986|gb|ABF08075.1| exodeoxyribonuclease III (xth) [Cupriavidus metallidurans CH34] Length = 265 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 36/308 (11%), Positives = 86/308 (27%), Gaps = 73/308 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-----DIVFLQEMGSYN 78 +R+ SWN+N+L + Q+ DA D + LQE+ Sbjct: 1 MRIASWNVNSL----------------KVRLPQVLQWLGAQDAAGTPIDALCLQELK--- 41 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 P + + + + + + +A+ + + + + Sbjct: 42 -----LPDDKYP--LAELQAAGFHSIFTGQKTYNGVAILAR------NAAMPVPTDVVRN 88 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 G A + ++ + ++ + + LDS + Y + + +W+ + Sbjct: 89 IPGYEDAQQRVIAGTYGDVRLISAYFPNGQALDSDKFVYKLD------WLKAMIEWLRAE 142 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRFP----------KEKDSR 244 + GDFN +D + P + + + Sbjct: 143 MTRYPKLALLGDFNIAPEDRDVHDPAKWEGQNLVSPQERDAFQTLIGLGLVDSFRMFEQP 202 Query: 245 CNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 ++ ID+ ++ + + D R ++ SDH Sbjct: 203 EKMFSWWDYRMMGFRRNAGLRIDHILLSADLARQCATCVI-------DKEPRRWEQPSDH 255 Query: 296 CPISIDYD 303 P+ Sbjct: 256 TPVVATLT 263 >gi|154174202|ref|YP_001408089.1| putative endonuclease/exonuclease/phosphatase [Campylobacter curvus 525.92] gi|112803131|gb|EAU00475.1| putative endonuclease/exonuclease/phosphatase [Campylobacter curvus 525.92] Length = 480 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 41/324 (12%), Positives = 100/324 (30%), Gaps = 62/324 (19%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSE--QEGVSLWKNSVKRTTSDYT---- 55 +R + L ++ + A ++ + ++N+ L + +G V ++ D Sbjct: 1 MRVFWLIVLSLVFSF----AGEISIATYNVENLFDCKNDGSEYADFRVGSSSWDCAAANE 56 Query: 56 ---LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 +++ +LD+DI+ L+E+ + + ++ + T + + I Sbjct: 57 KVSRIKEVILSLDSDIIALEEIENEEILKELAKGTQYKYVLFTAQKGAPIGLGLISKIR- 115 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 P+ A R +++ E+ GK + H ++ + Sbjct: 116 ----------------PVKSEIFKVPNAKTRNILKVNFELEGKNFSIFVNHFPAYKNGKA 159 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 + + E+ V+ GDFN I Sbjct: 160 EQQKAER--------------TLRAALENEKNAVLLGDFNTPYGS---RSLLNDIIRIRS 202 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK----FLIQESFSEILYNEDDIKSR 288 + + + ++ K ID+ ++ + ++ + ESF + +K Sbjct: 203 YVDLWGFLEAKERYSHAVYGRKSAIDHVLLSPSFFENGELSYVFESFEV--FKPAFMKDE 260 Query: 289 GKRL---------SDHCPISIDYD 303 + SDH P+ Sbjct: 261 NGYVRSQDGVNLYSDHFPLRFKIS 284 >gi|317124329|ref|YP_004098441.1| exodeoxyribonuclease III Xth [Intrasporangium calvum DSM 43043] gi|315588417|gb|ADU47714.1| exodeoxyribonuclease III Xth [Intrasporangium calvum DSM 43043] Length = 294 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 36/306 (11%), Positives = 75/306 (24%), Gaps = 68/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +R+++ N+N + + D++ LQE+ +AK Sbjct: 30 MRVITANVNGIRAAIRRGAAP---------------WISQAAPDVLCLQEVRAGETELAK 74 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + ++ R +AV + + ++ Sbjct: 75 ALAEAGLGHWHVAHTEGTVKGRA-------GVAVATREPHTAVRVGVEGAFAEAGRW--- 124 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 VE+ V + V ++ + + + + + ++ Sbjct: 125 ---VEVDVSTPAGVVTVASTYVHTGEAGTGRQVEKQL-------FLDAMTGRLERAAQAG 174 Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 V+ GD N D F + D + Sbjct: 175 ALMVVTGDLNVAHREDDLKNWKGNLRKSGFLPEERDYFDRWFDELAWVDVHRVLHGPGPG 234 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDY + + S +S R SDH P Sbjct: 235 PYTWWSWRGKAFDNDAGWRIDYQLASASLAPLARSASVG-------RAESYAARWSDHAP 287 Query: 298 ISIDYD 303 + +DYD Sbjct: 288 VIVDYD 293 >gi|150003751|ref|YP_001298495.1| hypothetical protein BVU_1182 [Bacteroides vulgatus ATCC 8482] gi|149932175|gb|ABR38873.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] Length = 247 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 83/309 (26%), Gaps = 71/309 (22%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K +L L L+ +A +RL+++NI + + V D+ + Sbjct: 1 MKKTLLLLFTLLLALSAQSQNSLRLMTYNIKNANGMDDVC-----------DFQRIADVI 49 Query: 62 KNLDADIVFLQEMGSYN-------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 ++ ++V LQE+ S + ++ + +++ + I Sbjct: 50 NHIHPEVVALQELDSMTHRSGQKYVLGEIAGRTQMHAYFAP--------AIDYDGGKYGI 101 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + K + V ++ L G R R + + + Sbjct: 102 GLLTKEIPVSLKTMTLPG------REEARALIMAEFDN-------YIYCCTHLSLTEEDR 148 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 L+ PF +AGD N + Sbjct: 149 -------------MASLELIKDFAAAHKKPFFLAGDLNAEPESAFIKYL----------Q 185 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 F D + IDY + K S + SD Sbjct: 186 QDFQILSDVNQHTFPAPAPTETIDYITALKQNMKGFTVTSAQVVNEPV---------ASD 236 Query: 295 HCPISIDYD 303 H P+ + + Sbjct: 237 HRPLVVVLE 245 >gi|58584986|ref|YP_198559.1| exonuclease III [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419302|gb|AAW71317.1| Exonuclease III [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 260 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 87/304 (28%), Gaps = 68/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N L + + DI+ LQE+ Sbjct: 2 LKIATWNVN----------------SIRKRVDQLCSFIVDDQIDIILLQEIKCTEE---- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y + + + V K+ + + ++ Sbjct: 42 ------QFPYVEIEKLGYECIVYGEVARNGVCVLSKHPILEKFKIDIVEGYQEARY---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E L++ N +K+ V+ I++ + L S Y + L + + ++ Sbjct: 92 --IECLIKHNNQKMRVVSIYVPNGQSLGSHVFEYK------LKFLDNLYERMDNLLKNEE 143 Query: 204 PFVIAGDFNRKINYLGNNDDFW------------KTIDP--NDSLIRFPKEKDSRCNANK 249 VIAGD+N + + D + + N + Sbjct: 144 LIVIAGDYNVAPDEIDVFDPTLLNGQVCFHIKEREKLKAILNLGFKDAFRMSHPNLQQFS 203 Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 R + ID+ ++ A L DD + + SDH PI Sbjct: 204 WWRYQGNSLRNNQGMRIDHMLLSPQAVDKLGICYI-------DDRLRKLENPSDHTPIVS 256 Query: 301 DYDF 304 ++ Sbjct: 257 IMEW 260 >gi|330876694|gb|EGH10843.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 261 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 85/287 (29%), Gaps = 51/287 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAV 80 + +++ N++ LR+ +++ ADIVFLQE+ + Sbjct: 19 SLNVLTMNMHMGFGIFNRRF----------ILPELREAVRSVSADIVFLQEVHGEHQSHA 68 Query: 81 AKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 +V T + S + + D A+ K + ++ + S Sbjct: 69 RRVKDWPTISQYEFLADSMWSDFAYGRNAVYPDGDHGNALLSKYPIIQHENLDV-----S 123 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R + ++E+ V + + S QQ + L + + Sbjct: 124 IHGTEQRGLLHCILEVPHAG-RVHAVCVHLGLR-----------ESHRRQQLKLLNELMA 171 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + P ++AGDFN ++ + F + + + + Sbjct: 172 R-IPEGEPVIVAGDFNDWRQRAD------ASLQGSGLHEVFVQRFGAPAKSFPARWPLLR 224 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D + S LSDH P++++ Sbjct: 225 LDRIYVRNATSHRPKVLS-----------SRPWSHLSDHAPLAVEVT 260 >gi|313894410|ref|ZP_07827975.1| exodeoxyribonuclease III [Veillonella sp. oral taxon 158 str. F0412] gi|313441234|gb|EFR59661.1| exodeoxyribonuclease III [Veillonella sp. oral taxon 158 str. F0412] Length = 251 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 73/304 (24%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L ++ LDADI LQE Sbjct: 1 MKLISWNVNGLRAAVTKGFMES---------------FNELDADIFCLQETK-LQPEQIS 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++++ + + AV + + + + D R Sbjct: 45 LELPGYEQYWNSAVKKGY----------SGTAVFTRIKPLSVTNGIGIEEHDQEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ +++ + + + L + Sbjct: 91 -----VITAEYDNFYLVCCYTPNSQRELARLEYRMAWEDAFRNYLLEL--------DKKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + F Sbjct: 138 PVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAKMTELLGAGFTDTFRHLYPDAIEQY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ + + + + ++ SDHCP+ Sbjct: 198 SWWSYMGKARERNTGWRIDYFITSKRLDDKIQEAKIHQQIF-----------GSDHCPVE 246 Query: 300 IDYD 303 +D D Sbjct: 247 LDID 250 >gi|325983079|ref|YP_004295481.1| endonuclease/exonuclease/phosphatase [Nitrosomonas sp. AL212] gi|325532598|gb|ADZ27319.1| Endonuclease/exonuclease/phosphatase [Nitrosomonas sp. AL212] Length = 250 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 87/286 (30%), Gaps = 48/286 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA- 81 ++++++NI+ + ++ + +++DADIVFLQE+ ++ Sbjct: 5 SLKVLTYNIHKGFSATNLRF----------ILHEIKNFLRHIDADIVFLQEVHGERRISN 54 Query: 82 ---KVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 +P F + + K N H A+ K + + + Sbjct: 55 QRFDNWPNTQQFEFLADQVWHHYAYGKNAIYNSGHHGNAILSKYPIIEWDNINVSML--- 111 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R+ +R + ++ I + I + F +Q L I+ Sbjct: 112 --RSASRSLLHGVISIPETNQKIHIICIHFGLFGHE-----------RKRQLSALVKRIS 158 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + P +IAGDFN + F + + + Sbjct: 159 THVSASEPLIIAGDFNDWREQAEHY-----LHRDLGVKEVFKITRGAYARTFPAWMPVLS 213 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D +I+ RLSDH P+ ++ Sbjct: 214 MDRIYYRG-----------LDIIDCNRLHGQPWHRLSDHIPLLAEF 248 >gi|160889048|ref|ZP_02070051.1| hypothetical protein BACUNI_01468 [Bacteroides uniformis ATCC 8492] gi|156861515|gb|EDO54946.1| hypothetical protein BACUNI_01468 [Bacteroides uniformis ATCC 8492] Length = 335 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 39/341 (11%), Positives = 89/341 (26%), Gaps = 57/341 (16%) Query: 1 MIRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKN-----------S 46 M + VL + V + + + +N+ L + + + + Sbjct: 1 MRKLLVLCSFWLCVATLGAQNAERKLYSVAFYNLENLFDTIHDAGKNDYEFLPNGSYQWT 60 Query: 47 VKRTTSDYTLLRQYAKNLDADI-------VFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99 K+ S L + +L D+ + + E + + + + + Sbjct: 61 AKKYESKLQNLSKVLGSLSRDLVPEGPAFIGVAEAENSRVLEDLVKQPAISNYEFVHYEG 120 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 I A+ K V L + + R + + ++ G+++ V Sbjct: 121 P-----DRRGIDCALLYDPKQFSVTHSKLVLSTPFEGDTVHLTRGFLIVDGQLAGERVCV 175 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 + H S SP ++Q + LKD + + + + ++ GD N Sbjct: 176 IVNHWPSR-------GAKSPVRVHAARQVKALKDSLMR-SDKKLKLIVMGDMNDDPMDES 227 Query: 220 N-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 + + +D D V+ + K Sbjct: 228 MEVLGARKYPKQVKKGEFYNPWWVTLEDKGVGTLLYRGKWNLFDQIVISKPLLKAKKGLR 287 Query: 275 FSEI------------------LYNEDDIKSRGKRLSDHCP 297 + ++ SDH P Sbjct: 288 YDHNEVFIRDYLIQQDGKYKGSPLRTHGGRTWLNGYSDHLP 328 >gi|224498832|ref|ZP_03667181.1| hypothetical protein LmonF1_03653 [Listeria monocytogenes Finland 1988] Length = 256 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 78/285 (27%), Gaps = 35/285 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + ++NI K TL + D + ++E + + Sbjct: 2 FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEEPLLPQ-MRDM 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 W F + ++ + P + + S + R Sbjct: 54 KEMQDWDYFGVGRDDGFEKGEFTAVFYNSTRFTLLQEGHFWLSETPDVPSIHSTAM-FPR 112 Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V +++GK+ ++ + HL A L Sbjct: 113 ICVWGKFADLDGKQFYIFNTHLDHIS-------------EEARLFASQLLLKKAATIAEN 159 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDY 259 P +I GDFN + + N K D + K + + LR IDY Sbjct: 160 SPVIILGDFNTEPDTPTYNFITKKYQDAQLISQKRAKGPIGSFHDFRPLRPINELEKIDY 219 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + F Y + G SDH P++ + D+ Sbjct: 220 IFVSEE---------FQVCTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|297198840|ref|ZP_06916237.1| large secreted protein [Streptomyces sviceus ATCC 29083] gi|197711239|gb|EDY55273.1| large secreted protein [Streptomyces sviceus ATCC 29083] Length = 607 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 39/327 (11%), Positives = 87/327 (26%), Gaps = 68/327 (20%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++ + ++N+ L + + + K+ DIV L+E+ N Sbjct: 301 GELAVATYNVENLDPTDATF---------EEHASAIVNNLKS--PDIVSLEEIQDNNGAK 349 Query: 82 K------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 + S + + + +I + V Sbjct: 350 DDGTTAADVTVTKLIDAIVAAGGPKYDW-RSIDPANDTDGGEPGGNIRQVFLFNPERVSF 408 Query: 124 LQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 ++ P A + +R+ + G+ ++V+ Sbjct: 409 TDRAGGDATTAVGVTKVHGKAQLTASPGRIAPTDEAWKSSRKPLAGEFVFRGRTVFVIAN 468 Query: 163 HLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKIN 216 H S L + P S QQA + ++ + + GD N Sbjct: 469 HFNSKGGDFGLTSATQPVPRSSEIQRHQQATLVNAFVKDILDTQKNADVIALGDINDF-- 526 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKE-KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 D K ++ + L K S N+ +D ++ + + Sbjct: 527 ---EFSDTAKILEGDGELWSAIKSLPRSERYTYDYQGNQQVLDQILVSPSIRRGCDFA-- 581 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 + ++SDH P + + Sbjct: 582 ---YDSVHINSEFNDQISDHDPQVLRF 605 >gi|262198893|ref|YP_003270102.1| endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM 14365] gi|262082240|gb|ACY18209.1| Endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM 14365] Length = 300 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 85/286 (29%), Gaps = 60/286 (20%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A V ++VR+ +WN+ S L + + +DAD+V LQE+ Sbjct: 59 APVPERVRVATWNV---------------AIAGFSSIDTLARELREIDADVVLLQELEVG 103 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + + + V + + + L D Sbjct: 104 ARRSGRVNQPRALAEAMGMDYAFAPSV-PYDGGIFGLTVLTRLPLARAERHSL----DGE 158 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R A E+ ++ ++D+H + ++ L + I Sbjct: 159 IVYEPRIAFEVGACAGALELRLIDVHAEYVPETNTDN-------------LARLAELIGP 205 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 P +AGD N + G + + F +E I I Sbjct: 206 V--GDQPIAVAGDLNTRPANAGIV----ALLADTGLVDLFHEEGGEPA---------IYI 250 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 DY + + +++ES SDH P+ +++D Sbjct: 251 DYVLASPPLAE-IVRESVRV-----------DSDASDHAPLWVEFD 284 >gi|254386823|ref|ZP_05002112.1| sphingomyelinase C [Streptomyces sp. Mg1] gi|194345657|gb|EDX26623.1| sphingomyelinase C [Streptomyces sp. Mg1] Length = 334 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 37/296 (12%), Positives = 84/296 (28%), Gaps = 31/296 (10%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + ++S+N+ + + R T + + D+V LQE A + Sbjct: 48 LSVLSYNV--FLMSKSLYPNWGQDHRATEIPK--ASFYQGH--DVVVLQEAFDNGASDAL 101 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGAKD 135 + Y T + + V K V ++ A Sbjct: 102 KANSAAQYPYQTPVVGRSKSGWDATGGSYSATTPEDGGVTVLSKWPIVRKEQVVYKDACG 161 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + + N+ +++ +NG ++ V+ H +S + + ++Q + + ++ Sbjct: 162 ADWWS-NKGFAYVVLNVNGARVHVVGTHAQSTDPGCGAG----EAAQMRARQFKAIDAFL 216 Query: 196 T-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANK 249 + + ++AGD N N Sbjct: 217 DGKNIPASEQVIVAGDMNVDSRTPEYASMLANADLAGSDTRTGHPYSFDTALNSIANYRY 276 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------KRLSDHCPIS 299 + +DY + + + E+ + S LSDH P+ Sbjct: 277 PTDPREDLDYVLYRKGNARPANWENNVVKEQSAPWTVSSWGTSYTYTNLSDHYPLI 332 >gi|66817330|ref|XP_642518.1| hypothetical protein DDB_G0277701 [Dictyostelium discoideum AX4] gi|161784257|sp|P51173|APEA_DICDI RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName: Full=Class II apurinic/apyrimidinic(AP)-endonuclease gi|60470608|gb|EAL68586.1| hypothetical protein DDB_G0277701 [Dictyostelium discoideum AX4] Length = 361 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 82/309 (26%), Gaps = 77/309 (24%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAV 80 +++++SWN+ +Y + + D++ LQE + + + Sbjct: 103 NQMKIISWNVAGFKSVLSKGF---------------TEYVEKENPDVLCLQETKINPSNI 147 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K + + H T + +KK + G + Sbjct: 148 KKDQMPKGYEYHFIEADQKGHHG--------TGVLTKKKPNAIT------FGIGIAKHDN 193 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R ++ + + ++++ ++ + Y + QA +K Sbjct: 194 EGR-----VITLEYDQFYIVNTYIPNAGTRGLQRLDYRIKEWDVDFQA------YLEKLN 242 Query: 201 SLVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245 + P + GD N + + + + + Sbjct: 243 ATKPIIWCGDLNVAHTEIDLKNPKTNKKSAGFTIEERTSFSNFLEKGYVDSYRHFNPGKE 302 Query: 246 NANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +DYFV+ + + F SDHC Sbjct: 303 GSYTFWSYLGGGRSKNVGWRLDYFVVSKRLMDSIKISPFH----------RTSVMGSDHC 352 Query: 297 P--ISIDYD 303 P + +D + Sbjct: 353 PIGVVVDLN 361 >gi|254788112|ref|YP_003075541.1| endonuclease/exonuclease/phosphatase family protein [Teredinibacter turnerae T7901] gi|237685110|gb|ACR12374.1| endonuclease/exonuclease/phosphatase family protein [Teredinibacter turnerae T7901] Length = 250 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 44/291 (15%), Positives = 96/291 (32%), Gaps = 52/291 (17%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSY 77 A+KV++++ N++ LR+ + +D D+VFLQE+ Sbjct: 2 SARKVKILTVNMHKGFNAFNRRFT----------LHELREALREIDPDVVFLQEVLGEHR 51 Query: 78 NAVAK---VFPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + ++P+ + F + + H+ H A+ + ++ + Sbjct: 52 QFATRYTDLWPEQSQYEFLADQVWSAHAYGRNAVYPHGHHGNALLSRFPIDRWHNHDI-- 109 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 S S R + + + +K+ + +HL S Q + L Sbjct: 110 ---SLSGIEKRGLLYCHLNLGEQKLHAICVHLSLR-------------ESHRQIQLKRLS 153 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + + P V+AGDFN + + + + + + Sbjct: 154 KLVNS-LPADEPVVVAGDFND-----WRLKAENLLFNESRLVDAYTGHQGKPARSFPVAM 207 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +D + N+ + E +S R+SDH P+ ++ D Sbjct: 208 PLLRLDRIYLRCNSRYEI-----------ERLHRSPWSRISDHKPLMVELD 247 >gi|281177926|dbj|BAI54256.1| endonuclease/exonuclease/phosphatase [Escherichia coli SE15] Length = 253 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 81/288 (28%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ NI+ LR + + ADIV LQE+ + V Sbjct: 9 SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P + F + + + + + H AV + S Sbjct: 59 LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A R + + GK I V+ +HL + Q L +W Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + ++AGDFN + +D F + Sbjct: 161 VNE-LPDGESVLVAGDFNDWRQKANHPLKVLAGLDE-----IFTRAHGRPARTFPVQFPL 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + LSDH P+S + Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251 >gi|153806752|ref|ZP_01959420.1| hypothetical protein BACCAC_01023 [Bacteroides caccae ATCC 43185] gi|149131429|gb|EDM22635.1| hypothetical protein BACCAC_01023 [Bacteroides caccae ATCC 43185] Length = 366 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 41/299 (13%), Positives = 88/299 (29%), Gaps = 68/299 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + ++N++ + + T + +NL ADI+ QE + Sbjct: 110 LTVATYNVDGFN-----------REHTGYSCKEIAAQMRNLKADILCFQEF----GIDDE 154 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F ++ C S + +AV + + + + Sbjct: 155 FGVDSLCTALSDWPYH-YIPSSPERQHLLQLAVFSRYSIKKEHLIIYPNSGNCS------ 207 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP----------------------SC 181 + +E+NG+ I + + HL++ + + Sbjct: 208 --LWCDIEVNGRMIRLFNNHLQTTEVSRNKRKLEKELRQDNSQRAKRAALTLADGLHENF 265 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + QA ++ ++ S P ++ GDFN + + T+ + L F Sbjct: 266 RKRAVQANFINQLVSA---SPYPTLVCGDFNSLPSSYVYH-----TVKGDKLLDGFQTGG 317 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 K ++ + IDY + D S SDH P+ + Sbjct: 318 HGYMYTFKYFKHLLRIDYILHSPEL--------------KGLDYFSPDWEYSDHNPVVM 362 >gi|145354287|ref|XP_001421421.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|145354354|ref|XP_001421452.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144581658|gb|ABO99714.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144581689|gb|ABO99745.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 401 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 95/332 (28%), Gaps = 53/332 (15%) Query: 14 VPCTASVAQKVRLVSWNINTLS----EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 + +A + R++++N+ + + ++ + L+ + AD+V Sbjct: 78 LEPSAETSADYRIMTYNVLADAYAHTWGTMFPYFDTALAKVERRLQLVLEDILRSKADVV 137 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 LQE+ P T + +T+ + + + A++ + R Sbjct: 138 ALQEVDKKYHETLFVPVLTANGYIATDWVGKSGQTLEGCAMFFALSKFESIEREEAIKLT 197 Query: 130 LLGAK------DSFSRAGNRRAV----------ELLVEINGKKIWVLDIHLKSFCFLDSL 173 +G K A A+ + V +GK + V + HL Sbjct: 198 EIGDKALRRWIADDDNAELAMALKKITSIAQLARVKVRASGKSLCVGNTHLFFHPG---- 253 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN------------YLGNN 221 + L QA T P V+ GDFN + + Sbjct: 254 ------AMHLRVLQAHEFTTRATAFAA-GDPLVLCGDFNGEPEDGVIRYLTKGEISASDE 306 Query: 222 DDFWKTIDPNDSLIRFPKEKDSR---------CNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 D ++ + + +R N +DY + + Sbjct: 307 DWVRGSLFRAVPIGCGAHLRTARPLFSAGGFLEWTNYVGGFVGALDYVWCSTSDFASRAT 366 Query: 273 ESFSEILYN-EDDIKSRGKRLSDHCPISIDYD 303 ++ + SDH P+ +D D Sbjct: 367 SPLPDMSAVLAHTALPNAQFPSDHIPVIVDVD 398 >gi|91776730|ref|YP_546486.1| endonuclease/exonuclease/phosphatase [Methylobacillus flagellatus KT] gi|91710717|gb|ABE50645.1| Endonuclease/exonuclease/phosphatase [Methylobacillus flagellatus KT] Length = 251 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 81/286 (28%), Gaps = 47/286 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NI+ R+ + L AD+VFLQE+ + Sbjct: 5 IRIATFNIHKGVTSFNARFA----------LHEQRELIRKLQADVVFLQEVRDQHIKHSR 54 Query: 84 ------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + + K H A+ K V ++ + Sbjct: 55 RFSAWPLAGQVEFLADAVWSDYAYGKNSVYPAGHHGNALLSKYPIVKYENIDISA----- 109 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 ++ R + + + G + I + F +Q L+ I + Sbjct: 110 HQSEQRGMLHGEIAVPGWHQPLHCICVHLGLFAG-----------WRRKQIAILRKQIEE 158 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 P VIAGDFN G + + + K +R + + Sbjct: 159 VVPKDAPLVIAGDFNDWSMSAG--RELVHGLHLQEVFEHHSGGKPARSFPSFLPLF--RL 214 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + + + E + ++SDH ++ Sbjct: 215 DRIYVRG-----------FHVRHVEVHAGPQFMKVSDHAALTAVLS 249 >gi|154304302|ref|XP_001552556.1| hypothetical protein BC1G_08421 [Botryotinia fuckeliana B05.10] gi|150854223|gb|EDN29415.1| hypothetical protein BC1G_08421 [Botryotinia fuckeliana B05.10] Length = 742 Score = 85.4 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 43/353 (12%), Positives = 83/353 (23%), Gaps = 60/353 (16%) Query: 11 FFLVPCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 A ++ + S+NI + + + + DAD Sbjct: 363 LLNGTTVAPDIERFTVFSYNILCDNYVGPGQYGYVPSKALDWEHRRHEILCEIEERDADF 422 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRKKNVRVL 124 V LQE+ + N K + + + +K S + A + +L Sbjct: 423 VCLQEVDAENFREFFSVKLAYKDYKGVWWPKSRAKTMSESAAKAVDGCATFYKNNKFILL 482 Query: 125 QQSYPLL-----------GAKDSFSRAGNR--RAVELLVEINGKKIWVLDIHLKSFCFLD 171 + D F+R R AV E V+ + F Sbjct: 483 DKQLIDFANIAINRPDMKNQHDIFNRVMPRDHIAVLAFFENRLTGSRVIVANAHIFWDPA 542 Query: 172 SLENTYSPSCSLLSQQAQWLKD----------------WITQKKESLVPFVIAGDFNRKI 215 + Y + ++A + D + ++ +P ++ GD N Sbjct: 543 KFADKYQRFPACKDKKAYTIADDSDPDTPVEVAPEPAPSMEYTNKTQIPLIVCGDLNSTS 602 Query: 216 NYLGN------------------------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 + D + N Sbjct: 603 DSSVYELLATGRVAPDHPDLGNYQYGNFTRDGIEHPFSLRSAYSNLADGPQELTWTNYTP 662 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILY-NEDDIKSRGKRLSDHCPISIDYD 303 ID+ NA + + Y SDH + ++ Sbjct: 663 GFTDHIDHIWYSTNALENTDLLGPVDEEYMRTVPGLPHYHFPSDHLALLARFN 715 >gi|124087428|ref|XP_001346851.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|145474943|ref|XP_001423494.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|50057240|emb|CAH03224.1| Conserved hypothetical protein with homology to transcriptional regulator [Paramecium tetraurelia] gi|124390554|emb|CAK56096.1| unnamed protein product [Paramecium tetraurelia] Length = 326 Score = 85.4 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 88/306 (28%), Gaps = 35/306 (11%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVK--RTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + ++S+NI + + + ++ T + + K + DI LQE+ + + Sbjct: 31 HAISILSYNILAAIYCDQSQTGYAQNQYLKFSNRSTKIIEQLKIFNVDIFCLQEVDNIDF 90 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + K + I + + + K + L + G + R Sbjct: 91 YQERIKKLNYEICFVQRPQRPDGCLIAFKVDK--FKLLKSSEYSLDKMAINYGLPLQYQR 148 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 + V L + K++ + +IH D L+ Q Q ++ +K+ Sbjct: 149 QNVFQIVILEHILTKKQLVIGNIHTFWNPNQDDLKY---------FQIVQLVQKMEAEKE 199 Query: 200 ESLVPFVIAGDFNRKINYLGNN-------------------DDFWKTIDPNDSLIRFPKE 240 + GD N + + + + Sbjct: 200 SDDQILIFCGDLNSLPHSNPIQYIQKNKPIVERIEKSSNQIKLQKEIFEHYGPPKLNWQS 259 Query: 241 KDSRC--NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 N K IDY NA I E + ++ SDH PI Sbjct: 260 AYHPFPKFTNYTTDFKGCIDYIFY-HNANVEKILRLPEESVLQQEVALPNRNFPSDHLPI 318 Query: 299 SIDYDF 304 +DF Sbjct: 319 LASFDF 324 >gi|302885025|ref|XP_003041406.1| hypothetical protein NECHADRAFT_54419 [Nectria haematococca mpVI 77-13-4] gi|256722307|gb|EEU35693.1| hypothetical protein NECHADRAFT_54419 [Nectria haematococca mpVI 77-13-4] Length = 297 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 89/309 (28%), Gaps = 32/309 (10%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 + + + + K L+++N+ L + ++ + Sbjct: 9 QLLTVALCLSGLSSGQATGKFDLLTYNVAGLPPILNNNEVPGDKG---TNANTIGSILAK 65 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 D+V +QE +Y+A + R + ++T N Sbjct: 66 QAYDVVHMQEDFNYHA-------YIYKTDNHPHRTPTSGGVPFGDGLNTVANYNWANFAR 118 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + + L + D + + + + I+G ++ + ++H + Sbjct: 119 KKWNKCNLNSGDCLT---PKGFTYMRMTIDGIEVDLYNLHADAGS--------DKGDIDA 167 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL--GNNDDFWKTIDPND------SLI 235 S + W+ P +IAGD N + N + Sbjct: 168 RSAGIDQILAWVNSN-SKGKPVIIAGDTNDRWANSGRSINKLTDAGFTDSWVQLIRSGSY 226 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 C +D L SF+ ++ +++ G LSDH Sbjct: 227 PQAGATADPCKVPAADNKCEIVDKVFYRSGDSVKLTATSFN--YASKVFVQADGNILSDH 284 Query: 296 CPISIDYDF 304 PI +++ + Sbjct: 285 NPIHVEFSW 293 >gi|253566553|ref|ZP_04844006.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251944725|gb|EES85200.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 608 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 88/305 (28%), Gaps = 67/305 (21%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +RK +L L L +A +RL+++N+ + +G+ +Y + Sbjct: 1 MRKLLLLLFSALFVLSAQAEDVLRLMTYNVRNANGMDGIC-----------NYQRVANVI 49 Query: 62 KNLDADIVFLQEMGSYNAVA---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N DIV +QE+ S A + V + + I + Sbjct: 50 NNARPDIVAIQELDSMTARSNRTDVLKELAERTQLHPCFAPAID----YDGGKYGIGILS 105 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K + Q++ L G R R + + HL Sbjct: 106 KETPLRVQTFALPG------REEPRTLLVAEFP----EYVFACTHLSLTEED-------- 147 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--FWKTIDPNDSLIR 236 + + L+ + + PF +AGDFN + D ++ + Sbjct: 148 --------RMKSLEILKSVTANTRKPFFLAGDFNSDADSGFIKDLKSTFQILS------- 192 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 K +DY + + + S I SDH Sbjct: 193 ---NPKQPTYPAS--EPKETLDYLIALKQETPTFVVNSARVI---------DEPLASDHR 238 Query: 297 PISID 301 P+ ++ Sbjct: 239 PLLVE 243 >gi|170780681|ref|YP_001709013.1| putative exonuclease [Clavibacter michiganensis subsp. sepedonicus] gi|169155249|emb|CAQ00350.1| putative exonuclease [Clavibacter michiganensis subsp. sepedonicus] Length = 278 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 30/302 (9%), Positives = 78/302 (25%), Gaps = 59/302 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + + D D++ +QE+ Sbjct: 1 MRVATWNVN----------------SIRTRVGRVVDWLVREDVDVLAMQEIKCK------ 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ +A+ + + + A + Sbjct: 39 ----PEQFPMAAFEEADYEVAVHGLSQWNGVAIASRLPLEDVVTTFEGMPRFGKPDATGQ 94 Query: 144 RAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +E + + +++ + LD +Y L A + W+ + Sbjct: 95 PPLEARAMGATVAGVRLWSLYVPNGRALDDPHYSYK--LEWLQALAADTRAWLA--ADPA 150 Query: 203 VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P + GD+N + + Sbjct: 151 TPLALMGDWNVAPLDTDVWDPALFEGKTHTSEPERAAFAAFLDAGLADVVRPSIPEGYTY 210 Query: 248 NKNLRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + + + ID+ + + + + + +G SDH P+++D Sbjct: 211 WDYQQLRFPRNEGMRIDFILGNDRFSELVGAPRIH-------RDERKGDGPSDHVPVAVD 263 Query: 302 YD 303 D Sbjct: 264 LD 265 >gi|332886426|gb|EGK06670.1| hypothetical protein HMPREF9456_00544 [Dysgonomonas mossii DSM 22836] Length = 384 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 93/309 (30%), Gaps = 67/309 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-----GSYN 78 ++++++N+ + +G + N + Y N +ADI+ LQE S N Sbjct: 112 IKVLTYNVRAFNWAKGEAARNNP----------ILDYLVNSNADIICLQEFAVSPSNSKN 161 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + S ++ +A K + PL + + + Sbjct: 162 KKSIISEVEIKQKLKDYPYSRIIKLGSSRGNLIYGLACFSKFPIEKAERLPLESSYNGSA 221 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP------------------- 179 + IN KK+ +++ HL+S + Y Sbjct: 222 MYE--------LIINKKKVTLVNNHLESNRITSEDKKLYKEFFKTRDREMIGEVAMNVQT 273 Query: 180 ----SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 + + QA+ ++ I ++ ++ GDFN TI ++ + Sbjct: 274 RLGAAYKIREAQAKIIRSIIDKQ--ETDATIVCGDFNDSPISYAYY-----TIKGDNLVD 326 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + + ID+ + + + + + SDH Sbjct: 327 SYANTGFGQGITYHENKFWFRIDFIMHS--------------MAFQSYNCTVDKIKYSDH 372 Query: 296 CPISIDYDF 304 P+ F Sbjct: 373 YPVWTYLAF 381 >gi|327399082|ref|YP_004339951.1| exodeoxyribonuclease III Xth [Hippea maritima DSM 10411] gi|327181711|gb|AEA33892.1| exodeoxyribonuclease III Xth [Hippea maritima DSM 10411] Length = 258 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 80/304 (26%), Gaps = 75/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++VSWN+N + L+ + K D++ +QE N + Sbjct: 3 FKVVSWNVN----------------SIRARLELVLDFLKANQPDVLCMQETKVENVL--- 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + +A K ++ KD + Sbjct: 44 -------FPKEAFEELGYNVATAGQKRFNGVATVSKLNLEDIKTDFFDAEKDHKRSLLTK 96 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 I +++++ + D+ + Y + LK ++++ Sbjct: 97 I----------NDITIINLYFPNGQAPDTEQFQYKLNF------IYELKSFLSKHYSIED 140 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GDFN + D K + + F K A Sbjct: 141 KLIILGDFNVAMEENDVYDVKQMEGKIGFHPEERKALKELYSWGFVDLFRKFNKE--KAF 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDY D R K+ SDH P+ Sbjct: 199 SWWDYRAASFWKDRGLRIDYIWSTPTLADKCKDCFI-------DKSYRRKKKPSDHAPVV 251 Query: 300 IDYD 303 ++ Sbjct: 252 AVFE 255 >gi|139439406|ref|ZP_01772847.1| Hypothetical protein COLAER_01867 [Collinsella aerofaciens ATCC 25986] gi|133775185|gb|EBA39005.1| Hypothetical protein COLAER_01867 [Collinsella aerofaciens ATCC 25986] Length = 272 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 74/308 (24%), Gaps = 63/308 (20%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 Q SWN+N L Q A+ LD DI+ LQE Sbjct: 2 PQTYTFASWNVNGLRAVLKKDPSF-------------IQIAQELDVDILALQETKLQEGQ 48 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + +S +S + + + + + Sbjct: 49 VDI-DLPGYHQTWSYAERKGYSGTAVFSRQ-------EPLRVLRADALLPYAGGGEAAVL 100 Query: 141 GNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 + A E V K W +D++ + + + L+ Sbjct: 101 VAQAATEGRVCALEFDKFWFVDVYTPNAQNELARIDVRMAWDDAYRGFLNALER------ 154 Query: 200 ESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSR 244 E+ P V GDFN + + + Sbjct: 155 ETGKPVVTCGDFNVAHEEIDLKNPKSNRGNAGFSDEERGKFTELLNAGFTDTWRAANPDV 214 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + IDYF++ + + D SDH Sbjct: 215 EGVYSWWSYRFNARKNNAGWRIDYFLVSDSIAANVR-----------DTGIRGDIFGSDH 263 Query: 296 CPISIDYD 303 CP+++ + Sbjct: 264 CPVTLTLE 271 >gi|118588886|ref|ZP_01546293.1| Endonuclease/exonuclease/phosphatase [Stappia aggregata IAM 12614] gi|118438215|gb|EAV44849.1| Endonuclease/exonuclease/phosphatase [Stappia aggregata IAM 12614] Length = 238 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 76/281 (27%), Gaps = 54/281 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ S+NI K+ + + LD DI+ LQE + Sbjct: 2 LKIGSYNIQ-----------KSIGVDARRRPDRTLKVIQELDCDILALQEADKRFGPRES 50 Query: 84 -FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + T + + S AI VR + + L Sbjct: 51 TLDRETILHETDYRPVPFATGDKSLGWHGNAILVRNSIGILDHRRLDLPTL-------EP 103 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R AV + + + G+KI V +HL + L Q D++ Sbjct: 104 RGAVAVDLLVAGEKIRVAAMHLSLIGHF------RKKQITSLMHQLHEHLDYL------- 150 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 P V+ GD N + + F + E + + + +D + Sbjct: 151 -PTVLIGDLNEWRDSADSIKLFEE-----------RYEVTTPGRSFPSPLPVGSLDRIIT 198 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + SDH P+ + Sbjct: 199 SPEFIVRQAGV----------HKSKTARIASDHLPVWANLT 229 >gi|126698940|ref|YP_001087837.1| putative exodeoxyribonuclease [Clostridium difficile 630] gi|254974886|ref|ZP_05271358.1| putative exodeoxyribonuclease [Clostridium difficile QCD-66c26] gi|255092273|ref|ZP_05321751.1| putative exodeoxyribonuclease [Clostridium difficile CIP 107932] gi|255100359|ref|ZP_05329336.1| putative exodeoxyribonuclease [Clostridium difficile QCD-63q42] gi|255306301|ref|ZP_05350472.1| putative exodeoxyribonuclease [Clostridium difficile ATCC 43255] gi|255314013|ref|ZP_05355596.1| putative exodeoxyribonuclease [Clostridium difficile QCD-76w55] gi|255516693|ref|ZP_05384369.1| putative exodeoxyribonuclease [Clostridium difficile QCD-97b34] gi|255649791|ref|ZP_05396693.1| putative exodeoxyribonuclease [Clostridium difficile QCD-37x79] gi|306519893|ref|ZP_07406240.1| putative exodeoxyribonuclease [Clostridium difficile QCD-32g58] gi|115250377|emb|CAJ68199.1| Exodeoxyribonuclease [Clostridium difficile] Length = 250 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 81/305 (26%), Gaps = 82/305 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N + G + K +DADI LQE Sbjct: 1 MKFISWNVNGIRACVGKGF---------------LDFFKEVDADIFCLQETKLQEG-QIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S + + Sbjct: 45 LDLPGYFQYWNYAERKGYSGTAIFTK-----------------------------KEPLK 75 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT--QKKES 201 + +E + K+ V+ + + F F+ L + +W D+I K ++ Sbjct: 76 VMYGINIEEHDKEGRVITLEFEDFYFVTVYTPNSQSELKRLEYRTRWEDDFIDYLTKLDN 135 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P ++ GD N + + + + + + + Sbjct: 136 HKPVIVCGDMNVAHKEIDLKNPKNNMKNAGFTKEEREKFSKLLDSGFIDTYRYFNPDKEG 195 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDYF + L+ + SDHCP Sbjct: 196 VYSWWSYRFNARKNNAGWRIDYFCASKKLEDRLVSADIHTEIL-----------GSDHCP 244 Query: 298 ISIDY 302 + ++ Sbjct: 245 VELEI 249 >gi|301766552|ref|XP_002918698.1| PREDICTED: endonuclease/exonuclease/phosphatase family domain-containing protein 1-like [Ailuropoda melanoleuca] gi|281339468|gb|EFB15052.1| hypothetical protein PANDA_007201 [Ailuropoda melanoleuca] Length = 569 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 35/296 (11%), Positives = 81/296 (27%), Gaps = 35/296 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+ S V N R TLL K ++ +QE+ A+ K Sbjct: 261 LRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 311 Query: 84 FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVR-KKNVRVLQQSYPL 130 + I + + + V + + Sbjct: 312 CTELNQPILPNIRKWKGPRGCWKAAVADMPSTQLQKGAGFSGFLWDATAGVELRDSTSQE 371 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + + ++ + ++++HL + + + S S Sbjct: 372 SSPGNGHGKPMGPSPYLARFKVGSNDLTLVNLHLATSTLPGGENLSRNHSDSHR---LAS 428 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + + + ++ GDF + + + + P + + KN Sbjct: 429 FVQTLQETLKGEKDMIVLGDFGQGPDSSDYD-----ILRKEKFYPLVPAHTFTNI-STKN 482 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302 + +D + ++ K I S+HCP+ ++ Sbjct: 483 PQGSKSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEF 538 >gi|262166640|ref|ZP_06034377.1| extracellular nuclease-related protein [Vibrio mimicus VM223] gi|262026356|gb|EEY45024.1| extracellular nuclease-related protein [Vibrio mimicus VM223] Length = 734 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 50/373 (13%), Positives = 91/373 (24%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R S+ + LDADIV L E Sbjct: 338 GDLRIATFNVLNYFNSPFGGDANQHGGNRGASNLAEFEVQQAKIVNAIVRLDADIVGLME 397 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116 + + S R D I T + Sbjct: 398 IENNGFGEGSAIAQLVNQLNSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 457 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162 R K V+++Q + ++ + R + ++ G KI V Sbjct: 458 RDKVVKLVQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 517 Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211 HLKS + + L Q + VI GD Sbjct: 518 HLKSKGSACWEDAAPVEQGGQAGQDLDFQGACENFRVAAAVALGDALAKIDGHKVILGDM 577 Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243 N D I + + K Sbjct: 578 NSYGMEDPMLILTDYTPEKYGKTIRAARNTYIAGVEQFGDAGAEIKHSYGYLNAVAMKHP 637 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290 + +D+ ++ + ++ + I E + Sbjct: 638 DSWSYSFNDEVGALDHLLVSPSLKTKVVDATDWHINGAESTLFDYNDEFKGNLPKYNDQF 697 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 698 RASDHDPAVLELN 710 >gi|260172525|ref|ZP_05758937.1| hypothetical protein BacD2_11731 [Bacteroides sp. D2] gi|315920818|ref|ZP_07917058.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313694693|gb|EFS31528.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 299 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 37/314 (11%), Positives = 83/314 (26%), Gaps = 48/314 (15%) Query: 5 YVLALVFFLVPCTA-------------SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT 51 ++L+ F + + + + + +NI + ++G +W N Sbjct: 12 FLLSFFFIGCSNSTIEDEPEMPPFNNETPSNSLCVAQFNIRYDTPEDGQYVWANRKTMAK 71 Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 + + D DI + E N + + + + + Sbjct: 72 -------EIITSHDFDIFGVNECL-LNQLNDLLELKQYEYIGTGRDDGKEAGEFCPILYK 123 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 +++ + + D S++ N + F Sbjct: 124 -----KERVELLYHGQFWYSETPDKPSKSWNSFCNRICTWGK------FKDKKTDKDFFF 172 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 + S A+ L + + +P+ GD N + + + Sbjct: 173 FSSHFDHVSNEARVNSAKLLVQKVQEIAG-DLPYFCTGDLNCDPDEEPISFILNSGLF-K 230 Query: 232 DSLIRFPKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNE-DDIK 286 DS IDY ++ ++S + + D Sbjct: 231 DSYSISETTPKGPAGTLHYWNFDFNPEHRIDYILV---------EKSIKVLSFETITDDA 281 Query: 287 SRGKRLSDHCPISI 300 +G+ SDH PI I Sbjct: 282 RQGRFSSDHYPIMI 295 >gi|209542628|ref|YP_002274857.1| exodeoxyribonuclease III Xth [Gluconacetobacter diazotrophicus PAl 5] gi|209530305|gb|ACI50242.1| exodeoxyribonuclease III Xth [Gluconacetobacter diazotrophicus PAl 5] Length = 258 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 80/304 (26%), Gaps = 72/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N + + + D++ LQE+ +A Sbjct: 1 MKIASWNVN----------------SVRQRQAHVLDWLEREKPDLLGLQEIKCEDAA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-VLQQSYPLLGAKDSFSRAGN 142 R + + +A+ + V ++ P L + +R Sbjct: 42 -------FPAEAFRAAGYDCVVVGQKSYNGVAILSRLPFSVTARALPFLDGEALQAR--- 91 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + +E G + +++L + S + + L E+ Sbjct: 92 ----YVEIEAGG--LTFGNLYLPNGNSGGSAGYEAKLAF------MEALALHARALLEAG 139 Query: 203 VPFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 FV+AGD+N + ++ + Sbjct: 140 RDFVLAGDYNVCPTDEDCAPGALPPTDALVRPESRAAFRRLIWLGLTDALRALHPHGRYY 199 Query: 248 NKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ID+ ++ + L D + + SDH P+ Sbjct: 200 TFWDYQAGAWPRDCGLRIDHALLSPRIAERLDSA-------QPDRDERGRAQPSDHVPLV 252 Query: 300 IDYD 303 I D Sbjct: 253 ITLD 256 >gi|149187109|ref|ZP_01865414.1| metal-dependent hydrolase [Erythrobacter sp. SD-21] gi|148829261|gb|EDL47707.1| metal-dependent hydrolase [Erythrobacter sp. SD-21] Length = 233 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 41/280 (14%), Positives = 79/280 (28%), Gaps = 53/280 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + S+NI+ K D + +DADI+ LQE + Sbjct: 3 LTFASYNIH-----------KAVGLDRKRDPERILSVLHEIDADIIALQEADRRIGARES 51 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + S A+ VR+ ++ L R Sbjct: 52 CLPRSEIDDSHWRLVEVAKRPRSIGWHGNALLVRRNFEVHEGEALDLPTL-------EPR 104 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + + G ++ ++ HL S Q + L ++ + + Sbjct: 105 GAACGEITVEGHRLRIIGTHLDL-------------SGLRRRDQIRSLVGFVEKC-SRNL 150 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 P VI GDFN+ + +D + + + + +D V Sbjct: 151 PTVIMGDFNQW------GRATGAMREFSDRWLVVT-----PGRSYPSRQPVATLDRIVAS 199 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + E + SDH P+ D Sbjct: 200 KH----------WGCVEAEVHHTGQSSVASDHLPVVATLD 229 >gi|254442161|ref|ZP_05055637.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae bacterium DG1235] gi|198256469|gb|EDY80777.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae bacterium DG1235] Length = 1171 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 103/312 (33%), Gaps = 32/312 (10%) Query: 24 VRLVSWNINTLSEQEGVSLWKN-----SVKRTTSDYTLLRQYAK--NLDADIVFLQEMGS 76 + + S N L + + + + L +I+ +QE+ + Sbjct: 848 LNVASLNTENLFDLIDDPDKNDQGSTPTPEELEIKLEKLSATIGIGLEFPEIICVQEVEN 907 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSN-NDIHTAIAVRKKNVRVLQ----QSYPLL 131 + + + + ++ + S S+ I T + V++ + Sbjct: 908 QAVLQLLADRLNDKLPFARLDYLAVSLETSDNRGIETGYLYDSRRVKLEDLYQLTDEIVP 967 Query: 132 GAKDSFSR---AGNRRAVELLVEINGKKIWVLDIHLKSFCFLD----SLENTYSPSCSLL 184 G D+F + R + + + G++I +++ H KS + + S Sbjct: 968 GVSDAFGATSVSKGREPLVGVFKSKGREITIVNNHFKSKGGDGPLYGTEQPPVRESEIQR 1027 Query: 185 SQQAQWLKDWITQKKESLVPFVIA--GDFNRKINYLGNNDD--FWKTIDPNDSLIRF--- 237 QA L+D+ ++A GDFN D I+ + Sbjct: 1028 KLQATVLRDFADILLAENPNALLAITGDFNDFQFGEPGEGDSHTLGIIEGEEGEYPLENI 1087 Query: 238 --PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----KR 291 + ++ + N +D+F++ + K L++ F + D +R Sbjct: 1088 VKTRIPENSRFSYVYEGNSQALDHFLLSKKLKKKLLRAEFIHLNAAYLDEFMEDASVLER 1147 Query: 292 LSDHCPISIDYD 303 SDH P+ + ++ Sbjct: 1148 SSDHDPLLLKFN 1159 >gi|192289967|ref|YP_001990572.1| 5'-nucleotidase [Rhodopseudomonas palustris TIE-1] gi|192283716|gb|ACF00097.1| 5'-Nucleotidase domain protein [Rhodopseudomonas palustris TIE-1] Length = 2775 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 38/342 (11%), Positives = 88/342 (25%), Gaps = 67/342 (19%) Query: 22 QKVRLVSWNINTLSEQ---------EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++++ S N+ + ++ L +++ D++ L Sbjct: 631 GRLKVASCNVLNYFATLDNGGTTAIDAAPRGADNAAEFARQTEKLVNTILDMNVDVLALT 690 Query: 73 EMGSY-------NAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVRVL 124 E+ + NA+ + + ++ + D I + +V++ Sbjct: 691 ELENDFSASSSGNAIKYLVDQLNGKAGAGVYAWVDPGHQFVGGDAIAVGFIYKTASVKIA 750 Query: 125 QQSYPLL-------------------GAKDSFSRAGNRRAVELLVE--INGKKIWVLDIH 163 + +R A+ + E G+ + H Sbjct: 751 DGTTVETLNDADLPGLGLGGLIGQSTVGAVFDGENTSRNALAVTFEEISTGETFTAIANH 810 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-------TQKKESLVPFVIAGDFNRKIN 216 LKS + + Q + L ++ GDFN Sbjct: 811 LKSKSGTGTGVDADQGDGQGNWQNQRELAATALTAWAASDPTGSKDPDVMLLGDFNGYAQ 870 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 K I+ +E + +DY + + + + Sbjct: 871 EHST-----KIIETAGFENLHSRET--GAYSYVFDGQTGTLDYAFTNGSLGSQVSGVTTW 923 Query: 277 EILYNEDDIKSRG---------------KRLSDHCPISIDYD 303 I +E D+ R+SDH P+ + + Sbjct: 924 HINADEADVLDYNTDYGRDTSIFDGSAPTRVSDHDPVVVGLN 965 >gi|170595251|ref|XP_001902307.1| Endonuclease/Exonuclease/phosphatase family protein [Brugia malayi] gi|158590094|gb|EDP28850.1| Endonuclease/Exonuclease/phosphatase family protein [Brugia malayi] Length = 391 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 43/296 (14%), Positives = 80/296 (27%), Gaps = 36/296 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+VS N L W + + + DIV L+E+ ++ Sbjct: 5 LRVVSLNCWALPLP-----WPFRSSDHALRIKKIGEALLQNEYDIVALEEVWGEGDFLRL 59 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS---RA 140 ++ + R V L + L G Sbjct: 60 ------QKALKDVYAYSYYFHSGFTGSGICVFSRHPIVSTLMHRFTLNGFAHHIHRGDWF 113 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 G + + +EI +I HL + + QA L ++ Sbjct: 114 GGKGVGLVEIEIEQYRINFYAAHLHAEYDPNKDLY-----LPHRLAQAFELAQFVKHTSY 168 Query: 201 SLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 S ++AGDFN + + L D W + + C + L+ Sbjct: 169 SADALILAGDFNIEPDNLAYQLIMKNANLRDAWIQKPNSCDDCGATFGRLDNCYTPQRLK 228 Query: 253 ----NKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +DY + + L ++ + SDH I ++ Sbjct: 229 NKKCYGKRLDYIMYRSGKSKIELKLCEIRMNRIHDQKSINY----SDHVGIYAEFS 280 >gi|117622972|ref|YP_851885.1| metal-dependent hydrolase [Escherichia coli APEC O1] gi|115512096|gb|ABJ00171.1| Metal-dependent hydrolase [Escherichia coli APEC O1] Length = 253 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 81/288 (28%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ NI+ LR + + DIV LQE+ + V Sbjct: 9 SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSTDIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P + F + + + + + H AV + S Sbjct: 59 LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A R + + GK I V+ +HL + Q L +W Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + P ++AGDFN + +D F + Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + LSDH P+S + Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251 >gi|257413807|ref|ZP_04744296.2| exodeoxyribonuclease III [Roseburia intestinalis L1-82] gi|257202214|gb|EEV00499.1| exodeoxyribonuclease III [Roseburia intestinalis L1-82] gi|291538795|emb|CBL11906.1| exodeoxyribonuclease III [Roseburia intestinalis XB6B4] Length = 256 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 73/306 (23%), Gaps = 78/306 (25%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++L+SWN+N L + DADI +QE Sbjct: 3 NTMKLISWNVNGLRACIQKGF---------------LDFFHETDADIFCIQESKLQEG-Q 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 P + +++ + ++ A+ K + + D R Sbjct: 47 IDLPLPGYFSYWN----------YAKKKGYSGTAIFTKKEPLNVTYGIGIEEHDKEGR-- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 ++ + +++ + + + + L + Sbjct: 95 -------VITLEYPDFYMVTCYTPNSQNELARLPYRMQWEDDFRAYLKRL--------DG 139 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P ++ GD N + + F Sbjct: 140 SKPVILCGDLNVAHEEIDLKNPKTNRKNAGFSDEEREKMTKLLDAGFTDTFRYFYPDTEQ 199 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDYF+ + L ++ SDHCP Sbjct: 200 IYSWWSYRFRAREKNAGWRIDYFITSKRMNDKLTGAKIHTDVF-----------GSDHCP 248 Query: 298 ISIDYD 303 + +D D Sbjct: 249 VELDID 254 >gi|85096028|ref|XP_960186.1| hypothetical protein NCU09788 [Neurospora crassa OR74A] gi|28921667|gb|EAA30950.1| hypothetical protein NCU09788 [Neurospora crassa OR74A] Length = 622 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 36/334 (10%), Positives = 88/334 (26%), Gaps = 73/334 (21%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQE 73 ++ + + ++N+ L+ T++ + D++F+QE Sbjct: 290 VSSGSCNGLTVGTYNVENLAP-------------TSAHMPKVASQIVKYLKSPDLLFIQE 336 Query: 74 MGSYNAVAKV------------------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + T+ + + E + + +I TA Sbjct: 337 VQDNTGATDDGVVSANKTLATLISAIQSAGGPTYD-YVTIEPVNDEDGGQPGGNIRTAYL 395 Query: 116 VRKKNVRVLQ-----------------------QSYPLLGAKDSFSRAGNRRAVELLV-- 150 + + + P + + R+ + Sbjct: 396 YNPSILSLKNPNPGSSTDANEVIVDAETGQPSLKFNPGRVDPLNAAWRATRKPLVAEWIA 455 Query: 151 EINGKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVP 204 + K + +++H+ S S+ P + +QQA+ +I++ + + Sbjct: 456 KDGKKPFFTVNVHMTSKGGGSSVHGDVRPPINGGVAKRTQQAEITAKFISKILQADPAAR 515 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 + AGDFN + + L N +D+ + Sbjct: 516 VIAAGDFNEFAFVKPL--TTFAEVSGLKELDEALNTPVENRYTYSYDMNAQALDHMYISP 573 Query: 265 NAY-KFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + D +SDH P Sbjct: 574 VLASSKSKFQHIHVSSWVTDSAV-----VSDHDP 602 >gi|228923803|ref|ZP_04087081.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835932|gb|EEM81295.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 339 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 46/327 (14%), Positives = 108/327 (33%), Gaps = 70/327 (21%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T ++ + + +N ++D Sbjct: 37 ATGHEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 96 Query: 71 LQEMG----------SYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAI 114 LQE+ + + K P + + + N + Sbjct: 97 LQEVDIKSLRSFDVNGHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYA-----EAGL 151 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLD 171 + K + + L G + R + R VE + +N GK + ++++HL + Sbjct: 152 STFSKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA----- 206 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 Y + QQ ++LK+++ + E ++ GD+N+ ++ +D + P Sbjct: 207 -----YDEGGKIRKQQVEYLKEYMNKHYEKGDYVIMGGDWNQLVSNAQLSDPKFVKERPE 261 Query: 232 DSLIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESF 275 + D + ID F++ N ++ Sbjct: 262 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQG 319 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + SDH P+S + Sbjct: 320 KDLKFEN----------SDHNPVSAVF 336 >gi|229193352|ref|ZP_04320302.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876] gi|228590153|gb|EEK48022.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876] Length = 352 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 46/327 (14%), Positives = 109/327 (33%), Gaps = 70/327 (21%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T ++ + + +N ++D Sbjct: 50 ANGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMG----------SYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAI 114 LQE+ + + K P + + + N + Sbjct: 110 LQEVDIKSLRSFDVNGHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYA-----EAGL 164 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLD 171 + K + + L G + R + R VE + +N GK + ++++HL + Sbjct: 165 STFSKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA----- 219 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 Y + QQ ++LK+++ + E+ ++ GD+N+ ++ +D + P Sbjct: 220 -----YDEGGKIRKQQVEYLKEYMNKHYENGDYVIMGGDWNQLVSNAQLSDPKFVKERPE 274 Query: 232 DSLIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESF 275 + D + ID F++ N ++ Sbjct: 275 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQG 332 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + SDH P+S + Sbjct: 333 KDLKFEN----------SDHNPVSAVF 349 >gi|256377138|ref|YP_003100798.1| endonuclease/exonuclease/phosphatase [Actinosynnema mirum DSM 43827] gi|255921441|gb|ACU36952.1| Endonuclease/exonuclease/phosphatase [Actinosynnema mirum DSM 43827] Length = 895 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 76/288 (26%), Gaps = 37/288 (12%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 TA+ +R+++WN + + RT LL + DAD++ LQE+ Sbjct: 108 SGTAAPGASLRVLTWNTLW-------DKYNPELVRTARRRPLLLAELQVADADVIALQEV 160 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 +A + W T S T + + + + Sbjct: 161 EPE--LAAMLAAAPWVRERYTFDTAPT----SAAVGDTGLLLLSRVPVRESGRHAF---- 210 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + + + VE + V+ HL S D + + Sbjct: 211 -----SRRKGLAAITVETAAGPVVVVSTHLTSDHSADGASRRRAELAAAAEV-------- 257 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 ++ +V D D W + F + Sbjct: 258 LSGVDGEVVVVGDFNDGGPLPASALGARDAWVEVRGPGGAPTFDPATNPLAALGSLTGRS 317 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D ++ +A + D + G SDH + D Sbjct: 318 SRLDRVLLRGSARVEAVA-------LVGDVPTAAGLFASDHYGVRADL 358 >gi|298481071|ref|ZP_06999265.1| exodeoxyribonuclease III [Bacteroides sp. D22] gi|298272645|gb|EFI14212.1| exodeoxyribonuclease III [Bacteroides sp. D22] Length = 254 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 30/302 (9%), Positives = 82/302 (27%), Gaps = 73/302 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+N L L ++ + DI+ LQE Sbjct: 2 MKIITYNVNGLRAAVSKGLP---------------EWLAQENPDILCLQETK-------- 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + ++ +A+ K + G R Sbjct: 39 LQPDQYPGEVFEALGYKSYLYSAQKKGYSGVAILTKREP----DHVEYGMGMEAYDNEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + V+ ++ S D + + + + ++ + ++S Sbjct: 95 F-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMGWLEDFQKYVMELQKSRP 142 Query: 204 PFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD+N + + + + + Sbjct: 143 NLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLSAGYVDSFRTLCPEKQEYT 202 Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + R IDY ++ + L + + SDHCP+++ Sbjct: 203 WWSYRFNSRAKNKGWRIDYCMVSEPVRPLLKRAYILNEAVH-----------SDHCPMAL 251 Query: 301 DY 302 + Sbjct: 252 EI 253 >gi|251779069|ref|ZP_04821989.1| exodeoxyribonuclease III [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083384|gb|EES49274.1| exodeoxyribonuclease III [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 251 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 30/300 (10%), Positives = 76/300 (25%), Gaps = 78/300 (26%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +L+SWN+N L K +ADI +QE Sbjct: 3 KLISWNVNGLRACVKKGF---------------LDILKESNADIFCVQESKLQEG-QIDL 46 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + + +++ +S + G R Sbjct: 47 NLDGYYDYWNYAEKKGYSGTAVFSKEKPLNISL--------------GIGIEEHDKEGR- 91 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ + ++ ++++++ + + + + L Sbjct: 92 ----VLTLEFEEFYLVNVYTPNSQQKLARIDYRMAWENDFRHYLNELNK--------DKS 139 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GD N + + + + + + + A Sbjct: 140 VIVCGDLNVAHKEIDLKNPKNNRNNAGFSDEEREKFGELLKSGFIDTYRYFYPGKEGAYS 199 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF++ ++ L+ + + SDHCP+ + Sbjct: 200 WWSYRFNARANNAGWRIDYFLVSKDFEDRLVDANIHTQI-----------EGSDHCPVEL 248 >gi|196046040|ref|ZP_03113268.1| putative secreted protein [Bacillus cereus 03BB108] gi|196023095|gb|EDX61774.1| putative secreted protein [Bacillus cereus 03BB108] Length = 264 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 40/292 (13%), Positives = 89/292 (30%), Gaps = 42/292 (14%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + +R+ ++NI + + +++ I+ LQE+ S + Sbjct: 5 SDILRIATFNIWN------------HESLWFERLEAICEEIRSISPHILALQEVRSSVNL 52 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + ++ + +A K + +++ ++S Sbjct: 53 NSKKNVAQY--IAGRIGYPFCIFKEYPDSPDEGLAFLSKIPIIAEEAIWETDIEESNYC- 109 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 A+ + G K V ++HL S + +Q + +WI + Sbjct: 110 ----AIRITFTYKGCKFGVTNVHLNW------------KSSRIRQEQMNTVNNWIENRAS 153 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE--KDSRCNANKNLRNKI--- 255 ++ GDFN + + K + + KN K Sbjct: 154 DYE--LLCGDFNDDPFSMVHQYLIRKHWIDVAQFKEIEENMIAQPTLDYRKNPNLKDDVK 211 Query: 256 ---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D+ ++ +NA + ++ E + S G SDH + +D F Sbjct: 212 QEKRYDWIMIQENAAFEF-PTIENVSIFGESALTSTGMFPSDHYGVFVDLKF 262 >gi|254422509|ref|ZP_05036227.1| endonuclease/exonuclease/phosphatase family [Synechococcus sp. PCC 7335] gi|196189998|gb|EDX84962.1| endonuclease/exonuclease/phosphatase family [Synechococcus sp. PCC 7335] Length = 351 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 96/307 (31%), Gaps = 53/307 (17%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE----------M 74 +VS+N+ LS + K ++ + + K L+ DIV LQE + Sbjct: 62 SIVSYNLGYLSGLTNNTTTKLECAAFDANQQQVIRALKELEPDIVALQEVDFGSKRSCYV 121 Query: 75 GSYNAVAKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 A+A+ + I + + + + ++ L Sbjct: 122 DQSKAIAQGLGLDFGAIAIGWDKNYVPFPYWPPAAHFGKMLSGQSTISRHPIQENSRIVL 181 Query: 131 LGAKDSFSRAGN----RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 D+ R A ++ + + V+++HL++F + Sbjct: 182 EKVADNPFYYNAFYLDRLAQVTQIQFGVQPLIVINVHLEAF------------NEPTRVS 229 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-----------FWKTIDPNDSLI 235 Q Q+++ + + P ++ GDFN +N D + + + Sbjct: 230 QTQFVRS-LAEDYAKTYPVILVGDFNSALNRGTFIDASGANHGETQFSIKEMLASEVLVS 288 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 P+ + + + + +DY N + + + + SDH Sbjct: 289 AVPQSDWIKDLTFPSNQPEYKLDYIFYTPNTIEMVETQVV-----------AAAGEASDH 337 Query: 296 CPISIDY 302 P+ + + Sbjct: 338 LPVMMRF 344 >gi|157377075|ref|YP_001475675.1| endonuclease/exonuclease/phosphatase [Shewanella sediminis HAW-EB3] gi|157319449|gb|ABV38547.1| endonuclease/exonuclease/phosphatase [Shewanella sediminis HAW-EB3] Length = 885 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 46/387 (11%), Positives = 102/387 (26%), Gaps = 101/387 (26%) Query: 19 SVAQKVRLVSWNINTLSEQE---GVSLWKNSVKRTTSD------------------YTLL 57 + +R+ S+N+ L + G L + +D T + Sbjct: 459 ATKGDIRVASFNVLNLFTSDSDIGGPLNATCEDQADADASRGCGRGAHSLDEYLLQRTKI 518 Query: 58 RQYAKNLDADIVFLQEMGSY------------NAVAKVFPKNTWCIFYSTERLINHSKRD 105 K +DADIV L E+ + N++ P F + Sbjct: 519 VNALKEMDADIVGLMEIENNGFSESSSIQYLLNSINAELPAIDAYKFIEIADADKYQGEF 578 Query: 106 SNND-IHTAIAVRKKNVRVLQQSYPLLGAKD------------------SFSRAGNRRAV 146 +D I I R V+ ++ + + R ++ Sbjct: 579 VGSDAIMVGILYRPNKVKPAGDAFVIATPEQHAAEGVATRGEGDDVETSPSYNKYQRHSL 638 Query: 147 ELLVEINGKKIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWI 195 +I+ +K+ ++ HLKS + A+ + D + Sbjct: 639 AQTFQIHDEKLTIVVNHLKSKGSGCLEDWLEFSESKDPADLQGKCNEFRVSAAKAIGDSL 698 Query: 196 TQKKES------------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN------------ 231 + P + D++ + W T++ Sbjct: 699 KDVEGDLLVIGDLNAYGMEDPVRVLTDYDAATSTRDVVTASWTTLNGETYEQEGSVIEKG 758 Query: 232 -DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + + + +D+ + + +A L+ I E + Sbjct: 759 YGLINLNTQAHGAETYSYSYGGELGNLDHALGNASAAARLVDIQDWHINSVESGLFEYSG 818 Query: 291 RL-------------SDHCPISIDYDF 304 + SDH P+ + ++ Sbjct: 819 KYTGDLVKSENVYSSSDHDPVIVALNY 845 >gi|126341987|ref|XP_001374214.1| PREDICTED: similar to DNL1L gene product [Monodelphis domestica] Length = 644 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 36/289 (12%), Positives = 83/289 (28%), Gaps = 41/289 (14%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY----- 77 +R+ ++NI + E + + +L + DI +QE+ Sbjct: 374 TLRICAFNIQSFGE---------AKAKRPEIMRVLVKVISRC--DICLVQEVRDSKGTAM 422 Query: 78 ----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + P + + + S + K + R V ++ Y + A Sbjct: 423 SLLLQELNRADPGHLYEVLESRRLGLGSYKEQNV------FVYRADVVSIMDS-YQVPEA 475 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + S A R L + C ++ L + Q LK Sbjct: 476 EPSQEEAFLRGPFVARFCWPDSGSCNLVLLSHHACPRNAP-----RELDQLYRVVQDLKR 530 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 ++ GDFN ++ + + ++ + + Sbjct: 531 LWDV-----QDVMLLGDFNAGCTFVPPEAWPGIRLWHHPDFHWLIGDQVDTTVSRRTHCA 585 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISI 300 I V + + ++ S + ++ ++SDH P+ + Sbjct: 586 YDRI--IVHGKALLQAVVPGSAKTFNFQKELGMSEEEALQVSDHYPVEV 632 Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 37/299 (12%), Positives = 81/299 (27%), Gaps = 35/299 (11%) Query: 9 LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 L F L+ + A R+ ++N L+ L + DI Sbjct: 49 LFFVLLLADGTSA--FRICAFNAQRLTVT---------KVAKVRIMDSLVRILARC--DI 95 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 LQE+ + A F + +S S + + V ++ Sbjct: 96 TVLQEVVDTSGDAIPLLLRDLNRF---DDSGPYSFLSSPLLGRSTYMEKYVYVYRSHKTQ 152 Query: 129 PLLGA-KDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 L D S R + K K+ ++ +H L+ Y ++ Sbjct: 153 VLGSYVYDDKSDIFAREPFVAQFSLPSKVLPKLALVPLHTTPKDVATELDALYRVFLNVS 212 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 ++ GDFN + L + + ++ + Sbjct: 213 QHW-------------QSEDVMLLGDFNADCSSLSKKRQGELVLRTKPGFLWVIQDGEDT 259 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + I + + + + + ++ +SDH P+ ++ + Sbjct: 260 TVRDSTHCTYDRI--VIHGERCQGLVKWAAAFNFPRSFQLTETEALNISDHYPVEVELN 316 >gi|327287972|ref|XP_003228702.1| PREDICTED: LOW QUALITY PROTEIN: deoxyribonuclease-1-like [Anolis carolinensis] Length = 307 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 95/304 (31%), Gaps = 37/304 (12%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 +VL L F+ P A +R+ ++NI T +S + L+ Q Sbjct: 5 WVLGLAAFVRPSLA-----LRVSAFNIQTFG---------DSKLSNDTITDLIVQIVSGY 50 Query: 65 DADIVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 DI +QE+ + AV K+ + + +++ S+ R+ Sbjct: 51 --DITLVQEVRDADLSAVKKLMHRLNQASAHPFSYVVSKPLGRSSYKEQYLFIYRQDQAS 108 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSC 181 +L Y G + + +R + ++ ++ + L + + + Sbjct: 109 LLDSYYFDDGCEPCGNDTFSREPFVVRFAAPQTELGELVLVPLHA-----APNDAVLEID 163 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 +L W ++ GDFN +++ D + + + + Sbjct: 164 ALYDVYLDVKHRW------GTQDVLLLGDFNAGCSFVRAQDWAHIRLRTDPAFQWLIPDT 217 Query: 242 DSRCNANKNLRNKIPIDYFV-MDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPI 298 + D V + + L+ S + E S L SDH P+ Sbjct: 218 ADTTAGRSDCAY----DRIVAVGAHLQGGLLPGSAQVNNFQETFRLSYKDALAVSDHYPV 273 Query: 299 SIDY 302 + Sbjct: 274 EVTL 277 >gi|254430067|ref|ZP_05043774.1| endonuclease/exonuclease/phosphatase family [Alcanivorax sp. DG881] gi|196196236|gb|EDX91195.1| endonuclease/exonuclease/phosphatase family [Alcanivorax sp. DG881] Length = 300 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 36/292 (12%), Positives = 82/292 (28%), Gaps = 60/292 (20%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQYAKNLDADIVFLQE 73 V+L+S+NI + + R+ + + + D+V LQE Sbjct: 40 PDTVKLMSFNIQAGIGSQKFGDYITGSWKHLVAHPRSVETIEQIAEVLSHF--DVVGLQE 97 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVLQQSYPL 130 + + ++ + + + + + R + + P Sbjct: 98 VDGGSLRSRNMNQLVHLASMADFPFWHQQLNRNLGRLGQFSNGFLSRHQPFEITDHRLPG 157 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 L R A+ + + + V+ HL + + Q + Sbjct: 158 LPG---------RGAIVIKYGHPIQPLVVVVAHLALG-------------EKVRNTQLSY 195 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 L + K V+ GDFN ++ +L + + + + N + Sbjct: 196 LARLLADYK----YVVMMGDFNCRLTHLD---------NSPLAALGLQTVQADNLNTYPS 242 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ ++ + LSDH P++ + Sbjct: 243 WAPDRHIDHILLSPDLESR-------------HTRVLTDCLLSDHLPLATEI 281 >gi|126444014|ref|YP_001062967.1| metal-dependent hydrolase [Burkholderia pseudomallei 668] gi|126223505|gb|ABN87010.1| metal-dependent hydrolase [Burkholderia pseudomallei 668] Length = 338 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 75/285 (26%), Gaps = 56/285 (19%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 +++R+ ++NI+ T S + L AD++ LQE+ Sbjct: 47 QPRTRELRIATYNIHG-----------GLGAWTASAAERIAVVLDELRADVIALQEVPLG 95 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A + T AV + + L SF Sbjct: 96 GARGADV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----SF 147 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R A++ +E + V+ HL S + S Q L + Sbjct: 148 GNREPRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LAA 191 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 +P ++ GD N + F + + F + R + Sbjct: 192 FDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS--L 240 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D + ++L+ + DH P+ Sbjct: 241 DRIWVHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 275 >gi|269958811|ref|YP_003328599.1| exodeoxyribonuclease 3 [Anaplasma centrale str. Israel] gi|269848641|gb|ACZ49285.1| exodeoxyribonuclease 3 [Anaplasma centrale str. Israel] Length = 295 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 84/312 (26%), Gaps = 74/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++WN+N LR DI LQE + Sbjct: 10 IRILTWNVN----------------SIRKRVDHLRSVLSEHRIDIALLQETKCTDD---- 49 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ K + + + + + S A + Sbjct: 50 ------QFPLAELESLGYKCYIHGQKSRNGVAILSKYPIIGEVCNTIFDSAEGISAAQDT 103 Query: 144 RAVELL--------VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + + V+ KI V +++ + +D+ Y + + LK + Sbjct: 104 GSYSVTEARYLECLVDCREVKIRVASVYVPNGQEVDTETFVYKLNF------LRSLKARM 157 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN----------------DSLIRFPK 239 + E V+ GD+N + D + +D + Sbjct: 158 LKLLEGEEWIVVGGDYNVAPECMDVYDA--QALDGKLCFHPEERARLRAILYSGFTDAFR 215 Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + ID+ ++ NA L++ + + Sbjct: 216 VLHGGKQEFSWWNYREGSWQRNRGMRIDHILLSPNAVDRLVKC-------DILSSIRGLE 268 Query: 291 RLSDHCPISIDY 302 SDH P+ Sbjct: 269 SPSDHAPVVCIL 280 >gi|225864161|ref|YP_002749539.1| putative secreted protein [Bacillus cereus 03BB102] gi|225789553|gb|ACO29770.1| putative secreted protein [Bacillus cereus 03BB102] Length = 264 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 40/292 (13%), Positives = 88/292 (30%), Gaps = 42/292 (14%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + +R+ ++NI + + +++ I+ LQE+ S + Sbjct: 5 SDILRIATFNIWN------------HESLWFERLEAICEEIRSISPHILALQEVRSSVNL 52 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + ++ + +A K + +++ ++S Sbjct: 53 NSKKNVAQY--IAGQIGYPFCIFKEYPDSPDEGLAFLSKIPIIAEEAIWETDIEESNYC- 109 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 A+ + G K V ++HL S + +Q + +WI + Sbjct: 110 ----AIRITFTYKGCKFGVTNVHLNW------------KSSRIRQEQMNTVNNWIENRAS 153 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE--KDSRCNANKNLRNKI--- 255 ++ GDFN + + K + + KN K Sbjct: 154 DYE--LLCGDFNDDPFSMVHQYLIRKHWIDVAQFKEIEENMIAQPTLDYRKNPNLKDDVK 211 Query: 256 ---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D+ ++ Q F + ++ E + S G SDH + +D F Sbjct: 212 QEKRYDWIMI-QENTAFEFPTIENVSIFGESALTSTGMFPSDHYGVFVDLKF 262 >gi|153834957|ref|ZP_01987624.1| nuclease [Vibrio harveyi HY01] gi|148868587|gb|EDL67675.1| nuclease [Vibrio harveyi HY01] Length = 982 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 45/382 (11%), Positives = 94/382 (24%), Gaps = 96/382 (25%) Query: 16 CTASVAQKVRLVSWNINTLSEQ--EGVSLWKNSVKRTTSDYT-------LLRQYAKNLDA 66 A +R+ S+N+ + R ++ + +DA Sbjct: 467 APAIADSDLRIASFNVLNYFNSVADSGHENPTGQNRGATNLDEFLIQQAKIVAAMNKMDA 526 Query: 67 DIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIHT 112 DI+ L E+ + +AV + ++ + ++ + ++ I Sbjct: 527 DIIGLMEVENNGFGDSSAVKNLVDALNAEIEDTEDHYTYVEIADQDKYQDEYFGSDAIMV 586 Query: 113 AIAVRKK--------NVRVLQQSYPLLGAKDSFSRAGNRRAVE----------LLVEING 154 AI R V V + + A A + V+ G Sbjct: 587 AILYRANEVTPKEAAKVIVTPEQHIEENTITRGDDAEGNPAYDKYQRHSLLQTFTVKETG 646 Query: 155 KKIWVLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 K + V+ H KS + + A + D + + Sbjct: 647 KDLSVVVNHFKSKGSECIEEWIAGVEDSEPADLQGNCNNFRVSAANVVGDALKGIEGD-- 704 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPN-------------DSLI 235 ++ GD N + TI Sbjct: 705 -VLVMGDLNAYGMEDPLLTLTDYSKEKYGRDIYTAAYTTIGGGELQVEKTKIEKGYGYHN 763 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 + + +D+ + + + ++ I E ++ + Sbjct: 764 LNTVLHGADTFSYTYSGELGNLDHALASNSLAQKVVAIEDWHINSLESNLFEYSSKYTGD 823 Query: 292 ---------LSDHCPISIDYDF 304 SDH P+ I DF Sbjct: 824 MPKYKDAFSASDHDPVIIAIDF 845 >gi|229020312|ref|ZP_04177079.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273] gi|229026537|ref|ZP_04182888.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272] gi|228734763|gb|EEL85406.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272] gi|228740984|gb|EEL91215.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273] Length = 353 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 47/322 (14%), Positives = 106/322 (32%), Gaps = 64/322 (19%) Query: 21 AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++ ++NI G +S ++T + + + +N ++D LQ Sbjct: 53 GNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKKMLSFLQNENSDFTLLQ 112 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVRKK 119 E+ + + F N S + + ++ K Sbjct: 113 EVDIKS--HRSFDVNEHEFLKKGLPNYASSFGKNYDTRWVPVPVTKPMGYAEGGLSTFSK 170 Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENT 176 + L G + R + R VE + + NGK + +++IHL + Sbjct: 171 YTVQTATRFQLPGMEPWPKRLFDLDRAIVEHKIPVDNGKYVRLVNIHLSA---------- 220 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 Y + QQA++LK+++ + ++ ++ GD+N+ ++ +D + P + Sbjct: 221 YDEGGKIRKQQAEYLKEYMNKCYQNGDYVILGGDWNQLLSNAQLSDPKFVKERPEWLVEL 280 Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280 D + ID F++ N ++ ++ + Sbjct: 281 PKDFADGGFQWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 338 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 SDH P+S + Sbjct: 339 EN----------SDHNPVSAVF 350 >gi|163757409|ref|ZP_02164498.1| putative exodeoxyribonuclease iii protein [Hoeflea phototrophica DFL-43] gi|162284911|gb|EDQ35193.1| putative exodeoxyribonuclease iii protein [Hoeflea phototrophica DFL-43] Length = 270 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 33/308 (10%), Positives = 82/308 (26%), Gaps = 67/308 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +WNIN L++ + + D++ LQE N Sbjct: 3 FSVTTWNIN----------------SVRLRLPLVQHLLETVQPDVLCLQETKCPN---DA 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + ++ + +A+ + Q G D+ R Sbjct: 44 FPSAAFR------KIGYEHMAIHGQKGYHGVAILSRLPLSDDQRLSYCGIADA------R 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK-ESL 202 ++ ++I + + ++ + D +P + ++ + + + Sbjct: 92 HVSAVVEAPGERRIRLHNFYVPAG--GDEPNRDINPKFGHKLDFIEEMRGLHAESELKDG 149 Query: 203 VPFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCN 246 + ++ GD N + ++ K + + Sbjct: 150 ISSILVGDLNIAPLETDVWSHKQLLKVVSHTPVETENLTGMQQGGAWVDLIRTHIPPEEK 209 Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ + L + +R SDH Sbjct: 210 VFTWWSYRAKDWAAADRGRRLDHVWSSADLADGLSK-------IEVLREARGWERPSDHV 262 Query: 297 PISIDYDF 304 P++ +DF Sbjct: 263 PVTAHFDF 270 >gi|222475141|ref|YP_002563557.1| exodeoxyribonuclease III (xthA2) [Anaplasma marginale str. Florida] gi|222419278|gb|ACM49301.1| exodeoxyribonuclease III (xthA2) [Anaplasma marginale str. Florida] Length = 315 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 40/326 (12%), Positives = 84/326 (25%), Gaps = 76/326 (23%) Query: 11 FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + + +R+++WN+N L DI Sbjct: 28 LIPLMISGVSGRMIRILTWNVN----------------SVRKRVAHLCSVLTEHHVDIAL 71 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV------- 123 LQE + + + + +A+ K V Sbjct: 72 LQETKCTDD----------QFPLAELEDLGYKCYIHGQKSRNGVAILSKYPIVGELCNTV 121 Query: 124 --LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 ++ + S+S R +E LV+ K+ V +++ + +D+ Y + Sbjct: 122 FDAEEEIGTVQDTGSYSVTEARY-LECLVDYQDVKVRVASVYVPNGQEVDTETFVYKLNF 180 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP----------- 230 + VI GD+N + + D + +D Sbjct: 181 LRCLKARLLKLLAREDW------LVIGGDYNVAPDDIDVYDA--QALDGKLCFHPKERAG 232 Query: 231 -----NDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFS 276 + + + ID+ ++ NA L++ S Sbjct: 233 LREILHLGFTDAFRILHEGKQEFSWWNYREGSWQRNRGMRIDHLLLSPNAVDKLVECSI- 291 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P+ Sbjct: 292 ------LSSVRGLESPSDHAPVMCVL 311 >gi|196005147|ref|XP_002112440.1| hypothetical protein TRIADDRAFT_25141 [Trichoplax adhaerens] gi|190584481|gb|EDV24550.1| hypothetical protein TRIADDRAFT_25141 [Trichoplax adhaerens] Length = 267 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 77/275 (28%), Gaps = 16/275 (5%) Query: 37 QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV-AKVFPKNTWCIFYST 95 E + +S L Q ADI+ L+E+ Y+ + + F+ Sbjct: 1 NENFIKCPQTALAWSSRKHSLMQEILRSKADIICLEEVDHYSDFFQPILTSLDYIGFFVP 60 Query: 96 ERLINH--SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153 + ++ D KK +L + L ++ +E Sbjct: 61 KPDSPCLLYDENNGPDGCALFFSAKKFSLILHDQFILRKNDGDTNQVAIVILLETTFLPE 120 Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR 213 KKI ++ HLKS S A L +P +I GDFN Sbjct: 121 SKKICIVCTHLKSHSSEWCENIRKEQS-------AFLLNKVGQLINFEYIPIIICGDFNT 173 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKF 269 N + + P + + R K IDY K Sbjct: 174 DPNTPTYTN--FANFQPCHLKSAYALNGEEPKFTTWKFRPKCQVCHTIDYIWFSDKFLKR 231 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + + SDH + ++ + Sbjct: 232 VQFLAIPTMSEIGPNALPAEHYPSDHMSLVAEFKY 266 >gi|184201443|ref|YP_001855650.1| putative exodeoxyribonuclease III [Kocuria rhizophila DC2201] gi|183581673|dbj|BAG30144.1| putative exodeoxyribonuclease [Kocuria rhizophila DC2201] Length = 279 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 34/311 (10%), Positives = 80/311 (25%), Gaps = 62/311 (19%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A Q VR+ + N+N + + + + D++ LQE+ + Sbjct: 2 AQSGQSVRIATVNVNGIRA---------------AYRRGMADWLAPRGVDLLCLQEVRAP 46 Query: 78 NAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + + + ++ W + ++ + A + + +G + Sbjct: 47 DKITRELLDEDVWDVQHTEAAAKGRAGVAIATRRD---AFDSALLPTAAR----VGIGEE 99 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + R + NG+ + ++ ++ S + + + L Sbjct: 100 YFDDSGRWIENDVTLPNGETLTLVSAYVHSGEVDTPKQTDKYRFMDAMLTRLPQLAQ--- 156 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKE 240 ++ GD N + F + + Sbjct: 157 ----GSDHALVVGDLNVGHTERDIKNWKGNVKNAGFLPEERAYFDRFFGDVGYVDVARSL 212 Query: 241 KDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + IDY + + D S R Sbjct: 213 AGDVPGPYTWWSYRGKAFDTDAGWRIDYHMATPGLAARARSATV-------DRAASYHVR 265 Query: 292 LSDHCPISIDY 302 SDH P+ +DY Sbjct: 266 FSDHAPLVVDY 276 >gi|301165660|emb|CBW25231.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteriovorax marinus SJ] Length = 256 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 39/284 (13%), Positives = 78/284 (27%), Gaps = 32/284 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ S NI + + + W LL + N D++ QE + + Sbjct: 2 LKVASTNIRFDNPADAPNDWAGRKS-------LLSELINNFAPDLLGTQEGREPQ-LKDL 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + ++ K++ + P SF A R Sbjct: 54 DQLLPAHTLIDGHRSWITERMYPCIFVNPLTVEVKESGDIWLSETPYEAGTKSFDSAFPR 113 Query: 144 RAVEL--LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + + K+ ++ HL Q Q L I + Sbjct: 114 LCTWIHGVFKDTKKEFIYVNTHLDHVKSH------------TRRSQIQVLISEIKKINTK 161 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN-LRNKIPIDYF 260 +P ++ GDFN + + D+ KE+++ + ID+ Sbjct: 162 SLPIILTGDFNESPAEDVREVINREWTNLYDAWQFLGKEEETSFHKFDGVHDEGSRIDWI 221 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + F SDH P+ + + Sbjct: 222 L---------TDRFFKTKSIEIIKEHREEIYPSDHFPVFASFTY 256 >gi|323342310|ref|ZP_08082542.1| exodeoxyribonuclease III [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463422|gb|EFY08616.1| exodeoxyribonuclease III [Erysipelothrix rhusiopathiae ATCC 19414] Length = 252 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 85/305 (27%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L D+ + + +D D++ LQE Sbjct: 2 MKLISWNVNGLRAV------------MKKDFEGI---FEAMDTDVLCLQETKMQAGQLDY 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ + + + ++ AV + + G ++ R Sbjct: 47 DPEGYYAYY-----------NYAEKKGYSGTAVYTRIKPLNVT----YGIQEDEHNTEGR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ +++ ++ + + + + L + Sbjct: 92 -----VITCEYDDFFLVCVYTPNSQPELKRIDYRMQWEDDFREYLKML--------DETK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + + + + F + + + Sbjct: 139 PVVLCGDLNVAHKEIDLKNPSANRKNPGFSDQEREQFTNLLDAGFIDSFRELHPNAIDRY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + + + + SDHCP+ Sbjct: 199 SWWSYRANARSRNTGWRIDYFVVSERLRNAIEAADILDQVL-----------GSDHCPVM 247 Query: 300 IDYDF 304 I +F Sbjct: 248 IKLNF 252 >gi|257082798|ref|ZP_05577159.1| predicted protein [Enterococcus faecalis E1Sol] gi|256990828|gb|EEU78130.1| predicted protein [Enterococcus faecalis E1Sol] Length = 278 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 41/287 (14%), Positives = 85/287 (29%), Gaps = 46/287 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+++ ++N+ V + + + + Q D + +QE+ Sbjct: 24 KMKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDL 76 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS---- 138 Y+T ++ + AI ++ V+ + Y L Sbjct: 77 KA--------YTTFTCLSAEREGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHP 128 Query: 139 -RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R A+ L + V+++HL + + ++ + L D I Sbjct: 129 EAGCPRIALWGLFKETTQNTPFLVINVHL--------DHISDHARLAGMTVILEELHDKI 180 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-PKEKDSRCNANKNLRNK 254 Q P ++ GDFN + + K D + + P+ K Sbjct: 181 AQY-----PTLLMGDFNAESGEAVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAEL 235 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + + + G+ SDH P+ + Sbjct: 236 EEIDYIYV----------KGWQVQKTASLTDSIDGRFPSDHFPLEAE 272 >gi|229147624|ref|ZP_04275968.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24] gi|296505509|ref|YP_003667209.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis BMB171] gi|228635833|gb|EEK92319.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24] gi|296326561|gb|ADH09489.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis BMB171] Length = 352 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 107/324 (33%), Gaps = 64/324 (19%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + ++ ++NI G +S ++T ++ + + +N ++D Sbjct: 50 ATGNDFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117 LQE+ + + F N S + + ++ Sbjct: 110 LQEVDIKSL--RSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTF 167 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLE 174 K + + L G + R + R VE + +N GK + ++++HL + Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA-------- 219 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 Y + QQ ++LK+++ + E+ ++ GD+N+ ++ +D + P + Sbjct: 220 --YDEGGKIRKQQVEYLKEYMNKHYENGDYVIMGGDWNQLVSNAQLSDPKFVKERPEWLV 277 Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278 D + ID F++ N ++ ++ Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 335 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P+S + Sbjct: 336 KFEN----------SDHNPVSAVF 349 >gi|227538193|ref|ZP_03968242.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum ATCC 33300] gi|227241962|gb|EEI91977.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum ATCC 33300] Length = 269 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 45/325 (13%), Positives = 93/325 (28%), Gaps = 77/325 (23%) Query: 1 MIR-KYVLALVFFLVPCTASVAQK------------VRLVSWNINTLSEQEGVSLWKNSV 47 M + K ++ F + A + K + ++++NI+ + + + Sbjct: 1 MNKLKILMLTCFVSIASLACSSDKKEIPEPKTEKSKLTVITYNIHHGAPENSEVV----- 55 Query: 48 KRTTSDYTLLRQYAKNLDADIVFLQEMGSY-------NAVAKVFPKNTWCIFYSTERLIN 100 + + K + D+V LQE+ + K+ ++S Sbjct: 56 -----NLENIANTIKQKNPDLVALQEVDVNVPRSGKVDQAKKLAELLNMNYYFSKSLD-- 108 Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWV 159 N +A+ K + L R +++ NGK + Sbjct: 109 ------YNGGEYGVAILSKFPISNTRRLELPMP----VAGEKRTVALATIDLGNGKMLEF 158 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL + QA +L + + P +I GD+N + N + Sbjct: 159 ASTHLDLNVPN-------------RTAQATFLNEL---SVQLNKPIMIGGDYNAESNSVE 202 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 + +N ID+ ++ A + S + Sbjct: 203 -------LTELRKQYTLSCVNGCPNSFPVRNPTK--AIDFVASNKLAVQQYSLLSAVALT 253 Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304 G SDH P+ Y++ Sbjct: 254 ---------GSYASDHLPVVAIYNY 269 >gi|110835509|ref|YP_694368.1| hypothetical protein ABO_2648 [Alcanivorax borkumensis SK2] gi|110648620|emb|CAL18096.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 300 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 38/291 (13%), Positives = 81/291 (27%), Gaps = 60/291 (20%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQYAKNLDADIVFLQEM 74 V+L+S+NI + + R+ + Q + D+V LQE+ Sbjct: 41 DTVKLMSFNIQAGIGSQKFGDYITGSWKHLVAHPRSVETIEQIAQVLSHF--DVVGLQEV 98 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHS---KRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + ++ + + + + R + + P L Sbjct: 99 DGGSLRSRNMNQLVHLASMAGFPVWHQQLNRNLGRFGQFSNGFLSRHQPFEITDHRLPGL 158 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 R A+ + + + V+ HL + + Q +L Sbjct: 159 PG---------RGAIVIKYGHPIQPLVVVVAHLALG-------------EKVRNTQLSYL 196 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 + K V+ GDFN ++N+L ++ + + N + Sbjct: 197 ARLLADYK----YVVVMGDFNCRLNHLDHSPLAALGLQ---------TVRADNLNTYPSW 243 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ ++ LSDH P++ + Sbjct: 244 APDRHIDHILLSPELESR-------------HTRVLSDCLLSDHLPLATEI 281 >gi|319652957|ref|ZP_08007062.1| exodeoxyribonuclease III [Bacillus sp. 2_A_57_CT2] gi|317395306|gb|EFV76039.1| exodeoxyribonuclease III [Bacillus sp. 2_A_57_CT2] Length = 251 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 85/304 (27%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N + Y K +DADI +QE ++ Sbjct: 1 MKLVSWNVNGIRACVKKGFM---------------DYFKEVDADIFCIQESKLQEGQIEL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ AV K + + G D+ + R Sbjct: 46 I-LEGYHQYWN----------YAIKKGYSGTAVFTKKEPLSVR----YGLGDNETEPEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + ++++++ + + + + L Sbjct: 91 I-----LTLEYEGFYLVNVYTPNSQRDLARLPYRLEWEERIREYLLGLDQI--------K 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + F + A Sbjct: 138 PVIMCGDLNVAHFEIDLKNAKSNRGNSGFTDEERGKMTRLLGSGFVDAFRYKYPEAEGAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ + + ++ SDHCP++ Sbjct: 198 TWWSYMAKVRERNIGWRIDYFIVSEKLKERILDSQIH-----------CDIMGSDHCPVA 246 Query: 300 IDYD 303 ++ + Sbjct: 247 LELE 250 >gi|229199222|ref|ZP_04325900.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293] gi|228584239|gb|EEK42379.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293] Length = 352 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 107/324 (33%), Gaps = 64/324 (19%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T + + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKEQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117 LQE+ + + F N S + + ++ Sbjct: 110 LQEVDIKSL--RSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTF 167 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLE 174 K + + L G + R + R VE + +N GK + ++++HL + Sbjct: 168 SKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA-------- 219 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 Y + QQ ++LK+++ + E ++ GD+N+ ++ + +D + P + Sbjct: 220 --YDEGGKIRKQQVEYLKEYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWLV 277 Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278 D + ID F++ N ++ ++ Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 335 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P+S + Sbjct: 336 KFEN----------SDHNPVSAVF 349 >gi|304320984|ref|YP_003854627.1| Exodeoxyribonuclease III [Parvularcula bermudensis HTCC2503] gi|303299886|gb|ADM09485.1| Exodeoxyribonuclease III [Parvularcula bermudensis HTCC2503] Length = 273 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 30/274 (10%), Positives = 71/274 (25%), Gaps = 44/274 (16%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 + + ++ + D+ LQE+ + + Sbjct: 12 KARLPRILEWFDDRQPDVTVLQEIKCVTDA----------FPAAPFEDRGYHVEVFGQKT 61 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 + +A+ K L F R L+ G + V ++L + Sbjct: 62 YNGVALLSKTPPEDV-----LRGVPGFDDDNARYIEALIPHDQGAPVRVGGLYLPNGNPA 116 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--------- 221 + Y + +D + GD+N + G Sbjct: 117 PGPKYDYKLA------WMAAFEDHARDLLAQEEAVCLLGDYNVIPDPSGVYAPDRWTEDA 170 Query: 222 ------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-------PIDYFVMDQNAYK 268 ++ + + + KD+ + + ID+ ++ A Sbjct: 171 LFRLETRKAFRRLLNLGYVDALAQVKDAPFYTFWDYQRGAWDKDHGLRIDHCLLSPQAAD 230 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 L + + + ++ + SDH P+ I Sbjct: 231 RLTGGDV-DRQVRDPALGNQDAKPSDHVPVWISI 263 >gi|126438983|ref|YP_001059231.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 668] gi|126218476|gb|ABN81982.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 668] Length = 286 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 85/308 (27%), Gaps = 52/308 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 +RL+SWN+ + G T D A+ L D D++ QE+ Sbjct: 1 MRLISWNVQWGRDANG-----------TVDLARTVDAARGLGDFDVLCAQELTRGFHALP 49 Query: 75 --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 S + A++ + + A+ + + L Sbjct: 50 GGPSGDQYAELAALLPGYAVFDAIGVDLPPLEPGAPRRQFGNALATRLPVERALRHALPW 109 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + + + R A+E+ + + V+ HL+ + + L ++A Sbjct: 110 PASAAAPSMPRCALEVTLRAPFGPLRVVVTHLEYYSA--QQRLAQVDALRRLHREAAAHA 167 Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF------ 237 + PF ++ GDFN D + + Sbjct: 168 RASAPPETPASPFAPSARAADAIVCGDFNSAYRSDAYRRFLAPFPDAPRFVDAWLSRHPG 227 Query: 238 --PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 P + + + D+ + + L + R SDH Sbjct: 228 KTPPMTAGVYDTAQWSEGPMTCDFAFVTDTLVRRLSRCEI-----------DGTVRASDH 276 Query: 296 CPISIDYD 303 PI ++ Sbjct: 277 QPIVLELS 284 >gi|53719141|ref|YP_108127.1| hypothetical protein BPSL1507 [Burkholderia pseudomallei K96243] gi|67639890|ref|ZP_00438719.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei GB8 horse 4] gi|124383859|ref|YP_001026065.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei NCTC 10229] gi|126449985|ref|YP_001080667.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei NCTC 10247] gi|126454152|ref|YP_001066498.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106a] gi|134277293|ref|ZP_01764008.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 305] gi|167002249|ref|ZP_02268039.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei PRL-20] gi|167845399|ref|ZP_02470907.1| endonuclease/exonuclease/phosphatase family superfamily protein [Burkholderia pseudomallei B7210] gi|167902390|ref|ZP_02489595.1| endonuclease/exonuclease/phosphatase family superfamily protein [Burkholderia pseudomallei NCTC 13177] gi|167910632|ref|ZP_02497723.1| endonuclease/exonuclease/phosphatase family superfamily protein [Burkholderia pseudomallei 112] gi|217421528|ref|ZP_03453032.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 576] gi|226197165|ref|ZP_03792742.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei Pakistan 9] gi|254178197|ref|ZP_04884852.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia mallei ATCC 10399] gi|254197468|ref|ZP_04903890.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei S13] gi|254199957|ref|ZP_04906323.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei FMH] gi|254206290|ref|ZP_04912642.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei JHU] gi|254297422|ref|ZP_04964875.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei 406e] gi|254358295|ref|ZP_04974568.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei 2002721280] gi|52209555|emb|CAH35508.1| conserved hypothetical protein [Burkholderia pseudomallei K96243] gi|124291879|gb|ABN01148.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia mallei NCTC 10229] gi|126227794|gb|ABN91334.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106a] gi|126242855|gb|ABO05948.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia mallei NCTC 10247] gi|134250943|gb|EBA51022.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 305] gi|147749553|gb|EDK56627.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei FMH] gi|147753733|gb|EDK60798.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei JHU] gi|148027422|gb|EDK85443.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei 2002721280] gi|157807264|gb|EDO84434.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei 406e] gi|160699236|gb|EDP89206.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia mallei ATCC 10399] gi|169654209|gb|EDS86902.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei S13] gi|217395270|gb|EEC35288.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 576] gi|225930544|gb|EEH26554.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei Pakistan 9] gi|238520501|gb|EEP83960.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei GB8 horse 4] gi|243062066|gb|EES44252.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei PRL-20] Length = 286 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 85/308 (27%), Gaps = 52/308 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 +RL+SWN+ + G T D A+ L D D++ QE+ Sbjct: 1 MRLISWNVQWGRDANG-----------TVDLARTVDAARGLGDFDVLCAQELTRGFHALP 49 Query: 75 --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 S + A++ + + A+ + + L Sbjct: 50 GGPSGDQYAELAALLPGYAVFDAIGVDLPPLEPGAPRRQFGNALATRLPVERALRHALPW 109 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + + + R A+E+ + + V+ HL+ + + L ++A Sbjct: 110 PASAAAPSMPRCALEVTLRAPFGPLRVVVTHLEYYSA--QQRLAQVDALRRLHREAAAHA 167 Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF------ 237 + PF ++ GDFN D + + Sbjct: 168 RASAPPETPASPFAPSARAADAIVCGDFNSAYRSDAYRRFLAPFPDAPRFVDAWLARHPG 227 Query: 238 --PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 P + + + D+ + + L + R SDH Sbjct: 228 KTPPMTAGVYDTAQWSEGPMTCDFAFVTDTLVRRLSRCEI-----------DGTVRASDH 276 Query: 296 CPISIDYD 303 PI ++ Sbjct: 277 QPIVLELS 284 >gi|293557096|ref|ZP_06675652.1| exodeoxyribonuclease III [Enterococcus faecium E1039] gi|293567361|ref|ZP_06678711.1| exodeoxyribonuclease III [Enterococcus faecium E1071] gi|291589963|gb|EFF21761.1| exodeoxyribonuclease III [Enterococcus faecium E1071] gi|291600740|gb|EFF31036.1| exodeoxyribonuclease III [Enterococcus faecium E1039] Length = 250 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 75/303 (24%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + + LDAD LQE A Sbjct: 1 MKFISWNVNGLRAIVNKNF---------------LEVFHELDADFFCLQETK-LQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + + D+ R Sbjct: 45 LDLPGYYQYWN----------YAERKGYSGTAIFAKKPALNATYGMGIDIHDTEGRL--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +++ + + + + L + Sbjct: 92 ------ITLEYSDFFLVTCYTPNSQSELKRLDYRLEWEEAFYNYLENL--------KKQK 137 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + N + F ++ Sbjct: 138 PVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERAALSRLLDNGFIDTFRYFYPTQEGVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ ++ L SDHCP+ Sbjct: 198 SWWNYRFNSRKNNAGWRIDYFLTSKDLEPRLADAKIHT-----------DIMGSDHCPVE 246 Query: 300 IDY 302 +D Sbjct: 247 LDL 249 >gi|88657831|ref|YP_507482.1| exodeoxyribonuclease III [Ehrlichia chaffeensis str. Arkansas] gi|88599288|gb|ABD44757.1| exodeoxyribonuclease III [Ehrlichia chaffeensis str. Arkansas] Length = 281 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 41/318 (12%), Positives = 86/318 (27%), Gaps = 78/318 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++ +WN+N L + N DI LQE+ + Sbjct: 2 TLKIATWNVN----------------SIRKRLDHLCNWLINSAIDIALLQEIKCTDE--- 42 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV-------------LQQSYP 129 + + + +A+ + V + Y Sbjct: 43 -------QFPFFDVESLGYKCYVHGQKARNGVAIITRYPIVGELVTSIFSSDYKSKLCYE 95 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 L ++ +R +E +V + KI + I++ + +DS + Sbjct: 96 LSSENFIYNCDESRY-LECVVLHHNIKIRIASIYVPNGQSIDS------DAFQYKLGFFD 148 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSL 234 L++ + ++ GD+N + D +++I N Sbjct: 149 QLREHALSLLKKEEILILGGDYNVAPYPIDVYDPEVMDGKLCFHKSEREKFRSI-LNLGF 207 Query: 235 IRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + + K ID ++ A L+ + L D Sbjct: 208 TDSFRVLNDYEKKFSWWNYKAGAWQQNRGLRIDNLLLSPQATDKLLSCVIHDKLRGLDT- 266 Query: 286 KSRGKRLSDHCPISIDYD 303 SDH P+ + D Sbjct: 267 ------PSDHAPVVCELD 278 >gi|37676369|ref|NP_936765.1| hypothetical protein VVA0709 [Vibrio vulnificus YJ016] gi|37200911|dbj|BAC96735.1| hypothetical protein [Vibrio vulnificus YJ016] Length = 322 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 52/318 (16%), Positives = 100/318 (31%), Gaps = 39/318 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + + S N+ G + + T L Q + +DAD+V QE+ S +A+ Sbjct: 2 ITIASCNLFNFLAPPGAYYEFSNILTDNEWNKKTTWLTQQLRAMDADVVAFQEVFSPDAL 61 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-------GA 133 + + ++ + + + AIA R + Sbjct: 62 NTLTSDLGYP-YFVCLDKPHVTDEFIYSKPVLAIASRWPVIESRLVRLKDCFGDYSENSD 120 Query: 134 KDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSL--------- 183 + ++ +R + ++E+ + V+ +HLKS + + Sbjct: 121 SVTDNKEFSRLPLHAVIELPIIGLCDVITLHLKSQRPTRWQTQQIDQADNTPPSDPVGSW 180 Query: 184 -----LSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP-----ND 232 +A L +I + P VI GDFN IN ++ P D Sbjct: 181 LSTVQRGWEAVLLSQYIKKIYASHARPMVIMGDFNANINSTELKPLIDESNTPLLKDVRD 240 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPI-DYFVMDQNAYKFLIQESFSEILYNEDD------I 285 L P D A ++ I DY ++ + + Q+ D Sbjct: 241 WLREQPIFTDEAQKATHYHGSQGLILDYLLLSEEFAQQNAQQRGKITHLVVWDKHLVNPS 300 Query: 286 KSRGKRLSDHCPISIDYD 303 + SDH +++ D Sbjct: 301 FEVDQFASDHAFVAVTID 318 >gi|331682296|ref|ZP_08382915.1| putative cytoplasmic protein [Escherichia coli H299] gi|331079927|gb|EGI51106.1| putative cytoplasmic protein [Escherichia coli H299] Length = 253 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 82/288 (28%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ NI+ LR + + ADIV LQE+ + V Sbjct: 9 SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P + F + + + + + H AV + S Sbjct: 59 LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A R + + GK I V+ +HL + Q L +W Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + P ++AGDFN + +D F + Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + LSDH P+S + Sbjct: 215 LQLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251 >gi|75908773|ref|YP_323069.1| exodeoxyribonuclease III [Anabaena variabilis ATCC 29413] gi|75702498|gb|ABA22174.1| Exodeoxyribonuclease III [Anabaena variabilis ATCC 29413] Length = 260 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 83/305 (27%), Gaps = 71/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N + + + K D++ LQE + Sbjct: 1 MKIATWNVN----------------SIRTRLEQVVDWLKQNPVDVLCLQETKVID----- 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS--YPLLGAKDSFSRAG 141 S + + S + +A+ + + P+L + Sbjct: 40 -----HDFPRSPFENLGYHSYISGQKAYNGVALISQQQLTDVTTGFTPILPDIEPIWDEQ 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R ++ + ++++++ + + S + Y + LK+++ Sbjct: 95 KRVITGVI-----DGVRIVNLYVPNGSAIASEKYEYK------LRWLTVLKEYLRSLLLL 143 Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246 I GDFN + + + + F K + Sbjct: 144 QPSICICGDFNIALEDKDIHEKVKAENHIMASPAERQALRDVLELGFADAFRKFTTEGGH 203 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ + Y+ D + + SDH P Sbjct: 204 -FSWWDYRAASFRRNQGWRIDHHYLTPVLYEQAKSCII-------DVSPRKLTQPSDHTP 255 Query: 298 ISIDY 302 + ++ Sbjct: 256 VIVEI 260 >gi|71002678|ref|XP_756020.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus fumigatus Af293] gi|66853658|gb|EAL93982.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus fumigatus Af293] gi|159130073|gb|EDP55187.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus fumigatus A1163] Length = 300 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 75/310 (24%), Gaps = 39/310 (12%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + +R+++ NI + R L +N DA + LQE+ Sbjct: 3 TTTELPLRILTHNIRY-ATSSPFKGELPWNDRKQPLLNELLFNTRNQDA-FICLQEVLHN 60 Query: 78 NAVAKVFPK--------------NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 V + W + + S ++ V Sbjct: 61 QLVDVLSGLKQPPSTIPKSASETQQWEYIGVGRDDGHKAGEYSPIFYQPSVWQLCHWESV 120 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 P +K + A R + N + VL ++ Sbjct: 121 WLSETPNKPSK-GWDAASIRILTIGVFTHNITRHTVLVMNTHL----------DDQGSQS 169 Query: 184 LSQQAQWLKDWITQKKESL-----VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF- 237 + A+ + I + + +AGDFN + N D+ Sbjct: 170 RFEAAKIILQKIDEYRSGKFGTLIAGVFLAGDFNSQETQEAYNVLTGSESSLVDTAKVVE 229 Query: 238 PKEKDSRCNANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 P + IDY ++ K + G LS Sbjct: 230 PSQHYGNYYTWTGFGYEGEDPTRIDYILIGPGKNKL--GSWIVNGYAVLANRFDSGVFLS 287 Query: 294 DHCPISIDYD 303 DH + D Sbjct: 288 DHRAVVADIT 297 >gi|319407783|emb|CBI81434.1| exodeoxyribonuclease III [Bartonella sp. 1-1C] Length = 272 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 82/305 (26%), Gaps = 68/305 (22%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + +WNIN + + QY D++ LQE+ +FP Sbjct: 5 IATWNIN----------------SIRLRLSQVLQYLDIFSVDMLCLQEIKCP---DDLFP 45 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + S + +A+ + + + +D Sbjct: 46 RQFFEAAGYQH------IALSGQKSYHGVAIISRLPFISVERRFFCQKEDCRH------- 92 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + +++E++G+KI + + ++ + D + + + + I + Sbjct: 93 LSVVIELHGRKIRIHNFYVPAG--GDEPDVNKNEKFRHKLDFLEEMSS-IRADHRDGLES 149 Query: 206 VIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNANK 249 ++ GD N + ++ K + + + Sbjct: 150 LLLGDLNIAPLPEDVWSHKQLLKVVSHTPIETERLQALCCEGGWVDLMRMKFPIPTKLYT 209 Query: 250 NLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +D+ N F + SDH P+ Sbjct: 210 WWSYRARDWALSDRGRRLDHIWSSPNLVPF-------VKELTIFRDTRGWPQPSDHVPVQ 262 Query: 300 IDYDF 304 +DF Sbjct: 263 TLFDF 267 >gi|313203809|ref|YP_004042466.1| endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes WB4] gi|312443125|gb|ADQ79481.1| Endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes WB4] Length = 313 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 45/289 (15%), Positives = 92/289 (31%), Gaps = 30/289 (10%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + ++++SWNI L + + ++ + D I+ QE S Sbjct: 34 TKPLKILSWNIYMLPYISLFNHNADRA-------RVIADKLEFSDYQIIVFQEAFSSKCR 86 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + + +K + + V K F Sbjct: 87 NILAKRLAKEY---PYQYGPANKCYWPFRTSSGLWVVSKMPLKQLAKIKFTEGS-GFDII 142 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW-ITQKK 199 + AV + G + +L HL++ S + ++Q + +K+ + + Sbjct: 143 ARKGAVLFQGDFEGTRFQLLATHLQAD-----------NSEKIRAKQCREIKEHLLNEFY 191 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF----PKEKDSRCNANKNLRNKI 255 +P +I GDFN +++ N T++ N+ LI ++ A K Sbjct: 192 NPNIPQLICGDFNIEMDDRVNYQRMLSTLEANNGLISGEVKCTYDEIDNNLARNAQGEKK 251 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY ++ I+ + LSDH + + F Sbjct: 252 VIDYILVRNEQLIHRIERKVHTFYARI---GEKSSNLSDHYAMEANIVF 297 >gi|163868656|ref|YP_001609865.1| exodeoxyribonuclease III [Bartonella tribocorum CIP 105476] gi|161018312|emb|CAK01870.1| exodeoxyribonuclease III [Bartonella tribocorum CIP 105476] Length = 260 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 45/302 (14%), Positives = 90/302 (29%), Gaps = 66/302 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNI + + L Q+ + DIV LQE+ S + + Sbjct: 1 MKIATWNIAG----------------IKARHETLYQWLQKSQPDIVCLQEIKS---IDES 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP++ + + +A+ K D +R Sbjct: 42 FPRD-------AIENLGYHIETHGQKSFNGVAILSKKTPDEVIRRLPGNDNDEQTRY--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + N + + ++L + ++S + +Y + + L Sbjct: 92 --IEAVYSTNKGVVRIASLYLPNGNPIESEKYSYK------MEWMERLYAHTKSLLAYEE 143 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGD+N L ++ I D+ + Sbjct: 144 PLVLAGDYNVIPTPLDAKKPQEWNQDALFLQKTRKAFQRILHLGLYDAIRNVTDTPSFSF 203 Query: 249 KNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + N I ID+ ++ A L I + + SDH P+ I Sbjct: 204 WDFQAGAWPKNNGIRIDHLLLSPEAVDRL-------ICAHSQTEVRGYPKPSDHVPVWIH 256 Query: 302 YD 303 + Sbjct: 257 LN 258 >gi|148284985|ref|YP_001249075.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Boryong] gi|146740424|emb|CAM80902.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Boryong] Length = 273 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 35/307 (11%), Positives = 83/307 (27%), Gaps = 68/307 (22%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++K+++++WNIN + L Q ++ DI+ LQE+ + Sbjct: 11 SRKLKILTWNIN----------------SIRARAYQLNQLIYDIQPDIILLQEIKCES-- 52 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 F ++ + + +A+ K + L +R Sbjct: 53 -------HNFPFQEINESHKYNFSINGQKSYNGVAILSKFPLEDIKFTFLGNPCPDQARF 105 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +E + V+ I++ + ++S + ++ K Sbjct: 106 -----IEANCLTEVGYVKVISIYVPNGGEVNS------DKFQIKLLFIDKFIKYLHSSKN 154 Query: 201 SLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRC 245 ++ GDFN + + ++ + + + Sbjct: 155 LGESIILGGDFNVAPYDNDVYSAIELQNTTCFTLPEKQYIRKLINHNFIDIYRLFHQRQK 214 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + IDY + + D R SDH Sbjct: 215 K-FTWWDYRAGAFERNLGMRIDYILCTISIALKATDCYI-------DYHTRNNHRASDHA 266 Query: 297 PISIDYD 303 P+ ++ Sbjct: 267 PVIASFE 273 >gi|146297800|ref|YP_001192391.1| endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae UW101] gi|146152218|gb|ABQ03072.1| Endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae UW101] Length = 269 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 97/308 (31%), Gaps = 49/308 (15%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++ + FL+ + +Q + +SWN+ + + + + + Sbjct: 1 MKNSTFYFLLFLLTSFQAFSQT-KFISWNLENFG-----------KSKYQASLSFIAKTV 48 Query: 62 KNLDADIVFLQEM----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + DI+ +QE+ G AVAK+ + + + +S A + Sbjct: 49 QEY--DIIAIQEVVAGYGGSQAVAKLASILNEKGSKWDYTISDPTSGNSYKKERYAFIWK 106 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 V++ + + + +R E+N K + ++ H + E Y Sbjct: 107 TSKVKLKGK----PWLEKKYHLEIDREPYFATFEVNKKLVTFVNFHAITKSKQPETEIKY 162 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL---GNNDDFWKTIDPNDSL 234 ++ + V GDFN ++ + ++ Sbjct: 163 FKFLP---------------QEYPDLNLVFTGDFNCPESHTVFNPLKKMGYVSVFQKQKT 207 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 K K C A++ D N K + + YN D +++SD Sbjct: 208 TLKQKCKAEVCLASEF-------DNIFYKSNTLKPIKSG--VVLFYNNYDSLQEARKISD 258 Query: 295 HCPISIDY 302 H PI ++ Sbjct: 259 HIPIWFEF 266 >gi|21903354|gb|AAG28792.2| epithelial lens deoxyribonuclease I [Bos taurus] Length = 272 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 39/284 (13%), Positives = 90/284 (31%), Gaps = 30/284 (10%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA--K 82 ++ ++NI T E + + + + + DIV +QE+ + VA K Sbjct: 14 KIAAFNIRTFGET---------KMSNATLASYIVRIVRRY--DIVLIQEVRDSHLVAVGK 62 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + +++ ++ R V VL G + + + + Sbjct: 63 LLDYLNQDDPNTYHYVVSEPLGRNSYKERYLFLFRPNKVSVLDTYQYDDGCESCGNDSFS 122 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + K+ I D++ S L Q +W + Sbjct: 123 REPAVVKXSSHSTKVKEFAIVALHSAPSDAVAEINSLYDVYLDVQQKWHLN--------- 173 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 ++ GDFN +Y+ ++ + + + + + N D V+ Sbjct: 174 -DVMLMGDFNADCSYVTSSQWSSIRLRTSSTFQWLIPDSADTTATSTNCAY----DRIVV 228 Query: 263 DQNAYKF-LIQESFSEILYNEDDIKSR--GKRLSDHCPISIDYD 303 + + ++ S + + S +SDH P+ + Sbjct: 229 AGSLLQSSVVPGSAAPFDFQAAYGLSNEMALAISDHYPVEVTLT 272 >gi|330943652|gb|EGH45968.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. pisi str. 1704B] Length = 245 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 84/287 (29%), Gaps = 51/287 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAV 80 + +++ N++ LR+ + + ADIVFLQE+ + Sbjct: 3 SLNVLTMNMHMGFGIFNRRF----------ILPELREAVRTVSADIVFLQEVHGEQQSHA 52 Query: 81 AKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 KV T + S + + D A+ K + ++ + S Sbjct: 53 RKVKDWPTISQYEFLADSMWSDFAYGRNAVYPDGDHGNALLSKYPIIQHENLDI-----S 107 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R + ++E+ V + + S QQ + L + + Sbjct: 108 IHGTEQRGLLHCILEVPHAG-RVHAVCVHLGLR-----------ESHRRQQLKLLNELMA 155 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + P ++AGDFN ++ + F + + + + Sbjct: 156 R-IPEGEPVIVAGDFNDW------RRRADASLQGSGLHEVFVERFGAPAKSFPARWPLLC 208 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D + S LSDH P++++ Sbjct: 209 LDRIYVRNATSHRPKVLS-----------SRPWSHLSDHAPLAVELT 244 >gi|313159540|gb|EFR58903.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 274 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 90/303 (29%), Gaps = 45/303 (14%) Query: 2 IRKYVL---ALVFFLVPCTASVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 I KY+L AL+ ++P ++ AQ V+L + WNI + + + + Sbjct: 3 INKYILGAGALLCMMLPAASAQAQDVKLKCMEWNIKSFEYDDNSNAVYF-------EIAE 55 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + K + DIV E + K T S + ++ + Sbjct: 56 AMEKIKAENPDIVCFNEFETATGRMSSVEKLT-ECAQSLGMFPFFVFSYNKDNGAYGNGI 114 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 K V S L + R+ + + + + + V + F Sbjct: 115 LSKYPIVNSASVLLGMYTGADQRSAGWADILVPTDSKPEGVKVRIVCTHLDAFGGD---- 170 Query: 177 YSPSCSLLSQQAQWLKDW-ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 QA+ + + I +P +I GD N + + Sbjct: 171 -----ETCLGQAKEVIEHAIAPAVAENIPVLIMGDMNCGPSSSAIRE------------- 212 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + K CN + +DY + K+ + R +SDH Sbjct: 213 -YEKTGTRLCNNDGTFGGYSKLDY-FISFPQGKWSCSDYKVVK-------GDRLNVISDH 263 Query: 296 CPI 298 PI Sbjct: 264 YPI 266 >gi|114765837|ref|ZP_01444930.1| exodeoxyribonuclease III, putative [Pelagibaca bermudensis HTCC2601] gi|114541836|gb|EAU44873.1| exodeoxyribonuclease III, putative [Roseovarius sp. HTCC2601] Length = 262 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 32/307 (10%), Positives = 71/307 (23%), Gaps = 73/307 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L +WNIN L+ + D++ LQE S Sbjct: 2 PFTLATWNIN----------------SVRLREALVCKLLTEEAPDVLCLQECKS------ 39 Query: 83 VFPKNTWCIFYSTERLINHSKR-DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 I R + + + +A+ K + G + Sbjct: 40 ----PVEKIPMEAFRALGYGHVVARGQKGYNGVAILSKLPMRDMGDHDFAGLGHARH--- 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 V +E + V + ++ + D + + ++DW + Sbjct: 93 ----VAAELENG---VTVQNFYVPAG--GDVPDREVNEKFGQKLDYLAEMRDWFRAEAPK 143 Query: 202 LVPFVIAGDFNRKINYLG--NNDDFWKTID-------------PNDSLIRFPKEKDSRCN 246 ++ GD N ++ K + + ++ Sbjct: 144 KS--ILVGDLNIAPREDDVWSHKQLLKVVSHTPVEVEALAETQEAGGWVDITRKDIPEGQ 201 Query: 247 ANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ + ++ SDH Sbjct: 202 LYSWWSYRARDWDAADKGRRLDHVWATPDIASAGHSS-------RVLRDARGWEKPSDHA 254 Query: 297 PISIDYD 303 P+ +D Sbjct: 255 PVFATFD 261 >gi|15890010|ref|NP_355691.1| exodeoxyribonuclease III [Agrobacterium tumefaciens str. C58] gi|15157983|gb|AAK88476.1| exodeoxyribonuclease III [Agrobacterium tumefaciens str. C58] Length = 267 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 32/308 (10%), Positives = 76/308 (24%), Gaps = 68/308 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + +WNIN ++ Q+ DI+ LQE N Sbjct: 2 SFSITTWNIN----------------SVRLRMPIVEQFLVRYKPDILCLQETKCPNGEFP 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + P + + +A+ K G D+ Sbjct: 46 MKPLKALGYEHVIIH---------GQKGYHGVAIASKIPLTEDHRQDYCGIGDARH---- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + + ++ +++ + + ++ + D + + +P + +K + Sbjct: 93 ---ISAIFQVGSRRVRLHNFYVPAG--GDEPDRSINPKFGHKLDFIEEMKA-LRADGVPG 146 Query: 203 VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD N + + + + L Sbjct: 147 TSSILVGDLNIAPLENDVWSHKQLLKIVSHTPVETEGMLDIMKKGNWLDLMRLNVPETEK 206 Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ Q+ L + R SDH Sbjct: 207 IYTWWSYRAKDWEAANRGRRLDHIWSSQDLGSSLEK-------IEILREARGWNRPSDHV 259 Query: 297 PISIDYDF 304 P++ + F Sbjct: 260 PVTAHFRF 267 >gi|254786174|ref|YP_003073603.1| exonuclease III [Teredinibacter turnerae T7901] gi|237686598|gb|ACR13862.1| exodeoxyribonuclease III [Teredinibacter turnerae T7901] Length = 273 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 40/315 (12%), Positives = 82/315 (26%), Gaps = 80/315 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 + VS+N+N + L + + D + LQE + N Sbjct: 3 ITCVSFNVN----------------SIRTRLHQLEAVVEKYNPDFIGLQETKVADENFPR 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + H +A+ K+ + Q +D+ R Sbjct: 47 EDIERLGYHV------------EFLGQKTHYGVALMSKHPFLSVQKGFATDGEDAQKRF- 93 Query: 142 NRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + EI K + V++ F NT+ L+ +T + Sbjct: 94 ----IVGQFEIGADKPLTVMN-----GYFPQGESNTHPVKFPNKRNFYSDLQSLLTGQYS 144 Query: 201 SLVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPK 239 ++ GD N ++L ++ + K Sbjct: 145 PEDNLIVMGDMNISPQDIDIGIGEDNRKRWLRSGKCSFLPEEREWLDRLLCWGLHDTLRK 204 Query: 240 EKDSRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + + ID + Q + D Sbjct: 205 LQPEADDLYSWFDYRSRGYEREPRRGLRIDLILATQQLVEKCSNAGI-------DLEIRG 257 Query: 289 GKRLSDHCPISIDYD 303 ++ SDHCPI ++ Sbjct: 258 MEKPSDHCPIWAEFS 272 >gi|227874120|ref|ZP_03992326.1| exodeoxyribonuclease III [Oribacterium sinus F0268] gi|227840032|gb|EEJ50456.1| exodeoxyribonuclease III [Oribacterium sinus F0268] Length = 254 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 84/303 (27%), Gaps = 78/303 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +L+SWN+N L G + ++ K LDAD+ LQE Sbjct: 5 KLISWNVNGLRAVMGKNFMED---------------FKRLDADMFCLQETKLQEG-QIDL 48 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + +++ + ++ A+ K + Q + D R Sbjct: 49 DLPGYFQYWN----------YAVKKGYSGTAIFTKEEPLSVQYGIGVEEHDQEGR----- 93 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ + + +++ +++ + L+ P Sbjct: 94 ----VITLEYPEFYLITVYVPNSQGELKRLPYRMKFEDAFLNYILTLEK--------KKP 141 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + GD N + + + L F ++ Sbjct: 142 VIYCGDLNVAHEEIDLKNPDSNHMNAGFSDEERAKFSRVLDSGYLDSFRHFYPNKEEEYS 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYFV+ + K L+ S + + SDHCP+ I Sbjct: 202 WWSYRTKARDRNVGWRIDYFVVSKQLEKKLLSASIHQEV-----------MGSDHCPVEI 250 Query: 301 DYD 303 D Sbjct: 251 TLD 253 >gi|254384157|ref|ZP_04999501.1| large secreted protein [Streptomyces sp. Mg1] gi|194343046|gb|EDX24012.1| large secreted protein [Streptomyces sp. Mg1] Length = 613 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 40/330 (12%), Positives = 86/330 (26%), Gaps = 67/330 (20%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A A ++ + ++N+ L + + N K + D+V L+E+ Sbjct: 304 AQAANELAVATYNVENLDPTDPQEKFDNLAKAVVENLA---------SPDVVALEEIQDD 354 Query: 78 NAVAK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 N + + N + +I Sbjct: 355 NGAKNDGTVSAEQTLTKFTAAITAAGGPAYQW-RTVNPENNKDGGEPGGNIRQVFLFNPA 413 Query: 120 NVRVLQQS---------------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 V +++ P + + A +R+ + GK ++ Sbjct: 414 RVSFTERAPGDAATATGVVKEQGKAALTHSPGRIDPANPAWADSRKPLAGEFVFRGKTVF 473 Query: 159 VLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFN 212 V+ H S + L + + P S + QAQ + ++ + + + GD N Sbjct: 474 VIANHFGSKGGDEGLTSVHQPPVRSSETKRLLQAQAVNGFVKELLAADKNANVIALGDIN 533 Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 N D + + N +D + F Sbjct: 534 DFEFSATANALA----DGGALYPAIKSLPKAERYSYVYQGNAQVLDQILTSPAIKTFTYD 589 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + SDH P + + Sbjct: 590 SVHINAEFSAQN--------SDHDPQVLRF 611 >gi|163756803|ref|ZP_02163912.1| endonuclease/exonuclease/phosphatase family protein [Kordia algicida OT-1] gi|161323192|gb|EDP94532.1| endonuclease/exonuclease/phosphatase family protein [Kordia algicida OT-1] Length = 344 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 47/325 (14%), Positives = 90/325 (27%), Gaps = 72/325 (22%) Query: 2 IRKYVLALVFFLV-------------PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK 48 R+++L+ ++ TA + ++S+N+ + N +K Sbjct: 69 RRQFLLSFFVLIIGYSHVTSLYKFSRNTTAPSQNSISVMSYNVRLFN-------IYNWIK 121 Query: 49 RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108 T D + D+V QE F T+ Sbjct: 122 ETHVD-KKIVDLVHADFPDVVAFQEFHKNQ--QAAFNFYTYKHVVLK-----------GK 167 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 + T A+ K V + S ++ A+ + + N I V ++HL+S Sbjct: 168 NKKTGQAIFSKYPIVHKGSLEFPNTPNN--------AIYIDIVKNKDTIRVYNLHLQSLR 219 Query: 169 FLDSLENTYSPS--------CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 E + Q + + +K +I GDFN Sbjct: 220 INPQKEELTQENSERLLKRMAKTFKMQQSQAELFEINRKNCTYKKIILGDFNNSQFSNVY 279 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 F + + ID+ ++D++ + Sbjct: 280 KTIKGSM------KDAFVEAGSGFGKTLDYPFFPMRIDFVLVDES--------------F 319 Query: 281 NEDDIKSRGKRLSDHCPI--SIDYD 303 + K+ + SDH I I D Sbjct: 320 TVNKFKTFTEHYSDHYAIQSVISLD 344 >gi|325268539|ref|ZP_08135169.1| AP endonuclease domain protein [Prevotella multiformis DSM 16608] gi|324989067|gb|EGC21020.1| AP endonuclease domain protein [Prevotella multiformis DSM 16608] Length = 366 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 45/302 (14%), Positives = 86/302 (28%), Gaps = 69/302 (22%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAV 80 ++++S+N+ S +N + Y ADIV LQE Sbjct: 99 GSIKVLSYNVFMFSTWSEPGGEQNP----------IVDYILKSKADIVCLQEAQADVEGT 148 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +++P Y + D + + + + Q S P + Sbjct: 149 DRIYPALKKHYPYFRLMVKKKPGADH-------MVLLSRYPVLWQDSIPYGSGSNQS--- 198 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFC--------------FLDSLENTYSPSC----- 181 V LV+I G K V++ H +S + + S Sbjct: 199 -----VAYLVDIKGTKTLVVNNHFESNGLSTGDKENFKTLVKGDMDTHDARNESFHLLRK 253 Query: 182 -----SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + + QA + ++ + + VP ++ GDFN + + + Sbjct: 254 LGEVSARRAPQAVAVARYVRKYLDRKVPVILCGDFNDSP-LSYTHRTIARELTD-----C 307 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + + ID+ + F DD SDH Sbjct: 308 YVASGNGPGISYHRSGMYFRIDHIFCSDD---------FEPYGAKVDDSAET----SDHY 354 Query: 297 PI 298 P+ Sbjct: 355 PV 356 >gi|325109290|ref|YP_004270358.1| endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM 5305] gi|324969558|gb|ADY60336.1| Endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM 5305] Length = 247 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 38/281 (13%), Positives = 78/281 (27%), Gaps = 49/281 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL+S+NI + +R ++ ++ + DI+ LQE+ + Sbjct: 1 MRLLSYNIQ--------KGYGGRDRRY--NFERTIAAIEHENPDIIVLQEVDHNERRTRF 50 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + Y ++ + + + L R Sbjct: 51 DNQPEILSDYFRYEATDYQFNHRVSKGGYGNLLISRFPFHSVTQVCL-----KLKHRKKR 105 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A ++V+ K+ ++ HL Q L D + + + Sbjct: 106 GAQVVVVDSPEGKLLLVGWHLGLK-------------EKQRHAQVNHLLDHVDLQDNLDL 152 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK--IPIDYFV 261 P +I GDFN D D + F + +D Sbjct: 153 PTLIVGDFN---------DWRNTLADGPFAKHGFEQLTRPPSRYRTFPAYLPIGSLDKAF 203 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ +++ K SDH P+ +D+ Sbjct: 204 CRGPINVRDVRVVRNQLT----------KEASDHLPLLVDF 234 >gi|260769666|ref|ZP_05878599.1| hypothetical protein VFA_002724 [Vibrio furnissii CIP 102972] gi|260615004|gb|EEX40190.1| hypothetical protein VFA_002724 [Vibrio furnissii CIP 102972] Length = 322 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 91/315 (28%), Gaps = 37/315 (11%) Query: 23 KVRLVSWNI-NTLSEQEGVSLWKNS--VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +VR + N+ N L+ + N + L Q L+AD++ QE+ S +A Sbjct: 2 QVRFATANLFNYLAPPNAFYEFNNIYEQTQWQQKQRWLSQKLTALNADVIGFQEVFSPHA 61 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + ++ + S + IA R V L F R Sbjct: 62 LRDQVAALGYP-YFEVIDTPHVSDDYIYSSPVVGIASRFPLSEVAAVETSL--DGFHFHR 118 Query: 140 AGNRRAV----------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 R + ++ + + + I S Q+A Sbjct: 119 KPLRATLNHPALGQVDVYVVHFKSQRPMLHEPIGDTLVDAWQQELQGRWQSAMQRGQEAH 178 Query: 190 WLKDWI-TQKKESLVPFVIAGDFNRKINY--------------LGNNDDFWKTIDPNDSL 234 L I +K++ P V+ GDFN+ ++ + Sbjct: 179 LLHQAIVQRKQQRQHPVVLMGDFNQVLSSMEFAALRATHRFRQPETCRPLIPYHLLDSWT 238 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI------KSR 288 + + R + +DY ++ + Y+ +D Sbjct: 239 LFSHSGDEQRQPTHYTGAAGQVLDYILLSSEFSRDADYPIALVSDYHVEDQHLINPHFDT 298 Query: 289 GKRLSDHCPISIDYD 303 + SDH +S+ + Sbjct: 299 DRFASDHALVSVTVE 313 >gi|156402949|ref|XP_001639852.1| predicted protein [Nematostella vectensis] gi|156226983|gb|EDO47789.1| predicted protein [Nematostella vectensis] Length = 419 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 75/307 (24%), Gaps = 44/307 (14%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + Q +R+++ N K+ + + + D+V LQE+ Sbjct: 5 AFVSGYKQNLRVLTLNCWG---------IPFISKQVKERFEHIAKELSTGKYDVVALQEV 55 Query: 75 GSYNA----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 + + K+ + +++ + + + S I + R L + + Sbjct: 56 WNKSDYAVMCDKLSSTLPYSLYFYSGVIGSGMCVFSRYRITNSFTYRFSLNGYLYKLWHG 115 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + A +++ K I HL + + QA Sbjct: 116 DWLAGTS-------AGYCVIDHPIKPIHFFVSHLHA-----EYNRQDDEYLAHRVTQAYQ 163 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 I + ++ GD N + L + L + + Sbjct: 164 FAQLIELITKPSDCVIVCGDMNSEPTDLCYRILCNLPGLTDTWLECNKEGYHGNTYGVSH 223 Query: 251 LRNKI---------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 IDY + + I SDH Sbjct: 224 NSFAGSTFQQAIQKGPSDGIRIDYIFYRGDRSNM----ELLDCHVTMSRIPWEEISYSDH 279 Query: 296 CPISIDY 302 + + Sbjct: 280 EGVLATF 286 >gi|329850335|ref|ZP_08265180.1| exodeoxyribonuclease III [Asticcacaulis biprosthecum C19] gi|328840650|gb|EGF90221.1| exodeoxyribonuclease III [Asticcacaulis biprosthecum C19] Length = 262 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 79/302 (26%), Gaps = 64/302 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N + LL ++ + D+ LQE+ + Sbjct: 1 MKLATWNVN----------------SVNARLPLLLEWFREAAPDVCALQEIKCIDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ +A+ K D SR Sbjct: 41 ------KFPIEAFESLGYNCAVFGQKTWNGVAILSKFPLSDVTKGLPGDDSDEQSRY--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E LVE + + + I+L + L + + Y + + L Q Sbjct: 92 --IEALVEAP-QPVRFVGIYLPNGNPLGTDKFAYK------LRWLERLHARAAQLLTLEE 142 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTI-----------DPNDSLIRFPKEKDSRCNANK 249 +I GDFN + N N Sbjct: 143 ATIITGDFNIIPTKADCWKESVWLDDALYQPAVRQAYQGLKNLGYTDAFDVMPPEGNRYT 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A L + I + + SDH P+ I Sbjct: 203 FWDYQAGAWQKNEGIRIDHHLLSPQAADRL---NGLVIHKDTRGRTHDEAKPSDHVPVEI 259 Query: 301 DY 302 + Sbjct: 260 EL 261 >gi|261208808|ref|ZP_05923245.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Enterococcus faecium TC 6] gi|289566402|ref|ZP_06446829.1| exodeoxyribonuclease III [Enterococcus faecium D344SRF] gi|294614472|ref|ZP_06694388.1| exodeoxyribonuclease III [Enterococcus faecium E1636] gi|260077310|gb|EEW65030.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Enterococcus faecium TC 6] gi|289161777|gb|EFD09650.1| exodeoxyribonuclease III [Enterococcus faecium D344SRF] gi|291592780|gb|EFF24373.1| exodeoxyribonuclease III [Enterococcus faecium E1636] Length = 250 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 75/303 (24%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + + LDAD LQE A Sbjct: 1 MKFISWNVNGLRAIVNKNF---------------LEVFHELDADFFCLQETK-LQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + + D+ R Sbjct: 45 LDLPGYYQYWN----------YAERKGYSGTAIFAKKPALNATYGMGIDIHDTEGRL--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +++ + + + + L + Sbjct: 92 ------ITLEYSDFFLVTCYTPNSQSELKRLDYRLEWEEAFYNYLENL--------KKQK 137 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + N + F ++ Sbjct: 138 PVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERAALSRLLDNGFIDTFRYFYPTQEGVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ ++ L SDHCP+ Sbjct: 198 SWWNYRFNSRKNNAGWRIDYFLTSKDLEPRLADAKIHT-----------DIMGSDHCPVE 246 Query: 300 IDY 302 +D Sbjct: 247 LDL 249 >gi|226952709|ref|ZP_03823173.1| endonuclease/exonuclease/phosphatase [Acinetobacter sp. ATCC 27244] gi|226836550|gb|EEH68933.1| endonuclease/exonuclease/phosphatase [Acinetobacter sp. ATCC 27244] Length = 821 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 45/320 (14%), Positives = 90/320 (28%), Gaps = 46/320 (14%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSYNAV 80 +R ++N+ N + + G + + + D + + +DADI L E+ + Sbjct: 467 IRAAAFNVLNYDNGKNGFPTERGATSQAEFDKQHRKIVSAMRAIDADIYGLMEIANNGFG 526 Query: 81 AKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + R + R + I AI K V+ + + L D Sbjct: 527 EDSAIAYLTRALGTDWRYVVPENLDRLGTDAIAVAIIYNSKRVKPVNKPVVL----DLGD 582 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCF--------LDSLENTYSPSCSLLSQQAQW 190 + A + + V+ HLKS ++ + + Sbjct: 583 KNRTTIAQTFQPISGKQMLTVIPNHLKSKSCSGVNAASLDADQKDGQGCWNPTRVKAVEQ 642 Query: 191 LKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 L W + ++ GD N + + L + + + Sbjct: 643 LIQWAAKNPTQVETPNILLLGDMNSYAKEDPI--LALEKANYKVLLNDKTIGQGEQAYSY 700 Query: 249 KN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------- 289 +D+ + D N Y + + I +E + Sbjct: 701 VFGVSSNAEGYGGAGNLDHAIADSNLYSKVKKAFAWHINADEPTVLDYNEEYKNDEQKAL 760 Query: 290 ------KRLSDHCPISIDYD 303 R SDH P+ +D D Sbjct: 761 FFAEDPYRSSDHDPVIVDID 780 >gi|115374765|ref|ZP_01462041.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca DW4/3-1] gi|115368242|gb|EAU67201.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca DW4/3-1] Length = 327 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 47/325 (14%), Positives = 91/325 (28%), Gaps = 60/325 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD--ADIVFLQEMGSYN-- 78 +R+VS+N+ KR + LD D+V LQE+ + + Sbjct: 9 PLRIVSYNVRYFGHALRGLASTQGPKR------RVSAALAALDPLPDVVCLQEVETSSFR 62 Query: 79 ---AVAKVFPKNTWC------------------IFYSTERLINHSKRDSNNDIHTAIAVR 117 A + P T + + +H K + T +A+ Sbjct: 63 SSVAERRKVPGETQLQAFMGRMEEIFAAQGREMPYDAFYFRAHHYKLGDFSLYTTGLAIL 122 Query: 118 KKNVRVLQQSYPLLGAKDSFS--------RAGNRRAVELLV--EINGKKIWVLDIHLKSF 167 + + + R +R + + +G+ V + HL Sbjct: 123 VNRRTLRVDRHNVDEPSQITHHHVQRLKERKQSRICAHMRLLRTSDGRPFHVFNTHLSLP 182 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFW 225 Q + + + PFV+ GDFN + Sbjct: 183 TPFAREFWATKDKMGCGVNQLHEARKLVALLTEHAQGEPFVVTGDFNSPPASP-----VF 237 Query: 226 KTIDPNDSLIRFP----KEKDSRCNANKNLRN---KIPIDYFVMDQNAYKFLIQESFSEI 278 + + L + S ++ +D+ + + ++L E Sbjct: 238 RYLCEEAQLTCAQAIVGQINPSAIRGFPTAGFMHLRMHLDH-LFSGSGVRWLD----MEE 292 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303 D+ SR LSDH P+ + Sbjct: 293 TRPFGDVGSRFHGLSDHMPLIARFT 317 >gi|28198769|ref|NP_779083.1| exodeoxyribonuclease III [Xylella fastidiosa Temecula1] gi|28056860|gb|AAO28732.1| exodeoxyribonuclease III [Xylella fastidiosa Temecula1] Length = 262 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 85/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ SWN+N+L+ + L+Q+ D++ LQE Sbjct: 1 MRIASWNVNSLN----------------VRLSQLQQWLVEAAPDVLGLQET--------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + +A+ + Q R Sbjct: 36 -KLEDHQFPEAALAALGYVSVYAGQKTYNGVALLARVALEDVQV------GIPEFEDVQR 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V+ I V+++++ + + + + Y S + W+ ++ + Sbjct: 89 RVIAATVD----GIRVVNLYVVNGQEVGTDKYAYKLS------WLDAVYHWLAEELQRYP 138 Query: 204 PFVIAGDFNRKINYLGNND-----------------DFWKTIDPNDSLIRFPKEKDSRCN 246 V+ GDFN + D K + L + Sbjct: 139 RLVVLGDFNIAPDARDVYDPQVWNEDHILTSTTERAALDKLLGLG--LHDGFRLHHQDAG 196 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID ++ + + D + +R SDH P Sbjct: 197 IFSWWDYRQASFRRNRGLRIDLTLVSEALRAQAVASGI-------DRVPRGWERPSDHAP 249 Query: 298 ISIDY 302 I+ Sbjct: 250 AWIEL 254 >gi|320163246|gb|EFW40145.1| hypothetical protein CAOG_00670 [Capsaspora owczarzaki ATCC 30864] Length = 1153 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 32/299 (10%), Positives = 75/299 (25%), Gaps = 55/299 (18%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + ++ +R+ S N + + D D++ QE Sbjct: 899 SASLLQSRILRVASLNTHM-----------GISANYQVQLDGIVTALLAEDVDVLGCQEF 947 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 +A W + ++ + + K + L Sbjct: 948 SRGLLMAGGIDMLAWLSARLDMPYVTYNPTYDTSG---GDILLSKFPFIASGRVALPSGV 1004 Query: 135 DSFSRAGNRRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 SR R + + I G K + ++ HL Q + Sbjct: 1005 SQQSR---RGMIWAALSIPGTTKPVTLVTTHLHH----------AERDHETRIAQLDAII 1051 Query: 193 DWIT-------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ + + V+ GD N + + + P+ + ++ Sbjct: 1052 SAVSSIPLPDSAQPPEIRRVVVFGDLNSVPGGPEAELAQSRGLVDSW-----PELEQAQG 1106 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + D+ + ++ I +SDH P+ ++F Sbjct: 1107 YTFHSRNPTQRFDWLLHSRDVTCKSISV--------------LDLTVSDHKPVVASFEF 1151 >gi|13472690|ref|NP_104257.1| hypothetical protein mll3063 [Mesorhizobium loti MAFF303099] gi|14023437|dbj|BAB50043.1| mll3063 [Mesorhizobium loti MAFF303099] Length = 302 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 45/328 (13%), Positives = 87/328 (26%), Gaps = 84/328 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 ++LVS+NI +G D + + ADI+ LQE+ Sbjct: 1 MKLVSYNIQYGFGSDG-----------RYDLSRAARIVD--GADIIALQEVERHWQRSRF 47 Query: 75 -GSYNAVAKVFPKNTWCI--FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 ++++ W + + R N V K V + + L Sbjct: 48 DDQPELLSRLLSGYHWVYGPAFDMDASERRDGRLINRRRQFGTMVLSKLPIVWSRLHALP 107 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + A+E ++ + VL +HL + +Q +L Sbjct: 108 MRRTLRPLNTRNAALECMIRTPAGPVRVLSLHLAH------------IAAEERLEQIDYL 155 Query: 192 KDWITQKKESLVPF------------------------VIAGDFNRKINYLGNNDDFWKT 227 + P+ + GDFN + +T Sbjct: 156 LAEHRRAPSEGGPWSGIDDEPSRNWTSGEIEPENPLAAIWMGDFNMEPGSAEYRRIVGRT 215 Query: 228 --------IDPNDSLIRFPKEKDSRCNANKN----LRNKIPIDYFVMDQNAYKFLIQESF 275 +D E + ++ K +D+ + + + Sbjct: 216 PYHRGAAYLDGFVDAAAVAIELAGDFHTHEKIIDGRLAKRRLDHCFVGGVFARRVRSV-- 273 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 G+ SDH P+ +D D Sbjct: 274 ---------RSDIGEMASDHFPVRVDID 292 >gi|69245045|ref|ZP_00603203.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Enterococcus faecium DO] gi|314939354|ref|ZP_07846596.1| exodeoxyribonuclease III [Enterococcus faecium TX0133a04] gi|314944126|ref|ZP_07850782.1| exodeoxyribonuclease III [Enterococcus faecium TX0133C] gi|314949042|ref|ZP_07852404.1| exodeoxyribonuclease III [Enterococcus faecium TX0082] gi|314953542|ref|ZP_07856453.1| exodeoxyribonuclease III [Enterococcus faecium TX0133A] gi|314994499|ref|ZP_07859775.1| exodeoxyribonuclease III [Enterococcus faecium TX0133B] gi|314998115|ref|ZP_07863002.1| exodeoxyribonuclease III [Enterococcus faecium TX0133a01] gi|68196046|gb|EAN10478.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Enterococcus faecium DO] gi|313587883|gb|EFR66728.1| exodeoxyribonuclease III [Enterococcus faecium TX0133a01] gi|313591110|gb|EFR69955.1| exodeoxyribonuclease III [Enterococcus faecium TX0133B] gi|313594421|gb|EFR73266.1| exodeoxyribonuclease III [Enterococcus faecium TX0133A] gi|313597294|gb|EFR76139.1| exodeoxyribonuclease III [Enterococcus faecium TX0133C] gi|313641358|gb|EFS05938.1| exodeoxyribonuclease III [Enterococcus faecium TX0133a04] gi|313644519|gb|EFS09099.1| exodeoxyribonuclease III [Enterococcus faecium TX0082] Length = 269 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 75/303 (24%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + + LDAD LQE A Sbjct: 20 LKFISWNVNGLRAIVNKNF---------------LEVFHELDADFFCLQETK-LQAGQID 63 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + + D+ R Sbjct: 64 LDLPGYYQYWN----------YAERKGYSGTAIFAKKPALNATYGMGIDIHDTEGRL--- 110 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +++ + + + + L + Sbjct: 111 ------ITLEYSDFFLVTCYTPNSQSELKRLDYRLEWEEAFYNYLENL--------KKQK 156 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + N + F ++ Sbjct: 157 PVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERAALSRLLDNGFIDTFRYFYPTQEGVY 216 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ ++ L SDHCP+ Sbjct: 217 SWWNYRFNSRKNNAGWRIDYFLTSKDLEPGLADAKIHT-----------DIMGSDHCPVE 265 Query: 300 IDY 302 +D Sbjct: 266 LDL 268 >gi|327537764|gb|EGF24469.1| endonuclease/exonuclease/phosphatase [Rhodopirellula baltica WH47] Length = 229 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 69/221 (31%), Gaps = 39/221 (17%) Query: 5 YVLALVFFLVPCTASVAQK--------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 A F++ + +AQ+ +R++S+NI+ +G D Sbjct: 24 IAFASFAFVLRSPSVLAQEPETNSTIRLRVLSYNIHHGRGTDG-----------KIDLDR 72 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L ++ D D+V +QE+ + + T +K+ + AV Sbjct: 73 LANVIRSADPDLVAVQEVDQDTRRNGMVN-QVETLAVQTSLHGKFAKQIDYDGGEYGQAV 131 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 K + + L G R + I+ ++ HL Sbjct: 132 LSKYPVESLEVHWLPGDPI----RERRIVGVAEILIHETRLRFATTHLHHSRAD------ 181 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 L +QA L + P +IAGDFN K Sbjct: 182 ------LREKQATELNRLLAC---GSTPVIIAGDFNAKPAS 213 >gi|162148012|ref|YP_001602473.1| exodeoxyribonuclease III [Gluconacetobacter diazotrophicus PAl 5] gi|161786589|emb|CAP56171.1| putative exodeoxyribonuclease III [Gluconacetobacter diazotrophicus PAl 5] Length = 259 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 80/304 (26%), Gaps = 72/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N + + + D++ LQE+ +A Sbjct: 2 MKIASWNVN----------------SVRQRQAHVLDWLEREKPDLLGLQEIKCEDA---- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-VLQQSYPLLGAKDSFSRAGN 142 R + + +A+ + V ++ P L + +R Sbjct: 42 ------SFPAEAFRAAGYDCVVVGQKSYNGVAILSRLPFSVTARALPFLDGEALQAR--- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + +E G + +++L + S + + L E+ Sbjct: 93 ----YVEIEAGG--LTFGNLYLPNGNSGGSAGYEAKLAF------MEALALHARALLEAG 140 Query: 203 VPFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 FV+AGD+N + ++ + Sbjct: 141 RDFVLAGDYNVCPTDEDCAPGALPPTDALVRPESRAAFRRLIWLGLTDALRALHPHGRYY 200 Query: 248 NKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ID+ ++ + L D + + SDH P+ Sbjct: 201 TFWDYQAGAWPRDCGLRIDHALLSPRIAERLDSA-------QPDRDERGRAQPSDHVPLV 253 Query: 300 IDYD 303 I D Sbjct: 254 ITLD 257 >gi|315921153|ref|ZP_07917393.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695028|gb|EFS31863.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 269 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 38/280 (13%), Positives = 71/280 (25%), Gaps = 43/280 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 V+++S+NI V + Q K ++ D+ LQE + + Sbjct: 30 VKVMSYNI----------YSGQKVYSGKKGMEAIAQVIKKINPDLAGLQEFETKTNKVEN 79 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + K + + K + +Y L + + R Sbjct: 80 ADIIALMKEVTGMQYAFFVKTRDVDGGEYGNLILSKYPISDEVNYDLPRIE-TVEDVYPR 138 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + E GK + HL + N S + + K Sbjct: 139 SMGVVKTEKEGKNFYFGVTHLSHVGNETNRINQTST--------------ILEKTKGMDA 184 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 P ++ GDFN + K + + ID+ + Sbjct: 185 PMILTGDFNALADSGP-----MKILYERFDIGCLNGNYGLTTGT---PVPVKAIDFVLYT 236 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + Y E SDH P+ + Sbjct: 237 PDKGMAPKAYDVYYDAYVE----------SDHFPVVATFS 266 >gi|260172870|ref|ZP_05759282.1| Endonuclease/exonuclease/phosphatase [Bacteroides sp. D2] Length = 277 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 38/280 (13%), Positives = 71/280 (25%), Gaps = 43/280 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 V+++S+NI V + Q K ++ D+ LQE + + Sbjct: 38 VKVMSYNI----------YSGQKVYSGKKGMEAIAQVIKKINPDLAGLQEFETKTNKVEN 87 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + K + + K + +Y L + + R Sbjct: 88 ADIIALMKEVTGMQYAFFVKTRDVDGGEYGNLILSKYPISDEVNYDLPRIE-TVEDVYPR 146 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + E GK + HL + N S + + K Sbjct: 147 SMGVVKTEKEGKNFYFGVTHLSHVGNETNRINQTST--------------ILEKTKGMDA 192 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 P ++ GDFN + K + + ID+ + Sbjct: 193 PMILTGDFNALADSGP-----MKILYERFDIGCLNGNYGLTTGT---PVPVKAIDFVLYT 244 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + Y E SDH P+ + Sbjct: 245 PDKGMAPKAYDVYYDAYVE----------SDHFPVVATFS 274 >gi|327190170|gb|EGE57275.1| exodeoxyribonuclease III protein [Rhizobium etli CNPAF512] Length = 267 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 76/307 (24%), Gaps = 68/307 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + +WNIN ++ Q DI+ LQE N + Sbjct: 2 SFSVTTWNIN----------------SVRLRMPIVEQLVLKHRPDILCLQETKVPNELFP 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 P + + +A+ + + G D+ Sbjct: 46 AAPL---------RAMGYDHIIIHGQKGYHGVAIASRIPLIEDHRQDYCGVGDARH---- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + + E ++I + + ++ + D + T +P + + + E+ Sbjct: 93 ---ISAIFERGNRRIRLHNFYVPAG--GDEPDRTINPKFGHKLDFIEEM-KLLKANGEAN 146 Query: 203 VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD N + D + + L + + Sbjct: 147 TSAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETDGLLEVMRRGAWLDLMRQHVPASEK 206 Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ + L R SDH Sbjct: 207 LYTWWSYRAKDWEAADRGRRLDHIWSSSDLGPHLK-------RIEILKEARGWDRPSDHV 259 Query: 297 PISIDYD 303 P++ +D Sbjct: 260 PVTAHFD 266 >gi|237510534|ref|ZP_04523249.1| metal-dependent hydrolase [Burkholderia pseudomallei MSHR346] gi|235002739|gb|EEP52163.1| metal-dependent hydrolase [Burkholderia pseudomallei MSHR346] Length = 338 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 39/286 (13%), Positives = 78/286 (27%), Gaps = 58/286 (20%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 +++R+ ++NI+ T S + L AD++ LQE+ Sbjct: 47 QPRTRELRIATYNIHG-----------GLGAWTASAAERIAVVLDELRADVIALQEVP-- 93 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + V + + + + AV + + L S Sbjct: 94 --LGGVRGADVLAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----S 146 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 F R A++ +E + V+ HL S + S Q L + Sbjct: 147 FGNREPRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LA 190 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 +P ++ GD N + F + + F + R Sbjct: 191 AFDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS-- 239 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + ++L+ + DH P+ Sbjct: 240 LDRIWVHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 275 >gi|163786739|ref|ZP_02181187.1| hypothetical protein FBALC1_16177 [Flavobacteriales bacterium ALC-1] gi|159878599|gb|EDP72655.1| hypothetical protein FBALC1_16177 [Flavobacteriales bacterium ALC-1] Length = 359 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 41/341 (12%), Positives = 91/341 (26%), Gaps = 55/341 (16%) Query: 5 YVLALVFFLVPCTASVAQKVRLVS---WNINTLSEQEGVSLWKN------------SVKR 49 ++ VF + A +K ++ + +N+ L + + + + Sbjct: 8 IIVVFVFAFLNVNAQQKKKFKIHTVAFYNLENLFDSINDPVKFDEASPIMEMNKANRAEV 67 Query: 50 TTSDYTLLRQYAKNLD-------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS 102 + + ++ I+ + E+ + + + + I H Sbjct: 68 YEKKVKNMARVVADIGYEDTKNTPAILGVSEVENRQVLVDLVNDPQ---LLQKDYGIIHF 124 Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG--NRRAVELLVEINGKKIWVL 160 I A+ +K + + S L D +R R + + E+ G I V+ Sbjct: 125 DSPDARGIDVALLYQKSLFKPISTSSHELLIYDDLTRKRVYTRDQLLVSGELEGDLIHVI 184 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 H S ++ + + L+++ I + + GD N Sbjct: 185 VNHWPSRSGGEARSRPKRVAAARLNKRIIDSLQSIDPYAK----IITMGDLNDDPTNASV 240 Query: 221 NDDFWKTIDP-----NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF------ 269 D P + +N D +M Q + Sbjct: 241 KDILKAERKPKKVGFKGIYNPMEEFFKKGLGSNAYRDAWSLFDQILMTQPFLEKDYSSFR 300 Query: 270 -LIQESFSEILYNEDDIKSRGK------------RLSDHCP 297 F++ + +G SDH P Sbjct: 301 FYKAGIFNKYYLTNKRGRWKGYPFRSFADGGFTGGFSDHFP 341 >gi|237714559|ref|ZP_04545040.1| exodeoxyribonuclease [Bacteroides sp. D1] gi|262406425|ref|ZP_06082974.1| exodeoxyribonuclease III [Bacteroides sp. 2_1_22] gi|294643303|ref|ZP_06721129.1| exodeoxyribonuclease III [Bacteroides ovatus SD CC 2a] gi|229445328|gb|EEO51119.1| exodeoxyribonuclease [Bacteroides sp. D1] gi|262355128|gb|EEZ04219.1| exodeoxyribonuclease III [Bacteroides sp. 2_1_22] gi|292641426|gb|EFF59618.1| exodeoxyribonuclease III [Bacteroides ovatus SD CC 2a] gi|295083963|emb|CBK65486.1| exodeoxyribonuclease III [Bacteroides xylanisolvens XB1A] Length = 254 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 30/302 (9%), Positives = 82/302 (27%), Gaps = 73/302 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+N L L ++ + DI+ LQE Sbjct: 2 MKIITYNVNGLRAAVSKGLP---------------EWLAQENPDILCLQETK-------- 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + ++ +A+ K + G R Sbjct: 39 LQPDQYPGEVFEALGYKSYLYSAQKKGYSGVAILTKREP----DHVEYGMGMEAYDNEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + V+ ++ S D + + + + ++ + ++S Sbjct: 95 F-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEDFQKYVMELQKSRP 142 Query: 204 PFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD+N + + + + + Sbjct: 143 NLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLSAGYVDSFRTLCPEKQEYT 202 Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + R IDY ++ + L + + SDHCP+++ Sbjct: 203 WWSYRFNSRAKNKGWRIDYCMVSEPVRPLLKRAYILNEAVH-----------SDHCPMAL 251 Query: 301 DY 302 + Sbjct: 252 EI 253 >gi|227820280|ref|YP_002824251.1| exonuclease [Sinorhizobium fredii NGR234] gi|227339279|gb|ACP23498.1| probable exonuclease [Sinorhizobium fredii NGR234] Length = 257 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 82/303 (27%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN ++ L + + D+V LQE+ + + Sbjct: 1 MKIATFNINGVN----------------KRLENLLAWLDAAEPDVVCLQELKATDG---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + +A+ ++ + L G S +R Sbjct: 41 ------QFPKSAIEAAGYGAVWRGQSAWNGVAILARDSEPVLTRTELPGDP---SDTQSR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + I + ++ + + Y + L + E+ + Sbjct: 92 YIEAAV-----NGILIAALYAPNGNPQPGPKFDYKLAWHRR------LAGHAAELLETGL 140 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSR--CN 246 P V+AGD+N ++ + L K Sbjct: 141 PVVLAGDYNIVPEPRDIYPTRSYDDNALVQPESRAAFRQLLDQGWLDALRKVYPDEELFT 200 Query: 247 ANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 RN+ +D+ ++ + + L D + SDH P+ I Sbjct: 201 FWDYRRNRWQRNAGLRLDHILLSRKLARRLTGGGI-------DRDVRGQENASDHAPVWI 253 Query: 301 DYD 303 + Sbjct: 254 ALE 256 >gi|145606629|ref|XP_364566.2| hypothetical protein MGG_09360 [Magnaporthe oryzae 70-15] gi|145014310|gb|EDJ98878.1| hypothetical protein MGG_09360 [Magnaporthe oryzae 70-15] Length = 296 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 40/300 (13%), Positives = 76/300 (25%), Gaps = 14/300 (4%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 + T ++ +R++S+NI + + R T L N Sbjct: 4 TAFTASLLATTALCTPLRIISYNIRQ-AVVIPTIGERPWADRRPLLTTQLSYETSNRPES 62 Query: 68 IVFLQEMGSYNAVAKVFPKN-TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 ++ +QE+ V V TW S N Sbjct: 63 LLCMQEVLRQQLVDVVGGTEGTWAHVGVGRDDGGDGGEFSPILYRPDTWELDANRTYWLS 122 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 P + + A R + V+ + + L+ Sbjct: 123 ETPDVPGSKGWDAAYPRVVTAARLRHRQTGGRVVLLCTHFDHMGQVARERSADMIVDLAG 182 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + + S P AGD N D D + ++ Sbjct: 183 EWES-----DDGGASKSPVFFAGDLNSDDQNQAYKTLATAMRDSRDLVPEQRLHGNTNTY 237 Query: 247 ANKNLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D+ + + L + +S + + G +SDH P+ +D D Sbjct: 238 TAFTALLTWDDKRLDHVFVKDPSVGGLRFDGYSVLS----NRFDDGIFISDHRPVVLDVD 293 >gi|262341194|ref|YP_003284049.1| exodeoxyribonuclease [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272531|gb|ACY40439.1| exodeoxyribonuclease [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 253 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 93/304 (30%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81 ++++S+NIN + L + ++ + DI+ LQE+ + Sbjct: 1 MKIISYNINGIRSGINKG---------------LSDWIESSNPDILCLQEIKAFPEQIDT 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +F + + ++ + +S I ++K + V G S Sbjct: 46 NIFDQLGYNHYWFSSEKKGYSG--------VGILCKEKPIHVE------YGIGLSSIDQE 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R ++ I+ K + ++ ++L S + N + +++ Sbjct: 92 GR-----VLRIDMKNLSIISLYLPSGNNMKKRLNFKFFFMKNFFSHVKKIRNQFNH---- 142 Query: 202 LVPFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNA 247 +I GD+N + + D W T N + + + Sbjct: 143 ---LIICGDYNICHHEIDIYDPMKHQEISGFLPEEREWMTHFLNLGFVDSFRNCVQEAHH 199 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY ++ + + + +LSDHCP+ Sbjct: 200 YSWWSYRSNARKNNKGWRIDYVMVSSSLKEKIRNA-----------YLLSDVKLSDHCPV 248 Query: 299 SIDY 302 ++ Sbjct: 249 VLEI 252 >gi|227552171|ref|ZP_03982220.1| exodeoxyribonuclease III [Enterococcus faecium TX1330] gi|257892875|ref|ZP_05672528.1| exodeoxyribonuclease [Enterococcus faecium 1,231,408] gi|227178703|gb|EEI59675.1| exodeoxyribonuclease III [Enterococcus faecium TX1330] gi|257829254|gb|EEV55861.1| exodeoxyribonuclease [Enterococcus faecium 1,231,408] Length = 269 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 75/303 (24%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + + LDAD LQE A Sbjct: 20 LKFISWNVNGLRAIVNKNF---------------LEVFHELDADFFCLQETK-LQAGQID 63 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + + D+ R Sbjct: 64 LDLPGYYQYWN----------YAERKGYSGTAIFAKEPALNATYGMGIDIHDTEGRL--- 110 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +++ + + + + L + Sbjct: 111 ------ITLEYSDFFLVTCYTPNSQSELKRLDYRLEWEEAFYNYLENL--------KKQK 156 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + N + F ++ Sbjct: 157 PVIVCGDLNVAHQTIDLKNWKTNQKNAGFTPEERAALSRLLDNGFIDTFRYFYPTQEGVY 216 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ ++ L SDHCP+ Sbjct: 217 SWWNYRFNSRKNNAGWRIDYFLTSKDLAPRLADAKIHT-----------DIMGSDHCPVE 265 Query: 300 IDY 302 +D Sbjct: 266 LDL 268 >gi|224539358|ref|ZP_03679897.1| hypothetical protein BACCELL_04263 [Bacteroides cellulosilyticus DSM 14838] gi|224519019|gb|EEF88124.1| hypothetical protein BACCELL_04263 [Bacteroides cellulosilyticus DSM 14838] Length = 529 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 86/307 (28%), Gaps = 41/307 (13%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 C +++VS+N+ + V + + + L ADI L E Sbjct: 143 TSCDTPETYNLKVVSFNLEHFGKN---------VNTYSLKLPKVALALQALQADIYALVE 193 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + ++ ++ +N A + + + L Sbjct: 194 VEGAAGLEELCQLLNRNC----NTQKYKTRYYKDNVQGMACFIYNSDAVTPVGAISLNKL 249 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD-----SLENTYSPSCSLLSQQ- 187 D++ + A + N ++ + H KS + + + + Q Sbjct: 250 ADNYL-PERKTAQGFQLNSNQERFILCCNHWKSKSGSNVPEQYKDKGDGQGAYNPRRVQE 308 Query: 188 AQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 A+ +I + + + ++ GD N +T++ + Sbjct: 309 AEATLKFIKEITKTYNDPDVLVVGDLNAYTCEDPI-----RTLENGGLVNLLTTYA-PNQ 362 Query: 246 NANKNLRNKI----PIDYFVMDQNAYKFLIQESFSEILYNED---------DIKSRGKRL 292 + N +D+ + K + I +E K R Sbjct: 363 YSYAYFSNGSYAVGYLDHSLATSTLEKQVTDARPFRINADEPQKMDVDQSGVQKDNMYRC 422 Query: 293 SDHCPIS 299 SDH PI Sbjct: 423 SDHSPIV 429 >gi|124266264|ref|YP_001020268.1| hypothetical protein Mpe_A1072 [Methylibium petroleiphilum PM1] gi|124259039|gb|ABM94033.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 270 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 44/300 (14%), Positives = 93/300 (31%), Gaps = 50/300 (16%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++P + +++R+ ++NI+ + + L + LDAD+V LQ Sbjct: 8 VLPPASGDERRLRVATYNIH--------KGVRGVGPAKRLEIHNLGLAIEALDADLVCLQ 59 Query: 73 EMGSYNAVAK--------VFPKNTWCIFYSTE-RLINHSKRDSNNDIHTAIAVRKKNVRV 123 E+ ++ +P+ F + E + + A+ + Sbjct: 60 EVRRFHKRDARRFDRTSFGWPQQGQAEFLAPEGYDVAYRTNAITRHGEHGNALLSRWSIG 119 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + + S R R + + V G+ + + H S S Sbjct: 120 EPNHHDV-----SDHRFEQRGLLHVQVNWQGRAVDTIVAHFGL-------------SHSS 161 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 +Q Q L ++ Q+ + VP ++AGDFN L + + S Sbjct: 162 RLRQVQRLAAFVRQELDPAVPLLVAGDFNDWGERLDG--AMQEAGLRRAVAPSAKGLQRS 219 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +D + + R+SDH P+ +++ Sbjct: 220 LTFPSLAPVF--ALDRVYTRG-----------WRCVSTFVPRGATWARMSDHLPLVAEFE 266 >gi|323490286|ref|ZP_08095501.1| exodeoxyribonuclease III [Planococcus donghaensis MPA1U2] gi|323395956|gb|EGA88787.1| exodeoxyribonuclease III [Planococcus donghaensis MPA1U2] Length = 251 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 71/304 (23%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++AD+ LQE+ Sbjct: 1 MKLISWNVNGLRAVMKKGFM---------------DFFTEVNADVFCLQEIKLQEG-QIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S +AV+ R Sbjct: 45 MDLPGYYTYWNYAHKKGYSGTAIFTKQK-PVAVQYGLGLEEL-------------DTEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +V+ ++ + + + + L ++ Sbjct: 91 I-----ITLEFDSYYVITVYTPNSQHGLLRLDYRLLWEEAILSFVKTL--------DNHK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + F Sbjct: 138 PVLLCGDLNVAHEEIDLKNPKANKKNSGFTPEERSKMTQFLESGFVDTFRYFYPEEEGHY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ Q L + SDHCP+ Sbjct: 198 SWWSYRSNCREKNVGWRIDYFLASQRLVPELQNAKIH-----------KDIWGSDHCPVE 246 Query: 300 IDYD 303 + + Sbjct: 247 LQIE 250 >gi|297816036|ref|XP_002875901.1| hypothetical protein ARALYDRAFT_347932 [Arabidopsis lyrata subsp. lyrata] gi|297321739|gb|EFH52160.1| hypothetical protein ARALYDRAFT_347932 [Arabidopsis lyrata subsp. lyrata] Length = 684 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 98/337 (29%), Gaps = 87/337 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 + V+WN N+ + R +D++ ++ + D D++ +QE+ A K Sbjct: 364 KFVTWNANSF------------LLRVKNDWSQFSKFVSDFDPDVIAVQEVRMPAAGGKGK 411 Query: 85 PKNTWCI----------------FYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQS 127 PKN + S+ N+ S + + A+ K ++ Sbjct: 412 PKNPEELSDDTKVLREEKQILTRALSSPPFGNYRVWWSLADSKYAGTALLVKKCFKPKKV 471 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 Y L S R + + +L+ + + + S + Sbjct: 472 YFNLDKLASKHEPDGRVILA-----EFETFRLLNTYSPN-----NGWKEEENSFQRRRKW 521 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINY------------------------------ 217 + + +++ K S P + GD N Sbjct: 522 DKRIVEFLN--KTSDKPLIWCGDLNVSHEEIDVSHPEFFATAKLNGYVPPNKEDCGQPGF 579 Query: 218 -LGNNDDFWKTIDPNDSLIRFPKEK----------DSRCNANKNLRNKIPIDYFVMDQNA 266 F +T+ + + S K ++ IDYF++ + Sbjct: 580 TPSERRRFGETMKEGMLVDAYRYLHKEQDMESGFSWSGNPIGKYRGKRMRIDYFLVSEQL 639 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + G SDHCP++++ Sbjct: 640 KDRIVSCKMHGRGIELE-----GFYGSDHCPVTLELS 671 >gi|154149895|ref|YP_001403513.1| exodeoxyribonuclease III Xth [Candidatus Methanoregula boonei 6A8] gi|153998447|gb|ABS54870.1| exodeoxyribonuclease III Xth [Methanoregula boonei 6A8] Length = 269 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 35/307 (11%), Positives = 83/307 (27%), Gaps = 65/307 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-- 79 +K++L+SWN++ L + + +D DI+ LQE + Sbjct: 2 EKLKLISWNVDGLRARCKAGQFIK---------------LLQVDFDILCLQETKTPELDI 46 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 ++ + +S + + + + K + Sbjct: 47 PQEIRSDKKYYSHFSEVQKGS----------FAGVGILSKIECRQISD----NFGGTKFD 92 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + + +L+I+ + + + S + L ++ + Sbjct: 93 KEGRILIA-----EYDRFTLLNIYFPLG----AGKPDTPDTLSHKLEFYDTLLGFVKELL 143 Query: 200 ESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSR 244 +I GDFN + ++ + F + + Sbjct: 144 SQKKNVIICGDFNIAHKDKDLVNAKTTPLIVGIYPEEREKLNELERLGFVDAFRYKHPNL 203 Query: 245 CNANKNLRNK--------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 ++ +DYF + + + D SDHC Sbjct: 204 VRYSRWPYQNNSRELNLGWRLDYFFVSAGLKDSITESEMLYHPGESDSHP--QIAGSDHC 261 Query: 297 PISIDYD 303 PI+++ Sbjct: 262 PITLELS 268 >gi|319780773|ref|YP_004140249.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166661|gb|ADV10199.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 268 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 75/309 (24%), Gaps = 72/309 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80 + +WNIN ++ + D++ LQE + Sbjct: 2 PFSIATWNIN----------------SVRLRMPIVERLLVEHAPDVLCLQETKVPDELFP 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K F K + + +A + L + +DS Sbjct: 46 EKAFRKLGYEHIA-----------FHGQKGYHGVATVARRPIELVEKRRFCEIEDSRH-- 92 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + + V GK I + + ++ + D + + + I + + Sbjct: 93 -----LSVTVRAGGKAILLHNFYVPAG--GDEPDPVINRKFKHKLDFVAEMNA-IRAEHD 144 Query: 201 SLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + V+ GD N + ++F + + Sbjct: 145 EVSGSVLVGDLNIAPLEHDVWSHKQLLNVVSHTPVETENFEAMRRAGNWVDLMRLNVPDE 204 Query: 245 CNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + +D+ N Y + +R SD Sbjct: 205 QKLYTWWSYRAQDWELSNRGRRLDHVWSSPNLVPSFSG-------YEILRLARGWERPSD 257 Query: 295 HCPISIDYD 303 H P+ +D Sbjct: 258 HVPVIARFD 266 >gi|293571415|ref|ZP_06682444.1| exodeoxyribonuclease III [Enterococcus faecium E980] gi|291608506|gb|EFF37799.1| exodeoxyribonuclease III [Enterococcus faecium E980] Length = 250 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 75/303 (24%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + + LDAD LQE A Sbjct: 1 MKFISWNVNGLRAIVNKNF---------------LEVFHELDADFFCLQETK-LQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + + D+ R Sbjct: 45 LDLPGYYQYWN----------YAERKGYSGTAIFAKKPALNATYGMGIDIHDTEGRL--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +++ + + + + L + Sbjct: 92 ------ITLEYSDFFLVTCYTPNSQSELKRLDYRLEWEEAFYNYLENL--------KKQK 137 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + N + F ++ Sbjct: 138 PVIVCGDLNVAHQTIDLKNWKTNQKNAGFTPEERAALSRLLDNGFIDTFRYFYPTQEGVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ ++ L SDHCP+ Sbjct: 198 SWWNYRFNSRKNNAGWRIDYFLTSKDLEPRLADAKIHT-----------DIMGSDHCPVE 246 Query: 300 IDY 302 +D Sbjct: 247 LDL 249 >gi|288917788|ref|ZP_06412150.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EUN1f] gi|288350844|gb|EFC85059.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EUN1f] Length = 452 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 90/297 (30%), Gaps = 36/297 (12%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGS 76 + ++++NI L E + + L DIV +QE Sbjct: 36 SPAGGSFSVLTYNIAGLPEALSSAETP--------RAESTTTIGQRLGPYDIVQVQE--D 85 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 +N + ++ +T + + N + + ++ DS Sbjct: 86 FNYHSYLYDGDTTHAYRTPTSGGVPFGSGLNTLSKVG------YSDLDRVTWDDCSTFDS 139 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + + + G+ ++V +L + S + + S L +I+ Sbjct: 140 ADCLTPKGFTLKRIRL-GEGVYVDFYNLHADAGTTSADTSARASN------LSQLASYIS 192 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR---------FPKEKDSRCNA 247 + V+ GD N + G+ + + C+ Sbjct: 193 SH-SAGNAVVVMGDTNARYTRTGDTIAAFAAANGLTDAWVKLERGGVAPATGSTALVCDE 251 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +D + +++ L + N D + S G LSDH PI++D+ + Sbjct: 252 AAPTDTCEVVDKVLYRGSSFVTLNATGY--ANRNADFLNSAGVMLSDHFPIAVDFSW 306 >gi|281417190|ref|ZP_06248210.1| exodeoxyribonuclease III Xth [Clostridium thermocellum JW20] gi|281408592|gb|EFB38850.1| exodeoxyribonuclease III Xth [Clostridium thermocellum JW20] Length = 251 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 74/302 (24%), Gaps = 78/302 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +L+SWN+N L Y K DADI +QE Sbjct: 3 KLISWNVNGLRACINKGF---------------LDYFKKADADIFCIQESKVQPG-QIEL 46 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + + +++ +S I PL +R Sbjct: 47 ELDGYHQYWNYAERKGYSGTAVFTRIK-----------------PLYVQNGIGIDEHDRE 89 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + +E + ++++++ + + L ++ P Sbjct: 90 GRVITLEFDN--YYLVNVYTPNAKKELERLDYRMKWEDDFRNYLVGL--------KAKKP 139 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GD N + + + F + A Sbjct: 140 VIVCGDMNVAHKEIDLKNPESNRRSAGFTDEERAKFTELLNAGFIDTFRFFYPDKTGAYT 199 Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 IDYF + + L+ S + SDHCP+ + Sbjct: 200 WWSYMFNARARNAGWRIDYFCVSEELKDRLVSASIHD-----------DVMGSDHCPVEL 248 Query: 301 DY 302 Sbjct: 249 QI 250 >gi|295699065|ref|YP_003606958.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1002] gi|295438278|gb|ADG17447.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1002] Length = 269 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 51/304 (16%), Positives = 88/304 (28%), Gaps = 70/304 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+R+ ++NIN S L Q+ + D+V LQE+ AV Sbjct: 3 KLRIATFNING----------------IRSRQAALLQWLEREAPDVVCLQEL---KAVDS 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP + R + +A+ K L++ L G +D + Sbjct: 44 AFPVD-------ALREAGYGSVWQGQSAWNGVAILAKGDAPLERRRGLPGFEDDTH---S 93 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + ++ ++L + + Y + L Q ES Sbjct: 94 RYIEAAV-----GGVLIVCLYLPNGNPQPGPKFDYKLA------WFDHLIAHAAQLYESG 142 Query: 203 VPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCN 246 P VIAGDFN + + K + + D R Sbjct: 143 HPVVIAGDFNVVPTDEDIYNPRSWLKDALLQPESRERYRKLLAQGWTDALRTHFGDERVY 202 Query: 247 ANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID+ ++ + L D SDH P Sbjct: 203 TFWDYFRRHWDTNSGLRIDHLLLSADLAPRLRNAGV-------DRWVCGEPHASDHAPTW 255 Query: 300 IDYD 303 I+ + Sbjct: 256 IELE 259 >gi|324329013|gb|ADY24273.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 352 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 108/324 (33%), Gaps = 64/324 (19%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S +T ++ + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKAQTETNLKSMLSFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117 LQE+ + + F N S + + ++ Sbjct: 110 LQEVDIKSM--RSFDVNGHEFLKKGLPDYASSFGKNYDTKWVPVPITSPMGYAEAGLSTF 167 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLE 174 K + + L G + R + R VE + +N GK + ++++HL + Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA-------- 219 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 Y + QQ ++LK+++ + ++ ++ GD+N+ ++ + +D + P + Sbjct: 220 --YDEGGKIRKQQVEFLKEYMNKHYKNGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWLV 277 Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278 D + ID F++ N ++ ++ Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 335 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P+S + Sbjct: 336 KFEN----------SDHNPVSAVF 349 >gi|315303668|ref|ZP_07874193.1| exodeoxyribonuclease III [Listeria ivanovii FSL F6-596] gi|313627958|gb|EFR96566.1| exodeoxyribonuclease III [Listeria ivanovii FSL F6-596] Length = 251 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 84/304 (27%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L +Y ++DADI LQE A Sbjct: 1 MKLISWNVNGLRAVVKKGF---------------LEYFDSVDADIFCLQETK-LQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + Q + D+ R Sbjct: 45 LDLPGYKDYWN----------YAVKKGYSGTAIFTKKEPLSVQYGLGIEEHDTEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + ++ + + Sbjct: 91 -----VITLEFENFFMVTVYTPN-------SQAELKRLDYRMTFEDAILAYVKK-LDETK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + F +A Sbjct: 138 PVILCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFTAFLEAGFVDSFRYFYPDLEDAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + L+ + SDHCP+ Sbjct: 198 SWWSYRMNARARNTGWRIDYFVVSERLKDNLVDAKIHPDVL-----------GSDHCPVE 246 Query: 300 IDYD 303 ++ + Sbjct: 247 LELN 250 >gi|228988325|ref|ZP_04148418.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228771390|gb|EEM19863.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 352 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 45/325 (13%), Positives = 108/325 (33%), Gaps = 70/325 (21%) Query: 21 AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++ ++NI G +S ++T + + + +N ++D LQ Sbjct: 52 GNEFKVTTFNIGYGGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFALLQ 111 Query: 73 EMG----------SYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 E+ + + K P + + + N ++ Sbjct: 112 EVDIKSLRSFDVNGHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYA-----EAGLST 166 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSL 173 K + + L G + R + R VE + +N GK + ++++HL + Sbjct: 167 FSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEYTIPVNNGKHVRLVNLHLSA------- 219 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 Y + QQ ++LK+++ + ++ ++ GD+N+ ++ + +D + P Sbjct: 220 ---YDEGGKIRKQQVEFLKEYMNKHYKNGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWL 276 Query: 234 LIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSE 277 + D + ID F++ N ++ + Sbjct: 277 VELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKD 334 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302 + + SDH P+S + Sbjct: 335 LKFEN----------SDHNPVSAVF 349 >gi|163787900|ref|ZP_02182346.1| endonuclease/exonuclease/phosphatase family protein [Flavobacteriales bacterium ALC-1] gi|159876220|gb|EDP70278.1| endonuclease/exonuclease/phosphatase family protein [Flavobacteriales bacterium ALC-1] Length = 340 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 38/287 (13%), Positives = 90/287 (31%), Gaps = 57/287 (19%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + + ++S+N+ + + + ++ +I+ LQE Sbjct: 98 KNISVMSYNVRLFNIYSWLPSETVKKD--------IIEFIHKEKPEILCLQEYRKD---D 146 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + N + S + + V K + S ++ Sbjct: 147 PIVLDNYYNFNASHKDTVKR-----------GQVVFSKFPIINSGSLEFPNTFNN----- 190 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA--------QWLKD 193 + + + I V ++HL+S +E + + L +Q + ++ Sbjct: 191 ---GIFVDIVKQKDTIRVYNLHLQSSGIQTDVEALKNETSDNLFKQVGSTFKLQQEQVEL 247 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 ++ K + ++ GDFN +K I N+ + F + + Sbjct: 248 FLKHKSKCNYKTIVTGDFNNTA-----YSYIYKEIKGNNLVDTFEEAGNGFGKTYDFKFF 302 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ + D++ + + K+ +LSDH PI Sbjct: 303 PMRIDFILADKD--------------FTVNGFKTYDVKLSDHYPIKA 335 >gi|153008297|ref|YP_001369512.1| exodeoxyribonuclease III Xth [Ochrobactrum anthropi ATCC 49188] gi|151560185|gb|ABS13683.1| exodeoxyribonuclease III Xth [Ochrobactrum anthropi ATCC 49188] Length = 268 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 82/306 (26%), Gaps = 68/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +WNIN L+ Q+ ++ D++ LQE + Sbjct: 3 FSVATWNIN----------------SVRLRMPLVEQFLRDYQPDVLCLQETKCP---DNL 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + S + +A + + D Sbjct: 44 FPSKGFRAL------GYEHIAISGQKGYHGVATISRRHLTGVEKIGFCDMGDCRH----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +VE GKK+ + + ++ + D + +P + + ++ + +K+ Sbjct: 93 --LSAVVEAGGKKLRIHNFYVPAG--GDEPDPVINPKFAHKLAFLEEMRAIVADRKDGHS 148 Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247 ++ GD N N + ++ K + + + Sbjct: 149 SVLV-GDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRVKGGWSDLMRQLIPADQKI 207 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + ++ R SDH P Sbjct: 208 FTWWSYRAKDWAESDRGRRLDHVWGSADLEGYMQG-------LQILRDARGWDRPSDHVP 260 Query: 298 ISIDYD 303 + +D Sbjct: 261 VIATFD 266 >gi|283781932|ref|YP_003372687.1| endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068] gi|283440385|gb|ADB18827.1| Endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068] Length = 290 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 34/308 (11%), Positives = 78/308 (25%), Gaps = 42/308 (13%) Query: 2 IRKYVLALVFFLVPCTASVA---------QKVRLVSWNINTLSEQEGVSLWKNSVKRTTS 52 R+++ + + A + +R++++N+ + Sbjct: 7 RRRFLKTTLAGTLATAAFTGTSIAGAEDKKTLRVIAYNVYECTGWPKERALGKKATALGQ 66 Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDI 110 + DI+ E V ++ + F S + Sbjct: 67 MPVRFAHELALYEPDIINFSESPKEPIVKQIAELLGMNYTYFPSGVKWPG---------- 116 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 A+ + Q+ PL+ + V L + + HL Sbjct: 117 ----AILSRFKITGSQNCPLVQGERPADLFTRHWGVATLQIAADHDLVIHSAHLHPDMEP 172 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 + Q+ + + + + + ++ GD N + Sbjct: 173 -----------ATRLQEIPRMLESMEKDLSAGRSMLLMGDLNHTPDTKEYELW-----KK 216 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE-SFSEILYNEDDIKSRG 289 F + K+ IDY + K + E + ++ + Sbjct: 217 AGWQDTFTQAGAGEGLTIKSDTPDRRIDYILAAGPIAKTIKSSRPLFEGAFRVNNADAES 276 Query: 290 KRLSDHCP 297 LSDH P Sbjct: 277 FALSDHLP 284 >gi|238059546|ref|ZP_04604255.1| hypothetical protein MCAG_00512 [Micromonospora sp. ATCC 39149] gi|237881357|gb|EEP70185.1| hypothetical protein MCAG_00512 [Micromonospora sp. ATCC 39149] Length = 338 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 36/300 (12%), Positives = 78/300 (26%), Gaps = 48/300 (16%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWK----------------NSVKRTTSDYTLLRQYAKN 63 +R+V++NI + + + LL + + Sbjct: 57 AGMPLRVVTFNIWGTGTPHRYWHDRAVLRGARAGSPALGEADERRVWRRRAALLTRALAD 116 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 DAD+V LQE+ + A + + S +AV + Sbjct: 117 ADADLVALQEVPARAA-----AGAGRARELADGLRGRYDVAHSGPGPTPGLAVLSRAPIR 171 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 ++++P+ G ++E++ + V HL L Sbjct: 172 ARRAFPVPGFGGFGGHP-------TVLEVSTCAVTVWVAHLPVGP-------DEVKEACL 217 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 +A + P ++ GD N + + + + Sbjct: 218 RGLEAAAVA------APRERPLLVCGDLNCPADGPLMGRLRDRGVLVDA---WASAGGSP 268 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D+ + +D G+ SDH +++ D Sbjct: 269 AALTMPVPVPTWRLDHVLYRAGDPVRAATRPALLGTACDDS----GQYPSDHFGVALTLD 324 >gi|169823955|ref|YP_001691566.1| exodeoxyribonuclease III [Finegoldia magna ATCC 29328] gi|167830760|dbj|BAG07676.1| exodeoxyribonuclease III [Finegoldia magna ATCC 29328] Length = 253 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 83/306 (27%), Gaps = 78/306 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 ++L+SWN+N +L+ADI LQE+ N + Sbjct: 1 MKLISWNVNGYRAVMKKGFM---------------DAFNSLNADIFCLQEIKMKENQMTD 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + +N ++ V K + + D+ R Sbjct: 46 EMNIEGYHRY----------SYSANKAGYSGTLVYTKVEPIGVSYGIGIDEHDTEGR--- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 ++ + ++++++ + + L+D Sbjct: 93 ------VITCEYEDFFLVNVYTPNSKQKLERLDYRMVWEDEFHNYLNILRDR-------- 138 Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N N + + + + F + + Sbjct: 139 KPVIVCGDLNVAHNEIDLKNPQSNRRSAGFTDEERNKMSLLLNDGYIDTFRYFYPDKTDE 198 Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 IDYF++ + L+ + + SDHCP+ Sbjct: 199 YSYWSYFAKARERNAGWRIDYFLVSDDLKDNLVDAKIHQSI-----------MGSDHCPV 247 Query: 299 SIDYDF 304 ++ +F Sbjct: 248 ELEINF 253 >gi|150007753|ref|YP_001302496.1| exodeoxyribonuclease [Parabacteroides distasonis ATCC 8503] gi|256840019|ref|ZP_05545528.1| exodeoxyribonuclease III [Parabacteroides sp. D13] gi|149936177|gb|ABR42874.1| exodeoxyribonuclease [Parabacteroides distasonis ATCC 8503] gi|256738949|gb|EEU52274.1| exodeoxyribonuclease III [Parabacteroides sp. D13] Length = 284 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 31/307 (10%), Positives = 87/307 (28%), Gaps = 77/307 (25%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNA 79 +K++++++N N L G L ++ D++ +QE + Sbjct: 30 EKLKIITYNTNGLRAAVGKGLP---------------EWLAQEQPDVLCIQETKLQPDQF 74 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 ++ F + + + + + + +A+ K + G Sbjct: 75 PSETFETLGYKSYLFSAQKKGY----------SGVAILTKQEP----DHIEYGMGIEKYD 120 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + + + ++ ++ S D ++ + + ++ + + Sbjct: 121 NEGRF-----LRADFGDVSIVSVYHPSGTSGDERQD-------FKMIWLEDFQKYVVELQ 168 Query: 200 ESLVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 +S ++ GD+N + + + + D Sbjct: 169 KSRPNLILCGDYNICHEPIDIHDPIRNAKNSGFLPEEREWMTRFLSAGFTDTFRFLNPDK 228 Query: 244 RCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + R IDY ++ N + + SDHC Sbjct: 229 QEYTWWSYRFNSRSKNKGWRIDYCMVSDNMKPKVKAAYILNDAVH-----------SDHC 277 Query: 297 PISIDYD 303 P ++ + Sbjct: 278 PAVLEIE 284 >gi|16802368|ref|NP_463853.1| hypothetical protein lmo0323 [Listeria monocytogenes EGD-e] gi|224502384|ref|ZP_03670691.1| hypothetical protein LmonFR_07664 [Listeria monocytogenes FSL R2-561] gi|16409687|emb|CAD00850.1| lmo0323 [Listeria monocytogenes EGD-e] Length = 256 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 77/285 (27%), Gaps = 35/285 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + ++NI K TL + D + ++E + + Sbjct: 2 FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEEPLLPQ-MRDM 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 W F + ++ + P + + S + R Sbjct: 54 KEMQDWDYFGVGRDDGFEKGEFTAVFYNSTRFTLLQEGHFWLSETPDVPSIHSTAM-FPR 112 Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V + +GK+ ++ + HL A L Sbjct: 113 ICVWGKFADSDGKQFYIFNTHLDHIS-------------EEARLFASQLLLKKAATIAEN 159 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDY 259 P +I GDFN + + N K D + K + + LR IDY Sbjct: 160 SPVIILGDFNTEPDTPTYNFITKKYQDAQLISQKHAKGPIGSFHDFRPLRPINELEKIDY 219 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + F Y + G SDH P++ + D+ Sbjct: 220 IFVSEE---------FQVCTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|268316715|ref|YP_003290434.1| Endonuclease/exonuclease/phosphatase [Rhodothermus marinus DSM 4252] gi|262334249|gb|ACY48046.1| Endonuclease/exonuclease/phosphatase [Rhodothermus marinus DSM 4252] Length = 370 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 87/312 (27%), Gaps = 64/312 (20%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P A + ++++N+ R + L+ ++ QE+ Sbjct: 82 PSGAEADDTLVVMTYNV--------------PESRRPALGDSLQALVLRYRPQLIGFQEV 127 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-----IAVRKKNVRVLQQSYP 129 G + + P I + + R S D + + V Q+ Sbjct: 128 GVWRYEQRGRPSTVRLIGHLRPLVERQGFRFSVPDPTRGPMFAEVVTLTRLPVVRQEIRL 187 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE--------------- 174 L + R + G+ ++ L+S+ + E Sbjct: 188 LERGPEGLIYQAVRS----ELCWAGRLFVHYNVRLQSYGPVKPWEVLRDGGWKRPANWRR 243 Query: 175 --NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 Y + + Q + L+ WI Q +P +++GDFN + F+ + Sbjct: 244 WLGAYRRAMLQRAAQVRQLRAWIDQ---EELPVILSGDFNSTPD-----QWFYGWLSRGL 295 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + R + ID+ ++ + + L Sbjct: 296 QAAGRLGGIAAPSWPA--GRPLVRIDHVLVSRE--------------WEVLGGAVPAAGL 339 Query: 293 SDHCPISIDYDF 304 SDH P+ + Sbjct: 340 SDHRPVIARLRW 351 >gi|157377076|ref|YP_001475676.1| endonuclease/exonuclease/phosphatase [Shewanella sediminis HAW-EB3] gi|157319450|gb|ABV38548.1| endonuclease/exonuclease/phosphatase [Shewanella sediminis HAW-EB3] Length = 892 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 40/384 (10%), Positives = 94/384 (24%), Gaps = 101/384 (26%) Query: 22 QKVRLVSWNINTLSEQEGV---------------------SLWKNSVKRTTSDYTLLRQY 60 +R+ S+N+ L + +S++ T + Sbjct: 467 GDIRVASFNVLNLFTSDSDIGGSLNPMCKDQADANASKGCGRGAHSLEDYQLQRTKIVNA 526 Query: 61 AKNLDADIVFLQEMGSY------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108 ++AD++ L E+ + N++ P+ F + Sbjct: 527 ITAMNADVIGLMEIENNGFGEHSSIQYLLNSLNAELPQEDAYAFIEPAPADKYQGEFIGT 586 Query: 109 D-IHTAIAVRKKNVRVLQQSYPLLGAKD------------------SFSRAGNRRAVELL 149 D I I R V+ + + + R ++ Sbjct: 587 DAITVGILYRPAKVQPAVDALVIATPEQHAEAGVATRGEGAKVETSPSYDKYQRHSLAQT 646 Query: 150 VEINGKKIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQK 198 I+G+ + V+ HLKS + A+ L + + Sbjct: 647 FMIHGEPLTVVVNHLKSKGSGCLEDWMEFSENKDPADLQGKCNEFRVSAAKVLGESLEDV 706 Query: 199 KE------------SLVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DS 233 + P + D++ + W +++ Sbjct: 707 EGGLLVIGDMNAYGQEDPIAVLTDYDASTSNRDLVTASWTSLNGEVYEQTGSVIDKGYGL 766 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL- 292 + + +D+ + ++ L+ I E ++ + Sbjct: 767 INLSTLSHGTATFGYSYSGELGNLDHALANEVVADKLVAIEDWNINSLESNLFEYSSKYT 826 Query: 293 ------------SDHCPISIDYDF 304 SDH P+ I + Sbjct: 827 GDLAKSENVFSSSDHDPVIIALTY 850 >gi|90422719|ref|YP_531089.1| exodeoxyribonuclease III (xth) [Rhodopseudomonas palustris BisB18] gi|90104733|gb|ABD86770.1| Exodeoxyribonuclease III [Rhodopseudomonas palustris BisB18] Length = 256 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 77/302 (25%), Gaps = 70/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN ++ L + K D+V LQE+ +A Sbjct: 1 MKVATFNINNVN----------------RRLENLLHWLKQARPDVVCLQELKCRDA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ + + L G + S +R Sbjct: 41 ------EFPARAIARAGYQAVWQGENTWNGVAILSRGGAPIVTQTRLPGDR---SDLQSR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E I V ++L + + Y + + L + V Sbjct: 92 Y-----IEAAIDGIVVGCLYLPNGNPQPGPKFDYKLA------WFKRLAGHARKLLRQDV 140 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGDFN L + + + R Sbjct: 141 PVVLAGDFNVAPTALDIYPTRSWDHDALVQPASRAAFARLVKQGWTDALRELHPDRRIYT 200 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +D+ ++ L Q D SDH P I Sbjct: 201 FWHYMRQRYERDAGLRLDHLLLSPQLAPRLRQAGV-------DRAVRGRPGASDHAPTWI 253 Query: 301 DY 302 Sbjct: 254 VL 255 >gi|294806497|ref|ZP_06765338.1| exodeoxyribonuclease III [Bacteroides xylanisolvens SD CC 1b] gi|294446360|gb|EFG14986.1| exodeoxyribonuclease III [Bacteroides xylanisolvens SD CC 1b] Length = 253 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 30/302 (9%), Positives = 82/302 (27%), Gaps = 73/302 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+N L L ++ + DI+ LQE Sbjct: 1 MKIITYNVNGLRAAVSKGLP---------------EWLAQENPDILCLQETK-------- 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + ++ +A+ K + G R Sbjct: 38 LQPDQYPGEVFEALGYKSYLYSAQKKGYSGVAILTKREP----DHVEYGMGMEAYDNEGR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + V+ ++ S D + + + + ++ + ++S Sbjct: 94 F-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEDFQKYVMELQKSRP 141 Query: 204 PFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD+N + + + + + Sbjct: 142 NLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLSAGYVDSFRTLCPEKQEYT 201 Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + R IDY ++ + L + + SDHCP+++ Sbjct: 202 WWSYRFNSRAKNKGWRIDYCMVSEPVRPLLKRAYILNEAVH-----------SDHCPMAL 250 Query: 301 DY 302 + Sbjct: 251 EI 252 >gi|27366657|ref|NP_762184.1| hypothetical protein VV2_0202 [Vibrio vulnificus CMCP6] gi|27358223|gb|AAO07174.1| hypothetical protein VV2_0202 [Vibrio vulnificus CMCP6] Length = 322 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 101/318 (31%), Gaps = 39/318 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + + S N+ G + + T L Q + ++AD+V QE+ S +A+ Sbjct: 2 ITIASCNLFNFLAPPGAYYEFSNILTDNEWNKKTTWLTQQLRAMNADVVAFQEVFSPDAL 61 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-------GA 133 + + ++ + + + AIA R + + Sbjct: 62 NTLTSDLGYP-YFVCLDKPHVTDEFIYSKPVLAIASRWPVIESRLVRFKDCFGDYSENSD 120 Query: 134 KDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSL--------- 183 + ++ +R + ++E+ + V+ +HLKS + + Sbjct: 121 SVTDNKEFSRLPLHAVIELPIIGLCDVITLHLKSQRPTRWQTQQIDQADNTPPSDPVGSW 180 Query: 184 -----LSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP-----ND 232 +A L +I + P VI GDFN IN ++ P D Sbjct: 181 LSTVQRGWEAVLLSQYIKKIYASHARPMVIMGDFNANINSTELKPFVDESNTPLLKDVRD 240 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPI-DYFVMDQNAYKFLIQESFSEILYNEDD------I 285 L P D A ++ I DY ++ + + Q+ D Sbjct: 241 WLREQPIFTDEAQKATHYHGSQGLILDYLLLSEEFAQQNAQQRGKITHLVVWDKHLVNPS 300 Query: 286 KSRGKRLSDHCPISIDYD 303 + SDH +++ D Sbjct: 301 FEVDQFASDHAFVAVTID 318 >gi|332520994|ref|ZP_08397454.1| Endonuclease/exonuclease/phosphatase [Lacinutrix algicola 5H-3-7-4] gi|332043524|gb|EGI79720.1| Endonuclease/exonuclease/phosphatase [Lacinutrix algicola 5H-3-7-4] Length = 339 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 41/291 (14%), Positives = 82/291 (28%), Gaps = 57/291 (19%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + ++++N+ + + + L ++ K DI+ LQE V Sbjct: 98 DNLSIMNFNVRLFNLYKWIPEDNIEN--------KLVEFVKEESPDILALQEYHPRETVD 149 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 F K + S + A+ K V S ++ Sbjct: 150 FSFYKYKYEKL-------------SGKKVKLGQAIFSKYPIVNSGSIAFPNTANN----- 191 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC--------SLLSQQAQWLKD 193 A+ V + V +IHL+S +E + Q + Sbjct: 192 ---AIFADVVKGNDTVRVYNIHLQSLRIDTRVEQLTTQDSEKLFDGVGQTFKMQQFQTEL 248 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 ++ K++ +++GDFN + D + F + Sbjct: 249 FLLHKRQCKYKMIVSGDFNNTALSYVYKEI------KGDLVDTFKAAGNGFGRTYNFKFF 302 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + ID+ + + + + K+ SDH PI F Sbjct: 303 PMRIDFILTHPD--------------FKINSFKTYDVEFSDHYPIMTKVSF 339 >gi|300939825|ref|ZP_07154463.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 21-1] gi|300455357|gb|EFK18850.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 21-1] Length = 253 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 82/288 (28%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ NI+ LR +++ ADIV LQE+ + V Sbjct: 9 SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRSVSADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P + F + + + + + H AV + S Sbjct: 59 LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A R + + GK I V+ +HL + Q L +W Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + ++AGDFN + +D F + Sbjct: 161 VNE-LPDGELVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + LSDH P+S + Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251 >gi|319408771|emb|CBI82428.1| exodeoxyribonuclease III [Bartonella schoenbuchensis R1] Length = 263 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 84/302 (27%), Gaps = 66/302 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNI + + L ++ + DIV LQE+ +A Sbjct: 1 MKIATWNIAG----------------IKARHDTLCKWLQKNQPDIVCLQEIKCIDA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ K D +R Sbjct: 41 ------NFPRDEIETLGYHIETHGQKSFNGVALLSKKRPDELIRQLPGDDNDEQARY--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + N + V ++L + ++S ++ Y + + L Sbjct: 92 --IEAVYSTNKGVVRVASLYLPNGNPINSEKHLYK------MRWMERLYTHAKSLLAYED 143 Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN----------ANKN 250 P ++AGD+N + + + + F + + Sbjct: 144 PLILAGDYNVIPTPLDAKKPEEWKNDALFLPQTRQAFQRIIYLGFYDSIRNVTDDSSFSF 203 Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + ID+ ++ A L+ ++ SDH P+ I+ Sbjct: 204 WDFQAGAWRKNNGIRIDHLLLSPEAADQLV-------CAYSQTEVRGYEKPSDHVPVWIE 256 Query: 302 YD 303 + Sbjct: 257 LN 258 >gi|332561082|ref|ZP_08415400.1| exodeoxyribonuclease III [Rhodobacter sphaeroides WS8N] gi|332274880|gb|EGJ20196.1| exodeoxyribonuclease III [Rhodobacter sphaeroides WS8N] Length = 255 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 81/303 (26%), Gaps = 71/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++N+N ++ +L ++ + D+V LQE Sbjct: 1 MRIATFNVNGVNG----------------RLPVLLRWLEEARPDVVCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + +Q L G +D +R Sbjct: 35 LKAASARFPAAALEAAGYGAVWHGQKSWNGVAILARGAEPVQTRQDLPGVQDG----ESR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + V ++L + + + L + + V Sbjct: 91 YIEAAV-----EGVLVGCLYLPNGNPAPGPKFAAKLA------WFDHLLNHAEEVLRHDV 139 Query: 204 PFVIAGDFNRKINYLG---NNDDFWKTIDPND-----------SLIRFPKEKDSRCNANK 249 P V+AGDFN L + + + Sbjct: 140 PVVLAGDFNVMPTDLDVHRPERWREDALFRPEARAAFARLLAQGWTDSIRHLYPEDRIYT 199 Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +D+ ++ + L D ++ SDH P+ I Sbjct: 200 FWDYLRNAWERDAGLRLDHLLLSPSLLTRLKGAGV-------DRHVRGWEKASDHAPVWI 252 Query: 301 DYD 303 + D Sbjct: 253 EID 255 >gi|312881161|ref|ZP_07740959.1| sphingomyelinase/beta-hemolysin [Vibrio caribbenthicus ATCC BAA-2122] gi|309371053|gb|EFP98507.1| sphingomyelinase/beta-hemolysin [Vibrio caribbenthicus ATCC BAA-2122] Length = 489 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 35/326 (10%), Positives = 92/326 (28%), Gaps = 35/326 (10%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRL---VSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 M + L + A +V + +++N+ L N ++ L Sbjct: 1 MKSNALFFLGVIFLSVNAPANAEVAVPKTMNYNVYMLENT------INPGRKQLQRAQNL 54 Query: 58 RQYAKNLDADIVFLQEMGSY-------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 ++V E+ + + + FP T + + Sbjct: 55 VNSNLFDSMEVVVFNEIFDNASSNVLLDGLKEEFPYQTPVLGREKSGWDDTQGWMGYKPE 114 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 +A+ ++ Q + + + ++E + ++ + H+++ Sbjct: 115 DGGVALVSRHPIKSQTQV-IYQQACGADWLSQKGFIHAVIEKSNQRFHFIATHVQA---- 169 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 ++ Q + ++D+I Q + +I GD N Sbjct: 170 -EDNACKGDDVAIRKSQFETIRDYINQKDIPNDEMIIILGDLNVMKASPEYRSMLETLNV 228 Query: 230 PNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQES-FSEILYNED 283 +AN +DY ++++ + + +++ Sbjct: 229 NEPDSYAGADYSWDPSSNALVHANYPDLKGQLLDYIFVEKDHKQPRYWHNQVWDVVSPRL 288 Query: 284 DIK-----SRGKRLSDHCPISIDYDF 304 +I SDH P+ ++F Sbjct: 289 EIFGTFESYYMYEYSDHYPVVA-FEF 313 >gi|290963099|ref|YP_003494281.1| hypothetical protein SCAB_88221 [Streptomyces scabiei 87.22] gi|260652625|emb|CBG75758.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 332 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 43/338 (12%), Positives = 90/338 (26%), Gaps = 65/338 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---- 78 ++R+ ++N+ E L++ L ADI QE+ Sbjct: 3 QIRIATFNLENFDEP-----APEDPPSLADRIALMKPQITRLRADIACFQEVHGQERPGQ 57 Query: 79 -----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 A+ ++ T + + + + Q Sbjct: 58 PRDLLALKELLAGTNLDGASLTSTKPADDAVFDLRN----LVIATHLPVIKHQQLKNDLV 113 Query: 134 KDSFSRAGN--------------RRAVELLVEI----NGKKIWVLDIHLKSFCFL----- 170 K+ + R + +++ G+ + ++ +HLKS Sbjct: 114 KEPRYQRLTANPADAAPVTIGIERPILHAQIDVDHGAPGRLLHIITVHLKSKLPSNIPGQ 173 Query: 171 ------------DSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKIN 216 D S QA ++ + Q + V+AGDFN + Sbjct: 174 LGGKHGDVWLSADGWAEGSFLSSMKRMSQALEVRRLVDQILHDDPDARIVVAGDFNAEPE 233 Query: 217 YLGN-------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269 + D + + + + ID+ ++ +N Sbjct: 234 EVPVLAICGNVEDTNNGELATRVLVPIEHTIPNEARYTLFHHGRGQMIDHMLVTRNLLAH 293 Query: 270 LIQESFSEILYNEDDIK---SRGKRLSDHCPISIDYDF 304 + ++D I SDH P+ +DF Sbjct: 294 YRGSEIHNEILHDDSIAFATDVKYPESDHAPVVATFDF 331 >gi|229141809|ref|ZP_04270337.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26] gi|228641645|gb|EEK97948.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26] Length = 352 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 43/324 (13%), Positives = 105/324 (32%), Gaps = 64/324 (19%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T + + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKEQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117 LQE+ + + F N S + + ++ Sbjct: 110 LQEVDIKSL--RSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTF 167 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLE 174 K + + L G + R + + I NGK + ++++HL + Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDQAIVEHTIPVNNGKHVRLVNLHLSA-------- 219 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 Y + QQ ++LK+++ + ++ ++ GD+N+ ++ + +D + P + Sbjct: 220 --YDEGGKIRKQQVEFLKEYMNKHYKNGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWLV 277 Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278 D + ID F++ N ++ ++ Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 335 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P+S + Sbjct: 336 KFEN----------SDHNPVSAVF 349 >gi|303287500|ref|XP_003063039.1| predicted protein [Micromonas pusilla CCMP1545] gi|226455675|gb|EEH52978.1| predicted protein [Micromonas pusilla CCMP1545] Length = 323 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 40/319 (12%), Positives = 83/319 (26%), Gaps = 38/319 (11%) Query: 20 VAQKVRLVSWNINTL---SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + ++ +N+ G + + L DAD+V LQE+ Sbjct: 4 STDTLSVIQYNVLADALSGPDAGFTSMPPCDLAFGARRAKLLGKIIAEDADVVCLQEVDH 63 Query: 77 -YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 ++A + Y + + ++ S + +A+ K ++ L G Sbjct: 64 YHDAFKPAMDAAGYDGIYREDEW-SPCRKLSGGMLRDGVAIFYKREKLQLCGMDLPGVPR 122 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN-------------------- 175 + +++ GK I L Sbjct: 123 RSKDVDDDKSLLGKCIDAGKCIVARFRVLPPREETHGPRWEEYQNSTLEVVVATVHLDSK 182 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLV-----PFVIAGDFNRKINYLGNNDD------- 223 QA + + + + + P ++AGDFN + + Sbjct: 183 KDEEGAKKRRNQAFHMMQAVEKMRSNSPTNFFLPVIVAGDFNAVPSEPAVDRVRNGVAGG 242 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + R K K+ IDY + + + + Sbjct: 243 LRSAYEEINGIHPAFTTWKIRSGNYKKGEAKMCIDYIFVPRECGILSVGA-LPDENDIGP 301 Query: 284 DIKSRGKRLSDHCPISIDY 302 K SDH + D Sbjct: 302 KGLPCEKHPSDHLMLRADL 320 >gi|47222275|emb|CAG11154.1| unnamed protein product [Tetraodon nigroviridis] Length = 360 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 39/294 (13%), Positives = 88/294 (29%), Gaps = 45/294 (15%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +K+ L++WN++ L L + D+VFLQE+ Sbjct: 104 PSEDDDRKLSLITWNVDGLDTDN-----------LAERARGLCSFIVLYTPDVVFLQEL- 151 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + + T + ++K V++L+ Sbjct: 152 ----------IPPYVQYLKKRAVSYLIIEGGDEGYFTGMMLKKTRVKLLESEVVAYPTT- 200 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R + V+ G+K+ V+ HL+S +Q + + + Sbjct: 201 ----QMMRNLLVAQVDFRGQKLCVMTSHLESCKGH----------AEERMKQLRLVMQRM 246 Query: 196 TQKKESLVPFVIAGDFNRKINY------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 V + GD N + + D W+ + + R+ + + N + Sbjct: 247 RD-APEDVTVLFGGDTNLRDTEVTKVGLPPSVCDVWERLGKQE-HCRYTWDTKANSNKSV 304 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ D + + + + + G+ SDH I + Sbjct: 305 PFVSRCRFDRIYLRPATEGGVPCVAPDHMALVGLEKLDCGRYTSDHWGIYCSFS 358 >gi|296114978|ref|ZP_06833622.1| putative exodeoxyribonuclease III [Gluconacetobacter hansenii ATCC 23769] gi|295978440|gb|EFG85174.1| putative exodeoxyribonuclease III [Gluconacetobacter hansenii ATCC 23769] Length = 260 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 27/302 (8%), Positives = 70/302 (23%), Gaps = 70/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +WN+N + + Q+ + D++ LQE+ Sbjct: 1 MKFATWNVN----------------SIRQRHDHVLQWLEREQPDLIGLQEIKCIED---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + +A+ + + Sbjct: 41 ------QFPADAFRKAGYESVVVGQKSYNGVAILSRVPFTVTHR------ALPGWECEPP 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +A + + + + +++L + + L + Sbjct: 89 QARYVEIRT--EALTFGNLYLPNGNSGGKAGYDNKLAF------MAALAQHARDLLHAGT 140 Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 FV+ GD+N + ++T+ Sbjct: 141 DFVLTGDYNVCPTDEDLAPGALPPDDALVRPASRAAFRTLLWLGLTDALRALHPVGRFYT 200 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ID+ ++ + L+ D + + SDH P+ + Sbjct: 201 FWDYQAGAWQRDSGLRIDHALLSPRVAERLLSAI-------PDREERNMTQPSDHVPLIV 253 Query: 301 DY 302 Sbjct: 254 TL 255 >gi|224137778|ref|XP_002322649.1| predicted protein [Populus trichocarpa] gi|222867279|gb|EEF04410.1| predicted protein [Populus trichocarpa] Length = 428 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 37/313 (11%), Positives = 88/313 (28%), Gaps = 69/313 (22%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + V+L+SWN+N L + + A+ + D++ LQE Sbjct: 158 PAPLTDGNSVKLMSWNVNGLRALLKFEGFSA------------LELAQRENFDVLCLQET 205 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + ++ + + ++ A+ + + + Sbjct: 206 K----LQASKDVDSIKQCLIDGYENSFWTCSNAKLGYSGTAIVSRIKPLSVCYGLGIPDH 261 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ-WLKD 193 DS R +V ++++ ++ + S Q L + Sbjct: 262 DSEGR---------VVTAEFDSFYLVNTYVPN-------SGDGLKRLSYRITQWDPSLSN 305 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFP 238 ++ + ++S P ++ GD N + + L+ Sbjct: 306 YMKELEKSK-PVILTGDLNCAHQEIDIFNPAGNKRSAGFTEEERQSFGSNFLSKGLVDTF 364 Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 +++ + +DYF++ ++ + D Sbjct: 365 RKQHPNVVGYTYWGYRHGGRKTNKGWRLDYFLVSESIADKVH-----------DSYIVPD 413 Query: 290 KRLSDHCPISIDY 302 SDHCPI + Sbjct: 414 VNGSDHCPIGLVL 426 >gi|160889848|ref|ZP_02070851.1| hypothetical protein BACUNI_02279 [Bacteroides uniformis ATCC 8492] gi|270294104|ref|ZP_06200306.1| exodeoxyribonuclease III [Bacteroides sp. D20] gi|317478856|ref|ZP_07938007.1| exodeoxyribonuclease III [Bacteroides sp. 4_1_36] gi|156860840|gb|EDO54271.1| hypothetical protein BACUNI_02279 [Bacteroides uniformis ATCC 8492] gi|270275571|gb|EFA21431.1| exodeoxyribonuclease III [Bacteroides sp. D20] gi|316905032|gb|EFV26835.1| exodeoxyribonuclease III [Bacteroides sp. 4_1_36] Length = 254 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 32/303 (10%), Positives = 82/303 (27%), Gaps = 73/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+N L ++ D++ LQE Sbjct: 1 MKIITYNVNGLRAAVTKGFP---------------EWLAQEQPDVLCLQETK-------- 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + H + ++ +A+ K + G R Sbjct: 38 LQPEQYPAEALDALGYKHYLYSAQKKGYSGVAILSKQEP----DHVEYGMGIEEYDNEGR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + V+ ++ S D + + + ++++ + + + Sbjct: 94 F-----IRADFGDVSVVSVYHPSGTSGDERQ-------AFKMVWLEKFQEYVLELERTRP 141 Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GD+N + +D W T N I + Sbjct: 142 KLILCGDYNICHEAIDIHDPIRNATNSGFLPEEREWMTRFLNAGFIDSFRWLHPDKQEYT 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY ++ + L + + + SDHCP+ + Sbjct: 202 WWSYRFNSRAKNKGWRIDYCMVSEPVRPMLKEARILGDVVH-----------SDHCPMLL 250 Query: 301 DYD 303 + Sbjct: 251 EIT 253 >gi|77465425|ref|YP_354928.1| exodeoxyribonuclease III [Rhodobacter sphaeroides 2.4.1] gi|77389843|gb|ABA81027.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides 2.4.1] Length = 255 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 80/303 (26%), Gaps = 71/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++N+N ++ +L ++ + D+V LQE Sbjct: 1 MRIATFNVNGVNG----------------RLPVLLRWLEEARPDVVCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + +Q L G +D +R Sbjct: 35 LKAASARFPAAALEAAGYGAVWHGQKSWNGVAILARGAEPVQTRQDLPGVQDG----ESR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + V ++L + + + L + + V Sbjct: 91 YIEAAV-----EGVLVGCLYLPNGNPAPGPKFAAKLA------WFDHLLNHAEEVLRHDV 139 Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGDFN L + + + Sbjct: 140 PVVLAGDFNVMPTDLDVHRPERWREDALCRPEVRAAFARLLAQGWTDSIRHLYPEDRIYT 199 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +D+ ++ + L D ++ SDH P+ I Sbjct: 200 FWDYLRNAWERDAGLRLDHLLLSPSLLTRLKGAGV-------DRHVRGWEKASDHAPVWI 252 Query: 301 DYD 303 D Sbjct: 253 AID 255 >gi|296123488|ref|YP_003631266.1| endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM 3776] gi|296015828|gb|ADG69067.1| Endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM 3776] Length = 253 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 33/283 (11%), Positives = 79/283 (27%), Gaps = 53/283 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+VS+NI+ + + + + L+ D++ LQE+ + A ++ Sbjct: 1 MRIVSFNIH----------KGIGGRDRRYRLERIIEALRALEPDVICLQEVDHHVARSRY 50 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + + + + L R Sbjct: 51 DHQAKLISEALGLVHAHYQLNVRLKEGGYGNLIASRYPLASVHAISLT-----RRHYKPR 105 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A ++V+ ++ ++ HL + Q + + + ++ + Sbjct: 106 GAQLVVVQTPLGRLHLIHWHLGLR-------------ETERHWQVRRMFEHQHFREHRQL 152 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE----KDSRCNANKNLRNKIPIDY 259 P + GD N W+ N + SR + +D Sbjct: 153 PAIAIGDTND-----------WRNTLANGPFAVHGWKQISSPPSRFRSFPAWLPLGALDK 201 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ I + SDH P+ +D Sbjct: 202 VFVNSGVA----------IESCHIAKSRLLRDASDHLPLVVDL 234 >gi|294785528|ref|ZP_06750816.1| endonuclease/Exonuclease/phosphatase family protein [Fusobacterium sp. 3_1_27] gi|294487242|gb|EFG34604.1| endonuclease/Exonuclease/phosphatase family protein [Fusobacterium sp. 3_1_27] Length = 279 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 96/307 (31%), Gaps = 38/307 (12%) Query: 1 MIR-KYVLALVFFLVPCTA--SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 M + K +L+++F L + S A + + S+NI L D Sbjct: 1 MKKGKLLLSIIFALFFSLSVLSSADEAYIASFNILRLGA-------------AKKDIPQT 47 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAV 116 + + DIV L E+ + + V ++ + + I+ S+ + A Sbjct: 48 AKILQGF--DIVGLVEVINRDGVEELVDELNKQSDEKWDYHISPFGVGSSKYKEYFAYVY 105 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 +K V+ ++ K S R +I + +H Sbjct: 106 KKDKVKFIKSEGFYKNGKSSL----LREPYGATFQIGNFDFTFVLVHTIYG--------N 153 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + + + D+ K + IAGDFN + +K D I Sbjct: 154 NEAQRKAENFKMVDVYDYFQDKDKKENDIFIAGDFNL-YALDESFRPLYKHADKITYAID 212 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + N D F Q + S + ++ D+ K + +SDH Sbjct: 213 PAIKTTIGTKGRANSY-----DNFFFSQKYTQEFTGSS-GALDFSGDNPKLMREIISDHI 266 Query: 297 PISIDYD 303 P+ I + Sbjct: 267 PVFIVVE 273 >gi|58040696|ref|YP_192660.1| exodeoxyribonuclease III [Gluconobacter oxydans 621H] gi|58003110|gb|AAW62004.1| Exodeoxyribonuclease III [Gluconobacter oxydans 621H] Length = 282 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 78/305 (25%), Gaps = 67/305 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL++WNIN+L LL+Q + + DIV LQE + + Sbjct: 18 MRLITWNINSL----------------RLRLPLLKQIVEQENPDIVCLQETKVPDPL--- 58 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ ++ P + Sbjct: 59 ------FPAQALAEMGLPHQIYKGMKGYNGVAILSRHELQSVDGTPDWCTRSDCRH---- 108 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + I + D ++ + D + + + W T + Sbjct: 109 --VAASIATPAGPILLHDFYVPAG--GDIPDPEENEKFAHKLAFVDEATSWFTSTPPARS 164 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N ++ + K Sbjct: 165 --ILVGDLNIAPLEHDVWSHKQLLKIVSHTPPEIERLKAWMATGFQDAMRTITPEPEKLY 222 Query: 249 KNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +D+ M + L + + SDH P+ Sbjct: 223 TWWSYRNRDWKKSNRGRRLDHVWMTPDLMPGLRNVRVLQEV-------RDWGSPSDHVPV 275 Query: 299 SIDYD 303 +D+D Sbjct: 276 VLDFD 280 >gi|312131268|ref|YP_003998608.1| exodeoxyribonuclease iii xth [Leadbetterella byssophila DSM 17132] gi|311907814|gb|ADQ18255.1| exodeoxyribonuclease III Xth [Leadbetterella byssophila DSM 17132] Length = 254 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 80/304 (26%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 +++ ++N+N + L ++ + DI+ LQE+ V Sbjct: 1 MKITTFNVNGIRSAINKG---------------LLEWLSKENPDILCLQEIKLSETELVE 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +F + ++ + + +A+ K + + G + + Sbjct: 46 SLFTDLGYHCYWYPAIKKGY----------SGVAILSKIP----ANQIVKGIEHELYDSE 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + ++ + S D + A+ L K + Sbjct: 92 GRIILA-----QFADFQLVSAYFPSGTTGDVRQEIKYKFLDDFLIYAEKL-------KAT 139 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNA 247 P +I GD N + ++ + + K + Sbjct: 140 GTPLLICGDVNICHKEIDIHNPKSNAKTSGFLPEERAWVDRFCECGFVDTFRHKVKDPHH 199 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY + + +SDHCP+ Sbjct: 200 YTWWSYRAGARGKNLGWRIDYIFAANMLPESIQNVHIH-----------SDVMMSDHCPV 248 Query: 299 SIDY 302 S+++ Sbjct: 249 SLEF 252 >gi|167898570|ref|ZP_02485971.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 7894] Length = 299 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 39/286 (13%), Positives = 75/286 (26%), Gaps = 56/286 (19%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +++R+ ++NI+ T S + L AD++ LQE+ Sbjct: 7 AQPRTRELRIATYNIHG-----------GLGAWTASAAERIAVVLDELCADVIALQEVPL 55 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 A + T AV + + L S Sbjct: 56 GGARGADV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----S 107 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 F R A++ +E + V+ HL S + + Q L + Sbjct: 108 FGNREPRGALDADIECGFGVLRVVATHLGL-------------SATERNAQVARL---LA 151 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 +P ++ GD N + F + + F + R Sbjct: 152 AFDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS-- 200 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + ++L+ + DH P+ Sbjct: 201 LDRIWVHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 236 >gi|114564406|ref|YP_751920.1| endonuclease/exonuclease/phosphatase [Shewanella frigidimarina NCIMB 400] gi|114335699|gb|ABI73081.1| Endonuclease/exonuclease/phosphatase [Shewanella frigidimarina NCIMB 400] Length = 377 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 51/369 (13%), Positives = 104/369 (28%), Gaps = 81/369 (21%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVF 70 V S +VS N+ E S K+ L ++ + DI+ Sbjct: 6 VSTAPSPELTFSVVSINLFNFIEPPHAYYDFENIYSDKQWQKKCAWLSEFISHNQPDIIA 65 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV---RVLQQS 127 QE+ S +A+A++ + ++ L AIA + + V Sbjct: 66 FQEVFSPDALARLTESLGYK-YFVALDLPEVVSDYVYRSPVVAIASKYPIIDSANVSPDP 124 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLEN---------TY 177 + + S + +R+ + +++ IHLKS S ++ Sbjct: 125 QWINQLGLAESFSFSRKPLRATIQLPVFGPCDCYVIHLKSKRSGVSRDDISESGLHGGAD 184 Query: 178 SPSCSLLSQQAQWL----------KDWITQKKESLVPFVIAGDFNRKINY---------- 217 + +L + A L + +++++ PF++ GDFN + Sbjct: 185 FVARQVLGRWASSLQRGSESALLCHQMLMRRQQTQQPFMLMGDFNDTMGSELLAAFNNQL 244 Query: 218 ----LGNNDDFWKTIDP----------------------------------NDSLIRFPK 239 D + S + + Sbjct: 245 RVYRSDIEDPGLAKLGETSLMAELQQSSLFDSYELFIDATKCNATLAQDEFESSALVDEQ 304 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKRLS 293 +R + + +DY ++ Q I Y D R + Sbjct: 305 PHPARQPTHYYGNSGSVLDYILVSSEFNPTQQQNLAHIIDYKTFDRHLVRPDYERDSDST 364 Query: 294 DHCPISIDY 302 DH P+ + + Sbjct: 365 DHAPVMMSF 373 >gi|325294131|ref|YP_004279995.1| exodeoxyribonuclease III [Agrobacterium sp. H13-3] gi|325061984|gb|ADY65675.1| exodeoxyribonuclease III [Agrobacterium sp. H13-3] Length = 267 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 34/308 (11%), Positives = 77/308 (25%), Gaps = 68/308 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + +WNIN ++ Q+ DI+ LQE N Sbjct: 2 SFSITTWNIN----------------SVRLRMPIVEQFLVRYKPDILCLQETKCPNGEFP 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + P + + +A+ K G D+ Sbjct: 46 MKPLKALGYEHVIIH---------GQKGYHGVAIASKIPLTEDHRQDYCGIGDARH---- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + + ++ ++I + + ++ + D + + +P + +K + Sbjct: 93 ---ISAIFQVGSRRIRLHNFYVPAG--GDEPDRSINPKFGHKLDFIEEMKA-LRADGVPG 146 Query: 203 VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD N + D + + L Sbjct: 147 TSSILVGDLNIAPLENDVWSHKQLLKIVSHTPVETDGMLDIMKKGNWLDLMRLNVPDSEK 206 Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ Q+ L + + R SDH Sbjct: 207 IYTWWSYRAKDWEAADRGRRLDHIWSSQDLGPSLEK-------IDILREARGWNRPSDHV 259 Query: 297 PISIDYDF 304 P++ + F Sbjct: 260 PVTAHFRF 267 >gi|301310211|ref|ZP_07216150.1| exodeoxyribonuclease III [Bacteroides sp. 20_3] gi|300831785|gb|EFK62416.1| exodeoxyribonuclease III [Bacteroides sp. 20_3] Length = 284 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 31/307 (10%), Positives = 87/307 (28%), Gaps = 77/307 (25%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNA 79 +K++++++N N L G L ++ D++ +QE + Sbjct: 30 EKLKIITYNTNGLRAAVGKGLP---------------EWLAQEQPDVLCIQETKLQPDQF 74 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 ++ F + + + + + + +A+ K + G Sbjct: 75 PSETFEALGYKSYLFSAQKKGY----------SGVAILTKQEP----DHIEYGMGIEKYD 120 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + + + ++ ++ S D ++ + + ++ + + Sbjct: 121 NEGRF-----LRADFGDVSIVSVYHPSGTSGDERQD-------FKMLWLEDFQKYVVELQ 168 Query: 200 ESLVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 +S ++ GD+N + + + + D Sbjct: 169 KSRPNLILCGDYNICHEPIDIHDPIRNAKNSGFLPEEREWMTRFLSAGFTDTFRFLNPDK 228 Query: 244 RCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + R IDY ++ N + + SDHC Sbjct: 229 QEYTWWSYRFNSRSKNKGWRIDYCMVSDNMKPKVKAAYILNDAVH-----------SDHC 277 Query: 297 PISIDYD 303 P ++ + Sbjct: 278 PAVLEIE 284 >gi|289435119|ref|YP_003464991.1| exodeoxyribonuclease III [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171363|emb|CBH27905.1| exodeoxyribonuclease III [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 251 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 85/304 (27%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L +Y ++DADI LQE A Sbjct: 1 MKLISWNVNGLRAAVKKGF---------------LEYFDSVDADIFCLQETK-LQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + Q + D+ R Sbjct: 45 LDLPAYKDYWN----------YAVKKGYSGTAIFTKKEPLSVQYGLGIEEHDTEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +K +++ ++ + + ++ + + Sbjct: 91 -----VITLEFEKFFMVTVYTPN-------SQAELKRLDYRMTFEDAILAYVKK-LDETK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + F +A Sbjct: 138 PVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFTAFLEAGFVDSFRYFYPDLEDAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + L+ + SDHCP+ Sbjct: 198 SWWSYRMNARARNIGWRIDYFVVSERLKDNLVDAKIHPDVL-----------GSDHCPVE 246 Query: 300 IDYD 303 ++ + Sbjct: 247 LELN 250 >gi|229175769|ref|ZP_04303275.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3] gi|228607720|gb|EEK65036.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3] Length = 337 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 45/322 (13%), Positives = 106/322 (32%), Gaps = 60/322 (18%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T ++ + + +N ++D Sbjct: 35 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKKMLSFLQNENSDFTL 94 Query: 71 LQEMG----------SYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKK 119 LQE+ + + K P + + ++ K Sbjct: 95 LQEVDIKSMRSFDVNGHEFLKKGLPDYALSFGKNYDTKWVPVPITSPMGYAEAGLSTFSK 154 Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENT 176 Q + L G + R + R VE + +N K ++++HL + Sbjct: 155 YTVQTAQRFQLPGMEPWPKRLFDLDRAIVEHKIPVNNGKFVRLVNLHLSA---------- 204 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 Y + QQ ++LK+++ + E+ ++ GD+N+ ++ + +D + P + Sbjct: 205 YDEGGKIRKQQVEFLKEYMNKHYENGDYVIMGGDWNQLLSNVQLSDPKFVKERPEWLVEL 264 Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280 D + ID F++ N ++ ++ + Sbjct: 265 PKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 322 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 SDH P+S + Sbjct: 323 EN----------SDHNPVSAVF 334 >gi|300726495|ref|ZP_07059941.1| endonuclease/exonuclease/phosphatase family protein [Prevotella bryantii B14] gi|164416537|gb|ABY53604.1| non-specific nuclease [Prevotella bryantii] gi|299776223|gb|EFI72787.1| endonuclease/exonuclease/phosphatase family protein [Prevotella bryantii B14] Length = 344 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 40/348 (11%), Positives = 97/348 (27%), Gaps = 60/348 (17%) Query: 2 IRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSEQEGVSLWKN---------SVK 48 ++K +L L + + C AQK + +N L + + + Sbjct: 1 MKKNILLLAAWFMACLTVSAQKSFVGYAIGFYNQENLFDTCHDEGKNDYEYLPAKGWNGL 60 Query: 49 RTTSDYTLLRQYAKNLDADIV-------FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH 101 + ++ + Q + D++ L E+ + N + + + H Sbjct: 61 KYSNKLKNMAQVLSEMGTDVIPVGCAAIGLAEVENDNVLKDLVAQP---ALAKRGFNFVH 117 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 + I A+ + +V P + S R + + + + + ++ Sbjct: 118 IEGPDRRGIDCALLYNPQLFQVRNVKLVPYVQELKKDSAFYTRGFLTVSGTLANEHVTII 177 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 HL S + + Q + +KD + +++ ++ GD N Sbjct: 178 VCHLPSRFSASFYRESGAR-------QIKVVKDSL-LREDPTCKVIVMGDMNDDPEDASM 229 Query: 221 NDDFW-----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + + ++ + S D ++ + + Sbjct: 230 YKELAAKENINKVKADEMFNPWYNVHQSGTGTLSYQGAWNLFDQIILSPTLINQNGSKDY 289 Query: 276 SEILYNEDDIKSRGKR-----------------------LSDHCPISI 300 S + Y ++ I R SDH P + Sbjct: 290 STLKYWKNQIFRRDYMFQTEGKYKGSPKRTTAGGVWLNGYSDHLPTVV 337 >gi|330504967|ref|YP_004381836.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina NK-01] gi|328919253|gb|AEB60084.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina NK-01] Length = 363 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 40/325 (12%), Positives = 89/325 (27%), Gaps = 68/325 (20%) Query: 21 AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 Q +++++WN+ L+ + S + + + + D+V Sbjct: 52 GQALKVMTWNVQYLAGKRYVFWYDLPSGDGPDERPSSEDLALTLNEVVRVLRAEQPDVVL 111 Query: 71 LQEMGSYN---------AVAKVFPKNTW----CIFYSTERLINHSKRDSNNDIHTAIAVR 117 LQE+ A+ + + + FY + H + + + R Sbjct: 112 LQELHDNAKASDHQDQLALLQARLGDLYPCSSQAFYWKAGFVPHPRILGSVGMKLGTLSR 171 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLEN 175 + R + P+L A + +RA+ + G+++ ++ H +F + Sbjct: 172 FQIARAERLQLPMLEADPLSRQFQLKRALLVSYLPIRGGEELVAINTHFDAFAQGQNTMQ 231 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-------------------- 215 Q Q D + Q + + +V+ GD N Sbjct: 232 R----------QVQMTDDLLQQLQGTGKTWVLGGDLNLLPPGQFQHLPEGQRSWYAADSE 281 Query: 216 -NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 L ++ + S + +DY Sbjct: 282 LQDLARRYPMIPSLQQASGAEQAQWYTHSPNDPAA-HGPDRTLDYLFYSPRL-------- 332 Query: 275 FSEILYNEDDIKSRGKRLSDHCPIS 299 + +SDH P+ Sbjct: 333 ---TPLASQVRQHDTLSISDHLPVI 354 >gi|302345504|ref|YP_003813857.1| endonuclease/exonuclease/phosphatase family protein [Prevotella melaninogenica ATCC 25845] gi|302149821|gb|ADK96083.1| endonuclease/exonuclease/phosphatase family protein [Prevotella melaninogenica ATCC 25845] Length = 258 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 24/250 (9%), Positives = 66/250 (26%), Gaps = 23/250 (9%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 Q++ + ++NI + + T + L + +I QE+ Sbjct: 20 QRLYVGTYNIRYNNPNDEKEGNA-----WTQRCSHLCDFINFEQPEIFGTQEVLVDQLHD 74 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + +++ + + P + + A Sbjct: 75 LMKGLDSYGYIGVGRDDGKEKGEYAAIFYKKNQLSLLDSGNFWLSPTPERASL-GWDAAC 133 Query: 142 NRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R +++GK+ + + H+ S L+ ++ L Sbjct: 134 IRICTWGKFQDKVSGKQFYFFNAHM-----DHVGTVARRESARLILKRINQL-------- 180 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK--IPI 257 +P ++ GDFN + + + + + ++ I Sbjct: 181 SKGLPTILTGDFNVDQTDEIYQIFSNSGVLRDCYTNALQRMTPTGTWNDFMQDSRSKSRI 240 Query: 258 DYFVMDQNAY 267 D+ + + Sbjct: 241 DHIFVSSDFK 250 >gi|255956321|ref|XP_002568913.1| Pc21g19220 [Penicillium chrysogenum Wisconsin 54-1255] gi|211590624|emb|CAP96819.1| Pc21g19220 [Penicillium chrysogenum Wisconsin 54-1255] Length = 289 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 36/291 (12%), Positives = 79/291 (27%), Gaps = 19/291 (6%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+++ NI + + +R + ++ A + LQE+ Sbjct: 7 PIRVLTHNIRY-ATSSPFKGEQPWAERRQLLFNEFEYETRHCAASFLCLQEVLHNQLGDI 65 Query: 83 V--------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + W + + S A+ V P +K Sbjct: 66 LARLNQDAELETPEWEYIGVGRDDGHEAGEYSPIIYRPAVWELLHWETVWLSKTPETPSK 125 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 S+ A R + + VL ++ D + + ++ + Sbjct: 126 -SWDAASIRIVTIGVFTHRASRNTVLAMNTHL---DDQGSQSRFEAARIIIDKISEYSQ- 180 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-- 252 + + + +AGDFN + N + +D + + + Sbjct: 181 -NKFAKLISGTFLAGDFNSEENQEAYQELTRSLLDAYKQIESSRRYGNHITWTGFGYEDE 239 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY ++ + Q + G SDH + +D Sbjct: 240 PASRIDYVLVRPTGAQG--QRLAVIGYAVLGNRFDDGVLSSDHRAVIVDLT 288 >gi|254818951|ref|ZP_05223952.1| exodeoxyribonuclease III [Mycobacterium intracellulare ATCC 13950] Length = 268 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 69/304 (22%), Gaps = 64/304 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N S + + D D++ +QE ++ Sbjct: 1 MRIATWNVN----------------SIRSRLPRVLDWLARTDVDVLAMQETKCSDS---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + Q S Sbjct: 41 ------QFPTLPFFELGYEVAHVGFNQWNGVAIASRVGLDDVQIGFDGQPTWSGKPEVAA 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK--ES 201 A + + + +++ + L Y L+D + Sbjct: 95 VAEARALAATCGGVRLWSLYVPNGRALGDPHYAYKLD------WLAALRDSAEGWLRDDP 148 Query: 202 LVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246 +AGD+N + I Sbjct: 149 GAAIALAGDWNIAPQDDDVWSMEFFAGATHVSAPERRAFNAIVEAQFTDLVRPFAPGPGV 208 Query: 247 ANKNLRNK--------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + ID+ + D + +GK SDH P+ Sbjct: 209 YTYWDYTRLRFPKRQGMRIDFILGSPALASR-------VTDARIDREERKGKAASDHAPV 261 Query: 299 SIDY 302 +D Sbjct: 262 LVDL 265 >gi|255557747|ref|XP_002519903.1| RNA exonuclease NGL1, putative [Ricinus communis] gi|223540949|gb|EEF42507.1| RNA exonuclease NGL1, putative [Ricinus communis] Length = 443 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 49/347 (14%), Positives = 93/347 (26%), Gaps = 58/347 (16%) Query: 13 LVPCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + T +VRLVS+NI + + + S + KNL+AD + Sbjct: 95 VFSTTKPDGIRVRLVSYNILAQVYVKSSYFPHCPSPSLKWKSRSKAILTILKNLEADFLC 154 Query: 71 LQEMGSYNAVAKV-FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK----------- 118 LQE+ Y++ K + + Y A + + Sbjct: 155 LQEVDEYDSFYKQNMEIHGYSSIYIQRSGQKRDGCGIFYKHDCAELLLEERIEYNDLVNS 214 Query: 119 --------------------KNVRVLQQSYPLLGAKDSFSRAGNR-------RAVELLVE 151 K+V + +D R + Sbjct: 215 VQEEACLCGDKPIETDANGDKSVEPKNGASSKSTPEDRGDPNDPRVRLKRDCIGIMAAFR 274 Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211 + ++ + + + L + K ++ + E +AGDF Sbjct: 275 LKDAFRHIVIVANTHLYWDPEWADVKLAQAKYLLSRLSQFKILVSNQFECSPSLFLAGDF 334 Query: 212 NRKINYLGN------NDDFWKTIDPNDSLI-----RFPKEKDSRCNANKNLRNKIPIDYF 260 N N F T++ D L + + N +DY Sbjct: 335 NSIPGDKVYQYVVSGNSSFAPTVECLDDLPIPLCSVYGHTRGEPPFTNCTPDFTNTLDYI 394 Query: 261 VMDQNAYKFLIQESFSEILY----NEDDIKSRGKRLSDHCPISIDYD 303 + + + SF E+ + SDH PI +++ Sbjct: 395 FFSPD--EKITPISFLELPEGNSPDVLGGLPNFYHPSDHLPIGAEFE 439 >gi|281211659|gb|EFA85821.1| hypothetical protein PPL_01052 [Polysphondylium pallidum PN500] Length = 610 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 34/311 (10%), Positives = 79/311 (25%), Gaps = 58/311 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 +++++N+ + ++ D +++ QE Sbjct: 282 FKILTYNLWNYNNP------------WKQRRNMIVDNIVKQDPELIAFQEARYCQWEGET 329 Query: 75 ----------GSYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 N + + ++ Y + + + + +A+ K Sbjct: 330 DYMPNPRMMGQERNQIQHLVNLLSFQNKKYHYTFIPSMVYLNGQQMQYEGLAILSKYPIK 389 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 S L + R + +LV+ + +L H Sbjct: 390 DTSSIKLSRDFNDNEDVHQRSCLRVLVDTPNGPLNLLTSHFSLSLSGAVRN--------- 440 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 A + ++ Q + P + GD N + K ++ N + D Sbjct: 441 ----AFEVTNYTKQFES---PQIFVGDLNSVPDSHAIQFLVGKVVENNQTGDFQDSFTDW 493 Query: 244 R----------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + IDY + + + + DD +R S Sbjct: 494 TSTNRPVDFVGTYSTLGGTPNKRIDYIMKRGAELELVDFKQLGSEPQPADDDPNREVYAS 553 Query: 294 DHCPISIDYDF 304 DH + Y + Sbjct: 554 DHLSLVATYKW 564 >gi|229592767|ref|YP_002874886.1| hypothetical protein PFLU5388 [Pseudomonas fluorescens SBW25] gi|229364633|emb|CAY52546.1| putative exported protein [Pseudomonas fluorescens SBW25] Length = 362 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 44/343 (12%), Positives = 98/343 (28%), Gaps = 74/343 (21%) Query: 12 FLVPCTASVA------QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD----------YT 55 V C A A Q +++++WN+ L+ + V + + D Sbjct: 36 LPVSCVAPRAPTLLPGQALKVMTWNVQYLAGKNYVFWYDTADGSGPDDRPTVEDMAASLD 95 Query: 56 LLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINH 101 + + ++ DI+ LQE+ + ++P + + + + + Sbjct: 96 EVARVIRDEQPDILLLQELDENAKPSHYQDQLALLQERLVDLYPCSVQAFDWKADFVPD- 154 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWV 159 + A R + + P A + + A+ L +G ++ V Sbjct: 155 WHIFGSVGRKLATLSRYQIEHAERLQLPAPEANIISRQFQPKPALLLTYLPLSDGGQLAV 214 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 L+ L S + +Q + + + + P++I GDFN Sbjct: 215 LNTRLDGDSPGRS----------AVQEQVKTTVKLLDKFEGRGTPWLIGGDFNLLPLGQF 264 Query: 220 NNDDFWKTID---PNDSLIRFPKEKDSRCNANKN-----------------LRNKIPIDY 259 D K ++ + + K N+ + +DY Sbjct: 265 LRLDAGKRGQYSPDSELHLLWDKYPMIPSNSQSSGIDREKWLTHFPNDPSVDGPDRTLDY 324 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + R+S+H P+ + Sbjct: 325 LFYSP-----------RIKRVEAKVRQEDTLRISNHLPVIARF 356 >gi|253996227|ref|YP_003048291.1| Endonuclease/exonuclease/phosphatase [Methylotenera mobilis JLW8] gi|253982906|gb|ACT47764.1| Endonuclease/exonuclease/phosphatase [Methylotenera mobilis JLW8] Length = 251 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 42/287 (14%), Positives = 86/287 (29%), Gaps = 48/287 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS----Y 77 +R+ ++NI+ T+ R+ + L AD+VFLQE+ + Sbjct: 3 NTLRIATFNIHKGLTHFN----------TSLSLHHQRELLRKLHADVVFLQEVRDVHHEH 52 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + +P F + +++ H A+ K + + + Sbjct: 53 SRRFDAWPTAGQMEFLADTIWKDYAYGKNAVYPAGHHGNALLSKFPIIKTTNIDISA--- 109 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + R + + I + I + F QQ +KD+I Sbjct: 110 --HSSEERGMLHSEINIPNWDTPLHTICVHLGLF-----------ARWRKQQLILIKDYI 156 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + + P ++AGDFN G + F + + + + Sbjct: 157 QRHIPAHSPLIVAGDFNDWGMRSGRH-----FSHQVGLQEVFAHQNGKPARSFPSWLPIL 211 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + + S + + +LSDH +S Sbjct: 212 RLDRIYTRGFKIQHVEVHSGAHFV-----------KLSDHAMLSATL 247 >gi|167723990|ref|ZP_02407226.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei DM98] Length = 296 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 75/286 (26%), Gaps = 56/286 (19%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +++R+ ++NI+ T S + L AD++ LQE+ Sbjct: 4 AQPRTRELRIATYNIHG-----------GLGAWTASAAERIAVVLDELRADVIALQEVPL 52 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 A + T AV + + L S Sbjct: 53 GGARGADV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----S 104 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 F R A++ +E + V+ HL S + S Q L + Sbjct: 105 FGNREPRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LA 148 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 +P ++ GD N + F + + F + R Sbjct: 149 AFDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS-- 197 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + ++L+ + DH P+ Sbjct: 198 LDRIWVHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 233 >gi|57157231|dbj|BAD83645.1| deoxyribonuclease I [Anguilla japonica] Length = 282 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 36/302 (11%), Positives = 94/302 (31%), Gaps = 30/302 (9%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 ++ ++ + + ++NI + + + ++ + Sbjct: 3 IIGAFLLILAFVELSTGSLFIGAFNIRSFG---------DKKASNATLVDIIVKIVHMY- 52 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVR 122 DI+ +QE+ + A S + + + R+ +V Sbjct: 53 -DILLIQEVRDSDLSATKKLMQNVNGGSSPHKYKYIVSEPLGRNTYQERYLYLYREDSVS 111 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 V++ GA+ S + NR ++ ++ + + ++++ + Sbjct: 112 VVKNFTYDDGAEASGTDTFNREPFVVMFSSPHTRVPEFALVPQHTSPDEAVKEIDALYDV 171 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ +A+W + ++ GDFN NY+ +D + + S + Sbjct: 172 IVDIRARW----------NTDNIILLGDFNAGCNYVAGSDWQQIRLYTDKSFHWLIPDSA 221 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED--DIKSRGKRLSDHCPISI 300 ++ N D V + ++ S S Y +SDH P+ + Sbjct: 222 DTTVSHTNCPY----DRIVATTTMMEAVVPHSASVYDYMTSLKLKLDMALAVSDHFPVEV 277 Query: 301 DY 302 Sbjct: 278 QL 279 >gi|34762326|ref|ZP_00143329.1| DNASE I HOMOLOGOUS PROTEIN DHP2 PRECURSOR [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|237741833|ref|ZP_04572314.1| dnase I homologous protein dhp2 precursor [Fusobacterium sp. 4_1_13] gi|27887980|gb|EAA25044.1| DNASE I HOMOLOGOUS PROTEIN DHP2 PRECURSOR [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|229429481|gb|EEO39693.1| dnase I homologous protein dhp2 precursor [Fusobacterium sp. 4_1_13] Length = 279 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 97/307 (31%), Gaps = 38/307 (12%) Query: 1 MIR-KYVLALVFFLVPCTA--SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 M + K +L+++F L + S+A + + S+NI L D Sbjct: 1 MKKGKLLLSIIFVLFFSLSVLSLADEAYIASFNILRLGA-------------AKKDIPQT 47 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAV 116 + + DIV L E+ + + V ++ + + I+ S+ + A Sbjct: 48 AKILQGF--DIVGLVEVINRDGVEELVDELNKQSDEKWDYHISPFGVGSSKYKEYFAYVY 105 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 +K V+ ++ K S R +I + +H Sbjct: 106 KKDKVKFIKSEGFYKNGKSSL----LREPYGATFQIGNFDFTFVLVHTIYG--------N 153 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + + + D+ K + IAGDFN + +K D I Sbjct: 154 NEAQRKAENFKMVDVYDYFQDKDKKENDIFIAGDFNL-YALDESFRPLYKHADKITYAID 212 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + N D F Q + S + ++ D+ K + +SDH Sbjct: 213 PAIKTTIGTKGRANSY-----DNFFFSQKYTQEFTGSS-GALDFSGDNPKLMREIISDHI 266 Query: 297 PISIDYD 303 P+ I + Sbjct: 267 PVFIVVE 273 >gi|134282657|ref|ZP_01769361.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 305] gi|226199100|ref|ZP_03794662.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei Pakistan 9] gi|254183777|ref|ZP_04890369.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1655] gi|134246214|gb|EBA46304.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 305] gi|184214310|gb|EDU11353.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1655] gi|225928875|gb|EEH24900.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei Pakistan 9] Length = 338 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 75/285 (26%), Gaps = 56/285 (19%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 +++R+ ++NI+ T S + L AD++ LQE+ Sbjct: 47 QPRTRELRIATYNIHG-----------GLGAWTASAAERIAVVLDELRADVIALQEVPLG 95 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A + T AV + + L SF Sbjct: 96 GARGADV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----SF 147 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R A++ +E + V+ HL S + S Q L + Sbjct: 148 GNREPRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LAA 191 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 +P ++ GD N + F + + F + R + Sbjct: 192 FDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS--L 240 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D + ++L+ + DH P+ Sbjct: 241 DRIWVHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 275 >gi|323488215|ref|ZP_08093465.1| Endonuclease/exonuclease/phosphatase [Planococcus donghaensis MPA1U2] gi|323398073|gb|EGA90869.1| Endonuclease/exonuclease/phosphatase [Planococcus donghaensis MPA1U2] Length = 279 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 87/293 (29%), Gaps = 60/293 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 V+++S+NI +GV D Q ++ A I+ LQE+ + +V Sbjct: 11 VKVMSFNIAHGLGMDGV-----------VDLEKTAQVIEDSCATIIALQEVDRHFSVRSS 59 Query: 84 F---------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 F + + + + + + K +++ L Sbjct: 60 FVDQVGWLSERLGMYAAYGANMDVTPLDSE--RPNQQYGNVILSKYPIKYNENHLLTQVY 117 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 F R +E ++E++G + V + HL + + Sbjct: 118 CPFGNNEQRGILETVIEVDGSYVSVFNTHLALKDEELEVSVD----------------EI 161 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---- 250 + +S P +I GDFN + + K + L + + + N Sbjct: 162 LAITGKSHFPRIITGDFNAPASN--VHIQKLKRHFRDAFLKMKRGDAYTYPSPYVNKETG 219 Query: 251 --LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 R IDY D +SDH PI++D Sbjct: 220 EVFRPATRIDYIFADPYLDVVQAAVI--------------ETAVSDHLPIAVD 258 >gi|297569473|ref|YP_003690817.1| exodeoxyribonuclease III Xth [Desulfurivibrio alkaliphilus AHT2] gi|296925388|gb|ADH86198.1| exodeoxyribonuclease III Xth [Desulfurivibrio alkaliphilus AHT2] Length = 490 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 80/313 (25%), Gaps = 79/313 (25%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 A +RL SWN+N L + A LDAD++ +QE+ Sbjct: 230 SAAPGGTSLRLASWNVNGLRAIAKKGF---------------AELAGELDADLLAIQEIK 274 Query: 76 S--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + A+ + F+ + +S + + Sbjct: 275 AHPDQLPAEARALPGYQAFWLPAKRKGYSGVAIYSR-------------LEPLKVLYGMG 321 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 ++ R ++ + ++++ +L + + C Q + L Sbjct: 322 QEEKYEQEGR-----VLTMEFADFFLVNAYLPNAQPELARLPFKLDFCRHFQQFCENLA- 375 Query: 194 WITQKKESLVPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFP 238 + V+ GD N + + N F Sbjct: 376 -------TQKNVVVCGDLNVAHREIDLARPQENQQSPGFSPAERAWLDGFLANGFTDTFR 428 Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 N + IDYF +D + + + Sbjct: 429 LFNQEGGN-YTWWSYRGGARQRNVGWRIDYFCIDSAGRRRVREAGIR-----------PE 476 Query: 290 KRLSDHCPISIDY 302 SDHCP+++ Sbjct: 477 IMGSDHCPVTLTL 489 >gi|164416540|gb|ABY53606.1| non-specific nuclease [Prevotella bryantii B14] Length = 344 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 40/348 (11%), Positives = 97/348 (27%), Gaps = 60/348 (17%) Query: 2 IRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSEQEGVSLWKN---------SVK 48 ++K +L L + + C AQK + +N L + + + Sbjct: 1 MKKNILLLAAWFMACLTVSAQKSFVGYAIGFYNQENLFDTCHDEGKNDYEYLPAKGWNGL 60 Query: 49 RTTSDYTLLRQYAKNLDADIV-------FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH 101 + ++ + Q + D++ L E+ + N + + + H Sbjct: 61 KYSNKLKNMAQVLSEMGTDVIPVGCAAIGLAEVENDNVLKDLVAQP---ALAKRGFNFVH 117 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 + I A+ + +V P + S R + + + + + ++ Sbjct: 118 IEGPDRRGIDCALLYNPQLFQVRNVKLVPYVQELKKDSAFYTRGFLTVSGTLANEHVTII 177 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 HL S + + Q + +KD + +++ ++ GD N Sbjct: 178 VCHLPSRFSASFYRESGAR-------QIKVVKDSL-LREDPTCKVIVMGDMNDDPEDASM 229 Query: 221 NDDFW-----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + + ++ + S D ++ + + Sbjct: 230 YKELAAKENINKVKADEMFNPWYNVHQSGTGTLSYQGAWNLFDQIILSPTLINQNGSKDY 289 Query: 276 SEILYNEDDIKSRGKR-----------------------LSDHCPISI 300 S + Y ++ I R SDH P + Sbjct: 290 STLKYWKNQIFRRDYMFQPEGKYKGSPKRTTAGGVWLNGYSDHLPTVV 337 >gi|333009779|gb|EGK29228.1| endonuclease/Exonuclease/phosphatase family protein [Shigella flexneri K-272] gi|333020444|gb|EGK39707.1| endonuclease/Exonuclease/phosphatase family protein [Shigella flexneri K-227] Length = 253 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 82/288 (28%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ NI+ LR + + ADIV LQE+ + V Sbjct: 9 SFKVLTINIHKGFTAFNRRF----------ILPELRDAERTVSADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P + F + + + + + H AV + S Sbjct: 59 LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A R + + GK I V+ +HL + Q L +W Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + P ++AGDFN + +D F + Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + LSDH P+S + Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251 >gi|72390874|ref|XP_845731.1| RNA-editing complex protein MP100 [Trypanosoma brucei TREU927] gi|62175829|gb|AAX69956.1| RNA-editing complex protein MP100 [Trypanosoma brucei] gi|70802267|gb|AAZ12172.1| RNA-editing complex protein MP100 [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 894 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 87/299 (29%), Gaps = 35/299 (11%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSL--WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 V ++L++WN+ + + Y ++ + + DAD+V +QE+ Sbjct: 613 PVKASLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPKRYPVIAKIIEEEDADVVGMQEVE- 671 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + F S LI S + AIA + + ++ P+ Sbjct: 672 ----------PVFWEFLSKRPLIRQRYYFSCGHMSPAIAPWGVLMLIHRRRLPVQSINYL 721 Query: 137 FSRAGNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 A + +++ + + HL + S +L + L Sbjct: 722 NVPAWTNHVSLMPVVGLKMVHGTVHIAAAHLLAPYTKSHENARTSQDTALRHHMTKTL-- 779 Query: 194 WITQKKESLVPFVIAGDFNRKIN------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 V GDFN + D W + PN+ E ++ C Sbjct: 780 -------GGGDVVTMGDFNDWPTNEFIMPHESQYVDCWPVLHPNNPGKTM-DETNTFCKL 831 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303 D + + N+++ + SDH +SI + Sbjct: 832 KVEEMFFGRSDKVFLRSRRLVPVEAHLVGTRSVNDENNNADAPAYLFPSDHYGVSITFS 890 >gi|83855258|ref|ZP_00948788.1| exodeoxyribonuclease III, putative [Sulfitobacter sp. NAS-14.1] gi|83843101|gb|EAP82268.1| exodeoxyribonuclease III, putative [Sulfitobacter sp. NAS-14.1] Length = 262 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 30/306 (9%), Positives = 67/306 (21%), Gaps = 71/306 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L +WNIN ++ + D++ LQE S Sbjct: 2 PFTLATWNIN----------------SVRLREPIVLKLLAEHGPDVLCLQECKSPVDK-- 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + +A+ + V + Sbjct: 44 -------IPTAAFIEAGYTHMVARGQKGYNGVAILSRLPLVDAGDQDFATLGHARH---- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V +E + V + ++ + D + + ++DW K Sbjct: 93 ---VAAKLENG---VTVHNFYVPAG--GDVPDREVNEKFGQKLDYLADMRDWFHGDKPEK 144 Query: 203 VPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N D + + ++ + N Sbjct: 145 S--ILVGDLNIAPREDDVWDHKKLLKVVSHTPIEVEKLAETQDAGGFVDVTRQDIPQGNL 202 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + ++ SDH P Sbjct: 203 YSWWSYRAKDWDAADKGRRLDHVWATPDISGAAHSS-------RVLRDARGWEKPSDHAP 255 Query: 298 ISIDYD 303 + +D Sbjct: 256 VFATFD 261 >gi|317479326|ref|ZP_07938461.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] gi|316904614|gb|EFV26433.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] Length = 335 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 39/341 (11%), Positives = 88/341 (25%), Gaps = 57/341 (16%) Query: 1 MIRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKN-----------S 46 M + VL + V + + + +N+ L + + + + Sbjct: 1 MRKLLVLCSFWLCVATLGAQNAERKLYSVAFYNLENLFDTIHDAGKNDYEFLPDGSYQWT 60 Query: 47 VKRTTSDYTLLRQYAKNLDADI-------VFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99 K+ S L + +L D+ + + E + + + + Sbjct: 61 AKKYESKLQNLSKVLGSLSRDLVPEGPAFIGVAEAENSRVLEDLVKHPAISNYEFVHYEG 120 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 I A+ K V L + + R + + ++ G+++ V Sbjct: 121 P-----DRRGIDCALLYDPKQFSVTHSKLVLSTPFEGDTVHLTRGFLIVDGQLAGERVCV 175 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 + H S SP ++Q + LKD + + + + ++ GD N Sbjct: 176 IVNHWPSR-------GAKSPVRVHAARQVKALKDSLMR-SDKKLKLIVMGDMNDDPMDES 227 Query: 220 N-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 + + +D D V+ + K Sbjct: 228 MEVLGARKYPKQVKKGEFYNPWWVTLEDKGVGTLLYRGKWNLFDQIVISKPLLKAKKGLR 287 Query: 275 FSEI------------------LYNEDDIKSRGKRLSDHCP 297 + ++ SDH P Sbjct: 288 YDHNEVFIRDYLIQQDGKYKGSPLRTHGGRTWLNGYSDHLP 328 >gi|317051838|ref|YP_004112954.1| exodeoxyribonuclease III [Desulfurispirillum indicum S5] gi|316946922|gb|ADU66398.1| exodeoxyribonuclease III [Desulfurispirillum indicum S5] Length = 272 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 36/285 (12%), Positives = 79/285 (27%), Gaps = 61/285 (21%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 + + L + D++ LQE ++FP + R + + Sbjct: 13 RAHFHQLEAIIQKYQPDVIGLQE---TKVSDELFPVD-------AIRELGYCSEFHGQPG 62 Query: 111 HTAIAVRKK-NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 H +A+ + +++S+P G G A+ +G +I VL+ F Sbjct: 63 HYGVALLSRAQPNSVRKSFPGDGPDVQRRFIGADYAL-----SDGSRITVLN-----GYF 112 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL----------- 218 + + L ++ Q + ++ GD N Sbjct: 113 PQGESRDHPQKFPAKEKFYADLTAYLQQCHQPAQQLLLMGDMNIAPTDSDVGIGEDNARR 172 Query: 219 ----------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-----------I 257 +++++ L + + I Sbjct: 173 WLRSGKCCFLPEERLWYQSLTDWG-LRDAHRLLFPDMQELSWFDYRSRGFEREPKRGLRI 231 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D+ ++ + L+ D ++ SDHCPI + Sbjct: 232 DHMLVTTPLEEKLLDGGI-------DYEIRALEKPSDHCPIWVKI 269 >gi|316931738|ref|YP_004106720.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1] gi|315599452|gb|ADU41987.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1] Length = 270 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 33/306 (10%), Positives = 69/306 (22%), Gaps = 65/306 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + L +WNIN L+ ++ K DI+ LQE Sbjct: 3 LTLTTWNIN----------------SVRLRIDLVAKFLKAQRPDILCLQETKCP---DDA 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + +N + +AV K DS Sbjct: 44 FPLKRFKRLGYDHIALN------GQKGYHGVAVISKLPFAATDIRTFCDIIDSRH----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V+ ++ + D + +P +K Sbjct: 93 --ISVSVKTADDAPPLVLHNFYVPAGGDIPDPAVNPKFKHKLSFLDEMKACEPLHPAGDQ 150 Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N + + + + + Sbjct: 151 RHILVGDLNVAPHEHDVWSHKQLLKVVSHTPVECEKLLAVLRAGNWVDVARERIPLDQKV 210 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + + R SDH P Sbjct: 211 YTWWSYRAADWTVGDRGRRLDHIWVSEALKDR-------VTDFKILRDARSWDRPSDHVP 263 Query: 298 ISIDYD 303 +++ + Sbjct: 264 VTMTME 269 >gi|301612064|ref|XP_002935555.1| PREDICTED: deoxyribonuclease-1-like isoform 2 [Xenopus (Silurana) tropicalis] Length = 350 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 88/301 (29%), Gaps = 29/301 (9%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 L ++ + C ++ S+NI S LL + + Sbjct: 3 LLVLVAVTACFLQAGFSFKIASFNIQRFSMT---------KVDDPVVLELLIRILSRYE- 52 Query: 67 DIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 ++ ++E+ A+ + + + + LI+ S+ A R+ V+ + Sbjct: 53 -VIAIEEVMNADNTAIISLVKELSLATKLNYNVLISDHLGRSSYREKYAYIYREDIVKPV 111 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + + G ++ + + R + + S + +L Sbjct: 112 EWYHYDDGCENCGTDSFIREPFVARFT----SLTTVVKDFALISIHTSPDYAVMEVDALY 167 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + + +I GD+N +Y+ + + L +K+ Sbjct: 168 DAWVDAKQRL------KMENILILGDYNAACSYVAARHWPIIRLRHAEELAWLIGDKEDT 221 Query: 245 CNANKNLRNKIPIDYFVMDQ-NAYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISID 301 + D V +I + Y+ + K +SDH PI ++ Sbjct: 222 TVSTNTN---CAYDRMVAGGQQLQSGIIPGTAKAFNYHVAYDLTYEMAKAVSDHYPIEVE 278 Query: 302 Y 302 Sbjct: 279 L 279 >gi|78187058|ref|YP_375101.1| hypothetical protein Plut_1196 [Chlorobium luteolum DSM 273] gi|78166960|gb|ABB24058.1| conserved hypothetical protein [Chlorobium luteolum DSM 273] Length = 348 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 33/323 (10%), Positives = 75/323 (23%), Gaps = 57/323 (17%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT-----------LLRQYAKNL--DAD 67 + + L+ WN+ L + + + K + D Sbjct: 31 PESLLLLWWNVENLFDTTDDPGISDEEFTPEGRLHWTPKKLLLKEMRIAYVMKAIATHPD 90 Query: 68 ------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 ++ E+ + + K + + DS + IA+ Sbjct: 91 YGQLPAVLAFAEVENGAVFRRALQKIKGARYRAL-------YHDSPDLRGIDIALAYDPE 143 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 R+ R + + G+ ++ H S F +L Sbjct: 144 RLDFTGMKTYSVP--QDGRPTRDIIVAGFKNRGRPFTLILNHWPSRAFGSALTEKKRIMA 201 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + +++ A + ++ GDFN T++ R Sbjct: 202 ARVARAAADSLLL----QNPDADIIVMGDFNDSPQDRSVRRTLRGTLNR-LQAQRAKDGT 256 Query: 242 DSRCN-------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSE----------------- 277 C + ID ++ + + Sbjct: 257 LYNCWGGSSQPGSYSYRGRWERIDQILVSKGMLSGPGIRTDEPGAFSCFFFRPMFTKSGK 316 Query: 278 ILYNEDDIKSRGKRLSDHCPISI 300 + + SDH P+ + Sbjct: 317 KPWRTYEGGKYSGGYSDHLPLLL 339 >gi|294341555|emb|CAZ89972.1| putative Endonuclease/Exonuclease/phosphatase [Thiomonas sp. 3As] Length = 278 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 88/288 (30%), Gaps = 48/288 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAV 80 ++R+ S+NI+ + L+ + L+ D+VFLQE+ Sbjct: 2 ELRVASYNIH--------KGVLGHGPAKRASILELQTALQGLEPDLVFLQEVQFLHQRNA 53 Query: 81 AKV--FPKNTWCIFYSTERLINHSKRDSN--NDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 ++ +P F + ++ + R + A+ + + + S Sbjct: 54 RRLSGWPALPQHDFLAQALNMHAAYRTNACTRHGEHGNALLSRYPIIDIAHCDV-----S 108 Query: 137 FSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R R + + V + G + + +H F + +Q L D+I Sbjct: 109 DHRFEQRGLLHVQVALPKGGPLHCIVVHFGLF-------------AASRQRQTDRLLDYI 155 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS---RCNANKNLR 252 + + ++AGDFN +G + + K S R Sbjct: 156 AAQVPAQAALIVAGDFNDWHGRIGP-QLLQQGLVDVSEPPLKTNGKTSWRKRVRTYPARL 214 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +P+D + + RLSDH P+ Sbjct: 215 PLMPLDRIYARAFSASEIGLGW-----------GRAWARLSDHAPLLA 251 >gi|239981665|ref|ZP_04704189.1| exodeoxyribonuclease [Streptomyces albus J1074] gi|291453527|ref|ZP_06592917.1| exodeoxyribonuclease [Streptomyces albus J1074] gi|291356476|gb|EFE83378.1| exodeoxyribonuclease [Streptomyces albus J1074] Length = 264 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 75/304 (24%), Gaps = 71/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 + + + N+N L ++ DAD+V LQE+ Sbjct: 2 LTVTTANVNGLRAAAKKGY---------------VEWLAATDADVVCLQEVRAEESQLPE 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 V W + ++ + +A+ + ++ D+ R Sbjct: 47 AVRAPEGWHVVFAP----------AAAKGRAGVALLTRRAPERVRTGFGSAEFDTSGR-- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++ G + V ++L S ++ + + + L+ Sbjct: 95 -----YVEADLPG--VTVASLYLPSGEVGTERQDEKERFMAEFLEYLKELRARA---AAD 144 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 V+ GD+N + + Sbjct: 145 GREVVVCGDWNIAHQEADLKNWKANRKSSGFLPEERAWLDRVYAEAGYADVMRALHPEQA 204 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + ID V ++ + + +R SDH Sbjct: 205 GPYSWWSYRGRAFDNDSGWRIDLHVATPGLAARAVKGQV-------ERAATHEERWSDHA 257 Query: 297 PISI 300 P+++ Sbjct: 258 PVTV 261 >gi|126728921|ref|ZP_01744736.1| endonuclease/exonuclease/phosphatase family protein [Sagittula stellata E-37] gi|126710851|gb|EBA09902.1| endonuclease/exonuclease/phosphatase family protein [Sagittula stellata E-37] Length = 333 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 43/333 (12%), Positives = 89/333 (26%), Gaps = 54/333 (16%) Query: 24 VRLVSWNINTLS----EQEGVSLWKNSVKRT----TSDYTLLRQYAKNLDADIVFLQEMG 75 +R ++N+ ++ + R + L K LDAD V + E Sbjct: 1 MRFATYNVEWFDALFDDRGHLIADDGWSGRRDVTRRAQAEALGTVFKVLDADAVMVIEAP 60 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + T R +N+ IA+ R+ + P Sbjct: 61 DTGSRRSTTRALTAFAQAFDLRTSATITGFTNDTQQE-IALLYDPARLTVRHDPKATPGA 119 Query: 136 SFSRAGNRRAVEL-----------------LVEINGKKIWVLDIHLKSFCFLDSLENTY- 177 R +++ + +G + ++ HLKS + Sbjct: 120 PGFDTEFRIDLDVDDFPDPVRFSKPPLELAVTTASGHAVHLIGAHLKSKAPHGARSRDDV 179 Query: 178 ----SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-----TI 228 + QA WL+ I ++ GD N F + + Sbjct: 180 MRLAIANRRKQLAQAIWLRARIDALLADGQSLIVMGDLNDGPGLDEFESLFGRSSVEIVL 239 Query: 229 DPNDSLIRFPKEK----------DSRCNANKNLRNK---IPIDYFVMDQNAYKFLIQESF 275 D+ + P + N+ +DY ++ + Sbjct: 240 GQGDTALYDPHAAEALSRRIGAQPATSRFFIEPENRYLQALLDYVMVSPDLMARQPDWRI 299 Query: 276 SE-----ILYNEDDIKSRGKRLSDHCPISIDYD 303 + + ++ SDH P+++D + Sbjct: 300 WHPFDNPRCWRDPALREALLTASDHFPVTLDLE 332 >gi|291300710|ref|YP_003511988.1| exodeoxyribonuclease III Xth [Stackebrandtia nassauensis DSM 44728] gi|290569930|gb|ADD42895.1| exodeoxyribonuclease III Xth [Stackebrandtia nassauensis DSM 44728] Length = 265 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 81/306 (26%), Gaps = 71/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 + + + N+N + + ++ + AD+V LQE+ Sbjct: 2 LTVTTANVNGIRA---------------AARKGFVEWLSDTTADVVCLQEVRATDEQVPV 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +V + W + + + + +AV + Q D R Sbjct: 47 EVRDVDGWHMIVAP----------AADKGRAGVAVLSRETPARVQVGFGSEEFDVSGR-- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 L V++ G + V ++L S ++ + ++ L+ + Sbjct: 95 -----YLEVDLPG--VTVASLYLPSGETGTPRQDQKERFMAEFAEYLVALRKRA---EAD 144 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 VI GD+N + + D + + Sbjct: 145 NRHVVICGDWNIAHQEIDLKNWKANKKTAGFLPEEREWMTRVFDDIGYVDVARRLHPEGP 204 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + IDY + + + + R SDH Sbjct: 205 GPYSWWSYRGRAFDNDAGWRIDYHIATPGLAEAAK-------TAVVERAATHDARWSDHA 257 Query: 297 PISIDY 302 P+++ Y Sbjct: 258 PVTVTY 263 >gi|152983806|ref|YP_001346537.1| hypothetical protein PSPA7_1151 [Pseudomonas aeruginosa PA7] gi|150958964|gb|ABR80989.1| hypothetical protein PSPA7_1151 [Pseudomonas aeruginosa PA7] Length = 361 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 35/328 (10%), Positives = 91/328 (27%), Gaps = 68/328 (20%) Query: 21 AQKVRLVSWNINTLSEQ-----EGVSLWKNSVKRTTSD-----YTLLRQYAKNLDADIVF 70 Q +++++WNI L+ + + + +R T++ + + ++ D+V Sbjct: 52 GQALKVMTWNIQYLAGKRYIFWDDLPDATGPDQRPTAEDLAFTLDEVVRVIRDEQPDLVL 111 Query: 71 LQEMGSYNAVAKVFPKNTW-------------CIFYSTERLINHSKRDSNNDIHTAIAVR 117 LQE+ ++ + + + + A R Sbjct: 112 LQEIDDGSSATDDQDQLVLIQERINDLYPCSTQAYEWKSAFVPTPHIFGSVGRKQATLSR 171 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLEN 175 + ++ P G R A+ + G + VL+ + + Sbjct: 172 YRIDSAERRQLPQRDGGLFDRLFGPRPAILVSHLPIDGGGALAVLN----------ARFD 221 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-------------------- 215 L +Q + + + + + P+++ GD N Sbjct: 222 RPREQDDTLQRQVEMTRALLDELQARRTPWLLGGDLNLLPPGQYAYLLEPLRAPYRADSE 281 Query: 216 -NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 L +++ + + + +DY + Sbjct: 282 LALLSGRYPMVPSLEEAGGVDQMRWYTHFPNDPRV-HGPDRTLDYLFHSPSL-------- 332 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302 +S ++S+H P+S + Sbjct: 333 ---TRLEARVRRSDTLQISNHLPLSARF 357 >gi|298375698|ref|ZP_06985655.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_19] gi|298268198|gb|EFI09854.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_19] Length = 284 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 31/307 (10%), Positives = 87/307 (28%), Gaps = 77/307 (25%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNA 79 +K++++++N N L G L ++ D++ +QE + Sbjct: 30 EKLKIITYNTNGLRAAVGKGLP---------------EWLAQEQPDVLCIQETKLQPDQF 74 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 ++ F + + + + + + +A+ K + G Sbjct: 75 PSETFETLGYKSYLFSAQKKGY----------SGVAILTKQEP----DHIEYGMGIEKYD 120 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + + + ++ ++ S D ++ + + ++ + + Sbjct: 121 NEGRF-----LRADFGDVSIVSVYHPSGTSGDERQD-------FKMIWLEDFQKYVVELQ 168 Query: 200 ESLVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 +S ++ GD+N + + + + D Sbjct: 169 KSRPNLILCGDYNICHEPIDIHDPIRNAKNSGFLPEEREWMTRFLSAGFTDTFRFLNPDK 228 Query: 244 RCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + R IDY ++ N + + SDHC Sbjct: 229 QEYTWWSYRFNSRFKNKGWRIDYCMVSDNMKPKVKAAYILNDAVH-----------SDHC 277 Query: 297 PISIDYD 303 P ++ + Sbjct: 278 PAVLEIE 284 >gi|294013493|ref|YP_003546953.1| exodeoxyribonuclease III [Sphingobium japonicum UT26S] gi|292676823|dbj|BAI98341.1| exodeoxyribonuclease III [Sphingobium japonicum UT26S] Length = 265 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 37/313 (11%), Positives = 89/313 (28%), Gaps = 78/313 (24%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYN 78 +Q + + SWNIN + ++ ++ DI+ LQE + + Sbjct: 2 SQTLSIASWNIN----------------SVRARLDIVERFLTEESPDILCLQETKVVNDT 45 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 A +F + + + +H +A+ K ++ Sbjct: 46 FPAGLFRQRGYNHQ-----------VLNGQPMHHGVAILSKIPIREDDRLDWQANGEARH 94 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 V + ++ + + ++++ + + Q+ +L+ I Sbjct: 95 -------VGVRLDNG---VRIENVYVPAGGDVPD-----REVNPKFGQKLDFLERMIQWS 139 Query: 199 KE-SLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241 P ++ GDFN + + + + ND + K Sbjct: 140 STLEDKPTILTGDFNIAPMECDVWSHKQLLNVVSHTPIECEILARLQESNDWVDIGRKFY 199 Query: 242 DSRCNANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + +D+ M ++ + + + R Sbjct: 200 PAPQRLYTWWSYRARDWAESDRGRRLDHMWMTRDVAEKAVSHRVV-------EPIRGWSR 252 Query: 292 LSDHCPISIDYDF 304 SDH PI ++ F Sbjct: 253 PSDHVPIITEFAF 265 >gi|237719516|ref|ZP_04549997.1| exodeoxyribonuclease [Bacteroides sp. 2_2_4] gi|260174497|ref|ZP_05760909.1| exodeoxyribonuclease [Bacteroides sp. D2] gi|293370159|ref|ZP_06616719.1| exodeoxyribonuclease III [Bacteroides ovatus SD CMC 3f] gi|315922764|ref|ZP_07919004.1| exodeoxyribonuclease [Bacteroides sp. D2] gi|229451376|gb|EEO57167.1| exodeoxyribonuclease [Bacteroides sp. 2_2_4] gi|292634656|gb|EFF53185.1| exodeoxyribonuclease III [Bacteroides ovatus SD CMC 3f] gi|313696639|gb|EFS33474.1| exodeoxyribonuclease [Bacteroides sp. D2] Length = 253 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 30/302 (9%), Positives = 82/302 (27%), Gaps = 73/302 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+N L L ++ + DI+ LQE Sbjct: 1 MKIITYNVNGLRAAVSKGLP---------------EWLAQENPDILCLQETK-------- 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + ++ +A+ K + G R Sbjct: 38 LQPDQYPGEVFEALGYKSYLYSAQKKGYSGVAILTKQEP----DHVEYGMGMEAYDNEGR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + V+ ++ S D + + + + ++ + ++S Sbjct: 94 F-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEDFQKYVMELQKSRP 141 Query: 204 PFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD+N + + + + + Sbjct: 142 NLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLSAGYVDSFRTLCPEKQEYT 201 Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + R IDY ++ + L + + SDHCP+++ Sbjct: 202 WWSYRFNSRAKNKGWRIDYCMVSEPVRPLLKRAYILNEAVH-----------SDHCPMAL 250 Query: 301 DY 302 + Sbjct: 251 EI 252 >gi|190893818|ref|YP_001980360.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652] gi|190699097|gb|ACE93182.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652] Length = 267 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 75/307 (24%), Gaps = 68/307 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + +WNIN ++ Q DI+ LQE N + Sbjct: 2 SFSVTTWNIN----------------SVRLRMPIVEQLVLKHRPDILCLQETKVPNELFP 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 P + + +A+ + G D+ Sbjct: 46 AAPL---------RAMGYDHIIIHGQKGYHGVAIASRIPLTEDHRQDYCGVGDARH---- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + + E ++I + + ++ + D + T +P + + + E+ Sbjct: 93 ---ISAIFERGNRRIRLHNFYVPAG--GDEPDRTINPKFGHKLDFIEEM-KLLKANGEAN 146 Query: 203 VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD N + D + + L + + Sbjct: 147 TSAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETDGLLEVMRRGAWLDLMRQHVPASEK 206 Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ + L R SDH Sbjct: 207 LYTWWSYRAKDWEAADRGRRLDHIWSSSDLGPHLK-------RIEILKEARGWDRPSDHV 259 Query: 297 PISIDYD 303 P++ +D Sbjct: 260 PVTAHFD 266 >gi|304384068|ref|ZP_07366522.1| exodeoxyribonuclease III [Prevotella marshii DSM 16973] gi|304334784|gb|EFM01060.1| exodeoxyribonuclease III [Prevotella marshii DSM 16973] Length = 250 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 85/303 (28%), Gaps = 77/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VSWN+N L G S ++ + LDAD LQE Sbjct: 1 MKFVSWNVNGLRACVGKSFEES---------------FRMLDADFFCLQETKMQEG-QLN 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ ++ + A D R Sbjct: 45 LQFEGYEAYWNYAEKKGY----------SGTAIYTRHQPQSVSYGMGVEAHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E+ G +++ ++ + + Q + +I + ++ Sbjct: 91 ---IITLEMPG--FYLVTVYTPN-------SQDGLKRLAYRMQWEEDFLQYIKK-LDAKK 137 Query: 204 PFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCNA-------NK 249 P +I GD N + + + + N + Sbjct: 138 PVIICGDMNVAHEEIDIKNPKTNRHNAGFTDEERNKFTTLLSEGFTDTFRYKYPEQVRYS 197 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYFV+ +I + SDHCP+ + Sbjct: 198 WWSYRFQARAKNAGWRIDYFVVSNRLKPQIIDAKIHTAIL-----------GSDHCPVEV 246 Query: 301 DYD 303 + + Sbjct: 247 ELN 249 >gi|291523803|emb|CBK89390.1| exodeoxyribonuclease III [Eubacterium rectale DSM 17629] Length = 251 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 76/305 (24%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + ++D D +QE A Sbjct: 1 MKFISWNVNGLRACVQKGF---------------LDFFNSIDVDFFCIQE-SKLQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ KN + + D R Sbjct: 45 LDLPGYHQYWNYAEKKGY----------SGTAIFAKNEPLSVSYGIGIEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ + + + + L ++ Sbjct: 91 -----VITLEYDNFYLVTCYTPNSQNELKRLPYRMQWEDDFREYLKAL--------DAQK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N N + + F Sbjct: 138 PVVLCGDLNVAHNEIDLKNPKTNRKNAGFSDEERAKMTELLGSGFTDTFRYFYPDAEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ + L + + + SDHCP+ Sbjct: 198 SWWSYRFKAREKNAGWRIDYFITSKRINDKLKKAAIHTDVL-----------GSDHCPVE 246 Query: 300 IDYDF 304 +D +F Sbjct: 247 VDIEF 251 >gi|183179612|ref|ZP_02957823.1| hypothetical protein A51_B2651 [Vibrio cholerae MZO-3] gi|183013023|gb|EDT88323.1| hypothetical protein A51_B2651 [Vibrio cholerae MZO-3] Length = 869 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 47/373 (12%), Positives = 88/373 (23%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R ++ + LDADIV L E Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116 + + S R D I T + Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162 R K V++ Q + ++ + R + ++ G KI V Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652 Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211 H KS + + L Q + VI GD Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712 Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243 N D I + + Sbjct: 713 NSYGMEDPMLVLTDYTSEKYGKTIRAARNTYIAGVEQFGDAGAEIKHSYGYLNAVAMTHP 772 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290 + +D+ ++ + ++ + I E + Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKNKVVDATDWHINGAESTLFDYNDEFKGNLPKYNDQF 832 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 833 RASDHDPAVLELN 845 >gi|260888950|ref|ZP_05900213.1| hypothetical protein GCWU000323_00109 [Leptotrichia hofstadii F0254] gi|260861397|gb|EEX75897.1| putative endonuclease/exonuclease/phosphatase [Leptotrichia hofstadii F0254] Length = 244 Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 42/290 (14%), Positives = 90/290 (31%), Gaps = 59/290 (20%) Query: 24 VRLVSWNINTLSE---QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----- 75 ++ + +NI + + + + R+ + ++ DIV L E+ Sbjct: 1 MKFLLYNIRYGTGKYLNQPFKHMRGYLGRSVRHVYRIGKFINKYKPDIVGLVEVDLGSFR 60 Query: 76 --SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 S N + Y + + + A+ K + ++ + L Sbjct: 61 MYSKNQATLLGRITRNNNVYQYKYEEDSNYMKFPMVRKQGNAILSKKPVLREEFHYLDIG 120 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 L++E+ + I V +HL +Q L + Sbjct: 121 MKK-----------LIIEVETEDIVVFLVHLALGG-------------KTRQKQIVQLYN 156 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 ++ K+ P ++AGDFN + N ++ + P + Sbjct: 157 FVKNCKK---PVIVAGDFNVFWGEEEIEMFLQASNLQNINIRKEP--------TFPSWNP 205 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K +D+ + + S+ I +LSDH PI +D++ Sbjct: 206 KRELDFILCSKEIKVK----SYEVIQT----------QLSDHLPILVDFE 241 >gi|160900145|ref|YP_001565727.1| endonuclease/exonuclease/phosphatase [Delftia acidovorans SPH-1] gi|160365729|gb|ABX37342.1| Endonuclease/exonuclease/phosphatase [Delftia acidovorans SPH-1] Length = 1284 Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 49/351 (13%), Positives = 103/351 (29%), Gaps = 75/351 (21%) Query: 18 ASVAQKVRLVSWNINTLSE------------------QEGVSLWKNSVKRTTSDYTLLRQ 59 A A +++ S N+ + NS+ + Sbjct: 654 AVGAATLKIASANVLNFFNLTGATSGSSQVMFNTPLGNQQGIRGANSIAELDRQRAKIVA 713 Query: 60 YAKNLDADIVFLQEMGSY-----NAVAKVFPKNT----------WCIFYSTERLINHSKR 104 L AD+ L E+ + +A+ + + + + + Sbjct: 714 NLLGLGADVYGLMEVQNNGFGPGSAIQDLADALNASADKPAGAVYAVVKAPFTEAAGTVP 773 Query: 105 DSNND-IHTAIAVRKKNVR-VLQQSYPLLGAKDSFSRA--GNRRAVELLVEING--KKIW 158 + D I AI R V V + P + D+F+ + G R + + G ++ Sbjct: 774 GAGTDAITVAIVYRSDRVTPVGSAAAPNVSTYDAFNASIGGARVPIAQTFAVGGSTEQFT 833 Query: 159 VLDIHLKS------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGD 210 ++ H KS + + + + + AQ L +W+ + + V+ GD Sbjct: 834 LVVNHFKSKGSVLGGAGNADVLDGQGANNAARVKTAQQLSNWLATRPTGVTSPHVVLVGD 893 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN T++ + + +D+ ++ + + Sbjct: 894 FNAYAKEDPI-----TTLESGGYVKVSQGL------SYAFDGMWGSLDHVLVSTSLQPSV 942 Query: 271 IQESFSEILYNEDDIKSRG-----------------KRLSDHCPISIDYDF 304 +E I E ++ R SDH PI + +F Sbjct: 943 GREVKWAINAEEPEVLDYNVEFKSLDQQASFYAPTAYRSSDHNPILLGLNF 993 >gi|21224501|ref|NP_630280.1| hypothetical protein SCO6176 [Streptomyces coelicolor A3(2)] gi|4008541|emb|CAA22510.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)] Length = 276 Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 37/294 (12%), Positives = 83/294 (28%), Gaps = 59/294 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA- 81 +R+ ++NI+ + +GV D + LDAD++ LQE+ + Sbjct: 20 PLRIATYNIHAGAGSDGVF-----------DLDRQAAALRALDADVIGLQEVDVHWGARS 68 Query: 82 -------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 ++ + + ++ ++ + +AV + ++ + Sbjct: 69 QGLDVAGELARRLGMRVSFAPIYSLDPVTAGEPRREY-GVAVLSRFPVRSATNHEITRLS 127 Query: 135 DSFSRAGNRRA---VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 A E+ +++ G + V HL Y ++ Q Sbjct: 128 TQDENPLPAPAPGFGEVTLKVRGVPVQVFVTHL-----------DYRADPAVRRAQVADT 176 Query: 192 KDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + + +++ + GDFN + WK + + + Sbjct: 177 RRIMARERAELPGAHQFLLGDFNAEPA-APELAPLWKELSDAGAGTPATYPAQAPVK--- 232 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY ++ SDH P+ D Sbjct: 233 ------RIDYVTAGKDVRIRRTAV-------------PEEPAASDHRPVVADVS 267 >gi|113969313|ref|YP_733106.1| endonuclease/exonuclease/phosphatase [Shewanella sp. MR-4] gi|113883997|gb|ABI38049.1| Endonuclease/exonuclease/phosphatase [Shewanella sp. MR-4] Length = 377 Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 36/365 (9%), Positives = 83/365 (22%), Gaps = 78/365 (21%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFL 71 + +++ + N+ E S + + DIV Sbjct: 10 SSANTTQSNIKIATVNLFNFIEPPSAFYDFENIYSHGQWQKKCQWFSELLNQHHPDIVGF 69 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV---LQQSY 128 QE+ S + ++ ++ A+A R + V + + Sbjct: 70 QEVFSPEPLRQLA-LQQGLTHFAVVDSATLVSDYIYQSPVVALASRFPILEVHAIEPEVH 128 Query: 129 PLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFL----------------- 170 + S + +R+ + V + +H KS Sbjct: 129 LVAAMGLSSEFSFSRKVLRATVAVPQIGPCDCYVVHFKSKRPGLALEPHPLGLSLNAPSD 188 Query: 171 ----------DSLENTYSPSCSLLSQQAQWL-KDWITQKKESLVPFVIAGDFNRK----- 214 S +A L + +++ + P ++ GDFN Sbjct: 189 LKLHAETKLLTEQALGRWASTMQRGAEAALLFHAILARRQSAKYPVILMGDFNDSLSLGA 248 Query: 215 ----------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN------------------ 246 ++ + F + Sbjct: 249 LDALTLQGEALHSNDIKAAGLGHLSDAALAQVFAHYRLQDAYELFIEANLADNAVHYREH 308 Query: 247 ---ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKRLSDHCP 297 + +DY ++ + + Y D R +DH P Sbjct: 309 RSPTHYYGPKGSVLDYVLLSNEFDASDSRSLAQVVDYQTCDRHLVRPEYERDAYSTDHAP 368 Query: 298 ISIDY 302 + ++ Sbjct: 369 VIVEL 373 >gi|254186690|ref|ZP_04893206.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei Pasteur 52237] gi|157934374|gb|EDO90044.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei Pasteur 52237] Length = 338 Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 75/285 (26%), Gaps = 56/285 (19%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 +++R+ ++NI+ T S + L AD++ LQE+ Sbjct: 47 QPRTRELRIATYNIHG-----------GLGAWTASAAERIAVVLDELRADVIALQEVPLG 95 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A + T AV + + L SF Sbjct: 96 GARGADV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----SF 147 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R A++ +E + V+ HL S + S Q L + Sbjct: 148 GNREPRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LAA 191 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 +P ++ GD N + F + + F + R + Sbjct: 192 FDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS--L 240 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D + ++L+ + DH P+ Sbjct: 241 DRIWVHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 275 >gi|257886665|ref|ZP_05666318.1| AP endonuclease [Enterococcus faecium 1,141,733] gi|257895240|ref|ZP_05674893.1| AP endonuclease [Enterococcus faecium Com12] gi|293377228|ref|ZP_06623433.1| exodeoxyribonuclease III [Enterococcus faecium PC4.1] gi|257822719|gb|EEV49651.1| AP endonuclease [Enterococcus faecium 1,141,733] gi|257831805|gb|EEV58226.1| AP endonuclease [Enterococcus faecium Com12] gi|292644089|gb|EFF62194.1| exodeoxyribonuclease III [Enterococcus faecium PC4.1] Length = 250 Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 75/303 (24%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + + LDAD LQE A Sbjct: 1 MKFISWNVNGLRAIVNKNF---------------LEVFHELDADFFCLQETK-LQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + + D+ R Sbjct: 45 LDLPGYYQYWN----------YAERKGYSGTAIFAKEPALNATYGMGIDIHDTEGRL--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +++ + + + + L + Sbjct: 92 ------ITLEYSDFFLVTCYTPNSQSELKRLDYRLEWEEAFYNYLENL--------KKQK 137 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + N + F ++ Sbjct: 138 PVIVCGDLNVAHQTIDLKNWKTNQKNAGFTPEERAALSRLLDNGFIDTFRYFYPTQEGVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ ++ L SDHCP+ Sbjct: 198 SWWNYRFNSRKNNAGWRIDYFLTSKDLAPRLADAKIHT-----------DIMGSDHCPVE 246 Query: 300 IDY 302 +D Sbjct: 247 LDL 249 >gi|212530796|ref|XP_002145555.1| endonuclease/exonuclease/phosphatase family protein [Penicillium marneffei ATCC 18224] gi|210074953|gb|EEA29040.1| endonuclease/exonuclease/phosphatase family protein [Penicillium marneffei ATCC 18224] Length = 298 Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 89/295 (30%), Gaps = 26/295 (8%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+++ NI + + K +R L +++ V LQE+ Sbjct: 8 SLRILTHNIRY-ATSQPFRGEKPWAERQQLLLNELVYSTRHIAESFVCLQEVLHVQLNGI 66 Query: 83 VFP-------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + ++ W + S A V P +K Sbjct: 67 LAGLNQSAKAEDQWAYIGVGRDDGETNGEYSPIFYKPATWQLHHWETVWLSETPEKPSK- 125 Query: 136 SFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 S+ A R + + GK + VL+ HL D + + ++ + + Sbjct: 126 SWDAASTRIVTIAVFKHQATGKFLLVLNTHL-----DDQGSRSRFEAARII---LRKIDG 177 Query: 194 WITQKKESLVP-FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-PKEKDSRCNANKNL 251 ++ E + V+AGDFN + + DS +E+ Sbjct: 178 YLDGSYEETISGVVLAGDFNSEETQEAYQVLTGEDSVLVDSQKLTKTEERYGNEITWTGF 237 Query: 252 RNKI----PIDYFVMDQNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPISID 301 + IDY ++ K + + + Y G SDH + +D Sbjct: 238 GYEDEPQKRIDYILLGPVDNKSSVPHPWESLGYAVLASRFDDGVWNSDHRAVVVD 292 >gi|256784304|ref|ZP_05522735.1| hypothetical protein SlivT_07438 [Streptomyces lividans TK24] Length = 276 Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 37/294 (12%), Positives = 83/294 (28%), Gaps = 59/294 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA- 81 +R+ ++NI+ + +GV D + LDAD++ LQE+ + Sbjct: 20 PLRIATYNIHAGAGSDGVF-----------DLDRQAAALRALDADVIGLQEVDVHWGARS 68 Query: 82 -------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 ++ + + ++ ++ + +AV + ++ + Sbjct: 69 QGLDLAGELARRLGMRVSFAPIYSLDPVTAGEPRREY-GVAVLSRFPVRSATNHEITRLS 127 Query: 135 DSFSRAGNRRA---VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 A E+ +++ G + V HL Y ++ Q Sbjct: 128 TQDENPLPAPAPGFGEVTLKVRGVPVQVFVTHL-----------DYRADPAVRRAQVADT 176 Query: 192 KDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + + +++ + GDFN + WK + + + Sbjct: 177 RRIMARERAELPGAHQFLLGDFNAEPA-APELAPLWKELSDAGAGTPATYPAQAPVK--- 232 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY ++ SDH P+ D Sbjct: 233 ------RIDYVTAGKDVRIRRTAV-------------PEEPAASDHRPVVADVS 267 >gi|229124614|ref|ZP_04253799.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201] gi|228658954|gb|EEL14609.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201] Length = 337 Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 45/322 (13%), Positives = 106/322 (32%), Gaps = 60/322 (18%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T + + + +N ++D Sbjct: 35 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 94 Query: 71 LQEMG----------SYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKK 119 LQE+ + + K P + + ++ K Sbjct: 95 LQEVDIKSMRSFDVNGHEFLKKGLPNYVSSFGKNYDTKWVPVPITSPMGYAEAGLSTFSK 154 Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176 + + L G + R + R VE + +N GK + ++++HL + Sbjct: 155 YTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---------- 204 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 Y + QQ ++LK ++ + E ++ GD+N+ ++ + +D + P+ + Sbjct: 205 YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPDWLVEL 264 Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280 D + ID F++ N ++ ++ + Sbjct: 265 PKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 322 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 SDH P+S + Sbjct: 323 EN----------SDHNPVSAVF 334 >gi|67924378|ref|ZP_00517808.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Crocosphaera watsonii WH 8501] gi|67853771|gb|EAM49100.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Crocosphaera watsonii WH 8501] Length = 262 Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 97/306 (31%), Gaps = 71/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ +WN+N + + + N D++ LQE + + Sbjct: 1 MKIATWNVN----------------SIRTRQPHVIDWLTNNSIDVLCLQETKVIDKDFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F + + + ++ N AI R+ ++ ++G + + S Sbjct: 45 QPFEELGYHTYIYGQKAYN----------GVAIFSRQPMTDIITGFTDIVGEEKAQSFDE 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKE 200 +R + +++ I ++++++ + L S + Y Q Q LK ++ + Sbjct: 95 QKRIISGVID----DIRIINVYVPNGASLGSEKYEYK------LQWFQVLKAYLDDLILK 144 Query: 201 SLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 I GDFN ++ + + I F K Sbjct: 145 EAREVCICGDFNIALDDKDIYNSKGKEKHIMSSPVERETLQNILTIGLKDAFRKFTTEGG 204 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + ID+ + Y+ I + ++ + SDH Sbjct: 205 H-FSWWDYRSGGFQRNRGWRIDHLYLTHKLYEKAINCTIDIEPRKQE-------KPSDHT 256 Query: 297 PISIDY 302 P+ ++ Sbjct: 257 PVILEI 262 >gi|282858966|ref|ZP_06268104.1| exodeoxyribonuclease III [Prevotella bivia JCVIHMP010] gi|282588246|gb|EFB93413.1| exodeoxyribonuclease III [Prevotella bivia JCVIHMP010] Length = 249 Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 81/303 (26%), Gaps = 79/303 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L G + ++ LDAD LQE Sbjct: 1 MKFISWNVNGLRACVGKNFKED---------------FAALDADFFCLQETKMQEG-QLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ ++ ++ A+ K+ + + + D R Sbjct: 45 LSFPGYESYWN----------YADKKGYSGTAIFTKHKPLTVTTGIGIDEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + + Q + ++ K + Sbjct: 91 -----VITLEMDDFYLVTVYTPN-------SQDELKRLAYRMQWETDFQAYL-HKLDEHK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + N F + Sbjct: 138 PVIVCGDMNVAHEEIDLKNPKTNHHNAGFSDEEREKMTILLNNGFTDTFRYLYPEQV-TY 196 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ L ++ SDHCP+ Sbjct: 197 SWWSYRFKAREKNTGWRIDYFLISNRLRDRLKDAKIHTEIF-----------GSDHCPVE 245 Query: 300 IDY 302 + Sbjct: 246 LTL 248 >gi|160884274|ref|ZP_02065277.1| hypothetical protein BACOVA_02252 [Bacteroides ovatus ATCC 8483] gi|156110013|gb|EDO11758.1| hypothetical protein BACOVA_02252 [Bacteroides ovatus ATCC 8483] Length = 253 Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 30/302 (9%), Positives = 82/302 (27%), Gaps = 73/302 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+N L L ++ + DI+ LQE Sbjct: 1 MKIITYNVNGLRAAVSKGLP---------------EWLAQENPDILCLQETK-------- 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + ++ +A+ K + G R Sbjct: 38 LQPDQYPGEVFEALGYKSYLYSAQKKGYSGVAILTKQEP----DHVEYGMGMEAYDNEGR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + V+ ++ S D + + + + ++ + ++S Sbjct: 94 F-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMAWLEDFQKYVMELQKSRP 141 Query: 204 PFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD+N + + + + + Sbjct: 142 NLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLSAGYVDSFRTLCPEKQEYT 201 Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + R IDY ++ + L + + SDHCP+++ Sbjct: 202 WWSYRFNSRAKNKGWRIDYCMVSEPVRPLLKRAYILNEAVH-----------SDHCPMAL 250 Query: 301 DY 302 + Sbjct: 251 EI 252 >gi|110680975|ref|YP_683982.1| hypothetical protein RD1_3833 [Roseobacter denitrificans OCh 114] gi|109457091|gb|ABG33296.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114] Length = 227 Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 78/281 (27%), Gaps = 61/281 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK- 82 +++ S+NI K D + +DAD+V LQE Sbjct: 1 MKIASYNIR-----------KAVGLDWRRDPDRVADVLLEIDADVVVLQEADRRTGTRAG 49 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 V P + S+ AI +R + + L Sbjct: 50 VLPLERLEDELGYLLPDFSVRALSHGWHGNAILLRSRYDSHAARRIDLPSID-------P 102 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R AV + + +I + + L +Q L+ + + Sbjct: 103 RGAVSVQISDPCVEIIGVHLGLTPG---------------TRRKQVDVLRQVLQ---DRP 144 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 P ++AGDFN + K +D + R + +D FV+ Sbjct: 145 HPVILAGDFN---------EWNLKRLDFGTDAQVVSPGL-----SFHAARPRAALDRFVL 190 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + R SDH PI I D Sbjct: 191 GPG--VRVVSSHVHKSNL--------AARASDHLPIVITVD 221 >gi|329955242|ref|ZP_08296199.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides clarus YIT 12056] gi|328526241|gb|EGF53260.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides clarus YIT 12056] Length = 370 Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 31/305 (10%), Positives = 78/305 (25%), Gaps = 72/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-----GSYN 78 + + ++N++ + T + +Y + D++ QE + + Sbjct: 114 LTVATYNVHNFG-----------NEITGYSCKEIARYMRQQHVDVLCFQEFGGNKHFTAD 162 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 ++ + + + + + +R + YPL G + Sbjct: 163 SLRRALSHWQYALIPADDS------------------IRGLLPIAVFSRYPLTGGRFITY 204 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE--------NTYSPSCSLLSQQAQW 190 + ++ + I +L+ HL++ + + + + A+ Sbjct: 205 PHSSNCSMLCDIVAGTDTIRLLNNHLQTTGVSRNRKKWERELTTDNTRREAQAVQDAAET 264 Query: 191 LKD-----------WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 L + + P ++ GDFN + F Sbjct: 265 LHENFVKRAAQTDSICHLAIAAPHPVLVCGDFNSLPSSYTYRRL------SGFLEDGFKT 318 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + + IDY D SDH P+ Sbjct: 319 GGHGYMYTYRYGKRMLRIDYAFHSPELEC-------------IDYYSPDLDLCSDHNPVI 365 Query: 300 IDYDF 304 + Sbjct: 366 FTVKY 370 >gi|320104403|ref|YP_004179994.1| endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC 43644] gi|319751685|gb|ADV63445.1| Endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC 43644] Length = 356 Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 90/358 (25%), Gaps = 79/358 (22%) Query: 2 IRKYVLALVFFLVPCTASV---------------AQKVRLVSWNINTLSEQEGVSLWKNS 46 + +L+ F V + +R+V+WN + L + V Sbjct: 19 MACLILSGFFAAVASVPPAQARQEAVPPQTQPAVGRPIRIVTWNCDALFTTDEVK----- 73 Query: 47 VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWC-----IFYSTERLINH 101 R SD+ + D++ LQE+ S + V W + N Sbjct: 74 --RRKSDF---INMVAEVQPDVILLQEVTSQAVLEAVRDVIGWTKADGSPADAVCSSFNP 128 Query: 102 SKRDSNNDIHTAIAVRKKNVR----------------VLQQSYPLLGAKDSFSRAGNRRA 145 N + + R V V+++ + + R Sbjct: 129 DHTQEYNSLEVGVISRFPIVEAVEFDTELDNPPSERQVVERQLTIPSRLNPPPNFRGRGF 188 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + + + + ++HLKS ++ + A L + Sbjct: 189 LRVRTSSPD--LVLYNVHLKSSRGQFGRQDVNNAIQREYVMGALALDAAAIRVAFPNHDV 246 Query: 206 VIAGDFN------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK---------- 249 +I GDFN K+ + + D C Sbjct: 247 IIGGDFNVGITDRDKLANSWEVEAARRKGQAYDRTHALLTGLIDGCRFRPLCEGVGETYV 306 Query: 250 ----NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ID +D +R SDH P+ ++ Sbjct: 307 KGANRFKGAGAIDNLYVDGPHRDRFRPA-----------KPARSSYGSDHLPVWTEFT 353 >gi|37993822|gb|AAR06990.1| sphingomyelinase [Bacillus cereus W] gi|37993843|gb|AAR07004.1| sphingomyelinase [Bacillus anthracis] gi|37993846|gb|AAR07006.1| sphingomyelinase [Bacillus anthracis] gi|37993848|gb|AAR07007.1| sphingomyelinase [Bacillus anthracis] Length = 252 Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 80/230 (34%), Gaps = 26/230 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230 Q + ++D+I + + + GD N N +KT+ Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHA 247 >gi|76808611|ref|YP_333756.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1710b] gi|237812555|ref|YP_002897006.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei MSHR346] gi|254179545|ref|ZP_04886144.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei 1655] gi|254189064|ref|ZP_04895575.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei Pasteur 52237] gi|76578064|gb|ABA47539.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei 1710b] gi|157936743|gb|EDO92413.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei Pasteur 52237] gi|184210085|gb|EDU07128.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei 1655] gi|237503102|gb|ACQ95420.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei MSHR346] Length = 286 Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 85/308 (27%), Gaps = 52/308 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 +RL+SWN+ + G T D A+ L D D++ QE+ Sbjct: 1 MRLISWNVQWGRDANG-----------TVDLARTVDAARGLGDFDVLCAQELTRGFHALP 49 Query: 75 --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 S + A++ + + A+ + + L Sbjct: 50 GGPSGDQYAELAALLPGYAVFDAIGVDLPPLEPGAPRRQFGNALATRLPVERALRHALPW 109 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + + + R A+E+ + + V+ HL+ + + L ++A Sbjct: 110 PASAAAPSMPRCALEVTLRAPFGPLRVVVTHLEYYSA--QQRLAQVDALRRLHREAAAHA 167 Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF------ 237 + PF ++ GDFN D + + Sbjct: 168 RASAPPETPASPFAPSARAADAIVCGDFNSAYRSDAYQRFLAPFPDAPRFVDAWLARHPG 227 Query: 238 --PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 P + + + D+ + + L + R SDH Sbjct: 228 KTPPMTAGVYDTAQWSEGPMTCDFAFVTDTLVRRLSRCEI-----------DGTVRASDH 276 Query: 296 CPISIDYD 303 PI ++ Sbjct: 277 QPIVLELS 284 >gi|308209127|gb|ADO20908.1| exodeoxyribonuclease-2 [Saccharopolyspora spinosa] Length = 266 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 76/303 (25%), Gaps = 62/303 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ SWN+N + L + + D++ +QE+ Sbjct: 1 MRIASWNVN----------------SVGARLPKLLDWLGTAEPDVLCVQELKCAADA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +AV + + L A Sbjct: 42 -------FPFDEVGELGYKVAAHGTGRWNGVAVLSRVGIDEVRHGLLDEPGFQVDGAMFE 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + + Y + L+ + ++ + Sbjct: 95 TQEPRAIGATCGGVRVWSVYVPNGREVGHPHYAYK------LRWLDALRATVIEEMAADR 148 Query: 204 PFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRFPKEKDSRCN----------ANK 249 PF + GDFN D + N+ K Sbjct: 149 PFAVLGDFNICPTDADVWDIAGFADSTHVRKNEGKALAALAKPGLARVYRRAMKYDIPFT 208 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + ID ++ + D +GK SDH P+ + Sbjct: 209 YWDYRALRFPNNQGMRIDLVYGNEKFTGAVTDSYV-------DREARKGKGTSDHAPVVV 261 Query: 301 DYD 303 D D Sbjct: 262 DLD 264 >gi|315498086|ref|YP_004086890.1| endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB 48] gi|315416098|gb|ADU12739.1| Endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB 48] Length = 351 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 47/350 (13%), Positives = 107/350 (30%), Gaps = 63/350 (18%) Query: 5 YVLALVFFLVPCTASVAQK----VRLVSWNINTLS--------EQEGVSLWKNSVKRTTS 52 ++L+ +F LV + AQ + ++++N+ + N+ ++ Sbjct: 8 WLLSGLFSLVVAGGAAAQTADPRLTVMTYNVENFFDAEDDPRMPNGSSNEVVNTPAWVSA 67 Query: 53 DYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKV---FPKNTWCIFYSTERLINHSKRD 105 T + + + D D++ L E+ S ++ + + + ++ Sbjct: 68 KATNVARVIERFDFGRGPDVLVLTEVESQASLEAIKGALNNTGAAYVTAVLLDADPNRPA 127 Query: 106 SNNDIH-TAIAVRKKNVR---VLQQSYPLLGAKDSFSRAG------NRRAVELLV-EING 154 D +A+ K +S+P+ + S ++ R +++ + +G Sbjct: 128 PKPDQRGIKVALLSKLPLANGFTPKSFPVDLTRTSDCKSRDGSAGTTRDLLQVDLALPDG 187 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 K + + HL S + + A + K + AGDFN Sbjct: 188 KTLTIFGGHLPSGGNP-----------RICREIAAQTIATLATKLPQSHVILAAGDFNFN 236 Query: 215 --INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-KNLRN-------------KIPID 258 + + L + S+ K ID Sbjct: 237 CAPDERKGLAAAFTGWVLPAQLDNACRGNGSQFYGREKTWSYLDVITQKASGASQAWAID 296 Query: 259 -----YFVMDQNAYKFLIQESF-SEILYNEDDIKSRGKRLSDHCPISIDY 302 + D ++ ++ + + +G SDH PI+ID Sbjct: 297 PKSFRTVLTDNEQLQWDDRDQVMRPKAFRFNAETGKGSGTSDHWPIAIDL 346 >gi|229086305|ref|ZP_04218483.1| Exodeoxyribonuclease [Bacillus cereus Rock3-44] gi|228697000|gb|EEL49807.1| Exodeoxyribonuclease [Bacillus cereus Rock3-44] Length = 252 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 80/301 (26%), Gaps = 77/301 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + +Y + D DI LQE+ + + Sbjct: 1 MKFISWNVNGLRAVIAKGGF--------------IEYLEETDTDIFCLQEIKLQSGQVDL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ + + + ++ A+ K + + D R Sbjct: 47 NPEGYYVYW-----------NYAVKKGYSGTAILTKKEPLSVTYGLGIEEHDQEGRL--- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + ++L ++ + + + L + Sbjct: 93 ------ITLEFEDFYMLTLYTPNAKRGLERLDYRMKWEEDILSYITKL--------DKKK 138 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + I + + R A Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKTNRKNPGFSDQERKRFTQILDEGFIDTYRYLYPDREGAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYF++ + ++ + + SDHCP+ Sbjct: 199 SWWSYRMNARAKNIGWRLDYFIVSERLKDKIVDAKINSEV-----------MGSDHCPVE 247 Query: 300 I 300 + Sbjct: 248 L 248 >gi|73670688|ref|YP_306703.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina barkeri str. Fusaro] gi|72397850|gb|AAZ72123.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina barkeri str. Fusaro] Length = 258 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 34/311 (10%), Positives = 74/311 (23%), Gaps = 81/311 (26%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYN 78 + L+SWN+N L + DIV +QE + Sbjct: 2 SGNYNLISWNVNGLRAVMKKGF---------------LELLLEQKFDIVCIQETKVSPDK 46 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + ++ + +S + +KK +++ G Sbjct: 47 LPREAKNIPGYYNYFVSAEKNGYSG--------VGLFSKKKPLKLE------TGMGIEKF 92 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R + + + +++I+ + + D+ Sbjct: 93 DKEGRF-----LRADFEDFTLMNIYFPNG-------KASLERLEYKMSFYEAFLDYANSL 140 Query: 199 KESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 K VI GD N K + + + + Sbjct: 141 KAEGKRLVICGDVNTAHKELDLARPKQNETISGFLPEERAWMDKFL--AAGYLDTFRMFN 198 Query: 243 SRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + +DYF + + + S Sbjct: 199 PEGGNYSWWSMRTGARKRNVGWRLDYFFVSEKLRDNVKSAPI-----------YSEIMGS 247 Query: 294 DHCPISIDYDF 304 DHCP+ ++ +F Sbjct: 248 DHCPVGLELEF 258 >gi|223935760|ref|ZP_03627676.1| exodeoxyribonuclease III Xth [bacterium Ellin514] gi|223895768|gb|EEF62213.1| exodeoxyribonuclease III Xth [bacterium Ellin514] Length = 250 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 78/303 (25%), Gaps = 76/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + D DI+ LQE + Sbjct: 1 MKLISWNVNGLRAVLKKNF---------------LDFLAKEDPDILCLQETKCTPDDVEQ 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 T+ +++T + + + A+ K + D R Sbjct: 46 LWPATFTTYWNTAQKKGY----------SGTAIFTKAKPISVSLGINCPEHDMEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++++++ + + + L+ Sbjct: 92 -----VLTSEYPEFFLVNVYVPNSKRELTRLAYRQQWDCDFLSYLKKLEK--------KK 138 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249 P + GD N + + + I +E + Sbjct: 139 PVIFCGDLNVAHTEIDLANPKANVKNHGFTPEERAGFSTVIKAGFIDTFREFEKGGGHYS 198 Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 IDYF++ L + SDHCP+ I Sbjct: 199 WWSPMGGARSRNVGWRIDYFLISSALRPRLKRAFIQ-----------PNIPGSDHCPVGI 247 Query: 301 DYD 303 + Sbjct: 248 ELS 250 >gi|167034007|ref|YP_001669238.1| exodeoxyribonuclease III Xth [Pseudomonas putida GB-1] gi|166860495|gb|ABY98902.1| exodeoxyribonuclease III Xth [Pseudomonas putida GB-1] Length = 265 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 76/304 (25%), Gaps = 70/304 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + +++ ++NIN S L + + DI LQE Sbjct: 2 KALKIATFNING----------------IRSRLPALLAWLEREQPDIACLQE-------- 37 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + +A+ ++ L+ L G +D Sbjct: 38 --LKAANQQFPREAIEAAGYGCLYQGQPSWNGVAILARDSEPLEVRRGLPGMQDDQQSRY 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 AV ++ V ++L + + Y + + L S Sbjct: 96 LEAAVHGVL--------VGCLYLPNGNPQPGPKFDYK------LRWFECLIKHAQTLHVS 141 Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246 P V+AGDFN L ++ + + + Sbjct: 142 RHPTVLAGDFNVVPTDLDIYSPRSWLKDALLQPESRACFEALLAQGWVDAVRHLYPEQRI 201 Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ +++ +L D + SDH P+ Sbjct: 202 YTFWDYFRNHWARNAGLRIDHLLLNPGLSPYLKGAGV-------DAWVRNEAKASDHAPV 254 Query: 299 SIDY 302 I Sbjct: 255 WIQL 258 >gi|83941780|ref|ZP_00954242.1| exodeoxyribonuclease III, putative [Sulfitobacter sp. EE-36] gi|83847600|gb|EAP85475.1| exodeoxyribonuclease III, putative [Sulfitobacter sp. EE-36] Length = 262 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 29/306 (9%), Positives = 67/306 (21%), Gaps = 71/306 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L +WNIN ++ + D++ LQE S Sbjct: 2 PFTLATWNIN----------------SVRLREPIVLKLLAEHGPDVLCLQECKSPVDK-- 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + +A+ + V + Sbjct: 44 -------IPTAAFIEAGYTHMVARGQKGYNGVAILSRLPLVDAGDQDFATLGHARH---- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + +E + V + ++ + D + + ++DW K Sbjct: 93 ---IAAKLENG---VTVHNFYVPAG--GDVPDREVNEKFGQKLDYLADMRDWFHGDKPEK 144 Query: 203 VPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N D + + ++ + N Sbjct: 145 S--ILVGDLNIAPREDDVWDHKKLLKVVSHTPIEVEKLAETQDAGGFVDVTRQDIPQGNL 202 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + ++ SDH P Sbjct: 203 YSWWSYRAKDWDAADKGRRLDHVWATPDISGAAHSS-------RVLRDARGWEKPSDHAP 255 Query: 298 ISIDYD 303 + +D Sbjct: 256 VFATFD 261 >gi|302533764|ref|ZP_07286106.1| large secreted protein [Streptomyces sp. C] gi|302442659|gb|EFL14475.1| large secreted protein [Streptomyces sp. C] Length = 613 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 39/331 (11%), Positives = 84/331 (25%), Gaps = 69/331 (20%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A ++ + ++N+ L + + N K ++ DIV L+E+ Sbjct: 304 AQSPGELAVATYNVENLDPSDPQEKFDNLAKAVVTNLA---------SPDIVALEEIQDD 354 Query: 78 NAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 N K + S N + +I Sbjct: 355 NGAKNDGTVSAEQTLTKFTEAIKAAGGPAYQW-RSIAPENNKDGGEPGGNIRQVFLFNPA 413 Query: 120 NVRVLQQS---------------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 V ++ P + + A +R+ + G+ ++ Sbjct: 414 RVSFTDRAAGDAVTATGVTTERGKAALTHSPGRIDPANPAWADSRKPLAGEFLFRGRTVF 473 Query: 159 VLDIHLKSFCFLD----SLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFN 212 V+ H S + + S QAQ + ++ Q + + GD N Sbjct: 474 VIANHFGSKGGDEGLTSHHQPPVRKSEEKRLLQAQAVNGFVKQLLAVDKNAAVLAVGDIN 533 Query: 213 RKINYLGNNDDFWKTIDPND-SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 K ++ + + N +D + + F Sbjct: 534 DF-----EFSGTAKALEDGGALYSAIKSLPKAERYSYVYQGNAQVLDQILTSPSIKNFAY 588 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + SDH P + + Sbjct: 589 DSVHINAEFSAQN--------SDHDPQVLRF 611 >gi|187933475|ref|YP_001885926.1| exodeoxyribonuclease III [Clostridium botulinum B str. Eklund 17B] gi|187721628|gb|ACD22849.1| exodeoxyribonuclease III [Clostridium botulinum B str. Eklund 17B] Length = 251 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 34/300 (11%), Positives = 80/300 (26%), Gaps = 78/300 (26%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +L+SWN+N L K +ADI +QE + Sbjct: 3 KLISWNVNGLRACVKKGF---------------IDILKESNADIFCVQESKLQEGQIDLN 47 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + + + + ++ AV K + LG R Sbjct: 48 LEGYYDYW-----------NYAEKKGYSGTAVFSKEKPLNIS----LGIGIEEHDKEGR- 91 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ + ++ ++++++ + + + + L P Sbjct: 92 ----VLTLEFEEFYLVNVYTPNSQQKLARIDYRMAWENDFRSYLNELNK--------AKP 139 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GD N + + + + + + + A Sbjct: 140 VIVCGDLNVAHKEIDLKNPKNNRNNAGFSDEEREKFGELLKSGFIDTYRYFYPDKEGAYS 199 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF++ ++ L+ + SDHCP+ + Sbjct: 200 WWSYRFNARANNAGWRIDYFLVSKDFEDRLVDAKIHTQI-----------EGSDHCPVEL 248 >gi|82776137|ref|YP_402484.1| hypothetical protein SDY_0813 [Shigella dysenteriae Sd197] gi|309786554|ref|ZP_07681177.1| endonuclease/Exonuclease/phosphatase family protein [Shigella dysenteriae 1617] gi|81240285|gb|ABB60995.1| conserved hypothetical protein [Shigella dysenteriae Sd197] gi|308925617|gb|EFP71101.1| endonuclease/Exonuclease/phosphatase family protein [Shigella dysenteriae 1617] Length = 253 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 81/288 (28%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ NI+ LR + + ADIV QE+ + V Sbjct: 9 SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCQQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P + F + + + + + H AV + S Sbjct: 59 LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A R + + GK I V+ +HL + Q L +W Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLALR-------------EAHRQAQLAMLAEW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + P ++AGDFN + +D F + Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + LSDH P+S + Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251 >gi|168036056|ref|XP_001770524.1| predicted protein [Physcomitrella patens subsp. patens] gi|162678232|gb|EDQ64693.1| predicted protein [Physcomitrella patens subsp. patens] Length = 363 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 89/304 (29%), Gaps = 64/304 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 V+L+SWN+N L ++ + + A D D++ LQE + + Sbjct: 97 VKLLSWNVNGLRALLKEKGAEHEQGSM------IARLAAREDFDVLCLQETK----LQEK 146 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ ++ ++ A+ + + Q + D R Sbjct: 147 DVADIRKSLLASHE-VSLWGCSTSKLGYSGTAIISRIKPISVQYGLGIPNHDQEGRL--- 202 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSL-ENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + + + ++ + LS + L+ Sbjct: 203 ------ITCEFDTFYFVVSYVPNSGAKLERLAYRTQEWDVALSSHLRELEK--------K 248 Query: 203 VPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N + ND +KT + + +++ A Sbjct: 249 KPVILTGDLNCAHEDIDINDPAGNRKSAGFTDEERESFKTNFLDHGFVDTFRKQHPNAVA 308 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +DYF++ + + + D SDHCPI Sbjct: 309 YTYWGYRTASRPKNKGWRLDYFLVSGSLSENVH-----------DSYTIPDVGGSDHCPI 357 Query: 299 SIDY 302 ++ Sbjct: 358 ALIL 361 >gi|145355749|ref|XP_001422113.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582353|gb|ABP00430.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 273 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 31/301 (10%), Positives = 76/301 (25%), Gaps = 60/301 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +VSWN+N L ++ +K+ L + DAD++ LQE Sbjct: 1 LSVVSWNVNGL---------RSLLKKAPRALDELA---RRTDADVLVLQETKLGADGRGA 48 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ-QSYPLLGAKDSFSRAGN 142 + E + ++ A+ ++ + + Sbjct: 49 VDGEGEAPKFLREYGTREYATSTARKGYSGTAMFIRDGDWAKMKRVEATRLSAGGFDDEG 108 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R ++ +V++ ++ + + + +++ + + Sbjct: 109 R-----VLTAELDSCFVVNAYVPNSGAD------LKRLPERVEVWERAIREHVRALESRG 157 Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + GD N + L+ + Sbjct: 158 KAVIYCGDLNVAHEEIDLWGRHAENSKSAGFTPEERAAMTRLLEECDLVDTFRAHRPDAR 217 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 A + +DY + + ++ D SDHCP Sbjct: 218 AFTYWSYRAGAREKNRGWRLDYILASRRLADSIV-----------DAYALPDVLGSDHCP 266 Query: 298 I 298 + Sbjct: 267 V 267 >gi|257867352|ref|ZP_05647005.1| exodeoxyribonuclease [Enterococcus casseliflavus EC30] gi|257873685|ref|ZP_05653338.1| exodeoxyribonuclease [Enterococcus casseliflavus EC10] gi|257801408|gb|EEV30338.1| exodeoxyribonuclease [Enterococcus casseliflavus EC30] gi|257807849|gb|EEV36671.1| exodeoxyribonuclease [Enterococcus casseliflavus EC10] Length = 252 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 81/305 (26%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + + + LDAD LQE Sbjct: 1 MKFISWNVNGLRAIVKKNF---------------SEVFEALDADFFCLQETKLQEG-QIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + + + D+ R Sbjct: 45 LDLPGYHQYWNYAEKKGY----------SGTAIFAKEPALSVRYGLGIEEHDTEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ + + ++ + + Sbjct: 91 -----VITLEYPEFFLITCYTPN-------SQNELRRLDYRMTWEDAFLAYL-TELKQQK 137 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + T+ F Sbjct: 138 PVILCGDLNVAHKNIDIKNWKTNQKSAGFTPEEREKFSTLLAAGFTDTFRYFYPDAEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + + L+ + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSDDLNESLLDAKIHTDII-----------GSDHCPVE 246 Query: 300 IDYDF 304 +D ++ Sbjct: 247 LDLNY 251 >gi|228930104|ref|ZP_04093114.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228829603|gb|EEM75230.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 337 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 45/322 (13%), Positives = 105/322 (32%), Gaps = 60/322 (18%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T + + + +N ++D Sbjct: 35 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 94 Query: 71 LQEMG----------SYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKK 119 LQE+ + + K P + + ++ K Sbjct: 95 LQEVDIKSMRSFDVNGHEFLKKGLPNYVSSFGKNYDTKWVPVPITSPMGYAEAGLSTFSK 154 Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176 + + L G + R + R VE + +N GK + ++++HL + Sbjct: 155 YTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---------- 204 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 Y + QQ ++LK ++ + E ++ GD+N+ ++ + +D + P + Sbjct: 205 YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWLVEL 264 Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280 D + ID F++ N ++ ++ + Sbjct: 265 PKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 322 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 SDH P+S + Sbjct: 323 EN----------SDHNPVSAVF 334 >gi|239813032|ref|YP_002941942.1| endonuclease/exonuclease/phosphatase [Variovorax paradoxus S110] gi|239799609|gb|ACS16676.1| Endonuclease/exonuclease/phosphatase [Variovorax paradoxus S110] Length = 242 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 76/256 (29%), Gaps = 38/256 (14%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAV--AKVFPKNTWCIFY----STERLINHSKRDSN 107 LR + + AD+VFLQE+ ++ KV + + + + Sbjct: 18 LPELRDAVRTVGADVVFLQEVLGTHSRHSRKVNNWPEAPHYEFLADTMWPQFAYGRNAVY 77 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 H AV K V +++ + A R + ++ + G+ + V I Sbjct: 78 PRGHHGNAVLSKFPIVHFRNHDVSVAG-----PEKRGLLHCVLRLPGRTVDVHAICAHLG 132 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 + + QQ + L + + + P ++AGDFN Sbjct: 133 L-----------AEAHRQQQLELLLHIVRDEVPADAPLIVAGDFND-----WRGRAHQVL 176 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + F S +P+D + + + Sbjct: 177 EEGAALREVFVHANGSAAKTFPARFPLLPLDRIYVRNAG-----------VHAPVVLPRK 225 Query: 288 RGKRLSDHCPISIDYD 303 LSDH P+ + D Sbjct: 226 PWSHLSDHAPLVANID 241 >gi|289666147|ref|ZP_06487728.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289670759|ref|ZP_06491834.1| exodeoxyribonuclease III [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 259 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 86/305 (28%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ SWN+N+L+ L+Q+ D+V +QE + + Sbjct: 1 MKIASWNVNSLN----------------VRLPHLQQWLTAFAPDVVGIQETKLEDHKFPD 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + +A+ ++ + Q+ F Sbjct: 45 AALAELGYRSVFC------------GQKTYNGVAILSRSPALDVQT-----GIPGFDDVQ 87 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + ++++++ + + + + Y + DWI Q+ ++ Sbjct: 88 QRVIAATV-----DGVRIINLYVVNGQDVGTDKYAYK------LRWLAAAHDWIAQQLQT 136 Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPND-----------SLIRFPKEKDSRCN 246 V+ GDFN + +D + D L + Sbjct: 137 YPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAALEKLLALGLHDAFRLHPQAAE 196 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID ++ ++ D +R SDH P Sbjct: 197 QFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGI-------DREPRTWERPSDHAP 249 Query: 298 ISIDY 302 + Sbjct: 250 AWVRL 254 >gi|319640027|ref|ZP_07994754.1| hypothetical protein HMPREF9011_00351 [Bacteroides sp. 3_1_40A] gi|317388305|gb|EFV69157.1| hypothetical protein HMPREF9011_00351 [Bacteroides sp. 3_1_40A] Length = 276 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 83/309 (26%), Gaps = 71/309 (22%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K +L L L+ +A +RL+++NI + + V D+ + Sbjct: 30 MKKTLLLLFTLLLALSAQSQNSLRLMTYNIKNANGMDDVC-----------DFQRIADVI 78 Query: 62 KNLDADIVFLQEMGSYN-------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 ++ ++V LQE+ S + ++ + +++ + I Sbjct: 79 NHIHPEVVALQELDSMTHRSGQKYVLGEIAGRTQMHAYFAP--------AIDYDGGKYGI 130 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + K + V ++ L G R R + + + Sbjct: 131 GLLTKEIPVSLKTMTLPG------REEARALIMAEFDN-------YIYCCTHLSLTEEDR 177 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 L+ PF +AGD N + Sbjct: 178 -------------MASLELIKDFAAAHKKPFFLAGDLNAEPESAFIKYL----------Q 214 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 F D + IDY + K S + SD Sbjct: 215 QDFQILSDVNQHTFPAPAPTETIDYITALKQNMKGFTVTSAQVVNEPV---------ASD 265 Query: 295 HCPISIDYD 303 H P+ + + Sbjct: 266 HRPLVVVLE 274 >gi|310824891|ref|YP_003957249.1| endonuclease/exonuclease/phosphatase family protein [Stigmatella aurantiaca DW4/3-1] gi|309397963|gb|ADO75422.1| Endonuclease/exonuclease/phosphatase family protein [Stigmatella aurantiaca DW4/3-1] Length = 323 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 47/325 (14%), Positives = 91/325 (28%), Gaps = 60/325 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD--ADIVFLQEMGSYN-- 78 +R+VS+N+ KR + LD D+V LQE+ + + Sbjct: 5 PLRIVSYNVRYFGHALRGLASTQGPKR------RVSAALAALDPLPDVVCLQEVETSSFR 58 Query: 79 ---AVAKVFPKNTWC------------------IFYSTERLINHSKRDSNNDIHTAIAVR 117 A + P T + + +H K + T +A+ Sbjct: 59 SSVAERRKVPGETQLQAFMGRMEEIFAAQGREMPYDAFYFRAHHYKLGDFSLYTTGLAIL 118 Query: 118 KKNVRVLQQSYPLLGAKDSFS--------RAGNRRAVELLV--EINGKKIWVLDIHLKSF 167 + + + R +R + + +G+ V + HL Sbjct: 119 VNRRTLRVDRHNVDEPSQITHHHVQRLKERKQSRICAHMRLLRTSDGRPFHVFNTHLSLP 178 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFW 225 Q + + + PFV+ GDFN + Sbjct: 179 TPFAREFWATKDKMGCGVNQLHEARKLVALLTEHAQGEPFVVTGDFNSPPASP-----VF 233 Query: 226 KTIDPNDSLIRFP----KEKDSRCNANKNLRN---KIPIDYFVMDQNAYKFLIQESFSEI 278 + + L + S ++ +D+ + + ++L E Sbjct: 234 RYLCEEAQLTCAQAIVGQINPSAIRGFPTAGFMHLRMHLDH-LFSGSGVRWLD----MEE 288 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303 D+ SR LSDH P+ + Sbjct: 289 TRPFGDVGSRFHGLSDHMPLIARFT 313 >gi|300715934|ref|YP_003740737.1| conserved uncharacterized protein YbhP [Erwinia billingiae Eb661] gi|299061770|emb|CAX58886.1| conserved uncharacterized protein YbhP [Erwinia billingiae Eb661] Length = 253 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 38/290 (13%), Positives = 82/290 (28%), Gaps = 49/290 (16%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + +++++ N + LR + ADIVFLQE+ Sbjct: 5 AQGFSLKVLTINTHKGFAAFNRRF----------ILPELRDAVRATAADIVFLQEVMGAP 54 Query: 79 AVAKV----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 A+ ++ +P F + +++ + H A+ + + Sbjct: 55 AINQLKVENWPDTPHYEFLADTMWNDYAYGRNAVYPEGHHGNAILSRYPIL-----KFEN 109 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 S R + V I + + I + + Q + L Sbjct: 110 RDISVEGTEKRGLLHCQVAIPSHEQPLHAICVHLGLKD-----------AHRHAQLKLLC 158 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + + + P V+AGDFN ++ F ++ Sbjct: 159 ELVNS-LPADAPVVVAGDFNDWQQKANAVLKKGAALEE-----VFSRKFGRPARTFPARF 212 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + I + + LSDH P++++ Sbjct: 213 PLLRLDRIYVRNAG-----------ISHPQTIPLRPWSHLSDHAPLAVEI 251 >gi|163734662|ref|ZP_02142101.1| hypothetical protein RLO149_14583 [Roseobacter litoralis Och 149] gi|161392155|gb|EDQ16485.1| hypothetical protein RLO149_14583 [Roseobacter litoralis Och 149] Length = 227 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 76/282 (26%), Gaps = 61/282 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK- 82 +++ S+NI K D + +DAD+V LQE Sbjct: 1 MKIASYNIR-----------KAVGLDWRRDPERVADVLLEIDADVVVLQEADRRTGTRAG 49 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 V P + S+ I +R + L Sbjct: 50 VLPIERLESELGYLLPDFSIRALSHGWHGNTILLRSHYDSHAARRIDLPSID-------P 102 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R AV + + +I + + L +Q L+ + Sbjct: 103 RGAVSVQIADPCVEIIGVHLGLTPG---------------TRRKQVDVLRQVLQ---GQT 144 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 P ++AGDFN + K +D + R + +D FV+ Sbjct: 145 HPVILAGDFN---------EWNLKRLDFGSDAQIVSPGL-----SFHAARPRAALDLFVL 190 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ + R SDH PI I DF Sbjct: 191 GPGL--RVVSSHVH--------KSTLAVRASDHLPIVITVDF 222 >gi|160900734|ref|YP_001566316.1| endonuclease/exonuclease/phosphatase [Delftia acidovorans SPH-1] gi|160366318|gb|ABX37931.1| Endonuclease/exonuclease/phosphatase [Delftia acidovorans SPH-1] Length = 289 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 42/299 (14%), Positives = 80/299 (26%), Gaps = 36/299 (12%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 +++WN +G + + D D++ LQE+ + + P Sbjct: 4 ILTWNTQWCLGLDGRMDPERI----------VAHALSMADIDVLCLQEIAVHYPGLQGAP 53 Query: 86 KNTWCIFYSTERLINHSKRDSN-------NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + + V + + + L D Sbjct: 54 GDQVEQVRAALPEGWKVFFGAAVDEFTAVGRQRFGNLVATRLPVLQLAHHRLPYPHDGGV 113 Query: 139 RAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW--- 194 R+ R V + + V+ HL+ F S + + +L S Q + L Sbjct: 114 RSMPRCCTAATVMDAALGPVRVMSTHLEYF----SRRQRMAQALALRSLQIEALGQAEAP 169 Query: 195 --------ITQKKESLVPFVIAGDFNRKINYLGNNDDF--WKTIDPNDSLIRFPKEKDSR 244 Q K V+ GDFN + + W + S Sbjct: 170 PQPASDGSPQQTKPHTPHAVLCGDFNFEPHEDEYAGLSRPWAAGEEGALTAGQWHNSWSV 229 Query: 245 CNANKNLRNKIPI-DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ++ + D + S S + RLSDH P+ + Sbjct: 230 LHPDQPQPPTFRLFDRQWGPEPGACDFAWVSDSLRGHVRGWAVDSDTRLSDHQPVLLQL 288 >gi|312961228|ref|ZP_07775733.1| exodeoxyribonuclease III [Pseudomonas fluorescens WH6] gi|311284886|gb|EFQ63462.1| exodeoxyribonuclease III [Pseudomonas fluorescens WH6] Length = 264 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 81/304 (26%), Gaps = 70/304 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + +++ ++N+N L + + Q+ DIV LQE+ ++ Sbjct: 2 KALKIATFNLNGL----------------RARLPNVLQWLAREQPDIVCLQELKLPQSL- 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 Y+ + +A+ ++ + L+ G S Sbjct: 45 ---------FPYADFEAAGYGAICLGQASWNGVAILARDAQPLESR---RGLPGDDSDNQ 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R + + V ++L + + Y + + L D+ + S Sbjct: 93 SRYIEAAV-----HGVLVGCLYLPNGNPQPGPKFDYKLA------WFERLIDYAGALQAS 141 Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246 P ++AGDFN L ++ + Sbjct: 142 EHPVLLAGDFNVVPTDLDIYNPRSWLKDALLQPESRACYQRLLAQGWTDALRHLYPDERV 201 Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ +++ +L D SDH P Sbjct: 202 YTFWDYFRQHWQKNSGLRIDHLLLNPALTPYLKDAGV-------DAWVRNEPHASDHAPT 254 Query: 299 SIDY 302 I Sbjct: 255 WIQL 258 >gi|298387677|ref|ZP_06997228.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp. 1_1_14] gi|298259533|gb|EFI02406.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp. 1_1_14] Length = 372 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 38/299 (12%), Positives = 86/299 (28%), Gaps = 68/299 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + ++N+N+ + + + Y K L DI QE + Sbjct: 116 LTIATYNVNSFNHEHTGFSC-----------KQIAAYMKELGVDIFCFQEF----GINHE 160 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F ++ S + + ++V + +Q + + Sbjct: 161 FGIDSLRTVLSEWPYY-YVPSSPAGESLLQLSVFSRYPIKEKQLVTYPNSNNCS------ 213 Query: 144 RAVELLVEINGKKIWVLDIHLKSF-------------CFLDSLENTY---------SPSC 181 + ++IN + I + + HL++ D+ + Sbjct: 214 --LWCDIDINDQTIRLFNNHLQTTEVSRNKRKLEKELRADDTDRAERAALTLADGLHENF 271 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + QA+ + I+ S P ++ GDFN + + ++ F Sbjct: 272 KKRAAQAEHINQLISA---SPYPTLVCGDFNSLPSSYVYQTVKGEKLNDG-----FQTCG 323 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ++ + IDY + + D S SDH P+ + Sbjct: 324 HGYMYTFRYFKHLLRIDYILHSSE--------------FQGVDYFSPDLEYSDHNPVVM 368 >gi|260642288|ref|ZP_05415267.2| exodeoxyribonuclease III [Bacteroides finegoldii DSM 17565] gi|260622802|gb|EEX45673.1| exodeoxyribonuclease III [Bacteroides finegoldii DSM 17565] Length = 255 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 30/303 (9%), Positives = 82/303 (27%), Gaps = 73/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+N L ++ + DI+ LQE Sbjct: 2 MKIITYNVNGLRAAVSKGFP---------------EWLAQENPDILCLQETK-------- 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + ++ +A+ K + G R Sbjct: 39 LQPDQYPAEVFEALGYKSYLYSAQKKGYSGVAILTKQEP----DHVEYGMGIEAYDNEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + V+ ++ S D + + + + ++T+ +++ Sbjct: 95 F-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEDFQKYVTELRKTRP 142 Query: 204 PFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD+N + + + + + Sbjct: 143 NLILCGDYNICHEPIDIHDPVRNAKNSGFLPEEREWMTRFLSAGFIDSFRLLYPEKQEYT 202 Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + R IDY + + ++L + SDHCP+ + Sbjct: 203 WWSYRFNSRAKNKGWRIDYCMTSEPVRRWLKSARILNEAVH-----------SDHCPMVL 251 Query: 301 DYD 303 + D Sbjct: 252 EID 254 >gi|161830200|ref|YP_001596787.1| endonuclease/exonuclease/phosphatase family protein [Coxiella burnetii RSA 331] gi|161762067|gb|ABX77709.1| endonuclease/exonuclease/phosphatase family protein [Coxiella burnetii RSA 331] Length = 255 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 47/294 (15%), Positives = 89/294 (30%), Gaps = 51/294 (17%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 ++S+NI+ +R+ + +DADIV LQE+ Sbjct: 3 SLTPKRDAFTVLSYNIHKGFSARYRRFV----------LPDIREALRAIDADIVLLQEVQ 52 Query: 76 SYNAVAKVFPKNTWC------IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 + +++ I S + + H A+ + ++ Sbjct: 53 GKHHKSRLKKFAHADLPQTEFIAESKWPHYMYGRNAVYGSAHHGNALLSNFPFKMVENIN 112 Query: 130 LLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + S S+ +R + +++ ++ V+ IHL F + Q Sbjct: 113 V-----SLSQRASRSILHAIIDYEPTVELHVICIHLGLF-------------RAERDYQL 154 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 L I S P +IAGDFN G + K ++ + + Sbjct: 155 ITLSKRIEAHVPSHAPLIIAGDFNDW--RRGAFNYMEKELELKEVYKVLEGKH---AKTY 209 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + +D L+ Y K+LSDH P+ + Sbjct: 210 PASRPTLEVDRIYYRG---LKLLSGEIFNENY--------WKKLSDHLPLHAKF 252 >gi|37993825|gb|AAR06992.1| sphingomyelinase [Bacillus cereus] Length = 252 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 81/230 (35%), Gaps = 26/230 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230 Q + ++D+I + + + GD N K N +KT+ Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVKKINAENNSDSEYASMFKTLHA 247 >gi|167906917|ref|ZP_02494122.1| Metal-dependent hydrolase [Burkholderia pseudomallei NCTC 13177] Length = 296 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 39/286 (13%), Positives = 74/286 (25%), Gaps = 56/286 (19%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +++R+ ++NI+ T + L AD++ LQE+ Sbjct: 4 AQPRTRELRIATYNIHG-----------GLGAWTAGAAERIAVVLDELRADVIALQEVPL 52 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 A + T AV + + L S Sbjct: 53 GGARGADV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----S 104 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 F R A++ +E + V+ HL S + S Q L + Sbjct: 105 FGNREPRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LA 148 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 +P ++ GD N + F + + F + R Sbjct: 149 AFDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS-- 197 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + ++L+ + DH P+ Sbjct: 198 LDRIWVHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 233 >gi|218906273|ref|YP_002454107.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH820] gi|218538717|gb|ACK91115.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH820] Length = 352 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 45/322 (13%), Positives = 106/322 (32%), Gaps = 60/322 (18%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T + + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMG----------SYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKK 119 LQE+ + + K P + + ++ K Sbjct: 110 LQEVDIKSMRSFDVNGHEFLKKGLPNYVSSFGKNYDTKWVPVPITSPMGYAEAGLSTFSK 169 Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176 + + L G + R + R VE + +N GK + ++++HL + Sbjct: 170 YTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---------- 219 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 Y + QQ ++LK ++ + E ++ GD+N+ ++ + +D + P+ + Sbjct: 220 YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPDWLVEL 279 Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280 D + ID F++ N ++ ++ + Sbjct: 280 PKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 337 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 SDH P+S + Sbjct: 338 EN----------SDHNPVSAVF 349 >gi|325970995|ref|YP_004247186.1| exodeoxyribonuclease III Xth [Spirochaeta sp. Buddy] gi|324026233|gb|ADY12992.1| exodeoxyribonuclease III Xth [Spirochaeta sp. Buddy] Length = 250 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 83/304 (27%), Gaps = 79/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N L + +Y K +ADI LQE + Sbjct: 1 MKLVSWNVNGLRAIQKKGFD---------------EYLKQSNADIFCLQETKLQEDQISL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++S + ++ A+ K V Q + Sbjct: 46 VTE-GYHTYWS----------FAEKKGYSGTALFSKQEPVSVQRGIGHPLDNEGR----- 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V ++ +V+ + + + +T L Sbjct: 90 -----TVTAEFEQFYVVCCYTPNSQEALARLDTRMDWDEAFRSYVCSLASM--------K 136 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P +I GD N + + + ++ + F +R Sbjct: 137 PVIICGDLNVAHQSIDLRHPKANERNAGYSIEERNQFTSLLDAGFIDTFRYLYPNREGIY 196 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDY+++ + + ++ + + SDH P+ Sbjct: 197 SWWSYRFKARENNAGWRIDYWLVSEELRQSILDSTI-----------DTETQGSDHAPVI 245 Query: 300 IDYD 303 + + Sbjct: 246 LYLN 249 >gi|167763762|ref|ZP_02435889.1| hypothetical protein BACSTE_02142 [Bacteroides stercoris ATCC 43183] gi|167697878|gb|EDS14457.1| hypothetical protein BACSTE_02142 [Bacteroides stercoris ATCC 43183] Length = 374 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 92/312 (29%), Gaps = 64/312 (20%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 T ++L+S+NI +G + Y K +ADI+ L Sbjct: 98 LNFHTTELPEGSIKLLSYNIMGF---DGAYKKDGKNP--------ILTYLKESNADILCL 146 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 QE S + + K+ + S N IA K + + Sbjct: 147 QEYASDESPRHLTQKDI-ERELKDYPYRRINVVGSGNGYTNRIACYSKFPILSARVLDYA 205 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS------------- 178 + + +V +++N I +++ HL+S + ++ Y Sbjct: 206 SSYN--------GSVLYELKLNEDTITLINNHLESNKLTKADKDIYEEILKAPETEKVKS 257 Query: 179 ----------PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 + ++ + QA + I ++ GDFN + + + Sbjct: 258 GARLLLHKLAEASAIRAPQADTIAREIA--SSRHPSVIVCGDFNDTPISYA-HRVIAQNL 314 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D F + + + ID ++ +N + + R Sbjct: 315 DD-----AFTQSGRGLGISYNQNKFYFRIDNILISKNLRSY-------------NCTVDR 356 Query: 289 GKRLSDHCPISI 300 R SDH PI Sbjct: 357 SIRESDHYPIWC 368 >gi|153009147|ref|YP_001370362.1| endonuclease/exonuclease/phosphatase [Ochrobactrum anthropi ATCC 49188] gi|151561035|gb|ABS14533.1| Endonuclease/exonuclease/phosphatase [Ochrobactrum anthropi ATCC 49188] Length = 369 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 47/366 (12%), Positives = 95/366 (25%), Gaps = 86/366 (23%) Query: 24 VRLVSWNINTLSEQEGVSL----------------WKNSVKRTTSDYTLLRQY------- 60 + ++N+ L + S + R + Sbjct: 2 FTIATFNVENLMRRFDFSGFRNELHQDRTLQLFEINDEAQYRLLEQARAVAHADDTRQMT 61 Query: 61 ---AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 ADI+ LQE+ + A+ + + R + + I A+ +R Sbjct: 62 ALAIAETRADILCLQEVDNLAALNAFEYGYLFKMIGHGFRHKYLIDGNDSRGIDVAVMMR 121 Query: 118 ------KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKI 157 + SY + D R R + L + I GK I Sbjct: 122 DTTRDGQPIEVDEVTSYAYVTYNDFGLYEPVLGELGLEPHDRIFKRDCLNLDIRIAGKPI 181 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES----LVPFVIAGDFNR 213 + HLKS + + + S + +A+ ++ I K ++I GDFN Sbjct: 182 SLFVTHLKSMTGARNGFDGRTASLPVRRAEARAMRRIIEDKFGPSNVADRRWLICGDFND 241 Query: 214 ----------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP 256 + + ++ + + Sbjct: 242 YRERIIIGGDEWNGYQFTPMVEEESALDVLLADGFAVNLVERRPVMDRWTLYHTRGPQER 301 Query: 257 ----IDYFVMDQNAYKFLIQESFSEILY---------------NEDDIKSRGKRLSDHCP 297 +DY + + K + + I + SDHCP Sbjct: 302 HLCQLDYIMASPSFAKKNEKAVPNIIRRGQPWRTIFPPDQQIERYPRTGWDRPKASDHCP 361 Query: 298 ISIDYD 303 +++ + Sbjct: 362 VAVTLN 367 >gi|269218059|ref|ZP_06161913.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 848 str. F0332] gi|269212994|gb|EEZ79334.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 848 str. F0332] Length = 263 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 33/300 (11%), Positives = 74/300 (24%), Gaps = 59/300 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WNIN + + + D D++ LQE Sbjct: 1 MRIATWNIN----------------SIRARHERALAVLERWDLDVLLLQETKCRPD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + D +A+ + A + Sbjct: 41 ------QFPAAEFEAAGYEVAAHGLDQWNGVAILSRVGIEEVTVGFEGQPAFGKEGAEPK 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + LD Y ++A ++S Sbjct: 95 VEARA-IGARCGGVGVWSLYVPNGRALDDPHYPYKLEFLAALRRAAG----AQLAEDSSA 149 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++AGD+N + + + ++ Sbjct: 150 QLLLAGDWNVVPSDADVWDPELFRGELYASDPEREAFHAFADAGFAEVTRGATEAPYTFW 209 Query: 249 KNLRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + + ID+ + D + +GK SDH P+ ++ Sbjct: 210 DYQRLRFPKNEGMRIDFAWASPALAGRVAAAHI-------DRNERKGKGASDHVPVVVEL 262 >gi|241888975|ref|ZP_04776279.1| exodeoxyribonuclease III [Gemella haemolysans ATCC 10379] gi|241864224|gb|EER68602.1| exodeoxyribonuclease III [Gemella haemolysans ATCC 10379] Length = 254 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +S+N+N L G + ++ K LDAD LQE A Sbjct: 1 MKCISFNVNGLRAIVGKNFEED---------------FKQLDADFFCLQETK-MQAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ + ++ A+ K+ + + D+ R Sbjct: 45 LQFDGYYSYFN----------YAERKGYSGTAIYTKHEPLNVTYGIGIEEHDTEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + K + + ++ + L Sbjct: 91 -----VITLEYDKFFFITVYTPNSGSELKRLEYRMSWEEDFKNYLLALNK--------TK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GD N + + + + F A Sbjct: 138 GVVVCGDLNVAHTEIDLKNPKSNMKNAGFTPEEREKFTKLLDAGFIDTFRYYNPDLTGAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ ++ ++L + ++ SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFLVSRDLEEYLESAAIHNEIF-----------GSDHCPVE 246 Query: 300 IDY 302 + Sbjct: 247 LVL 249 >gi|311742697|ref|ZP_07716506.1| exodeoxyribonuclease III [Aeromicrobium marinum DSM 15272] gi|311314325|gb|EFQ84233.1| exodeoxyribonuclease III [Aeromicrobium marinum DSM 15272] Length = 274 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 92/305 (30%), Gaps = 63/305 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV-AK 82 +R+ + N+N + + ++ + L ++ DAD+V LQE+ + +A+ + Sbjct: 5 LRIATVNVNG---------VRAAWNKSRGQTSGLAEWLAGRDADVVTLQEVRAPDALVRE 55 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + ++ + +AV + V + +G D+F Sbjct: 56 LLAGTGYHVAHTE----------AAAKGRAGVAVLSRVEPVAVR----VGNGDAFFDDSG 101 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + +G + V+ ++ S ++ + + S Sbjct: 102 RWIEADVPLADGSVLTVVSAYVHSGEAGTPRQDEKYRFLERTGARMAEI-------SASG 154 Query: 203 VPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD N + F + D + + Sbjct: 155 THGLLTGDLNVAHTPRDIRNAKGNLKKAGFLPEERAHFDRWFDELGWVDVPRRLAGDVDG 214 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ + + + D +S +R SDH P Sbjct: 215 PYTWWSMRGQAFDNDTGWRIDHQIATPDLATAATTAAV-------DRAESWAERWSDHAP 267 Query: 298 ISIDY 302 + +DY Sbjct: 268 LVVDY 272 >gi|229187318|ref|ZP_04314462.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1] gi|228596169|gb|EEK53845.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1] Length = 337 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 46/327 (14%), Positives = 107/327 (32%), Gaps = 70/327 (21%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T + + + +N ++D Sbjct: 35 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 94 Query: 71 LQEMG----------SYNAVAKVFPKN------TWCIFYSTERLINHSKRDSNNDIHTAI 114 LQE+ + + K P + + + N + Sbjct: 95 LQEVDIKSLRSFDVNGHEFLKKGLPNYVSSFGKNYDTKWVPVPITNPMGYA-----EAGL 149 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLD 171 + K + + L G + R + R VE + +N GK + ++++HL + Sbjct: 150 STFSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA----- 204 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 Y + QQ ++LK ++ + E ++ GD+N+ ++ + +D + P Sbjct: 205 -----YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPE 259 Query: 232 DSLIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESF 275 + D + ID F++ N ++ Sbjct: 260 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQG 317 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + SDH P+S + Sbjct: 318 KDLKFEN----------SDHNPVSAVF 334 >gi|170079433|ref|YP_001736071.1| sphingomyelinase-c (sphingomyelin phosphodiesterase) [Synechococcus sp. PCC 7002] gi|169887102|gb|ACB00816.1| sphingomyelinase-c (Sphingomyelin phosphodiesterase) [Synechococcus sp. PCC 7002] Length = 301 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 95/306 (31%), Gaps = 40/306 (13%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNA 79 ++ ++++N+ LS R + +N + D++ + E A Sbjct: 14 SKSFSILNYNVMLLSRNIPGQGNLMQNYRAQE----IATAIRNSNPWDVIVINEAFDNEA 69 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + ++S +++ +N + + + ++ + F Sbjct: 70 RNNLSRSLKEAGYFSATEVVDM----NNGKLEDGGVYLQSHWPIMATDQIIFSDCSGFDC 125 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK- 198 N+ AV + G + HL++ + + + + Q + L+ +I QK Sbjct: 126 QSNKGAVYAKINKEGIIYHIFGTHLQA----------DTENSGVRANQLRQLETFINQKT 175 Query: 199 ---KESLVPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRFPKEKDSRCNANKNL 251 + +IAGD N ++ + + F + Sbjct: 176 GGAQARREAIIIAGDLNFNYQTAEYDNALETLNAQFLGNIPQGYTFDPRMNDLAKYRYPN 235 Query: 252 RNKIPIDYFVMDQNAYK---------FLIQESFSEILYNEDDIKSRG----KRLSDHCPI 298 +DY ++ + + S E+ D + G + LSDH + Sbjct: 236 DPSEWLDYVLVSNESIQPNRTTLDLTKFRTASQYELPGKGDFLNLFGGTMVRDLSDHYGL 295 Query: 299 SIDYDF 304 S Y F Sbjct: 296 SATYLF 301 >gi|146298980|ref|YP_001193571.1| hypothetical protein Fjoh_1220 [Flavobacterium johnsoniae UW101] gi|146153398|gb|ABQ04252.1| hypothetical protein Fjoh_1220 [Flavobacterium johnsoniae UW101] Length = 363 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 32/360 (8%), Positives = 93/360 (25%), Gaps = 64/360 (17%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVS---WNINTLSEQEGVSLWKN-----------S 46 M R + L+ F + + + ++K + + +N L + + + + Sbjct: 1 MRRIFSFYLILFCLFNSNAQSKKYSIHTAAFYNFENLFDIYDDASTNDDEWTPTGAQHWT 60 Query: 47 VKRTTSDYTLLRQYAKNLD-------ADIVFLQEMGSYNAVAKV------FPKNTWCIFY 93 ++ L + + ++ E+ + + + + I + Sbjct: 61 KEKYEQKLKNLSRVISEIGKPENSNAPTLIGCSEVENRGVLEDLIKEEKIADYDYGIIHF 120 Query: 94 STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK------------DSFSRAG 141 + + ++ ++ P+ D+ +R Sbjct: 121 DSPDQRGIDVALLYQKKYFRPTSYSNIPLLIYKNKPVTQETNNEDLGDVEIKIDTKNRVF 180 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + + ++I ++ H S + + + + L+++ I + Sbjct: 181 TRDQLLITGFLENEEIHIIVNHWPSRSGGEKASSPFREAAGRLNRKIIDSLQQINPMAK- 239 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPND-----SLIRFPKEKDSRCNANKNLRNKIP 256 + GD N + D F + + + Sbjct: 240 ---VITMGDLNDGPFNKSVKIELGAKAKKADVPEFGVYNPFEEMAERGLGTIAFRDSWDI 296 Query: 257 IDYFVMDQNAYK------FLIQESFSEILYNEDDIKSRGKRL----------SDHCPISI 300 D +M ++ + + Y SDH P+ I Sbjct: 297 FDQIIMTKSFIEPDFSNFKFWKAGIFNRSYLIQASGKYKGYPLRNTLTEAGFSDHFPVYI 356 >gi|225159347|ref|ZP_03725644.1| DNA-(apurinic or apyrimidinic site) lyase [Opitutaceae bacterium TAV2] gi|224802053|gb|EEG20328.1| DNA-(apurinic or apyrimidinic site) lyase [Opitutaceae bacterium TAV2] Length = 259 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 79/304 (25%), Gaps = 71/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 ++LVSWN+N + L Y AD + LQE V Sbjct: 1 MKLVSWNVNGVRAVLQKG---------------LLDYIAASGADAICLQETKCQPGDVQH 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 V + ++ + +S + + + + +D G Sbjct: 46 VEWPAGYTAHWNAAQKRGYSGTAIFTRMGAG-----SSPALTPLAVTAGIGRDEHDTEGR 100 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 ++ ++++ ++ + + + + L+ + Sbjct: 101 ------VLTAEFPDFYLVNAYVPNAQPELARLPYRQRWDADFLAYLRGLE--------TR 146 Query: 203 VPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P V+ GD N + ++ L F + + + Sbjct: 147 KPVVMCGDLNVAHEEIDLARPKENVGNPGFSNEERAGFREFLRAGFLDTFREFEKGPGH- 205 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF+ + L + SDHCPI Sbjct: 206 YSWWSYRAGARGKNVGWRIDYFLASASLRPRLKRAWIE-----------PAVMGSDHCPI 254 Query: 299 SIDY 302 ++ Sbjct: 255 GLEL 258 >gi|154484298|ref|ZP_02026746.1| hypothetical protein EUBVEN_02011 [Eubacterium ventriosum ATCC 27560] gi|149734775|gb|EDM50692.1| hypothetical protein EUBVEN_02011 [Eubacterium ventriosum ATCC 27560] Length = 251 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 78/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + + +DADI +QE ++ Sbjct: 1 MKLISWNVNGIRACVTKGFM---------------DFFNEIDADIFCIQESKMQEGQLEL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + ++ A+ K + + + D R Sbjct: 46 EMPGYYQYW-----------NYAEKKGYSGTAIFTKKEPMDVKYGIGIEEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ + + + + L++ Sbjct: 91 -----VITLEFEDFYMVTCYTPNSQNELKRLDYRMQWEDDFKAYLKKLEE--------SK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + + + F Sbjct: 138 PVVLCGDLNVAHKEIDLKNPKTNRKNAGFTDEEREKMTKLLDDGFIDTFRYFYPDLEGKY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ + L + SDHCPI Sbjct: 198 SWWSYRFKAREKNAGWRIDYFIVSEALKDKLEGADIHTEIL-----------GSDHCPIE 246 Query: 300 IDYD 303 +D + Sbjct: 247 LDLN 250 >gi|37993804|gb|AAR06978.1| sphingomyelinase [Bacillus cereus] Length = 252 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 83/230 (36%), Gaps = 26/230 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTSEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + I V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFIHVIGTHLQA---EDSMCGKTSPA-SVRTD 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230 Q + ++D+I + + +I GD N +KT++ Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNA 247 >gi|299146132|ref|ZP_07039200.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_23] gi|298516623|gb|EFI40504.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_23] Length = 253 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 30/302 (9%), Positives = 82/302 (27%), Gaps = 73/302 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+N L L ++ + DI+ LQE Sbjct: 1 MKIITYNVNGLRAAVSKGLP---------------EWLAQENPDILCLQETK-------- 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + ++ +A+ K + G R Sbjct: 38 LQPDQYPGEVFEALGYKSYLYSAQKKGYSGVAILTKQEP----DHVEYGMGMEAYDNEGR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + V+ ++ S D + + + + ++ + ++S Sbjct: 94 F-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEDFQKYVMELQKSRP 141 Query: 204 PFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD+N + + + + + Sbjct: 142 NLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLSAGYVDAFRTLCPEKQEYT 201 Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + R IDY ++ + L + + SDHCP+++ Sbjct: 202 WWSYRFNSRAKNKGWRIDYCMVSEPVRPLLKRAYILNEAVH-----------SDHCPMAL 250 Query: 301 DY 302 + Sbjct: 251 EI 252 >gi|192361651|ref|YP_001982212.1| exonuclease III [Cellvibrio japonicus Ueda107] gi|190687816|gb|ACE85494.1| exodeoxyribonuclease III [Cellvibrio japonicus Ueda107] Length = 269 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 32/311 (10%), Positives = 80/311 (25%), Gaps = 75/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +S+N+N + L N + D + LQE + Sbjct: 1 MKAISFNVN----------------SIRTRMHQLEAVVNNHNPDFIGLQETKVND----- 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H +A+ ++ ++ + S R Sbjct: 40 -----PDFPLEAIQSLGYHIEFFGQKTHYGVAILSRHPFK-----KVIKGFRTDSDDAQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + ++ +L+ F + ++ L ++T++ + Sbjct: 90 RFIGGVFDTPIGEVTLLN-----GYFPQGESRDHPIKFPGKAKFYADLLQYLTEEYQPQQ 144 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++L ++ + + + Sbjct: 145 QLIVMGDMNISHQDIDIGIGEENRKRWLRTGKCSFLPEEREWLDKLLAWGLQDTYRELNP 204 Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + ID + I D ++ Sbjct: 205 DSNEKFSWFDYRSGGFEDNPKRGLRIDLILATNPLINKCIDTGI-------DYDIRGMEK 257 Query: 292 LSDHCPISIDY 302 SDHCPI + Sbjct: 258 PSDHCPIWASF 268 >gi|94313832|ref|YP_587041.1| exodeoxyribonuclease III [Cupriavidus metallidurans CH34] gi|93357684|gb|ABF11772.1| Exodeoxyribonuclease III [Cupriavidus metallidurans CH34] Length = 283 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 85/304 (27%), Gaps = 72/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + L + + D+ LQE+ AV + Sbjct: 4 LKIATFNING----------------IHARLPSLLAWLEREQPDVACLQEL---KAVDES 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + +A+ K ++ L G + +R Sbjct: 45 FPVAELHA-------AGYGAVWQGQKSWNGVAILAKGSDPVEVRRGLPGDA---ADTQSR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V ++L + + Y + + L + S Sbjct: 95 YIEAAV-----AGVLVACLYLPNGNPQPGPKFEYKLA------WFERLIRHASTLYASGH 143 Query: 204 PFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNA 247 P V+AGDFN + + + ++ + + D+R Sbjct: 144 PVVLAGDFNVVPTDDDIYNPRSWLKDALLQPASRECYRQLLEQGWTDALRTRYPDTRIYT 203 Query: 248 NKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ ++ + + D SDH P Sbjct: 204 F-WDYFRQHWQKDSGLRIDHLLLSRSLAQHMRDAGV-------DKWVRGEPHASDHAPAW 255 Query: 300 IDYD 303 ++ + Sbjct: 256 VEIE 259 >gi|326797545|ref|YP_004315364.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] gi|326548309|gb|ADZ76694.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] Length = 348 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 43/282 (15%), Positives = 76/282 (26%), Gaps = 61/282 (21%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 R++S+NI + D + + K D+V LQE+ S + Sbjct: 126 RIMSYNI-----------FIGKGMDEVIDLSRSARIIKEYKPDLVALQEVDSIAERSGWV 174 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + + I + IAV K + PL G + R Sbjct: 175 DQPKELGRLTGMNYIFAP-ATPRSKGKYGIAVLTKEKPLAYHYMPLPGQE------EPRT 227 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + + + ++HL SL + +A L P Sbjct: 228 LLIVEF----QDYIFCNVHL-------SLNIDSRRQSIPIINEALKLY---------TKP 267 Query: 205 FVIAGDFNRKINYLGNND--DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 ++AGDFN + W+ + + +DY Sbjct: 268 IILAGDFNSLPVNDDIIKIQETWQYLSD------------PSLKTMPSNDPIWTLDYIWG 315 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + I SDH P+ +D +F Sbjct: 316 YKANGHAYKVSNTKVIEEKT---------ASDHLPVYVDVEF 348 >gi|16119275|ref|NP_395981.1| exodeoxyribonuclease III [Agrobacterium tumefaciens str. C58] gi|15161781|gb|AAK90422.1| exodeoxyribonuclease III [Agrobacterium tumefaciens str. C58] Length = 258 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 81/303 (26%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L ++N+N ++ +L ++ D+V LQE+ + N Sbjct: 1 MKLATYNVNGING----------------RLEVLLRWLAEAKPDVVCLQELKAPND---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +A+ ++ + L G D Sbjct: 41 ------KFPRREIERAGYGAIWRGQKSWNGVAILARDQEPRETRRGLPGDPDDSHSRYIE 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A+ I + ++L + + Y + + L + + E V Sbjct: 95 AAI--------DGIVIGCLYLPNGNPAPGPKFDYK------LRWFERLYSYAAELFELDV 140 Query: 204 PFVIAGDFNRKINYLG---NNDDFWKTIDPND-----------SLIRFPKEKDSRCNANK 249 P + GDFN L + + + Sbjct: 141 PVALVGDFNVMPTDLDVYKPERWRDDALFRPEVRAAYAELIAMGWTDAVRLLHPEERIYT 200 Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + ID+F++ + + L D + SDH P+ I Sbjct: 201 FWKYFRNAFARDAGLRIDHFLLSPSLRERLQTCGV-------DKFARAWEHTSDHAPVWI 253 Query: 301 DYD 303 + D Sbjct: 254 ELD 256 >gi|254382239|ref|ZP_04997600.1| exonuclease [Streptomyces sp. Mg1] gi|194341145|gb|EDX22111.1| exonuclease [Streptomyces sp. Mg1] Length = 261 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 80/303 (26%), Gaps = 68/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++N+N T+ L + ++ D+V +QE Sbjct: 1 MRIATFNVN----------------SITARLPRLLAWLESSGTDVVCIQETKCSAE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + R + + + +A+ K + L G D R Sbjct: 41 ------QFPHEQLRELGYEAAVNATGRWNGVALISKVGLEDVVTG-LPGGPDYEGVQEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +++ + ++ Y + + L + + Sbjct: 94 A-----ISATCGGVRLWSVYVPNGREVEHDHYGYK------LEWFRALTAAVAEDAAGPR 142 Query: 204 PFVIAGDFNRKINYLGNND-DFWKTIDPNDSLIRFPKEKDSRC-------------NANK 249 PF + GD+N D ++ + R E Sbjct: 143 PFAVLGDYNVAPTDEDVFDPAVFEGLTHVTPAERAALEALRAAGLSDVVPRPLKYDRPYT 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID ++ K D + +GK SDH P+ + Sbjct: 203 YWDYRQLAFPKNRGMRIDLVYGNEAFAKA-------VTDAYVDREERKGKGASDHAPVVV 255 Query: 301 DYD 303 D Sbjct: 256 DLS 258 >gi|324998398|ref|ZP_08119510.1| exodeoxyribonuclease III Xth [Pseudonocardia sp. P1] Length = 287 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 36/296 (12%), Positives = 72/296 (24%), Gaps = 49/296 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N S L + D D+V LQE K+ Sbjct: 1 MRLATWNVN----------------SAKSRLPRLLPWLDERDPDVVCLQE-------TKL 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + F ++ +AV + S Sbjct: 38 SDDDFAATFDDELAARGYAVAHHGQGRWNGVAVLSRVGLDDVVRGLPGEPVFSEGGLDVP 97 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-PSCSLLSQQ------AQWLKDWIT 196 A + G + V +++ + Y + L Q A + Sbjct: 98 DARAVTATCGG--LRVTSVYVPNGREPSDPHYAYKLRWLAALRDQVVAGDPATTVVAGDV 155 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-- 254 + F+ + + + +++ + Sbjct: 156 NIAPTDDDVWDRSQFDGATHVTPAEREALAGLVGAGLHDVL-RDRWPDERVFTYWDYRAG 214 Query: 255 -------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ID + ++ D +G+ SDH P+ +D D Sbjct: 215 RFHQDQGMRIDLVLAGEDPAGRRAAVWV-------DRKARKGRSPSDHAPVVLDLD 263 >gi|315641336|ref|ZP_07896412.1| exodeoxyribonuclease III [Enterococcus italicus DSM 15952] gi|315482909|gb|EFU73429.1| exodeoxyribonuclease III [Enterococcus italicus DSM 15952] Length = 252 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 69/301 (22%), Gaps = 78/301 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + LDAD LQE A Sbjct: 1 MKLISWNVNGLRAVMKKNFM---------------DVFTQLDADFFCLQETK-LQAGQIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S G R Sbjct: 45 MDLPGYTQYWNYAVKKGYSGTAIFAK--------------EPADNVFYGIGKEEHDQEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ + + + L + Sbjct: 91 -----VITLEYPQFYLVTCYTPNSQNELKRLDYRMEWEDDFVAYLDEL--------KKDR 137 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + + F A Sbjct: 138 PVIVCGDLNVAHQEIDLKNWKTNQKNAGFTNEERAKFTALLDHGYTDTFRHFYPELTGAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ + L S SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFIVSNDLTSHLTSASIH-----------ADILGSDHCPVE 246 Query: 300 I 300 + Sbjct: 247 L 247 >gi|300704421|ref|YP_003746024.1| hypothetical protein RCFBP_20225 [Ralstonia solanacearum CFBP2957] gi|299072085|emb|CBJ43417.1| conserved protein of unknown function, endonuclease/exonuclease/phosphatase family [Ralstonia solanacearum CFBP2957] Length = 289 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 85/305 (27%), Gaps = 50/305 (16%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAKVF 84 +++WNI +G D + A+ + DI+ LQE+ S Sbjct: 5 ILTWNIQWGRGADG-----------RVDLPRMLAEARAMGPFDILCLQEVTSGFGNLPGR 53 Query: 85 PKNTWCIFYSTERLINHS--------KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 P + + + + + A+ + + + L + Sbjct: 54 PGDDQWRELAGTLGPAFTLIDGIALERHEGARIQRFGNAIATRLPVLHVARHALPCPA-A 112 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A+E +V+ + V+ HL+ + + + + + Sbjct: 113 ACPTMPRMAIEAIVQAPFGPLRVISTHLEYYSETQRIAQIDALRALHVEGWMRAAHPPTL 172 Query: 197 QKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + + PF VI GDFN K + +L + Sbjct: 173 GPEPADGPFRPLAQTHATVICGDFNCKPDSTPKRLATVPFSHETATLYDAWEVAHGPAPQ 232 Query: 248 NKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 D+ ++ + + + + + + SDH P+ Sbjct: 233 PPTFGVHDRAGWTEPAYACDFMLISEPLKTRVARVEVNSVT-----------QASDHQPM 281 Query: 299 SIDYD 303 ++ + Sbjct: 282 LLELN 286 >gi|261332364|emb|CBH15359.1| RNA editing 3' exouridylylase MP99 [Trypanosoma brucei gambiense DAL972] Length = 929 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 88/325 (27%), Gaps = 56/325 (17%) Query: 12 FLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLW---KNSVKRTTSDYTLLRQYAKNLD 65 ++ +R+V+WN+ S G T++ Y L Q + LD Sbjct: 624 LAGSSANPASKEISTLRVVTWNVQ-FSRHSGERTPLGRDGIDWCTSTRYVALAQTLEGLD 682 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-----RDSNNDIHTAIAVRKKN 120 AD++ +QE+ WC + S + + S+ + + + Sbjct: 683 ADVIGMQEVE-----------PAWCKYLSQQPWVREKYAMTCCEHSHAIQPWGVMLLVRR 731 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + ++ S + ++ G + V +HL + + Sbjct: 732 SLCVTSTHHANVPAFSGHTSVMPEVTVVV--SEGVPVTVGSMHLLAPY--------NQNN 781 Query: 181 CSLLSQQAQWLKDWITQKKE---SLVPFVIAGDFNR-------KINYLGNNDDFWKTIDP 230 S + Q L + + ++ GDFN +G D + Sbjct: 782 ISNRTTQLDNLTKRLRTRPPINGKQAGLIVMGDFNDCAKNYFTFPPEMGFKDAWLLLHPD 841 Query: 231 NDSLIRFPKEKDSRCNANKNL----RNKIPIDYFVMDQNAYKFLIQESFSEIL------- 279 + D N D + + + E Sbjct: 842 EGVSSKSGHTIDGDRNPYAAQIIEKEFYGRADRVLFSSRNLQPIQTEIIGTTSVREMGIT 901 Query: 280 --YNEDDIKSRGKRLSDHCPISIDY 302 + D SDH + +++ Sbjct: 902 KQVDIDKDVPEYLYPSDHFGLLVEF 926 >gi|255534152|ref|YP_003094524.1| exodeoxyribonuclease III Xth [Pedobacter heparinus DSM 2366] gi|255347136|gb|ACU06462.1| exodeoxyribonuclease III Xth [Pedobacter heparinus DSM 2366] Length = 256 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 91/304 (29%), Gaps = 73/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+N+N + + + + + DAD++ +QE+ K Sbjct: 1 MKIISYNVNGIRSASTKNFFG---------------WLQATDADMICMQEV-------KA 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSN-NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 P I E+L H ++ +A+ + ++ G + + Sbjct: 39 LPSQIPEIIALIEQLGYHHYWFPAEKKGYSGVAILTRIKP----NHVEYGCGEEWIDKEG 94 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + ++ ++L S D + L+ + Sbjct: 95 RI-----LRADFDDFSLMSVYLPSGSSGDERQVKKYEFMRFFEAYITALRKTL------- 142 Query: 203 VPFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNAN 248 +I+GD+N + ++ W + N I + + + Sbjct: 143 PNLIISGDYNICHTAIDIHNPKSNANSSGFLPEEREWMELFLNGGFIDTFRHFNKDPHHY 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDY + Q L + S + SDHCP+ Sbjct: 203 TWWSFRANSRAKNLGWRIDYHLATQAMLPKLKKVSILADAIH-----------SDHCPVL 251 Query: 300 IDYD 303 ++ + Sbjct: 252 LELN 255 >gi|154706938|ref|YP_001424522.1| endonuclease/exonuclease/phosphatase family protein [Coxiella burnetii Dugway 5J108-111] gi|165918872|ref|ZP_02218958.1| endonuclease/exonuclease/phosphatase family protein [Coxiella burnetii RSA 334] gi|154356224|gb|ABS77686.1| endonuclease/exonuclease/phosphatase family protein [Coxiella burnetii Dugway 5J108-111] gi|165917420|gb|EDR36024.1| endonuclease/exonuclease/phosphatase family protein [Coxiella burnetii RSA 334] Length = 255 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 90/294 (30%), Gaps = 51/294 (17%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 ++S+NI+ +R+ + +DADIV LQE+ Sbjct: 3 SLTPKRDAFTVLSYNIHKGFSARYRRFV----------LPDIREALRAIDADIVLLQEVQ 52 Query: 76 SYNAVAKVFPKNTWC------IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 + +++ I S + K H A+ + ++ Sbjct: 53 GKHRKSRLKKFAHADLPQTEFIAESKWPHYMYGKNAVYGSAHHGNALLSNFPFKMVENIN 112 Query: 130 LLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + S S+ +R + +++ ++ V+ IHL F + Q Sbjct: 113 V-----SLSQRASRSILHAIIDYEPTVELHVICIHLGLF-------------RAERDYQL 154 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 L I S P +IAGDFN G + K ++ + + Sbjct: 155 ITLSKRIEAHVPSHAPLIIAGDFNDW--RRGAFNYMEKELELKEVYKVLEGKH---AKTY 209 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + +D L S +S K+LSDH P+ + Sbjct: 210 PASRPTLEVDRIYYRG-----LKLLSGEIFN------ESYWKKLSDHLPLHAKF 252 >gi|29293904|gb|AAO63566.1| RNA editing complex protein MP99 [Trypanosoma brucei] Length = 907 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 88/325 (27%), Gaps = 56/325 (17%) Query: 12 FLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLW---KNSVKRTTSDYTLLRQYAKNLD 65 ++ +R+V+WN+ S G T++ Y L Q + LD Sbjct: 602 LAGSSANPASKEISTLRVVTWNVQ-FSRHSGERTPLGRDGIDWCTSTRYVALAQTLEGLD 660 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-----RDSNNDIHTAIAVRKKN 120 AD++ +QE+ WC + S + + S+ + + + Sbjct: 661 ADVIGMQEVE-----------PAWCKYLSQQPWVREKYAMTCCEHSHAIQPWGVMLLVRR 709 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + ++ S + ++ G + V +HL + + Sbjct: 710 SLCVTSTHHANVPAFSGHTSVMPEVTVVV--SEGVPVTVGSMHLLAPY--------NQNN 759 Query: 181 CSLLSQQAQWLKDWITQKKE---SLVPFVIAGDFNR-------KINYLGNNDDFWKTIDP 230 S + Q L + + ++ GDFN +G D + Sbjct: 760 ISNRTTQLDNLTKRLRTRPPINGKQAGLIVMGDFNDCAKNYFTFPPEMGFKDAWLLLHPD 819 Query: 231 NDSLIRFPKEKDSRCNANKNL----RNKIPIDYFVMDQNAYKFLIQESFSEIL------- 279 + D N D + + + E Sbjct: 820 EGVSSKSGHTIDGDRNPYAAQIIEKEFYGRADRVLFSSRNLQPIQTEIIGTTSVREMGIT 879 Query: 280 --YNEDDIKSRGKRLSDHCPISIDY 302 + D SDH + +++ Sbjct: 880 KQVDIDKDVPEYLYPSDHFGLLVEF 904 >gi|71747102|ref|XP_822606.1| RNA editing 3' exouridylylase MP99 [Trypanosoma brucei TREU927] gi|70832274|gb|EAN77778.1| RNA editing 3' exouridylylase MP99 [Trypanosoma brucei] Length = 907 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 88/325 (27%), Gaps = 56/325 (17%) Query: 12 FLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLW---KNSVKRTTSDYTLLRQYAKNLD 65 ++ +R+V+WN+ S G T++ Y L Q + LD Sbjct: 602 LAGSSANPASKEISTLRVVTWNVQ-FSRHSGERTPLGRDGIDWCTSTRYVALAQTLEGLD 660 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-----RDSNNDIHTAIAVRKKN 120 AD++ +QE+ WC + S + + S+ + + + Sbjct: 661 ADVIGMQEVE-----------PAWCKYLSQQPWVREKYAMTCCEHSHAIQPWGVMLLVRR 709 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + ++ S + ++ G + V +HL + + Sbjct: 710 SLCVTSTHHANVPAFSGHTSVMPEVTVVV--SEGVPVTVGSMHLLAPY--------NQNN 759 Query: 181 CSLLSQQAQWLKDWITQKKE---SLVPFVIAGDFNR-------KINYLGNNDDFWKTIDP 230 S + Q L + + ++ GDFN +G D + Sbjct: 760 ISNRTTQLDNLTKRLRTRPPINGKQAGLIVMGDFNDCAKNYFTFPPEMGFKDAWLLLHPD 819 Query: 231 NDSLIRFPKEKDSRCNANKNL----RNKIPIDYFVMDQNAYKFLIQESFSEIL------- 279 + D N D + + + E Sbjct: 820 EGVSSKSGHTIDGDRNPYAAQIIEKEFYGRADRVLFSSRNLQPIQTEIIGTTSVREMGIT 879 Query: 280 --YNEDDIKSRGKRLSDHCPISIDY 302 + D SDH + +++ Sbjct: 880 KQVDIDKDVPEYLYPSDHFGLLVEF 904 >gi|290961375|ref|YP_003492557.1| hydrolase [Streptomyces scabiei 87.22] gi|260650901|emb|CBG74018.1| putative secreted hydrolase [Streptomyces scabiei 87.22] Length = 607 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 39/328 (11%), Positives = 90/328 (27%), Gaps = 68/328 (20%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++ + ++N+ L + + + ++ DIV L+E+ N Sbjct: 301 GELAVATYNVENLDPSDASFGD---------HAAAIVHHLQS--PDIVALEEIQDNNGAT 349 Query: 82 ------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 K + S + + + +I V Sbjct: 350 NDGTVAADKTVKKLIDAIKAAGGPAYDW-RSIDPVNLADGGEPGGNIRQVFLFNPARVSF 408 Query: 124 LQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 + P + + +R+ + GK ++V+ Sbjct: 409 TDRPGGDATTAVGVTKANGKARLTVSPGRIDPANAAWTNSRKPLVGEFSFRGKSVFVVAN 468 Query: 163 HLKSFCFLDSLENT----YSPSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKIN 216 H S +L + S + QA+ + ++ Q K+ + GD N Sbjct: 469 HFASKGGDQALHSEFQPPKRSSETQRHLQAKAVNTFVKQVLAKDKKASVIALGDINDF-- 526 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 D K ++ L K R + N +D ++ ++ + Sbjct: 527 ---EFSDTAKQLEDGGVLWSAIKSLPKRERYSYVFQGNAQVLDQILVSRSVRRATGF--- 580 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ++SDH P + ++ Sbjct: 581 --TYDSVHINAEFNDQISDHDPQVVRFE 606 >gi|254518588|ref|ZP_05130644.1| exodeoxyribonuclease III Xth [Clostridium sp. 7_2_43FAA] gi|226912337|gb|EEH97538.1| exodeoxyribonuclease III Xth [Clostridium sp. 7_2_43FAA] Length = 251 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 77/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + +Y K +DADI +QE Sbjct: 1 MKLISWNVNGIRSCVTKGF---------------LEYFKEMDADIFCIQESKLQEG-QID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + G R Sbjct: 45 LELEGYHQYWNYAEKKGY----------SGTAIFTKEKPLSVS----YGLGIEEHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + +D++ + Sbjct: 91 -----VITLEFENFYMVTVYTPN-------SKNELARLDYRMVWEDAFRDYLK-VLDEKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + F A Sbjct: 138 PVIVCGDLNVAHKEIDLKNPKTNLRNAGFTEEERSKFTELLNAGFVDTFRYFYPDEVGAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ + L + SDHCP+ Sbjct: 198 SWWSYRFNARAKNAGWRIDYFLVSNSVKDKLEDAKIHSEVL-----------GSDHCPVE 246 Query: 300 IDYD 303 + + Sbjct: 247 LKIN 250 >gi|149191611|ref|ZP_01869856.1| extracellular nuclease-related protein [Vibrio shilonii AK1] gi|148834569|gb|EDL51561.1| extracellular nuclease-related protein [Vibrio shilonii AK1] Length = 872 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 52/376 (13%), Positives = 100/376 (26%), Gaps = 97/376 (25%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDADIVFLQE 73 + +R+ ++N+ N + G + R S++ + LDADIV L E Sbjct: 475 KDLRVATFNVLNYFTSPFGGDENRFGSNRGASNFAEFEVQQEKILNALIKLDADIVGLME 534 Query: 74 MGS-----YNAVAKVFPK---------NTWCIFYSTERLINHS---KRDSNNDIHTAIAV 116 + + A+A++ + + ++ I T + Sbjct: 535 IENNGFGDNGAIAQLVRELNARIDNKKLHYDFVSVDSNQDGVIDKLDAVGSDAITTGVIY 594 Query: 117 RKKNVR------------VLQQSYPLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDI 162 R K V+ V + G + R + ++ G +K+ V Sbjct: 595 RPKQVKLKQVNVLEMPRQVAPEVLDDDGKVIEDGKNYQRNTLAPTFKVKGAKEKLTVAVN 654 Query: 163 HLKS--------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208 H KS + + A L D + K V+ Sbjct: 655 HFKSKGSKCWEDAAPVAEGGQAGKDTDQQGSCENFRVAAAVALGDALEAIKGHK---VVL 711 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK--------------------------- 241 GDFN + + IR + Sbjct: 712 GDFNAYGKEDPLLILTDYSQEKYGKTIRAARNTFIGEQEQFGDDGAVIDHSYGYVNVLGE 771 Query: 242 -DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------- 289 + + +D+ ++ + K ++ + I E + Sbjct: 772 MHPQGWSYSYNDEVGALDHILISPSLSKRVVDATEWHINAAESTLFDYNDEYKGDLPKYQ 831 Query: 290 --KRLSDHCPISIDYD 303 R SDH P ID + Sbjct: 832 DHYRSSDHDPAVIDLN 847 >gi|196032800|ref|ZP_03100213.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus W] gi|195994229|gb|EDX58184.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus W] Length = 352 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 45/322 (13%), Positives = 106/322 (32%), Gaps = 60/322 (18%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T + + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMG----------SYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKK 119 LQE+ + + K P + + ++ K Sbjct: 110 LQEVDIKSMRSFDVNGHEFLKKGLPNYVSSFGKNYDTKWVPVPITSPMGYAEAGLSTFSK 169 Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176 + + L G + R + R VE + +N GK + ++++HL + Sbjct: 170 YTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---------- 219 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 Y + QQ ++LK ++ + E ++ GD+N+ ++ + +D + P+ + Sbjct: 220 YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPDWLVEL 279 Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280 D + ID F++ N ++ ++ + Sbjct: 280 PKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 337 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 SDH P+S + Sbjct: 338 EN----------SDHNPVSAVF 349 >gi|149922986|ref|ZP_01911405.1| endonuclease/exonuclease/phosphatase family protein [Plesiocystis pacifica SIR-1] gi|149816172|gb|EDM75681.1| endonuclease/exonuclease/phosphatase family protein [Plesiocystis pacifica SIR-1] Length = 236 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 31/255 (12%), Positives = 72/255 (28%), Gaps = 34/255 (13%) Query: 46 SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105 + ++ + + +AD+ +QE + + + F + +S + + Sbjct: 9 KPETLRANLRGIAAWIAEANADLACVQEADASSWWSGRFDHVAFLAQHSGLPYVTRACNV 68 Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 + A+ + ++ +F + V + G D+ Sbjct: 69 DGGGLRYGTALLSRWPLEQAWAHTFAPTPPTFRKGF----VISSLRWPGAPELEFDVVSV 124 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 F S +Q + L I Q P ++AGD N G Sbjct: 125 HTDF---------ARASQRRRQVRELAALIRQ---RGRPVIVAGDLNSDWREGGATRLLA 172 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + ++ P +D+ ++ + + + Sbjct: 173 RDLELEAFEPTGPMV----TFPGPGPSPDRRLDWVLISKA--------------FEFSGV 214 Query: 286 KSRGKRLSDHCPISI 300 ++ RLSDH P+ Sbjct: 215 EAVDLRLSDHRPLLA 229 >gi|323141860|ref|ZP_08076721.1| exodeoxyribonuclease III [Phascolarctobacterium sp. YIT 12067] gi|322413607|gb|EFY04465.1| exodeoxyribonuclease III [Phascolarctobacterium sp. YIT 12067] Length = 236 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 34/270 (12%), Positives = 71/270 (26%), Gaps = 64/270 (23%) Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 ++ + DI+ LQE A + ++++ + + AV Sbjct: 6 AEFLQEAAPDIICLQETKMQREQADFV-FPGYEEYWNSAERKGY----------SGTAVF 54 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 K + G R ++ + +++ ++ + + + Sbjct: 55 TKVKPLAVT----YGLGQEEHDKEGR-----VITLEFASFYLVTVYTPNSKDGLARLDYR 105 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNND 222 + Q L ++ P V+ GD N R + Sbjct: 106 MVWEDVFRAYLQEL--------DAKKPVVVCGDLNVAAEEIDLKNPKTNRRNAGFTDEER 157 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQE 273 ++ + F + IDYFV+ L Sbjct: 158 AKFRELKAAGFTDSFRYLHPEEVK-YSWWSYRFKAREKNAGWRIDYFVVSDRIADKLQSA 216 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ SDHCP+SI+ D Sbjct: 217 EIHNEVF-----------GSDHCPVSIELD 235 >gi|225548156|ref|ZP_03769441.1| hypothetical protein RUMHYD_00135 [Blautia hydrogenotrophica DSM 10507] gi|225040687|gb|EEG50933.1| hypothetical protein RUMHYD_00135 [Blautia hydrogenotrophica DSM 10507] Length = 251 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 85/306 (27%), Gaps = 82/306 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N + +Y + +ADI +QE ++ Sbjct: 1 MKFISWNVNGIRACLKKGFE---------------EYFQEANADIFCIQETKCQEGQVEL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++++ +S R Sbjct: 46 -TLPGYHQYWNSAVRKGYSGTAIFAK-----------------------------REPLS 75 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT--QKKES 201 + + +E + ++ V+ + + F F+ + LS + W +D++ K E Sbjct: 76 VSYGIGIEEHDQEGRVITLEYEDFYFVTVYTPNSQNELARLSYRMDWERDFLEYLTKLEE 135 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P V GD N + + + + F + Sbjct: 136 RKPVVWCGDLNVAHQEIDLKNPKTNRKNAGFTDEERACFTKVLESGFIDTFRYFYPDQEG 195 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDYF++ + + ++ + SDHCP Sbjct: 196 IYSWWSYRFRAREKNAGWRIDYFLVSSSLREKMVDAKIHTQVL-----------GSDHCP 244 Query: 298 ISIDYD 303 + +D Sbjct: 245 VELDIT 250 >gi|309389686|gb|ADO77566.1| exodeoxyribonuclease III Xth [Halanaerobium praevalens DSM 2228] Length = 258 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 84/304 (27%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 +R+ SWN+N + + + N DI+ LQE+ + Sbjct: 1 MRIYSWNVNGIRAVKKKGF---------------LDWINNEQPDILGLQEIRIQDHQLKD 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + +++ ++ +A+ K + S + D R Sbjct: 46 DLRDLDNYYSYFN----------FGQKKGYSGVALYTKIEPLNVWSGIGIKRFDYEGR-- 93 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 ++ + ++L+I+ + + + + D+ ++ Sbjct: 94 -------VIGAEFEDFYLLNIYFPNG-------RSSKKRLNYKLDFYDAILDYSENLRKK 139 Query: 202 LVPFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCNA------- 247 VI GD+N + + +D + I+ K Sbjct: 140 GKEVVICGDYNTAHHPIDLHDPASNKKTSGFMPIEREWLDKLEEKGYLDSYRYFNPEKEC 199 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY + LI + SDHCP+ Sbjct: 200 YSWWSYRTKARSRNAGWRIDYHFVSAGLESKLINADILTEV-----------MGSDHCPV 248 Query: 299 SIDY 302 +I Sbjct: 249 TITL 252 >gi|311112410|ref|YP_003983632.1| exodeoxyribonuclease III [Rothia dentocariosa ATCC 17931] gi|310943904|gb|ADP40198.1| exodeoxyribonuclease III [Rothia dentocariosa ATCC 17931] Length = 335 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 25/305 (8%), Positives = 73/305 (23%), Gaps = 66/305 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N + + + + D++ LQE + + Sbjct: 69 MKIATWNVN----------------SIRARADRIEDWLDKTEVDVLALQETKTKDE---- 108 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ + + Sbjct: 109 ------TFPFELFEFLGYEVAHYGLNQWNGVAIASRVGLDSVERT-FPNQPAFGKPGDPA 161 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KES 201 + + + +++ + L Y + + L+ + + Sbjct: 162 EIEARAIGATCNGVRIWSLYVPNGRGLTDPHMAYK------MEWMRQLRTNVNGWLHADP 215 Query: 202 LVPFVIAGDFNRKIN------------------YLGNNDDFWKTIDPNDSLIRFPKEKDS 243 F + GD+N + F+ ++ + Sbjct: 216 AAQFALVGDWNVAPEDTDVWDIDFFRENDLTHVSAPEREAFYALLNDEGLVDPVRPYTQG 275 Query: 244 RCNANKNLRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + ID+ + + D + G SDH P Sbjct: 276 EYTYWDYQAGRFSKNEGMRIDFQLCSPALAARVENAWI-------DREEREGDGASDHTP 328 Query: 298 ISIDY 302 + I+ Sbjct: 329 VVIEL 333 >gi|241949399|ref|XP_002417422.1| CCR4-NOT complex subunit, putative; carbon catabolite repressor protein 4, putative; cytoplasmic deadenylase, putative; glucose-repressible alcohol dehydrogenase transcriptional effector, putative [Candida dubliniensis CD36] gi|223640760|emb|CAX45074.1| CCR4-NOT complex subunit, putative [Candida dubliniensis CD36] Length = 784 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 48/327 (14%), Positives = 87/327 (26%), Gaps = 42/327 (12%) Query: 18 ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + ++S+N + + + LL++ DI+ +QE+ Sbjct: 447 PESSDNFTVLSYNTLCQHYATPKMYKFTPSWALDWDYRKNLLQKEVLGYSTDIICMQEVE 506 Query: 76 SYNAVAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY--- 128 + P T F+S R ++ DS A + ++ + Sbjct: 507 TKTFNEFWLPVMTANGYKGYFFSKTRSKTMNEADSKKVDGCATFFKNDKFSLVHKQNFEY 566 Query: 129 --------PLLGAKDSFSRAGNR----RAVELLVEINGKKIWVLDIHLKSFC-FLDSLEN 175 KD F+R N+ L + +G+KI V++ HL F D Sbjct: 567 NSVCMGSDKYKKTKDLFNRFMNKDNIALISYLQHKESGEKIAVVNTHLHWDPAFNDVKAL 626 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN--------------- 220 L + + + + ++ GDFN + Sbjct: 627 QVGILLEELQGIIKKYRHTNSNEDIKNSSIIVCGDFNSVKDSAVYQLFSTGASKGHEDMN 686 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRC----NANKNLRNKIPIDYFVMD-QNAYKFLIQESF 275 D+ K + K N IDY + Sbjct: 687 GRDYGKFTEEGFHHPFKLKSAYETVGELPFTNLTPAFTDNIDYIWYSTPTLQVKGLLGRV 746 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 E + SDH PI + Sbjct: 747 DEEYTSHSIGFPDANFPSDHVPILAKF 773 >gi|170749328|ref|YP_001755588.1| exodeoxyribonuclease III Xth [Methylobacterium radiotolerans JCM 2831] gi|170655850|gb|ACB24905.1| exodeoxyribonuclease III Xth [Methylobacterium radiotolerans JCM 2831] Length = 264 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 85/302 (28%), Gaps = 64/302 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N L + + D+V LQE+ + Sbjct: 1 MRITTWNVN----------------SIKQRLPHLLGFLEEARPDVVCLQELKCQDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + +A+ + + + G A R Sbjct: 41 ------SFPRADIEAAGYAVETLGQKAYNGVALLVRAPLAMSK--IRRGLPGDADDAQAR 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 L+ + + + V I+L + +DS + Y + + L+ E + Sbjct: 93 YIEALISGADTRPVRVASIYLPNGNPVDSPKYPYKLAF------LERLRLHARALLEDEI 146 Query: 204 PFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 V+AGD+N + F + + + Sbjct: 147 AVVLAGDYNVIPEAADAADPEAWRSDALFLGTTRAAFRAILAEGYTDALRACDPRDGLYT 206 Query: 248 NKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + ID+ ++ A L+ S + + SDH P++ Sbjct: 207 FWDYQAGCWQRNAGIRIDHLLLSPQAGDRLVSASVQKH-------LRGLDKPSDHVPVTA 259 Query: 301 DY 302 + Sbjct: 260 EL 261 >gi|307266821|ref|ZP_07548344.1| exodeoxyribonuclease III Xth [Thermoanaerobacter wiegelii Rt8.B1] gi|306918162|gb|EFN48413.1| exodeoxyribonuclease III Xth [Thermoanaerobacter wiegelii Rt8.B1] Length = 257 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 84/304 (27%), Gaps = 75/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N L Y K ++ADI +QE + Sbjct: 1 MKLVSWNVNGLRACLQKGFM---------------DYFKKVNADIFCIQETKLQPHQTDL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 N + + ++ AV K + + D+ R Sbjct: 46 EELNLEGYYAFWN--------FAEKKAYSGTAVFTKYKPLSVNYGIGIPQHDNEGR---- 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +K ++++ + + + + L +S+ Sbjct: 94 -----VITLEYEKFYLVNTYTPNSQRGLTRLSYRMEWEEDFRNYLLKL--------DSVK 140 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F + +A Sbjct: 141 PIILCGDLNVAHKEIDIKNPSANRRNAGFTDEEREKMTMLLNSGFIDTFRYFYPHKKDAY 200 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ Q +LI SDHCP+ Sbjct: 201 TWWSYMRNAREKNIGWRIDYFIVSQRLKDYLIDAEIH-----------SDVMGSDHCPVV 249 Query: 300 IDYD 303 ++ D Sbjct: 250 LEID 253 >gi|290960579|ref|YP_003491761.1| hydrolase [Streptomyces scabiei 87.22] gi|260650105|emb|CBG73221.1| putative hydrolase [Streptomyces scabiei 87.22] Length = 371 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 88/303 (29%), Gaps = 30/303 (9%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY-----TLLRQYAKNLDAD 67 L + VR+V +G S W + D + +DAD Sbjct: 86 LYTVSPGAGPAVRIV---------AKGRSAWAGWAELVRDDIRWAAVENTARVIAEVDAD 136 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 I+ E+ + + F + + D N+ + + + +S Sbjct: 137 ILLTVEVEDRLTLDR-FNSQVLGGAIGHDPYPFNLLVDGNDSRGIDVGILSRFPVTSVRS 195 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 + +R E VE++G+ +W+L H KS F + +N Sbjct: 196 HIFDPGAGGKP-VFSRDCPEFEVEVSGEPLWILGNHFKSKGFGRAADNDRRRRAQAARV- 253 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ V+AGD N + + + + Sbjct: 254 ----REIYEAALTRSPRVVVAGDLNDSLASPPVRLLLDAGLSEAMTHESYGANPPGTHGT 309 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY-------NEDDIKSRGKRLSDHCPISI 300 K K +DY + ++ + + D + S+ + SDH + Sbjct: 310 GKRDEQK--LDYLLFGPELWERVTNVGVERRGIWAPRTFPSFDTVTSKADQASDHAALFA 367 Query: 301 DYD 303 D D Sbjct: 368 DLD 370 >gi|315497172|ref|YP_004085976.1| exodeoxyribonuclease iii xth [Asticcacaulis excentricus CB 48] gi|315415184|gb|ADU11825.1| exodeoxyribonuclease III Xth [Asticcacaulis excentricus CB 48] Length = 266 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 38/308 (12%), Positives = 78/308 (25%), Gaps = 73/308 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 + + SWNIN + ++ DI+ LQE+ + Sbjct: 3 LSIASWNIN----------------SVRLRIDQVIRFLDMARPDILCLQEIKCQNGEFPR 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K F + + +A+ K + + P A Sbjct: 47 KAFEDAGYPHILV-----------TGQKGWHGVALVSKLPFEINEILPFC----RRGEAR 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + I + + ++ + + + L + L + + Sbjct: 92 VQGIQVA-------GIDLWNFYIPAGGDVPDRQANDKFDHKLEFY--ERLTAHLKTR-NP 141 Query: 202 LVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 P +IAGD N + + F + F + Sbjct: 142 DAPLLIAGDLNIAPGENDVWSHRQMLKVVSHTPPELEAFADLMAAGGFHDAFRELWPEPQ 201 Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ +++ + + I D R SDH Sbjct: 202 KLFTWWSYRAADFRKSNRGLRLDHLLINPALKARITSPIAAVI----HDSVREWDRPSDH 257 Query: 296 CPISIDYD 303 PI I++D Sbjct: 258 APIQIEFD 265 >gi|224418520|ref|ZP_03656526.1| exodeoxyribonuclease LexA [Helicobacter canadensis MIT 98-5491] gi|253826925|ref|ZP_04869810.1| exodeoxyribonuclease LexA [Helicobacter canadensis MIT 98-5491] gi|313142047|ref|ZP_07804240.1| exodeoxyribonuclease LexA [Helicobacter canadensis MIT 98-5491] gi|253510331|gb|EES88990.1| exodeoxyribonuclease LexA [Helicobacter canadensis MIT 98-5491] gi|313131078|gb|EFR48695.1| exodeoxyribonuclease LexA [Helicobacter canadensis MIT 98-5491] Length = 252 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 80/304 (26%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + ++AD+ +QE Sbjct: 1 MKLISWNVNGLRACMNKGFM---------------DFFETVNADVFCIQE-SKMQREQAT 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + ++++ + + +A+ K + + D R Sbjct: 45 FDFPNYEEYWNSAEKKGY----------SGVAIFSKTKPLSVAYDMGIAHHDKEGRI--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + K ++++++ + + + L+ Sbjct: 92 ------ICAEYKDFYLVNVYTPNSKRELERLSYRMEWEDDFRAYLKNLEK--------TK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + F + A Sbjct: 138 PVIVCGDLNVAHQEIDLKNPKTNRRNAGFTDEEREKMTQLLDSGFTDTFRHFYPTLEGAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ + L+ ++ SDHCP+ Sbjct: 198 SWWSYMGKARENNTGWRIDYFLCSKALDSKLLDAKIYPEVF-----------GSDHCPVG 246 Query: 300 IDYD 303 ++ + Sbjct: 247 LEIN 250 >gi|115689672|ref|XP_796533.2| PREDICTED: similar to CCR4 carbon catabolite repression 4-like [Strongylocentrotus purpuratus] gi|115945120|ref|XP_001179947.1| PREDICTED: similar to CCR4 carbon catabolite repression 4-like [Strongylocentrotus purpuratus] Length = 365 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 37/295 (12%), Positives = 86/295 (29%), Gaps = 41/295 (13%) Query: 18 ASVAQKVRLVSWNINTLS---EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +VR+++WNI + + + + + D D+V LQE+ Sbjct: 101 PARDARVRVMAWNILADALSMGADNFIKCPKESLLWDNRKYAIIEEILTYDPDVVCLQEV 160 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 Y F + + +S + + V + + ++ Sbjct: 161 DHYE-----------DFFLPVLQQVGYSGAFNPKPDSPCLEVDYNGKKFVSNQVAVMHHL 209 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 S ++ + HLK+ +++ ++Q Q L + Sbjct: 210 KCISEKLL-----------DEEFCIATTHLKAKHGYETM----------RAKQGQHLIEV 248 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + +P ++ GDFN + + ++ + + ++ Sbjct: 249 LKKC-SKNLPLIVGGDFNAEPTEDVYSVYETSDLNLASAYKKLSEDGMQEPPYTTWKIRP 307 Query: 255 IP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY Q + + F + SDH + D+ F Sbjct: 308 RREECHTIDYMWYTQEHLEPVALLRFPGEKEIGSERLPSWSYPSDHLSLVCDFVF 362 >gi|324515144|gb|ADY46104.1| Neutral sphingomyelinase [Ascaris suum] Length = 426 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 43/295 (14%), Positives = 85/295 (28%), Gaps = 35/295 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++ N L + W + + L + + + DI+ LQE+ S ++ Sbjct: 15 LRVITLNCWALPQP-----WPVGSRDRQYRLSKLCEALLSTNYDIISLQEIWSVRDFDRI 69 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS---RA 140 ++ I R V L Y L G Sbjct: 70 ------NSAIKDVYPYSYYFHSGFTGSGVCIFSRHAIVSTLMHRYSLNGFAHHIHRGDWF 123 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 G + + +EI +I HL + + QA L ++ Sbjct: 124 GGKVVGMVQLEIGTYRINFYATHLHA-----EYDRENDLYLPHRLSQAFELSQFVKHTSH 178 Query: 201 SLVPFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 + ++ GDFN + + LG D + + + ++ C +NL Sbjct: 179 AADLTILTGDFNLEPDDLGYRLIVDNANLIDAWLARPNKSGCETGMTCDRPDNCYTARNL 238 Query: 252 RNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +DY + + + SDH + D+ Sbjct: 239 KQPNPAGKRLDYIMYKCG---KSDVDLVMCENRLGRIPGDKQINYSDHLGVYADF 290 >gi|260459328|ref|ZP_05807583.1| exodeoxyribonuclease III [Mesorhizobium opportunistum WSM2075] gi|259034882|gb|EEW36138.1| exodeoxyribonuclease III [Mesorhizobium opportunistum WSM2075] Length = 281 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 86/305 (28%), Gaps = 71/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++N+N ++ +L ++ DIV LQE+ + + Sbjct: 22 IRVATFNVNGVNG----------------RLPVLLKWLGETQYDIVCLQELKTSDE---- 61 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + +A+ + + ++ L G D Sbjct: 62 ------KFPAEAIRNAGYGAIWHGQKSYNGVAILARGKQPQERRRGLPGDVDDTHSRY-- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + + V ++L + + Y + + L D+ Sbjct: 114 ------IEADIDGLVVGCLYLPNGNPAPGPKFDYK------LRWFERLIDYGRLLIRDSP 161 Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 V+ GD+N + + + + + + + Sbjct: 162 ASVLCGDYNVVPAPIDAAVPARWLSDAVYFPESRQAYAEMLAEGWIDAVRLIQPERGVYT 221 Query: 248 NKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N + +D+ ++ + + L + ++ SDH P Sbjct: 222 YWNFSYRGGYDRSSGLRMDHLLVSPSLRERLGGAGVDVAV-------RGWEKPSDHAPAW 274 Query: 300 IDYDF 304 I+ D+ Sbjct: 275 IELDW 279 >gi|149908150|ref|ZP_01896814.1| hypothetical protein PE36_01552 [Moritella sp. PE36] gi|149808692|gb|EDM68625.1| hypothetical protein PE36_01552 [Moritella sp. PE36] Length = 342 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 42/338 (12%), Positives = 96/338 (28%), Gaps = 60/338 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +++ ++N+ E + ++ +R Y D++ QE+ S +++ Sbjct: 2 LKIATFNLFNYIEPPFACYDFDRIYDEQQWQKKQKWIRDYLAEHQPDVIGFQEVFSPDSL 61 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV---RVLQQSYPLLGAKDSF 137 + + + ++ + + AIA R V+ + S Sbjct: 62 KALVAECDYP-YFEVVDSADVIEDYIFRSPVVAIASRYPITAIAAVIPDGDLAVSMGLSS 120 Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFC-------------------FLDSLENTY 177 +R+ + +E+ +H KS F + ++ Sbjct: 121 EYQFSRKPLRASIELPHLGTTDCYVVHFKSKRPMLESEDNELATTKAVLDAFSKQMCGSW 180 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN------------------YLG 219 S S+ A + I ++ + P ++ GDFN ++ Sbjct: 181 GSSMQRGSEAALLFQQMIQRRLATNNPMMLMGDFNDVLDHDRDGILSHLTMNTLRFNSDP 240 Query: 220 NNDDFWKTIDPNDSLIRFPKEK---------DSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 D K DS + R + +DY ++ Sbjct: 241 QAQDIVKQFSLQDSWHLYQHAANGVVASSTPAPRPATHYFYNKGSVLDYILLSCEFNAEY 300 Query: 271 IQESFSEILYNEDDIK------SRGKRLSDHCPISIDY 302 + + Y+ D R +DH + I+ Sbjct: 301 QRSLYEVSDYHTYDRHLINPIYERDSESTDHAVVQINL 338 >gi|37993837|gb|AAR07000.1| sphingomyelinase [Bacillus thuringiensis] Length = 252 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 84/230 (36%), Gaps = 26/230 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230 Q + ++D+I + + +I GD N N +KT++ Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNA 247 >gi|19703399|ref|NP_602961.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328758|ref|ZP_06871272.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19713467|gb|AAL94260.1| Exodeoxyribonuclease III [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296154093|gb|EFG94897.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 253 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 81/305 (26%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + + Y +ADI LQE +A Sbjct: 1 MKLISWNVNGIRA---------------AIKKGFLDYFNEQNADIFCLQETK-LSAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + G R Sbjct: 45 LELKGYHQYWNYAEKKGY----------SGTAIFTKQEPLSVS----YGLGIEEHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +K +++ ++ + + ++ ++ Sbjct: 91 -----VITLEFEKFYMVTVYTPN-------SKDELLRLDYRMVWEDEFRKYLKNLEKKK- 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + + + F + Sbjct: 138 PVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKFTELLDSGFIDTFRYFYPNLEQVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + K L+ SDHCP+ Sbjct: 198 SWWSYRGRARENNAGWRIDYFVVSKGLEKSLVDAEIH-----------SQIEGSDHCPVV 246 Query: 300 IDYDF 304 + +F Sbjct: 247 LFLEF 251 >gi|29654239|ref|NP_819931.1| endonuclease/exonuclease/phosphatase family protein [Coxiella burnetii RSA 493] gi|29541505|gb|AAO90445.1| endonuclease/exonuclease/phosphatase family protein [Coxiella burnetii RSA 493] Length = 255 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 90/294 (30%), Gaps = 51/294 (17%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 ++S+NI+ +R+ + +DADIV LQE+ Sbjct: 3 SLTPKRDAFTVLSYNIHKGFSARYRRFV----------LPDIREALRAIDADIVLLQEVQ 52 Query: 76 SYNAVAKVFPKNTWC------IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 + +++ I S + K H A+ + ++ Sbjct: 53 GKHHKSRLKKFAHADLPQTEFIAESKWPHYMYGKNAVYGSAHHGNALLSNFPFKMVENIN 112 Query: 130 LLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + S S+ +R + +++ ++ V+ IHL F + Q Sbjct: 113 V-----SLSQRASRSILHAIIDYEPTVELHVICIHLGLF-------------RAERDYQL 154 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 L I S P +IAGDFN G + K ++ + + Sbjct: 155 ITLSKRIEAHVPSHAPLIIAGDFNDW--RRGAFNYMEKELELKEVYKVLEGKH---AKTY 209 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + +D L S +S K+LSDH P+ + Sbjct: 210 PASRPTLEVDRIYYRG-----LKLLSGEIFN------ESYWKKLSDHLPLHAKF 252 >gi|148234330|ref|NP_001081058.1| deoxyribonuclease I [Xenopus laevis] gi|12249029|dbj|BAB20384.1| deoxyribonuclease I [Xenopus laevis] Length = 350 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 90/301 (29%), Gaps = 29/301 (9%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 ++ + C ++ S+NI S LL + + Sbjct: 3 FLVLVAMTACFLQAGFAFKIASFNIQRFSMT---------KVDDPVVLELLIRILSRYE- 52 Query: 67 DIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 I+ ++E+ A+ + + + + LI+ S+ A R+ V+ Sbjct: 53 -IIAIEEVMNADNTAIISLVKELSLATKLNYNVLISDHLGRSSYREKYAYVYREDIVKPT 111 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + + G ++ + + R + + S + +L Sbjct: 112 EWYHFDDGCENCGTDSFIREPFVARFT----SLTTVVKDFALISIHTSPDYAIMEVDALY 167 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + + +I GD+N +Y+ + + + L+ +K+ Sbjct: 168 DAWVDAKQRL------KMENILILGDYNAACSYVASRHWPIIRLRHVEELVWLIGDKEDT 221 Query: 245 CNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISID 301 + D V + ++ ++ Y+ + K +SDH P+ ++ Sbjct: 222 TVSTNTN---CAYDRMVAGGEELQRGIVPDTAKAFNYHVAYDLTYEMAKAVSDHYPVEVE 278 Query: 302 Y 302 Sbjct: 279 L 279 >gi|260428188|ref|ZP_05782167.1| endonuclease/exonuclease/phosphatase [Citreicella sp. SE45] gi|260422680|gb|EEX15931.1| endonuclease/exonuclease/phosphatase [Citreicella sp. SE45] Length = 304 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 42/298 (14%), Positives = 90/298 (30%), Gaps = 39/298 (13%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P A +R+ + N++ + + G + L L AD++ QEM Sbjct: 34 PLPEPHADTLRVATLNVHYIDLRSGGEGPWSLAG-WERRKAALGDTVAALKADVIAFQEM 92 Query: 75 GSYNAVAKVFPKNT--WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------Q 126 S+ + + + + I R +R+ Sbjct: 93 ESFRGGDDDSDNLARGYLLGRLPGFEAAATGDWRSFPSTQPIFYRTDRLRLEDQGWFFFS 152 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 P + +F + A G++ ++++HL+ S S Sbjct: 153 ETPEVIYSRTFDGSWPAFASWAEFTPVGGGQRFRLVNVHLEY------------RSASNR 200 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + A+ + +T ++ P ++AGD N + + RFP+ + Sbjct: 201 RRSAELIARRLTAVIDAGTPVILAGDLNALRGWRVMRILQDAGL-------RFPRVPAAT 253 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + N+ + ID+ ++ G +DH P+ +D Sbjct: 254 YHLNRGVHLLPAIDHI----GLAGLDATGGPYV-----PQMQPGGVWPTDHHPVVLDL 302 >gi|302346017|ref|YP_003814370.1| endonuclease/exonuclease/phosphatase family protein [Prevotella melaninogenica ATCC 25845] gi|302149189|gb|ADK95451.1| endonuclease/exonuclease/phosphatase family protein [Prevotella melaninogenica ATCC 25845] Length = 355 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 45/335 (13%), Positives = 92/335 (27%), Gaps = 79/335 (23%) Query: 2 IRKYVLALVFFLV---------PCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKR 49 +R L L+ FL+ P + ++++S+N+ S KN Sbjct: 56 LRTIWLPLLGFLLCYGPIRTYSPFNIPEDKPHGAIKVLSYNVFMFSSWSEPDAKKNP--- 112 Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 + Y ADIV LQE + + + +I + Sbjct: 113 -------IVDYIVKSKADIVCLQEAQATLDDKDHIYSTLKKHYPYFKLMIKKAPGADY-- 163 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 + + K + Q + P + + ++I G V++ H +S Sbjct: 164 ----MVLLSKYPVLWQDTIPYGSSSNQSVAYM--------LDIKGTNTLVVNNHFESNGL 211 Query: 170 LDSLEN------------------------TYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + + + QA+ + ++ + + VP Sbjct: 212 SSGDKEGFKTLVKGELKTGEAKRQSVHLITKLGDVSARRAPQAETVARYVKKYLDKKVPV 271 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 ++ GDFN + K ++ F + + + ID+ + Sbjct: 272 ILCGDFNDSP-LSYTHRTIAKELND-----CFVESGNGPGISYHKSGMYFRIDHIFCSDD 325 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + SDH PI Sbjct: 326 FDSY----GAKVDNSVTT---------SDHYPIYC 347 >gi|222086336|ref|YP_002544869.1| endonuclease/exonuclease/phosphatase family protein [Agrobacterium radiobacter K84] gi|221723784|gb|ACM26940.1| endonuclease/exonuclease/phosphatase family protein [Agrobacterium radiobacter K84] Length = 370 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 46/367 (12%), Positives = 99/367 (26%), Gaps = 86/367 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKR--------------------------TTSDYTL 56 +RL ++N+ L + + ++N +++ T + Sbjct: 2 SLRLATFNVENLLTRFDYTGFRNQLRQDRVLKLFDVKNENIYQQLEAARVVAATDDTRQM 61 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + +ADI+ LQE+ S A+ + + + R + + + I A+ + Sbjct: 62 TALAIADANADIICLQEVDSMAALQAFEYGYLYRMVGNGYRQKFLIEGNDSRGIDVAVMM 121 Query: 117 R--------------KKNVRVLQQSYPLLGAK------DSFSRAGNRRAVELLVEINGKK 156 R K + V + + L + + R +EL + I G Sbjct: 122 REQTSDGQPIVLKDIKSHAMVTYRDFDLFTDELAALGLHEDDKIFKRDCLELDLTIGGVP 181 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP----FVIAGDFN 212 + +HLKS + + + + ++ I + + F I GD N Sbjct: 182 FSLYVVHLKSMGPAREGVDGRQSTMPVRRAETLAVRHIIETRFGAGHTAAKNFAICGDMN 241 Query: 213 R----------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI- 255 + + + + R Sbjct: 242 DYQERVDVIGTRHTGYRFEHRDEEASALDVFSHDGFVENVMRRRDELDRWTLYHARGPQE 301 Query: 256 ----PIDYFVMDQNAYKFLIQESFSEI---------------LYNEDDIKSRGKRLSDHC 296 +DY + + + + + SDHC Sbjct: 302 QWLCQLDYIWLSPALARANAARLPDVVRSGQPFRTIFPPGQEVERYPRTGWDRPKASDHC 361 Query: 297 PISIDYD 303 PI + D Sbjct: 362 PIVMTLD 368 >gi|90420403|ref|ZP_01228310.1| endonuclease/exonuclease/phosphatase [Aurantimonas manganoxydans SI85-9A1] gi|90335131|gb|EAS48884.1| endonuclease/exonuclease/phosphatase [Aurantimonas manganoxydans SI85-9A1] Length = 248 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 71/284 (25%), Gaps = 58/284 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--- 80 +R V+WN + + D L DI+ LQE+ + + Sbjct: 16 IRAVTWNCHG-----------SIGADRRCDPDRTLATIARLGPDILALQEVDGRSHLGRR 64 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + F + + I ++ D + + V + L Sbjct: 65 QRAFETLGQELLKTAGSQIVEARTVPREDRDYGHLLWSRWPIVSATIHTLPEPG-----V 119 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R A+E +V + VL HL QAQ+L + + Sbjct: 120 EPRAAIEAVVAAPSGHLRVLAFHLGLL-------------RRQRRAQAQFLAERVD---A 163 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 VP + GD N D R P R + +D Sbjct: 164 RDVPTLAMGDGN---------DLRLGGALHGALAPRLPVHTAPRSFPARWPML--RLDRI 212 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + SDH + D + Sbjct: 213 YASEGF------------SLVTHGPGHASRPASDHLAVMADLAW 244 >gi|315182338|gb|ADT89251.1| endonuclease/exonuclease/phosphatase family protein [Vibrio furnissii NCTC 11218] Length = 322 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 91/315 (28%), Gaps = 37/315 (11%) Query: 23 KVRLVSWNI-NTLSEQEGVSLWKNS--VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +VR + N+ N L+ + N + L Q L+AD++ QE+ S +A Sbjct: 2 QVRFATANLFNYLAPPNAFYEFNNIYEQTQWQQKQRWLSQKLTTLNADVIGFQEVFSPHA 61 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + ++ + S + IA R V L F R Sbjct: 62 LRDQVAALGYP-YFEVIDTPHVSDDYIYSSPVVGIASRFPLSEVAAVETSL--DGFHFHR 118 Query: 140 AGNRRAV----------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 R + ++ + + + I S Q+A Sbjct: 119 KPLRATLNHPALGQVDVYVVHFKSQRPMLHEPISDTLVDAWQQELRGRWQSAMQRGQEAH 178 Query: 190 WLKDWI-TQKKESLVPFVIAGDFNRKINY--------------LGNNDDFWKTIDPNDSL 234 L I +K++ P V+ GDFN+ ++ + Sbjct: 179 LLHQAIVQRKQQRQHPVVLMGDFNQVLSSMEFAALRATHRFRQPETCRPLIPYHLLDSWT 238 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI------KSR 288 + + R + +DY ++ + Y+ +D Sbjct: 239 LYSHSGDEQRQPTHYTGAAGQVLDYILLSSEFSRDADYPIALVSDYHVEDQHLINPHFDT 298 Query: 289 GKRLSDHCPISIDYD 303 + SDH +S+ + Sbjct: 299 DRFASDHALVSVTVE 313 >gi|118480154|ref|YP_897305.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis str. Al Hakam] gi|196047577|ref|ZP_03114786.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus 03BB108] gi|118419379|gb|ABK87798.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis str. Al Hakam] gi|196021611|gb|EDX60309.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus 03BB108] Length = 352 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 46/327 (14%), Positives = 107/327 (32%), Gaps = 70/327 (21%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T + + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMG----------SYNAVAKVFPKN------TWCIFYSTERLINHSKRDSNNDIHTAI 114 LQE+ + + K P + + + N + Sbjct: 110 LQEVDIKSLRSFDVNGHEFLKKGLPNYVSSFGKNYDTKWVPVPITNPMGYA-----EAGL 164 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLD 171 + K + + L G + R + R VE + +N GK + ++++HL + Sbjct: 165 STFSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA----- 219 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 Y + QQ ++LK ++ + E ++ GD+N+ ++ + +D + P Sbjct: 220 -----YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPE 274 Query: 232 DSLIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESF 275 + D + ID F++ N ++ Sbjct: 275 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQG 332 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + SDH P+S + Sbjct: 333 KDLKFEN----------SDHNPVSAVF 349 >gi|148251797|ref|YP_001236382.1| putative exodeoxyribonuclease III (xthA) [Bradyrhizobium sp. BTAi1] gi|146403970|gb|ABQ32476.1| putative exodeoxyribonuclease III (xthA) [Bradyrhizobium sp. BTAi1] Length = 271 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 74/306 (24%), Gaps = 64/306 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + L +WNIN L+ + K + D++ LQE + Sbjct: 3 LVLTTWNIN----------------SVRLRIDLVAKLIKQVRPDVLCLQE---TKCIDDA 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + RL + + +AV K + G + + +R Sbjct: 44 FPLKRFK------RLGYEHIALNGQKGYHGVAVISKWP------FDSTGVRTFCDKVDSR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 E ++ + D + +P Q +K Sbjct: 92 HISVAFGEKAQLARPLVLHNFYVPAGGDIPDPALNPKFEHKLQFLDEMKACEPLHPRGDD 151 Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N + + + Sbjct: 152 RHILVGDLNVAPHEHDVWSHKQLLKVVSHTPIECEKLLAAQSHGAWVDVARERIPMSEKV 211 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + + ++ +R SDH P Sbjct: 212 YTWWSYRAADWTVGNRGRRLDHIWVSRALKD-------NVTDFSILRDARSWERPSDHVP 264 Query: 298 ISIDYD 303 +++ D Sbjct: 265 VTVTLD 270 >gi|297193885|ref|ZP_06911283.1| exodeoxyribonuclease [Streptomyces pristinaespiralis ATCC 25486] gi|197720247|gb|EDY64155.1| exodeoxyribonuclease [Streptomyces pristinaespiralis ATCC 25486] Length = 277 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 75/305 (24%), Gaps = 67/305 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + S N+N L ++ AD+V LQE+ Sbjct: 14 LTVTSVNVNGLRAAAKKGF---------------VEWLATTAADVVCLQEVR-------- 50 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ + + D R Sbjct: 51 AEADQLPPEVRNPDGRFTVYAPAAAKGRAGVALFTRREPDAVRIGFGSSEFDGSGR---- 106 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ G + V ++L S ++ S + L+ Sbjct: 107 ---YVEADLPG--VTVASLYLPSGEVGTERQDEKMRFMSEFLPYLKELRAR---SAADGR 158 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 V+ GD+N + + + + + + Sbjct: 159 EVVVCGDWNIAHHEADLKNWKSNRKNSGFLPEEREWLGRVFSEAEYVDVVRDLHPDQEGP 218 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY V + ++ + + G+R SDH P+ Sbjct: 219 YTWWSYRGRAFDNDSGWRIDYQVATPGLARRAVKAWV-------ERAATHGERWSDHAPV 271 Query: 299 SIDYD 303 + Y+ Sbjct: 272 TAVYE 276 >gi|116749760|ref|YP_846447.1| exodeoxyribonuclease III Xth [Syntrophobacter fumaroxidans MPOB] gi|116698824|gb|ABK18012.1| Exodeoxyribonuclease III [Syntrophobacter fumaroxidans MPOB] Length = 265 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 79/303 (26%), Gaps = 72/303 (23%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 ++ ++N+N S + ++ D + LQE+ NA Sbjct: 4 KVATFNVNG----------------IRSRMAPVLEWLDRHRPDALCLQELKCQNA----- 42 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 R + +AV ++ LL D R Sbjct: 43 -----DFPLDAFRKAGYFAAFRGQKAFNGVAVLSRSEPSEV----LLEFGDGKPDEEAR- 92 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + V++NG IW+++ ++ + Y LK W+ + E P Sbjct: 93 --LIAVKLNG--IWIVNTYVPQGRSPEEPAFEYKLDFFGR------LKSWLDGRFEPSQP 142 Query: 205 FVIAGDFNRKINYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNANKN 250 V GD N + D L+ ++ Sbjct: 143 LVWTGDINVAPEAIDLFDPKRLAGKVSFHPREHEALAAVAAWGLVDVFRKLHPDTKQFTF 202 Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +D+ + ++ D + SDH P+ Sbjct: 203 WDYRLPQSFKRNLGWRLDHIYATRTLADACLECQA-------DGEPRGRETPSDHTPVWA 255 Query: 301 DYD 303 ++D Sbjct: 256 EFD 258 >gi|313835987|gb|EFS73701.1| putative exodeoxyribonuclease III [Propionibacterium acnes HL037PA2] gi|314929662|gb|EFS93493.1| putative exodeoxyribonuclease III [Propionibacterium acnes HL044PA1] gi|314970515|gb|EFT14613.1| putative exodeoxyribonuclease III [Propionibacterium acnes HL037PA3] gi|328906267|gb|EGG26042.1| exodeoxyribonuclease III [Propionibacterium sp. P08] Length = 297 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 42/320 (13%), Positives = 77/320 (24%), Gaps = 64/320 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ S+NIN + ++ D D+V LQE+ A + Sbjct: 1 MRIASFNINGIRAALKRGF---------------SEWMAARDCDVVGLQEVRCRPA--DL 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-----------VRVLQQSYPLLG 132 S + TA A + + + Sbjct: 44 PEGAFGDRHVSWAPGSLAGRNGVALLTRTAPAEVRSWGTHLVMAPGQTPNLDEVVTGNTD 103 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT----YSPSCSLLSQQA 188 + + V++ + V ++L D + L+ Sbjct: 104 GLPTELLPFAEEGRYIEVDLADSLLTVACLYLPKGATPDPTNEKAIAKQDRKMAFLAGFR 163 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPND 232 L + F++ GDFN F + P+ Sbjct: 164 DHLTRRCQECAAQGRHFLVIGDFNIAHENADLKNWKANQHNEGFLPEERQWFDTIVSPDT 223 Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + IDY + K + D Sbjct: 224 LVDVLRAQHPDINGPYSWWSWRGKAFINDAGWRIDYHLASPELAKRAVTTEI-------D 276 Query: 284 DIKSRGKRLSDHCPISIDYD 303 S +R SDH + +DYD Sbjct: 277 RDSSYAERTSDHAAVVVDYD 296 >gi|229099528|ref|ZP_04230456.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29] gi|229118593|ref|ZP_04247945.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3] gi|228664785|gb|EEL20275.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3] gi|228683824|gb|EEL37774.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29] Length = 352 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 44/322 (13%), Positives = 106/322 (32%), Gaps = 60/322 (18%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T ++ + + +N ++D Sbjct: 50 AQGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMG----------SYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKK 119 LQE+ + + K P + + ++ K Sbjct: 110 LQEVDIKSMRSFDINGHEFLKKGLPDYASSFGKNYDTKWVPVPITSPMGYADAGLSTFSK 169 Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENT 176 + + L G + R + R VE + +N K ++++HL + Sbjct: 170 YTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHKIPVNNGKFVRLVNLHLSA---------- 219 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 Y + QQ ++LK+++ + ++ ++ GD+N+ I+ + +D + P + Sbjct: 220 YDEGGKIRKQQVEYLKEYMNKHYKNGDYVIMGGDWNQLISNVQLSDPKFVKERPEWLVEL 279 Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280 D + ID F++ N ++ ++ + Sbjct: 280 PKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 337 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 SDH P+S + Sbjct: 338 EN----------SDHNPVSAVF 349 >gi|225867057|ref|YP_002752435.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus 03BB102] gi|225788608|gb|ACO28825.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus 03BB102] Length = 352 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 46/327 (14%), Positives = 107/327 (32%), Gaps = 70/327 (21%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T + + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFTL 109 Query: 71 LQEMG----------SYNAVAKVFPKN------TWCIFYSTERLINHSKRDSNNDIHTAI 114 LQE+ + + K P + + + N + Sbjct: 110 LQEVDIKSLRSFDVNGHEFLKKGLPNYVSSFGKNYDTKWVPVPITNPMGYA-----EAGL 164 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLD 171 + K + + L G + R + R VE + +N GK + ++++HL + Sbjct: 165 STFSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA----- 219 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 Y + QQ ++LK ++ + E ++ GD+N+ ++ + +D + P Sbjct: 220 -----YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPE 274 Query: 232 DSLIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESF 275 + D + ID F++ N ++ Sbjct: 275 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQG 332 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + SDH P+S + Sbjct: 333 KDLKFEN----------SDHNPVSAVF 349 >gi|37993810|gb|AAR06982.1| sphingomyelinase [Bacillus cereus] Length = 252 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 83/230 (36%), Gaps = 26/230 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 VSTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKENDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230 Q + ++D+I + + +I GD N +KT++ Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNA 247 >gi|288962299|ref|YP_003452594.1| hypothetical protein AZL_d02240 [Azospirillum sp. B510] gi|288914565|dbj|BAI76050.1| hypothetical protein AZL_d02240 [Azospirillum sp. B510] Length = 269 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 34/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +WNI++ + + Q ++LD D++ LQE+ Sbjct: 32 SPVPDGMTAFSVATWNIHSCVGLDARFAPD-----------RVAQVIRDLDVDLIGLQEV 80 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 G ++ + + ++ + + S H + + + L Sbjct: 81 GWHHRGESGMDQFAFLEQHTGLKAYAAPTKHSARA-HYGNCLLTRLPVRSMEPIDL---- 135 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 S + R ++ ++E+ G+ + V+ HL + ++Q + Sbjct: 136 -SVGKREPRGGIDAVIEVRGRPVRVIVAHLGLDPW-------------ERAKQVSDIVSR 181 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + ++ +P + GD N + + + Sbjct: 182 VERQPA--LPTLFMGDLNEWTPSSPRLRQLASSFADV-----------ANPRSFHARMPT 228 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + +I E +R SDH P+ Sbjct: 229 LRLDRIYVTGGL----------QIPAFEVVRTILTRRASDHLPVRAVL 266 >gi|213623922|gb|AAI70402.1| Deoxyribonuclease I [Xenopus laevis] gi|213625346|gb|AAI70400.1| Deoxyribonuclease I [Xenopus laevis] gi|213626040|gb|AAI70148.1| Deoxyribonuclease I [Xenopus laevis] Length = 350 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 90/301 (29%), Gaps = 29/301 (9%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 ++ + C ++ S+NI S LL + + Sbjct: 3 FLVLVAMTACFLQAGFAFKIASFNIQRFSMT---------KVDDPVVLELLIRILSRYE- 52 Query: 67 DIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 I+ ++E+ A+ + + + + LI+ S+ A R+ V+ Sbjct: 53 -IIAIEEVMNADNTAIISLVKELSLATKLNYNVLISDHLGRSSYREKYAYVYREDIVKPT 111 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + + G ++ + + R + + S + +L Sbjct: 112 EWYHFDDGCENCGTDSFIREPFVARFT----SLTTVVKDFALISIHTSPDYAIMEVDALY 167 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + + +I GD+N +Y+ + + + L+ +K+ Sbjct: 168 DAWVDAKQRL------KMENILILGDYNAACSYVASRHWPIIRLRHVEELVWLIGDKEDT 221 Query: 245 CNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISID 301 + D V + ++ ++ Y+ + K +SDH P+ ++ Sbjct: 222 TVSTNTN---CAYDRMVAGGEELQRGIVPDTAKAFNYHVAYDLTYEMAKAVSDHYPVEVE 278 Query: 302 Y 302 Sbjct: 279 L 279 >gi|254828780|ref|ZP_05233467.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL N3-165] gi|258601187|gb|EEW14512.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL N3-165] Length = 256 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 78/285 (27%), Gaps = 35/285 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + ++NI K TL + D + ++E + + Sbjct: 2 FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEEPLLPQ-MRDM 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 W F + ++ + P + + S + R Sbjct: 54 KEMQDWDYFGVGRDDGFEKGEFTAVFYNSTRFTLLQEGHFWLSETPDVPSIHSTAM-FPR 112 Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V + +GK+ ++ + HL A L Sbjct: 113 ICVWGKFADSDGKQFYIFNTHLDHIS-------------EEARLFASQLLLKKAATIAEN 159 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDY 259 P +I GDFN + + N K D + K + + LR+ IDY Sbjct: 160 SPVIILGDFNTEPDTPTYNFITKKYQDAQLISQKHAKGPIGSFHDFRPLRSINELEKIDY 219 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + F Y + G SDH P++ + D+ Sbjct: 220 IFVSEE---------FQVCTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|6978769|ref|NP_037229.1| deoxyribonuclease-1 precursor [Rattus norvegicus] gi|118921|sp|P21704|DNAS1_RAT RecName: Full=Deoxyribonuclease-1; AltName: Full=Deoxyribonuclease I; Short=DNase I; Flags: Precursor gi|15420824|gb|AAK97471.1|AF397150_1 deoxyribonuclease I variant 1 [Rattus norvegicus] gi|15420826|gb|AAK97472.1|AF397151_1 deoxyribonuclease I variant 2 [Rattus norvegicus] gi|2439951|gb|AAB71495.1| deoxyribonuclease I [Rattus norvegicus] gi|58476417|gb|AAH89764.1| Deoxyribonuclease I [Rattus norvegicus] gi|149042671|gb|EDL96308.1| deoxyribonuclease I, isoform CRA_a [Rattus norvegicus] gi|149042672|gb|EDL96309.1| deoxyribonuclease I, isoform CRA_a [Rattus norvegicus] gi|149042673|gb|EDL96310.1| deoxyribonuclease I, isoform CRA_a [Rattus norvegicus] gi|149042674|gb|EDL96311.1| deoxyribonuclease I, isoform CRA_a [Rattus norvegicus] Length = 284 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 89/288 (30%), Gaps = 32/288 (11%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +R+ ++NI T ++ + + + + DI +QE+ + V Sbjct: 20 AATLRIAAFNIRTFG---------DTKMSNATLSSYIVKILSRY--DIAVVQEVRDTHLV 68 Query: 81 A--KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 A K+ + I + +I+ + R V VL + G + + Sbjct: 69 AVGKLLDELNRDIPDNYRYIISEPLGRKSYKEQYLFVYRPSQVSVLDSYHYDDGCEPCGN 128 Query: 139 RAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 +R + ++ + L S E L +Q L+D Sbjct: 129 DTFSREPAIVKFFSPYTEVREFAIVPLHSAPTEAVSEIDALYDVYLDVRQKWGLED---- 184 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 + GDFN +Y+ ++ + + + + + Sbjct: 185 -------IMFMGDFNAGCSYVTSSQWSSIRLRTSPIFQWLIPDSADTTATSTHCAY---- 233 Query: 258 DYFVMDQNAYK-FLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302 D V+ + ++ S + + + + +SDH P+ + Sbjct: 234 DRIVVAGALLQAAVVPSSAVPFDFQAEYRLTNQMAEAISDHYPVEVTL 281 >gi|320010283|gb|ADW05133.1| exodeoxyribonuclease III Xth [Streptomyces flavogriseus ATCC 33331] Length = 271 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 36/273 (13%), Positives = 70/273 (25%), Gaps = 50/273 (18%) Query: 58 RQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 ++ +A+++ LQE+ + +V W Y+ + I Sbjct: 21 VEWLGRTEAEVICLQEVRAEAQQLPDEVREPEGWHAVYAPAAAKGRAG--------VGIL 72 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 R+ RV R + V++ G + V ++L S + Sbjct: 73 TRRAPERVQIGFGGFEVPGSEEFDTSGR---YIEVDLPG--VTVASLYLPSGEVGTERQE 127 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LG 219 + Q LK V+ GD+N Sbjct: 128 EKERFMAAFLPYLQGLKARA---AAGGREVVVCGDWNIAHREADLKNWKSNRKNSGFLPE 184 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFL 270 + + D + + + IDY V Sbjct: 185 EREWLTRVFDEAAYVDVVRALHPEQEGPYSWWSYRGRAFDNDAGWRIDYQVATPGLAGRA 244 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + G+R SDH P+++ Y+ Sbjct: 245 AKAWVE-------RAATHGERWSDHAPVTVTYE 270 >gi|260642545|ref|ZP_05416298.2| endonuclease/Exonuclease/phosphatase family protein [Bacteroides finegoldii DSM 17565] gi|260621683|gb|EEX44554.1| endonuclease/Exonuclease/phosphatase family protein [Bacteroides finegoldii DSM 17565] Length = 336 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 39/315 (12%), Positives = 76/315 (24%), Gaps = 52/315 (16%) Query: 29 WNINTLSEQEGVSLWKN------------SVKRTTSDYTLLRQYAKNL-------DADIV 69 +N+ L + E + ++ + + L I+ Sbjct: 24 YNLENLFDTEDDPNNPGDDEFLPNGPYAWTPEKYQQKLKNMAKVIAKLAREKCPGGPAIL 83 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 + E+ + + + S I H I K +L Sbjct: 84 GVSEIENRRVLEDLVKTEP---LASMGYEIVHYDSPDRRGIDVGCLYNPKLFTLLSSKVY 140 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 S +R + + + G+ ++ H S D + ++ A Sbjct: 141 PFVMP-SQPNFRSRDQLLVSGLLAGESFHMIVNHWPSRYGGDRSSIYREAAAAITKHIAD 199 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-----WKTIDPNDSLIRFPKEKDSR 244 + + +I GD N N + P+ D Sbjct: 200 SIHA-----ADPNAKVLIVGDLNDDPNNKSTKEVLKACRKAADTKPDGYFNATWPLFDRG 254 Query: 245 CNANKNLRNKIPIDYFVMDQNAY-------KFLIQESFSEILYNEDDIKSRGK------- 290 + D ++ N KF E F+ + K +G Sbjct: 255 IGSLCYQDKWNLFDQLIISGNLLGKDRSTLKFWKAEIFNRDFLTTQEGKRKGYPWRTFSS 314 Query: 291 -----RLSDHCPISI 300 SDH P+ I Sbjct: 315 NTFINGYSDHFPVLI 329 >gi|37993813|gb|AAR06984.1| sphingomyelinase [Bacillus cereus] Length = 252 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 82/230 (35%), Gaps = 26/230 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230 Q + ++D+I + + + GD N N +KT+ Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHA 247 >gi|21229250|ref|NP_635172.1| exodeoxyribonuclease III [Methanosarcina mazei Go1] gi|20907825|gb|AAM32844.1| Exodeoxyribonuclease III [Methanosarcina mazei Go1] Length = 258 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 36/306 (11%), Positives = 72/306 (23%), Gaps = 81/306 (26%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83 L+SWN+N L DIV +QE + +V Sbjct: 7 LISWNVNGLRAAVKKGF---------------LDLLLEHRFDIVCVQETKVSQDKLPREV 51 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + +S + + L++ G R Sbjct: 52 KNIQGYYNYFVSAEQNGYSGVGTFSK---------NKPIKLEK-----GMGIEVFDREGR 97 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +L+I+ + D+ K Sbjct: 98 F-----LRTDYEDFVLLNIYFPNG-------KASQERLGYKMAFYDAFLDYANALKSEGK 145 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 VI GD N K + + + + Sbjct: 146 KLVICGDVNTAHKEIDLARPKQNEMISGFLPEERAWMDKFL--AAGYLDSFRMFNPEGGN 203 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +DY + +N + + S SDHCP+ Sbjct: 204 YSWWSMRTGARSRNVGWRLDYVFVSENLRENVKSASI-----------YPEIMGSDHCPV 252 Query: 299 SIDYDF 304 ++ +F Sbjct: 253 GLELEF 258 >gi|130500075|ref|NP_001076209.1| deoxyribonuclease-1 precursor [Oryctolagus cuniculus] gi|6015030|sp|O18998|DNAS1_RABIT RecName: Full=Deoxyribonuclease-1; AltName: Full=Deoxyribonuclease I; Short=DNase I; Flags: Precursor gi|2315143|dbj|BAA21724.1| deoxyribonuclease I [Oryctolagus cuniculus] Length = 281 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 41/287 (14%), Positives = 87/287 (30%), Gaps = 30/287 (10%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78 A +++ ++NI + E + + + + + DI +QE+ + Sbjct: 19 AGSLKIAAFNIRSFGET---------KMSNATLTSYIVRILQRY--DIALIQEVRDSHLT 67 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 AV K+ K + + + R V VL Y G + + Sbjct: 68 AVGKLLDKLNEKAADTYRFVASEPLGRRTYKERYLFVYRPDQVSVLDSYYYDDGCEPCGT 127 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 +R + K+ I D++ + L Q +W Sbjct: 128 DTFSREPAVVRFSSPSTKVREFAIVPLHSAPEDAVAEIDALYDVYLDVQKKW-------- 179 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 L ++ GDFN +Y+ ++ + N + + + N D Sbjct: 180 --GLQDVMLMGDFNADYSYVTSSQWSSIRLRTNPAFKWLIPDTADTTATSTNCAY----D 233 Query: 259 YFVM-DQNAYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302 V+ ++ S + + S + +SDH P+ + Sbjct: 234 RIVVAGPLLQDAVVPNSAAPFNFQAAYGLSNQLAQAISDHYPVEVTL 280 >gi|309811929|ref|ZP_07705701.1| putative exodeoxyribonuclease III [Dermacoccus sp. Ellin185] gi|308434141|gb|EFP58001.1| putative exodeoxyribonuclease III [Dermacoccus sp. Ellin185] Length = 269 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 79/304 (25%), Gaps = 68/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++ N+N + + ++ + D+V +QE+ Sbjct: 1 MRVITANVNGIRAAQRRGG---------------LEWLAQQEPDVVAMQEV------RAS 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + S + +S +A+ K+ S + Sbjct: 40 AKQFATALDGSALAEYELAHAESAAAGREGVAILTKHALASSSSVIDGFDEIGRW----- 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 VE V ++G+ + + +++ + + L + L D Sbjct: 95 --VEADVVVDGRSVTIASVYVHTGEAGTDKQTAKYAFLDALEARMAQLVD---------R 143 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GDFN + + + N + Sbjct: 144 PALVMGDFNVAHTANDLKNWKGNRGKAGFLEDEQAYLTRLTQNGWVDVVRANHGDVPGPY 203 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDY + + +R SDH + Sbjct: 204 SWWSWRGKAFDNDSGWRIDYQFASPALAAVAREPWIG-------RAAAYDQRWSDHAAVV 256 Query: 300 IDYD 303 +DYD Sbjct: 257 VDYD 260 >gi|291394670|ref|XP_002713802.1| PREDICTED: endonuclease/exonuclease/phosphatase family domain containing 1 [Oryctolagus cuniculus] Length = 568 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 38/316 (12%), Positives = 86/316 (27%), Gaps = 41/316 (12%) Query: 10 VFFLVPCTASVAQK------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 + P + A +RL +WN+ S V N R TLL K Sbjct: 240 IISTRPSVEAFAGTRDGRPVLRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK- 294 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD------------SNNDIH 111 ++ +QE+ A+ K + I + + + Sbjct: 295 ----LLAVQELLDKEALEKFCAELNQPILPNIRKWRGPRGCWKAAVAEKPSSLLHKGSGY 350 Query: 112 TAIAVRK-KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 + V + + + ++ ++ + ++++HL + Sbjct: 351 SGFLWDTVAGVELKDVTSQESSPSNGHGKSAGPNPYVARFKVGSNDLTLVNLHLAALTLP 410 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 + +PS + + + +I GDF + + + Sbjct: 411 AVENPSKNPSDGHR---LASFVQSLQETLKGEKDVIILGDFGQGPESSDCD-----VLRR 462 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRG 289 P + + KN + +D + ++ K I Sbjct: 463 EKFHPLVPAHTFTNI-STKNPQGSRSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNW 521 Query: 290 KR---LSDHCPISIDY 302 S+HCP+ ++ Sbjct: 522 SWGGVASEHCPVLAEF 537 >gi|254881020|ref|ZP_05253730.1| metallophosphoesterase [Bacteroides sp. 4_3_47FAA] gi|254833813|gb|EET14122.1| metallophosphoesterase [Bacteroides sp. 4_3_47FAA] Length = 324 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 37/294 (12%), Positives = 75/294 (25%), Gaps = 71/294 (24%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +A +RL+++NI + + V D+ + ++ ++V LQE+ S Sbjct: 93 SAQSQNSLRLMTYNIKNANGMDDVC-----------DFQRIADVINHIHPEVVALQELDS 141 Query: 77 YN-------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 + ++ + +++ + I + K + V ++ Sbjct: 142 MTHRSGQKYVLGEIAGRTQMHAYFAP--------AIDYDGGKYGIGLLTKEIPVSLKTMT 193 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 L G R R + + + Sbjct: 194 LPG------REEARALIMAEFDN-------YIYCCTHLSLTEEDR-------------MA 227 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L+ PF +AGD N + F D + Sbjct: 228 SLELIKDFAAAHKKPFFLAGDLNAEPESAFIKYL----------QQDFQILSDVNQHTFP 277 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY + K S + SDH P+ + + Sbjct: 278 APAPTETIDYITALKQNMKGFTVTSAQVVNEPV---------ASDHRPLVVVLE 322 >gi|238018561|ref|ZP_04598987.1| hypothetical protein VEIDISOL_00388 [Veillonella dispar ATCC 17748] gi|237865032|gb|EEP66322.1| hypothetical protein VEIDISOL_00388 [Veillonella dispar ATCC 17748] Length = 251 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 73/304 (24%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L ++ LDADI LQE Sbjct: 1 MKLISWNVNGLRAAVTKGFMES---------------FNELDADIFCLQETKLQPD-QIS 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++++ + + AV + + + + D R Sbjct: 45 LELPGYEQYWNSAVKKGY----------SGTAVFTRIKPLSVTNGIGIEEHDQEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ +++ + + + L + Sbjct: 91 -----VITAEYDNFYLVCCYTPNSQRELARLEYRMAWEDAFRNYLLEL--------DKKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + F Sbjct: 138 PVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAKMTELLGAGFTDTFRHLYPDAIEEY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ + + + + ++ SDHCP+ Sbjct: 198 SWWSYMGKARERNTGWRIDYFITSKRLDDKIQEAKIHQQIF-----------GSDHCPVE 246 Query: 300 IDYD 303 +D D Sbjct: 247 LDID 250 >gi|167923106|ref|ZP_02510197.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei BCC215] Length = 296 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 75/286 (26%), Gaps = 56/286 (19%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +++R+ ++NI+ T S + L AD++ LQE+ Sbjct: 4 AQPRTRELRIATYNIHG-----------GLGAWTASAAERIAVVLDELCADVIALQEVPL 52 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 A + T AV + + L S Sbjct: 53 GGARGADV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----S 104 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 F R A++ +E + V+ HL S + S Q L + Sbjct: 105 FGNREPRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LA 148 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 +P ++ GD N + F + + F + R Sbjct: 149 AFDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS-- 197 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + ++L+ + DH P+ Sbjct: 198 LDRIWVHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 233 >gi|239832253|ref|ZP_04680582.1| endonuclease/exonuclease/phosphatase [Ochrobactrum intermedium LMG 3301] gi|239824520|gb|EEQ96088.1| endonuclease/exonuclease/phosphatase [Ochrobactrum intermedium LMG 3301] Length = 403 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 47/366 (12%), Positives = 101/366 (27%), Gaps = 86/366 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKN----------------SVKRTTSDYTLLRQY------- 60 + ++N+ L + S ++N + R + Sbjct: 36 FTIATFNVENLMRRFDFSGFRNELHQDRTLQLFEISDEAQYRLLEQARAIAHADDTRQMT 95 Query: 61 ---AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 ADI+ LQE+ + A+ + + R + + I A+ +R Sbjct: 96 ALAIAETRADILCLQEVDNLAALNAFEYGYLFKMIGHGFRHKYLIDGNDSRGIDVAVMMR 155 Query: 118 ------KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKI 157 + SY + D + R R + + + I GK + Sbjct: 156 DTTRDGQPIEVDEVTSYAYVTYNDFGLYEPALGELGLEAHDRIFKRDCLNVDIRIAGKPL 215 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES----LVPFVIAGDFNR 213 + HLKS + + + S + +A+ ++ I K ++I GDFN Sbjct: 216 SLFVTHLKSMTGARNGFDGRTSSLPVRRAEARAIRRIIEDKFGPSNVADRRWLICGDFND 275 Query: 214 ----------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP 256 + + ++ + + Sbjct: 276 YRERIIIGGDEWNGYEFTPMVEEESALDVLLGDGFAVNLVERRPVMDRWTLYHTRGPQER 335 Query: 257 ----IDYFVMDQNAYKFLIQESFSEILY------------NEDDIKSRGK---RLSDHCP 297 +DY + + K + + + D G + SDHCP Sbjct: 336 HLCQLDYIMASPSFAKKNERAVPNIVRRGQPWRTIFPPGQQIDRYPRTGWDRPKASDHCP 395 Query: 298 ISIDYD 303 +++ + Sbjct: 396 VAVTLN 401 >gi|126723112|ref|NP_001075983.1| deoxyribonuclease-1 precursor [Equus caballus] gi|77416419|sp|Q4AEE3|DNAS1_HORSE RecName: Full=Deoxyribonuclease-1; AltName: Full=Deoxyribonuclease I; Short=DNase I; Flags: Precursor gi|73532716|dbj|BAE19916.1| deoxyribonuclease I [Equus caballus] Length = 282 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 87/285 (30%), Gaps = 30/285 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AV 80 +R+ ++NI T E + + Q DI +QE+ + AV Sbjct: 22 SLRIAAFNIRTFGET---------KMSNDTLSNYIVQILNRY--DIALIQEVRDSHLTAV 70 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K+ + + +++ +N R V +L G + + Sbjct: 71 GKLLDRLNQDDPNTYHFVVSEPLGRNNYKERYLFVFRPDQVSLLDSYQYNDGCEPCGNDT 130 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +R + ++ I D+L S L Q +W Sbjct: 131 FSREPAIVKFSSPFTQVKEFAIVPLHAAPSDALAEIDSLYDVYLDVQQKW---------- 180 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 + ++ GDFN +Y+ ++ + N + + + + D Sbjct: 181 DMEDIMLMGDFNAGCSYVTSSQWPSIRLRRNPAFWWLIPDTADTTVKSTHCAY----DRI 236 Query: 261 VMDQNAYKF-LIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302 V+ + ++ +S + + + +SDH P+ + Sbjct: 237 VVAGTLLQEAVVPDSAVPFDFQAAYGLNDQTAEAISDHYPVEVTL 281 >gi|257881925|ref|ZP_05661578.1| AP endonuclease [Enterococcus faecium 1,231,502] gi|257890085|ref|ZP_05669738.1| AP endonuclease [Enterococcus faecium 1,231,410] gi|258615657|ref|ZP_05713427.1| exodeoxyribonuclease [Enterococcus faecium DO] gi|260558703|ref|ZP_05830892.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Enterococcus faecium C68] gi|293563951|ref|ZP_06678361.1| exodeoxyribonuclease III [Enterococcus faecium E1162] gi|294617705|ref|ZP_06697329.1| exodeoxyribonuclease III [Enterococcus faecium E1679] gi|294623736|ref|ZP_06702567.1| exodeoxyribonuclease III [Enterococcus faecium U0317] gi|257817583|gb|EEV44911.1| AP endonuclease [Enterococcus faecium 1,231,502] gi|257826445|gb|EEV53071.1| AP endonuclease [Enterococcus faecium 1,231,410] gi|260075162|gb|EEW63475.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Enterococcus faecium C68] gi|291596042|gb|EFF27311.1| exodeoxyribonuclease III [Enterococcus faecium E1679] gi|291596861|gb|EFF28081.1| exodeoxyribonuclease III [Enterococcus faecium U0317] gi|291604080|gb|EFF33604.1| exodeoxyribonuclease III [Enterococcus faecium E1162] Length = 250 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 75/303 (24%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + + LDAD LQE A Sbjct: 1 MKFISWNVNGLRAIVNKNF---------------LEVFHELDADFFCLQETK-LQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + + D+ R Sbjct: 45 LDLPGYYQYWN----------YAERKGYSGTAIFAKKPALNATYGMGIDIHDTEGRL--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +++ + + + + L + Sbjct: 92 ------ITLEYSDFFLVTCYTPNSQSELKRLDYRLEWEEAFYNYLENL--------KKQK 137 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + N + F ++ Sbjct: 138 PVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERAALSRLLDNGFIDTFRYFYPTQEGVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ ++ L SDHCP+ Sbjct: 198 SWWNYRFNSRKNNAGWRIDYFLTSKDLEPGLADAKIHT-----------DIMGSDHCPVE 246 Query: 300 IDY 302 +D Sbjct: 247 LDL 249 >gi|167587986|ref|ZP_02380374.1| Endonuclease/exonuclease/phosphatase [Burkholderia ubonensis Bu] Length = 253 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 81/280 (28%), Gaps = 56/280 (20%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A+ +R+ ++NI + + LDAD++ LQE+ + Sbjct: 16 ARDLRIATYNIRGGFGI-----------WHAAAADRIAAVIDELDADVIALQEVPLGGSR 64 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + +T + AV + ++ L SF Sbjct: 65 GADV---LAHLRAATGLNAAAGVTIDTTERRYGNAVLSRCPIRASRTLDL-----SFRHR 116 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R A++ ++ I V+ HL S + S+Q Q L + Sbjct: 117 EPRGALDADIDCGAGLIRVVATHLGL-------------SAAERSEQVQRL---LAAFDT 160 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 +P ++ GD N + + + RF + R +D Sbjct: 161 GAMPVILLGDIN---------EWLMRGRALRALVTRFRRAPAPRTFPTLYPLF--ALDRI 209 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ++ +R +R SDH P+ Sbjct: 210 WIHPG----------ELLIDVAVHRSARARRASDHYPLVA 239 >gi|37993807|gb|AAR06980.1| sphingomyelinase [Bacillus cereus] Length = 252 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 84/230 (36%), Gaps = 26/230 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 VSTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSPPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230 Q + ++D+I + + +I GD N N +KT++ Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNA 247 >gi|319902450|ref|YP_004162178.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] gi|319417481|gb|ADV44592.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] Length = 360 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 33/297 (11%), Positives = 81/297 (27%), Gaps = 62/297 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+ + + ++ + D++ QE Sbjct: 104 LKIATYNVQDFGYEVTGYSC-----------KEIARFMEREGVDVLCFQEFDDNED---- 148 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP ++ S I ++R + YPL G + + Sbjct: 149 FPMDSIRRALSHWP---------YALIPNDDSIRGVLPMAVFSRYPLSGHRFITYQGSAN 199 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP---SCSLLSQQAQ------WLKDW 194 ++ + + I +L+ HL++ + A +++ Sbjct: 200 CSMMCDIALGTDTIRLLNNHLQTTSVSQKRRKWEREMKADDTRREVHAAKDAAYTLHENF 259 Query: 195 ITQKKE----------SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + + ++ S P ++ GDFN + + + F Sbjct: 260 VKRTEQTYIISYYAKHSPYPVLVCGDFNSLPSSHTYYH-LREFLKDG-----FRTAGHGY 313 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + + + + IDY D SDH P+ ++ Sbjct: 314 MHTYRYGKGLLRIDYIFHSPTLE-------------GIDYYSPDLDLCSDHNPVIME 357 >gi|241761646|ref|ZP_04759733.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373954|gb|EER63487.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 261 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 86/305 (28%), Gaps = 75/305 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 ++ S+N+N ++ + L ++ + DI+ LQE+ S +A Sbjct: 3 KIASFNVNGIN----------------ARLPRLIEWLEKFQPDILCLQELKSDDA----- 41 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + + +A+ K Q D +R Sbjct: 42 -----RFPQEEIEKTGYYCLYHGQKAYNGVAILSK----EQPKLIRTSLPDDPDPTQSRY 92 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 +E + V ++L + L+S + Y + + + Sbjct: 93 -----IEAAIDNLTVSSLYLPNGNPLNSSKYDYKLA------WFKAFLAHARSLWQQEKS 141 Query: 205 FVIAGDFNRKINYL-----------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++AGD+N ++ ++ +W+ + + + Sbjct: 142 VILAGDYNVVPSFDIKDIRNAAALADNALLAPDSLFYWRQLLAMG-WTDSLRVRHPSEPL 200 Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ + L D ++ SDH P+ Sbjct: 201 YSFWDYQAQSWPRDDGMRIDHILLTPDLADGLTDSGV-------DRQMRGQEKASDHAPV 253 Query: 299 SIDYD 303 I+ D Sbjct: 254 WIEID 258 >gi|228948804|ref|ZP_04111080.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|301056563|ref|YP_003794774.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis CI] gi|228810861|gb|EEM57206.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|300378732|gb|ADK07636.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus biovar anthracis str. CI] Length = 352 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 45/322 (13%), Positives = 108/322 (33%), Gaps = 60/322 (18%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T ++ + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMG----------SYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKK 119 LQE+ + + K P + + + ++ K Sbjct: 110 LQEVDIKSLRSFDVNGHEFLKKGLPNYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTFSK 169 Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176 + + L G + R + R VE + +N GK + ++++HL + Sbjct: 170 YTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---------- 219 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 Y + QQ ++LK ++ + E ++ GD+N+ ++ + +D + P+ + Sbjct: 220 YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPDWLVEL 279 Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280 D + ID F++ N ++ ++ + Sbjct: 280 PKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 337 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 SDH P+S + Sbjct: 338 EN----------SDHNPVSAVF 349 >gi|261366200|ref|ZP_05979083.1| exodeoxyribonuclease III [Subdoligranulum variabile DSM 15176] gi|282572018|gb|EFB77553.1| exodeoxyribonuclease III [Subdoligranulum variabile DSM 15176] Length = 251 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 81/304 (26%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VSWN+N L + + LDAD +QE A Sbjct: 1 MKFVSWNVNGLRACLKKGFE---------------ETFRTLDADFFCIQETKMQPGQADF 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ YS + ++ A+ + + + G ++ R Sbjct: 46 APEGYTEYIYSA-----------DKKGYSGTAIWARTPALSVR----YGLEEDLHNHEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E +++++++ + + + L + Q L ++ Sbjct: 91 ---AITLEYPD--FYLVNLYVPNSQNELARIDYRMQWEDDLRRYLQAL--------DAQK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + F Sbjct: 138 PVILCGDLNVAHTEIDLKNPGPNRGAAGFSDQERGKLDELLAAGFTDTFRHLHPDATGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ + + SDHCP++ Sbjct: 198 SWWSMRFRARERNAGWRIDYFLVSNRLAPQIRKADIL-----------MDILGSDHCPVT 246 Query: 300 IDYD 303 ++ D Sbjct: 247 LELD 250 >gi|224539496|ref|ZP_03680035.1| hypothetical protein BACCELL_04401 [Bacteroides cellulosilyticus DSM 14838] gi|224518891|gb|EEF87996.1| hypothetical protein BACCELL_04401 [Bacteroides cellulosilyticus DSM 14838] Length = 254 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 89/303 (29%), Gaps = 73/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+N L L ++ + AD+V +QE Sbjct: 1 MKIITYNVNGLRAAVSKGLP---------------EWLEQEQADVVCIQETK-------- 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H + ++ +A+ K + G R Sbjct: 38 LQPDQYPEEALSTLGYKHYLYSAQKKGYSGVAILTKKEP----DHVEYGMGIEEYDNEGR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + I V+ ++ S D + + + ++++T+ ++S Sbjct: 94 F-----IRADFGDISVVSVYHPSGTSGDERQ-------AFKMVWLEKFQEYVTELRKSRP 141 Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GD+N + +D W T N I + Sbjct: 142 KLILCGDYNICHEPIDIHDPIRNATNSGFLPEEREWMTRFLNAGFIDTFRLLHPEQQEYT 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY ++ + L + + SDHCP+ + Sbjct: 202 WWSYRFNSRAKNKGWRIDYCMVTEPVRPLLKEARILNDAVH-----------SDHCPMLL 250 Query: 301 DYD 303 D + Sbjct: 251 DIE 253 >gi|153207659|ref|ZP_01946323.1| endonuclease/exonuclease/phosphatase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|212218503|ref|YP_002305290.1| endonuclease/Exonuclease/phosphatase family protein [Coxiella burnetii CbuK_Q154] gi|120576478|gb|EAX33102.1| endonuclease/exonuclease/phosphatase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|212012765|gb|ACJ20145.1| endonuclease/Exonuclease/phosphatase family protein [Coxiella burnetii CbuK_Q154] Length = 255 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 90/294 (30%), Gaps = 51/294 (17%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 ++S+NI+ +R+ + +DADIV LQE+ Sbjct: 3 SLTPKRDAFTVLSYNIHKGFSARYRRFV----------LPDIREALRAIDADIVLLQEVQ 52 Query: 76 SYNAVAKVFPKNTWC------IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 + +++ I S + K H A+ + ++ Sbjct: 53 GKHRKSRLKKFAHADLPQTEFIAESKWPHYMYGKNAVYGSAHHGNALLSNFPFKMVENIN 112 Query: 130 LLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + S S+ +R + +++ ++ V+ IHL F + Q Sbjct: 113 V-----SLSQRASRSILHAIIDYEPTVELHVICIHLGLF-------------RAERDYQL 154 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 L I S P +IAGDFN G + K ++ + + Sbjct: 155 ITLIKRIEAHVPSHAPLIIAGDFNDW--RRGAFNYMEKELELKEVYKVLEGKH---AKTY 209 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + +D L S +S K+LSDH P+ + Sbjct: 210 PASRPTLEVDRIYYRG-----LKLLSGEIFN------ESYWKKLSDHLPLHAKF 252 >gi|163749109|ref|ZP_02156359.1| extracellular nuclease [Shewanella benthica KT99] gi|161331179|gb|EDQ02068.1| extracellular nuclease [Shewanella benthica KT99] Length = 886 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 40/387 (10%), Positives = 102/387 (26%), Gaps = 101/387 (26%) Query: 19 SVAQKVRLVSWNINTLSEQE---GVSLWKNSVKRTTSD------------------YTLL 57 + +R+ S+N+ L + G L + +D T + Sbjct: 459 ATKGDIRVASFNVLNLFTSDSEIGGPLNPTCADQADADASRGCGRGAHTLDEYLLQRTKI 518 Query: 58 RQYAKNLDADIVFLQEMGSY-----NAVAKVFPK--------NTWCIFYSTERLINHSKR 104 ++ADIV L E+ + +++ + + + + + + Sbjct: 519 VNALIEMNADIVGLMEIENNGFSESSSIQYLLNSINAELPAIDAYQFIEAADADKYKGQF 578 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD------------------SFSRAGNRRAV 146 ++ I I R V+ ++ + + R ++ Sbjct: 579 IGSDAIAVGILYRPNKVKPTGDAFIIATPEQHAAEGVATRGEGDDVEISPGYDKYQRHSL 638 Query: 147 ELLVEINGKKIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWI 195 +I+ +K+ ++ HLKS + A+ + + I Sbjct: 639 AQTFQIHDEKLTIVVNHLKSKGSGCLEDWLEFSESKDPADLQGKCNEFRVSAAKVIGEAI 698 Query: 196 TQKKES------------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN------------ 231 + P + D++ + W TI+ Sbjct: 699 KDIEGDILVIGDLNAYGMEDPVRVLTDYDAATSTRDVVTASWTTINGEVYEQEGSVIEKG 758 Query: 232 -DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + + + +D+ + + + L+ I E + Sbjct: 759 FGLINLNTQAHGAETYSYSYGGELGNLDHALGNASVAARLVDIQDWHINSVESSLFEYPN 818 Query: 291 RL-------------SDHCPISIDYDF 304 + SDH P+ + + Sbjct: 819 KYTGDLVKSENVFSSSDHDPVIVALSY 845 >gi|163746515|ref|ZP_02153873.1| metal-dependent hydrolase [Oceanibulbus indolifex HEL-45] gi|161380400|gb|EDQ04811.1| metal-dependent hydrolase [Oceanibulbus indolifex HEL-45] Length = 236 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 80/285 (28%), Gaps = 55/285 (19%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 A Q +R+VS+NI + D + + ++L AD+V LQE Sbjct: 3 PAVAPQSLRIVSYNIRKAMGTDR-----------RRDPERIMRIIRSLHADVVVLQEADR 51 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 A + R + S A+ VR + L G Sbjct: 52 RRAPRPSALPLDRIEKETGLRAVPTPNDVSIGWHGNAVLVRPSAKIDRVEHLTLPG---- 107 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A+ + I +++ V+ HL +Q + + Sbjct: 108 ---VEPRGAMVADLHIGARQLRVIASHLGLLRPS-------------RKEQLSAMIAHLD 151 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 P +IAGD N +G + + + Sbjct: 152 ACAAC--PTLIAGDLNEWSQKVGLGRLAKRF------------TIHAPGKSYHARMPVAH 197 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 +D +DQ+ + +R SDH PI +D Sbjct: 198 LDRIALDQHLTVLQGGV----------VETPQTRRASDHLPIWLD 232 >gi|145594579|ref|YP_001158876.1| sphingomyelin phosphodiesterase [Salinispora tropica CNB-440] gi|145303916|gb|ABP54498.1| Sphingomyelin phosphodiesterase [Salinispora tropica CNB-440] Length = 318 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 104/338 (30%), Gaps = 56/338 (16%) Query: 1 MIRKYVLALVFFLVPC--------TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS 52 M R L L L A+ +++++ N+ L SL+ N + T + Sbjct: 1 MKRPQTLLLAVVLTATGLLAPAAPAAAAPVPLKVLTHNVMFLP----QSLFPNWGQVTRA 56 Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 + Y DIV LQE+ A ++ + Y T L Sbjct: 57 NLISEADYIAGQ--DIVVLQELFDNEASDRLKDQLAAQYPYQTPVLGRSKSGWDATLGSY 114 Query: 113 --------AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164 + + + + + Y + + N+ V ++IN + V+ H Sbjct: 115 SHATPEDGGVTILSRWPILEKVQYVYADGCGADWFS-NKGFVYAQLDINNTPVHVVGTHA 173 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDD 223 ++ + + + Q L ++ ++ + ++AGD N + Sbjct: 174 QAADTGCADGT----GARVRAAQFDELDAFLDARQIPTDEQVIVAGDLNVDRYSTEYDSM 229 Query: 224 FWKTIDPNDSLIRFPKEKDSRCN----ANKNLRNKIPIDYFVMDQNAY------------ 267 + + + P D++ N N + ++ +DY + Sbjct: 230 LTRLDVSDATFTGHPYSWDAQRNDMADYNDDQDSRQQLDYVLQRNGHARHGSGDNETLAV 289 Query: 268 ---KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + F Y + DH P++ + Sbjct: 290 EAPQWCVTSWFVRYCYTDYA---------DHYPVAANI 318 >gi|91789279|ref|YP_550231.1| exodeoxyribonuclease III [Polaromonas sp. JS666] gi|91698504|gb|ABE45333.1| Exodeoxyribonuclease III [Polaromonas sp. JS666] Length = 272 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 80/304 (26%), Gaps = 74/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L ++N+N + L + D+V LQE+ A+ V Sbjct: 1 MKLATFNVNG----------------IKTRLPNLLSWLAKESPDLVCLQEL---KALDGV 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAG 141 FP+ + R + +A+ + + +++ P D Sbjct: 42 FPQ-------AELREAGYGAVWKGQRSWNGVAILAKDSDPVEIRRELPGDPGDDQSRY-- 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E V I V ++L + + Y + + L +S Sbjct: 93 ----LEATVN----GIIVACLYLPNGNPQPGPKFDYKLA------WFERLNRHAQALYQS 138 Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246 P +AGDFN + + + + Sbjct: 139 GQPVALAGDFNVVPTDFDIYNPKSWLKDALLQPESREAYARLLSQGWVDSLRHLHPDERI 198 Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ +++ L D + SDH P Sbjct: 199 YTFWDYFRQHWQKNSGLRIDHILLNAELAPGLKAAGV-------DTWVRDEEHASDHAPT 251 Query: 299 SIDY 302 ++ Sbjct: 252 WVEL 255 >gi|77461257|ref|YP_350764.1| aminoacyl-tRNA hydrolase [Pseudomonas fluorescens Pf0-1] gi|77385260|gb|ABA76773.1| Endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens Pf0-1] Length = 265 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 40/279 (14%), Positives = 80/279 (28%), Gaps = 40/279 (14%) Query: 31 INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVAKVFPKNT 88 + + + + LR+ +++ AD+VFLQE+ + + T Sbjct: 20 VRRFTVLTVNTHKGFTALNRRFILPELREAVRSVSADVVFLQEVHGTHEHHPKRYNNWPT 79 Query: 89 WCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + S + + + AV K V + + + NR Sbjct: 80 MPQYEFLADSLWPQFAYGRNAVYPEGDHGNAVLSKFQIVRHDNLDVSISGH-----ENRG 134 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + ++ + G V I + S + Q LK + + P Sbjct: 135 LLHCVLRLPGDDREVHAICVHLGLR-----------ESHRNAQLALLKKRLAE-LPEDAP 182 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 ++AGDFN ++P F + + +D + Sbjct: 183 VIVAGDFNDWRQRAD------ALLEPCGLREVFAAHHGRSARSFPARLPLLRLDRIYVSN 236 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 L + LSDH P+S++ + Sbjct: 237 -----LKASQPKVL------ANRPWSHLSDHAPLSVEIE 264 >gi|301165090|emb|CBW24658.1| conserved hypothetical protein [Bacteroides fragilis 638R] Length = 608 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 89/305 (29%), Gaps = 67/305 (21%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +RK +L L L +A +RL+++N+ + +G+ +Y + Sbjct: 1 MRKLLLLLFSALFVLSAQAEDVLRLMTYNVRNANGMDGIC-----------NYQRVANVI 49 Query: 62 KNLDADIVFLQEMGSYNAVA---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N DIV +QE+ S A + V + + I + Sbjct: 50 NNARPDIVAIQELDSMTARSNRTDVLKELAERTQLHPCFAPAID----YDGGKYGIGILS 105 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K + Q++ L G R R + + HL Sbjct: 106 KETPLRVQTFALPG------REEARTLLVAEFP----EYVFACTHLSLTEED-------- 147 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--FWKTIDPNDSLIR 236 + + L+ + ++ PF +AGDFN + D ++ + Sbjct: 148 --------RMKSLEILKSVTADTRKPFFLAGDFNSDADSGFIKDLKSTFQILS------- 192 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 K +DY + + + S I SDH Sbjct: 193 ---NPKQPTYPAS--EPKETLDYLIALKQETPTFVVNSARVI---------DEPLASDHR 238 Query: 297 PISID 301 P+ ++ Sbjct: 239 PLLVE 243 >gi|126730406|ref|ZP_01746217.1| exodeoxyribonuclease III, putative [Sagittula stellata E-37] gi|126709139|gb|EBA08194.1| exodeoxyribonuclease III, putative [Sagittula stellata E-37] Length = 262 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 29/308 (9%), Positives = 72/308 (23%), Gaps = 75/308 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAV 80 L +WNIN L+ + + D++ LQE S Sbjct: 2 SFTLATWNIN----------------SVRLRKALVSKLMQEEAPDVLCLQECKSPVEKIP 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +VF + + + +A+ + + Sbjct: 46 HEVFAELGYRYM-----------VGRGQKGYNGVAILSRLPLEDVGDKDFAALGHARH-- 92 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 V +E + + + ++ + D + + ++DW ++ Sbjct: 93 -----VAARLENG---VTIHNFYVPAG--GDEPDREKNIKFGQKLDYLTEMRDWFHTERP 142 Query: 201 SLVPFVIAGDFNRKINYLG--NNDDFWKTID-------------PNDSLIRFPKEKDSRC 245 ++ GD N ++ K + + ++ Sbjct: 143 ERA--ILVGDLNIAPREDDVWDHKKLLKIVSHTPIEVEHLGAAQDAGGWVDITRKDIPDG 200 Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ + ++ SDH Sbjct: 201 RLFSWWSYRAKDWDAADKGRRLDHIWATPDIADAGHSS-------RILRAARGWEQPSDH 253 Query: 296 CPISIDYD 303 P+ +D Sbjct: 254 APVFATFD 261 >gi|226361308|ref|YP_002779086.1| exodeoxyribonuclease III [Rhodococcus opacus B4] gi|226239793|dbj|BAH50141.1| putative exodeoxyribonuclease III [Rhodococcus opacus B4] Length = 267 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 75/305 (24%), Gaps = 66/305 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + + + D D++ +QE + Sbjct: 1 MRIATWNVN----------------SVRARTDRILDWLQRSDVDVLAIQETKCKDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y R + + +A+ + + G Sbjct: 41 ------QFPYERFRELGYEVAHVGLSQWNGVAIASRVG-LDDVQIGFEGQPGFHKDPEVA 93 Query: 144 RAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKES 201 A E + + V +++ + L TY L A+ D + + Sbjct: 94 PAQEARAIGATCNGVRVWSLYVPNGRELADPHYTYK-----LEWLAKLHTDAVGWLDRNP 148 Query: 202 LVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + GD+N + ++ + Sbjct: 149 DAQIALVGDWNVAPTDEDVWDPALFEGKTHTSVPEREAFQAFVESGFADVVRPHTPGP-G 207 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 ID+ + + + D + +GK SDH P Sbjct: 208 VYTYWDYTQLRFPKKQGMRIDFVLGSPALAGRVDKAEI-------DRNERKGKGASDHAP 260 Query: 298 ISIDY 302 + +D Sbjct: 261 VIVDL 265 >gi|254500886|ref|ZP_05113037.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii DFL-11] gi|222436957|gb|EEE43636.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii DFL-11] Length = 1702 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 42/359 (11%), Positives = 86/359 (23%), Gaps = 72/359 (20%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD 65 V +++ S+N+ + + S + +D Sbjct: 1334 VPDVGGSLKVGSFNLLNFFTTLDQTGNTSGPSGLDPRGAESAAEFERQVDKMIAALAEMD 1393 Query: 66 ADIVFLQEMGSYN---------AVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIA 115 ADI+ LQE+ + A+ + + + D+++ I + Sbjct: 1394 ADIIGLQELENEYGDQNGDGQFALQYLVNALNEATGRNYTFVDPGVNYGDTSDAIMVGMI 1453 Query: 116 VRKKNVRVLQQS-------------------YPLLGAKDSFSRAGNRRAVELLVE--ING 154 V + + G +R + + G Sbjct: 1454 YDADAVEIADGTSVARLTDADLAGLENLTDLNVDPGHAVFDGAGTSRAPLAVTFTELETG 1513 Query: 155 KKIWVLDIHLKSFCFLDSLENTY------SPSCSLLSQQAQWLKDWITQKK--ESLVPFV 206 I V H KS + N + Q A+ L W+ + Sbjct: 1514 GDITVAVNHFKSKGSVSPFGNNEGIGDGTGNNNEARLQAAEALDAWLATNPTGSDDTDIL 1573 Query: 207 IAGDFNRKINYLGNNDDFWK-----TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 I GD N + + + + ++++ +D+ + Sbjct: 1574 ILGDLNSYLMEDPIQYLLSQDDGLIDFNLLGGDNQTSFGFPVDLGTAPSVQSFGALDFAL 1633 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRG-----------------KRLSDHCPISIDYD 303 + + I E R SDH P+ I D Sbjct: 1634 ASNSLLDQVTGAEEWNINAFEASALDYNTNFKPDSQISDLYAADQYRASDHNPMLIGLD 1692 >gi|325261710|ref|ZP_08128448.1| exodeoxyribonuclease III [Clostridium sp. D5] gi|324033164|gb|EGB94441.1| exodeoxyribonuclease III [Clostridium sp. D5] Length = 250 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 76/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N + ++ DADI +QE Sbjct: 1 MKFISWNVNGIRACVQKGF---------------LEFFSQADADIFCIQETKMQEG-QLS 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ AV K + + D R Sbjct: 45 LELEGYHQYWN----------YAVKKGYSGTAVFSKIEPLSVVYGIGIEEHDQEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + + + ++ + + + + L++ Sbjct: 91 -----VITLEYEDFYFVTVYTPNAQNELARLDYRMKWEDDFRAWLKKLEE--------NK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + + F + Sbjct: 138 PVVVTGDMNVAHKEIDLKNPKTNRKSAGFSDEERQKFTELLDAGFIDTFRYFYPDQEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + L+ SDHCP+ Sbjct: 198 SWWSYRFRAREKNAGWRIDYFCVSECLKDRLVDAGILT-----------DIMGSDHCPVV 246 Query: 300 IDYD 303 ++ + Sbjct: 247 LEMN 250 >gi|229496874|ref|ZP_04390582.1| endonuclease/Exonuclease/phosphatase family protein [Porphyromonas endodontalis ATCC 35406] gi|229316192|gb|EEN82117.1| endonuclease/Exonuclease/phosphatase family protein [Porphyromonas endodontalis ATCC 35406] Length = 343 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 46/352 (13%), Positives = 88/352 (25%), Gaps = 59/352 (16%) Query: 1 MIRKYVLALVFFLVPCTASV---AQKVRLVSWNINTLSEQE----------GVSLWKNSV 47 M R ++ CT S A ++ + +N+ L + + + Sbjct: 1 MNRSIYFFILLIFSVCTLSAQKVAHRIPIAFYNVENLFDCNDDANDDAEFLPDGKREWTE 60 Query: 48 KRTTSDYTLLRQYAKNLDAD----IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103 +R L ++ AD +V L E+ + + + + + I H Sbjct: 61 ERYQQKLNNLAHVLGDI-ADKGGAVVGLAEVENRHVLENLVRNPS---IRKRNYSIIHYD 116 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 I A+ K + + + S+ R + I+ + + H Sbjct: 117 SPDPRGIDCALLYDAKIFHLKSSGVRFIALPEE-SKIPTRDILFATGTIDNELFHFIVGH 175 Query: 164 LKSFCFLD-SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 S D + + + Q A L + ++ GDFN + Sbjct: 176 WPSRYGGDPASAGRRMVAAQTMRQVADSLLR-----EYPGSKAILMGDFNDDPFDASVVE 230 Query: 223 DFW--KTIDPNDSLIRFPK---EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE---- 273 +TID + F D V+ N K Q Sbjct: 231 GLNLCQTIDETHATDLFSPMLSMYRQGAGTLAYKGKWNLFDIMVVSGNLLKKNTQGLHLY 290 Query: 274 ----------------------SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + SDH P+ + Sbjct: 291 QDPESHQLAYIFRRDYLLRQTPKHRGEPLRTFSGNNYLGGYSDHLPVYLYLT 342 >gi|171915906|ref|ZP_02931376.1| exodeoxyribonuclease III [Verrucomicrobium spinosum DSM 4136] Length = 250 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 40/300 (13%), Positives = 82/300 (27%), Gaps = 76/300 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N + LR+Y DAD++ LQE+ + A + Sbjct: 1 MKLVSWNVNGIRACMDKG---------------LREYLTACDADVICLQEVKAMEEQAGL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ + + + A+ + +G R Sbjct: 46 EWFKDYQVVWNAAQKKGY----------SGTAILTRQPI----KSHAIGMGIDEHDKEGR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V++++ + + + L+ Sbjct: 92 -----VITVEFPDYYVVNVYTPNAQAELARLPYRLLWDDAFRLYLKNLEQ--------TK 138 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249 P + GD N N + P + + DSR + Sbjct: 139 PVLACGDLNVAHNEIDIARPKENRFSPGFSDQERASFGKLLESGFVDTFRHFDSRPHQYS 198 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY++ Q L SDHCP+ + Sbjct: 199 WWSYRANARGNNVGWRIDYWLASQGLKDGLKSSIIR-----------PDIHGSDHCPVEL 247 >gi|149706121|ref|XP_001501241.1| PREDICTED: similar to endonuclease/exonuclease/phosphatase family domain containing 1 [Equus caballus] Length = 569 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 36/296 (12%), Positives = 82/296 (27%), Gaps = 35/296 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+ S V N R TLL K ++ +QE+ A+ K Sbjct: 261 LRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 311 Query: 84 FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKKNVRVLQQSYPLL 131 + I + + + L+ + Sbjct: 312 CTELNQPILPNIRKWKGPRGCWKAVVAETPSAQLQKGAGFSGFLWDAAAGVELRDAASQE 371 Query: 132 GAKDSFSRAGN-RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + + R + ++ + ++++HL + + + S S Sbjct: 372 SSPGNGHRKPSGPSPYLARFKVGSNDLTLVNLHLATLTLPGGENPSKNHSDSHR---VAS 428 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + + + ++ GDF + + + I + + KN Sbjct: 429 FAQTLQETLKGEKDVIVLGDFGQGPDSSDYD------ILRKEKFHHLIPAHTFTNISTKN 482 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302 + +D + ++ K I S+HCP+ ++ Sbjct: 483 PQGSRSLDNIWISRSLKKIFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEF 538 >gi|77735773|ref|NP_001029581.1| endonuclease/exonuclease/phosphatase family domain-containing protein 1 [Bos taurus] gi|122145064|sp|Q3MHJ7|EEPD1_BOVIN RecName: Full=Endonuclease/exonuclease/phosphatase family domain-containing protein 1 gi|75948260|gb|AAI05213.1| Endonuclease/exonuclease/phosphatase family domain containing 1 [Bos taurus] gi|296488465|gb|DAA30578.1| endonuclease/exonuclease/phosphatase family domain-containing protein 1 [Bos taurus] Length = 571 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 35/296 (11%), Positives = 80/296 (27%), Gaps = 35/296 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+ S V N R TLL K ++ +QE+ A+ K Sbjct: 263 LRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 313 Query: 84 FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKK-NVRVLQQSYPL 130 + I + + V + ++ Sbjct: 314 CVELNQPILPNIRKWKGPRGCWKAVVSETPSTQLQKGAGFAGFLWDTAAGVELRDAAWQE 373 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + + ++ + ++++HL + + + S S Sbjct: 374 SSPGNGHGKPVGPSPYLARFKVGSHDLTLVNLHLATLTLPGGENLSKNHSDSHRW---AS 430 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + + + ++ GDF + + + I + + KN Sbjct: 431 FTQTLQETLKGEKDVIVLGDFGQGPDSSDYD------ILRKEKFHHLIPAHTFTNISTKN 484 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302 + +D + ++ K I S+HCP+ ++ Sbjct: 485 PQGSKALDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEF 540 >gi|37993834|gb|AAR06998.1| sphingomyelinase [Bacillus thuringiensis] Length = 252 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 83/230 (36%), Gaps = 26/230 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230 Q + ++D+I + + +I GD N +KT++ Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNA 247 >gi|319638482|ref|ZP_07993244.1| endonuclease/exonuclease/phosphatase [Neisseria mucosa C102] gi|317400231|gb|EFV80890.1| endonuclease/exonuclease/phosphatase [Neisseria mucosa C102] Length = 261 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 91/287 (31%), Gaps = 47/287 (16%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---- 75 + V + S+N++ S + L +D++FLQE+ Sbjct: 2 SPRPVTITSYNMH----------KGMSALNRKVQVNRMADALGALGSDVLFLQEVQGQHL 51 Query: 76 SYNAVAKVFPKNTWCIFY-STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + I S + ++ K H A+ + + + + Sbjct: 52 NRSRRTDFPDAPHYDIIGDSLDYHRSYGKNAVYPKRHHGNAILSRLPLKTENNLNI---- 107 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 S ++ R + V G + ++ + + +Q + + D+ Sbjct: 108 -SVNKLEQRGLLHCEVVPEGWEDPLVCLCVHLNLREPD-----------RLKQYRAISDY 155 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + P +IAGDFN + + + +D N+ F R + Sbjct: 156 VDRHINPDSPLIIAGDFNDW--RQKSARELGRALDLNE---VFVDNTGKRPKTFPSRLPI 210 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + +D +++ +E + LSDH P+S+ Sbjct: 211 LSLDRIYTRN-----------LDVIDSEIHNSKDWQHLSDHLPLSVT 246 >gi|262170443|ref|ZP_06038121.1| extracellular nuclease-related protein [Vibrio mimicus MB-451] gi|261891519|gb|EEY37505.1| extracellular nuclease-related protein [Vibrio mimicus MB-451] Length = 867 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 50/373 (13%), Positives = 96/373 (25%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R S+ + LDADIV L E Sbjct: 471 GDLRIATFNVLNYFNSPFGGDANQHGGNRGASNLVEFEVQQAKIVNAIVRLDADIVGLME 530 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116 + + S R D I T + Sbjct: 531 IENNGFGEGSAIAQLVNQLNSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 590 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162 R K V++ Q + ++ + R + ++ G KI V Sbjct: 591 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 650 Query: 163 HLKS--------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL------ 202 HLKS + + A L D +++ Sbjct: 651 HLKSKGSACWEDAAPVEQGGQGGQDLDYQGACENFRVAAAVALGDALSKIDGHKVILGDM 710 Query: 203 ------VPFVIAGDF-------------NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 P ++ D+ N I + D I + + K Sbjct: 711 NSYGMEDPMLVLTDYTPEKYGKPIRAARNTYIAGVEQFGDAGAEIKHSYGYLNAVAMKHP 770 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290 + +D+ ++ + ++ + I E + Sbjct: 771 DSWSYSFNDEVGALDHLLVSPSLKTKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 830 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 831 RASDHDPAVLELN 843 >gi|217425444|ref|ZP_03456938.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 576] gi|254265260|ref|ZP_04956125.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1710a] gi|217391695|gb|EEC31723.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 576] gi|254216262|gb|EET05647.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1710a] Length = 338 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 75/285 (26%), Gaps = 56/285 (19%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 +++R+ ++NI+ T S + L AD++ LQE+ Sbjct: 47 QPRTRELRIATYNIHG-----------GLGAWTASAAERIAVVLDELCADVIALQEVPLG 95 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A + T AV + + L SF Sbjct: 96 GARGADV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----SF 147 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R A++ +E + V+ HL S + S Q L + Sbjct: 148 GNREPRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LAA 191 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 +P ++ GD N + F + + F + R + Sbjct: 192 FDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS--L 240 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D + ++L+ + DH P+ Sbjct: 241 DRIWVHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 275 >gi|126457011|ref|YP_001075914.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106a] gi|242313530|ref|ZP_04812547.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106b] gi|254194220|ref|ZP_04900652.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei S13] gi|126230779|gb|ABN94192.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106a] gi|169650971|gb|EDS83664.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei S13] gi|242136769|gb|EES23172.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106b] Length = 338 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 75/285 (26%), Gaps = 56/285 (19%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 +++R+ ++NI+ T S + L AD++ LQE+ Sbjct: 47 QPRTRELRIATYNIHG-----------GLGAWTASAAERIAVVLDELCADVIALQEVPLG 95 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A + T AV + + L SF Sbjct: 96 GARGADV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----SF 147 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R A++ +E + V+ HL S + S Q L + Sbjct: 148 GNREPRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LAA 191 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 +P ++ GD N + F + + F + R + Sbjct: 192 FDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS--L 240 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D + ++L+ + DH P+ Sbjct: 241 DRIWVHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 275 >gi|315147719|gb|EFT91735.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX4244] Length = 254 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 85/286 (29%), Gaps = 46/286 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+ V + + + + Q D + +QE+ Sbjct: 1 MKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138 Y+T ++ + AI ++ V+ + Y L Sbjct: 54 A--------YTTFTCLSAEREGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHPE 105 Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A+ L + V+++HL + + ++ + L D I Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-PKEKDSRCNANKNLRNKI 255 Q P ++ GDFN ++ + K D + + P+ K Sbjct: 158 QY-----PTLLMGDFNAELGEAVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAELE 212 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + + + G+ SDH P+ + Sbjct: 213 EIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248 >gi|312129153|ref|YP_003996493.1| endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] gi|311905699|gb|ADQ16140.1| Endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] Length = 293 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 94/312 (30%), Gaps = 43/312 (13%) Query: 1 MIRKYVLALVFFLVPCTA---SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 M R+ + L +P + V+ R+++ NI + + +S + Sbjct: 1 MKRRNFIQLSVGALPLLSFKFPVSAGHRIMTCNIR-----VALDEDEEKGVGWSSRKKIC 55 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 DI+ LQE+ A + + + ++ + + I Sbjct: 56 LDIISKYKPDIICLQEVLKGQAADFKKHFSGYQLLGFDGPEMDANPVGYHGIAKNPILYS 115 Query: 118 KKNVRVLQ------QSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCF 169 K ++ PL+ S+ A R A + ++ GK+ V+++HL Sbjct: 116 TKKYELISAGTYWLSETPLVAGSKSWDTARARHANWIRLKDKSTGKEFRVINLHLDHVSN 175 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 Q + + + Q + P ++ GDFN + + Sbjct: 176 D------------AKFHQLKMVIEEAGQYLPA-FPQILCGDFNSRFQSKVFSTPRNAGWK 222 Query: 230 PNDSLIRFPKEKDSRCNANKNLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 ++ KE +A K L+ ID+ + Sbjct: 223 EGMEILYGEKEMGFTGHAFKGLQYEKGPSGGRIDFIWYKGD---------IEVKRAEILR 273 Query: 285 IKSRGKRLSDHC 296 + +G SDH Sbjct: 274 DEVKGVYPSDHF 285 >gi|288799645|ref|ZP_06405104.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 299 str. F0039] gi|288332893|gb|EFC71372.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 299 str. F0039] Length = 250 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 81/305 (26%), Gaps = 79/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L K LDAD LQE A Sbjct: 1 MKFISWNVNGLRASVTKGFE---------------DIFKTLDADFFCLQETK-MQAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ ++ ++ A+ K+ + Q + D R Sbjct: 45 LQFEGYESYWN----------YADKKGYSGTAIYTKHSPLSVQYGIGIDQHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + ++ +++ ++ + + L ++ Sbjct: 91 -----VVTLEFEQFYLVTVYTPNSQDELKRLDYRMEWERDFQAYLVKL--------DASK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + N + F Sbjct: 138 PVVVCGDMNVAHQEIDLKNPKTNRRNAGFTDEEREKMTNLLDNGFIDTFRYLYPEEV-TY 196 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ + L ++ SDHCP+ Sbjct: 197 SWWSYRFKAREKNTGWRIDYFLISERLKSNLTDAKIHTDIF-----------GSDHCPVE 245 Query: 300 IDYDF 304 +D F Sbjct: 246 LDLTF 250 >gi|255036745|ref|YP_003087366.1| exodeoxyribonuclease III Xth [Dyadobacter fermentans DSM 18053] gi|254949501|gb|ACT94201.1| exodeoxyribonuclease III Xth [Dyadobacter fermentans DSM 18053] Length = 254 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 33/300 (11%), Positives = 78/300 (26%), Gaps = 72/300 (24%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 ++++N+N + L + + ADI+ QE+ + V + Sbjct: 3 ILTYNLNGIRAALKNG---------------LLDWLQTTPADILCFQEVKATPDVVDLSG 47 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + ++ +A+ K + A D+ R Sbjct: 48 FRALGYELAGW-------HAAEKKGYSGVAIFSKIQPDRVVMGCDIPAYDAEGR------ 94 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++ + + VL+ + S D ++ + L+ Sbjct: 95 ---VLRADFGDLTVLNCYFPSGTSGDVRQSVKMRFLTDFLVWVNELRK-------ERPNL 144 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANKNL 251 +I GD+N + +D + + + Sbjct: 145 IICGDYNIAHTEIDIHDPVRNQKSSGFLPEERAWMTEWFSNGYTDAFRFMNPTLRQYSWW 204 Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + IDY + + +I + SDHCP+ ++ Sbjct: 205 TYRAGARGNNKGWRIDYISVSEPLKFRIIAS-----------RQYNDAVHSDHCPVWLEI 253 >gi|29828020|ref|NP_822654.1| hypothetical protein SAV_1479 [Streptomyces avermitilis MA-4680] gi|29605122|dbj|BAC69189.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 303 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 29/287 (10%), Positives = 68/287 (23%), Gaps = 35/287 (12%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +++ ++++N+ S E ++R+ + ++ QE Sbjct: 44 GRRLDVMTFNLRFASASE--------PHSWAVRRPVMRELLRRERPHVIGTQEGLYQQVR 95 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + T R T + P + +++ Sbjct: 96 DIEADLGPHYDWIGTGRAGGSRDEFMAVFYDTRRLAPLEYDHFWLSDTPDVIGSNTWGGG 155 Query: 141 GNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R + + L+ HL + + + Sbjct: 156 SIRMVTRVRFRDLADGDRPFHFLNTHLDNASQYARARAAALIADRI-------------A 202 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--RNKI 255 + P V+ GDFN + + + + K + Sbjct: 203 GLDRSQPLVVTGDFNAAAHKNAVYETMLGAGLVDTWDTAAERGKLYGTFHGYKPLVPDGD 262 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ + + + S G+ SDH P+ Sbjct: 263 RIDWILASPGVAA---------HCASINAFSSNGQFPSDHLPVQASL 300 >gi|42523806|ref|NP_969186.1| hypothetical protein Bd2360 [Bdellovibrio bacteriovorus HD100] gi|39576013|emb|CAE80179.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100] Length = 395 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 100/347 (28%), Gaps = 71/347 (20%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKN---------------------------- 45 A +V ++S+N+ L + + Sbjct: 31 FSLPPKAADEVSVMSFNVENLFDTTHDENRNDYTYMPLAVKQKDPKIVQACKDTNDSSYR 90 Query: 46 ---------SVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYNAVAKVFPKNTWCI-F 92 S ++ L + +D D++ L E+ + N + K + Sbjct: 91 VSECLSTDWSEEQLDKKLQNLSKVVLGVDGNGPDVLMLIEVENENVLNIWNKKYLQKAGY 150 Query: 93 YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE- 151 + + KR + + + + V K + + +D +R +E+ ++ Sbjct: 151 STVVLIEGPDKRGIDLGLMSRLPVVGK-PVLHPIPWKPKNDEDKKWMEASRGVLEVTLKA 209 Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211 NG I L H S + + QQA + + K + GD Sbjct: 210 PNGDPITFLTAHFPS-----------QANPTYWRQQAAEFVAKLIKDKGPDTMVIAGGDL 258 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK--- 268 N + F T P + F K+ + ++ +D + + + Sbjct: 259 NITHEEESKENIFRDTFSPVGDVSHFVGCKECP-GTHNYRKSWSFLDAHIYSKALLEKGS 317 Query: 269 ---FLIQESFSEILYNEDDIKSRGK----------RLSDHCPISIDY 302 + + I Y+E +K ++DH P+ + Sbjct: 318 GSYKMEPGTIDVIRYDEVHLKKGKYPLRWDYDRQIGVADHFPLYVRL 364 >gi|42523979|ref|NP_969359.1| hypothetical protein Bd2555 [Bdellovibrio bacteriovorus HD100] gi|39576187|emb|CAE80352.1| hypothetical protein Bd2555 [Bdellovibrio bacteriovorus HD100] Length = 343 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 106/343 (30%), Gaps = 71/343 (20%) Query: 27 VSW-----------NINTLSEQEGVSLWKNSVKRTTSDYTL----------------LRQ 59 ++W N L K ++ + + + + Sbjct: 1 MTWTETTNLKFCLLNAENLFLMFDGIPSKEALNLKEAHWQRLSTSVYENKPLKKTQDIAK 60 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 K ++ADI+ L E+G ++ N +F + +S +I +RK Sbjct: 61 ALKEINADIIMLCEVGGLESL-----NNFNLLFMDEAYSPCLIEGNSERNIDVGFLIRKG 115 Query: 120 NVRV---------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 L YP+ G K + S +R VEL + + + Sbjct: 116 LPFYFDLQSNKHRLINYLYPHERDSLAHGYPVKGGKITTSHKFSRDVVELKLFKSDRDKP 175 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKIN 216 + I L E + + L + + +++ P ++AGDFN Sbjct: 176 FMIILLTHLKSRLDPERIDPNGFERRQAELRTLIEIYQELEKTHPQVPVMVAGDFNGNAG 235 Query: 217 YLGNNDDF-----WKTIDPNDSLIRFPKEKDSRCNA--NKNLRNKIPIDYFVMDQNAYKF 269 G +++F ++ + + E+ + N + + ID+ + + + Sbjct: 236 LTGTDEEFKDIYNLTSLRDVLEVAQLEIEERATFYQVRNSSRADGRQIDFVFIPPLLHPY 295 Query: 270 LIQESFSEILYNEDDIKSRG---------KRLSDHCPISIDYD 303 L S Y ++ + SDH P+ + + Sbjct: 296 LKPASAHVHRYKDEFGMAHDIPRNMDAKLSLPSDHYPLVFEIE 338 >gi|319780945|ref|YP_004140421.1| endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166833|gb|ADV10371.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 289 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 89/312 (28%), Gaps = 57/312 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78 ++LV++NI +G D + + AD++ LQE+ N Sbjct: 1 MKLVTYNIQYGIGLDG-----------QYDVGRIADAVR--GADVIALQEVTRNNPRNGG 47 Query: 79 ---AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPL 130 + Y + N N T V + L ++ L Sbjct: 48 RDMVAEIGEALPDYFAVYGSNFEANIGSHIDNGRAVTKTFQLGNMVLSRTPIHLSRNLLL 107 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 ++ R A+E L+E I IHL L+ +L+ + Sbjct: 108 PRSRSFEMMNFQRGALEALIETPLGFIRFYSIHLDHRSPLERASQIQFLRQRMLNYALEG 167 Query: 191 -----LKDWITQKKESLVPFVIAGDFNRKINYLG-------NNDDFWKTIDPNDSLIRFP 238 + + + FV GDFN + +F + + ++ Sbjct: 168 GALSGVAEIGLPELPHPEAFVGMGDFNMLAGSPEYVELAGRPDHEFGMPLTADFAVDAAL 227 Query: 239 KEKDSRCNANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + + + K IDY + + L + R Sbjct: 228 RLNATGDDLISWVDPKQPTDPSRHKRIDYIFTSASLARSLQRLWV-----------DRKA 276 Query: 291 RLSDHCPISIDY 302 SDH P+ ++ Sbjct: 277 VGSDHLPVWVEL 288 >gi|281425366|ref|ZP_06256279.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella oris F0302] gi|281400529|gb|EFB31360.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella oris F0302] Length = 347 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 39/351 (11%), Positives = 97/351 (27%), Gaps = 63/351 (17%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRL---VSWNINTLSEQEGVSLWKN-----------SV 47 ++K V LV V S +K + +N L + + ++ Sbjct: 1 MKKQVFLLVALFVCLATSAQKKFSVYAVGFYNQENLFDTCHDAGKRDYDFLPTGSYRWDG 60 Query: 48 KRTTSDYTLLRQYAKNLDADI--------VFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99 + + + + ++ D+ + L E+ + + + + + Sbjct: 61 LKYSHKLHNMARALADMGTDVLPNVGCAVIGLSEVENRKTLEDLTAQPELK---ARNYQF 117 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 H + I A+ + ++ P + + + R + + ++ + + Sbjct: 118 AHIEGPDKRGIDCALIYNPSLFTMESETLVPYRNSTEQDTSFVTRGFLTVTGKLANEPVA 177 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 + HL S S + QA+ +KD + + + GD N Sbjct: 178 FIVCHLPSRFSGPSYREWGAL-------QAKAVKDSL-LVLNPQMKVFVMGDMNDDPTDK 229 Query: 219 GNNDDFWKTID------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 + + + + K D VM N + Sbjct: 230 SMYEALSAKENIEKVGADDMYNPWYNILKKQGKGTLMYRGTWNLFDQIVMTPNLLNKKGE 289 Query: 273 ESFSEILYNEDDIKSRGK-----------------------RLSDHCPISI 300 +F+ + + ++ I+ SDH P+ + Sbjct: 290 NNFTTLKFWKNQIQRMPYLFQSEGQYKGSPKRTTAGGVWLDGFSDHLPVCV 340 >gi|229527450|ref|ZP_04416842.1| extracellular nuclease-related protein [Vibrio cholerae 12129(1)] gi|229335082|gb|EEO00567.1| extracellular nuclease-related protein [Vibrio cholerae 12129(1)] Length = 869 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 49/373 (13%), Positives = 90/373 (24%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R ++ + LDADIV L E Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116 + + S R D I T + Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162 R K V++ Q + ++ + R + ++ G KI V Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652 Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211 HLKS + + L Q + VI GD Sbjct: 653 HLKSKGSACWEDAAPVEQGGQAGQDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712 Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243 N D I + + K Sbjct: 713 NSYGMDDPMLVLTDYTPEKYRKTIRAARNTYIAGVEQFGDAGAEIKHSYGYLNAVAIKHP 772 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290 + +D+ ++ + ++ + I E + Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 833 RASDHDPAVLELN 845 >gi|257125417|ref|YP_003163531.1| endonuclease/exonuclease/phosphatase [Leptotrichia buccalis C-1013-b] gi|257049356|gb|ACV38540.1| Endonuclease/exonuclease/phosphatase [Leptotrichia buccalis C-1013-b] Length = 248 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 90/290 (31%), Gaps = 59/290 (20%) Query: 24 VRLVSWNINTLSE---QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----- 75 ++ + +NI + + + + R+ + ++ DIV L E+ Sbjct: 1 MKFLLYNIRYGTGKYLNQPFKHMRGYLGRSVRHIYRIGKFINKYKPDIVGLVEVDLGSFR 60 Query: 76 --SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 S N + Y + + + A+ K + ++ + L Sbjct: 61 MYSRNQATLLGRITRNNNVYQYKYEEDSNYMKFPMVRKQGNALLSKKPVLREEFHYLDIG 120 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 L++E+ + + V +HL +Q L + Sbjct: 121 MKK-----------LIIEVETEDVVVFLVHLALGG-------------KTRQKQIVQLYN 156 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 ++ K+ P ++AGDFN + N ++ + P + Sbjct: 157 FVKNCKK---PVIVAGDFNVFWGEEEIEMFLQASNLRNINIRKDP--------TFPSWNP 205 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K +D+ + + S+ I +LSDH PI +D++ Sbjct: 206 KRELDFILCSKEIKVK----SYEVIQT----------QLSDHLPILVDFE 241 >gi|170582912|ref|XP_001896345.1| exodeoxyribonuclease III family protein [Brugia malayi] gi|158596475|gb|EDP34813.1| exodeoxyribonuclease III family protein [Brugia malayi] Length = 314 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 85/309 (27%), Gaps = 75/309 (24%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 ++++++SWN+ L + + DI+ LQE + Sbjct: 55 SGREIKIISWNVAGLRALIKKNG---------------HSVLVEENPDIIALQETKCVDV 99 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 +++ +N + F + H + + K+ + S+ D Sbjct: 100 PSEL--QNGYHTFLNASEKSGHGGV---------LLLTKEEPIKVTYSFDDKSKCDIDGN 148 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + + ++++ ++ + + + L Sbjct: 149 GKGRIIIA-----EYESYYLINAYVPNSGRGLVNLDKRKIWDDYYLTFIKKL-------- 195 Query: 200 ESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDS 243 + P V GD N + + + + F + Sbjct: 196 DLSKPVVYVGDLNVAHQEIDLANPKTNRNKTAGFTDQERNDFTRLLDAGFVDVFRRLNPD 255 Query: 244 RCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + A N +DYFV+ + + + + + SD Sbjct: 256 KEGAYTFWSNMHNAREKNVGWRLDYFVVSERIMNKVKKCDILHSI-----------KGSD 304 Query: 295 HCPISIDYD 303 HCP+S+ + Sbjct: 305 HCPLSLTIE 313 >gi|254450397|ref|ZP_05063834.1| exodeoxyribonuclease III [Octadecabacter antarcticus 238] gi|198264803|gb|EDY89073.1| exodeoxyribonuclease III [Octadecabacter antarcticus 238] Length = 262 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 32/306 (10%), Positives = 71/306 (23%), Gaps = 71/306 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L +WNIN++ +EG+ + + D++ LQE S Sbjct: 2 SFTLATWNINSVRLREGL----------------VARLMTQEAPDVLCLQECKSPVDKIP 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + L H + +A+ K + + + AG Sbjct: 46 L---------EQFQALGYHHMVARGQKGYNGVAIFSKMPIEEVAAEDFVSLGHARHIAGR 96 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + V + ++ + D + ++D+ Sbjct: 97 L----------DNGVTVHNFYVPAG--GDKPNREVNEKFGQKLDYLTEMRDYFGANAPEK 144 Query: 203 VPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N D + + + N Sbjct: 145 S--ILVGDLNIAPREDDVWDHKKLLKVVSHTPVEVEHLADVQGAGDWVDVTRADIPHGNL 202 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + ++ SDH P Sbjct: 203 YSWWSYRAPDWESADKGRRLDHVWATPDIANSAHSS-------RVIRAVRGWEQPSDHAP 255 Query: 298 ISIDYD 303 + +D Sbjct: 256 VFATFD 261 >gi|257415859|ref|ZP_05592853.1| predicted protein [Enterococcus faecalis AR01/DG] gi|257157687|gb|EEU87647.1| predicted protein [Enterococcus faecalis ARO1/DG] Length = 278 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 42/287 (14%), Positives = 85/287 (29%), Gaps = 46/287 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+++ ++N+ V + + + + Q D + +QE+ Sbjct: 24 KMKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDL 76 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS---- 138 Y+T ++ + AI ++ V+ + Y L Sbjct: 77 KA--------YTTFTCLSAEREGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHP 128 Query: 139 -RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R A+ L + V+++HL + + ++ + L D I Sbjct: 129 EAGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKI 180 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-PKEKDSRCNANKNLRNK 254 Q P ++ GDFN + + K D + + PK K Sbjct: 181 AQY-----PTLLMGDFNAESGEAVHQLVQKKFQDSKNLATHYGPKGTFQNFTYTKPWAEL 235 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + + + G+ SDH P+ + Sbjct: 236 EEIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 272 >gi|225569150|ref|ZP_03778175.1| hypothetical protein CLOHYLEM_05230 [Clostridium hylemonae DSM 15053] gi|225161949|gb|EEG74568.1| hypothetical protein CLOHYLEM_05230 [Clostridium hylemonae DSM 15053] Length = 250 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 78/303 (25%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N + + + DADI +QE Sbjct: 1 MKCISWNVNGIRACVQKGFM---------------DFFQEADADIFCIQETKMQEG-QLE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ AV K + + D R Sbjct: 45 LETPGYFQYWN----------YAERKGYSGTAVFTKKEPLSFTCGIGIEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++ + + ++ + + + + L++ Sbjct: 91 -----VITLEFEEFYFVTVYTPNSQSELARLSYRMEWEDAFLAYLKKLEE--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + ++ I + + F Sbjct: 138 PVIFCGDLNVAAEEIDLKNPKTNRKNAGFTDEEREKFRKIKASGFVDTFRYFYPDEEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + Q+ + L SDHCP+ Sbjct: 198 SWWSYRFRAREKNAGWRIDYFCVSQSLKERLEDARIHT-----------DVMGSDHCPVE 246 Query: 300 IDY 302 +D Sbjct: 247 LDL 249 >gi|167521878|ref|XP_001745277.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776235|gb|EDQ89855.1| predicted protein [Monosiga brevicollis MX1] Length = 362 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 35/314 (11%), Positives = 76/314 (24%), Gaps = 34/314 (10%) Query: 19 SVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + ++ + ++N+ + L S + LL Q + D++ L E + Sbjct: 47 TQQLRLTVAAFNVLADGLDVNGQWSYIDPATVTFERRKDLLLQEIDRIAPDVLGLAECNN 106 Query: 77 -YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 A + + + + + R A+ VR L + Sbjct: 107 FTEFWAPELARRGYHGVFQPKSH-GPAARFGAQPDGVALFVRTAAGLELIGEPLRNAMRP 165 Query: 136 SFSRAGNRRAVELLVEINGKK-----------IWVLDIHLKSFCFLDSLENTYSPSCSLL 184 A R + IN V H K+ + + Sbjct: 166 VAISALVRAGLTAESTINKSSTPAMTSSPAFLFRVAMTHFKAGKGDSNTALRRQDT---- 221 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----LGNNDDFWKTIDPNDSLIRFPKE 240 L + + ++ GDFN + F ++ ++ Sbjct: 222 QMLLTQLDAAAAAAESEVQATIVMGDFNCEPTEDCHAPWRERGFLCAVEDMPWTTWKFRD 281 Query: 241 KDSRCNANKNLR---------NKIPIDYFVM--DQNAYKFLIQESFSEILYNEDDIKSRG 289 + + IDY + A + + Sbjct: 282 TPTEPGTAPPPGTAPLTQPKEKREKIDYIYVLNGPGAQVAVEAFLDVPADADIPRALPAP 341 Query: 290 KRLSDHCPISIDYD 303 SDH ++ + Sbjct: 342 NYASDHLAVAARLN 355 >gi|325182155|emb|CCA16608.1| exodeoxyribonuclease putative [Albugo laibachii Nc14] Length = 375 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 77/307 (25%), Gaps = 66/307 (21%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A+ +++++WN+N L + Y + DADI+ L E + Sbjct: 110 AESLKIIAWNVNGLRALLKYDESRYFH-----------AYVREEDADIICLSETKIDSPQ 158 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + + + AV K + +S+ S Sbjct: 159 VEKMEDLLPKYPFQYWSCA-------HKKGYAGTAVCSKLEPLQVRSHLDDSTLGSTEGR 211 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + + +K W++ ++ + + A L+ + +KE Sbjct: 212 F--------LALEFEKFWLVHTYVPN-----AGMKLERLGDRTTQWDAVLLQTLQSLEKE 258 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA------------- 247 S + GD N + +D Sbjct: 259 SEKGVIWCGDLNVAHQDIDIHDPKNNRNKSPGFTDAERNNFGETLKTGFVDTFRHFHPEK 318 Query: 248 --NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +DYFV+ + + G + SDH Sbjct: 319 QQFTYWSYRFNARTRNKGWRLDYFVVSERLMAQVKASFVR-----------EGVKGSDHV 367 Query: 297 PISIDYD 303 P+ Sbjct: 368 PVGAILS 374 >gi|255077378|ref|XP_002502331.1| predicted protein [Micromonas sp. RCC299] gi|226517596|gb|ACO63589.1| predicted protein [Micromonas sp. RCC299] Length = 328 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 47/323 (14%), Positives = 82/323 (25%), Gaps = 48/323 (14%) Query: 25 RLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAVA 81 R+ S+NI +S + + L LD+D++ LQE+ Sbjct: 6 RITSYNILAQCYVRSSYFPHSPSSCLKWKARSRNLVNELAGLDSDVLALQEVDQYEEFWQ 65 Query: 82 KVFPKNTWCIFYSTERLINHSKRDS-------------------NNDIHTAIAVRKKNVR 122 + + Y + SKRD NDI V + Sbjct: 66 PWLVERGYDGVYKCRTQLTKSKRDGCGLFFKRDKFELLARRDIEYNDIAWGRPVGYVHPE 125 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW--VLDIHLKSFCFLDSLENTYSPS 180 + D + R V +L + K + + + + + Sbjct: 126 GSPEPTEAPVDADGGANKYIRDCVGVLALLRSKTATDGYVMVASTHLYWDPAHADVKLAQ 185 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW--------------- 225 L + + + VP V AGDFN ++ Sbjct: 186 ARRLLGEVELFLA--SNSPIGSVPVVTAGDFNSVPGSEVHSAMLGGFGGRRLRSAYAAAI 243 Query: 226 -----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 + D + + N IDY +D Sbjct: 244 GEGVVRGADGGSDSSVAVGKHGEPAHTNVTPGFTDCIDYVFVDDGVAVR--SAMPLPGRD 301 Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303 R SDH P+++D + Sbjct: 302 EVATGLPDATRGSDHLPLTVDLE 324 >gi|149409019|ref|XP_001506333.1| PREDICTED: similar to Ribosomal protein S2 [Ornithorhynchus anatinus] Length = 315 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 33/285 (11%), Positives = 79/285 (27%), Gaps = 30/285 (10%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81 +++ S+NI T E + ++ + DI +QE+ AV Sbjct: 56 LKIASFNIRTFGE---------KKITNVTIADVIVKILNRY--DIALIQEVRDSRLTAVG 104 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K+ K + +++ + R + V +L + + Sbjct: 105 KLMDKLNRDSPDTYRFVVSEPLGRGSYKEQYLFVFRPEKVSLLDSYQYDDSRESFGNDTF 164 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R + ++ ++ I + +L + W + Sbjct: 165 SREPMVVMFSSPSTEVKEFVIVPLH----AAPAEAVKEIDALYDVYLDIISKW------N 214 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 + + GDFN +Y+ + + N + + D V Sbjct: 215 MDNILFMGDFNAGCSYVSASSWSAIRLRTNPKFQWLISDDVDTTVTSTYCPY----DRIV 270 Query: 262 MD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303 + + S + + +SDH P+ + + Sbjct: 271 ASGKKLRSSIGPGSAFPFHFEKAYKLKQEMALAVSDHYPVEVTIE 315 >gi|228936354|ref|ZP_04099152.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228823186|gb|EEM69020.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 337 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 43/322 (13%), Positives = 106/322 (32%), Gaps = 60/322 (18%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T + + + +N ++D Sbjct: 35 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 94 Query: 71 LQEMGSYNAVAKVFPKNTW-----------CIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 LQE+ + + + + + + ++ K Sbjct: 95 LQEVDIKSMRSFDVNGHEFLKKGLSDYASSFGKNYDTKWVPVPITSPMGYAEAGLSTFSK 154 Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176 + + L G + R + R VE + +N GK + ++++HL + Sbjct: 155 YTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---------- 204 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 Y + QQ ++LK ++ + E ++ GD+N+ ++ + +D + P+ + Sbjct: 205 YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPDWLVEL 264 Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280 D + ID F++ N ++ ++ + Sbjct: 265 PKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 322 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 SDH P+S + Sbjct: 323 EN----------SDHNPVSAVF 334 >gi|229496037|ref|ZP_04389761.1| endonuclease/Exonuclease/phosphatase family protein [Porphyromonas endodontalis ATCC 35406] gi|229317129|gb|EEN83038.1| endonuclease/Exonuclease/phosphatase family protein [Porphyromonas endodontalis ATCC 35406] Length = 334 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 35/329 (10%), Positives = 84/329 (25%), Gaps = 55/329 (16%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD-- 65 + ++++++++N+ L + + + +R + + ++ Sbjct: 8 ARGERIKVMTFNVENLFDTMHDEGKNDYEYLPEGANEWTRERYLRKLRNVGEVISDVGGV 67 Query: 66 --ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 +V L E+ + + + + + I A+ K Sbjct: 68 GWPLLVGLVEVENEVVMDDLLHSTP---LGTRGYEYAITHSPDERGIDVALLYIKDLFCP 124 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 + + S +R + + NG + V+ +HL S S Sbjct: 125 DKVEEFQVKFPHSPHTL-SRNILYVHGHLFNGVPLHVMVVHLPSRREG------KRASDR 177 Query: 183 LLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFW-----KTIDPNDSLI 235 L+ KE ++ GDFN + +T D + Sbjct: 178 KRKDVVSLLQAKCDSILNKEPGASILVMGDFNTTPRDPITHVWAHPLASRRTAYRADLMY 237 Query: 236 RFPKEKDSRC--NANKNLRNKIPIDYFVMDQNAYKFLIQESF------------------ 275 S + + ID V+ + ++ Sbjct: 238 DLTSLVPSGVIPGSYRYRGVWQQIDRIVVSGSMLLADNPITYLWESARSVMMRRWMQQDA 297 Query: 276 --SEILYNEDDIKSRGKRLSDHCPISIDY 302 +SDH P+ + Sbjct: 298 DGELSPKRTYGGHFYMGGVSDHLPVVAQF 326 >gi|178743|gb|AAA58371.1| apurinic endonuclease [Homo sapiens] Length = 318 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 76/311 (24%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 ++ +++ SWN++ L + K DI+ LQE Sbjct: 53 TSPSAKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K+ + S + S+ + ++ + + + + G Sbjct: 98 KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D R V ++ ++ + + + L Sbjct: 148 DEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ + L Sbjct: 255 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 306 --ASDHCPITL 314 >gi|255532760|ref|YP_003093132.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] gi|255345744|gb|ACU05070.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] Length = 621 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 70/287 (24%), Gaps = 49/287 (17%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + +++S+N+ + + T +RQ + + DI +QE Sbjct: 52 AGESPFKVLSFNVRHNDAGD--------PQTITQRQGNIRQIIVDNNPDIFGVQEFSDDT 103 Query: 79 ---AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + ++ST T + + L + Sbjct: 104 FKTWFRAQMATLGYGEYFSTTLTATP---------KTIFFKNSRFTLERSGTVRLGASPI 154 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + A +++ N + S A L + Sbjct: 155 INT------ATWVVLLDNSTSNRYFISNSHW----------QFDSQPTRIANANALVAMV 198 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + +P ++ GDFN K N D D + Sbjct: 199 NAQNTDNLPVIVFGDFNAKPGTTEINALK----DGLDVVDALGDSTGDPTFHGWTSTGTN 254 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ + S +N G SDH P+ Y Sbjct: 255 KIDWIM---------SDRSMGFTSWNVITTSYGGYWPSDHWPVIATY 292 >gi|315173180|gb|EFU17197.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX1346] Length = 254 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 84/287 (29%), Gaps = 48/287 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+ V + + + + Q D + +QE+ Sbjct: 1 MKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138 Y+T ++ + AI ++ V+ + Y L Sbjct: 54 A--------YTTFTCLSAEREGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHPE 105 Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A+ L + V+++HL + + ++ + L D I Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNANKNLRNK 254 Q P ++ GDFN + + + K N + P+ K Sbjct: 158 QY-----PTLLMGDFNAE-SEEEVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAEL 211 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + + + G+ SDH P+ + Sbjct: 212 EEIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248 >gi|47096406|ref|ZP_00234000.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes str. 1/2a F6854] gi|254900495|ref|ZP_05260419.1| hypothetical protein LmonJ_11794 [Listeria monocytogenes J0161] gi|254913554|ref|ZP_05263566.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes J2818] gi|254937865|ref|ZP_05269562.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes F6900] gi|47015201|gb|EAL06140.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes str. 1/2a F6854] gi|258610472|gb|EEW23080.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes F6900] gi|293591565|gb|EFF99899.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes J2818] Length = 256 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 77/285 (27%), Gaps = 35/285 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + ++NI K TL + D + ++E + + Sbjct: 2 FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEEPLLPQ-MRDM 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 W F + ++ + P + + S + R Sbjct: 54 KEMQDWDYFGVGRDDGFEKGEFTAVFYNSTRFTLLQEGHFWLSETPDVPSIHSTAM-FPR 112 Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V + +GK+ ++ + HL A L Sbjct: 113 ICVWGKFADSDGKQFYIFNTHLDHIS-------------EEARLFASQLLLKKAATIVEN 159 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDY 259 P +I GDFN + + N K D + K + + LR IDY Sbjct: 160 SPVIILGDFNTEPDTPTYNFITKKYQDAQLISQKHAKGPIGSFHDFRPLRPINELEKIDY 219 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + F Y + G SDH P++ + D+ Sbjct: 220 IFVSEE---------FQVCTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|241762159|ref|ZP_04760242.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753749|ref|YP_003226642.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283856531|ref|YP_163434.2| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ZM4] gi|241373409|gb|EER63009.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258553112|gb|ACV76058.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775536|gb|AAV90323.2| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ZM4] Length = 264 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 36/307 (11%), Positives = 86/307 (28%), Gaps = 71/307 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+VSWNIN + + ++ K DI+ LQE + N V Sbjct: 1 MRIVSWNIN----------------SVRARLAHVERFLKEEQPDILCLQETKATNG---V 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + +A+ + + + + D + R Sbjct: 42 FPSRFFYDLGYIHQ------AVHGQPGYNGVAILSRIAFSPAE----ITSHDWQNNQEAR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +E + + ++++ + + Q+ ++ I Sbjct: 92 H-IGITLENG---VRLENVYIPAGGDIPD-----RDLNPKFGQKLDFISRMIEWSSHLEQ 142 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GDFN + D + ++ + + Sbjct: 143 PTILVGDFNIAPLESDVWSHKQLLKVVSHTPIEVDHLSRLQASHNWIDLGRHFYPAPERL 202 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + L+ + + SDH P Sbjct: 203 YTWWSYRSKDWTKSDRGRRLDHMWASPSLVDHLVGH-------KVYESCRSWIKPSDHVP 255 Query: 298 ISIDYDF 304 + ++ F Sbjct: 256 LLTEFSF 262 >gi|126738695|ref|ZP_01754400.1| exodeoxyribonuclease III, putative [Roseobacter sp. SK209-2-6] gi|126720494|gb|EBA17200.1| exodeoxyribonuclease III, putative [Roseobacter sp. SK209-2-6] Length = 276 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 32/310 (10%), Positives = 69/310 (22%), Gaps = 75/310 (24%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--N 78 A L +WNIN R D + + + D++ LQE S Sbjct: 14 AMAFTLATWNIN--------------SVRLREDL--VLKLLQEEAPDVLCLQECKSPVEK 57 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + F + H + +A+ K + Sbjct: 58 IPTEGFASLGY-----------HHMVARGQKGYNGVAILSKLPLKDVGDKDFANLGHARH 106 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 V +E + + + ++ + D + + ++DW + Sbjct: 107 -------VAAELENG---VTIQNFYVPAG--GDKPDREVNEKFGQKLDYLTEMRDWFRSE 154 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDS 243 ++ GD N D + + Sbjct: 155 APKKS--ILVGDLNIAPREEDVWDHKKMLKVVSHTPIEVEHLAEVQEAGGWQDVTRADIP 212 Query: 244 RCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + +D+ + + ++ S Sbjct: 213 DGLLYSWWSYRAKDWDAADKGRRLDHVWATGDISQSASSS-------RILRAARGWEKPS 265 Query: 294 DHCPISIDYD 303 DH P+ +D Sbjct: 266 DHAPVFASFD 275 >gi|256618819|ref|ZP_05475665.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis ATCC 4200] gi|256598346|gb|EEU17522.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis ATCC 4200] Length = 254 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 41/287 (14%), Positives = 85/287 (29%), Gaps = 48/287 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+ V + + + + Q D + +QE+ Sbjct: 1 MKIATYNVR-------VDTKYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138 Y+T ++ + AI ++ V+ + Y L Sbjct: 54 A--------YTTFTCLSAEREGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHPE 105 Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A+ L + V+++HL + + ++ + L D I Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNANKNLRNK 254 Q P ++ GDFN + + + K N + P+ K Sbjct: 158 QY-----PTLLMGDFNAE-SGEEVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAEL 211 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + +S+ G+ SDH P+ + Sbjct: 212 EEIDYIYV----------KSWQVQQTASLTDSIDGRFPSDHFPLEAE 248 >gi|37993801|gb|AAR06976.1| sphingomyelinase [Bacillus cereus] Length = 252 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 82/230 (35%), Gaps = 26/230 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSAPDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDHFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230 Q + ++D+I + + +I GD N +KT++ Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNA 247 >gi|58584173|ref|YP_203189.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae KACC10331] gi|188579169|ref|YP_001916098.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae PXO99A] gi|58428767|gb|AAW77804.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae KACC10331] gi|188523621|gb|ACD61566.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae PXO99A] Length = 259 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 85/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ SWN+N+L+ L+Q+ D+V +QE + + Sbjct: 1 MKIASWNVNSLN----------------VRLPHLQQWLTAFAPDVVGIQETKLEDHRFPD 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + +A+ ++ + Q F Sbjct: 45 AALAELGYRSVFC------------GQKTYNGVAILSRSPALDVQ-----MGIPGFDDVQ 87 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + ++++++ + + + + Y + DWI Q+ ++ Sbjct: 88 QRVIAATV-----DGVRIINLYVVNGQDVGTDKYAYK------LRWLAAAHDWIAQELQT 136 Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPND-----------SLIRFPKEKDSRCN 246 V+ GDFN + +D + D L + Sbjct: 137 YPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAALEKLLAMGLHDAFRLHTQDAE 196 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID ++ ++ D +R SDH P Sbjct: 197 HFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGI-------DREPRTWERPSDHAP 249 Query: 298 ISIDY 302 + Sbjct: 250 AWVRL 254 >gi|310823846|ref|YP_003956204.1| hypothetical protein STAUR_6620 [Stigmatella aurantiaca DW4/3-1] gi|309396918|gb|ADO74377.1| uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 397 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 35/279 (12%), Positives = 74/279 (26%), Gaps = 54/279 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R +++NI S + D+V LQE+ + Sbjct: 1 MRFMTYNI---------------KHAELSSLEAIASVINAQAPDVVALQEVDVLTVRSNR 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + S + +A+ + Q PL A + Sbjct: 46 VDQAARLGQLTGLSHAFIPSLTSYDSGQYGLAILSRYPIRSAQRLPLRSAAEQR------ 99 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V L E+ ++ + + F + + QQA+ +K + Sbjct: 100 --VLALFEVELAPSRLIPVGVTHFGTTGA---------TERVQQAEDIKAALA----GKP 144 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 ++ GD N + + + D + + IDY ++ Sbjct: 145 WALLGGDLNASPSESSISSLLQQFTDAWA------RGGSGSGYTHSATLPTKRIDYVLLG 198 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + S + SDH P++ Sbjct: 199 SA---WTSPLTASVVNAPSQ---------SDHRPLAATL 225 >gi|146304199|ref|YP_001191515.1| exodeoxyribonuclease III Xth [Metallosphaera sedula DSM 5348] gi|145702449|gb|ABP95591.1| exodeoxyribonuclease III Xth [Metallosphaera sedula DSM 5348] Length = 248 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 84/303 (27%), Gaps = 79/303 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++SWN+N L G L K + DI+ QE+ S + Sbjct: 1 MKILSWNVNGLKAILGKG---------------LLDLVKKQEYDILMFQEVKSSQ-LPID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + + + + + + + + G D + R Sbjct: 45 FQLLPYRSYLYPAKKKGY----------SGTLTLTRIEPISAK----YGIGDEEFDSEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +K++V++++ + + E L Q + K Sbjct: 91 -----VIALEFQKVYVINVYFPN-----AGEELKRLDFKLRFNQ-----RFHEFVKNLGK 135 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTI-------DPNDSLIRFPKEKDSRCN-------ANK 249 P VI GDFN + + Sbjct: 136 PCVICGDFNVAHEEIDIARPKDNVNHAGFTPEERKWFHEFLASGFVDTFRIFVKEGGHYS 195 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY V+ + K + + E + SDH P+++ Sbjct: 196 WWSYRFHAREKNIGWRIDYCVVSKELEKHVKKAEILEKV-----------MGSDHAPVTL 244 Query: 301 DYD 303 + D Sbjct: 245 ELD 247 >gi|167742958|ref|ZP_02415732.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 14] Length = 292 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 75/285 (26%), Gaps = 56/285 (19%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 +++R+ ++NI+ T S + L AD++ LQE+ Sbjct: 1 QPRTRELRIATYNIHG-----------GLGAWTASAAERIAVVLDELCADVIALQEVPLG 49 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A + T AV + + L SF Sbjct: 50 GARGADV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----SF 101 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R A++ +E + V+ HL S + S Q L + Sbjct: 102 GNREPRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LAA 145 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 +P ++ GD N + F + + F + R + Sbjct: 146 FDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS--L 194 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D + ++L+ + DH P+ Sbjct: 195 DRIWVHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 229 >gi|29293902|gb|AAO63565.1| RNA editing complex protein MP100 [Trypanosoma brucei] Length = 902 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 87/299 (29%), Gaps = 35/299 (11%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSL--WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 V ++L++WN+ + + Y ++ + + DAD+V +QE+ Sbjct: 613 PVKASLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPKRYPVIAKIIEEEDADVVGMQEVE- 671 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + F S LI S + AIA + + ++ P+ Sbjct: 672 ----------PVFWEFLSKRALIRQRYYFSCGHMSPAIAPWGVLMLIHRRRLPVQSINYL 721 Query: 137 FSRAGNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 A + +++ + + HL + S +L + L Sbjct: 722 NVPAWTNHVSLMPVVGLKMVHGTVHIAAAHLLAPYTKSHENARTSQDTALRHHMTKTL-- 779 Query: 194 WITQKKESLVPFVIAGDFNRKIN------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 V GDFN + D W + PN+ E ++ C Sbjct: 780 -------GGGDVVTMGDFNDWPTNEFIMPHESQYVDCWPVLHPNNPGKTM-DETNTFCKL 831 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303 D + + N+++ + SDH +SI + Sbjct: 832 KVEEMFFGRSDKVFLRSRRLVPVEAHLVGTRSVNDENNNADAPAYLFPSDHYGVSITFS 890 >gi|78355598|ref|YP_387047.1| exodeoxyribonuclease III [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218003|gb|ABB37352.1| exodeoxyribonuclease III [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 336 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 78/303 (25%), Gaps = 74/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 V+L SWN+N W + DAD++ LQE K Sbjct: 82 VKLYSWNVNGFRAIRQKPDW---------------DWFSGCDADVIGLQE-------TKA 119 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ + ++ + ++ +A + + + R Sbjct: 120 MPEQIDPADRNPAGYHSYWLGATVKKGYSGVAAFSRREPLSVA----YDLPVEQYQGEGR 175 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +I+ + D + AQ L+ Sbjct: 176 -----VIMLEYDAFYYFNIYFPNGQSGDERLQYKLGFYDAFLEHAQTLRR--------KK 222 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GDFN +L + + + F Sbjct: 223 PIVVCGDFNTAHRPVDLARPRENEGTSGFLPVERAWMDKFIDHGYVDTFRLVHPDAQAMY 282 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + + ++ SDHCP+ Sbjct: 283 SWWSYRFKARDRNVGWRIDYFFVSDELRHAVKDATIEMEVF-----------GSDHCPVG 331 Query: 300 IDY 302 ++ Sbjct: 332 LEL 334 >gi|330834656|ref|YP_004409384.1| exodeoxyribonuclease III Xth [Metallosphaera cuprina Ar-4] gi|329566795|gb|AEB94900.1| exodeoxyribonuclease III Xth [Metallosphaera cuprina Ar-4] Length = 256 Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 82/305 (26%), Gaps = 82/305 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++SWN+N+L ++ L + K+ + D++ QE+ + + Sbjct: 8 LKILSWNVNSL---------------KSAIAKGLMEIIKSEEYDVLMFQEIKTNQ-LPLD 51 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + + + + ++ + + D R Sbjct: 52 FQSLPYRAYINPSKQK---------RGYSGTLTLTRIEPISVTYGIGKEEFDVEGR---- 98 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ K ++V++++ + + + L Sbjct: 99 -----VISTEFKSMFVINVYFPNAGEGLKRLDFKLRFNRAFQEYVASL----------GK 143 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P VI GDFN F + + + + Sbjct: 144 PSVICGDFNVAHEEIDIARPKDNVNHAGFTPEERKWFHEFLLSG--FVDTFRLFVKEPGH 201 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY V+ + + + E + SDH P+ Sbjct: 202 YSWWSYRFHAREKNIGWRIDYCVVSKELESKVKKAEILEKV-----------MGSDHAPV 250 Query: 299 SIDYD 303 +++ Sbjct: 251 TVEIS 255 >gi|84625943|ref|YP_453315.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84369883|dbj|BAE71041.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 259 Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 85/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ SWN+N+L+ L+Q+ D+V +QE + + Sbjct: 1 MKIASWNVNSLN----------------VRLPHLQQWLTAFAPDVVGIQETKLEDHRFPD 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + +A+ ++ + Q F Sbjct: 45 AALAELGYRSVFC------------GQKTYNGVAILSRSPALDVQ-----MGIPGFDDVQ 87 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + ++++++ + + + + Y + DWI Q+ ++ Sbjct: 88 QRVIAATV-----DGVRIINLYVVNGQDVGTDKYAYK------LRWLAAAHDWIAQELQT 136 Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPND-----------SLIRFPKEKDSRCN 246 V+ GDFN + +D + D L + Sbjct: 137 YPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAALEKLLALGLHDAFRLHTQDAE 196 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID ++ ++ D +R SDH P Sbjct: 197 HFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGI-------DREPRTWERPSDHAP 249 Query: 298 ISIDY 302 + Sbjct: 250 AWVRL 254 >gi|283833916|ref|ZP_06353657.1| endonuclease/exonuclease/phosphatase family protein [Citrobacter youngae ATCC 29220] gi|291070588|gb|EFE08697.1| endonuclease/exonuclease/phosphatase family protein [Citrobacter youngae ATCC 29220] Length = 253 Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 79/282 (28%), Gaps = 46/282 (16%) Query: 28 SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV---- 83 S+N+ T++ +G + + LR+ + + ADIV LQE+ + V + Sbjct: 9 SFNVLTINTHKGFTAFNRRF-----ILPELREAVRTVGADIVCLQEVLGAHEVHPLHVEN 63 Query: 84 FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +P T F + + + + H AV + S + Sbjct: 64 WPDTTHYEFLADTMWSDFAYGRNAVYPQGHHGNAVLSRYPIE-----HFENRDVSVGASE 118 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + V + + + Q L DW+ Sbjct: 119 KRGVLYCRIVPPMLSHPVHVMCVHLGLR-----------EAHRQAQLAMLADWVNA-LPE 166 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI-RFPKEKDSRCNANKNLRNKIPIDYF 260 P V+AGDFN + N L F + + +D Sbjct: 167 GEPVVVAGDFNDW------RQKANHPLKANADLDEIFTRAHGRPARTFPVQFPLLRLDRI 220 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + LSDH P+S + Sbjct: 221 YVKNANAS-----------TPTALALRHWRHLSDHAPLSAEI 251 >gi|265767421|ref|ZP_06095087.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263252726|gb|EEZ24238.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 608 Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 89/305 (29%), Gaps = 67/305 (21%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +RK +L L L +A +RL+++N+ + +G+ +Y + Sbjct: 1 MRKLLLLLFSALFVLSAQAEDVLRLMTYNVRNANGMDGIC-----------NYQRVANVI 49 Query: 62 KNLDADIVFLQEMGSYNAVA---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N DIV +QE+ S A + V + + I + Sbjct: 50 NNARPDIVAIQELDSMTARSNRTDVLKELAERTQLHPCFAPAID----YDGGKYGIGILS 105 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K + Q++ L G R R + + HL Sbjct: 106 KETPLRVQTFALPG------REEARTLLVAEFP----EYVFACTHLSLTEED-------- 147 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--FWKTIDPNDSLIR 236 + + L+ + ++ PF +AGDFN + D ++ + Sbjct: 148 --------RMKSLEILKSVAADTRKPFFLAGDFNSDADSGFIKDLKSTFQILS------- 192 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 K +DY + + + S I SDH Sbjct: 193 ---NPKQPTYPAS--EPKETLDYLIALKQETPTFVVNSARVI---------DEPLASDHR 238 Query: 297 PISID 301 P+ ++ Sbjct: 239 PLLVE 243 >gi|302382037|ref|YP_003817860.1| exodeoxyribonuclease III Xth [Brevundimonas subvibrioides ATCC 15264] gi|302192665|gb|ADL00237.1| exodeoxyribonuclease III Xth [Brevundimonas subvibrioides ATCC 15264] Length = 257 Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 79/302 (26%), Gaps = 70/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NIN ++ L ++ D+ LQE+ + Sbjct: 1 MRIATFNINGINS----------------RLPNLLEWLAGTQPDVACLQELKAPQD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +A+ ++ + L G + Sbjct: 41 ------RFPEGAIEEAGYHAAWVGEARWNGVAILSRHGPPVVTRRALPGDRKDVQSRYLE 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 AV + V ++L + + Y + + L ++ Sbjct: 95 AAV--------NGVLVGCLYLPNGNPQPGPKFDYKLA------WFERLIAHAGTLFDTEA 140 Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247 P V+AGD+N D F + +D + + Sbjct: 141 PVVLAGDYNVVPTEADIYDSRSWKKNALLQPESRAAFARMLDDGWTDALRERFPHEAVYT 200 Query: 248 NKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ +++ A L+ D ++ SDH P I Sbjct: 201 FWDYLRDGWSRNAGLRIDHLLLNPQAAGRLVDAGV-------DAGVRGREKASDHAPAWI 253 Query: 301 DY 302 + Sbjct: 254 EL 255 >gi|257877428|ref|ZP_05657081.1| exodeoxyribonuclease [Enterococcus casseliflavus EC20] gi|325568814|ref|ZP_08145107.1| exodeoxyribonuclease III [Enterococcus casseliflavus ATCC 12755] gi|257811594|gb|EEV40414.1| exodeoxyribonuclease [Enterococcus casseliflavus EC20] gi|325157852|gb|EGC70008.1| exodeoxyribonuclease III [Enterococcus casseliflavus ATCC 12755] Length = 250 Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 80/304 (26%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + + + LDAD LQE Sbjct: 1 MKFISWNVNGLRAIVKKNF---------------SEVFEALDADFFCLQETKLQEG-QIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + + + D+ R Sbjct: 45 LDLPGYHQYWNYAEKKGY----------SGTAIFAKEPALSVRYGLGIEEHDTEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ + + ++ + + Sbjct: 91 -----VITLEYPEFFLITCYTPN-------SQNELRRLDYRMTWEDAFLAYL-TELKQQK 137 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + T+ F Sbjct: 138 PVILCGDLNVAHKNIDIKNWKTNQKSAGFTPEEREKFSTLLAAGFTDTFRYFYPDAEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + + L+ + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSDDLNERLLDAKIHTDII-----------GSDHCPVE 246 Query: 300 IDYD 303 +D + Sbjct: 247 LDLN 250 >gi|163760748|ref|ZP_02167828.1| Endonuclease/exonuclease/phosphatase family protein [Hoeflea phototrophica DFL-43] gi|162282070|gb|EDQ32361.1| Endonuclease/exonuclease/phosphatase family protein [Hoeflea phototrophica DFL-43] Length = 368 Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 46/365 (12%), Positives = 111/365 (30%), Gaps = 84/365 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRT------------TSDYTLLRQY---------- 60 VR+ ++N L + S ++N +++ + + Sbjct: 2 TVRIATFNAENLLSRFDFSGFRNELRQDRVAQLYDFSSEEQYRQAEIARAVSLTDDTRQM 61 Query: 61 ----AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 DADI+ LQE+ + + + + + + R + + I+ A+ Sbjct: 62 TALAIAEADADILCLQEVENLDTLHRFEYGYLFKMIGDGYRHKVLIDGNDSRGINLALMA 121 Query: 117 RKK------NVRVLQQSY-------------PLLGAKDSFSRAGNRRAVELLVEINGKKI 157 R++ + S+ L G + R +E+ V+I K++ Sbjct: 122 RERTLDGAKIEILEVTSHAHLTYDAAGLYSPDLEGMAHPNDKLFKRDCLEVDVKIGPKRL 181 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK---KESLVPFVIAGDFN-- 212 + +H KS + + + + + +A+ ++ I+ + +VIAGDFN Sbjct: 182 TLYVVHFKSMGSPRNGLDGRTHTMPVRVAEARAVRKLISDRFGADGGGKRYVIAGDFNDY 241 Query: 213 -----------RKINYLGN--NDDFWKTIDPNDSL-IRFPKEKDSRCNA-NKNLRNKIP- 256 ++ D + + + + + + Sbjct: 242 SEKLVITGDRRHGYHFTPEQAEDGAVRVLTADGFAENVVTRRPEMDRWTLYHTRGPQERH 301 Query: 257 ---IDYFVMDQNA---------------YKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +DY + + + + + SDHCP+ Sbjct: 302 LCQLDYLLASPALTRSNRDRLPDIIRAGQPWRTLFPQGQEVERYPRTGWDRPKASDHCPV 361 Query: 299 SIDYD 303 ++ +D Sbjct: 362 AMTFD 366 >gi|325299788|ref|YP_004259705.1| exodeoxyribonuclease III Xth [Bacteroides salanitronis DSM 18170] gi|324319341|gb|ADY37232.1| exodeoxyribonuclease III Xth [Bacteroides salanitronis DSM 18170] Length = 251 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 79/301 (26%), Gaps = 78/301 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L R L+AD LQE A Sbjct: 1 MKLISWNVNGLRACCDKGF---------------RDAFTRLNADFFCLQETK-MQAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ +S + PL + +R Sbjct: 45 LAFDGYTSYWNYAEKKGYSGTAIFT-----------------RHQPLNVSYGMGIDEHDR 87 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E+ +++ ++ + + ++ + ++ Sbjct: 88 EGRVITLEMEN--FYLVTVYTPN-------SQDGLKRLDYRMTWEDAFRRYLLE-LDAKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + ++T+ + F + Sbjct: 138 PVLVCGDLNVAHKEIDLKNPKTNRMNAGFTDQEREKFQTLLDAGFIDTFRYFYPEQEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ L + ++ SDHCP+ Sbjct: 198 SWWSYRFRAREKNAGWRIDYFLASARLAGKLESAAIHTEIF-----------GSDHCPVE 246 Query: 300 I 300 + Sbjct: 247 V 247 >gi|315502756|ref|YP_004081643.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. L5] gi|315409375|gb|ADU07492.1| Endonuclease/exonuclease/phosphatase [Micromonospora sp. L5] Length = 265 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 31/296 (10%), Positives = 65/296 (21%), Gaps = 52/296 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++WNI T G + + D++ LQE + Sbjct: 2 LRVMTWNIRTGGRDAGGT----------DRRDRIVSVVTAQRPDVLALQE---------L 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + S A+ VR + R + Sbjct: 43 RGMDATLGGLAGRLGMTPYLARSCFGQPVAVLVRPPLRVLRAGRVR---------RPFHH 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ--QAQWLKDWITQKKES 201 A + V + V HL + + +L + L + + + Sbjct: 94 AAARVQVATGAGPLTVFSTHLNPYSGGRRRMEADWLAAALRRTGGELALLAGDLNTLEPT 153 Query: 202 LVPFVIAGDFNRKINYLGNNDDFW-------KTIDPNDSLIRFPKEKDS-------RCNA 247 D + + +P+ Sbjct: 154 ADHTARLAGLATPYRRRHLRRDGRTVDTRAVARLLDAGLVDLWPRSGGDEPGGLTVPTRH 213 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +DY + + SDH P+ + D Sbjct: 214 GGAEFAGMRLDYLLASPALADR--------VRAVRVVRDGDADSASDHYPVLAEVD 261 >gi|294676364|ref|YP_003576979.1| endonuclease/exonuclease/phosphatase family protein [Rhodobacter capsulatus SB 1003] gi|294475184|gb|ADE84572.1| endonuclease/exonuclease/phosphatase family protein [Rhodobacter capsulatus SB 1003] Length = 342 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 95/342 (27%), Gaps = 61/342 (17%) Query: 24 VRLVSWNINTLSE----QEGVSLWKNSVKRT----TSDYTLLRQYAKNLDADIVFLQEMG 75 +R+ +N+ + + + R L L+AD + + E Sbjct: 1 MRIACYNVEWFTALFDRRGRMLEDAEESGRYGVTRAEQLGALGIVFTALEADCILIVEAP 60 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 N K P R +N+ A+ +V L A Sbjct: 61 DDNTRRKTVPMLEAFAAKFGLRQRRAVMGFANDTQQEIAALYDPDVLRLWHDPAEGSATA 120 Query: 136 SFSR----------------AGNRRAVELLVEI-----NGKKIWVLDIHLKSFCFLDSLE 174 ++ +EL +E+ GK + ++ +HLKS + + Sbjct: 121 PRFDLSLKIDLDIDDRLDTVHFSKPPLELQLEVLTGPAAGKLLRLIGVHLKSKAPHGATD 180 Query: 175 NTY--SPSCSLLSQQAQW---LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--- 226 + +Q L+ + + ++ ++ GDFN F + Sbjct: 181 PASGVRLAIENRRKQLAQCLWLRRRVDEVLDAGESLIVLGDFNDGPGLDEYEALFGRSGL 240 Query: 227 TIDPNDSLIRFPKEKDSRCN-------------------ANKNLRNKIPIDYFVMDQNA- 266 I + D +DY + + Sbjct: 241 EIVLGTGGPPARQLHDPHARLPRGKTTALPASARFFIPEPPPGQFFSAMLDYIALSPDLC 300 Query: 267 ---YKFLIQESFSEI-LYNEDDIKSRGKRLSDHCPISIDYDF 304 K+ I F + Y +++ + SDH P+S+D F Sbjct: 301 AHAPKWRIWHPFDDPGCYRVAELREALLQASDHFPVSVDLAF 342 >gi|282877586|ref|ZP_06286401.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] gi|281300158|gb|EFA92512.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] Length = 316 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 32/337 (9%), Positives = 86/337 (25%), Gaps = 58/337 (17%) Query: 3 RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRTT 51 Y+L+L+ +V N L + S+ + + +R Sbjct: 1 MTYLLSLLL----------GVFTVVELNCENLFDCRHDSMKHDEQFLPSSDYHWTPRRYW 50 Query: 52 SDYTLLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103 + Q + D+V L E+ + + + + ++ + + Sbjct: 51 QKVNRIGQTILSCGESDEGWSLPDLVALCEVENDSCLVDLTKRS-----LLRKARYEYVM 105 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDI 162 S ++ +A+ + R + ++ + + V + Sbjct: 106 THSPDERGIDVALLYSPFSFQLLQSYSIRIHPMKEMRPTRDILYAKGRVSLRDTLHVFVV 165 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQ-AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 H S + + Q L+ + ++ GDFN Sbjct: 166 HAPSRTAGERPTRAHRRLVINRLLQSVDSLRAL-----SAHPHVLLMGDFNDYSKDENIR 220 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY- 280 + + + +D+ ++D++ + L++ + + Sbjct: 221 QLTEHGLVDVSQQAVGTHGARG---TYRYRGDWGSLDHIMVDEHTAQRLVECHVHDAPFL 277 Query: 281 -------------NEDDIKSRGKRLSDHCPISIDYDF 304 SDH P+ + Sbjct: 278 LKEDEKYGGVQPRRNYLGPRYQNGFSDHLPLVARLRW 314 >gi|221104337|ref|XP_002156804.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 506 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 32/289 (11%), Positives = 81/289 (28%), Gaps = 15/289 (5%) Query: 23 KVRLVSWNIN-----TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS- 76 R++ WNI +E E L+ ++ L+ ++ LQE+ Sbjct: 225 SFRVLQWNILAQGLTYSTETENFCKVPCQFLEWDHRSKLIMEHIDTLNPHVICLQEVDHF 284 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + F++ + +N A+ + + + + + D Sbjct: 285 DDFFVPCLIPKGYRGFFAPKLDSPCFNFPNNGPDGVALFYKSERFLL--KDLVISYLNDG 342 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + + + ++E ++ + + ++ L Sbjct: 343 NEKEKKQAILACVLEDKITCQCIIIAVTHLKAKDGFEMQRVAQANDCINVIESMLNKH-- 400 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-ANKNLRNKI 255 + GDFN + N ++ I+ + L + + K Sbjct: 401 ----KNSSVIWCGDFNSEENEECHSRIKEAKINVKNVLNELSSKMSFTTWKRRPDSEKKQ 456 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY + + + + SDH + +D+ + Sbjct: 457 VIDYIFYSSEYFSPENVLLPPDEVDIPTERFPSFNHPSDHISLCVDFSY 505 >gi|148255197|ref|YP_001239782.1| exodeoxyribonuclease III [Bradyrhizobium sp. BTAi1] gi|146407370|gb|ABQ35876.1| Exodeoxyribonuclease III [Bradyrhizobium sp. BTAi1] Length = 256 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 73/303 (24%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN L + ++ DIV LQE+ A Sbjct: 1 MKIATFNINN----------------VRRRLPNLLSWLRSARPDIVCLQELKCAQA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +A+ + + L GA + R Sbjct: 41 ------EFPADAIATAGYGAVWQGQKTWNGVAILARKAEPVLIRTALPGAP---ADKEAR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + I + ++L + + Y + + L E + Sbjct: 92 YIEAAV-----RGIVIGCLYLPNGNPQPGPKFDYKLA------WFKRLHRHAADFIEHDL 140 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGD+N L +K + + Sbjct: 141 PVVLAGDYNVAPTPLDIYPTRSWNKDALIQPSSRAAFKALLDQGWCDAIRTLHPDQPMFT 200 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +D+ ++ L + D SDH P I Sbjct: 201 FWDYKRNRWPRDAGLRLDHLLLSPQLAPRLTKAGI-------DRAIRGEAGASDHAPAWI 253 Query: 301 DYD 303 Sbjct: 254 VLT 256 >gi|312898827|ref|ZP_07758215.1| exodeoxyribonuclease III [Megasphaera micronuciformis F0359] gi|310619989|gb|EFQ03561.1| exodeoxyribonuclease III [Megasphaera micronuciformis F0359] Length = 250 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 69/304 (22%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + K LDADI LQE A Sbjct: 1 MKFISWNVNGLRAVMKKGFP---------------EIFKELDADIFCLQETK-LQAGQIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ ++ ++ A+ + + + D R Sbjct: 45 MDLPGYEQYWN----------YADKKGYSGTAIFTRIKPLSVSYGMNIDEHDHEGRL--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + + + + + + + L Sbjct: 92 ------ITLEFEDFYFITCYTPNSQSELARLDYRMRWEDDFRNYVTELNR--------TK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + Sbjct: 138 PVIFCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKMTELLAAGFTDTWRYFYPDKEGVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ L + SDHCP+ Sbjct: 198 SWWSYRFKARQNNSGWRIDYFITSSALDSRLKEALI-----------YTNIEGSDHCPVG 246 Query: 300 IDYD 303 + + Sbjct: 247 LVIE 250 >gi|159487062|ref|XP_001701554.1| predicted protein [Chlamydomonas reinhardtii] gi|158271495|gb|EDO97312.1| predicted protein [Chlamydomonas reinhardtii] Length = 1288 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 46/335 (13%), Positives = 89/335 (26%), Gaps = 70/335 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQEMGSYNAV 80 V + S N+ LS + S + + DI+ + E+ N Sbjct: 908 TVTIGSLNVENLSPADP-----------PSKFARIADAVVKGLRSPDILGVAEVQDNNGP 956 Query: 81 AK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 T+ ++ + N +I + Sbjct: 957 TDTGVVAADVTLGLLISAIQAAGGPTY-VYLQINPVNNLDGGQPGGNIRQVLLYNPAVAT 1015 Query: 123 VLQ----------------------QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 + P + + +R+ + + + +NG+ ++V+ Sbjct: 1016 PANLPAGGSTDANAVISTATGQPQLKYSPGRLDPTNPAFQSSRKPLAVQLTVNGQPLFVI 1075 Query: 161 DIHLKSFCFLDSLENTY----------SPSCSLLSQQAQWLKDWITQKK--ESLVPFVIA 208 HL S L S S +QQA L +++Q E V+ Sbjct: 1076 VNHLNSKASLPSCGGDQPLFGRNQPPARSSEVQRAQQASILAGFVSQILALEEQSRVVVM 1135 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR---CNANKNLRNKIPIDYFVMDQN 265 GD N + + L + + N +D+ ++ + Sbjct: 1136 GDLNDFAGSSALGVLYASGLTNAYLLPEQSGLLRTPPNQRYSYNFEGNAQALDHILLSPS 1195 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 DD S G R SDH P+ + Sbjct: 1196 LVGGAEVGVLHVNSEFADDAAS-GTRFSDHDPLMV 1229 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 35/335 (10%), Positives = 83/335 (24%), Gaps = 68/335 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQEMGSYNAVA 81 V + S N+ LS + S + + D+V + E+ + Sbjct: 297 VTIGSLNVENLSPADP-----------PSKFARIANAVVKGLRSPDLVGVCEIQDNSGPT 345 Query: 82 KVF-----------------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 + N + +I + + Sbjct: 346 DDLVVDAAITITTLLAAIRDAGGPAYAYLQVNPENNQDGGEPGGNIRQILLYNPAVATAV 405 Query: 125 QQSYPLLGAKDSF----------------------SRAGNRRAVELLVEINGKKIWVLDI 162 + + +R+ + + + +NG+ ++V+ Sbjct: 406 GLPAACPSTPNEVVADANGKPQLKYSPGRLAPSNIAFQSSRKPLAVQLTVNGQPLFVIVN 465 Query: 163 HLKSFCFLDSLENTY----------SPSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGD 210 H S + S ++QA+ + ++Q ++ V+ GD Sbjct: 466 HFNSKASPPASGGDQPLFGRNQPPARSSEVQRAKQAEVVAGAVSQILALDAQARVVVMGD 525 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR---CNANKNLRNKIPIDYFVMDQNAY 267 N + + L + + N +D+ ++ + Sbjct: 526 LNDFAGSSALGVLYASGLTNAYLLPEQSGLLRTPPNQRYSYNFEGNAQALDHILLSPSLV 585 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 DD + R SDH P+ + Sbjct: 586 GGAEVGVLHVNSEFADDAPAST-RFSDHDPLLVRL 619 >gi|312899298|ref|ZP_07758633.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0470] gi|311293546|gb|EFQ72102.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0470] Length = 254 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 41/287 (14%), Positives = 84/287 (29%), Gaps = 48/287 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+ +E + W + Q D + +QE+ Sbjct: 1 MKIATYNVRVDTEYDQDWQWFFRK-------EAVCQLINFHDWSLCCIQEVRPNQVRDLK 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138 Y+T ++ + AI ++ V+ + Y L Sbjct: 54 A--------YTTFTCLSAEREGDGQGEGLAILYNEQKVKAIDTGYFWLSETPQQPSIHPE 105 Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A+ L + V+++HL + + ++ + L D I Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNANKNLRNK 254 Q P ++ GDFN + + + K N + P+ K Sbjct: 158 QY-----PTLLMGDFNAE-SEEEVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAEL 211 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + + + G+ SDH P+ + Sbjct: 212 EEIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248 >gi|94497212|ref|ZP_01303784.1| metal-dependent hydrolase [Sphingomonas sp. SKA58] gi|94423317|gb|EAT08346.1| metal-dependent hydrolase [Sphingomonas sp. SKA58] Length = 232 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 78/284 (27%), Gaps = 57/284 (20%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + +R+ S+NI + + + + +DADI+ LQE V Sbjct: 2 KTIRVASYNIRKAIGTDRRRIP-----------ERVLEVLGEVDADIIALQEADRRFGVR 50 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 S + + + + + H AI VRK+ + L Sbjct: 51 SAAIPPLLLDMLSGYKSVPLNIQTDSMGWHGNAILVRKEAEIGVHDVLHLPYL------- 103 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R A + + V +HL S L ++ Q + Sbjct: 104 EPRGATMAEITAKDITVRVFGMHL---------------DLSGLWRRRQAAAVIHAAAQG 148 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-NANKNLRNKIPIDY 259 +P ++ GD N + + C + R +D Sbjct: 149 ESLPTILMGDLNEWSA------------NGGCLADFGRHYSFAPCGRSFHARRPVARLDR 196 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + L E + ++ SDH PI ++ Sbjct: 197 IMHCSQLT--LKTCGVHE--------SAAARKASDHLPIWAEFS 230 >gi|124265241|ref|YP_001019245.1| hypothetical protein Mpe_A0048 [Methylibium petroleiphilum PM1] gi|124258016|gb|ABM93010.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 256 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 37/257 (14%), Positives = 77/257 (29%), Gaps = 40/257 (15%) Query: 54 YTLLRQYAKNLDADIVFLQEMG--SYNAVAKVFPKNTWCIFY----STERLINHSKRDSN 107 LR + + AD+VFLQE+ A++ + S + + Sbjct: 32 LHELRDAVRTVGADVVFLQEVQGTHERHTARLANWPAVPHYEFLADSIWPQFAYGRNAVY 91 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 H AV K + ++ + + R + ++++ G+ V + + Sbjct: 92 PHGHHGNAVLSKFPILRHENLDVSISG-----PERRGLLHCVLQLPGRSANVHAVCVHLG 146 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 S S+Q L + + ++ + P V+AGDFN + Sbjct: 147 L-----------QESHRSRQLALLCELVEREVPADAPLVVAGDFNDW------RRSAHRV 189 Query: 228 IDPNDSLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 ++ L + +D + A + + Sbjct: 190 LEHRAGLREVFLHSGGTSARTFPARFPMLQLDRIYVRNAA-----------VHAPMVLPR 238 Query: 287 SRGKRLSDHCPISIDYD 303 LSDH P++ + Sbjct: 239 RPWSHLSDHAPLAAEIS 255 >gi|332524529|ref|ZP_08400736.1| endonuclease/exonuclease/phosphatase [Rubrivivax benzoatilyticus JA2] gi|332107845|gb|EGJ09069.1| endonuclease/exonuclease/phosphatase [Rubrivivax benzoatilyticus JA2] Length = 251 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 35/286 (12%), Positives = 81/286 (28%), Gaps = 48/286 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY----- 77 +R+++ N + LR +++DAD+VFLQE+ Sbjct: 6 PIRVLTVNTHKGFTALNRRFV----------LDELRDAVRDVDADLVFLQEVHGTHCRQS 55 Query: 78 NAVAKVFPKNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + VA+ + + + A+ K V ++ + Sbjct: 56 DHVARWPQAPHYEFIADALWPQFAYGRNAVYPHGDHGNALLSKYPIVAHANHDVSVDGH- 114 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R + + + V + + + + +Q + L + + Sbjct: 115 ----EARGLLHCTLHRPADGMRVHAVCVHLGL-----------AEAHRRRQLEQLCELVR 159 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 ++ P V+AGDFN + + + + +R + Sbjct: 160 REVPDDAPLVVAGDFNDWRDRA---HPVLERGLGLSEVFVQAHGRSARTFPARWPLL--R 214 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + + + LSDH P++ + Sbjct: 215 LDRIYVRNTRGHRPLPLP-----------RRPWAHLSDHAPLAAEI 249 >gi|254293701|ref|YP_003059724.1| exodeoxyribonuclease III Xth [Hirschia baltica ATCC 49814] gi|254042232|gb|ACT59027.1| exodeoxyribonuclease III Xth [Hirschia baltica ATCC 49814] Length = 259 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 80/303 (26%), Gaps = 68/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N + + + KNL+ D+V QE+ + Sbjct: 1 MKIASWNVN----------------SVNARLPTVLEVLKNLELDVVCFQEIKCIDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + +A+ K+ Q +G R Sbjct: 41 ------NFPRLEIEDMGYNIITHGQKSYNGVAILSKHPIEDVQ----IGLPGDDEDDQAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + V I+L + + Y + L + Sbjct: 91 YIEA--LIMGETPVRVASIYLPNGNPFPGPKFDYKLA------WMDRLNARAKELLSYEE 142 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANK 249 V+AGD+N D + + +D+R + Sbjct: 143 AVVLAGDYNCIPRDEDCYDPAAWVDDALAQPETRGKFRELQWMGYTEGFAARDNRGHQYT 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ + A L S + SDH PI Sbjct: 203 FWDYQAGAWQKDNGIRIDHLLCSPQAADKLKSVSI-------YKDARGMTKPSDHVPIIG 255 Query: 301 DYD 303 +++ Sbjct: 256 EFE 258 >gi|28572478|ref|NP_789258.1| exodeoxyribonuclease III [Tropheryma whipplei TW08/27] gi|28410610|emb|CAD66996.1| exodeoxyribonuclease III [Tropheryma whipplei TW08/27] Length = 279 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 72/305 (23%), Gaps = 61/305 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + + KN D+ LQE Sbjct: 1 MRVGTWNVN----------------SIRARLERVLAWLKNECIDVAALQETKVRTG---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + +A+ + R G Sbjct: 41 ------DFPVDAFRDAGYYSEAHGLRGFEGVAIVSRFPIRRVTVNIPRAPGFLSDRWGTD 94 Query: 144 RAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE-- 200 E + I + +++ + + S Y + + L + Sbjct: 95 IPQEARAISATTGGIRLYSLYVPNGREVGSPHFEYKLA------WLKALASHVRTVLRRT 148 Query: 201 SLVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 +P ++ GDFN I G + ++ I Sbjct: 149 PGIPLMLVGDFNIVTCEQDTADPDFQLPNDITCSGPEREAFQAILDTGMFDLIRPFAPIG 208 Query: 245 CNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + R + ID+ + + + I G SDH P+ Sbjct: 209 FTSWSYQRQRFQNNQGLRIDFMLGSDSVQRRTIWGEID----RVQRRHLFGLTPSDHAPL 264 Query: 299 SIDYD 303 D Sbjct: 265 VSVID 269 >gi|312140778|ref|YP_004008114.1| exodeoxyribonuclease iii [Rhodococcus equi 103S] gi|325675582|ref|ZP_08155266.1| exodeoxyribonuclease III [Rhodococcus equi ATCC 33707] gi|311890117|emb|CBH49435.1| exodeoxyribonuclease III [Rhodococcus equi 103S] gi|325553553|gb|EGD23231.1| exodeoxyribonuclease III [Rhodococcus equi ATCC 33707] Length = 275 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 31/278 (11%), Positives = 68/278 (24%), Gaps = 54/278 (19%) Query: 52 SDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 + L + AD+V LQE + P ++ + Sbjct: 24 AARKGLIDWLAGSQADVVCLQETRASDKQLHETLAPALDQGWHVASAE--------PSAK 75 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 +AV + + +G D R +E + + V ++L + Sbjct: 76 GRNGVAVLSRRPADAVR----IGFGDDEFADAGRY-----IEADFDALTVGSLYLPTG-- 124 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------ 217 ++ ++ A L + ++ GD+N Sbjct: 125 -EAETPKQEQKERFMASFAAHLSASAEAAVAAGRDVLVCGDWNIAHTERDIKNWKGNVKK 183 Query: 218 ----LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQ 264 G D + + + + IDY + Sbjct: 184 SGFLPGERDWVGALLAGGAWVDVVRELHPDVDGPYSWWSYRGKAFDTDAGWRIDYHLTTP 243 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + +R SDH P+++ + Sbjct: 244 GLAARAK-------EARVERAATYAERWSDHAPVTVQF 274 >gi|282911587|ref|ZP_06319387.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus WBG10049] gi|282324596|gb|EFB54908.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus WBG10049] gi|312437570|gb|ADQ76641.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus TCH60] Length = 280 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 81/276 (29%), Gaps = 28/276 (10%) Query: 45 NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE-------- 96 + + +D Y K + D+V E A K+ Y T Sbjct: 10 HWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQSG 67 Query: 97 RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK 156 S +A+ K + + F N+ V +E NGK Sbjct: 68 WDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNGKN 126 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKI 215 + V+ H +S DS + ++Q + + D++ + I GD N Sbjct: 127 VHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNVN- 181 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK-- 268 D K ++ ND L N +DY D++ + Sbjct: 182 KGTEEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQPK 241 Query: 269 FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300 L+ E +E D + SDH PI Sbjct: 242 QLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 277 >gi|188588613|ref|YP_001921245.1| exodeoxyribonuclease III [Clostridium botulinum E3 str. Alaska E43] gi|188498894|gb|ACD52030.1| exodeoxyribonuclease III [Clostridium botulinum E3 str. Alaska E43] Length = 251 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 33/300 (11%), Positives = 80/300 (26%), Gaps = 78/300 (26%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +L+SWN+N L K +ADI +QE + Sbjct: 3 KLISWNVNGLRACVKKGF---------------LDILKESNADIFCIQESKLQEGQIDLN 47 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + + + + ++ AV K + LG R Sbjct: 48 LEEYYDYW-----------NYAEKKGYSGTAVFSKEKPLNIS----LGIGIEEHDKEGR- 91 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ + ++ ++++++ + + + + L Sbjct: 92 ----VLTLEFEEFYLVNVYTPNSQQKLARIDYRMAWENDFRDYLNELNK--------DKS 139 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GD N + + + + + + + A Sbjct: 140 VIVCGDLNVAHKEIDLKNPKNNRNNAGFSDEEREKFDELLKSGFIDTYRYFYPDKEGAYS 199 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF++ ++ L+ + + SDHCP+ + Sbjct: 200 WWSYRFNARANNAGWRIDYFLVSKDFEDRLVDANIHTQI-----------EGSDHCPVEL 248 >gi|158297124|ref|XP_001689028.1| AGAP008053-PA [Anopheles gambiae str. PEST] gi|157015043|gb|EDO63591.1| AGAP008053-PA [Anopheles gambiae str. PEST] Length = 404 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 38/296 (12%), Positives = 78/296 (26%), Gaps = 41/296 (13%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ +++ NI + + + + + DIV LQE+ S + Sbjct: 2 ELSILTLNIWGIPYVSKDR---------ETRVKAIGDVLASGNYDIVSLQEVWSDSD--- 49 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVRVLQQSYPL-----LGAKDS 136 + + + + + +A+ + V + + Sbjct: 50 ------YQYLKQRVENVLPFCHYFYSGVVGSGLAILSRYPIVAAFFHAWSVNGYIHRIQH 103 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 G + + +N + + V HL + + QA +I Sbjct: 104 GDWFGGKGVGMAKISVNDQLVHVYVAHLHA-----EYNRQCDDYMAHRVIQAHDTAQFIE 158 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDF--WKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + V V+AGD N + L K D D + C+ N Sbjct: 159 STRGQSVLQVLAGDLNTEPGDLAYRVLVTSSKLKDSYDRKSIGSGVGTNECHTNSYTDPL 218 Query: 255 I--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IDY + L + + + SDH + Sbjct: 219 AAKQLPNGKRIDYILYR--IGDHYEGRLLEHRLPLPERVPGQTFSYSDHEAVYAKL 272 >gi|73976315|ref|XP_865627.1| PREDICTED: hypothetical protein XP_860534 isoform 3 [Canis familiaris] Length = 569 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 38/296 (12%), Positives = 84/296 (28%), Gaps = 35/296 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+ S V N R TLL K ++ +QE+ A+ K Sbjct: 261 LRLATWNVQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 311 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG----------- 132 + I + + +KN S L+ Sbjct: 312 CTELNQPILPNIRKWKGPRGCWKAVVAEMPSTQLQKNPSPSGHSMDLIPTALTCEITGRR 371 Query: 133 --AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 +++ + + + ++++HL + + + S S Sbjct: 372 ALPAGAWTCPPGPAPWGCRIRVGSNDLTLVNLHLATLVHPGGENPSRNHSDSHR---LAS 428 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + + + ++ GDF + + + + P + + KN Sbjct: 429 FVQTLQETLKGEKDMIVLGDFGQGPDSSDYD-----ILRKEKFYHLVPAHTFTNI-STKN 482 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302 + +D + ++ K I S+HCP+ ++ Sbjct: 483 PQGSKSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEF 538 >gi|18310156|ref|NP_562090.1| exodeoxyribonuclease III [Clostridium perfringens str. 13] gi|110802988|ref|YP_698514.1| exodeoxyribonuclease III [Clostridium perfringens SM101] gi|18144835|dbj|BAB80880.1| 3'-exo-deoxyribonuclease [Clostridium perfringens str. 13] gi|110683489|gb|ABG86859.1| exodeoxyribonuclease III [Clostridium perfringens SM101] Length = 250 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 39/299 (13%), Positives = 75/299 (25%), Gaps = 78/299 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L Y K+ DADI LQE Sbjct: 1 MKLISWNVNGLRACVKKGF---------------LDYFKSEDADIFCLQETKLQEG-QID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + G R Sbjct: 45 LDLEGYHQYWNYAEKKGY----------SGTAIFTKKEPLNV----YYGINMEHHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + L S Sbjct: 91 -----VITLEFEDFFMVTVYTPNSQSELARLEYRMEWEDDFRNYLLEL--------SSKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GD N D + T+ + + F Sbjct: 138 GVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDKFSTLLSSGFIDTFRYFNPDLEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF++ N + + S + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEASIDTEIL-----------GSDHCPV 245 >gi|53715634|ref|YP_101626.1| hypothetical protein BF4354 [Bacteroides fragilis YCH46] gi|52218499|dbj|BAD51092.1| conserved hypothetical protein [Bacteroides fragilis YCH46] Length = 608 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 89/305 (29%), Gaps = 67/305 (21%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +RK +L L L +A +RL+++N+ + +G+ +Y + Sbjct: 1 MRKLLLLLFSALFVLSAQAEDVLRLMTYNVRNANGMDGIC-----------NYQRVANVI 49 Query: 62 KNLDADIVFLQEMGSYNAVA---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N DIV +QE+ S A + V + + I + Sbjct: 50 NNARPDIVAIQELDSMTARSNRTDVLKELAERTQLHPCFAPAID----YDGGKYGIGILS 105 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K + Q++ L G R R + + HL Sbjct: 106 KETPLRVQTFALPG------REEARTLLVAEFP----EYVFACTHLSLTEED-------- 147 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--FWKTIDPNDSLIR 236 + + L+ + ++ PF +AGDFN + D ++ + Sbjct: 148 --------RMKSLEILKSVAADTRKPFFLAGDFNSDADSGFIKDLKSTFQILS------- 192 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 K +DY + + + S I SDH Sbjct: 193 ---NPKQPTYPAS--EPKETLDYLIALKQETPTFVVNSARVI---------DEPLASDHR 238 Query: 297 PISID 301 P+ ++ Sbjct: 239 PLLVE 243 >gi|332705691|ref|ZP_08425767.1| putative extracellular nuclease [Lyngbya majuscula 3L] gi|332355483|gb|EGJ34947.1| putative extracellular nuclease [Lyngbya majuscula 3L] Length = 328 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 34/322 (10%), Positives = 91/322 (28%), Gaps = 40/322 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSYNA 79 + ++ ++N+ L + + K +T + + K + ADIV QE+ A Sbjct: 4 NRFKVGTFNLCNLVLPDVLYYRKKIYTQTEYALKTTWIAEQLKKMKADIVGFQEVFHKEA 63 Query: 80 VAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + + + + + + + D Sbjct: 64 LQQALAQSQVYDNATTVFANPTGKSPVVALTSRFPVLEYNVIKDFPTTACLDIQGTDIPL 123 Query: 139 RAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD---- 193 + +R +E ++++ V IHLKS + + QA+ L Sbjct: 124 KRFSRPVLEAHLKLSDTIDCTVFVIHLKSKRPIIPDGVDRNDPIEQAKGQARSLILRAAE 183 Query: 194 -------WITQKKESLVPFVIAGDFNRKI---------NYLGNNDDFWKTIDPNDSLIRF 237 + + + P ++ GD N +++ ++ + Sbjct: 184 ATALRVILMDKLQHRDHPVIVMGDVNDSGLAITSQIVSGEPPLRKLWFQQKQIIWDVLLY 243 Query: 238 -------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + + + +D+ ++ Q + + + + Sbjct: 244 YVKDIQARQNYGDFYYTHIHNGHHESLDHILVSQEFVVQNPKRIGRVGYVSLFNDHLIDE 303 Query: 291 RL---------SDHCPISIDYD 303 L SDH + + + Sbjct: 304 TLSEEKIETWQSDHGQVVVSIE 325 >gi|301605741|ref|XP_002932509.1| PREDICTED: deoxyribonuclease-1-like [Xenopus (Silurana) tropicalis] Length = 282 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 93/308 (30%), Gaps = 39/308 (12%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 +L + + S +++ ++NI +S + ++L + Sbjct: 1 MLLLICSLTLTLCLSDISALKIGAFNIRAFG---------DSKMKNPEVSSVLMKILPRY 51 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA------IAVRK 118 DIV +QE+ K S +S S+ A R Sbjct: 52 --DIVIIQEVRD---ADHSAVKLLMQRLNSLNTGPVYSHVISDTLGRDAYKEQYLFIYRN 106 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTY 177 V V + + +R + G + + I L S Sbjct: 107 DKVTVEDSYHYHDHCMYTGKDTFSREPFVVRFNAEGTVVEDFVLIPLHSAP--------- 157 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + + +D + + + + GDFN +Y+ ++D + N+ Sbjct: 158 KDAVREIDALYDVYEDIMEKWQTDN--MIFLGDFNAGCSYVTDSDWDNIRLRTNEQFAWL 215 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQ-NAYKFLIQESFSEILYNEDDIKSRGKRL--SD 294 + N D V+ + + ++Q+S + + ++ + L SD Sbjct: 216 IPDATDTTVGNTCCAY----DRIVVSGADLQEAIVQDSVKVFDFQKKYKLTQEEALAVSD 271 Query: 295 HCPISIDY 302 H P+ ++ Sbjct: 272 HFPVEMEL 279 >gi|56695135|ref|YP_165482.1| hypothetical protein SPO0213 [Ruegeria pomeroyi DSS-3] gi|56676872|gb|AAV93538.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3] Length = 357 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 45/364 (12%), Positives = 96/364 (26%), Gaps = 70/364 (19%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 MIR LA + + A+ A+ +R+ ++N LS + + ++ + + Sbjct: 1 MIR---LAALVLCLLPVAAAAEVLRVATFNTE-LSRKGPGLMLRDIAGGRDTQVAAVVSV 56 Query: 61 AKNLDADIVFLQ------EMGSYNAVAKVFPKNTWCIFYSTERLINHSK----------- 103 + DI+ LQ E + +A+A W + + N + Sbjct: 57 IASARPDILALQGLDWDHEGRALDALAAQLAAAGWEMAHIFAAQPNSGRATDLDLDGDRR 116 Query: 104 --------RDSNNDIHTAIAVRKKNVR----------VLQQSYPLLGAKDSFSRAGNRRA 145 IA+ ++ + + P +S A A Sbjct: 117 IGGPGDAQGYGRFTGQGGIAILSRHPIAQAEIQDFSALRWRDLPGATLPESGGHAFPSEA 176 Query: 146 V------------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + ++ + ++ +L F + + L Sbjct: 177 AQAAQRLSSTGHWLVPIDTDMGRMVLLTYQAGPPVFDGPEDRNGLRNRDETRFWQLLLDG 236 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK---- 249 + +PFV+AG N + + + L E A Sbjct: 237 VVGAM--PDLPFVLAGGANLDPQDGEGYRGTIRALLADPRLQDPAPESSGAARAGPQGHA 294 Query: 250 ---------NLR-NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DY + + + S +D S H + Sbjct: 295 GPDARDTVDWPGIGRFRVDYVLPS---THWRVVGSGVVWPAPDDPSAGPVSEASRHRLVW 351 Query: 300 IDYD 303 +D Sbjct: 352 VDLS 355 >gi|300934548|ref|ZP_07149804.1| putative extracellular nuclease [Corynebacterium resistens DSM 45100] Length = 938 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 41/333 (12%), Positives = 83/333 (24%), Gaps = 61/333 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWK----------------------NSVKRTTSDYTLLR 58 + L S+N+ G S K + Sbjct: 539 GGDLSLASFNVLNYFTDLGSDEDGCNAYNDREGNPVTAKKCTVRGAFSKKSFEDQQAKIV 598 Query: 59 QYAKNLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 L+ ++ L+E+ + ++ K+ + + I Sbjct: 599 AAINKLNVSVLGLEEIENSAKFGHDRDESLRKLVAALNAAGGNWKYVPSPKTLPGDEDVI 658 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC-- 168 TA V + S L S R + + K + + Sbjct: 659 RTAFIYNPDKVSPVGDSRILDHEAFSGIA---RAPLAQEFKAAQGKENFVAVVNHYKSKG 715 Query: 169 ----FLDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLGNNDD 223 + + L S ++ L W+ ++E P + GDFN Sbjct: 716 SVARGDVDTGDGQGNNAKLRSNMSRQLLTWLNAQQEWKDKPQFVMGDFNAYAKEDAI--- 772 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + I+ + + +D+ + + A K + +I +E Sbjct: 773 --RVIEEGGFTNLDTHFDAGL--SYQFGGRLGSLDHVLANAAAMKLVTGADVWDINSDEA 828 Query: 284 DIKSRGK--------------RLSDHCPISIDY 302 + R SDH PI + + Sbjct: 829 VNFEYSRRNYNVVDFFANDVFRASDHDPIKVGF 861 >gi|149728780|ref|XP_001491101.1| PREDICTED: similar to Deoxyribonuclease gamma precursor (DNase gamma) (Deoxyribonuclease I-like 3) (DNase I homolog protein DHP2) (Liver and spleen DNase) (LS-DNase) (LSD) [Equus caballus] Length = 380 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 40/294 (13%), Positives = 94/294 (31%), Gaps = 34/294 (11%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + A +R+ S+N+ + E + + ++ + K DI+ L E+ Sbjct: 14 SVHSALGLRICSFNVRSFGESKKENRNT---------MDVIVKVIKRC--DIILLMEIKD 62 Query: 77 YN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 N + + N+ + + R++ + + A ++K V V ++ Y Sbjct: 63 SNNMICPTLMEKLNGNSRRGITYNYVISSRLGRNTYKEQY-AFLYKEKLVSV-KKRYLYH 120 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + + +R + + + I S + + A Sbjct: 121 DYQAGDADVFSREPFVIWFQSPYTAVKDFVIVPLHTTPDT--------SVKEIDELADVY 172 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 D + K F+ GDFN +Y+ + + + +++ + Sbjct: 173 VDVKRRWKAEN--FIFMGDFNAGCSYVPKKAWKNIRLRTDLGFVWLIGDEEDTTVKSST- 229 Query: 252 RNKIPIDYFVMDQ-NAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 K D V+ ++ +S S + + + + L SDH P+ Sbjct: 230 --KCAYDRIVLRGREIVSSVVPKSNSVFNFQKSYALTEEEALGVSDHFPVEFKL 281 >gi|15642616|ref|NP_232249.1| extracellular nuclease-related protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121588108|ref|ZP_01677856.1| hypothetical protein VC274080_2619 [Vibrio cholerae 2740-80] gi|153819030|ref|ZP_01971697.1| hypothetical protein A5C_2696 [Vibrio cholerae NCTC 8457] gi|153821574|ref|ZP_01974241.1| hypothetical protein A5E_2936 [Vibrio cholerae B33] gi|229507327|ref|ZP_04396832.1| extracellular nuclease-related protein [Vibrio cholerae BX 330286] gi|229509749|ref|ZP_04399230.1| extracellular nuclease-related protein [Vibrio cholerae B33] gi|229516874|ref|ZP_04406320.1| extracellular nuclease-related protein [Vibrio cholerae RC9] gi|229606833|ref|YP_002877481.1| extracellular nuclease-related protein [Vibrio cholerae MJ-1236] gi|254851160|ref|ZP_05240510.1| extracellular nuclease-related protein [Vibrio cholerae MO10] gi|255744412|ref|ZP_05418364.1| extracellular nuclease-related protein [Vibrio cholera CIRS 101] gi|262158475|ref|ZP_06029590.1| extracellular nuclease-related protein [Vibrio cholerae INDRE 91/1] gi|9657210|gb|AAF95762.1| extracellular nuclease-related protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547651|gb|EAX57748.1| hypothetical protein VC274080_2619 [Vibrio cholerae 2740-80] gi|126510411|gb|EAZ73005.1| hypothetical protein A5C_2696 [Vibrio cholerae NCTC 8457] gi|126520959|gb|EAZ78182.1| hypothetical protein A5E_2936 [Vibrio cholerae B33] gi|229345937|gb|EEO10909.1| extracellular nuclease-related protein [Vibrio cholerae RC9] gi|229353223|gb|EEO18162.1| extracellular nuclease-related protein [Vibrio cholerae B33] gi|229354832|gb|EEO19753.1| extracellular nuclease-related protein [Vibrio cholerae BX 330286] gi|229369488|gb|ACQ59911.1| extracellular nuclease-related protein [Vibrio cholerae MJ-1236] gi|254846865|gb|EET25279.1| extracellular nuclease-related protein [Vibrio cholerae MO10] gi|255737937|gb|EET93330.1| extracellular nuclease-related protein [Vibrio cholera CIRS 101] gi|262029636|gb|EEY48285.1| extracellular nuclease-related protein [Vibrio cholerae INDRE 91/1] Length = 869 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 48/373 (12%), Positives = 89/373 (23%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R ++ + LDADIV L E Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116 + + S R D I T + Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162 R K V++ Q + ++ + R + ++ G KI V Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652 Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211 H KS + + L Q + VI GD Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712 Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243 N D I + + K Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGLEQFGDAGAEIKHSYGYLNAVAMKHP 772 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290 + +D+ ++ + ++ + I E + Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 833 RASDHDPAVLELN 845 >gi|299142059|ref|ZP_07035193.1| AP endonuclease domain protein [Prevotella oris C735] gi|298576521|gb|EFI48393.1| AP endonuclease domain protein [Prevotella oris C735] Length = 368 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 85/303 (28%), Gaps = 70/303 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++++S+N+ + + E + K + +Y + DI+ LQE + Sbjct: 104 DAIKVMSYNVWSFAGWERHADGKFP----------ILEYIREQQPDILCLQEAMTNEIGQ 153 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 I+ + + + IA+ V + + Sbjct: 154 ARVDSVLNKIYAYKDTMK-------FSPSSDCIALYSHYPIVSHERIVYPSRGNLSG--- 203 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------- 178 ++I + V++ HL++ + + + Sbjct: 204 -----AFEIKIGNDTVIVVNNHLETTGLSNEDKREFKSMVKGNLLTSDAKQASYRLIDKL 258 Query: 179 -PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + + + QA + +I++ S ++ GDFN + F Sbjct: 259 GEASAKRAVQADAVARYISKH--SDRSMIVCGDFNDSPISYARHTI------AKGLTDCF 310 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + N + ID+ + ++ + D SDH P Sbjct: 311 IATGNGLGVSYHNGGMYVRIDHIMCSKD---------WQPYGCKVDRSIGE----SDHYP 357 Query: 298 ISI 300 I Sbjct: 358 ILC 360 >gi|295838281|ref|ZP_06825214.1| exodeoxyribonuclease III [Streptomyces sp. SPB74] gi|197698261|gb|EDY45194.1| exodeoxyribonuclease III [Streptomyces sp. SPB74] Length = 274 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 27/274 (9%), Positives = 73/274 (26%), Gaps = 58/274 (21%) Query: 59 QYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 ++ AD++ LQE+ ++ V W ++ + + +++ Sbjct: 29 EWLAGTSADVLCLQEVRAEAHQLPEGVARPEGWFSLHAP----------AADKGRAGVSL 78 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + ++ D R + ++ G + V ++L S + Sbjct: 79 YTRREPDRVRTGFGSAEFDGSGR-------YVEADLPG--VTVASLYLPSGEVGTERQEQ 129 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGN 220 + L+ ++ GD+N Sbjct: 130 KYRFMDEFLAYLKELRGRA---AAEGREVLVCGDWNIAHTEADLKNWRGNRKNAGFLPEE 186 Query: 221 NDDFWKTID--PNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKF 269 + + +D + + + IDY + + Sbjct: 187 REWLSRVLDPGDGGYVDVVRGQYPGTEGPYSWWSYRGRAFDNDTGWRIDYHMASAGLAER 246 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + + +R SDH P+++ Y+ Sbjct: 247 AVKAEV-------ERAATHAERWSDHAPVTVTYE 273 >gi|268592513|ref|ZP_06126734.1| endonuclease/exonuclease/phosphatase family protein [Providencia rettgeri DSM 1131] gi|291311920|gb|EFE52373.1| endonuclease/exonuclease/phosphatase family protein [Providencia rettgeri DSM 1131] Length = 297 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 37/288 (12%), Positives = 84/288 (29%), Gaps = 49/288 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NI KN + S+ L + +DAD++ L E+ + A +K Sbjct: 47 IKVATYNI-----------GKNELSPDVSNLDELNKAIAKIDADVIVLTEIDNKTARSKK 95 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + K + + + K + L A R Sbjct: 96 VHQLEEIAKANKMDFAF-GKALDFDGGEYGVGILSKYKIDKSKVINLPSG-----DAEQR 149 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + G ++ + + ++ Q + + D ++ Sbjct: 150 VVLISQISKPGFDAPIIVMGTHL---------DWQKDPTIRIGQVRHILDASIGDTDTGF 200 Query: 204 PFV------IAGDFNRKINYLGNN--DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + +AGDFN N W ++ + + I Sbjct: 201 DNIAASIKILAGDFNSTANEQPIQEIRYMWNPVELKGI----------DYRSWPAVNPAI 250 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID+ + + + D + + +SDH PI + + Sbjct: 251 DIDHIFTFKGQVWDVKKMEI-----PTDSKEFQWSSVSDHLPIIAELE 293 >gi|288959479|ref|YP_003449820.1| exodeoxyribonuclease III [Azospirillum sp. B510] gi|288911787|dbj|BAI73276.1| exodeoxyribonuclease III [Azospirillum sp. B510] Length = 264 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 81/306 (26%), Gaps = 69/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WNIN++ + + L +R D++ LQE +A + Sbjct: 1 MRIATWNINSVRMRLDLLLRLMEEER----------------PDVICLQETKVVDADFPL 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P ++ + +A+ + G +D R Sbjct: 45 APLAERGYVHA---------HIHGMKSYNGVAILSRLPFSSHDVQHWCGKQDC------R 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A+ G ++ + I D + + + Q + W+ ++ Sbjct: 90 HALAR--LPGGIELHCVYIPA----GGDIPDPAVNDKFAHKLQFLDEMTRWLGTERTPDR 143 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P V+ GD N + + + + Sbjct: 144 PMVLVGDLNIAPLEQDVWSHKELLSVVSHTPVEVERLAAMQASAGWIDAMRRFVPPEEKL 203 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + L + D + + SDH P Sbjct: 204 YTWWSYRAKDWAASNRGRRLDHIWVTPPLEGAL--AGIKVLR----DARGWDPKPSDHVP 257 Query: 298 ISIDYD 303 + +D D Sbjct: 258 VIVDLD 263 >gi|156362086|ref|XP_001625612.1| predicted protein [Nematostella vectensis] gi|156212454|gb|EDO33512.1| predicted protein [Nematostella vectensis] Length = 257 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 31/305 (10%), Positives = 74/305 (24%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 ++ SWN+N L + + D D+ +QE + + K Sbjct: 5 FKITSWNVNGLRAWLKNNSK---------------SFVSKEDPDVFCIQETKCALADIPK 49 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + ++++ + + + + K + G + Sbjct: 50 EAKLAGYHCYWNSAEQKGY----------SGVGLCSKKEPIKVS----YGMGNKEHDKEG 95 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R ++ + ++ ++ + + L + Sbjct: 96 R-----VITAEYEDFHLVTSYVPNSGRGLPRLGYRQQWNKDFLSYLKKLDEI-------- 142 Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N + T+ F + + +A Sbjct: 143 KPVILCGDLNVAHKDIDLANPKTNTRTAGFTKEERADFTTLLGEGFKDTFRELYPDKKSA 202 Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +DYFV+ + + SDHCP+ Sbjct: 203 YTFWSYMGGARAKNVGWRLDYFVVSDRLVPKVCDSIIRSRV-----------MGSDHCPL 251 Query: 299 SIDYD 303 S+ Sbjct: 252 SLLLS 256 >gi|111019171|ref|YP_702143.1| DNA-(apurinic or apyrimidinic site) lyase [Rhodococcus jostii RHA1] gi|110818701|gb|ABG93985.1| probable DNA-(apurinic or apyrimidinic site) lyase [Rhodococcus jostii RHA1] Length = 270 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 31/301 (10%), Positives = 69/301 (22%), Gaps = 58/301 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 VR+ +WN+N + + + + D D++ +QE + Sbjct: 4 VRIATWNVN----------------SVRARTDRILDWLQRSDVDVLAMQETKCKDE---- 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y R + + +A+ + Q Sbjct: 44 ------QFPYERFRELGYEVAHVGLSQWNGVAIASRVGLEDVQIGFEDQPGFHKDPEVAP 97 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ-------------QAQW 190 + + + +++ + L TY Q Sbjct: 98 AQEARAIGATCNGVRIWSLYVPNGRELADPHYTYKLDWLAKLHTDAVGWLGQNPDAQIAL 157 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + DW + F K + + ++ + Sbjct: 158 VGDW--NVAPTDEDVWDPALFEGKTHTSAPEREAFQAFVESGFADVVRPHTPGP-GVYTY 214 Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 ID+ + + + D + +GK SDH P+ +D Sbjct: 215 WDYTQLRFPKKQGMRIDFVLGSPALAGRVDKAEI-------DRNERKGKGASDHAPVIVD 267 Query: 302 Y 302 Sbjct: 268 L 268 >gi|19704226|ref|NP_603788.1| DNAse I homologous protein DHP2 precursor [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328862|ref|ZP_06871373.1| DNAse I family protein DHP2 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19714452|gb|AAL95087.1| DNAse I homologous protein DHP2 precursor [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296153983|gb|EFG94790.1| DNAse I family protein DHP2 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 279 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 94/305 (30%), Gaps = 37/305 (12%) Query: 2 IRKYVLALVFFLVPCTA--SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 RK +L +F L C + S A + + S+NI L D + Sbjct: 3 KRKLLLLTIFALFFCLSILSSADEAYIASFNILRLGA-------------AKKDMPQTAK 49 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRK 118 + DIV L E+ + + V ++ + + I+ S+ + A +K Sbjct: 50 ILQGF--DIVGLVEVINRDGVEELVDELNKASDEKWDYHISPFGVGSSKYKEYFAYVYKK 107 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 V+ ++ K S R +I + +H Sbjct: 108 DKVKFIKSEGFYKNGKSSL----LREPYGATFQIENFDFTFVLVHTIYG--------NNE 155 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + + D+ + + IAGDFN + +K D I Sbjct: 156 SQRKAENFKMVDVYDYFQDRDKKENDIFIAGDFNL-YALDESFKPLYKHSDKITYAIDPA 214 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + N D F Q + S + ++ D+ K + +SDH P+ Sbjct: 215 IKTTIGTKGRANSY-----DNFFFSQKYSQEFTGSS-GALDFSGDNPKQMREIISDHIPV 268 Query: 299 SIDYD 303 I + Sbjct: 269 FIVVE 273 >gi|332291511|ref|YP_004430120.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus 4H-3-7-5] gi|332169597|gb|AEE18852.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus 4H-3-7-5] Length = 327 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 35/316 (11%), Positives = 85/316 (26%), Gaps = 49/316 (15%) Query: 26 LVSWNINTLSEQ-------EGVSLWKNSVKRTT----SDYTLLRQYAKNLD-------AD 67 + +N+ L + + + + L N+ Sbjct: 19 VGFYNLENLFDTTNNPETLDDDFTPNGFKEWNSYKFNKKIAKLSTVISNIGKEDTKTSPS 78 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK-KNVRVLQQ 126 ++ + E+ + + + + + + I A+ +K + Sbjct: 79 LLGVAEVENRSVLESLIATDNLKDEGYDIVHYDSPDE---RGIDVALLYKKADFKVTASE 135 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 L + R R + + E+ G + +L H S ++ + + + ++ Sbjct: 136 PITLYLEAEEGGRDYTRDILYVQGELLGNPVHILVNHWPSRRSGENETSQKRITAAQRNR 195 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + + + ++ V +I GDFN + ++ KT N L + + S Sbjct: 196 EV--IDKLMN--EDHKVKIIIMGDFNDGPHSESVKNNLVKTEFYNPMLYLGTRYEGSLNY 251 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQ-------------------ESFSEILYNEDDIKS 287 + D + N + F + K Sbjct: 252 RFEWFIF----DQIIFSNNFVQLHENTLLYEKSDIYNDFFLTEYEGKFKGTPFRTYAGKR 307 Query: 288 RGKRLSDHCPISIDYD 303 SDH P+ Sbjct: 308 YLGGYSDHFPVYSILS 323 >gi|220904154|ref|YP_002479466.1| exodeoxyribonuclease III Xth [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868453|gb|ACL48788.1| exodeoxyribonuclease III Xth [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 268 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 80/307 (26%), Gaps = 69/307 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +LVSWN+N L + W + + DA +V LQE K Sbjct: 3 FKLVSWNVNGLRAVSAKADW---------------DWFAHSDAQVVALQE-------TKA 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ + + ++ +AV + + + R Sbjct: 41 HPEQLDEDVREPAGWESRWASSTVKKGYSGVAVFSRVPFLSWSAELPQPEFQGEGRL--- 97 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLD-SLENTYSPSCSLLSQQAQWLKDWITQKK--E 200 + + + + + + + + + + + + ++ + Sbjct: 98 ------LHLEYPDFHFFNGYFPNGGAEELDENGKPTGNFKRVPYKMAYFEAFLAYAEECR 151 Query: 201 SLVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 P V+ GDFN +L F + F Sbjct: 152 KSKPIVVCGDFNIAHRPIDLARPKPNEKCTGFLPEERAFLDRFTALGYVDTFRHVHGDAP 211 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + K IDYF + Q + +Y SDHC Sbjct: 212 DNYSWWSYKTRARAKNVGWRIDYFFVSQELAPAIRDAWIENDVY-----------GSDHC 260 Query: 297 PISIDYD 303 P+ + + Sbjct: 261 PVGLSLE 267 >gi|148654820|ref|YP_001275025.1| endonuclease/exonuclease/phosphatase [Roseiflexus sp. RS-1] gi|148566930|gb|ABQ89075.1| Endonuclease/exonuclease/phosphatase [Roseiflexus sp. RS-1] Length = 348 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 31/293 (10%), Positives = 68/293 (23%), Gaps = 62/293 (21%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +S R++++NIN + + + DI+ LQE Sbjct: 105 FSSQGAPFRVMTFNINGGN----------------ERTDRVLAAIRAAQPDIIALQE--- 145 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + + T + + + A Sbjct: 146 -------LNPSIAAALERDLKNEYPYQLLDPQWGVTGMGIISRFPLR-------PLAARL 191 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + ++ G+ I +L+ H + +QA+ + ++ Sbjct: 192 PGDRWIGAPQAVEIDTPGQTITLLNFHAIPPVGPSEYMTA---AIGERERQAEAINAFVQ 248 Query: 197 QKKESLVPFVIAGDFNRKINYLGNN-------DDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + P V+AGD N + + D W+ Sbjct: 249 AQ---RTPVVVAGDMNATPFHRAYHILEHGALSDVWRECGSGAGFTWPGNRTIGGVPVLP 305 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ + +SDH + Sbjct: 306 WF---VRIDHLFTTNGIVCLDASVGPWD-------------GVSDHRAVVATL 342 >gi|270290148|ref|ZP_06196374.1| exodeoxyribonuclease III [Pediococcus acidilactici 7_4] gi|270281685|gb|EFA27517.1| exodeoxyribonuclease III [Pediococcus acidilactici 7_4] Length = 251 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 75/304 (24%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L LDADI +QE Sbjct: 1 MKLISWNVNGLRAAVKHGF---------------LDVFNELDADIFCVQETKLQEG-QID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + AV K V + D R Sbjct: 45 LDLPGYHQYWNYAEKKGY----------SGTAVFTKREPVAVSYGLGIPEFDQEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++ +++ + + + + L D Sbjct: 91 -----VITLEYEEFFLVTCYTPNSQPELRRLDYRMNWDDAFRAYVKQLAD--------TK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + + + Sbjct: 138 PVIFCGDLNVAHEEIDLKNDRTNHHNAGFTDEERQKFTELLQSGFTDTYRYFYPDKEGVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV Q K L ++ SDHCPI Sbjct: 198 SWWSYRFNARANNAGWRIDYFVTSQALDKQLADAKIHTEIF-----------GSDHCPIE 246 Query: 300 IDYD 303 +D + Sbjct: 247 LDLN 250 >gi|257453584|ref|ZP_05618874.1| endonuclease/exonuclease/phosphatase [Enhydrobacter aerosaccus SK60] gi|257449042|gb|EEV23995.1| endonuclease/exonuclease/phosphatase [Enhydrobacter aerosaccus SK60] Length = 262 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 80/288 (27%), Gaps = 48/288 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + + S+NI+ S + + +DI+ LQE+ N Sbjct: 13 NSLIITSYNIH----------KGMSPLNRFVKMEGIAAALDQVQSDIICLQEVQGQNLKR 62 Query: 82 KV----FPKNTWCIFYSTERL--INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 V FP + ++ ++ K N H AV ++ P Sbjct: 63 VVKYNEFPDQSQHEWFGEYLQLENSYGKNVEYNHGHHGNAVLSRHPL-----DPKHNVNI 117 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + SR R + ++ G ++ + + +Q + + +I Sbjct: 118 TVSRLEQRGVLHCEIQPIGWHTPIIVLCAHLNLMEND-----------REKQYEVMSQYI 166 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + + P ++AGDFN + + K K + Sbjct: 167 NNEIDQSTPLILAGDFNDWKKLSCQKLGCDLNLQE---AVLTHHGKLLPTFPAKLP--VL 221 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D + L LSDH P+S + Sbjct: 222 SLDRIYVRN-----LQVHRAWVH------KGQPWSNLSDHLPVSAEVS 258 >gi|308233639|ref|ZP_07664376.1| exodeoxyribonuclease III Xth [Atopobium vaginae DSM 15829] gi|328944401|ref|ZP_08241863.1| exodeoxyribonuclease III [Atopobium vaginae DSM 15829] gi|327490985|gb|EGF22762.1| exodeoxyribonuclease III [Atopobium vaginae DSM 15829] Length = 259 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 82/309 (26%), Gaps = 76/309 (24%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 S R VSWN+N L + L+ADI +QE Sbjct: 2 SQKHPYRFVSWNVNGLRATLKKEPSF-------------LEIFSTLNADIFAIQETK-LQ 47 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 A + + +S + ++ AV + + A D+ Sbjct: 48 AGQVDLDLDGYTQTWS----------YAERKGYSGTAVFSREKPLSTIHTIGCKAADNEG 97 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R + + +K W +D++ + + + + L Sbjct: 98 R---------VCALEFEKFWFVDVYTPNSKNELARLDERMEWDKAYREFLVGL------- 141 Query: 199 KESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDS 243 ++ P + GDFN + ++ F + Sbjct: 142 -DAQKPVITCGDFNVAHQEIDLKNPASNHENAGFSDEERAGFSSLLGAGFTDTFRSAHPT 200 Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 A + IDYF++ + + +Y SD Sbjct: 201 LEGAYSWWSYRMRSRERNAGWRIDYFLVSNRIANTVTSSAIYNEIY-----------GSD 249 Query: 295 HCPISIDYD 303 HCP+ ++ + Sbjct: 250 HCPVGLELE 258 >gi|218131485|ref|ZP_03460289.1| hypothetical protein BACEGG_03103 [Bacteroides eggerthii DSM 20697] gi|317476445|ref|ZP_07935694.1| endonuclease/Exonuclease/phosphatase [Bacteroides eggerthii 1_2_48FAA] gi|217986417|gb|EEC52754.1| hypothetical protein BACEGG_03103 [Bacteroides eggerthii DSM 20697] gi|316907471|gb|EFV29176.1| endonuclease/Exonuclease/phosphatase [Bacteroides eggerthii 1_2_48FAA] Length = 366 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 90/312 (28%), Gaps = 64/312 (20%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 + + ++ +S+NI + + Y K +ADI+ L Sbjct: 90 LNFHTSNLPEKSIKFLSYNIMGFDGANKRNGKNP-----------ILTYLKESNADILCL 138 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 QE S + + K+ + S + IA K + + Sbjct: 139 QEYASDESHRHLTQKDI-ERELKDYPYHRINVVGSGSGYSNKIACYSKFPILSARVLNYT 197 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS------------- 178 + +V ++++ I +++ HL+S + ++ Y Sbjct: 198 SNYN--------GSVLYELKLDEDTITLINNHLESNKLTKTDKDIYEDMLKAPEKEKVKS 249 Query: 179 ----------PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 + ++ + QA + I ++ GDFN + + + Sbjct: 250 GARLLVRKLAEASAIRAPQADTIAKEIA--SSRHPSIIVCGDFNDTPISYT-HRVIAQNL 306 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + F + + + ID ++ +N + + + Sbjct: 307 ND-----AFTQSGRGLGVSYNQNKFYFRIDNILISKNLQSY-------------NCTVDQ 348 Query: 289 GKRLSDHCPISI 300 + SDH PI Sbjct: 349 SIKESDHYPIWC 360 >gi|328848136|gb|EGF97385.1| hypothetical protein MELLADRAFT_70027 [Melampsora larici-populina 98AG31] Length = 301 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 31/297 (10%), Positives = 76/297 (25%), Gaps = 37/297 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L ++NI L + ++ L+ + D++ QE+ + + + Sbjct: 10 LKLATYNIRYSPPNSRPILPEAP---WSARLPLILNQLNWEEPDLIGAQEVLDHQCIDLL 66 Query: 84 --FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + + P + S+ Sbjct: 67 EGLNQLGYTGIGVGRDDGKRLGEYAPIFWKSDQFELVDHHYFWLSEEPDVPGSISWDSGQ 126 Query: 142 NRRAVELLVEINGKKIWVL-------------DIHLKSFCFLDSLENTYSPSCSLLSQQA 188 R + ++ + V I + + F D S L+ +A Sbjct: 127 TRMVTCVELKPKLNTVQVDGIFQLPGQNSLDRSIFVMNTHFDDRGSYAREQSAKLIRYRA 186 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----DDFWKTIDPNDSLIRFPKEKDSR 244 + L ++ P + GD N L + + + Sbjct: 187 EALIK------KTSKPVFLLGDLNSTPEELPYKTLTTESTGQLSFKDSRQNAKHLYGAIN 240 Query: 245 CNANKNLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +N ID ++ + + I + + SDH + Sbjct: 241 ATYTSFSKNPSVQGVIDVVML---MGYHWEAKKYGVIP---NSFEDDEYYASDHRLV 291 >gi|315151420|gb|EFT95436.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0012] Length = 254 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 84/287 (29%), Gaps = 48/287 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+ V + + + + Q D + +QE+ Sbjct: 1 MKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138 Y+T ++ + AI ++ V+ + Y L Sbjct: 54 A--------YTTFTCLSAEREGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHPE 105 Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A+ L + V+++HL + + ++ + L D I Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISDHARLAGMTVILEELHDKIA 157 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNANKNLRNK 254 Q P ++ GDFN + + + K N + P+ K Sbjct: 158 QY-----PTLLMGDFNAE-SGEEVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAEL 211 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + + + G+ SDH P+ + Sbjct: 212 EEIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248 >gi|257897862|ref|ZP_05677515.1| AP endonuclease [Enterococcus faecium Com15] gi|257835774|gb|EEV60848.1| AP endonuclease [Enterococcus faecium Com15] Length = 250 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 76/303 (25%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + ++ LDAD LQE A Sbjct: 1 MKFISWNVNGLRAIVNKNF---------------LEFFHELDADFFCLQETK-LQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + + D+ R Sbjct: 45 LDLPGYYQYWN----------YAERKGYSGTAIFAKEPALNATYGMGIDIHDTEGRL--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +++ + + + + L + Sbjct: 92 ------ITLEYSDFFLVTCYTPNSQSELKRLDYRLEWEEAFYNYLENL--------KKQK 137 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + N + F ++ Sbjct: 138 PVIVCGDLNVAHQTIDLKNWKTNQKNAGFTPEERAALSRLLDNGFIDTFRYFYPTQEGVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ ++ L SDHCP+ Sbjct: 198 SWWNYRFNSRKNNAGWRIDYFLTSKDLAPRLADAKIHT-----------DIMGSDHCPVE 246 Query: 300 IDY 302 +D Sbjct: 247 LDL 249 >gi|295087971|emb|CBK69494.1| Predicted extracellular nuclease [Bacteroides xylanisolvens XB1A] Length = 405 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 41/342 (11%), Positives = 87/342 (25%), Gaps = 71/342 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67 R+VSWNI + SL + + R + + + Sbjct: 70 PFRVVSWNIENQFDTHHDSLKNDHEFLPDAMRHWNYSRYKKKLVDVARVITAIGEWSPPA 129 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 +V L E+ + + + ++ + N I A+ ++ ++L Sbjct: 130 LVGLCEVENDTVLRDLTRRSPLKELSYRYVMTNSPDL---RGIDVALLYQRDLFKLLSSR 186 Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSP-SCSLLS 185 + + R + + + + G + V HL S +Y + +L Sbjct: 187 SISIPPLKQY--RPTRDLLHVSGLLLTGDTLDVFVCHLPSRSGGAKESESYRLYAAHILR 244 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT------------------ 227 + + SL +I GDFN Sbjct: 245 MEVDSI-----MSIRSLPQVIIMGDFNDYPTNQSIQKILEAEAPPVTTNNLASTTGSTNF 299 Query: 228 -----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK-------------- 268 + K K + K +D+ ++ Sbjct: 300 STVAPSSLKLYHLLARKAKSKDFGSYKYRGEWGLLDHLIVSGTLLNQSNHFFTSEEKANV 359 Query: 269 -------FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + + +SDH PI D++ Sbjct: 360 CLLPFLLKDDEKYGDKEPFRTYKGMKYQGGVSDHLPIYADFE 401 >gi|261211177|ref|ZP_05925466.1| extracellular nuclease-related protein [Vibrio sp. RC341] gi|260839678|gb|EEX66289.1| extracellular nuclease-related protein [Vibrio sp. RC341] Length = 867 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 49/373 (13%), Positives = 90/373 (24%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R ++ + LDADIV L E Sbjct: 471 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 530 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116 + + S R D I T + Sbjct: 531 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAVDSLGTDVITTGVIY 590 Query: 117 RKKNVRVLQQSYPLLGAKD------------SFSRAGNRRAVELLVEINGK--KIWVLDI 162 R K V++ Q + ++ + R + ++ G KI V Sbjct: 591 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVVEDGKNYQRDTLAPTFKVKGGNEKITVAVN 650 Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211 HLKS + + L Q + VI GD Sbjct: 651 HLKSKGSACWEDAAPVEQGGQAGQDLDYQGACENFRVAAAVALGDALTKIDGHKVILGDM 710 Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243 N D I + + K Sbjct: 711 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDAGAEIKHSYGYLNAVAIKHP 770 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290 + +D+ ++ + ++ + I E + Sbjct: 771 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 830 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 831 RASDHDPAVLELN 843 >gi|256965365|ref|ZP_05569536.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis HIP11704] gi|257089645|ref|ZP_05584006.1| predicted protein [Enterococcus faecalis CH188] gi|307273475|ref|ZP_07554719.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0855] gi|312903989|ref|ZP_07763158.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0635] gi|256955861|gb|EEU72493.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis HIP11704] gi|256998457|gb|EEU84977.1| predicted protein [Enterococcus faecalis CH188] gi|306509814|gb|EFM78840.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0855] gi|310632709|gb|EFQ15992.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0635] gi|315578337|gb|EFU90528.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0630] Length = 254 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 84/286 (29%), Gaps = 46/286 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+ V + + + + Q D + +QE+ Sbjct: 1 MKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138 Y+T ++ + AI ++ V+ + Y L Sbjct: 54 A--------YTTFTCLSAEREGDGQGEGLAILYNEQKVQTIDTGYFWLSETPQQPSIHPE 105 Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A+ L + V+++HL + + ++ + L D I Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-PKEKDSRCNANKNLRNKI 255 Q P ++ GDFN + + K D + + P+ K Sbjct: 158 QY-----PTLLMGDFNAESGEAVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAELE 212 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + + + G+ SDH P+ + Sbjct: 213 EIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248 >gi|190345324|gb|EDK37192.2| hypothetical protein PGUG_01290 [Meyerozyma guilliermondii ATCC 6260] Length = 720 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 85/327 (25%), Gaps = 41/327 (12%) Query: 15 PCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + S L+S+N + + + L++ + D+V +Q Sbjct: 371 TTSDSEPDSFTLLSYNTLCQHYAPSKLYKFTPSWALDWEFRRAALKEEVLSYKTDVVCMQ 430 Query: 73 EMGSYNAVAKVFPKN----TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-- 126 E+ + P +F+ R DS A + +L + Sbjct: 431 EVETRTFHDFWVPVMAEIGYKGVFFCKTRSKTMGSVDSKKVDGCATFYKSSKFELLTKMN 490 Query: 127 ---------SYPLLGAKDSFSRAGNR----RAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 S KD F+R N+ L +G+KI V + HL + Sbjct: 491 FEYNSVCMGSDKYKKTKDLFNRFMNKDNIALITYLQHLESGEKILVTNTHLHWDPAFND- 549 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 LL + LK + VI GDFN + ++ + Sbjct: 550 -VKALQVGILLEELQGVLKKFGHTDDVKNANVVICGDFNSVKDSAVYQLFSSGSVTKHPD 608 Query: 234 LIRFPKEKDSRC-----------------NANKNLRNKIPIDYFVMDQ-NAYKFLIQESF 275 L + + N + IDY N + Sbjct: 609 LDGRDYGRFTDEGFKHVFKLKSAYDGELPFTNFSPGFTEVIDYIWYTPGNLRVKGLLGKI 668 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 + SDH I + Sbjct: 669 DDNYLKNCIGFPDAHFPSDHIAIVTKF 695 >gi|262370848|ref|ZP_06064172.1| catabolite repression control protein [Acinetobacter johnsonii SH046] gi|262314210|gb|EEY95253.1| catabolite repression control protein [Acinetobacter johnsonii SH046] Length = 272 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +R+VS N+N L ++ + + DAD++ +QE ++ Sbjct: 14 LRVVSINVNGLRS---------------AEKKGIFDWIATSDADVICMQESRITHEQWTN 58 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 F W ++ A+ + V DS R Sbjct: 59 KFKPEGWHTHLFPAERPGYA----------GTAIYSRLPFVSVTDGLGFELADSQGRF-- 106 Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++ + + + ++L S + + + K + Q ++ Sbjct: 107 ---ISAEFDLGLDQNVHICSLYLPSGSSGEEAQVRKD-------HFLEEYKQILKQWRDE 156 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD+N + + + I + +E Sbjct: 157 NKSVIVCGDYNIVHKRIDIKNWSGNQKASGCLPHERSWLDHIYDELGYVDTFREVRPEAE 216 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + + + SDH P Sbjct: 217 LYSWWSNRGQARAKNVGWRIDYQACSPDWKARTVNAWV-----------YKETWFSDHAP 265 Query: 298 ISIDY 302 + IDY Sbjct: 266 VIIDY 270 >gi|255039474|ref|YP_003090095.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM 18053] gi|254952230|gb|ACT96930.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM 18053] Length = 233 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 39/281 (13%), Positives = 78/281 (27%), Gaps = 49/281 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+S+NI + S+ + + K D D+V LQ + S K Sbjct: 1 MKLMSFNIRH-----------GLNNQEESNLRDILRIIKENDPDLVALQAVDSLVDKGK- 48 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 I T +++ D+N++ + + Q L + + Sbjct: 49 VQFQLRQIAAQTGMYYSYAVADTNDNGTQGLGILSNWPMEKTQVIHLPKTPGADPKVLQC 108 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++L + L+ +D + QA ++ + S+ Sbjct: 109 GLIKL---SRSVTFRFCNSRLEYASVMD------------RALQAAYINQML---VNSVQ 150 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 P ++ D + N D + + +DY Sbjct: 151 PVLLGMDMGARPNEQPYFSFRRNWQDAARGSQMQTWNEGLPGD---------RLDYIFA- 200 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 L+ Y +SDH PI +F Sbjct: 201 ------LLNNKVRIKNYKVIRNYPD---VSDHYPIQATIEF 232 >gi|37993816|gb|AAR06986.1| sphingomyelinase [Bacillus cereus] Length = 252 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 79/230 (34%), Gaps = 26/230 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERPDLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230 Q + ++D+I + + + GD N N +KT+ Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHA 247 >gi|283784549|ref|YP_003364414.1| endonuclease/exonuclease/phosphatase [Citrobacter rodentium ICC168] gi|282948003|emb|CBG87567.1| putative endonuclease/exonuclease/phosphatase [Citrobacter rodentium ICC168] Length = 253 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 76/288 (26%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ N + LR + + ADIV LQE+ + V Sbjct: 9 SFKVLTINTHKGFTAFNKRF----------ILPELRDAVRTVGADIVCLQEVLGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P T F + +++ + H AV + S Sbjct: 59 LHVENWPDTTHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R + + + I V+ +HL + Q + L DW Sbjct: 114 VAGGEKRGVLYCRIVPPQLDRPIHVMCVHLGLR-------------EAHRQAQLKMLADW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + P V+AGDFN F Sbjct: 161 VNA-LPDGEPVVVAGDFNDW-----RQKASLPLKKTAGLDEIFTHAHGRPARTFPVSLPL 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +P+D + + LSDH P+S + Sbjct: 215 LPLDRIYVKNA-----------NTSSPTVLPLRSWRHLSDHAPLSAEI 251 >gi|83942579|ref|ZP_00955040.1| hypothetical protein EE36_16102 [Sulfitobacter sp. EE-36] gi|83846672|gb|EAP84548.1| hypothetical protein EE36_16102 [Sulfitobacter sp. EE-36] Length = 235 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 78/280 (27%), Gaps = 55/280 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+ S+N+ + D + + + L ADIV LQE Sbjct: 5 PLRIASYNMRKAMGTDR-----------KRDPARILRVIQTLAADIVVLQEADMRLGPRP 53 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + S A+ +R + + + L G Sbjct: 54 SALPMDQVTAQTGLIAVPVPSEVSIGWHGNAVLLRPEAELIEVKHLNLPGM-------EP 106 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R A+ + ++ + ++ HL Q L + + S Sbjct: 107 RGAMVVDFDLRDIPLRIIATHLGL-------------MRRSRRAQLSALIAHLDAQ--SK 151 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 P +IAGD N +++ + + + + +D + Sbjct: 152 RPTLIAGDMNEW------------SLNVGLGRLAHHFDIYAPGKSYHARLPLAALDRIAV 199 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D ++ +R SDH PI +D+ Sbjct: 200 DDAL----------HVMGGGVCETDDARRASDHLPIWLDF 229 >gi|20090923|ref|NP_616998.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina acetivorans C2A] gi|19916002|gb|AAM05478.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina acetivorans C2A] Length = 260 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 71/309 (22%), Gaps = 77/309 (24%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYN 78 + L+SWN+N L D++ +QE Sbjct: 2 PENYNLISWNVNGLRAAMKKGF---------------LDLLLEQKFDVICVQETKASPEK 46 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 +V + ++ + +S + + P Sbjct: 47 LPREVKNIPGYHNYFVSAERSGYSGVGTFSKQK-----------------PFKVETGMGI 89 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 +R L V+ +++I+ + D+ Sbjct: 90 EEFDREGRFLRVDYEN--FTLMNIYFPNG-------KASQERLEYKMSFYDAFLDYANAL 140 Query: 199 KESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 K VI GD N K D + Sbjct: 141 KAEGKKLVICGDVNTAHREIDLARPKENETTSGFLPEERAWMDKFFDAGYLDTFRLFNSE 200 Query: 243 SRCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +LR + +DYF + +N + SDH Sbjct: 201 GGNYSWWSLRTRARERNVGWRLDYFFVSENLRDNVKAAPI-----------YPEITGSDH 249 Query: 296 CPISIDYDF 304 CP+ ++ +F Sbjct: 250 CPVGLELEF 258 >gi|163942794|ref|YP_001647678.1| endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis KBAB4] gi|229014262|ref|ZP_04171382.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048] gi|229135910|ref|ZP_04264673.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196] gi|163864991|gb|ABY46050.1| Endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis KBAB4] gi|228647552|gb|EEL03624.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196] gi|228747039|gb|EEL96922.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048] Length = 352 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 106/324 (32%), Gaps = 64/324 (19%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T ++ + + +N ++D Sbjct: 50 AHGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117 LQE+ + + F N S + + ++ Sbjct: 110 LQEIDIKSM--RSFDVNGHEFLKKGLPDYASSFGKNYDTKWVPVPITSPMGYAEAGLSTF 167 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKI-WVLDIHLKSFCFLDSLE 174 K + + L G + R + R VE + +N K ++++HL + Sbjct: 168 SKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHKIPVNNGKFVRLVNLHLSA-------- 219 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 Y + QQ ++LK+++ + ++ ++ GD+N+ I+ +D + P + Sbjct: 220 --YDEGGKIRKQQVEYLKEYMNKHYKNGDYVIMGGDWNQLISNAQLSDPKFVKERPEWLV 277 Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278 D + ID F++ N ++ ++ Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 335 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P+S + Sbjct: 336 KFEN----------SDHNPVSAVF 349 >gi|253734882|ref|ZP_04869047.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus TCH130] gi|253727064|gb|EES95793.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus TCH130] Length = 275 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 80/278 (28%), Gaps = 28/278 (10%) Query: 43 WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE------ 96 + +D Y K + D+V E A K+ Y T Sbjct: 3 NHFWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQ 60 Query: 97 --RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 S +A+ K + + F N+ V +E NG Sbjct: 61 SGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNG 119 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNR 213 K + V+ H +S DS + ++Q + + D++ + I GD N Sbjct: 120 KNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNV 175 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK 268 D K ++ ND L N +DY D++ + Sbjct: 176 N-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQ 234 Query: 269 --FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300 L+ E +E D + SDH PI Sbjct: 235 PKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 272 >gi|167830020|ref|ZP_02461491.1| Metal-dependent hydrolase [Burkholderia pseudomallei 9] Length = 290 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 40/280 (14%), Positives = 74/280 (26%), Gaps = 56/280 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++R+ ++NI+ T S + L AD++ LQE+ A Sbjct: 4 ELRIATYNIHG-----------GLGAWTASAAERIAVVLDELRADVIALQEVPLGGARGA 52 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + T AV + + L SF Sbjct: 53 DV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----SFGNREP 104 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R A++ +E + V+ HL S + S Q L + Sbjct: 105 RGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LAAFDTRA 148 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 +P ++ GD N + F + + F + R +D + Sbjct: 149 LPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS--LDRIWV 197 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++L+ + DH P+ Sbjct: 198 HPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 227 >gi|220930682|ref|YP_002507591.1| exodeoxyribonuclease III Xth [Clostridium cellulolyticum H10] gi|220001010|gb|ACL77611.1| exodeoxyribonuclease III Xth [Clostridium cellulolyticum H10] Length = 253 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 83/303 (27%), Gaps = 78/303 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +LVSWN+N L G W + K +D+DI +QE ++ Sbjct: 3 KLVSWNVNGLRACIGKGFW---------------DFFKEVDSDIFCIQETKLQEGQVELE 47 Query: 85 PKNT-WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ + ++ A+ K V + D+ R Sbjct: 48 QELEGYEQYWN----------YAVKKGYSGTAIFTKIKPVSSSCGIGIEEHDNEGR---- 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++++++ + + L++ Sbjct: 94 -----VITLEFDQYFLVNVYTPNSKRELERLEYRMKWEDDFRIYLKQLEE--------TK 140 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P +I GD N + + + + + + + A Sbjct: 141 PVIICGDMNVAHKEIDIKNPRSNKRSAGFTMEEREKFSELLEQGFVDSYRTLYPDKTGAY 200 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF + + E+ SDHCP+ Sbjct: 201 TWWSYMFKARERNVGWRIDYFCVSEVLK-----------NIIEEADIYSEIMGSDHCPVG 249 Query: 300 IDY 302 + Sbjct: 250 LTI 252 >gi|300784682|ref|YP_003764973.1| exodeoxyribonuclease III [Amycolatopsis mediterranei U32] gi|299794196|gb|ADJ44571.1| exodeoxyribonuclease III [Amycolatopsis mediterranei U32] Length = 258 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 75/304 (24%), Gaps = 71/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + + D++ LQE+ + Sbjct: 1 MRIATWNVN----------------SIVPRLPRVLGFLEETAPDVLCLQELKNTTEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + + L G + R Sbjct: 42 -------FPAAEIEALGYEVAAYGLGRWNGVGIVSRVGVSDVVRG-LPGEPQFDGASEAR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + D+ Y + L + + Sbjct: 94 A-----IGATCGGVRVWSVYVPNGREPDNPHYAYK------LEWLSSLHSLVASEVSDG- 141 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF + GDFN + + FP+ + Sbjct: 142 PFAVLGDFNVAPTDADVWDIAVFAESTHVTKPEREALARLRDLGLSDVFPRPLKYD-HPF 200 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID ++ + D +GK SDH PI Sbjct: 201 TYWDYRAGNFPNNKGMRIDLVYGNEAFTSAVTDSYV-------DRNARKGKGPSDHAPIV 253 Query: 300 IDYD 303 +D D Sbjct: 254 VDLD 257 >gi|316933480|ref|YP_004108462.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1] gi|315601194|gb|ADU43729.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1] Length = 256 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 78/304 (25%), Gaps = 72/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N ++ +L + K +IV LQE+ + +A Sbjct: 1 MKIATFNVNNVN----------------KRLPVLLAWLKAARPEIVCLQELKAADA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + R ++ + +A+ + ++ L GA +R Sbjct: 41 ------DFPEAALRRAGYTAAWAGQKSWNGVAILARRREIVVTRRRLPGAP---HDKQSR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + I V ++ + + + + L +S Sbjct: 92 YIEAAV-----AGIIVGCLYAPNGNPQPGPKFDEKLA------WLKRLNRHAATLLKSGA 140 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGDFN + + Sbjct: 141 PVVLAGDFNVVPTPADIYPTKSWDKDALVQPAPRKLFAALLRQGWTDALRHCHPDDA-PY 199 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ID+ ++D + L + D SDH P Sbjct: 200 TFWSYWRKRFERDAGLRIDHLLLDPSLALRLKRAGV-------DRKVRAAPEASDHAPAW 252 Query: 300 IDYD 303 I D Sbjct: 253 IMID 256 >gi|227497368|ref|ZP_03927600.1| possible exodeoxyribonuclease III [Actinomyces urogenitalis DSM 15434] gi|226833239|gb|EEH65622.1| possible exodeoxyribonuclease III [Actinomyces urogenitalis DSM 15434] Length = 274 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 86/306 (28%), Gaps = 61/306 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ + N+N + + + + + D++ LQE+ + A Sbjct: 1 MRIATVNVNGIRA---------------AARKGMGTWLEASAPDVLLLQEVRADEETAAA 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + R+ + +AVR+ L +S + + + Sbjct: 46 L-LPGYSSLIWPCRIKGRAG--------VGVAVREGGPVRLGESRYGVAGQAEEPDVDSG 96 Query: 144 RAVELLVEINGKK--IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R +E+ + + + V+ +L S + L+ + L + + Sbjct: 97 RWLEVDLADADAQTVLTVVSAYLHSGQIGTEKMDQKYAHLELVDTRMGEL---LASAQAG 153 Query: 202 LVPFVIAGDFNRKINYLGNNDDF----------------WKTIDPNDSLIRFPKEKDSRC 245 V+AGD N + + + + + + Sbjct: 154 GPQVVMAGDLNVVRSERDIKNWKPNHNKVAGVLDEEIAHLEGWFASGWVDVARHLEPEAQ 213 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + IDY V + + D S ++ SDH Sbjct: 214 GPYTWWSQRGKAFDNDAGWRIDYQVATPSLAGRAVSA-------VVDRAASYAEQWSDHA 266 Query: 297 PISIDY 302 P+ ++Y Sbjct: 267 PLVVEY 272 >gi|119477271|ref|ZP_01617507.1| Endonuclease/exonuclease/phosphatase [marine gamma proteobacterium HTCC2143] gi|119449634|gb|EAW30872.1| Endonuclease/exonuclease/phosphatase [marine gamma proteobacterium HTCC2143] Length = 260 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 44/298 (14%), Positives = 83/298 (27%), Gaps = 59/298 (19%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 A+ ++RL S+NI+ + + LR + ++AD++FLQE+ Sbjct: 8 PATEPLQLRLCSYNIH----------KGICAANSRAILPQLRHSIRTVNADMMFLQEVVG 57 Query: 77 YNAVAKV---------FPKNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A + + + + H A+ K Sbjct: 58 EKQLADLSSKKVSGAAVEYPQFEFLADEVWPHYAYGRNALYQTGHHGNAILSKYPFDE-- 115 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 S R R + +EI + I F + Sbjct: 116 ---WDNTDVSHWRFSQRGILLGKLEIG-----LYVICTHFGLFG-----------RERKR 156 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 Q L D + ++ P +IAGDFN L + + R + ++ Sbjct: 157 QLVQLLDLVAERVPDAAPLIIAGDFNDWSGSLDRQ---IRHRIGVQDVYREAYGRRAKTF 213 Query: 247 ANKNLRNKIPIDYFVMDQ-NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K + D + ++LSDHC + ++ Sbjct: 214 PAKFPVFSM--DRIYYRNMELIDAEVLSGM------------PWQQLSDHCALYAEFS 257 >gi|313205335|ref|YP_004043992.1| endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes WB4] gi|312444651|gb|ADQ81007.1| Endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes WB4] Length = 343 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 38/348 (10%), Positives = 84/348 (24%), Gaps = 53/348 (15%) Query: 1 MIRKYVLALVFFLVPCTASVA-----QKVRLVSWNINTLSE-------QEGVSLWKNSVK 48 M + + F+ + Q +++ +N+ + + L Sbjct: 1 MKKNVLTVFCLFIALIINAQTAEKEKQNFKIMCYNVENFFDCVDDSTTNDNEFLPTGIRA 60 Query: 49 RTTSDYTL----LRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN 100 + Y + + + +V + E+ S + + + + Sbjct: 61 WNYTKYQKKQANIARVITAIGGWEAPALVGMCEVESRKCLIDL---TRYSGLKNLRYKFI 117 Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 H + I A+ + + + D+ + V G + V Sbjct: 118 HHESPDPRGIDVALLFQPSQFKPFHDQAIKIRYPDAPANRTRDILFVSGVIPTGDTLHVF 177 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 H S + + + + + D I VI GDFN Sbjct: 178 VCHFPSRLGGEMESDDKRLFVASV---VRAKADSIFA-ASPKPNIVIMGDFNDFPTNSSL 233 Query: 221 -----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 ++ K +NK+ + +D ++ N K Sbjct: 234 LEVLKAKPIVDSVSTQSLYNLMYKLHTEGKGSNKHSGDWGALDQMIVSGNLLKSSNSIYT 293 Query: 276 SEI---------------------LYNEDDIKSRGKRLSDHCPISIDY 302 + + SDH PI D+ Sbjct: 294 KQSDAHFFDADFLLENDNTFLGKQPFRTYAGMKYQGGFSDHLPIYTDF 341 >gi|325107212|ref|YP_004268280.1| deoxyribonuclease I [Planctomyces brasiliensis DSM 5305] gi|324967480|gb|ADY58258.1| Deoxyribonuclease I [Planctomyces brasiliensis DSM 5305] Length = 330 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 39/291 (13%), Positives = 82/291 (28%), Gaps = 36/291 (12%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P A K+RL S+NI S L + + D+V +QE+ Sbjct: 54 PAPVFPADKLRLASFNIQVFG---------QSKLGDKVVINRLAEVIRQF--DLVAIQEI 102 Query: 75 GS-YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 S ++ F + + LI + + A R + + S + Sbjct: 103 RSADQSLMPNFMEIVNKDGSNYHYLIGPRLGRTISKEQYAYVYRSDRIEPIDGSMFTVDD 162 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 A G++ I+ + E Q + Sbjct: 163 PKDLLHREPTVASFRSRVGEGERFTFTLINCHTDPDEADFEVA----------QLAQVYK 212 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 +++ + GD N + L + N K + Sbjct: 213 FVSTFHRKEDDIFLLGDLNVDADDLAPFNSI---------PTVASIVPAGPTNTRKTKQY 263 Query: 254 KIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D+ +++ +F + ++ + D + + +SDH P+ ++ Sbjct: 264 ----DHILVNLSQTAEFTGRAGVFDMAEHFDISQEQAIDISDHQPVWAEFS 310 >gi|262197113|ref|YP_003268322.1| endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM 14365] gi|262080460|gb|ACY16429.1| Endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM 14365] Length = 247 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 42/287 (14%), Positives = 81/287 (28%), Gaps = 55/287 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 S A +R S+NI+ R + + LD I+ LQE+ S Sbjct: 10 SAAPPLRAASYNIHQF-----------CGHRWRLNVGRSVAALRALDVPILALQEVLSGR 58 Query: 79 AV-AKVFPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + ST + H S A+ + + + L Sbjct: 59 VFPRRGLVGPNPSSWLSTALGMQHIAHPTVSAEHGEYGNAILTRLPVLDSGLWDL----- 113 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + R A+ ++ + + V+ H Q L D I Sbjct: 114 ALGWREPRNALYAVLATDAGPLRVVTTHFGLRSS-------------ERINQVYRLLDHI 160 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 Q ++ +P ++ GDFN W + + + + + Sbjct: 161 NQ--DTELPTLLLGDFNE-----------WSRHGLVTRAVEEHFATHAPLASYPAVLPIV 207 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 P+D + + + + +R SDH P+ + Sbjct: 208 PLDRIFWRPSGLVERVYRA----------RGTLFRRASDHRPVIAEL 244 >gi|182626631|ref|ZP_02954375.1| exodeoxyribonuclease III [Clostridium perfringens D str. JGS1721] gi|177908025|gb|EDT70604.1| exodeoxyribonuclease III [Clostridium perfringens D str. JGS1721] Length = 250 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 39/299 (13%), Positives = 75/299 (25%), Gaps = 78/299 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L Y K+ DADI LQE Sbjct: 1 MKLISWNVNGLRACVKKGF---------------LDYFKSEDADIFCLQETKLQEG-QID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + G R Sbjct: 45 LDLEGYHQYWNYAEKKGY----------SGTAIFTKKEPLNV----YYGINMEHHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + L S Sbjct: 91 -----VITLEFEDFFMVTVYTPNSQSELARLEYRMEWEDDFRNYLLEL--------SSKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GD N D + T+ + + F Sbjct: 138 GVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDKFSTLLSSGFIDTFRYFNPDLEGVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF++ N + + S + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEASIDTEIL-----------GSDHCPV 245 >gi|329905898|ref|ZP_08274279.1| hypothetical protein IMCC9480_2684 [Oxalobacteraceae bacterium IMCC9480] gi|327547429|gb|EGF32252.1| hypothetical protein IMCC9480_2684 [Oxalobacteraceae bacterium IMCC9480] Length = 326 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 97/316 (30%), Gaps = 35/316 (11%) Query: 21 AQKVRLVSWNINTLSEQE---GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 ++R S+N+ L+ S+ + + L Q LDAD++ QE+ S Sbjct: 2 PHEIRFASFNVFNLALPGARFYDGQEPYSISQYDDKISWLAQQIDRLDADVIGFQEIFSQ 61 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN--VRVLQQSYP-----L 130 +A+ V + + + RD A+ R V VL + P Sbjct: 62 DALRDVLARTR-HFRDAHHAGSDPQPRDGPLTPSVALVSRLPFAGVPVLHRDLPRQLAIA 120 Query: 131 LGAKDSFSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 L + R +++ + +G + H+KS + + T L + Sbjct: 121 LPDTPTPMTQFTRPILQVPLALPDGGTLQAFVTHMKSKRPDWNPDETEDDPYHLGIASLR 180 Query: 190 WLKDW-----------ITQKKESLVPFVIAGDFNRKINYLGN----------NDDFWKTI 228 L VP V+ GDFN + ++ + Sbjct: 181 SLIRRGTDALGLRYLLTDLLLAQRVPLVVMGDFNDDAGAVSTQLVMGTGRRGKSALYERL 240 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA--YKFLIQESFSEILYNEDDIK 286 + + + + + +D+ ++ + E+LY D + Sbjct: 241 FDSLRIQTGRDPSRDVGYTHLHDGAYLTLDHVLVSEEFHPASRYAIGEVLEVLYLNDHLG 300 Query: 287 SRGKRLSDHCPISIDY 302 R SDH + + Sbjct: 301 LRLAAASDHGQVLVRI 316 >gi|291514150|emb|CBK63360.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301] Length = 539 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 40/281 (14%), Positives = 85/281 (30%), Gaps = 40/281 (14%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AVAKVF 84 +S+NI + +G ++WKN + I+ LQE + +AK Sbjct: 283 ISFNIRVDNPSDGDNIWKNRK-------QAVITMINRQQPTIMGLQEAQPHQITYLAKQC 335 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG-----AKDSFSR 139 P+ W ++ AI + V +L + L + Sbjct: 336 PEYAWYGLGRDTGEAPPKTETYASEECMAIFFQTSIVEMLDKGTFWLSETPNIPSKGWDA 395 Query: 140 AGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 NR L + GK+ + + HL + + + + + + I + Sbjct: 396 NYNRSCTWALFRQKTTGKRFYFFNTHLDNSGAV------------ARKESIKLIINKIEE 443 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 +P + DFN + + + + ++++ N K + + Sbjct: 444 VNSEQLPVFLTADFNSDTDES-CFNPLHQVMKD-ARATAPVTDQEATYNGYKTSGTR-KL 500 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 D+ D + + +SDH P+ Sbjct: 501 DHIFYDNGCVASI---------FQTLKENYGAPYISDHYPV 532 >gi|239906954|ref|YP_002953695.1| exodeoxyribonuclease III [Desulfovibrio magneticus RS-1] gi|239796820|dbj|BAH75809.1| exodeoxyribonuclease III [Desulfovibrio magneticus RS-1] Length = 254 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 72/302 (23%), Gaps = 76/302 (25%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 LVSWN+N L W + AD+V +QE F Sbjct: 3 LVSWNVNGLRAVVQKGFW---------------DWLAGSGADVVGIQESKIQTGHEADFG 47 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + K S R + + + + D R Sbjct: 48 HTDQ--YKTVWCSSTVKKGYSG----VGCFYRAEPLSIA------MELPDPAFAGEGRL- 94 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + + ++ +I+ + A+ L+ P Sbjct: 95 ----LHLEYEEFHFFNIYFPNGGRGPERLAYKLGYYDAFLAHAEELRKH--------KPI 142 Query: 206 VIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 V+ GDFN +L + + F + Sbjct: 143 VVCGDFNTAHTALDLKNAKANEKTSGFLPEERAWLDRFVAAGYVDTFRLFTTEGGH-YSW 201 Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + IDYF + + + + SDHCP+ ++ Sbjct: 202 WDYRFKARDRNVGWRIDYFFVSEELRPKVKRAWI-----------DAAVMGSDHCPVGLE 250 Query: 302 YD 303 D Sbjct: 251 LD 252 >gi|193216364|ref|YP_001997563.1| endonuclease/exonuclease/phosphatase [Chloroherpeton thalassium ATCC 35110] gi|193089841|gb|ACF15116.1| Endonuclease/exonuclease/phosphatase [Chloroherpeton thalassium ATCC 35110] Length = 413 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 42/341 (12%), Positives = 87/341 (25%), Gaps = 74/341 (21%) Query: 3 RKYVLALVF-FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +K ++ L F P + + ++ ++N L + S Sbjct: 4 KKILIFLCLTFFFPIVSFSQIRFKVATYNCLQLDKSGFNSRKSYFKT-----------II 52 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 ++ DI QE+ A + + + D+ + R V Sbjct: 53 NEINPDIFLTQEIKEEAAADSLLSLLNETSISFSRAP-----YINGPDMDNMLFYRDDVV 107 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 ++ Q+ R E +V+I + + HLK+ Sbjct: 108 SLISQNTIQTS---------PRYLWEYVVKIGSDTLRIYSCHLKASSSESDE-------- 150 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN---------------DDF-- 224 + L++++ + F+I GD N N D Sbjct: 151 QTRLGEVTALRNYLNE-LPENSEFIIVGDLNLYDNAEPAYQKLIADETNNIGRAKDWLAS 209 Query: 225 --WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK----FLIQESFSEI 278 W S+ + D+ + QN + +S + Sbjct: 210 GSWHNSSTYASIHTQSTRTTDLGDGGSTGGLDDRFDFILTSQNLNDASRIEYVADSMTPF 269 Query: 279 ----------------LYNEDDIKSRGKRLSDHCPISIDYD 303 + R SDH P+ +++ Sbjct: 270 GNDGNLLNKDINNTANTAVSTSVADALWRASDHLPVIAEFE 310 >gi|146419313|ref|XP_001485619.1| hypothetical protein PGUG_01290 [Meyerozyma guilliermondii ATCC 6260] Length = 720 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 85/327 (25%), Gaps = 41/327 (12%) Query: 15 PCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + S L+S+N + + + L++ + D+V +Q Sbjct: 371 TTSDSEPDSFTLLSYNTLCQHYAPSKLYKFTPSWALDWEFRRAALKEEVLSYKTDVVCMQ 430 Query: 73 EMGSYNAVAKVFPKN----TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-- 126 E+ + P +F+ R DS A + +L + Sbjct: 431 EVETRTFHDFWVPVMAEIGYKGVFFCKTRSKTMGSVDSKKVDGCATFYKSSKFELLTKMN 490 Query: 127 ---------SYPLLGAKDSFSRAGNR----RAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 S KD F+R N+ L +G+KI V + HL + Sbjct: 491 FEYNSVCMGSDKYKKTKDLFNRFMNKDNIALITYLQHLESGEKILVTNTHLHWDPAFND- 549 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 LL + LK + VI GDFN + ++ + Sbjct: 550 -VKALQVGILLEELQGVLKKFGHTDDVKNANVVICGDFNSVKDSAVYQLFSSGSVTKHPD 608 Query: 234 LIRFPKEKDSRC-----------------NANKNLRNKIPIDYFVMDQ-NAYKFLIQESF 275 L + + N + IDY N + Sbjct: 609 LDGRDYGRFTDEGFKHVFKLKSAYDGELPFTNFSPGFTEVIDYIWYTPGNLRVKGLLGKI 668 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 + SDH I + Sbjct: 669 DDNYLKNCIGFPDAHFPSDHIAIVTKF 695 >gi|227082737|ref|YP_002811288.1| extracellular nuclease-related protein [Vibrio cholerae M66-2] gi|298500556|ref|ZP_07010360.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|227010625|gb|ACP06837.1| extracellular nuclease-related protein [Vibrio cholerae M66-2] gi|297540725|gb|EFH76782.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 869 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 48/373 (12%), Positives = 89/373 (23%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R ++ + LDADIV L E Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116 + + S R D I T + Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162 R K V++ Q + ++ + R + ++ G KI V Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652 Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211 H KS + + L Q + VI GD Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712 Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243 N D I + + K Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIADVEQFGDAGAEIKHSYGYLNAVAMKHP 772 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290 + +D+ ++ + ++ + I E + Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 833 RASDHDPAVLELN 845 >gi|260904213|ref|ZP_05912535.1| exodeoxyribonuclease III [Brevibacterium linens BL2] Length = 256 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 35/278 (12%), Positives = 81/278 (29%), Gaps = 52/278 (18%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 + + + + D D++ +QE+ + FP++ + + + Sbjct: 5 RARHDRIGAWLDRSDVDVLAIQELKCK---DEQFPEDLFTS-------RGYEVSFHGLNQ 54 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 +A+ + P +G D S + + V +++ + L Sbjct: 55 WNGVAIASRVGLED----PEIGFTDIPSFGEEPVVEARALSATCGGVRVYSLYVPNGREL 110 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI------------- 215 D TY + + L I+ + + V+ GDFN Sbjct: 111 DHPHYTYK------LEWYRALTADISAQLSETPDKKLVLCGDFNVAPLDEDVWDMAEFDG 164 Query: 216 --NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK--------IPIDYFVMDQN 265 + D + ++ + + + ID+ + + Sbjct: 165 LTHVSEPERDAFNSLLGAGLTEVTRQFTPGPGVYTFWDYQRLAFPKKKGMRIDFELASPS 224 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + D + +GK SDH P+ +DY+ Sbjct: 225 LAEKATGAEI-------DREERKGKGASDHAPVIVDYE 255 >gi|325685174|gb|EGD27297.1| exodeoxyribonuclease III [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 275 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 85/304 (27%), Gaps = 56/304 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL+SWNI++L+ + + + R + + +LD D++ LQE + Sbjct: 1 MRLISWNIDSLNAALTGTSPRAEMTRG------VLKNLHDLDPDVLALQETKLPASGPSK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + S + + K + P +GA + G Sbjct: 55 KHQAALADLFPEYYFVWRSSMEPARKGYAGTMFLYKKGLDPVVTRPEIGAPEPMDFEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V ++ + + L + Sbjct: 114 -----ILTLEFPDFYVTQVYTPNAGNGLVRLGDRQEWDKCYRAYLEEL--------DKKK 160 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + +GDFN + + F + Sbjct: 161 PVLASGDFNAAYQEIDLKHPENNHHSAGFTDEERAGFGQLLAAGFTDTFRQIHGQVEGVY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY+++ + + ++ G+R DHCPI Sbjct: 221 SWWAQRVRTAKANNSGWRIDYWLVSNRLADQVEKS----------EMIETGERA-DHCPI 269 Query: 299 SIDY 302 ++ Sbjct: 270 LLEI 273 >gi|294777430|ref|ZP_06742881.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus PC510] gi|294448498|gb|EFG17047.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus PC510] Length = 276 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 83/309 (26%), Gaps = 71/309 (22%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K +L L L+ +A +RL+++NI + + V D+ + Sbjct: 30 MKKTLLLLFTLLLALSAQSQNSLRLMTYNIKNANGMDDVC-----------DFQRIADVI 78 Query: 62 KNLDADIVFLQEMGSYN-------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 ++ ++V LQE+ S + ++ + +++ + I Sbjct: 79 NHIHPEVVALQELDSMTHRSGQKYVLGEIAGRTQMHAYFAP--------AIDYDGGKYGI 130 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + K + V ++ L G R R + + + Sbjct: 131 GLLTKEIPVSLKTMTLPG------REEARALIMAEFDN-------YIYCCTHLSLTEEDR 177 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 L+ PF +AGD N + Sbjct: 178 -------------MASLELIKDFAAAHKKPFFLAGDLNAEPESAFIKYL----------Q 214 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 F D + IDY + K S + SD Sbjct: 215 QDFQILSDVNQHTFPAPAPTETIDYITALKQNMKGFTVTSAQVVNEPV---------ASD 265 Query: 295 HCPISIDYD 303 H P+ I + Sbjct: 266 HRPLVIVLE 274 >gi|229158676|ref|ZP_04286734.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 4342] gi|228624660|gb|EEK81429.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 4342] Length = 352 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 45/325 (13%), Positives = 108/325 (33%), Gaps = 70/325 (21%) Query: 21 AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++ ++NI G +S ++T + + + +N ++D LQ Sbjct: 52 GNEFKVTTFNIGYGGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFALLQ 111 Query: 73 EMG----------SYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 E+ + + K P + + + N ++ Sbjct: 112 EVDIKSLRSFDVNGHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYA-----EAGLST 166 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSL 173 K + + L G + R + R VE + +N GK + ++++HL + Sbjct: 167 FSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHSIPVNNGKHVRLVNLHLSA------- 219 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 Y + QQ ++LK+++ + ++ ++ GD+N+ ++ + +D + P Sbjct: 220 ---YDEGGKIRKQQVEFLKEYMNKHYKNGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWL 276 Query: 234 LIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSE 277 + D + ID F++ N ++ + Sbjct: 277 VELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKD 334 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302 + + SDH P+S + Sbjct: 335 LKFEN----------SDHNPVSAVF 349 >gi|258512235|ref|YP_003185669.1| exodeoxyribonuclease III Xth [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478961|gb|ACV59280.1| exodeoxyribonuclease III Xth [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 252 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 75/304 (24%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R VSWN+N L R + Y ++ DAD+ +QE ++ Sbjct: 1 MRFVSWNVNGL--------------RACVNKGAFLPYFESADADVFCIQETKLQAGQIEL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + F++ +S I + + R Sbjct: 47 PIGEAYQQFWNYAERKGYSGTAVFTRI---------------TPLDVRYGFGDGNDPEGR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +V+ ++ + S L + Sbjct: 92 I-----ITLEFPSFYVVTVYTPNAKRDLSRLPYRLEWEDAFCAYLCAL--------DREK 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + F + + Sbjct: 139 PVIACGDLNVAHEEIDIKNAKSNRGNSGFTDEERAKMTELLAAGFVDTFRALHPNVTDKY 198 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N IDYF++ + ++ + + SDHCP+ Sbjct: 199 TWWSNMPGVRERNIGWRIDYFLVSERLRDRILDARIDDHVL-----------GSDHCPVV 247 Query: 300 IDYD 303 ++ D Sbjct: 248 LEVD 251 >gi|242817518|ref|XP_002486972.1| endonuclease/exonuclease/phosphatase family protein [Talaromyces stipitatus ATCC 10500] gi|218713437|gb|EED12861.1| endonuclease/exonuclease/phosphatase family protein [Talaromyces stipitatus ATCC 10500] Length = 334 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 84/314 (26%), Gaps = 28/314 (8%) Query: 6 VLALVFF-LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 + L + + A + +R+++ NI + + K +R L +++ Sbjct: 23 LFTLTWIPALEMKAQASLSLRILTHNIRY-ATSQPFRGEKPWAERKQLLLNELVYNTRHI 81 Query: 65 DADIVFLQEMGSYNAVAKVFP-------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 D + LQE+ + + W S Sbjct: 82 DESFICLQEVLHVQLEDILGGLTQAAKAEEQWAYIGVGRDDGEKQGEYSPIIYQPVTWQL 141 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLEN 175 V P +K S+ A R + GK + VL+ HL D Sbjct: 142 HHWETVWLSETPEKPSK-SWDAASTRIVTIGVFRHRATGKFLLVLNTHL-----DDQGPR 195 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVP-FVIAGDFNRKINYLGNNDDFWK---TIDPN 231 + + ++ + ++ + + V+AGDFN + K +D Sbjct: 196 SRYEAARII---LGKINGYLDGSYDETISGVVLAGDFNSQETQEAYQTLTAKESILVDSQ 252 Query: 232 DSLIRFPKEKDSRCNANKNL--RNKIPIDYFVMDQNAYKFLIQESFSEI--LYNEDDIKS 287 + K IDY ++ Sbjct: 253 KITKATEHYGNEITWTGFGYEDEPKSRIDYILLGPVDKSSDEPHHRWNSIGYAVLASRFD 312 Query: 288 RGKRLSDHCPISID 301 G SDH + +D Sbjct: 313 DGVWNSDHRAVVVD 326 >gi|317125945|ref|YP_004100057.1| endonuclease/exonuclease/phosphatase [Intrasporangium calvum DSM 43043] gi|315590033|gb|ADU49330.1| Endonuclease/exonuclease/phosphatase [Intrasporangium calvum DSM 43043] Length = 255 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 68/307 (22%), Gaps = 82/307 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78 +R+ ++NI D T L K LDADI+ LQE+ Sbjct: 1 MRVATFNILNGRVPAD----------QHVDPTGLADAVKRLDADILALQEVDQNQHRSGF 50 Query: 79 -----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-----TAIAVRKKNVRVLQQSY 128 A+ + + S D +A+ + Q Sbjct: 51 ADLTSVAAEAMDAPHHRFVAAIHGSPGATWVASTGDEQPDSAAYGVALLSRYPVKGWQVI 110 Query: 129 PLLGAKDSFSRAG------------NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 L R AV V+ + V+ HL Sbjct: 111 RLEPVPFRVPMRFRGRLRPYLVTDEPRVAVLATVDSPVGECTVVGTHLSFIP-------- 162 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 L+ + + P ++ GD N + Sbjct: 163 --------RWNVHQLRKVVRATLDCREPVILMGDLNMGPDQAERTTGLRAAASHA----- 209 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 ID+ ++ D + +SDH Sbjct: 210 ----------TYPVGAPSEQIDHVLVRGPL--------------TTSDSGAPALPISDHR 245 Query: 297 PISIDYD 303 + D + Sbjct: 246 ALWADVE 252 >gi|288800479|ref|ZP_06405937.1| AP endonuclease domain protein [Prevotella sp. oral taxon 299 str. F0039] gi|288332692|gb|EFC71172.1| AP endonuclease domain protein [Prevotella sp. oral taxon 299 str. F0039] Length = 363 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 89/311 (28%), Gaps = 69/311 (22%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + ++++S+NI + + + QY N ADIV LQE Sbjct: 93 SNAPEGSLKVLSYNIQSFGYEPEDETRDEQNP--------IVQYIANSGADIVCLQEAPK 144 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +V + + ++ +A+ K + + P Sbjct: 145 WRIENEVVSTLN--------PIYPYQSEVAHETSGDVLALYSKYPIISTERIPF------ 190 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL----------------------- 173 + +V ++++ I V++ HL+S + Sbjct: 191 --DSEINLSVAYRIKVDNDTILVVNNHLESNKMTKADKAGFKNMVKGNISNSGTKQESSL 248 Query: 174 -ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 N + + + Q + + + + +P ++ GDFN N N Sbjct: 249 LLNKLALAAQKRAVQVKAVVSVLKKY--ENLPQIVCGDFNEWPNGYALNTL------QKT 300 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 F + + + + ID + + + + Sbjct: 301 LTNSFVETGNGAGWSYHRSGMYVRIDNILCSKQFKPYKAKVDSEIKT------------- 347 Query: 293 SDHCPISIDYD 303 SDH PI + Sbjct: 348 SDHYPIYCYLE 358 >gi|260770890|ref|ZP_05879819.1| extracellular nuclease-related protein [Vibrio furnissii CIP 102972] gi|260614127|gb|EEX39317.1| extracellular nuclease-related protein [Vibrio furnissii CIP 102972] Length = 877 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 44/377 (11%), Positives = 92/377 (24%), Gaps = 98/377 (25%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDADIVFLQE 73 +R+ S+N+ N + G ++ R S+ + LDADIV L E Sbjct: 474 GDLRIASFNVLNYFNSPYGGDANQHGDNRGASNLTEFSMQQAKIVNAILRLDADIVGLME 533 Query: 74 MGSY-----NAVAKVFPKNT---------WCIFYSTERLINHSKR---DSNNDIHTAIAV 116 + + A+ ++ + + + ++ I T + Sbjct: 534 IENNGFGDGAAIRQLVDQLNERIDDKKKRYQFVAVDSNQDGQTDEKDSVGSDAITTGVIY 593 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGKKIWVLDIHL 164 R K V++LQ + ++ + R + ++ G + Sbjct: 594 RDKVVKLLQSRVIPMPSQQAPEVLNEEGKVIEDGKNYQRDTLAPTFKVKGGNETITVAVN 653 Query: 165 KSFCFLDSLENTYSP----------------SCSLLSQQAQWLKDWITQKKESLVPFVIA 208 + +P + A L + + + VI Sbjct: 654 HLKSKGSACWEDAAPVSEGGQGGADADLQGSCENFRVAGAVALGEALAKIDGHK---VIL 710 Query: 209 GDFNRKINYLGN-----------------------------NDDFWKTIDPNDSLIRFPK 239 GD N DD L Sbjct: 711 GDMNSYGKEDPMLVLTDYTPEKYGKVIQAARNTVIGEQPQFGDDGAVITQGFGYLSAMEL 770 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG---------- 289 + +D+ ++ + ++ I E + Sbjct: 771 AHKDNSWSYSYNDEVGALDHLLVSDSLKLRVVDAMDWHINGGESTLFDYNDEYKGDLPKY 830 Query: 290 ---KRLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 831 ADHFRASDHDPAVVELN 847 >gi|254436903|ref|ZP_05050397.1| endonuclease/exonuclease/phosphatase family [Octadecabacter antarcticus 307] gi|198252349|gb|EDY76663.1| endonuclease/exonuclease/phosphatase family [Octadecabacter antarcticus 307] Length = 236 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 47/288 (16%), Positives = 82/288 (28%), Gaps = 55/288 (19%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +A L S+NI ++G + + ADIV LQE Sbjct: 3 SAMSENAFTLTSYNIRKAIGRDG-----------KRNPERILDVLNAAVADIVILQEADF 51 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + +I+ + H + + + +P+ Sbjct: 52 RFKGRRAIFSTKDLFERTGLSVIDVAPDHPGLGWH-GNMLLVRKTVRVTSVHPIP----- 105 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 S R AV +EI +K+ ++ HL S+QAQ L I Sbjct: 106 LSGLEPRGAVATQLEIGSQKLNLIHAHLGLVP-------------RHRSRQAQDLAAHID 152 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 L P V+AGD N + + + + I Sbjct: 153 ----PLQPTVLAGDLNAAGKAPPSLSPIYACLSEVAL---------GPSFPTRWP--MIR 197 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D + L+ + + ++ SDH P+S + F Sbjct: 198 FDRIFHNSVL--RLVGAQVHD--------SALARQASDHFPVSATFAF 235 >gi|163741385|ref|ZP_02148776.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter gallaeciensis 2.10] gi|161385119|gb|EDQ09497.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter gallaeciensis 2.10] Length = 241 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 45/283 (15%), Positives = 80/283 (28%), Gaps = 55/283 (19%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 ++RL S+NI K+ Q + AD+V LQE Sbjct: 8 QPGRLRLASYNIQ-----------KSVGLDLRRRPRRTLQVIEGTGADLVLLQEADKR-L 55 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + + + ++++ S A+ R + + + L Sbjct: 56 PPRPAALPHFILDEAGWQIVDLGGAGSLGWHGNAVIWRGDGIELQDHGHIPLPG------ 109 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R AV L + + V+ HL +Q L + I + Sbjct: 110 LEPRGAVWALFQTGLGPLRVVGAHLGLTT-------------KARHEQVHHLAEVIAR-- 154 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 E +P V AGDFN + + P + + LR +D Sbjct: 155 EPALPTVWAGDFNDW-----SRQPVLDHLAPELRFV-------PPRPSFPALRPMGALDR 202 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + E++ + SDH P+ D Sbjct: 203 IAVSAGL----------EVVDSGVYRARPAHIASDHLPVWADL 235 >gi|60683576|ref|YP_213720.1| hypothetical protein BF4154 [Bacteroides fragilis NCTC 9343] gi|60495010|emb|CAH09828.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343] Length = 608 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 88/305 (28%), Gaps = 67/305 (21%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +RK +L L L +A +RL+++N+ + +G+ +Y + Sbjct: 1 MRKLLLLLFSALFVLSAQAEDVLRLMTYNVRNANGMDGIC-----------NYQRVANVI 49 Query: 62 KNLDADIVFLQEMGSYNAVA---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N DIV +QE+ S A + V + + I + Sbjct: 50 NNARPDIVAIQELDSMTARSNRTDVLKELAERTQLHPCFAPAID----YDGGKYGIGILS 105 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K + Q++ L G R R + + HL Sbjct: 106 KETPLRVQTFALPG------REEARTLLVAEFP----EYVFACTHLSLTEED-------- 147 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--FWKTIDPNDSLIR 236 + + L+ + + PF +AGDFN + D ++ + Sbjct: 148 --------RMKSLEILKSVTANTRKPFFLAGDFNSDADSGFIKDLKSTFQILS------- 192 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 K +DY + + + S I SDH Sbjct: 193 ---NPKQPTYPAS--EPKETLDYLIALKQETPTFVVNSARVI---------DEPLASDHR 238 Query: 297 PISID 301 P+ ++ Sbjct: 239 PLLVE 243 >gi|303234331|ref|ZP_07320970.1| exodeoxyribonuclease III [Finegoldia magna BVS033A4] gi|302494447|gb|EFL54214.1| exodeoxyribonuclease III [Finegoldia magna BVS033A4] Length = 253 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 83/306 (27%), Gaps = 78/306 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 ++L+SWN+N +L+ADI LQE+ N + Sbjct: 1 MKLISWNVNGYRAVMKKGFM---------------DAFNSLNADIFCLQEIKMKENQMTD 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + +N ++ V K + + D+ R Sbjct: 46 EMNIEGYHRY----------SYSANKAGYSGTLVYTKVEPIGVSFGIGIDEHDTEGR--- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 ++ + ++++++ + + L+D Sbjct: 93 ------VITCEYEDFFLVNVYTPNSKQKLERLDYRMVWEDEFHNYLNILRDR-------- 138 Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N N + + + + F + + Sbjct: 139 KPVIVCGDLNVAHNEIDLKNPQSNRRSAGFTDEERNKMSLLLNDGYIDTFRYFYPDKTDE 198 Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 IDYF++ + L+ + + SDHCP+ Sbjct: 199 YSYWSYFAKARERNAGWRIDYFIVSDDLKDNLVDAKIHQSI-----------MGSDHCPV 247 Query: 299 SIDYDF 304 ++ +F Sbjct: 248 ELEINF 253 >gi|282163799|ref|YP_003356184.1| exodeoxyribonuclease [Methanocella paludicola SANAE] gi|282156113|dbj|BAI61201.1| exodeoxyribonuclease [Methanocella paludicola SANAE] Length = 255 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 79/304 (25%), Gaps = 76/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R++ WN+N L + + DADIV +QE + Sbjct: 1 MRMLCWNVNGLRAVLKKGF---------------VDWLRREDADIVCIQETKAAAEQMPP 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +V + + ++ ++ +A+ K + D R Sbjct: 46 EVTGIPGYHFYSTSPLEK---------KGYSGVALFTKEEPKSVSYGFGIEKYDIEGR-- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + K +L I+ + D++ + K Sbjct: 95 -------TIIADYGKFVLLSIYFPNG-------KMSQERLDYKMGFYDAFLDYVDKLKAE 140 Query: 202 LVPFVIAGDFNRKINYLGN---------------NDDFWKTIDPNDSLIRFPKEKDSRCN 246 V+ GD N L ++ + + + F + + + Sbjct: 141 GRKVVVCGDVNTAHTELDIARPKENSKKSGFLPMEREWMDKFEAHGFIDTFRVFEKAGGH 200 Query: 247 ANKNLRN--------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 IDYF + N K L SDHCP+ Sbjct: 201 YTYWDTFTKARERNVGWRIDYFYVSDNLKKNLKGAFIE-----------PDVMGSDHCPV 249 Query: 299 SIDY 302 ID Sbjct: 250 GIDL 253 >gi|121601098|ref|YP_993160.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei SAVP1] gi|121229908|gb|ABM52426.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia mallei SAVP1] Length = 286 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 83/308 (26%), Gaps = 52/308 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 +RL+SWN+ T D A+ L D D++ QE+ Sbjct: 1 MRLISWNVQW-----------RRDANGTVDLARTVDAARGLGDFDVLCAQELTRGFHALP 49 Query: 75 --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 S + A++ + + A+ + + L Sbjct: 50 GGPSGDQYAELAALLPGYAVFDAIGVDLPPLEPGAPRRQFGNALATRLPVERALRHALPW 109 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + + + R A+E+ + + V+ HL+ + + L ++A Sbjct: 110 PASAAAPSMPRCALEVTLRAPFGPLRVVVTHLEYYSA--QQRLAQVDALRRLHREAAAHA 167 Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF------ 237 + PF ++ GDFN D + + Sbjct: 168 RASAPPETPASPFAPSARAADAIVCGDFNSAYRSDAYRRFLAPFPDAPRFVDAWLARHPG 227 Query: 238 --PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 P + + + D+ + + L + R SDH Sbjct: 228 KTPPMTAGVYDTAQWSEGPMTCDFAFVTDTLVRRLSRCEI-----------DGTVRASDH 276 Query: 296 CPISIDYD 303 PI ++ Sbjct: 277 QPIVLELS 284 >gi|325961961|ref|YP_004239867.1| exodeoxyribonuclease III [Arthrobacter phenanthrenivorans Sphe3] gi|323468048|gb|ADX71733.1| Exodeoxyribonuclease III [Arthrobacter phenanthrenivorans Sphe3] Length = 261 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 25/279 (8%), Positives = 64/279 (22%), Gaps = 51/279 (18%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 + + + + D D++ +QE + + + + + Sbjct: 5 RARADRVEAWLQRSDCDVLAIQETKCKDD----------NFPWELFERMGYEVAHFGVNQ 54 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF- 169 +A+ + + L + + + I + +++ + Sbjct: 55 WNGVAIASRVGLEDVERTFLDQPSFGKAGKDPVQEARA-MAATCAGIRIWSLYVPNGRSL 113 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-------------- 215 D L AQ L ++ + GD+N Sbjct: 114 DDEHMPYKLKWLESLKTHAQELV-----TQDPQAQVALMGDWNIAPFDEDVWDIDLFINN 168 Query: 216 ---NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMD 263 + + + ID+ + Sbjct: 169 RSTHVSPPERAAFHAFESAGFTDVVRPYTPGP-GVYTYWDYTQLRFPKKEGMRIDFVLAS 227 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + S D + +GK SDH P+ ++ Sbjct: 228 PALAARVTGASI-------DREERKGKGASDHAPVVVEL 259 >gi|253565090|ref|ZP_04842546.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251946555|gb|EES86932.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 353 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 40/342 (11%), Positives = 92/342 (26%), Gaps = 57/342 (16%) Query: 2 IRKYVLALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKN----------- 45 ++K ++A F L+ AQ + +N+ L + + + Sbjct: 15 MKKLIIAFNFLLLLAVGGRAQDHADRLYSVAFYNLENLFDTIHDTGKNDYEYLPDAAKGW 74 Query: 46 SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + ++ S L + L D + + E+ + + + + + Sbjct: 75 NSEKYRSKLKNLSKVLGELSRDKVPAGPAAIGVAEVENRRVLDDLIRQPE---LAAGGYR 131 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 H + I A+ K + L + + R + + E+ G K+ Sbjct: 132 YIHYEGPDKRGIDCALLYDPKQFTPHATALVLSTPFEGDTIHKTRGFLIVGGELAGDKVC 191 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 ++ H S + + + Q + LKD + + + + +I GD N L Sbjct: 192 LIVNHWPSRGAAEPVRV-------HAAMQVKALKDSLMRT-DPDLKLIIMGDLNDDPMDL 243 Query: 219 GN-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK----- 268 + + + +D D ++ + Sbjct: 244 SLAVLGAKKHVEDMTEDDLYNPWWVTLEDKGVGTLLYRGKWNLFDQIILSPTLLQATKGL 303 Query: 269 -------------FLIQESFSEILYNEDDIKSRGKRLSDHCP 297 F + + SDH P Sbjct: 304 KYDHNEVFMRDYLFQQDGKYKGAPLRTYGGRVWLDGYSDHLP 345 >gi|165870022|ref|ZP_02214679.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0488] gi|190569230|ref|ZP_03022126.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis Tsiankovskii-I] gi|227817848|ref|YP_002817857.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. CDC 684] gi|164714345|gb|EDR19865.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0488] gi|190559670|gb|EDV13659.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis Tsiankovskii-I] gi|227003998|gb|ACP13741.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. CDC 684] Length = 335 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 110/327 (33%), Gaps = 70/327 (21%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T ++ + + +N ++D Sbjct: 33 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 92 Query: 71 LQEMG----------SYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAI 114 LQE+ + + K P + + + N + Sbjct: 93 LQEVDIKSLRSFDVNGHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYA-----EAGL 147 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLD 171 + K + + L G + R + R VE + +N GK + ++++HL + Sbjct: 148 STFSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHSIPVNNGKHVRLVNLHLSA----- 202 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 Y + QQ ++LK+++ + ++ ++ GD+N+ ++ + +D + P Sbjct: 203 -----YDEGGKIRKQQVEFLKEYMNKHYKNGDYVIMGGDWNQLVSDVQLSDPKFVKERPE 257 Query: 232 DSLIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESF 275 + D + ID F++ N ++ Sbjct: 258 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQG 315 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + SDH P+S + Sbjct: 316 KDLKFEN----------SDHNPVSAVF 332 >gi|146340267|ref|YP_001205315.1| exodeoxyribonuclease III [Bradyrhizobium sp. ORS278] gi|146193073|emb|CAL77084.1| exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP endonuclease VI) [Bradyrhizobium sp. ORS278] Length = 262 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 37/300 (12%), Positives = 74/300 (24%), Gaps = 70/300 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN L + + DIV LQE+ A Sbjct: 1 MKIATFNINN----------------VRRRLPNLLAWLRAAKPDIVCLQELKCTLA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +A+ + + L G S R Sbjct: 41 ------EFPVEEIAKAGYGAVWQGQKTWNGVAILARKAEPVLIRTALPGDP---SDKEAR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + I + ++L + + Y + + L + + + Sbjct: 92 YIEAAV-----RGIVIACLYLPNGNPQPGPKFDYKLA------WFKRLHKHAAKFIKDDL 140 Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P V+AGD+N + + ++ D+ Sbjct: 141 PVVLAGDYNVAPTPLDIYPTKSWDKDALIQPKSRAAYAALVNQGWCDAIRTLHPDAPMFT 200 Query: 248 NK-NLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 RN+ +D+ ++ L D SDH P I Sbjct: 201 FWDYKRNRWPRDAGLRLDHLLLSPQLAPRLKTAGV-------DRAIRGEDGASDHAPAWI 253 >gi|330998468|ref|ZP_08322292.1| endonuclease/exonuclease/phosphatase family protein [Paraprevotella xylaniphila YIT 11841] gi|329568574|gb|EGG50379.1| endonuclease/exonuclease/phosphatase family protein [Paraprevotella xylaniphila YIT 11841] Length = 348 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 36/352 (10%), Positives = 96/352 (27%), Gaps = 64/352 (18%) Query: 2 IRKYVLALVFFLVPCTASVAQKVR-----LVSWNINTLSEQEGVSLWKN----------- 45 +++ + + F++ TA+ AQ+ + + +N L + + Sbjct: 1 MKRMFMVMGLFVLLFTAARAQEKKFGMYAVGFYNQENLFDTIHDEGKNDFEYLPDGAMKW 60 Query: 46 SVKRTTSDYTLLRQYAKNLDAD--------IVFLQEMGSYNAVAKVFPKNTWCIFYSTER 97 + + + + + D ++ + E+ + + + + + Sbjct: 61 NGMKYFAKLKNMATVLSEMGTDKLPNVGASVIGVSEVENSRVMQDLVEQPPLK---ARGM 117 Query: 98 LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 H + + A+ + + + S R + + ++ G + Sbjct: 118 KFVHIEGPDRRGVDCALIYNPRFFTPEKSFLQPYIYEAKDSAYHTRGFLTVQGKLAGDDV 177 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 + H S + Q + LKD I++ + ++ GD N Sbjct: 178 AFIVCHWPSRAAVSYYRERAGK-------QVRMLKDSISK-ANPGMKIIVMGDMNDDPFS 229 Query: 218 LGN------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 + + + + D VM N Sbjct: 230 PSMAKALGAKREMKDVGESDLYNPWWNVLTKEGRGTLMYDGKWNLFDQIVMTPNLLNLDG 289 Query: 272 QESFSEILYNEDDIKSRGK-----------------------RLSDHCPISI 300 ++ +S + + + +I SR SDH P+ + Sbjct: 290 KKDYSTLKFFKHEIFSRNYLFQTEGRYKGNTKRTHAGGVWLNGYSDHLPVVV 341 >gi|118617059|ref|YP_905391.1| exodeoxyribonuclease III protein XthA [Mycobacterium ulcerans Agy99] gi|118569169|gb|ABL03920.1| exodeoxyribonuclease III protein XthA [Mycobacterium ulcerans Agy99] Length = 264 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 31/278 (11%), Positives = 63/278 (22%), Gaps = 50/278 (17%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 + + + + D D++ +QE + + + + Sbjct: 5 RTRLPRVLDWLERADVDVLAIQETKCSDT----------QFPALPLFELGYEVAHVGFNQ 54 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 +A+ + Q S A V + V +++ + L Sbjct: 55 WNGVAIASRVGIDDVQISFDGQPAWSGKPEVAAAAEARAVGATCGGVRVWSLYVPNGRAL 114 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINY----------- 217 + TY L+D + P +AGDFN Sbjct: 115 EDPHYTYKLD------WLAALRDTAQCWLKNDPGAPIALAGDFNIAPTDEDVWNTEFFTG 168 Query: 218 ----LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQ 264 + I ID+ + Sbjct: 169 ATRVSEPERKAFNAIVDAQFTDLVRPFTPGP-GVYTYWYYTQLRFPKKQGMRIDFILGSP 227 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + +GK SDH P+ +D Sbjct: 228 ALAGRVVDAQIV-------RDERKGKAPSDHAPVFVDL 258 >gi|329724184|gb|EGG60699.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus 21172] Length = 269 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 79/270 (29%), Gaps = 28/270 (10%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE--------RLINHS 102 +D Y K + D+V E A K+ Y T Sbjct: 5 RADLIGQSSYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQSGWDKTEG 62 Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 S +A+ K + + F N+ V +E NGK I V+ Sbjct: 63 SYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNGKNIHVIGT 121 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKINYLGNN 221 H +S DS + ++Q + + D++ + I GD N Sbjct: 122 HTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNVN-KGTPEF 176 Query: 222 DDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK--FLIQES 274 D K ++ ND L N +DY D++ + L+ E Sbjct: 177 KDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQPKQLVNEV 236 Query: 275 FSEILYNEDDIKSRGKRL----SDHCPISI 300 +E D + SDH PI Sbjct: 237 VTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 266 >gi|312958184|ref|ZP_07772707.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens WH6] gi|311287615|gb|EFQ66173.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens WH6] Length = 292 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 85/292 (29%), Gaps = 58/292 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 ++RL+S+NI + E + + TS+ + D D+V L Sbjct: 28 PADSRLRLLSFNIQVGNSTEKYRHYLTRGWQHVLPHKGRTSNLQKIGDLLN--DFDLVAL 85 Query: 72 QEMGSYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE + + + + R+ + V + + +PL Sbjct: 86 QEADGGSMRSGYINQVEHLAQLGAFPYWYQQLNRNLGRLAQHSNGVLSRLKPTAIEDHPL 145 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G K R A+ + + + V+ +HL + Q + Sbjct: 146 PGPKG-------RGAILVRFGEGPEALVVVMMHLALGG-------------RTRNLQLAY 185 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 +++ I K V+ GD N + N L + Sbjct: 186 VRELIGNYKHQ----VLMGDMNTHATD----------LLQNSPLRDLGLLAPQVEATFPS 231 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + +D+ ++ +Q I SDH P++++ Sbjct: 232 WRPQRCLDHILLSPTLTLESVQVLAHPI--------------SDHLPVAVEI 269 >gi|299142905|ref|ZP_07036032.1| endonuclease/Exonuclease/phosphatase [Prevotella oris C735] gi|298575634|gb|EFI47513.1| endonuclease/Exonuclease/phosphatase [Prevotella oris C735] Length = 313 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 32/256 (12%), Positives = 75/256 (29%), Gaps = 31/256 (12%) Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 D+V L E+ + + + ++ + N S + +A+ Sbjct: 72 PDLVALCEVENDTVMRDLTKRSLLRQARYEYVMTN-----SLDVRGIDVALLYSPFTFRL 126 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 ++ + R + +I +G + V +H S + + Sbjct: 127 LNWHAIRVAPIKGMRPTRDILYAAGQIISGDTLHVFVVHAPSRSGGEIATRPNRMAV--- 183 Query: 185 SQQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 + L++ + K + +IAGDFN + + + + K Sbjct: 184 ---VKRLQEAVDSVKSNSVSARIIIAGDFNDYTQDVSIQYLISRGLTD---VSASAKGTH 237 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------------- 289 K +D+ + + + ++ + D + G Sbjct: 238 GAKGTYKYRGEWGSLDHVLCSEALVPLFRSCTIADFPFLLTDDEVYGGLQPLRNFHGAKY 297 Query: 290 -KRLSDHCPISIDYDF 304 SDH P+ + +DF Sbjct: 298 LNGFSDHLPLVVKFDF 313 >gi|182434884|ref|YP_001822603.1| putative phospholipase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463400|dbj|BAG17920.1| putative phospholipase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 326 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 91/297 (30%), Gaps = 31/297 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R++S+N S+ + + + D+V +QE A Sbjct: 37 SLRVLSYNAFIFSKTLY------PNWGQDHRAAEIPKTSFFRGNDVVVIQEAFDNGASDA 90 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGAK 134 + + Y T + + + K V ++ + + Sbjct: 91 LLRNSASPYPYQTPVVGRSKSGWDATGGSYAAATPEDGGVTILSKWPIVRKEQF-VFKDA 149 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 N+ ++ +NG ++ V+ H +S S + + S+Q + L + Sbjct: 150 CGGDWFSNKGFAYTVLNVNGARVHVVGTHAQSTDPGCSAG----QAAQVRSRQFKQLDAF 205 Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNA----N 248 + + V+AGDFN + + ++ P D+R N+ Sbjct: 206 LDAKNIPASEQVVVAGDFNVDGHAAEYASFLADAGLSAPETRTGHPYSFDTRDNSIAAER 265 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPIS 299 + +D+ + + ++ + S + LSDH P+ Sbjct: 266 YPDDPREDLDHVLHRTGHARPAGWKNEVIKEESAPWTVSSWGKDYTYTNLSDHYPVI 322 >gi|49481107|ref|YP_039092.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49332663|gb|AAT63309.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 352 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 45/322 (13%), Positives = 106/322 (32%), Gaps = 60/322 (18%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T + + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMG----------SYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKK 119 LQE+ + + K P + + + ++ K Sbjct: 110 LQEVDIKSLRSFDVNGHEFLKKGLPNYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTFSK 169 Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176 + + L G + R + R VE + +N GK + ++++HL + Sbjct: 170 YTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---------- 219 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 Y + QQ ++LK ++ + E ++ GD+N+ ++ + +D + P+ + Sbjct: 220 YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPDWLVEL 279 Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280 D + ID F++ N ++ + + Sbjct: 280 PKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKNLKF 337 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 SDH P+S + Sbjct: 338 EN----------SDHNPVSAVF 349 >gi|30265117|ref|NP_847494.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Ames] gi|47778386|ref|YP_021976.2| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49187928|ref|YP_031181.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Sterne] gi|167636557|ref|ZP_02394852.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0442] gi|167641786|ref|ZP_02400028.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0193] gi|170689357|ref|ZP_02880550.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0465] gi|170709101|ref|ZP_02899529.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0389] gi|177655394|ref|ZP_02936892.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0174] gi|229601351|ref|YP_002869310.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0248] gi|254686481|ref|ZP_05150340.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. CNEVA-9066] gi|254735688|ref|ZP_05193395.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Western North America USA6153] gi|254744226|ref|ZP_05201906.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Kruger B] gi|254750980|ref|ZP_05203019.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Vollum] gi|254756978|ref|ZP_05209006.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Australia 94] gi|30259794|gb|AAP28980.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Ames] gi|47552091|gb|AAT34451.2| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. 'Ames Ancestor'] gi|49181855|gb|AAT57231.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. Sterne] gi|167510269|gb|EDR85673.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0193] gi|167528030|gb|EDR90833.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0442] gi|170126003|gb|EDS94902.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0389] gi|170666653|gb|EDT17423.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0465] gi|172080145|gb|EDT65239.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0174] gi|229265759|gb|ACQ47396.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0248] Length = 352 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 110/327 (33%), Gaps = 70/327 (21%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T ++ + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMG----------SYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAI 114 LQE+ + + K P + + + N + Sbjct: 110 LQEVDIKSLRSFDVNGHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYA-----EAGL 164 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLD 171 + K + + L G + R + R VE + +N GK + ++++HL + Sbjct: 165 STFSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHSIPVNNGKHVRLVNLHLSA----- 219 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 Y + QQ ++LK+++ + ++ ++ GD+N+ ++ + +D + P Sbjct: 220 -----YDEGGKIRKQQVEFLKEYMNKHYKNGDYVIMGGDWNQLVSDVQLSDPKFVKERPE 274 Query: 232 DSLIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESF 275 + D + ID F++ N ++ Sbjct: 275 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQG 332 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + SDH P+S + Sbjct: 333 KDLKFEN----------SDHNPVSAVF 349 >gi|320158549|ref|YP_004190927.1| hypothetical protein VVM_01457 [Vibrio vulnificus MO6-24/O] gi|319933861|gb|ADV88724.1| hypothetical protein VVMO6_03702 [Vibrio vulnificus MO6-24/O] Length = 322 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 44/318 (13%), Positives = 102/318 (32%), Gaps = 39/318 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + + S N+ G + + T L + ++AD+V QE+ S +A+ Sbjct: 2 ITIASCNLFNFLAPPGAYYEFSNILTDNEWNKKTTWLTLQLRAINADVVAFQEVFSPDAL 61 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-------GA 133 + + ++ + + + AIA R + + Sbjct: 62 NTLTSDLGYP-YFVCLDTPHVTDEFIYSKPVLAIASRWPVIESRLVRFKDCFGDYSENSD 120 Query: 134 KDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSL--------- 183 ++++ +R + ++E+ + V+ +HLKS + + Sbjct: 121 SVTYNKEFSRLPLHAVIELPIIGLCDVITLHLKSQRPTRWQTQQIDQADNTPPSDPVGSW 180 Query: 184 -----LSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP------N 231 +A L +I + P VI GDFN IN ++ P + Sbjct: 181 LSTVQRGWEAVLLSQYIKKIYASHARPMVIMGDFNANINSTELKPLIDESNTPLLKDVRD 240 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD------I 285 + +++ + + + +DY ++ + + Q+ D Sbjct: 241 WLREQPIFSDEAQKATHYHGSQGLILDYLLLSEEFAQQNAQQRGKITHLVVWDKHLVNPS 300 Query: 286 KSRGKRLSDHCPISIDYD 303 + SDH +++ D Sbjct: 301 FEVDQFASDHAFVAVTID 318 >gi|258620504|ref|ZP_05715542.1| Nuclease-related protein [Vibrio mimicus VM573] gi|258587383|gb|EEW12094.1| Nuclease-related protein [Vibrio mimicus VM573] Length = 869 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 50/373 (13%), Positives = 95/373 (25%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R S+ + LDADIV L E Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGGNRGASNLAEFEVQQAKIVNAIVRLDADIVGLME 532 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116 + + S R D I T + Sbjct: 533 IENNGFGEGSAIAQLVNQLNSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162 R K V++ Q + ++ + R + ++ G KI V Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652 Query: 163 HLKS--------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL------ 202 HLKS + + A L D + + Sbjct: 653 HLKSKGSACWEDAAPVEQGGQGGQDLDYQGACENFRVAAAVALGDALGKIDGHKVILGDM 712 Query: 203 ------VPFVIAGDF-------------NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 P ++ D+ N I + D I + + K Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDAGAEIKHSYGYLNAVAMKHP 772 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290 + +D+ ++ + ++ + I E + Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKTKVVDATDWHINGAESTLFDYNDEFKGNLPKYNDQF 832 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 833 RASDHDPAVLELN 845 >gi|189184130|ref|YP_001937915.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda] gi|189180901|dbj|BAG40681.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda] Length = 261 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 32/306 (10%), Positives = 71/306 (23%), Gaps = 72/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++++WNIN LL++ + DI+ LQE ++ Sbjct: 1 MKIITWNIN----------------SVRMRIPLLQRLVHLYNPDIIALQE---TKVEDRL 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP L S + +A+ + L + Sbjct: 42 FP------VTECINLGYKYITYSGQKSYNGVAILSRISFESTFVINLYNGEKR------- 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + IN ++ + + ++ + D + ++ W K Sbjct: 89 -----HIAINIGELSIHNFYVPAG--GDIPNANVNIKFKHKLCYVDFMNAWFLNNKSKKD 141 Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N I D + Sbjct: 142 KIILLGDLNIAPLESDVWSSYQLRNVVSYTDIERKKLMHNITSFDWIDAVRFFSGKHEKL 201 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + SDH P Sbjct: 202 YSWWSYRNVDWSKFDRGRRLDHIWISHPLESKIKSCIII-------KDARGWDMPSDHVP 254 Query: 298 ISIDYD 303 + ++ + Sbjct: 255 VMLEIE 260 >gi|332291514|ref|YP_004430123.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus 4H-3-7-5] gi|332169600|gb|AEE18855.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus 4H-3-7-5] Length = 358 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 37/324 (11%), Positives = 76/324 (23%), Gaps = 58/324 (17%) Query: 25 RLVSWNINTLSEQ-------EGVSLWKNSVKRTTSDYT----LLRQYAKNLDAD------ 67 + +N+ L + + + T Y + + ++ D Sbjct: 36 TIAFYNVENLFDTINDPITYDDDRTPEGKDHWTEKIYQDKVSNIARVIADIGKDVTKNSP 95 Query: 68 -IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV---RV 123 I+ L E+ + V + + I H I A+ +K+ Sbjct: 96 AIIGLAEIENRKTVEALANDPQ---LLPRDYGIVHYDSPDRRGIDVALLYQKRLFKPLFT 152 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + + + R R + + ++G I ++ H S ++ Sbjct: 153 SKHELLIYEIDNPSKRKYTRDQLLVSGLLDGDMIHIIVNHWPSRSGGEAKSRKKRMD--- 209 Query: 184 LSQQAQWLKDWITQKKESLVP---FVIAGDFNRKINYLGNNDDFW-----KTIDPNDSLI 235 A L IT ++ P +I GD N K + + Sbjct: 210 ----AASLTKKITDSLQNNDPYAKIIIMGDLNDDPTNASVKKVLQTQRKIKKVRDKELYN 265 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK------FLIQESFSEILYNEDDIKSRG 289 D ++ + Y + Sbjct: 266 PMESMFKKGIGTLAYRDGWNLFDQIIISAPLLDDDYTSFRYYKAGIYNKSYLSNPKGRYK 325 Query: 290 KRL-------------SDHCPISI 300 SDH P+ I Sbjct: 326 GYPYRSFANGGYTGGYSDHFPVYI 349 >gi|258625717|ref|ZP_05720596.1| Nuclease-related protein [Vibrio mimicus VM603] gi|258581955|gb|EEW06825.1| Nuclease-related protein [Vibrio mimicus VM603] Length = 869 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 49/373 (13%), Positives = 96/373 (25%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R S+ + LDADIV L E Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGGNRGASNLAEFEVQQAKIVNAIVRLDADIVGLME 532 Query: 74 MGSY-----NAVAKVFPKN---------TWCIFYSTERLINHSKRDSNND---IHTAIAV 116 + + +A+A++ + + + + I T + Sbjct: 533 IENNGFGEGSAIAQLVNQLNNQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162 R K V++ Q + ++ + R + ++ G KI V Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652 Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211 HLKS + L Q + VI GD Sbjct: 653 HLKSKGSACWEDAAPVEQGGQGGQDLDYQGACENFRVAATVALGDALSKIDGHKVILGDM 712 Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243 N D I + + K Sbjct: 713 NSYGMEDPMLILTDYTPEKYGKTIRAARNTYIAGVEQFGDAGAEIKHSYGYLNAVAMKHP 772 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290 + +D+ ++ + ++ + I E + Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKTKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 833 RASDHDPAVLELN 845 >gi|170665740|gb|ACB29409.1| apurinic endonuclease-redox protein [Arabidopsis thaliana] Length = 538 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 42/317 (13%), Positives = 86/317 (27%), Gaps = 76/317 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE- 73 P + V++++WN+N L + Q A+ + DI+ LQE Sbjct: 267 PPLPEGTKCVKVMTWNVNGLRGLLKFESFSA------------LQLAQRENFDILCLQET 314 Query: 74 ---MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 + + K F+S + ++ A+ + + + Sbjct: 315 KLQVKDVEEIKKTLIDGYDHSFWS---------CSVSKLGYSGTAIISRIKPLSVRYGTG 365 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQ 189 L D R V ++++ ++ + L L LS + Sbjct: 366 LSGSD--HDTEGRI-----VTAEFDSFYLINTYVPNSGDGLKRLSYRIEEWDRTLSNHIK 418 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP---------------NDSL 234 L+ P V+ GD N + + + Sbjct: 419 ELEK--------SKPVVLTGDLNCAHEEIDIFNPAGNKRSAGFTEEERQSFGANFLDKGF 470 Query: 235 IRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + +++ + +DYF++ Q+ + D Sbjct: 471 VDTFRKQHPGVVGYTYWGYRHGGRKTNKGWRLDYFLVSQSIAANVH-----------DSY 519 Query: 286 KSRGKRLSDHCPISIDY 302 SDHCPI + Sbjct: 520 ILPDINGSDHCPIGLIL 536 >gi|170782595|ref|YP_001710928.1| hypothetical protein CMS_2252 [Clavibacter michiganensis subsp. sepedonicus] gi|169157164|emb|CAQ02344.1| conserved hypothetical protein [Clavibacter michiganensis subsp. sepedonicus] Length = 264 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 35/283 (12%), Positives = 73/283 (25%), Gaps = 37/283 (13%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AVAKV 83 +++ NI + R L ++ + ++ +QE S A+A+ Sbjct: 3 VMTCNIRLARPSTEPGDPDHWADREPV----LARFLQLEQPTVLGVQEALSAQLPAIARA 58 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P + + ++ + + P L S+ + R Sbjct: 59 LPHHRMLGYGRDGGSGGEYSAIFYDERRLDVVAWDQF---WLSDLPELIGSRSWGCSTTR 115 Query: 144 RAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 A +G + L+ HL S + A + + + + Sbjct: 116 IATWARFRDRRSGAEFVHLNTHLDH------------ESELARVKSADLITERLQEVAS- 162 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK----IPI 257 P V+ GDFN D + D+ + I Sbjct: 163 GAPVVVTGDFNAPAEESAAYDILTRDAGLADTWTTAAHHATPGIGTFTAYGDPVPEGERI 222 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 D+ + + + G+ SDH + Sbjct: 223 DWILAGD---------GVEVVDSAINPYTYEGRSPSDHAAVQA 256 >gi|302186656|ref|ZP_07263329.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae 642] Length = 233 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 77/256 (30%), Gaps = 41/256 (16%) Query: 54 YTLLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFY----STERLINHSKRDSN 107 LR+ + + ADIVFLQE+ + +V T + S + + Sbjct: 12 LPELREAVRTVSADIVFLQEVHGEHQSHARRVKDWPTISQYEFLADSMWSDFAYGRNAVY 71 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 D A+ K + ++ + S R + ++E+ V + + Sbjct: 72 PDGDHGNALLSKYPIIQHENLDI-----SIHGTEQRGLLHCILEVPHAG-RVHAVCVHLG 125 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 S QQ + L + + + P ++AGDFN + Sbjct: 126 LR-----------ESHRRQQLKLLNELMAR-IPEGEPVIVAGDFNDWRQRADE------S 167 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + + F + + + + +D + S Sbjct: 168 LQGSGLHEVFVERFGAPAKSFPARWPLLRLDRIYVRNATSHRPKVLS-----------SR 216 Query: 288 RGKRLSDHCPISIDYD 303 LSDH P++++ Sbjct: 217 PWSHLSDHAPLAVELT 232 >gi|242277753|ref|YP_002989882.1| exodeoxyribonuclease III [Desulfovibrio salexigens DSM 2638] gi|242120647|gb|ACS78343.1| exodeoxyribonuclease III [Desulfovibrio salexigens DSM 2638] Length = 255 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 76/304 (25%), Gaps = 73/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N + ++ + +AD+V +QE A Sbjct: 1 MKIYSWNVNGYRAVIKKNFN---------------EWFEQSNADVVMIQE---TKAHPDQ 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P I ++ A + + G D + R Sbjct: 43 IPDKNRNIEGYESLWNWSKV----KKGYSGTACFTRQPVLSHS----FGLTDEKYQGEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ ++ +I+ + D + A+ L+ Sbjct: 95 VVLM-----EYEQFYLFNIYYPNGQMSDERLEYKMGFYDSFLEYAEELRK--------KK 141 Query: 204 PFVIAGDFNRKINYLGNNDDFWKT-------IDPNDSLIRFPKEKDSRCNA-------NK 249 P V+ GDFN + + + I+ Sbjct: 142 PIVVGGDFNTAHKEIDLKNPKANSERSGFLPIERAWLDKFIEHGYVDTFRMFDDSPGKYS 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF + + + SDHCPI I Sbjct: 202 WWSYRFNARKNNAGWRIDYFFVSEELKHNVKNAWIE-----------SDIMGSDHCPIGI 250 Query: 301 DYDF 304 + F Sbjct: 251 ELSF 254 >gi|189465268|ref|ZP_03014053.1| hypothetical protein BACINT_01614 [Bacteroides intestinalis DSM 17393] gi|189437542|gb|EDV06527.1| hypothetical protein BACINT_01614 [Bacteroides intestinalis DSM 17393] Length = 368 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 82/294 (27%), Gaps = 48/294 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++S+NI +G + Y KN ADI+ LQE + + Sbjct: 102 NSFKVLSYNIMGF---DGAVKKDGENP--------ILNYLKNSGADILCLQEYQTIESSH 150 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + K+ S IA K + + + + + Sbjct: 151 YLSQKDVEKA-LKDYPYHKIQTVGSGKGHTNRIACYSKYPILSSRRLDYVSEYNGSAVYE 209 Query: 142 NRRAVELLVEING---------KKIWVLDIHLKSFCFLDSLENTY------SPSCSLLSQ 186 + + ++ IN + V + LKS + + ++ Sbjct: 210 LKIGEDTVMLINNHLESNKLTKEDKVVYESMLKSPETKKVKSGARLLIRKLAEASAIRGS 269 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 QA + I ++ GDFN + + ++ F + Sbjct: 270 QADSIAQKIA--ASQHPYIIVCGDFNDTPISYA-HRVIGQGLND-----TFTQSGRGLGI 321 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + ID + +N + + R + SDH PI Sbjct: 322 SYNQNKFYFRIDNILASKNLKSY-------------NCTVDRSIKESDHYPIWC 362 >gi|77458095|ref|YP_347600.1| exodeoxyribonuclease III [Pseudomonas fluorescens Pf0-1] gi|77382098|gb|ABA73611.1| putative exodeoxyribonuclease [Pseudomonas fluorescens Pf0-1] Length = 264 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 81/304 (26%), Gaps = 70/304 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +K+R+ ++N+N L + L ++ + DIV LQE Sbjct: 2 KKMRIATFNVNGL----------------RARLPNLLEWLRREQPDIVCLQE-------- 37 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +A+ ++ + L+ L G D Sbjct: 38 --LKMLDSAFPAADLEAAGYGAIWHGQASWNGVAILARDAQPLESRRGLPGDPDDKHSRY 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 AV ++ V ++L + + Y + + L + + S Sbjct: 96 LEAAVHGVL--------VGCLYLPNGNPQPGPKFDYKLA------WFERLIKYARDLQSS 141 Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246 P V+AGD+N L + ++ + Sbjct: 142 DHPVVLAGDYNVVPTDLDIYNTRSWLKDALLQPESRECYQRLLDQGWTDSLRHLYPEDRL 201 Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ +++ +L + D SDH P Sbjct: 202 YTFWDYFRQHWQKNSGLRIDHLLLNPTLSPYLHEAGV-------DAWVRNEPHASDHAPT 254 Query: 299 SIDY 302 I Sbjct: 255 WIRI 258 >gi|304385589|ref|ZP_07367933.1| exodeoxyribonuclease III [Pediococcus acidilactici DSM 20284] gi|304328093|gb|EFL95315.1| exodeoxyribonuclease III [Pediococcus acidilactici DSM 20284] Length = 251 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 75/304 (24%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L LDADI +QE Sbjct: 1 MKLISWNVNGLRAAVKHGF---------------LDVFNELDADIFCVQETKLQEG-QID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + AV K V + D R Sbjct: 45 LDLPGYHQYWNYAEKKGY----------SGTAVFTKREPVAVSYGLGIPEFDQEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +K +++ + + + + L D Sbjct: 91 -----VITLEYEKFFLVTCYTPNSQPELRRLDYRMNWDDAFRAYVKQLAD--------TK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + + + Sbjct: 138 PVIFCGDLNVAHEEIDLKNDRTNHHNAGFTDEERQKFTELLQSGFTDTYRYFYPDKEGVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV Q K L ++ SDHCPI Sbjct: 198 SWWSYRFNARANNAGWRIDYFVTSQALDKQLADAKIHTEIF-----------GSDHCPIE 246 Query: 300 IDYD 303 +D + Sbjct: 247 LDLN 250 >gi|119226210|ref|NP_001073171.1| tyrosyl-DNA phosphodiesterase 2 [Danio rerio] gi|102230105|gb|ABF70183.1| Ttrap [Danio rerio] Length = 369 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 91/294 (30%), Gaps = 48/294 (16%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + K+ ++SWN++ L + L Y D+VFLQE+ Sbjct: 116 SEVEDSKLSIISWNVDGLDTLNLADRARG-----------LCSYLALYTPDVVFLQEL-- 162 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + + S++ T I +RK V+ L+ Sbjct: 163 ---------IPAYVQYLKKRAVSYLFFEGSDDGYFTGIMLRKSRVKFLESEIICFPTT-- 211 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R + V +G+K++++ HL+S ++Q + + I Sbjct: 212 ---QMMRNLLIAQVTFSGQKLYLMTSHLESC----------KNQSQERTKQLRVVLQKIK 258 Query: 197 QKKESLVPFVIAGDFNRKINY-------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + + AGD N + D W+ + + R+ + + N Sbjct: 259 E-APEDAIVIFAGDTNLRDAEVANVGGLPAGVCDVWEQLGKQE-HCRYTWDTKANSNKTV 316 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ D + K + + + G+ SDH I ++ Sbjct: 317 PYVSRCRFDRIFLR--FAKTRPAVTPDHMALIGMEKLDCGRYTSDHWGIYCTFN 368 >gi|319899428|ref|YP_004159525.1| exodeoxyribonuclease III [Bartonella clarridgeiae 73] gi|319403396|emb|CBI76964.1| exodeoxyribonuclease III [Bartonella clarridgeiae 73] Length = 272 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 33/307 (10%), Positives = 81/307 (26%), Gaps = 72/307 (23%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--AKV 83 + +WNIN + + QY DI+ LQE + + + Sbjct: 5 IATWNIN----------------SIRFRLSQVLQYLDICSVDILCLQETKCSDDLFPREF 48 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + + + +A+ + V + +D Sbjct: 49 FEAAGYQYIA-----------LNGQKSYHGVAIISRLPFVSVEKRFFCHKEDCRH----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +++E++G++I + + ++ + D + + + + I +E + Sbjct: 93 --LSVVIELHGRRIRIHNFYIPAG--GDEPDVNKNEKFRHKLDFLEEMSS-IRADQEDGL 147 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N + + + + Sbjct: 148 ESLLLGDLNIAPLPEDVWSHKQLLKVVSHTPIETERLQALCREGGWVDLMRMKFPVPIKL 207 Query: 248 NKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ N F+ + SDH P Sbjct: 208 YTWWSYRARDWALADRGRRLDHVWSSPNLAAFVKD-------LVIFRDARGWSQPSDHVP 260 Query: 298 ISIDYDF 304 + +DF Sbjct: 261 VQTLFDF 267 >gi|226222950|ref|YP_002757057.1| hypothetical protein Lm4b_00342 [Listeria monocytogenes Clip81459] gi|225875412|emb|CAS04109.1| Hypothetical protein of unknown function [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 257 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 40/282 (14%), Positives = 74/282 (26%), Gaps = 36/282 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + ++NI K TL + D + ++E + Sbjct: 2 FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEEPLLPQMCD-M 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 W F + ++ + + P + + S + R Sbjct: 54 KEMQDWDYFGVGRDDGFEKGEFTAVFYNSTRFILLQEGHFWLSETPEVPSIHSTAM-FPR 112 Query: 144 RAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 V +E +GK+ ++ + HL A L + Sbjct: 113 ICVWGKLEDSTDGKQFYIFNTHLDHIS-------------EEARLFASQLLLHKASLIQE 159 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPID 258 +P ++ GDFN + + N + D K + + LR ID Sbjct: 160 DLPVILLGDFNTEPSTPTYNLITQRYQDAQLLSKTPVKGPLGSFHDFQPLRPESELEKID 219 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 Y + F Y + G SDH P+ Sbjct: 220 YIFVSNE---------FHICSYETSTDEIDGCSASDHFPVMA 252 >gi|71736423|ref|YP_275358.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298487634|ref|ZP_07005675.1| Endonuclease/exonuclease/phosphatase family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71556976|gb|AAZ36187.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157726|gb|EFH98805.1| Endonuclease/exonuclease/phosphatase family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 242 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 85/286 (29%), Gaps = 51/286 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----GSYNA 79 + +++ N++ LR+ + + ADIVFLQE+ S+ Sbjct: 1 MNVLTMNMHMGFGIFNRRF----------ILPELREAVRTVSADIVFLQEVHGEHQSHAR 50 Query: 80 VAKVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 K +P + F + + + + D A+ K + ++ + S Sbjct: 51 SVKDWPTISQYEFLADSMWNDFAYGRNAVYPDGDHGNALLSKYPIIQHENLDI-----SI 105 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R + ++E+ V + + S QQ L + + + Sbjct: 106 HGTEQRGLLHCILEVPYAG-RVHAVCVHLGLR-----------ESHRRQQLNLLAELMER 153 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 P ++AGDFN ++ F + + + + + Sbjct: 154 -LPEGEPVIVAGDFNDWRQRAD------ALLEGTGLHEVFVERFGAPAKSFPARWPLLRL 206 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + S LSDH P++++ Sbjct: 207 DRIYVRNATSHRPKVLS-----------SRPWSHLSDHAPLAVELT 241 >gi|320582065|gb|EFW96283.1| Component of the CCR4-NOT transcriptional complex [Pichia angusta DL-1] Length = 762 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 43/329 (13%), Positives = 94/329 (28%), Gaps = 42/329 (12%) Query: 17 TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 +++ + L+S+N + + + L + +I+ LQE+ Sbjct: 413 SSTSSNSFTLMSYNTLCQHYATPKFFKYTPSWALAWEYRRQKLTDEILSYKTNIICLQEV 472 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRKKNVRVLQQSYPL 130 + P + S + ++ ++ + A + ++ + Sbjct: 473 ETKTYEEYWVPLMESNGYKSVFHCKSRARTMNDKNAKKVDGCATFFQTSMFELIDKKIIE 532 Query: 131 LG-----------AKDSFSRAGNRR----AVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 G +D F+R N+ L G KI + + HL + ++ Sbjct: 533 YGRVVMTQDKYKKTEDIFNRFMNKDNIASISILQHIPTGNKIVLANTHLHWDPEFNDVKT 592 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN--------------- 220 + L + LK ++ + + +P VI GDFN + + Sbjct: 593 -MQVAVLLEELRVLLLKYTNSKDELNKIPLVICGDFNSQTDSAVYQLFSQGSVKEHYDIK 651 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSR----CNANKNLRNKIPIDYFVMD-QNAYKFLIQESF 275 D+ K + K N + I+Y + Sbjct: 652 GRDYGKFTSEGCTHPFHLKSAYGAINELPFTNFSPTYTNVIEYIWYSTGTLSVRGLLGEM 711 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +SDH P+ ++F Sbjct: 712 DPNYAKRVIGLPSADFVSDHLPLISKFEF 740 >gi|89889838|ref|ZP_01201349.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7] gi|89518111|gb|EAS20767.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7] Length = 329 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 34/331 (10%), Positives = 78/331 (23%), Gaps = 63/331 (19%) Query: 22 QKVRLVSWNINTLSEQEGV-----------SLWKNSVKRTTSDYTLLRQYAKNLD----- 65 ++ + +N+ L + + + +R L + Sbjct: 9 EQYTVAFYNLENLFDVHNDEHILDEDFTAQGRKQWTPQRYQKKLQKLSDAISKVGVLQTG 68 Query: 66 --ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 I+ + E+ + + + + + I H I A+ RKK V Sbjct: 69 KLPAIIGVAEVENKKVLEDLIEQPK---LVKGDYGIIHYNSPDERGIDVALLYRKKLFTV 125 Query: 124 LQQSYPLLGAKDSFSRA-GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 S + R + + ++G + + H S N Sbjct: 126 ESSSPIAVDVTMPNDEPDRTRDILYVKGFLSGMPLHLYVNHWPSRRDGAQSTN------E 179 Query: 183 LLSQQAQWLKDWITQKKESLVP------------FVIAGDFNRKINYLGNNDDFWKTIDP 230 A+ L + ++ GDFN ++ Sbjct: 180 KRVTVAKQLMSHVNNVDPHNDRTNQEKHLLEGTNIIVMGDFNDDPENDSIRNEILPYGFQ 239 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE----------------- 273 N + + S + K D ++ + + Sbjct: 240 NVTAPLKKFHRGSLNHNFKWNLF----DQIMVSDSLINDVPDALYFHQADIFDDIMLRQW 295 Query: 274 --SFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ++ SDH P+ + Sbjct: 296 KGKYRGQPARTFVGRTYKGGYSDHFPVYMIL 326 >gi|301612062|ref|XP_002935554.1| PREDICTED: deoxyribonuclease-1-like isoform 1 [Xenopus (Silurana) tropicalis] Length = 353 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 88/301 (29%), Gaps = 29/301 (9%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 L ++ + C ++ S+NI S LL + + Sbjct: 3 LLVLVAVTACFLQAGFSFKIASFNIQRFSMT---------KVDDPVVLELLIRILSRYE- 52 Query: 67 DIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 ++ ++E+ A+ + + + + LI+ S+ A R+ V+ + Sbjct: 53 -VIAIEEVMNADNTAIISLVKELSLATKLNYNVLISDHLGRSSYREKYAYIYREDIVKPV 111 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + + G ++ + + R + + S + +L Sbjct: 112 EWYHYDDGCENCGTDSFIREPFVARFT----SLTTVVKDFALISIHTSPDYAVMEVDALY 167 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + + +I GD+N +Y+ + + L +K+ Sbjct: 168 DAWVDAKQRL------KMENILILGDYNAACSYVAARHWPIIRLRHAEELAWLIGDKEDT 221 Query: 245 CNANKNLRNKIPIDYFVMDQ-NAYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISID 301 + D V +I + Y+ + K +SDH PI ++ Sbjct: 222 TVSTNTN---CAYDRMVAGGQQLQSGIIPGTAKAFNYHVAYDLTYEMAKAVSDHYPIEVE 278 Query: 302 Y 302 Sbjct: 279 L 279 >gi|298706356|emb|CBJ29365.1| potential endonuclease [Ectocarpus siliculosus] Length = 696 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 38/328 (11%), Positives = 90/328 (27%), Gaps = 64/328 (19%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 AS ++ R+++WNIN L + ++Q +ADIV QE+ Sbjct: 18 ASAEREARILTWNINGLRKVAASHGG-------------VQQLLDQFNADIVCFQEIKIT 64 Query: 78 NA---VAKVFPKNTWCIFYSTERLI---NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 A ++ + F++ +L ++S + + + + ++ Sbjct: 65 RAGLVEHELARAQGYHGFFNHCKLPRKVSYSGVATFVRSESGLKTLASTTSLGDSAFFGS 124 Query: 132 GAKDSFSRAGNRRAVEL------LVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLL 184 R + + ++ + + +++ D + + Sbjct: 125 PGSFVGERRLSPDRLAALDSEGRVLVTDHGHFVLFNVYAPCVSSSSDDEKEKTEDRRAFK 184 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--------------DDFWKTIDP 230 L+ I + + V+ GD N + L + + Sbjct: 185 RDFLATLEARIFEIRSRGRGVVLVGDLNACASQLDHGFTMTDSEFYASNWSKWIRGMLGL 244 Query: 231 NDS----------LIRFPKEKDSRCNANKN----LRNKIPIDYFVMDQNAYKFLIQESFS 276 + ++ C + IDY + + ++ Sbjct: 245 GSPEPPRLVDCFRHLHPDRKSAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRA--- 301 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYDF 304 SDHCP+ + F Sbjct: 302 -------CDIMPDFLGSDHCPVRARFAF 322 >gi|260597181|ref|YP_003209752.1| hypothetical protein CTU_13890 [Cronobacter turicensis z3032] gi|260216358|emb|CBA29386.1| Uncharacterized protein ybhP [Cronobacter turicensis z3032] Length = 270 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 38/287 (13%), Positives = 75/287 (26%), Gaps = 51/287 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + +++ N + LR + + ADIV LQE+ + V Sbjct: 26 SLNVLTINTHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 75 Query: 83 V----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P T F + +++ + H AV + S Sbjct: 76 LHVENWPDTTHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 130 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R + + G + I + + Q L + + Sbjct: 131 VPGTEKRGVLHCRITPPGFPKAIHVICVHLGL-----------KEAHRQAQLMMLAELVN 179 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI-RFPKEKDSRCNANKNLRNKI 255 P V+AGDFN + + L F + + Sbjct: 180 S-LPEGEPVVVAGDFNDW------RQQANRILRKEAGLDEVFTRAHGRPARTFPVSFPLL 232 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + + + LSDH P++++ Sbjct: 233 RLDRIYVKNASAS-----------APTALPLRNWRHLSDHAPLAVEI 268 >gi|209694862|ref|YP_002262790.1| hypothetical protein VSAL_I1331 [Aliivibrio salmonicida LFI1238] gi|208008813|emb|CAQ79016.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238] Length = 338 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 45/329 (13%), Positives = 94/329 (28%), Gaps = 50/329 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + + + N+ E + + + L++D++ QE+ S Sbjct: 5 ESITFTTINMFNFVEPPNAYYDFENILTQEEWQKKQDWFKNRITTLNSDVIGFQEVFSPE 64 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKDSF 137 A+ + + F + + + + A A R V + A+ Sbjct: 65 ALEALVNSLGYPYFCTVDEPKSEDG-YVFHSPVVAFASRYPIVSSQPVIAKSEQLARFGI 123 Query: 138 SRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSP----------------- 179 NR V +++ + +H KS D +E Sbjct: 124 EFEFNRVPVHASIDLPHLGVTDCYVVHFKSQRPKDPIEIDGIEEPESTPLTQLHDEQLGS 183 Query: 180 --SCSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 S + +A L +I TQ+K+S P V+ GDFN+ + + + + Sbjct: 184 WLSSAQRGLEANTLHQYITTQRKKSSQPVVLMGDFNKPLFHNEFIGLLSHQLRYDKFSTD 243 Query: 237 F------------------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 + + R + + +DY ++ Sbjct: 244 YLTTFQLKDSWDIYSQLKGTDLLEERVSTHYYGAKGSVLDYILLSNEFDSSYSGSLLEVT 303 Query: 279 LYNEDDI------KSRGKRLSDHCPISID 301 Y D+ + +DH +SI Sbjct: 304 EYRVVDLHIVNPRFDIDQFSTDHALVSIT 332 >gi|196039392|ref|ZP_03106697.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus NVH0597-99] gi|196029552|gb|EDX68154.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus NVH0597-99] Length = 352 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 46/322 (14%), Positives = 105/322 (32%), Gaps = 64/322 (19%) Query: 21 AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++ ++NI G +S ++T + + + +N ++D LQ Sbjct: 52 GNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFALLQ 111 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVRKK 119 E+ + + F N S + + ++ K Sbjct: 112 EVDIKSM--RSFDVNGHEFLKKGLPDYASSFGKNYDTKWVPVPVTSPMGYAEAGLSTFSK 169 Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176 + + L G + R + R VE + +N GK + ++++HL + Sbjct: 170 YTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---------- 219 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 Y + QQ ++LK ++ + E ++ GD+N+ ++ + +D + P + Sbjct: 220 YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWLVEL 279 Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280 D + ID F++ N ++ ++ + Sbjct: 280 PKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 337 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 SDH P+S + Sbjct: 338 EN----------SDHNPVSAVF 349 >gi|257437815|ref|ZP_05613570.1| exodeoxyribonuclease III [Faecalibacterium prausnitzii A2-165] gi|257199738|gb|EEU98022.1| exodeoxyribonuclease III [Faecalibacterium prausnitzii A2-165] Length = 263 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 77/305 (25%), Gaps = 77/305 (25%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 Q ++L+SWN+N L LDADI +QE A Sbjct: 12 QDMKLISWNVNGLRACLTHDF---------------AASFAALDADIFSVQETKMQPGQA 56 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 P+ YS E ++ A K + + D R Sbjct: 57 DFAPEGYTEYTYSAE-----------KKGYSGTACWCKTAPLAVTTGIGREEHDHEGR-- 103 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 L +E G ++++ + + + ++ + ++ Sbjct: 104 -----VLTLEYPG--FYLVNCYTPN-------SQDGLKRLDYRMTWEDAFRAYLLE-LDA 148 Query: 202 LVPFVIAGDFNRKINYLGNNDD----FWKTIDPNDSLIRFPKEKDSRCNA---------- 247 P ++ GD N + + + + Sbjct: 149 KKPVILCGDLNVAHTEIDIKNAKTNRMSAGFTDQERAKMTELLAAGFTDTFRAVHPDEVK 208 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF++ + ++ SDHCP+ Sbjct: 209 YSWWSYRFHAREKNAGWRIDYFIVSNRIADKVTAAEIHNEVF-----------GSDHCPV 257 Query: 299 SIDYD 303 + D Sbjct: 258 ELVID 262 >gi|109066841|ref|XP_001103689.1| PREDICTED: endonuclease/exonuclease/phosphatase family domain-containing protein 1-like isoform 1 [Macaca mulatta] Length = 569 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 35/296 (11%), Positives = 77/296 (26%), Gaps = 35/296 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+ S V N R TLL K ++ +QE+ A+ K Sbjct: 261 LRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 311 Query: 84 FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKK-NVRVLQQSYPL 130 + + + + V + Sbjct: 312 CTELNQPTLPNMRKWKGPRGCWKAVVAEKPSNQLQKGAGYAGFLWDAAAGVELRDAGSQE 371 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + + ++ + ++++HL + S + + S Sbjct: 372 SSPSNGHGKPAGPSPYLARFKVGSHDLTLVNLHLAALTLPGSENPSKNHSDGHR---LAS 428 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + + + +I GDF + + + I + + KN Sbjct: 429 FAQTLQETLKGEKDVIILGDFGQGPDSNDYD------ILRKEKFHHLIPAHTFTNISTKN 482 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302 + +D + ++ K I S+HCP+ + Sbjct: 483 PQGSKSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEL 538 >gi|83953799|ref|ZP_00962520.1| hypothetical protein NAS141_06228 [Sulfitobacter sp. NAS-14.1] gi|83841744|gb|EAP80913.1| hypothetical protein NAS141_06228 [Sulfitobacter sp. NAS-14.1] Length = 235 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 77/280 (27%), Gaps = 55/280 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 R+ S+N+ + D + + + L ADIV LQE Sbjct: 5 PFRIASYNMRKAMGTDR-----------KRDPARILRVIQTLTADIVVLQEADMRLGPRP 53 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + S A+ +R + + + L G Sbjct: 54 SALPLDQVTAQTGLIAVPVPSEVSIGWHGNAVLLRPEAELIEVKHLNLPGM-------EP 106 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R A+ + ++ + ++ HL Q L + + S Sbjct: 107 RGAMVVDFDLRDIPLRIIATHLGL-------------MRRSRRAQLSALIAHLDAQ--SK 151 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 P +IAGD N +G + + + + +D + Sbjct: 152 RPTLIAGDMNEWSLNVGLGRLAHQF------------DIYAPGKSYHARLPLAALDRIAV 199 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D +I E +R SDH PI +D+ Sbjct: 200 DDAL--HVIDGGVCET--------DDARRASDHLPIWLDF 229 >gi|329964785|ref|ZP_08301808.1| exodeoxyribonuclease III [Bacteroides fluxus YIT 12057] gi|328524636|gb|EGF51699.1| exodeoxyribonuclease III [Bacteroides fluxus YIT 12057] Length = 254 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 87/305 (28%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++++N+N L + L ++ D++ LQE + A Sbjct: 1 MKIITYNVNGLRA---------------AVTKGLPEWLAQEQPDVLCLQETKLQPEQYPA 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + + + +A+ + + G Sbjct: 46 DALDSLGYRHYLYSAQKKGY----------SGVAILTRREP----DHVEYGMGIEEYDNE 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + + V+ ++ S D + + + ++++ + + + Sbjct: 92 GRF-----IRADYGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEKFQEYVLELQRT 139 Query: 202 LVPFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD+N + +D W T N I + Sbjct: 140 RPKLILCGDYNICHEPIDIHDPIRNATNSGFLPEEREWMTRFLNAGFIDSFRLLHPDKQE 199 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY ++ + L + G SDHCP+ Sbjct: 200 YTWWSYRFNSRAKNKGWRIDYCMVSEPVRPMLKEAQIL-----------NGAVHSDHCPM 248 Query: 299 SIDYD 303 S++ Sbjct: 249 SLEIT 253 >gi|297739882|emb|CBI30064.3| unnamed protein product [Vitis vinifera] Length = 542 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 84/312 (26%), Gaps = 68/312 (21%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P A+ V+L+SWN+N L + D+ D++ LQE Sbjct: 273 PPLTGDAKFVKLMSWNVNGLRGLLKSKGFSALKLAQREDF------------DVLSLQET 320 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + ++ + ++ + ++ A+ + + + + Sbjct: 321 KLQEKDVEAIKQSVIEGYENSFWT-----CSVSKLGYSGTAIISRIKPLSVRYGLGISDH 375 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 DS R + + ++L ++ + S Q Sbjct: 376 DSEGRL---------LTAEFESFYLLSGYVPN-------SGDGLKRLSYRVTQWDSALGS 419 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPK 239 ++ E P ++ GD N + +D + + Sbjct: 420 YMKELEKSKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTDEERQSLEKNFLSKGFVDSFR 479 Query: 240 EKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 ++ + +DYF++ ++ + D Sbjct: 480 KQHPGVVGYTYWGYRNGCRKSNKGWRLDYFLVSESIADKVH-----------DSYILPDI 528 Query: 291 RLSDHCPISIDY 302 SDHCPI + Sbjct: 529 GGSDHCPIGLVL 540 >gi|225441351|ref|XP_002274714.1| PREDICTED: similar to apurinic endonuclease-redox protein [Vitis vinifera] Length = 490 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 84/312 (26%), Gaps = 68/312 (21%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P A+ V+L+SWN+N L + D+ D++ LQE Sbjct: 221 PPLTGDAKFVKLMSWNVNGLRGLLKSKGFSALKLAQREDF------------DVLSLQET 268 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + ++ + ++ + ++ A+ + + + + Sbjct: 269 KLQEKDVEAIKQSVIEGYENSFWT-----CSVSKLGYSGTAIISRIKPLSVRYGLGISDH 323 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 DS R + + ++L ++ + S Q Sbjct: 324 DSEGRL---------LTAEFESFYLLSGYVPN-------SGDGLKRLSYRVTQWDSALGS 367 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPK 239 ++ E P ++ GD N + +D + + Sbjct: 368 YMKELEKSKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTDEERQSLEKNFLSKGFVDSFR 427 Query: 240 EKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 ++ + +DYF++ ++ + D Sbjct: 428 KQHPGVVGYTYWGYRNGCRKSNKGWRLDYFLVSESIADKVH-----------DSYILPDI 476 Query: 291 RLSDHCPISIDY 302 SDHCPI + Sbjct: 477 GGSDHCPIGLVL 488 >gi|281424726|ref|ZP_06255639.1| AP endonuclease domain protein [Prevotella oris F0302] gi|281401096|gb|EFB31927.1| AP endonuclease domain protein [Prevotella oris F0302] Length = 363 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 87/303 (28%), Gaps = 70/303 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++++S+N+ + + E + K + +Y + ADI+ LQE + Sbjct: 99 DAIKVMSYNVWSFAGWERHADGKFP----------ILEYIREQQADILCLQEAMTNEIGQ 148 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 I+ + + + IA+ + V + + Sbjct: 149 ARVDSVLNKIYAYKDTMK-------FSPSSDCIALYSRYPIVSHERIVYPSRGNLSG--- 198 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------- 178 ++I + V++ HL++ + + + Sbjct: 199 -----AFEIKIGNDTVIVVNNHLETTGLSNEDKREFKSMVKGNLLTSDAKQASYRLIDKL 253 Query: 179 -PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + + + QA + +I++ S ++ GDFN + F Sbjct: 254 GEASAKRAVQADAVARYISKH--SDRSMIVCGDFNDSPISYARHTI------AKGLTDCF 305 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + N + ID+ + ++ + D SDH P Sbjct: 306 IATGNGLGVSYHNGGMYVRIDHIMCSKD---------WQPYGCKVDRSIGE----SDHYP 352 Query: 298 ISI 300 I Sbjct: 353 ILC 355 >gi|255034710|ref|YP_003085331.1| exodeoxyribonuclease III Xth [Dyadobacter fermentans DSM 18053] gi|254947466|gb|ACT92166.1| exodeoxyribonuclease III Xth [Dyadobacter fermentans DSM 18053] Length = 261 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 36/302 (11%), Positives = 83/302 (27%), Gaps = 70/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN ++ +L ++ + D+V LQE+ + Sbjct: 1 MKIATYNINGVNG----------------RLPVLLKWLEEAKPDVVCLQELKAPQD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + +A+ K++ + + L G S +R Sbjct: 41 ------KFPERALLDAGYNSIWHGQKMWNGVAILSKDLPIQEVRNSLPGD---DSDLHSR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ ++ V ++L + + Y + + LK V Sbjct: 92 YIEAIV-----GRMLVCCLYLPNGNPAPGPKFDYKMA------WFKRLKKHAKYLLSEEV 140 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGD+N +K + + Sbjct: 141 PVVLAGDYNVIPKEKDVYKPERWVDNALFFPEPRKAYKELVGQGWIDSIRHLHPDETIYT 200 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +D+ ++ L+ D ++ SDH P I Sbjct: 201 FWDYLRNAYGRNAGLRLDHLLLSPQIAPRLVAAGV-------DKHVRGWEKSSDHAPTWI 253 Query: 301 DY 302 Sbjct: 254 IL 255 >gi|254509579|ref|ZP_05121646.1| endonuclease/exonuclease/phosphatase family protein [Rhodobacteraceae bacterium KLH11] gi|221533290|gb|EEE36278.1| endonuclease/exonuclease/phosphatase family protein [Rhodobacteraceae bacterium KLH11] Length = 236 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 43/284 (15%), Positives = 82/284 (28%), Gaps = 55/284 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + + +RL S+NI + + Q ++L ADIV LQE Sbjct: 4 TQSSTLRLASYNIQKCVGLD-----------LRRQPQRILQVIESLQADIVVLQEADKR- 51 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + + + ++++ S A+ R + V Q + L Sbjct: 52 LPPRPAALPHFMLDEAGWQIVDLGGAGSLGWHGNAVIWRGDAIEVRQTGHHDLPG----- 106 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R AV + + + V+ +HL + +Q ++ Sbjct: 107 -LEPRGAVRVEFDTQIGPLRVMGMHLGLLS-------------ASRRRQITHIRH--CDS 150 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + +P V AGDFN + + P+ + + + +D Sbjct: 151 DLADMPTVWAGDFN-----EWSRQPVLDHLAPDMRFL-------PPVPSFPAAQPLGALD 198 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + Q L SDH P+ D Sbjct: 199 RIAVGQGLEAALHGV----------HNARPAHIASDHLPVWADL 232 >gi|222098525|ref|YP_002532583.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus Q1] gi|221242584|gb|ACM15294.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus Q1] Length = 327 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 109/324 (33%), Gaps = 64/324 (19%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T + + + +N ++D Sbjct: 25 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 84 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117 LQE+ + + F N + S + + ++ Sbjct: 85 LQEVDIKSM--RSFDVNGHEFLKNGLPDYASSFGKNYDTKWVPVPITSPMGYAEAGLSTF 142 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLE 174 K + + L G + R + R VE + + NGK + ++++HL + Sbjct: 143 SKYKVQTAERFQLPGMEPWPKRLFDLDRAIVEHKIPVSNGKFVRLVNLHLSA-------- 194 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 Y + QQ ++LK+++ + ++ ++ GD+N+ ++ + +D + P + Sbjct: 195 --YDEGGKIRKQQVEFLKEYMNKHYKNGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWLV 252 Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278 D + ID F++ N ++ ++ Sbjct: 253 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 310 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P+S + Sbjct: 311 KFEN----------SDHNPVSAVF 324 >gi|260788626|ref|XP_002589350.1| hypothetical protein BRAFLDRAFT_217983 [Branchiostoma floridae] gi|229274527|gb|EEN45361.1| hypothetical protein BRAFLDRAFT_217983 [Branchiostoma floridae] Length = 372 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 32/271 (11%), Positives = 73/271 (26%), Gaps = 29/271 (10%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDS 106 + + + + + D+V LQE+ S + K+ + ++ +++ Sbjct: 8 PARFQAIGEELCSGRYDLVSLQEVWSQDVYEKLVYQVQDVLPYHHYFYRHVKLSNVLHGW 67 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPL-----LGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 + + + V + + + G + V G +I + Sbjct: 68 HG---SGLCVFSRYPIIGSHQHRFTLNGFPHTPHHPDWYGGKMVGLCQVRHPGAEINIYV 124 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI------ 215 H + + QA L +I +S ++AGD N + Sbjct: 125 THTH-----TEYNHENDKDKAHRVLQAFELSQFIRHTGQSADVNILAGDLNNQPFELGLK 179 Query: 216 ---NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 + G +D + N D DY + +A + Sbjct: 180 IIESNTGMDDGWLTAEHKNAEDSGLTWNLDDNNYTCYPDYPPCRYDYVLYKGSARCRVRC 239 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ SDH + + Sbjct: 240 VHCETTMHKVPGKP---FNYSDHEGVVAHLE 267 >gi|85375221|ref|YP_459283.1| exonuclease III [Erythrobacter litoralis HTCC2594] gi|84788304|gb|ABC64486.1| exonuclease III [Erythrobacter litoralis HTCC2594] Length = 265 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 32/307 (10%), Positives = 75/307 (24%), Gaps = 69/307 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 V + +WNIN ++ ++ D++ LQE+ Sbjct: 2 VSVTTWNIN----------------SVRLRMPIVERFIDQEAPDVLCLQEIKCQE----- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +L + +A K + D R Sbjct: 41 ----HQFPYEAFRKLGYEHFAVHGQKGYHGVATVGKVPFTEFSRH------DWQDNGEAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 L E K + ++++ + + Q+ +L+ + Sbjct: 91 HVGIELTEGPAKGTVIENVYVPAGGDIPD-----REQNLKFGQKLDFLERMTRWADKVDR 145 Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247 P +I GDFN + + +D + + + Sbjct: 146 PTLIVGDFNIAPLESDVWNHKQLLKVVSHTPVEVETLQRFMDAHGWSDIGREHIRAPERY 205 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + ++ SDH P Sbjct: 206 YSWWSYRSPDWRKNDRGRRLDHMWASPELAAQATGHRL-------LEDARSWEKPSDHIP 258 Query: 298 ISIDYDF 304 ++ ++ F Sbjct: 259 LTTEFTF 265 >gi|282859591|ref|ZP_06268695.1| endonuclease/exonuclease/phosphatase family protein [Prevotella bivia JCVIHMP010] gi|282587642|gb|EFB92843.1| endonuclease/exonuclease/phosphatase family protein [Prevotella bivia JCVIHMP010] Length = 326 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 35/327 (10%), Positives = 85/327 (25%), Gaps = 50/327 (15%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAK 62 P + +V N + + +L + S + + + Sbjct: 13 FPLGGIAQTRFTIVELNTENMFDVRHDTLKHDEEFLPDGLRHWSKAKYWEKLNNIGKTIL 72 Query: 63 NLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 + D+V L E+ + + + ++ + + S ++ + Sbjct: 73 SCGKDSTRWSVPDVVGLCEVENDTVLFDLTKRS-----LLRKARYEYVMTQSADERGIDV 127 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSL 173 A+ + R + ++ EI + V +H S + Sbjct: 128 ALLYSPFSFRLLKADTIRIIPMKGMKPTRDILHVMGEIPSSDTLHVFLVHAPSRSGGELQ 187 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWKTIDPN 231 Y A+ L I K V +I GDFN + + + Sbjct: 188 TRPY------RLHIAKQLACSIDSIKAIDVHAKMLIMGDFNDYSDSPSLQKLYVHNMLDV 241 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY----------- 280 + + + + +D+ ++ N + ++ + Sbjct: 242 SANAQGTHGAKA---TYRYQGEWGSLDHILVSGNLLSNVKDCYINDAPFLLEPDTKYGGV 298 Query: 281 ---NEDDIKSRGKRLSDHCPISIDYDF 304 + SDH P+ + F Sbjct: 299 KPRRNYNGMRYNHGFSDHLPLVLKLVF 325 >gi|256962167|ref|ZP_05566338.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis Merz96] gi|293383194|ref|ZP_06629110.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis R712] gi|293387652|ref|ZP_06632198.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis S613] gi|312907219|ref|ZP_07766210.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis DAPTO 512] gi|312909837|ref|ZP_07768685.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis DAPTO 516] gi|256952663|gb|EEU69295.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis Merz96] gi|291079372|gb|EFE16736.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis R712] gi|291082984|gb|EFE19947.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis S613] gi|310626247|gb|EFQ09530.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis DAPTO 512] gi|311289795|gb|EFQ68351.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis DAPTO 516] Length = 254 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 84/287 (29%), Gaps = 48/287 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+ V + + + + Q D + +QE+ Sbjct: 1 MKVATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138 Y+T ++ + AI ++ ++ + Y L Sbjct: 54 A--------YTTFTCLSAEREGDGQGEGLAILYNEQKIQAIDTGYFWLSETPQQPSIHPE 105 Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A+ L + V+++HL + + ++ + L D I Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNANKNLRNK 254 Q P ++ GDFN + + + K N + P+ K Sbjct: 158 QY-----PTLLMGDFNAE-SEEEVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAEL 211 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + + + G+ SDH P+ + Sbjct: 212 EEIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248 >gi|167748893|ref|ZP_02421020.1| hypothetical protein ANACAC_03667 [Anaerostipes caccae DSM 14662] gi|317470265|ref|ZP_07929659.1| exodeoxyribonuclease III [Anaerostipes sp. 3_2_56FAA] gi|167651863|gb|EDR95992.1| hypothetical protein ANACAC_03667 [Anaerostipes caccae DSM 14662] gi|316902238|gb|EFV24158.1| exodeoxyribonuclease III [Anaerostipes sp. 3_2_56FAA] Length = 251 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 79/302 (26%), Gaps = 78/302 (25%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 LVSWN+N L + LDADI +QE + Sbjct: 4 LVSWNVNGLRACVKKGF---------------LDVMEQLDADIFCIQETKLQEGQIDLEL 48 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + + + ++ AV K + ++ + D R Sbjct: 49 PDYYQYW-----------NYAEKKGYSGTAVFTKIKPLSVKNGIGVDEFDHEGR------ 91 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++ + +++ + + + + + L++ P Sbjct: 92 ---VITLEFDDYFLVTCYTPNSQSELARLSYRMDWEENFREYLLKLEE--------DKPV 140 Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 ++ GD N + + + + F A Sbjct: 141 ILCGDLNVAHTEIDLKNPKTNRKNAGFTDEEREKFTKLLEAGFIDTFRHFYPDVTEAYSW 200 Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + IDYF + + + L + +Y SDHCP+ + Sbjct: 201 WSYRFRAREKNAGWRIDYFCVSEGLEERLAEAVIHTDIY-----------GSDHCPVGLY 249 Query: 302 YD 303 + Sbjct: 250 LE 251 >gi|73976313|ref|XP_539516.2| PREDICTED: hypothetical protein XP_539516 isoform 2 [Canis familiaris] Length = 564 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 34/295 (11%), Positives = 77/295 (26%), Gaps = 38/295 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+ S V N R TLL K ++ +QE+ A+ K Sbjct: 261 LRLATWNVQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 311 Query: 84 FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKKNVRVLQQSYPLL 131 + I + + + + + Sbjct: 312 CTELNQPILPNIRKWKGPRGCWKAVVAEMPSTQLQKPPPLAGFPYLWPHGSSVVTAAESS 371 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + + ++++HL + + + S S Sbjct: 372 PGSGHSPCCRP----SARFPVGSNDLTLVNLHLATLVHPGGENPSRNHSDSHR---LASF 424 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 + + + ++ GDF + + + + P + + KN Sbjct: 425 VQTLQETLKGEKDMIVLGDFGQGPDSSDYD-----ILRKEKFYHLVPAHTFTNI-STKNP 478 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302 + +D + ++ K I S+HCP+ ++ Sbjct: 479 QGSKSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEF 533 >gi|50119211|ref|YP_048378.1| endonuclease/exonuclease/phosphatase family protein [Pectobacterium atrosepticum SCRI1043] gi|49609737|emb|CAG73171.1| endonuclease/Exonuclease/phosphatase family protein [Pectobacterium atrosepticum SCRI1043] Length = 392 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 34/275 (12%), Positives = 86/275 (31%), Gaps = 27/275 (9%) Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 ++ + L+ADI+ E+ + + + + +S +I+ Sbjct: 122 SSQQRKNTGKIINLLNADILCAVEVENMDVLRDFNSQVLGKKKFSQFVMIDSPN--DPRG 179 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 I A R + V++ + A F +R +E+ ++ K+ + + Sbjct: 180 IDVACLTRYRIVQL---RTHIFDAGKQFDPVFSRDCLEVTLDAGLKQ-PIYILCNHFKSQ 235 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLGNNDDFWKTI 228 E Q++ + + + Q + VI GD N + + ++ Sbjct: 236 SGQTEQERQRGAQKRRDQSERVAEIVQQTYDLKKDYVVILGDLNEDSSNPWQSLAPLFSL 295 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIP----IDYFVMDQNAYKFLIQESFSEI------ 278 +I + + R + K +DY + ++ +++ Sbjct: 296 SDLHPVIDPERPEKERYTYYFSGGKKGARLNQLDYIFLSAPLHQAVVEWGVERRGIYNID 355 Query: 279 ----------LYNEDDIKSRGKRLSDHCPISIDYD 303 + ++ S SDH + ++ D Sbjct: 356 KIAAKEGAEPVTPLPEVTSWDTAASDHAALWVEVD 390 >gi|117919422|ref|YP_868614.1| endonuclease/exonuclease/phosphatase [Shewanella sp. ANA-3] gi|117611754|gb|ABK47208.1| Endonuclease/exonuclease/phosphatase [Shewanella sp. ANA-3] Length = 377 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 39/367 (10%), Positives = 85/367 (23%), Gaps = 78/367 (21%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIV 69 L T S +++ + N+ E S + + DIV Sbjct: 8 LSSLTESTQSNIKIATVNLFNFIEPPSAFYDFENIYSHGQWQKKCQWFSELLNQHHPDIV 67 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV---LQQ 126 QE+ S + ++ ++ A+A R + V + Sbjct: 68 GFQEVFSPEPLRQLA-LQQGLTHFAVVDSATLVSDYIYQSPVVALASRFPILEVHAIEPE 126 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFL--------------- 170 + + S + +R+ + V + +H KS Sbjct: 127 ANLVAAMGLSSEFSFSRKVLRATVAVPQIGPCDCYVVHFKSKRAGLALEPHPLGLSLNAP 186 Query: 171 ------------DSLENTYSPSCSLLSQQAQWL-KDWITQKKESLVPFVIAGDFNRK--- 214 S +A L + +++ + P ++ GDFN Sbjct: 187 SDLKLHAETKLLTEQALGRWASTMQRGAEAALLFHAILARRQSAKYPVILMGDFNDSLSL 246 Query: 215 ------------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN---------------- 246 ++ + F + Sbjct: 247 GALDALTLQGEALHSNDIKAAGLGHLSDAALAQVFGHYRLQDAYELFIEANVVDNAVHYR 306 Query: 247 -----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKRLSDH 295 + +DY ++ + + Y D R +DH Sbjct: 307 EHRAPTHYYGPKGSVLDYVLLSNEFDASDSRSLAQVVDYQTCDRHLVRPEYERDAYSTDH 366 Query: 296 CPISIDY 302 P+ ++ Sbjct: 367 APVMVEL 373 >gi|326390442|ref|ZP_08212000.1| exodeoxyribonuclease III Xth [Thermoanaerobacter ethanolicus JW 200] gi|325993560|gb|EGD51994.1| exodeoxyribonuclease III Xth [Thermoanaerobacter ethanolicus JW 200] Length = 257 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 86/307 (28%), Gaps = 81/307 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80 ++ VSWN+N L Y K ++ADI +QE + Sbjct: 1 MKFVSWNVNGLRACLQKGFM---------------DYFKKVNADIFCIQETKLQPHQTGL 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++ + + + + ++ AV K + + D+ R Sbjct: 46 EELNLEGYYAFW-----------NFAEKKAYSGTAVFTKYKPLSVNYGIGIPQHDNEGR- 93 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 ++ + +K ++++ + + + + L + Sbjct: 94 --------VITLEYEKFYLVNTYTPNSQRGLTRLSYRMEWEEDFRNYLLKL--------D 137 Query: 201 SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 S+ P ++ GD N + + + + F + Sbjct: 138 SVKPIILCGDLNVAHKEIDIKNPSANRRNAGFTDEEREKMTMLLNSGFIDTFRYFYPHKK 197 Query: 246 NANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 +A IDYF++ Q +LI SDHC Sbjct: 198 DAYTWWSYMRNAREKNIGWRIDYFIVSQRLKDYLIDAEIH-----------SDVMGSDHC 246 Query: 297 PISIDYD 303 P+ ++ D Sbjct: 247 PVVLEID 253 >gi|126433840|ref|YP_001069531.1| exodeoxyribonuclease III Xth [Mycobacterium sp. JLS] gi|126233640|gb|ABN97040.1| exodeoxyribonuclease III Xth [Mycobacterium sp. JLS] Length = 263 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 31/281 (11%), Positives = 74/281 (26%), Gaps = 57/281 (20%) Query: 47 VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 +R+T + LL + K AD+V LQE + + + H Sbjct: 16 KQRSTENLGLLA-WLKETSADVVCLQETRADDDQLADALAPALADGWHLASASPH----- 69 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 +AV ++ + D +E++ + V +++++ Sbjct: 70 -LKGRNGVAVLSRHAVTEHRRMESEEFGDHGRY----------LEVDTGGLTVASVYVQT 118 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--- 223 + + L+ + ++ V+ GD+N + Sbjct: 119 GEAETDRQLEKERFMAALATRMAEIR---------GTDAVVCGDWNIAHTENDIKNWKGN 169 Query: 224 ------------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVM 262 + + + + IDY + Sbjct: 170 VKKSGFLPSERQWLTDLLGTGWVDVVRALHPDVAGPYSWWSWRGRAFDNDAGWRIDYQLA 229 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + + R SDH P++++Y Sbjct: 230 SPSLAPRA-------HIARVERADAYALRWSDHAPVTVEYS 263 >gi|260903873|ref|ZP_05912195.1| hypothetical protein BlinB_00970 [Brevibacterium linens BL2] Length = 255 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 32/283 (11%), Positives = 79/283 (27%), Gaps = 37/283 (13%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++N+ + + + + I+ QE Sbjct: 3 DFSIMTFNLRYPALDGHP---------VATRLPIAAELITQARPHIIGTQEGELDQLENL 53 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + ++ +S + ++ + P A +S+ + Sbjct: 54 ISLLPKEYVWLGEGHSGGNSGEFTAVIYDSSRFDVDRVDISWLSEQPETVASESWGVSHA 113 Query: 143 RRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + + + + +L+ HL S + + + D + + Sbjct: 114 RTLTVVDFRDLVTKQPLRLLNTHLDH------------RSEEARLESGKIMADHLAEAAG 161 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDY 259 P V+ GDFN + F + D+ P E + K ++ ID+ Sbjct: 162 ---PCVVTGDFNVATGS-PVYNYFCTELGLTDTGAAVPGENIGTFHRYKGPKDGDPRIDW 217 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + + + G+ SDH P+ Sbjct: 218 ILTTSDL---------QTVSTRINTFSAGGEYPSDHFPVEAVL 251 >gi|313897464|ref|ZP_07831007.1| exodeoxyribonuclease III [Clostridium sp. HGF2] gi|312957834|gb|EFR39459.1| exodeoxyribonuclease III [Clostridium sp. HGF2] Length = 254 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 82/304 (26%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RLVSWN+N + + K +DAD+ +QE ++ Sbjct: 1 MRLVSWNVNGIRACMQKGFM---------------DFFKEIDADVFCIQETKMQPGQLEI 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S E ++ V K + + D R Sbjct: 46 ETPGYYQYMNSAE-----------KKGYSGTMVFSKQKPLSVTYGLGIEEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + + ++ K Sbjct: 91 -----VITCEYEDFYLVCVYTPN-------SKDGLLRLDYRMVWEDAFRAYL-HKLNETK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N + + + F + Sbjct: 138 SVLVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKMSVLLESGFIDSFRYLYPKQEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ ++A + + + +Y SDHCP+S Sbjct: 198 SWWSYRFKAREKNAGWRIDYFLVSEDAKEAIREARIHTDIY-----------GSDHCPVS 246 Query: 300 IDYD 303 +++D Sbjct: 247 LEFD 250 >gi|301095832|ref|XP_002897015.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262108444|gb|EEY66496.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 490 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 90/299 (30%), Gaps = 41/299 (13%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + SWNI +S ++ + L + K DIV LQE+ + ++ Sbjct: 193 VASWNIRNISRRKEIFL-----------LERIADILKEF--DIVALQEVRDLIVLKRLKT 239 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + +E + S A R+ R++++ + + G+ D F+R Sbjct: 240 MLPGWDYVVSEPVGRMSPGAKKRVERYAFFYRRSAARLVEKCWLVEGSSDVFTRLPCVAT 299 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 E + + I++ + S + L + ++ Sbjct: 300 FRATKESGVTGLELALINVH-------VSFAEKESRHAEIAEISRLANELSASVPINRKV 352 Query: 206 VIAGDFNRKI----------NYLGNNDDFWKTIDPNDSLI-RFPKEKDSRCN----ANKN 250 V+ GDFN T+ + S CN Sbjct: 353 VVLGDFNLSPQDVLGSLGSHKMALIRSPLSTTVFGKLYDNIWLDRADFSNCNIDKPTYCV 412 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR------GKRLSDHCPISIDYD 303 + +D+ + + + + +++ G LSDHCP+ + + Sbjct: 413 DSGVLRVDWRFYPPSKGTCSRRSAQHPMDTMLPRLQTYMSRVQCGYELSDHCPVWVAFT 471 >gi|237733965|ref|ZP_04564446.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|229383046|gb|EEO33137.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 251 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 79/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N + + K ADI +QE ++ Sbjct: 1 MKLVSWNVNGIRACITKGFY---------------DVLKESKADIFCVQETKMQEGQIEL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S E ++ V K + + D R Sbjct: 46 EKHGYYTYMNSAE-----------KKGYSGTLVFSKEKPLNYSYGIGIEEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + +K ++++ + + + ++ ++S Sbjct: 91 -----VVTLEYEKFYLVNCYTPN-------SQNELKRLDYRMHWEEDFLAYLKSLEKSK- 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + N + + + Sbjct: 138 PVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAKMTNLLENGFIDTYRYLYPDQEGVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ + + + + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFIVSDCLKEGIKEAFICTDIL-----------GSDHCPVG 246 Query: 300 IDYD 303 ++ D Sbjct: 247 LEID 250 >gi|28493411|ref|NP_787572.1| exodeoxyribonuclease III [Tropheryma whipplei str. Twist] gi|28476452|gb|AAO44541.1| exodeoxyribonuclease III [Tropheryma whipplei str. Twist] Length = 285 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 72/305 (23%), Gaps = 61/305 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 VR+ +WN+N + + + KN D+ LQE Sbjct: 7 VRVGTWNVN----------------SIRARLERVLAWLKNECIDVAALQETKVRTG---- 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + +A+ + R G Sbjct: 47 ------DFPVDAFRDAGYYSEAHGLRGFEGVAIVSRFPIRRVTVNIPRAPGFLSDRWGTD 100 Query: 144 RAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE-- 200 E + I + +++ + + S Y + + L + Sbjct: 101 IPQEARAISATTGGIRLYSLYVPNGREVGSPHFEYKLA------WLKALASHVRTVLRRT 154 Query: 201 SLVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 +P ++ GDFN I G + ++ I Sbjct: 155 PGIPLMLVGDFNIVTCEQDTADPDFQLPNDITCSGPEREAFQAILDTGMFDLIRPFAPIG 214 Query: 245 CNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + R + ID+ + + + I G SDH P+ Sbjct: 215 FTSWSYQRQRFQNNQGLRIDFMLGSDSVQRRTIWGEID----RVQRRHLFGLTPSDHAPL 270 Query: 299 SIDYD 303 D Sbjct: 271 VSVID 275 >gi|967268|gb|AAC47024.1| class II apurinic/apyrimidinic(AP)-endonuclease [Dictyostelium discoideum] Length = 361 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 33/309 (10%), Positives = 81/309 (26%), Gaps = 77/309 (24%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAV 80 +++++SWN+ + + + D++ LQE + + + Sbjct: 103 NQMKIISWNVAGFKSVLSKGF---------------TECVEKENPDVLCLQETKINPSNI 147 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K + + H T + +KK + G + Sbjct: 148 KKDQMPKGYEYHFIEADQKGHHG--------TGVLTKKKPNAIT------FGIGIAKHDN 193 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R ++ + + ++++ ++ + Y + QA +K Sbjct: 194 EGR-----VITLEYVQFYIVNTYIPNAGTRGLQRLDYRIKEWDVDFQA------YLEKLN 242 Query: 201 SLVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245 + P + GD N + + + + + Sbjct: 243 ATKPIIWCGDLNVAHTEIDLKNPKTNKKSAGFTIEERTSFSNFLEKGYVDSYRHFNPGKE 302 Query: 246 NANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +DYFV+ + + F SDHC Sbjct: 303 GSYTFWSYLGGGRSKNVGWRLDYFVVSKRLMDSIKISPFH----------RTSVMGSDHC 352 Query: 297 P--ISIDYD 303 P + +D + Sbjct: 353 PIGVVVDLN 361 >gi|332662210|ref|YP_004444998.1| endonuclease/exonuclease/phosphatase [Haliscomenobacter hydrossis DSM 1100] gi|332331024|gb|AEE48125.1| Endonuclease/exonuclease/phosphatase [Haliscomenobacter hydrossis DSM 1100] Length = 286 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 38/296 (12%), Positives = 70/296 (23%), Gaps = 44/296 (14%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 AQ + +++NI + Q+G + + L DI +QE Sbjct: 23 AQSLVTMTFNIRYNTTQDGEN-------QWQKRKENLASMLPFYGVDICGMQEALVGQIK 75 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG-----AKD 135 + + + S I K VL + L Sbjct: 76 DVISAQPQYAYLGVGRDDGQEKGEFSP------ILYLKDKFEVLSSATFWLSETPNVPSK 129 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + NR + K + + S LL Q+ + + Sbjct: 130 GWDANLNRIVTWAKFKDKKSKKVFYFFNTHY---DHIGKVARRESSKLLLQKVKEIA--- 183 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-- 253 P +I GDFN + + +P+ + Sbjct: 184 -----GTTPAIITGDFNAVPSDEPI-TVLVEANNPDKLIDTEGLSLSPHFGPYSTFNGFT 237 Query: 254 -----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY + + + G+ SDH + + Sbjct: 238 VMEQEGRHIDYIFIKN-------PGKLKVLKHATLTNTWAGRFASDHHAVLAVLGW 286 >gi|327313318|ref|YP_004328755.1| exodeoxyribonuclease III [Prevotella denticola F0289] gi|326944960|gb|AEA20845.1| exodeoxyribonuclease III [Prevotella denticola F0289] Length = 249 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 83/302 (27%), Gaps = 77/302 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L G Q K+LDAD LQE A Sbjct: 1 MKFISWNVNGLRACVGKEFE---------------QQFKDLDADFFCLQETK-MQAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ ++ ++ A+ K+ + + D R Sbjct: 45 LSFPGYESYWN----------YADKKGYSGTAIFTKHKPLNVTYGIGIDEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + + + ++ K + Sbjct: 91 -----VITLEMDDFYLVTVYTPN-------SQDGLRRLDYRMKWEDDFQAYL-HKLDEKK 137 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P V+ GD N + + + + + Sbjct: 138 PVVVCGDMNVAHQEIDLKNPKTNRKNAGFTDEEREKMTQLLGNGFIDTFRTLYPEQVTYS 197 Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + R + IDYF++ + L + SDHCP+ + Sbjct: 198 WWSYRFRARERNTGWRIDYFLISERLRDRLEDAKIHTEI-----------MGSDHCPVEV 246 Query: 301 DY 302 D Sbjct: 247 DL 248 >gi|237730766|ref|ZP_04561247.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226906305|gb|EEH92223.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 253 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 45/284 (15%), Positives = 81/284 (28%), Gaps = 50/284 (17%) Query: 28 SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV---- 83 S+N+ T++ +G + + LR+ + + ADIV LQE+ + + Sbjct: 9 SFNVLTINTHKGFTAFNRRF-----ILPELREAVRTVGADIVCLQEVMGAHEAHSLHIEN 63 Query: 84 FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +P + F + + + + H AV + S + Sbjct: 64 WPDTSHYEFLADTMWSDFAYGRNAVYPQGHHGNAVLSRYPIE-----HYENRDVSVGASE 118 Query: 142 NRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + + I V+ +HL + Q L DW+ Sbjct: 119 KRGVLYCRIVPPMLSHPIHVMCVHLGLR-------------EAHRQAQLAMLADWVNA-L 164 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI-RFPKEKDSRCNANKNLRNKIPID 258 P VIAGDFN + + L F + + +D Sbjct: 165 PDAEPVVIAGDFNDW------RQTANRPLKAKAGLDEIFTRAHGRPARTFPVQFPLLRLD 218 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + LSDH P+S + Sbjct: 219 RIYVKNANAS-----------TPTTLALRHWRHLSDHAPLSAEI 251 >gi|108798182|ref|YP_638379.1| exodeoxyribonuclease III (xth) [Mycobacterium sp. MCS] gi|119867278|ref|YP_937230.1| exodeoxyribonuclease III Xth [Mycobacterium sp. KMS] gi|108768601|gb|ABG07323.1| exodeoxyribonuclease III (xth) [Mycobacterium sp. MCS] gi|119693367|gb|ABL90440.1| exodeoxyribonuclease III Xth [Mycobacterium sp. KMS] Length = 263 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 30/281 (10%), Positives = 74/281 (26%), Gaps = 57/281 (20%) Query: 47 VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 +R+T + LL + K AD+V LQE + + + H Sbjct: 16 KQRSTENLGLLA-WLKETSADVVCLQETRADDDQLADALAPALADGWHLASASPH----- 69 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 +AV ++ + + +E++ + V +++++ Sbjct: 70 -LKGRNGVAVLSRHAVTEHRRMESEEFGEHGRY----------LEVDTGGLTVASVYVQT 118 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--- 223 + + L+ + ++ V+ GD+N + Sbjct: 119 GEAETDRQLEKERFMAALAMRMAEIR---------GTDAVVCGDWNIAHTENDIKNWKGN 169 Query: 224 ------------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVM 262 + + + + IDY + Sbjct: 170 VKKSGFLPSERQWLTDLLGTGWVDVVRALHPDVAGPYSWWSWRGRAFDNDAGWRIDYQLA 229 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + + R SDH P++++Y Sbjct: 230 SPSLAPRA-------HIARVERADAYALRWSDHAPVTVEYS 263 >gi|82701739|ref|YP_411305.1| endonuclease/exonuclease/phosphatase [Nitrosospira multiformis ATCC 25196] gi|82409804|gb|ABB73913.1| Endonuclease/exonuclease/phosphatase [Nitrosospira multiformis ATCC 25196] Length = 250 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 86/281 (30%), Gaps = 48/281 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----GSY 77 K+ + ++NI+ LR + L+ADI+FLQE+ + Sbjct: 3 NKLHIATYNIHKGFSHFN----------RRVMVHQLRDSLRALNADIIFLQEVVGEHKGH 52 Query: 78 NAVAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 A + +P++ F + + K ++ H A+ + + + + Sbjct: 53 GARFENWPESPQYEFLADSIWTDFAYGKNAVYDEGHHGNAILSRYPILRWDNVDVSA--- 109 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R +R + + I + + I + F S+Q Q L+ I Sbjct: 110 --HRFESRGLLHCEIGIPQWRENLHCICVHLGLFK-----------RGRSRQLQLLEKHI 156 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + P VIAGDFN + + + + + +R + Sbjct: 157 EELVPQDAPLVIAGDFNDWREVAS--RILVQRLALAEVFEL-TEGRPARTYPSTLPLF-- 211 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 +D + + ++SDH Sbjct: 212 RLDRIYVRGFHIEKAQVHQGH-----------PWSKISDHA 241 >gi|297589938|ref|ZP_06948578.1| Sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus MN8] gi|297577066|gb|EFH95780.1| Sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus MN8] Length = 280 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 75/256 (29%), Gaps = 26/256 (10%) Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE--------RLINHSKRDSNNDIHTAIAV 116 + D+V E A K+ Y T S +A+ Sbjct: 28 NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAI 87 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 K + + F N+ V +E NGK + V+ H +S DS Sbjct: 88 VSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNGKNVHVIGTHTQS---EDSRCGA 143 Query: 177 YSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 + ++Q + + D++ + I GD N D K ++ ND L Sbjct: 144 GH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNVN-KGTEEFKDMLKNLNVNDVLY 201 Query: 236 RFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK--FLIQESFSEILYNEDDIKSR 288 N +DY D++ + L+ E +E D Sbjct: 202 AGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAFP 261 Query: 289 GKRL----SDHCPISI 300 + SDH PI Sbjct: 262 YYYVYNDFSDHYPIKA 277 >gi|47567314|ref|ZP_00238027.1| endonuclease/exonuclease/phosphatase family protein, putative [Bacillus cereus G9241] gi|47555935|gb|EAL14273.1| endonuclease/exonuclease/phosphatase family protein, putative [Bacillus cereus G9241] Length = 327 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 45/322 (13%), Positives = 105/322 (32%), Gaps = 64/322 (19%) Query: 21 AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++ ++NI G +S ++T + + + +N +D LQ Sbjct: 27 GNEFKVTTFNIGYGGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNEKSDFALLQ 86 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVRKK 119 E+ + + F N S + + ++ K Sbjct: 87 EVDIKSM--RSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTFSK 144 Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176 + + L G + R + R VE + +N GK + ++++HL + Sbjct: 145 YTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---------- 194 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 Y + QQ ++LK+++ + ++ ++ GD+N+ ++ +D + P + Sbjct: 195 YDEGGKIRKQQVEFLKEYMNKHYKNGDYVIMGGDWNQLVSNAQLSDPKFVKERPEWLVEL 254 Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280 D + ID F++ N ++ ++ + Sbjct: 255 PKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 312 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 SDH P+S + Sbjct: 313 EN----------SDHNPVSAVF 324 >gi|317492832|ref|ZP_07951256.1| endonuclease/Exonuclease/phosphatase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918954|gb|EFV40289.1| endonuclease/Exonuclease/phosphatase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 295 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 43/326 (13%), Positives = 95/326 (29%), Gaps = 66/326 (20%) Query: 1 MIRKYVLALVFFLVPC--------------------TASVAQKVRLVSWNINTLSEQEGV 40 +++K +L L+ F+V + S A ++ + ++N+ Sbjct: 3 LMKKIILGLIPFVVFAAHADTKVLTPEKNGTPNKIYSESQAPQLTIANYNM--------- 53 Query: 41 SLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN 100 SD + L + K ++ADI+ L E+ + + + Sbjct: 54 ------AAARVSDLSTLAKAIKAMNADIISLNEVDKNTQRSGKVDQVAELAKLTGM-HAA 106 Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 K +A+ K QQ +PL R + +++ ++ Sbjct: 107 FGKAIDFEGGEYGVALLSKYPIDKQQVFPLPSG-----DGEQRVLLVTQIQVPHFDSPII 161 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV------IAGDFNRK 214 + + ++ QQ + +++ +S + +AGDFN Sbjct: 162 MMSTHL---------DWQEDPTIRLQQIREIENVTIGNTDSSFNNIASSIKLLAGDFNDT 212 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 N + + D R N +D+ + + E Sbjct: 213 YNGPAIREL------ERYWNPLVVEGADMRTWPAANPALD--LDHLFAFRGQQWKI--EE 262 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISI 300 + + SDH P+ + Sbjct: 263 LTVPNKKAEWKAVNWPVASDHIPVIV 288 >gi|38073480|gb|AAR10849.1| MP100 [Trypanosoma cruzi] Length = 925 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 37/297 (12%), Positives = 82/297 (27%), Gaps = 39/297 (13%) Query: 23 KVRLVSWNINTLSEQEGVSL--WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++L++WN+ + + Y +L + + DAD+V +QE+ Sbjct: 647 TLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPKRYPVLARVIQQEDADVVGMQEVE----- 701 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + F S + + + S +I+ + V ++ +P+ A Sbjct: 702 ------PVFWEFLSKQPWMRENYYFSCGYTSPSISPWGVLMLVHRRRFPVQSITYLNVPA 755 Query: 141 GNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 + +++ + V HL + S +L + L Sbjct: 756 WTNHVSLMPVVCLQLPHGPVHVAAAHLLAPYTKSHETARTSQDSALRHHMLKTL------ 809 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR----- 252 V GDFN + + LI ++ + Sbjct: 810 ----TGDVVTMGDFNDWPTNEFLMPAESQYV-DCWPLIYHTMLENDGRDEYILQTECKLK 864 Query: 253 ----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---LSDHCPISIDY 302 D + + N+++ SDH +S+ + Sbjct: 865 VEEMFFGRSDKLFLRSRRLAPVEGHLVGTKSVNDENGNKEAPGYLFPSDHYGVSMTF 921 >gi|229546085|ref|ZP_04434810.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX1322] gi|256852883|ref|ZP_05558253.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|257085499|ref|ZP_05579860.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis Fly1] gi|307288462|ref|ZP_07568448.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0109] gi|307291220|ref|ZP_07571105.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0411] gi|229308781|gb|EEN74768.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX1322] gi|256711342|gb|EEU26380.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|256993529|gb|EEU80831.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis Fly1] gi|306497874|gb|EFM67406.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0411] gi|306500537|gb|EFM69868.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0109] gi|315029118|gb|EFT41050.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX4000] gi|315165454|gb|EFU09471.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX1302] Length = 254 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 84/286 (29%), Gaps = 46/286 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+ V + + + + Q D + +QE+ Sbjct: 1 MKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138 Y+T ++ + AI ++ V+ + Y L Sbjct: 54 A--------YTTFTCLSAEREGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHPE 105 Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A+ L + V+++HL + + ++ + L D I Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-PKEKDSRCNANKNLRNKI 255 Q P ++ GDFN + + K D + + P+ K Sbjct: 158 QY-----PTLLMGDFNAESGEAVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAELE 212 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + + + G+ SDH P+ + Sbjct: 213 EIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248 >gi|182678385|ref|YP_001832531.1| exodeoxyribonuclease III [Beijerinckia indica subsp. indica ATCC 9039] gi|182634268|gb|ACB95042.1| exodeoxyribonuclease III [Beijerinckia indica subsp. indica ATCC 9039] Length = 258 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 79/301 (26%), Gaps = 70/301 (23%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + +WNIN L +Y + DIV LQE+ + Sbjct: 3 IATWNIN----------------SIRQRTEHLLRYLDEVAPDIVCLQELKCTDDA----- 41 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 ++ + +A+ K ++ P + Sbjct: 42 -----FPFAAIEAKGYHAAVHGQKGFNGVAILSKQPIEVKCGLPGDSTDEHARYVEG--- 93 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 +++ ++ ++ ++L + D+ + TY + L + + Sbjct: 94 ---VIDSEIGRLRIVSLYLPNGNPPDTDKYTYKLA------WMDRLIAHASTLLQCEELL 144 Query: 206 VIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 V+AGD+N +L ++++ D Sbjct: 145 VLAGDYNVIPMPGDCYDPAVWATDALFLPPTRARFRSLLNLGFTNALRAVSDEP-GLYTF 203 Query: 251 LRN----KIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 ID+ ++ A L D + + SDH P+ + Sbjct: 204 WDYQAGAWQRNKGICIDHLLLSPQAVDHLQ-------HVVIDKERRGEDKPSDHVPVRVT 256 Query: 302 Y 302 Sbjct: 257 L 257 >gi|223634725|sp|Q5XJA0|TYDP2_DANRE RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase; AltName: Full=TRAF and TNF receptor-associated protein homolog gi|133777713|gb|AAI15077.1| Ttrap protein [Danio rerio] Length = 369 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 43/294 (14%), Positives = 90/294 (30%), Gaps = 48/294 (16%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + K+ ++SWN++ L + L Y D+VFLQE+ Sbjct: 116 SEVEDSKLSIISWNVDGLDTLNLADRARG-----------LCSYLALYTPDVVFLQEL-- 162 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + + S++ T I +RK V+ L+ Sbjct: 163 ---------IPAYVQYLKKRAVSYLFFEGSDDGYFTGIMLRKSRVKFLESEIICFPTT-- 211 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R + V +G+K++++ HL+S ++Q + + I Sbjct: 212 ---QMMRNLLIAQVTFSGQKLYLMTSHLESC----------KNQSQERTKQLRVVLQKIK 258 Query: 197 QKKESLVPFVIAGDFNRKINY-------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + + AGD N + D W+ + + R+ + + N Sbjct: 259 E-APEDAIVIFAGDTNLRDAEVANVGGLPAGVCDVWEQLGKQE-HCRYTWDTKANSNKTV 316 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ D + + + + G+ SDH I ++ Sbjct: 317 PYVSRCRFDRIFLRSAKTAP--PVTPDHMALIGMEKLDCGRYTSDHWGIYCTFN 368 >gi|150376441|ref|YP_001313037.1| exodeoxyribonuclease III Xth [Sinorhizobium medicae WSM419] gi|150030988|gb|ABR63104.1| exodeoxyribonuclease III Xth [Sinorhizobium medicae WSM419] Length = 257 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 78/302 (25%), Gaps = 70/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN ++ L + D+V LQE+ + + Sbjct: 1 MKIATFNINGVN----------------KRLDHLLIWLAAAGPDVVCLQELKATDG---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ + + L G S +R Sbjct: 41 ------QFPEAAIEAAGYGAVWLGQTAWNGVAILARGCEPVLTRTGLPGDP---SDTQSR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + I + ++ + + Y + L E+ V Sbjct: 92 YIEAAV-----NGILIASLYAPNGNPQPGPKFDYKLAWHQR------LNLHAAALLEARV 140 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSR--CN 246 P ++AGD+N +K++ L K Sbjct: 141 PVLLAGDYNVVPEPRDIYPTRSYDGNALVQPESRAAFKSLVEQGWLDALRKVHPQAQLFT 200 Query: 247 ANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 RN+ +D+ ++ + L D + SDH P+ I Sbjct: 201 FWDYRRNRWQRDAGLRLDHILLSGKLKRRLTGAGI-------DREIRGLEGASDHAPVWI 253 Query: 301 DY 302 Sbjct: 254 TL 255 >gi|94733763|emb|CAK05424.1| traf and tnf receptor associated protein, like [Danio rerio] Length = 383 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 43/294 (14%), Positives = 90/294 (30%), Gaps = 48/294 (16%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + K+ ++SWN++ L + L Y D+VFLQE+ Sbjct: 130 SEVEDSKLSIISWNVDGLDTLNLADRARG-----------LCSYLALYTPDVVFLQEL-- 176 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + + S++ T I +RK V+ L+ Sbjct: 177 ---------IPAYVQYLKKRAVSYLFFEGSDDGYFTGIMLRKSRVKFLESEIICFPTT-- 225 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R + V +G+K++++ HL+S ++Q + + I Sbjct: 226 ---QMMRNLLIAQVTFSGQKLYLMTSHLESC----------KNQSQERTKQLRVVLQKIK 272 Query: 197 QKKESLVPFVIAGDFNRKINY-------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + + AGD N + D W+ + + R+ + + N Sbjct: 273 E-APEDAIVIFAGDTNLRDAEVANVGGLPAGVCDVWEQLGKQE-HCRYTWDTKANSNKTV 330 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ D + + + + G+ SDH I ++ Sbjct: 331 PYVSRCRFDRIFLRSAKTAP--PVTPDHMALIGMEKLDCGRYTSDHWGIYCTFN 382 >gi|94732377|emb|CAK05007.1| novel protein similar to vertebrate TRAF and TNF receptor associated protein (TTRAP) [Danio rerio] Length = 387 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 43/294 (14%), Positives = 91/294 (30%), Gaps = 48/294 (16%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + K+ ++SWN++ L L Y D+VFLQE+ Sbjct: 134 SEVEDSKLSIISWNVDGLDTLN-----------LAERARGLCSYLALYTPDVVFLQEL-- 180 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + + S++ T I +RK V+ L+ Sbjct: 181 ---------IPAYVQYLKKRAVSYLFFEGSDDGYFTGIMLRKSRVKFLESEIICFPTT-- 229 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R + V +G+K++++ HL+S ++Q + + I Sbjct: 230 ---QMMRNLLIAQVTFSGQKLYLMTSHLESC----------KNQSQERTKQLRVVLQKIK 276 Query: 197 QKKESLVPFVIAGDFNRKINY-------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + + AGD N + D W+ + + R+ + + N Sbjct: 277 E-APEDAIVIFAGDTNLRDAEVANVGGLPAGVCDVWEQLGKQE-HCRYTWDTKANSNKTV 334 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ D + + + + + + G+ SDH I ++ Sbjct: 335 PYVSRCRFDRIFLRSAKTRPAV--TPDHMALIGMEKLDCGRYTSDHWGIYCTFN 386 >gi|330503362|ref|YP_004380231.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina NK-01] gi|328917648|gb|AEB58479.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina NK-01] Length = 262 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 81/287 (28%), Gaps = 51/287 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++R+++ N + LR + +D+VFLQE+ +A+ Sbjct: 19 KRLRVLTINTHKGFTALNRRF----------ILPELRSAVQATGSDLVFLQEVLGNHALH 68 Query: 82 KVFPKN-----TWCIFY-STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + S + + D H A+ + + + + + Sbjct: 69 AKRFHDWPSVPQYEFLADSMWPQFAYGRNAVYPDGHHGNALLSRFPILEHHNLDVTVSG- 127 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R + +++ G V + + + QQ L D + Sbjct: 128 ----TEQRGLLHCRLDVPGHD-AVHAVCVHLGLR-----------EAHRRQQIGLLLDLL 171 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + P ++AGDFN + + P+ F + + Sbjct: 172 ATFEP-DAPVIVAGDFNDWRLRAD------QQLAPHGLREAFEHRHGKPARSFPARMPWL 224 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + S LSDH P++ + Sbjct: 225 RLDRIYTRNASAHEPQVLS-----------TRPWSHLSDHAPLAAEI 260 >gi|303289617|ref|XP_003064096.1| predicted protein [Micromonas pusilla CCMP1545] gi|226454412|gb|EEH51718.1| predicted protein [Micromonas pusilla CCMP1545] Length = 332 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 88/322 (27%), Gaps = 44/322 (13%) Query: 25 RLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---- 78 R+ S+N+ + L + LDAD++ LQE+ +Y+ Sbjct: 13 RVTSYNVLAQCYVRSTLFPHSPKFALKWKRRGEKLTETLAALDADVLSLQEVDAYDEHWA 72 Query: 79 -AVAK----------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + + +F K + + + + Sbjct: 73 PWLKRRGYGGVYKQRTKLTNDKKDGCGLFFKRAKFELLARRAIEYNDVAYGRPAGYVKTG 132 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL-----LVEINGKKIWVLDIHLKSFC-F 169 + + + + R V + + + V + HL Sbjct: 133 AGAGEEEEGEGAGEVRNDERVPDARHVRDCVGVLALLRTKTDPRRTVLVANTHLFWDPTC 192 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLGNNDDFWKTI 228 D + C+ ++ + +D ++ + + P +IAGDFN + I Sbjct: 193 ADVKLSQAERLCAEVAHFMREHEDKLSPGESVASTPVIIAGDFNSVPGSEVHARMLRGII 252 Query: 229 -----DPNDSLIRFPK-EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + + E + N IDY + + + + Sbjct: 253 PGVEDGGGELKPAPTRPETGEPAHTNVTPGFTDCIDYVFVSDG--VDVTAAEPLPAIEHL 310 Query: 283 DDIKSRGKRLSDHCPISIDYDF 304 + SDH +++D F Sbjct: 311 GEGLPNENHPSDHLSVTVDVAF 332 >gi|330994641|ref|ZP_08318564.1| Exodeoxyribonuclease III [Gluconacetobacter sp. SXCC-1] gi|329758282|gb|EGG74803.1| Exodeoxyribonuclease III [Gluconacetobacter sp. SXCC-1] Length = 302 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 39/308 (12%), Positives = 83/308 (26%), Gaps = 67/308 (21%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +R+V+WNIN+L LL + D+V LQE +A+ Sbjct: 36 APDMRIVTWNINSL----------------RLRMPLLARLCAETAPDMVCLQETKVPDAL 79 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + L + +A+ + + + P A+ Sbjct: 80 ---------FPLEAVRALGFGHVAYRGMKGYNGVAILSRQPVQVLEDTPDWCARGDCRH- 129 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + + I V D ++ + D + +P + + + W + Sbjct: 130 -----LAVRHGSGETAIDVHDFYVPAG--GDIPDPDENPKFAHKLAFVEEARHWFS--AR 180 Query: 201 SLVPFVIAGDFNRKI--NYLGNNDDFWKTID-------------PNDSLIRFPKEKDSRC 245 ++ V+ GD N + + ++ K + + Sbjct: 181 AMRRTVLVGDLNIAPLEHDVWSHKQLLKIVSHTPAETERLLAWQQTGFIDAMRHFVPPAE 240 Query: 246 NANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ + + L + SDH Sbjct: 241 KLYTWWSYRNRDWSASDRGRRLDHVWVTPDLRDALRG-------MQVLRPARDWDKPSDH 293 Query: 296 CPISIDYD 303 P+ +D D Sbjct: 294 VPVIVDMD 301 >gi|319778623|ref|YP_004129536.1| Exodeoxyribonuclease III [Taylorella equigenitalis MCE9] gi|317108647|gb|ADU91393.1| Exodeoxyribonuclease III [Taylorella equigenitalis MCE9] Length = 266 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 83/308 (26%), Gaps = 74/308 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 +R+ S N+N L + Q+ DIV LQE+ + + Sbjct: 2 LRITSLNVNGLRSAFNKG---------------IVQWLSICKPDIVCLQEIKISAEDLTD 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + ++ +S A K G ++ Sbjct: 47 SLRSPLIYKSEFNHAERKGYSGVGIYLREELDSAYFKH------------GIENKEFDPE 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R ++ + K + V+ +L S D + + + E+ Sbjct: 95 GR-----VLSVYFKNLTVVSAYLPSGSSGDERQRAKFRFLDSFGPWIDAM---MRDHVET 146 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 +VI GD+N + ++ + F + Sbjct: 147 GHEYVICGDWNMAHKEIDLKNWKSNLKNSGFTPEEREWMNDLLERRGFVDVFRRL-CMEA 205 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + N+ IDY + +G+R SDH Sbjct: 206 DQYTWWSNRGQAWAKNVGWRIDYQIATPGIATLAKHAEI-----------YKGQRFSDHA 254 Query: 297 PISIDYDF 304 P++IDY+F Sbjct: 255 PLTIDYEF 262 >gi|326775401|ref|ZP_08234666.1| sphingomyelin phosphodiesterase [Streptomyces cf. griseus XylebKG-1] gi|326655734|gb|EGE40580.1| sphingomyelin phosphodiesterase [Streptomyces cf. griseus XylebKG-1] Length = 326 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 39/297 (13%), Positives = 91/297 (30%), Gaps = 31/297 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R++S+N S+ + + + D+V +QE A Sbjct: 37 SLRVLSYNAFIFSKTLY------PNWGQDHRAAEIPKTSFFRGNDVVVIQEAFDNGASDA 90 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGAK 134 + + Y T + + + + V ++ + + Sbjct: 91 LLRNSASPYPYQTPVVGRSKSGWDATGGSYAAATPEDGGVTILSRWPIVRKEQF-VFKDA 149 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 N+ ++ +NG ++ V+ H +S S + + S+Q + L + Sbjct: 150 CGGDWFSNKGFAYTVLNVNGARVHVVGTHAQSTDPGCSAG----QAAQVRSRQFKQLDAF 205 Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNA----N 248 + + V+AGDFN + + ++ P D+R N+ Sbjct: 206 LDAKNIPASEQVVVAGDFNVDGHAAEYASFLADAGLSAPETRTGHPYSFDTRDNSIAAER 265 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPIS 299 + +D+ + + ++ + S + LSDH P+ Sbjct: 266 YPDDPREDLDHVLHRTGHARPAGWKNEVIKEESAPWTVSSWGKDYTYTNLSDHYPVI 322 >gi|294941672|ref|XP_002783182.1| carbon catabolite repressor protein, putative [Perkinsus marinus ATCC 50983] gi|239895597|gb|EER14978.1| carbon catabolite repressor protein, putative [Perkinsus marinus ATCC 50983] Length = 320 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 43/341 (12%), Positives = 88/341 (25%), Gaps = 82/341 (24%) Query: 19 SVAQKVRLVSWNIN---------------TLSEQEGVSLWKNSVK--------RTTSDYT 55 S Q ++++ +NI L + + + Sbjct: 2 SQVQHLKVMQYNILGRHFAFSKYFSYAWPYLGGSKAKNFCPAAKDAPQLPTLLDWNMRLP 61 Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 +L + ADI+ L EM SY + + +++ R D +AI Sbjct: 62 MLVKTCLESSADILCLCEMDSYEDFRQALGS-YYDGYFAP--------RAGGRDDGSAIF 112 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLE 174 R+ ++++ R A ++ + G+ V+ HL Sbjct: 113 WRRSILKLMSAKTLHYTGGSE------RVAAICRLQNLYGQTFTVVGTHLYWKG------ 160 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND---------DFW 225 SC S + L + + P ++ GD N + Sbjct: 161 -----SCPTQSHEVDELTTELRAILDRDEPVILCGDLNNHRDSDTFMRIRDCGMEDCFTA 215 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVM---DQNAYKFLIQESFSEIL 279 + P P + IDY + + ++ + Sbjct: 216 AGLKPPRYTSLVPPSYVLSSRSGSYRLLPGREDEIDYIFVGGQSSDLTFKVVDAVAIDSC 275 Query: 280 YNE-----------------DDIKSRGKRLSDHCPISIDYD 303 +E + SDH P+ + + Sbjct: 276 NDETGNGVVTGADSRDSSVAERGIPNMSHASDHLPVMCEVE 316 >gi|172038905|ref|YP_001805406.1| exodeoxyribonuclease III [Cyanothece sp. ATCC 51142] gi|171700359|gb|ACB53340.1| exodeoxyribonuclease III [Cyanothece sp. ATCC 51142] Length = 262 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 39/306 (12%), Positives = 97/306 (31%), Gaps = 71/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ +WN+N + + + + N D++ LQE + + Sbjct: 1 MKIATWNVN----------------SIRTRQSHVINWLSNNSIDVLCLQETKVIDKDFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F + + ++ ++ N AI R+ ++ P++G + Sbjct: 45 EPFEELGYHVYIYGQKAYN----------GVAIFSRQPMTDIIMGFTPMVGEAIAQQFDE 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKE 200 +R + +++ I ++++++ + + S + Y Q Q LK ++ ++ Sbjct: 95 QKRVISGVID----GIRIINLYVPNGAAVGSEKYQYK------LQWFQVLKVYLDNLIQK 144 Query: 201 SLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 I GDFN + + + I F K Sbjct: 145 ESHELCICGDFNIALEDKDIYNSKGKENHIMSSPLEREALENILEIGLQDAFRKFTTEGG 204 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + ID+ + Y I + ++ + SDH Sbjct: 205 H-FSWWDYRSGGFQRNRGWRIDHLYLTNKLYGKAINCTIDIEPRKQE-------KPSDHT 256 Query: 297 PISIDY 302 P+ ++ Sbjct: 257 PVILEI 262 >gi|29375810|ref|NP_814964.1| hypothetical protein EF1237 [Enterococcus faecalis V583] gi|227518498|ref|ZP_03948547.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0104] gi|227553023|ref|ZP_03983072.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis HH22] gi|256958727|ref|ZP_05562898.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis DS5] gi|257078756|ref|ZP_05573117.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis JH1] gi|257419061|ref|ZP_05596055.1| predicted protein [Enterococcus faecalis T11] gi|294781151|ref|ZP_06746501.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis PC1.1] gi|307268651|ref|ZP_07550020.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX4248] gi|29343271|gb|AAO81034.1| conserved hypothetical protein [Enterococcus faecalis V583] gi|227074176|gb|EEI12139.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0104] gi|227177855|gb|EEI58827.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis HH22] gi|256949223|gb|EEU65855.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis DS5] gi|256986786|gb|EEU74088.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis JH1] gi|257160889|gb|EEU90849.1| predicted protein [Enterococcus faecalis T11] gi|294451829|gb|EFG20281.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis PC1.1] gi|306514963|gb|EFM83509.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX4248] gi|315031565|gb|EFT43497.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0017] gi|315035019|gb|EFT46951.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0027] gi|315166553|gb|EFU10570.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX1341] gi|315169918|gb|EFU13935.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX1342] gi|315575705|gb|EFU87896.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0309B] gi|315579851|gb|EFU92042.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0309A] gi|323480469|gb|ADX79908.1| endonuclease/Exonuclease/phosphatase family protein [Enterococcus faecalis 62] Length = 254 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 84/287 (29%), Gaps = 48/287 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+ V + + + + Q D + +QE+ Sbjct: 1 MKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138 Y+T ++ + AI ++ V+ + Y L Sbjct: 54 A--------YTTFTCLSAEREGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHPE 105 Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A+ L + V+++HL + + ++ + L D I Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNANKNLRNK 254 Q P ++ GDFN + + + K N + P+ K Sbjct: 158 QY-----PTLLMGDFNAE-SGEEVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAEL 211 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + + + G+ SDH P+ + Sbjct: 212 EEIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248 >gi|269123555|ref|YP_003306132.1| exodeoxyribonuclease III Xth [Streptobacillus moniliformis DSM 12112] gi|268314881|gb|ACZ01255.1| exodeoxyribonuclease III Xth [Streptobacillus moniliformis DSM 12112] Length = 251 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 31/301 (10%), Positives = 76/301 (25%), Gaps = 78/301 (25%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 +SWN+N L Y +I+ LQE+ + + Sbjct: 5 ISWNVNGLRACIKKGF---------------LDYFNEQKPNIIGLQEIKMSEGQLDLELE 49 Query: 87 NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146 + + + ++ A+ + + D R Sbjct: 50 GYYTYY-----------NYAEKKGYSGTAIFTDVEPISVSYGIGIEEHDKEGR------- 91 Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206 ++ + + + ++ + + + L++ P + Sbjct: 92 --VITAEFEDYYFVTVYTPNSKNELERLDYRMIWEDEFRSYLKKLEE--------KKPVI 141 Query: 207 IAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 + GD N + + + + N + F + +A Sbjct: 142 VCGDLNVAHKEIDLKNPKSNTRSAGFTIEERNKFTELIENGFIDTFRYFYPDKIHAYSWW 201 Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + IDYF + + L+ + + SDHCP+ + Sbjct: 202 SYRGNARKNNTGWRIDYFCVSSSLKDRLVDAEIHDKV-----------EGSDHCPVVLYI 250 Query: 303 D 303 + Sbjct: 251 N 251 >gi|157279947|ref|NP_001098489.1| deoxyribonuclease-1-like 2 [Bos taurus] gi|148743928|gb|AAI42237.1| DNASE1L2 protein [Bos taurus] gi|296473523|gb|DAA15638.1| deoxyribonuclease I-like 2 [Bos taurus] Length = 278 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 84/299 (28%), Gaps = 31/299 (10%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 L L+ L AS AQ +R+ ++NI + + ++ Q Sbjct: 5 LTLLAMLWALGASRAQALRIGAFNIQSFG--DSKVSDPGCGG-------VIAQILAGY-- 53 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D++ +QE+ + A E S+ + + V Sbjct: 54 DVMLVQEVRDPDLSAVSVLMEQINSVSRHEYNFVSSEPLGRDQYKEMYLFVYRKDTVSVV 113 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 + A +R + V G L + + + +L Sbjct: 114 DTYQYPDAE---DAFSREPFVVKVSAPGS----AATELVLIPLHAAPHHAVAEIDALYDV 166 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + W + GDFN Y+ D + ++ + Sbjct: 167 YLDVIDKW------GTDDILFLGDFNADCKYVREQDWPAIRLRSSEVFKWLIPDSADTTV 220 Query: 247 ANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 N + D V+ K L +S + + E+ + + L SDH P+ + Sbjct: 221 GNSDCAY----DRIVVCGSRLRKSLKHQSATVHDFQEEFGLDQTQALAISDHFPVEVTL 275 >gi|313637385|gb|EFS02862.1| exodeoxyribonuclease III [Listeria seeligeri FSL S4-171] Length = 251 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 83/304 (27%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L +Y ++DADI LQE A Sbjct: 1 MKLISWNVNGLRAAVKKGF---------------LEYFDSVDADIFCLQETK-LQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + Q + D R Sbjct: 45 LDLPAYKDYWN----------YAVKKGYSGTAIFTKTEPLSVQYGLGIPEHDDEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + K +++ ++ + + ++ + + Sbjct: 91 -----VITLEFDKFFMVTVYTPN-------SQAELKRLDYRMTFEDAILAYVKK-LDETK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + F +A Sbjct: 138 PVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFTAFLEAGFVDSFRYFYPDLEDAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + L+ + SDHCP+ Sbjct: 198 SWWSYRMNARARNTGWRIDYFVVSERLKDNLVDAKIHPDVL-----------GSDHCPVE 246 Query: 300 IDYD 303 ++ + Sbjct: 247 LELN 250 >gi|304404660|ref|ZP_07386321.1| Endonuclease/exonuclease/phosphatase [Paenibacillus curdlanolyticus YK9] gi|304346467|gb|EFM12300.1| Endonuclease/exonuclease/phosphatase [Paenibacillus curdlanolyticus YK9] Length = 313 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 77/291 (26%), Gaps = 32/291 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++ N+ L + + L D+V L E+ + + Sbjct: 38 PFSVMTHNMALLVPPAPYLGTDRDGA-----IAEIVARIRALAPDVVGLCEVFANGERKR 92 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + S D + + +L + A D + N Sbjct: 93 IRDA------LSDLYPHFREGPDEGDLESDGGLLLLSRHPLLAADAMIFRACDGWDCFAN 146 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + + + V+ I + + L Q + ++I +++ Sbjct: 147 KGVIHIRVQPASWPIPLDIFYSHM------QNIETDNGVGTLYAQLTTMNNFIVTRRDPA 200 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR----------CNANKNLR 252 +I GD N + + + D + S N + Sbjct: 201 GSQIIMGDLNIPGENQQHYAQLYDRLRLVDCWFLADNQATSGPTLVIENNFYANPDDRPS 260 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +DY +M I + + G+ +SDH + +D Sbjct: 261 SNHRLDYVLMRGGIRLVPILADIEVLKFQ-----HNGRFISDHFGVRASFD 306 >gi|302561304|ref|ZP_07313646.1| endonuclease/exonuclease/phosphatase [Streptomyces griseoflavus Tu4000] gi|302478922|gb|EFL42015.1| endonuclease/exonuclease/phosphatase [Streptomyces griseoflavus Tu4000] Length = 605 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 39/333 (11%), Positives = 86/333 (25%), Gaps = 69/333 (20%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + ++ + ++N+ L + + + K+ DIV L+E+ Sbjct: 295 STRPQHSTELAVATYNVENLDPSDDTFA---------AHAAAIVGNLKS--PDIVSLEEI 343 Query: 75 GSYNAVAK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 N + S + +I A Sbjct: 344 QDNNGATDDGTVAADRTLAMLIDAIEAAGGPRYDW-RSVDPADKQDGGQPGGNIRQAFLF 402 Query: 117 RKKNVRVLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGK 155 V + P S + +R+ + G+ Sbjct: 403 NPARVSFTDRPGGDATTPTEVTKVHGKAALTLSPGRVDPASEAFEDSRKPLAGEFSFRGR 462 Query: 156 KIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKE--SLVPFVIAG 209 + V+ H S +L + Y P S + QA+ + D+ + + V G Sbjct: 463 TVVVIANHFASKGGDQALTSQYQPPARSSETQRHLQAKAVHDFTAKILKTQKNAAVVALG 522 Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269 D N + + S + N +D ++ + +F Sbjct: 523 DINDFEFSETTDILEGR----GTLWSAIKSLPKSERYSYVYQGNSQALDQILITPSIRRF 578 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +++ ++SDH P + + Sbjct: 579 SYDSVHINAEFHD--------QISDHDPQILRF 603 >gi|189461973|ref|ZP_03010758.1| hypothetical protein BACCOP_02640 [Bacteroides coprocola DSM 17136] gi|189431367|gb|EDV00352.1| hypothetical protein BACCOP_02640 [Bacteroides coprocola DSM 17136] Length = 345 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 47/346 (13%), Positives = 92/346 (26%), Gaps = 60/346 (17%) Query: 2 IRKYVLALVFFLVPCTASVAQKVR-----LVSWNINTLSEQEGVSLWKN----------- 45 ++KY+ A + + A AQ+ + + +N+ L + + K+ Sbjct: 8 MKKYLFAFFWVCL-VIAGYAQEQKGTVYGVAFYNLENLFDTKHDEGKKDYEYLPDGRNKW 66 Query: 46 SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 K+ S + +L D ++ + E+ + + + + + Sbjct: 67 DDKKYQSKLKNMSTVLGSLATDKTPEGAAVIGMAEVENRHVLEDLLKQP---ALTDRGYE 123 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 I H + + A K V R R + ++ G+++ Sbjct: 124 IIHYEGPDERGVDCAFFYNPKLYTVTATKLVPYVLAQPTDR-PTRGFLIADGKLAGERVA 182 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 + H S SP+ Q + LKD + Q+ +S + VI GD N Sbjct: 183 FIVNHWPSR-------GAESPARERAGMQVRALKDSL-QRLDSKIKIVIMGDMNDDPMDK 234 Query: 219 GNNDDF-----WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI-- 271 + K + D + K D V N Sbjct: 235 SMAEALGAKREMKDVKKKDLYNPWWNTLAGGDGTLKYRGKWNLFDQIVFTGNFLNKRHKK 294 Query: 272 -----------------QESFSEILYNEDDIKSRGKRLSDHCPISI 300 + SDH P + Sbjct: 295 LSYFTHEIFKRDYLMQADGKYKGYPLRTQAGGRWMNGYSDHLPTVV 340 >gi|60682608|ref|YP_212752.1| hypothetical protein BF3139 [Bacteroides fragilis NCTC 9343] gi|265765950|ref|ZP_06093991.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|60494042|emb|CAH08834.1| putative exported protein [Bacteroides fragilis NCTC 9343] gi|263253618|gb|EEZ25083.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|301164084|emb|CBW23640.1| putative exported protein [Bacteroides fragilis 638R] Length = 339 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 40/342 (11%), Positives = 92/342 (26%), Gaps = 57/342 (16%) Query: 2 IRKYVLALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKN----------- 45 ++K ++A F L+ AQ + +N+ L + + + Sbjct: 1 MKKLIIAFNFLLLLAVGGRAQDHADGLYSVAFYNLENLFDTIHDTGKNDYEYLPDAAKGW 60 Query: 46 SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + ++ S L + L D + + E+ + + + + + Sbjct: 61 NSEKYRSKLKNLSKVLGELSRDKVPAGPAAIGVAEVENRRVLDDLIRQPE---LAAGGYR 117 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 H + I A+ K + L + + R + + E+ G K+ Sbjct: 118 YIHYEGPDKRGIDCALLYDPKQFTPHATALVLSTPFEGDTIHKTRGFLIVGGELAGDKVC 177 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 ++ H S + + + Q + LKD + + + + +I GD N L Sbjct: 178 LIVNHWPSRGAAEPVRV-------HAAMQVKALKDSLMRT-DPDLKLIIMGDLNDDPMDL 229 Query: 219 GN-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK----- 268 + + + +D D ++ + Sbjct: 230 SLAVLGAKKHVEDMTEDDLYNPWWVTLEDKGVGTLLYRGKWNLFDQIILSPTLLQATKGL 289 Query: 269 -------------FLIQESFSEILYNEDDIKSRGKRLSDHCP 297 F + + SDH P Sbjct: 290 KYDHNEVFMRDYLFQQDGKYKGAPLRTYGGRVWLDGYSDHLP 331 >gi|257452662|ref|ZP_05617961.1| hypothetical protein F3_06314 [Fusobacterium sp. 3_1_5R] gi|317059202|ref|ZP_07923687.1| DNAse I-like protein DHP2 [Fusobacterium sp. 3_1_5R] gi|313684878|gb|EFS21713.1| DNAse I-like protein DHP2 [Fusobacterium sp. 3_1_5R] Length = 274 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 91/303 (30%), Gaps = 42/303 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++ + L+F + + + + S+N+ L E D+ + + Sbjct: 1 MKLFYQCLLFLCLSIASFAQEAY-IASFNVLKLGESP-------------KDFETMAKTI 46 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRKKN 120 ++ D+V L+E+ + + ++ ++ + I+ + + A +K Sbjct: 47 EHF--DLVGLEEVITPEGLERLVKSLNKYTNHTWDYHISPFPVGTRKYKEYYAYVWKKDR 104 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 V L + + R +I + H Sbjct: 105 VTFLSSEGFYPDRE----KLFIREPYGANFQIGKFDFTFVLQHAVYGKSETER------- 153 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---RKINYLGNNDDFWKTIDPNDSLIRF 237 + Q + + + + +I GDFN + +D + I D I+ Sbjct: 154 -RAEAFQLVKVYRYFQDRNKKENDILIGGDFNLSAFDEAFSSLYEDKDQIIYGVDPRIKT 212 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ D + + + +S I + K ++SDH P Sbjct: 213 TIGMKKMANSY---------DNIFLSKKYTEEFTGKS-GAIDFTNRQYKVMRNKVSDHLP 262 Query: 298 ISI 300 + I Sbjct: 263 VFI 265 >gi|225459310|ref|XP_002284160.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 593 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 46/350 (13%), Positives = 96/350 (27%), Gaps = 58/350 (16%) Query: 12 FLVPCTASVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 + +S A ++S+NI + + + L DADI+ Sbjct: 221 IVFESQSSNADTFSVLSYNILSDIYASRSAHVKCPGWALAWEYRRKNLLLEITGYDADII 280 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 LQE+ S + PK T + T + +N I A ++ R + + Sbjct: 281 CLQEVQSDHLENYFKPKLTKRGYSVTYKKKALQVYTANQFISDGCATFFRHDRFKEITKY 340 Query: 130 LLGAKD------SFSRAGNRRAVELLVEINGKKIWVLDIHLKSF----------CFLDSL 173 L G R ++ + + ++ +++ C ++ Sbjct: 341 ELEFDKTALSVVEGLEPGQRTEGQIRLMKGNIALVIILERVENGSSLGAFQPRICVANTH 400 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF--------- 224 + Q L + + + +S +P +I GD N + Sbjct: 401 IYANPNLPDVKLCQVASLVNGLEKIAQSQIPILICGDMNSLPGSSDPHKFLVTGRICPVS 460 Query: 225 ----------WKTIDPNDSLIRFP--------------------KEKDSRCNANKNLRNK 254 + + S+ +E N + N Sbjct: 461 SKETADPLGIYNLLKLQHSIPLVSAYSSLLCSGRVKEDEKKKMNQETKEPVFTNLSGGNS 520 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +DY +N + + + S SDH + ++ F Sbjct: 521 STLDYIFHTENNLEVEGLLELLNSETVGEALPSP-LWSSDHIALMANFRF 569 >gi|167915276|ref|ZP_02502367.1| Metal-dependent hydrolase [Burkholderia pseudomallei 112] Length = 287 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 39/281 (13%), Positives = 77/281 (27%), Gaps = 58/281 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++R+ ++NI+ T S + L AD++ LQE+ + Sbjct: 1 ELRIATYNIHG-----------GLGAWTASAAERIAVVLDELRADVIALQEVP----LGG 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 V + + + + AV + + L SF Sbjct: 46 VRGADVLAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----SFGNRE 100 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R A++ +E + V+ HL S + S Q L + Sbjct: 101 PRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LAAFDTR 144 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 +P ++ GD N + F + + F + R +D Sbjct: 145 ALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS--LDRIW 193 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ++L+ + DH P+ Sbjct: 194 VHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 224 >gi|148556689|ref|YP_001264271.1| exodeoxyribonuclease III Xth [Sphingomonas wittichii RW1] gi|148501879|gb|ABQ70133.1| exodeoxyribonuclease III Xth [Sphingomonas wittichii RW1] Length = 285 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 39/313 (12%), Positives = 83/313 (26%), Gaps = 77/313 (24%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGS 76 K+++ SWNIN + ++RQ+ + DI+ LQE + Sbjct: 21 PPMAKLKIASWNIN----------------SVRARIDIVRQFLEEQQIDILCLQETKVRD 64 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 +F + F + +H +A+ K + ++ Sbjct: 65 DTFPFGMFRDLGYDHF-----------EINGQPMHHGVAIISKLPLHDHGRHDWQDNGEA 113 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 V + ++ I + ++++ + + Q+ +L I Sbjct: 114 RH-------VGVRLDCG---IRLENVYVPAG-----GDIADREVNPKFGQKLDFLGRMIR 158 Query: 197 QKKESLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKE 240 +E P ++ GDFN + + + +D + Sbjct: 159 WSEELREPTLLVGDFNIAPLECDVWSHKQLLDVVSHTPIEVETLGRLQASHDWVDLGRSF 218 Query: 241 KDSRCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + +D+ K E Sbjct: 219 VPPPARLYTWWSYRAQDWAASDRGRRLDHMWASPEVAKLATNHYVCEPC-------RSWI 271 Query: 291 RLSDHCPISIDYD 303 R SDH P+ + D Sbjct: 272 RPSDHIPLITELD 284 >gi|37993840|gb|AAR07002.1| sphingomyelinase [Bacillus thuringiensis] Length = 252 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 80/230 (34%), Gaps = 26/230 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYMK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230 Q + ++D+I + + + GD N N +KT+ Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHA 247 >gi|224371156|ref|YP_002605320.1| ExoA [Desulfobacterium autotrophicum HRM2] gi|223693873|gb|ACN17156.1| ExoA [Desulfobacterium autotrophicum HRM2] Length = 262 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 84/306 (27%), Gaps = 72/306 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +K+RLVSWN+N L K+ + LDAD++ LQE Sbjct: 4 KKLRLVSWNVNGLRAAVKKDFLKS---------------MEQLDADVLMLQE-------T 41 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K+ + +H S ++ +A + V + + D+ R Sbjct: 42 KLSEDQRTDEMLLVDGYDSHWAYSSVKKGYSGVAAYTRPVPLAVAPGIGIERFDNEGRI- 100 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E++ + + +++ + D A L+ Sbjct: 101 --------LELDFEDFILFNVYFPNGQMSDERLQYKMDFYEAFFAHADRLRK-------K 145 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 VI GDFN N L + + + F Sbjct: 146 GRSLVITGDFNTAHNEIDLKNPKPNSKRSGFLPVEREVLDRLVERGYVDTFRHFNPDTVK 205 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDYF + Q+ + SDHCP Sbjct: 206 -YSWWSYRFNARANNAGWRIDYFFVTQDIIDK---------GWVTRTFIDNDILGSDHCP 255 Query: 298 ISIDYD 303 + I+ Sbjct: 256 VGIELT 261 >gi|260881707|ref|ZP_05405068.2| exodeoxyribonuclease III [Mitsuokella multacida DSM 20544] gi|260848221|gb|EEX68228.1| exodeoxyribonuclease III [Mitsuokella multacida DSM 20544] Length = 253 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 33/303 (10%), Positives = 74/303 (24%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L ++ LDAD+ LQE + Sbjct: 3 MKCISWNVNGLRACLKKGFMES---------------FVKLDADVFALQETK-MQPEQAI 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++++ + + AV + + + D R Sbjct: 47 LDLPGYRQYWNSAERKGY----------SGTAVFSRIEPLAVTYGLGIEEHDHEGR---- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + + ++ + L ++ Sbjct: 93 -----VITLEFPDCYFVTVYTPNSKRGLERLAYRMEWEDAFRAYLVAL--------DAKK 139 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + F R Sbjct: 140 PVIVCGDLNVAHTEIDLKNPKTNHHNAGFTDEERGKFTELLDAGFIDTFRALYPDRTGIY 199 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYFV + + + ++ SDHCP+ Sbjct: 200 TWWSYLRKARDTNAGWRIDYFVTSARLREKIADATIHNEVF-----------GSDHCPVG 248 Query: 300 IDY 302 ++ Sbjct: 249 LEL 251 >gi|255280445|ref|ZP_05345000.1| exodeoxyribonuclease III [Bryantella formatexigens DSM 14469] gi|255268910|gb|EET62115.1| exodeoxyribonuclease III [Bryantella formatexigens DSM 14469] Length = 253 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 79/303 (26%), Gaps = 78/303 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +++SWN+N L +Y K DADI +QE Sbjct: 4 KMISWNVNGLRACVQKGF---------------LEYFKEADADIFCIQESKLQEG-QIEL 47 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 P + +++ + ++ AV K + + D R Sbjct: 48 PLEGYHQYWN----------YAKKKGYSGTAVFSKEEPLSVSYGIGIEEHDQEGR----- 92 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ + +++ ++ + + ++ +++ P Sbjct: 93 ----VITLEFDTYYLVTVYTPN-------SQNELARLPYRMTWEEAFLAYLKGLEKNK-P 140 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + GD N + + I N + + + Sbjct: 141 VIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEEREKFSQILENGFIDTYRYFYPEQEGVYS 200 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF + + L+ + SDHCP+ + Sbjct: 201 WWSYRFRAREKNAGWRIDYFCVSECLKDRLVDARIHTEIT-----------GSDHCPVEL 249 Query: 301 DYD 303 + Sbjct: 250 QIE 252 >gi|225077368|ref|ZP_03720567.1| hypothetical protein NEIFLAOT_02428 [Neisseria flavescens NRL30031/H210] gi|224951296|gb|EEG32505.1| hypothetical protein NEIFLAOT_02428 [Neisseria flavescens NRL30031/H210] Length = 261 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 92/287 (32%), Gaps = 47/287 (16%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---- 75 + V + S+N++ S + L +D++FLQE+ Sbjct: 2 SPRPVTITSYNMH----------KGMSALNRKVQVNRMADALGALGSDVLFLQEVQGQHL 51 Query: 76 SYNAVAKVFPKNTWCIFY-STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + I S + ++ K H A+ + + + + Sbjct: 52 NRSRRSDFPDAPHYDIIGDSLDYHRSYGKNAIYPKRHHGNAILSRLPLKTENNLNI---- 107 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 S ++ R + V G + ++ + + +Q + + D+ Sbjct: 108 -SVNKLEQRGLLHCEVVPEGWEDPLVCLCVHLNLREPD-----------RLKQYRAISDY 155 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + P +IAGDFN + + + +D N+ F R + Sbjct: 156 VGRYIRPESPLIIAGDFNDW--RQKSARELGRALDLNE---VFVDNTGKRPKTFPSRLPI 210 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + +D +++ +E + LSDH P+S+ Sbjct: 211 LSLDRIYTRN-----------LDVIDSEIHNSKDWQHLSDHLPLSVT 246 >gi|472869|emb|CAA54234.1| ARP protein [Arabidopsis thaliana] Length = 527 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 42/317 (13%), Positives = 87/317 (27%), Gaps = 78/317 (24%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE- 73 P + V++++WN+N L + Q A+ + DI+ LQE Sbjct: 258 PPLPEGTKCVKVMTWNVNGLRGLLKFESFSA------------LQLAQRENFDILCLQET 305 Query: 74 ---MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 + + K F+S + ++ A+ + + + Sbjct: 306 KLQVKDVEEIKKTLIDGYDHSFWS---------CSVSKLGYSGTAIISRIKPLSVRYGTG 356 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQ 189 L D+ R V ++++ ++ + L L LS + Sbjct: 357 LSGHDTEGRI---------VTAEFDSFYLINTYVPNSGDGLKRLSYRIEEWDRTLSNHIK 407 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP---------------NDSL 234 L+ P V+ GD N + + + Sbjct: 408 ELEK--------SKPVVLTGDLNCAHEEIDIFNPAGNKRSAGFTIEERQSFGANLLDKGF 459 Query: 235 IRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + +++ + +DYF++ Q+ + D Sbjct: 460 VDTFRKQHPGVVGYTYWGYRHGGRKTNKGWRLDYFLVSQSIAANVH-----------DSY 508 Query: 286 KSRGKRLSDHCPISIDY 302 SDHCPI + Sbjct: 509 ILPDINGSDHCPIGLIL 525 >gi|15227354|ref|NP_181677.1| ARP; DNA-(apurinic or apyrimidinic site) lyase [Arabidopsis thaliana] gi|8488963|sp|P45951|ARP_ARATH RecName: Full=Apurinic endonuclease-redox protein; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase gi|3241944|gb|AAC23731.1| DNA-(apurinic or apyrimidinic site) lyase (ARP) [Arabidopsis thaliana] gi|330254890|gb|AEC09984.1| apurinic endonuclease-redox protein [Arabidopsis thaliana] Length = 536 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 42/317 (13%), Positives = 87/317 (27%), Gaps = 78/317 (24%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE- 73 P + V++++WN+N L + Q A+ + DI+ LQE Sbjct: 267 PPLPEGTKCVKVMTWNVNGLRGLLKFESFSA------------LQLAQRENFDILCLQET 314 Query: 74 ---MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 + + K F+S + ++ A+ + + + Sbjct: 315 KLQVKDVEEIKKTLIDGYDHSFWS---------CSVSKLGYSGTAIISRIKPLSVRYGTG 365 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQ 189 L D+ R V ++++ ++ + L L LS + Sbjct: 366 LSGHDTEGRI---------VTAEFDSFYLINTYVPNSGDGLKRLSYRIEEWDRTLSNHIK 416 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP---------------NDSL 234 L+ P V+ GD N + + + Sbjct: 417 ELEK--------SKPVVLTGDLNCAHEEIDIFNPAGNKRSAGFTIEERQSFGANLLDKGF 468 Query: 235 IRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + +++ + +DYF++ Q+ + D Sbjct: 469 VDTFRKQHPGVVGYTYWGYRHGGRKTNKGWRLDYFLVSQSIAANVH-----------DSY 517 Query: 286 KSRGKRLSDHCPISIDY 302 SDHCPI + Sbjct: 518 ILPDINGSDHCPIGLIL 534 >gi|28881335|emb|CAD70338.1| conserved hypothetical protein [Neurospora crassa] Length = 291 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 36/297 (12%), Positives = 80/297 (26%), Gaps = 16/297 (5%) Query: 10 VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 + AS + +RL+++NI + + R + + N ++ Sbjct: 1 MLLANIGLASGSADLRLITYNIRYAATLLSTNEEP-WAVRRPLMASQVNFETSNRPEALI 59 Query: 70 FLQEMGSYNAVAKVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 +QE+ + V + W S +N Sbjct: 60 CMQEVLNEQLVDLQSDLGSNWNHVGVGRNDGAQDGEYSPIIYQADTWRLDRNKTYWLSQT 119 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 P + + A R + + ++ + F + S L+ + A Sbjct: 120 PHVVGSTGWDAALPRIVTVAQFKHRTTDVPLVFMCTH---FDHMGTVARNESAKLIIKIA 176 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRFPKEKDSR 244 P + GD N ++ GN ++ I + + Sbjct: 177 DEWM-VQGSNSTKPAPVFLGGDLNLELTEEGNKTLTTPGAFQDIKDLVPKTHWYGNAKTS 235 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + + + + IDY + + G +S+H P+ +D Sbjct: 236 TSFTTSTLDDMRIDYLFVRNPRGIQFSTYGVLTNKF------EDGVYISNHRPVVVD 286 >gi|332239562|ref|XP_003268970.1| PREDICTED: endonuclease/exonuclease/phosphatase family domain-containing protein 1 [Nomascus leucogenys] Length = 569 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 36/296 (12%), Positives = 78/296 (26%), Gaps = 35/296 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+ S V N R TLL K ++ +QE+ A+ K Sbjct: 261 LRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 311 Query: 84 FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKK-NVRVLQQSYPL 130 + + + + V + Sbjct: 312 CTELNQPTLPNIRKWKGPRGCWKAIVAEKPSNQLQKGAGYAGFLWDAAAGVELRDAGSQE 371 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + + ++ + ++++HL + L S + + S Sbjct: 372 SSPSNGHGKLAGPSPYLARFKLGSHDLTLVNLHLAALTLLGSENPSKNHSDGHR---LAS 428 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + + + +I GDF + + + I + + KN Sbjct: 429 FAQTLQETLKGEKDVIILGDFGQGPDSNDYD------ILRKEKFHHLIPAHTFTNISTKN 482 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302 + +D + ++ K I S+HCP+ + Sbjct: 483 PQGWKSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEL 538 >gi|237724358|ref|ZP_04554839.1| metallophosphoesterase [Bacteroides sp. D4] gi|229437227|gb|EEO47304.1| metallophosphoesterase [Bacteroides dorei 5_1_36/D4] Length = 324 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 81/309 (26%), Gaps = 71/309 (22%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K + L L +A +RL+++NI + + V D+ + Sbjct: 78 MKKTLPLLFTLLFALSAQSQNSLRLMTYNIKNANGMDDVC-----------DFQRIADVI 126 Query: 62 KNLDADIVFLQEMGSYN-------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 ++ ++V LQE+ S + ++ + +++ + I Sbjct: 127 NHIHPEVVALQELDSMTHRSGQKYVLGEIAGRTQMHAYFAP--------AIDYDGGKYGI 178 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + K + V ++ L G R R + + + Sbjct: 179 GLLTKEIPVSLKTMTLPG------REEARALIMAEFDN-------YIYCCTHLSLTEEDR 225 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 L+ PF +AGD N + Sbjct: 226 -------------MASLELIKDFAAAHKKPFFLAGDLNAEPESAFIKYL----------Q 262 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 F D + IDY + K S + SD Sbjct: 263 QDFQILSDVNQHTFPAPAPTETIDYITALKQNMKGFTVTSAQVVNEPV---------ASD 313 Query: 295 HCPISIDYD 303 H P+ I + Sbjct: 314 HRPLVIVLE 322 >gi|207723157|ref|YP_002253556.1| metal-dependent hydrolase protein [Ralstonia solanacearum MolK2] gi|206588351|emb|CAQ35314.1| metal-dependent hydrolase protein [Ralstonia solanacearum MolK2] Length = 289 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 84/305 (27%), Gaps = 50/305 (16%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAKVF 84 +++WNI +G D + A + DI+ LQE+ S Sbjct: 5 ILTWNIQWGRGADG-----------RVDLPRMLAEAHAMGPFDILCLQEVTSGFGHLPGQ 53 Query: 85 PKNTWCIFYST--------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 P + + I + + A+ + + + L D+ Sbjct: 54 PGDDQWRELAGALGHAFTLIDGIALERHEGTRIQRFGNAIVTRLPVLHVMRHALPCPADT 113 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A+E V+ + V+ HL+ + + + + + Sbjct: 114 SP-TMPRMAIEATVQAPFGPLRVISTHLEYYSETQRIAQIDALRALHVEGWMRVAHPPTL 172 Query: 197 QKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + + PF VI GDFN K + +L + Sbjct: 173 GPEPADGPFRPLAQTHATVICGDFNCKPDSTPKRLATVPFSHETATLYDAWEVAHGPAPQ 232 Query: 248 NKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 D+ ++ + + + + + + SDH P+ Sbjct: 233 PPTFGVHDRTGWTEPAYACDFMLISEPLKTRVARVEVNSVT-----------QASDHQPM 281 Query: 299 SIDYD 303 ++ + Sbjct: 282 LLELN 286 >gi|160886345|ref|ZP_02067348.1| hypothetical protein BACOVA_04355 [Bacteroides ovatus ATCC 8483] gi|299146829|ref|ZP_07039897.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] gi|156108230|gb|EDO09975.1| hypothetical protein BACOVA_04355 [Bacteroides ovatus ATCC 8483] gi|298517320|gb|EFI41201.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] Length = 399 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 40/342 (11%), Positives = 84/342 (24%), Gaps = 71/342 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67 R+VSWNI L + SL + + R + + + Sbjct: 64 SFRVVSWNIENLFDTHHDSLKNDHEYLPDAIRHWNYSRYKKKLADVARVITAIGEWNPPA 123 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 +V L E+ + + + ++ + N I A+ ++ ++L Sbjct: 124 LVGLCEVENDTVLRDLTRRSPLKELSYRYVMTNSPDL---RGIDVALLYQRDLFKLLSSR 180 Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL-LS 185 + R + + + + G + V H S Y + L Sbjct: 181 S--ISIPPFKQHRPTRDLLHVSGLLLAGDTLDVFVCHFPSRSGGAKESEPYRLYVAHILR 238 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT------------------ 227 + + + S +I GDFN Sbjct: 239 TEVDSIMN-----IRSHPQAIIMGDFNDYPTNQSILKILKAEAPPVKTNDLASTTDSANA 293 Query: 228 -----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK-------------- 268 + K K + K +D+ ++ Sbjct: 294 STVTPSSLKLYHLLARKAKSKNFGSYKFRGEWGLLDHLIVSGTLLNQSNHFFTSEEKANV 353 Query: 269 -------FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + + +SDH PI D++ Sbjct: 354 CLLPFLLKDDEKYGDKEPFRTYKGMKYQGGISDHLPIYTDFE 395 >gi|52140457|ref|YP_086372.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus E33L] gi|51973926|gb|AAU15476.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus E33L] Length = 352 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 105/324 (32%), Gaps = 64/324 (19%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T + + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117 LQE+ + + F N S + + ++ Sbjct: 110 LQEVDIKSM--RSFDVNGHEFLKKGLPDYASSFGKNYDTKWVPVPITSPMGYAEAGLSTF 167 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLE 174 K + L G + R + R VE + +N GK + ++++HL + Sbjct: 168 SKYTVQTANRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA-------- 219 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 Y + QQ ++LK ++ + E ++ GD+N+ ++ + +D + P + Sbjct: 220 --YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWLV 277 Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278 D + ID F++ N ++ ++ Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 335 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P+S + Sbjct: 336 KFEN----------SDHNPVSAVF 349 >gi|262190835|ref|ZP_06049057.1| extracellular nuclease-related protein [Vibrio cholerae CT 5369-93] gi|262033284|gb|EEY51800.1| extracellular nuclease-related protein [Vibrio cholerae CT 5369-93] Length = 869 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 48/373 (12%), Positives = 89/373 (23%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R ++ + LDADIV L E Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116 + + S R D I T + Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162 R K V++ Q + ++ + R + ++ G KI V Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652 Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211 H KS + + L Q + VI GD Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712 Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243 N D I + + K Sbjct: 713 NSYGMEDPMLVLTDYTSEKYGKTIRAARNTYIAGVEQFGDSGAEIKHSYGYLNAVAMKHP 772 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290 + +D+ ++ + ++ + I E + Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 833 RASDHDPAVLELN 845 >gi|260173521|ref|ZP_05759933.1| hypothetical protein BacD2_16735 [Bacteroides sp. D2] Length = 399 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 40/342 (11%), Positives = 84/342 (24%), Gaps = 71/342 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67 R+VSWNI L + SL + + R + + + Sbjct: 64 SFRVVSWNIENLFDTHHDSLKNDHEYLPDAIRHWNYSRYKKKLADVARVITAIGEWNPPA 123 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 +V L E+ + + + ++ + N I A+ ++ ++L Sbjct: 124 LVGLCEVENDTVLRDLTRRSPLKELSYRYVMTNSPDL---RGIDVALLYQRDLFKLLSSR 180 Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL-LS 185 + R + + + + G + V H S Y + L Sbjct: 181 S--ISIPPFKQHRPTRDLLHVSGLLLAGDTLDVFVCHFPSRSGGAKESEPYRLYVAHILR 238 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT------------------ 227 + + + S +I GDFN Sbjct: 239 TEVDSIMN-----IRSHPQAIIMGDFNDYPTNQSILKILKAEAPPVKTNDLASTTDSANA 293 Query: 228 -----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK-------------- 268 + K K + K +D+ ++ Sbjct: 294 STVTPSSLKLYHLLARKAKSENFGSYKFRGEWGLLDHLIVSGTLLNQSNHFFTSEEKANV 353 Query: 269 -------FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + + +SDH PI D++ Sbjct: 354 CLLPFLLKDDEKYGDKEPFRTYKGMKYQGGISDHLPIYTDFE 395 >gi|224005124|ref|XP_002296213.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|209586245|gb|ACI64930.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 2172 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 51/339 (15%), Positives = 91/339 (26%), Gaps = 56/339 (16%) Query: 17 TASVAQKVRLVSWNINTLSE--QEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDAD 67 SV +LVS N+ +G R + L + +DAD Sbjct: 512 PPSVGGVYKLVSANVLNFFPTLDDGSKTANGQSPRGADNADELSRQQAKLVKALLEMDAD 571 Query: 68 IVFLQEMGSY-------NAVAKVFPKNTWCIFYSTERLINHSKRDSN--NDIHTAIAVRK 118 I+ L E+ + NAV + + IN + + + I + + Sbjct: 572 IIGLLELENDFLPGSSGNAVEFLVNEMNTVAGNGKYAWINPGSQFIDTSDAISSGFIYKS 631 Query: 119 KNVRVLQQSYPLL----------GAKDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSF 167 + + S +L NR + + + + I V H KS Sbjct: 632 SSFEAIVGSVGILRDDSLAGLGMSGPIFDGVTTNRATIAVSFKPVKQPCITVALNHFKSK 691 Query: 168 CFLDSLENTYSPSCS-----LLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGN 220 + N + + AQ + W+ + S I GD N Sbjct: 692 GGSGTGNNADNSDGVGNYNGMRVLAAQAVTSWLNTEPTGISCKQTAIIGDLNSYAKEDPI 751 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 + I+ K + +DY +++ + + I Sbjct: 752 -----RYIEGVGYTDVERKFNGENAYSYVFDGQIGTLDYVLVNPLLLNNVRGAATWSINS 806 Query: 281 NEDDIKSRG---------------KRLSDHCPISIDYDF 304 +E R SDH I + F Sbjct: 807 DEPTALDYNTDFGKDTLIFDASVPYRFSDHDAIIVGIGF 845 >gi|160933576|ref|ZP_02080964.1| hypothetical protein CLOLEP_02430 [Clostridium leptum DSM 753] gi|156867453|gb|EDO60825.1| hypothetical protein CLOLEP_02430 [Clostridium leptum DSM 753] Length = 261 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 78/304 (25%), Gaps = 77/304 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R +SWN+N L ++ + +DADI LQE + Sbjct: 11 PMRFISWNVNGLRACLTKGFP---------------EFFQQIDADIFCLQETKLQQGQVE 55 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + S ++ AV K + + D R Sbjct: 56 MVLPGYRQYWNSAV-----------KKGYSGTAVFSKKEPLSVSYGLGIEEHDQEGR--- 101 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 ++ + ++ ++ + S + +D++ +S Sbjct: 102 ------VITLEFPAFYLTTVYTPNSQEG-------LKRLSYRMEWEDAFRDYLKG-LDSK 147 Query: 203 VPFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCNA-------N 248 P V+ GD N + + + + + Sbjct: 148 KPVVVCGDMNVAHQEIDLKNPKTNRKNAGFTDEERERFSQLLAAGFIDSYRSLYPEKIEY 207 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ + + SDHCP+ Sbjct: 208 SWWSYRFNARKNNAGWRIDYFLVSDRIGGRIQDAKIHTQV-----------MGSDHCPVE 256 Query: 300 IDYD 303 +D D Sbjct: 257 LDLD 260 >gi|282904664|ref|ZP_06312539.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus C160] gi|282909332|ref|ZP_06317148.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus WW2703/97] gi|283958776|ref|ZP_06376222.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus A017934/97] gi|282326900|gb|EFB57197.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282594913|gb|EFB99889.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus C160] gi|283789816|gb|EFC28638.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus A017934/97] Length = 274 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 81/278 (29%), Gaps = 28/278 (10%) Query: 43 WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE------ 96 + N + + Y K + D+V E A K+ Y T Sbjct: 2 YPNWGQYKRAYLIGQSSYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQ 59 Query: 97 --RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 S +A+ K + + F N+ V +E NG Sbjct: 60 SGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNG 118 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNR 213 K + V+ H +S DS + ++Q + + D++ + I GD N Sbjct: 119 KNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNV 174 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK 268 D K ++ ND L N +DY D++ + Sbjct: 175 N-KGTEEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQ 233 Query: 269 --FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300 L+ E +E D + SDH PI Sbjct: 234 PKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 271 >gi|269127256|ref|YP_003300626.1| endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM 43183] gi|268312214|gb|ACY98588.1| Endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM 43183] Length = 235 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 79/279 (28%), Gaps = 51/279 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R++S+NI D L + + AD+V LQE+ ++ Sbjct: 4 LRVLSYNIR----------------SMRDDRAALVRVIRACAADLVCLQEVP------RL 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P R +A + VR+ + LL R R Sbjct: 42 APTWRARRRALAARTGLTVACGRRAAGLAVLA--GRRVRLHHAEHHLLSRVPGLHR---R 96 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ EI G ++ V D HL + + L+ A+ L + Sbjct: 97 GLALVVAEIAGARVIVADTHL------------DLDASARLAHTAELLALLKRARDRYEA 144 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 P V+ GD N + W + + + R ID D Sbjct: 145 PVVLCGDINEEPEGPS-----WNALT-GFFTDAYAAAPRGPAATYSSRRPARRIDGIFTD 198 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ D R SDH P+ + Sbjct: 199 PRI--EVLGCGLPPGPAPAADYP----RASDHLPVLAEL 231 >gi|152990892|ref|YP_001356614.1| exodeoxyribonuclease III [Nitratiruptor sp. SB155-2] gi|151422753|dbj|BAF70257.1| exodeoxyribonuclease III [Nitratiruptor sp. SB155-2] Length = 262 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 81/301 (26%), Gaps = 73/301 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAK 82 +++ ++N+N+++ + L++++ + DI+ LQE+ Sbjct: 1 MKIATFNVNSIN----------------ARLELVKRWLSEKNPIDILCLQEIKCEEN--- 41 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + +A+ K Q G D F Sbjct: 42 -------RFPFKDFEELGFQCAVFGQKAYNGVAICSKYGFEEVQK----GFGDPFWDGQK 90 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R ++ +++ F LK+++TQ Sbjct: 91 RF-----IQAKINGTHFCNVYAPHGDFDGEKHIYKLQFFKH-------LKEYMTQFDLKK 138 Query: 203 VPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 V+ GD N I ++ + + ++ + F + Sbjct: 139 ENIVVVGDMNVAREDIDVWDAELLRNTIGFMDDEREAFEDFLSIGLVDLFRECH-PDTKQ 197 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 K + IDY + + I + K R SDH P+ Sbjct: 198 FTWWDYKNGAVWRDEGMRIDYILTSPAMKERCES-----IEVDMWTRKRRSPTPSDHAPV 252 Query: 299 S 299 Sbjct: 253 V 253 >gi|116695510|ref|YP_841086.1| metal-dependent hydrolase [Ralstonia eutropha H16] gi|113530009|emb|CAJ96356.1| Metal-dependent hydrolase [Ralstonia eutropha H16] Length = 243 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 34/282 (12%), Positives = 76/282 (26%), Gaps = 56/282 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +VS+NI+ + + + LDADIV LQE+ S ++ Sbjct: 1 MTVVSYNIHRAVGTDR-----------RYRPDRIATVLEELDADIVALQEVESGSSNDHT 49 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + T + + A+ + L R Sbjct: 50 LE----YLAGHTGMHVVSGFTRVRGNADYGNALLARFAPQAVNQIDLTVKGC-----EPR 100 Query: 144 RAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 A+++ + +G + + I +Q Q L +++ Sbjct: 101 GAIDVTLACTASGWESALRVIATHLGLRPGE-----------RRRQVQQLLNYVA--AAP 147 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 +P ++ GD N + + + ++ +D Sbjct: 148 PLPTILLGDVNEWFLWGRPLRWLHAYFE---------HAPHTATFPSRWPVF--ALDRIW 196 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + A ++ + SDH P+ ++ Sbjct: 197 VSPRA----------HLVSVASHRSPLARVASDHLPLLARFE 228 >gi|332527156|ref|ZP_08403231.1| exodeoxyribonuclease iii, ap endonuclease, family 1 [Rubrivivax benzoatilyticus JA2] gi|332111582|gb|EGJ11564.1| exodeoxyribonuclease iii, ap endonuclease, family 1 [Rubrivivax benzoatilyticus JA2] Length = 258 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 79/304 (25%), Gaps = 72/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N T+ L ++ D+ LQE+ + + Sbjct: 1 MKIATFNVNG----------------ITARLPRLLEWLAESAPDVACLQELKTSDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +AV + + +++ L G D Sbjct: 41 ------TFPLQAIEAAGYGAIWHGQKGFNGVAVLARGQQPVERLRGLPGDPDDTHSRY-- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E ++ V ++L + + Y + Q L + Sbjct: 93 ------LEAQVGELIVGALYLPNGNPQPGPKFDYK------LKWMQRLHEHAATLVGLDA 140 Query: 204 PFVIAGDFNRKINYL-----------------GNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P V+AGD+N + ++ + Sbjct: 141 PVVLAGDYNVVPTDAVRDIYSPKGWQNDALLQPESRQAYQRLLELGFTDALATLHGDAAM 200 Query: 247 ANKNLRNKIP--------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ +++ A L D ++ SDH P+ Sbjct: 201 YTYWDYFRQRWERNAGLRIDHLLLNAPAAARLKAAEV-------DRFIRGREKPSDHAPV 253 Query: 299 SIDY 302 +D Sbjct: 254 WVDL 257 >gi|257086588|ref|ZP_05580949.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis D6] gi|256994618|gb|EEU81920.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis D6] gi|315027790|gb|EFT39722.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX2137] Length = 254 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 41/286 (14%), Positives = 84/286 (29%), Gaps = 46/286 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+ +E + W + Q D + +QE+ Sbjct: 1 MKIATYNVRVDTEYDQDWQWFFRK-------EAVCQLINFHDWSLCCIQEVRPNQVRDLK 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138 Y+T ++ + AI ++ V+ + Y L Sbjct: 54 A--------YTTFTCLSAEREGDGQGEGLAILYNEQKVKAIDTGYFWLSETPQQPSIHPE 105 Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A+ L + V+++HL + + ++ + L D I Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-PKEKDSRCNANKNLRNKI 255 Q P ++ GDFN + + K D + + P+ K Sbjct: 158 QY-----PTLLMGDFNAESGEAVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAELE 212 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + + + G+ SDH P+ + Sbjct: 213 EIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248 >gi|260941043|ref|XP_002614688.1| hypothetical protein CLUG_05466 [Clavispora lusitaniae ATCC 42720] gi|238851874|gb|EEQ41338.1| hypothetical protein CLUG_05466 [Clavispora lusitaniae ATCC 42720] Length = 291 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 39/297 (13%), Positives = 80/297 (26%), Gaps = 43/297 (14%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL---DADIVFLQ 72 + + K+RL + NI + G + Q + + +V LQ Sbjct: 26 ASPAPPMKIRLYTHNIRYDNRNPGAGEPY-----WEKRGPAVAQSIRFHTQPGSSVVCLQ 80 Query: 73 EMGSYN---AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 E+ + + + + W + + T V +Y Sbjct: 81 EVLHHQLFGLLDTLNRHDDWSYYGVGRTDGKTQGEYAPILFKT-----NDWEVVRSHTYW 135 Query: 130 LLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 L + + A R E+++ K V ++ F S L++ Sbjct: 136 LSPTPEKPSKGWDAALERIVTEVVLRSKASKKHVKVMNTH---FDHVGVEARRESARLIA 192 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + + P + GDFN + + + + + Sbjct: 193 AKMEQ----------GSEPVFLCGDFNTEPTDEPYHVLQSTGFKDSRVQGKGYGYGSTFS 242 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N+ + IDY + + + +SDH P+ DY Sbjct: 243 GFNRKNEDNTIIDYIWAGNDTQ--------WQDYGVVPNF--YDFYMSDHRPVIADY 289 >gi|213965056|ref|ZP_03393254.1| exodeoxyribonuclease III [Corynebacterium amycolatum SK46] gi|213952170|gb|EEB63554.1| exodeoxyribonuclease III [Corynebacterium amycolatum SK46] Length = 265 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 77/306 (25%), Gaps = 68/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ WN+N + + + + D D++ +QE + Sbjct: 1 MRICVWNVN----------------SARTRLDRMVEMLRRNDIDVLAVQETKCKDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 +T + + + +A+ + Q+ + Sbjct: 41 ------QFPTATFEELGYQVAHHGLNQWNGVAIISRVGLEDIQAGFPGQPGFNKDPDATP 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ--AQWLKDWITQKKES 201 + + V +++ + + Y +Q L D + Sbjct: 95 SLEARHIAATCGGVRVHSLYIPNGRDITDPHFEYKLEFLERLRQHIIATLDD------DP 148 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 F++ GDFN + ++ + N Sbjct: 149 EATFMMGGDFNIAPTDGDVWSMAAFTGKTHVTPPERAAFYALEQAGMKEVTRQFTP---N 205 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 K + ID+ + D + +GK SDH P Sbjct: 206 QWTYWDYKAGRFFKDEGMRIDFQLASPALATKASAGFI-------DIEERQGKGASDHAP 258 Query: 298 ISIDYD 303 + +DY+ Sbjct: 259 VIVDYE 264 >gi|85375599|ref|YP_459661.1| metal-dependent hydrolase [Erythrobacter litoralis HTCC2594] gi|84788682|gb|ABC64864.1| metal-dependent hydrolase [Erythrobacter litoralis HTCC2594] Length = 233 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 80/285 (28%), Gaps = 65/285 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------S 76 ++ + S+NI+ + D + + LDADI+ LQE + Sbjct: 2 QLTVASYNIHKAVGTDR-----------RRDPARIVSVLRELDADIIALQEADLRFGQRA 50 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + W +R + A+ VR+ V ++ L Sbjct: 51 SVLPRALLDDTPWKAVAVAKRPRSLGWHG------NALLVRRGMEIVDSEALDLP----- 99 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A + V+ HL S S Q + + + Sbjct: 100 --MLEPRGAACADIANGKGAFRVVGTHLDL-------------SGVRRSDQIRTILAHL- 143 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + +P ++ GDFN+ + D ++ S + + R Sbjct: 144 HRAHPDMPEILMGDFNQW----SVRSGAMRVFDEKWQVL-------SPGPSFPSRRPIAR 192 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 +D + +++ + + SDH PI Sbjct: 193 LDRIALSPQ----------WQVVGQGVHHSALSAQASDHLPIWAT 227 >gi|326799553|ref|YP_004317372.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] gi|326550317|gb|ADZ78702.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] Length = 649 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 37/284 (13%), Positives = 79/284 (27%), Gaps = 43/284 (15%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + +++S+N+ + + +RQ + D+ +QE + Sbjct: 80 ASGNPFKVLSFNVRH--------HDDSDPQSIDERKGSIRQIIVDNAPDVFGVQEFSDDS 131 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 F + + + + + T A+ KNVR Q G + Sbjct: 132 FET---------WFRAQMADLGYGEYYDTSITGTPKAIFYKNVRFSLQR---SGTSRLGA 179 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 A ++++ + S ++ + A+ L + Q+ Sbjct: 180 SPIINTATWVVLQDKITSNRYFISNSHWQY----------DSQAIRIENAKALAALVKQE 229 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 +P ++ GDFN K + D + + +D Sbjct: 230 NTDNLPVIVFGDFNAKPGITE----ILNLKNELDVVDALGDSSGDYTFHGWDATGSSKLD 285 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + D++ G SDH PI Y Sbjct: 286 WIMSDRSMAF---------TSSRVITTSYNGYWPSDHWPIIATY 320 >gi|307323928|ref|ZP_07603137.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger Tu 4113] gi|306890377|gb|EFN21354.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger Tu 4113] Length = 303 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 33/283 (11%), Positives = 73/283 (25%), Gaps = 35/283 (12%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 ++++N+ + ++R+ + ++ QE Sbjct: 50 VMTFNLRYAG--------DSEPNSWGRRRPVMRELLRRARPHLLGTQEGLYGQLRDIAHD 101 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + T R+ T + P + +++ A R Sbjct: 102 LGQRYAWIGTGRMGGSRDEFMAVFYDTGRLEPVEYDHFWLSDTPNVIGSNTWGGAVVRMV 161 Query: 146 VELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + G++ + L+ HL S + A + + + +S + Sbjct: 162 TWVRFHDRRTGEEFYALNTHLDH------------RSQNARDHAAALITERL-GGLDSAL 208 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK-EKDSRCNANKNL--RNKIPIDYF 260 P ++ GDFN + D DS + + ID+ Sbjct: 209 PRIVTGDFNVAAHGNPVYDAMLHGGTLVDSWDTAERRGPLYGTFHGFGPLVPDGDRIDWI 268 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + D G+ SDH P+ + Sbjct: 269 LTSP---------GVRTHHAVIDTYSGDGQYPSDHLPVRTVLE 302 >gi|168209710|ref|ZP_02635335.1| exodeoxyribonuclease III [Clostridium perfringens B str. ATCC 3626] gi|168217871|ref|ZP_02643496.1| exodeoxyribonuclease III [Clostridium perfringens NCTC 8239] gi|170712212|gb|EDT24394.1| exodeoxyribonuclease III [Clostridium perfringens B str. ATCC 3626] gi|182380111|gb|EDT77590.1| exodeoxyribonuclease III [Clostridium perfringens NCTC 8239] Length = 250 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 39/299 (13%), Positives = 75/299 (25%), Gaps = 78/299 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L Y K+ DADI LQE Sbjct: 1 MKLISWNVNGLRACVKKGF---------------LDYFKSEDADIFCLQETKLQEG-QID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + G R Sbjct: 45 LDLEGYHQYWNYAEKKGY----------SGTAIFTKKEPLNV----YYGINMEHHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + L S Sbjct: 91 -----VITLEFEDFFMVTVYTPNSQSELARLEYRMEWEDDFRNYLLEL--------SSKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GD N D + T+ + + F Sbjct: 138 GVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDKFSTLLSSGFIDTFRYFNPDIEGVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF++ N + + S + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEASIDTEIL-----------GSDHCPV 245 >gi|146279157|ref|YP_001169316.1| exodeoxyribonuclease III Xth [Rhodobacter sphaeroides ATCC 17025] gi|145557398|gb|ABP72011.1| exodeoxyribonuclease III Xth [Rhodobacter sphaeroides ATCC 17025] Length = 262 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 32/306 (10%), Positives = 69/306 (22%), Gaps = 71/306 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L +WNIN L+ + DI+ LQE S + Sbjct: 2 TFTLATWNIN----------------SVRLREALVSRLLTEEMPDILCLQECKSPV---E 42 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 P + + +A+ K V + + Sbjct: 43 KMPLEAFRALGYNWC------VARGQKSYNGVAILSKLPLVDAGDHDFADLGHARH---- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V + G + + + ++ + D + + ++DW Sbjct: 93 ---VSATL---GNGVTIHNCYVPAG--GDIPDREQNVKFGQKLDYLTRMRDWCRSDTPRK 144 Query: 203 VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N ++ D + + I ++ Sbjct: 145 A--ILVGDLNIAPREDDVWNHKALLKIVSHTPIEVDHLNALMEAGAWIDVTRKDLPEGRL 202 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + SDH P Sbjct: 203 YSWWSYRSPDWEAADKGRRLDHIWATPDIANAAHGS-------RILRAARGWLQPSDHAP 255 Query: 298 ISIDYD 303 + +D Sbjct: 256 VFATFD 261 >gi|315178934|gb|ADT85848.1| extracellular nuclease-related protein [Vibrio furnissii NCTC 11218] Length = 877 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 49/377 (12%), Positives = 95/377 (25%), Gaps = 98/377 (25%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDADIVFLQE 73 +R+ S+N+ N + G ++ R S+ + LDADIV L E Sbjct: 474 GDLRIASFNVLNYFNSPYGGDANQHGDNRGASNLTEFSLQQAKIVNAILRLDADIVGLME 533 Query: 74 MGSY-----NAVAKVFPKNT---------WCIFYSTERLINHSKR---DSNNDIHTAIAV 116 + + A+ ++ + + + ++ I T + Sbjct: 534 IENNGFGEGAAIRQLVDQLNERLDDKKKRYQFVAVDSNQDGQTDEKDSVGSDAITTGVIY 593 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162 R K V++LQ + ++ + R + ++ G I V Sbjct: 594 RDKVVKLLQSRVIPMPSQQAPEVLNEEGKVIEDGQNYQRDTLAPTFQVKGGNETITVAVN 653 Query: 163 HLKS--------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208 HLKS + + A L + + + VI Sbjct: 654 HLKSKGSACWEDAAPVSEGGQGGEDADLQGSCENFRVAGAVALGEALAKIDGHK---VIL 710 Query: 209 GDFNRKINYLGN-----------------------------NDDFWKTIDPNDSLIRFPK 239 GD N DD L Sbjct: 711 GDMNSYGKEDPMLVLTDYTPEKYGKVIQAARNTVIGDQPQFGDDGAVITQGFGYLSAMEL 770 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG---------- 289 + +D+ ++ + ++ I E + Sbjct: 771 AHKDNSWSYSYNDEVGALDHLLVSDSLKLRVVDAMDWHINGGESTLFDYNDEYKGDLPKY 830 Query: 290 ---KRLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 831 ADHFRASDHDPAVVELN 847 >gi|296282147|ref|ZP_06860145.1| exonuclease III [Citromicrobium bathyomarinum JL354] Length = 265 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 35/308 (11%), Positives = 81/308 (26%), Gaps = 73/308 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81 V + +WNIN L+ Q+ D++ LQE+ A Sbjct: 2 VSVTTWNIN----------------SVRLRMPLVEQFLTAQAPDVLCLQEIKCVEEQFPA 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K F + + +A + + D Sbjct: 46 KAFRDLGYDHIA-----------IHGQKGYHGVATVSRLPFREFSRH------DWQDNGE 88 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R L + + + + ++++ + + + Q+ +L+ + Sbjct: 89 ARHIGVQLTDPVHQGMVIENVYVPAGGDVPD-----REVNAKFGQKLDFLERMTRWAETV 143 Query: 202 LVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245 P +I GDFN + + +D + + + Sbjct: 144 EQPTLIVGDFNIAPLESDVWSHKQLLKVVSHTPIEVEALQRFMDAHGWTDIGREHVPAPE 203 Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ + K + + E +R SDH Sbjct: 204 RYYSWWSYRNPNWQTNDKGRRLDHMWASPDLAKQATRHTILEE-------ARNWERPSDH 256 Query: 296 CPISIDYD 303 P++ +++ Sbjct: 257 VPLTTEFE 264 >gi|260593422|ref|ZP_05858880.1| AP endonuclease domain protein [Prevotella veroralis F0319] gi|260534698|gb|EEX17315.1| AP endonuclease domain protein [Prevotella veroralis F0319] Length = 367 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 80/302 (26%), Gaps = 65/302 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++++S+N+ E + N + Y + AD+V LQE Sbjct: 100 GAIKVLSYNVYMFDSWEETNPKTNP----------IVNYIIDSKADLVCLQEAQGDGDKN 149 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K + + ++ + + + + Q + P + + Sbjct: 150 GGIYKRLKAHYPYFKLMVKKKPGADY------MVLLSRYPILWQDTIPYGSSSNQS---- 199 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------- 178 A + ++ K + V + + D S Sbjct: 200 --VAYMVDIK-GTKTLVVNNHFESNGLSNDDKAGFKSLVKGRMRTNKAKSESVHLLRKLG 256 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + QA + ++ Q + VP ++ GDFN + + + + F Sbjct: 257 KVSMRRAPQADMVARYVKQYLDKKVPIILCGDFNDNPLSYTHR------VIDKELIDCFV 310 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + ID+ + + D SDH PI Sbjct: 311 ASGNGPGISYHRSGMYFRIDHIFCSDDFEPY-------------DAHVDNSVTASDHYPI 357 Query: 299 SI 300 Sbjct: 358 YC 359 >gi|259419109|ref|ZP_05743026.1| exodeoxyribonuclease III [Silicibacter sp. TrichCH4B] gi|259345331|gb|EEW57185.1| exodeoxyribonuclease III [Silicibacter sp. TrichCH4B] Length = 333 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 40/298 (13%), Positives = 81/298 (27%), Gaps = 65/298 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ S+NIN + L + D+ LQE+ S V + Sbjct: 1 MKIASFNING----------------IKARVNALADWLDEAQPDVAVLQEIKS---VDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + ++ +A+ K + D +R Sbjct: 42 FPREMF-------EERGYNVETHGQKSFNGVAILSKLPLEDVRRGLPGDDSDEQARW--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCF---LDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +E V + + I + ++L + D + + LK + Sbjct: 92 --IEATV-VGKQAIRICGLYLPNGNPVALNDDGTPVAGGKYAYKLGWMERLKARAAELMA 148 Query: 201 SLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 +P ++AGD+N + + ++ I F Sbjct: 149 EEMPALMAGDYNIIPQAEDAKRPEAWREDALHRPESRAAFQRIVNLGFTEAFRARTRGPG 208 Query: 246 NANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + ID+F++ A L D ++ SDH Sbjct: 209 HYTFWDYQAGAWNRDDGIRIDHFLLTPQAADLLRDCQI-------DKDIRGREKPSDH 259 >gi|269955565|ref|YP_003325354.1| exodeoxyribonuclease III Xth [Xylanimonas cellulosilytica DSM 15894] gi|269304246|gb|ACZ29796.1| exodeoxyribonuclease III Xth [Xylanimonas cellulosilytica DSM 15894] Length = 279 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 81/305 (26%), Gaps = 53/305 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + + N+N + + + + D++ +QE+ + +AV Sbjct: 2 LTVATANVNGIRAAMRRGMD---------------SWIADRSPDVLLMQEVRAPDAVLDG 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + W + + + + + + AVR +S + G R Sbjct: 47 F-FDGWHVAHQACDIKGRAGVAVASRLPV-HAVRVGLEAYGPRSSEGGCEPEPAVDTG-R 103 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + G + V+ ++ S + + + + Sbjct: 104 WVEADVELPGGGLLTVVSAYIHSGSTWP---VDNPVKMVEKYAYLEKVTARLAELGSGPT 160 Query: 204 PFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNA 247 P ++AGD N + + + + D Sbjct: 161 PTLVAGDLNIAHHNVDIANWKGNLKNAGFLPEERAYLDRWFDELGWTDLGRAHGGEGPGP 220 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY + + ++ D + +R SDH P+ Sbjct: 221 YTWWSWRGQAYVNDKGWRIDYQLANPALAPRALKVEV-------DRAPTYEERWSDHAPL 273 Query: 299 SIDYD 303 YD Sbjct: 274 IATYD 278 >gi|213626805|gb|AAI70146.1| Deoxyribonuclease I [Xenopus laevis] Length = 350 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 90/301 (29%), Gaps = 29/301 (9%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 ++ + C ++ S+NI S LL + + Sbjct: 3 FLVLVAMTACFLQAGFAFKIASFNIQRFSMT---------KVDDPVVLELLIRILSRYE- 52 Query: 67 DIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 I+ ++E+ A+ + + + + LI+ S+ A R+ V+ Sbjct: 53 -IIAIEEVMNADNTAIISLVKELSLATKLNYNVLISDHLGRSSYREKYAYVYREDTVKPT 111 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + + G ++ + + R + + S + +L Sbjct: 112 EWYHFDDGCENCGTDSFIREPFVARFT----SLTTVVKDFALISIHTSPDYAIMEVDALY 167 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + + +I GD+N +Y+ + + + L+ +K+ Sbjct: 168 DAWVDAKQRL------KMENILILGDYNAACSYVASRHWPIIRLRHVEELVWLIGDKEDT 221 Query: 245 CNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISID 301 + D V + ++ ++ Y+ + K +SDH P+ ++ Sbjct: 222 TVSTNTN---CAYDRMVAGGEELQRGIVPDTAKAFNYHVAYDLTYEMAKAVSDHYPVEVE 278 Query: 302 Y 302 Sbjct: 279 L 279 >gi|329120066|ref|ZP_08248736.1| endonuclease/exonuclease/phosphatase [Neisseria bacilliformis ATCC BAA-1200] gi|327463597|gb|EGF09915.1| endonuclease/exonuclease/phosphatase [Neisseria bacilliformis ATCC BAA-1200] Length = 250 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 82/287 (28%), Gaps = 48/287 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + + ++NI+ S + +L +DI+FLQE+ N Sbjct: 3 NPITVSTYNIH----------KGMSPLNRKVQIGDMAAALDSLKSDILFLQEVQGQNLPR 52 Query: 82 KV----FPKNTWCIFYSTE--RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + FP + ++ K H A+ + + +++ + Sbjct: 53 EAKLSGFPAKPQHDIIADYLDYHPSYGKNAVFPHKHHGNAIISRLPILSERNLNIT---- 108 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 +R R + + G + ++ + +Q + +++ Sbjct: 109 -VNRLEKRGVLHCEIRPEGWETPIVCLCAHLNLL-----------ERDRVKQYVAIFEYV 156 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 T P ++AGDFN + N +T+ + + + Sbjct: 157 TAYIPPDAPLILAGDFNDWRHKSPLN--IGRTLGLTEVFLDRRGTLP---KTFPARLPVL 211 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D EIL LSDH P+S Sbjct: 212 SLDRIYTRH-----------LEILDARLHSGEPWLYLSDHLPLSATL 247 >gi|325922607|ref|ZP_08184358.1| Exodeoxyribonuclease III [Xanthomonas gardneri ATCC 19865] gi|325546902|gb|EGD18005.1| Exodeoxyribonuclease III [Xanthomonas gardneri ATCC 19865] Length = 259 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 82/303 (27%), Gaps = 73/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N+L+ L+Q+ D+V +QE Sbjct: 1 MKIASWNVNSLN----------------VRLPHLQQWLGTFAPDVVGIQET--------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ ++ + Q F R Sbjct: 36 -KLEDHKFPDAALAAAGYRSVFCGQKTYNGVAILSRSPALDVQ-----MGIPGFDDVQQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++++++ + +D+ + Y + + +W+ Q+ + Sbjct: 90 VIAATV-----DGVRIVNLYVVNGQDVDTDKYAYK------LRWLAAVHEWLAQELQKYP 138 Query: 204 PFVIAGDFNRKINYLGNNDD-FWKTID--------------PNDSLIRFPKEKDSRCNAN 248 ++ GDFN + +D W L + Sbjct: 139 QLMVLGDFNIAPDARDVHDPSVWNEHHILTSTAERAALEKLLALGLHDAFRLHHDDAEQF 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID ++ ++ D +R SDH P Sbjct: 199 SWWDYRQAGFRRNLGLRIDLTLVSDALRARAVESGI-------DREPRTWERPSDHAPAW 251 Query: 300 IDY 302 + Sbjct: 252 VRL 254 >gi|303229843|ref|ZP_07316620.1| exodeoxyribonuclease III [Veillonella atypica ACS-134-V-Col7a] gi|303231217|ref|ZP_07317955.1| exodeoxyribonuclease III [Veillonella atypica ACS-049-V-Sch6] gi|302514124|gb|EFL56128.1| exodeoxyribonuclease III [Veillonella atypica ACS-049-V-Sch6] gi|302515473|gb|EFL57438.1| exodeoxyribonuclease III [Veillonella atypica ACS-134-V-Col7a] Length = 251 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 76/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + LDADI LQE Sbjct: 1 MKLISWNVNGLRAAVTKGFIDS---------------FNELDADIFCLQETK-LQPHQIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + F+++ + + AV + + + + D R Sbjct: 45 LELPGYEQFWNSAVKKGY----------SGTAVFTRIKPIAVTNGIGIEEHDQEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ +++ + + + + L + Sbjct: 91 -----VITAEYDNFYLVCCYTPNSQRELARLDYRMTWEDAFRAYLLEL--------DKKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + F + Sbjct: 138 PVILCGDLNVAHNEIDLKNPKTNRKNAGFSDEERAKMTELLESGFTDTFRYLYPDAVDEY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ + + + + ++ SDHCP+ Sbjct: 198 SWWSYMGKARDRNVGWRIDYFITSKRLDDKIKEAKIHQQIF-----------GSDHCPVE 246 Query: 300 IDYD 303 +D + Sbjct: 247 LDIE 250 >gi|298482977|ref|ZP_07001159.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. D22] gi|298270949|gb|EFI12528.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. D22] Length = 378 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 41/342 (11%), Positives = 87/342 (25%), Gaps = 71/342 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67 R+VSWNI + SL + + R + + + Sbjct: 43 PFRVVSWNIENQFDTHHDSLKNDHEFLPDAMRHWNYSRYKKKLVDVARVITAIGEWSPPA 102 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 +V L E+ + + + ++ + N I A+ ++ ++L Sbjct: 103 LVGLCEVENDTVLRDLTRRSPLKELSYRYVMTNSPDL---RGIDVALLYQRDLFKLLSSR 159 Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSP-SCSLLS 185 + + R + + + + G + V HL S +Y + +L Sbjct: 160 SISIPPLKQY--RPTRDLLHVSGLLLTGDTLDVFVCHLPSRSGGAKESESYRLYAAHILR 217 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT------------------ 227 + + SL +I GDFN Sbjct: 218 MEVDSI-----MSIRSLPQVIIMGDFNDYPTNQSIQKILEAEAPPVTTNNLASTTGSTNF 272 Query: 228 -----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK-------------- 268 + K K + K +D+ ++ Sbjct: 273 STVAPSSLKLYHLLARKAKSKDFGSYKYRGEWGLLDHLIVSGTLLNQSNHFFTSEEKANV 332 Query: 269 -------FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + + +SDH PI D++ Sbjct: 333 CLLPFLLKDDEKYGDKEPFRTYKGMKYQGGVSDHLPIYADFE 374 >gi|291515956|emb|CBK65166.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301] Length = 327 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 86/309 (27%), Gaps = 44/309 (14%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---YN 78 +RL+ WNI +Y ++ + D D+ E S Sbjct: 34 NNMRLLYWNIQNGMWSGQG-----------DNYDKFVEWVRAYDPDVCVWCEAQSIYKTG 82 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 K+ + + + E + + H R +V+ YP+ + Sbjct: 83 TADKMDVADRYLVGNWGELAARYGHKYWYMGGH-----RDNYPQVITSKYPIENVERIVG 137 Query: 139 RAG----NRRAVELLVEINGKKIWVLDIH-LKSFCFLDSLENTYSPSC----SLLSQQAQ 189 A +E NGK + ++ +H ++ + S + + + Sbjct: 138 SKPDSVVTHGAGWARIEKNGKTVNIVTLHTWPQGYAFEAKDRDASRAENGGDKYRRMEME 197 Query: 190 WLKDWITQKKE--SLVPFVIAGDFNRKINYL---------GNNDDFWKTIDPNDSLIRFP 238 ++ + +++ GDFN + + I + + Sbjct: 198 YICNHTIHSVPGAEKQFWMMMGDFNARSSRDNWFYKYPAGDTRFLVHDYILRHTPYVDVI 257 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----KRLSD 294 K K ID+ Y+ + Y E SD Sbjct: 258 AGKYPGEFKTTT-GGKSRIDFVYCTPPLYERITHADVVTDAYTEPVRDPAKLSNFWHPSD 316 Query: 295 HCPISIDYD 303 H PI +D++ Sbjct: 317 HRPIVVDFN 325 >gi|229521687|ref|ZP_04411105.1| extracellular nuclease-related protein [Vibrio cholerae TM 11079-80] gi|229341281|gb|EEO06285.1| extracellular nuclease-related protein [Vibrio cholerae TM 11079-80] Length = 869 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 48/373 (12%), Positives = 89/373 (23%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R ++ + LDADIV L E Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116 + + S R D I T + Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162 R K V++ Q + ++ + R + ++ G KI V Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVIDTNGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652 Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211 H KS + + L Q + VI GD Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712 Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243 N D I + + K Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDSGAEIKHSYGYLNAVAMKHP 772 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290 + +D+ ++ + ++ + I E + Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 833 RASDHDPAVLELN 845 >gi|260808574|ref|XP_002599082.1| hypothetical protein BRAFLDRAFT_225146 [Branchiostoma floridae] gi|229284358|gb|EEN55094.1| hypothetical protein BRAFLDRAFT_225146 [Branchiostoma floridae] Length = 272 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 74/302 (24%), Gaps = 74/302 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN++ L + Y D DI+ LQE Sbjct: 14 LKIASWNVDGLRGTVKKNG---------------HAYIPQEDPDIICLQETKCTE----- 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + E + + + A+ K + + D R Sbjct: 54 -KDVPKEFTATVEGYHGYWYSPTEKKGYAGTALLSKTKPIKVTYGIGVDEHDDEGR---- 108 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ +++ ++ + + + + L + Sbjct: 109 -----VITAEFDDFYMVTAYVPNAGRGLVRLDYRGTWDEAFTAYLKKL--------DKKK 155 Query: 204 PFVIAGDFNR----------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P V+ GD N + + + T+ + + + Sbjct: 156 PVVLCGDLNVAHNEIDLKNPKGNKNKTPGFTDKEREGFTTLLDEGFKDSYRELYPEETDC 215 Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +DYFV+ L D++ SDHCPI Sbjct: 216 YTFWSYMGGARAKNVGWRLDYFVLSDRLMPQLC-----------DNVIRSEVMGSDHCPI 264 Query: 299 SI 300 + Sbjct: 265 VL 266 >gi|325299447|ref|YP_004259364.1| Endonuclease/exonuclease/phosphatase [Bacteroides salanitronis DSM 18170] gi|324319000|gb|ADY36891.1| Endonuclease/exonuclease/phosphatase [Bacteroides salanitronis DSM 18170] Length = 358 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 79/303 (26%), Gaps = 70/303 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + ++ +++N +S EG + Y + ADIV LQE Sbjct: 99 SPTLKFLTYNTQGISPGEGNGGEN-----------AVLSYLRRCGADIVCLQEFIPGVHA 147 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + I + +A + + + + Sbjct: 148 SA-------EEISQALEDIYPHHASTRIKGGDVLACYSRYPILETEEIAYPSLYN----- 195 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP--------------------- 179 +V +++ + V++ HL+S + Y+ Sbjct: 196 ---GSVLYRIKVGEDTLAVINNHLESNKLDAYDKKVYNEILKSPREANVKAEGKHLLRKL 252 Query: 180 --SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + +L + QA + I + ++ GDFN + I Sbjct: 253 ADAVALRAPQADSVARAIR--ENRADYMLVCGDFNDSPVSYAY-----RVIGEGLDDAFV 305 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+N ID+ + F + D R SDH P Sbjct: 306 AAGAGPGFTYNQNHLY-FRIDHIFVSPA---------FRVLECKVDRSI----RASDHYP 351 Query: 298 ISI 300 + Sbjct: 352 VWC 354 >gi|227114004|ref|ZP_03827660.1| endonuclease/exonuclease/phosphatase family protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 381 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 34/275 (12%), Positives = 86/275 (31%), Gaps = 27/275 (9%) Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 ++ + L+ADI+ E+ + + + + +S +I+ Sbjct: 111 SSQQRKNTGKIITLLNADILCAVEVENMDVLRDFNNQVLGDDKFSQFVMIDSPN--DPRG 168 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 I A R + ++ + A F +R +E+ ++ K+ + + Sbjct: 169 IDVACLTRYRIAQL---RTHIFDAGKRFDPVFSRDCLEVTLDAGLKQ-PIYILCNHFKSQ 224 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLGNNDDFWKTI 228 E QA+ + + + Q + VI GD N + ++ ++ Sbjct: 225 SGQTEEERLRGAEKRRDQAERVAEIVQQTYDLKKDYVVILGDLNEDSSNPWHSLAPLFSL 284 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIP----IDYFVMDQNAYKFLIQESFSEI------ 278 +I + + R + K +DY + ++ +++ Sbjct: 285 SDLHPVIDPERPEKERYTYYFSGGKKGARLNQLDYIFLSAPLHQAVVEWGVERRGIYNID 344 Query: 279 ----------LYNEDDIKSRGKRLSDHCPISIDYD 303 + ++ S SDH + ++ D Sbjct: 345 KIAAKEGAEPVTPLPEVTSWDTAASDHAALWVEVD 379 >gi|153825148|ref|ZP_01977815.1| hypothetical protein A5A_2794 [Vibrio cholerae MZO-2] gi|149741294|gb|EDM55336.1| hypothetical protein A5A_2794 [Vibrio cholerae MZO-2] Length = 869 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 48/373 (12%), Positives = 89/373 (23%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R ++ + LDADIV L E Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116 + + S R D I T + Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162 R K V++ Q + ++ + R + ++ G KI V Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652 Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211 H KS + + L Q + VI GD Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712 Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243 N D I + + K Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDSGAEIKHSYGYLNAVAMKHP 772 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290 + +D+ ++ + ++ + I E + Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 833 RASDHDPAVLELN 845 >gi|325498038|gb|EGC95897.1| hypothetical protein ECD227_2135 [Escherichia fergusonii ECD227] Length = 242 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 75/257 (29%), Gaps = 43/257 (16%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKV----FPKNTWCIFYSTERLIN--HSKRDSN 107 LR + + ADIV LQE+ + V + +P + F + + + + Sbjct: 19 LPELRDAVRTVSADIVCLQEVMGAHEVHPLHVENWPDTSHYEFLADTMWSDFAYGRNAVY 78 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLK 165 + H AV + S A R + + GK I V+ +HL Sbjct: 79 PEGHHGNAVLSRYPIE-----HYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLG 133 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 + Q L +W+ + P ++AGDFN + Sbjct: 134 LR-------------EAHRQAQLAMLAEWVNE-LPDGEPVLVAGDFNDWRQKANHPLKVQ 179 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 +D F + + +D + + Sbjct: 180 AGLDE-----IFTRAHGRPARTFPVQFPLLRLDRIYVKNASAS-----------APTALP 223 Query: 286 KSRGKRLSDHCPISIDY 302 + LSDH P+S + Sbjct: 224 LRTWRHLSDHAPLSAEI 240 >gi|313676472|ref|YP_004054468.1| exodeoxyribonuclease iii [Marivirga tractuosa DSM 4126] gi|312943170|gb|ADR22360.1| exodeoxyribonuclease III [Marivirga tractuosa DSM 4126] Length = 255 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 95/305 (31%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + ++S+N+N + ++ L Q+ + D+ LQE+ + + + Sbjct: 1 MNIISYNVNGIRA---------------AERKGLSQWLEEEKPDVFCLQELKANRSDVDL 45 Query: 84 --FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 F + I++ + +S V + + D + R G Sbjct: 46 SVFENLGYHIYWHSAEKKGYSGVGIFTK-------------VKPNNVEIGCNMDIYDREG 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 ++ + + VL+ ++ S D ++ Q + +I K+ Sbjct: 93 R------VIRADFENFSVLNTYMPSGSSGDPRQD-------FKMQWLSDFRAYIQDLKQE 139 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNA 247 + +I GD+N + +D ND I + + + Sbjct: 140 IPNLLICGDYNICHQAIDIHDPVRNKNSSGFLPEEREWMTDFLNDGFIDSFRHLNKEPDQ 199 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY ++ +N L + + + SDHCPI Sbjct: 200 YSWWSYRSAARERNKGWRIDYHMISENLKNQLKAADILQDVKH-----------SDHCPI 248 Query: 299 SIDYD 303 ++ D Sbjct: 249 KVELD 253 >gi|308186127|ref|YP_003930258.1| hypothetical protein Pvag_0607 [Pantoea vagans C9-1] gi|308056637|gb|ADO08809.1| Uncharacterized protein ybhP [Pantoea vagans C9-1] Length = 253 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 34/290 (11%), Positives = 80/290 (27%), Gaps = 49/290 (16%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + +++++ N + LR+ + AD+VFLQE+ + Sbjct: 5 AQGFSIKVLTINTHKGFAPFNRRF----------ILPELREAVRATSADVVFLQEVMGTH 54 Query: 79 AVAKVFPK-----NTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 A+ + + + T + + + H AV + ++ + Sbjct: 55 AIHSLNHEEWPESPHYEFLADTMWNDFAYGRNAVYPEGHHGNAVLSRFPITDYENRDISV 114 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 A + NR + + + + I + + Q + + Sbjct: 115 AG-----SENRGMLHCQIALPEPHGTLHVICVHLGL-----------KEAHRHAQMKKIC 158 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + + P V+AGDFN F + Sbjct: 159 EMVNS-LPPDAPVVVAGDFNDW-----QRRANAILKQGAGLKEVFSMKTGRPARTFPARF 212 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + + LSDH P++++ Sbjct: 213 PLLRLDRIYVRNA-----------TVSHPWALPRKPWSHLSDHAPLAVEI 251 >gi|118464012|ref|YP_883854.1| exodeoxyribonuclease III [Mycobacterium avium 104] gi|118165299|gb|ABK66196.1| exodeoxyribonuclease III [Mycobacterium avium 104] Length = 272 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 73/305 (23%), Gaps = 64/305 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N S + + D D++ +QE + Sbjct: 1 MRLATWNVN----------------SIRSRLPRVLDWLARTDVDVLAMQETKCADG---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + + S Sbjct: 41 ------QFPTLPFFELGYEVAHVGFNQWNGVAIASRVGLDDVRVGFEGQPSWSGKPEVAA 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + + + +++ + + Y L+D Sbjct: 95 AAEARALAATCAGVRIWSLYVPNGRAVGDPHYAYKLD------WLAALRDSAAGWLREDP 148 Query: 204 P--FVIAGDFNRKINYL----------------GNNDDFWKTIDPNDSLIRFPKEKDSRC 245 +AGD+N F +D + + P Sbjct: 149 AAQIALAGDWNIAPQDDDVWSMEFFAGATHVSEPERRAFNAILDAQFADLVRPFAPGPGV 208 Query: 246 NANKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + R + ID+ + + D + +GK SDH P+ Sbjct: 209 YTYWDYTALRFPKRQGMRIDFILGSPALARR-------VTHAQIDREERKGKGASDHAPV 261 Query: 299 SIDYD 303 +D Sbjct: 262 LVDVS 266 >gi|332671352|ref|YP_004454360.1| endonuclease/exonuclease/phosphatase [Cellulomonas fimi ATCC 484] gi|332340390|gb|AEE46973.1| Endonuclease/exonuclease/phosphatase [Cellulomonas fimi ATCC 484] Length = 668 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 80/288 (27%), Gaps = 54/288 (18%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 VP A+ + +V WN++ T D + + + D D+V LQE Sbjct: 427 VPAAAADDGTLTVVDWNLHY-----------GVSPLTAVDLEAVARTIEEQDPDVVTLQE 475 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + TW RL + D AV ++ +PL Sbjct: 476 VQRGWVFGGGSDMATWL----AHRLGMTVRFAPAADRQFGNAVLARSGLTDVAVHPLPYG 531 Query: 134 KDSFSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + R A+ + +G + V +HL+ + Sbjct: 532 QGPQE----RSALSATLTTADGGTVRVTSVHLQHRESATPTRLAQLDALLA--------- 578 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + P ++AGD N + + D+ + + Sbjct: 579 -----AERVDGPALLAGDLNATPGSPE-----LDLLTGAGWVSAVDAAGDADATTHPSTD 628 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ + + + + LSDH P++ Sbjct: 629 PEQRIDWVLGQRGTFTEATVGT---------------STLSDHLPVTA 661 >gi|229513544|ref|ZP_04403008.1| extracellular nuclease-related protein [Vibrio cholerae TMA 21] gi|229349421|gb|EEO14377.1| extracellular nuclease-related protein [Vibrio cholerae TMA 21] Length = 869 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 50/373 (13%), Positives = 89/373 (23%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R ++ + LDADIV L E Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116 + + S R D I T + Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162 R K V++ Q + ++ + R + ++ G KI V Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652 Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211 H KS + + L Q + VI GD Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712 Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243 N D I + I K Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDSGAEIKHSYGYINAVVVKHP 772 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290 + +D+ ++ + ++ S I E + Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKTKVVDASDWHINGAESTLFDYNDEFKGNLPKYKDQF 832 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 833 RASDHDPAVLELN 845 >gi|325854960|ref|ZP_08171676.1| exodeoxyribonuclease III [Prevotella denticola CRIS 18C-A] gi|325483938|gb|EGC86878.1| exodeoxyribonuclease III [Prevotella denticola CRIS 18C-A] Length = 249 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 39/302 (12%), Positives = 86/302 (28%), Gaps = 77/302 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L G Q K L+AD LQE A Sbjct: 1 MKLISWNVNGLRACVGKDFE---------------QQFKALNADFFCLQETK-MQAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ ++ ++ A+ K+ + + D R Sbjct: 45 ISFPGYASYWN----------YADKKGYSGTAIFTKHKPLDVTYGIGMDEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + + + +D++ + + Sbjct: 91 -----VITLEMDDFYLVTVYTPN-------SQDGLRRLDYRMKWEKDFQDYL-HRLDRKK 137 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P V+ GD N + + +D + + Sbjct: 138 PVVVCGDMNVAHEEIDIKNPKTNRRNAGFTDEEREKMTQLLDSGFIDTFRTLYPEQVTYS 197 Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + R + IDYF++ + L + SDHCP+ + Sbjct: 198 WWSYRFRARERNTGWRIDYFLISERLRDRLEDAKIHTEI-----------MGSDHCPVEV 246 Query: 301 DY 302 D Sbjct: 247 DL 248 >gi|324511832|gb|ADY44920.1| Neutral sphingomyelinase [Ascaris suum] Length = 392 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 43/295 (14%), Positives = 85/295 (28%), Gaps = 35/295 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++ N L + W + + L + + + DI+ LQE+ S ++ Sbjct: 5 LRVITLNCWALPQP-----WPVGSRDRQYRLSKLCEALLSTNYDIISLQEIWSVRDFDRI 59 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS---RA 140 ++ I R V L Y L G Sbjct: 60 ------NSAIKDVYPYSYYFHSGFTGSGVCIFSRHAIVSTLMHRYSLNGFAHHIHRGDWF 113 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 G + + +EI +I HL + + QA L ++ Sbjct: 114 GGKVVGMVQLEIGTYRINFYATHLHA-----EYDRENDLYLPHRLSQAFELSQFVKHTSH 168 Query: 201 SLVPFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 + ++ GDFN + + LG D + + + ++ C +NL Sbjct: 169 AADLTILTGDFNLEPDDLGYRLIVDNANLIDAWLARPNKSGCETGMTCDRPDNCYTARNL 228 Query: 252 RNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +DY + + + SDH + D+ Sbjct: 229 KQPNPAGKRLDYIMYKCG---KSDVDLVMCENRLGRIPGDKQINYSDHLGVYADF 280 >gi|261250441|ref|ZP_05943016.1| extracellular nuclease-related protein [Vibrio orientalis CIP 102891] gi|260939010|gb|EEX94997.1| extracellular nuclease-related protein [Vibrio orientalis CIP 102891] Length = 871 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 49/373 (13%), Positives = 103/373 (27%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G + R + LDADI+ L E Sbjct: 476 GDLRIATFNVLNYFNSPFGGDANPHGNNRGANSFEEFEVQQAKIVNAILRLDADIIGLME 535 Query: 74 MGSYN-----AVAKVFPK---------NTWCIFYSTERLINHSKRDSNND---IHTAIAV 116 + + A+ ++ + + + I + + I T + Sbjct: 536 IENNGFGDSGAIRQLVDQLNAQIEKKKDRYDIVAIDSNGDKVTDENDYIGTDVITTGVIY 595 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEING--KKIWVLDI 162 R K V++ + ++ + R ++ ++ G +KI V Sbjct: 596 RPKVVKLKDSRVIPMPSQQAPEVLDDNGKVIEDGKNYQRDSLAPTFKVKGTKEKITVAIN 655 Query: 163 HLKS--------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL------ 202 HLKS + + A L D +++ K Sbjct: 656 HLKSKGSKCWEDAAPVEQGGQGGQDLDKQGSCENFRVAAAVALGDALSEIKGHKVILGDL 715 Query: 203 ------VPFVIAGDF-------------NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 P ++ D+ N I+ D I + I + Sbjct: 716 NAYGMEDPLLVLTDYSQEKYGKTIKAARNTYIDGQVQFGDEGAVITDSYGYINAVAKAHP 775 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK------------- 290 + +D+ +M + K + + I E + + Sbjct: 776 NSWSYSYNDEVGALDHLLMSPSLEKHFVDATDWHINGGESKLFDYNEEYKGDLPKYNDHF 835 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 836 RSSDHDPAVLELN 848 >gi|239945332|ref|ZP_04697269.1| putative exonuclease [Streptomyces roseosporus NRRL 15998] gi|239991789|ref|ZP_04712453.1| putative exonuclease [Streptomyces roseosporus NRRL 11379] gi|291448794|ref|ZP_06588184.1| exonuclease [Streptomyces roseosporus NRRL 15998] gi|291351741|gb|EFE78645.1| exonuclease [Streptomyces roseosporus NRRL 15998] Length = 259 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 77/303 (25%), Gaps = 68/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++N+N T+ L + ++ D++ +QE Sbjct: 1 MRIATYNVN----------------SITARLPRLLAWLESSGTDVLCIQETKCTAE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + +A+ + + L G + R Sbjct: 41 ------QFPAEALREAGYESAVNATGRWNGVALLSRVGLTDVVTG-LPGGPEYDGVQEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +++ + ++ Y + + L+ + + Sbjct: 94 A-----ISATCGPLRLWSVYVPNGREVEHEHYAYK------LRWLEALRKAVAADAAGSL 142 Query: 204 PFVIAGDFNRKINYLGNNDDFW--------------KTIDPNDSLIRFPKEKDSRCNANK 249 PF + GDFN D + L A Sbjct: 143 PFAVLGDFNVAPTDEDVWDPALFEGATHVTPAERAALAALEAEGLSEVHPRPLKYDRAYT 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID + + D + +GK SDH P+ + Sbjct: 203 FWDYRELRFPKNKGMRIDLTFGNAPFTAAVKDSYV-------DREERKGKGASDHAPVVV 255 Query: 301 DYD 303 D D Sbjct: 256 DLD 258 >gi|158423021|ref|YP_001524313.1| exodeoxyribonuclease III protein [Azorhizobium caulinodans ORS 571] gi|158329910|dbj|BAF87395.1| exodeoxyribonuclease III protein [Azorhizobium caulinodans ORS 571] Length = 270 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 33/303 (10%), Positives = 75/303 (24%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++N+N ++ L + + D+ LQE Sbjct: 1 MRIATFNVNGVNG----------------RLPPLLDWLRQSKPDVACLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ + ++ L G D +R Sbjct: 35 LKAPHERFPAAELEQAGYGAVWLGQKAWNGVAILARGEMPVETRRGLPGDPD---DIQSR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + ++ + + Y + + L+++ Q + + Sbjct: 92 YIEAAV-----GGVLIGCLYAPNGNPAPGAKFDYK------LRWLERLRNYSAQMLDLDL 140 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGDFN + + + + Sbjct: 141 PMVLAGDFNIMPEERDVYAPERWRDDALFRPEVRAAFADLRDDGWVDALRHLHPDARLYT 200 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ L+ D SDH P I Sbjct: 201 FWKYLRNAFARDAGLRIDHLLLSPALAPRLVSAGV-------DRAVRGRDHASDHAPAWI 253 Query: 301 DYD 303 D Sbjct: 254 TLD 256 >gi|159490968|ref|XP_001703445.1| hypothetical protein CHLREDRAFT_143864 [Chlamydomonas reinhardtii] gi|158280369|gb|EDP06127.1| predicted protein [Chlamydomonas reinhardtii] Length = 437 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 31/325 (9%), Positives = 84/325 (25%), Gaps = 65/325 (20%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE- 73 P + + + ++SWN+ L + A++V LQE Sbjct: 133 PAPPAGSTPLNILSWNVAGLRAL------------LKKTPDAVSSLVSREAAEVVCLQEH 180 Query: 74 ---MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 V ++ W ++ + ++ ++V ++ + Sbjct: 181 KLQANHQKEVEELLGLQGWHHAWAF---------STAKLGYSGVSVHTRSPPLSVVVGLG 231 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G + +V + + ++++++++ + + + Sbjct: 232 HGGPGAADPDPEHEGEGRVVTVELEGLFLVNVYVPNSGEG------LKRLDYRVGRWDGA 285 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSL 234 ++ + P V+ GD N + F + + L Sbjct: 286 FAAFLQGLQARGKPVVVTGDLNCAHKEIDIHAPKTNLKSAGFTPEERESFGRLLLAEAGL 345 Query: 235 IRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYK---------FLIQESFS 276 + A + +DYF+ ++ + Sbjct: 346 ADTFRRLYPDTVAYTYFTRRFNCREKNKGWRLDYFLTSESMMPPELQQGGEGAAAAAGPA 405 Query: 277 EILYNEDDIKSRGKRLSDHCPISID 301 D + SDH P+ + Sbjct: 406 SAWAVYDTWIMQDVYGSDHLPLGLT 430 >gi|308806584|ref|XP_003080603.1| Endonuclease/exonuclease/phosphatase (ISS) [Ostreococcus tauri] gi|116059064|emb|CAL54771.1| Endonuclease/exonuclease/phosphatase (ISS) [Ostreococcus tauri] Length = 546 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 97/303 (32%), Gaps = 36/303 (11%) Query: 17 TASVAQKVRLVSWNINTLSEQ----EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 T + + ++R+ ++N L + ++ + + +DAD+V L Sbjct: 38 TNAGSARLRVGAFNARWLFDGVSDVSASPYANGEANAAREHGRMVNEVIRAIDADVVVLT 97 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E + + + +++ + V + R + Y Sbjct: 98 ETETCETLDWAREGTPNVARALVKGTDTATQQQIGILSKISF-VEEPWRREDRADYDAAT 156 Query: 133 AKDSFSRAGNRRA---VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + +S + N ++ + + ++ HLK+ S SC+ QA+ Sbjct: 157 SACGYSGSKNSGVSKHAVARFKVGARTVALIGAHLKANPT-------QSSSCAQREAQAE 209 Query: 190 WLKDWITQKKESLVPFVIAGDFNR------KINYLGNNDDFWKTIDP------NDSLIRF 237 L+ ++ E+ ++AGD N + + ++ Sbjct: 210 VLRSIARERFEAGDAVIVAGDLNDYSDLHVDAGNNSPTSRVLRMLRDLNNDGVDELQEVG 269 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 S ++ +K +DY ++ ++ + + +++ +SDH P Sbjct: 270 ELVAVSDRYTWRSGSSKAKLDYILVSRSDFDLVSASIQHDLV---------NASVSDHFP 320 Query: 298 ISI 300 + Sbjct: 321 LLA 323 >gi|71892211|ref|YP_277944.1| exonuclease III [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796317|gb|AAZ41068.1| exonuclease III [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 268 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 31/310 (10%), Positives = 71/310 (22%), Gaps = 73/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L L D++ LQE ++ Sbjct: 1 MKFVSFNINGL----------------RARMHQLNAIIFQLKPDVIGLQETRVHDDF--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ + + + Sbjct: 42 -------FPVKEILQHGYHVYYYGQKKYHGVALFLRQTPLTVTR-----GLTDDDNLSQK 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + +++ F + + ++++ S Sbjct: 90 RIIMADIMTPIGTLTIIN-----GYFPQGENKNHPEKFMYKKNFYKSFQNYVEHTYHSHS 144 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 +I GD N L + + + + Sbjct: 145 LLLIMGDMNISPTDFDIGIGEKNKKRWIASGRCSFLPEERTWINRLMSWGLVDIYRNMHP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + ID + + + R +R S Sbjct: 205 QNDERYSWFSYRSHGFYKNNGLRIDLILATRPLANRCKNS-------DISYDIRRMQRPS 257 Query: 294 DHCPISIDYD 303 DH P+ +D+D Sbjct: 258 DHAPVWVDFD 267 >gi|288802726|ref|ZP_06408164.1| endonuclease/Exonuclease/phosphatase [Prevotella melaninogenica D18] gi|288334876|gb|EFC73313.1| endonuclease/Exonuclease/phosphatase [Prevotella melaninogenica D18] Length = 324 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 84/317 (26%), Gaps = 46/317 (14%) Query: 20 VAQKVRLVSWNINTLSE-------QEGVSLWKNSVKRTT----SDYTLLRQYAKNLD--- 65 ++ +V N L + + L + T + Q Sbjct: 18 AQTRLTIVELNTENLFDTRHDTLKNDYEFLPDSPRHWTRTKYWQKLNRIGQTIIACGEDS 77 Query: 66 -----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 DIV L E+ + + + + ++ + + SN+ +A+ Sbjct: 78 SGWTLPDIVGLCEVENDSVLFDLTRRS-----LLRKARYEYVMTASNDARGIDVALLYSP 132 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSP 179 + R + + EI +G + V +H S + P Sbjct: 133 FSFRLIKADTIRVIPMKEMRPTRDILHVEGEIESGDTLHVFLLHAPSRMGGELY---SRP 189 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + +Q + D + ++ ++ GDFN + + + + Sbjct: 190 FRKHVMEQLCNVIDSLRRQYVEPK-LLVMGDFNDYADSPSLQLAYEHGLINVSAEAHGCN 248 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS--------------EILYNEDDI 285 + +D ++ +N ++I + + Sbjct: 249 GAKG---TYRYHGAWGSLDQILVSKNLRSWMIDCRINDARFLLEEDTKYGGVKPRRNYNG 305 Query: 286 KSRGKRLSDHCPISIDY 302 SDH P+ + Sbjct: 306 MRFNNGFSDHLPLVLRL 322 >gi|228924315|ref|ZP_04087565.1| hypothetical protein bthur0011_52690 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835341|gb|EEM80732.1| hypothetical protein bthur0011_52690 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 344 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 96/338 (28%), Gaps = 56/338 (16%) Query: 23 KVRLVSWNINTLSEQE---GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 ++R ++N+ +E K S +++ + D++ QE+ S Sbjct: 2 QIRCGTFNLYQFAEPPFKWYEPGNKYSDAEWLMKKEWIKEQILKMKCDVIGFQEVFSSAI 61 Query: 80 VAKVFPKNTW-CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF- 137 + + + + + + AIA + + V P ++ Sbjct: 62 LKSLVEELGFIHFETVETPVTDIDNPLVFIKPVVAIASKYPIISVNPVKVPDSIMEEIPV 121 Query: 138 --SRAGNRRAVELLVEING-KKIWVLDIHLKSFCF---------LDSLENTYSPSCSLLS 185 +R ++ + I+G I HLKS D+L+N + S Sbjct: 122 NADFKFSRIPIKATIHIDGSGDIIFYVSHLKSKNPAVRDLHLNPDDALDNKILATLRARS 181 Query: 186 Q-----------QAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKT----- 227 +A L I++ VP ++ GD N + + + Sbjct: 182 IGHIISLLQRGAEAAVLYHEISETLHTHKEVPVILLGDLNDDEHSIPIEALTNRERLLKI 241 Query: 228 ----IDPNDSLIRFPKEKDSRCN------------ANKNLRNKIPIDYFVMDQNAYKFLI 271 ID ++ I + + + + + DY + Sbjct: 242 NGKPIDDDEQKIVYNYKLYDAFDLAPNQSGQKRLPTHYYKKLGNVFDYIFVSNVLNGKNE 301 Query: 272 QESFSEILYNEDDIK-----SRGKRLSDHCPISIDYDF 304 Q Y D K SDH + +F Sbjct: 302 QHLGRVSAYKVLDHHLKCDDIENKTQSDHAQVVATIEF 339 >gi|115522424|ref|YP_779335.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris BisA53] gi|115516371|gb|ABJ04355.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris BisA53] Length = 270 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 32/306 (10%), Positives = 68/306 (22%), Gaps = 65/306 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 L +WNIN L+ + + D++ LQE Sbjct: 3 FTLTTWNIN----------------SVRLRIDLVAKLLEAEQPDVLCLQETKCP---DDA 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + +AV K DS Sbjct: 44 FPLKRFKQL------GYEHVALNGQKGYHGVAVVSKIPFAETHIRSFCDNLDSRH----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + ++ + D + +P S +K + Sbjct: 93 --ISVSFAAEHTQAPLVLHNFYVPAGGDIPDPELNPKFSHKLSFLDEMKACEPLHPQGEA 150 Query: 204 PFVIAGDFNRKINYLGNN----------------DDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N + D + + Sbjct: 151 RHILVGDLNVAPHEHDVWSHKQLLKVVSHTPIECDKLLAAQQYGNWIDVARDRIPLDQKV 210 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + +N +R SDH P Sbjct: 211 YTWWSYRAADWTVGDRGRRLDHIWVSKALQS-------HVQDFNILRDARGWERPSDHVP 263 Query: 298 ISIDYD 303 ++ ++ Sbjct: 264 VTAVFE 269 >gi|70990110|ref|XP_749904.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus fumigatus Af293] gi|66847536|gb|EAL87866.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus fumigatus Af293] Length = 439 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 99/313 (31%), Gaps = 34/313 (10%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +R + L L +P A+ A + +++ N+ L + + + + Sbjct: 1 MRSFPLVLAA-GIPALAATAGEFNILALNVAGLPPILNGNDVPGDKSDNSR---QIGRKF 56 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 D++ +QE +Y+A + R + ++T + Sbjct: 57 AEYGYDVIHVQEDFNYHA-------YIYETDNHPYRTPTSGGAGIGSGLNT--LSNFEFT 107 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPS 180 ++ + + + + V + G + ++H + D Sbjct: 108 NFVRTKWATCSNAEGADCLTPKGFTSMRVRVEEGVYVDFYNLHADAGSKDDD-------- 159 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFP 238 S Q L D+I + ++ GD N + G+N ++T + N + Sbjct: 160 VKARSANLQQLADYIK-VNSAGNAVLVFGDTNARYTRTGDNIRVFQTQNGMVNPWVELIL 218 Query: 239 KEKDSRCNAN-------KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + +N + +D + L ++ + + +G Sbjct: 219 QGAAPAEGSNALLCQNPSTTSDCETVDKIFYRGSRAVDLRAVFWN--YESNKFLSDKGTI 276 Query: 292 LSDHCPISIDYDF 304 LSDH PI+ ++ + Sbjct: 277 LSDHNPITTNFTW 289 >gi|260663817|ref|ZP_05864702.1| exodeoxyribonuclease III [Lactobacillus fermentum 28-3-CHN] gi|260551578|gb|EEX24765.1| exodeoxyribonuclease III [Lactobacillus fermentum 28-3-CHN] Length = 279 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 85/305 (27%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R +SWNI++++ + + R + + K D++ +QE + Sbjct: 1 MRFISWNIDSINAALTGTSARAEETR------AVLEKIKAAAPDVIAIQETKLSKSGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ S + + K + +YP +GA + G Sbjct: 55 KHQGVLAELFAGYTVVWRSSVEPARKGYAGTMYLYKESLTPKVTYPTIGAPEPMDEEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + K ++ +++ + + L + Sbjct: 114 -----IITLEFKNFYLTEVYTPNSGTGLKRLAERQEWDDRYREYLTEL--------DRQK 160 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + +GDFN + + + F A Sbjct: 161 PVIASGDFNVAHEEIDLAHPANNHHSAGFTDEEREKFTALLAAGFTDSFRSLHPDETGAY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY+++ ++ + + DH PI Sbjct: 221 SWWAQRAVTSKVNNSGWRIDYWLVSDRLADQVVSSTMIDSGERR-----------DHAPI 269 Query: 299 SIDYD 303 +D + Sbjct: 270 QLDIN 274 >gi|254724480|ref|ZP_05186264.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A1055] Length = 352 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 109/327 (33%), Gaps = 70/327 (21%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T ++ + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMG----------SYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAI 114 LQE+ + + K P + + + N + Sbjct: 110 LQEVDIKSLRSFDVNGHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYA-----EAGL 164 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLD 171 + K + + L G + R + R VE + +N GK + ++++HL + Sbjct: 165 STFSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHSIPVNNGKHVRLVNLHLSA----- 219 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 Y + QQ ++LK+++ + ++ ++ GD N+ ++ + +D + P Sbjct: 220 -----YDEGGKIRKQQVEFLKEYMNKHYKNGDYVIMGGDRNQLVSDVQLSDPKFVKERPE 274 Query: 232 DSLIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESF 275 + D + ID F++ N ++ Sbjct: 275 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQG 332 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + SDH P+S + Sbjct: 333 KDLKFEN----------SDHNPVSAVF 349 >gi|226311672|ref|YP_002771566.1| hypothetical protein BBR47_20850 [Brevibacillus brevis NBRC 100599] gi|226094620|dbj|BAH43062.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 226 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 76/283 (26%), Gaps = 71/283 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----A 79 +R+VS+NI+ + + K+L DI+ LQE+ Sbjct: 1 MRVVSYNIH-----------SGRDLWWRNRLNEMTLTLKDLQPDIIGLQEVHQNGKYGYQ 49 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + + + + +S S D + + K ++ L R Sbjct: 50 ASYIADQLQYHLAFSP--------SISIGDGYYGNTLLSKYALENVEAIVLPA------R 95 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + + G+ I + H Q Q + I Q Sbjct: 96 KEQRTLLYASFQGFGRTITLCVTHCSLNQVS-------------RLAQLQLMSTLIQQHA 142 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 ++ P ++ GDFN + + + + +DY Sbjct: 143 KA--PLLLMGDFNASNVSFTPHLMDCALVSGQEKKPTL-------------PAFRRRLDY 187 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +N + + SDH P+ D Sbjct: 188 IFAS--------------HHWNIEHYELLPVNWSDHVPVIADL 216 >gi|149280306|ref|ZP_01886428.1| endonuclease/exonuclease/phosphatase family protein [Pedobacter sp. BAL39] gi|149228995|gb|EDM34392.1| endonuclease/exonuclease/phosphatase family protein [Pedobacter sp. BAL39] Length = 370 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 92/307 (29%), Gaps = 60/307 (19%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + + VR++++N++ EG + + ++ + DI+ QE + Sbjct: 99 SKADSSVVRMMTYNVHGFKPHEGQEF--------ERVKHQMLKLIEDQNPDIIGFQEYYT 150 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + I + S + + +A+ K V + P Sbjct: 151 RRRGTFDITDSLKTILKTPYYYFVSSSENDY--EASGLAIFSKYPIVNKGVIPFGNNHIG 208 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT-------------------- 176 ++ + VE++ KK+ V ++HL+S F Sbjct: 209 N------GSIFIDVEVHQKKLRVYNVHLQSISFDKQDYTYLDKVKKSMDPDLQPSKRIAG 262 Query: 177 -YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 + S Q +K + +P++IAGDFN + S Sbjct: 263 MLKNAFMKRSMQVDLMKAHMGNCS---IPYLIAGDFNDTPASY----AATQMTKSLKSTF 315 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 R + K IDY + ++ + +LSDH Sbjct: 316 REKGSGFGQTYNGKFPNF--QIDYIAVTKDIEVL--------------NHLVIPAKLSDH 359 Query: 296 CPISIDY 302 P+ D Sbjct: 360 FPVRSDL 366 >gi|261362111|gb|ACX71490.1| sphingomyelinase [Bacillus weihenstephanensis] Length = 242 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 83/217 (38%), Gaps = 21/217 (9%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 30 STNQNDTLKVMTHNVYMLSTN----LYPNWGQNERADLIGAADYIK--NQDVVILNEVFD 83 Query: 77 YNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 +A ++ T E S+ +A+ K V + Sbjct: 84 NSASNRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKIQ 143 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 Y + N+ V V+ N + + V+ HL++ D++ SP+ S+ ++Q Sbjct: 144 Y-VFEKGCGPDNLSNKGFVYTKVKKNDRFVHVIGTHLQA---EDNMCGQTSPA-SVRTKQ 198 Query: 188 AQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDD 223 Q ++++I + + +I GD N NN D Sbjct: 199 LQEIQEFIKNKNIPNNEYVLIGGDMNVNKINAENNSD 235 >gi|6647483|sp|O42446|DNAS1_OREMO RecName: Full=Deoxyribonuclease-1; AltName: Full=Deoxyribonuclease I; Short=DNase I; Flags: Precursor Length = 284 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 34/278 (12%), Positives = 87/278 (31%), Gaps = 28/278 (10%) Query: 29 WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-GSYNAVAKVFPKN 87 +NI + ++ + ++ + K D++ +QE+ S + + Sbjct: 32 FNIKSFG---------DTKASNATLMNIITKIVKRY--DVILIQEVRDSDLSATQTLMNY 80 Query: 88 TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE 147 + +++ S R+ V V++ G +++ +R Sbjct: 81 VNKDSPQYKYIVSEPLGASTYKERYLFLYREALVSVVKSYTYDDGPEETGQDTFSREPFV 140 Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207 ++ + + + ++ + +L +A+W + V+ Sbjct: 141 VMFSSKNTAVRDFTLIPQHTSPDLAVRELNALYDVVLDVRARW----------NTNDIVL 190 Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 GDFN +Y+ + I + + + + D V+ + Sbjct: 191 LGDFNAGCSYVSGSAWQQIRIFTDKTFHWLITDAADTTVSQTVCPY----DRIVVTTDMM 246 Query: 268 KFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYD 303 + ++Q S Y D + L SDH P+ + Sbjct: 247 RGVVQNSAKVYNYMTDLNLKQDLALAVSDHFPVEVKLS 284 >gi|150388422|ref|YP_001318471.1| exodeoxyribonuclease III Xth [Alkaliphilus metalliredigens QYMF] gi|149948284|gb|ABR46812.1| exodeoxyribonuclease III Xth [Alkaliphilus metalliredigens QYMF] Length = 251 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 79/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N + Y +DADI +QE Sbjct: 1 MKLVSWNVNGIRACVKKGF---------------LDYFNEVDADIFCIQESKLQEG-QIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ AV K + + + R Sbjct: 45 LDLEGYEQYWN----------YAVKKGYSGTAVFTKEKPISVKYGVGEEEDEEEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++++++ + + + L Sbjct: 91 -----VLTLEFDQFYLVNVYTPNSKRGLERLDGRMIWEDEFRAHLKELDAI--------K 137 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + + F A Sbjct: 138 PVILCGDLNVAHEEIDLKNPKSNKKSAGFTNEEREKMTELLTSGFIDSFRYFYPDLEGAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYFV+ + L + + SDHCP+ Sbjct: 198 SWWSYMGKARERNAGWRIDYFVVSERLKNQLKEAAIH-----------PQIMGSDHCPVV 246 Query: 300 IDYD 303 ++ D Sbjct: 247 LELD 250 >gi|126336177|ref|XP_001368612.1| PREDICTED: similar to DNase1-Like III protein [Monodelphis domestica] Length = 316 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 37/288 (12%), Positives = 85/288 (29%), Gaps = 31/288 (10%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--- 78 +++ S+N+ + + + + ++ + K DI+ L E+ Sbjct: 20 HSLKICSFNVRSFGA---------AKRDNSQVMDVIVKIIKRC--DIMLLMEIKDSRNII 68 Query: 79 --AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + K+ + + +I+ + A RK V V ++SY ++ Sbjct: 69 CPTLIKMLNGKSRRGTKDYDYIISSRLGRNAYKEQYAFLYRKNMVSV-KKSYHYPDTQNG 127 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 A +R + + I S+ L + W Sbjct: 128 DEDAFSREPFVVWFYSPQTAVTDFVIIPLHTTPETSV----REIDELFDVYMDVKRQW-- 181 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 F+ GDFN +Y+ + + + + + Sbjct: 182 ----KPENFIFMGDFNAGCSYVPKKSWKEIRLRMDPKFVWLIGDNEDTTVKGTTKCAYDR 237 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 I + Q ++ +S S + + + + L SDH P+ + Sbjct: 238 I--VLQGQKINSSVVPDSASIFDFQKAYRMTEEEALGISDHFPVEFEL 283 >gi|114765781|ref|ZP_01444876.1| hypothetical protein 1100011001350_R2601_23720 [Pelagibaca bermudensis HTCC2601] gi|114541888|gb|EAU44924.1| hypothetical protein R2601_23720 [Roseovarius sp. HTCC2601] Length = 306 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 45/298 (15%), Positives = 90/298 (30%), Gaps = 38/298 (12%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 +R+ + N++ + + G + S L + L+AD++ QEM Sbjct: 34 ALPPPPEDALRIATLNVHYI-DLRGQGEGRWSRAGWERRKPALGAAVEALEADVIAFQEM 92 Query: 75 G-------SYNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQ 126 + +A+ + + + + + + T Sbjct: 93 ESFRGGNADTDNLARRYLLDRLSGYEAAAIGDWRTFPSTQPIFYRTGKLELVDQGWFFFS 152 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 P + +F + A G V+++HL+ S S Sbjct: 153 DTPDVIYSRTFDGSWPAFASWAAFRQRGGGDVFRVMNVHLEY------------RSASNR 200 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A+ + D + +S P V+AGDFN + + RFPK + Sbjct: 201 RLSAELIADRLRPVIDSGTPVVLAGDFNALAGWEVMESLEAAGL-------RFPKVPGAT 253 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ++ L ID+ + I+ G +DH P+ +D Sbjct: 254 YHLDRGLHLLPAIDHIGHSPGLRG--------VGGPHVPQIRVDGVWPADHHPVVLDL 303 >gi|285016920|ref|YP_003374631.1| exodeoxyribonuclease III protein [Xanthomonas albilineans GPE PC73] gi|283472138|emb|CBA14645.1| probable exodeoxyribonuclease III protein [Xanthomonas albilineans] Length = 259 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 84/305 (27%), Gaps = 75/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N+L+ L+Q+ D+V +QE Sbjct: 1 MKIASWNVNSLN----------------VRLPHLQQWLDTFAPDVVGIQET--------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ + Q + Sbjct: 36 -KLEDHKFPDAALAEAGYRSVFAGQKTYNGVAILSRTPLSDVQ------IGVPGLEDEQK 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 RA+ V + ++++++ + + S + Y + + + W+ + + Sbjct: 89 RAIAATV----GDLRIVNLYVVNGQDVGSDKYAYK------LRWLEAVHAWLAVELQRYP 138 Query: 204 PFVIAGDFNRKINYLGNNDDF----------------WKTIDPNDSLIRFPKEKDSRCNA 247 V+ GDFN + +D + + F + + Sbjct: 139 RLVVLGDFNIAPDSRDVHDPLVWNDDHILTSTAERNALRKLFDLGLHDGF-RLHHADGGI 197 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID ++ + + D +R SDH P Sbjct: 198 FSWWDYRQAGFRRDLGLRIDLTLVSETLKEHTRGAGI-------DRTPRTWERPSDHAPA 250 Query: 299 SIDYD 303 I + Sbjct: 251 WIALE 255 >gi|262401910|ref|ZP_06078475.1| extracellular nuclease-related protein [Vibrio sp. RC586] gi|262351882|gb|EEZ01013.1| extracellular nuclease-related protein [Vibrio sp. RC586] Length = 870 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 49/373 (13%), Positives = 88/373 (23%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R + LDADIV L E Sbjct: 471 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANSLAEFEVQQAKIVNAIVRLDADIVGLME 530 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116 + + S R D I T + Sbjct: 531 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 590 Query: 117 RKKNVRVLQQSYPLLGAKD------------SFSRAGNRRAVELLVEINGK--KIWVLDI 162 R K V++ Q + ++ + R + ++ G KI V Sbjct: 591 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVVEDGKNYQRDTLAPTFKVKGGNEKITVAVN 650 Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211 HLKS + + L Q + VI GD Sbjct: 651 HLKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 710 Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243 N D I + + K Sbjct: 711 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYLAGVEQFGDAGAEIKHSYGYLNAVAIKHP 770 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290 + +D+ ++ + ++ + I E + Sbjct: 771 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 830 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 831 RASDHDPAVLELN 843 >gi|261362088|gb|ACX71476.1| sphingomyelinase [Bacillus cereus] Length = 243 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 78/218 (35%), Gaps = 21/218 (9%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDD 223 Q + ++D+I + + GD N K NN D Sbjct: 198 QLKEIQDFIKNKNIPXDEYVLFGGDMNVKKVNAENNSD 235 >gi|108758427|ref|YP_630443.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] gi|108462307|gb|ABF87492.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] Length = 325 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 79/307 (25%), Gaps = 62/307 (20%) Query: 7 LALVFFL---VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 L L + L S + V ++++N+ + D + Sbjct: 70 LVLTWVLSLQASAAPSSPKPVTVMTYNVLYSAP--------------EEDVQKSLDVIEK 115 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 DI+ L+E+ A+ F K F R + + + + Sbjct: 116 EAPDILCLRELTPR--FARAFRKRLGKQF--------PHVRLVPRKGTWGVGIASRYRLL 165 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT----YSP 179 + +P + A+E + + + V +HL + + Sbjct: 166 RTEHFPQTPHRM--------PALEADIRLGEHWVKVACVHLMAPGARHQRADDLLTSMEK 217 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + L +QA+ L + + P ++ GD N + P Sbjct: 218 NAVLRHRQAEALVRRYARWRG---PVLVLGDMNEGRSGKAMKAFASAGFQ---HACDGPD 271 Query: 240 EKDSRCNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 ID+ + + L + SDH Sbjct: 272 AACGATWPGTASVLPSVVEIDHVL-----GRELRLSGAKVLRA----------GGSDHDA 316 Query: 298 ISIDYDF 304 + DF Sbjct: 317 VRATLDF 323 >gi|301167386|emb|CBW26968.1| conserved hypothetical protein [Bacteriovorax marinus SJ] Length = 330 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 46/318 (14%), Positives = 105/318 (33%), Gaps = 38/318 (11%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTS---DYTLLRQYAKNLDADIVFLQEMGSYNA 79 + S+N+ L ++ + L + ++D+DI FL E+G ++ Sbjct: 8 DFSICSFNVENLFLPPYSDEASYTLYKYEKSKDKVERLAKAILDIDSDIYFLCEVGGEDS 67 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRD---------------SNNDIHTAIAVRKKNVRVL 124 + + ++ + N + + + Sbjct: 68 LKNFVSEYLNDNYHYSLIPGNSERGIELAYLVKKGSPFSFKHFTHKRRPLNFNYPHEEKE 127 Query: 125 QQSYPLLGAKDSF-SRAGNRRAVELLVEINGKK---IWVLDIHLKSFCFLDSLENTYSPS 180 + +G K + S +R EL + + + + +L +HLKS D ++ Sbjct: 128 NKYQMSMGKKRVYKSHLPSRDIAELRIFKDDETKPFLILLGVHLKSQLDKDGIDFGGKLR 187 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---RKINYLGNNDDFWKTIDPNDSLIRF 237 + +Q + + ++ + VP ++ GDFN K ++T D D L Sbjct: 188 RAAEFKQLIETYNVLNKRYHNKVPILLLGDFNGKACKEETDIEFKTLYETTDLEDVLEVI 247 Query: 238 PKEKDSRCNANKNL----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-- 291 + K++R + + +DY + ++ + + + Y ++ + Sbjct: 248 EEPKEARISIHIFDKQGVDQGHQLDYIFIPKSLHSQINAKLSGLYNYKNEEGAPYPRPTS 307 Query: 292 -------LSDHCPISIDY 302 SDH PI Sbjct: 308 LYERYQLPSDHFPIVCTI 325 >gi|218262794|ref|ZP_03477152.1| hypothetical protein PRABACTJOHN_02832 [Parabacteroides johnsonii DSM 18315] gi|218223126|gb|EEC95776.1| hypothetical protein PRABACTJOHN_02832 [Parabacteroides johnsonii DSM 18315] Length = 279 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 78/313 (24%), Gaps = 66/313 (21%) Query: 1 MIRKYVLALVFFLVPC---------TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT 51 M + LA ++ + +R++S+NI + ++ Sbjct: 1 MKQAVWLAAALMMLLPLGKVYSKERSERENNTLRIMSYNIRNGRGMDDMT---------- 50 Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 D+ + + D+V +QE+ S + + I ++ + Sbjct: 51 -DFRRTAEVINKVCPDVVAVQELDSVTGRSGGKDVLREIAGLTLMHHI-YAPAIDYDGGK 108 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 I + K + + L G R R + + E C Sbjct: 109 YGIGMLSKEKPLGYRYLSLPG------REEARALLVVEFE-----------KYIYCCTHL 151 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 SL + QQ + PF IAGD N + Sbjct: 152 SLTEEDRMLSLPVIQQVAA---------SANKPFFIAGDMNAHPDSEFIRQLK------- 195 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 F D + +DY + + Sbjct: 196 ---NDFVILTDMEKPTFPADKPDETLDYI---------AAYAKDTVAFTRISSLVWEEPA 243 Query: 292 LSDHCPISIDYDF 304 SDH PI D F Sbjct: 244 ASDHRPILTDIIF 256 >gi|145296587|ref|YP_001139408.1| hypothetical protein cgR_2495 [Corynebacterium glutamicum R] gi|140846507|dbj|BAF55506.1| hypothetical protein [Corynebacterium glutamicum R] Length = 928 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 99/342 (28%), Gaps = 71/342 (20%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRT----------------------TSDYTLLR 58 A + + S+N+ G S R + + Sbjct: 486 AGEFHIASFNVLNYFTSLGEDEPGCSAYRDINNTPVTANNCNVRGAYTEEALEDQQSKIV 545 Query: 59 QYAKNLDADIVFLQEMGSYN------------------AVAKVFPKNTWCIFYSTERLIN 100 + LD D++ L+E+ + A+ + + W S E+L Sbjct: 546 EAINRLDVDVLGLEEIENTATVTGDVSRRDDALNTLVAALNEAVGSDRWAAVESPEQLGT 605 Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 I A + V+ + +S A + + + + K + Sbjct: 606 DEDY-----IRVAFIYDQTTVKPVGESRIFDDAAFTGTARQPLAQEFQPLNDSEKSFVGV 660 Query: 161 DIHLKSFCFLDSLENT----YSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKI 215 H KS + + + ++ QAQ L D + + + + P I GD N Sbjct: 661 VNHFKSKGSVTRGDADTGDGQGNNANVRVAQAQALIDHLENQDDWASKPIFILGDTNSYA 720 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 T+ + + + +D+ + ++ A K ++ Sbjct: 721 KET-----AMTTLYGAGYTNIATEFDAG--YSYQFSGRIGTLDHALGNEAAMKHVVDAEV 773 Query: 276 SEILYNEDDIKSRGKRL--------------SDHCPISIDYD 303 +I +E +RL SDH PI + ++ Sbjct: 774 WDINADEAIAFEYSRRLNNTSDVFENNVFRSSDHDPIKVGFN 815 >gi|57157723|dbj|BAD83830.1| hypothetical protein [Corynebacterium glutamicum] Length = 934 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 99/342 (28%), Gaps = 71/342 (20%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRT----------------------TSDYTLLR 58 A + + S+N+ G S R + + Sbjct: 486 AGEFHIASFNVLNYFTSLGEDEPGCSAYRDINNTPVTANNCNVRGAYTEAALEDQQSKIV 545 Query: 59 QYAKNLDADIVFLQEMGSYN------------------AVAKVFPKNTWCIFYSTERLIN 100 + LD D++ L+E+ + A+ + + W S E+L Sbjct: 546 EAINRLDVDVLGLEEIENTATVTGDVSRRDDALNTLVAALNEAVGSDRWAAVESPEQLGT 605 Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 I A + V+ + +S A + + + + K + Sbjct: 606 DEDY-----IRVAFIYDQTTVKPVGESRIFDDAAFTGTARQPLAQEFQPLNDSEKSFVGV 660 Query: 161 DIHLKSFCFLDSLENT----YSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKI 215 H KS + + + ++ QAQ L D + + + + P I GD N Sbjct: 661 VNHFKSKGSVTRGDADTGDGQGNNANVRVAQAQALIDHLENQDDWASKPIFILGDTNSYA 720 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 T+ + + + +D+ + ++ A K ++ Sbjct: 721 KET-----AMTTLYGAGYTNIATEFDAG--YSYQFSGRIGTLDHALGNEAAMKHVVDAEV 773 Query: 276 SEILYNEDDIKSRGKRL--------------SDHCPISIDYD 303 +I +E +RL SDH PI + ++ Sbjct: 774 WDINADEAIAFEYSRRLNNTSDVFENNVFRSSDHDPIKVGFN 815 >gi|297824099|ref|XP_002879932.1| apurinic endonuclease-redox protein [Arabidopsis lyrata subsp. lyrata] gi|297325771|gb|EFH56191.1| apurinic endonuclease-redox protein [Arabidopsis lyrata subsp. lyrata] Length = 550 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 87/314 (27%), Gaps = 70/314 (22%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + V++++WN+N L + + Q A+ + DI+ LQE Sbjct: 279 PPLPEGTKCVKVMTWNVNGLRALLKLESFSA------------LQLAQRENFDILCLQET 326 Query: 75 G-SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 V ++ +S + ++ A+ + + + L Sbjct: 327 KLQVKDVEEIKNTLIDGYDHSFWSC------SVSKLGYSGTAIISRIKPLSVRYGTGLSG 380 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLK 192 D R V ++++ ++ + L L LS + L+ Sbjct: 381 SD--HDMEGRI-----VTAEFDSFYLINTYVPNSGDGLKRLSYRIEEWDRTLSNHIKELE 433 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP---------------NDSLIRF 237 P V+ GD N + + + + + Sbjct: 434 K--------SKPVVLTGDLNCAHEEIDIFNPAGNKRNAGFTIEERQSFGANFLDKGFVDT 485 Query: 238 PKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 +++ + +DYF++ ++ + D Sbjct: 486 FRKQHPGVVGYTYWGYRHGGRKTNRGWRLDYFLVSESIAANVH-----------DSYILP 534 Query: 289 GKRLSDHCPISIDY 302 SDHCPI + Sbjct: 535 DINGSDHCPIGLIL 548 >gi|253568552|ref|ZP_04845963.1| exodeoxyribonuclease [Bacteroides sp. 1_1_6] gi|251842625|gb|EES70705.1| exodeoxyribonuclease [Bacteroides sp. 1_1_6] Length = 254 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 89/305 (29%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++++N+N L L ++ + DI+ LQE + A Sbjct: 2 MKIITYNVNGLRAAASKGLP---------------EWLVQENPDILCLQETKLQPDQYPA 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +VF + + + + + + +A+ K + G Sbjct: 47 EVFEALGYKAYLYSAQKKGY----------SGVAILTKQEP----DHVEYGMGIEAYDNE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + + V+ ++ S D + + + + ++T+ +++ Sbjct: 93 GRF-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEDFQKYVTELRKT 140 Query: 202 LVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ GD+N + + + + + Sbjct: 141 RPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLSAGFIDSFRLLYPEKQE 200 Query: 246 NANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + R IDY + + L S + SDHCP+ Sbjct: 201 YTWWSYRFNSRAKNKGWRIDYCMTSEPVRPMLKSASILNDAVH-----------SDHCPM 249 Query: 299 SIDYD 303 +++ + Sbjct: 250 ALEIE 254 >gi|255590873|ref|XP_002535386.1| conserved hypothetical protein [Ricinus communis] gi|223523279|gb|EEF26997.1| conserved hypothetical protein [Ricinus communis] Length = 249 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 75/270 (27%), Gaps = 46/270 (17%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKV------FPKNTWCIFYSTERLINHSKRDSNND 109 L+Q DAD+VFLQE+ + + + W E S+ Sbjct: 2 ALKQAIGLFDADVVFLQEVQGKHDLKAAKYGAEHLGQKHWPAAAQHEYFAGESRHLHAAY 61 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKD---SFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 A+ + L ++P+ + S R + +++ + +HL Sbjct: 62 GMNAVYDHGHHGNALLSAFPIASQANRDVSDHAYEQRGILHCVLDTPAGPVHCYVVHLGL 121 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN--YLGNNDDF 224 F +Q Q L + + + P VIAGDFN N + Sbjct: 122 FEGS-------------RRRQTQALIAAVKESAPNGEPVVIAGDFNDWRNTLSAELYNAL 168 Query: 225 -----WKTIDPNDSL------IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273 + I+ +++ K +D + Sbjct: 169 GVVEAFDEIEGSNTALGEIMRKLRRKSSIVPARTFPAALPFFRLDRIYVRG--------- 219 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F +LSDH PI Sbjct: 220 -FKVDTAEVMHGS-LWAKLSDHAPIVASLT 247 >gi|153214876|ref|ZP_01949674.1| hypothetical protein A55_2851 [Vibrio cholerae 1587] gi|124115035|gb|EAY33855.1| hypothetical protein A55_2851 [Vibrio cholerae 1587] Length = 869 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 48/373 (12%), Positives = 89/373 (23%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R ++ + LDADIV L E Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116 + + S R D I T + Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162 R K V++ Q + ++ + R + ++ G KI V Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVIDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652 Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211 H KS + + L Q + VI GD Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712 Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243 N D I + + K Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDSGAEIKHSYGYLNAVAVKHP 772 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290 + +D+ ++ + ++ + I E + Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKTKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 833 RASDHDPAVLELN 845 >gi|295698348|ref|YP_003603003.1| exodeoxyribonuclease III [Candidatus Riesia pediculicola USDA] gi|291157399|gb|ADD79844.1| exodeoxyribonuclease III [Candidatus Riesia pediculicola USDA] Length = 267 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 80/307 (26%), Gaps = 74/307 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN + + L + K D DI+ LQE N++ Sbjct: 1 MKIVSFNING----------------IRAHFHQLYEIVKKYDPDIIGLQETKVENSL--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + + H +A+ K + R Sbjct: 42 --------FPKDGFDHKYHIYLNGRKSHHGVALFSKKKLFDINIRFFKENSNEEHR---- 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +I +++I+ ++ + L ++ +K Sbjct: 90 -VISANIFFQETEIQIINIYCPQGENRNNKIKFNKKKNFYKN-----LIKYVQKKIFENK 143 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N + K + + + K Sbjct: 144 NIILMGDMNISPEDQDIGIDPYHQNRWINLGKCGFLPEERIWMKKLKSFGLIDTYRKRNF 203 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + N + ID+ ++ + + D KR S Sbjct: 204 FKKNKFSWFDYRSNGFLNKVGLRIDFILVSKKLFDSCRSSGI-------DYSIRSMKRPS 256 Query: 294 DHCPISI 300 DH PI Sbjct: 257 DHAPIWA 263 >gi|269987019|gb|EEZ93294.1| exodeoxyribonuclease III [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 252 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 84/304 (27%), Gaps = 76/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++SWN+N L R+ + +++ + D++ LQE + K+ Sbjct: 1 MKILSWNVNGL--------------RSVARKNEIQKIINSQIYDVILLQETK-IEEINKL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 N + + + ++ + K + + G R Sbjct: 46 IETNGYVYYI---------MHSTVKKGYSGVITFCKETPINV----IYGIGHEKYDNEGR 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ I K ++++ + + S + + + + L+ Sbjct: 93 -----VITIELKDYFIVNSYFPNSRRDLSRLDFKKDFNEKILEFLEKLRKR--------K 139 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249 P VI GDFN L + I + + Sbjct: 140 PVVIGGDFNVAHTDLDIARPKQNDGNAGFTREERAFVDKFIEKGYIDTFRLFNKEGGNYS 199 Query: 250 NLRN----------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ + + + SDH P+ Sbjct: 200 WWTYLYKSAKANNIAWRIDYFLVSSELKNKVKAAGII-----------KKQEGSDHAPVF 248 Query: 300 IDYD 303 ++ D Sbjct: 249 VEVD 252 >gi|229524601|ref|ZP_04414006.1| extracellular nuclease-related protein [Vibrio cholerae bv. albensis VL426] gi|229338182|gb|EEO03199.1| extracellular nuclease-related protein [Vibrio cholerae bv. albensis VL426] Length = 869 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 48/373 (12%), Positives = 88/373 (23%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R ++ + LDADIV L E Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116 + + S R D I T + Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162 R K V + Q + ++ + R + ++ G KI V Sbjct: 593 RDKVVTLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652 Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211 H KS + + L Q + VI GD Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712 Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243 N D I + + K Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDSGAEIKHSYGYLNAVAMKHP 772 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290 + +D+ ++ + ++ + I E + Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 833 RASDHDPAVLELN 845 >gi|78049826|ref|YP_366001.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038256|emb|CAJ26001.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 263 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ SWN+N+L+ L+Q+ D+V +QE + + Sbjct: 5 MKIASWNVNSLN----------------VRLPHLQQWLAAFAPDVVGIQETKLEDHKFPD 48 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + +A+ ++ V Q Sbjct: 49 AALAALGYRSVFC------------GQKTYNGVAILSRSPAVDVQ-----MGIPGLDDVQ 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + ++++++ + + + + Y + DWI Q+ + Sbjct: 92 QRVIAATV-----DGVRIINLYVVNGQDVGTDKYAYK------LRWLAAAHDWIAQELQR 140 Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPND-----------SLIRFPKEKDSRCN 246 V+ GDFN + +D + D L + + Sbjct: 141 YPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAALDKLLALGLHDAFRLHNQDAE 200 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID ++ ++ D +R SDH P Sbjct: 201 HFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGI-------DREPRTWERPSDHAP 253 Query: 298 ISIDY 302 + Sbjct: 254 AWVRL 258 >gi|15823704|dbj|BAB68563.1| DNase I [Elaphe climacophora] gi|18147011|dbj|BAB82990.1| deoxyribonuclease I [Elaphe quadrivirgata] Length = 282 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 97/309 (31%), Gaps = 38/309 (12%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++ +LAL+ +++ +R+ ++NI + + + + + Sbjct: 1 MKTLLLALLGVASLLQLTLS--LRIGAFNIRAFG---------DKKLSNQTISSSIVRIL 49 Query: 62 KNLDADIVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 D+V +QE+ + AV K+ + LI+ ++ R+ Sbjct: 50 TTY--DLVLIQEVRDADLSAVKKLMQLVSGASPDPFGYLISKPLGHNSYKEQYLFVYRQD 107 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYS 178 V ++ Y G + + +R + + + ++ + L + Sbjct: 108 RVSPVESYYYDDGCEPCGNGTFSREPFIVKFAVPQAAVEELVLVPLHA------------ 155 Query: 179 PSCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + + L D K+ + ++ GDFN NY+ D + + Sbjct: 156 -APEAAVTEIDSLYDVYQDVKDRWGVTDALLLGDFNADCNYVQAEDWPSIRLRSSKDFQW 214 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFV-MDQNAYKFLIQESFSEILYNEDDIKS--RGKRLS 293 + N D V + + ++ + + + S +S Sbjct: 215 LIPDTADTTVTNTICAY----DRIVAVGSKLRESILPATAKVDNFQKTLKLSSKDALAVS 270 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 271 DHFPVEVTL 279 >gi|254477073|ref|ZP_05090459.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria sp. R11] gi|214031316|gb|EEB72151.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria sp. R11] Length = 242 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 45/282 (15%), Positives = 79/282 (28%), Gaps = 55/282 (19%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++RL ++NI K+ + + AD+V LQE Sbjct: 12 GRLRLATYNIQ-----------KSVGMDLRRRPRRTLKVIEGTGADLVLLQEADKR-LPP 59 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + +++ S A+ R +R++ Q + L Sbjct: 60 RPAALPHFVLDEAGWHIVDLGGAGSLGWHGNAVIWRGDALRLVDQGHIPLPG------LE 113 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R AV E + V+ HL +Q L I E Sbjct: 114 PRGAVWARFETALGPLRVVGAHLGLTT-------------RARHEQVHHLARHIA--SEP 158 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 +P V AGDFN + I P + + LR +D Sbjct: 159 DLPTVCAGDFN-----EWSRQPVLDHIAPQLRFV-------PPKASFPALRPIGALDRIA 206 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + + SDH P+ D + Sbjct: 207 VSRGLRV----------VESGVYRARPAHVASDHLPVWADLE 238 >gi|329768092|ref|ZP_08259601.1| exodeoxyribonuclease III [Gemella haemolysans M341] gi|328838247|gb|EGF87859.1| exodeoxyribonuclease III [Gemella haemolysans M341] Length = 254 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 83/303 (27%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +S+N+N L G + ++ K LDAD LQE A Sbjct: 1 MKCISFNVNGLRAIVGKNFEED---------------FKKLDADFFCLQETK-MQAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 N + +++ + ++ A+ K+ + + D+ R Sbjct: 45 LQFNGYYSYFN----------YAERKGYSGTAIYTKHEPINVTYGIGIEEHDTEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + K + + ++ + L Sbjct: 91 -----VITLEYDKFFFITVYTPNSGSELKRLEYRMSWEEDFKNYLLELNK--------TK 137 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GD N + + + + + F A Sbjct: 138 GIVVCGDLNVAHTEIDLKNPKSNTKNAGFTQEEREKFTKLLDAGFIDTFRYYNPDLTGAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ ++ K+L + ++ SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFLVSRDLEKYLESAAIHNEIF-----------GSDHCPVE 246 Query: 300 IDY 302 + Sbjct: 247 LVL 249 >gi|225175437|ref|ZP_03729432.1| exodeoxyribonuclease III Xth [Dethiobacter alkaliphilus AHT 1] gi|225169189|gb|EEG77988.1| exodeoxyribonuclease III Xth [Dethiobacter alkaliphilus AHT 1] Length = 260 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 33/303 (10%), Positives = 81/303 (26%), Gaps = 67/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N + R L + + D D++ LQE+ + Sbjct: 1 MKICTFNVN------------SVRAREELLLKWLEK--RGTDIDVLCLQEIKVTDD---- 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +AV K + G D R Sbjct: 43 ------KFPRQAFESLGYQCTVFGQQRYNGVAVCSK----EGAQQVVTGFGDENWDQQKR 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++ V++++ S + Y ++ +++ + Sbjct: 93 -IMHCRI----GEVTVVNVYAPHGDLRGSEKYIYKQK------WYRYFLEYLQRNFSPSD 141 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P V+ GD N + +D D++ Sbjct: 142 PLVVVGDLNVALEDLDVHDPKLLEDTVCTMPEERRWLQDVLDWGLVDSFRHLNPDAQSFT 201 Query: 248 NK-------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY + + + + + R + SDH P+ + Sbjct: 202 WWDYVGGAIWQDKGMRIDYILCSKPLAEKMAEVEVDLWPRR-----RRTPKPSDHAPVIL 256 Query: 301 DYD 303 + Sbjct: 257 SLN 259 >gi|223985143|ref|ZP_03635238.1| hypothetical protein HOLDEFILI_02544 [Holdemania filiformis DSM 12042] gi|223962889|gb|EEF67306.1| hypothetical protein HOLDEFILI_02544 [Holdemania filiformis DSM 12042] Length = 252 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 77/304 (25%), Gaps = 75/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + DADI LQE Sbjct: 1 MKLISWNVNGLRACIQKGFM---------------DFFNEQDADIFALQETK-LQPHQIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + +S + R Sbjct: 45 LELPGYHQYWHSAERKGYSGTAVFTKQKP------------LSVRYDFDEAEGEHPKEGR 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++ + + ++ + + + +++ L + Sbjct: 93 -----VITLEFEQFYFVTAYVPNSKEELARLDYRMQWEDAMARHLAKLNE--------TK 139 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN----------DSLIRFPKEKDSRCNA----NK 249 P V GD N + + + +P D L + Sbjct: 140 PVVYTGDLNVAVEEIDLKNPKTNHFNPGFSDQERQKMRDLLSLGFADTFRTLYPEKVEYS 199 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF++ Q + D + SDHCP+ + Sbjct: 200 WWSYRFNSRAKNVGWRIDYFIVSQRLMNQVK-----------DSVIYGDILGSDHCPVGV 248 Query: 301 DYDF 304 + +F Sbjct: 249 EIEF 252 >gi|110633439|ref|YP_673647.1| exodeoxyribonuclease III [Mesorhizobium sp. BNC1] gi|110284423|gb|ABG62482.1| Exodeoxyribonuclease III [Chelativorans sp. BNC1] Length = 259 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 83/304 (27%), Gaps = 72/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN ++ L ++ D+V LQE+ + + Sbjct: 1 MKIATFNINNIN----------------KRLPNLLEWLHLSKPDVVCLQELKATDDA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + +A+ + + L G + R Sbjct: 42 -------FPKSAIESFGYRAVWKGQKSWNGVAILSRVGEPVLTRTRLPGDA---ADTQAR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + + I+ + + Y + + L+ T +++ Sbjct: 92 YIEAAV-----RGVLIASIYAPNGNPQPGPKFDYKLA------WLERLRKHATALRKTGA 140 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGDFN + ++ + + Sbjct: 141 PIVLAGDFNVAPTDIDIYPTKSWGDNALIQPESRAAFRRLLGRSWTDGIRLLHPEQ-RIY 199 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 K +D+ ++ +N +++ D + SDH P Sbjct: 200 TFWDYKRLRWQRDAGLRLDHLLLSENLRGAIVKAGV-------DRDVRGREGASDHAPAW 252 Query: 300 IDYD 303 I+ + Sbjct: 253 IELN 256 >gi|323483337|ref|ZP_08088727.1| hypothetical protein HMPREF9474_00476 [Clostridium symbiosum WAL-14163] gi|323691163|ref|ZP_08105441.1| exodeoxyribonuclease III [Clostridium symbiosum WAL-14673] gi|323403435|gb|EGA95743.1| hypothetical protein HMPREF9474_00476 [Clostridium symbiosum WAL-14163] gi|323504773|gb|EGB20557.1| exodeoxyribonuclease III [Clostridium symbiosum WAL-14673] Length = 251 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 73/302 (24%), Gaps = 78/302 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +L+SWN+N L G K LDADI +QE Sbjct: 3 KLISWNVNGLRACVGKGF---------------LDIFKELDADIFCIQE-SKLQGGQIDL 46 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + + ++S + + A+ K + + A D R Sbjct: 47 ELDGYYQYWSYAEKKGY----------SGTALFTKEEPLSVTYGLGIEAHDHEGR----- 91 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ +V+ + + + + L++ P Sbjct: 92 ----VITAEFPDYYVITCYTPNSQDGLARLPYRMQWEDDFLSYLKKLEEH--------KP 139 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + GD N + + + + + + Sbjct: 140 VIFCGDLNVAHREIDLKNPKSNRKNAGFTDEERGKFTQLLESGFIDTYRHFYPDQEGIYS 199 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF + + L + SDHCP+ + Sbjct: 200 WWSYRFKAREKNAGWRIDYFCVSKALEDRLESAMIHTEI-----------MGSDHCPVEL 248 Query: 301 DY 302 Sbjct: 249 VI 250 >gi|256419936|ref|YP_003120589.1| exodeoxyribonuclease III Xth [Chitinophaga pinensis DSM 2588] gi|256034844|gb|ACU58388.1| exodeoxyribonuclease III Xth [Chitinophaga pinensis DSM 2588] Length = 254 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 84/304 (27%), Gaps = 75/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+VS+N+N L ++ K ADI+ LQE+ A Sbjct: 1 MRIVSYNVNGLRSAMNKGF---------------TEWLKTDPADIICLQEI---KAHKDN 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ +AV K + G S A R Sbjct: 43 VDYKQFEELGFEHYWYPAQ-----KKGYSGVAVLTKITP----DHVQYGNGFMQSDAEGR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ ++ I +++ ++ S D + + Q + ++ Q K + Sbjct: 94 -----VIRLDFGDITLINTYMPSGTSGDERQ-------TYKYQWLEEFYGYVDQLKATRP 141 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GD+N +L + + N + F + Sbjct: 142 NLIICGDYNICHKPIDIHDPVGNKKSSGFLPEERAWLDKLFSNGFVDTFRHYHPEP-HQY 200 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDY + L + SDHCPI Sbjct: 201 SWWSVRTNARANNKGWRIDYISVTAPLQPKLKDALIW-----------PDVKHSDHCPIY 249 Query: 300 IDYD 303 + + Sbjct: 250 LQLE 253 >gi|260589662|ref|ZP_05855575.1| exodeoxyribonuclease III [Blautia hansenii DSM 20583] gi|331083093|ref|ZP_08332210.1| exodeoxyribonuclease [Lachnospiraceae bacterium 6_1_63FAA] gi|260539902|gb|EEX20471.1| exodeoxyribonuclease III [Blautia hansenii DSM 20583] gi|330405095|gb|EGG84632.1| exodeoxyribonuclease [Lachnospiraceae bacterium 6_1_63FAA] Length = 251 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 80/304 (26%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L ++ + DAD +QE Sbjct: 1 MKFISWNVNGLRACVKKGF---------------TEFFEQTDADFFCIQETKLQEG-QID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + +++ + ++ A+ K + Q + D R Sbjct: 45 FEPEGYFCYWN----------YAVKKGYSGTAIFAKKEPLSVQYGIGIEEHDQEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + + Q L + Sbjct: 91 -----VITLEYENFYMVTVYTPNSQSELARLSYRMQWEDDFRAYLQQL--------DEKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + T F + Sbjct: 138 PVIMCGDLNVAHQEIDLKNPKTNRHNAGFTDEEREKFTTFLDAGFTDTFRYFYPDKTEIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + L+ S ++ SDHCP+ Sbjct: 198 SWWSYRFKAREKNAGWRIDYFCTSKRLDEKLLSASIHTDIF-----------GSDHCPVE 246 Query: 300 IDYD 303 + + Sbjct: 247 VQIE 250 >gi|154490204|ref|ZP_02030465.1| hypothetical protein PARMER_00436 [Parabacteroides merdae ATCC 43184] gi|154089096|gb|EDN88140.1| hypothetical protein PARMER_00436 [Parabacteroides merdae ATCC 43184] Length = 253 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 88/305 (28%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++++N+N L G L ++ D++ LQE + A Sbjct: 1 MKIITYNVNGLRAAVGKGLP---------------EWLAQEQPDVLCLQETKLQPEQYPA 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F + + + + + + +A+ + + G Sbjct: 46 EAFEALGYKAWLFSAQKKGY----------SGVAILSRREP----DHVEYGMGIEKYDNE 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + + V+ ++ S D + + + + ++++ + ++S Sbjct: 92 GRF-----IRADFGDLSVISVYHPSGTSGDERQ-------AFKMEWLEDFQNYVVELQKS 139 Query: 202 LVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ GD+N + + +D D + Sbjct: 140 RPKLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLDAGYIDTFRLLNPDKQE 199 Query: 246 NANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + R IDY ++ + + + + SDHCP Sbjct: 200 YTWWSYRFSARAKNKGWRIDYCMVSEPMKAQVEKAYILNEAVH-----------SDHCPA 248 Query: 299 SIDYD 303 I+ Sbjct: 249 VIEVS 253 >gi|288554501|ref|YP_003426436.1| endonuclease/exonuclease/phosphatase [Bacillus pseudofirmus OF4] gi|288545661|gb|ADC49544.1| endonuclease/exonuclease/phosphatase [Bacillus pseudofirmus OF4] Length = 265 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 82/298 (27%), Gaps = 52/298 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNA 79 ++L++ N++ + L + D++ LQE+ + Sbjct: 2 PLKLLTLNVH-----------AWQEENQEKKLDHLVKTIFEEQYDVIALQEVSQHRDQDV 50 Query: 80 VAKVFPKNTWCIFY---------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 V + + + ++ IA+ ++ + + + Sbjct: 51 VEGQIKADNYGYILQKKLKELGSAPYEMVWAPCHYGYEVFEEGIALLTRHPIIESTDFYV 110 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 +++ + +R V L+EI+ K I HL + D+ E Q Sbjct: 111 TKSREMKNWK-SRNIVGALIEIDNKPIHFYSCHL--GWWEDTEEPAR--------GQMDA 159 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 L + I + + GDFN + D+ D+ ++ K Sbjct: 160 LLEQI----PADGRVFLMGDFNNHADMRNEGYDYLIQNGFYDTFTLADEKDSGVTVEGKI 215 Query: 251 LRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID + +Q + +SDH + Sbjct: 216 AGWDQNKRGIRIDLILTNQK---------VNVFSSKVIFNGRNRDIVSDHFGVEAVIT 264 >gi|261362084|gb|ACX71474.1| sphingomyelinase [Bacillus cereus] Length = 238 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 79/218 (36%), Gaps = 21/218 (9%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDHFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDD 223 Q + ++D+I + + +I GD N N D Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKSD 235 >gi|284989389|ref|YP_003407943.1| endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM 43160] gi|284062634|gb|ADB73572.1| Endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM 43160] Length = 257 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 74/304 (24%), Gaps = 79/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78 +R+ ++NI D L K+LDAD++ LQE+ Sbjct: 1 MRIATFNILHGRSPVDD----------RVDVERLATAVKDLDADVLGLQEVDRDQPRSLG 50 Query: 79 ------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDI----HTAIAVRKKNVRVLQQSY 128 A + ++ + + ++ IA+ + V + Sbjct: 51 SDLTAVAAEAMGAVDSQFVAALHGTPGGTWMAATGDEQPGSATYGIALLSRYPVVSWRVV 110 Query: 129 PLLGAKDSFSRAG------------NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 L + R AV +++ + V + HL Sbjct: 111 RLPALRSRVPVWFRGAPRPKLVGDEPRVAVAAVLDGPSGQFTVCNTHLSFVPGWG----- 165 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 A L + + P V+ GD N + + + Sbjct: 166 -----------ALQLSKLVRSLTGTREPLVLMGDLNMQAGQA-------------ERVSG 201 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ + ES LSDH Sbjct: 202 LRPLAPATTPTFPVDEPARQLDHVLARGPIAATGPAESVR-------------LPLSDHR 248 Query: 297 PISI 300 + + Sbjct: 249 ALVV 252 >gi|229084175|ref|ZP_04216463.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44] gi|228699133|gb|EEL51830.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44] Length = 190 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 61/184 (33%), Gaps = 15/184 (8%) Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----PSC 181 ++ P +D+ R+ + G+ I V+ HL S + S Sbjct: 11 ETNPTRIGQDNPLFESTRKPLAAEFTFQGQNIVVVSNHLNSKLGDATPFGKIQPLVFKSE 70 Query: 182 SLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 Q AQ + ++ QKK++ P V+ GD N + + + Sbjct: 71 EKRIQLAQEVNSFVKGIQKKDANAPVVVVGDMNDFEFSKP-----LQALKGDVMKDMLET 125 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + N +D+ ++ N + + ++ +I R+SDH P+ Sbjct: 126 VSKDNRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGRVSDHDPVL 181 Query: 300 IDYD 303 D Sbjct: 182 AQID 185 >gi|147674583|ref|YP_001218114.1| hypothetical protein VC0395_A2198 [Vibrio cholerae O395] gi|262170130|ref|ZP_06037819.1| extracellular nuclease-related protein [Vibrio cholerae RC27] gi|146316466|gb|ABQ21005.1| hypothetical protein VC0395_A2198 [Vibrio cholerae O395] gi|227014509|gb|ACP10719.1| extracellular nuclease-related protein [Vibrio cholerae O395] gi|262021538|gb|EEY40250.1| extracellular nuclease-related protein [Vibrio cholerae RC27] Length = 869 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 48/373 (12%), Positives = 89/373 (23%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R ++ + LDADIV L E Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116 + + S R D I T + Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVEIDSNGDGKTDAADSLGTDVITTGVIY 592 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162 R K V++ Q + ++ + R + ++ G KI V Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVINANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652 Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211 H KS + + L Q + VI GD Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712 Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243 N D I + + K Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDSGAEIKHSYGYLNAVAMKHP 772 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290 + +D+ ++ + ++ + I E + Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 833 RASDHDPAVLELN 845 >gi|299782782|gb|ADJ40780.1| Exodeoxyribonuclease [Lactobacillus fermentum CECT 5716] Length = 279 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 86/305 (28%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R +SWNI++++ + + R + + K D++ +QE + Sbjct: 1 MRFISWNIDSINAALTGTSARAEETR------AVLEKIKAAAPDVIAIQETKLSKSGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ S + + K + +YP +GA + + G Sbjct: 55 KHQGVLAELFAGYTVVWRSSVEPARKGYAGTMYLYKESLTPKVTYPTIGAPEPMDKEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++ +++ + + L + Sbjct: 114 -----IITLEFENFYLTEVYTPNSGTGLKRLAERQEWDDRYREYLTEL--------DRQK 160 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + +GDFN + + + F A Sbjct: 161 PVIASGDFNVAHEEIDLAHPANNHHSAGFTDEEREKFTALLAAGFTDSFRSLHPDETGAY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY+++ ++ + + DH PI Sbjct: 221 SWWAQRAVTSKVNNSGWRIDYWLVSDRLADQVVSSTMIDSGERR-----------DHAPI 269 Query: 299 SIDYD 303 +D + Sbjct: 270 QLDIN 274 >gi|169347307|ref|ZP_02866245.1| hypothetical protein CLOSPI_00022 [Clostridium spiroforme DSM 1552] gi|169293924|gb|EDS76057.1| hypothetical protein CLOSPI_00022 [Clostridium spiroforme DSM 1552] Length = 252 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 77/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + + K+ DADI +QE ++ Sbjct: 1 MKLISWNVNGIRACINKGFY---------------DILKDFDADIFCIQETKMQEGQIEI 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ V K + + D R Sbjct: 46 EDHGYYLYMNSAV-----------KKGYSGTLVFTKVKPLSYSYGINIEEHDQEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + K ++++ + + + L++ Sbjct: 91 -----VITLEYNKFYLVNCYTPNSQDGLKRLEYRQVWEDDFLAYLKSLEE--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + F A Sbjct: 138 PVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAKMTQLLNHGFIDTFRYLYPDLQGAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ + + D + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFIVSDCLKEKIK-----------DAYIFKDIMGSDHCPVG 246 Query: 300 IDYD 303 +D + Sbjct: 247 LDIE 250 >gi|260889134|ref|ZP_05900397.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia hofstadii F0254] gi|260861194|gb|EEX75694.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia hofstadii F0254] Length = 240 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 71/284 (25%), Gaps = 48/284 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + R++++NI +G L + K D V LQE+ + Sbjct: 2 EFRIMTYNIYGARLADG---------------KKLAKSIKKYKPDFVALQEVDKNTKRSN 46 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 K + IA K + L Sbjct: 47 FRDVTQDFALELGYNYYYFQKAMDFDKGEFGIAFVSKYDVKNIYVHELPSVG-----KEK 101 Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R+ + + K I V++ HL + S Q L I Sbjct: 102 RQVLAAQISSKYKKHILVINTHLDYEPAVKS-------------TQIDDLMTVIDYF--K 146 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 + GDFN D + + + IDY + Sbjct: 147 GDIKFLCGDFNLLPTTEYYRKIAENWNDTYFEGKDLENKSNLENRNLET----QRIDYIM 202 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP--ISIDYD 303 + Q + +D +LSDH P + ++ + Sbjct: 203 AKKGENYRTKQS------FFINDDSQEWTKLSDHLPYMVVLEIE 240 >gi|206602794|gb|EDZ39275.1| Exodeoxyribonuclease III [Leptospirillum sp. Group II '5-way CG'] Length = 265 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 87/303 (28%), Gaps = 72/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +WN+N+L + + AD+V LQE +A Sbjct: 11 FKTTTWNVNSL----------------KVRLPQVLDWLVREKADVVCLQETKLPDA---- 50 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + R I + S + +A+ L ++ D R Sbjct: 51 ------QFPFQAFREIGYDAVWSGQPTYNGVAILSNTPIELTEASMDDHPDDH------R 98 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + + ++++++ + LDS + TY + L +I + +E+ Sbjct: 99 RFLSARI----RGVRIVNVYVPNGQDLDSPKFTYK------LEWLNRLTRYIEKVREARE 148 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPN------DSLIRFPKEK 241 P ++ GDFN + + Sbjct: 149 PVLLMGDFNIVPGDLDTWDPEGFKDQIFHSPPERKALGNIFQAGFSDLYRTLYPDRQEFS 208 Query: 242 DSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 RN+ ID + + + D + +R SDH P++ Sbjct: 209 WWDYRMGSFHRNRGLRIDLILSTPPLSEQCREVFI-------DREARKAERPSDHVPVTA 261 Query: 301 DYD 303 + Sbjct: 262 LFS 264 >gi|76818411|ref|YP_335567.1| putative endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1710b] gi|76582884|gb|ABA52358.1| putative Endonuclease/Exonuclease/phosphatase family protein [Burkholderia pseudomallei 1710b] Length = 1153 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 75/285 (26%), Gaps = 56/285 (19%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 +++R+ ++NI+ T S + L AD++ LQE+ Sbjct: 862 QPRTRELRIATYNIHG-----------GLGAWTASAAERIAVVLDELCADVIALQEVPLG 910 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A + T AV + + L SF Sbjct: 911 GARGADV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----SF 962 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R A++ +E + V+ HL S + S Q L + Sbjct: 963 GNREPRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LAA 1006 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 +P ++ GD N + F + + F + R + Sbjct: 1007 FDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS--L 1055 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D + ++L+ + DH P+ Sbjct: 1056 DRIWVHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 1090 >gi|298207997|ref|YP_003716176.1| hypothetical protein CA2559_07085 [Croceibacter atlanticus HTCC2559] gi|83850638|gb|EAP88506.1| hypothetical protein CA2559_07085 [Croceibacter atlanticus HTCC2559] Length = 340 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 40/323 (12%), Positives = 92/323 (28%), Gaps = 69/323 (21%) Query: 2 IRKYVLALVFFLVPCTASVA-------------QKVRLVSWNINTLSEQEGVSLWKNSVK 48 R+ ++L+ L+ + + ++S+N+ + + + S Sbjct: 65 RRQLFMSLLILLIGFANLSSFYKFSESKKVGDEEHFSVMSYNVKSFNRYNWIDAENIS-- 122 Query: 49 RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108 + + DI+ +QE S + +K+ + + N Sbjct: 123 ------DSIAHFIAQEQPDILAVQEYFSES--SKIDRAFKYKYIKTKT-----------N 163 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 + A + + S A ++ A+ + V + + HL+S Sbjct: 164 NSRFGQAFFSEYPIINSGSVDFESAGNN--------AIFIDVVYKKDTLRFYNAHLESLR 215 Query: 169 FLDSLENTYSPSCSLL--------SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 ++++ L Q ++ + S +I D N Sbjct: 216 LKPNVKDLQEEGSERLLGRVGGTFKVQQDQMEQLKAHIETSPYKVIICSDLNNSAFSY-- 273 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 ++ I N F + + + ID+ + S+ Sbjct: 274 ---VYRAIKGNTYKDAFKLAGNGFGKSFDLDFFPLRIDFIL--------------SDKTI 316 Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303 + K+ SDH PI D+ Sbjct: 317 PIKGFTTYTKKFSDHFPIKADFS 339 >gi|53734141|gb|AAH83404.1| Ttrap protein [Danio rerio] Length = 379 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 43/294 (14%), Positives = 90/294 (30%), Gaps = 48/294 (16%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + K+ ++SWN++ L + L Y D+VFLQE+ Sbjct: 126 SEVEDSKLSIISWNVDGLDTLNLADRARG-----------LCSYLALYTPDVVFLQEL-- 172 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + + S++ T I +RK V+ L+ Sbjct: 173 ---------IPAYVQYLKKRAVSYLFFEGSDDGYFTGIMLRKSRVKFLESEIICFPTT-- 221 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R + V +G+K++++ HL+S ++Q + + I Sbjct: 222 ---QMMRNLLIAQVTFSGQKLYLMTSHLESC----------KNQSQERTKQLRVVLQKIK 268 Query: 197 QKKESLVPFVIAGDFNRKINY-------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + + AGD N + D W+ + + R+ + + N Sbjct: 269 E-APEDAIVIFAGDTNLRDAEVANVGGLPAGVCDVWEQLGKQE-HCRYTWDTKANSNKTV 326 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ D + + + + G+ SDH I ++ Sbjct: 327 PYVSRCRFDRIFLRSAKTGP--PVTPDHMALIGMEKLDCGRYTSDHWGIYCTFN 378 >gi|29346040|ref|NP_809543.1| exodeoxyribonuclease [Bacteroides thetaiotaomicron VPI-5482] gi|29337934|gb|AAO75737.1| exodeoxyribonuclease [Bacteroides thetaiotaomicron VPI-5482] Length = 253 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 89/305 (29%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++++N+N L L ++ + DI+ LQE + A Sbjct: 1 MKIITYNVNGLRAAASKGLP---------------EWLVQENPDILCLQETKLQPDQYPA 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +VF + + + + + + +A+ K + G Sbjct: 46 EVFEALGYKAYLYSAQKKGY----------SGVAILTKQEP----DHVEYGMGIEAYDNE 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + + V+ ++ S D + + + + ++T+ +++ Sbjct: 92 GRF-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEDFQKYVTELRKT 139 Query: 202 LVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ GD+N + + + + + Sbjct: 140 RPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLSAGFIDSFRLLYPEKQE 199 Query: 246 NANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + R IDY + + L S + SDHCP+ Sbjct: 200 YTWWSYRFNSRAKNKGWRIDYCMTSEPVRPMLKSASILNDAVH-----------SDHCPM 248 Query: 299 SIDYD 303 +++ + Sbjct: 249 ALEIE 253 >gi|21244888|ref|NP_644470.1| exodeoxyribonuclease III [Xanthomonas axonopodis pv. citri str. 306] gi|21110598|gb|AAM39006.1| exodeoxyribonuclease III [Xanthomonas axonopodis pv. citri str. 306] Length = 259 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 84/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ SWN+N+L+ L+Q+ D+V +QE + + Sbjct: 1 MKIASWNVNSLN----------------VRLPHLQQWLAAFAPDVVGIQETKLEDHKFPD 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + +A+ ++ + Q Sbjct: 45 AALAALGYRSVFC------------GQKTYNGVAILSRSPAIDVQ-----MGIPGLDDVQ 87 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + ++++++ + + + + Y + DWI Q+ + Sbjct: 88 QRVIAATV-----DGVRIINLYVVNGQDVGTDKYAYK------LRWLAAAHDWIAQELQR 136 Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPND-----------SLIRFPKEKDSRCN 246 V+ GDFN + +D + D L + + + Sbjct: 137 YPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAALDKLLALGLHDAFRLHNQDAD 196 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID ++ ++ D +R SDH P Sbjct: 197 HFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGI-------DREPRTWERPSDHAP 249 Query: 298 ISIDY 302 + Sbjct: 250 AWVRL 254 >gi|24214114|ref|NP_711595.1| hypothetical protein LA_1413 [Leptospira interrogans serovar Lai str. 56601] gi|24195001|gb|AAN48613.1| hypothetical protein LA_1413 [Leptospira interrogans serovar Lai str. 56601] Length = 360 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 92/321 (28%), Gaps = 66/321 (20%) Query: 23 KVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 K++++ WN+ L+ S + + Y + D D++ Q Sbjct: 51 KIKVLVWNVQYLAGKKRIFWYDLPNGDGPDTGPSKEEIEETLKKVADYIHSEDPDVILFQ 110 Query: 73 EMGS-------YNAVAKVFPKNTWCI------FYSTERLINHSKRDSNNDIHTAIAVRKK 119 E+ + + ++ + FY + H K + + A + K Sbjct: 111 ELHDGAENTFREDQLERILSRIGSEYVCRSEAFYWKSNFVPHPKILGSVGMKLATISKYK 170 Query: 120 NVRVLQQSYPLLGAKDSFSRAGN-RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTY 177 ++ S PL+ A ++ R ++ + I G K VL+ HL +F + Sbjct: 171 ISDGIRHSLPLMPADPISTQFNLKRAILQNDLPIEGGDKFTVLNTHLDAFSQGTDTMHR- 229 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI----------------NYLGNN 221 Q + + + + + +V+ GDFN + Sbjct: 230 ---------QVETITGLLKELDLAGHYWVLGGDFNLIPPGFDRKSMHPNGAFFYSDEQEI 280 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFS 276 + + + + IDY N + + Sbjct: 281 KPLFDRWNSAVPFKILNGPEKEKYYTYYPNDPAIGKPDRTIDYIFYSSNLKQ----SGYK 336 Query: 277 EILYNEDDIKSRGKRLSDHCP 297 D K +SDH P Sbjct: 337 V------DQKDILWTISDHFP 351 >gi|46906561|ref|YP_012950.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes serotype 4b str. F2365] gi|47091460|ref|ZP_00229257.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes str. 4b H7858] gi|46879826|gb|AAT03127.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes serotype 4b str. F2365] gi|47020137|gb|EAL10873.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes str. 4b H7858] gi|328467778|gb|EGF38824.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes 1816] Length = 257 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 40/282 (14%), Positives = 74/282 (26%), Gaps = 36/282 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + ++NI K TL + D + ++E + + Sbjct: 2 FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEEPLLPQ-MRDM 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 W F + ++ + P + + S + R Sbjct: 54 KEMQDWDYFGVGRDDGFEKGEFTAVFYNSTRFTLLQEGHFWLSETPEVPSIHSTAM-FPR 112 Query: 144 RAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 V +E +GK+ ++ + HL A L + Sbjct: 113 ICVWGKLEDSTDGKQFYIFNTHLDHIS-------------EEARLFASQLLLHKASLIQE 159 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPID 258 +P ++ GDFN + + N + D K + + LR ID Sbjct: 160 DLPVILLGDFNTEPSTPTYNLITQRYQDAQLLSKTPVKGPLGSFHDFQPLRPESELEKID 219 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 Y + F Y + G SDH P+ Sbjct: 220 YIFVSNE---------FHICSYETSTDEIDGCSASDHFPVMA 252 >gi|332308078|ref|YP_004435929.1| Endonuclease/exonuclease/phosphatase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175407|gb|AEE24661.1| Endonuclease/exonuclease/phosphatase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 237 Score = 82.7 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 36/281 (12%), Positives = 89/281 (31%), Gaps = 52/281 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+V++NI++ + V Y+ + Q+ + + DI +QEM + + Sbjct: 1 MRIVTYNIHSGVGVDEV-----------QSYSRIGQFLASQNVDIALIQEMDTRPC-ERD 48 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + + ++ S AV + + ++ + R Sbjct: 49 TEQDIKDLSANHFIALSRSPALEETHGWYGNAVLSRYPVLSTKTVDVSQDGF-----QPR 103 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESL 202 E++++ + + V++ H +Q L +++ Q S Sbjct: 104 NIQEVVLDTHVGPVRVINTHKGLKK-------------QERRKQFALLAEYLEQSMAVSS 150 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 +P ++ GDFN + + + ++K + +D Sbjct: 151 IPLIVGGDFNEWQFFTRAFRTINQVL---------TEQKVAATFPTAWPLF--RLDRMWT 199 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + SDH PI + +D Sbjct: 200 S------FNDNKIEAQVLKTPET----RYYSDHYPILLTFD 230 >gi|313158853|gb|EFR58233.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 299 Score = 82.7 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 95/336 (28%), Gaps = 75/336 (22%) Query: 2 IRKYVLALVFFLVPCTASVAQK-------------------------------VRLVSWN 30 ++KY+ ++ + C A+ RLV++N Sbjct: 4 LKKYLTIMLLLGLTCPATACNSSSSSEDEVPPHLKPETPEEPGRDYYPKADGATRLVTYN 63 Query: 31 INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-KVFPKNTW 89 + ++ Y ++ AD+V + E+ S +VF + Sbjct: 64 VGVFTKYISDGS-----------YQMIADMMTEGKADLVGISELDSCTVRTGRVFQLKKF 112 Query: 90 CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149 E +S+ + + + V + PL A R V + Sbjct: 113 AGLMGKEWSYEYSRAMAYQGGAYGDGIASREKPVRTFAAPLPKGDG----AEPRVMVVME 168 Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-TQKKESLVPFVIA 208 E K HL S + Q + I + S P + Sbjct: 169 FE----KYVFATTHLDH------------VSTLAQAGQVDEINKVIEREFGGSKKPVFLG 212 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 GDFN + + + + P ++++ IDY ++ Sbjct: 213 GDFNARPDSPTISKL------KTGWTVLTPHGASDFTHSSQAPNKC--IDYILLWNGNGA 264 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +L D K KR SDH P+ +D F Sbjct: 265 KCDVVGTKIML---DFNKGDIKRASDHIPVLVDVKF 297 >gi|256762238|ref|ZP_05502818.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis T3] gi|256683489|gb|EEU23184.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis T3] Length = 254 Score = 82.7 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 84/287 (29%), Gaps = 48/287 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+ V + + + + Q D + +QE+ Sbjct: 1 MKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138 Y+T ++ + AI ++ V+ + Y L Sbjct: 54 A--------YTTFTCLSAEREGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHPE 105 Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A+ L + V+++HL + + ++ + L D I Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDNIA 157 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNANKNLRNK 254 Q P ++ GDFN + + + K N + P+ K Sbjct: 158 QY-----PTLLMGDFNAE-SGEEVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAEL 211 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + + + G+ SDH P+ + Sbjct: 212 EEIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248 >gi|256831937|ref|YP_003160664.1| 5'-Nucleotidase domain-containing protein [Jonesia denitrificans DSM 20603] gi|256685468|gb|ACV08361.1| 5'-Nucleotidase domain protein [Jonesia denitrificans DSM 20603] Length = 1506 Score = 82.7 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 93/350 (26%), Gaps = 78/350 (22%) Query: 23 KVRLVSWNINTLSEQEGVSL----------------------WKNSVKRTTSDYT----- 55 + L S+N+ G ++ R D Sbjct: 298 DITLASFNVLNYFTTTGEDWINAGHTCSSYTDKDGQAITTRSCSDNGPRGAWDTESFTRQ 357 Query: 56 --LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN------ 107 + LDA +V L E+ + A+ + + T + + + + Sbjct: 358 QNKIVAAINALDASVVGLLEIENSAALGEDTDEATTTLVAALNAAAGEKRWAAVASSQQL 417 Query: 108 ------NDIHTAIAVRKKNVRVLQQSYPL---LGAKDSFSRAGNRRAVELLVEINGKKIW 158 + I AI + +V +L Q L GA +FS A + +G+ + Sbjct: 418 PPASEQDAITNAIIYQVDHVELLGQPQALGDKSGAGQAFSNAREPIGQAFIPATDGEPFF 477 Query: 159 VLDIHLKSF------CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV--------P 204 + H KS D + S + QA L W+ +++ Sbjct: 478 YVVNHFKSKGSAGPLPGDDDQGDGQGSSNASRVAQATALTQWVPTALDTIAKETGTTITD 537 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 +AGDFN + + + +D+ + + Sbjct: 538 VALAGDFNAYTREDP-----MTVLSDAGYTNAAATHAPDKA-SYSYQGLSGSLDHILYND 591 Query: 265 NAYKFLIQESFSEILYNEDDIKSR--------------GKRLSDHCPISI 300 + + I E R SDH P+ + Sbjct: 592 SFADRITGADIWNINAPESIALEYSRYNYHGTVFYENNAYRSSDHDPVIV 641 >gi|163802061|ref|ZP_02195957.1| aspartyl-tRNA synthetase [Vibrio sp. AND4] gi|159174202|gb|EDP59010.1| aspartyl-tRNA synthetase [Vibrio sp. AND4] Length = 428 Score = 82.7 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 42/295 (14%), Positives = 95/295 (32%), Gaps = 32/295 (10%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + ++++++N+ L T + + K+ DIVF+QE+ Sbjct: 156 AVKPTERDSLKVLTYNVWMLPHVGSN---------MDIRATRIAEEVKDH--DIVFMQEV 204 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + ++ + I+ ++ + V ++ QS + Sbjct: 205 -----FRRKNEEDIYFTMNEHFDYISDKLDGGGSNTYDGGVVTFSKFPIITQSQYVFNNC 259 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A ++ + + + +L++HL S+ + Q +K + Sbjct: 260 IGTDCAADKGVLYTKILKDDHNFHLLNLHLGSW--------NSRSHRDVRILQIYEIKAF 311 Query: 195 ITQ-KKESLVPFVIAGDFN-RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN-- 250 + Q P ++ GDFN K + + +++ + + P + N N Sbjct: 312 LEQLSIPDGEPIILGGDFNIAKYKFPLDFSMLLDSLNLLEPELTGPLKYSYDPLVNINLA 371 Query: 251 ---LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +DY + N + N D G LSDH +S + Sbjct: 372 GGDAAERERLDYLLYVDNGAIASSTAKIEVL-RNFDAAMWGGWDLSDHHAVSSTF 425 >gi|149920938|ref|ZP_01909399.1| hypothetical protein PPSIR1_13970 [Plesiocystis pacifica SIR-1] gi|149818210|gb|EDM77665.1| hypothetical protein PPSIR1_13970 [Plesiocystis pacifica SIR-1] Length = 276 Score = 82.7 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 36/293 (12%), Positives = 89/293 (30%), Gaps = 49/293 (16%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++R+V++N+ T + + + AD++ LQE+ + + Sbjct: 21 PSRLRVVTYNVL------------ADEVATAERIPAVFRVLREARADLIALQEV-APWFL 67 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 V ++ E ++ + + ++ L G A Sbjct: 68 PWVADTPWLREYFVAEIDGAPARP-------NGQFILSRFPVPHARALRLPG-------A 113 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + VE+ G + + + + + ++Q + + ++++ Sbjct: 114 QGRSLLVAHVELGGGERLAV---------GTTHMESLLEDGPVRARQLDAIFAALERERD 164 Query: 201 SLVP--FVIAGDFNRKINYLGNND-------DFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 + GD N + D D W + P + + E+ A Sbjct: 165 DPQVDATIFCGDLNFGDGERPDTDHLDPDFVDAWTALRPGEPGHTWDIERSDMARAGSFP 224 Query: 252 RNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D ++ ++++ S I RG SDH + + + Sbjct: 225 GEPSRRLDRVLVRGSSWR---PASIEIIGDEPVVPGQRGLFPSDHFGLVAELE 274 >gi|91227439|ref|ZP_01261803.1| extracellular nuclease-related protein [Vibrio alginolyticus 12G01] gi|91188589|gb|EAS74880.1| extracellular nuclease-related protein [Vibrio alginolyticus 12G01] Length = 984 Score = 82.7 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 39/381 (10%), Positives = 94/381 (24%), Gaps = 96/381 (25%) Query: 16 CTASVAQKVRLVSWNINTLSEQ--EGVSLWKNSVKRTTSDYT-------LLRQYAKNLDA 66 A +R+ S+N+ + R ++ + +DA Sbjct: 467 APAIADSDLRIASFNVLNYFNSVADSGHENPTGQNRGATNLDEFLIQQAKIVAAMNKMDA 526 Query: 67 DIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIHT 112 DI+ L E+ + +A+ + ++ + E+ + ++ I Sbjct: 527 DIIGLMEVENNGFGDGSAIQNLVDALNAEIDDAEDHYTYVEIEEQDKYQDEYFGSDAIMV 586 Query: 113 AIAVRKK--------NVRVLQQSY--------PLLGAKDSFSRAGNRRAVELLVEIN--G 154 AI R V + + + + R ++ + G Sbjct: 587 AILYRANAVTPKDAAKVIITPEQHIAENTITRKEGTESNPAYDKYQRHSLLQTFTVKETG 646 Query: 155 KKIWVLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++ H KS + + A + + + + K Sbjct: 647 EDLSIVVNHFKSKGSECIEEWIAGVEDSEPADLQGNCNNFRVSAAHAVGEALKEVKGD-- 704 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPN-------------DSLI 235 ++ GD N + TI Sbjct: 705 -VLLMGDLNAYGMEDPLLTLTDYSKEKYGRDIYTAAYTTIGDGELQVEKTKIEKGYGLHN 763 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 + + +D+ + + + ++ I E ++ + Sbjct: 764 LNTLLHGTDTFSYTYSGELGNLDHALASSSLAQKVVAIEDWHINSLESNLFEYSSKYTGD 823 Query: 292 ---------LSDHCPISIDYD 303 SDH P+ I D Sbjct: 824 MPKYKDAFSASDHDPVIIAID 844 >gi|229169798|ref|ZP_04297495.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621] gi|228613648|gb|EEK70776.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621] Length = 352 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 47/322 (14%), Positives = 108/322 (33%), Gaps = 64/322 (19%) Query: 21 AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++ ++NI G +S ++T + T + + +N ++D LQ Sbjct: 52 GNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLTNMLSFLQNENSDFTLLQ 111 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVRKK 119 E+ + + F N S + + ++ K Sbjct: 112 EVDIKS--HRSFDVNEHEFLKKGLPDYASSFGKNYDTKWVPVPVTKPMGNAEGGLSTFSK 169 Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176 + L G + R + R VE + +N GK + ++++HL + Sbjct: 170 YTVQTATRFQLPGMEPWPKRLFDLDRAIVEHKIPVNNGKYVRLVNVHLSA---------- 219 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 Y + QQA++LK+++ + ++ ++ GD+N+ ++ + +D + P + Sbjct: 220 YDEGGKIRKQQAEYLKEYMNECYQNGDYVILGGDWNQLLSNVQLSDPKFVKERPEWLVEL 279 Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280 D + ID F++ N ++ ++ + Sbjct: 280 PKDFADGGFQWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 337 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 SDH P+S + Sbjct: 338 EN----------SDHNPVSAVF 349 >gi|291403439|ref|XP_002718079.1| PREDICTED: APEX nuclease 1 [Oryctolagus cuniculus] Length = 318 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 73/311 (23%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + A +++ SWN++ L + K DI+ LQE Sbjct: 53 TSPSGKAATLKICSWNVDGLRAWIKKKG---------------LDWIKEEAPDILCLQET 97 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K + + S+ + ++ + + + + G Sbjct: 98 KCSE------NKLPAELQELPGLPHQYWSAPSDKEGYSGVGLLSRQCPLKVS----YGIG 147 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R V ++ ++ + + + L Sbjct: 148 EEEHDQEGRVIVA-----EFDAFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLTDSFR 254 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 A +DYF++ + L Sbjct: 255 HLYPDTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 306 --GSDHCPITL 314 >gi|189183086|ref|YP_001936871.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda] gi|189183300|ref|YP_001937085.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda] gi|189179857|dbj|BAG39637.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda] gi|189180071|dbj|BAG39851.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda] Length = 261 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 74/306 (24%), Gaps = 72/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++++WNIN LL++ + DI+ LQE K+ Sbjct: 1 MKIITWNIN----------------SIRIRIPLLQKLVHLYNPDIIALQE---TKVEDKL 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP L S + +A+ + + L + Sbjct: 42 FP------VTECINLGYKYITYSGQKSYNGVAILSRISFESTFAINLYNDEKR------- 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + IN ++ + + ++ S D + + ++ W K Sbjct: 89 -----HIAINIGELSIHNFYVPSG--GDIPDANVNIKFKHKLCYVDFMNAWFLNNKSKKD 141 Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N I D + Sbjct: 142 KIILLGDLNIAPLESDVWSSYQLRNVVSHTDIERKKLMHNITSFDWIDAVRFFSGKHEKL 201 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + + SDH P Sbjct: 202 YSWWSYRNVDWSKSDRGRRLDHIWISHHLESKIKSCIII-------KDARGWDMPSDHVP 254 Query: 298 ISIDYD 303 + ++ + Sbjct: 255 VMLEIE 260 >gi|37993819|gb|AAR06988.1| sphingomyelinase [Bacillus cereus] Length = 252 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 84/236 (35%), Gaps = 33/236 (13%) Query: 17 TASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 +++ A +++++ N+ LS L+ N + +D Y K + D+V Sbjct: 23 SSAQADTSTDQNNILKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVV 76 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKN 120 L E+ +A ++ T E S+ +A+ K Sbjct: 77 ILNEVLDNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKW 136 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 V + Y N+ V ++ N + + V+ HL++ DS+ SP+ Sbjct: 137 PIVEKVQYVFANGCGP-DNLSNKGFVYAKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA 192 Query: 181 CSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230 S+ + Q + ++D+I + + + GD N N +KT+ Sbjct: 193 -SVRTNQLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHA 247 >gi|325927981|ref|ZP_08189202.1| Exodeoxyribonuclease III [Xanthomonas perforans 91-118] gi|325541666|gb|EGD13187.1| Exodeoxyribonuclease III [Xanthomonas perforans 91-118] Length = 259 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ SWN+N+L+ L+Q+ D+V +QE + + Sbjct: 1 MKIASWNVNSLN----------------VRLPHLQQWLAAFAPDVVGIQETKLEDHKFPD 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + +A+ ++ V Q Sbjct: 45 AALAALGYRSVFC------------GQKTYNGVAILSRSPAVDVQ-----MGIPGLDDVQ 87 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + ++++++ + + + + Y + DWI Q+ + Sbjct: 88 QRVIAATV-----DGVRIINLYVVNGQDVGTDKYAYK------LRWLAAAHDWIAQELQR 136 Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPND-----------SLIRFPKEKDSRCN 246 V+ GDFN + +D + D L + + Sbjct: 137 YPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAALDKLLALGLHDAFRLHNQDAE 196 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID ++ ++ D +R SDH P Sbjct: 197 HFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGI-------DREPRTWERPSDHAP 249 Query: 298 ISIDY 302 + Sbjct: 250 AWVRL 254 >gi|257460806|ref|ZP_05625907.1| exodeoxyribonuclease III [Campylobacter gracilis RM3268] gi|257442137|gb|EEV17279.1| exodeoxyribonuclease III [Campylobacter gracilis RM3268] Length = 252 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 85/304 (27%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L G + + + D + LQE+ K Sbjct: 1 MKLISWNVNGLRAVLGKDGF---------------AWLAEQNPDFLGLQEI---KVSEKD 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 PK + + +S L + + ++ +A K ++ + Sbjct: 43 APKGLYELGFSQIDLNS-----AARAGYSGVASLAKFKSETSKALFFPDDEGR------- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +++ + + +I+ + ++ + A+ L + + Sbjct: 91 -----VLQHRFGDVVLFNIYFPNGQKDEARLAYKMEFYAKFLAYARSLAE-------QGL 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + GD N L + ++ + F +A Sbjct: 139 GVIFCGDVNTAHREIDLANPKANSKTSGFLPIERAWLDEVEAAGFVDTFRAVHGELRDAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + N L D SDHCP+ Sbjct: 199 SWWSYRFNARAKNVGWRIDYFFISANLRSQLK-----------DAFILSDVMGSDHCPVG 247 Query: 300 IDYD 303 I+ + Sbjct: 248 IEIE 251 >gi|162329924|pdb|2O3H|A Chain A, Crystal Structure Of The Human C65a Ape Length = 285 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +++ SWN++ L + K DI+ LQE Sbjct: 20 TSPSGKPATLKIASWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 64 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K+ + S + S+ + ++ + + + + G Sbjct: 65 KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 114 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D R V ++ ++ + + + L Sbjct: 115 DEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 167 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 168 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 221 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ + L Sbjct: 222 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 272 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 273 --GSDHCPITL 281 >gi|82702653|ref|YP_412219.1| endonuclease/exonuclease/phosphatase [Nitrosospira multiformis ATCC 25196] gi|82410718|gb|ABB74827.1| Endonuclease/exonuclease/phosphatase [Nitrosospira multiformis ATCC 25196] Length = 228 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 36/281 (12%), Positives = 76/281 (27%), Gaps = 55/281 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ L ++NI+ +G + + ++ADI+ LQE+ + + Sbjct: 2 QMTLATYNIHGCIGADGRFKPD-----------RIIDVLQEMNADIIALQEVEHHQV--E 48 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + I H A+ K + L Sbjct: 49 GYDLLDYFAVKTGFTAIA-GPTLVRRTHHYGNALLTKLPVLAVNRIDLT-----LPGREP 102 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R A+++ + N +++ V+ HL QQ + L + Sbjct: 103 RGALDVTLAWNDRRVHVVATHLGLRPS-------------ERRQQVRHLLKLFEIRL--T 147 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 +V+ GD N + C + + +D + Sbjct: 148 EIYVLMGDLNEWFLWGRPLRWLHAHFKR-----------PPHCATFPARKPFMALDRLWV 196 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + E S + SDH P+ + Sbjct: 197 HPRRRLKSL----------EAHSSSLARIASDHLPLKAIIE 227 >gi|254226796|ref|ZP_04920369.1| hypothetical protein VCV51_1756 [Vibrio cholerae V51] gi|125620689|gb|EAZ49050.1| hypothetical protein VCV51_1756 [Vibrio cholerae V51] Length = 869 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 48/373 (12%), Positives = 89/373 (23%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R ++ + LDADIV L E Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116 + + S R D I T + Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162 R K V++ Q + ++ + R + ++ G KI V Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVIDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652 Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211 H KS + + L Q + VI GD Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712 Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243 N D I + + K Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDSGAEIKHSYGYLNAVAMKHP 772 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290 + +D+ ++ + ++ + I E + Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 833 RASDHDPAVLELN 845 >gi|228472005|ref|ZP_04056773.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga gingivalis ATCC 33624] gi|228276617|gb|EEK15330.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga gingivalis ATCC 33624] Length = 347 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 44/322 (13%), Positives = 82/322 (25%), Gaps = 56/322 (17%) Query: 25 RLVSWNINTLSEQ-------EGVSLWKNSVKRTTSDY-----------TLLRQYAKNLDA 66 + +N+ L + + T+ Y + + Sbjct: 30 TVAFYNVENLFDTINDPKKFDDDRTPTGKDHWTSKHYYDHVNKLGQTIAKIGKDVTGQAP 89 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D V L E+ + V + Y N I A ++ + + Sbjct: 90 DFVGLAEVENREVVEDLVNSEALKDNYYGIVHYNSP---DARGIDVAFIYKQSVFKPTKT 146 Query: 127 SYPLLGAKDSFS-RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 S L KD+ R R + + E++G+++ + H S ++ + L Sbjct: 147 SKHFLDIKDAAGKRRYTRDQILISGEMDGEEVHFIVNHWPSRSGGEA-------ASRPLR 199 Query: 186 QQAQWLKDWITQKKESLVP---FVIAGDFNRKINYLGNNDDF-----WKTIDPNDSLIRF 237 + A L I ++ P + GDFN G K + D Sbjct: 200 EAAAALNKRIFDSLTAINPMAKVISMGDFNDDPTNSGFKKILKTKADKKKVQQGDLYNPM 259 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI-------------------QESFSEI 278 + D FV+ ++ Sbjct: 260 ENMYKKGIGTLAYRDSWSLFDQFVLTYGYLAKEAEGYKYWKAGVFNSPELANPSGKYAGY 319 Query: 279 LYNEDDIKSRGKRLSDHCPISI 300 Y S SDH P+ + Sbjct: 320 PYRSYANGSYTGGYSDHFPVYL 341 >gi|120437488|ref|YP_863174.1| endonuclease/exonuclease/phosphatase family protein [Gramella forsetii KT0803] gi|117579638|emb|CAL68107.1| endonuclease/exonuclease/phosphatase family protein [Gramella forsetii KT0803] Length = 352 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 38/344 (11%), Positives = 87/344 (25%), Gaps = 55/344 (15%) Query: 5 YVLALVFFLVPCTASVAQKV---RLVSWNINTLSEQEGVSLWKNSV-----------KRT 50 ++++ P + + + +N+ L + E + ++ Sbjct: 7 LLVSMYLLFQPIFSQEKKDYEIQTIAFYNVENLFDTEDDPDTFDDDRTANGKDAWNFEKY 66 Query: 51 TSDYTLLRQYAKNLD-------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103 + Q + I+ L E+ + + + ++ + Sbjct: 67 KQKIEHISQVLSEIGKEVTKTPPSIIGLCEIENKAVLEGLVSHPNLKDYHYGIVHYDSPD 126 Query: 104 RDSNNDIHTAIAVRKKNVRVLQ---QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 I A+ RK++ + + + L + + R R + + +N ++I + Sbjct: 127 E---RGIDVALLYRKEHFQPINSKARKLILYESDNPGKRDYTRDQLVVSGLLNKEEIHFI 183 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 H S ++ + L+++ + I + GDFN Sbjct: 184 VNHWPSRGGGEARSAYKREKAAYLNKRI--IDSLIK--INPEAKIISMGDFNDDPTNKSF 239 Query: 221 NDDFW-----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK------F 269 K + P D + + D M N Sbjct: 240 KKILNTKPTKKELLPTDLYNPMENMLKQGKGSLAYRDSWNLFDQMFMTGNLVLGNDTGFQ 299 Query: 270 LIQESFSEILYNEDDIKSRGKRLS-------------DHCPISI 300 Q Y S DH P+ I Sbjct: 300 FYQAGIFNKPYLITTAGQFRGYPSRTYGYSGYEGGYSDHFPVYI 343 >gi|254994979|ref|ZP_05277169.1| exodeoxyribonuclease III (xthA2) [Anaplasma marginale str. Mississippi] gi|255003123|ref|ZP_05278087.1| exodeoxyribonuclease III (xthA2) [Anaplasma marginale str. Puerto Rico] gi|255004249|ref|ZP_05279050.1| exodeoxyribonuclease III (xthA2) [Anaplasma marginale str. Virginia] Length = 284 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 81/313 (25%), Gaps = 76/313 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++WN+N L DI LQE + Sbjct: 10 IRILTWNVN----------------SVRKRVAHLCSVLTEHHVDIALLQETKCTDD---- 49 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV---------LQQSYPLLGAK 134 + + + +A+ K V ++ + Sbjct: 50 ------QFPLAELEDLGYKCYIHGQKSRNGVAILSKYPIVGELCNTVFDAEEEIGTVQDT 103 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 S+S R +E LV+ K+ V +++ + +D+ Y + + Sbjct: 104 GSYSVTEARY-LECLVDYQDVKVRVASVYVPNGQEVDTETFVYKLNFLRCLKARLLKLLA 162 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP----------------NDSLIRFP 238 VI GD+N + + D + +D + Sbjct: 163 REDW------LVIGGDYNVAPDDIDVYDA--QALDGKLCFHPKERAGLREILHLGFTDAF 214 Query: 239 KEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + ID+ ++ NA L++ S Sbjct: 215 RILHEGKQEFSWWNYREGSWQRNRGMRIDHLLLSPNAVDKLVECSI-------LSSVRGL 267 Query: 290 KRLSDHCPISIDY 302 + SDH P+ Sbjct: 268 ESPSDHAPVMCVL 280 >gi|302345223|ref|YP_003813576.1| exodeoxyribonuclease III [Prevotella melaninogenica ATCC 25845] gi|302150206|gb|ADK96468.1| exodeoxyribonuclease III [Prevotella melaninogenica ATCC 25845] Length = 249 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 83/302 (27%), Gaps = 77/302 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L G Q K+LDAD LQE A Sbjct: 1 MKFISWNVNGLRACVGKEFE---------------QQFKDLDADFFCLQETK-MQAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ ++ ++ A+ K+ + + D R Sbjct: 45 LSFPGYESYWN----------YADKKGYSGTAIYTKHKPLSVTYGIDIDEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + + ++ K + Sbjct: 91 -----VITLEMEDFYLVTVYTPN-------SQDGLRRLEYRMKWEDDFQAYL-HKLDEKK 137 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N + + + + + Sbjct: 138 PVIVCGDMNVAHQEIDLKNPKTNHKNAGFTDEEREKMTQLLSNGFIDTFRTLYPEQVTYS 197 Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + R + IDYF++ + L + SDHCP+ I Sbjct: 198 WWSYRFRAREKNTGWRIDYFLISERLKDRLEDAKIHTEI-----------MGSDHCPVEI 246 Query: 301 DY 302 Sbjct: 247 IL 248 >gi|297587792|ref|ZP_06946436.1| exodeoxyribonuclease III [Finegoldia magna ATCC 53516] gi|302380031|ref|ZP_07268510.1| exodeoxyribonuclease III [Finegoldia magna ACS-171-V-Col3] gi|297574481|gb|EFH93201.1| exodeoxyribonuclease III [Finegoldia magna ATCC 53516] gi|302312257|gb|EFK94259.1| exodeoxyribonuclease III [Finegoldia magna ACS-171-V-Col3] Length = 253 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 84/306 (27%), Gaps = 78/306 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 ++L+SWN+N + +L+ADI LQE+ N + Sbjct: 1 MKLISWNVNGYRAVWKKGFK---------------EAFDSLNADIFCLQEIKMKENQMTD 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + +N ++ V K + + D+ R Sbjct: 46 EMEIEGYHRY----------SYSANKAGYSGTLVYTKTEPIGVSFGIGIDEHDTEGR--- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 ++ + ++++++ + + L+D Sbjct: 93 ------VITCEYEDFFLVNVYTPNSKQKLERLDYRMVWEDEFHNYLNILRDR-------- 138 Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N N + + + + F + + Sbjct: 139 KPVIVCGDLNVAHNEIDLKNPQSNRRSAGFTDEERNKMSLLLNDGYIDTFRYFYPDKTDE 198 Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 IDYF++ + L+ + + SDHCP+ Sbjct: 199 YSYWSYFAKARERNAGWRIDYFIVSDDLKDNLVDAKIHQSI-----------MGSDHCPV 247 Query: 299 SIDYDF 304 ++ +F Sbjct: 248 ELEINF 253 >gi|257466522|ref|ZP_05630833.1| hypothetical protein FgonA2_03678 [Fusobacterium gonidiaformans ATCC 25563] gi|315917677|ref|ZP_07913917.1| DNAse I-like protein DHP2 [Fusobacterium gonidiaformans ATCC 25563] gi|313691552|gb|EFS28387.1| DNAse I-like protein DHP2 [Fusobacterium gonidiaformans ATCC 25563] Length = 274 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 91/303 (30%), Gaps = 42/303 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++ + L+F + + + + S+N+ L E D+ + + Sbjct: 1 MKFFYQCLLFLCLSIASFAQEAY-IASFNVLKLGESP-------------KDFETMAKTI 46 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRKKN 120 ++ D+V L+E+ + + ++ ++ + I+ + + A +K Sbjct: 47 EHF--DLVGLEEVITPEGLERLVKSLNKYTNHTWDYHISPFPVGTRKYKEYYAYVWKKDR 104 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 V L + + R +I + H Sbjct: 105 VTFLSSEGFYPDRE----KLFIREPYGANFQIGKFDFTFVLQHAVYGKSETER------- 153 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---RKINYLGNNDDFWKTIDPNDSLIRF 237 + Q + + + + +I GDFN + +D + I D I+ Sbjct: 154 -RAEAFQLVKVYRYFQDRNKKENDILIGGDFNLSAFDEAFSSLYEDKDQIIYGVDPRIKT 212 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ D + + + +S I + K ++SDH P Sbjct: 213 TIGMKKMANSY---------DNIFLSKKYTEEFTGKS-GAIDFTNRQYKVMRNKVSDHLP 262 Query: 298 ISI 300 + I Sbjct: 263 VFI 265 >gi|255320035|ref|ZP_05361231.1| exodeoxyribonuclease III [Acinetobacter radioresistens SK82] gi|262380541|ref|ZP_06073695.1| exodeoxyribonuclease III [Acinetobacter radioresistens SH164] gi|255302903|gb|EET82124.1| exodeoxyribonuclease III [Acinetobacter radioresistens SK82] gi|262297987|gb|EEY85902.1| exodeoxyribonuclease III [Acinetobacter radioresistens SH164] Length = 273 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 85/305 (27%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +R+VS N+N L L ++ + DAD++ +QE ++ Sbjct: 14 LRVVSINVNGLRSSVTKG---------------LLEWLEQSDADVICMQESRITHAQWTD 58 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 F W ++ A+ + + + DS R Sbjct: 59 KFKPEGWYTHLFPAERPGYA----------GTAIYSRLPFISVKDGLGFELADSQGRF-- 106 Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 V ++ G +++ ++L S D + + + + + Q +E Sbjct: 107 ---VTAEFDLGFGYPVYICSLYLPSGSSGD-------EAQARKDYFLEEYQKILKQWREE 156 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 +I GD+N + + + I + +E Sbjct: 157 GKSIIICGDYNIVHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDELGYVDTFREVRPEAE 216 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + + + + SDH P Sbjct: 217 LYSWWSNRGQARAKNVGWRIDYQACSPDWKNRTVNAWV-----------YKEQWFSDHAP 265 Query: 298 ISIDY 302 + IDY Sbjct: 266 VIIDY 270 >gi|313205315|ref|YP_004043972.1| endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes WB4] gi|312444631|gb|ADQ80987.1| Endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes WB4] Length = 369 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 50/309 (16%), Positives = 96/309 (31%), Gaps = 64/309 (20%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + + +L+S+N + + K T ++ + QYA + +ADI+ LQE Sbjct: 97 SETTSGTFKLLSYNT---------KMCGDLKKHTAENHNKVIQYAIDSNADIICLQEFTV 147 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + ++ F ++ ++ + +A K V +Q A ++ Sbjct: 148 SGSNEYLTMEDINKAFAKYPYKHIQFRQKNSKE--NGVATFSKFPIVSKQKINYPSAYNN 205 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE---------------------- 174 + + INGK + V++ HL+S + + Sbjct: 206 S--------ILSDININGKIVRVINNHLESNRLTEYDKAMPAKLKNNWDTNKLTRVTRHF 257 Query: 175 -NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 N + + + QA + I S ++ GDFN + Sbjct: 258 TNKLGSAFKIRAVQADTVAGVI---ANSPYKVIVCGDFNDVPSSYTYTKVKGSL------ 308 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 F + IDY D A Y+ D K+ S Sbjct: 309 KDAFAETGTGLGWTFNERYYHFRIDYVFFDPTA-------------YSIIDYKTDKVNYS 355 Query: 294 DHCPISIDY 302 DH P+ Sbjct: 356 DHYPVLCQI 364 >gi|262377172|ref|ZP_06070397.1| exodeoxyribonuclease III [Acinetobacter lwoffii SH145] gi|262307910|gb|EEY89048.1| exodeoxyribonuclease III [Acinetobacter lwoffii SH145] Length = 272 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 83/305 (27%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +R+VS N+N L L ++ + DAD++ +QE ++ Sbjct: 14 LRVVSINVNGLRSSVTKG---------------LLEWMEQSDADVICMQESRITHAQWTD 58 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 F W ++ A+ + V DS R Sbjct: 59 KFKPEGWYTHLFPAERPGYA----------GTAIYSRLPFVSLTDGLGFELADSQGRF-- 106 Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++ + + + ++L S D + + + + Q ++ Sbjct: 107 ---IAAEFDLGLDQTVQICSLYLPSGSSGD-------EAQARKDHFLEEYAKILKQWRDE 156 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD+N + + + I + +E Sbjct: 157 NKSVIVCGDYNIVHKRIDIKNWSGNQKASGCLPHERAWLDHIYDELGYVDTFREVRKEAE 216 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + + + + + SDH P Sbjct: 217 LYSWWSNRGQARAKNVGWRIDYHACSPDWKERTVNAWV-----------YKEQWFSDHAP 265 Query: 298 ISIDY 302 + IDY Sbjct: 266 VIIDY 270 >gi|257126763|ref|YP_003164877.1| endonuclease/exonuclease/phosphatase [Leptotrichia buccalis C-1013-b] gi|257050702|gb|ACV39886.1| Endonuclease/exonuclease/phosphatase [Leptotrichia buccalis C-1013-b] Length = 257 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 80/302 (26%), Gaps = 50/302 (16%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K +L+L+ + A++ +++++NI G L + Sbjct: 4 LKKILLSLIIMGTTVS--WAKEFKIMTYNIYGARLTNG---------------QKLGESI 46 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 K D V LQE+ + + + K + I+ + Sbjct: 47 KPYAPDFVSLQEVDKFTKRSNFKDITSDIAKELGYDYYYFQKSRDYDGGEYGISFISRYP 106 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 +Y L R+ + + VL ++ D Sbjct: 107 LEKIYTYELPSLG-----VEKRQILIAELAKKSFGKKVLIMNTHLDFKPDIKPEEMKS-- 159 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + IT+ + ++GD N N+ D K Sbjct: 160 ----------LEMITKFFKKDDLKFLSGDLNFLPTTTYYNEITKNWRDTYIEYNPDGKRT 209 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 S IDY Q+ + Y +D +LSDH P Sbjct: 210 LSDP----------RIDYIFGSQSKKWKVKNS------YFINDATQDWTKLSDHLPYMTI 253 Query: 302 YD 303 D Sbjct: 254 LD 255 >gi|124003256|ref|ZP_01688106.1| endonuclease/exonuclease/phosphatase family [Microscilla marina ATCC 23134] gi|123991354|gb|EAY30785.1| endonuclease/exonuclease/phosphatase family [Microscilla marina ATCC 23134] Length = 982 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 47/288 (16%), Positives = 98/288 (34%), Gaps = 44/288 (15%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++++S+N+ E + + R+ Y + Q+ +L+ADI+ LQE Sbjct: 131 QLKVISYNVL-CDEHDKEYV------RSKERYVAIAQHLAHLEADIIALQEATPLLIEFL 183 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 F+S + + K L + + Sbjct: 184 RQQAWAKDYFFSEPPNSPTLRPF-------GQVILSKYPFSLVEHLY----------SPQ 226 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +R + +ING+ V ++HL S + + QQ + + +++ + Sbjct: 227 KRFLVAGWQINGEAFHVANVHLTSNHSD--------KAMGVRQQQLEVMTNYLKSLRGD- 277 Query: 203 VPFVIAGDFNRKINYLGN------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 ++ GDFN + + +D W P+D+ F +++ Sbjct: 278 --VLLVGDFNMREGENVDILTEHQFEDVWPLQHPDDAGFSFHPDENPLAERFSRSGLPGR 335 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D + + ++L L+ + I R SDH + YDF Sbjct: 336 FDRMYLRSQSLQWL---PQHIKLFAKAPIAQDYLRASDHYGVFAVYDF 380 >gi|169630763|ref|YP_001704412.1| putative exodeoxyribonuclease [Mycobacterium abscessus ATCC 19977] gi|169242730|emb|CAM63758.1| Putative exodeoxyribonuclease [Mycobacterium abscessus] Length = 273 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 75/307 (24%), Gaps = 60/307 (19%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 AQK+ + + N+N + +N L + + +DIV LQE+ + Sbjct: 2 SAQKITVTTINVNGIRAAVKERSAENRG---------LLPWLEQTSSDIVCLQEVRAEED 52 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + S+ + + + + + + Sbjct: 53 QLREALAPALAAGWQV------VSAASSVKGRSGVGILSRVPAASTRVALDADGGEFDES 106 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 +E + V I+L + + + + + Sbjct: 107 GRY-------LEAEIGDLTVASIYLPTGEAGTARQEEKER-------FMAAVGARMAVLA 152 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKT---------------IDPNDSLIRFPKEKDSR 244 S VI GD+N + + F Sbjct: 153 ASGRDTVICGDWNIGHTERDIKAWKANQKKAGFLPEERAWVGSLLEAGWVDSFRLLHPDV 212 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + IDY + + + + + R SDH Sbjct: 213 DGPYSWWSWRGKAFDNDAGWRIDYHLATADLGRRA-------HSARVERADAYALRWSDH 265 Query: 296 CPISIDY 302 P++++Y Sbjct: 266 APVTVEY 272 >gi|228917707|ref|ZP_04081248.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228841944|gb|EEM87050.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 352 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 45/322 (13%), Positives = 108/322 (33%), Gaps = 60/322 (18%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T ++ + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMG----------SYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKK 119 LQE+ + + K P + + + ++ K Sbjct: 110 LQEVDIKSLRSFDVNGHEFLKKGLPNYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTFSK 169 Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176 + + L G + R + R VE + +N GK + ++++HL + Sbjct: 170 YTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---------- 219 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 Y + QQ ++LK ++ + E ++ GD+N+ ++ + +D + P+ + Sbjct: 220 YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPDWLVEL 279 Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280 D + ID F++ N ++ ++ + Sbjct: 280 PKDFTDGGFKWAVDSSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 337 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 SDH P+S + Sbjct: 338 EN----------SDHNPVSAVF 349 >gi|224367727|ref|YP_002601890.1| hypothetical protein HRM2_06120 [Desulfobacterium autotrophicum HRM2] gi|223690443|gb|ACN13726.1| conserved hypothetical protein [Desulfobacterium autotrophicum HRM2] Length = 251 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 42/287 (14%), Positives = 86/287 (29%), Gaps = 46/287 (16%) Query: 21 AQKVRLVSWNINTLSEQEG----VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 ++K R V +NI + ++ +RT + + + ++LD DIV L E+ Sbjct: 2 SKKYRFVLYNIRYGTGSGWRFHTPFPYRGYTRRTDRHFGSITDFIESLDPDIVGLIEVDG 61 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + ++ + + +T K V Q L Sbjct: 62 GSRRSRGVNQASQLA-------GVLGHSFLFESKYTRPLFSKHLPIVRWQGNAFLSKNGI 114 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 S+ + + ++ + L + Q + L+ I Sbjct: 115 LSQKFLYFDQGVKRLVMEVELDTCVVFLVHLS----------IKYAHRQNQLRELQVLIH 164 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 +K+ P ++AGDFN + + + P R + ++ Sbjct: 165 GQKK---PVIVAGDFNSFLG--------QRELAPFLEATSLKSANTGRLRTFPSRVPRME 213 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D+ + D+ RLSDH P+ D+ Sbjct: 214 LDFILHSPEII--------------IHDLDVPRVRLSDHLPLICDFS 246 >gi|126733500|ref|ZP_01749247.1| hypothetical protein RCCS2_05074 [Roseobacter sp. CCS2] gi|126716366|gb|EBA13230.1| hypothetical protein RCCS2_05074 [Roseobacter sp. CCS2] Length = 306 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 47/299 (15%), Positives = 91/299 (30%), Gaps = 39/299 (13%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 VP +R+ ++N++ + W L +DAD++ QE Sbjct: 31 VPLPEPDDNTLRVATYNVHYIILGRETGAWSVGDWERRKTPFNLA--FNAVDADVIGFQE 88 Query: 74 MGS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------ 125 M S + ++ W + + + + I R + +L Sbjct: 89 MESFGRGSGGRINLTLDWLLENNPDYAAAAVGDPAAFPSTQPILYRSDRLTLLDDGWFFF 148 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 P + +F+ + N G+ V+++H S S Sbjct: 149 SDTPDVIYSRTFNGSFPAFTSWAQFRDNTSGEIFRVINLHTDY------------ASRSN 196 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 Q + + D I + GDFN +I N K ++ F + S Sbjct: 197 RIQSIELVADRIAPWMADNETLFVIGDFNGRIGDTVVNILADKGLN-------FAPVQGS 249 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + N+ + ID+ + + Q + G+ +DH P+ DY Sbjct: 250 TFHFNRGINLFGAIDHI-ASTGNAQLIGQPIVLRRKF-------AGEWPTDHYPVIADY 300 >gi|121729036|ref|ZP_01682037.1| hypothetical protein VCV52_2576 [Vibrio cholerae V52] gi|121628684|gb|EAX61155.1| hypothetical protein VCV52_2576 [Vibrio cholerae V52] Length = 869 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 48/373 (12%), Positives = 89/373 (23%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R ++ + LDADIV L E Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116 + + S R D I T + Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVEIDSNGDGKTDAADSLGTDVITTGVIY 592 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162 R K V++ Q + ++ + R + ++ G KI V Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVIDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652 Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211 H KS + + L Q + VI GD Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712 Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243 N D I + + K Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDSGAEIKHSYGYLNAVAMKHP 772 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290 + +D+ ++ + ++ + I E + Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 833 RASDHDPAVLELN 845 >gi|294666217|ref|ZP_06731470.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292603990|gb|EFF47388.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 259 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ SWN+N+L+ L+Q+ D+V +QE + + Sbjct: 1 MKIASWNVNSLN----------------VRLPHLQQWLAAFAPDVVGIQETKLEDHKFPD 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + +A+ ++ V Q Sbjct: 45 AALAALGYRSVFC------------GQKTYNGVAILSRSPAVDVQ-----MGIPGLDDVQ 87 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + ++++++ + + + + Y + DWI Q+ + Sbjct: 88 QRVIAATV-----DGVRIINLYVVNGQDVGTDKYAYK------LRWLAAAHDWIAQELQR 136 Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPND-----------SLIRFPKEKDSRCN 246 V+ GDFN + +D + D L + + Sbjct: 137 YPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAALDKLLALGLHDAFRLHNQDAE 196 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID ++ ++ D +R SDH P Sbjct: 197 HFSWWDYRQAGFRRNLGLRIDLTLVSDTLRARAVESGI-------DREPRTWERPSDHAP 249 Query: 298 ISIDY 302 + Sbjct: 250 AWVRL 254 >gi|282859926|ref|ZP_06269014.1| endonuclease/exonuclease/phosphatase family protein [Prevotella bivia JCVIHMP010] gi|282587329|gb|EFB92546.1| endonuclease/exonuclease/phosphatase family protein [Prevotella bivia JCVIHMP010] Length = 384 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 37/289 (12%), Positives = 80/289 (27%), Gaps = 39/289 (13%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++++S+N+ + V + Y ADIV LQE A Sbjct: 117 GAIKILSYNVYLFDTWDDV----------EGKLNPIADYIIRSKADIVCLQEAKIETAKK 166 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK--NVRVLQQSYPLLGAKDSF-- 137 + +R++ + D N + + + + + + D Sbjct: 167 PNIMHTLRKHYKYIDRMVKRNSGDDNMVLLSKFPILSRDSIPYSSHSNMSVAYMLDVNGT 226 Query: 138 ------SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + + E + + K+ SL + + + Q + Sbjct: 227 KTLLVNNHFESYGLTEEEKTSFTEMVDGKVAVKKAKGKSVSLIDKLGKTMMRRAPQVDAV 286 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 ++ + + P ++ GDFN +D + + + + + Sbjct: 287 AAYVKKYLDKGTPVILCGDFNDTPISYS-HDVINGLLTDS-----YASSGNGLGFSYNKS 340 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ F D + SDH PIS Sbjct: 341 KMYFRIDHIFASSE---------FEPYGAKVDKSINN----SDHYPISC 376 >gi|262381739|ref|ZP_06074877.1| exodeoxyribonuclease III [Bacteroides sp. 2_1_33B] gi|262296916|gb|EEY84846.1| exodeoxyribonuclease III [Bacteroides sp. 2_1_33B] Length = 253 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 30/305 (9%), Positives = 85/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++++N N L G L ++ D++ +QE + + Sbjct: 1 MKIITYNTNGLRAAVGKGLP---------------EWLAQEQPDVLCIQETKLQPDQFPS 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F + + + + + + +A+ K + G Sbjct: 46 ETFEALGYKSYLFSAQKKGY----------SGVAILTKQEP----DHIEYGMGIEKYDNE 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + + ++ ++ S D ++ + + ++ + ++S Sbjct: 92 GRF-----LRADFGDVSIVSVYHPSGTSGDERQD-------FKMIWLEDFQKYVVELQKS 139 Query: 202 LVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ GD+N + + + + D + Sbjct: 140 RPNLILCGDYNICHEPIDIHDPIRNAKNSGFLPEEREWMTRFLSAGFTDTFRFLNPDKQE 199 Query: 246 NANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + R IDY ++ N + + SDHCP Sbjct: 200 YTWWSYRFNSRSKNKGWRIDYCMVSDNMKPKVKAAYILNDAVH-----------SDHCPA 248 Query: 299 SIDYD 303 ++ + Sbjct: 249 VLEIE 253 >gi|269119815|ref|YP_003307992.1| endonuclease/exonuclease/phosphatase [Sebaldella termitidis ATCC 33386] gi|268613693|gb|ACZ08061.1| Endonuclease/exonuclease/phosphatase [Sebaldella termitidis ATCC 33386] Length = 244 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 41/281 (14%), Positives = 83/281 (29%), Gaps = 50/281 (17%) Query: 29 WNINTLSE---QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 +NI + + + + + ++ + + K D+V L E+ + + Sbjct: 6 YNIRYGTGKYLHQPLKHIRGYLGKSVEQTDKIGDFLKKYKPDVVGLVEVDLGSYRTRRKN 65 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA---KDSFSRAGN 142 + +T ++ + K + +Q L + N Sbjct: 66 Q-------ATFLGKQLGHYGIYEHKYSQNSSLMKVPVLRRQGNAFLSGLQVEGQKFHYFN 118 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +L++E+ K + IHL +Q L + I Sbjct: 119 NGMKKLVIELETKDFSIFLIHLALG-------------AKTRLKQIVELYEVIDSC---T 162 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 PF+IAGDFN N ++ P + + K +D+ + Sbjct: 163 KPFIIAGDFNLFWGEEEIELFLRALNLKNANIKNIP--------TYPSWKPKKVLDFIIY 214 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + D RLSDH P+ +D++ Sbjct: 215 SEGIKI-------------NDFKVLTDVRLSDHLPLYVDFE 242 >gi|296219454|ref|XP_002755889.1| PREDICTED: deoxyribonuclease-1-like [Callithrix jacchus] Length = 282 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 37/285 (12%), Positives = 84/285 (29%), Gaps = 30/285 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AV 80 +++ ++NI T E + + + Q DI +QE+ + AV Sbjct: 22 SLKIAAFNIQTFGET---------KMSNATLVSYIVQILSRY--DIALVQEVRDSHLTAV 70 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K+ + +++ +N R V + Y G + + Sbjct: 71 GKLLDNLNQDAPDTYRYVVSEPLGRNNYKERYLFVYRPDRVSAVDSYYYDDGCEPCGNDT 130 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +R + ++ I D++ + L Q +W Sbjct: 131 FSREPAIVRFSSPFTEVREFAIVPLHAAPTDAVAEIDALYDVYLDVQEKW---------- 180 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 L ++ GDFN +Y+ + + + + + + D Sbjct: 181 GLEDIMLMGDFNAGCSYVRPSQWSSIRLRTSPIFQWLIPDTADTTAMSTHCAY----DRI 236 Query: 261 VMDQNAY-KFLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302 V+ ++ +S + S + +SDH P+ + Sbjct: 237 VVAGTLLQDSVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEVIL 281 >gi|325567278|ref|ZP_08143945.1| endonuclease/exonuclease/phosphatase [Enterococcus casseliflavus ATCC 12755] gi|325158711|gb|EGC70857.1| endonuclease/exonuclease/phosphatase [Enterococcus casseliflavus ATCC 12755] Length = 259 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 29/285 (10%), Positives = 72/285 (25%), Gaps = 35/285 (12%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+++ ++N+ V + + + D D++ +QE + A Sbjct: 2 KMKVATYNLR-------VDTDYDQEWQWHYRSEAVCSLIDYYDWDVLAIQEAR-PSQFAD 53 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + + A + L A + Sbjct: 54 LAKLAQYASVTAERDGDGLGEGIGLYYQKEAFELLASGSFWLS--LTPTEPSIHPEAAYS 111 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R V +++ +++ + + + L D I + Sbjct: 112 RLCVWAVLQEKKNPPFLVITT-------HLDNISEMARFEGMKVIFEQLADQIERY---- 160 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---LRNKIPIDY 259 P ++ GD N + + + + + + IDY Sbjct: 161 -PVLLMGDLNAEPTERVHRYLEQHFQNAKEHGQKPHHGPKGSYQNFIYTLPWQELEEIDY 219 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + F+ + + SDH P+ + F Sbjct: 220 IY----------TKGFTVVKTACLTDSCDRRFPSDHFPLEAEVQF 254 >gi|254494845|ref|ZP_01051882.2| endonuclease/exonuclease/phosphatase family protein [Polaribacter sp. MED152] gi|213690427|gb|EAQ41310.2| endonuclease/exonuclease/phosphatase family protein [Polaribacter sp. MED152] Length = 333 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 39/298 (13%), Positives = 93/298 (31%), Gaps = 65/298 (21%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 +S+ ++++S+N+ + + + + ++ + DI+ LQE + Sbjct: 90 SSLNSDLKIMSYNVRMFNHWQWIEEEGIPN--------KISEFVSAKEPDILLLQEFHN- 140 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDS---NNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 S N+ + N + + +A+ + + S L Sbjct: 141 ----------------SDNPSFNYPYKYIKLKNTNSNIGLAIYSNYKIINKGSLELTDTS 184 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL--------SQ 186 ++ + V I + ++HL+S EN + L + Sbjct: 185 NN--------IIFADVLKGKDTIRIYNLHLQSLELNAEAENFGQENSEKLLARLRAGFKK 236 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 QA+ ++++ + +++GDFN + I N Sbjct: 237 QAEQTEEFLLHEANWKGKKIVSGDFNNTA-----YSWVYNQISNNKKDAYIE--AGKGFG 289 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 N + ID+ + ++ + S ++ SDH PI ++ Sbjct: 290 KTYNYAFPLRIDFIL--------------TDENAIINQFTSFNEKNSDHFPIQARINW 333 >gi|254285815|ref|ZP_04960777.1| hypothetical protein A33_2558 [Vibrio cholerae AM-19226] gi|150423997|gb|EDN15936.1| hypothetical protein A33_2558 [Vibrio cholerae AM-19226] Length = 869 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 48/373 (12%), Positives = 89/373 (23%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R ++ + LDADIV L E Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116 + + S R D I T + Sbjct: 533 IENNGFGEGSAIAQLVNQINSQITDKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162 R K V++ Q + ++ + R + ++ G KI V Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652 Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211 H KS + + L Q + VI GD Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712 Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243 N D I + + K Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIADVEQFGDSGAEIKHSYGYLNAVAMKHP 772 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290 + +D+ ++ + ++ + I E + Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 833 RASDHDPAVLELN 845 >gi|86140857|ref|ZP_01059416.1| hypothetical protein MED217_16935 [Leeuwenhoekiella blandensis MED217] gi|85832799|gb|EAQ51248.1| hypothetical protein MED217_16935 [Leeuwenhoekiella blandensis MED217] Length = 330 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 35/325 (10%), Positives = 82/325 (25%), Gaps = 58/325 (17%) Query: 24 VRLVSWNINTLSEQ-------EGVSLWKNSVKRTTSDYT----LLRQYAKNLDAD----- 67 V + +N+ L + + + + T Y + + Sbjct: 9 VTVAFYNLENLFDTENDPITFDDDRTPEGKDRWTQEIYADKLLKMASVIAQIGPPEATTA 68 Query: 68 --IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 +V + E+ + + + + + I H I + K +V+ Sbjct: 69 PALVGVAEIENRKVLEDLVNQTPLK---QSHYGIVHYDSPDRRGIDVGLLYDPKLFQVVS 125 Query: 126 QSYP---LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 L + R R + + + G+++ +L H S ++L Sbjct: 126 SKVYELKLYDPERENRRIYTRDQLLVSGNLAGERMHILVNHWPSRSGGEALT-------R 178 Query: 183 LLSQQAQWLKDWITQKKESLVP---FVIAGDFNRKINYLGNNDDFW-----KTIDPNDSL 234 A L I S P + GD N + + + Sbjct: 179 PRRMAAAALNKRIIDSILSEEPYAKIISMGDLNDDPKDKSLKKILKTKARPEQVGLQEIY 238 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQ-------NAYKFLIQESFSEILYNEDDIKS 287 + + D ++ +++ F++ + Sbjct: 239 NPMERMAKRGQGTLAYRDSWNLFDQLLLSAAWLQRDYEHFQYYKAGIFNKRFLQTPEGPY 298 Query: 288 RGK------------RLSDHCPISI 300 +G SDH P+ + Sbjct: 299 KGYPFRSFANGKYTGGYSDHFPVYV 323 >gi|290993621|ref|XP_002679431.1| predicted protein [Naegleria gruberi] gi|284093048|gb|EFC46687.1| predicted protein [Naegleria gruberi] Length = 531 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 35/324 (10%), Positives = 75/324 (23%), Gaps = 55/324 (16%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GS 76 ++++S+NI+ + + + D++ QE+ Sbjct: 221 PKTTSLKIMSYNIHNYEGN------------WIKRLMKMIKVIERNQPDVICFQEVRLDE 268 Query: 77 YNAVAKVFPKNTWCI-----------------FYSTERLINHSKRDSN------NDIHTA 113 + K+ + + + S Sbjct: 269 KKDLKKLNNFHEFIFEDEYQLIHIKKALSQLGYIHYHSRPAMSYVQPFYMDVPPTMQEEG 328 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDS 172 +A+ K + Y LL S S R V + I DI + Sbjct: 329 LAIFSKYPIIEA-DYTLLYRDLSDSSTHQRICVRARILIPHMNSFITADIFNTHLSLKEH 387 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK------ 226 N + A + + V+ GDFN + ++ Sbjct: 388 ERNQNVLDINRF---ANLNVESSSSSSGKPTIQVVCGDFNLEPQEAAYSNMLIDGKWTDS 444 Query: 227 ----TIDPNDSLIRFPKEKDSRCNANKNLR-NKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + + + + K IDY + + +F Sbjct: 445 YISMRNSLSHTSKLLDEFTLANELTFSTNGDYKKRIDYILFRDFGSSIVNVSNFIIDGKA 504 Query: 282 EDDIKSRGKR--LSDHCPISIDYD 303 + SDH + ++ Sbjct: 505 SEYHYENDPYKAPSDHHAVVTEFT 528 >gi|167851455|ref|ZP_02476963.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei B7210] Length = 290 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 40/280 (14%), Positives = 74/280 (26%), Gaps = 56/280 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++R+ ++NI+ T S + L AD++ LQE+ A Sbjct: 4 ELRIATYNIHG-----------GLGAWTASAAERIAVVLDELCADVIALQEVPLGGARGA 52 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + T AV + + L SF Sbjct: 53 DV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----SFGNREP 104 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R A++ +E + V+ HL S + S Q L + Sbjct: 105 RGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LAAFDTRA 148 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 +P ++ GD N + F + + F + R +D + Sbjct: 149 LPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS--LDRIWV 197 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++L+ + DH P+ Sbjct: 198 HPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 227 >gi|254230072|ref|ZP_04923470.1| endonuclease/exonuclease/phosphatase family [Vibrio sp. Ex25] gi|151937406|gb|EDN56266.1| endonuclease/exonuclease/phosphatase family [Vibrio sp. Ex25] Length = 986 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 43/378 (11%), Positives = 94/378 (24%), Gaps = 94/378 (24%) Query: 15 PCTASVAQKVRLVSWNINTLSEQ--EGVSLWKNSVKRTTSDYT-------LLRQYAKNLD 65 A +R+ S+N+ + R ++ + +D Sbjct: 468 AAPAIADSDLRVASFNVLNYFTSVADSGHDNPTGQNRGATNLDEFLIQQAKIVSAMNKMD 527 Query: 66 ADIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIH 111 ADI+ L E+ + +A+ + ++ + E+ + ++ I Sbjct: 528 ADIIGLMEVENNGFGDGSAIQNLVDALNAEIDDVEDHYTYVEIEEQDKYQEEYFGSDAIM 587 Query: 112 TAIAVRKK--------NVRVLQQSY--------PLLGAKDSFSRAGNRRAVELLVEIN-- 153 AI R V V + + + R ++ + Sbjct: 588 VAILYRANAVTPKEAAKVIVTPEQHIAENTITRKEGTESNPAYDKYQRHSLLQTFTVKET 647 Query: 154 GKKIWVLDIHLKSFCFL----------DSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 G+ + V+ H KS DS +C+ A + K+ Sbjct: 648 GEDLSVVVNHFKSKGSECIEEWIAGVEDSEPADLQGNCNNFRVSAAKVVG--EALKDIDG 705 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPN-------------DSLI 235 ++ GD N + TI Sbjct: 706 DVLVMGDLNAYGKEDPLLTLTDYSQEKYGRDIYTAAYTTIGGGELQVEKTKIEKGYGLHN 765 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 + + +D+ + + + ++ I E ++ + Sbjct: 766 LNTLLHGADTFSYTYSGELGNLDHALASSSLAQKVVAIEDWHINSLESNLFEYSSKYTGD 825 Query: 292 ---------LSDHCPISI 300 SDH P+ I Sbjct: 826 MPKYKDAFSASDHDPVII 843 >gi|311744927|ref|ZP_07718712.1| endonuclease/exonuclease/phosphatase family protein [Algoriphagus sp. PR1] gi|126577434|gb|EAZ81654.1| endonuclease/exonuclease/phosphatase family protein [Algoriphagus sp. PR1] Length = 301 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 40/321 (12%), Positives = 98/321 (30%), Gaps = 48/321 (14%) Query: 2 IRKYVLALVFFL----VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 I K + + F L + + + ++++++NI + + ++ L Sbjct: 5 ISKTLFLIFFILGIQQIAYSQEAEKSLKVMTYNIWNGFDWG----------KDSARQENL 54 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW-CIFYSTERLINHSKRDSNNDIHTAIAV 116 Q+ K + D++ LQE+ +Y+ W + + + ++ I Sbjct: 55 IQWVKTQNPDVLALQELCAYDVDKLKKDAAKWGHPYVQILKEKGYPTALTSKKPINLIEK 114 Query: 117 RKK-------NVRVLQQSYPLLGAKDSFSRAGNRRAVEL--LVEINGKKIWVLDIHLKSF 167 +V+ + ++ S + R A ++ ++ +++ S+ Sbjct: 115 NVDNFWHGLLHVQTFGIDFYVVHLSPSDADTRLREAQQIKTRIQEQASDQYIILGDFNSY 174 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL----GNNDD 223 D+ ++++K + G+F+ D Sbjct: 175 SPFDAYWLESKSDLRTK----------MSEEKNEKYSNLRLGEFDYAPMSEFLSIPAIDV 224 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNAN--KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 +D +S + L N++ IDY + + Q Sbjct: 225 SLGKVDSEESYTFPTPALVGLYDQTAESILENRVRIDYILASPTLAQACSQVEIFNQGIP 284 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 E LSDH P+ + Sbjct: 285 E--------TLSDHYPMMAVF 297 >gi|262393047|ref|YP_003284901.1| putative extracellular nuclease [Vibrio sp. Ex25] gi|262336641|gb|ACY50436.1| predicted extracellular nuclease [Vibrio sp. Ex25] Length = 984 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 43/378 (11%), Positives = 94/378 (24%), Gaps = 94/378 (24%) Query: 15 PCTASVAQKVRLVSWNINTLSEQ--EGVSLWKNSVKRTTSDYT-------LLRQYAKNLD 65 A +R+ S+N+ + R ++ + +D Sbjct: 466 AAPAIADSDLRVASFNVLNYFTSVADSGHDNPTGQNRGATNLDEFLIQQAKIVSAMNKMD 525 Query: 66 ADIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIH 111 ADI+ L E+ + +A+ + ++ + E+ + ++ I Sbjct: 526 ADIIGLMEVENNGFGDGSAIQNLVDALNAEIDDVEDHYTYVEIEEQDKYQEEYFGSDAIM 585 Query: 112 TAIAVRKK--------NVRVLQQSY--------PLLGAKDSFSRAGNRRAVELLVEIN-- 153 AI R V V + + + R ++ + Sbjct: 586 VAILYRANAVTPKEAAKVIVTPEQHIAENTITRKEGTESNPAYDKYQRHSLLQTFTVKET 645 Query: 154 GKKIWVLDIHLKSFCFL----------DSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 G+ + V+ H KS DS +C+ A + K+ Sbjct: 646 GEDLSVVVNHFKSKGSECIEEWIAGVEDSEPADLQGNCNNFRVSAAKVVG--EALKDIDG 703 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPN-------------DSLI 235 ++ GD N + TI Sbjct: 704 DVLVMGDLNAYGKEDPLLTLTDYSQEKYGRDIYTAAYTTIGGGELQVEKTKIEKGYGLHN 763 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 + + +D+ + + + ++ I E ++ + Sbjct: 764 LNTLLHGADTFSYTYSGELGNLDHALASSSLAQKVVAIEDWHINSLESNLFEYSSKYTGD 823 Query: 292 ---------LSDHCPISI 300 SDH P+ I Sbjct: 824 MPKYKDAFSASDHDPVII 841 >gi|15599367|ref|NP_252861.1| nuclease [Pseudomonas aeruginosa PAO1] gi|107103689|ref|ZP_01367607.1| hypothetical protein PaerPA_01004760 [Pseudomonas aeruginosa PACS2] gi|218889499|ref|YP_002438363.1| putative nuclease [Pseudomonas aeruginosa LESB58] gi|254237052|ref|ZP_04930375.1| hypothetical protein PACG_03084 [Pseudomonas aeruginosa C3719] gi|254242856|ref|ZP_04936178.1| hypothetical protein PA2G_03623 [Pseudomonas aeruginosa 2192] gi|9950380|gb|AAG07559.1|AE004833_10 probable nuclease [Pseudomonas aeruginosa PAO1] gi|126168983|gb|EAZ54494.1| hypothetical protein PACG_03084 [Pseudomonas aeruginosa C3719] gi|126196234|gb|EAZ60297.1| hypothetical protein PA2G_03623 [Pseudomonas aeruginosa 2192] gi|218769722|emb|CAW25482.1| probable nuclease [Pseudomonas aeruginosa LESB58] Length = 266 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 82/304 (26%), Gaps = 70/304 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++ ++N+N + L + + DIV LQE+ + +A Sbjct: 2 DTLKIATFNVNG----------------IQTRLAALLAWLEREAPDIVCLQELKTPDA-- 43 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +A+ ++ + L+ L G Sbjct: 44 --------RFPAAALEKAGYGAIWQGQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRY 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 AV + V ++L + + Y + + L + ES Sbjct: 96 LEAAV--------DGLLVASLYLPNGNPQPGPKFDYKLA------WFEHLIRHAAELMES 141 Query: 202 LVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCN 246 P V+AGDFN + D + ++ + + + R Sbjct: 142 GHPVVLAGDFNVVPSDFDIYDTRSWKKDALLQPESRECFERLLRQGWVDALRQRFPDRRL 201 Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ + L D + SDH P Sbjct: 202 YTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDAGV-------DRWVRGEEHASDHAPA 254 Query: 299 SIDY 302 + Sbjct: 255 WVSL 258 >gi|167756678|ref|ZP_02428805.1| hypothetical protein CLORAM_02216 [Clostridium ramosum DSM 1402] gi|167702853|gb|EDS17432.1| hypothetical protein CLORAM_02216 [Clostridium ramosum DSM 1402] Length = 251 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 78/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N + + K ADI +QE ++ Sbjct: 1 MKLVSWNVNGIRACITKGFY---------------DVLKESKADIFCVQETKMQEGQIEL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S E ++ V K + + D R Sbjct: 46 EKHGYYTYMNSAE-----------KKGYSGTLVFSKEKPLNYSYGIGIEEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + +K ++++ + + ++ ++S Sbjct: 91 -----VVTLEYEKFYLVNCYTPN-------SQNELKRLDYRMHWEDDFLAYLKSLEKSK- 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + N + + + Sbjct: 138 PVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAKMTNLLENGFIDTYRYLYPDQEGVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ + + + + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFIVSDCLKEGIKEAFICTDIL-----------GSDHCPVG 246 Query: 300 IDYD 303 ++ D Sbjct: 247 LEID 250 >gi|83951017|ref|ZP_00959750.1| hypothetical protein ISM_07945 [Roseovarius nubinhibens ISM] gi|83838916|gb|EAP78212.1| hypothetical protein ISM_07945 [Roseovarius nubinhibens ISM] Length = 341 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 41/336 (12%), Positives = 88/336 (26%), Gaps = 52/336 (15%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + A +RL +WN+ G+ L R + + + + DI+ LQ + Sbjct: 8 AGADTLRLATWNVELSRAGPGILLRDLR--RGDAQADAVAEIIADHAPDILLLQGVDHDA 65 Query: 79 ------AVAKVFPKNTWCIFYSTERLINHS---KRDSNNDIHTA---------------- 113 A+ + + + Y N D + D Sbjct: 66 DHLALLALQSRIAQAGYSLPYRYAPPPNSGLASGHDLDGDGRLGEPEDAQGFGRFRGEGG 125 Query: 114 IAVRKKNVRVLQQSY---------PLLGAKDSFSRAGNRRAVE-----------LLVEIN 153 +A+ + Q L +D+ + + + V Sbjct: 126 MALLSRYPIAAAQDLSGFLWVDLPHALLFEDTGAPLFPAAVLRDLRLASVAQWRVEVTAP 185 Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES--LVPFVIAGDF 211 +I + H F + + L L + FV+ GD Sbjct: 186 QGRITLFAFHAGPPVFDGPEDRNGRRNHDQLMFWQHVLAGELDGGLGPMPEGRFVLMGDA 245 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC--NANKNLRN-KIPIDYFVMDQNAYK 268 N+ +T+ + L + + +DY + ++ Sbjct: 246 NQDPQRGEGRKAAIRTLLGDPRLQDPRPSHGDGTEMTTVHWPQTGPMRVDYILPSRDWEV 305 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + N +R + S H + +D + Sbjct: 306 AASGVHWPKTGPNTGPEAARAEAASRHRLVWVDLTW 341 >gi|260788648|ref|XP_002589361.1| hypothetical protein BRAFLDRAFT_218091 [Branchiostoma floridae] gi|229274538|gb|EEN45372.1| hypothetical protein BRAFLDRAFT_218091 [Branchiostoma floridae] Length = 275 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 31/267 (11%), Positives = 68/267 (25%), Gaps = 30/267 (11%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 + + + + D+V LQE+ S ++ + ++ + + Sbjct: 23 PARFQAIGEELCTGRYDVVSLQEVWSQYVYEEMVS--------QVQDVLPYHHYFYSGWH 74 Query: 111 HTAIAVRKKNVRVLQQSYPL-----LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 + + V + + + G + A V G +I + H Sbjct: 75 GSGLCVFSRYPIIGSHQHRFTLNGFPHKPHHPDWYGGKMAGLCQVRHPGAEINIYVTHTH 134 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI---------N 216 + + QA L +I + ++AGD N + + Sbjct: 135 -----TEYNHENDKDKAHRVSQAFELSQFIRHTGQCADVNILAGDLNNQPFELGLKIIQS 189 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 G D + N D DY + +A + Sbjct: 190 NTGMEDAWLTAEHRNAEDSGLTWNLDDNNFTCYPDYPPCRYDYVLYKGSARCRVKCVHCE 249 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ SDH + + Sbjct: 250 TTMHKVPGKP---FNYSDHEGVVAHLE 273 >gi|254460243|ref|ZP_05073659.1| exodeoxyribonuclease III [Rhodobacterales bacterium HTCC2083] gi|206676832|gb|EDZ41319.1| exodeoxyribonuclease III [Rhodobacteraceae bacterium HTCC2083] Length = 262 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 31/306 (10%), Positives = 67/306 (21%), Gaps = 71/306 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L +WNIN ++ + + D++ LQE S + Sbjct: 2 SFTLATWNIN----------------SVRLREPIVCKLLQEEAPDVLCLQECKSPV---E 42 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + P + T + +A+ K + + AG Sbjct: 43 LIPTEAFAALGYTHM------VARGQKGYNGVAILSKLPIKEVGAEDFAQLGHARHIAGQ 96 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + V + ++ + D + + ++DW Sbjct: 97 LE----------NGVIVHNFYVPAG--GDVPDREKNEKFGQKLDYLTEMRDWFKTNSPRK 144 Query: 203 VPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N D + + S Sbjct: 145 S--ILVGDLNIAPREDDVWDHKKLLKIVSHTPIEVEHLDDVMKAGDWHDVTRADISEGKL 202 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + ++ SDH P Sbjct: 203 YSWWSYRAKDWDAANKGRRLDHVWATGDIASAAHSS-------RVLRDARGWEKPSDHAP 255 Query: 298 ISIDYD 303 + +D Sbjct: 256 VFATFD 261 >gi|302534940|ref|ZP_07287282.1| exodeoxyribonuclease III [Streptomyces sp. C] gi|302443835|gb|EFL15651.1| exodeoxyribonuclease III [Streptomyces sp. C] Length = 267 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 34/273 (12%), Positives = 72/273 (26%), Gaps = 56/273 (20%) Query: 58 RQYAKNLDADIVFLQEMGSYNA--VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 ++ DAD+V LQE+ + A A+ W ++ + +A Sbjct: 21 VEWLAGSDADVVCLQEVRAEEAQIPAEAREPEGWHTVFAPAAVKG----------RAGVA 70 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + + + D+ R + V++ G + V ++L S + ++ Sbjct: 71 LYTRREPERVRVGFGSDEFDASGR-------YIEVDLPG--VTVASLYLPSGEAGTAKQD 121 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LG 219 LK V+ GD+N Sbjct: 122 EKYRFMEEFLGYLGELKARA---AADGREVVVCGDWNICHQEADLKNWKTNRKNAGFLPE 178 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFL 270 + K + + ID V Sbjct: 179 EREWLGKVYAEAGYVDVVRGLHPDTEGPYSWWSYRGRAFDNDAGWRIDLQVASPGLAAKA 238 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + ++ +R SDH P+++ Y+ Sbjct: 239 VKAFV-------ERAETHPERWSDHAPVTVVYE 264 >gi|317501545|ref|ZP_07959741.1| exodeoxyribonuclease III Xth [Lachnospiraceae bacterium 8_1_57FAA] gi|331088593|ref|ZP_08337504.1| exodeoxyribonuclease [Lachnospiraceae bacterium 3_1_46FAA] gi|316897056|gb|EFV19131.1| exodeoxyribonuclease III Xth [Lachnospiraceae bacterium 8_1_57FAA] gi|330407550|gb|EGG87050.1| exodeoxyribonuclease [Lachnospiraceae bacterium 3_1_46FAA] Length = 250 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 75/304 (24%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VSWN+N + + DADI +QE Sbjct: 1 MKFVSWNVNGIRACVQKGF---------------LDFFTEADADIFCIQESKMQEG-QLE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ AV K + + D R Sbjct: 45 LDLPGYHQYWN----------YAVKKGYSGTAVFTKKEPLSVTYGIGIEEHDQEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + + ++ + + + + L++ Sbjct: 91 -----VITCEFEDFYFVTVYTPNSQNELARLDYRMRWEDDFRMYLKKLEE--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + F R Sbjct: 138 PVIVTGDMNVAHKEIDLKNPKTNRKNAGFTDEERGKFTELLDAGFIDTFRYFYPDREGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + ++ + L SDHCPI Sbjct: 198 SWWSYRFSARAKNAGWRIDYFCVSESLKERLKDAKILT-----------DVMGSDHCPIE 246 Query: 300 IDYD 303 +D D Sbjct: 247 LDMD 250 >gi|260494509|ref|ZP_05814639.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33] gi|260197671|gb|EEW95188.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33] Length = 278 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 53/306 (17%), Positives = 98/306 (32%), Gaps = 37/306 (12%) Query: 1 MIRKYVLALVF--FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 M R +L+++F F + T S+A + + S+NI L D Sbjct: 1 MKRGKLLSIIFALFFILSTLSLADEAYIASFNILRLGA-------------AKKDIVQTA 47 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVR 117 + K DIV L E+ + N V ++ + + I+ S+ + A + Sbjct: 48 KILKGF--DIVGLVEVINRNGVEELVDELNKQSDEKWDYHISPFGVGSSKYKEYFAYIYK 105 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 K V+ ++ K S R +I + +H Sbjct: 106 KDKVKFIKSEGFYKNGKSSL----LREPYGATFQIGNFDFTFVLVHTIYG--------NN 153 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + + + ++ + E +IAGDFN + +K D I Sbjct: 154 ESQRKAENYKMVDVYNYFQDRDEKENDILIAGDFNL-YALDESFRPLYKHADKITYAIDP 212 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + N D F Q + S + ++ D+ K + +SDH P Sbjct: 213 AIKTTIGAKGRANSY-----DNFFFSQKYSQEFTGSS-GALDFSGDNPKLMREIVSDHIP 266 Query: 298 ISIDYD 303 + I + Sbjct: 267 VFIVVE 272 >gi|254516326|ref|ZP_05128385.1| endonuclease/exonuclease/phosphatase family protein [gamma proteobacterium NOR5-3] gi|219674749|gb|EED31116.1| endonuclease/exonuclease/phosphatase family protein [gamma proteobacterium NOR5-3] Length = 312 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 32/282 (11%), Positives = 87/282 (30%), Gaps = 35/282 (12%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++++ NI ++ S RT + + ++ ++V LQE + + Sbjct: 37 TIKVMTLNIAH-GRNSALNQLFVSKARTFENLDYIAALLADIAPNVVALQEADGRSRWSG 95 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 F T+ S + H + + A+ + + S + S + Sbjct: 96 NFDHVTYIAEKSGLPCVVHGLHSRSWISNYGTALLSRGKPIASSSVSFSPSWPSKQKGFV 155 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 ++ V+ + ++ +H + + + + + Q + Sbjct: 156 TTTIDWPVDQQRIPVTLVSVHF---------------DFLRKKVRDRQVSEMVAQLVDID 200 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 P V+ GD N + ++ +D D P++ + +D+ ++ Sbjct: 201 GPLVLMGDLNSHWSQKSSH--VRSLVDELDLQAFSPEKNGLGTYKKTTGK---RLDWILI 255 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 Q E++ + DH + + + Sbjct: 256 SQELA----FEAYEVLPDIVA----------DHLAVVAEISY 283 >gi|159124775|gb|EDP49893.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus fumigatus A1163] Length = 439 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 100/313 (31%), Gaps = 34/313 (10%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +R + L L +P A+ A + +++ N+ L + + + + Sbjct: 1 MRSFHLVLAA-GIPALAATAGEFNILALNVAGLPPILNGNDVPGDKSDNSR---QIGRKF 56 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 D++ +QE +Y+A + R + ++T + Sbjct: 57 AEYGYDVIHVQEDFNYHA-------YIYETDNHPYRTPTSGGAGIGSGLNT--LSNFEFT 107 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPS 180 ++ + + + + V ++ G + ++H + D Sbjct: 108 NFVRTKWATCSNAEGADCLTPKGFTSMRVRVDEGVYVDFYNLHADAGSKDDD-------- 159 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFP 238 S Q L D+I + ++ GD N + G+N ++T + N + Sbjct: 160 VKARSANLQQLADYIK-VNSAGNAVLVFGDTNARYTRTGDNIRVFQTQNGMVNPWVELIL 218 Query: 239 KEKDSRCNAN-------KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + +N + +D + L ++ + + +G Sbjct: 219 QGAAPAEGSNALLCQNPSTTNDCETVDKIFYRGSRAVDLRAVFWN--YESNKFLSDKGTI 276 Query: 292 LSDHCPISIDYDF 304 LSDH PI+ ++ + Sbjct: 277 LSDHNPITTNFTW 289 >gi|42784261|ref|NP_981508.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus ATCC 10987] gi|42740192|gb|AAS44116.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus ATCC 10987] Length = 327 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 109/324 (33%), Gaps = 64/324 (19%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T + + + +N ++D Sbjct: 25 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 84 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117 LQE+ + + F N + S + + ++ Sbjct: 85 LQEVDIKSM--RSFDVNGHEFLKNGLPDYASSFGKNYDTKWVPVPITSPMGYAEAGLSTF 142 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLE 174 K + + L G + R + R VE + + NGK + ++++HL + Sbjct: 143 SKYKVQTAERFQLPGMEPWPKRLFDLDRAIVEHKIPVSNGKFVRLVNLHLSA-------- 194 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 Y + QQ ++LK+++ + ++ ++ GD+N+ ++ + +D + P + Sbjct: 195 --YDEGGKIRKQQVEFLKEYMNKHYKNGDYVIMGGDWNQLLSNVQLSDPKFVKERPEWLV 252 Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278 D + ID F++ N ++ ++ Sbjct: 253 ELPKDFTDGGFKWAVDSSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 310 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P+S + Sbjct: 311 KFEN----------SDHNPVSAVF 324 >gi|326476302|gb|EGE00312.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Trichophyton tonsurans CBS 112818] Length = 707 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 40/363 (11%), Positives = 96/363 (26%), Gaps = 84/363 (23%) Query: 22 QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 K ++++N + + + + LL + DADIV LQE+ + Sbjct: 322 DKFTVLTYNTLCDRYATHQQYGYAPSKALAWELRRDLLLSEIRGQDADIVCLQEVDQGSY 381 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL--- 131 + + + ++ S + K + + + Sbjct: 382 HGFFREQLAYNDYKGVYWPKGRAQGMSEEEAKVVDGCATFFKGSKYILLEKAMIHFGQTA 441 Query: 132 -------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 G D ++R + + ++V ++G++I V++ + + ++ Sbjct: 442 VRRPDAKGQDDIYNRLWQKDNIAVVVYLENRMSGERIIVVN---AHIYWDPAYKDVKLVQ 498 Query: 181 CSLLSQQAQWLKD---------------------------------------WITQKKES 201 +++ ++ L + I S Sbjct: 499 SAIMMEEVTQLAEKFIKIPPCTDKTAFRFSEPEDETNNGENTSPPTPVEPSPSIEYSSPS 558 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC- 245 +P ++ GDFN + + D + + F + Sbjct: 559 QIPILVCGDFNSRPSSAVYNLLAHGRLEEEHPDLRDRLYGNLTRQGMTHPFTLKSAYSAI 618 Query: 246 ----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISI 300 N IDY N + + Y + SDH + Sbjct: 619 GELSFTNYTPGFTDVIDYIWYSSNLLQVTGLLGEVDKEYLQRVPGFPNYHFPSDHLALMA 678 Query: 301 DYD 303 ++ Sbjct: 679 EFS 681 >gi|225024152|ref|ZP_03713344.1| hypothetical protein EIKCOROL_01020 [Eikenella corrodens ATCC 23834] gi|224943177|gb|EEG24386.1| hypothetical protein EIKCOROL_01020 [Eikenella corrodens ATCC 23834] Length = 251 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 39/290 (13%), Positives = 92/290 (31%), Gaps = 50/290 (17%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++ V + ++NI+ S + ++LD DI+FLQE+ + Sbjct: 2 SRAVSITTYNIH----------KGMSPLNRRLQLPQMVDALQHLDTDILFLQEVQGVH-H 50 Query: 81 AKVFPKNTWCIFYSTERLI-------NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + E + ++ + + H A+ + ++ + + Sbjct: 51 KRQQNVPEFPAEPHGEVIGRQLAFACSYGQNATYAGRHHGNAILSRLPLQMRTNLNV--- 107 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 S +R R + ++ G ++ + + +Q + + D Sbjct: 108 --SVNRLEQRGVLHCEIQPPGWDRPLICLCVHLNLREAD-----------RKRQYRTIAD 154 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 +I + S P ++AGDFN + F + + ++ F R Sbjct: 155 YIEHQIPSDAPLILAGDFNDWRQRSCSR--FGQLLGLDE---AFAHLSAGRPKTFPARMP 209 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +D + + ++LSDH P+S + Sbjct: 210 ILSLDRIYTRH----------LTVLNAVSHQGLP-WQQLSDHLPLSAVVE 248 >gi|163745437|ref|ZP_02152797.1| exodeoxyribonuclease III [Oceanibulbus indolifex HEL-45] gi|161382255|gb|EDQ06664.1| exodeoxyribonuclease III [Oceanibulbus indolifex HEL-45] Length = 262 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 33/306 (10%), Positives = 68/306 (22%), Gaps = 71/306 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L +WNIN L+ + D++ LQE S Sbjct: 2 SFSLATWNIN----------------SVRLREPLVLKLLAEHGPDVLCLQECKSPVDK-- 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + +A+ K + + Sbjct: 44 -------IPVEAFQAAGYTHMVARGQKGYNGVAILSKLPLLDAGDQDFAMLGHARH---- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V +E NG I + D + + ++DW K Sbjct: 93 ---VAAKLE-NGTTIH----NFYVPAGGDKPDREINEKFGQKLDYLSEMRDWFHSDKPEK 144 Query: 203 VPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N D + + + + ++ N Sbjct: 145 S--ILVGDLNIAPREDDVWDHKKLLKIVSHTPVEVEALGAVQDAGNWVDITRQDVPTGNL 202 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + ++ SDH P Sbjct: 203 YSWWSYRAADWDAADKGRRLDHIWATADIAQAGHSSHIV-------RDARGWEKPSDHAP 255 Query: 298 ISIDYD 303 + +D Sbjct: 256 VFASFD 261 >gi|153815015|ref|ZP_01967683.1| hypothetical protein RUMTOR_01232 [Ruminococcus torques ATCC 27756] gi|145847583|gb|EDK24501.1| hypothetical protein RUMTOR_01232 [Ruminococcus torques ATCC 27756] Length = 252 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 75/304 (24%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VSWN+N + + DADI +QE Sbjct: 3 MKFVSWNVNGIRACVQKGF---------------LDFFTEADADIFCIQESKMQEG-QLE 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ AV K + + D R Sbjct: 47 LDLPGYHQYWN----------YAVKKGYSGTAVFTKKEPLSVTYGIGIEEHDQEGR---- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + + ++ + + + + L++ Sbjct: 93 -----VITCEFEDFYFVTVYTPNSQNELARLDYRMRWEDDFRMYLKKLEE--------KK 139 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + F R Sbjct: 140 PVIVTGDMNVAHKEIDLKNPKTNRKNAGFTDEERGKFTELLDAGFIDTFRYFYPDREGIY 199 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + ++ + L SDHCPI Sbjct: 200 SWWSYRFSARAKNAGWRIDYFCVSESLKERLKDAKILT-----------DVMGSDHCPIE 248 Query: 300 IDYD 303 +D D Sbjct: 249 LDMD 252 >gi|114332258|ref|YP_748480.1| endonuclease/exonuclease/phosphatase [Nitrosomonas eutropha C91] gi|114309272|gb|ABI60515.1| Endonuclease/exonuclease/phosphatase [Nitrosomonas eutropha C91] Length = 253 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 46/289 (15%), Positives = 89/289 (30%), Gaps = 48/289 (16%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + + + ++NI+ S LR Y ++L+ DI+FLQE+ + Sbjct: 4 SNRTLHIATYNIH----------KGLSFFNQRVVLHELRDYLRSLNVDIIFLQEVIGEHT 53 Query: 80 VA----KVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + +PK+ F + + K N H A+ + + Sbjct: 54 LHASRFQDWPKDAQYEFLADAVWSDFAYGKNAVYNHGHHGNAILSRFPISSWE-----NE 108 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 S R +R + + I G K + I + F +Q + ++ Sbjct: 109 DISAHRFESRGLLHCELAIPGWKDALHCICVHLGLFK-----------RGRYRQLEAIER 157 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 I Q P V+AGDFN N ++ + + + ++ Sbjct: 158 RIRQLVPPDAPLVLAGDFNDWRGVA--NQALASRLNLVEVFQYTQGKA---ARSFPSVLP 212 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + F R+SDH +S Sbjct: 213 LLRLDRIYIRG----------FQVKNARI-FHNRPWSRISDHAALSAQI 250 >gi|307151701|ref|YP_003887085.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7822] gi|306981929|gb|ADN13810.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7822] Length = 262 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 34/290 (11%), Positives = 76/290 (26%), Gaps = 45/290 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+ + + D++ QE ++ + Sbjct: 3 LKIITFNLRY-------DKPDPAQNNWRVRRAAIASLLNYYSPDLMGTQEGKAHQLLDLH 55 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN--------VRVLQQSYPLLGAKD 135 + + + + H AI ++ + + Sbjct: 56 RMLPEYQSV-------GGDRTGTGTNEHCAIFYHRRRLKCLETGDFFLSETPEIPGSITA 108 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 S+ R + E + ++ + S + A+ + + + Sbjct: 109 SWGNPHPRMVTWAVFEGIDEAKKIVFYNTHLDY----------RSATARELGAKLITERL 158 Query: 196 TQKKESLVPFVIAGDFNRKINYLGN---NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 +Q + + DFN L I D+L P EK N + Sbjct: 159 SQLDLTDSYLFVTADFNATPGSLPRTTFERPLSNGIKLYDALAEIPLEKQLSFNNF-TEQ 217 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID D + D K G SDH P+ ++ Sbjct: 218 PTDAIDTIYYDSRS---------RLQQAKVDQQKWEGLIPSDHFPVIGEF 258 >gi|168214660|ref|ZP_02640285.1| exodeoxyribonuclease III [Clostridium perfringens CPE str. F4969] gi|170713849|gb|EDT26031.1| exodeoxyribonuclease III [Clostridium perfringens CPE str. F4969] Length = 250 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 39/299 (13%), Positives = 75/299 (25%), Gaps = 78/299 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L Y K+ DADI LQE Sbjct: 1 MKLISWNVNGLRACVKKGF---------------LDYFKSEDADIFCLQETKLQEG-QID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + G R Sbjct: 45 LDLEGYFQYWNYAEKKGY----------SGTAIFTKKEPLNV----YYGINMEHHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + L S Sbjct: 91 -----VITLEFEDFFMVTVYTPNSQSELARLEYRMEWEDDFRNYLLEL--------SSKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GD N D + T+ + + F Sbjct: 138 GVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDKFSTLLSSGFIDTFRYFNPDLEGVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF++ N + + S + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEASIDTEIL-----------GSDHCPV 245 >gi|104773315|ref|YP_618295.1| exodeoxyribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116513293|ref|YP_812199.1| exonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103422396|emb|CAI96933.1| Exodeoxyribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116092608|gb|ABJ57761.1| Exonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325124912|gb|ADY84242.1| Exodeoxyribonuclease A [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 275 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 85/303 (28%), Gaps = 56/303 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL+SWNI++L+ + + + R + + +LD D++ LQE + Sbjct: 1 MRLISWNIDSLNAALTGTSPRAEMTRG------VLKNLHDLDPDVLALQETKLPASGPSK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + S + + K + P +GA + G Sbjct: 55 KHQAALADLFPEYDFVWRSSMEPARKGYAGTMFLYKKGLEPVVTRPEIGAPEPMDFEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V ++ + + L + Sbjct: 114 -----ILTLEFPDFYVTQVYTPNAGNGLVRLGDRQEWDKCYRAYLEEL--------DKKK 160 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + +GDFN + + F + Sbjct: 161 PVLASGDFNAAYQEIDLKHPENNHHSAGFTDEERAGFGQLLAAGFTDTFRQIHGQVEGVY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY+++ + + ++ G+R DHCPI Sbjct: 221 SWWAQRVRTAKANNSGWRIDYWLVSNRLADQVEKS----------EMIETGERA-DHCPI 269 Query: 299 SID 301 ++ Sbjct: 270 LLE 272 >gi|254777166|ref|ZP_05218682.1| exodeoxyribonuclease III [Mycobacterium avium subsp. avium ATCC 25291] Length = 272 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 73/305 (23%), Gaps = 64/305 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N S + + D D++ +QE + Sbjct: 1 MRLATWNVN----------------SIRSRLPRVLDWLARTDVDVLAMQETKCADG---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + + S Sbjct: 41 ------QFPTLPFFELGYEVAHVGFNQWNGVAIASRVGLDDVRVGFEGQPSWSGKPEVAA 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + + + +++ + + Y L+D Sbjct: 95 AAEARALAATCAGVRIWSLYVPNGRAVGDPHYAYKLD------WLAALRDSAAGWLREDP 148 Query: 204 P--FVIAGDFNRKINYL----------------GNNDDFWKTIDPNDSLIRFPKEKDSRC 245 +AGD+N F +D + + P Sbjct: 149 AAQIALAGDWNIAPQDDDVWSMEIFAGATHVSEPERRAFNAILDAQFADLVRPFAPGPGV 208 Query: 246 NANKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + R + ID+ + + D + +GK SDH P+ Sbjct: 209 YTYWDYTALRFPKRQGMRIDFILGSPALARR-------VTHAQIDREERKGKGASDHAPV 261 Query: 299 SIDYD 303 +D Sbjct: 262 LVDVS 266 >gi|71064661|ref|YP_263388.1| hypothetical protein Psyc_0080 [Psychrobacter arcticus 273-4] gi|71037646|gb|AAZ17954.1| conserved hypothetical protein [Psychrobacter arcticus 273-4] Length = 302 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 40/284 (14%), Positives = 77/284 (27%), Gaps = 50/284 (17%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L S+NI+ S + Q + +DI+ LQE+ N + + Sbjct: 59 LTSYNIH----------KGMSPMNRQVKVQGIAQALDIIGSDILCLQEVQGQN-LKRNIQ 107 Query: 86 KNTWCIFYSTERLI-------NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 N + E ++ K + H AV + P + + Sbjct: 108 YNEYPDQSQHEWFGEYLQLENSYGKNSEYENGHHGNAVLSRFPL-----DPKHNVNITVN 162 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + R + V+ G + V+ + F +Q + + +++ + Sbjct: 163 KLEQRGVLHCEVQPVGWNVPVVVLCAHLNLF-----------ERDRIKQYEAIVNYVRDE 211 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 P ++AGDFN K F + +D Sbjct: 212 IAPDQPLILAGDFNDWKKMS-----CDKLASNLGMTEAFKHCHGKLLPTFPAKLPVLSLD 266 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + LSDH P+S + Sbjct: 267 RIYVRN---LRIKDAWVH--------TGKPWSTLSDHLPLSAEL 299 >gi|328472297|gb|EGF43167.1| extracellular nuclease-like protein [Vibrio parahaemolyticus 10329] Length = 984 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 42/382 (10%), Positives = 94/382 (24%), Gaps = 96/382 (25%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT---------SDYTLLRQYAKNLD 65 A +R+ S+N+ S N + + +D Sbjct: 466 AAPAIAESDLRVASFNVLNYFTSVADSGNNNPTGQNRGATNHDEFLIQQAKIVSAMNKMD 525 Query: 66 ADIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIH 111 ADI+ L E+ + +AV + + + ++ + ++ I Sbjct: 526 ADIIGLMEVENNGFGDGSAVQNLVDALNAEIDDADDHYTYVEIADKDKYQEEYFGSDAIM 585 Query: 112 TAIAVRKKNVR----------------VLQQSYPLLGAKDSFSRAGNRRAVELLVEI--N 153 AI R K V + + R ++ + + Sbjct: 586 VAILYRAKVVTPKEAAKVIFTPEQHIAENTITRKDGAESNPAYDKYQRHSLLQTFTVQES 645 Query: 154 GKKIWVLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 G+ + ++ H KS + + A + + + K Sbjct: 646 GEDLSIVVNHFKSKGSECIEEWIAGVEDSEPADLQGNCNNFRVSAAHAVGEALKDVKGD- 704 Query: 203 VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSL------------- 234 ++ GD N + TI+ + Sbjct: 705 --VLLMGDLNAYGMEDPLLTLTDYSKEKYGRDIYTAGYTTINGGELQVEQTQIKQGYGLN 762 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291 + + +D+ + + + ++ I E ++ G + Sbjct: 763 NLNTLLHGTDTFSYTYSGELGNLDHALASNSLAQKVVAIEDWHINSLESNLFEYGSKYTG 822 Query: 292 ----------LSDHCPISIDYD 303 SDH P+ I D Sbjct: 823 DMPKYKDAFSASDHDPVIIAID 844 >gi|260900883|ref|ZP_05909278.1| endonuclease/exonuclease/phosphatase family protein [Vibrio parahaemolyticus AQ4037] gi|308106508|gb|EFO44048.1| endonuclease/exonuclease/phosphatase family protein [Vibrio parahaemolyticus AQ4037] Length = 984 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 42/382 (10%), Positives = 94/382 (24%), Gaps = 96/382 (25%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT---------SDYTLLRQYAKNLD 65 A +R+ S+N+ S N + + +D Sbjct: 466 AAPAIAESDLRVASFNVLNYFTSVADSGNNNPTGQNRGATNHDEFLIQQAKIVSAMNKMD 525 Query: 66 ADIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIH 111 ADI+ L E+ + +AV + + + ++ + ++ I Sbjct: 526 ADIIGLMEVENNGFGDGSAVQNLVDALNAEIDDADDHYTYVEIADKDKYQEEYFGSDAIM 585 Query: 112 TAIAVRKKNVR----------------VLQQSYPLLGAKDSFSRAGNRRAVELLVEI--N 153 AI R K V + + R ++ + + Sbjct: 586 VAILYRAKVVTPKEAAKVIFTPEQHIAENTITRKDGAESNPAYDKYQRHSLLQTFTVQES 645 Query: 154 GKKIWVLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 G+ + ++ H KS + + A + + + K Sbjct: 646 GEDLSIVVNHFKSKGSECIEEWIAGVEDSEPADLQGNCNNFRVSAAHAVGEALKDVKGD- 704 Query: 203 VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSL------------- 234 ++ GD N + TI+ + Sbjct: 705 --VLLMGDLNAYGMEDPLLTLTDYSKEKYGRDIYTAGYTTINGGELQVEQTQIKQGYGLN 762 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291 + + +D+ + + + ++ I E ++ G + Sbjct: 763 NLNTLLHGTDTFSYTYSGELGNLDHALASNSLAQKVVAIEDWHINSLESNLFEYGSKYTG 822 Query: 292 ----------LSDHCPISIDYD 303 SDH P+ I D Sbjct: 823 DMPKYKDAFSASDHDPVIIAID 844 >gi|209964341|ref|YP_002297256.1| hypothetical protein RC1_1020 [Rhodospirillum centenum SW] gi|209957807|gb|ACI98443.1| conserved hypothetical protein [Rhodospirillum centenum SW] Length = 322 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 36/324 (11%), Positives = 87/324 (26%), Gaps = 56/324 (17%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSD-------------YTLLRQYAKNLD----ADI 68 WN+ L + + ++ + L L D+ Sbjct: 7 FAFWNVENLFDVADSPRREERIRSRIARELVGWDEAVLSRKLAQLAAVIPMLGGGRGPDV 66 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + + E+ + + + ++ + + H++ I A+ + V + Sbjct: 67 LGVAEVENAHVLGRLAAALG----PGRDYGVVHAEGQDGRGIDVALLYDRALFTVNR--- 119 Query: 129 PLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 + ++ R+ R ++ + G I VL H S Y + Sbjct: 120 DEIFSRFIVRRSATRDILQATLTTVAGGNTIVVLVNHWPSRSGGAYESEPYRIMA---GE 176 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + I ++K + GDFN + D T + + + + Sbjct: 177 SLSYFHQRILEEKGRDTAILAMGDFNDEPFNRSLQDYALATRARSKATHPQSQSFYNPMW 236 Query: 247 -------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK---------SRGK 290 + +D ++ + + + E + + + Sbjct: 237 RFLGSAGSYVYDGEPNVLDQILVSRGLLRRGAPLTVREETLAIEALPALRTAKGGGRKFG 296 Query: 291 RLS-----------DHCPISIDYD 303 R S DH P+S+ Sbjct: 297 RPSEPKSYDPDGYADHFPVSVTVS 320 >gi|28899573|ref|NP_799178.1| extracellular nuclease-like protein [Vibrio parahaemolyticus RIMD 2210633] gi|260361411|ref|ZP_05774473.1| endonuclease/exonuclease/phosphatase family protein [Vibrio parahaemolyticus K5030] gi|260876683|ref|ZP_05889038.1| nuclease [Vibrio parahaemolyticus AN-5034] gi|28807809|dbj|BAC61062.1| extracellular nuclease-related protein [Vibrio parahaemolyticus RIMD 2210633] gi|308093950|gb|EFO43645.1| nuclease [Vibrio parahaemolyticus AN-5034] gi|308112902|gb|EFO50442.1| endonuclease/exonuclease/phosphatase family protein [Vibrio parahaemolyticus K5030] Length = 984 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 42/382 (10%), Positives = 94/382 (24%), Gaps = 96/382 (25%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT---------SDYTLLRQYAKNLD 65 A +R+ S+N+ S N + + +D Sbjct: 466 AAPAIAESDLRVASFNVLNYFTSVADSGNNNPTGQNRGATNHDEFLIQQAKIVSAMNKMD 525 Query: 66 ADIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIH 111 ADI+ L E+ + +AV + + + ++ + ++ I Sbjct: 526 ADIIGLMEVENNGFGDGSAVQNLVDALNAEIDDADDHYTYVEIADKDKYQEEYFGSDAIM 585 Query: 112 TAIAVRKKNVR----------------VLQQSYPLLGAKDSFSRAGNRRAVELLVEI--N 153 AI R K V + + R ++ + + Sbjct: 586 VAILYRAKVVTPKEAAKVIFTPEQHIAENTITRKDGAESNPAYDKYQRHSLLQTFTVQES 645 Query: 154 GKKIWVLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 G+ + ++ H KS + + A + + + K Sbjct: 646 GEDLSIVVNHFKSKGSECIEEWIAGVEDSEPADLQGNCNNFRVSAAHAVGEALKDVKGD- 704 Query: 203 VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSL------------- 234 ++ GD N + TI+ + Sbjct: 705 --VLLMGDLNAYGMEDPLLTLTDYSKEKYGRDIYTAGYTTINGGELQVEQTQIKQGYGLN 762 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291 + + +D+ + + + ++ I E ++ G + Sbjct: 763 NLNTLLHGTDTFSYTYSGELGNLDHALASNSLAQKVVAIEDWHINSLESNLFEYGSKYTG 822 Query: 292 ----------LSDHCPISIDYD 303 SDH P+ I D Sbjct: 823 DMPKYKDAFSASDHDPVIIAID 844 >gi|184154634|ref|YP_001842974.1| exodeoxyribonuclease [Lactobacillus fermentum IFO 3956] gi|227513882|ref|ZP_03943931.1| exodeoxyribonuclease III [Lactobacillus fermentum ATCC 14931] gi|183225978|dbj|BAG26494.1| exodeoxyribonuclease [Lactobacillus fermentum IFO 3956] gi|227087743|gb|EEI23055.1| exodeoxyribonuclease III [Lactobacillus fermentum ATCC 14931] Length = 279 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 85/305 (27%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R +SWNI++++ + + R + + K D++ +QE + Sbjct: 1 MRFISWNIDSINAALTGTSARAEETR------AVLEKIKAAAPDVIAIQETKLSKSGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ S + + K + +YP +GA + G Sbjct: 55 KHQGVLAELFAGYTVVWRSSVEPARKGYAGTMYLYKESLTPKVTYPTIGAPEPMDEEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++ +++ + + L + Sbjct: 114 -----IITLEFENFYLTEVYTPNSGTGLKRLAERQEWDDRYREYLTEL--------DRQK 160 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + +GDFN + + + F A Sbjct: 161 PVIASGDFNVAHEEIDLAHPANNHHSAGFTDEEREKFTALLAAGFTDSFRSLHPDETGAY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY+++ ++ + + DH PI Sbjct: 221 SWWAQRAVTSKVNNSGWRIDYWLVSDRLADQVVSSTMIDSGERR-----------DHAPI 269 Query: 299 SIDYD 303 +D + Sbjct: 270 QLDIN 274 >gi|121602932|ref|YP_980261.1| endonuclease/exonuclease/phosphatase [Polaromonas naphthalenivorans CJ2] gi|120591901|gb|ABM35340.1| Endonuclease/exonuclease/phosphatase [Polaromonas naphthalenivorans CJ2] Length = 277 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 80/286 (27%), Gaps = 48/286 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-----GSY 77 ++++ NI+ + LR + + AD+VFLQE+ Sbjct: 32 SFKVLTVNIHKGFTFFNRKF----------ILSELRDAVRTVGADVVFLQEVAGSHLKHA 81 Query: 78 NAVAKVFPKNTWCIFY-STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + S + + H AV K V ++ + + Sbjct: 82 EKFDNYPEEPHYEYLADSIWEQFAYGRNAVYTHGHHGNAVLSKFPIVRFENRDISISG-- 139 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R + +++ G+ V I + S +QQ + + D + Sbjct: 140 ---PERRGMLHCELQVPGQSRNVHAICVHLGLV-----------ESHRTQQMKLVCDLVR 185 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 ++ P V+AGDFN + + F + + Sbjct: 186 KEIPVRAPVVVAGDFNDW-----RRRAHAQMAKGANLHEVFVQANGQAARTFPARLPLLQ 240 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + I LSDH P++ + Sbjct: 241 LDRIYVRNAIGHSPIVLPSH-----------PWSHLSDHAPLAAEI 275 >gi|310817228|ref|YP_003965192.1| exodeoxyribonuclease III, putative [Ketogulonicigenium vulgare Y25] gi|308755963|gb|ADO43892.1| exodeoxyribonuclease III, putative [Ketogulonicigenium vulgare Y25] Length = 262 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 28/308 (9%), Positives = 71/308 (23%), Gaps = 75/308 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV-- 80 L +WNIN L+ + + D++ LQE S + Sbjct: 2 TFTLATWNIN----------------SVRLRAELVARLLREELPDVLCLQECKSPVELIP 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++F + + +A+ + ++ + A Sbjct: 46 TEIFRALGYPYMI-----------ARGQKGYNGVAILSRLPMREVGAHDFADLGHARHIA 94 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 G + + + ++ + D + + ++D +K Sbjct: 95 GQL----------DNGVTIHNFYVPAG--GDIPDREQNIKFGQKLDYLTQMRDHFHGEKP 142 Query: 201 SLVPFVIAGDFNRKINYLGN--NDDFWKTID-------------PNDSLIRFPKEKDSRC 245 ++ GD N + K + + + + Sbjct: 143 QKA--ILVGDLNIAPREDDVWNHKALLKIVSHTPIEVDHLGAAMDSGDWVDITRANIPEG 200 Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ ++ + SDH Sbjct: 201 RLYSWWSYRSPDWDAADKGRRLDHIWATRDIAAAGHSS-------RVLRPARGWEGPSDH 253 Query: 296 CPISIDYD 303 P+ +D Sbjct: 254 APVFATFD 261 >gi|118922|sp|P11937|DNAS1_SHEEP RecName: Full=Deoxyribonuclease-1; AltName: Full=Deoxyribonuclease I; Short=DNase I Length = 260 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 38/283 (13%), Positives = 86/283 (30%), Gaps = 26/283 (9%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NI T E + + +S + + + D ++ AV K+ Sbjct: 1 LKIAAFNIRTFGETKMSNATLSSY---------IVRILRRYDIALIEQVRDSHLVAVGKL 51 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S +++ ++ R V VL G + + + +R Sbjct: 52 LDDLNQDDPNSYHYVVSEPLGRNSYKERYLFVFRPNKVSVLDTYQYDDGCESCGNDSFSR 111 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + K+ I D++ S L Q +W L Sbjct: 112 EPAVVKFSSPSTKVKAFAIVPLHSAPSDAVAEINSLYDVYLDVQQKW----------DLN 161 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 ++ GDFN +Y+ ++ + + + + + N D V+ Sbjct: 162 DIMLMGDFNADCSYVTSSQWSSIRLRTSSTFQWLIPDSADTTATSTNCAY----DRIVVA 217 Query: 264 QNAYKF-LIQESFSEILYNEDDIKSR--GKRLSDHCPISIDYD 303 + + ++ S + S +SDH P+ + Sbjct: 218 GSLLQSSVVGPSAVPFDFQAAYGLSNEMALAISDHYPVEVTLT 260 >gi|86130797|ref|ZP_01049396.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia donghaensis MED134] gi|85818208|gb|EAQ39368.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia donghaensis MED134] Length = 328 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 35/330 (10%), Positives = 90/330 (27%), Gaps = 51/330 (15%) Query: 14 VPCTASVAQKVR--LVSWNINTLSEQ-------EGVSLWKNSVKRTTSDYTL----LRQY 60 + +K++ + +N+ L + + + + + L + Sbjct: 5 TAFAKAQTKKIKCAIGFYNLENLFDTKNDPATLDDDFTPGGFKEWNSYKFDKKVKKLAKV 64 Query: 61 AKNLD-------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 + ++ + E+ + + + + + I Sbjct: 65 ISKIGKKETATSPSLLGVAEVENKAVLEALIKTSKLEDEGYAIVHYDSPDE---RGIDVG 121 Query: 114 IAVRKKNVRVL-QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 + +KK+ V ++ L + R R + + + G ++ +L H S + Sbjct: 122 LLYKKKDFAVHKSEAITLYLETEEGDRDFTRDILYVQGNLLGTEVHILVNHWPSRRRGAN 181 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 + + +++ + + + Q +I GDFN + KT N Sbjct: 182 ETSHKRIKAAQKNREL--IDNLVAQ--NPEARVIIMGDFNDGPHSESIKKHLVKTDFYNP 237 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE------------------- 273 L + + S + D + N + + Sbjct: 238 MLYLGTRYEGSLNYNYEWFIF----DQIIFSNNFVRIYDNDLLYEKSDIYNDFYLTEYDG 293 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F + K+ SDH P+ Sbjct: 294 KFKGNPFRTYAGKNYLGGYSDHFPVFTILT 323 >gi|315921791|ref|ZP_07918031.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D2] gi|313695666|gb|EFS32501.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D2] Length = 367 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 40/342 (11%), Positives = 84/342 (24%), Gaps = 71/342 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67 R+VSWNI L + SL + + R + + + Sbjct: 32 SFRVVSWNIENLFDTHHDSLKNDHEYLPDAIRHWNYSRYKKKLADVARVITAIGEWNPPA 91 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 +V L E+ + + + ++ + N I A+ ++ ++L Sbjct: 92 LVGLCEVENDTVLRDLTRRSPLKELSYRYVMTNSPDL---RGIDVALLYQRDLFKLLSSR 148 Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL-LS 185 + R + + + + G + V H S Y + L Sbjct: 149 S--ISIPPFKQHRPTRDLLHVSGLLLAGDTLDVFVCHFPSRSGGAKESEPYRLYVAHILR 206 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT------------------ 227 + + + S +I GDFN Sbjct: 207 TEVDSIMN-----IRSHPQAIIMGDFNDYPTNQSILKILKAEAPPVKTNDLASTTDSANA 261 Query: 228 -----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK-------------- 268 + K K + K +D+ ++ Sbjct: 262 STVTPSSLKLYHLLARKAKSENFGSYKFRGEWGLLDHLIVSGTLLNQSNHFFTSEEKANV 321 Query: 269 -------FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + + +SDH PI D++ Sbjct: 322 CLLPFLLKDDEKYGDKEPFRTYKGMKYQGGISDHLPIYTDFE 363 >gi|298385343|ref|ZP_06994901.1| exodeoxyribonuclease III [Bacteroides sp. 1_1_14] gi|298261484|gb|EFI04350.1| exodeoxyribonuclease III [Bacteroides sp. 1_1_14] Length = 254 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 89/305 (29%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++++N+N L L ++ + DI+ LQE + A Sbjct: 2 MKIITYNVNGLRAAVSKGLP---------------EWLVQENPDILCLQETKLQPDQYPA 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +VF + + + + + + +A+ K + G Sbjct: 47 EVFEALGYKAYLYSAQKKGY----------SGVAILTKQEP----DHVEYGMGIEAYDNE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + + V+ ++ S D + + + + ++T+ +++ Sbjct: 93 GRF-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEDFQKYVTELRKT 140 Query: 202 LVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ GD+N + + + + + Sbjct: 141 RPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLSAGFIDSFRLLYPEKQE 200 Query: 246 NANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + R IDY + + L S + SDHCP+ Sbjct: 201 YTWWSYRFNSRAKNKGWRIDYCMTSEPVRPMLKSASILNDAVH-----------SDHCPM 249 Query: 299 SIDYD 303 +++ + Sbjct: 250 ALEIE 254 >gi|295680429|ref|YP_003609003.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002] gi|295440324|gb|ADG19492.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002] Length = 250 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 80/287 (27%), Gaps = 56/287 (19%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 T + +++R+ ++N++ +G + +DADI LQE+ Sbjct: 15 TFARERELRIGTYNLHGAVGIDGKFAP-----------KRIGDVLTEIDADIFALQEVPL 63 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 A + + AV + ++ L S Sbjct: 64 GGASSPDVLALLQRMTGLDAVAGPT---FDTPARRFGNAVLTRYPVRAVRTLDL-----S 115 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 F R A++ ++ NG+ V+ HL + S Q + + Sbjct: 116 FKSREPRGALDADIDCNGELWRVVATHLGL-------------ASSERRAQVEQVLQRFD 162 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 +P ++ GD N + F + F + R + Sbjct: 163 TPA---LPVILLGDLN---------EWFVYGRTLRRLVTHFRRATALRTFPTRFPLF--A 208 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D + +L + + + SDH P+ Sbjct: 209 LDRIWVHPG----------ERLLRVDVHRTALSRVASDHYPLIAHIS 245 >gi|110801105|ref|YP_695823.1| exodeoxyribonuclease III [Clostridium perfringens ATCC 13124] gi|110675752|gb|ABG84739.1| exodeoxyribonuclease III [Clostridium perfringens ATCC 13124] Length = 250 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 39/299 (13%), Positives = 76/299 (25%), Gaps = 78/299 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L Y K+ DADI LQE Sbjct: 1 MKLISWNVNGLRACVKKGF---------------LDYFKSEDADIFCLQETKLQEG-QID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + G R Sbjct: 45 LDLEGYFQYWNYAEKKGY----------SGTAIFTKKEPLNV----YYGINMEHHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++++ ++ + + L S Sbjct: 91 -----VITLEFEDLFMVTVYTPNSQSELARLEYRMEWEDDFRNYLLEL--------SSKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GD N D + T+ + + F Sbjct: 138 GVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDKFSTLLSSGFIDTFRYFNPDLEGVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF++ N + + S + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEASIDTEIL-----------GSDHCPV 245 >gi|20092035|ref|NP_618110.1| hypothetical protein MA3219 [Methanosarcina acetivorans C2A] gi|19917247|gb|AAM06590.1| predicted protein [Methanosarcina acetivorans C2A] Length = 330 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 45/331 (13%), Positives = 105/331 (31%), Gaps = 55/331 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV-- 80 K+R+ ++N+ L N ++R + ++ADI+ LQE+ V Sbjct: 2 KLRIATFNLENL-----DFQKSNKEPTLEERIAVMRPQLQRVNADILCLQEVNGQEEVGH 56 Query: 81 ------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + K+T ++ ++ ++ + I R + + Q + A Sbjct: 57 PRRLLALEALLKDTQYASFNRVSTVDEGGSQVYDERNLVILSRCEILEHHQYKHNFASAP 116 Query: 135 ---------------DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 + R + +++ K + V+++HLKS Sbjct: 117 LYRIVTAIANGGEEQTAKEITWERPILHAKIKVGEKVMDVINLHLKSKIPTYIPGQKLDN 176 Query: 180 ---------------SCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNND 222 S QA + I K V+ GDFN + + + Sbjct: 177 YTWKTASGWAEGFFISSMKRVGQALEARMLIDDLFNKTENPWIVVCGDFNSEFDDVPVEA 236 Query: 223 DFWKTIDPNDS-------LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + + + +S + + +D+ ++ ++ + Sbjct: 237 IRGRVENTGNGELARRIMFPCEMSIPESTRFSLYHQGKGNMLDHLLVCRDMLAYYKGSEV 296 Query: 276 S-EILYNEDDIKSRGKRL--SDHCPISIDYD 303 E+L++E + + SDH P+ +++ Sbjct: 297 HNELLHDESIAFATDIKFPESDHSPVIAEFE 327 >gi|146299724|ref|YP_001194315.1| exodeoxyribonuclease III Xth [Flavobacterium johnsoniae UW101] gi|146154142|gb|ABQ04996.1| exodeoxyribonuclease III Xth [Flavobacterium johnsoniae UW101] Length = 258 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 83/303 (27%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N ++ +L ++ DIV LQE+ + Sbjct: 1 MKIATYNVNGING----------------RLNVLLRWLDEAAPDIVCLQELKAPQD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ +A+ +N+++ + + L G + Sbjct: 41 ------NFPLKAINDAGYNAVWHGQKQWNGVAILARNMKIEEITRTLPGDDEDVQSR--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ING I + ++L + + + Y + L + V Sbjct: 92 ---YIEALING--IVIACLYLPNGNPVPGPKFEYK------LKWFDRLAERAAILLSLKV 140 Query: 204 PFVIAGDFNRKINYLG---NNDDFWKTIDPND-----------SLIRFPKEKDSRCNANK 249 P ++ GD+N L + + + Sbjct: 141 PVLLIGDYNVMPTELDVYKPEKWINDALFKPEIRKAFAAIVSQGWTDAIRTLYPDEKIYT 200 Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+F++ L D ++ SDH P+ I Sbjct: 201 FWDYFRNAYQRNAGLRIDHFLLSPQIASALHSGGV-------DRHVRGWEKTSDHAPVWI 253 Query: 301 DYD 303 D Sbjct: 254 QID 256 >gi|297539760|ref|YP_003675529.1| exodeoxyribonuclease III Xth [Methylotenera sp. 301] gi|297259107|gb|ADI30952.1| exodeoxyribonuclease III Xth [Methylotenera sp. 301] Length = 262 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 35/307 (11%), Positives = 82/307 (26%), Gaps = 75/307 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VA 81 ++++S N+N + ++ + + +AD+V +QE+ + A Sbjct: 1 MKIISLNLNGIRSATNKG---------------VQTWLQTQNADVVCMQEIKAQQADMTP 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + ++ +S K + + + Sbjct: 46 EMLNPAGYYGYFHYAEKKGYSGVGI---------YCKAKPDAVIEGLGGSNDGVQDIDSE 96 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R +E + V+ ++L S + + + Q L +S Sbjct: 97 GRY-----LECQFGNLSVISLYLPSGSSGEERQAFKFSVMTRFMLHMQAL-------IKS 144 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 +I GD+N D + + + Sbjct: 145 GREIIICGDWNIAHKEADLKNYKGNKKNSGFLPEERAWLTTLFDEVGWVDVYRTLHPNTT 204 Query: 246 NA-NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + N+ IDY + + S + +R SDH Sbjct: 205 DECYTWWSNRGQAYAKNVGWRIDYQIATPAIAAKAVSTSV-----------YKAERFSDH 253 Query: 296 CPISIDY 302 P+ ++Y Sbjct: 254 APLIVEY 260 >gi|315635841|ref|ZP_07891103.1| endonuclease/exonuclease/phosphatase [Arcobacter butzleri JV22] gi|315479820|gb|EFU70491.1| endonuclease/exonuclease/phosphatase [Arcobacter butzleri JV22] Length = 313 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 101/324 (31%), Gaps = 56/324 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR---QYAKNLDADIVFLQEMGSYNA 79 K+R+ ++N+ K + ++ DIV QE+ S + Sbjct: 2 KLRVGTFNLFQFCSPPFSFYTKKEKFTPEEWNEKIAWCKNQLNLMNCDIVGFQEVFSNDE 61 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + + + ++ K++ I T +A+ K + + D+ S Sbjct: 62 LKSLCLEVGFK-YFEVVDFAKVDKKNEKVYISTTVAIASKFPIINIEKI------DTKSF 114 Query: 140 AGNRRAVELLVEING-KKIWVLDIHLKSFCFLD--------------------SLENTYS 178 R ++ ++ + K I V HLKS + +L++ YS Sbjct: 115 KFARIPIKAIISLPNEKNITVYITHLKSNRENEFEYIFTKNDTLEDKLKKVEVALKDNYS 174 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR-----KINYLGNNDDFWKTIDPNDS 233 S +A+ L I + P ++ D N I+ L N + K + +D Sbjct: 175 LSLKQRINEAKILFYDIK---SNKTPTILMCDLNDKEFSITIDALTNKRFYNKNLKKDDY 231 Query: 234 LIRFPKEKDSR--------------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 L+ + +DY + + S+ + Sbjct: 232 LLFDAYYLHKPKIYNPHPEFKGIKRTPTSYFAGKGNILDYIFVSKELQ---KISSYEVLD 288 Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303 + + + SDH + + + Sbjct: 289 KHLQKNHNGSLKQSDHAQVVCEIE 312 >gi|299143331|ref|ZP_07036411.1| exodeoxyribonuclease III [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517816|gb|EFI41555.1| exodeoxyribonuclease III [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 250 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 80/304 (26%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N L + ++AD+ LQE+ Sbjct: 1 MKLVSWNVNGLRAVIKKGFVDS---------------FNEINADVFALQEIKLSEG-QLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + ++ + ++ A+ + + + D+ R Sbjct: 45 FELEGYKMY----------YNYAQRKGYSGTAIFTRIEPISVSYGIGMEEHDTEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ +K + + + + + L++ Sbjct: 91 -----VITAEFEKFYFVTCYTPNSKRGLERLEYRMVWEDVFRNYLNKLRE--------TK 137 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + + + + F R + Sbjct: 138 PVVLCGDLNVAHEEIDLANPATNHKNAGFTNEERSKFTELLKSGYIDTFRYFYPDRKDEY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N IDYFV+ + L + + SDHCP+ Sbjct: 198 SWWSNFAKSRERNIGWRIDYFVVSEELKGNLSDAKIHQSV-----------MGSDHCPVE 246 Query: 300 IDYD 303 + + Sbjct: 247 LVLE 250 >gi|298293365|ref|YP_003695304.1| exodeoxyribonuclease III [Starkeya novella DSM 506] gi|296929876|gb|ADH90685.1| exodeoxyribonuclease III [Starkeya novella DSM 506] Length = 272 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 29/308 (9%), Positives = 69/308 (22%), Gaps = 65/308 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + + +WNIN L+ + A D++ LQE + + Sbjct: 2 PLTIATWNIN----------------SVRLRIGLVEKLAAEYQPDVICLQETKTPDDRFP 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + ++ + +A+ K D+ Sbjct: 46 LKDAAKFGYPHAAIH---------GQKGYHGVAILSKRPFDQVSRQGFCDIGDA------ 90 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT-QKKES 201 R L G + + + D + + W ++ Sbjct: 91 RHICVTLGREAGLEAPLTIHNFYIPAGGDIPDPALNEKFRHKLAFLDEATMWEQLHPEDP 150 Query: 202 LVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEK-DSRC 245 V+ GD N ++ + + + + + Sbjct: 151 TARSVLVGDLNIAPLETDVWSHKQLLDVVSHTPIEVEKLEKLQAAGRWVDVMRNFVPPDE 210 Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ + +R SDH Sbjct: 211 RLYTWWSYRAADWEASNRGRRLDHVWATPAFAPTARAMNVV-------RAARSWERPSDH 263 Query: 296 CPISIDYD 303 P+ + +D Sbjct: 264 VPVVVTFD 271 >gi|294626440|ref|ZP_06705040.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599239|gb|EFF43376.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 259 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ SWN+N+L+ L+Q+ D+V +QE + + Sbjct: 1 MKIASWNVNSLN----------------VRLPHLQQWLAAFAPDVVGIQETKLEDHKFPD 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + +A+ ++ V Q Sbjct: 45 AALAALGYRSVFC------------GQKTYNGVAILSRSPAVDVQ-----MGIPGLDDVQ 87 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + ++++++ + + + + Y + DWI Q+ + Sbjct: 88 QRVIAATV-----DGVRIINLYVVNGQDVGTDKYAYK------LRWLAAAHDWIAQELQR 136 Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPND-----------SLIRFPKEKDSRCN 246 V+ GDFN + +D + D L + + Sbjct: 137 YPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAALDKLLALGLHDAFRLHNQDAE 196 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID ++ ++ D +R SDH P Sbjct: 197 HFSWWDYRQAGFRRNLGLRIDLTLVSDTLCARAVESGI-------DREPRTWERPSDHAP 249 Query: 298 ISIDY 302 + Sbjct: 250 AWVRL 254 >gi|148259431|ref|YP_001233558.1| exodeoxyribonuclease III Xth [Acidiphilium cryptum JF-5] gi|146401112|gb|ABQ29639.1| exodeoxyribonuclease III Xth [Acidiphilium cryptum JF-5] Length = 267 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 32/305 (10%), Positives = 73/305 (23%), Gaps = 67/305 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + +WNIN LL DIV LQE + Sbjct: 4 LTVATWNIN----------------SVRLRRDLLHSLMDQAAPDIVCLQE---TKVPDDL 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP++ L + +A+ + + P K Sbjct: 45 FPEDL------GTALGLPHVLKRGMKGYNGVAILSRLPLTAVEDTPDWCMKSDCRH---- 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ + + + ++ + D + +P +D + Sbjct: 95 --IAARIDTGTDPLVLHNFYVPAG--GDIPDRAENPKYGHKLDFIAEARDHFAMNRPHRT 150 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N ++ + + Sbjct: 151 --MLVGDLNIAPLENDVWSHKQLLNVVSHTPPETEGLNAWRTEGFIDAIRHFVPDDQKLF 208 Query: 249 KNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +D+ + + L + + + +R SDH P+ Sbjct: 209 TWWSYRNRDWRASNRGRRLDHIWVSTDLIGNLARHAILQD-------ARDWERGSDHVPV 261 Query: 299 SIDYD 303 + D Sbjct: 262 VLTLD 266 >gi|57505734|ref|ZP_00371660.1| exodeoxyribonuclease III [Campylobacter upsaliensis RM3195] gi|57016007|gb|EAL52795.1| exodeoxyribonuclease III [Campylobacter upsaliensis RM3195] Length = 252 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 80/304 (26%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNIN L ++ + D + QE+ A Sbjct: 1 MKLLSWNINGLRAICDKGG---------------LEWLREEKIDFIGFQEI---KASEDK 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FPK + + + + ++ + ++ + F R Sbjct: 43 FPKKIYEFPFKHMYFNSAKRA-----GYSGVMSLCNFESETKK-------CEFFDDDEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++E N I + +I+ + + + + ++ + + Sbjct: 91 -----VLEHNFNNIVLFNIYFPNGQKDEER-------LNHKMKFYADFLAYLNKLLKEGK 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GD N L + + + F + Sbjct: 139 EVIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLALGFIDTFREINGDIKEKY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + L ++ SDH P+ Sbjct: 199 SWWSYRMKARERNVGWRIDYFFISKGLKSKLKNAFIKNDIF-----------GSDHAPVG 247 Query: 300 IDYD 303 I+ D Sbjct: 248 IELD 251 >gi|313109621|ref|ZP_07795568.1| putative nuclease [Pseudomonas aeruginosa 39016] gi|310882070|gb|EFQ40664.1| putative nuclease [Pseudomonas aeruginosa 39016] Length = 266 Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 82/304 (26%), Gaps = 70/304 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++ ++N+N + L + + DIV LQE+ + +A Sbjct: 2 DTLKIATFNVNG----------------IQTRLAALLAWLEREAPDIVCLQELKTPDA-- 43 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +A+ ++ + L+ L G Sbjct: 44 --------RFPAAALEKAGYGAIWQGQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRY 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 AV + V ++L + + Y + + L + ES Sbjct: 96 LEAAV--------DGLLVASLYLPNGNPQPGPKFDYKLA------WFEHLIRHAAELMES 141 Query: 202 LVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCN 246 P V+AGDFN + D + ++ + + + R Sbjct: 142 GHPVVLAGDFNVVPSDFDIYDTRSWKKDALLQPESRECFERLLRQGWVDALRQRFPDRRI 201 Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ + L D + SDH P Sbjct: 202 YTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDAGV-------DRWVRGEEHASDHAPA 254 Query: 299 SIDY 302 + Sbjct: 255 WVSL 258 >gi|229032715|ref|ZP_04188676.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271] gi|228728610|gb|EEL79625.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271] Length = 337 Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 44/324 (13%), Positives = 107/324 (33%), Gaps = 64/324 (19%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T ++ + + +N ++D Sbjct: 35 APDNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 94 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117 LQE+ + + F N S + + ++ Sbjct: 95 LQEVDIKSL--RSFDVNGHEFLKKGLPDYASSFGKNYDTKWVPVPITSPMGYAEAGLSTF 152 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKI-WVLDIHLKSFCFLDSLE 174 K + + L G + R + R VE + +N K ++++HL + Sbjct: 153 SKYKVQTAERFQLPGMEPWPKRLFDLDRAIVEHKIPVNNGKFVRLVNLHLSA-------- 204 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 Y + QQ ++LK+++ + E+ ++ GD+N+ ++ + +D + P + Sbjct: 205 --YDEGGKIRKQQVEFLKEYMNKHYENGDYVIMGGDWNQLLSDVQLSDPKFVKERPEWLV 262 Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278 + + ID F++ N ++ ++ Sbjct: 263 ELPKNFTNGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 320 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P+S + Sbjct: 321 KFEN----------SDHNPVSAVF 334 >gi|149246874|ref|XP_001527862.1| hypothetical protein LELG_00382 [Lodderomyces elongisporus NRRL YB-4239] gi|146447816|gb|EDK42204.1| hypothetical protein LELG_00382 [Lodderomyces elongisporus NRRL YB-4239] Length = 842 Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 44/326 (13%), Positives = 81/326 (24%), Gaps = 42/326 (12%) Query: 19 SVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 S + ++S+N + + + L + DI+ +QE+ + Sbjct: 508 SSSNLFTMLSYNTLCQHYATPKMYKFTPSWALNWEYRRNALEKEILQYGTDIICMQEVET 567 Query: 77 YNAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY---- 128 P + + + R ++ DS A + ++ + Sbjct: 568 RTFTEFWLPLLSQKGYKGLFLNKTRSKTMNENDSKKVDGCATFYKVDKFTLVHKQNFEYN 627 Query: 129 -------PLLGAKDSFSRAGNR----RAVELLVEINGKKIWVLDIHLKSFC-FLDSLENT 176 KD F+R N+ L + G+KI ++ HL F D Sbjct: 628 SVCMGSEKYKKTKDIFNRFMNKDNVALISYLQHKETGEKICFVNTHLHWDPAFNDVKTLQ 687 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN------DDFWKTIDP 230 L + + + ++ VI GDFN + + Sbjct: 688 IGILLEELQGIIKRYQHTSSMEEVKNSSLVICGDFNSVKESAVYQLFSTGSSQSHEDMAD 747 Query: 231 NDSLIRFPKEKDSRC-------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESFS 276 D N IDY + Sbjct: 748 RDYGKFTESGFHHPFKLKSAYEPVGELPFTNLTPAFTDNIDYIWYSTSTLGVKGLLGKVD 807 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302 E + SDH PI + Sbjct: 808 EEYASNCIGFPDANFPSDHVPILAKF 833 >gi|260460592|ref|ZP_05808843.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum WSM2075] gi|259033697|gb|EEW34957.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum WSM2075] Length = 305 Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 44/333 (13%), Positives = 81/333 (24%), Gaps = 89/333 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 ++LVS+NI +G D + + ADI+ LQE+ Sbjct: 1 MKLVSYNIQYGFGSDG-----------RYDLSRAARIVA--GADIIALQEVERHWQRSNF 47 Query: 75 -GSYNAVAKVFPKNTWCI--FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 ++++ P W + + R N V K + + L Sbjct: 48 DDQPELLSRLLPDYHWVYGPAFDMDASERRDGRLVNRRRQFGTMVLSKLPIAWSRLHALP 107 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + A+E ++ + VL +HL + +Q +L Sbjct: 108 MRRTLRPLNTRNAALECMIRTPAGPLRVLSLHLAH------------IAAEERLEQIDYL 155 Query: 192 KDWITQKKESLVPF------------------------VIAGDFNRKINYLGNNDDFW-- 225 + P+ + GDFN + Sbjct: 156 LAQHRRAPSEGGPWSGADDEPSRNWTSGEAEPENPLAAIWMGDFNMEPGSAEYRRIVGST 215 Query: 226 ------KTIDPNDSLIRFPKEKDSRCNANKNLR---------NKIPIDYFVMDQNAYKFL 270 +D E + +D+ + + Sbjct: 216 PYHRGAAYLDGFVDAAAVASEPVLDFHTRDFHTHVKTIDGKLTNRRLDHCFVGGMFAGRV 275 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 G+ SDH P+ ID D Sbjct: 276 RSVGADI-----------GEVASDHFPLRIDID 297 >gi|317061856|ref|ZP_07926341.1| dnase I-like protein dhp2 precursor [Fusobacterium sp. D12] gi|313687532|gb|EFS24367.1| dnase I-like protein dhp2 precursor [Fusobacterium sp. D12] Length = 260 Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 77/283 (27%), Gaps = 41/283 (14%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 ++ S+N L + DY L + + D D+V L+E+ AV + Sbjct: 9 KVASFNTLHLGT-------------SKKDYKLFCETIR--DFDLVGLEEVMKKEAVENLV 53 Query: 85 PKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H+ ++ + +K V++++Q R Sbjct: 54 KELNKNTGSIWEGHISQHAVGENGYNEFYGYVWKKDKVKLIKQEGFYPDP----DNKFVR 109 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202 +I + H +A L ++ Sbjct: 110 EPYGATFKIGNFDFTFVLQHAVYG-----------KKVLERKLEAAELVKVYDYFQDRDI 158 Query: 203 --VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 +IAGDFN D + D + + D Sbjct: 159 KENDILIAGDFNLS-ASDKAFDSLYNHRDNITCTLDPKTKTTVGTKGLS-----SAYDNI 212 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +S + K++SDH PI I+ + Sbjct: 213 FISKKYTTEYTGKSGIVD-FTNKKYGEARKKISDHLPIYIEVN 254 >gi|260779533|ref|ZP_05888423.1| extracellular nuclease-related protein [Vibrio coralliilyticus ATCC BAA-450] gi|260604342|gb|EEX30646.1| extracellular nuclease-related protein [Vibrio coralliilyticus ATCC BAA-450] Length = 865 Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 49/373 (13%), Positives = 101/373 (27%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R + LDADI+ L E Sbjct: 470 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANSFEEFEVQQAKIVNAILRLDADIIGLME 529 Query: 74 MGSYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNND------------IHTAIAV 116 + + A+ ++ + I +R + + + I T + Sbjct: 530 IENNGFGDSGAIRQLVEQLNQRIDKKKDRYDFVAVDSNGDKVTDENDSIGTDVITTGVIY 589 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEING--KKIWVLDI 162 R K ++ + + ++ + R ++ +I G +KI V Sbjct: 590 RSKVAKLKEVRVIEMPSQQAPEVLDDDGKVIEDGKNYQRNSLAPTFKIKGTDEKITVAIN 649 Query: 163 HLKS--------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL------ 202 H KS + + A L D + + K Sbjct: 650 HFKSKGSKCWEDAAPVDQGGQGGVDADQQGSCENFRVAAAVALGDALKEIKGHKVILGDL 709 Query: 203 ------VPFVIAGDF-------------NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 P ++ D+ N I D I + I K Sbjct: 710 NSYGMEDPMLVLTDYSEEKYGKQIKAARNTFIGDTEQFGDHGAVITEGYNYINAVAMKHP 769 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290 + +D+ ++ + K + + I E + Sbjct: 770 NSWSYSYNDEVGALDHLLISPSLKKHFVDATDWHINGGESTLFDYNDEYKGDLPKYNDHF 829 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 830 RSSDHDPAVLELN 842 >gi|84516350|ref|ZP_01003710.1| exodeoxyribonuclease III [Loktanella vestfoldensis SKA53] gi|84510046|gb|EAQ06503.1| exodeoxyribonuclease III [Loktanella vestfoldensis SKA53] Length = 259 Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 81/302 (26%), Gaps = 68/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN + L + + D+ LQE+ S + Sbjct: 1 MKIATFNING----------------VKARIETLCDWLDDSAPDVAILQEIKSVDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ +A+ K D +R Sbjct: 41 ------GFPRQLIEDRGYTLETHGQKGFNGVAILSKLPLEDVTRGLPGDDADEQARW--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E V + + + ++L + + Y + + L T + Sbjct: 92 --IEATV-VGDVAVRICGLYLPNGNPAPGPKFDYKLA------WMERLLARATALLADEM 142 Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++AGD+N + + + ++ + E + + Sbjct: 143 PALMAGDYNIIPQGMDAARPQVWRDDALFRPESRAAYRRILNLGFTEAFRTLEPGAGHYS 202 Query: 248 NKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + N I ID+F++ L + SDH P+ + Sbjct: 203 FWDYQAGAWEKNNGIRIDHFLLTPQCADLLAGAWIE-------KDLRARDKPSDHVPVWV 255 Query: 301 DY 302 + Sbjct: 256 EL 257 >gi|296269289|ref|YP_003651921.1| endonuclease/exonuclease/phosphatase [Thermobispora bispora DSM 43833] gi|296092076|gb|ADG88028.1| Endonuclease/exonuclease/phosphatase [Thermobispora bispora DSM 43833] Length = 246 Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 38/280 (13%), Positives = 73/280 (26%), Gaps = 54/280 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++N+ +L + D L + K L D++ LQEM + Sbjct: 2 LRVATYNVRSLRD----------------DRAALVRMIKALRPDVLCLQEMPRLPGRRRA 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + L F+ R Sbjct: 46 WRELAALTGMTIAAGCRAGGVAVFAGPGLRVV------------HGLGRPLRRFTGLERR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +VE +G + HL + L A+ + + Sbjct: 94 AIALAVVERSGARYAACSFHL------------DLVGEARLRHAAEIVPAVEGAARAFGA 141 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 V+AGD N + + W+ + + + R + ID D Sbjct: 142 HAVLAGDVNEEPDGP-----VWRYL-AGRYTDCLAAAAGATGGTFPSPRPRARIDGIFAD 195 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + I R SDH P+ Sbjct: 196 RGLRVVSCAVAAEPIHDVV--------RASDHRPVVAVLT 227 >gi|260173107|ref|ZP_05759519.1| hypothetical protein BacD2_14655 [Bacteroides sp. D2] gi|315921383|ref|ZP_07917623.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695258|gb|EFS32093.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 361 Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 87/305 (28%), Gaps = 67/305 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++++S+N+ + S E + Y N +ADI+ LQE + Sbjct: 99 GSIKILSYNVMSFSNLEKKDGKNP-----------ILSYLANSNADIICLQEYNTATNKK 147 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + ++ + H + +A K + + R Sbjct: 148 YLTEQDVKKALKAYPYQSIHQQG----KGDVQLACFSKFPILSIHPIEYKSNYNGSMRY- 202 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------- 178 ++ +N + +++ HL+S Y Sbjct: 203 -------VLNVNNDTLTLINNHLESNKLTKEDRGIYEDMIKDPNAKKVKTGLRQLIRKLT 255 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + ++ + QA + I + K ++ GDFN + + + +D F Sbjct: 256 EASAIRASQADSVARVIAESKYPTT--IVCGDFNDG-SISYTHRILTQELDD-----AFT 307 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + ID ++ N + + R + SDH PI Sbjct: 308 QSGKGLGISYNLNKFYFRIDNILISPNLKAY-------------NCTVDRSIKASDHYPI 354 Query: 299 SIDYD 303 Sbjct: 355 WCYIS 359 >gi|229550274|ref|ZP_04438999.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis ATCC 29200] gi|255973048|ref|ZP_05423634.1| predicted protein [Enterococcus faecalis T1] gi|300859716|ref|ZP_07105804.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TUSoD Ef11] gi|307274440|ref|ZP_07555623.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX2134] gi|229304537|gb|EEN70533.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis ATCC 29200] gi|255964066|gb|EET96542.1| predicted protein [Enterococcus faecalis T1] gi|300850534|gb|EFK78283.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TUSoD Ef11] gi|306508834|gb|EFM77921.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX2134] gi|315157326|gb|EFU01343.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0043] gi|315158389|gb|EFU02406.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0312] gi|327534861|gb|AEA93695.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis OG1RF] Length = 254 Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 84/287 (29%), Gaps = 48/287 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+ V + + + + Q D + +QE+ Sbjct: 1 MKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138 Y+T ++ + AI ++ ++ + Y L Sbjct: 54 A--------YTTFTCLSAEREGDGQGEGLAILYNEQKIQAIDTGYFWLSETPQQPSIHPE 105 Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A+ L + V+++HL + + ++ + L D I Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNANKNLRNK 254 Q P ++ GDFN + + + K N + P+ K Sbjct: 158 QY-----PTLLMGDFNAE-SGEEVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAEL 211 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + + + G+ SDH P+ + Sbjct: 212 EEIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248 >gi|159045260|ref|YP_001534054.1| putative endonuclease/exonuclease/phosphatase [Dinoroseobacter shibae DFL 12] gi|157913020|gb|ABV94453.1| putative endonuclease/exonuclease/phosphatase [Dinoroseobacter shibae DFL 12] Length = 375 Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 43/377 (11%), Positives = 95/377 (25%), Gaps = 101/377 (26%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVK---------------------------------- 48 K RL ++NI L + S + + Sbjct: 3 KFRLCTFNIENLFTRFNFSGFSDPDAARYLSPIVQFYGDYGDDDLSKFAAFKRMVETAAI 62 Query: 49 -RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107 + DA + LQE+ ++ + + + + + Sbjct: 63 AQDDDKRQQTALAIAEADAHLYCLQEVDGFDPLTRFLEAYVKKTMGESFHNRVLHEGNDP 122 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGA-----------------------KDSFSRAGNRR 144 I A ++ + L G+ +R R Sbjct: 123 RGIDVAAISVRRFPFYSRSHAWLTGSVIDNTETGRALLDAYPLARGRARSLRSARVFRRD 182 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 +EL+V + + + + H KS D+ S + +A +++ IT+K Sbjct: 183 CLELVVPVGDGTLTLYNCHFKSMGGRDAE-----KSLATRQTEAILVRELITRKFPDPAA 237 Query: 205 FV--IAGDFNR-----------------------KINYLGNNDDFWKTIDPNDSLIRFPK 239 + I GD N + + ++ + Sbjct: 238 GLWAICGDLNDALSYRFVSSVRQADGSFAESLRDRPPSGEDASGVAPLLEDGFGINLVAA 297 Query: 240 EKDSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESF--------SEILYNEDDIKSRG 289 ++ + + +DY + + + G Sbjct: 298 LPEAARWTHYYAGGRSKTQLDYVIASPALAARVRSTPEIIRTGMPQRVPNLDTPRYPRIG 357 Query: 290 K---RLSDHCPISIDYD 303 + SDHCP+ +++D Sbjct: 358 WDRPKASDHCPVVVEFD 374 >gi|152987919|ref|YP_001346307.1| exodeoxyribonuclease III [Pseudomonas aeruginosa PA7] gi|150963077|gb|ABR85102.1| exodeoxyribonuclease III [Pseudomonas aeruginosa PA7] Length = 261 Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 82/304 (26%), Gaps = 70/304 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++ ++N+N + L + + DIV LQE+ + +A Sbjct: 2 GTLKIATFNVNG----------------IQTRLAALLAWLEREAPDIVCLQELKTPDA-- 43 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +A+ ++ + L+ L G Sbjct: 44 --------RFPAAALEKAGYGAIWQGQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRY 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 AV + V ++L + + Y + + L + +S Sbjct: 96 LEAAV--------DGLLVASLYLPNGNPQPGPKFDYKLA------WFEHLIRHAAELMKS 141 Query: 202 LVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCN 246 P V+AGDFN + D + ++ + + + R Sbjct: 142 GHPVVLAGDFNVVPSNFDIYDTRSWKKDALLQPESRECFERLLRQGWVDALRQRFPDRRL 201 Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ + L D + SDH P Sbjct: 202 YTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDAGV-------DRWVRGEEHASDHAPA 254 Query: 299 SIDY 302 + Sbjct: 255 WVSL 258 >gi|126699766|ref|YP_001088663.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile 630] gi|254975745|ref|ZP_05272217.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile QCD-66c26] gi|255093132|ref|ZP_05322610.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile CIP 107932] gi|255307161|ref|ZP_05351332.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile ATCC 43255] gi|255314874|ref|ZP_05356457.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile QCD-76w55] gi|255517548|ref|ZP_05385224.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile QCD-97b34] gi|255650659|ref|ZP_05397561.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile QCD-37x79] gi|260683749|ref|YP_003215034.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile CD196] gi|260687409|ref|YP_003218543.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile R20291] gi|306520587|ref|ZP_07406934.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile QCD-32g58] gi|115251203|emb|CAJ69034.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile] gi|260209912|emb|CBA63862.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile CD196] gi|260213426|emb|CBE05082.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile R20291] Length = 209 Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 86/276 (31%), Gaps = 70/276 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V++NI+ K T + Y K LD D++ LQE+ +A Sbjct: 1 MKIVTYNIH-----------KGMDSNNRLTLTKMGLYLKQLDCDVICLQEVLYPQFLALK 49 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 N +F + + +N S+ R Sbjct: 50 AVLNMDGVFATNVKKVNMIYG---------------ICTFTTSKMLNSNHFFLTSKKEQR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A+ + ++ G+ I V++ HL ++A+ L + I + + Sbjct: 95 GALCITIDAYGRIINVINTHLGLD----------------RQERAKQLDEIIDYRNRLVG 138 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 ++ GDFN K +L +D +++ ++ IDY ++ Sbjct: 139 IVILCGDFNEKNVFLSMFNDMAISLNK--------------SYLPTFEKSNSRIDYIFVN 184 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 +N LSDH P+ Sbjct: 185 KNTELK--------------GYTVEKIYLSDHYPVI 206 >gi|2462635|emb|CAA04665.1| deoxyribonuclease I [Oreochromis mossambicus] Length = 284 Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 34/278 (12%), Positives = 87/278 (31%), Gaps = 28/278 (10%) Query: 29 WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-GSYNAVAKVFPKN 87 +NI + ++ + ++ + K D++ +QE+ S + + Sbjct: 32 FNIKSFG---------DTKASNATLMNIITKIVKRY--DVILIQEVRDSDLSATQTLMNY 80 Query: 88 TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE 147 + +++ S R+ V V++ G +++ +R Sbjct: 81 VNKDSPQYKYIVSEPLGASTYKERYLFLYREALVSVVKSYTYDDGPEETGQDTFSREPFV 140 Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207 ++ + + + ++ + +L +A+W + V+ Sbjct: 141 VMFSSKNTAVKDFTLIPQHTSPDLAVRELNALYDVVLDVRARW----------NTNDIVL 190 Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 GDFN +Y+ + I + + + + D V+ + Sbjct: 191 LGDFNAGCSYVSGSAWQQIRIFTDKTFHWLITDAADTTVSQTVCPY----DRIVVTTDMM 246 Query: 268 KFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYD 303 + ++Q S Y D + L SDH P+ + Sbjct: 247 RGVVQNSAKVYNYMTDLNLKQDLALAVSDHFPVEVKLS 284 >gi|325205029|gb|ADZ00483.1| exodeoxyribonuclease III [Neisseria meningitidis M01-240355] Length = 259 Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 80/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S N+N + + +Y ADIV +QE+ + A Sbjct: 2 LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 KN + ++ +AV K +G R Sbjct: 47 DMKNPHGMHGHWHCAEKRG--------YSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + ++ V+ ++L S + + + + K Sbjct: 95 F-----VRCDFGRLSVISLYLPSGSSAEERQ-------QVKYCFLDAFYPMLEAMKNEGR 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248 V+ GD+N + + + + Sbjct: 143 DIVVCGDWNVAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGY 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY ++ + + ++ SDH P+ Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 251 Query: 300 IDYDF 304 ++YD+ Sbjct: 252 VEYDY 256 >gi|319948930|ref|ZP_08023037.1| exodeoxyribonuclease III Xth [Dietzia cinnamea P4] gi|319437410|gb|EFV92423.1| exodeoxyribonuclease III Xth [Dietzia cinnamea P4] Length = 284 Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 83/311 (26%), Gaps = 55/311 (17%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 A + + + N+N + +R+ ++ L + ++ AD+V LQE+ + Sbjct: 2 AAVSLTVSTVNVNGIRA--------AVKQRSETNLGFL-PWLESSGADVVALQEVRADED 52 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + S+ +A+ + +G D Sbjct: 53 QTRKALAPALDAGWH------LIGSASSMKGRAGVALLSRQESSDV----CVGYGDPEFA 102 Query: 140 AGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R + ++G+ + V ++L S ++ + + Sbjct: 103 ESGRYIEAVYPGAVDGETVTVASLYLPSGSANTPKQDEKDRFLKTFREFLAERAAELK-- 160 Query: 199 KESLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPN-DSLIRFPKEK 241 +I GD+N + + Sbjct: 161 SREGHEMIICGDWNIAHREEDLKNHKGNHKSSGFLPHEREWMTDVFADGSGWTDIVRHRR 220 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + IDY V+ +++ D ++ R Sbjct: 221 PDEVGPYSWWSQRGKAFDNDAGWRIDYQVVSDGLVDRAVKDWV-------DRAEAYDMRW 273 Query: 293 SDHCPISIDYD 303 SDH P+++ Y+ Sbjct: 274 SDHAPVTVVYE 284 >gi|296387271|ref|ZP_06876770.1| putative exonuclease III [Pseudomonas aeruginosa PAb1] Length = 266 Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 82/304 (26%), Gaps = 70/304 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++ ++N+N + L + + DIV LQE+ + +A Sbjct: 2 DTLKIATFNVNG----------------IQTRLAALLAWLEREAPDIVCLQELKTPDA-- 43 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +A+ ++ + L+ L G Sbjct: 44 --------RFPAAALERAGYGAIWQGQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRY 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 AV + V ++L + + Y + + L + ES Sbjct: 96 LEAAV--------DGLLVASLYLPNGNPQPGPKFDYKLA------WFEHLIRHAAELMES 141 Query: 202 LVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCN 246 P V+AGDFN + D + ++ + + + R Sbjct: 142 GHPVVLAGDFNVVPSDFDIYDTRSWKKDALLQPESRECFERLLRQGWVDALRQRFPDRRL 201 Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ + L D + SDH P Sbjct: 202 YTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDAGV-------DRWVRGEEHASDHAPA 254 Query: 299 SIDY 302 + Sbjct: 255 WVSL 258 >gi|260896624|ref|ZP_05905120.1| nuclease [Vibrio parahaemolyticus Peru-466] gi|308086332|gb|EFO36027.1| nuclease [Vibrio parahaemolyticus Peru-466] Length = 984 Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 43/382 (11%), Positives = 94/382 (24%), Gaps = 96/382 (25%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT---------SDYTLLRQYAKNLD 65 A +R+ S+N+ S N + + +D Sbjct: 466 AAPAIAESDLRVASFNVLNYFTSVADSGNNNPTGQNRGATNHDEFLIQQAKIVSAMNKMD 525 Query: 66 ADIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIH 111 ADI+ L E+ + +AV + + + ++ + ++ I Sbjct: 526 ADIIGLMEVENNGFGDGSAVQNLVDALNAEIDDADDHYTYVEIADKDKYQEEYFGSDAIM 585 Query: 112 TAIAVRKKNVR----------------VLQQSYPLLGAKDSFSRAGNRRAVELLVEI--N 153 AI R K V + + R ++ + + Sbjct: 586 VAILYRAKVVTPKEAAKVIFTPEQHIAENTITRKDGAESNPAYDKYQRHSLLQTFTVQES 645 Query: 154 GKKIWVLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 G+ + ++ H KS + + A + + + K Sbjct: 646 GEDLSIVVNHFKSKGSECIEEWIAGVEDSEPADLQGNCNNFRVSAAHAVGEALKDVKGD- 704 Query: 203 VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSL------------- 234 ++ GD N + TI+ + Sbjct: 705 --VLLMGDLNAYGMEDPLLTLTDYSKEKYGRDIYTAGYTTINGGELQVEQTQIKQGYGLN 762 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291 + + +DY + + + ++ I E ++ G + Sbjct: 763 NLNTLLHGTDTFSYTYSGELGNLDYALASNSLAQKVVAIEDWHINSLESNLFEYGSKYTG 822 Query: 292 ----------LSDHCPISIDYD 303 SDH P+ I D Sbjct: 823 DMPKYKDAFSASDHDPVIIAID 844 >gi|255656137|ref|ZP_05401546.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile QCD-23m63] gi|296450430|ref|ZP_06892186.1| endonuclease/exonuclease/phosphatase [Clostridium difficile NAP08] gi|296879447|ref|ZP_06903441.1| endonuclease/exonuclease/phosphatase [Clostridium difficile NAP07] gi|296260691|gb|EFH07530.1| endonuclease/exonuclease/phosphatase [Clostridium difficile NAP08] gi|296429593|gb|EFH15446.1| endonuclease/exonuclease/phosphatase [Clostridium difficile NAP07] Length = 209 Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 90/276 (32%), Gaps = 70/276 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V++NI+ K T + Y K L+ D++ LQE+ +A Sbjct: 1 MKIVTYNIH-----------KGMDSNNRLTLTKMGLYLKQLNCDVICLQEVLYPQFLALK 49 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 N +F + + +N I + + L + R Sbjct: 50 AVLNMDGVFATNVKKVNMI---------YGICTFTTFKMLNSNHFFLTS------KKEQR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A+ + ++ G+ I V++ HL ++A+ L + I + + Sbjct: 95 GALCITIDAYGRIINVINTHLGLD----------------RQERAKQLDEIIDYRNRLVG 138 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 V+ GDFN K +L +D +++ + ++ IDY ++ Sbjct: 139 IVVLCGDFNEKNVFLSMFNDMAISLNK--------------SYLSTFEKSNSRIDYIFVN 184 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 +N LSDH P+ Sbjct: 185 KNTELK--------------GYTVEKIYLSDHYPVI 206 >gi|54302544|ref|YP_132537.1| hypothetical protein PBPRB0865 [Photobacterium profundum SS9] gi|46915966|emb|CAG22737.1| hypothetical protein PBPRB0865 [Photobacterium profundum SS9] Length = 234 Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 32/246 (13%), Positives = 64/246 (26%), Gaps = 21/246 (8%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + + DI LQE + + + + V Sbjct: 1 MTSIFSEQNIDIAGLQEAFNDQIIYLARNLSNYGWVGVGRDDGKTKGEAVPIFYRADKYV 60 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + P + A + R + +E VL + F + Sbjct: 61 KLGGGTFWLSETPEVVASVGWDADLTRITSWVRLEDKESSKRVLVFNAH---FDHIGKVA 117 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 S LLS++A+ + + ++ GD N + + + + + + S Sbjct: 118 RQQSAKLLSKKAKEIIG------DDNDAVIVLGDLNFERSDVASYEALTSLFNDARSTTI 171 Query: 237 FPKEKDSR---CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 P E + IDY ++ + +I G S Sbjct: 172 KPFEGIDGKEYTYHGYFKKPTEDIDYIFVNDKL---------RVNTFKYVNIIKDGIYSS 222 Query: 294 DHCPIS 299 DH + Sbjct: 223 DHLSVI 228 >gi|152967922|ref|YP_001363706.1| exodeoxyribonuclease III Xth [Kineococcus radiotolerans SRS30216] gi|151362439|gb|ABS05442.1| exodeoxyribonuclease III Xth [Kineococcus radiotolerans SRS30216] Length = 273 Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 35/272 (12%), Positives = 74/272 (27%), Gaps = 51/272 (18%) Query: 57 LRQYAKNLDADIVFLQEMGSYNA-VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + + D D++ LQE+ + +A + K P + + H++ + A+A Sbjct: 25 MHSWLDARDPDVLLLQEVRAPDAELRKALP---------SYPHVAHTEAAAKGRAGVAVA 75 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 R + V + S +E+ V+ + ++ ++ S + Sbjct: 76 TRSEFTAVRIGFAHDPHFETSGRW------IEVDVDTAIGPMTLVSTYVHSGEVGTPQQE 129 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD------------ 223 + + L + + ++AGD N + Sbjct: 130 DKHRFLDAMDVRFAELGAIAAE---TGREALVAGDLNVGHTERDIKNWKGNRGKAGFLED 186 Query: 224 ----FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFL 270 F + + + IDY ++ L Sbjct: 187 ERAHFDHWFGDLGWVDTQREVAGDVDGPYAWWSWRGQAFDNDTGWRIDYQLVTPGLGARL 246 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D S +R SDH P+ Y Sbjct: 247 QGV-------ETDRAASYAERFSDHAPVVATY 271 >gi|320094719|ref|ZP_08026473.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 178 str. F0338] gi|319978361|gb|EFW09950.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 178 str. F0338] Length = 274 Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 34/311 (10%), Positives = 85/311 (27%), Gaps = 72/311 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N++ + + + + D++ +QE A Sbjct: 1 MRIATWNVNSIRARAARATA----------------FLERSGTDVLAMQETKCTPA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +AV ++ + + Sbjct: 41 ------QFPAEAFEEAGYHVAVHGLNQWNGVAVASRHPILRVHDHFPGQPAFGDPAVVEA 94 Query: 144 RAVELLVEINGK-----------KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 RA+ ++++++G ++ V +++ + LD Y + L+ Sbjct: 95 RALGVVIDVSGALEGAPGSPAPAELTVWSLYVPNGRELDHPHYAYK------LEWLAALR 148 Query: 193 DWITQKKESLVP--FVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSL 234 ++ + GD+N + F + Sbjct: 149 AQARGWLDADPAALVALVGDWNVAPQDQDVWDMAAFEGATHVSAPEREAFAAFAEDGWIE 208 Query: 235 IRFPKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + + LR + ID+ + D + +GK Sbjct: 209 ATRARTTNYTYWDYQRLRFPKNEGMRIDFAYASPALEARITSA-------RIDRDERKGK 261 Query: 291 RLSDHCPISID 301 SDH P+ +D Sbjct: 262 GASDHVPVILD 272 >gi|315922569|ref|ZP_07918809.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313696444|gb|EFS33279.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 314 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 34/288 (11%), Positives = 85/288 (29%), Gaps = 37/288 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++++S+NI + + + K+ RT + + ++ +QE Sbjct: 57 NQIKVMSFNIRYYNTND--TGDKSWDARTAAFIP----MIEEQKPTVIGMQEARPPQLKW 110 Query: 82 KVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + R N + K P + + Sbjct: 111 LEENWKDYGYIGKGRRANNANNDEFVPIFYRKKAVELVKWDCFWLSETPDVPGSQGWDNT 170 Query: 141 GNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R A + + +GKK + ++ H+ + ++ + + + +++ Sbjct: 171 VPRVATWAIFKHIASGKKFFFINTHIDVGSTIAPGKS------------MEVIVNKMSEL 218 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 +P ++ DFN++I+ + + K S +D Sbjct: 219 NPEGLPMLLTADFNKQIDS-DIFNGVKTFMTNVRLSAPVTDSKYSYTGFGTANPY--IVD 275 Query: 259 YFVMD--QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + I + + I Y +SDH PI ++ Sbjct: 276 HIFCTGFKALKFETIDKVYQNITY-----------ISDHYPIVGKLEY 312 >gi|332291109|ref|YP_004429718.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus 4H-3-7-5] gi|332169195|gb|AEE18450.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus 4H-3-7-5] Length = 341 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 36/306 (11%), Positives = 84/306 (27%), Gaps = 57/306 (18%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 ++ +LV ++++++N+ + K Q + Sbjct: 81 HIFSLVRIGGGEDIGDGTTLKVLTYNVRQFNIHGWSDEVKVG--------ERTIQLISDK 132 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 + D+V QE + + + S + + K + Sbjct: 133 NPDVVSFQEYYPGFKPDEKVYPYEYKVMKSPSKS-------------FGQVIFSKYPIIN 179 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC--- 181 S ++ + + + V ++H +SF +L N + Sbjct: 180 SGSLDFENTGNN--------GIYADIATATDTVRVYNMHFQSFSLSPNLANLQKENSKKL 231 Query: 182 -----SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 +Q + ++ + S P ++ GDFN D + Sbjct: 232 LGRLGQAFEKQETQVAKFLNNEATSPYPVIVTGDFNNSATSYMYRKV------KGDKVDA 285 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 F K + ID+ ++D++ + ++ LSDH Sbjct: 286 FAKAGSGTGATFWFDIIPLRIDFILVDESL--------------PVTNFETYDVDLSDHK 331 Query: 297 PISIDY 302 P + Sbjct: 332 PSMATF 337 >gi|323492096|ref|ZP_08097258.1| hypothetical protein VIBR0546_14882 [Vibrio brasiliensis LMG 20546] gi|323313657|gb|EGA66759.1| hypothetical protein VIBR0546_14882 [Vibrio brasiliensis LMG 20546] Length = 869 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 49/373 (13%), Positives = 104/373 (27%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G + R + Y + LDADI+ L E Sbjct: 474 GDLRIATFNVLNYFNSPFGGDANPHGDNRGANSYEEFEVQQAKIVNAILRLDADIIGLME 533 Query: 74 MGSYN-----AVAKVFPK---------NTWCIFYSTERLINHSKRDSNND---IHTAIAV 116 + + A+ ++ + + + I + + I T + Sbjct: 534 IENNGFGDSGAIRQLVDQLNSRIEKKKDRYDIVAIDSNGDKVTDENDYIGTDVITTGVIY 593 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEING--KKIWVLDI 162 R K V++ + + ++ + R ++ ++ G +KI V Sbjct: 594 RPKVVKLKESRVIPMPSQQAPEVLDDNGKVIEDGKNYQRDSLAPTFKVKGTKEKITVAIN 653 Query: 163 HLKS--------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL------ 202 HLKS + + A L D + + Sbjct: 654 HLKSKGSKCWEDAAPVEQGGQGGQDLDKQGSCENFRVAAAVALGDALNEIDGHKVILGDL 713 Query: 203 ------VPFVIAGDF-------------NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 P ++ D+ N I+ D I + I + Sbjct: 714 NAYGMEDPLLVLTDYSEEKYGKTIKAARNTYIDGQVQFGDEGAVITDSYGYINAVAKAHP 773 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK------------- 290 + +D+ +M + K + + I E + + Sbjct: 774 NSWSYSYNDEVGALDHLLMSPSLEKHFVDATDWHINGGESKLFDYNEEYKGDLPKYNDHF 833 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 834 RSSDHDPAVLELN 846 >gi|312222242|emb|CBY02182.1| similar to endonuclease/exonuclease/phosphatase family protein [Leptosphaeria maculans] Length = 327 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 37/308 (12%), Positives = 79/308 (25%), Gaps = 22/308 (7%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 + +F + + +R+++ NI + + +R L Y Sbjct: 9 FFFLAIFIALAMRVNATLPIRMLTHNIRYAASVPFIGEKP-WPERKQLILNQL-HYNTLH 66 Query: 65 DAD-IVFLQEMGSYNAVAKVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + + + LQE+ V + + W S + Sbjct: 67 NPEAFICLQEVLHEQLVDILAGLGDEWTHIGVGRDDGKEKGEYSPIVYRKGVWEPTTWQT 126 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 V K + R K ++ + +S S Sbjct: 127 VWLNE-DGSIGKKGWDAGSVRILTVGTFRHRESKEVIVGMSTHL---DNSGMIARRESAK 182 Query: 183 LLSQQAQWLKDWIT-----QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 ++ Q + +PF ++GD N +I+ + Sbjct: 183 IILQTIDAVTATTNLTNSSFGVRDRLPFFLSGDLNSEID-GEAYQILNNSTASTQDAKDL 241 Query: 238 PKEKDSRCNANKNLRNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 K + N + + ID+ + E +S + + G S Sbjct: 242 AKWRYGDTNTFTDFGDNEKRFTLIDFVFVGPRGGTNWDVEGYSVLP----NKFEDGVFSS 297 Query: 294 DHCPISID 301 DH + +D Sbjct: 298 DHRAVVVD 305 >gi|282906344|ref|ZP_06314196.1| LOW QUALITY PROTEIN: sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus Btn1260] gi|282330541|gb|EFB60058.1| LOW QUALITY PROTEIN: sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus Btn1260] Length = 282 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 75/256 (29%), Gaps = 26/256 (10%) Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE--------RLINHSKRDSNNDIHTAIAV 116 + D+V E A K+ Y T S +A+ Sbjct: 30 NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAI 89 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 K + + F N+ V +E NGK + V+ H +S DS Sbjct: 90 VSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNGKNVHVIGTHTQS---EDSRCGA 145 Query: 177 YSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 + ++Q + + D++ + I GD N D K ++ ND L Sbjct: 146 GH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNVN-KGTEEFKDMLKNLNVNDVLY 203 Query: 236 RFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK--FLIQESFSEILYNEDDIKSR 288 N +DY D++ + L+ E +E D Sbjct: 204 AGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAFP 263 Query: 289 GKRL----SDHCPISI 300 + SDH PI Sbjct: 264 YYYVYNDFSDHYPIKA 279 >gi|241759740|ref|ZP_04757840.1| endonuclease/exonuclease/phosphatase [Neisseria flavescens SK114] gi|241319748|gb|EER56144.1| endonuclease/exonuclease/phosphatase [Neisseria flavescens SK114] Length = 261 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 91/287 (31%), Gaps = 47/287 (16%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---- 75 + V + S+N++ S + L +D++FLQE+ Sbjct: 2 SPRPVTITSYNMH----------KGMSALNRKVQVNRMADALGALGSDVLFLQEVQGQHL 51 Query: 76 SYNAVAKVFPKNTWCIFY-STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + I S + ++ K H A+ + + + + Sbjct: 52 NRSHRTNFPDAPHYDIIGDSLDYHRSYGKNAVYPKRHHGNAILSRLPLKTENNLNI---- 107 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 S ++ R + V G + ++ + + +Q + + D+ Sbjct: 108 -SVNKLEQRGLLHCEVVPEGWEDPLVCLCVHLNLREPD-----------RLKQYRAISDY 155 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + P +IAGDFN + + + +D N+ F R + Sbjct: 156 VGRYIRPESPLIIAGDFNDW--RQKSARELGRALDLNE---VFVDNTGKRPKTFPSRLPI 210 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + +D +++ +E + LSDH P+S+ Sbjct: 211 LSLDRIYTRN-----------LDVIDSEIHNSKDWQHLSDHLPLSVT 246 >gi|294900680|ref|XP_002777063.1| carbon catabolite repressor protein, putative [Perkinsus marinus ATCC 50983] gi|239884517|gb|EER08879.1| carbon catabolite repressor protein, putative [Perkinsus marinus ATCC 50983] Length = 320 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 43/341 (12%), Positives = 89/341 (26%), Gaps = 82/341 (24%) Query: 19 SVAQKVRLVSWNIN---------------TLSEQEGVSLWKNSVK--------RTTSDYT 55 S Q ++++ +NI L + + + Sbjct: 2 SQVQHLKVMQYNILGRHFAFSKYFSYAWPYLGGSKAKNFCPAAKDAPQLPTLLDWNMRLP 61 Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 +L + + ADI+ L EM SY + + +++ R D +AI Sbjct: 62 MLVKTCLDSSADILCLCEMDSYEDFRQALGS-YYDGYFAP--------RAGGRDDGSAIF 112 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLE 174 R+ ++++ R A ++ + G+ V+ HL Sbjct: 113 WRRSILKLMSAKTLHYTGGSE------RVAAICRLQNLYGQTFTVVGTHLYWKG------ 160 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND---------DFW 225 SC S + L + + P ++ GD N + Sbjct: 161 -----SCPTQSHEVDELTTELRAILDRDEPVILCGDLNNHRDSDTFMRIRDCGMEDGFTA 215 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVM---DQNAYKFLIQESFSEIL 279 + P P + IDY + + ++ + Sbjct: 216 AGLKPPRYTSLVPPSYVLSSRSGSYRLLPGREDEIDYIFVGGQSSDLTLKVVDAVAIDSR 275 Query: 280 YNE-----------------DDIKSRGKRLSDHCPISIDYD 303 +E + SDH P+ + + Sbjct: 276 NDETGNGVVTGADSRDSSVAERGIPNMSHASDHLPVMCEVE 316 >gi|315605812|ref|ZP_07880844.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 180 str. F0310] gi|315312510|gb|EFU60595.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 180 str. F0310] Length = 271 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 36/308 (11%), Positives = 80/308 (25%), Gaps = 69/308 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R +WN+N + + + + D DI+ +QE+ Sbjct: 1 MRFATWNVN----------------SIRTRIDRVIAFLERSDTDILAMQEIKCRPD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +AV + + + Sbjct: 41 ------QFPTAPFEEAGYQVAVHGLNQWNGVAVASRLAITDVRDHFPHQPSFGEPATVEA 94 Query: 144 RAVELLVEINGK---------KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 RA+ + V++ G + + +++ + LD+ Y L + Sbjct: 95 RALGVTVDVTGVLEAREGSPSSLTIWSLYVPNGRELDNPHYAYKLD------WLATLAEQ 148 Query: 195 ITQKKESLVPFV-IAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRF 237 + + GD+N + D F + Sbjct: 149 GRTWLSDSQALIALVGDWNVAPHDEDVWDMSVFEGSTHVSRAERDAFAAFERDGWVEVTR 208 Query: 238 PKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + + LR + ID+ + D + +GK S Sbjct: 209 DRVTNYTYWDYQKLRFPKNQGMRIDFAYCSAPLA-------ARVTGAHIDRDERKGKGAS 261 Query: 294 DHCPISID 301 DH P+ +D Sbjct: 262 DHVPVIVD 269 >gi|198274048|ref|ZP_03206580.1| hypothetical protein BACPLE_00185 [Bacteroides plebeius DSM 17135] gi|198273126|gb|EDY97395.1| hypothetical protein BACPLE_00185 [Bacteroides plebeius DSM 17135] Length = 352 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 37/299 (12%), Positives = 91/299 (30%), Gaps = 62/299 (20%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-MGS 76 + + ++ +++N+ + + LR+Y + DAD+V LQE + Sbjct: 95 EADGEVMKFLTYNVMHMQGDTEEEGYP------------LRRYIQESDADVVCLQEYLWD 142 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 KVFP + + + V + P + A ++ Sbjct: 143 EQKTKKVFPMYPYRCLL-------------RASNENGMVCLSRFPIVSVKRIPYVSANNA 189 Query: 137 FSRAGNRRAVEL-----------LVEINGKKIWVLDIHLKSFCFLDSLE----NTYSPSC 181 + + ++ + K+++ + + + S + + Sbjct: 190 SFLLQLKMKEDTLSLVCNHLESNKLDAHDKELYEGLLKSPNEQKVKSDSKYLLRKLADAV 249 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 ++ + QA + I+++ S ++ GDFN ++ + + Sbjct: 250 AIRAPQADSVAQVISRQ--SGKYLLVCGDFNDSPISYAHHTI------GKGLTDAYREAG 301 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ + + F + D+ S SDH P+ Sbjct: 302 WGPGFSYNRNFLYFRIDHLFVSK---------GFRVLKCRVDNSIS----ASDHYPLWC 347 >gi|163739629|ref|ZP_02147038.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter gallaeciensis BS107] gi|161387088|gb|EDQ11448.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter gallaeciensis BS107] Length = 241 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 45/283 (15%), Positives = 79/283 (27%), Gaps = 55/283 (19%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 ++RL S+NI K+ Q + AD+V LQE Sbjct: 8 QPGRLRLASYNIQ-----------KSVGLDLRRRPRRTLQVIEGTGADLVLLQEADKR-L 55 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + + + ++++ S A+ R + + + L Sbjct: 56 PPRPAALPHFVLDEAGWQIVDLGGAGSLGWHGNAVIWRGDGIELQDHGHIPLPG------ 109 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R AV L + V+ HL +Q L + I + Sbjct: 110 LEPRGAVWALFHTGLGPLRVVGAHLGLTT-------------KARHEQVHHLAEVIAR-- 154 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 E +P V AGDFN + + P + + LR +D Sbjct: 155 EPELPTVWAGDFNDW-----SRQPVLDHLAPQLRFV-------PPRASFPALRPMGALDR 202 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + E++ + SDH P+ D Sbjct: 203 IAVSAGL----------EVVDSGVYRTRPAHIASDHLPVWADL 235 >gi|317476209|ref|ZP_07935460.1| exodeoxyribonuclease III [Bacteroides eggerthii 1_2_48FAA] gi|316907620|gb|EFV29323.1| exodeoxyribonuclease III [Bacteroides eggerthii 1_2_48FAA] Length = 254 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 33/302 (10%), Positives = 86/302 (28%), Gaps = 73/302 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+N L + L ++ N D++ LQE Sbjct: 1 MKIITYNVNGLRA---------------AVTKGLPEWLANEQPDVLCLQETK-------- 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + H + ++ +A+ K + G + R Sbjct: 38 LQPEQYPAEALDALGYKHYLYSARKKGYSGVAILTKREP----DHVEYGMGMEEYDSEGR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + ++ ++ S D + + + + ++ + + + Sbjct: 94 F-----MRADYGDLSIVSVYHPSGTSGDERQ-------AFKMVWLEKFRQYVVELQRTRP 141 Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GD+N + +D W T N+ I + Sbjct: 142 KLILCGDYNICHEAIDIHDPVRNATNSGFLPEEREWMTRFLNEGFIDTFRLLHPDKQEYT 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY +++++ L + SDHCP+ + Sbjct: 202 WWSYRFNSRAKNKGWRIDYCMVNESVRPMLKDARILNDAVH-----------SDHCPMML 250 Query: 301 DY 302 + Sbjct: 251 EI 252 >gi|317407170|gb|EFV87163.1| endonuclease/exonuclease/phosphatase [Achromobacter xylosoxidans C54] Length = 251 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 38/292 (13%), Positives = 77/292 (26%), Gaps = 51/292 (17%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 A + +++ N + + LR+ ++ D+VFLQE+ + Sbjct: 2 SAMTLTVLTVNTH----------KGYTSFNRRYMLYDLREALRSAAPDLVFLQEVVGEHQ 51 Query: 80 V-------AKVFPKNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + + T R + + H AV + +++ + Sbjct: 52 DMAARHPGDHGAAASQYEFLADTLWRDFAYGRNAVYPAGHHGNAVLSRYPIARFENHDVS 111 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 +R + +E+ G+ V I + QQ L Sbjct: 112 VGGH-----ESRGLLHCELEVPGQAGAVHAICVHLGLL-----------ARHREQQIASL 155 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 + + + +IAGDFN + F Sbjct: 156 CRLVARDVPAGASLLIAGDFNDW------RLKADHLLRDCRVQEVFTSRLGRPARTFPAR 209 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +D + + + RLSDH PI+ + Sbjct: 210 WPLLRLDRIYVRNVRGWRPVPLASRV-----------WSRLSDHVPIAAEIS 250 >gi|254465319|ref|ZP_05078730.1| exodeoxyribonuclease III [Rhodobacterales bacterium Y4I] gi|206686227|gb|EDZ46709.1| exodeoxyribonuclease III [Rhodobacterales bacterium Y4I] Length = 297 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 32/310 (10%), Positives = 64/310 (20%), Gaps = 75/310 (24%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--N 78 A L +WNIN ++++ + D++ LQE S Sbjct: 35 AMPFTLATWNIN----------------SVRLREPIVQKLLQEEGPDVLCLQECKSPVEK 78 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 K F + + +A+ + + Sbjct: 79 IPVKGFAALGYRHMI-----------ARGQKGYNGVAILSRLPIEDAGEQDFAALGHARH 127 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 V +E V+ + D + + ++DW Sbjct: 128 -------VAGRLENG-----VVIHNFYVPAGGDVPDRDVNEKFGQKLDYLTAMRDW--FH 173 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDS 243 + V+ GD N D I + Sbjct: 174 ADKPEKSVLVGDLNIAPREDDVWDHKKLLKVVSHTPVEVEHLADTQEAGGWIDITRRDIP 233 Query: 244 RCNANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + +D+ + ++ S Sbjct: 234 GGKLYSWWSYRARDWDAADKGRRLDHIWATPDIAGAGHSS-------RILRDARGWEKPS 286 Query: 294 DHCPISIDYD 303 DH P+ +D Sbjct: 287 DHAPVFATFD 296 >gi|126463827|ref|YP_001044940.1| exodeoxyribonuclease III Xth [Rhodobacter sphaeroides ATCC 17029] gi|126105638|gb|ABN78168.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides ATCC 17029] Length = 255 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 78/302 (25%), Gaps = 71/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++N+N ++ +L ++ + D+V LQE Sbjct: 1 MRIATFNVNGVNG----------------RLPVLLRWLEEARPDVVCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + +Q L G +D +R Sbjct: 35 LKAASARFPAAALEAAGYGAVWHGQKSWNGVAILARGAEPVQTRQDLPGVQDG----ESR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + V ++L + + + L + + V Sbjct: 91 YIEAAV-----EGVLVGCLYLPNGNPAPGPKFAAKLA------WFDHLLNHAEELLRHDV 139 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGDFN L + + Sbjct: 140 PVVLAGDFNVMPTDLDVYRPERWREDALFRPEVRAAFARLLAQGWTDSIRHLYPEDRIYT 199 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +D+ ++ + L D ++ SDH P I Sbjct: 200 FWDYFRNAWERDAGLRLDHLLLSPSLLTRLKGAGV-------DRHVRGWEKASDHAPAWI 252 Query: 301 DY 302 + Sbjct: 253 EI 254 >gi|327405878|ref|YP_004346716.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM 16823] gi|327321386|gb|AEA45878.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM 16823] Length = 323 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 34/317 (10%), Positives = 80/317 (25%), Gaps = 49/317 (15%) Query: 26 LVSWNINTLSEQEGVSLWKNSVK------------RTTSDYTLLRQ---YAKNLDADIVF 70 +V +N+ L + + + R + L + + Sbjct: 10 IVFYNVENLFDTIDDKSLLGNEEFTPEGNKLWDEERYQTKLNRLAEALMFINGSTPLAFG 69 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 + E+ + V + + I H + + A K ++ ++ + Sbjct: 70 MAEIENRKVVEDLIKT---GALAQRDYKIVHYNSEDRRGMDCAFVYDSKFIQSELETRLI 126 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS-LLSQQAQ 189 + +D R + + +I I H S S + + L ++ Sbjct: 127 ITVEDEPH-FRTRDIIHMKAKIGNNSIHFFVNHWPSRREGISESENRRKAAAMTLRREID 185 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK----TIDPNDSLIRFPKEKDSRC 245 L + E ++ GDFN + D + +E Sbjct: 186 ELLN-----AEKNANILVMGDFNDTPDNYSIKTILRAKGQHEQTKGDLINLLIEEHKDGF 240 Query: 246 NANKNLRNKIPIDYFVMDQNAYK-----FLIQESFSEILYN---------------EDDI 285 + R D ++ Q + + + Sbjct: 241 GTTVHQREWDIFDQLIVSQGLLQGQSGLEVQGNNAHIAHRKELVFTFKDGGSKPSATYGG 300 Query: 286 KSRGKRLSDHCPISIDY 302 + SDH P+ ++ Sbjct: 301 DTYHGGYSDHLPVFLNL 317 >gi|325679379|ref|ZP_08158964.1| exodeoxyribonuclease III [Ruminococcus albus 8] gi|324108976|gb|EGC03207.1| exodeoxyribonuclease III [Ruminococcus albus 8] Length = 250 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 68/304 (22%), Gaps = 79/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + K+ DADI +QE A Sbjct: 1 MKLISWNVNGFRACLQKGFE---------------DFFKSADADIFCIQETKMQPDQADF 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ F+S ++ AV KN D Sbjct: 46 SPEGYHKYFHSAV-----------KKGYSGTAVYTKNEPKAVTYGLNGAHTDEGR----- 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++ + + + L Sbjct: 90 -----VITCEYDDFYFVCCYVPNAQNELKRIDYRMEFEDDMRAYLCGLDKL--------K 136 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + F + Sbjct: 137 PVIYCGDLNVAHEEIDLKNPKSNVGNAGFSDQERGKFTELLAAGFADTFRRLYPETTGVY 196 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + + SDHCP+ Sbjct: 197 SWWSYRFNARKNNAGWRIDYFVVSERLMDKVGDSKILT-----------DVMGSDHCPVQ 245 Query: 300 IDYD 303 +D Sbjct: 246 LDIT 249 >gi|237723215|ref|ZP_04553696.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 2_2_4] gi|293372719|ref|ZP_06619101.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|229447737|gb|EEO53528.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 2_2_4] gi|292632528|gb|EFF51124.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] Length = 367 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 40/342 (11%), Positives = 84/342 (24%), Gaps = 71/342 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67 R+VSWNI L + SL + + R + + + Sbjct: 32 SFRVVSWNIENLFDTHHDSLKNDHEYLPDAIRHWNYSRYKKKLADVARVITAIGEWNPPA 91 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 +V L E+ + + + ++ + N I A+ ++ ++L Sbjct: 92 LVGLCEVENDTVLRDLTRRSPLKELSYRYVMTNSPDL---RGIDVALLYQRDLFKLLSSR 148 Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL-LS 185 + R + + + + G + V H S Y + L Sbjct: 149 S--ISIPPFKQHRPTRDLLHVSGLLLAGDTLDVFVCHFPSRSGGAKESEPYRLYVAHILR 206 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT------------------ 227 + + + S +I GDFN Sbjct: 207 TEVDSIMN-----IRSHPQAIIMGDFNDYPTNQSILKILKAEAPPVKTNDLASTTDSANA 261 Query: 228 -----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK-------------- 268 + K K + K +D+ ++ Sbjct: 262 STVTPSSLKLYHLLARKAKSKNFGSYKFRGEWGLLDHLIVSGTLLNQSNHFFTSEEKANV 321 Query: 269 -------FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + + +SDH PI D++ Sbjct: 322 CLLPFLLKDDEKYGDKEPFRTYKGMKYQGGISDHLPIYTDFE 363 >gi|227494321|ref|ZP_03924637.1| exodeoxyribonuclease III; exonuclease III [Actinomyces coleocanis DSM 15436] gi|226832055|gb|EEH64438.1| exodeoxyribonuclease III; exonuclease III [Actinomyces coleocanis DSM 15436] Length = 255 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 35/299 (11%), Positives = 78/299 (26%), Gaps = 66/299 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RLV+WN+N + + + K D D++ +QE Sbjct: 1 MRLVTWNVN----------------SVRTRIDRVIEVLKRWDVDVLAMQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + G + R Sbjct: 35 LKCKPEQFPFERFEEAGYQVEMVGLNQWNGVAIASRVGI-ENVQVSFPGQPEYDGVVEAR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +++ + LD Y + L+D++ + Sbjct: 94 ALGAVC-----SGVEIWSLYVPNGRELDHPHYAYK------LEWLTALRDYMVETM-HDR 141 Query: 204 PFVIAGDFNRKINYLGNNDDFW-----------KTIDPNDSLIRFPKEKDSRCNANKNLR 252 + GD+N D + + I + R + Sbjct: 142 KVALVGDWNVAPFDHDVWDIKAFEGATHVSVPEREAFRAFAEIGMTEVTRERVDNYTYWD 201 Query: 253 N---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ + + D + +GK SDH P+ +D+ Sbjct: 202 YQKLRFPKNEGMRIDFVYASPALTETVTAAHI-------DRDERKGKGASDHVPVIVDF 253 >gi|225016166|ref|ZP_03705370.1| hypothetical protein CLOSTMETH_00081 [Clostridium methylpentosum DSM 5476] gi|224951039|gb|EEG32248.1| hypothetical protein CLOSTMETH_00081 [Clostridium methylpentosum DSM 5476] Length = 253 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 38/299 (12%), Positives = 76/299 (25%), Gaps = 78/299 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + DAD+ +QE A++ Sbjct: 1 MKLISWNVNGLRACLNKGF---------------LDFFQEADADVFCVQETKMQQGQAEL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + S E ++ AV + V + D+ R Sbjct: 46 ALEGYEQFWCSAE-----------KKGYSGTAVFTRIPPVSVAYGIGIPEFDTEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +K +++++ + + + L++ Sbjct: 91 -----VITVEFEKFTLINVYTPNAQRGLTRIDFRMQWEDAFRVYLLRLQE--------SK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N N + + F + Sbjct: 138 PVVVCGDLNVAHNEIDLKNYKTNRGNAGFSDEERGKMTELLQSGLTDSFRYLYPEKTGCY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 IDYF+ + + SDHCPI Sbjct: 198 TWWSYMFNARANNAGWRIDYFLTSDVLKDQIEDSVIYSEVL-----------GSDHCPI 245 >gi|218259778|ref|ZP_03475367.1| hypothetical protein PRABACTJOHN_01026 [Parabacteroides johnsonii DSM 18315] gi|218224906|gb|EEC97556.1| hypothetical protein PRABACTJOHN_01026 [Parabacteroides johnsonii DSM 18315] Length = 253 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 31/303 (10%), Positives = 83/303 (27%), Gaps = 73/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+N L G L ++ D++ LQE Sbjct: 1 MKIITYNVNGLRAAVGKGLP---------------EWLAQEQPDVLCLQETK-------- 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + ++ +A+ + + G R Sbjct: 38 LQPDQYPAEAFEALGYKAWLFSAQKKGYSGVAILSRREP----DHVEYGMGIEKYDNEGR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + V+ ++ S D + + + + ++++ + ++S Sbjct: 94 F-----IRADFGDLSVISVYHPSGTSGDERQ-------AFKMEWLEDFQNYVVELQKSRP 141 Query: 204 PFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD+N + + +D D + Sbjct: 142 KLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLDAGYIDTFRLLNPDKQEYT 201 Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + R IDY ++ + + + + SDHCP I Sbjct: 202 WWSYRFSARAKNKGWRIDYCMVSEPMKAQVEKAYILNEAVH-----------SDHCPAVI 250 Query: 301 DYD 303 + Sbjct: 251 EVS 253 >gi|237743089|ref|ZP_04573570.1| exodeoxyribonuclease III [Fusobacterium sp. 7_1] gi|229433385|gb|EEO43597.1| exodeoxyribonuclease III [Fusobacterium sp. 7_1] Length = 253 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 82/306 (26%), Gaps = 80/306 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + + Y +ADI LQE +A Sbjct: 1 MKLISWNVNGIRA---------------AIKKGFLDYFNEQNADIFCLQETK-LSAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + G R Sbjct: 45 LELKGYHQYWNYAEKKGY----------SGTAIFTKQEPLSVS----YGLGIEEHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +K +++ ++ + + ++ ++ Sbjct: 91 -----VITLEFEKFYMVTVYTPN-------SKDELLRLDYRMIWEDEFRKYLKNLEKKK- 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + + + F + Sbjct: 138 PVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKFTELLDSGFIDTFRYFYPNLEQVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + K L+ + SDHCP+ Sbjct: 198 SWWSYRGRARENNAGWRIDYFVVSKELEKNLVDAEIHTQI-----------EGSDHCPVV 246 Query: 300 --IDYD 303 +D D Sbjct: 247 LFLDLD 252 >gi|297154471|gb|ADI04183.1| hypothetical protein SBI_01062 [Streptomyces bingchenggensis BCW-1] Length = 297 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 34/282 (12%), Positives = 78/282 (27%), Gaps = 35/282 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R++++N+ S+ E +R+ + ++ QE Sbjct: 41 LRVMTFNLRFASDTE--------PNSWAQRRPAMRELLRREAPQLLGTQEGLYGQLRDIA 92 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + T R T + P + +++ A R Sbjct: 93 HDLGPRYDWLGTGRAGGSRDEFMAVFYDTNRLEPLEYDHFWLSDTPYVIGSNTWGGAVVR 152 Query: 144 RAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + G + + L+ HL S + A + + + ++ Sbjct: 153 MVTWVRFHDLRTGGQFYALNTHLDH------------RSQPARERAAALITERL-GGLDA 199 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWK--TIDPNDSLIRFPKEKDSRCNANKNLRNKI-PID 258 +P ++ GDFN + D T+ + + + + + L ID Sbjct: 200 ALPRIVTGDFNVAAHGNPVYDAMLGGGTLVDSWDAAERRSAQYATFHGYRPLVPDGDRID 259 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + + + G+ SDH P+ Sbjct: 260 WILTSP---------TVHTHYAAINPYSRDGQFPSDHLPVQA 292 >gi|153839526|ref|ZP_01992193.1| nuclease [Vibrio parahaemolyticus AQ3810] gi|149746952|gb|EDM57940.1| nuclease [Vibrio parahaemolyticus AQ3810] Length = 632 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 42/382 (10%), Positives = 94/382 (24%), Gaps = 96/382 (25%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT---------SDYTLLRQYAKNLD 65 A +R+ S+N+ S N + + +D Sbjct: 114 AAPAIAESDLRVASFNVLNYFTSVADSGNNNPTGQNRGATNHDEFLIQQAKIVSAMNKMD 173 Query: 66 ADIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIH 111 ADI+ L E+ + +AV + + + ++ + ++ I Sbjct: 174 ADIIGLMEVENNGFGDGSAVQNLVDALNAEIDDADDHYTYVEIADKDKYQEEYFGSDAIM 233 Query: 112 TAIAVRKKNVR----------------VLQQSYPLLGAKDSFSRAGNRRAVELLVEI--N 153 AI R K V + + R ++ + + Sbjct: 234 VAILYRAKVVTPKEAAKVIFTPEQHIAENTITRKDGAESNPAYDKYQRHSLLQTFTVQES 293 Query: 154 GKKIWVLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 G+ + ++ H KS + + A + + + K Sbjct: 294 GEDLSIVVNHFKSKGSECIEEWIAGVEDSEPADLQGNCNNFRVSAAHAVGEALKDVKGD- 352 Query: 203 VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSL------------- 234 ++ GD N + TI+ + Sbjct: 353 --VLLMGDLNAYGMEDPLLTLTDYSKEKYGRDIYTAGYTTINGGELQVEQTQIKQGYGLN 410 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291 + + +D+ + + + ++ I E ++ G + Sbjct: 411 NLNTLLHGTDTFSYTYSGELGNLDHALASNSLAQKVVAIEDWHINSLESNLFEYGSKYTG 470 Query: 292 ----------LSDHCPISIDYD 303 SDH P+ I D Sbjct: 471 DMPKYKDAFSASDHDPVIIAID 492 >gi|148235150|ref|NP_001082408.1| similar to deoxyribonuclease I-like 3 [Xenopus laevis] gi|49118064|gb|AAH73008.1| LOC398451 protein [Xenopus laevis] Length = 295 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 84/304 (27%), Gaps = 37/304 (12%) Query: 9 LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DA 66 L+F C A +R+ S+N+ + E T D + + + Sbjct: 4 LLFLCAICV-PDALGLRICSFNVQSFGE-------------TKRDKPAVMNVVRMIISRC 49 Query: 67 DIVFLQEMGSYNA-----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 DI L E+ + + + R S + + RK V Sbjct: 50 DITLLMEIKDSSDTVIRSLMTQLNSQPETRNQFDLTISQRLGRKSYKEQY-GFIYRKNLV 108 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 V +++Y + + A +R + + + I + + E Sbjct: 109 SV-KETYQYMDLQPGDEDAFSREPYVVWFQAPSTDVKEFVIIPQH----TTPEAAVREID 163 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 L + W F+ GD N +Y+ + + + + Sbjct: 164 ELYDVYLDVKEKW------DSENFIFMGDLNAGCSYVPKKSWKNIRLRNHTEFVWLIGDN 217 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPIS 299 + I V+ ++ S S + + + L SDH P+ Sbjct: 218 KDTTVKSSTNCAYDRI--VVVGDKLISSIVPASASVFDFMAAYGLTEEQALEVSDHFPVE 275 Query: 300 IDYD 303 + Sbjct: 276 VQLT 279 >gi|148229324|ref|NP_001079750.1| deoxyribonuclease I-like 3 [Xenopus laevis] gi|3757883|gb|AAC64266.1| deoxyribonuclease gamma [Xenopus laevis] Length = 295 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 85/301 (28%), Gaps = 34/301 (11%) Query: 10 VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DAD 67 + L + +R+ S+N+ + E + D + + + D Sbjct: 4 LLLLCALFVPHSLGLRICSFNVQSFGE-------------SKRDKPAVMNVVRKIISRCD 50 Query: 68 IVFLQEMGS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH--TAIAVRKKNVRV 123 I L E+ + + + + + S+R RK V V Sbjct: 51 ITLLMEIKDSSNTVIRLLMAQLNSQSETRNQFDLTISQRLGRKSYKEQYGFIYRKNLVSV 110 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + +Y + A +R + + ++ I + + E L Sbjct: 111 -KGTYQYKDLQPGDEDAFSREPYVVWFQAPSTEVKEFVIVPQH----TTPEAAVREIDEL 165 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + W + F+ GD N +Y+ + + + + + Sbjct: 166 YDVYLDVKQKW------NSENFIFMGDLNAGCSYVPKKSWKNIRLRNHTEFVWLIGDNND 219 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISID 301 + I V+ + ++ S + + + + L SDH PI + Sbjct: 220 TTVKSSTNCAYDRI--VVVGEKLVSSIVPGSANVFDFMVAYGLTEEQALEVSDHFPIEVR 277 Query: 302 Y 302 Sbjct: 278 L 278 >gi|319791365|ref|YP_004153005.1| exodeoxyribonuclease iii xth [Variovorax paradoxus EPS] gi|315593828|gb|ADU34894.1| exodeoxyribonuclease III Xth [Variovorax paradoxus EPS] Length = 263 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 83/303 (27%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N ++ L ++ D+ LQE+ S +A Sbjct: 4 MKIATFNVNGINS----------------RLARLLEWLDESKPDVACLQELKSPDAA--- 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + R + +A+ + + L G + + +R Sbjct: 45 -------LPVDAIRGAGYGIVAHGQRAWNGVAILARGREPIDTGRGLPGME---ADTQSR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + V ++L + + Y Q + + S + Sbjct: 95 YIEAVV-----GGVLVGCLYLPNGNPQPGPKFDYK------LQWFEAFNRHAKKLFSSGM 143 Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPND-SLIRFPKEKDSRCN 246 P V+AGD+N + F + + IR Sbjct: 144 PVVLAGDYNVVPTDADIYNPASWRDDALLQPESRAAFAQLLKQGWTDAIRATHPDRVPFT 203 Query: 247 ANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 RN+ ID+ +++ L D SDH P I Sbjct: 204 FWTYWRNRYPRDAGLRIDHLLLNAELAPMLRSAGV-------DRDVRGRTGASDHAPAWI 256 Query: 301 DYD 303 + D Sbjct: 257 ELD 259 >gi|299538266|ref|ZP_07051551.1| exodeoxyribonuclease [Lysinibacillus fusiformis ZC1] gi|298726468|gb|EFI67058.1| exodeoxyribonuclease [Lysinibacillus fusiformis ZC1] Length = 251 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 83/303 (27%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N + G ++ +DAD +QE A V Sbjct: 1 MKFISWNVNGIRACLGKGF---------------LEFFHQIDADFFCIQETKC-QAGQVV 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + + A+ K+ + + G S+ R Sbjct: 45 LSIEGYEQYWNYAQKKGY----------SGTAIFTKHTPLSVK----YGVGAEDSQDEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + K ++++++ + + L+ Q L Sbjct: 91 I-----ITLEYKNFYLVNVYTPNAQRDLARLPLRLQWEDRLANYLQELN--------CQK 137 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V GD N + + + + + F + + Sbjct: 138 PVVYCGDLNVAHTEIDLKNAKSNIGNSGFTYEERAKFSALLESGFVDSFRYKHPEETDHY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYFV+ + + + + SDHCPI Sbjct: 198 TWWSYMNKVRERNIGWRIDYFVVSNQLKEQIESATIHPHI-----------MGSDHCPIE 246 Query: 300 IDY 302 + Sbjct: 247 LQL 249 >gi|225376286|ref|ZP_03753507.1| hypothetical protein ROSEINA2194_01924 [Roseburia inulinivorans DSM 16841] gi|225211932|gb|EEG94286.1| hypothetical protein ROSEINA2194_01924 [Roseburia inulinivorans DSM 16841] Length = 255 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 33/303 (10%), Positives = 74/303 (24%), Gaps = 78/303 (25%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + ++ +SWN+N L + +DAD +QE Sbjct: 3 KTMKFISWNVNGLRACMQKGF---------------LDFFNEVDADFFCVQETKLQEG-Q 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F++ + + A+ K+ + + D R Sbjct: 47 IALDLPGYHQFWNYAEKKGY----------SGTAIFTKHEPLSVSYGIGIPEHDHEGR-- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 ++ + +++ + + + + L + Sbjct: 95 -------VITLEYDAFYLVTCYTPNSQNELARLPYRMQWEEDFLAFLKRL--------DE 139 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + P ++ GD N T+ + F + Sbjct: 140 VKPVIVCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKMTTLLNSGFTDTFRYFYPDKEG 199 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDYF+ + + L +Y SDHCP Sbjct: 200 IYSWWSYRFKAREKNAGWRIDYFITSRCLDEKLQSAGIHTEVY-----------GSDHCP 248 Query: 298 ISI 300 + + Sbjct: 249 VEL 251 >gi|148284900|ref|YP_001248990.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Boryong] gi|148285144|ref|YP_001249234.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Boryong] gi|146740339|emb|CAM80757.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Boryong] gi|146740583|emb|CAM81209.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Boryong] Length = 261 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 32/306 (10%), Positives = 72/306 (23%), Gaps = 72/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++++WNIN LL++ + DI+ LQE ++ Sbjct: 1 MKIITWNIN----------------SIRIRIHLLQKLVHLYNPDIIALQE---TKVEDRL 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP L S + +A+ + L + Sbjct: 42 FP------VTECINLGYKYITYSGQKSYNGVAILSRISFESTFVINLYNDEKR------- 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + IN ++ + + ++ + D + + ++ W K Sbjct: 89 -----HIAINIGELSIHNFYVPAG--GDIPDANVNIKFKHKLCYVDFMNAWFLNNKSKKD 141 Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N I D + Sbjct: 142 KIILLGDLNIAPLESDVWSSYQLRNVVSHTDIERKKLMHNITSFDWIDAVRFFSGKHEKL 201 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + SDH P Sbjct: 202 YSWWSYRNIDWSKSDRGRRLDHIWISHPLESKIKSCIII-------KDARGWDMPSDHVP 254 Query: 298 ISIDYD 303 + ++ + Sbjct: 255 VMLEIE 260 >gi|15639533|ref|NP_218983.1| hypothetical protein TP0544 [Treponema pallidum subsp. pallidum str. Nichols] gi|3322837|gb|AAC65531.1| predicted coding region TP0544 [Treponema pallidum subsp. pallidum str. Nichols] gi|291059921|gb|ADD72656.1| endonuclease/exonuclease/phosphatase family [Treponema pallidum subsp. pallidum str. Chicago] Length = 622 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 38/351 (10%), Positives = 88/351 (25%), Gaps = 79/351 (22%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 V A+ + + S+N+ S R K D++ L E Sbjct: 291 VSTIQFNARFLNIASYNVENFSAGNKAD-----SARARVFAKHFVNDLKA--PDVICLVE 343 Query: 74 MGSYNAVAK---------------------------VFPKNTWCIFYSTERLINHSKRDS 106 + + K + + + ++ Sbjct: 344 IQDDDGAKKHHHCTSAQHTLDLLVRAMAEFSAVRYKAVNIDPQDNAPAGVQSLDADGGQP 403 Query: 107 NNDIHTAIAVRKKNVRVLQ----------------------QSYPLLGAKDSFSRAGNRR 144 +I R V+++Q P S R+ Sbjct: 404 GGNIRCCYLYRTDRVQLVQDQTGSAGTFHSVAQMVRGGRQMVKNPARIGVGQESFQNTRK 463 Query: 145 AVELLVEI-----NGKKIWVLDIHLKSFCFLDSLENTYSPSC------SLLSQQAQWLKD 193 ++ + GK V+ H S D + + P+ + Sbjct: 464 SLVAHFQFVSGVNKGKDFVVVTNHFSSKRGDDPVWGSTQPAQEHSKRKRIQQAAQVAAFV 523 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 +++ + +P V+AGDFN + ++ Sbjct: 524 AALRRERADLPVVVAGDFNDFWFSDVI-----QKFTAVGMHSALDLLPETERYTYVYRGY 578 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +D + + + + + + + + +R+SDH P+ + + Sbjct: 579 SQTLDNIL-------SVGARTETADILHINAEQPARERVSDHDPVFVQLSW 622 >gi|319441976|ref|ZP_07991132.1| exodeoxyribonuclease III [Corynebacterium variabile DSM 44702] Length = 293 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 42/320 (13%), Positives = 82/320 (25%), Gaps = 73/320 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ + N+N + + + D D++ +QE+ A Sbjct: 2 LRIATANVNGIRA---------------AQRRGFGDWLDARDCDVIAVQEV---RAQPDK 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P++ + ++ N +AV K V +++ + R Sbjct: 44 IPEDAFGNYHVALETGNIPG-------RNGVAVLTKTPPVAVRTWSDGSDRVPLPRKLRP 96 Query: 144 RA---VELLVEINGKKIWVLDIHLKSFCFL------------DSLENTYSPSCSLLSQQA 188 + V++ + V ++L Y L+ Sbjct: 97 FIPQGRYIEVDLADAPVTVACLYLPKGGLPAEMQRPERMREAPDGGARYERKMGFLAGFG 156 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPND 232 ++L F++ GD N + F + + P Sbjct: 157 RYLTATRRAALAEGREFLLMGDMNIAHTRHDLTHWRRNQSHDGFLPEEREWFDRQLSPRT 216 Query: 233 SLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + IDY + + Sbjct: 217 LVDVVRSLHPDEDGPYSWWSWAGQSFAKDAGWRIDYHLATPRLARTATSAGV-------- 268 Query: 284 DIKSRGKRLSDHCPISIDYD 303 D RG RLSDH P+ +DYD Sbjct: 269 DRDFRGMRLSDHSPVVVDYD 288 >gi|307823885|ref|ZP_07654113.1| exodeoxyribonuclease III Xth [Methylobacter tundripaludum SV96] gi|307735179|gb|EFO06028.1| exodeoxyribonuclease III Xth [Methylobacter tundripaludum SV96] Length = 254 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 35/308 (11%), Positives = 84/308 (27%), Gaps = 81/308 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++SWN+N + + + LDAD + LQE + Sbjct: 1 MKIISWNVNGVRAVQSKGF---------------AETLALLDADCILLQETKAQADQIDK 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + ++ + + ++ + + + + S + D R Sbjct: 46 ALEGIDGYRVYSN----------CAERKGYSGVTILSRKEPLQVISDIGIVEHDREGR-- 93 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 ++ + ++L++++ + + + + L+ Sbjct: 94 -------VIVAEFENFFLLNVYVPNSGEALARLDYRQTWDIEFLAYCRQLQK-------- 138 Query: 202 LVPFVIAGDFNRKINYLGNNDDF----------------WKTIDPNDSLIRFPKEKDSRC 245 P + GDFN + + + F Sbjct: 139 KKPLIACGDFNVAHQEIDIARPKPNYNKSAGYTQVEIDGFSRFLDAGLVDTFRHFH-PDT 197 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 A + IDY + + + Q + SDHC Sbjct: 198 VAYSWWSFRGGARARNVGWRIDYVLTSKTLAGNVKQAFILPEIS-----------GSDHC 246 Query: 297 PISIDYDF 304 P+ I+ DF Sbjct: 247 PVGIEIDF 254 >gi|299067259|emb|CBJ38456.1| conserved protein of unknown function, endonuclease/exonuclease/phosphatase family [Ralstonia solanacearum CMR15] Length = 289 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 86/306 (28%), Gaps = 54/306 (17%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGS-------- 76 +++WNI +G D + + A + D++ LQE+ S Sbjct: 5 ILTWNIQWGRGADG-----------RVDLSRMLAEAHAMGPFDVLCLQEVTSGFDHLPGQ 53 Query: 77 --YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + ++ ++ I + + + A+ + + + L Sbjct: 54 PGEDQWQELAGALGQA--FTLIGGIALERHEGAHIQRFGNAIATRLPVLHVARHALPCPA 111 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D+ R A+E +V+ + V+ HL+ + + + + + Sbjct: 112 DA-GPTMPRMAIEAIVQAPFGPLRVVSTHLEYYSETQRIAQIDALRALHVEGCMRAAHPP 170 Query: 195 ITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + + PF VI GDFN K + +L + Sbjct: 171 TLGPEPTDGPFRPLAQTRATVICGDFNCKPDSTPKRLVTVPFSHEVATLYDAWETAHGPT 230 Query: 246 NANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 D+ ++ + + + + SDH Sbjct: 231 PQPPTFGVHDRTGWTEPAYACDFMLVSAPLKTRVARVEVN-----------SATQASDHQ 279 Query: 297 PISIDY 302 P+ ++ Sbjct: 280 PMLLEL 285 >gi|294790372|ref|ZP_06755530.1| exodeoxyribonuclease III [Scardovia inopinata F0304] gi|294458269|gb|EFG26622.1| exodeoxyribonuclease III [Scardovia inopinata F0304] Length = 276 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 31/305 (10%), Positives = 73/305 (23%), Gaps = 55/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VSWNI++L+ ++ R + + + +++ +QE Sbjct: 1 MKFVSWNIDSLNAALLGKSDRSVQSR------QVLASIRGENPEVIAIQETKLPATGPSK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F+ + S + + K L R Sbjct: 55 KHLTALSQFFDDYDVHWRSSVEPARKGYAGTMCLSKKGLPLVAVTEPRIHSPEPMDCEGR 114 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E ++++++ + + L + Sbjct: 115 ---LQTLEFPD--FYLVNVYTPNSGDGLRRLSDRQLWDDAYRAYLTEL--------DEAK 161 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GDFN + + + ++ A Sbjct: 162 PILACGDFNVAHQEIDLAHPASNHHSAGFTDEERQKFTALLGAGFTDTYRYLHPNQAGAY 221 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY+++ + Q + + DH PI Sbjct: 222 TWWAQRAVTSKANNSGWRIDYWLVSNRLNSRVKQSTMIDTGDRR-----------DHAPI 270 Query: 299 SIDYD 303 +D Sbjct: 271 LLDIT 275 >gi|288803465|ref|ZP_06408897.1| AP endonuclease domain protein [Prevotella melaninogenica D18] gi|288334075|gb|EFC72518.1| AP endonuclease domain protein [Prevotella melaninogenica D18] Length = 366 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 45/335 (13%), Positives = 92/335 (27%), Gaps = 79/335 (23%) Query: 2 IRKYVLALVFFLV---------PCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKR 49 +R L L+ FL+ P + ++++S+N+ S KN Sbjct: 67 LRTIWLPLLGFLLCYGPIRTYSPFNIPEDKPHGAIKVLSYNVFMFSSWSEPDAKKNP--- 123 Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 + Y ADIV LQE + + + +I + Sbjct: 124 -------IVDYIVKSKADIVCLQEAQATLEDKDHIYSTLKKHYPYFKLMIKKAPGADY-- 174 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 + + K + Q + P + + ++I G V++ H +S Sbjct: 175 ----MVLLSKYPILWQDTIPYGSSSNQSVAYM--------LDIKGTNTLVVNNHFESNGL 222 Query: 170 LDSLEN------------------------TYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + + + QA+ + ++ + + VP Sbjct: 223 SSGDKEGFKTLVKGELKTGEAKRQSVHLITKLGDVSARRAPQAETVARYVKKYLDKKVPV 282 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 ++ GDFN + K ++ F + + + ID+ + Sbjct: 283 ILCGDFNDSP-LSYTHRTIAKELND-----CFVESGNGPGISYHKSGMYFRIDHIFRSDD 336 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + SDH PI Sbjct: 337 FESY----GAKVDNSVTT---------SDHYPIYC 358 >gi|156551960|ref|XP_001602349.1| PREDICTED: similar to neutral Sphingomyelinase, putative [Nasonia vitripennis] Length = 404 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 78/286 (27%), Gaps = 22/286 (7%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 ++ N+ TL+ + KN V R + + D DIV LQE+ S + + K Sbjct: 5 LTLNVLTLNCWGIPYVSKNRVNR----MNAIADKLMSEDYDIVCLQEVWSIDDFRLIRAK 60 Query: 87 NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146 + YS I + L + D G + Sbjct: 61 TQDKLPYSHYFFSGVVGSGICIFSRYCIGDVMFHKWTLNGYVHKIHHGD---WFGGKGVG 117 Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206 ++ I V HL + + QA +I + + Sbjct: 118 LCRIQAQNVHINVYVAHLHA-----EYCRENDEYNAHRVMQAFDTAQFIRMTRGGADAVI 172 Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI--------PID 258 + GD N + L + S C N ++ ID Sbjct: 173 LGGDLNTEPQDLAFRIICGIAELSDACSKDANSLGTSECAKNSYTDLRVARKIPQGKRID 232 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + + FS + + SDH + + F Sbjct: 233 HILYLGSKRYKVDVSEFSHPFPT--RVPDKTFSYSDHEAVMASFKF 276 >gi|257457683|ref|ZP_05622850.1| endonuclease/exonuclease/phosphatase family protein [Treponema vincentii ATCC 35580] gi|257445069|gb|EEV20145.1| endonuclease/exonuclease/phosphatase family protein [Treponema vincentii ATCC 35580] Length = 350 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 103/361 (28%), Gaps = 72/361 (19%) Query: 1 MIRKYVLALVF-------FLVPCT-------ASVAQKVRLVSWNINTLSE---------Q 37 M K +L +F + CT + V LV++N T + + Sbjct: 1 MKLKRLLVPLFACIAAGVIFLQCTRCTPLTDTQFKEPVTLVTYNTQTFFDAVEDGTEFKE 60 Query: 38 EGVSLWKNSVKRTTSDYTLLRQYAKNLD----------ADIVFLQEMGSYNAVAKVFPKN 87 S + + ++ + L+ DIV LQE+ + V + Sbjct: 61 YKGSKSQWTEQKYRTRLERLKHTVFAAGEKLTGKKDRLPDIVVLQEIENDRVVEDFCKQL 120 Query: 88 TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE 147 ++ ++ + + K + L + R + Sbjct: 121 P------SKENYPYAVCPPASKSAFTTVILSKYPVEQFFVHRLYTDQKISLRPLTEAVLN 174 Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV--PF 205 + + + V +H KS S ++ + Q L I + +E PF Sbjct: 175 TGSKDKPQLLTVFAVHWKSKTGSSD-------SAAVRALQEAQLMQKIREHREKNPQIPF 227 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM--- 262 V+ GDFN+ + DD D D + + + ID+ Sbjct: 228 VVCGDFNQTLEEFNQLDDLAVCWDGADYRTESEEGIQPD-GSYYFKGSWEKIDHIFYESG 286 Query: 263 ---DQNAYKFLIQES----FSEILYNEDDIKS-------------RGKRLSDHCPISIDY 302 ++ F ++ + + GK SDH P+ + Sbjct: 287 ADGSGDSDAFYTGDAGAAYIEPLSFFVLYEPPLIEDGKPVRYNVVSGKGYSDHLPLGFRF 346 Query: 303 D 303 + Sbjct: 347 E 347 >gi|284033955|ref|YP_003383886.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283813248|gb|ADB35087.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 269 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 31/286 (10%), Positives = 76/286 (26%), Gaps = 59/286 (20%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--------Y 77 ++++NI+ +GV + + A +V LQE+ Sbjct: 34 VMTYNIHHAQGVDGVL-----------NLERIATVIAQSGAAVVGLQEVDVHWSERSNWQ 82 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 N A + + ++ ++ + A+ + + L Sbjct: 83 NQAAWLATRLGMEYRFAANLDLDPLVPGEPRRQY-GTAILSRYPITSFSNTLLP----LH 137 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 + + R +++ G+ + HL + + +Q+Q + + Sbjct: 138 AGSEQRGLAVATIDVAGRDVRFATTHL------------SKLTSAERVEQSQRIVQLL-- 183 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 S P ++ GD N + + F + I Sbjct: 184 -AGSTTPTLLTGDLNAVPTAPEIKHLT-TVLKDTWPEVGFGLGLTNPAVL-----PLRRI 236 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 DY + + + + DH P+ ++ Sbjct: 237 DYVLHSTDFRAKSARTPITHAA--------------DHLPVVATFE 268 >gi|47522808|ref|NP_999156.1| deoxyribonuclease-1 precursor [Sus scrofa] gi|62512132|sp|P11936|DNAS1_PIG RecName: Full=Deoxyribonuclease-1; AltName: Full=Deoxyribonuclease I; Short=DNase I; Flags: Precursor gi|15027532|dbj|BAB62268.1| deoxyribonuclease I [Sus scrofa] Length = 284 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 39/284 (13%), Positives = 85/284 (29%), Gaps = 32/284 (11%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AVAK 82 R+ ++NI T E + + + DI +QE+ + AV K Sbjct: 24 RIAAFNIRTFGET---------KMSNATLSNYIVRILSRY--DIALIQEVRDSHLTAVGK 72 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + +++ S R V VL G + + N Sbjct: 73 LLNELNQDDPNNYHHVVSEPLGRSTYKERYLFVFRPDQVSVLDSYLYDDGCEPCGNDTFN 132 Query: 143 RRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + ++ + L + + E L +Q L+D Sbjct: 133 REPSVVKFSSPSTQVKEFAIVPLHAAPSDAAAEIDSLYDVYLNVRQKWDLED-------- 184 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 ++ GDFN +Y+ + + + + ++ + D V Sbjct: 185 ---IMLMGDFNAGCSYVTTSHWSSIRLRESPPFQWLIPDTADTTVSSTHCAY----DRIV 237 Query: 262 MDQNAYKF-LIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302 + + ++ +S + + S +SDH P+ + Sbjct: 238 VAGPLLQRAVVPDSAAPFDFQAAFGLSEQTALAISDHYPVEVTL 281 >gi|224139930|ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|118486421|gb|ABK95050.1| unknown [Populus trichocarpa] gi|222867975|gb|EEF05106.1| predicted protein [Populus trichocarpa] Length = 603 Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 40/348 (11%), Positives = 88/348 (25%), Gaps = 64/348 (18%) Query: 19 SVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 S + ++S+NI + + + S + L + ADIV LQE+ S Sbjct: 248 SSSGTFTVLSYNILSDVYATNDTYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQS 307 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL----- 131 + P+ + + + + + N A + R + Sbjct: 308 DHYEEFFAPELDKHGYQALYKRKTNEVYNINTHTIDGCATFFRRDRFSHVKKYEVEFNKA 367 Query: 132 --GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT------------Y 177 D+ + R+ + + + V+ S D+ + Sbjct: 368 AQSLTDALVPSAQRKTALNRLVKDNVALIVVLEAKFSNQGADNPGKRQLLCVANTHINVH 427 Query: 178 SPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + Q L + + + +P ++ GDFN ++ +D + Sbjct: 428 QDLKDVKLWQVLTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHSLLAMGKVDQLHPDLV 487 Query: 237 FPKE-----------------------------------------KDSRCNANKNLRNKI 255 + N Sbjct: 488 VDPLGILRPHSKLTHQLPLVSAYSSFARVGVGLGSDQQRRRMDATTNEPLFTNCTRDFIG 547 Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +DY + + E E +D + SDH + ++ Sbjct: 548 TLDYIFYTADSLTVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 595 >gi|325269387|ref|ZP_08136004.1| exodeoxyribonuclease III [Prevotella multiformis DSM 16608] gi|324988308|gb|EGC20274.1| exodeoxyribonuclease III [Prevotella multiformis DSM 16608] Length = 249 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 85/302 (28%), Gaps = 77/302 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L G Q K LDAD LQE A Sbjct: 1 MKLISWNVNGLRACVGKDFE---------------QQFKALDADFFCLQETK-MQAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ ++ ++ A+ K+ + + D R Sbjct: 45 ISFPGYTSYWN----------YADKKGYSGTAIFTKHKPLDVTYGIGMDEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + + + ++++ + Sbjct: 91 -----VITLEMDDFYLVTVYTPN-------SQDGLRRLDYRMKWEKDFQNYL-HWLDEKK 137 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P V+ GD N + + +D + + Sbjct: 138 PVVVCGDMNVAHEEIDIKNPKTNRRNAGFTDEEREKMTQLLDSGFIDTFRSLYPEQVTYS 197 Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + R + IDYF++ + L + SDHCPI + Sbjct: 198 WWSYRFRARERNTGWRIDYFLISERLRDRLEDAKIHTEI-----------MGSDHCPIEV 246 Query: 301 DY 302 D Sbjct: 247 DL 248 >gi|229062743|ref|ZP_04200048.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603] gi|228716503|gb|EEL68206.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603] Length = 352 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 107/327 (32%), Gaps = 70/327 (21%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI G +S ++T ++ + + +N ++D Sbjct: 50 APGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109 Query: 71 LQE----------MGSYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAI 114 LQE + + + K P + + + N + Sbjct: 110 LQETDIKSMRSFDVNGHEFLKKGLPDYASSFGKNYDTKWVPVPITNPMGYA-----EAGL 164 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKI-WVLDIHLKSFCFLD 171 + K + + L G + R + R VE + +N K ++++HL + Sbjct: 165 STFSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHKIPVNNGKFVRLVNLHLSA----- 219 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 Y + QQ ++LK ++ + E+ ++ GD+N+ ++ + +D + P Sbjct: 220 -----YDEGGKIRKQQVEYLKKYMNKHYENGDYVIMGGDWNQLLSNVQLSDPKFVKERPE 274 Query: 232 DSLIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESF 275 + D + ID F++ N ++ Sbjct: 275 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQG 332 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + SDH P+S + Sbjct: 333 KDLKFEN----------SDHNPVSAVF 349 >gi|114660657|ref|XP_001168176.1| PREDICTED: deoxyribonuclease I isoform 3 [Pan troglodytes] gi|332845211|ref|XP_001168207.2| PREDICTED: deoxyribonuclease-1 isoform 4 [Pan troglodytes] gi|332845213|ref|XP_510773.3| PREDICTED: deoxyribonuclease-1 isoform 5 [Pan troglodytes] Length = 282 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 37/283 (13%), Positives = 85/283 (30%), Gaps = 30/283 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AV 80 +++ ++NI T E + + + Q DI +QE+ + AV Sbjct: 22 SLKIAAFNIQTFGET---------KMSNATLVSYIVQILSRY--DIALVQEVRDSHLTAV 70 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K+ + +++ ++ R V + Y G + + Sbjct: 71 GKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYDDGCEPCGNDT 130 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 NR + ++ I D++ + L Q +W Sbjct: 131 FNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW---------- 180 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 L ++ GDFN +Y+ + + + + + + D Sbjct: 181 GLEDVMLMGDFNAGCSYVRPSQWSSIRLRTSPAFQWLIPDSADTTATPTHCAY----DRI 236 Query: 261 VMDQNAYK-FLIQESFSEILYNEDDIKSR--GKRLSDHCPISI 300 V+ + ++ +S + S + +SDH P+ + Sbjct: 237 VVAGMLLQGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEV 279 >gi|84385765|ref|ZP_00988795.1| hypothetical protein V12B01_12100 [Vibrio splendidus 12B01] gi|84379081|gb|EAP95934.1| hypothetical protein V12B01_12100 [Vibrio splendidus 12B01] Length = 347 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 40/336 (11%), Positives = 93/336 (27%), Gaps = 59/336 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + ++N+ E S + + ++LD D++ QE+ S ++ Sbjct: 7 ITFATFNLLNYLEPPNAYYDFENIYSFDEWQKKQHWMAETIRSLDCDVIGFQEIFSPQSL 66 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137 ++ + + F + IA R V + L S Sbjct: 67 EQLMNELGYPYFAVVDSAHVEDDYL-YTSPVVGIASRYPIENVQPVTPDSKLLKAFNLSD 125 Query: 138 SRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ------- 187 + + NR V + + +V+ + + + Q Sbjct: 126 NFSFNRTPVHATITLPHLGSTDCYVVHFKSQRPTEPRTESVDSDNAQQGAKPQSDTLTRF 185 Query: 188 -----------------AQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTI 228 AQ L +I + ++ P V+ GDFN+ + + + Sbjct: 186 HQEQLGSWLSSVQRGLEAQMLHQYITNHRYQTDQPVVLMGDFNKPLFHDEFKGLLSYAIN 245 Query: 229 DPNDSLIRFPKEKDSRCN-----------------ANKNLRNKIPIDYFVMDQNA----- 266 +S + + + +DY +M Sbjct: 246 RDENSKHWLSHFRLKDSWDLYHQLHEEDLLEQRKPTHYYGASGSVLDYILMSNEFDCQNS 305 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLS-DHCPISID 301 + S++ + ++ + + S DH +S+ Sbjct: 306 SSLMEMSSYTVLDHHLINPSFEHDQFSTDHAIVSVT 341 >gi|126662905|ref|ZP_01733904.1| exodeoxyribonuclease III [Flavobacteria bacterium BAL38] gi|126626284|gb|EAZ96973.1| exodeoxyribonuclease III [Flavobacteria bacterium BAL38] Length = 253 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 38/307 (12%), Positives = 92/307 (29%), Gaps = 83/307 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA---- 79 ++++S+N+N + ++ + + D++ LQE+ + Sbjct: 1 MKIISYNVNGIRAAISKGF---------------LEWLQQANPDVICLQEIKATEEQIPK 45 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + ++S E ++ +AV K + G Sbjct: 46 LEIEAAGYPYQYYFSAE-----------KKGYSGVAVLSKIEP----KTIVFGTGIKHMD 90 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + ++ K+ V+ ++L S +D L+ + + ++ + K Sbjct: 91 FEGRN-----LRVDFDKLSVMSLYLPSGTNIDRLDYKFQ--------YMAEFQLYVDELK 137 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSR 244 + + VI GD+N + +D N + F Sbjct: 138 KEIPNLVICGDYNICHEAIDIHDPIRNAKVSGFLPEERAWLDGFLKNGFVDTFRHLNKEP 197 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 N + IDY + ++ + + + + SDH Sbjct: 198 -NNYSWWSYRANARNNNKGWRIDYCLATESLKEKIQRALIL-----------PEAKHSDH 245 Query: 296 CPISIDY 302 CP+ ++ Sbjct: 246 CPVLVEI 252 >gi|108762443|ref|YP_632150.1| exodeoxyribonuclease III [Myxococcus xanthus DK 1622] gi|108466323|gb|ABF91508.1| exodeoxyribonuclease III [Myxococcus xanthus DK 1622] Length = 260 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 80/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81 +R+VSWN+N L + A +V LQE+ + Sbjct: 1 MRVVSWNVNGLRSVHRKGFLP---------------WLAGCRAQVVGLQEVRARADQLPD 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 V + W + + + + + + + +G D R Sbjct: 46 DVRSPSRWKTHFVAAERPGY----------SGVGLYSRLEPDEVVTVLGVGELDVEGRLQ 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 K+ V++ + + D + L + + + Sbjct: 96 I---------ARFGKLTVVNGYFPNGNGKD----RDLSRIPYKLTFYRRLFERLEKPLRD 142 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ GDFN ++F + I K Sbjct: 143 GGRVLVMGDFNTAHQEIDLARPKENRETSGFRPEEREEFDRWIRAGWVDTFRHFNKGGGN 202 Query: 246 NANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + R IDY + A ++ + + SDHCP+ Sbjct: 203 YSWWSQRAGVREKNIGWRIDYVLASPAAMAYVRKAGIHPDVL-----------GSDHCPV 251 Query: 299 SIDYD 303 S+D D Sbjct: 252 SVDLD 256 >gi|301063079|ref|ZP_07203640.1| endonuclease/exonuclease/phosphatase family protein [delta proteobacterium NaphS2] gi|300442799|gb|EFK07003.1| endonuclease/exonuclease/phosphatase family protein [delta proteobacterium NaphS2] Length = 333 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 89/328 (27%), Gaps = 57/328 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80 + +VSWN+N +S + + +K L + D++ +QE+ A+ Sbjct: 5 ITIVSWNMNGISFLKSEPQKRGLLK--ARITRQLNDFIHVHRPDLIAIQEIVRYKENGAI 62 Query: 81 AKVFPKNTWCIF----------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 ++ + + R D+ + R Sbjct: 63 QELVEPPDGYFYQSSISIDTARQNNPVKWEPIRQSGKWTSDAYLGQGNGLMWRGDIPHCS 122 Query: 125 QQSYP-----------------LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 + G R AV + I++ ++HL + Sbjct: 123 IWDWKGEKAQRGERLRQEVIRIDTGLFIGTRDTEPRIAVVSHFIWGARHIFMANLHLTTL 182 Query: 168 CFLDSLENTYS-PSCSLLSQQAQWLKDWI----TQKKESLVPF--------VIAGDFNRK 214 + QQ + + I E P +AGDFN Sbjct: 183 SREREGFPERDCLGAEIRGQQLDIVLNGIVSRYNHWCEKDNPIPSDDRPVWFLAGDFNAT 242 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 N L I + L P + K + + +DY Y F ++ Sbjct: 243 ENSLEI-----AKIRRLNFLDLCPDKGTGTKRGKKGQKAALTLDYIFAGPAYYAF-DPQT 296 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++L +SDH PI + Sbjct: 297 VKQVLEETGRPPLYEVTVSDHYPIIAKF 324 >gi|148245026|ref|YP_001219720.1| exodeoxyribonuclease III [Candidatus Vesicomyosocius okutanii HA] gi|146326853|dbj|BAF61996.1| exodeoxyribonuclease III [Candidatus Vesicomyosocius okutanii HA] Length = 256 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 89/304 (29%), Gaps = 76/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +R+++ N+N + ++ + KN +AD+V LQE+ + + + Sbjct: 2 IRIITTNVNGIRA---------------AERKGFLNWIKNQNADVVCLQEIKATEEQLDE 46 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 F + +Y + +S + + + + + F Sbjct: 47 RFYPEEYHCYYQPAQKKGYSGTTIFTKQ-------TPIQVIKESPWKDINFEGRF----- 94 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +++N K V+ I++ S + +N + ++ + K S Sbjct: 95 -------IQVNFKNFSVISIYIHSGSAKQARQNLKMEFLTERFM------PYLQELKISG 141 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTID----PNDSLIRFPKEKDSRC-----------NA 247 +I GD N + + P + Sbjct: 142 RKVIICGDMNIVHQERDIKNWKANQKNSGCLPEERAWLDKLFFKVGFIDGFREVNQEDQQ 201 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 N+ IDY ++ N + + + KR SDH PI Sbjct: 202 YTWWSNRGQAWANNIGWRIDYQILTPNLKGKVKNANI-----------YKNKRFSDHAPI 250 Query: 299 SIDY 302 +DY Sbjct: 251 IMDY 254 >gi|19553788|ref|NP_601790.1| extracellular nuclease [Corynebacterium glutamicum ATCC 13032] gi|62391431|ref|YP_226833.1| extracellular nuclease [Corynebacterium glutamicum ATCC 13032] gi|21325364|dbj|BAB99985.1| Predicted extracellular nuclease [Corynebacterium glutamicum ATCC 13032] gi|41326772|emb|CAF21254.1| Predicted extracellular nuclease [Corynebacterium glutamicum ATCC 13032] Length = 916 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 101/349 (28%), Gaps = 71/349 (20%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT----------------------T 51 + VA + + S+N+ G S R Sbjct: 479 LASINDVAGEFHIASFNVLNYFTSLGEDEPGCSAYRDINNTPVTANNCNVRGAYTEEALE 538 Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYN------------------AVAKVFPKNTWCIFY 93 + + + LD D++ L+E+ + A+ + + W Sbjct: 539 DQQSKIVEAINRLDVDVLGLEEIENTATVTGDVSRRDDALNTLVAALNEAVGSDRWAAVE 598 Query: 94 STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153 S E+L I A + V+ + +S A + + + + Sbjct: 599 SPEQLGTDEDY-----IRVAFIYDQTTVKPVGESRIFDDAAFTGTARQPLAQEFQPLNDS 653 Query: 154 GKKIWVLDIHLKSFCFLDSLENT----YSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIA 208 K + H KS + + + ++ QAQ L D + + + + P I Sbjct: 654 EKSFVGVVNHFKSKGSVTRGDADTGDGQGNNANVRVAQAQALIDHLENQDDWASKPIFIL 713 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 GD N T+ + + + +D+ + ++ A K Sbjct: 714 GDTNSYAKET-----AMTTLYGAGYTNIATEFDAG--YSYQFSGRIGSLDHALGNEAAMK 766 Query: 269 FLIQESFSEILYNEDDIKSRGKRL--------------SDHCPISIDYD 303 +I +I +E +RL SDH PI + ++ Sbjct: 767 HVIDAEVWDINADEAIAFEYSRRLNNTSDVFENNVFRSSDHDPIKVGFN 815 >gi|295112781|emb|CBL31418.1| Metal-dependent hydrolase [Enterococcus sp. 7L76] gi|315145547|gb|EFT89563.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX2141] gi|315162610|gb|EFU06627.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0645] Length = 254 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 83/287 (28%), Gaps = 48/287 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+ V + + + + Q D + +QE+ Sbjct: 1 MKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138 Y+T ++ + AI ++ V+ + Y L Sbjct: 54 A--------YTTFTCLSAEREGDGQGEGLAILYNEQKVQTIDTGYFWLSETPQQPSIHPE 105 Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R + L + V+++HL + + ++ + L D I Sbjct: 106 AGCPRITLWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNANKNLRNK 254 Q P ++ GDFN + + + K N + P+ K Sbjct: 158 QY-----PTLLMGDFNAE-SGEEVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAEL 211 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + + + G+ SDH P+ + Sbjct: 212 EEIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248 >gi|225012120|ref|ZP_03702557.1| exodeoxyribonuclease III Xth [Flavobacteria bacterium MS024-2A] gi|225003675|gb|EEG41648.1| exodeoxyribonuclease III Xth [Flavobacteria bacterium MS024-2A] Length = 257 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 33/306 (10%), Positives = 88/306 (28%), Gaps = 74/306 (24%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + ++++S+N+N + + + AD++ +QE+ A+ Sbjct: 3 KDLKILSYNVNGIRAALNKGF---------------ASWLDSTAADVICIQEI---KALE 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + ++ +A+ K + D R Sbjct: 45 EQVDTAALEALGYHHFWFSAQ-----KKGYSGVAIFSKIKPTNVTFGCGIEHMDFEGRI- 98 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + K+ ++ ++L S +D + +++I K+ Sbjct: 99 --------IRADFDKVSIMSLYLPSGTNID--------RLEYKFKFMAEFQEYIDLLKKE 142 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNA 247 +I GD+N + + +D I + + + Sbjct: 143 FPNLIICGDYNICHHAIDIHDPVRNKNVSGFLPEERKWLDGFITSGFIDSFRYLNPEPHH 202 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY ++ ++ + + + SDHCP+ Sbjct: 203 YSWWSYRANARNNNKGWRIDYALVSESLKDNINRA-----------YILPEAKHSDHCPV 251 Query: 299 SIDYDF 304 ++ +F Sbjct: 252 GVELNF 257 >gi|302866198|ref|YP_003834835.1| endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca ATCC 27029] gi|302569057|gb|ADL45259.1| Endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca ATCC 27029] Length = 265 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 30/296 (10%), Positives = 63/296 (21%), Gaps = 52/296 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++WNI T + + D++ LQE + Sbjct: 2 LRVMTWNIRTGGRDGDGT----------DRRDRIVSVVTAQRPDVLALQE---------L 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + S A+ VR + R + Sbjct: 43 RGMDATLGGLAGRLGMTPYLARSCFGQPVAVLVRPPLRVLRAGRVR---------RPFHH 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ--QAQWLKDWITQKKES 201 A + V + V HL + + +L + L + + + Sbjct: 94 AAARVQVATGAGPLTVFSTHLNPYSGGRRRMEADWLAAALRRTGGELALLAGDMNTLEPT 153 Query: 202 LVPFVIAGDFNRKINYLGNN--------DDFWKTIDPNDSLIRFPKEKDS------RCNA 247 + +D + D Sbjct: 154 ADHTARLAGLATPYRRRHLRRDGRTVDTRAVARLLDAGLVDLWPWSGGDEPGGLTVPTRH 213 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +DY + + SDH P+ + D Sbjct: 214 GGAEFAGMRLDYLLATPALADR--------VRAVRVVRDGDADSASDHYPVLAEVD 261 >gi|45658178|ref|YP_002264.1| hypothetical protein LIC12332 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45601420|gb|AAS70901.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 360 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 92/321 (28%), Gaps = 66/321 (20%) Query: 23 KVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 K++++ WN+ L+ S + + Y + D D++ Q Sbjct: 51 KIKVLVWNVQYLAGKKRIFWYDLPNGDGPDTGPSKEEIEETLKKVAGYIHSEDPDVILFQ 110 Query: 73 EMGS-------YNAVAKVFPKNTWCI------FYSTERLINHSKRDSNNDIHTAIAVRKK 119 E+ + + ++ + FY + H K + + A + K Sbjct: 111 ELHDGAENTFREDQLERILSRIGSEYVCRSEAFYWKSNFVPHPKILGSVGMKLATISKYK 170 Query: 120 NVRVLQQSYPLLGAKDSFSRAGN-RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTY 177 ++ S PL+ A ++ R ++ + I G K VL+ HL +F + Sbjct: 171 ISDGIRHSLPLMPADPISTQFNLKRAILQNDLPIEGGDKFTVLNTHLDAFSQGTDTMHR- 229 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI----------------NYLGNN 221 Q + + + + + +V+ GDFN + Sbjct: 230 ---------QVETITGLLKELDLAGHYWVLGGDFNLLPPGFDRKSMHPNGAFFYSDEQEI 280 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFS 276 + + + + IDY N + + Sbjct: 281 KPLFDRWNSAVPFKILNGPEKEKYYTYYPNDPAIGKPDRTIDYIFYSSNLKQ----SGYK 336 Query: 277 EILYNEDDIKSRGKRLSDHCP 297 D K +SDH P Sbjct: 337 V------DQKDILWTISDHFP 351 >gi|220932969|ref|YP_002509877.1| Endonuclease/exonuclease/phosphatase [Halothermothrix orenii H 168] gi|219994279|gb|ACL70882.1| Endonuclease/exonuclease/phosphatase [Halothermothrix orenii H 168] Length = 281 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 42/279 (15%), Positives = 80/279 (28%), Gaps = 64/279 (22%) Query: 26 LVS-WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +++ +NI+ +G D + + K D+DI+ L E+ F Sbjct: 51 VITLYNIHHGVGIDG-----------RLDLDRIARVLKKTDSDIIGLNEV-DRGLKRSGF 98 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + + + + AV K + PL R Sbjct: 99 QHQVQILARKLKMNYAYGPNLQTGEGSYGNAVLSKYPISEVINKPLP----VIDSTEKRG 154 Query: 145 AVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ +V + G + ++ HL S QQ +W+ ++ + Sbjct: 155 LLQAIVSLPGGPELKIMVTHL-------------STDFKEREQQLKWINEYTNNIE---T 198 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 PF++ GDFN++I I+ + + ID Sbjct: 199 PFILMGDFNQRIP----------AINLEGLYPLAT-----NVKTYPSTAPEELIDLVF-- 241 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +F Y D SDH P+ + Sbjct: 242 -------SNYNFRVEEYTIDT------MASDHLPVIVKL 267 >gi|294669077|ref|ZP_06734163.1| exodeoxyribonuclease III [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309069|gb|EFE50312.1| exodeoxyribonuclease III [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 300 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S N+N + + +Y ADI+ +QE+ + A Sbjct: 44 LKIISANVNGIRSAYKKGFY---------------EYIAASGADIICVQELKAQEA---- 84 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H ++ +AV K +G R Sbjct: 85 ---DLSDEMKNPHGMHGHWHCA-EKRGYSGVAVYSKRAP----DNVQIGMGIEEFDREGR 136 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + K+ V+ ++L S + L + + K Sbjct: 137 F-----VRCDFGKLSVISLYLPSGTSAPERQ-------ELKYRFLDAFYPMLEAMKAEGR 184 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248 V+ GD+N + + + + Sbjct: 185 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHTLGWTDMWRTLYPDNPGY 244 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY ++ + + ++ SDH P+ Sbjct: 245 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 293 Query: 300 IDYDF 304 ++YD+ Sbjct: 294 VEYDY 298 >gi|157736673|ref|YP_001489356.1| hypothetical protein Abu_0412 [Arcobacter butzleri RM4018] gi|157698527|gb|ABV66687.1| conserved hypothetical protein [Arcobacter butzleri RM4018] Length = 313 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 101/324 (31%), Gaps = 56/324 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR---QYAKNLDADIVFLQEMGSYNA 79 K+R+ ++N+ K + ++ DIV QE+ S + Sbjct: 2 KLRVGTFNLFQFCSPPFSFYTKKEKFTPEEWNEKIAWCKNQLNLMNCDIVGFQEVFSNDE 61 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + + + ++ K++ I T +A+ K + + D+ S Sbjct: 62 LKNLCLEVGFK-YFEVVDFAKVDKKNEKVYISTTVAIASKFPIINIEKI------DTKSF 114 Query: 140 AGNRRAVELLVEING-KKIWVLDIHLKSFCFLD--------------------SLENTYS 178 R ++ ++ + K I V HLKS + +L++ YS Sbjct: 115 KFARIPIKAIISLPNEKNITVYITHLKSNRENEFEYIFTKNDTLEDKLKKVEVALKDNYS 174 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR-----KINYLGNNDDFWKTIDPNDS 233 S +A+ L I + P ++ D N I+ L N + K + +D Sbjct: 175 LSLKQRINEAKILFYDIK---SNKTPTILMCDLNDKEFSITIDALTNKRFYNKNLKKDDY 231 Query: 234 LIRFPKEKDSR--------------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 L+ + +DY + + K S+ Sbjct: 232 LLFDAYYLHKPKIYNPHPEFKGIKRTPTSYFAGKGNILDYIFVSKELQK---ISSYEVFD 288 Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303 + + + SDH + + + Sbjct: 289 KHLQKNHNGSLKQSDHAQVVCEIE 312 >gi|149914379|ref|ZP_01902910.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. AzwK-3b] gi|149811898|gb|EDM71731.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. AzwK-3b] Length = 343 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 42/342 (12%), Positives = 88/342 (25%), Gaps = 62/342 (18%) Query: 24 VRLVSWNINTLSEQEGVSL----WKNSVKRT----TSDYTLLRQYAKNLDADIVFLQEMG 75 +R+ ++N+ + +R L LDAD V + E Sbjct: 1 MRIATYNVEWFDALFDDEGALLADDDWSRRHGVTRADQLASLGIVFTALDADAVMVIEAP 60 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 V ++ F + ++ A+ + K Sbjct: 61 DDTDRRSTVAALESFADFAQIRARRAVTGFANDTQQEIALLYDPDVLSCAHDPKGEPTGK 120 Query: 135 DSFSRAGN-RRAVELLVEINGKK---------------------IWVLDIHLKSFCFLDS 172 S A + ++I+ + ++ HLKS + Sbjct: 121 KGSSDAPRFDGVFRIDLDIDDTEDLVAFSKPPLELACTTATGVAFRMIGAHLKSKAPHKA 180 Query: 173 LENTYS-----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN------ 221 + QA WL+ I + ++ GD N Sbjct: 181 RSRDQIMRMAIANRRKQQAQAVWLRHRIEEHLAQGETLIVLGDLNDGPGLDEYEHLFGRS 240 Query: 222 ----------DDFWKTIDPNDSLIRFPK-----EKDSRCNANKNLRNKIPIDYFVMDQNA 266 D + DP+ + + + +DY ++ + Sbjct: 241 SVEIVMGEGGDAAAQLFDPHARRALTRRIGAMIATARFYLPTEKRYLQALLDYIMVSSDL 300 Query: 267 YK----FLIQESFSEI-LYNEDDIKSRGKRLSDHCPISIDYD 303 + I F + + +++ SDH P+++D D Sbjct: 301 EARQPRWRIWHPFDDPGCFRIPELREALLAASDHFPVTMDVD 342 >gi|256845169|ref|ZP_05550627.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2] gi|256718728|gb|EEU32283.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2] Length = 279 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 97/307 (31%), Gaps = 38/307 (12%) Query: 1 MIR-KYVLALVFFLVPCTA--SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 M + K +L+++F L + S+A + + S+NI L D Sbjct: 1 MKKGKLLLSIIFALFFSLSVLSLADEAYIASFNILRLGV-------------AKKDIPQT 47 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAV 116 + + DIV L E+ + + V ++ + + I+ S+ + A Sbjct: 48 VKILQGF--DIVGLVEVINRDGVEELVDELNKQSDEKWDYHISPFGVGSSKYKEYFAYVY 105 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 +K V+ ++ K S R +I + +H Sbjct: 106 KKDKVKFIKSEGFYKNGKSSL----LREPYGATFQIGNFDFTFVLVHTIYG--------N 153 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + + + D+ K + IAGDFN + +K D I Sbjct: 154 NEAQRKAENFKMVDVYDYFQDKDKKENDIFIAGDFNL-YALDESFRPLYKHADKITYAID 212 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + N D F Q + S + ++ D+ K + +SDH Sbjct: 213 PAIKTTIGTKGRANSY-----DNFFFSQKYTQEFTGSS-GALDFSGDNPKLMREIISDHI 266 Query: 297 PISIDYD 303 P+ I + Sbjct: 267 PVFIVVE 273 >gi|253686638|ref|YP_003015828.1| Endonuclease/exonuclease/phosphatase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753216|gb|ACT11292.1| Endonuclease/exonuclease/phosphatase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 381 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 34/275 (12%), Positives = 85/275 (30%), Gaps = 27/275 (9%) Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 ++ + L+ADI+ E+ + + + + +S +I+ Sbjct: 111 SSQQRKNTGKIITLLNADILCAVEVENMDVLRDFNNQVLGDDKFSQFVMIDSPN--DPRG 168 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 I A R + ++ + A F +R +E+ ++ K+ + + Sbjct: 169 IDVACLTRYRIAQL---RTHIFDAGKRFDPVFSRDCLEVTLDAGLKQ-PIYILCNHFKSQ 224 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLGNNDDFWKTI 228 E QA+ + + + Q + VI GD N + ++ ++ Sbjct: 225 SGQTEEERLRGAEKRRDQAERVAEIVQQTYDLKKDYVVILGDLNEDSSNPWHSLAPLFSL 284 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIP----IDYFVMDQNAYKFLIQESFSEI------ 278 +I + + R K +DY + ++ +++ Sbjct: 285 SDLHPVIDPERPEKERYTYYFAGGKKGARLNQLDYIFLSAPLHQAVVEWGVERRGIYNID 344 Query: 279 ----------LYNEDDIKSRGKRLSDHCPISIDYD 303 + ++ S SDH + ++ D Sbjct: 345 KIAAKEGAEPVTPLPEVTSWDTAASDHAALWVEVD 379 >gi|224133800|ref|XP_002321664.1| predicted protein [Populus trichocarpa] gi|222868660|gb|EEF05791.1| predicted protein [Populus trichocarpa] Length = 366 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 102/340 (30%), Gaps = 87/340 (25%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + ++ ++WN N+L + R +++ ++ ++D D++ +QE+ A + Sbjct: 47 EPLKFITWNANSL------------LLRVKNNWPGFSKFVSDIDPDVIVIQEVRMPAAGS 94 Query: 82 KVFPKNTWCI----------------FYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVL 124 K PKN+ I S+ N++ S + + A+ K Sbjct: 95 KGAPKNSGEIKDDTNSSREEKKILMRALSSSPFGNYNVWWSLADSKYAGTALLVKKCFQP 154 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + L S R + K +L+ + + + S Sbjct: 155 VKVSFALDQTASKHEPDGRVILA-----EFKTFRLLNTYAPN-----NGWKEEEKSFQRR 204 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG------------------------- 219 + + + + + Q + P + GD N + Sbjct: 205 RKWDKRMLEVVVQLSDK--PLIWCGDLNVSHEEIDVSHPEFFSAAKVNGYVPPNKEDCGQ 262 Query: 220 ------NNDDFWKTIDPNDSLIRFP----------KEKDSRCNANKNLRNKIPIDYFVMD 263 F + + + S K ++ ID+F++ Sbjct: 263 PGFTLSERKRFGAILKEGKLIDAYRFLHKERDMERGFSWSGNPIGKYRGKRMRIDFFIVS 322 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +IQ I+ G SDHCP+S++ Sbjct: 323 EKLKDRIIQCEMH-----GHGIELEGFYGSDHCPVSLELS 357 >gi|56416778|ref|YP_153852.1| exodeoxyribonuclease III [Anaplasma marginale str. St. Maries] gi|56388010|gb|AAV86597.1| exodeoxyribonuclease III [Anaplasma marginale str. St. Maries] Length = 276 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 81/313 (25%), Gaps = 76/313 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++WN+N L DI LQE + Sbjct: 2 IRILTWNVN----------------SVRKRVAHLCSVLTEHHVDIALLQETKCTDD---- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV---------LQQSYPLLGAK 134 + + + +A+ K V ++ + Sbjct: 42 ------QFPLAELEDLGYKCYIHGQKSRNGVAILSKYPIVGELCNTVFDAEEEIGTVQDT 95 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 S+S R +E LV+ K+ V +++ + +D+ Y + + Sbjct: 96 GSYSVTEARY-LECLVDYQDVKVRVASVYVPNGQEVDTETFVYKLNFLRCLKARLLKLLA 154 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP----------------NDSLIRFP 238 VI GD+N + + D + +D + Sbjct: 155 REDW------LVIGGDYNVAPDDIDVYDA--QALDGKLCFHPKERAGLREILHLGFTDAF 206 Query: 239 KEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + ID+ ++ NA L++ S Sbjct: 207 RILHEGKQEFSWWNYREGSWQRNRGMRIDHLLLSPNAVDKLVECSI-------LSSVRGL 259 Query: 290 KRLSDHCPISIDY 302 + SDH P+ Sbjct: 260 ESPSDHAPVMCVL 272 >gi|294055155|ref|YP_003548813.1| exodeoxyribonuclease III Xth [Coraliomargarita akajimensis DSM 45221] gi|293614488|gb|ADE54643.1| exodeoxyribonuclease III Xth [Coraliomargarita akajimensis DSM 45221] Length = 262 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 71/301 (23%), Gaps = 70/301 (23%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L+SWN+N L + + D++ LQE + F Sbjct: 6 LLSWNVNGLRAVLKKGFD---------------DFLASQQPDVLCLQETKISADLTADFA 50 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + Y ++ A+ + + + + D R Sbjct: 51 FAGYPYVYWNCAEK---------KGYSGTAIISQIEPISVRYGLGIEKHDQEGR------ 95 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++ + +++ ++ + D + L +L + E P Sbjct: 96 ---VITAEFEDYYLVTVYTPNSQNHDENKRPRRLDYRTLEWDVDFLA--YVKGLEVTKPV 150 Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 V GD N + I + F R Sbjct: 151 VFCGDLNVAHTEIDLANPKTNRKNAGFTDEERGRFDAIIEAGFIDTFRHLYPDRTEQYSW 210 Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + IDYF + + + SDHCP+ + Sbjct: 211 WSYRAAARQRNIGWRIDYFCVSDAVKNQIRDATILADTL-----------GSDHCPVGLR 259 Query: 302 Y 302 Sbjct: 260 L 260 >gi|254439233|ref|ZP_05052727.1| exodeoxyribonuclease III (xth) subfamily [Octadecabacter antarcticus 307] gi|198254679|gb|EDY78993.1| exodeoxyribonuclease III (xth) subfamily [Octadecabacter antarcticus 307] Length = 262 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 31/306 (10%), Positives = 73/306 (23%), Gaps = 71/306 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L +WNIN++ +EG+ + + D++ LQE S + Sbjct: 2 SFTLATWNINSVRLREGL----------------VARLMTEEAPDVLCLQECKSPVDLIP 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + L H + +A+ K + + + Sbjct: 46 L---------EQFQALGYHHMVARGQKGYNGVAIFSKMAIEEVAAEDFVSLGHARH---- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + +E + V + ++ + D + ++D+ Sbjct: 93 ---IAGKLENG---VTVHNFYVPAG--GDKPNREINEKFGQKLDYLTEMRDYFRANAPEK 144 Query: 203 VPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N D + + + N Sbjct: 145 S--ILVGDLNIAPREDDVWDHKKLLKVVSHTTVEVEHLADVQGAGDWVDVTRADIPDGNL 202 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + ++ SDH P Sbjct: 203 YSWWSYRAPDWDTADKGRRLDHIWATPDIANSAHSS-------RVIRAVRGWEQPSDHAP 255 Query: 298 ISIDYD 303 + +D Sbjct: 256 VFAMFD 261 >gi|163782364|ref|ZP_02177362.1| exodeoxyribonuclease III [Hydrogenivirga sp. 128-5-R1-1] gi|159882397|gb|EDP75903.1| exodeoxyribonuclease III [Hydrogenivirga sp. 128-5-R1-1] Length = 258 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 33/301 (10%), Positives = 75/301 (24%), Gaps = 73/301 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N + LL + + D++ LQE+ Sbjct: 1 MKIATYNVN----------------SIKARKELLFSWLEREPVDVLCLQELKQEE----- 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y + + + + K + G D + R Sbjct: 40 -----KNFPYGEFEERGYRCEVFAQKTYNGVCICSKLPMEDVRK----GFGDEYFDQQKR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ +I V++++ + + Y L +++ Sbjct: 91 -----VISAKVGEIRVINVYAPHGDLRGTEKFYYKLEFYDR------LLRYLSDNFSPEE 139 Query: 204 PFVIAGDFNRK----------------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P + GDFN + F + + I + Sbjct: 140 PICMVGDFNVAREDIDVFDPELLKDTIGTMKEEREAFERVLK--WGFIDAFRYLYPDRVQ 197 Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY ++ + L + R + SDH P+ Sbjct: 198 FTWWDYIGGMIWKDKGMRIDYILITEPLLGKLKEVYVDLWPRK-----RRTPKPSDHAPV 252 Query: 299 S 299 Sbjct: 253 I 253 >gi|330817173|ref|YP_004360878.1| Endonuclease/exonuclease/phosphatase [Burkholderia gladioli BSR3] gi|327369566|gb|AEA60922.1| Endonuclease/exonuclease/phosphatase [Burkholderia gladioli BSR3] Length = 289 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 88/305 (28%), Gaps = 54/305 (17%) Query: 29 WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-------------G 75 WN+ + G + + RT ++ L + D++ LQE+ Sbjct: 6 WNVQWGRDASG----RVDLGRTVAEARALADF------DVLCLQELTRGFDSLPGGPGAD 55 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYPLLGAK 134 + +A + P T + + ++ + + A+ + + L Sbjct: 56 QFAELAALLPGYTVIEALAVDLPLDPGQAAAGAPRRQFGNAIATRLPVGRILRHTLPWPA 115 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D + R A+E ++ + V+ HL+ + + + ++A Sbjct: 116 DDSVPSMPRVALEANLQTAHGPLRVVTTHLEFYSGAQRM--AQVEALREQHREAIDHARH 173 Query: 195 ITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 +++ F V+ GDFN + + + Sbjct: 174 PASAEKTGSAFTASARARDAVVCGDFNSAWRDDAYRRLLAPIDGAPAFVDAWMHAHPGKT 233 Query: 246 NANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + D+ + + + +++ R SDH P Sbjct: 234 PPPTAGVHDTEQWRQGSLTCDFVFVTETLRERILRCEIDSTT-----------RASDHQP 282 Query: 298 ISIDY 302 I ++ Sbjct: 283 ILLEL 287 >gi|320104698|ref|YP_004180289.1| endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC 43644] gi|319751980|gb|ADV63740.1| Endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC 43644] Length = 375 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 40/336 (11%), Positives = 82/336 (24%), Gaps = 57/336 (16%) Query: 1 MIRKYVLALVFFL--------VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-- 50 MI +L ++ P + + WN+ L + + ++ Sbjct: 43 MIALVLLIVLVTTPRQDGVGRSPVIQPGGEGYLVCFWNVENLCDDTNDFKNTDPIEDWFA 102 Query: 51 ------TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN 100 LL + ++ D++ L E+ + AV ++ + Sbjct: 103 TNPRALAHKLDLLAETLLAMNGGRGPDLLALVEVENRRAV-ELLRDRLHRELPPELHYRH 161 Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 D A+ + G RR ++ +VE++G ++ VL Sbjct: 162 LVHHDLTTGRRVEPAILSRLPI----------NPARTRTFGQRRILQAVVEVDGDELAVL 211 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL-- 218 H S + + L+ ++ GDFN Sbjct: 212 VAHWTSRLTDQEGT-KRLEYGLACLEAVEALRRL-----NPAADVLVMGDFNDHPQDRSL 265 Query: 219 -------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 + + +D+ V+ Sbjct: 266 TEGLRAGPSPSAIDADGTLFRLWNLMTLIEPGTAGTYWYRGGWEILDHLVVSPGLVDQRG 325 Query: 272 QESFSEILYNEDDIKSRGKR-----------LSDHC 296 + + L D+ R R SDH Sbjct: 326 WQVLPKTLTLGDNSDRRPLRFGGPNHQEPRGPSDHL 361 >gi|239983300|ref|ZP_04705824.1| exonuclease [Streptomyces albus J1074] gi|291455127|ref|ZP_06594517.1| exonuclease [Streptomyces albus J1074] gi|291358076|gb|EFE84978.1| exonuclease [Streptomyces albus J1074] Length = 259 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 74/304 (24%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N T+ L + ++ D++ +QE + Sbjct: 1 MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCIQETKTTEEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ + + L G + R Sbjct: 42 -------FPADALAELGYESAVRATGRWNGVAIVSRAG-LDDVVGGLPGGPEYDGVEEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + + Y Q + L+D + Sbjct: 94 A-----ISATCGPVRVWSVYVPNGREVGHPHFAYK------LQWLKALRDAVADDAAGGR 142 Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 PF + GD+N + + + P+ Sbjct: 143 PFAVLGDYNIAPHDTDVWDPTAFIGATHVTPEEREALAALRATGLDDVVPRPLKYD-QPF 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID + D + +GK SDH P+ Sbjct: 202 TYWDYRQLGFPKNRGMRIDLVYGNDPFRAA-------VSDAYVDREERKGKGASDHAPVV 254 Query: 300 IDYD 303 D Sbjct: 255 TDLT 258 >gi|27881735|gb|AAH43839.1| LOC398451 protein [Xenopus laevis] Length = 303 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 84/304 (27%), Gaps = 37/304 (12%) Query: 9 LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DA 66 L+F C A +R+ S+N+ + E T D + + + Sbjct: 12 LLFLCAICV-PDALGLRICSFNVQSFGE-------------TKRDKPAVMNVVRMIISRC 57 Query: 67 DIVFLQEMGSYNA-----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 DI L E+ + + + R S + + RK V Sbjct: 58 DITLLMEIKDSSDTVIRSLMTQLNSQPETRNQFDLTISQRLGRKSYKEQY-GFIYRKNLV 116 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 V +++Y + + A +R + + + I + + E Sbjct: 117 SV-KETYQYMDLQPGDEDAFSREPYVVWFQAPSTDVKEFVIIPQH----TTPEAAVREID 171 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 L + W F+ GD N +Y+ + + + + Sbjct: 172 ELYDVYLDVKEKW------DSENFIFMGDLNAGCSYVPKKSWKNIRLRNHTEFVWLIGDN 225 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPIS 299 + I V+ ++ S S + + + L SDH P+ Sbjct: 226 KDTTVKSSTNCAYDRI--VVVGDKLISSIVPTSASVFDFMAAYGLTEEQALEVSDHFPVE 283 Query: 300 IDYD 303 + Sbjct: 284 VQLT 287 >gi|299139581|ref|ZP_07032755.1| Endonuclease/exonuclease/phosphatase [Acidobacterium sp. MP5ACTX8] gi|298598509|gb|EFI54673.1| Endonuclease/exonuclease/phosphatase [Acidobacterium sp. MP5ACTX8] Length = 1327 Score = 81.9 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 38/337 (11%), Positives = 89/337 (26%), Gaps = 56/337 (16%) Query: 14 VPCTASVAQKVRLVSWNINTL---------------SEQEGVSLWKNSVKRTTSDYTLLR 58 + + ++ + S+NI + + L Sbjct: 594 LLAAPTPGKQFTVASFNIERFYNTSSTDNLYFVPSSGTTATSEAATLTPAAYSRRLQKLS 653 Query: 59 QYAKNL--DADIVFLQEMGSYNAVAKVFPKNT-----WCIFYSTERLINHSKRDSNNDIH 111 +N+ DIV ++E+ + + + + ++ I Sbjct: 654 LAIRNVLNTPDIVTIEEVENQSVATDIANQINSDAGVPNLYTGYSTDNTTYFTQDGTGIS 713 Query: 112 TAIAVRKKNVRVLQQS--------YPLLGAKDSFSRAGNRRAVELLVE---INGKKIWVL 160 V+ V L + P + ++ + + V+ Sbjct: 714 VGFLVKNSTVDQLSVTQFGQGETFTPTTSNSPITLNDRPWMVLSAGIKRAGASDYPVTVI 773 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 H+K+ +DS +T + L QA+ + +I + + + GDFN G Sbjct: 774 VNHMKALTGVDSTTSTSTRQKKEL--QAEDIAKYIQTLQAAGKHVISGGDFNAFEFSDGY 831 Query: 221 NDDFW------------------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 D + + S + + +D+ V+ Sbjct: 832 TDTLATYTNVNILPSDQVVQPGTAGLVTPSLVDLALNMAPSDRWSYVEDGDAQILDHMVV 891 Query: 263 DQNAY---KFLIQESFSEILYNEDDIKSRGKRLSDHC 296 +F+ ++ + + R SDH Sbjct: 892 TPELAAGTQFVYAHLDADFPLTAYNDATTPARTSDHD 928 >gi|281421496|ref|ZP_06252495.1| AP endonuclease domain protein [Prevotella copri DSM 18205] gi|281404568|gb|EFB35248.1| AP endonuclease domain protein [Prevotella copri DSM 18205] Length = 365 Score = 81.9 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 88/303 (29%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+N Q + N Y + DADIV LQE + Sbjct: 101 IKVLSYNTWNFGAQTEDAEGTNIC----------IAYLQEQDADIVCLQEACPTS----- 145 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 +N I + + + + + + + K + ++ P + Sbjct: 146 --RNIEQIDSMLKPMYAYQDTTMHVNGGNCLMLLSKYPILSKERIPYESKGNMS------ 197 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS------------------------P 179 V +++ +++ +++ HL++ + Sbjct: 198 --VAYRLKVKDREVLLINNHLETTGLSLEDRRQFKNLVIGKLQVDTAEETSKLLVVKLAE 255 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + + +A+ + +I Q ++ GDFN + D + Sbjct: 256 ATKKRAPEAEAVAKYIQQH--KEQSIILCGDFNDGPISYAHRTI------AKDLTDCYIA 307 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + + + ID + + + DD + +SDH PI Sbjct: 308 SGNGPGISYHHGGFFVRIDNIMCSDD---------WEPYECKVDDKIA----VSDHYPII 354 Query: 300 IDY 302 Sbjct: 355 CKL 357 >gi|238502697|ref|XP_002382582.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus flavus NRRL3357] gi|220691392|gb|EED47740.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus flavus NRRL3357] Length = 438 Score = 81.9 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 87/313 (27%), Gaps = 35/313 (11%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +R V A+ Q ++S+N+ L + + + Sbjct: 1 MRSIAYLASGLPVALAATSGQ-FDVLSFNVAGLPAILNGNEVPGDKTNNSK---AIGAKF 56 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 D D++ +QE +Y+A + + + V Sbjct: 57 AEYDYDVIHVQEDFNYHA---------YIYETDDHPYRTATSGGAGIGSGLNTLANYPWV 107 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPS 180 + + + + V + G + ++H + D + + Sbjct: 108 DFERVKWETCSDASGSDCLTPKGFTTMRVRFDEGVYVDFYNLHTDAGSETDDVTARSAN- 166 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIR 236 Q + D+I + ++ GD N + G N + +P LI Sbjct: 167 -------LQQVADYI-GNNSAGNAVLVFGDTNARYTSSGENIRVFGTEQNMTNPWVELIL 218 Query: 237 FPKEKDSRCNAN-----KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 E + +D + I+ S + Y + G Sbjct: 219 NGVEPTEGTDPWMCDNPTTNNTCETVDKIFYRGS---RSIELSATFWSYVGTKFELDGHI 275 Query: 292 LSDHCPISIDYDF 304 LSDH P++ ++ + Sbjct: 276 LSDHNPVTSNFTW 288 >gi|28211273|ref|NP_782217.1| exodeoxyribonuclease III [Clostridium tetani E88] gi|28203713|gb|AAO36154.1| exodeoxyribonuclease III [Clostridium tetani E88] Length = 260 Score = 81.9 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 38/308 (12%), Positives = 80/308 (25%), Gaps = 81/308 (26%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80 K+R+ SWN+N L + + ++ + D+ LQE + + Sbjct: 3 KMRIFSWNVNGLRAIAKKNFF---------------KWVEEEKPDVFCLQETKIQDHQLE 47 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + ++S +S + +S + F Sbjct: 48 DNLKNIEGYKSYFSFAEKKGYSGVATYTK-------------TEPKSVLNGIGIEEFDNE 94 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 G ++ ++ +L+I+ + D + + D+ Sbjct: 95 GR------VLISEFEEFTLLNIYFPNGQMNDERLDYKLRFY-------DAILDYCNDLVS 141 Query: 201 SLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSR 244 +I GD+N + + K I+ + + Sbjct: 142 KGKKLIICGDYNTAHREIDLKNPKNNEKYSGFLPIEREWIDKFINNG--YVDVYRNFYPE 199 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + IDYF + N + + SDH Sbjct: 200 KVEYSWWSYRFKARERNAGWRIDYFFVSDNVLPLIKDTKIHTEVL-----------GSDH 248 Query: 296 CPISIDYD 303 CPI + D Sbjct: 249 CPIELILD 256 >gi|116052214|ref|YP_788942.1| putative exonuclease III [Pseudomonas aeruginosa UCBPP-PA14] gi|115587435|gb|ABJ13450.1| putative exonuclease III [Pseudomonas aeruginosa UCBPP-PA14] Length = 266 Score = 81.9 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 82/304 (26%), Gaps = 70/304 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++ ++N+N + L + + DIV LQE+ + +A Sbjct: 2 DTLKIATFNVNG----------------IQTRLAALLAWLEREAPDIVCLQELKTPDA-- 43 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +A+ ++ + L+ L G Sbjct: 44 --------RFPAAALERAGYGAIWQGQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRY 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 AV + V ++L + + Y + + L + ES Sbjct: 96 LEAAV--------DGLLVASLYLPNGNPQPGPKFDYKLA------WFEHLIRHAAELMES 141 Query: 202 LVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCN 246 P V+AGDFN + D + ++ + + + R Sbjct: 142 GHPVVLAGDFNVVPSDFDIYDTRSWKKDALLQPESRECFERLLRQGWVDALRQRFPDRRI 201 Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ + L D + SDH P Sbjct: 202 YTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDAGV-------DRWVRGEEHASDHAPA 254 Query: 299 SIDY 302 + Sbjct: 255 WVSL 258 >gi|327294443|ref|XP_003231917.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Trichophyton rubrum CBS 118892] gi|326465862|gb|EGD91315.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Trichophyton rubrum CBS 118892] Length = 802 Score = 81.9 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 39/363 (10%), Positives = 96/363 (26%), Gaps = 84/363 (23%) Query: 22 QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 K ++++N + + + + LL + DADIV LQE+ + Sbjct: 417 DKFTVLTYNTLCDRYATHQQYGYAPSKALAWELRRDLLLSEIRGQDADIVCLQEVDQGSY 476 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL--- 131 + + + ++ S + K + + + Sbjct: 477 HGFFREQLAYNDYKGVYWPKGRAQGMSEEEAKVVDGCATFFKGSKYILLEKAMIHFGQTA 536 Query: 132 -------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 G D ++R + + ++V ++G++I V++ + + ++ Sbjct: 537 VRRPDAKGQDDIYNRLWQKDNIAVVVYLENRMSGERIIVVN---AHIYWDPAYKDVKLVQ 593 Query: 181 CSLLSQQAQWLKD---------------------------------------WITQKKES 201 +++ ++ L + + S Sbjct: 594 SAIMMEEVTQLAEKFIKIPPCTDKTAFRFSEPEDETINSENTSPPTPVEPSPSVEYSSPS 653 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC- 245 +P ++ GDFN + + D + + F + Sbjct: 654 QIPILVCGDFNSRPSSAVYNLLAHGRLEEEHPDLRDRLYGNLTRQGMTHPFTLKSAYSAI 713 Query: 246 ----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISI 300 N IDY N + + Y + SDH + Sbjct: 714 GELSFTNYTPGFTDVIDYIWYSSNLLQVTGLLGEVDKEYLQRVPGFPNYHFPSDHLALMA 773 Query: 301 DYD 303 ++ Sbjct: 774 EFS 776 >gi|226289942|gb|EEH45426.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Paracoccidioides brasiliensis Pb18] Length = 771 Score = 81.9 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 39/360 (10%), Positives = 85/360 (23%), Gaps = 75/360 (20%) Query: 20 VAQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 +K +S+N + + + LL K +ADIV LQE+ Sbjct: 382 QNEKFTALSYNTLCDRSATHQQHGYAPSRALAWEYRRDLLLNEIKGYNADIVCLQEIDQG 441 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL- 131 + + + + ++ + K + + + Sbjct: 442 SYHGFFREQLAYNDYKGVYWPKGRAQGMPEEEAKVVDGCATFFKGSKYILLEKNMIHFGQ 501 Query: 132 ---------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYS 178 G D ++R + + ++ ++G+++ V+++HL ++ + Sbjct: 502 TAVRRPDAKGQDDIYNRLWQKDNIAVVTYLENRLSGERLIVVNVHLYWDPAYKDVKLIQA 561 Query: 179 PSCSLLSQQAQWLKDWITQKKESLV---------------------------------PF 205 Q I + P Sbjct: 562 AILMEEVTQLAEKYAKIPACIDKTAFRFSEPENSTDGDGTATPAEPAPSVEYSSGSQIPL 621 Query: 206 VIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC----- 245 +I GDFN ++ + + F + Sbjct: 622 IICGDFNSYPGSAVYELMNRGHLIEDHPDLEKRLYGNLSRLGMSYPFNLKSAYGAIGELE 681 Query: 246 NANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 N IDY + + SDH I ++ F Sbjct: 682 FTNYTPDFADVIDYIWYTSNSLQVTGLLGEVDREYLQRVPGFPNYHFPSDHLAIMAEFSF 741 >gi|109082640|ref|XP_001090240.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase isoform 8 [Macaca mulatta] gi|90078218|dbj|BAE88789.1| unnamed protein product [Macaca fascicularis] Length = 318 Score = 81.9 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 76/311 (24%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +++ SWN++ L + K DI+ LQE Sbjct: 53 TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K+ + S + S+ + ++ + + ++ + G Sbjct: 98 KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRHCPLKVS----YGIG 147 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R V ++ ++ + + + L Sbjct: 148 EEEHDQEGRVIVA-----EFDSFVLVTTYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ + L Sbjct: 255 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 306 --GSDHCPITL 314 >gi|301309757|ref|ZP_07215696.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] gi|300831331|gb|EFK61962.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] Length = 628 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 86/310 (27%), Gaps = 66/310 (21%) Query: 1 MIRKYVLALVFF-LVPCTASVAQ--------KVRLVSWNINTLSEQEGVSLWKNSVKRTT 51 M + ++ A+V +P ++AQ +R++S+NI + V+ Sbjct: 10 MRKWFIWAIVLIGCLPINKALAQQSGDAERNTLRIMSYNIRNGRGMDEVT---------- 59 Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 D + + + + D+V +QE+ S + + ++ + Sbjct: 60 -DLGRIAEAIRKVAPDVVAVQEVDSVTGRSGGIDVLRTLGERTLM-FPTYAPAIDFDGGK 117 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 + + K V + L G R R + + E + HL Sbjct: 118 YGVGMLSKEKPVSYRYIALPG------REEERVLLWVEFE----RYIFCCTHLSLTP--- 164 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S +L ++A + P IAGD+N + I Sbjct: 165 ---EDRMLSLPILRREAA----------SAHKPLFIAGDWNATAHSP--------FITEI 203 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + +DY + + S Sbjct: 204 SKDFQLLSNPKQATFPASTPD--SCLDYIAGYVKNGQPFTRLSAWV---------PEEAV 252 Query: 292 LSDHCPISID 301 SDH P+ + Sbjct: 253 ASDHRPVVTE 262 >gi|219883168|ref|YP_002478330.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7425] gi|219867293|gb|ACL47631.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7425] Length = 352 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 41/353 (11%), Positives = 105/353 (29%), Gaps = 72/353 (20%) Query: 21 AQKVRLVSWNINTL-----SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 A+ R+ ++N+ L + + + + K + D+V LQE+ Sbjct: 2 AKSFRIATFNVENLLHPGVFFAGRPNDRPYQPELYKEKIDWIVRILKEGNVDLVGLQELF 61 Query: 76 SYNAVAKVFPKNTWCIFYSTERLIN------HSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 S A+ + + + Y+ + L + + K V ++S Sbjct: 62 SETALKDIAEQAGFPHSYAPDLLNGANIATREDGKQEARGPFVGLL--SKFPIVDRKSIV 119 Query: 130 LLGAKDSFSR----------------AGNRRAVELLVEINGK---KIWVLDIHLKSFCFL 170 + R ++ V++N ++V + K+ FL Sbjct: 120 DFPGETKGIEIEAGESTTEVKKLPIIRFLRPVIQANVQLNSDVIATVFVAHLKSKNPQFL 179 Query: 171 DSLENTYS----------PSCSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINY-- 217 DS + + S + + ++ L+ + + + P ++ GD N + Sbjct: 180 DSEDGRRNDPIVKAAGKTRSLIIRAAESVALRKMVVDATQNNNQPVLLFGDLNDDLPAVT 239 Query: 218 --------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 + W + + + + + + +D+ + Sbjct: 240 TEIIVGDEPYRFAKPEDKKIEWDRLLYSVHDLEEQESYRNVSYTHIFNGRYELLDHIFVS 299 Query: 264 QNAYKFLIQESFSEILYNE-DDIKSRGKRL----------SDH-CPISIDYDF 304 Q + + +D +R+ SDH P++ + ++ Sbjct: 300 QEFFHRNPESIAVVRSTRIFNDHLQDERRVVNPDRGLSSRSDHGIPVT-EIEW 351 >gi|149922823|ref|ZP_01911246.1| exodeoxyribonuclease III [Plesiocystis pacifica SIR-1] gi|149816290|gb|EDM75794.1| exodeoxyribonuclease III [Plesiocystis pacifica SIR-1] Length = 280 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 32/308 (10%), Positives = 80/308 (25%), Gaps = 70/308 (22%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + + + ++SWNIN L + DIV +QE+ Sbjct: 13 TSSDALTVLSWNINGLRAAAKKGFG---------------AWLAECGGDIVGVQEI---- 53 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + F + E +H + ++ + + + + ++ Sbjct: 54 ---RAFKEQLDDATAEPEGWHSHFRSAV-RPGYSGVGLYSRAP----ADKVEVELGEARF 105 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R + +++V +++ + + + + + + + + +K Sbjct: 106 DDEGRVQLA-----RFGRLFVANVYFPNG----NGRDRDNSRVPYKLDFYRAVFELVERK 156 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSR 244 + ++ GDFN + I + + Sbjct: 157 RRGGYRVLVMGDFNTAHEAIDLARPKQNVKTSGFLPEEREELDRWIRAGWIDTFRSLEPG 216 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + IDY + N + + SDH Sbjct: 217 PGHYSWWSQRGTARERNVGWRIDYVLASPN-----------VEPFLREAFIWPEVPGSDH 265 Query: 296 CPISIDYD 303 CP+ + D Sbjct: 266 CPVGVRLD 273 >gi|313632791|gb|EFR99747.1| exodeoxyribonuclease III [Listeria seeligeri FSL N1-067] Length = 251 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 83/304 (27%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L +Y ++DADI LQE A Sbjct: 1 MKLISWNVNGLRAAVKKGF---------------LEYFDSVDADIFCLQETK-LQAGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ K + Q + D+ R Sbjct: 45 LDLPAYKDYWN----------YAVKKGYSGTXXFTKKEPLSVQYGLGIEEHDTEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +K +++ ++ + + ++ + + Sbjct: 91 -----VITLEFEKFFMVTVYTPN-------SQAELKRLDYRMTFEDAILAYVKK-LDETK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + F +A Sbjct: 138 PVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFTAFLEAGFVDSFRYFYPDLEDAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + L+ + SDHCP+ Sbjct: 198 SWWSYRMNARARNIGWRIDYFVVSERLKDNLVDAKIHPDVL-----------GSDHCPVE 246 Query: 300 IDYD 303 ++ + Sbjct: 247 LELN 250 >gi|291165919|gb|EFE27966.1| exodeoxyribonuclease III [Filifactor alocis ATCC 35896] Length = 251 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 78/305 (25%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + + K DADI LQE Sbjct: 1 MKLISWNVNGIRACVKKGF---------------LDFFKETDADIFCLQETKLQEG-QIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + + D R Sbjct: 45 LELEGYHQYWN----------YAERKGYSGTAIFTKQEPLSVSYGLGIEEHDQEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + + L + Sbjct: 91 -----VITLEFDNFYMVTVYTPNSKNELLRLDYRMVWEDEFRSYLLRLNE--------TK 137 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + T+ + + F A Sbjct: 138 PVIVCGDLNVAHQEIDLKNPKTNQKNAGFTIEERTKMSTLLDSGFIDTFRFFYPELEGAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ Q + L + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFLTSQELKENLKDAKIHSDIL-----------GSDHCPVE 246 Query: 300 IDYDF 304 +D ++ Sbjct: 247 LDIEW 251 >gi|26398003|sp|P59115|PHL1_LEPIN RecName: Full=Sphingomyelinase C 1; AltName: Full=Sphingomyelin phosphodiesterase 1; Short=SMase 1; Flags: Precursor Length = 597 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 44/302 (14%), Positives = 96/302 (31%), Gaps = 26/302 (8%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P ++S ++++S +I +S W + + + Y K + DI+ + + Sbjct: 115 PNSSSADIGIKILSHSI--FMAPTNLSSWGDLGQEERAQRIASSSYIK--NQDIIVFEGL 170 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQ 126 NA + K Y T + K + + + K + Sbjct: 171 SHNNAEKILLEKIRSEYPYQTNVVGRTKKGWNATLGAYTTSPMANGGVIIVSKWPIEEKV 230 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + + N+ + + +GKK V+ L++ ++ ++ Sbjct: 231 QYIFNNSNCGQDQYYNKGFAYVKINKDGKKFHVIGTQLQAREPDC-----FNSGETIRKL 285 Query: 187 QAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 Q +K +I + +I GD N D K + P D++ Sbjct: 286 QLNDIKSFIDSKDIPKDETVLITGDLNIIKGSNEYFDMISKLNVNEPRYVGVPFTLDTKT 345 Query: 246 NANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----KRLSDHCP 297 NA I +DY ++ + + + ++ + + K SD P Sbjct: 346 NALAAYYYEKEKPIYLDYILVSKLHAQPPVWQNLAYDPISNTTWKRSDGYTSYEFSDRYP 405 Query: 298 IS 299 + Sbjct: 406 VY 407 >gi|307324263|ref|ZP_07603471.1| exodeoxyribonuclease III Xth [Streptomyces violaceusniger Tu 4113] gi|306889994|gb|EFN20972.1| exodeoxyribonuclease III Xth [Streptomyces violaceusniger Tu 4113] Length = 282 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 32/307 (10%), Positives = 76/307 (24%), Gaps = 71/307 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYN 78 + + + + N+N L + AD+V LQE+ Sbjct: 14 PEVLTVTTVNVNGLRAAAKKGFGP---------------WLDATAADVVCLQEVRAEPKE 58 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 V + W + ++ + ++V + + D Sbjct: 59 LPEAVREPDGWHVVHAP----------AAAKGRAGVSVYARRELEGVRVGFGSSEFDGSG 108 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R + V++ G + V ++L S ++ + + L++ Sbjct: 109 R-------YVEVDLPG--VTVGSLYLPSGEVGTDRQDEKERFMAEFLPYLKELRERA--- 156 Query: 199 KESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 ++AGD+N + + Sbjct: 157 AAGGREALVAGDWNIAHQEADLKNWKANQKKSGFLPEERAWLTSVFEEAGYVDVVRALHP 216 Query: 243 SRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + IDY + ++ + + +R S Sbjct: 217 DVAGPYSWWSYRGRAFDNDAGWRIDYQIATPGLAGRAVKA-------VVERAPAYDQRWS 269 Query: 294 DHCPISI 300 DH P+++ Sbjct: 270 DHAPVTV 276 >gi|294787015|ref|ZP_06752269.1| exodeoxyribonuclease III [Parascardovia denticolens F0305] gi|315226658|ref|ZP_07868446.1| exodeoxyribonuclease [Parascardovia denticolens DSM 10105] gi|294485848|gb|EFG33482.1| exodeoxyribonuclease III [Parascardovia denticolens F0305] gi|315120790|gb|EFT83922.1| exodeoxyribonuclease [Parascardovia denticolens DSM 10105] Length = 277 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 33/306 (10%), Positives = 74/306 (24%), Gaps = 56/306 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ V+WNI++L+ ++ + R + + +QE A Sbjct: 1 MKFVTWNIDSLNAALTGDSERSRLSR------QVLHDIAACSPQVFAIQETKLPAAGPSK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-VLQQSYPLLGAKDSFSRAGN 142 K + + + S ++ + + + Sbjct: 55 KQKASLESIFPGYWIAWRSSQEPARKGYAGTMCLYRPEGGQEVSPLYPQIGAPEPMDSEG 114 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R L +E G ++ D++ + Q L Sbjct: 115 R---ILTLEFPG--FYLTDVYTPNSGDGLRRLEERQVWDDRYRSYLQDLDQV-------- 161 Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P + GDFN D + + F + ++ Sbjct: 162 KPVIACGDFNVAHEEIDLAHPASNRRSAGFTDEERDKFGQLLDAGFADTFRRLHPNQAGV 221 Query: 248 NKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDY+++ + S + DH P Sbjct: 222 YTWWAQRAVTSKANNSGWRIDYWLVSDRLMDKVRGVSVMDTGERR-----------DHAP 270 Query: 298 ISIDYD 303 + ++ D Sbjct: 271 LVMEID 276 >gi|77464426|ref|YP_353930.1| exodeoxyribonuclease III [Rhodobacter sphaeroides 2.4.1] gi|221640316|ref|YP_002526578.1| Exodeoxyribonuclease III Xth [Rhodobacter sphaeroides KD131] gi|332559315|ref|ZP_08413637.1| exodeoxyribonuclease III [Rhodobacter sphaeroides WS8N] gi|77388844|gb|ABA80029.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides 2.4.1] gi|221161097|gb|ACM02077.1| Exodeoxyribonuclease III Xth [Rhodobacter sphaeroides KD131] gi|332277027|gb|EGJ22342.1| exodeoxyribonuclease III [Rhodobacter sphaeroides WS8N] Length = 262 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 33/306 (10%), Positives = 69/306 (22%), Gaps = 71/306 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L +WNIN L+ + DI+ LQE S Sbjct: 2 TFTLATWNIN----------------SVRLREALVSRLLTEEMPDILCLQECKSPV---- 41 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + L H + +A+ K V + + Sbjct: 42 -----EKMPLEAFRALGYHWCVARGQKSYNGVAILSKLPLVDAGDHDFADLGHARH---- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V +E + + + ++ + D + + ++DW Sbjct: 93 ---VSAALENG---VTIHNCYVPAG--GDIPDREQNVKFGQKLDYLTRMRDWCRADTPKK 144 Query: 203 VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N ++ D + + I ++ Sbjct: 145 A--ILVGDLNIAPREDDVWNHKSLLKIVSHTPIEVDHLNALMEAGAWIDVTRKDLPEGRL 202 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + SDH P Sbjct: 203 YSWWSYRSPDWEAADKGRRLDHIWATPDIVNAAHGS-------RILKAARGWLQPSDHAP 255 Query: 298 ISIDYD 303 + +D Sbjct: 256 VFATFD 261 >gi|45658469|ref|YP_002555.1| hemolysin [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|73921746|sp|Q72P44|PHL1_LEPIC RecName: Full=Sphingomyelinase C 1; AltName: Full=Sphingomyelin phosphodiesterase 1; Short=SMase 1; Flags: Precursor gi|45601712|gb|AAS71192.1| hemolysin [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 596 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 44/302 (14%), Positives = 96/302 (31%), Gaps = 26/302 (8%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P ++S ++++S +I +S W + + + Y K + DI+ + + Sbjct: 114 PNSSSADIGIKILSHSI--FMAPTNLSSWGDLGQEERAQRIASSSYIK--NQDIIVFEGL 169 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQ 126 NA + K Y T + K + + + K + Sbjct: 170 SHNNAEKILLEKIRSEYPYQTNVVGRTKKGWNATLGAYTTSPMANGGVIIVSKWPIEEKV 229 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + + N+ + + +GKK V+ L++ ++ ++ Sbjct: 230 QYIFNNSNCGQDQYYNKGFAYVKINKDGKKFHVIGTQLQAREPDC-----FNSGETIRKL 284 Query: 187 QAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 Q +K +I + +I GD N D K + P D++ Sbjct: 285 QLNDIKSFIDSKDIPKDETVLITGDLNIIKGSNEYFDMISKLNVNEPRYVGVPFTLDTKT 344 Query: 246 NANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----KRLSDHCP 297 NA I +DY ++ + + + ++ + + K SD P Sbjct: 345 NALAAYYYEKEKPIYLDYILVSKLHAQPPVWQNLAYDPISNTTWKRSDGYTSYEFSDRYP 404 Query: 298 IS 299 + Sbjct: 405 VY 406 >gi|254236851|ref|ZP_04930174.1| hypothetical protein PACG_02871 [Pseudomonas aeruginosa C3719] gi|126168782|gb|EAZ54293.1| hypothetical protein PACG_02871 [Pseudomonas aeruginosa C3719] Length = 379 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 33/328 (10%), Positives = 93/328 (28%), Gaps = 68/328 (20%) Query: 21 AQKVRLVSWNINTLSEQ-----EGVSLWKNSVKRTTSD-----YTLLRQYAKNLDADIVF 70 Q +++++WNI L+ + + + +R T++ + + ++ D+V Sbjct: 70 GQALKVMTWNIQYLAGKRYVFWDDLPDATGPDQRPTAEDLAFTLDEVVRVIRDEQPDLVL 129 Query: 71 LQEMGSYNAVAK-------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 LQE+ ++ + + + + A R Sbjct: 130 LQEIDDGSSATDDQDQLALIQERINDLYHCSAQAYEWKSAFVPTPHIFGSVGRKQATLSR 189 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLEN 175 + ++ P G R A+ + G ++ VL+ + + Sbjct: 190 YRIDSAERRQLPPRDGGLFDRLFGPRPAILVSHLPIDGGGELAVLN----------ARFD 239 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND------------- 222 + L +Q + + + + + P+++ GD N Sbjct: 240 RPQANDDTLERQVETTRTLLDELQARRTPWLLGGDLNLLPPGQYPYLLAPLRAPYREDSE 299 Query: 223 --------DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 +++ + + + +DY + Sbjct: 300 LGILSGRFPMVPSLEEASGVDQVRWYTHFPNDPRV-QGPDRTLDYLFHSPSL-------- 350 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +S ++S+H P++ + Sbjct: 351 ---TRLDARVRRSDTLQISNHLPLAARF 375 >gi|298376437|ref|ZP_06986392.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] gi|298266315|gb|EFI07973.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] Length = 628 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 92/310 (29%), Gaps = 66/310 (21%) Query: 1 MIRKYVLALVFF-LVPCTASVAQ--------KVRLVSWNINTLSEQEGVSLWKNSVKRTT 51 M + ++ A+V +P ++AQ +R++S+NI + V+ Sbjct: 10 MRKWFIWAIVMIGCLPINKALAQQSGDAERNTLRIMSYNIRNGRGMDEVT---------- 59 Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 D + + + + D+V +QE+ S + + ++ + Sbjct: 60 -DLGRIAEAIRKVAPDVVAVQEVDSVTGRSGGIDVLRTLGERTLM-FPTYAPAIDFDGGK 117 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 + + K V + L G R R + + E + HL Sbjct: 118 YGVGMLSKEKPVSYRYIALPG------REEERVLLWVEFE----RYIFCCTHLSLTP--- 164 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S +L ++A + P IAGD+N + F I + Sbjct: 165 ---EDRMLSLPILRREAA----------SAHKPLFIAGDWNATAHSP-----FITEISKD 206 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 L+ PK+ +DY + + S Sbjct: 207 FQLLSNPKQA-----TFPAFTPDSCLDYIAGYVKNGQPFTRLSAWV---------PEEAV 252 Query: 292 LSDHCPISID 301 SDH P+ + Sbjct: 253 ASDHRPVVTE 262 >gi|149914506|ref|ZP_01903036.1| exodeoxyribonuclease III [Roseobacter sp. AzwK-3b] gi|149811299|gb|EDM71134.1| exodeoxyribonuclease III [Roseobacter sp. AzwK-3b] Length = 262 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 69/305 (22%), Gaps = 71/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 L +WNIN++ +EG+ + + + DI+ LQE S Sbjct: 3 FTLATWNINSVRLREGL----------------VARLLREEAPDILCLQECKSPVDK--- 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S L + +A+ K + Sbjct: 44 ------IPAESFAALGYPYMVARGQKGYNGVAILSKLPIEDAGDMDFAALGHARH----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V +E V+ + D + + ++DW + Sbjct: 93 --VAGRLENG-----VVIHNFYVPAGGDIPDREKNEKFGQKLDYLTEMRDWFRDGRPQKA 145 Query: 204 PFVIAGDFNRKINYLG--NNDDFWKTID-------------PNDSLIRFPKEKDSRCNAN 248 ++ GD N ++ K + + + Sbjct: 146 --ILVGDLNIAPREDDVWSHKQLLKVVSHTPIEVAHLGDVQEAGGWVDVTRSDIPEGQLY 203 Query: 249 KNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +D+ + ++ SDH P+ Sbjct: 204 SWWSYRAKDWDAADKGRRLDHVWASADLRHAFHSS-------RVLRAARGWEQPSDHAPV 256 Query: 299 SIDYD 303 +D Sbjct: 257 FATFD 261 >gi|25029135|ref|NP_739189.1| putative exodeoxyribonuclease III [Corynebacterium efficiens YS-314] gi|259505870|ref|ZP_05748772.1| exodeoxyribonuclease III [Corynebacterium efficiens YS-314] gi|23494422|dbj|BAC19389.1| putative exodeoxyribonuclease III [Corynebacterium efficiens YS-314] gi|259166544|gb|EEW51098.1| exodeoxyribonuclease III [Corynebacterium efficiens YS-314] Length = 261 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 75/301 (24%), Gaps = 62/301 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+V+WN+N + + + D D++ +QE + Sbjct: 1 MRIVNWNVN----------------SARTRVDRMVDFLIRHDVDVLAVQETKCRDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y R I + +A+ + Q+ + Sbjct: 41 ------QFPYERFREIGYEVAHFGLSQWNGVAIISRVGIEDVQTSFPGQPGFDKDPGAEQ 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KKES 201 + + V +++ + + Y + L++ + + Sbjct: 95 AIEARAIGAGCGGVRVWSLYVPNGREIADPHYDYK------LRWLFALRNHVADVLRANP 148 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 ++ GDFN ++ + P Sbjct: 149 EEKMILLGDFNIAPTDQDVWDISAFEGHTHVTEPERAAFQQLIEAGLTETSPGPGTFTYW 208 Query: 247 ANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 K R + ID+ + D + GK SDH P+ +DY Sbjct: 209 DYKGARFLKGEGMRIDFQLATPALTADHTF---------VDVEERGGKGASDHAPVIVDY 259 Query: 303 D 303 Sbjct: 260 S 260 >gi|313109395|ref|ZP_07795356.1| putative nuclease or phosphatase [Pseudomonas aeruginosa 39016] gi|310881858|gb|EFQ40452.1| putative nuclease or phosphatase [Pseudomonas aeruginosa 39016] Length = 379 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 33/328 (10%), Positives = 93/328 (28%), Gaps = 68/328 (20%) Query: 21 AQKVRLVSWNINTLSEQ-----EGVSLWKNSVKRTTSD-----YTLLRQYAKNLDADIVF 70 Q +++++WNI L+ + + + +R T++ + + ++ D+V Sbjct: 70 GQALKVMTWNIQYLAGKRYVFWDDLPDATGPDQRPTAEDLAFTLDEVVRVIRDEQPDLVL 129 Query: 71 LQEMGSYNAVAK-------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 LQE+ ++ + + + + A R Sbjct: 130 LQEIDDGSSATDDQDQLALIQERINDLYHCSAQAYEWKSAFVPTPHIFGSVGRKQATLSR 189 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLEN 175 + ++ P G R A+ + G ++ VL+ + + Sbjct: 190 YRIDSAERRQLPPRDGGLFDRLFGPRPAILVSHLPIDGGGELAVLN----------ARFD 239 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND------------- 222 + L +Q + + + + + P+++ GD N Sbjct: 240 RPQANDDTLERQVETTRTLLDELQARRTPWLLGGDLNLLPPGQYPYLLAPLRAPYREDSE 299 Query: 223 --------DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 +++ + + + +DY + Sbjct: 300 LAVLSGRFPMVPSLEEASGVDQVRWYTHFPNDPRV-QGPDRTLDYLFHSPSL-------- 350 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +S ++S+H P++ + Sbjct: 351 ---TRLDARVRRSDTLQISNHLPLAARF 375 >gi|251790113|ref|YP_003004834.1| Endonuclease/exonuclease/phosphatase [Dickeya zeae Ech1591] gi|247538734|gb|ACT07355.1| Endonuclease/exonuclease/phosphatase [Dickeya zeae Ech1591] Length = 256 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 37/293 (12%), Positives = 81/293 (27%), Gaps = 49/293 (16%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 S+ +++ N + S LR+ +++ AD+V LQE+ Sbjct: 5 SQPSLGFSFTVLTINTH----------KGFSALNRRFILPELREAVRSVSADVVCLQEVL 54 Query: 76 SYNAVAKV----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYP 129 ++ + +P F + +++ + AV ++ Sbjct: 55 GRHSTHPLQVEHWPDTPHYEFLAETMWNDYAYGRNAVYPEGEHGNAVLSHFPIFSYRNLD 114 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + S S R + ++++ + + + + + S QQ Sbjct: 115 V-----SVSDKARRGILHCVLKVPNRDLHIHVVCVHMGLT-----------ASHRRQQLA 158 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L D + + P V+AGDFN F + Sbjct: 159 LLCDLLDT-LPADAPLVVAGDFNDWQM-----KACALLKRRAGLEEVFSQHLGKPARTFP 212 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + LSDH P++++ Sbjct: 213 ARFPLLRLDRIYVRNAR-----------TSIPRLLPSKPWSHLSDHAPLAVEI 254 >gi|90417808|ref|ZP_01225720.1| exodeoxyribonuclease III [Aurantimonas manganoxydans SI85-9A1] gi|90337480|gb|EAS51131.1| exodeoxyribonuclease III [Aurantimonas manganoxydans SI85-9A1] Length = 276 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 79/303 (26%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ S+NIN ++ +L ++ + D V LQE+ S + Sbjct: 1 MKIASFNINGVNG----------------RLPVLLRWLAEAEPDAVCLQELKSPDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + +A+ + L+ L G D Sbjct: 41 ------KFPIDAIREAGYGAIWHGQKSWNGVAILARGTDPLETRRGLPGDDDDHQSRYLE 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 AV K + + ++L + + Y + + + Sbjct: 95 AAV--------KGVLIGCLYLPNGNPAPGPKFDYK------LRWLGRFANHAADLMATGA 140 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249 P V+AGD+N L + + + + Sbjct: 141 PVVLAGDYNVIPTELDVYKPEHWVDDALFRPEVREAFHRLLDAGWTDAIRSLHPEASIYT 200 Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +D+ ++ L+ + ++ SDH P+ I Sbjct: 201 FWDYLRNAWGRDAGLRLDHLLLSPTLAPRLLAAGVHRDV-------RGWEKASDHAPVWI 253 Query: 301 DYD 303 + Sbjct: 254 EIT 256 >gi|300811911|ref|ZP_07092372.1| exodeoxyribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497108|gb|EFK32169.1| exodeoxyribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 275 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 85/304 (27%), Gaps = 56/304 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL+SWNI++L+ + + + R + + +LD D++ LQE + Sbjct: 1 MRLISWNIDSLNAALTGTSPRAEMTRG------VLKNLHDLDPDVLALQETKLPASGPSK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + S + + K + P +GA + G Sbjct: 55 KHQAALADLFPEYDFVWRSSMEPARKGYAGTMFLYKKGLDPLVTRPEIGAPEPMDFEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V ++ + + L + Sbjct: 114 -----ILTLEFPDFYVTQVYTPNAGNGLVRLGDRQEWDKCYRAYLEEL--------DKKK 160 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + +GDFN + + F + Sbjct: 161 PVLASGDFNAAYQEIDLKHPKNNHHSAGFTDEERAGFGQLLAAGFTDTFRQIHGQVEGVY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY+++ + + ++ G+R DHCPI Sbjct: 221 SWWAQRVRTAKANNSGWRIDYWLVSNRLADQVEKS----------EMIETGERA-DHCPI 269 Query: 299 SIDY 302 ++ Sbjct: 270 LLEI 273 >gi|189466093|ref|ZP_03014878.1| hypothetical protein BACINT_02463 [Bacteroides intestinalis DSM 17393] gi|189434357|gb|EDV03342.1| hypothetical protein BACINT_02463 [Bacteroides intestinalis DSM 17393] Length = 254 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 88/303 (29%), Gaps = 73/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+N L G L ++ + AD+V +QE Sbjct: 1 MKIITYNVNGLRAAVGKGLP---------------EWLEQEQADVVCIQETK-------- 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H + ++ +A+ K + G R Sbjct: 38 LQPDQYPEEALSALGYKHYLYSAQKKGYSGVAILTKREP----DHVEYGMGMEEYDNEGR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + I V+ ++ S D + + + ++++T ++S Sbjct: 94 F-----IRADFGDISVVSVYHPSGTSGDERQ-------AFKMVWLEKFQEYVTGLRKSRP 141 Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GD+N + +D W T N I + Sbjct: 142 KLILCGDYNICHEPIDIHDPIRNATNSGFLPEEREWMTRFLNAGFIDTFRLLHPEQQEYT 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY ++ + + + SDHCP+ + Sbjct: 202 WWSYRFNSRAKNKGWRIDYCMVTE--LVRPLLREARILNDAVH---------SDHCPMLL 250 Query: 301 DYD 303 D + Sbjct: 251 DIE 253 >gi|254932552|ref|ZP_05265911.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes HPB2262] gi|293584109|gb|EFF96141.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes HPB2262] gi|328476050|gb|EGF46765.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes 220] gi|332310743|gb|EGJ23838.1| Endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes str. Scott A] Length = 257 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 39/282 (13%), Positives = 73/282 (25%), Gaps = 36/282 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + ++NI K L + D + ++E + + Sbjct: 2 FSVTTFNIRFDDTS-------ERKKSWELRKILTKSLLDKYQWDFMGVEEPLLPQ-MRDM 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 W F + ++ + P + + S + R Sbjct: 54 KEMQDWDYFGVGRDDGFEKGEFTAVFYNSTRFTLLQEGHFWLSETPEVPSIHSTAM-FPR 112 Query: 144 RAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 V +E +GK+ ++ + HL A L + Sbjct: 113 ICVWGKLEDSTDGKQFYIFNTHLDHIS-------------EEARLFASQLLLHKASLIQE 159 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPID 258 +P ++ GDFN + + N + D K + + LR ID Sbjct: 160 DLPVILLGDFNTEPSTPTYNLITQRYQDAQLLSKTPVKGPLGSFHDFQPLRPESELEKID 219 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 Y + F Y + G SDH P+ Sbjct: 220 YIFVSNE---------FHICSYETSTDEIDGCSASDHFPVMA 252 >gi|169776017|ref|XP_001822475.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus oryzae RIB40] gi|83771210|dbj|BAE61342.1| unnamed protein product [Aspergillus oryzae] Length = 438 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 87/313 (27%), Gaps = 35/313 (11%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +R V A+ Q ++S+N+ L + + + Sbjct: 1 MRSIAYLASGLPVALAATSGQ-FDVLSFNVAGLPAILNGNEVPGDKTNNSK---AIGAKF 56 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 D D++ +QE +Y+A + + + V Sbjct: 57 AEYDYDVIHVQEDFNYHA---------YIYETDDHPYRTATSGGAGIGSGLNTLANYPWV 107 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPS 180 + + + + V + G + ++H + D + + Sbjct: 108 DFERVKWETCSDASGSDCLTPKGFTTMRVRFDEGVYVDFYNLHTDAGSETDDVTARSAN- 166 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIR 236 Q + D+I + ++ GD N + G N + +P LI Sbjct: 167 -------LQQVADYI-GNNSAGNAVLVFGDTNARYTSSGENIRVFGTEQNMTNPWVELIL 218 Query: 237 FPKEKDSRCNAN-----KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 E + +D + I+ S + Y + G Sbjct: 219 NGVEPTEGTDPWMCDNPTTNNTCETVDKIFYRGS---RSIELSATFWSYVGTKFELDGHI 275 Query: 292 LSDHCPISIDYDF 304 LSDH P++ ++ + Sbjct: 276 LSDHNPVTSNFTW 288 >gi|21357231|ref|NP_647790.1| CG12034 [Drosophila melanogaster] gi|32172461|sp|Q9VZS6|NSMA_DROME RecName: Full=Putative neutral sphingomyelinase gi|15291739|gb|AAK93138.1| LD24865p [Drosophila melanogaster] gi|23092890|gb|AAF47741.2| CG12034 [Drosophila melanogaster] gi|220944946|gb|ACL85016.1| CG12034-PA [synthetic construct] gi|220954776|gb|ACL89931.1| CG12034-PA [synthetic construct] Length = 442 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 40/284 (14%), Positives = 81/284 (28%), Gaps = 35/284 (12%) Query: 30 NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89 NI + + + + DIV LQE+ + + Sbjct: 12 NIWGIPYVSSDRRP---------RIDAICKELASGKYDIVSLQEVWAQEDSELLQKG--- 59 Query: 90 CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV-----LQQSYPLLGAKDSFSRAGNRR 144 TE ++ HS + + + V K + G + Sbjct: 60 -----TEAVLPHSHYFHSGVMGAGLLVLSKYPILGTLFHAWSVNGYFHRIQHADWFGGKG 114 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + + G+ + + + HL + +N + QA +I + + Sbjct: 115 VGLCRILVGGQMVHLYNAHLHA-----EYDNANDEYKTHRVIQAFDTAQFIEATRGNSAL 169 Query: 205 FVIAGDFNRKINYLGNNDDFW--KTIDPNDSLIRFPKEKDSRCNANKNLRNKI----PID 258 ++AGD N + + + K +D DS E + +K R + ID Sbjct: 170 QILAGDLNAQPQDISYKVLLYTSKMLDSCDSDSFRTNECEHNSYTSKQARERNPLGIRID 229 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + E L + + SDH + Sbjct: 230 HIFVRGG--DHVNAEIAEYKLPFPERVPGEKFSFSDHEAVMAKL 271 >gi|317126375|ref|YP_004100487.1| exodeoxyribonuclease III [Intrasporangium calvum DSM 43043] gi|315590463|gb|ADU49760.1| Exodeoxyribonuclease III [Intrasporangium calvum DSM 43043] Length = 263 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 31/306 (10%), Positives = 73/306 (23%), Gaps = 70/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N S + + D D++ LQE + Sbjct: 1 MRIATWNVN----------------SIRSRVDRVTDWLVRSDVDVLALQETKARED---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + R + + +A+ + + +G Sbjct: 41 ------QFPHDRFRELGYEVAHHGLSQWNGVAIVSRVGIEDVR----VGFDGMPGWGDPA 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202 A + + + +++ + L+ Y L D Sbjct: 91 AAEARAIGALCGGVRIWSLYIPNGRTLEDPHLLYKLD------WLAALADAGRSWLADDP 144 Query: 203 -VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P + GD+N + ++ + + Sbjct: 145 SAPIALLGDWNIAPFDEDVWSVPFYEGRTHTSPRERAAFQAVVDAGFADVV-RPHCPGPG 203 Query: 247 ANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ + + + + D +GK SDH P Sbjct: 204 VYTYWDYVQLRFQKGRGMRIDFALCSPALARRVTGAAI-------DREARKGKGASDHAP 256 Query: 298 ISIDYD 303 + + + Sbjct: 257 VVFEIE 262 >gi|282880228|ref|ZP_06288945.1| endonuclease/exonuclease/phosphatase family protein [Prevotella timonensis CRIS 5C-B1] gi|281305888|gb|EFA97931.1| endonuclease/exonuclease/phosphatase family protein [Prevotella timonensis CRIS 5C-B1] Length = 316 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 31/315 (9%), Positives = 86/315 (27%), Gaps = 46/315 (14%) Query: 24 VRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD------- 65 +V N L + + SL + + R + + Q + Sbjct: 12 FTVVELNCENLFDCQHDSLKHDEQFLPTSDYHWTPHRYWTKVNRIGQTILSCGESANGWS 71 Query: 66 -ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 D+V L E+ + + + + ++ + S ++ +A+ Sbjct: 72 LPDMVGLCEVENDSCLVALTRRS-----LLRHARYEYVMTHSPDERGIDVALLYSPFSFQ 126 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + + R + I G + V +H S + ++ Sbjct: 127 LLDWRAIPIHPVKDMRPTRDVLYARGRIVTGDTLHVFVVHAPSRMGGEPFTRSHRRIVGD 186 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + QA ++ + ++ GDFN + + + + + Sbjct: 187 ILLQAIDSIQSVSTRPR----ILVMGDFNDYSSDKNILRLVQSGLVEVSANAKGTHGAKA 242 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY--------------NEDDIKSRG 289 + +D+ +D+++ + + + + Sbjct: 243 ---TYRFRGEWGSLDHIFLDKSSAALVQECYVHDAPFLLEKDEKYGGVKPRRNYQGPRYL 299 Query: 290 KRLSDHCPISIDYDF 304 SDH P+ + ++ Sbjct: 300 NGFSDHLPLVMRINW 314 >gi|227893773|ref|ZP_04011578.1| exodeoxyribonuclease III [Lactobacillus ultunensis DSM 16047] gi|227864418|gb|EEJ71839.1| exodeoxyribonuclease III [Lactobacillus ultunensis DSM 16047] Length = 275 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 81/303 (26%), Gaps = 56/303 (18%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L+SWNI++L+ + + R + + DI+ +QE Sbjct: 3 LISWNIDSLNAALTGTSSRAGETR------EVLDKIHAANPDIIAIQETKLRAIGPTKKH 56 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + + S + + K + SYP++GA G Sbjct: 57 QAVLAEKFPEYNYVWRSSEEPARKGYAGTMYLYKKELTPKASYPVIGAPAPMDSEGR--- 113 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++ + K +V ++ + + L + P Sbjct: 114 ---MITLEFDKFFVTQVYTPNSGNGLRRLADRQVWDQKYVDYLEAL--------DKQKPV 162 Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + +GDFN + + F K + + Sbjct: 163 LASGDFNCAHTEIDLKHPENNHHSAGFTDEERADFTNLLNGGFTDTFRKIHGNITDVYSW 222 Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY+++ +++ + DHCPI + Sbjct: 223 WAQRVRTAKANNSGWRIDYWLVSNRIADKVVRSEMIDTGKRA-----------DHCPILL 271 Query: 301 DYD 303 + + Sbjct: 272 EIN 274 >gi|182412293|ref|YP_001817359.1| endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] gi|177839507|gb|ACB73759.1| Endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] Length = 257 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 40/295 (13%), Positives = 82/295 (27%), Gaps = 53/295 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAV 80 + RL+ +N+ G + + + DAD++ LQE+ Sbjct: 2 KTFRLLQFNMQF-----GQGWDEAAPDAAPIRIEQTIAEIRRHDADVIMLQEVEHALPEG 56 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIH-----TAIAVRKKNVRVLQQSYPLLGAKD 135 +V P + T R + D +A+ + ++ L Sbjct: 57 RQVEPAPNYTRLRETLRDYDSWFAYPKADPRELPFGIGLAIFSRTPLRERRKIDLPSPPV 116 Query: 136 SFSRAGN------RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 F G R + + G+++ + + HL +F L + + + + Sbjct: 117 EFEFEGRRTTPTDRAMIGAKTTLLGREVQLFNTHLLAFFMLHTSSARHPEQRRRVVAELA 176 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 P +++GDFN +D P + Sbjct: 177 A----------CEGPTLLSGDFNVSG-----HDALIAQFAPAGFSTVQRTKT-------T 214 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R +D+ + S + SDH + D++F Sbjct: 215 WRRRPYILDHIFYNAPLRAVQHAVSPTL--------------ASDHHALVADFEF 255 >gi|170721841|ref|YP_001749529.1| exodeoxyribonuclease III Xth [Pseudomonas putida W619] gi|169759844|gb|ACA73160.1| exodeoxyribonuclease III Xth [Pseudomonas putida W619] Length = 260 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 78/304 (25%), Gaps = 70/304 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + +R+ ++NIN + L + + D+ LQE+ + + Sbjct: 2 KPLRIATFNINGIGS----------------RLPALLAWLEREKPDVACLQELKAADT-- 43 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + +A+ ++ + L+ L G +D Sbjct: 44 --------KFPREAIEAAGYGCLYMGQPSWNGVAILARDSQPLEVRRGLPGMEDDSQSRY 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 AV + + V ++L + + Y + + L S Sbjct: 96 LEAAV--------QGVLVGCLYLPNGNPQPGPKFEYK------LRWFECLVKHAHDLLGS 141 Query: 202 LVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCN 246 P V+AGDFN + ++ + + Sbjct: 142 GHPTVLAGDFNVVPTDFDIYNPKSWLKDALLQPESRNCYQALLEQGWTDAIRQLYPDERI 201 Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ + L D + SDH P Sbjct: 202 YTFWDYFRNHWARNAGLRIDHLLLSPDIASHLKAGGV-------DAWVRNEPKPSDHAPA 254 Query: 299 SIDY 302 I+ Sbjct: 255 WIEL 258 >gi|309775417|ref|ZP_07670420.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 3_1_53] gi|308916806|gb|EFP62543.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 3_1_53] Length = 254 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 79/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RLVSWN+N + + +DADI +QE Sbjct: 1 MRLVSWNVNGIRACMQKGFM---------------DFFNEIDADIFCIQETKMQPG-QLE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ + + V K + + D R Sbjct: 45 IETPLYHQYMNSAEKKGY----------SGTMVFSKQEPIHVSYGLGIEEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + + L + Sbjct: 91 -----VITCEYEDFYLVCVYTPNSKDGLLRLDYRMEWEDAFRTYLHKLNE--------TK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N + + + + + + Sbjct: 138 SVLVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERNKMSVLLDSGFIDSYRYLYPEQEGVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ ++A + + +Y SDHCP+S Sbjct: 198 SWWSYRFKAREKNAGWRIDYFLVSEDAKDGIREAKIHTDIY-----------GSDHCPVS 246 Query: 300 IDYD 303 ++++ Sbjct: 247 LEFE 250 >gi|282878661|ref|ZP_06287430.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] gi|281299206|gb|EFA91606.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] Length = 248 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 38/262 (14%), Positives = 69/262 (26%), Gaps = 29/262 (11%) Query: 45 NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104 + + ++ L++ + + DI QE + V + + R Sbjct: 6 DGANQWSNRKELVKSLIRFHEFDIFGTQEGFKHMLVQ--IAELKQYAWIGEGRDGGDEGE 63 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDI 162 S + P + NR +I+GK ++ + Sbjct: 64 HSAIFYRKDRFDLLDSGNFWYSETPEKVGLGWDATCCNRICSWGKFREKISGKIFFLFNS 123 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 H F S A+ L I + + GDFN Sbjct: 124 H-----FDHQGVIARRES-------ARLLLQKIKSIAGTNATVISTGDFNATPESEPIRI 171 Query: 223 DFWK--TIDPNDSLIRFPKEKDSRCNANKNL--RNKIPIDYFVMDQNAYKFLIQESFSEI 278 +D I+ P N K ID+ + ++ S Sbjct: 172 LLNDGLLLDSYKISIQPPYGTYGTSNGWKIREKGKDQRIDHIFVTKD---------VSIQ 222 Query: 279 LYNEDDIKSRGKRLSDHCPISI 300 Y + G+ SDH P+ + Sbjct: 223 KYGVINDIPYGQFPSDHYPVMV 244 >gi|237717228|ref|ZP_04547709.1| conserved hypothetical protein [Bacteroides sp. D1] gi|237718983|ref|ZP_04549464.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|262405995|ref|ZP_06082545.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294647971|ref|ZP_06725522.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294806915|ref|ZP_06765740.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|298480085|ref|ZP_06998284.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. D22] gi|229443211|gb|EEO49002.1| conserved hypothetical protein [Bacteroides sp. D1] gi|229451761|gb|EEO57552.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|262356870|gb|EEZ05960.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292636687|gb|EFF55154.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294445944|gb|EFG14586.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|298273894|gb|EFI15456.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. D22] Length = 361 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 86/305 (28%), Gaps = 67/305 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++++S+N+ + + E + Y + +ADI+ LQE + Sbjct: 99 GSIKILSYNVMSFNNLEKKDGKNP-----------VLSYLVDSNADIICLQEYNTATNKK 147 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + ++ + H + +A K + + + Sbjct: 148 YLTEQDIKKALKAYPYQSVHQQG----KGDVQLACFSKFPILSIHPIKYESNYNGSMKY- 202 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------- 178 ++ +N + +++ HL+S Y Sbjct: 203 -------VLNVNNDTLTLINNHLESNKLTKEDRGMYEDMIKDPNAKKVKTGLRQLIRKLA 255 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + ++ + QA + I K ++ GDFN + + + +D F Sbjct: 256 EASAIRASQADSVAKAIAACKYPTT--IVCGDFNDG-SISYTHRILTQKLDD-----AFT 307 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + ID ++ N + + R + SDH PI Sbjct: 308 QSGKGLGISYNQNKFYFRIDNILISPNLKAY-------------NCTVDRSIKASDHYPI 354 Query: 299 SIDYD 303 Sbjct: 355 WCYIS 359 >gi|116051998|ref|YP_789159.1| hypothetical protein PA14_12670 [Pseudomonas aeruginosa UCBPP-PA14] gi|254242644|ref|ZP_04935966.1| hypothetical protein PA2G_03405 [Pseudomonas aeruginosa 2192] gi|296387516|ref|ZP_06876991.1| hypothetical protein PaerPAb_05157 [Pseudomonas aeruginosa PAb1] gi|115587219|gb|ABJ13234.1| possible nuclease or phosphatase [Pseudomonas aeruginosa UCBPP-PA14] gi|126196022|gb|EAZ60085.1| hypothetical protein PA2G_03405 [Pseudomonas aeruginosa 2192] Length = 379 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 33/328 (10%), Positives = 93/328 (28%), Gaps = 68/328 (20%) Query: 21 AQKVRLVSWNINTLSEQ-----EGVSLWKNSVKRTTSD-----YTLLRQYAKNLDADIVF 70 Q +++++WNI L+ + + + +R T++ + + ++ D+V Sbjct: 70 GQALKVMTWNIQYLAGKRYVFWDDLPDATGPDQRPTAEDLAFTLDEVVRVIRDEQPDLVL 129 Query: 71 LQEMGSYNAVAK-------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 LQE+ ++ + + + + A R Sbjct: 130 LQEIDDGSSATDDQDQLALIQERINDLYHCSAQAYEWKSAFVPTPHIFGSVGRKQATLSR 189 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLEN 175 + ++ P G R A+ + G ++ VL+ + + Sbjct: 190 YRIDSAERRQLPPRDGGLFDRLFGPRPAILVSHLPIDGGGELAVLN----------ARFD 239 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND------------- 222 + L +Q + + + + + P+++ GD N Sbjct: 240 RPQANDDTLERQVETTRTLLDELQARRTPWLLGGDLNLLPPGQYPYLLAPLRAPYREDSE 299 Query: 223 --------DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 +++ + + + +DY + Sbjct: 300 LAVLSGRFPMVPSLEEASGVDQVRWYTHFPNDPRV-QGPDRTLDYLFHSPSL-------- 350 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +S ++S+H P++ + Sbjct: 351 ---TRLDARVRRSDTLQISNHLPLAARF 375 >gi|171912039|ref|ZP_02927509.1| hypothetical protein VspiD_12705 [Verrucomicrobium spinosum DSM 4136] Length = 339 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 42/332 (12%), Positives = 100/332 (30%), Gaps = 45/332 (13%) Query: 1 MIR-----KYVLALVFFLVPCTASVA-------------QKVRLVS---WNINTLSEQEG 39 M R ++ LA + + T ++ ++ R+V+ +N+ + Sbjct: 1 MKRFLFGSQWFLASAWLWLFATTTLPVYSQAESTSAGFDERNRIVTFCAYNLRNYLKMPR 60 Query: 40 --VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER 97 + + + L + + DI+ + E+G +A + + Sbjct: 61 SVDGAIQEKALKPDKEIAPLIEILATIKPDILGVCEIGDAEDLADL-----QARLKVRDI 115 Query: 98 LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR-AGNRRAVELLVEI-NGK 155 + HS+ + D +A+ + + S L R ++ V + Sbjct: 116 DLPHSEMGNGGDPTRRLALLSRFPITSRNSQSELKYHIGDVILPMQRGILDATVALRPNF 175 Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNR 213 ++ L +H KS + ++ + +A L+ I E + GDFN Sbjct: 176 EVRFLGVHFKSQREVPGMDQKL-----MRRNEAHLLRRHIESILTTEPATRLLAYGDFNE 230 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--RNKIPIDYFVMDQNAYKFLI 271 + + + ++ + + +DY +++ + Sbjct: 231 SKHEAALVEIEGVPGTDVSMMDVRLRDSRGETWTHFWDAADHYSRLDYCFVNRALQSDIK 290 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + SDH P+ I D Sbjct: 291 ------KPESFVYDPPNFYDASDHRPLVIKID 316 >gi|189520528|ref|XP_001338369.2| PREDICTED: sphingomyelin phosphodiesterase 2-like [Danio rerio] Length = 436 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 88/307 (28%), Gaps = 46/307 (14%) Query: 17 TASVAQKVRLVSWN---INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 T S K R++S N I LS K+ + L+ + + D+ LQE Sbjct: 2 TTSEPIKFRVLSLNCWGIQYLS------------KKRQERFVLIGELLNQEELDVALLQE 49 Query: 74 MGSYNAV----AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 + K+ ++ + + S + IH A R Sbjct: 50 VWCEKDFLYLKKKLSTVYPHSHYFKSGFFGSGLAVFSRHQIHDAFLYRYSL-------NG 102 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 G + ++L+ I+G K+ V HL + S QA Sbjct: 103 YPYMAQHGDWFGGKAVGKVLLNISGLKVHVFVTHLHA-----EYCREKDSYLSHRVVQAW 157 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L+ +I ++ GD N + LG T + + + Sbjct: 158 ELQQFIRHTSAGADVVILGGDLNMHPDDLGTRLLRNYTGLQDSFTEAATFDGCEGGLTHI 217 Query: 250 N------------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + I IDY + + + ES S SDH Sbjct: 218 SENPFTLADGLAPFGGGIRIDYIMFKGSGEVDVSCESLSTTKGPVPGQP---FPYSDHEA 274 Query: 298 ISIDYDF 304 ++ + F Sbjct: 275 LTAQFLF 281 >gi|33597251|ref|NP_884894.1| hypothetical protein BPP2674 [Bordetella parapertussis 12822] gi|33573678|emb|CAE37967.1| conserved hypothetical protein [Bordetella parapertussis] Length = 252 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 38/292 (13%), Positives = 81/292 (27%), Gaps = 48/292 (16%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--- 74 ++R+++ N + LR+ + D+V LQE+ Sbjct: 2 PPEPIRLRILTVNAHKGFTSFNRRF----------ILHELREALREARPDLVLLQEVLGE 51 Query: 75 -GSYNAVAKVFPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + A +P + F + ++ D H AV K V ++ L Sbjct: 52 HQRHAARHARWPAVSQYEFLADTLWSAYAYGRNAVYPDGHHGNAVLSKYPIVSHRNEDLS 111 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 R + ++++ + + + + +Q + L Sbjct: 112 VGA----AHEPRGMLHCVLDVRDAPAPLHALCVHLGLR-----------EAHRQEQLRRL 156 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 ++ Q + ++AGDFN T+ Sbjct: 157 CQYLRQHVPAQAAALLAGDFNDWRQRAD------ATLARCGLADVHRLALGHAARTFPAA 210 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +D + A + S + RLSDH P++ + Sbjct: 211 CPLLRLDRIYVRNVAGSEPRRLS-----------RRPWSRLSDHVPLAAEVT 251 >gi|322696797|gb|EFY88584.1| DNA lyase [Metarhizium acridum CQMa 102] Length = 634 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 48/340 (14%), Positives = 86/340 (25%), Gaps = 83/340 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 R+ +WN+N + G W R + + ++ DIV +QE + + Sbjct: 3 FRITTWNVNGIRNPFGYQPW-----REQRTFQAMFDILES---DIVVMQETKIQRKDLQD 54 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN------------VRVLQQSYP 129 + W +F+S L H K S I+T A + + Sbjct: 55 DMVLVPGWDVFFS---LPKHKKGYSGVAIYTRNASCAPIRAEEGITGVLCPPKSTTKFRD 111 Query: 130 LLGAKDSFSRAGN---RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 L + VE V + + +L+ + N + Sbjct: 112 LPSDQQIGGYPRPGQLSGIVEDTVLDSEGRCVILEFPAFVLLGVYCPANRDESRVEFRTS 171 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFN----------------------RKINYLGNNDDF 224 + L I ++AGD N + L F Sbjct: 172 FFEALAARIRNLVAEGKEVILAGDLNVIRSEMDSTNVMENLRKENMTIDEWISLPTRRIF 231 Query: 225 WKTIDPNDSLIRFPKEKDSR------------------CNANKNLRNK----IPIDYFVM 262 + I + + +++ C K IDY + Sbjct: 232 NQLIFEGSIVGDRDEGRETPVLWDLCRCFHPSRLGMNTCWDTKKNTRPANNGSRIDYILC 291 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + G SDHCP+ Sbjct: 292 SNGIKDWFTSANIQ-----------EGLMGSDHCPVFATI 320 >gi|293605431|ref|ZP_06687813.1| endonuclease/exonuclease/phosphatase [Achromobacter piechaudii ATCC 43553] gi|292816159|gb|EFF75258.1| endonuclease/exonuclease/phosphatase [Achromobacter piechaudii ATCC 43553] Length = 255 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 84/287 (29%), Gaps = 53/287 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--- 80 + +++ N + LR+ + D+VFLQE+ + V Sbjct: 12 LTVLTVNTHKGFTSFNRRFM----------LHDLREALRLAAPDVVFLQEVLGEHQVHAE 61 Query: 81 --AKVFPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P + F + +++ H A+ + +++ + Sbjct: 62 RHQEAWPALSQYEFLADTLWSDYAYGRNAVYPAGHHGNAILSRYPIERYENHDVSVDGH- 120 Query: 137 FSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R + ++ + G + + +HL +Q Q L + + Sbjct: 121 ----EGRGLLHCVLRMPGDAPVHAICVHLGLL-------------ERHRGEQLQRLCELV 163 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 ++ + P +IAGDFN + + + F + Sbjct: 164 AREVPADEPLLIAGDFNDWRLNAD------RLMAGCGTQEVFTTRLGRPARTFPARWPLL 217 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + + + RLSDH P+S + Sbjct: 218 RLDRIYVRSVRDWRPVPLASRV-----------WSRLSDHVPLSAEI 253 >gi|294083994|ref|YP_003550751.1| exodeoxyribonuclease III [Candidatus Puniceispirillum marinum IMCC1322] gi|292663566|gb|ADE38667.1| exodeoxyribonuclease III [Candidatus Puniceispirillum marinum IMCC1322] Length = 256 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 39/302 (12%), Positives = 81/302 (26%), Gaps = 71/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ SWN+N + + + K +ADI+ +QE+ S + Sbjct: 1 MRIASWNVN----------------SAKARLDHITGWLKADNADILMMQEIKSQDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + + D +R Sbjct: 41 ------NFPHDAFTDLGWHIAVHGQKSYNGVAIASRFPIDDVMNGLPGDDADEQARY--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + + +I+L + + Y S L D + + + Sbjct: 92 ------IEATINGVRIGNIYLPNGNPAPGPKFDYKLS------WMARLYDRAVELLATEM 139 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANK 249 P V+ GD+N + D + +D + + Sbjct: 140 PVVLGGDYNVLPQDVDCYDPAAWVGDALTHDDSRAAFFKILHAGYMDALRALHPSGVHYT 199 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A L D ++ SDH PI Sbjct: 200 YWDYQAGAWQRDNGLRIDHLLLSPEAGDRLTDVGI-------DRAPRGLEKPSDHTPIWC 252 Query: 301 DY 302 Sbjct: 253 QL 254 >gi|302895743|ref|XP_003046752.1| hypothetical protein NECHADRAFT_66713 [Nectria haematococca mpVI 77-13-4] gi|256727679|gb|EEU41039.1| hypothetical protein NECHADRAFT_66713 [Nectria haematococca mpVI 77-13-4] Length = 602 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 40/329 (12%), Positives = 92/329 (27%), Gaps = 62/329 (18%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + + + + + +N L+ + + D++FLQ Sbjct: 284 VSFTSKGSCKGISVADYNTENLNP---------QSTHLPLVIEQIVNKLRT--PDLIFLQ 332 Query: 73 EMGSYNA------------VAKVFPKNTW-----CIFYSTERLINHSKRDSNNDIHTAIA 115 E+ + +A + + + + N +I TA Sbjct: 333 EVQDNSGATNDGVVSANLTLAALADGIEASSGIEYAWTEVDPVNNKDGGQPGGNIRTAYL 392 Query: 116 VRKKNVRVLQ------------------QSYPLLGAKDSFSRAGNRRAVELL---VEING 154 R + +++ + P + + +R+ + + V+ Sbjct: 393 YRPDVIELVKPSAGASDAANEVLDGPSLKYNPGRIDPANAAWDDSRKPLVAMWKPVKGTK 452 Query: 155 KKIWVLDIHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLV--PFVIA 208 K + +++H S S+ +QQAQ D+I Q + + A Sbjct: 453 KPFFTVNVHFGSKGGSTSIHGDPRSPVNKGVEKRTQQAQVTADFIAQILKKDRKAHIIAA 512 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 GDFN + L K ++ N +D+ + + Sbjct: 513 GDFNEFTQVAPIR--TFVEESGLVDLDDAAKVPETERYTYLFDSNCQALDHMFISKELR- 569 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + + + +SDH P Sbjct: 570 ----YGVKYEHLHINTWQDKAGEVSDHDP 594 >gi|329946194|ref|ZP_08293807.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 170 str. F0386] gi|328527792|gb|EGF54783.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 170 str. F0386] Length = 269 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 85/309 (27%), Gaps = 69/309 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N + + + + D D + +QE+ Sbjct: 1 MRLATWNVN----------------SIRTRVDRVLAFLEREDVDALAMQEIKCRPD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ + + + G +++ Sbjct: 41 ------QFPVEPFEAAGYRLAIHGLNQWNGVAIASRVG-LDDVATSFPGQPGWAAKSEAE 93 Query: 144 RAVELLVE-------INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 VE + + + +++ + L TY + L+D + Sbjct: 94 PVVEARALGATVGAASEARPVRLWSLYVPNGRELTHPHYTYKLD------WLRALRDDVA 147 Query: 197 QK--KESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFP 238 E +P + GD+N + F + + Sbjct: 148 TWLRAEPDLPLALVGDWNVAPKDEDVWDMSVFEGATHVSAPEREAFAAFAETGMHEVTRE 207 Query: 239 KEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + + + LR + ID+ Q + + D + +GK SD Sbjct: 208 RVTNYTYWDYQKLRFPRNEGMRIDFVYASQALADRVTGAAI-------DRNERKGKGASD 260 Query: 295 HCPISIDYD 303 H P+ ++ D Sbjct: 261 HVPVIVEVD 269 >gi|312882308|ref|ZP_07742052.1| hypothetical protein VIBC2010_09642 [Vibrio caribbenthicus ATCC BAA-2122] gi|309370021|gb|EFP97529.1| hypothetical protein VIBC2010_09642 [Vibrio caribbenthicus ATCC BAA-2122] Length = 456 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 36/300 (12%), Positives = 90/300 (30%), Gaps = 34/300 (11%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 VP + + + ++N+ + + ++ + D++ LQE Sbjct: 176 VPMPEERSNAISVGTYNLWMIPAVSSDITERANLMEHSL-----------SGYDVLALQE 224 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + +F + + DS + + + + Sbjct: 225 AFA-SDRDALFDSLSREY----PYKTDVVGGDSMAMYDGGVVTLSRYPILETDAIIFNHC 279 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + A + V ++ NG+ + + HL SF ++ L + Sbjct: 280 SGTDCHAD-KGIVYTKIDKNGQIYNIFNTHLASFSTPEAKRLRRLQLGLLRTF------- 331 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 +T++ S + AGDFN N D + +++ + N Sbjct: 332 MLTKQIPSNEVVIFAGDFNIDKNSDFLEYLLMLATLEVDP-PAYDGHREATFDPTINRYA 390 Query: 254 K---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +DY ++ + + ++ LSDH ++ +++F Sbjct: 391 RANYSGGETVEYLDYVLVSSEHLRARKNINTVQLKQRVSYATWDDWHLSDHFAVNGEFEF 450 >gi|148223007|ref|NP_001081376.1| DNase I [Xenopus laevis] gi|6683039|dbj|BAA89002.1| DNase I [Xenopus laevis] Length = 350 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 90/301 (29%), Gaps = 29/301 (9%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 ++ + C ++ S+NI S LL + + Sbjct: 3 FLVLVPMTACFLQAGFAFKIASFNIQRFSMT---------KVDDPVVLELLMRILSRYE- 52 Query: 67 DIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 I+ ++E+ A+ + + + + LI+ S+ A R+ V+ Sbjct: 53 -IIAIEEVMNADNTAIISLVKELSLATKLNYNVLISDHLGRSSYREKYAYVYREDIVKPT 111 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + + G ++ + + R + + S + +L Sbjct: 112 EWYHFDDGCENCGTDSFIREPFVARFT----SLTTVVKDFALISIHTSPDYAIMEVDALY 167 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + + +I GD+N +Y+ + + + L+ +K+ Sbjct: 168 DAWVDAKQRL------KMENILILGDYNAACSYVASRHWPIIRLRHVEELVWLIGDKEDT 221 Query: 245 CNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISID 301 + D V + ++ ++ Y+ + K +SDH P+ ++ Sbjct: 222 TVSTNTN---CAYDRMVAGGEELQRGIVPDTAKAFNYHVAYDLTYEMAKAVSDHYPVEVE 278 Query: 302 Y 302 Sbjct: 279 L 279 >gi|258573831|ref|XP_002541097.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237901363|gb|EEP75764.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 687 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 36/367 (9%), Positives = 89/367 (24%), Gaps = 81/367 (22%) Query: 15 PCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + K + ++N + + + + LL + +ADIV LQ Sbjct: 303 SANGASDNKFTVFTYNTLCDKYATNQQYGYVPSKALAWEFRQDLLLNEIRGHNADIVCLQ 362 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLIN-----HSKRDSNNDIHTAIAVRKKNVRVLQQS 127 E+ + + + + + D K + + + Sbjct: 363 EIDQKSFHGYFREQLAYNDYKGVYWPKGRAQGMPEEEAKYVDGCATFFKGSKYILLEKSM 422 Query: 128 YPLL----------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSL 173 G D ++R + + ++V + G++ V+++H+ + Sbjct: 423 IHFGQTAVRRPDAKGQDDIYNRLWQKDNIAVVVFLENRLTGERFIVVNVHIHW---DPAY 479 Query: 174 ENTYSPSCSLLSQQAQWLKD------------------------------------WITQ 197 ++ +++ ++ L + + Sbjct: 480 KDVKLIQVAIMMEEVTKLAEQYTKIPPCADKTAFRFSEPEDGKENQEASTPVEPAPSVEY 539 Query: 198 KKESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 S +P ++ GDFN + + F + Sbjct: 540 TSASQIPILVCGDFNSCPGSAVYNLLAHGRLAEEHPDLEKRLYGNLSRMGMTHPFTLKSA 599 Query: 243 SR-----CNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 N IDY N + + SDH Sbjct: 600 YGAVGELAFTNYTPEYIDVIDYIWYSSNCLQVTALLGEVEKEYLKRVPGFPNYHFPSDHI 659 Query: 297 PISIDYD 303 + ++ Sbjct: 660 ALMAEFS 666 >gi|158298437|ref|XP_318609.4| AGAP009587-PA [Anopheles gambiae str. PEST] gi|157013880|gb|EAA14571.4| AGAP009587-PA [Anopheles gambiae str. PEST] Length = 606 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 75/301 (24%), Gaps = 76/301 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ SWN+ L G ++ ++ DI+ +QE Sbjct: 354 FKISSWNVAGLRSWVGKGG---------------LEFIEHEKPDILCVQETKCTED---- 394 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + H H +A+ K + + G D R Sbjct: 395 -----QMPDEARHIKGYHPYWLCKPGGHAGVAIYSKKMPF----HVAYGLGDEEQDQDGR 445 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +K +++ +++ + Q + L ++ Sbjct: 446 L-----LTAEYEKFYLVCVYVPNAGRKLVTLPKRLRWNEKFHQYLRDL--------DAKK 492 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + F K R A Sbjct: 493 PVILCGDMNVAHEEIDLANPKTNKKNAGFTPEEREGMTELLSYGFVDTFRKLYPDRTGAY 552 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 +DYF+ + + ++ SDHCP++ Sbjct: 553 TFWTYMGGARAKNVGWRLDYFITSERLAGKVTDNVIRSQVF-----------GSDHCPVT 601 Query: 300 I 300 + Sbjct: 602 L 602 >gi|15599153|ref|NP_252647.1| hypothetical protein PA3958 [Pseudomonas aeruginosa PAO1] gi|107103475|ref|ZP_01367393.1| hypothetical protein PaerPA_01004545 [Pseudomonas aeruginosa PACS2] gi|218889759|ref|YP_002438623.1| putative nuclease or phosphatase [Pseudomonas aeruginosa LESB58] gi|9950146|gb|AAG07345.1|AE004813_12 hypothetical protein PA3958 [Pseudomonas aeruginosa PAO1] gi|218769982|emb|CAW25744.1| possible nuclease or phosphatase [Pseudomonas aeruginosa LESB58] Length = 379 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 33/328 (10%), Positives = 93/328 (28%), Gaps = 68/328 (20%) Query: 21 AQKVRLVSWNINTLSEQ-----EGVSLWKNSVKRTTSD-----YTLLRQYAKNLDADIVF 70 Q +++++WNI L+ + + + +R T++ + + ++ D+V Sbjct: 70 GQALKVMTWNIQYLAGKRYVFWDDLPDATGPDQRPTAEDLAFTLDEVVRVIRDEQPDLVL 129 Query: 71 LQEMGSYNAVAK-------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 LQE+ ++ + + + + A R Sbjct: 130 LQEIDDGSSATDDQDQLALIQERINDLYHCSAQAYEWKSAFVPTPHIFGSVGRKQATLSR 189 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLEN 175 + ++ P G R A+ + G ++ VL+ + + Sbjct: 190 YRIDSAERRQLPPRDGGLFDRLFGPRPAILVSHLPIDGGGELAVLN----------ARFD 239 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND------------- 222 + L +Q + + + + + P+++ GD N Sbjct: 240 RPQANDDTLERQVETTRTLLDELQARRTPWLLGGDLNLLPPGQYPYLLAPLRAPYREDSE 299 Query: 223 --------DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 +++ + + + +DY + Sbjct: 300 LAILSGRFPMVPSLEEASGVDQVRWYTHFPNDPRV-QGPDRTLDYLFHSPSL-------- 350 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +S ++S+H P++ + Sbjct: 351 ---TRLDARVRRSDTLQISNHLPLAARF 375 >gi|327485101|gb|AEA79508.1| Extracellular deoxyribonuclease Xds [Vibrio cholerae LMA3894-4] Length = 869 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 44/373 (11%), Positives = 91/373 (24%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R ++ + LDADIV L E Sbjct: 473 GDLRIATFNVLNYFNSPFGGDDNQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116 + + S R D I T + Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGKKIWVLDIHL 164 R K V++ Q + ++ + R + ++ G + Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652 Query: 165 KSFCFLDSLENT---------------YSPSCSLLSQQAQ-WLKDWITQKKESL------ 202 + Y +C A L D + + Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDPDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712 Query: 203 ------VPFVIAGDF-------------NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 P ++ D+ N I + D I + + K Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDSGAEIKHSYGYLNAVAMKHP 772 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290 + +D+ ++ + ++ + I E + Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 833 RASDHDPAVLELN 845 >gi|298483187|ref|ZP_07001367.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D22] gi|298270704|gb|EFI12285.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D22] Length = 305 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 32/288 (11%), Positives = 81/288 (28%), Gaps = 37/288 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++++S+NI + ++ K + ++ +QE Sbjct: 48 NQIKVMSFNIRYYNTKDTG------EKSWEARTAAFIPMIGEHKPTVIGMQEARPPQLKW 101 Query: 82 KVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + R N + K P + + Sbjct: 102 LEENWKDYGYVGKGRRANNANNDEFVPIFYRKKAVELIKWDCFWLSETPDVPGSQGWDST 161 Query: 141 GNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R A + + +GKK + ++ H+ + ++ + + + +++ Sbjct: 162 VPRIATWAIFKHIASGKKFFFINTHIDVGSTIAPGKS------------MEVIVNKMSEL 209 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 +P ++ DFN++I+ + + K S +D Sbjct: 210 NPEGLPMLLTADFNKQIDS-DIFNGVKTFMTNVRLSAPITDSKYSYTGFGTANPY--IVD 266 Query: 259 YFVMD--QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + I + + I Y +SDH PI ++ Sbjct: 267 HIFCTGFKALKFETIDKVYQNITY-----------ISDHYPIIGKLEY 303 >gi|196000877|ref|XP_002110306.1| hypothetical protein TRIADDRAFT_21945 [Trichoplax adhaerens] gi|190586257|gb|EDV26310.1| hypothetical protein TRIADDRAFT_21945 [Trichoplax adhaerens] Length = 473 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 37/321 (11%), Positives = 87/321 (27%), Gaps = 34/321 (10%) Query: 17 TASVAQKVRLVSWNINTLSEQEG------VSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 TA+ +++R VS+NI S + LL + + +AD++ Sbjct: 147 TATTNKEIRTVSYNILGESYVGSKYAKRIYRNCPDYALDINYRQQLLMRELTSYNADLIC 206 Query: 71 LQEMGSYNAVAKV---FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 LQE+ ++ + + + N+ + + ++ + Sbjct: 207 LQEVSHETFNNRLKYGLQFQGFQGLWKSRVFDNNDGLAIFYKTSKFDLISQHDLDLNASI 266 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD-----IHLKSFCFLDSLENTYSPSCS 182 + + + V + V + + C ++ + Sbjct: 267 QKDSYQEALLNLIRPYDQLVHEVLSRSNVLQVALLRRKECNDQLICLANTHLYFRPLAEI 326 Query: 183 LLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGN---------------NDDFW 225 + Q Q + + ++ + S +P ++ GDFN + Sbjct: 327 IRLIQIQAITNHLSLISKSISDLPVILCGDFNSAPSSDTYQFLTNGYCKSQSTADESYLL 386 Query: 226 KTIDPNDSLIRFPKEKDSRCN--ANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNE 282 K + + S+ + IDY + N Sbjct: 387 KDAASFEFSHNLTFDALSQTLHCTHHTTNFSGTIDYIFGKRGYFNVKNAIPLLEVTNINA 446 Query: 283 DDIKSRGKRLSDHCPISIDYD 303 + + SDH + D Sbjct: 447 NHGLPTTEFPSDHLAVICDIS 467 >gi|331085596|ref|ZP_08334680.1| exodeoxyribonuclease [Lachnospiraceae bacterium 9_1_43BFAA] gi|330407483|gb|EGG86985.1| exodeoxyribonuclease [Lachnospiraceae bacterium 9_1_43BFAA] Length = 250 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 76/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N + + K DADI +QE Sbjct: 1 MKFISWNVNGIRACVQKGF---------------LDFFKEADADIFCIQESKMQEG-QLK 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + F++ + ++ A+ K + G R Sbjct: 45 LELEGYHQFWN----------YAERKGYSGTAIFTKQEPLSV----AYGIGMEEHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++ + + ++ + + + + + + L+ Sbjct: 91 -----VITLEFEEFYFVTVYTPNSQNELARLDYRMQWETEFLKYLKKLEA--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + F + Sbjct: 138 PVIFCGDLNVAHREIDLKNPKTNQKNAGFTDEERGKFTELLSAGFIDTFRYFYPEQEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + L SDHCP+ Sbjct: 198 SWWSYRFSARAKNAGWRIDYFCVSECLKDRLRDAKILT-----------DVMGSDHCPVE 246 Query: 300 IDYD 303 +D++ Sbjct: 247 LDFE 250 >gi|37993828|gb|AAR06994.1| sphingomyelinase [Bacillus cereus] Length = 252 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 82/229 (35%), Gaps = 26/229 (11%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 30 STNQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVFD 83 Query: 77 YNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 + ++ T E S+ +A+ K V + Sbjct: 84 NSTSNRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKIQ 143 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Q Sbjct: 144 Y-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGNTSPA-SVRTNQ 198 Query: 188 AQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230 + ++D+I + + + GD N N +KT+ Sbjct: 199 LKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYTSMFKTLHA 247 >gi|78189393|ref|YP_379731.1| hypothetical protein Cag_1431 [Chlorobium chlorochromatii CaD3] gi|78171592|gb|ABB28688.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3] Length = 331 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 40/324 (12%), Positives = 86/324 (26%), Gaps = 55/324 (16%) Query: 21 AQKVRLVSWNINTLSEQEGVS-------LWKNSVKRTTSDY----TLLRQYAKNLD---- 65 QK+ ++ WN+ L + + ++ + +R L Sbjct: 20 PQKIGILWWNVENLFDTQDDPAKRDEDFTPNGKLQWSEKKLYLKQMRIRDLLGALAADKQ 79 Query: 66 ----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 DI+ E+ + + + + I A+A + Sbjct: 80 MGSLPDIIGFAEVENKTVFEQTLQG-----VKTGSYKSVYYNSRDPRGIDVALAYNSATL 134 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 ++ + K R V + + +L H S F L + Sbjct: 135 KLQHSKAYSVPLKH-----PTRPVVVASFMVGRHPLHLLLNHWPSRAFDAELSEPNRIAA 189 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID------PNDSLI 235 + + A+ + D + V+ GD N + + ++D L+ Sbjct: 190 ATI---ARHIVDSLLT-ANPKADVVVMGDMNDEATNRSLANTLGSSMDGVQVKAAKGKLL 245 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF----LIQESFSEILYNEDDIKSRGKR 291 + + ID+ ++ + +E+F I Y S Sbjct: 246 YNCWSGYNGIGSYYYRSKWQKIDHMLLTHGMLDRTGFYVTKEAFRCIDYPALLKSSGKGT 305 Query: 292 LS------------DHCPISIDYD 303 S DH P+ + Sbjct: 306 WSTYEKRVYKGGYADHLPLYLKVS 329 >gi|86131717|ref|ZP_01050314.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia donghaensis MED134] gi|85817539|gb|EAQ38713.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia donghaensis MED134] Length = 343 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 84/306 (27%), Gaps = 56/306 (18%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 ++ +L+ F + L+++N+ + V+ + + ++ Sbjct: 81 HIFSLIRFGGGSDTKQVDTLTLLTYNVRQFN-------VYGWVEEANVGKRAIA-FIEDQ 132 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 + DIV LQE ++ K + + K V Sbjct: 133 NPDIVCLQE-------------YHPDFELDAKKYPFKHKVMRPANSKFGQVIFSKFPIVH 179 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 S + +++ I ++H +SF SL N + L Sbjct: 180 SGSLDFG--------KKGNNGIYADIKVGEDTIRAYNMHFQSFRLSPSLNNLQKENSKKL 231 Query: 185 --------SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 +Q +K ++ + S ++AGDFN D + Sbjct: 232 LGRLGVAFEKQEGQVKKFLQSEAASPHKVIVAGDFNNSATSYMYRKV------RGDKVDA 285 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 F K + ID+ + D+ D LSDH Sbjct: 286 FAKAGSGTGATFWFDIIPLRIDFILADEQLEVL-------------DFETYGDIDLSDHK 332 Query: 297 PISIDY 302 P + Sbjct: 333 PSMATF 338 >gi|170755597|ref|YP_001781409.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum B1 str. Okra] gi|169120809|gb|ACA44645.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum B1 str. Okra] Length = 352 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 101/311 (32%), Gaps = 44/311 (14%) Query: 22 QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +V++NI G +S ++T + + + K ++ +FLQE Sbjct: 53 DSFSIVTFNIGYGGMDDKQDFFMDGGKGSRSSSKEKTMENMRRITSFLKKDNSSFIFLQE 112 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV------LQQS 127 + + + + F + + ++ + + S + + + K + V L + Sbjct: 113 VDTNS--TRSFRIDQYDYLKNSLKAYSSSMALNYKTPWVPVPILKPHGTVNAGLVNLSKY 170 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 + + + ++ + V + + ++S + Y + QQ Sbjct: 171 KINSATRYQYPGKESWPRQLAELDRCFLESRVSLENNRELVLINSHLSAYDKGGKIRKQQ 230 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---------NDDFWKTIDP--NDSLIR 236 +LK++I ++ + ++ GD+N I D K + + Sbjct: 231 LSFLKNYIIKEYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKW 290 Query: 237 FPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID F++ N ++ Y+ + + Sbjct: 291 IADKNVPTTRTDATPYKKGENFTAVIDGFLVSDNIEATSVKA------YSMEFKNT---- 340 Query: 292 LSDHCPISIDY 302 DH P+ +++ Sbjct: 341 --DHNPVKMEF 349 >gi|91775775|ref|YP_545531.1| endonuclease/exonuclease/phosphatase [Methylobacillus flagellatus KT] gi|91709762|gb|ABE49690.1| Endonuclease/exonuclease/phosphatase [Methylobacillus flagellatus KT] Length = 235 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 39/284 (13%), Positives = 80/284 (28%), Gaps = 51/284 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 QK+RL+ +NI+ +G D + + + LD DI QEM + + Sbjct: 2 QKIRLLCFNIHGGRSLDG-----------KRDLSRVHGLMQRLDIDIGVFQEMETRPS-R 49 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + + + L ++ Sbjct: 50 GGASNDVQTLAGPERPHHLICPSMEEGAGWYGNLIVSRYPIIRGLRHNL----ETHPSLE 105 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R A + LV++ ++ V+ HL F +A+ L + +E Sbjct: 106 PRYAADALVQLPWGRLRVIGTHLSLSVF-------------ERRSEAENLLRLMQAVEEE 152 Query: 202 LV-PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 P ++ GD N + F + +D Sbjct: 153 ERSPILLMGDINEWQVPSPLLRYLNR---------CFTPLPCKPTFPSLCPVF--RLDRV 201 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D + ++LSDH P+ ++ ++ Sbjct: 202 WHD--------APGIRVTAHRLP--GKGIRKLSDHLPLVVELEY 235 >gi|28973671|gb|AAO64154.1| unknown protein [Arabidopsis thaliana] gi|29824267|gb|AAP04094.1| unknown protein [Arabidopsis thaliana] gi|110737063|dbj|BAF00485.1| hypothetical protein [Arabidopsis thaliana] Length = 321 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 39/297 (13%), Positives = 77/297 (25%), Gaps = 44/297 (14%) Query: 49 RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108 R + + KNL AD LQE+ Y++ + + +R + Sbjct: 23 RWKARSHAILSVLKNLQADFFCLQEVDEYDSFYRNNMDSLGYSGIYIQRTGQRKRDGCAI 82 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR------------------------ 144 + A R+ DS S + + Sbjct: 83 FYKPSCAELVTKERIEYNDLVDSIKADSVSCSEQKIETSNEGKDSRKDSRDLNDPLVRLK 142 Query: 145 ----AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + IN ++ + + L + L + K I+ + E Sbjct: 143 RDCVGIMAAFRINKPFQHIVIVANTHLYWDPELADVKLAQAKYLLSRLAQFKTLISDEFE 202 Query: 201 SLVPFVIAGDFNRKINY----------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 ++AGDFN + + P + + N Sbjct: 203 CTPSLLLAGDFNSIPGDMVYSYLVSGNAKPTETIEEEEAPVPLSSVYEVTRGEPKFTNCT 262 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILY----NEDDIKSRGKRLSDHCPISIDYD 303 +DY + + F+ S ++ + SDH PI +++ Sbjct: 263 PGFTNTLDYIFISPS--DFIKPVSILQLPEPDSPDVVGFLPNHHHPSDHLPIGAEFE 317 >gi|317496610|ref|ZP_07954957.1| exodeoxyribonuclease III [Gemella moribillum M424] gi|316913275|gb|EFV34774.1| exodeoxyribonuclease III [Gemella moribillum M424] Length = 254 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 80/304 (26%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +S+N+N L + ++ K LDAD LQE Sbjct: 1 MKCISFNVNGLRAIVNKNFEED---------------FKKLDADFFCLQETKMQEG-QLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ + ++ A+ K+ + + D+ R Sbjct: 45 LQFDGYYSYFN----------YAERKGYSGTAIYTKHKPLNVNYGIGIDEHDTEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + K + + ++ + + L Sbjct: 91 -----VITLEYDKFFFITVYTPNSGSELKRLDYRMTWEEDFKNYLLELNK--------TK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GD N + + + + F A Sbjct: 138 GVVVCGDLNVAHTEIDLKNPKSNTKNAGFTPEEREKFTKLLDAGFIDTFRYFNPELTGAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ ++ K+L+ + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFLTSRDLEKYLVSAKIHNDIL-----------GSDHCPVE 246 Query: 300 IDYD 303 + + Sbjct: 247 VVLN 250 >gi|307297053|ref|ZP_07576869.1| exodeoxyribonuclease III Xth [Sphingobium chlorophenolicum L-1] gi|306877579|gb|EFN08807.1| exodeoxyribonuclease III Xth [Sphingobium chlorophenolicum L-1] Length = 265 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 88/311 (28%), Gaps = 74/311 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +Q + + SWNIN + ++ ++ DI+ LQE V Sbjct: 2 SQTLSIASWNIN----------------SVRARLDIVERFLTEEAPDILCLQE---TKVV 42 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++FP + +++N +H +A+ + ++ Sbjct: 43 NEIFPTAMFRQLGYVHQVLN------GQRMHHGVAIMSRVPIHEDDRLDWQANGEARH-- 94 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 V + ++ + + ++++ + + Q+ +L+ I Sbjct: 95 -----VGVRLDNG---VRIENVYVPAG-----GDIADREVNPKFGQKLDFLERMIQWSSG 141 Query: 201 -SLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 P ++ GDFN + + + ND + + Sbjct: 142 LEDKPTILTGDFNIAPMECDVWSHKQLLNVVSHTPIECEILARLQASNDWVDIGRHFYPA 201 Query: 244 RCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + +D+ M ++ I + + S Sbjct: 202 PQRLYTWWSYRAKDWAESDRGRRLDHMWMTRDVAGKAISHRVV-------EPARNWGKPS 254 Query: 294 DHCPISIDYDF 304 DH PI ++ F Sbjct: 255 DHIPIITEFAF 265 >gi|157146576|ref|YP_001453895.1| hypothetical protein CKO_02337 [Citrobacter koseri ATCC BAA-895] gi|157083781|gb|ABV13459.1| hypothetical protein CKO_02337 [Citrobacter koseri ATCC BAA-895] Length = 253 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 76/288 (26%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ N + LR + + ADIV LQE+ + V Sbjct: 9 SFKVLTINTHKGFTAFNKRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P T F + + + + + H AV + S Sbjct: 59 LHVENWPDTTHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113 Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R + + + I V+ +HL Q L +W Sbjct: 114 VGGSEKRGVLYCRIVPPMLAQPIHVMCVHLGLREG-------------HRQAQLDMLVEW 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + P V+AGDFN ++ F + Sbjct: 161 VNA-LPESEPVVVAGDFNDWRQKANYPLKASAGLEE-----IFTRAHGRPARTFPVRLPI 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + LSDH P+S + Sbjct: 215 LRLDRIYVKNANASSPAALP-----------LRNWRHLSDHAPLSAEI 251 >gi|229817407|ref|ZP_04447689.1| hypothetical protein BIFANG_02669 [Bifidobacterium angulatum DSM 20098] gi|229785196|gb|EEP21310.1| hypothetical protein BIFANG_02669 [Bifidobacterium angulatum DSM 20098] Length = 297 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 31/323 (9%), Positives = 84/323 (26%), Gaps = 57/323 (17%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 F VA + + + N+N + + + +A ++ + Sbjct: 2 FSRIAVTLVAMSITITTSNVNGIRA---------------AKRKGIETWAAQHTPNVWCM 46 Query: 72 QEMGSYNA-----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 QE+ + + + + T ++ ++ + +A+ + Sbjct: 47 QEVRAPQSEIDPIFDEFAFEYTTAGAIDSQDRLDRTNEVCRVKGRAGVALLAD---LDVT 103 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 + + R + G + V+ +++ + D L Sbjct: 104 ARRYGLPGLTQDVDSGRWIENDITTPAGNLLTVVCVYVHAGNTDD--PVKMEQKYRFLDT 161 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDP 230 + + + + ++ GDFN + + + Sbjct: 162 MLNRMGELRDEAADGGRQALLCGDFNIAHTSADIKNAKANEKHAGFLPEERAYVDRWLGE 221 Query: 231 NDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYN 281 + + + +DY + + ++ Sbjct: 222 YGFVDVTRRLAGDIQGPYTWWSQRGRAFDNNVGWRLDYQFATPALAETAVS-------FD 274 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 D S R SDH P++I Y+F Sbjct: 275 IDKAPSYDTRWSDHAPLTITYEF 297 >gi|225682536|gb|EEH20820.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Paracoccidioides brasiliensis Pb03] Length = 607 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 39/360 (10%), Positives = 85/360 (23%), Gaps = 75/360 (20%) Query: 20 VAQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 +K +S+N + + + LL K +ADIV LQE+ Sbjct: 218 QNEKFTALSYNTLCDRSATHQQHGYAPSRALAWEYRRDLLLNEIKGYNADIVCLQEIDQG 277 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL- 131 + + + + ++ + K + + + Sbjct: 278 SYHGFFREQLAYNDYKGVYWPKGRAQGMPEEEAKVVDGCATFFKGSKYILLEKNMIHFGQ 337 Query: 132 ---------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYS 178 G D ++R + + ++ ++G+++ V+++HL ++ + Sbjct: 338 TAVRRPDAKGQDDIYNRLWQKDNIAVVTYLENRLSGERLIVVNVHLYWDPAYKDVKLIQA 397 Query: 179 PSCSLLSQQAQWLKDWITQKKESLV---------------------------------PF 205 Q I + P Sbjct: 398 AILMEEVTQLAEKYAKIPACIDKTAFRFSEPENSTDGDGTATPAEPAPSVEYSSGSQIPL 457 Query: 206 VIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC----- 245 +I GDFN ++ + + F + Sbjct: 458 IICGDFNSYPGSAVYELMNRGHLIEDHPDLEKRLYGNLSRLGMSYPFNLKSAYGAIGELE 517 Query: 246 NANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 N IDY + + SDH I ++ F Sbjct: 518 FTNYTPDFADVIDYIWYTSNSLQVTGLLGEVDREYLQRVPGFPNYHFPSDHLAIMAEFSF 577 >gi|147920374|ref|YP_685852.1| exodeoxyribonuclease III [uncultured methanogenic archaeon RC-I] gi|110621248|emb|CAJ36526.1| exodeoxyribonuclease III [uncultured methanogenic archaeon RC-I] Length = 257 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 39/306 (12%), Positives = 81/306 (26%), Gaps = 77/306 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80 ++ ++SWN+N L + + + DI+ LQE Sbjct: 3 ELEILSWNVNGLRAILKKGF---------------VDFMQEKNPDILCLQETRASEEQLP 47 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++ + +++++ + + +A+ K + + D R Sbjct: 48 PEIMTSWGYHVYFASGEKKGY----------SGVAILSKVKPLSVARGFGIPEFDREGR- 96 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 ++ + +L+I+ + + + A L K Sbjct: 97 --------VLIADYGAFVLLNIYFPNGKASPERLAYKMRFYNAFLEYADRL-------KA 141 Query: 201 SLVPFVIAGDFNRKINYLGN---------------NDDFWKTIDPNDSLIRFPKEKDSRC 245 V+ GD N + + + + + F D Sbjct: 142 QGRKIVVCGDVNTAHKEIDIARPRENSKISGFLPVERAWMDKLIAHGYVDTFRLFNDQPG 201 Query: 246 NANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 IDYF + +N + L + SDHCP Sbjct: 202 QYTFWDTVTRARERNVGWRIDYFFVSENLKEQLKAAFIMTEI-----------MGSDHCP 250 Query: 298 ISIDYD 303 I I D Sbjct: 251 IGIRLD 256 >gi|94495762|ref|ZP_01302342.1| exodeoxyribonuclease III [Sphingomonas sp. SKA58] gi|94425150|gb|EAT10171.1| exodeoxyribonuclease III [Sphingomonas sp. SKA58] Length = 262 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 83/303 (27%), Gaps = 72/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NIN + L ++ D+ LQE+ + + Sbjct: 5 MRIATFNING----------------IKARLPRLLEWLDETRPDVACLQEIKTSDE---- 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-NVRVLQQSYPLLGAKDSFSRAGN 142 + +A+ + + V + +D SR Sbjct: 45 ------TFPIKDIEDAGYGAIWHGQKGFNGVAILARGDAPVEVRRGLEGEPEDEHSRY-- 96 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +E + K + V I+L + + Y + L+ + Sbjct: 97 -------LEADVKGVRVASIYLPNGNPQPGPKFDYK------LRWMDRLRRRAAEIWTEE 143 Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 VP V+AGD+N + + + ++ + + Sbjct: 144 VPAVLAGDYNVIPRDVDTFSVKAMADDALMQPESRAAYRRMLNDGWTDAILSRHPAGGVW 203 Query: 247 ANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID+ ++ A LI D ++ SDH P Sbjct: 204 TFWDYQANSWPRDAGFRIDHLLLSPAAADRLIDA-------RVDRDFRGREKASDHAPTW 256 Query: 300 IDY 302 ++ Sbjct: 257 VEL 259 >gi|302555042|ref|ZP_07307384.1| endonuclease/exonuclease/phosphatase [Streptomyces viridochromogenes DSM 40736] gi|302472660|gb|EFL35753.1| endonuclease/exonuclease/phosphatase [Streptomyces viridochromogenes DSM 40736] Length = 439 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 40/325 (12%), Positives = 96/325 (29%), Gaps = 55/325 (16%) Query: 2 IRKYVLALVFFLVPCTA-----------SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT 50 +++ + LV + CT + + ++++N+ L E + + Sbjct: 1 MKRLIGTLVATALACTGLAATSAAPAAAADSGSFSVLTYNVAGLPEGLSSGHPEKNTPLI 60 Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 + DIV +QE +Y+A Y+ + + + Sbjct: 61 SPRLGA---------YDIVNVQEDFNYHA-----------ALYAGDDHAHRTATSGGVPF 100 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 + + Q + ++ + G + + ++H + Sbjct: 101 GDGLNTLSDHPFEDFQRVKWSKCTGTNCLTPKGFSLARVRLAEGVYVDLYNVHTNADDTA 160 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 D+L + + L D+I + ++ GD N + G D+ + Sbjct: 161 DALAARRAN--------VEQLSDFIQAN-SAGNAIIVMGDTNTRYTRSG--DNIRTLLSE 209 Query: 231 NDSLIRFPKEKDSR-----------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 N + + C + +D + + L + Sbjct: 210 NGLTDAWVQRVKGGTPPAQGGAPLVCPTTAPTDDCEVVDKILYRGSKLVNLNATRYHNDW 269 Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304 + + S G LSDH P ++D+ + Sbjct: 270 AS--FLDSAGGNLSDHFPHTVDFSY 292 >gi|256028521|ref|ZP_05442355.1| exodeoxyribonuclease III [Fusobacterium sp. D11] gi|289766441|ref|ZP_06525819.1| exodeoxyribonuclease III [Fusobacterium sp. D11] gi|289717996|gb|EFD82008.1| exodeoxyribonuclease III [Fusobacterium sp. D11] Length = 253 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 80/301 (26%), Gaps = 78/301 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + + Y +ADI LQE +A Sbjct: 1 MKLISWNVNGIRA---------------AIKKGFLDYFNEQNADIFCLQETK-LSAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + G R Sbjct: 45 LELKGYHQYWNYAEKKGY----------SGTAIFTKQEPLSVS----YGLGIEEHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +K +++ ++ + + ++ ++ Sbjct: 91 -----VITLEFEKFYMVTVYTPN-------SKDELLRLDYRMIWEDEFRKYLKNLEKKK- 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + + + F + Sbjct: 138 PVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKFTELLDSGFIDTFRYFYPNLEQVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + K L+ + SDHCP+ Sbjct: 198 SWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEIHTQI-----------EGSDHCPVV 246 Query: 300 I 300 + Sbjct: 247 L 247 >gi|468371|gb|AAA21019.1| apurinic/apyrimidinic endonuclease [Rattus norvegicus] Length = 316 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 76/311 (24%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + + +++ SWN++ L + K DI+ LQE Sbjct: 51 TSASGKSATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 95 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K + + S+ + ++ + + + + G Sbjct: 96 KCSE------NKLPAELQELPGLTHQYWSAPSDKEGYSGVGLLSRQCPLKVS----YGIG 145 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R V + ++ ++ + + + L Sbjct: 146 EEEHDQEGRVIVA-----EFESFILVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKDLA-- 198 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 199 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQEAQGFGEMLQAVPLADSFR 252 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ Q+ L Sbjct: 253 HLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSQSLLPALCDSKIRSKAL--------- 303 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 304 --GSDHCPITL 312 >gi|332877167|ref|ZP_08444917.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684910|gb|EGJ57757.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 348 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 36/352 (10%), Positives = 95/352 (26%), Gaps = 64/352 (18%) Query: 2 IRKYVLALVFFLVPCTASVAQKVR-----LVSWNINTLSEQEGVSLWKN----------- 45 +++ + + F++ T + AQ+ + + +N L + + Sbjct: 1 MKRMFMVMGLFVLLFTVARAQEKKFGMYAVGFYNQENLFDTIHDEGKNDFEYLPDGAMKW 60 Query: 46 SVKRTTSDYTLLRQYAKNLDAD--------IVFLQEMGSYNAVAKVFPKNTWCIFYSTER 97 + + + + + D ++ + E+ + + + + + Sbjct: 61 NGMKYFAKLKNMATVLSEMGTDKLPNIGASVIGVSEVENSRVMQDLVEQPPLK---ARGM 117 Query: 98 LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 H + + A+ + + + S R + + ++ G + Sbjct: 118 KFVHIEGPDKRGVDCALIYNPRFFTPEKSFLQPYVYEAKDSAYHTRGFLTVQGKLAGDDV 177 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 + H S + Q + LKD I++ + ++ GD N Sbjct: 178 TFIVCHWPSRAAVSYYRERAGK-------QVRMLKDSISK-ANPEMKIIVMGDMNDDPFS 229 Query: 218 LGNNDDFWKTIDPND------SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 + D + D VM N Sbjct: 230 PSMAKALGAKREMKDVGKSDLYNPWWNVLAKDGRGTLMYDGKWNLFDQIVMTPNLLDLDG 289 Query: 272 QESFSEILYNEDDIKSRGK-----------------------RLSDHCPISI 300 ++ +S + + +++I SR SDH P+ + Sbjct: 290 KKDYSTLKFFKNEIFSRNYLFQTEGRYKGNTKRTHAGGVWLNGYSDHLPVVV 341 >gi|302503490|ref|XP_003013705.1| hypothetical protein ARB_00156 [Arthroderma benhamiae CBS 112371] gi|291177270|gb|EFE33065.1| hypothetical protein ARB_00156 [Arthroderma benhamiae CBS 112371] Length = 691 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 39/363 (10%), Positives = 96/363 (26%), Gaps = 84/363 (23%) Query: 22 QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 K ++++N + + + + LL + DADIV LQE+ + Sbjct: 306 DKFTVLTYNTLCDRYATHQQYGYAPSKALAWELRRDLLLSEIRGQDADIVCLQEVDQGSY 365 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL--- 131 + + + ++ S + K + + + Sbjct: 366 HGFFREQLAYNDYKGVYWPKGRAQGMSEEEAKVVDGCATFFKGSKYILLEKAMIHFGQTA 425 Query: 132 -------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 G D ++R + + ++V ++G++I V++ + + ++ Sbjct: 426 VRRPDAKGQDDIYNRLWQKDNIAVVVYLENRMSGERIIVVN---AHIYWDPAYKDVKLVQ 482 Query: 181 CSLLSQQAQWLKD---------------------------------------WITQKKES 201 +++ ++ L + + S Sbjct: 483 SAIMMEEVTQLAEKFIKIPPCTDKTAFRFSEPEDETNNSENTSPPTPVEPSPSVEYSSPS 542 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC- 245 +P ++ GDFN + + D + + F + Sbjct: 543 QIPILVCGDFNSRPSSAVYNLLAHGRLEEEHPDLRDRLYGNLTRQGMTHPFTLKSAYSAI 602 Query: 246 ----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISI 300 N IDY N + + Y + SDH + Sbjct: 603 GELSFTNYTPGFTDVIDYIWYSSNLLQVTGLLGEVDKEYLQRVPGFPNYHFPSDHLALMA 662 Query: 301 DYD 303 ++ Sbjct: 663 EFS 665 >gi|260174301|ref|ZP_05760713.1| hypothetical protein BacD2_20756 [Bacteroides sp. D2] Length = 304 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 34/288 (11%), Positives = 85/288 (29%), Gaps = 37/288 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++++S+NI + + + K+ RT + + ++ +QE Sbjct: 47 NQIKVMSFNIRYYNTND--TGDKSWDARTAAFIP----MIEEQKPTVIGMQEARPPQLKW 100 Query: 82 KVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + R N + K P + + Sbjct: 101 LEENWKDYGYIGKGRRANNANNDEFVPIFYRKKAVELVKWDCFWLSETPDVPGSQGWDNT 160 Query: 141 GNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R A + + +GKK + ++ H+ + ++ + + + +++ Sbjct: 161 VPRVATWAIFKHIASGKKFFFINTHIDVGSTIAPGKS------------MEVIVNKMSEL 208 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 +P ++ DFN++I+ + + K S +D Sbjct: 209 NPEGLPMLLTADFNKQIDS-DIFNGVKTFMTNVRLSAPVTDSKYSYTGFGTANPY--IVD 265 Query: 259 YFVMD--QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + I + + I Y +SDH PI ++ Sbjct: 266 HIFCTGFKALKFETIDKVYQNITY-----------ISDHYPIVGKLEY 302 >gi|158338616|ref|YP_001519793.1| hypothetical protein AM1_5519 [Acaryochloris marina MBIC11017] gi|158308857|gb|ABW30474.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length = 316 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 44/292 (15%), Positives = 94/292 (32%), Gaps = 62/292 (21%) Query: 11 FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + +P + +R++S+NI DY ++Q + D DI+F Sbjct: 84 WLGLPSLGAQPSGLRVMSYNIW----------------TQNQDYGAIQQSIQQEDPDILF 127 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 L E+ + +A+ + + + +N A R + + + Sbjct: 128 LTEI-TKSAMRDLENRLDY------------PYSQRSNRGSNAFFSRYPILSATPEYPNV 174 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 +FS + ++ + + V+ IH S ++ +QQ + Sbjct: 175 TEHGLTFS-------LVTQIQTPQEVLTVVGIHPPIPL--------TRSSFAVRNQQFER 219 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 L +I Q ++ GDFN + + + + + S ++ + Sbjct: 220 LAPFIQQVPNR---VIVLGDFNTSPWSPYFDQFLQEANLWSATRGQGIWATWSYESSLPH 276 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 KIPID+ + + D + SDH P+ + Sbjct: 277 WFAKIPIDHI---------------TNRGFVCMDAWAGRANGSDHRPVIAEL 313 >gi|260425499|ref|ZP_05779479.1| exodeoxyribonuclease III [Citreicella sp. SE45] gi|260423439|gb|EEX16689.1| exodeoxyribonuclease III [Citreicella sp. SE45] Length = 262 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 32/307 (10%), Positives = 71/307 (23%), Gaps = 73/307 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L +WNIN L+ Q D++ LQE S Sbjct: 2 SFTLATWNIN----------------SVRLREALVCQLLTEEAPDVLCLQECKS------ 39 Query: 83 VFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 I R + + + +A+ K + Sbjct: 40 ----PVEKIPLEAFRALGYGHIVARGQKGYNGVAILSKLPIRDVGDRDFAQLGHARH--- 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 V +E + V + ++ + D + + ++DW ++ Sbjct: 93 ----VAAELENG---VTVHNFYVPAG--GDIPDRELNEKFGQKLDYLAEMRDWFRAERFG 143 Query: 202 LVPFVIAGDFNRKINYLG--NNDDFWKTID-------------PNDSLIRFPKEKDSRCN 246 ++ GD N ++ K + + + ++ Sbjct: 144 KS--ILVGDLNIAPREDDVWSHKALLKVVSHTPVEVAALAETQEAGNWVDITRKDIPEGQ 201 Query: 247 ANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ + ++ SDH Sbjct: 202 LYSWWSYRARDWDTADKGRRLDHVWATPDIAGAGHSS-------RILRAARGWEKPSDHA 254 Query: 297 PISIDYD 303 P+ +D Sbjct: 255 PVLATFD 261 >gi|6753086|ref|NP_033817.1| DNA-(apurinic or apyrimidinic site) lyase [Mus musculus] gi|113985|sp|P28352|APEX1_MOUSE RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName: Full=APEX nuclease; Short=APEN; AltName: Full=Apurinic-apyrimidinic endonuclease 1; Short=AP endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox factor-1; Contains: RecName: Full=DNA-(apurinic or apyrimidinic site) lyase, mitochondrial gi|220337|dbj|BAA14382.1| APEX nuclease precursor [Mus musculus] gi|533108|gb|AAC13769.1| apurinic/apyrimidinic endonuclease [Mus musculus] gi|533329|dbj|BAA07270.1| APEX nuclease [Mus musculus] gi|12850573|dbj|BAB28774.1| unnamed protein product [Mus musculus] gi|30851442|gb|AAH52401.1| Apurinic/apyrimidinic endonuclease 1 [Mus musculus] gi|148688888|gb|EDL20835.1| apurinic/apyrimidinic endonuclease 1 [Mus musculus] Length = 317 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + + +++ SWN++ L + K DI+ LQE Sbjct: 52 TSPSGKSATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 96 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K + + S+ + ++ + + + + G Sbjct: 97 KCSE------NKLPAELQELPGLTHQYWSAPSDKEGYSGVGLLSRQCPLKVS----YGIG 146 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R V + ++ ++ + + + L Sbjct: 147 EEEHDQEGRVIVA-----EFESFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKDLA-- 199 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 200 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 253 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ + L Sbjct: 254 HLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 304 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 305 --GSDHCPITL 313 >gi|218130823|ref|ZP_03459627.1| hypothetical protein BACEGG_02418 [Bacteroides eggerthii DSM 20697] gi|217987167|gb|EEC53498.1| hypothetical protein BACEGG_02418 [Bacteroides eggerthii DSM 20697] Length = 371 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 36/322 (11%), Positives = 83/322 (25%), Gaps = 79/322 (24%) Query: 14 VPCTASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 VP TA + + + ++N++ + T + +Y + Sbjct: 98 VPATAPAPNREGKSGGCLTVATYNVHHFG-----------NEITGYSCKEIARYMQQRHV 146 Query: 67 DIVFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 D++ QE G +++ + + + + + +R Sbjct: 147 DVLCFQEFGDNPHFTTDSLRRALSHWPYALIPADDS------------------IRGILP 188 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE------- 174 + YPL + + ++ + + + +L+ HL++ + Sbjct: 189 VAVFSRYPLAEGRFITYPRSSNCSMACDIVLGADTLRLLNNHLQTTSVSQNRRKWERELA 248 Query: 175 -NTYSPSCSLLSQQAQWLKD-----------WITQKKESLVPFVIAGDFNRKINYLGNND 222 N + A+ L + + S P ++ GDFN + Sbjct: 249 ANDTRREAQAVQDAAETLHENFVKRAAQTDSIVRLVIASPHPVLVCGDFNSLPSSYTYRQ 308 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 F + + + IDY Sbjct: 309 L------SGILQDGFKTGGHGYMYTYRYAKRMLRIDYAFHSSKLDC-------------T 349 Query: 283 DDIKSRGKRLSDHCPISIDYDF 304 D SDH P+ + Sbjct: 350 DYYSPDLDLCSDHNPVIFTVKY 371 >gi|153830066|ref|ZP_01982733.1| hypothetical protein A59_2694 [Vibrio cholerae 623-39] gi|148874465|gb|EDL72600.1| hypothetical protein A59_2694 [Vibrio cholerae 623-39] Length = 400 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 48/373 (12%), Positives = 89/373 (23%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R ++ + LDADIV L E Sbjct: 4 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 63 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116 + + S R D I T + Sbjct: 64 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 123 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162 R K V++ Q + ++ + R + ++ G KI V Sbjct: 124 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 183 Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211 H KS + + L Q + VI GD Sbjct: 184 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 243 Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243 N D I + + K Sbjct: 244 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDSGAEIKHSYGYLNAVAMKHP 303 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290 + +D+ ++ + ++ + I E + Sbjct: 304 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 363 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 364 RASDHDPAVLELN 376 >gi|159045821|ref|YP_001534615.1| putative endonuclease/exonuclease/phosphatase [Dinoroseobacter shibae DFL 12] gi|157913581|gb|ABV95014.1| putative endonuclease/exonuclease/phosphatase [Dinoroseobacter shibae DFL 12] Length = 1123 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 43/354 (12%), Positives = 85/354 (24%), Gaps = 72/354 (20%) Query: 17 TASVAQKVRLVSWNI-------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 V +++VS+N+ L++ S + L +DAD+ Sbjct: 662 APDVGGSLKVVSFNVLNYFTTLEGLTDNGNTPRGAESPEELERQAEKLVSAFLEMDADVY 721 Query: 70 FLQEMGSY-----------NAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVR 117 L E+ + A+ + + ++ + D I + Sbjct: 722 GLIELENDFASDPNDPTDVTAIQDLVDRLNAASGAEIYDFVDPGQEFVGTDAIAVGFIYK 781 Query: 118 KKNV-------RVLQQSYPLL--------GAKDSFSRAGNRRAVELLV--EINGKKIWVL 160 V + Q++ G + + NR AV +G + + Sbjct: 782 TTTVGLVGDAAILDTQAFLDPLDDGDDSNGDETPNGDSFNRAAVAQTFVEIESGGEFTAV 841 Query: 161 DIHLKSFCFLDSLENT--------YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 H KS L + + + +I GD N Sbjct: 842 VNHFKSKGSLTGAAEDENAGDGAGNNNATREAAAAELAAWLETNPTGSDDPDVLILGDLN 901 Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 T++ + +DY + + + Sbjct: 902 SYARETPI-----TTLEDAGYTNLVRALSGEEAYGYRFSGEVGSLDYAMGTDSMTSQVTG 956 Query: 273 ESFSEILYNEDDIKSRGK-----------------------RLSDHCPISIDYD 303 I +E I + R SDH P+ + D Sbjct: 957 AVEWTINSDEFVIYDYNEESTFGSPILRPTDQGLFDGTNPARNSDHDPVIVGLD 1010 >gi|49082810|gb|AAT50805.1| PA4172 [synthetic construct] Length = 267 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 83/304 (27%), Gaps = 70/304 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++ ++N+N + L + + DIV LQE+ + +A Sbjct: 2 DTLKIATFNVNG----------------IQTRLAALLAWLEREAPDIVCLQELKTPDA-- 43 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +A+ ++ + L+ L G Sbjct: 44 --------RFPAAALEKAGYGAIWQGQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRY 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 AV + V ++L + + Y + + L + ES Sbjct: 96 LEAAV--------DGLLVASLYLPNGNPQPGPKFDYKLA------WFEHLIRHAAELMES 141 Query: 202 LVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCN 246 P V+AGDFN ++ D + ++ + + + R Sbjct: 142 GHPVVLAGDFNVVLSDFDIYDTRSWKKDALLQPESRECFERLLRQGWVDALRQRFPDRRL 201 Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ + L D + SDH P Sbjct: 202 YTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDAGV-------DRWVRGEEHASDHAPA 254 Query: 299 SIDY 302 + Sbjct: 255 WVSL 258 >gi|330976189|gb|EGH76251.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 233 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 77/256 (30%), Gaps = 41/256 (16%) Query: 54 YTLLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFY----STERLINHSKRDSN 107 LR+ + + ADIVFLQE+ + KV T + S + + Sbjct: 12 LPELREAVRTVSADIVFLQEVHGEQQSHARKVKDWPTISQYEFLADSMWSDFAYGRNAVY 71 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 D A+ K + ++ + S R + ++E+ V + + Sbjct: 72 PDGDHGNALLSKYPIIQHENLDI-----SIHGTEQRGLLHCILEVPHAG-RVHAVCVHLG 125 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 + QQ + L + + + P ++AGDFN + Sbjct: 126 LR-----------ENHRRQQLKLLNELMAR-IPEGEPVIVAGDFNDW------RRRADAS 167 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + + F + + + + +D + S Sbjct: 168 LQGSGLHEVFVERFGAPAKSFPARWPLLCLDRIYVRNATSHRPKVLS-----------SR 216 Query: 288 RGKRLSDHCPISIDYD 303 LSDH P++++ Sbjct: 217 PWSHLSDHAPLAVELT 232 >gi|296532202|ref|ZP_06894954.1| exodeoxyribonuclease III [Roseomonas cervicalis ATCC 49957] gi|296267473|gb|EFH13346.1| exodeoxyribonuclease III [Roseomonas cervicalis ATCC 49957] Length = 268 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 36/307 (11%), Positives = 74/307 (24%), Gaps = 72/307 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL++WNIN LL + + L+ D+V LQE ++ Sbjct: 4 LRLLTWNIN----------------SVRLRMPLLTRLVQELEPDVVCLQETKCP---DEL 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + A+ + +Q P AK G Sbjct: 45 FPHEPLAALGYAH------RAVRGMKGYNGTAILSRLPFAPRQDDPDWCAKGDCRHVG-- 96 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202 + +++ G + L F + + + + ++ + Sbjct: 97 ----VDLDVPGG------LELHDFYVPAGGDIADREANPKFAHKLDFVAEATAWNAARGP 146 Query: 203 -VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 V+ GD N + Sbjct: 147 AKRAVMVGDLNIAPLECDVWSHRQLLDVVSHTPVEVAALTAWQQAGAWHDAIRHFVPPPE 206 Query: 246 NANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ + Q+ L + + SDH Sbjct: 207 KVYTWWSYRARDWEASDRGRRLDHVWVSQDLAGSLRRHHIH-------KAARGWTQASDH 259 Query: 296 CPISIDY 302 P+ ++ Sbjct: 260 VPVLVEL 266 >gi|160891380|ref|ZP_02072383.1| hypothetical protein BACUNI_03830 [Bacteroides uniformis ATCC 8492] gi|156858787|gb|EDO52218.1| hypothetical protein BACUNI_03830 [Bacteroides uniformis ATCC 8492] Length = 217 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 30/242 (12%), Positives = 62/242 (25%), Gaps = 36/242 (14%) Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 +QE+ + + T + P Sbjct: 1 MQEVLHNQMEDLKRGLPQYTALGVGRDDGKEAGEYCPIFFRTDRFTLVEYGNFSLSEQPE 60 Query: 131 LGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + + NR ++ + NG+K + HL + + L+ + Sbjct: 61 TIGIKGWDASYNRVTTWAILQEKNNGQKFVYFNTHL-----DNDGKTARKEGVQLILDKI 115 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + + +P +I GDFN +T++ + + Sbjct: 116 KEIA--------PDMPAIITGDFNCTPGEEP-----LQTLEKGGMENAAKTAAVTYGPSW 162 Query: 249 KNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 ++ +DY + + Y K LSDHCPI ++ Sbjct: 163 SFHDFGRLPVEERVLLDYVFVTK---------GAKIDRYRVIQDKPENSYLSDHCPILVE 213 Query: 302 YD 303 Sbjct: 214 LT 215 >gi|84662732|ref|NP_001014245.2| deoxyribonuclease-1-like 1 precursor [Rattus norvegicus] gi|91206585|sp|Q2QDE7|DNSL1_RAT RecName: Full=Deoxyribonuclease-1-like 1; AltName: Full=DNase X; AltName: Full=Deoxyribonuclease I-like 1; Short=DNase I-like 1; Flags: Precursor gi|73921496|gb|AAZ94278.1| DNase X [Rattus norvegicus] gi|149029873|gb|EDL84985.1| deoxyribonuclease 1-like 1, isoform CRA_a [Rattus norvegicus] Length = 312 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 78/303 (25%), Gaps = 33/303 (10%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +R V+A + L+ R+ ++N + L+ S L Q Sbjct: 19 MRGLVVASLLILLVGGT---DAFRICAFNAHRLTLT---------KVIKESVMDTLVQIL 66 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 DI+ LQE+ + +F S L + S R Sbjct: 67 ARC--DIMVLQEVVDSSQNTVLFLLQKLQSSKSYSFLNSSLLGRSTYKEKYVYIYRSDKT 124 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPS 180 +VL + R + K + V+ + L + E Sbjct: 125 QVLN-----FYQYNDTEDIFAREPFVAQFTLPSKILPSVVLVPLHTTPKDVEKELNALYD 179 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 L Q ++ GDFN L + + Sbjct: 180 VFLDVSQRWQ-----------NENVILLGDFNADCASLAKKRLNSLLLRTKAGFHWVIPD 228 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + I + Q K L + + + R+SDH P+ + Sbjct: 229 GEDTTVRASTNCTYDRI--VMHGQGCQKLLKAAATFDFPRRFQLTEEEALRVSDHYPVEV 286 Query: 301 DYD 303 + + Sbjct: 287 ELN 289 >gi|126463266|ref|YP_001044380.1| exodeoxyribonuclease III Xth [Rhodobacter sphaeroides ATCC 17029] gi|126104930|gb|ABN77608.1| exodeoxyribonuclease III Xth [Rhodobacter sphaeroides ATCC 17029] Length = 262 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 33/306 (10%), Positives = 70/306 (22%), Gaps = 71/306 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L +WNIN L+ + DI+ LQE S Sbjct: 2 TFTLATWNIN----------------SVRLREALVSRLLTEEMPDILCLQECKSPV---- 41 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + L H + +A+ K V + + Sbjct: 42 -----EKMPLEAFRALGYHWCVARGQKSYNGVAILSKLPLVDAGDHDFADLGHARH---- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V +E + + + ++ + D + + ++DW Sbjct: 93 ---VSAALENG---VTIHNCYVPAG--GDIPDREQNVKFGQKLDYLTRMRDWCRADTPKK 144 Query: 203 VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N ++ D + + + I ++ Sbjct: 145 A--ILVGDLNIAPREDDVWNHKSLLKIVSHTPIEVDHLNALMESGAWIDVTRKDLPEGRL 202 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + SDH P Sbjct: 203 YSWWSYRSPDWEAADKGRRLDHIWATPDIVNAAHGS-------RILKAARGWLQPSDHAP 255 Query: 298 ISIDYD 303 + +D Sbjct: 256 VFATFD 261 >gi|302665175|ref|XP_003024200.1| hypothetical protein TRV_01633 [Trichophyton verrucosum HKI 0517] gi|291188246|gb|EFE43589.1| hypothetical protein TRV_01633 [Trichophyton verrucosum HKI 0517] Length = 693 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 39/363 (10%), Positives = 96/363 (26%), Gaps = 84/363 (23%) Query: 22 QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 K ++++N + + + + LL + DADIV LQE+ + Sbjct: 308 DKFTVLTYNTLCDRYATHQQYGYAPSKALAWELRRDLLLSEIRGQDADIVCLQEVDQGSY 367 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL--- 131 + + + ++ S + K + + + Sbjct: 368 HGFFREQLAYNDYKGVYWPKGRAQGMSEEEAKVVDGCATFFKGSKYILLEKAMIHFGQTA 427 Query: 132 -------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 G D ++R + + ++V ++G++I V++ + + ++ Sbjct: 428 VRRPDAKGQDDIYNRLWQKDNIAVVVYLENRMSGERIIVVN---AHIYWDPAYKDVKLVQ 484 Query: 181 CSLLSQQAQWLKD---------------------------------------WITQKKES 201 +++ ++ L + + S Sbjct: 485 SAIMMEEVTQLAEKFIKIPPCTDKTAFRFSEPEDETNNSENTSPPTPVEPSPSVEYSSPS 544 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC- 245 +P ++ GDFN + + D + + F + Sbjct: 545 QIPILVCGDFNSRPSSAVYNLLAHGRLEEEHPDLRDRLYGNLTRQGMTHPFTLKSAYSAI 604 Query: 246 ----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISI 300 N IDY N + + Y + SDH + Sbjct: 605 GELSFTNYTPGFTDVIDYIWYSSNLLQVTGLLGEVDKEYLQRVPGFPNYHFPSDHLALMA 664 Query: 301 DYD 303 ++ Sbjct: 665 EFS 667 >gi|114046513|ref|YP_737063.1| endonuclease/exonuclease/phosphatase [Shewanella sp. MR-7] gi|113887955|gb|ABI42006.1| Endonuclease/exonuclease/phosphatase [Shewanella sp. MR-7] Length = 377 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 36/365 (9%), Positives = 83/365 (22%), Gaps = 78/365 (21%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFL 71 + +++ + N+ E S + + DIV Sbjct: 10 SSANTTQSNIKIATVNLFNFIEPPSAFYDFENIYSHGQWQKKCQWFSELLDQHHPDIVGF 69 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV---LQQSY 128 QE+ S + ++ ++ A+A R + V + + Sbjct: 70 QEVFSPEPLRQLA-LQQGLTHFAVVDSATLVSDYIYQSPVVALASRFPILEVHAIEPEVH 128 Query: 129 PLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFL----------------- 170 + S + +R+ + V + +H KS Sbjct: 129 LVAAMGLSSEFSFSRKVLRATVAVPQIGPCDCYVVHFKSKRPGLALEPHPMGLSLNAPSD 188 Query: 171 ----------DSLENTYSPSCSLLSQQAQWL-KDWITQKKESLVPFVIAGDFNRK----- 214 S +A L + +++ + P ++ GDFN Sbjct: 189 LKLHAETKLLTEQALGRWASTMQRGAEAALLFHAILARRQSAKHPVILMGDFNDSLSLGA 248 Query: 215 ----------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN------------------ 246 ++ + F + Sbjct: 249 LDALTLQGEALHSNDIKAAGLGHLSDVMLAQVFAHYRLQDAYELFIEANLADNAAHYREH 308 Query: 247 ---ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKRLSDHCP 297 + +DY ++ + + Y D R +DH P Sbjct: 309 RAPTHYYGPKGSVLDYVLLSNEFDASDSRSLAQVVDYQTCDRHLVRPEYERDAYSTDHAP 368 Query: 298 ISIDY 302 + ++ Sbjct: 369 VMVEL 373 >gi|312951002|ref|ZP_07769910.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0102] gi|310630957|gb|EFQ14240.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0102] gi|315154039|gb|EFT98055.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0031] Length = 254 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 83/287 (28%), Gaps = 48/287 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+ V + + + + Q D + +QE+ Sbjct: 1 MKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138 Y+ ++ + AI ++ ++ + Y L Sbjct: 54 A--------YTIFTCLSAEREGDGQGEGLAILYNEQKIQAIDTGYFWLSETPQQPSIHPE 105 Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A+ L + V+++HL + + ++ + L D I Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNANKNLRNK 254 + P ++ GDFN + + + K N + P+ K Sbjct: 158 EY-----PTLLMGDFNAE-SGEEVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAEL 211 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + + + G+ SDH P+ + Sbjct: 212 EEIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248 >gi|269795838|ref|YP_003315293.1| metal-dependent hydrolase [Sanguibacter keddieii DSM 10542] gi|269098023|gb|ACZ22459.1| metal-dependent hydrolase [Sanguibacter keddieii DSM 10542] Length = 657 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 38/287 (13%), Positives = 73/287 (25%), Gaps = 50/287 (17%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 A + L+ WN++ + D + + A +V LQE+ Sbjct: 415 PAPSEGTITLLDWNLHYGVSPDPG-----------VDLDEIVDVVASSGAQVVTLQEVSR 463 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + T+ +RL S D V + Sbjct: 464 GWVMGGGADMATYL----EQRLGMRSVFVPAADRQFGNMVLWDDALGDGTDVARTALPYG 519 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R AV + ++++G + V +HL+ + + Q L + Sbjct: 520 AG-PQRRSAVSVTLDLDGTPLRVTSLHLQH----------RAGNIDTRLDQITAL---LD 565 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 S V AGD N + + ++ + D + Sbjct: 566 ADPVSGARVV-AGDLNAEPGWPEV-----ALLESAGLVSAVDSAGDPDVTTFPSDVPTER 619 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID+ + + + SDH P+ Sbjct: 620 IDWVF-----GDGVTFSDIEVLDTRQ----------SDHRPVVTTVS 651 >gi|256380462|ref|YP_003104122.1| exodeoxyribonuclease III Xth [Actinosynnema mirum DSM 43827] gi|255924765|gb|ACU40276.1| exodeoxyribonuclease III Xth [Actinosynnema mirum DSM 43827] Length = 264 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 80/305 (26%), Gaps = 70/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81 + + + N+N L ++ AD+V LQE+ + Sbjct: 2 LTVSTVNVNGLRAAAKKGY---------------LEWLAATGADVVCLQEVRAEPGQLAD 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +V W ++ S + +AV + + + + R Sbjct: 47 EVRDPEGWHSAHA----------HSAVKGRSGVAVLTREQPTAVRVGFGVEEFEHSGR-- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + VE+ G + V ++L S ++ + L++ + Sbjct: 95 -----YVEVELTG--LVVGSLYLPSGEVGTERQDEKDRFMAAFLPYLVELRE---KAAAD 144 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD+N + ++ + Sbjct: 145 GREVLVCGDWNIAHRQADLKSWKTNQKSAGFLPYEREWLGSVFESGYTDVVRALHPDVEG 204 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDY V + + + +R SDH P Sbjct: 205 PYSWWSYRGKAFDNDSGWRIDYQVASEGLAARA-------ETAVVERAATYAERWSDHAP 257 Query: 298 ISIDY 302 ++++Y Sbjct: 258 VTVEY 262 >gi|261362108|gb|ACX71488.1| sphingomyelinase [Bacillus thuringiensis] Length = 225 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 78/208 (37%), Gaps = 21/208 (10%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S+ +A+ K + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNR 213 Q + ++D+I + + +I GD N Sbjct: 198 QLKEIQDFIKNKNIPNXEYVLIGGDMNV 225 >gi|189025772|ref|YP_001933544.1| hypothetical protein TPASS_0544 [Treponema pallidum subsp. pallidum SS14] gi|189018347|gb|ACD70965.1| hypothetical protein TPASS_0544 [Treponema pallidum subsp. pallidum SS14] Length = 624 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 38/353 (10%), Positives = 88/353 (24%), Gaps = 81/353 (22%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 V A+ + + S+N+ S R K D++ L E Sbjct: 291 VSTIQFNARFLNIASYNVENFSAGNKAD-----SARARVFAKHFVNDLKA--PDVICLVE 343 Query: 74 MGSYNAVAK---------------------------VFPKNTWCIFYSTERLINHSKRDS 106 + + K + + + ++ Sbjct: 344 IQDDDGAKKHHHCTSAQHTLDLLVRAMAEFSAVRYKAVNIDPQDNAPAGVQSLDADGGQP 403 Query: 107 NNDIHTAIAVRKKNVRVLQ------------------------QSYPLLGAKDSFSRAGN 142 +I R V+++Q P S Sbjct: 404 GGNIRCCYLYRTDRVQLVQDQTGSAGTGTFHSVAQMVRGGRQMVKNPARIGVGQESFQNT 463 Query: 143 RRAVELLVEI-----NGKKIWVLDIHLKSFCFLDSLENTYSPSC------SLLSQQAQWL 191 R+++ + GK V+ H S D + + P+ + Sbjct: 464 RKSLVAHFQFVSGVNKGKDFVVVTNHFSSKRGDDPVWGSTQPAQEHSKRKRIQQAAQVAA 523 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 +++ + +P V+AGDFN + ++ Sbjct: 524 FVAALRRERADLPVVVAGDFNDFWFSDVI-----QKFTAVGMHSALDLLPETERYTYVYR 578 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +D + + + + + + + + +R+SDH P+ + + Sbjct: 579 GYSQTLDNIL-------SVGARTETADILHINAEQPARERVSDHDPVFVQLSW 624 >gi|332828520|gb|EGK01220.1| hypothetical protein HMPREF9455_02412 [Dysgonomonas gadei ATCC BAA-286] Length = 258 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 44/301 (14%), Positives = 79/301 (26%), Gaps = 54/301 (17%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 + AL+ L RL+++N + S KN Sbjct: 9 IICALLGLLTNGVLMAQTSFRLMNFNTRMSGQMVNYSAKPF------------ATLIKNY 56 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRV 123 + D V LQE+ + K+ + + + +A+ K Sbjct: 57 NPDFVILQEVDYFTVRNG--GKDFTTELAAEMGMFSAFGPAIVYQQGEYGVAILSKYPIQ 114 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + PL + R + + V + G V D+ + Sbjct: 115 KISNNPLTSSS--ADMKEKRTVLYIDVILPGSNEKVRVAATHLDHSTDN----------V 162 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 A+ L +I + P ++AGDFN K ++ FP Sbjct: 163 RLDMARQLDSYI----GNSFPTILAGDFNAKPGENAIVQGMSNWQRICNNFPTFPAI--- 215 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY + + +SDHC + D + Sbjct: 216 ---------PTSKIDYIFAKPTGKWTVKSYEIL-----------KETGISDHCALVTDVE 255 Query: 304 F 304 + Sbjct: 256 Y 256 >gi|255976087|ref|ZP_05426673.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis T2] gi|307279055|ref|ZP_07560113.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0860] gi|255968959|gb|EET99581.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis T2] gi|306504180|gb|EFM73392.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0860] Length = 254 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 85/287 (29%), Gaps = 48/287 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+ V + + + + Q D + +QE+ Sbjct: 1 MKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138 Y+T ++ + + AI ++ ++ + Y L Sbjct: 54 A--------YTTFTCLSAEREGNGQGEGLAILYNEQKIQAIDTGYFWLSETPQQPSIHPE 105 Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A+ L + V+++HL + + ++ + L D I Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNANKNLRNK 254 Q P ++ GDFN + + + K N + P+ K Sbjct: 158 QY-----PTLLMGDFNAE-SEEAVHQLVQKKFQDSKNLATHYGPRGTFQNFIYTKPWAEL 211 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + + + G+ SDH P+ + Sbjct: 212 EEIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248 >gi|33592450|ref|NP_880094.1| hypothetical protein BP1340 [Bordetella pertussis Tohama I] gi|33601810|ref|NP_889370.1| hypothetical protein BB2834 [Bordetella bronchiseptica RB50] gi|33572096|emb|CAE41632.1| conserved hypothetical protein [Bordetella pertussis Tohama I] gi|33576247|emb|CAE33326.1| conserved hypothetical protein [Bordetella bronchiseptica RB50] gi|332381866|gb|AEE66713.1| hypothetical protein BPTD_1326 [Bordetella pertussis CS] Length = 252 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 39/292 (13%), Positives = 82/292 (28%), Gaps = 48/292 (16%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--- 74 ++R+++ N + LR+ + D+VFLQE+ Sbjct: 2 PPEPIRLRILTVNAHKGFTSFNRRF----------ILHELREALREARPDLVFLQEVLGE 51 Query: 75 -GSYNAVAKVFPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + A +P + F + ++ D H AV K V ++ L Sbjct: 52 HQRHAARHARWPAVSQYEFLADTLWSAYAYGRNAVYPDGHHGNAVLSKYPIVSHRNEDLS 111 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 R + ++++ + + + + +Q + L Sbjct: 112 VGA----AHEPRGMLHCVLDVRDAPAPLHALCVHLGLR-----------EAHRQEQLRRL 156 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 ++ Q + ++AGDFN T+ Sbjct: 157 CQYLRQHVPAQAAALLAGDFNDWRQRAD------ATLARCGLADVHRLALGHAARTFPAA 210 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +D + A + S + RLSDH P++ + Sbjct: 211 CPLLRLDRIYVRNVAGSEPRRLS-----------RRPWSRLSDHVPLAAEVT 251 >gi|88799498|ref|ZP_01115075.1| hypothetical protein MED297_03917 [Reinekea sp. MED297] gi|88777808|gb|EAR09006.1| hypothetical protein MED297_03917 [Reinekea sp. MED297] Length = 280 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 97/315 (30%), Gaps = 48/315 (15%) Query: 1 MIRKYVLALVFFLVPCTASVAQK-VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 M+R +++V L+ C ++A +R+ S NI+ L N + + Sbjct: 1 MVRLLSVSVVLSLLLCATALAGTPLRVASHNIHY-------ILPNNPDDDWETRRDAVIA 53 Query: 60 YAKNLDADIVFLQEMGSY-NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-AIAVR 117 ++ ADI+ QEM S+ V + W + + + +++ T I R Sbjct: 54 VIDDMAADILAFQEMESFVGGVNHQNLQLDWVLEHHPDYNAGAFSDNADQFPITQPILYR 113 Query: 118 KKNVRVLQ------QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 + + P + + + + + + + + Sbjct: 114 RDRFSLQTQGFFFFSETPDVIYSRQWDGRYPYFVSWVELFDHTNDRNLFVFNFHNDFASR 173 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND--DFWKTID 229 S S + +Q P ++ GDFN + + I Sbjct: 174 SNRRQSSELTAERIEQIA-----------GETPVILLGDFNAPVWFREVERFEPKLTPIK 222 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 P S R K ID+ ++ + ++ D + G Sbjct: 223 PGGSTNRILGLKLLPA-----------IDHILISDDF--------VADTDVQVWDRRYGG 263 Query: 290 KRLSDHCPISIDYDF 304 + SDH PIS D F Sbjct: 264 EYPSDHFPISADIRF 278 >gi|269798609|ref|YP_003312509.1| exodeoxyribonuclease III Xth [Veillonella parvula DSM 2008] gi|282849823|ref|ZP_06259207.1| exodeoxyribonuclease III [Veillonella parvula ATCC 17745] gi|294792738|ref|ZP_06757885.1| exodeoxyribonuclease III [Veillonella sp. 6_1_27] gi|269095238|gb|ACZ25229.1| exodeoxyribonuclease III Xth [Veillonella parvula DSM 2008] gi|282580760|gb|EFB86159.1| exodeoxyribonuclease III [Veillonella parvula ATCC 17745] gi|294456637|gb|EFG25000.1| exodeoxyribonuclease III [Veillonella sp. 6_1_27] Length = 251 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 73/304 (24%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L ++ LDADI LQE Sbjct: 1 MKLISWNVNGLRAAVTKGFMES---------------FNELDADIFCLQETKLQPD-QIS 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++++ + + AV + + + + D R Sbjct: 45 LELPGYEQYWNSAVKKGY----------SGTAVFTRIKPLSVTNGIGIEEHDQEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ +++ + + + + L + Sbjct: 91 -----VITAEYDNFYLVCCYTPNSQRELARLDYRMTWEDAFRNYLLEL--------DKKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + F Sbjct: 138 PVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAKMTELLGAGFTDTFRHLYPDAIEQY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ + + + + ++ SDHCP+ Sbjct: 198 SWWSYMGKARERNTGWRIDYFITSKRLDDKIQEAKIHQQIF-----------GSDHCPVE 246 Query: 300 IDYD 303 + D Sbjct: 247 LVID 250 >gi|1197173|dbj|BAA11841.1| deoxyribonuclease I precursor [Homo sapiens] Length = 282 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 37/283 (13%), Positives = 85/283 (30%), Gaps = 30/283 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AV 80 +++ ++NI T E + + + Q DI +QE+ + AV Sbjct: 22 SLKIAAFNIQTFGET---------KMSNATLVSYIVQILSRY--DIALVQEVRDSHLTAV 70 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K+ + +++ ++ R V + Y G + + Sbjct: 71 GKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYDDGCEPCGNDT 130 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 NR + ++ I D++ + L Q +W Sbjct: 131 FNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW---------- 180 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 L ++ GDFN +Y+ + + + + + + D Sbjct: 181 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAY----DRI 236 Query: 261 VMDQNAYK-FLIQESFSEILYNEDDIKSR--GKRLSDHCPISI 300 V+ + ++ +S + S + +SDH P+ + Sbjct: 237 VVAGMLLQGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEV 279 >gi|297581461|ref|ZP_06943384.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297534299|gb|EFH73137.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 869 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 48/373 (12%), Positives = 89/373 (23%), Gaps = 91/373 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R ++ + LDADIV L E Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDSRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116 + + S R D I T + Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592 Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162 R K V++ Q + ++ + R + ++ G KI V Sbjct: 593 RDKVVKLAQNHVIPMPSQQAPEVIDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652 Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211 H KS + + L Q + VI GD Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712 Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243 N D I + + K Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDSGAEIKHSYGYLNAVAMKHP 772 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290 + +D+ ++ + ++ + I E + Sbjct: 773 DSWSYSFNDEVGALDHLLISPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832 Query: 291 RLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 833 RASDHDPAVLELN 845 >gi|312892184|ref|ZP_07751681.1| Endonuclease/exonuclease/phosphatase [Mucilaginibacter paludis DSM 18603] gi|311295314|gb|EFQ72486.1| Endonuclease/exonuclease/phosphatase [Mucilaginibacter paludis DSM 18603] Length = 369 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 87/305 (28%), Gaps = 62/305 (20%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + +++R++++N+++ S + S + + D + ++E S+ Sbjct: 103 ARPEQIRMMAYNVHSFSN----------AQTNASSAQQIVSLVREQQPDFINMEEFYSFA 152 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + +A+ K + Q L Sbjct: 153 KGKFAMCDSIKAALQTPYYFYQPFSGTLAAGG--GLAIFSKFPIIHQGVIRLTQDYSDTK 210 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN---------------------TY 177 A+ + V+ + K V +HL+SF Sbjct: 211 ------AIFIDVKKDDKIFRVYCVHLQSFLLTAEDHVYMDSVSQKGKTNIRSSKRIVSKL 264 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + S Q +KD + Q P+++AGDFN + N F Sbjct: 265 KAAFIHRSAQVTMMKDHMAQCP---YPYIVAGDFNDTPSSYAVNQM------SKGIKNAF 315 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 ++ IDY ++ ++ + K+LSDH P Sbjct: 316 REKGRGLGRTYNGDIPNYQIDYILVSPQ--------------FDVLNYTVIEKKLSDHYP 361 Query: 298 ISIDY 302 I D Sbjct: 362 IRSDL 366 >gi|281423696|ref|ZP_06254609.1| exodeoxyribonuclease III [Prevotella oris F0302] gi|281402248|gb|EFB33079.1| exodeoxyribonuclease III [Prevotella oris F0302] Length = 250 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 83/303 (27%), Gaps = 77/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L G Q + L+AD LQE A Sbjct: 1 MKFISWNVNGLRACVGKDF---------------SQSFETLNADFFCLQETK-MQAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ ++ ++ A+ + + + D R Sbjct: 45 LQFPGYTSYWN----------YADKKGYSGTAIYARKEPIAVTYGIGIDEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + + ++ + + Sbjct: 91 -----VITLEYDNFFLVTVYTPN-------AQDGLRRLDYRMTWEDDFQAYL-HRLDEQK 137 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N D + + + + + Sbjct: 138 PVIVCGDLNVAHQEIDLKNPKSNRRNAGFTDEERDKMTQLLSHGFTDTFRTLYPEQVTYS 197 Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + R + IDYF++ L S ++ SDHCPI + Sbjct: 198 WWSYRFRAREKNAGWRIDYFLISDRLRPQLKDASIHTEIF-----------GSDHCPIEV 246 Query: 301 DYD 303 D + Sbjct: 247 DLE 249 >gi|253997612|ref|YP_003049676.1| exodeoxyribonuclease III Xth [Methylotenera mobilis JLW8] gi|253984291|gb|ACT49149.1| exodeoxyribonuclease III Xth [Methylotenera mobilis JLW8] Length = 256 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 41/307 (13%), Positives = 80/307 (26%), Gaps = 80/307 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VA 81 ++++S N+N + L + KN DAD++ +QE+ + Sbjct: 1 MKIISLNLNGIRSATNKG---------------LYAWLKNQDADVICMQELKAQAGDMTE 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + ++ +S + + G + Sbjct: 46 QMLNPEGYYGYFHYAEKKGYSGVGIYSKTKADSVI--------------EGLGIEDIDSE 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R +E + V+ ++L S + + Q L S Sbjct: 92 GRY-----LEARFGNLSVVSLYLPSGSSGEERQAFKFSVMERFMPQLHALVQ-------S 139 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 VI GD+N + D + + Sbjct: 140 GRDVVICGDWNIAHKEADLKNWKGNRKNSGFLPEERAWLTQLFDDMGWVDVYRTLYPDTT 199 Query: 246 NA-NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 +A N+ IDY + + S + +R SDH Sbjct: 200 DACYTWWSNRGQAWANNVGWRIDYQIATPAFAAKAVSTSV-----------YKDERFSDH 248 Query: 296 CPISIDY 302 P+ IDY Sbjct: 249 APLIIDY 255 >gi|124514320|gb|EAY55834.1| Exodeoxyribonuclease III [Leptospirillum rubarum] Length = 265 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 86/301 (28%), Gaps = 74/301 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +WN+N+L + + AD+V LQE +A Sbjct: 11 FKATTWNVNSL----------------KVRLPQVLDWLLREKADVVCLQETKLPDA---- 50 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + R I + S + +A+ + ++ D R Sbjct: 51 ------QFPFQAFREIGYDAVWSGQPTYNGVAILSNTPIEMTETSMDDHPDDH------R 98 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + V + + ++++++ + LDS + Y + L +I + + + Sbjct: 99 RFLSARV----RGVRIVNVYVPNGQDLDSPKFAYK------LEWLNRLTRYIEKVRAAPD 148 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GDFN + + I + R Sbjct: 149 PVLLMGDFNIVPGDLDTWDPAGFKDQIFHSPPERNALGNIFRTGFADLYRTLYPDRQE-F 207 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ++ ID + + + D + +R SDH P++ Sbjct: 208 SWWDYRMGSFHRNRGLRIDLILSTPPLSEQCQEVFI-------DREARKAERPSDHVPVT 260 Query: 300 I 300 Sbjct: 261 A 261 >gi|13162337|ref|NP_077062.1| DNA-(apurinic or apyrimidinic site) lyase [Rattus norvegicus] gi|1168468|sp|P43138|APEX1_RAT RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName: Full=APEX nuclease; Short=APEN; AltName: Full=Apurinic-apyrimidinic endonuclease 1; Short=AP endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox factor-1; Contains: RecName: Full=DNA-(apurinic or apyrimidinic site) lyase, mitochondrial gi|11878235|gb|AAG40859.1|AF309114_1 nuclease APEX [Rattus norvegicus] gi|624915|dbj|BAA07938.1| APEX nuclease [Rattus norvegicus] gi|5360709|dbj|BAA82124.1| Apex nuclease [Rattus norvegicus] gi|50926078|gb|AAH78816.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Rattus norvegicus] gi|149033628|gb|EDL88426.1| apurinic/apyrimidinic endonuclease 1, isoform CRA_a [Rattus norvegicus] Length = 317 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + + +++ SWN++ L + K DI+ LQE Sbjct: 52 TSASGKSATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 96 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K + + S+ + ++ + + + + G Sbjct: 97 KCSE------NKLPAELQELPGLTHQYWSAPSDKEGYSGVGLLSRQCPLKVS----YGIG 146 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R V + ++ ++ + + + L Sbjct: 147 EEEHDQEGRVIVA-----EFESFILVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKDLA-- 199 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 200 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGEMLQAVPLADSFR 253 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ + L Sbjct: 254 HLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 304 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 305 --GSDHCPITL 313 >gi|323465631|gb|ADX69318.1| Exodeoxyribonuclease A [Lactobacillus helveticus H10] Length = 284 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 35/307 (11%), Positives = 81/307 (26%), Gaps = 59/307 (19%) Query: 25 RLV---SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++ SWNI++L+ + + R + L+ DI+ +QE Sbjct: 8 KIMILISWNIDSLNAALTGTSARAEETRG------VLDKIHALNPDIIAIQETKLRATGP 61 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + S + + K S P +GA + G Sbjct: 62 TKKHQTILAEKFPEYDYVWRSSEEPARKGYAGTMYLYKKELTPAVSKPAIGAPEPMDEEG 121 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 ++ + K +V ++ + + + L + Sbjct: 122 R------IITLEFDKYFVTQVYTPNSGNGLKRLADRQVWDQKYIEYLKKLNE-------- 167 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P + +GD+N + + F K + Sbjct: 168 KKPVLASGDYNCAHTEIDLKHPENNHHSAGFTDEERADFTNLLDAGFTDTFRKVNGNVEG 227 Query: 247 ANKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + IDY+++ +++ + DHC Sbjct: 228 VYSWWAQRVRTAKANNSGWRIDYWLVSNRIADKVVRSEMIDTGKRA-----------DHC 276 Query: 297 PISIDYD 303 PI ++ + Sbjct: 277 PILLEIN 283 >gi|294827777|ref|NP_711208.2| sphingomyelinase C precursor [Leptospira interrogans serovar Lai str. 56601] gi|293385622|gb|AAN48226.2| sphingomyelinase C precursor [Leptospira interrogans serovar Lai str. 56601] Length = 567 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 44/302 (14%), Positives = 96/302 (31%), Gaps = 26/302 (8%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P ++S ++++S +I +S W + + + Y K + DI+ + + Sbjct: 85 PNSSSADIGIKILSHSI--FMAPTNLSSWGDLGQEERAQRIASSSYIK--NQDIIVFEGL 140 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQ 126 NA + K Y T + K + + + K + Sbjct: 141 SHNNAEKILLEKIRSEYPYQTNVVGRTKKGWNATLGAYTTSPMANGGVIIVSKWPIEEKV 200 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + + N+ + + +GKK V+ L++ ++ ++ Sbjct: 201 QYIFNNSNCGQDQYYNKGFAYVKINKDGKKFHVIGTQLQAREPDC-----FNSGETIRKL 255 Query: 187 QAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 Q +K +I + +I GD N D K + P D++ Sbjct: 256 QLNDIKSFIDSKDIPKDETVLITGDLNIIKGSNEYFDMISKLNVNEPRYVGVPFTLDTKT 315 Query: 246 NANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----KRLSDHCP 297 NA I +DY ++ + + + ++ + + K SD P Sbjct: 316 NALAAYYYEKEKPIYLDYILVSKLHAQPPVWQNLAYDPISNTTWKRSDGYTSYEFSDRYP 375 Query: 298 IS 299 + Sbjct: 376 VY 377 >gi|167772884|ref|ZP_02444937.1| hypothetical protein ANACOL_04272 [Anaerotruncus colihominis DSM 17241] gi|167664817|gb|EDS08947.1| hypothetical protein ANACOL_04272 [Anaerotruncus colihominis DSM 17241] Length = 300 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 47/292 (16%), Positives = 91/292 (31%), Gaps = 40/292 (13%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 +R+VS+N+ + + N + L Q+ + A IV +QE+ + V+ Sbjct: 32 IRVVSFNL-----KRDFGIALNRSHKWGQRRALAAQFIRESGATIVGVQELLPNMRDDVS 86 Query: 82 KVFPKNTWCIFYSTERLINH-SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++ + + + S S+ I A + P ++ Sbjct: 87 RLLDVDYSVLGFGRFSGAKPNSDEHSDIIIKNDNASVRLIKTFWLSKSPER-LSRAYFAV 145 Query: 141 GNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R V + + + V + HL C + + + + D++ Sbjct: 146 FPRICTVAEVYLTKLDRCVRVFNTHLDHICGI------------ARTLGIRVILDYMRSF 193 Query: 199 KES-LVPFVIAGDFNRKINYLGNN-----DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 E +P ++ GDFN K D + + D RFP ++ + Sbjct: 194 NEERPMPTILMGDFNAKPTSRPVRLLRACSDEYPQLHLTDVYTRFPAHINNTLHNFSGRV 253 Query: 253 NK--IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 PIDY + F + + G SDH P+ Sbjct: 254 RPGAQPIDYIFVSDE---------FEIVEAHIMTDPVDGHYPSDHYPLEATL 296 >gi|77360643|ref|YP_340218.1| hypothetical protein PSHAa1702 [Pseudoalteromonas haloplanktis TAC125] gi|76875554|emb|CAI86775.1| conserved protein of unknown function [Pseudoalteromonas haloplanktis TAC125] Length = 386 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 42/384 (10%), Positives = 95/384 (24%), Gaps = 91/384 (23%) Query: 10 VFFLVPCTASVA-----QKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYA 61 +F ++ CTA ++++ ++N+ E + ++ + Y Sbjct: 1 MFVILKCTAVEPLLIKNTQLKIATFNLFNYLEPPNAYYEFEKIYTAQQWAKKQQWIIDYL 60 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 D++ QE+ S ++ ++ + ++ AIA + V Sbjct: 61 TEHAPDVIGFQEVFSIESLQELVRGQGYE-HFAVVDTPEVIDDFIYKRPVVAIAAKYPIV 119 Query: 122 RVLQQSYP---LLGAKDSFSRAGNRRAVELLVE---INGKKIWVLDIHLKSFCFLDSLEN 175 V + + S +R+ + V I +V+ K N Sbjct: 120 EVAAVQHDNELVATLGLSADFTFSRKVLRATVTLPHIGNTDCYVVHFKSKRPMIEVDEHN 179 Query: 176 TYSPSCSLLSQQAQW-------------------LKDWITQKKESLVPFVIAGDFNRKIN 216 + + + + I +++ + P ++ GDFN I Sbjct: 180 KALSPEKNIIEILKANVAGGWGSTIQRGSEATLLMIQMIARREATQQPMILMGDFNNSIA 239 Query: 217 YLGNNDDFWKTID----------------------------------------------- 229 + T+ Sbjct: 240 DGVLSHMLTNTLRFAPAFDAKTYLAKYCLNDAWDLFTKSQLASAESQAPTDDLRVDGHIA 299 Query: 230 ----PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD- 284 K R + + +DY ++ F YN D Sbjct: 300 SVVIEQGDANNVAKPATPRTPTHYYGASSSVLDYILLSSEFDASYHDSFFEVSDYNTYDR 359 Query: 285 -----IKSRGKRLSDHCPISIDYD 303 + R +DH + + Sbjct: 360 HLINPVFERDDLSTDHGVVIVSLT 383 >gi|315056461|ref|XP_003177605.1| glucose-repressible alcohol dehydrogenase transcriptional effector protein [Arthroderma gypseum CBS 118893] gi|311339451|gb|EFQ98653.1| glucose-repressible alcohol dehydrogenase transcriptional effector protein [Arthroderma gypseum CBS 118893] Length = 801 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 40/360 (11%), Positives = 92/360 (25%), Gaps = 78/360 (21%) Query: 22 QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 K ++++N + + + + LL + DADIV LQE+ + Sbjct: 416 DKFTVLTYNTLCDRYATHQQYGYAPSKALAWELRRDLLLSEIRGQDADIVCLQEVDQGSY 475 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAK- 134 + + + ++ + + A + +L+++ G Sbjct: 476 HGFFREQLAYNDYKGVYWPKGRAQGMNEEEAKVVDGCATFFKGSKFILLEKAMIHFGQTA 535 Query: 135 ----------DSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 D ++R + + ++V ++G++I V++ H+ ++ S Sbjct: 536 VRRPDAKGQDDIYNRLWQKDNIAVVVYLENRMSGERIIVVNAHIYWDPAYKDVKLVQSAI 595 Query: 181 CSLLSQQAQWLKDWITQKKESLV------------------------------------P 204 Q I + P Sbjct: 596 MMEEVTQLAEKFIKIPACTDKTAFRFSEPEDETNNNENASPPTPVEPSPSVEYSSPSQIP 655 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC---- 245 ++ GDFN + + + + + F + Sbjct: 656 TLVCGDFNSRPSSAVYNLLAHGRLEEEHPDLRNRLYGNLTRQGMTHPFTLKSAYSAIGEL 715 Query: 246 -NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY-NEDDIKSRGKRLSDHCPISIDYD 303 N IDY N + + Y SDH + ++ Sbjct: 716 SFTNYTPGFTDVIDYIWYSSNLLQVTGLLGEVDKEYLQRVPGFPNYHFPSDHLALMAEFS 775 >gi|294794491|ref|ZP_06759627.1| exodeoxyribonuclease III [Veillonella sp. 3_1_44] gi|294454821|gb|EFG23194.1| exodeoxyribonuclease III [Veillonella sp. 3_1_44] Length = 251 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 73/304 (24%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L ++ LDADI LQE Sbjct: 1 MKLISWNVNGLRAAVTKGFMES---------------FNELDADIFCLQETKLQPD-QIS 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++++ + + AV + + + + D R Sbjct: 45 LELPGYEQYWNSAVKKGY----------SGTAVFTRIKPLSVTNGIGIEEHDQEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ +++ + + + + L + Sbjct: 91 -----VITAEYDNFYLVCCYTPNSQRELARLDYRMTWEDAFRNYLLEL--------DKKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + F Sbjct: 138 PVILCGDLNVAHQEIDLKNPKMNRKNAGFSDEERAKMTELLGAGFTDTFRHLYPDAIEQY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ + + + + ++ SDHCP+ Sbjct: 198 SWWSYMGKARERNTGWRIDYFITSKRLDDKIQEAKIHQQIF-----------GSDHCPVE 246 Query: 300 IDYD 303 + D Sbjct: 247 LVID 250 >gi|271500992|ref|YP_003334017.1| endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech586] gi|270344547|gb|ACZ77312.1| Endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech586] Length = 256 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 36/293 (12%), Positives = 81/293 (27%), Gaps = 49/293 (16%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++ N + S LR +++ ADIV LQE+ Sbjct: 5 SQSPLGISFTVLTINTH----------KGFSALNRRFILPELRDAVRSVSADIVCLQEVL 54 Query: 76 SYNAVAKV----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYP 129 ++ + +P F + +++ + AV ++ Sbjct: 55 GRHSTHPLQVEHWPDTPHYEFLAETMWNDYAYGRNAIYPEGDHGNAVLSHFPIFSYRNLD 114 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + S S R + ++++ + + + + + S QQ Sbjct: 115 V-----SVSDKAKRGILHCVLKVPNRDVHIHVVCVHLGLT-----------ASHRRQQLS 158 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L D + + P ++AGDFN F + Sbjct: 159 LLCDLLAT-LPADAPLIVAGDFNDWQM-----KASAILKRRAGLEEVFSQHFGKPPRTFP 212 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + LSDH P++++ Sbjct: 213 ARFPLLRLDRIYVRNAK-----------TSVPKLLPSKPWAHLSDHAPLAVEI 254 >gi|218130897|ref|ZP_03459701.1| hypothetical protein BACEGG_02492 [Bacteroides eggerthii DSM 20697] gi|217987241|gb|EEC53572.1| hypothetical protein BACEGG_02492 [Bacteroides eggerthii DSM 20697] Length = 254 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 33/302 (10%), Positives = 85/302 (28%), Gaps = 73/302 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+N L + L ++ N D++ LQE Sbjct: 1 MKIITYNVNGLRA---------------AVTKGLPEWLANEQPDVLCLQETK-------- 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + H + ++ +A+ K + G + R Sbjct: 38 LQPEQYPAEALDALGYKHYLYSARKKGYSGVAILTKREP----DHVEYGMGMEEYDSEGR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + ++ ++ S D + + + + ++ + + + Sbjct: 94 F-----MRADYGDLSIVSVYHPSGTSGDERQ-------AFKMVWLEKFRQYVVELQRTRP 141 Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GD+N + +D W T N+ I + Sbjct: 142 KLILCGDYNICHEAIDIHDPVRNATNSGFLPEEREWMTRFLNEGFIDTFRLLHPDKQEYT 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY ++++ L + SDHCP+ + Sbjct: 202 WWSYRFNSRAKNKGWRIDYCMVNEPVRPMLKDARILNDAVH-----------SDHCPMML 250 Query: 301 DY 302 + Sbjct: 251 EI 252 >gi|120612934|ref|YP_972612.1| endonuclease/exonuclease/phosphatase [Acidovorax citrulli AAC00-1] gi|120591398|gb|ABM34838.1| Endonuclease/exonuclease/phosphatase [Acidovorax citrulli AAC00-1] Length = 259 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 83/291 (28%), Gaps = 49/291 (16%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + ++++ N++ LR+ + + ADIVFLQE+ Sbjct: 10 SPAPIAFKVLTVNVHKGFTSFNRRFM----------LHELREAVRGVSADIVFLQEVLGT 59 Query: 78 NAVA----KVFPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + FP+ F + ++ ++ H A+ K V +++ + Sbjct: 60 HQRHANRVANFPQEPHYEFLADTIWGQYAYGRNAVYDNGHHGNALLSKFPIVHYENHDIS 119 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + R + +++ G V I + + +Q + + Sbjct: 120 VSG-----PERRGMLHCVLQPPGHDRQVHAICVHLGL-----------QEAHRQRQLRRV 163 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 D + P ++AGDFN F Sbjct: 164 CDLVNTF-PGDDPVIVAGDFNDWRGRAHE-----VLRKGAGLHEVFVHAGGRAVRTFPAS 217 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + + +LSDH P++ + Sbjct: 218 MPLLALDRIYVRNAS-----------VHAPVVLPRKPWHKLSDHAPLAAEI 257 >gi|20808602|ref|NP_623773.1| exonuclease III [Thermoanaerobacter tengcongensis MB4] gi|20517232|gb|AAM25377.1| Exonuclease III [Thermoanaerobacter tengcongensis MB4] Length = 258 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 81/301 (26%), Gaps = 75/301 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N L Y K +DADI +QE + Sbjct: 1 MKLVSWNVNGLRACLQKGFM---------------DYFKAIDADIFCIQETKLQENQKDI 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + ++ AV K + D R Sbjct: 46 EGLDLNGYYAFWN--------FAEKKGYSGTAVFTKYKPLSVSYGIGTPHHDKEGR---- 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + KK ++++ + + + N L +S+ Sbjct: 94 -----VITLEYKKFFLVNAYTPNSQRGLTRLNYRMEWEEDFRSYLLKL--------DSVK 140 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F + +A Sbjct: 141 PVILCGDLNVAHQEIDIKNPAANRRNAGFTDEEREKMTILLNSGFIDTFRYFYPDKKDAY 200 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 +DYF++ + +LI + SDHCP+ Sbjct: 201 TWWSYMHNAREKNIGWRVDYFIVSERLKDYLIDSQIHSEV-----------MGSDHCPVV 249 Query: 300 I 300 + Sbjct: 250 L 250 >gi|330986335|gb|EGH84438.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 233 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 78/256 (30%), Gaps = 41/256 (16%) Query: 54 YTLLRQYAKNLDADIVFLQEM----GSYNAVAKVFPKNTWCIFYSTERLIN--HSKRDSN 107 LR+ + + ADIVFLQE+ S+ K +P + F + + + + Sbjct: 12 LPELREAVRTVSADIVFLQEVHGEHQSHARSVKDWPTISQYEFLADSMWNDFAYGRNAVY 71 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 D A+ K + ++ + S R + ++E+ V + + Sbjct: 72 PDGDHGNALLSKYPIIQHENLDI-----SIHGTEQRGLLHCILEVPYAG-RVHAVCVHLG 125 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 S QQ L + + + P ++AGDFN Sbjct: 126 LR-----------ESHRRQQLNLLAELMER-LPEGEPVIVAGDFNDWRQRAD------AL 167 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 ++ F + + + + +D + S Sbjct: 168 LEGTGLHEVFVERFGAPAKSFPARWPLLRLDRIYVRNATSHRPKVLS-----------SR 216 Query: 288 RGKRLSDHCPISIDYD 303 LSDH P++++ Sbjct: 217 PWSHLSDHAPLAVELT 232 >gi|297680661|ref|XP_002818101.1| PREDICTED: endonuclease/exonuclease/phosphatase family domain-containing protein 1-like isoform 1 [Pongo abelii] gi|297680663|ref|XP_002818102.1| PREDICTED: endonuclease/exonuclease/phosphatase family domain-containing protein 1-like isoform 2 [Pongo abelii] Length = 569 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 36/296 (12%), Positives = 78/296 (26%), Gaps = 35/296 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+ S V N R TLL K ++ +QE+ A+ K Sbjct: 261 LRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 311 Query: 84 FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKK-NVRVLQQSYPL 130 + + + + V + Sbjct: 312 CTELNQPTLPNIRKWKGPRGCWKAVVAEKPSNQLQKGAGYAGFLWDAAAGVELRDAGSQE 371 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + + ++ + ++++HL + L S + + S Sbjct: 372 SSPSNGHGKLAGPSPYLARFKVGSHDLTLVNLHLAALTLLGSENPSKNHSDGHR---LAS 428 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + + + +I GDF + + + I + + KN Sbjct: 429 FAQTLQETLKGEKDVIILGDFGQGPDSNDYD------ILRKEKFHHLIPAHTFTNISTKN 482 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302 + +D + ++ K I S+HCP+ + Sbjct: 483 PQGSKSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEL 538 >gi|329937752|ref|ZP_08287271.1| secreted protein [Streptomyces griseoaurantiacus M045] gi|329303151|gb|EGG47039.1| secreted protein [Streptomyces griseoaurantiacus M045] Length = 285 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 34/285 (11%), Positives = 72/285 (25%), Gaps = 61/285 (21%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-----MGSYNA 79 R+++WN+ + L +V LQE + Sbjct: 47 RVMTWNLCNPCKSGDAD---------------LAAEIAASAPQVVGLQESCTGQVERIRT 91 Query: 80 VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + + + + + A+ + Sbjct: 92 LLRNRHGLDYHVEYGTVLHRWGRCGGAPWKPGGYGEAILSAAPMTDAVAVEYPDGG---- 147 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + +R + + + G+++ V + HL S+ ++Q L + + Sbjct: 148 -SEDRGYMAVTTTVGGRELRVFNTHL-----------AERRQESVRAKQVDVLAKVVARY 195 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + V+ GDFN Y D W + D C + D Sbjct: 196 DRA----VVMGDFNAVP-YAAELDAMWPLVKDADPRCGPS--AGGACEPTTDWH--SRFD 246 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 Y + + S + + SDH + D Sbjct: 247 YVFLRG------VGASGHRVRASTH---------SDHHMLYADLT 276 >gi|24372731|ref|NP_716773.1| hypothetical protein SO_1148 [Shewanella oneidensis MR-1] gi|24346800|gb|AAN54218.1|AE015559_2 hypothetical protein SO_1148 [Shewanella oneidensis MR-1] Length = 377 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 39/356 (10%), Positives = 86/356 (24%), Gaps = 78/356 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +R+ + N+ E S + + DIV QE+ S + Sbjct: 19 IRIATINLFNFIEPPLAFYDFENIYSHGQWQKKCQWFGELLNQYHPDIVGFQEVFSPEPL 78 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV---LQQSYPLLGAKDSF 137 ++ + ++ A+A R + V +++ + S Sbjct: 79 KQLTAQQG-LTHFAIVDSATLVSDYIYQSPVVALASRFPILDVHAIEPEAHLVAAMGLSS 137 Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFL-------------------------- 170 + +R+ + V+I +H KS Sbjct: 138 QFSFSRKVLRATVDIPQIGACDCYVVHFKSKRPGLALEPHPLGLTLSAPPTLALHSETKL 197 Query: 171 -DSLENTYSPSCSLLSQQAQWL-KDWITQKKESLVPFVIAGDFNRK-------------- 214 S +A L + +++ P ++ GDFN Sbjct: 198 LTEQALGRWASTMQRGAEAALLFHAILARRQSRRYPVILMGDFNDSLSMGALDALTLEGE 257 Query: 215 -INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN---------------------ANKNLR 252 ++ + L F + + + Sbjct: 258 HLHSKDIKAAGLGHLSDAARLAVFAQYRLQDAYELFVAANMPDNLVHSREHRAATHYYGP 317 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKRLSDHCPISIDY 302 +DY ++ + + Y D R +DH P+ ++ Sbjct: 318 KGSVLDYILLSNEFDASDSRSLAQVVDYQTCDRHLVRPEYERDAYSTDHAPVWVEL 373 >gi|313667587|ref|YP_004047871.1| nuclease [Neisseria lactamica ST-640] gi|313005049|emb|CBN86481.1| putative nuclease [Neisseria lactamica 020-06] Length = 259 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 33/307 (10%), Positives = 79/307 (25%), Gaps = 78/307 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81 ++++S N+N + + +Y ADIV +QE+ + A Sbjct: 2 LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSE 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + ++ +S +G Sbjct: 47 EMKNPHGMHGYWHCAEKRGYSGVAVYGKRKPDNV--------------QIGMGIEEFDRE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R V + ++ V+ ++L S + + + + + K Sbjct: 93 GRF-----VRCDFGRLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLETMKNE 140 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCN 246 V+ GD+N + + + + Sbjct: 141 GRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHTLGWTDMWRTLYPDNP 200 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY ++ + + ++ SDH P Sbjct: 201 GYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAP 249 Query: 298 ISIDYDF 304 + ++YD+ Sbjct: 250 LVVEYDY 256 >gi|312144054|ref|YP_003995500.1| exodeoxyribonuclease III Xth [Halanaerobium sp. 'sapolanicus'] gi|311904705|gb|ADQ15146.1| exodeoxyribonuclease III Xth [Halanaerobium sp. 'sapolanicus'] Length = 254 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 35/307 (11%), Positives = 87/307 (28%), Gaps = 79/307 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 +R+ SWN+N + + + D++ LQE+ Sbjct: 1 MRIYSWNVNGIRAVNRKGF---------------LDWIEEEKPDVLALQEIRIQPEQLKD 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K+ + + +++ + + +A+ K + + D R Sbjct: 46 KLKNIDGYHSYFNYGEKAGY----------SGVAIYSKEEPLDVWKGFGIERFDYEGR-- 93 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 ++ + ++L+I+ + N + A+ L++ Sbjct: 94 -------VIAAEYPEFYLLNIYFPNGKSSKERLNYKLDFYDATLEYAEELRE-------E 139 Query: 202 LVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 V++GD+N + +L ++ ++ + + + + Sbjct: 140 GKGVVVSGDYNTAHHPLDLKNPDANKNTSGFLEIEREWLDKLENHGFIDTYRYFYPDKE- 198 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDY + + L SDHCP Sbjct: 199 TYSWWSYRTRARERNAGWRIDYHFISEELEDNLNHSDILT-----------DVMGSDHCP 247 Query: 298 ISIDYDF 304 +++D F Sbjct: 248 VTVDLKF 254 >gi|51556247|ref|NP_991322.1| endonuclease/exonuclease/phosphatase family domain-containing protein 1 [Danio rerio] gi|82187405|sp|Q6TEQ0|EEPD1_DANRE RecName: Full=Endonuclease/exonuclease/phosphatase family domain-containing protein 1 gi|37682097|gb|AAQ97975.1| KIAA1706-like protein [Danio rerio] Length = 550 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 32/316 (10%), Positives = 87/316 (27%), Gaps = 41/316 (12%) Query: 9 LVFFLVPCTASVAQK------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 LV + PC A VR+ +WN+ + ++ Sbjct: 225 LVTSVRPCVEPPAGTRDGKPVVRVATWNLQ---------RCSSEKANNPGVKEVVCMTLL 275 Query: 63 NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN------------HSKRDSNNDI 110 D ++ +Q++ A+ K + S R + + ++ Sbjct: 276 ENDIKLLAVQDLADREALDKFCAELNQPTLCSVRRWKSARGLWKCAVSEKPNGVSNSAPE 335 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 + + ++ S L + + + + I ++ ++++ L + Sbjct: 336 FSGFLWDCSSGIEMKDSAVLESFTTNGNGNPHPQPYLGHFYIGSSELTLVNVLLTAAPSP 395 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 + + + L + + + ++ G F + + + Sbjct: 396 TENKRKSTSDDLKTHK----LSSGVQETLKGERDLLVMGHFGVAPDSSEMEILRKEKLSA 451 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI-QESFSEILYNEDDIKSRG 289 + F + + + +D ++ K Q S I Sbjct: 452 LLAPSVFTNI------STRTPQGSRSLDNIWASRSLRKTYTGQCSVVREGLTNPWIPDNW 505 Query: 290 KR---LSDHCPISIDY 302 S+HCP+ ++ Sbjct: 506 SWGGVASEHCPVVAEF 521 >gi|305680645|ref|ZP_07403453.1| putative exodeoxyribonuclease III [Corynebacterium matruchotii ATCC 14266] gi|305660176|gb|EFM49675.1| putative exodeoxyribonuclease III [Corynebacterium matruchotii ATCC 14266] Length = 298 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 79/304 (25%), Gaps = 67/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + LD D++ +QE K Sbjct: 1 MRIANWNVN----------------SVRTRVDRIVAALARLDIDVLLVQETKCK---DKQ 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + + +A+ + Q+ + + Sbjct: 42 FPFDAF---------PGYEIAHHGLNQWNGVAILSRVGLADIQTSFPHQPGFAKDPKKPQ 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK---- 199 + + + V +++ + + Y + L + + Sbjct: 93 NLEARAISADCGGVRVWSLYVPNGRAIADRHYDYK------LRWLDALARHVEDQAGDPE 146 Query: 200 -ESLVPFVIAGDFNRKINYLGNNDDFW---------KTIDPNDSLIRFPKEKDSRCNANK 249 S P V+ GDFN D LI S + Sbjct: 147 QPSSQPLVLGGDFNIAPTDANVWDITAFIDHTHVTEAERQAFAGLIEAGLTVTSPTSGYS 206 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 K + ID+ + D + G SDH P+ + Sbjct: 207 YWDYKAGRFPKNEGMLIDFQLARG----------LHATGSFIDVAERSGTGASDHAPVVV 256 Query: 301 DYDF 304 DYD+ Sbjct: 257 DYDY 260 >gi|163739851|ref|ZP_02147258.1| exodeoxyribonuclease III [Phaeobacter gallaeciensis BS107] gi|163743404|ref|ZP_02150784.1| exodeoxyribonuclease III, putative [Phaeobacter gallaeciensis 2.10] gi|161383398|gb|EDQ07787.1| exodeoxyribonuclease III, putative [Phaeobacter gallaeciensis 2.10] gi|161386885|gb|EDQ11247.1| exodeoxyribonuclease III [Phaeobacter gallaeciensis BS107] Length = 262 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 26/307 (8%), Positives = 66/307 (21%), Gaps = 73/307 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L +WNIN ++ + D++ LQE S Sbjct: 2 SFTLATWNIN----------------SVRLREPIVCKLLAEEGPDVLCLQECKSPVD--- 42 Query: 83 VFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 I + + + +A+ + + Sbjct: 43 -------KIPMEQFAELGYGHMVARGQKGYNGVAILSRLPIEDVGDKDFADLGHARH--- 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +E + + + ++ + D + + ++DW ++ Sbjct: 93 ----IAGRLENG---VTIHNFYVPAG--GDVPDRAVNEKFGQKLDYLTDMRDWFNAERPE 143 Query: 202 LVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCN 246 ++ GD N D + + + Sbjct: 144 KS--ILVGDLNIAPREDDVWDHKKLLKVVSHTPIEVEHFADVMDAGGWSDVTRNDIPDGQ 201 Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ + ++ SDH Sbjct: 202 LYSWWSYRAKDWDAADKGRRLDHIWATPDIKNAAHSS-------RVMRDARGWEKPSDHA 254 Query: 297 PISIDYD 303 P+ +D Sbjct: 255 PVFATFD 261 >gi|332525591|ref|ZP_08401746.1| hypothetical protein RBXJA2T_07110 [Rubrivivax benzoatilyticus JA2] gi|332109156|gb|EGJ10079.1| hypothetical protein RBXJA2T_07110 [Rubrivivax benzoatilyticus JA2] Length = 269 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 40/299 (13%), Positives = 84/299 (28%), Gaps = 51/299 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + A+ + +R+ ++NI+ + + + L ++ DAD+VFLQE Sbjct: 11 LMPPATGLEALRVATYNIH--------KGVRGVGRGKRLEIHNLGLAVESFDADMVFLQE 62 Query: 74 M------GSYNAVAKVFPKNTW---CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 + S F + + A+ + Sbjct: 63 VRLFNTRESRRFQRTSFGWPEQGQAEFLAPEGYDVAYRTNAITRHGEHGNALLSRWPIGD 122 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + + S R R + + V+ G + + H + Sbjct: 123 IGHHDV-----SDHRFEQRGLLHVPVQWQGMTVHAVVAHFGLVH-------------ASR 164 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 +Q L ++I ++AGDFN L + P+ + Sbjct: 165 LRQVARLAEFIDATVPPGEMLIVAGDFNDWGERLDSPMATI-----GLQRAFAPESTRQQ 219 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +L +D F + + + R+SDH P+ + + Sbjct: 220 RLTFPSLAPVFALDRFYLRG----------LRCVSTMVPRGMA-WARMSDHLPLVAELE 267 >gi|328874296|gb|EGG22662.1| hypothetical protein DFA_04792 [Dictyostelium fasciculatum] Length = 552 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 42/326 (12%), Positives = 88/326 (26%), Gaps = 70/326 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM------- 74 +L+++NI ++ L+ K+ D++ LQE+ Sbjct: 253 DTFKLMTYNIWNYNKP------------WRIRSKLITDIIKDHQPDVIALQELRYSKWDG 300 Query: 75 -----------GSYNAVAKVFPKNTWCIFYSTERLINH--SKRDSNNDIHTAIAVRKKNV 121 N + + ++ + + + + + K+ Sbjct: 301 EHYKESPKLMGQERNQIQHIVNLLSFHNLKYNYYYLPSMIYNNEVDGLQMEGLGILSKHP 360 Query: 122 RVLQQSYPLLGAK-DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 V +S L D + R + + I+G+ + VL H Sbjct: 361 IVKIESTKLTNDHIDDTTDTHQRSCLLATINIDGRHLNVLTSHFSLSFQGGQRN------ 414 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR---- 236 A + +W Q P ++ GDFN + N K +++ Sbjct: 415 -------AYEIHNWTKQY--DDAPNILVGDFNAEPNSHPIQFLTGKHSIKDNTGDFKDMY 465 Query: 237 ------FPKEKDSRCNANKNLRNKI------PIDYFVMDQNAYK------FLIQESFSEI 278 P R+ ID+ ++ Q++ L Sbjct: 466 DTYCQSNPDNSICTTKGGITYRDVGDVSIEKRIDFIMVKQSSKSTTTNQIELTNLESVGG 525 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 +D+ SDH + + F Sbjct: 526 QRFDDNGIPLSIFPSDHSGLVSTFKF 551 >gi|325660677|ref|ZP_08149307.1| exodeoxyribonuclease [Lachnospiraceae bacterium 4_1_37FAA] gi|325473038|gb|EGC76246.1| exodeoxyribonuclease [Lachnospiraceae bacterium 4_1_37FAA] Length = 250 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 76/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N + + K DADI +QE Sbjct: 1 MKFISWNVNGIRACVQKGF---------------LDFFKEADADIFCIQESKMQEG-QLK 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + F++ + ++ A+ K + G R Sbjct: 45 LELEGYHQFWN----------YAERKGYSGTAIFTKQEPLSV----AYGIGMEEHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++ + + ++ + + + + + + L+ Sbjct: 91 -----VITLEFEEFYFVTVYTPNSQNELARLDYRMQWETEFLKYLKKLEA--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + F + Sbjct: 138 PVIFCGDLNVAHREIDLKNPKTNRKNAGFTDEERGKFTELLSAGFIDTFRYFYPEQEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + L SDHCP+ Sbjct: 198 SWWSYRFSARAKNAGWRIDYFCVSECLKDRLRDAKILT-----------DVMGSDHCPVE 246 Query: 300 IDYD 303 +D++ Sbjct: 247 LDFE 250 >gi|168205412|ref|ZP_02631417.1| exodeoxyribonuclease III [Clostridium perfringens E str. JGS1987] gi|170663003|gb|EDT15686.1| exodeoxyribonuclease III [Clostridium perfringens E str. JGS1987] Length = 250 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 38/299 (12%), Positives = 74/299 (24%), Gaps = 78/299 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L Y K+ DADI LQE Sbjct: 1 MKLISWNVNGLRACVKKGF---------------LDYFKSEDADIFCLQETKLQEG-QID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + G R Sbjct: 45 LDLEGYHQYWNYAEKKGY----------SGTAIFTKKEPLNV----YYGINMEHHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + L S Sbjct: 91 -----VITLEFEDFFMVTVYTPNSQSELARLEYRMEWEDDFRNYLLEL--------SSKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GD N D + T+ + + F Sbjct: 138 GVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDKFSTLLSSGFIDTFRYFNPDLEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF++ N + + + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEAFIDTEIL-----------GSDHCPV 245 >gi|160945969|ref|ZP_02093195.1| hypothetical protein FAEPRAM212_03502 [Faecalibacterium prausnitzii M21/2] gi|158443700|gb|EDP20705.1| hypothetical protein FAEPRAM212_03502 [Faecalibacterium prausnitzii M21/2] gi|295103228|emb|CBL00772.1| exodeoxyribonuclease III [Faecalibacterium prausnitzii SL3/3] Length = 250 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 78/303 (25%), Gaps = 77/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + LDADI +QE A Sbjct: 1 MKLISWNVNGLRACLTHGF---------------AESFAALDADIFSVQETKMQPGQADF 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ YS E ++ A K + + L D R Sbjct: 46 APEGYTEYTYSAE-----------KKGYSGTACWCKTAPLAVTTGIGLEQHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 L +E G ++++ + + + L ++ Sbjct: 91 ---VLTLEYPG--FYLVNCYTPNSQDGLKRLDYRMEWEDAFRAYLLAL--------DAKK 137 Query: 204 PFVIAGDFNRKINYLGNNDD----FWKTIDPNDSLIRFPKEKDSRCNA----------NK 249 P ++ GD N + + + ++ Sbjct: 138 PVILCGDLNVAHTEMDIKNAKTNRMSAGFTDQERAKMTELLAAGFADSFRVVHPDEVKYS 197 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF++ + + ++ SDHCP+ + Sbjct: 198 WWSYRFHAREKNAGWRIDYFIVSRRIADRIRAAEIHNEIF-----------GSDHCPVEL 246 Query: 301 DYD 303 D Sbjct: 247 QID 249 >gi|149521136|ref|XP_001516262.1| PREDICTED: similar to APEX nuclease (multifunctional DNA repair enzyme) 1 [Ornithorhynchus anatinus] Length = 324 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 82/311 (26%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 ++ +++ SWN++ L + + DI+ LQE Sbjct: 59 SSSSGQPATLKICSWNVDGLRAWVKKKG---------------LDWVREEAPDILCLQET 103 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 A +K+ P+ + + + + ++ + + + + G Sbjct: 104 KC--AESKLPPELKDLSDFPHRYWAAPA----DKEGYSGVGLLSRRRPLSVS----YGIG 153 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R V + ++ +++ + + + Q Sbjct: 154 EEEHDQEGRVIVA-----EFEAFVLVTVYVPNSGRGLVRLDYRQRWDQAFRRFLQA---- 204 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 + + P V+ GD N + + F + + D F Sbjct: 205 ----QAARKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLGTVDLADSFR 260 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ + L Sbjct: 261 HLYPAAAYAYTFWTYMMNARSKNVGWRLDYFLLSRALLPSLCDSKIR-----------SA 309 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 310 ALGSDHCPITL 320 >gi|13473422|ref|NP_104989.1| hypothetical protein mlr4014 [Mesorhizobium loti MAFF303099] gi|14024171|dbj|BAB50775.1| mlr4014 [Mesorhizobium loti MAFF303099] Length = 289 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 84/312 (26%), Gaps = 57/312 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78 ++LV++NI +G D + + AD+V LQE+ N Sbjct: 1 MKLVTYNIQYGIGLDG-----------QYDVARIADAVR--GADVVALQEVTRNNPRNGG 47 Query: 79 ---AVAKVFPKNTWCIFYSTERLINHS-----KRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 + Y + N R + K L ++ L Sbjct: 48 RDMVAEIGEALPDYFAVYGSNFEANIGSRIENGRAITTTFQLGNMMLSKTPIHLSRNLLL 107 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 ++ R A+E L+E I IHL ++ LL+ + Sbjct: 108 PRSRSFEMMNFQRGALEALIETPLGFIRFYSIHLDHRSPVERASQIQFLRRRLLNYALEG 167 Query: 191 -----LKDWITQKKESLVPFVIAGDFNRKINYLG-------NNDDFWKTIDPNDSLIRFP 238 + + + FV GDFN + F + + ++ Sbjct: 168 GALSGVAEIGLPELPHPEAFVAMGDFNMLAGSPEYVELAGRPDHQFGMPLTADFAVDAAV 227 Query: 239 KEKDSRCNANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + + + K IDY + + L Sbjct: 228 RLNVTGDDLASWVDPKDPANTSRHKRIDYVFTSASPARSLQ-----------HLWVDHQA 276 Query: 291 RLSDHCPISIDY 302 SDH P+ + Sbjct: 277 TGSDHLPVWAEL 288 >gi|333026371|ref|ZP_08454435.1| putative exodeoxyribonuclease III [Streptomyces sp. Tu6071] gi|332746223|gb|EGJ76664.1| putative exodeoxyribonuclease III [Streptomyces sp. Tu6071] Length = 267 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 27/274 (9%), Positives = 74/274 (27%), Gaps = 58/274 (21%) Query: 59 QYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 ++ AD++ LQE+ ++ +V W ++ + + +++ Sbjct: 22 EWLAGTSADVLCLQEVRAEAHQLPEEVARPEGWFSLHAP----------AADKGRAGVSL 71 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + ++ D R + ++ G + V ++L S + Sbjct: 72 YTRREPDRVRTGFGSAEFDGSGR-------YVEADLPG--VTVASLYLPSGEVGTERQEQ 122 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGN 220 + L++ ++ GD+N Sbjct: 123 KYRFMDEFLTYLKELRERA---AAEGREVLVCGDWNIAHTEADLKNWRGNRKNAGFLPEE 179 Query: 221 NDDFWKTID--PNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKF 269 + + +D + + + IDY + Sbjct: 180 REWLSRVLDPADGGYVDVVRAQHAGVEGPYSWWSYRGRAFDNDTGWRIDYHMASAGLAGR 239 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + + +R SDH P+++ Y+ Sbjct: 240 ALKAEV-------ERAATHEERWSDHAPVTVTYE 266 >gi|241765944|ref|ZP_04763871.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN] gi|241364094|gb|EER59319.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN] Length = 255 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 89/294 (30%), Gaps = 49/294 (16%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 T S ++++ N++ LR+ + + AD+VFLQE+ Sbjct: 3 SSTHSAPIAFKVLTVNVHKGFTTFNRRF----------ILHELREAVRGVGADLVFLQEV 52 Query: 75 GSYNAVAKV----FPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 +A FP+ F + + + ++ A+ K +++ Sbjct: 53 LGTHARHASRVANFPQVPHYEFLADALWAQFAYGRNAVYDNGDHGNALLSKFPITHYENH 112 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + + R + +++ G + V I + S +Q Sbjct: 113 DISVSG-----PEARGMLHCVLQPPGHQRPVHAICVHLGLR-----------ESHRQRQL 156 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 Q + + + + P V+AGDFN N + F + Sbjct: 157 QCVCELV-HGLPADEPVVLAGDFNDW-----RNRAHGVLLRGAGLQEVFVQATGRPVRTF 210 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + A + K+ +LSDH P++ + Sbjct: 211 PAALPLLALDRIYVRNAAVHAPLALP-----------KTPWNKLSDHAPLAAEI 253 >gi|88859311|ref|ZP_01133951.1| hypothetical protein PTD2_20047 [Pseudoalteromonas tunicata D2] gi|88818328|gb|EAR28143.1| hypothetical protein PTD2_20047 [Pseudoalteromonas tunicata D2] Length = 330 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 49/328 (14%), Positives = 98/328 (29%), Gaps = 38/328 (11%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVF 70 + +S+ +R+ S N+ ++ + S ++ L K++ I+ Sbjct: 1 MTPPSSLQSSLRIASLNLYNFAKPPFSFYHPDEHYSAQQWQEKCLWLSSQLKHVQPAIIG 60 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQ---Q 126 QE+ S + +A++ F + + ++ A+A + Sbjct: 61 FQEVFSPDELARICQSCGLPFFSTVSNPVLAEDDPFLFIKPVVALASLYPIETITVLKPD 120 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLEN-------- 175 + L NR ++ + I +++ + K L S + Sbjct: 121 TQLLAAFNLPIDFQFNREPIKAKILIPVLGAATFYIVHLKSKRPTSLSSYTDVAFKEQPI 180 Query: 176 ----------TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 Y + A +D I + E +I GDFN +I G F Sbjct: 181 ASALLNATLGRYHSDMQRSLELALIYQDVIKSQTEGEHCTLIMGDFNDQITSDGLGFIFN 240 Query: 226 KTIDPNDSLIRFPKEKDS-------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 + I + DS R + +DY ++ S Sbjct: 241 QVISDGLAQTPSFGVTDSYQGSEQHRAGTHYYQNQGKVLDYILLSTPLLLPQSPFSVEFN 300 Query: 279 LYNEDDIKSRGKR---LSDHCPISIDYD 303 ++ + + G SDH I ID Sbjct: 301 AIDQHILNTSGLEQKLSSDHAFIYIDIT 328 >gi|84390811|ref|ZP_00991503.1| extracellular nuclease-related protein [Vibrio splendidus 12B01] gi|84376614|gb|EAP93491.1| extracellular nuclease-related protein [Vibrio splendidus 12B01] Length = 864 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 47/372 (12%), Positives = 102/372 (27%), Gaps = 91/372 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R + + LDADI+ L E Sbjct: 469 GDLRIATFNVLNYFNSPFGGDANQHGNNRGANTITEFEMQQEKIVNAILRLDADIIGLME 528 Query: 74 MGSY-----NAVAKVFPK---------NTWCIFYSTERLINHSKRDSNND---IHTAIAV 116 + + +A+ ++ + + + + + I T + Sbjct: 529 IENNGFGEGSAIHQLVNQLNDRIERKKDRYTFVAVDSNEDGVTDEMDSIGTDVITTGVIY 588 Query: 117 RKKNVRVLQQSY------------PLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDI 162 RKK V++ G + R ++ ++ G +K+ V Sbjct: 589 RKKVVKLKDSRVIAMPSQQAPEVLDDSGKVIEDGKNYQRDSLAPTFKVKGTKEKLTVAIN 648 Query: 163 HLKS--------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL------ 202 H KS + + A L + + K Sbjct: 649 HFKSKGSKCWEDAAPVEQGGQGGVDADKQGSCENFRVAAAVALGEALDGIKGHKVILGDM 708 Query: 203 ------VPFVIAGDF-------------NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 P ++ D+ N I+ + D I N I +K Sbjct: 709 NSYGMEDPMLVLTDYSEEKYGKQIKAARNTYIDGVEQFGDNGAVITKNYGYINAVAQKHP 768 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK------------- 290 + +D+ ++ + ++ + I E + + Sbjct: 769 DSWSYSYNDEVGALDHLLISDSLKDRVVDATDWHINGGESTLFDYNEEFKGDLPKYQDHF 828 Query: 291 RLSDHCPISIDY 302 R SDH P ++ Sbjct: 829 RSSDHDPAVLEL 840 >gi|255020178|ref|ZP_05292247.1| Exodeoxyribonuclease III [Acidithiobacillus caldus ATCC 51756] gi|254970320|gb|EET27813.1| Exodeoxyribonuclease III [Acidithiobacillus caldus ATCC 51756] Length = 258 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 34/299 (11%), Positives = 79/299 (26%), Gaps = 73/299 (24%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + SWN+N+L ++ + + D++ LQE + Sbjct: 3 ITSWNVNSL----------------KVRLPQVQTFLEKFQPDLLCLQETKLPDD------ 40 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 R ++ + +A+ + P G D + R Sbjct: 41 ----RFPTDHLREQGYAALYHGQSAYNGVAMLSRAPLAD----PECGFADGEAEPQARLC 92 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + V+++++ + LDS + + + L++++ Sbjct: 93 AATC-----ASVRVVNVYVPNGQALDSDKYAFK------LRWLAALREYLRDALARWPRL 141 Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 V+ GDFN ++ + + Sbjct: 142 VVLGDFNIAPGDGDVFDAAAWGEDILCSPAERAALTALEDLGFVDAYRALNPDG-REFTW 200 Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID ++ + + Q + +R SDH P+S+ Sbjct: 201 WDYRAASFRRNRGLRIDLILVSTALWPQVRQVLVH-------REERGAERPSDHAPVSL 252 >gi|218710781|ref|YP_002418402.1| hypothetical protein VS_2864 [Vibrio splendidus LGP32] gi|164562273|gb|ABY61048.1| hypothetical protein [Vibrio splendidus] gi|218323800|emb|CAV20157.1| Conserved hypothetical protein [Vibrio splendidus LGP32] Length = 867 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 47/372 (12%), Positives = 102/372 (27%), Gaps = 91/372 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R + + LDADI+ L E Sbjct: 472 GDLRIATFNVLNYFNSPFGGDANQHGNNRGANTITEFEMQQEKIVNAILRLDADIIGLME 531 Query: 74 MGSY-----NAVAKVFPK---------NTWCIFYSTERLINHSKRDSNND---IHTAIAV 116 + + +A+ ++ + + + + + I T + Sbjct: 532 IENNGFGEGSAIQQLVNQLNDRIERKKDRYTFVAVDSNEDGVTDEMDSIGTDVITTGVIY 591 Query: 117 RKKNVRVLQQSY------------PLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDI 162 RKK V++ G + R ++ ++ G +K+ V Sbjct: 592 RKKVVKLKDSRVIAMPSQQAPEVLDDSGKVIEDGKNYQRDSLAPTFKVKGTKEKLTVAIN 651 Query: 163 HLKS--------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL------ 202 H KS + + A L + + K Sbjct: 652 HFKSKGSKCWEDAAPVEQGGQGGVDADKQGSCENFRVAAAVALGEALDGIKGHKVILGDM 711 Query: 203 ------VPFVIAGDF-------------NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 P ++ D+ N I+ + D I N I +K Sbjct: 712 NSYGMEDPMLVLTDYSEEKYGKQIKAARNTYIDGVEQFGDNGAVITKNYGYINAVAQKHP 771 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK------------- 290 + +D+ ++ + ++ + I E + + Sbjct: 772 DSWSYSYNDEVGALDHLLISDSLKDMVVDATDWHINGGESKLLDYNEEFKGDLPKYQDHF 831 Query: 291 RLSDHCPISIDY 302 R SDH P ++ Sbjct: 832 RSSDHDPAVLEL 843 >gi|33519889|ref|NP_878721.1| exonuclease III [Candidatus Blochmannia floridanus] gi|33504234|emb|CAD83497.1| exodeoxyribonuclease III [Candidatus Blochmannia floridanus] Length = 267 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 77/310 (24%), Gaps = 74/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R VS+NIN L L L D++ LQE ++ + Sbjct: 1 MRFVSFNINGLRAH----------------MHQLDALITQLKPDVIGLQETKVHDDI--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A K + + + S R Sbjct: 42 -------FPVKIIEQYGYYVHFYGQKKYYGVAFLFKYPPITVTQGNVYDSLSSQKRT--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +++ + EN +S Q Q L+ +I + Sbjct: 92 --IIAQIVTKIGILTIINCYCP------QGENYHSNKFLFKRQFFQNLQHYIENTYNNQS 143 Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 +I GD N L + ++ + + K Sbjct: 144 ILLIMGDLNISPTDLDVGISEQNKKRWIKSGKCSFLPEERSWIHSLMKWGLIDIYRKNNP 203 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 K ID ++ Q I + S Sbjct: 204 YNNKRYSWFSYKYDGFHKNKGLRIDLILVTQPLENLYING-------DISYDIRGMPNSS 256 Query: 294 DHCPISIDYD 303 DH PI +D+D Sbjct: 257 DHAPIWVDFD 266 >gi|332667073|ref|YP_004449861.1| endonuclease/exonuclease/phosphatase [Haliscomenobacter hydrossis DSM 1100] gi|332335887|gb|AEE52988.1| Endonuclease/exonuclease/phosphatase [Haliscomenobacter hydrossis DSM 1100] Length = 352 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 39/342 (11%), Positives = 82/342 (23%), Gaps = 57/342 (16%) Query: 5 YVLALVFFL-VPCTASVAQKVRLV---SWNINTLSEQEGVSLWKN-----------SVKR 49 +L L+F V + R+ +N+ L + + + + + Sbjct: 10 IILVLIFCTGVNLAVFGQDRYRIAVIGFYNLENLFDTVNDTTINDEDFLPTGANLWTPDK 69 Query: 50 TTSDYTLLRQYAKNLD----AD---IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS 102 + + L D I+ + E+ + + + + + I H Sbjct: 70 YREKQGNMARVIAELGVEKTPDGVAILGVSEIENRKVLEDLVKEP---AIAARNYQIVHH 126 Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYP--LLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 I A+ K +V ++ + R R + + +G+ I V Sbjct: 127 DSPDERGIDVAMLYNPKYFKVTSSKMLPVIIYLDEQGDRQFTRDVLLVSGVFDGEPIHVF 186 Query: 161 DIHLKSFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 H S + + + S+ + L ++ F+I GD N Sbjct: 187 VNHWPSRRGGEKASEPWRVKAASVCKKACDSLLA-----QDPKAKFIIMGDLNDDPVNNS 241 Query: 220 NNDDFWK-----TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK------ 268 + + D F D ++ + Sbjct: 242 VKEVLRAKKEKEEVRKGDMFNPFYNLYKKGLGTLAYRDAWSLFDQIILSPAWVQPEVGGY 301 Query: 269 -------------FLIQESFSEILYNEDDIKSRGKRLSDHCP 297 F SDH P Sbjct: 302 QYFQANVHGPNYLRQQSGQFKGYPLRTYVGTEYRGGFSDHFP 343 >gi|332296037|ref|YP_004437960.1| exodeoxyribonuclease III Xth [Thermodesulfobium narugense DSM 14796] gi|332179140|gb|AEE14829.1| exodeoxyribonuclease III Xth [Thermodesulfobium narugense DSM 14796] Length = 254 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 86/302 (28%), Gaps = 73/302 (24%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + ++N+N R+ +D L + + +I+ LQE+ + Sbjct: 3 ITTFNVN--------------SIRSRTDIVNL--LIEKHNPEIIALQEIKCTPDLFPNLA 46 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + S + +AV K L S+ +D+ ++ + Sbjct: 47 FPDYKCLVS------------GEKSYNGVAVCTK----LDSSHFENEFQDTVNQKRS--- 87 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + + E +++I+ + + Y + L ++ + P Sbjct: 88 LFVKFEN----FILMNIYFPHGDLRGTDKFYYKLDF------YKKLLAFLKENFTPNDPI 137 Query: 206 VIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GDFN + + ++ + Sbjct: 138 IMLGDFNVALTDFDVYDPQILKDTIGTMPEERKALRELLNYGFIDTYRHLHPNDPGFTWF 197 Query: 250 -------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + IDY ++ + + + K R + SDH P+ ++ Sbjct: 198 NYIGGDIWKNKGMRIDYILVTKPLINKVKNVEV-----DLSLRKRRTPKPSDHAPLVMEI 252 Query: 303 DF 304 +F Sbjct: 253 NF 254 >gi|209966061|ref|YP_002298976.1| endonuclease [Rhodospirillum centenum SW] gi|209959527|gb|ACJ00164.1| endonuclease [Rhodospirillum centenum SW] Length = 266 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 32/310 (10%), Positives = 82/310 (26%), Gaps = 73/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE---MGSYNAV 80 +RL +WNIN++ + + L D+V LQE + + Sbjct: 1 MRLCTWNINSVRLRLPLLLRLL----------------DEHAPDVVCLQETKTVDDTFPL 44 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++ + +A+ + ++ G +D Sbjct: 45 RELA------------ERGYRFAHIHGMKSYNGVAILSRLELGAREVRHWCGREDCRH-- 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 G I + ++++ + D + + + Q + W +++ Sbjct: 91 ------IATTLPVGPGIELHNLYIPAG--GDVPDPAVNEKFAHKLQFLDEMIRWWPEQRS 142 Query: 201 SLVPFVIAGDFNRKI--NYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSR 244 P ++ GD N + ++ + + + Sbjct: 143 PDRPMILVGDLNIAPLETDVWSHRQLLDVVSHTPVEVEKLTQVQRTLGWVDAVRRFVPET 202 Query: 245 CNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + +D+ + L + + + + SD Sbjct: 203 EKLYTWWSYRSADWAASDRGRRLDHVWVTPPLAPALAGTTVLR------EARGWEPKPSD 256 Query: 295 HCPISIDYDF 304 H P+ +D+ F Sbjct: 257 HVPVLVDFRF 266 >gi|168002952|ref|XP_001754177.1| predicted protein [Physcomitrella patens subsp. patens] gi|162694731|gb|EDQ81078.1| predicted protein [Physcomitrella patens subsp. patens] Length = 331 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 39/328 (11%), Positives = 79/328 (24%), Gaps = 50/328 (15%) Query: 25 RLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 R+VS+NI + + + R + + + + DAD++ LQE+ Y + K Sbjct: 1 RIVSYNILAQSYVKGISFPHSPSPCLRWKNRSKAVLERLLSFDADVLCLQELDEYESYYK 60 Query: 83 V-FPKNTWCIFYSTERLINHSKRDSNND---------IHTAIAVRKKNVRVLQQSYPLLG 132 + + Y P Sbjct: 61 SRLTREGYSSVYIQRSGRKRDGCGIFFKRSRMELVEEQVVDFNDLVPPPTEDTPEVPSED 120 Query: 133 AKDSFSRAGN--------------------------RRAVELLVEINGKKIWVLDIHLKS 166 + S + A+ + G + + Sbjct: 121 DSQTGSDSVPVNNFKPEQSKKVRGDPNDPRVRLKRDCVAILAAFRMLGAPNKFMILGNTH 180 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI----------N 216 + + L Q + + K +S ++ GD+N + Sbjct: 181 LYWDPEWADVKLAQARYLLLQIVKFQQGLCSKLDSNPLLLVCGDYNSTPGDQVRLFLGSS 240 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ--ES 274 ++ P L + + + N N +DY I Sbjct: 241 ESNRGEEQLPERAPLPLLSLYEEALGAHPNTNVTPGFTGTLDYIFFRPTDSLRFINLLAL 300 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + SDH PI D+ Sbjct: 301 PTRDSPDLEGGLPNYSHPSDHLPIGADF 328 >gi|323340218|ref|ZP_08080482.1| exodeoxyribonuclease III [Lactobacillus ruminis ATCC 25644] gi|323092409|gb|EFZ35017.1| exodeoxyribonuclease III [Lactobacillus ruminis ATCC 25644] Length = 254 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 34/302 (11%), Positives = 73/302 (24%), Gaps = 78/302 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + VSWN+N L + + + LDAD +QE ++ Sbjct: 1 MNFVSWNVNGLRAVLKKNF---------------SEVFEKLDADFFCIQETKLQEGQVEL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K+ D R Sbjct: 46 -DLPGYHQYWN----------YAERKGYSGTAIFTKHEPQSVSYGIHNSEFDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ + + + L + Sbjct: 91 -----VITLEYASFYLVCCYSPNSQPKLKRLDFRMGFEDAFLNYLNDL--------KEKK 137 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + N L F Sbjct: 138 PVIMCGDLNVAHEEIDLKNPKTNHRNAGFSNEERSCMTRLLENGYLDTFRFFHPDETGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ ++ L SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFIVSESLKDSLENAEILT-----------DIMGSDHCPVL 246 Query: 300 ID 301 ++ Sbjct: 247 LE 248 >gi|289207222|ref|YP_003459288.1| endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix] gi|288942853|gb|ADC70552.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix] Length = 290 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 38/291 (13%), Positives = 87/291 (29%), Gaps = 55/291 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS-------DYTLLRQYAKNLDADIVFLQE 73 AQ++RL+S+N + + + + + + ++ D DIV +QE Sbjct: 33 AQRLRLLSFNAQVGIPSSRLHHYLTNSWKHVLPYKGRIGNLDRVARFIS--DFDIVGVQE 90 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + + + ++ + N R+ ++A+ + + + L G Sbjct: 91 LDGGSLRSNFVDLASYLSEKARFPHTYNRINRNLGQFAKHSLALFSRLEPERVEMHRLPG 150 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 R A+E + L + Q ++ Sbjct: 151 PLPGRGAIEARYAME------------------NGEELVLFLLHLALGRRARQAQLDYVA 192 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + I S V+ GD N + + L +T + Sbjct: 193 ERIQ----SERHAVVMGDLNCQQDSLEIRRLVARTGLLEPISCPAT---------YPSWD 239 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ D+ ++ + + D++ LSDH P+ I+ + Sbjct: 240 PRLVFDHILLTPDL--------------HVSDMRVYNVALSDHLPVGIEIE 276 >gi|257484686|ref|ZP_05638727.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|320323872|gb|EFW79956.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. glycinea str. B076] gi|320328009|gb|EFW84014.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 237 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 78/256 (30%), Gaps = 41/256 (16%) Query: 54 YTLLRQYAKNLDADIVFLQEM----GSYNAVAKVFPKNTWCIFYSTERLIN--HSKRDSN 107 LR+ + + ADIVFLQE+ S+ K +P + F + + + + Sbjct: 16 LPELREAVRTVSADIVFLQEVHGEHQSHARSVKDWPTISQYEFLADSMWNDFAYGRNAVY 75 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 D A+ K + ++ + S R + ++E+ V + + Sbjct: 76 PDGDHGNALLSKYPIIQHENLDI-----SIHGTEQRGLLHCILEVPYAG-RVHAVCVHLG 129 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 S QQ L + + + P ++AGDFN Sbjct: 130 LR-----------ESHRRQQLNLLAELMER-LPEGEPVIVAGDFNDWRQRAD------AL 171 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 ++ F + + + + +D + S Sbjct: 172 LEGTGLHEVFVERFGAPAKSFPARWPLLRLDRIYVRNATSHRPKVLS-----------SR 220 Query: 288 RGKRLSDHCPISIDYD 303 LSDH P++++ Sbjct: 221 PWSHLSDHAPLAVELT 236 >gi|291614973|ref|YP_003525130.1| endonuclease/exonuclease/phosphatase [Sideroxydans lithotrophicus ES-1] gi|291585085|gb|ADE12743.1| Endonuclease/exonuclease/phosphatase [Sideroxydans lithotrophicus ES-1] Length = 271 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 43/293 (14%), Positives = 88/293 (30%), Gaps = 53/293 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-AVAK 82 R++ +N+ G + D L ++ DADI+ LQE+ + Sbjct: 18 FRVMQFNMQF-----GQIWDEAEGDHAPIDLDLTIAEIQSHDADIIILQEVEHAQPGGVQ 72 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIH-----TAIAVRKKNVRVLQQSYPLLGAKDSF 137 + P + + R + D +A+ + L + F Sbjct: 73 LQPPPNYTRLKAAFRGYDSYFSYPKADPRELPFGIGLAIFSRTPLRDTFRMELPSSPVEF 132 Query: 138 SRAG------NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 G +R + ++G+++ + + HL ++ L+S + L+ +Q + Sbjct: 133 EFDGKKRTPTDRLLIGAKTTLDGQEVQLFNTHLLAYFMLNSSSEQHLQQRQLVVEQLR-- 190 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 +S P +I GDFN N D E Sbjct: 191 --------KSTGPTLIGGDFNV-----SNRDSLVHQFADAGYQPVQTTEV-------TWR 230 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +D+ + S + + SDH + +++F Sbjct: 231 YRPFVLDHIFHSPHLQ------SVRYTVKPT--------KASDHHILLAEFEF 269 >gi|51246268|ref|YP_066152.1| exodeoxyribonuclease (ExoA) [Desulfotalea psychrophila LSv54] gi|50877305|emb|CAG37145.1| probable exodeoxyribonuclease (ExoA) [Desulfotalea psychrophila LSv54] Length = 480 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 82/307 (26%), Gaps = 82/307 (26%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80 R +SWN+N + E + L+ D++ LQE Sbjct: 227 SYRYISWNVNGIRAVEKKGF---------------IDIVQELNPDVIGLQETKAQPEQLS 271 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + ++ + + + + +A K+ + + G Sbjct: 272 ESLKNIPGYTSYWYSAQRKGY----------SGVAFYSKHEPLQV----IYGIGAEEFDC 317 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + D +L + F +S + L + L + + ++ Sbjct: 318 EGRVI----------TLEFADHYLATIYFPNSADQLKRLDYKLRFN--RALLAFFQKLEK 365 Query: 201 SLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSR 244 ++ GDFN + ++ + + Sbjct: 366 EKA-VILCGDFNVAHKEIDLKNPKSNVKNAGFTPEERAWMDEFLEAG--YTDTFRLFNQD 422 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + IDYF + +N K ++ + SDH Sbjct: 423 PENYSWWSYRFSARSKNIGWRIDYFCVSENGQKRIVNAEILPEV-----------MGSDH 471 Query: 296 CPISIDY 302 CP+ +D+ Sbjct: 472 CPVLLDF 478 >gi|317476018|ref|ZP_07935271.1| endonuclease/Exonuclease/phosphatase [Bacteroides eggerthii 1_2_48FAA] gi|316907813|gb|EFV29514.1| endonuclease/Exonuclease/phosphatase [Bacteroides eggerthii 1_2_48FAA] Length = 371 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 37/322 (11%), Positives = 85/322 (26%), Gaps = 79/322 (24%) Query: 14 VPCTASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 VP TA + + + ++N++ + T + +Y + Sbjct: 98 VPATAPAPNREGKSGVCLTVATYNVHHFG-----------NEITGYSCKEIARYMQQRHV 146 Query: 67 DIVFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 D++ QE G +++ + + + + + +R Sbjct: 147 DVLCFQEFGDNPHFTTDSLRRALSHWPYALIPADDS------------------IRGILP 188 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE------- 174 + YPL G + + ++ + + + +L+ HL++ + Sbjct: 189 VAVFSRYPLAGGRFITYPRSSNCSMACDIVLGADTLRLLNNHLQTTSVSQNRRKWERELA 248 Query: 175 -NTYSPSCSLLSQQAQWLKD-----------WITQKKESLVPFVIAGDFNRKINYLGNND 222 N + A+ L + + S P ++ GDFN + Sbjct: 249 ANDTRREAQAVQDAAETLHENFVKRAAQTDSIVRLVIASPHPVLVCGDFNSLPSSYTYRQ 308 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 F + ++ + IDY Sbjct: 309 L------SGILQDGFKTGGHGYMYTYRYAKHMLRIDYAFHSSKLDC-------------T 349 Query: 283 DDIKSRGKRLSDHCPISIDYDF 304 D SDH P+ + Sbjct: 350 DYYSPDLDLCSDHNPVIFTVKY 371 >gi|302341817|ref|YP_003806346.1| endonuclease/exonuclease/phosphatase [Desulfarculus baarsii DSM 2075] gi|301638430|gb|ADK83752.1| Endonuclease/exonuclease/phosphatase [Desulfarculus baarsii DSM 2075] Length = 345 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 41/327 (12%), Positives = 90/327 (27%), Gaps = 62/327 (18%) Query: 14 VPCTASV----AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 +P A+ Q++ +VS+NI S S + ++ L D + Sbjct: 39 LPSVAATEFRPGQELVVVSYNIGYFSGMTNNLPVARSRELYAANLARAVAALGPLRPDAL 98 Query: 70 FLQEMG-------SYNAVAKVFPKN---------TWCIFYSTERLINHSKRDSNNDIHTA 113 LQE+ + + W Y A Sbjct: 99 ALQEVDFAASRSFDQDQAVLLAQGLGLGWLTKAVGWDKKYVPYPYWPPQHHFGRVVSGQA 158 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRA--GNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 + R + + + G + A +R +E+ G+++W+ +HL+++ Sbjct: 159 LLARYPLADLERHALAPRGDTPFYYNALYMDRLVQTAALELGGRRVWLACLHLEAWDRPT 218 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF------- 224 QA + + P ++ GDFN + F Sbjct: 219 RERQAR---------QAAAILARLR----ERGPLIVMGDFNTTPTWARVQTGFVDEPEQD 265 Query: 225 ---------WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + ++ + ++ R +D+ D + + + Sbjct: 266 FRGEATLAAMTALSLREAFDQGGSADEAATLTFPADRPSRKLDHIFYDPTRLELVWRRVV 325 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P++ + Sbjct: 326 V-----------EAGQASDHLPVAAAF 341 >gi|224537589|ref|ZP_03678128.1| hypothetical protein BACCELL_02469 [Bacteroides cellulosilyticus DSM 14838] gi|224520786|gb|EEF89891.1| hypothetical protein BACCELL_02469 [Bacteroides cellulosilyticus DSM 14838] Length = 370 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 44/295 (14%), Positives = 83/295 (28%), Gaps = 48/295 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++S+NI L+ Y KN ADI+ LQE + + Sbjct: 102 NSFKVLSYNIMGFDGAVKKDGEN-----------LILNYLKNSGADILCLQEYQTIESPR 150 Query: 82 KVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + K+ R S IA K + ++ + Sbjct: 151 YLSQKDVEKALKDYPYHNIQIVGRGSGKGHTNRIACYSKFPILSSRTLDYASEYNGSVVY 210 Query: 141 GNRRAVELLVEING---------KKIWVLDIHLKSFCFLDSLENTY------SPSCSLLS 185 + + ++ IN + V + LKS + + ++ + Sbjct: 211 ELKMGEDTVMLINNHLESNKLTKEDKVVYESMLKSPETEKVKSGARLLIRKLAEASAIRA 270 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 QA + I + ++ GDFN + K ++ F K Sbjct: 271 PQADSIAQEIAASRYP--YIIVCGDFNDTPISYA-HRVIEKGLND-----AFTKSGRGLG 322 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + ID + +N + + R + SDH PI Sbjct: 323 ISYNQNKFYFRIDNILASKNLKPY-------------NCTVDRSIKESDHYPIWC 364 >gi|323508160|emb|CBQ68031.1| related to APN2-AP endonuclease, exonuclease III homolog [Sporisorium reilianum] Length = 737 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 48/321 (14%), Positives = 89/321 (27%), Gaps = 61/321 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ WNIN L +G W ++L ADI QE M Sbjct: 1 MRITVWNINGLRTLKGYQPWYKLPDWE--------ACLEHLGADIACFQETKMTRKQLTE 52 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR------KKNVRVLQQSYPL-LGAK 134 + ++ F++ +S + +I ++ + + PL Sbjct: 53 PMCILPSYNAFFNFHPAKGYSGTVTYVKKSVSIPLKAEQGITGRLPVTNVSTNPLIPSEP 112 Query: 135 DSFSRAGNRRAVELLVE---INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 A R VE + + + VLD+ L + T Q L Sbjct: 113 IGCIPADTRDDVEPQIWNALDDEGRCVVLDLGLFVLFNVYCPNETGPERLEYKMTYYQGL 172 Query: 192 KDWITQKKESLVPFVIAGDFN--------------------RKINYLGNNDDFWKTIDPN 231 + + ++ +I GD N + F + P+ Sbjct: 173 AERAHRLIQAGRQVMIVGDMNIIRDPIDHCDAEQSMKEYGWDHFHQHPARSWFQTFLAPH 232 Query: 232 DSLIRFPKEKDS------RCNAN----KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + C + + +DY ++ + ++ +Y Sbjct: 233 GKFHDVGRLYHPERKKMFTCWNTLIDARPANYGVRLDYTLVTEGLLDWIKGADIQPDVY- 291 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 SDHCPI +D Sbjct: 292 ----------GSDHCPIYVDL 302 >gi|221330655|ref|NP_001137776.1| recombination repair protein 1, isoform B [Drosophila melanogaster] gi|220901923|gb|ACL82983.1| recombination repair protein 1, isoform B [Drosophila melanogaster] Length = 706 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 75/303 (24%), Gaps = 80/303 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +++ SWN+ L Q + DI LQE + Sbjct: 454 LKICSWNVAGLRAWLKKDG---------------LQLIDLEEPDIFCLQETKCANDQLPE 498 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +V + ++ + +A+ K + + + D R Sbjct: 499 EVTRLPGYHPYWLCMP-----------GGYAGVAIYSKIMPIHVEYGIGNEEFDDVGRM- 546 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +K +++++++ + L + L Sbjct: 547 --------ITAEYEKFYLINVYVPNSGRKLVNLEPRMRWEKLFQAYVKKLDAL------- 591 Query: 202 LVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P VI GD N + D + + F R Sbjct: 592 -KPVVICGDMNVSHMPIDLENPKNNTKNAGFTQEERDKMTELLGLGFVDTFRHLYPDRKG 650 Query: 247 ANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 A +DY ++ + +++ SDHCP Sbjct: 651 AYTFWTYMANARARNVGWRLDYCLVSERFVPKVVEHEIRSQCL-----------GSDHCP 699 Query: 298 ISI 300 I+I Sbjct: 700 ITI 702 >gi|218264874|ref|ZP_03478549.1| hypothetical protein PRABACTJOHN_04259 [Parabacteroides johnsonii DSM 18315] gi|218221713|gb|EEC94363.1| hypothetical protein PRABACTJOHN_04259 [Parabacteroides johnsonii DSM 18315] Length = 297 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 36/318 (11%), Positives = 90/318 (28%), Gaps = 39/318 (12%) Query: 1 MIRKYVLALVFF--LVPCT----ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54 M R ++L + F L+P T + +K+R++S+NI E + Sbjct: 1 MKRLHILYTLLFIWLLPVTSNGQPAGKEKLRVISYNIWNGFEHDAS------------RR 48 Query: 55 TLLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 + K DI+ + E+ + + ++ + + + SN I Sbjct: 49 ANFINWIKGQQPDILAMTELVGFTEKDLGQLASEYGHKYYAIVKEEGYPVGITSNEPITV 108 Query: 113 ------AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL--VEINGKKIWVLDIHL 164 +V+ + + + A L ++ N ++ Sbjct: 109 VKKQMEGFWHGMLHVKTHGLDMIVTHLSPHDWKFRLKEAQMLTSYIQDNQLDNCMVMGDF 168 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 ++ D+ Q+ ++ ++ + + F I + Sbjct: 169 NAYSPFDADWVETHAQLIENMQKWDAEQETYRNMRDGRFDYSVLSKF-LSIGLTDICRLY 227 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + + + +DY ++ + + Sbjct: 228 VPA--DKRTTFPAAFLYGWQHGDTRLHGIGERLDYILVSPSLVSRCLDARIHN------- 278 Query: 285 IKSRGKRLSDHCPISIDY 302 + +SDH P+S+D Sbjct: 279 -GIDTEGISDHYPVSVDL 295 >gi|17136678|ref|NP_476841.1| recombination repair protein 1, isoform A [Drosophila melanogaster] gi|150421656|sp|P27864|RRP1_DROME RecName: Full=Recombination repair protein 1; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase gi|7295875|gb|AAF51175.1| recombination repair protein 1, isoform A [Drosophila melanogaster] gi|21428628|gb|AAM49974.1| LP05366p [Drosophila melanogaster] Length = 679 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 75/303 (24%), Gaps = 80/303 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +++ SWN+ L Q + DI LQE + Sbjct: 427 LKICSWNVAGLRAWLKKDG---------------LQLIDLEEPDIFCLQETKCANDQLPE 471 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +V + ++ + +A+ K + + + D R Sbjct: 472 EVTRLPGYHPYWLCMP-----------GGYAGVAIYSKIMPIHVEYGIGNEEFDDVGRM- 519 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +K +++++++ + L + L Sbjct: 520 --------ITAEYEKFYLINVYVPNSGRKLVNLEPRMRWEKLFQAYVKKLDAL------- 564 Query: 202 LVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P VI GD N + D + + F R Sbjct: 565 -KPVVICGDMNVSHMPIDLENPKNNTKNAGFTQEERDKMTELLGLGFVDTFRHLYPDRKG 623 Query: 247 ANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 A +DY ++ + +++ SDHCP Sbjct: 624 AYTFWTYMANARARNVGWRLDYCLVSERFVPKVVEHEIRSQCL-----------GSDHCP 672 Query: 298 ISI 300 I+I Sbjct: 673 ITI 675 >gi|158340|gb|AAA62769.1| recombination repair protein [Drosophila melanogaster] gi|3342457|gb|AAC27621.1| recombination repair protein 1 [Drosophila melanogaster] Length = 679 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 75/303 (24%), Gaps = 80/303 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +++ SWN+ L Q + DI LQE + Sbjct: 427 LKICSWNVAGLRAWLKKDG---------------LQLIDLEEPDIFCLQETKCANDQLPE 471 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +V + ++ + +A+ K + + + D R Sbjct: 472 EVTRLPGYHPYWLCMP-----------GGYAGVAIYSKIMPIHVEYGIGNEEFDDVGRM- 519 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +K +++++++ + L + L Sbjct: 520 --------ITAEYEKFYLINVYVPNSGRKLVNLEPRMRWEKLFQAYVKKLDAL------- 564 Query: 202 LVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P VI GD N + D + + F R Sbjct: 565 -KPVVICGDMNVSHMPIDLENPKNNTKNAGFTQEERDKMTELLGLGFVDTFRHLYPDRKG 623 Query: 247 ANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 A +DY ++ + +++ SDHCP Sbjct: 624 AYTFWTYMANARARNVGWRLDYCLVSERFVPKVVEHEIRSQCL-----------GSDHCP 672 Query: 298 ISI 300 I+I Sbjct: 673 ITI 675 >gi|269964497|ref|ZP_06178738.1| extracellular nuclease-related protein [Vibrio alginolyticus 40B] gi|269830835|gb|EEZ85053.1| extracellular nuclease-related protein [Vibrio alginolyticus 40B] Length = 986 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 38/378 (10%), Positives = 93/378 (24%), Gaps = 96/378 (25%) Query: 16 CTASVAQKVRLVSWNINTLSEQ--EGVSLWKNSVKRTTSDYT-------LLRQYAKNLDA 66 A +R+ S+N+ + R ++ + +DA Sbjct: 469 APAIADSDLRIASFNVLNYFNSVADSGHENPTGQNRGATNLDEFLIQQAKIVAAMNKMDA 528 Query: 67 DIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIHT 112 DI+ L E+ + +A+ + ++ + E+ + ++ I Sbjct: 529 DIIGLMEVENNGFGDGSAIQNLVDALNAEIDDAEDHYTYVEIEEQDKYQDEYFGSDAIMV 588 Query: 113 AIAVRKK--------NVRVLQQSY--------PLLGAKDSFSRAGNRRAVELLVEIN--G 154 AI R V + + + + R ++ + G Sbjct: 589 AILYRANAVTPKDAAKVIITPEQHIAENTITRKEGTESNPAYDKYQRHSLLQTFTVKETG 648 Query: 155 KKIWVLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++ H KS + + A + + + + K Sbjct: 649 EDLSIVVNHFKSKGSECIEEWIAGVEDSEPADLQGNCNNFRVSAAHAVGEALKEVKGD-- 706 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPN-------------DSLI 235 ++ GD N + TI Sbjct: 707 -VLLMGDLNAYGMEDPLLTLTDYSKEKYGRDIYTAAYTTIGDGELQVEKTKIEKGYGLHN 765 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 + + +D+ + + + ++ I E ++ + Sbjct: 766 LNTLLHGTDTFSYTYSGELGNLDHALASSSLAQKVVAIEDWHINSLESNLFEYSSKYTGD 825 Query: 292 ---------LSDHCPISI 300 SDH P+ I Sbjct: 826 MPKYKDAFSASDHDPVII 843 >gi|257463916|ref|ZP_05628302.1| exodeoxyribonuclease III [Fusobacterium sp. D12] gi|317061443|ref|ZP_07925928.1| exodeoxyribonuclease III [Fusobacterium sp. D12] gi|313687119|gb|EFS23954.1| exodeoxyribonuclease III [Fusobacterium sp. D12] Length = 250 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 80/301 (26%), Gaps = 78/301 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + +Y + DADI LQE ++ Sbjct: 1 MKLISWNVNGIRACLKKGFM---------------EYFQAQDADIFCLQETKCSAGQVEL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + + D R Sbjct: 46 -DLKGYHQYWNYAEKKGY----------SGTAIFTKKEPLSVSYGLGIEEHDQEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + L + Sbjct: 91 -----VICLEFEDFYMVTVYTPNSKNELERLDYRMIWEDEFRNYLSKLNE--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + + F +A Sbjct: 138 PVVVCGDMNVAHEEIDLKNPKTNRRNAGFTDEERNKFTELLQAGFTDSFRYLYPDTLHAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + + + + + SDHCP++ Sbjct: 198 SWWSYRANARKNNTGWRIDYFVVSNDWKEQIQEAEIH-----------AEQEGSDHCPVA 246 Query: 300 I 300 + Sbjct: 247 L 247 >gi|119482243|ref|XP_001261150.1| endonuclease/exonuclease/phosphatase family protein [Neosartorya fischeri NRRL 181] gi|119409304|gb|EAW19253.1| endonuclease/exonuclease/phosphatase family protein [Neosartorya fischeri NRRL 181] Length = 300 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 84/306 (27%), Gaps = 31/306 (10%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + +R+++ NI + R L +N DA + LQE+ Sbjct: 3 TTTELPLRILTHNIRY-ATNSPFKGELPWDDRKQPLLNELLFNTRNQDA-FICLQEVLHN 60 Query: 78 NAVAKVFPKNT--------------WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 V + N W + + S ++ + V Sbjct: 61 QLVDVLSGLNQHSSTVSKGASETQQWEYNGVGRDDGHKAGEYSPIFYQPSVWQLRHWESV 120 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 P +K + A R + N + VL ++ D + + + Sbjct: 121 WLSETPNKPSK-GWDAASIRILTIGVFTHNITRHTVLAMNTHL---DDQGSRSRFEAAKI 176 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-PKEKD 242 + Q+ + + S+ ++AGDFN + + D+ P + Sbjct: 177 ILQKIDEYRS--GEFGTSIAGVLLAGDFNSQETQEAYSVLTGSESSLVDTAKAVEPSQHY 234 Query: 243 SRCNANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCP 297 IDY +M S+ Y + G LSDH Sbjct: 235 GDYYTWTGFGYEGEDPTRIDYILMGPG---KNKLGSWKVNGYAVLANRFDSGVYLSDHRA 291 Query: 298 ISIDYD 303 + D Sbjct: 292 VVADVT 297 >gi|330957166|gb|EGH57426.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 291 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 39/292 (13%), Positives = 80/292 (27%), Gaps = 58/292 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 ++RL+S+NI E + + + + D D+V L Sbjct: 30 PEDGRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHGGRAGNLQKIGDLIN--DFDLVAL 87 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE+ + + + R+ + V + + +PL Sbjct: 88 QEVDGGSMRSGFVNQVEHLAQLGGFPYWYQQLNRNLGRLAQHSNGVLSRLRPTKIEDHPL 147 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G R A+ + + V+ +HL + Q + Sbjct: 148 PGPAG-------RGAILVRFGEGEDALIVVMMHLALGT-------------RTRTLQLAY 187 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 +++ I V+ GD N N L + + + Sbjct: 188 IRELIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 233 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R K +D+ ++ +Q I SDH P++++ Sbjct: 234 WRPKRCLDHILLSPTLTLERVQVLAQPI--------------SDHLPVAVEI 271 >gi|329955159|ref|ZP_08296116.1| exodeoxyribonuclease III [Bacteroides clarus YIT 12056] gi|328526158|gb|EGF53177.1| exodeoxyribonuclease III [Bacteroides clarus YIT 12056] Length = 254 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 32/302 (10%), Positives = 82/302 (27%), Gaps = 73/302 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+N L ++ N D++ LQE Sbjct: 1 MKIITYNVNGLRAAVTKGFP---------------EWLANEQPDVLCLQETK-------- 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + H + ++ +A+ K + G R Sbjct: 38 LQPEQYPAEALDASGYKHYLYSARKKGYSGVAILTKREP----DHVEYGMGIEEYDNEGR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + ++ ++ S D + + + + ++ + + + Sbjct: 94 F-----IRADYGDLSIVSVYHPSGTSGDERQ-------AFKMVWLEKFQQYVVELQRTRP 141 Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GD+N + +D W T N I + Sbjct: 142 KLILCGDYNICHEAIDIHDPVRNATNSGFLPEEREWMTRFLNAGFIDTFRLLHPDKQEYT 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY ++++ L + + SDHCP+ + Sbjct: 202 WWSYRFNSRAKNKGWRIDYCMVNEPVRPMLKEARILNDAVH-----------SDHCPMML 250 Query: 301 DY 302 + Sbjct: 251 EI 252 >gi|325479466|gb|EGC82562.1| endonuclease/exonuclease/phosphatase family protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 349 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 103/320 (32%), Gaps = 60/320 (18%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 S+ + ++++WNI G + S + + + Q K+++AD Sbjct: 51 SIDNEYKIMTWNIGYGGLDKDTDFFMDGGKMVLPISKEHVENALDGILQSIKDINADFNL 110 Query: 71 LQEMGSYNAVAKVFPK---------------NTWCIFYSTERLINHSKRDSNNDIHTAIA 115 +QE+ + + + + Y + K +S T Sbjct: 111 IQEIDEDSKRTYNINEVEMFRENLLGNSIFAYNYKVKYVPYPIPPMGKMNSGILTQTKFK 170 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + QQ P + L +E KK+ ++++HL ++ ++ Sbjct: 171 I--SKAFRYQQPIPHKFPTRLANLKRGFDVSYLDIESTDKKLALINVHLDAYENGNNG-- 226 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 Q + + ++I + + ++ GDFN+++ + + +P+D Sbjct: 227 --------RIAQIKQIFEFIQNEYDMGNYVIVGGDFNQELRENYKAERISEYWNPSDFPH 278 Query: 236 RFPKEKDS-------------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 N N + ID F++ +N ++ Sbjct: 279 EIFPNDFKLVYGDNVNSSRLNNTPYNPNDSYECIIDGFIVSKNIEVEDVKVE-------- 330 Query: 283 DDIKSRGKRLSDHCPISIDY 302 G + SDH P+++ + Sbjct: 331 ----DLGFKNSDHNPVTMKF 346 >gi|318062091|ref|ZP_07980812.1| exodeoxyribonuclease III [Streptomyces sp. SA3_actG] gi|318079946|ref|ZP_07987278.1| exodeoxyribonuclease III [Streptomyces sp. SA3_actF] Length = 261 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 27/274 (9%), Positives = 74/274 (27%), Gaps = 58/274 (21%) Query: 59 QYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 ++ AD++ LQE+ ++ +V W ++ + + +++ Sbjct: 16 EWLAGTSADVLCLQEVRAEAHQLPEEVARPEGWFSLHAP----------AADKGRAGVSL 65 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + ++ D R + ++ G + V ++L S + Sbjct: 66 YTRREPDRVRTGFGSAEFDGSGR-------YVEADLPG--VTVASLYLPSGEVGTERQEQ 116 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGN 220 + L++ ++ GD+N Sbjct: 117 KYRFMDEFLTYLKELRERA---AAEGREVLVCGDWNIAHTEADLKNWRGNRKNAGFLPEE 173 Query: 221 NDDFWKTID--PNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKF 269 + + +D + + + IDY + Sbjct: 174 REWLSRVLDPADGGYVDVVRAQHAGVEGPYSWWSYRGRAFDNDTGWRIDYHMASAGLAGR 233 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + + +R SDH P+++ Y+ Sbjct: 234 ALKAEV-------ERAATHEERWSDHAPVTVTYE 260 >gi|312963318|ref|ZP_07777801.1| aminoacyl-tRNA hydrolase [Pseudomonas fluorescens WH6] gi|311282398|gb|EFQ60996.1| aminoacyl-tRNA hydrolase [Pseudomonas fluorescens WH6] Length = 258 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 44/298 (14%), Positives = 84/298 (28%), Gaps = 53/298 (17%) Query: 13 LVPCTASVA-QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 L+P + A + +++ NI+ LR+ +++ ADIVFL Sbjct: 6 LIPVAPTAAITRFTVLTVNIHKGFTALNRRF----------ILPELREAVRSVGADIVFL 55 Query: 72 QEM-----GSYNAVAKVFPKNTWCIFY-STERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 QE+ + + S + + A+ K V Sbjct: 56 QEIHGTHERHPQRYSDWPNMPQYEFLADSIWPQFAYGRNAVYPHGDHGNALLSKFQIVSY 115 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 + + + NR + ++ + G V I + Sbjct: 116 DNLDISQSGH-----ENRGLLHCVLRLPGTGQEVHAICMHLGLR-----------EVHRQ 159 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 QQ + L+ I + + P V+AGDFN + + F Sbjct: 160 QQLRLLEQRIRE-IPADAPLVVAGDFNDWRQRAD--------LSQSGLTEVFVHAHGKLA 210 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +D + L + LSDH P+S++ + Sbjct: 211 RTFPARLPLLALDRIYVRN-----LKVHHPRVLNT------RPWSHLSDHVPLSVEVE 257 >gi|295661161|ref|XP_002791136.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Paracoccidioides brasiliensis Pb01] gi|226281063|gb|EEH36629.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Paracoccidioides brasiliensis Pb01] Length = 769 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 39/360 (10%), Positives = 85/360 (23%), Gaps = 75/360 (20%) Query: 20 VAQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 +K +S+N + + + LL K +ADIV LQE+ Sbjct: 382 QNEKFTALSYNTLCDRSATHQQHGYAPSRALAWEYRRDLLLNEIKGYNADIVCLQEIDQG 441 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL- 131 + + + + ++ + K + + + Sbjct: 442 SYHGFFREQLAYNDYKGVYWPKGRAQGMPEEEAKVVDGCATFFKGSKYILLEKNMIHFGQ 501 Query: 132 ---------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYS 178 G D ++R + + ++ ++G+++ V+++HL ++ + Sbjct: 502 TAVRRPDAKGQDDIYNRLWQKDNIAVVTYLENRLSGERLIVVNVHLYWDPAYKDVKLIQA 561 Query: 179 PSCSLLSQQAQWLKDWITQKKESLV---------------------------------PF 205 Q I + P Sbjct: 562 AILMEEVTQLAEKYAKIPACIDKTAFRFSEPGNSTDGDGTATPAEPAPSVEYSSGSQIPL 621 Query: 206 VIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC----- 245 +I GDFN ++ + + F + Sbjct: 622 IICGDFNSYPGSAVYELMNRGHLIEDHPDLEKRLYGNLSRLGMSYPFNLKSAYGAIGELE 681 Query: 246 NANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 N IDY + + SDH I ++ F Sbjct: 682 FTNYTPDFADVIDYIWYTSNALQVTGLLGEVDKEYLQRVPGFPNYHFPSDHLAIMAEFSF 741 >gi|256026412|ref|ZP_05440246.1| hypothetical protein PrD11_00155 [Fusobacterium sp. D11] gi|289764427|ref|ZP_06523805.1| dnase I -like protein dhp2 precursor [Fusobacterium sp. D11] gi|289715982|gb|EFD79994.1| dnase I -like protein dhp2 precursor [Fusobacterium sp. D11] Length = 278 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 97/306 (31%), Gaps = 37/306 (12%) Query: 1 MIRKYVLALVF--FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 M + +L+++F F + T S+A + + S+NI L D Sbjct: 1 MKKGKLLSIIFALFFILSTLSLADEAYIASFNILRLGA-------------AKKDMVQTA 47 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVR 117 + K DIV L E+ + + V ++ + + I+ S+ + A + Sbjct: 48 KILKGF--DIVGLVEVINRDGVEELVDELNKQSDEKWDYHISPFGVGSSKYKEYFAYVYK 105 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 K V+ ++ K S R +I + +H Sbjct: 106 KDKVKFIKSEGFYKNGKSSL----LREPYGATFQIGNFDFTFVLVHTIYG--------NN 153 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + + + ++ + E IAGDFN + +K D I Sbjct: 154 ESQRKAENYKMVDVYNYFQDRDEKENDIFIAGDFNL-YALDESFRPLYKHADKITYAIDP 212 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + N D F Q + S + ++ D+ K + +SDH P Sbjct: 213 AIKTTIGAKGRANSY-----DNFFFSQKYSQEFTGSS-GALDFSGDNPKLMREIVSDHIP 266 Query: 298 ISIDYD 303 + I + Sbjct: 267 VFIVVE 272 >gi|149278217|ref|ZP_01884355.1| exodeoxyribonuclease III [Pedobacter sp. BAL39] gi|149230983|gb|EDM36364.1| exodeoxyribonuclease III [Pedobacter sp. BAL39] Length = 256 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 91/304 (29%), Gaps = 73/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAVAK 82 ++++S+N+N + + + + +DAD+V LQE+ + + + + Sbjct: 1 MKIISYNVNGIRSASTKNFLG---------------WLQAMDADMVCLQEVKALPSQIPE 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + ++ ++ +A+ + ++ G + + Sbjct: 46 LLVLIEQLGYHHYWFPA-------EKKGYSGVAILTRIKP----NHVEYGCGEEWIDKEG 94 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + ++ +++ S D + + L+ I Sbjct: 95 RI-----LRADFDTFSLMSLYMPSGSSGDERQTKKYEFMRFFDTYTEQLRKEI------- 142 Query: 203 VPFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNAN 248 +I+GD+N + ++ W + N+ I + + + Sbjct: 143 PNLIISGDYNICHTAIDIHNPKSNANSSGFLPEEREWMELFLNNGFIDTFRHFNKDPHHY 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDY + L + + SDHCP+ Sbjct: 203 TWWSFRAGSRSKNLGWRIDYHLATVPMLDRLKNVTILADAVH-----------SDHCPVL 251 Query: 300 IDYD 303 ++ + Sbjct: 252 LELN 255 >gi|254302413|ref|ZP_04969771.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322605|gb|EDK87855.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 253 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 79/301 (26%), Gaps = 78/301 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + + Y +ADI LQE +A Sbjct: 1 MKLISWNVNGIRA---------------AIKKGFLDYFNEQNADIFCLQETK-LSAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + G R Sbjct: 45 LELKGYHQYWNYAEKKGY----------SGTAIFTKQEPLSVS----YGLGIEEHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +K +++ ++ + + ++ ++ Sbjct: 91 -----VITLEFEKFYMVTVYTPN-------SKDELLRLDYRMVWEDEFRKYLKNLEKKK- 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + + + F + Sbjct: 138 PVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKFTELLDSGFIDTFRYFYPNLEQVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + K L+ SDHCP+ Sbjct: 198 SWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEIH-----------SQIEGSDHCPVV 246 Query: 300 I 300 + Sbjct: 247 L 247 >gi|261878952|ref|ZP_06005379.1| AP endonuclease domain protein [Prevotella bergensis DSM 17361] gi|270334463|gb|EFA45249.1| AP endonuclease domain protein [Prevotella bergensis DSM 17361] Length = 364 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 39/291 (13%), Positives = 78/291 (26%), Gaps = 39/291 (13%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 ++++S+N+ + E N + +Y K DADIV LQE + Sbjct: 95 EPPKDAIKVLSYNVWLFAGWEDGKNDPNP----------ILEYIKKQDADIVCLQESDNN 144 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + I+ + + I++ + K + L A Sbjct: 145 EVGKEKLDSALGPIY--QYCDTAKRGKGNTISIYSKYPILSKEHIEYESRGNLSAAFKLM 202 Query: 138 SRAGNRRAVELLVEINGKKI-------WVLDIHLKSFCF-LDSLENTYSPSCSLLSQQAQ 189 V +E G + ++ +K+ S + + AQ Sbjct: 203 IDGEEVLVVNNHLETTGLTVEEKSEFKTMIKGEMKAGKAESTSRHLVSKLGKASAIRAAQ 262 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 +P ++ GDFN + + + + + Sbjct: 263 AQAVARYIAYHCDMPIILCGDFNDSPISYAHRTI------AEGLTDCYVETANGPGISYH 316 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + ID + + F + SDH PI Sbjct: 317 HNGFYVRIDNIMCSAHFKPFACRVDNEIKN-------------SDHYPIYC 354 >gi|221120309|ref|XP_002161039.1| PREDICTED: similar to APEX nuclease (multifunctional DNA repair enzyme) 1 [Hydra magnipapillata] Length = 384 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 35/307 (11%), Positives = 82/307 (26%), Gaps = 70/307 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNA 79 +++ SWN+ L + Y D D++ LQE + Sbjct: 119 TLKICSWNVAGLKAWVNKNG---------------LNYVIKEDPDVLCLQETKCTENDLP 163 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + KN + + ++ ++ +++ K + + DS R Sbjct: 164 GQVLQMKNGPKVTNVSNSGYYMYWCNAEKKGYSGVSLWCKLKPLKVTYGLGIKEHDSEGR 223 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 + +K +++ ++ + + + L Sbjct: 224 L---------ITAEFEKYYIITTYVPNSGQKLIRLDYRRIWNTDYKNYVGEL-------- 266 Query: 200 ESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + P ++ GDFN + + + + F K + Sbjct: 267 KKKKPVIMCGDFNVAHTEIDIANPNSNKRNAGFTEEERSDFTALLEDGYIDTFRKLNPEK 326 Query: 245 CNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 A +DYF++ ++ + + SDH Sbjct: 327 TGAYTFWTYMMNARSKNKGWRLDYFIVTKDIEDDICDSVIRSSV-----------MGSDH 375 Query: 296 CPISIDY 302 CPI ++ Sbjct: 376 CPIVLNL 382 >gi|86145133|ref|ZP_01063464.1| hypothetical protein MED222_04430 [Vibrio sp. MED222] gi|85836710|gb|EAQ54830.1| hypothetical protein MED222_04430 [Vibrio sp. MED222] Length = 347 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 36/336 (10%), Positives = 86/336 (25%), Gaps = 59/336 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + ++N+ E S + + +LD D++ QE+ S ++ Sbjct: 7 ITFATFNLLNYLEPPNAYYDFENIYSFDEWQKKQHWMAEAISSLDCDVIGFQEIFSPQSL 66 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137 ++ + + +++ + IA R V + L Sbjct: 67 EQLMNELGYP-YFAVVDSADVEDDYLYTSPVVGIASRYPIENVQPVTPDSKLLTAFNLGD 125 Query: 138 SRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLENTYSPSCS------------ 182 + + NR V + + +V+ + + + Sbjct: 126 NFSFNRTPVHATITLPHLGSTDCYVVHFKSQRPTEPKAESIDVDNAQQGEKSQSDTLTRF 185 Query: 183 ------------LLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTI 228 +AQ L +I + ++ P V+ GDFN+ + + Sbjct: 186 HQEQLGSWLSSVQRGLEAQMLHQYITNHRYQTDQPVVLMGDFNKPLFNDEFKGLLSYSIN 245 Query: 229 DPNDSLIRFPKEKDSRCN-----------------ANKNLRNKIPIDYFVMDQNAYKFLI 271 +S + + + +DY +M Sbjct: 246 RDENSKHWLSHFRLKDSWDIYHQLHEQDLLEQRKPTHYYGASGSVLDYILMSNEFDCQNS 305 Query: 272 QESFSEILYNEDD------IKSRGKRLSDHCPISID 301 Y D + +DH +++ Sbjct: 306 SSMMEISCYTVLDHHLINPSFEHDQFSTDHAIVAVT 341 >gi|293368711|ref|ZP_06615316.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|292636176|gb|EFF54663.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] Length = 361 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 86/305 (28%), Gaps = 67/305 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++++S+N+ + + E + Y + +ADI+ LQE + Sbjct: 99 GSIKILSYNVMSFNNLEKKDGKNP-----------VLSYLVDSNADIICLQEYNTATNKK 147 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + ++ + H + +A K + + + Sbjct: 148 YLTEQDIKKALKAYPYQSVHQQG----KGDVQLACFSKFPILSIHPIEYESNYNGSMKY- 202 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------- 178 ++ +N + +++ HL+S Y Sbjct: 203 -------VLNVNNDTLTLINNHLESNKLTKEDRGMYEDMIKDPNAKKVKTGLRQLIRKLA 255 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + ++ + QA + I K ++ GDFN + + + +D F Sbjct: 256 EASAIRASQADSVAKAIAACKYPTT--IVCGDFNDG-SISYTHRILTQKLDD-----AFT 307 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + ID ++ N + + R + SDH PI Sbjct: 308 QSGKGLGISYNQNKFYFRIDNILISPNLKAY-------------NCTVDRSIKASDHYPI 354 Query: 299 SIDYD 303 Sbjct: 355 WCYIS 359 >gi|255101285|ref|ZP_05330262.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile QCD-63q42] Length = 209 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 86/276 (31%), Gaps = 70/276 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V++NI+ + T + Y K LD D++ LQE+ +A Sbjct: 1 MKIVTYNIHKCMDSNN-----------RLTLTKMGLYLKQLDCDVICLQEVLYPQFLALK 49 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 N +F + + +N S+ R Sbjct: 50 AVLNMDGVFATNVKKVNMIYG---------------ICTFTTSKMLNSNHFFLTSKKEQR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A+ + ++ G+ I V++ HL ++A+ L + I + + Sbjct: 95 GALCITIDAYGRIINVINTHLGLD----------------RQERAKQLDEIIDYRNRLVG 138 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 ++ GDFN K +L +D +++ ++ IDY ++ Sbjct: 139 IVILCGDFNEKNVFLSMFNDMAISLNK--------------SYLPTFEKSNSRIDYIFVN 184 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 +N LSDH P+ Sbjct: 185 KNTELK--------------GYTVEKIYLSDHYPVI 206 >gi|166710239|ref|ZP_02241446.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzicola BLS256] Length = 259 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 85/305 (27%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ SWN+N+L+ L+Q+ ++V +QE + + Sbjct: 1 MKIASWNVNSLN----------------VRLPHLQQWLTAFAPEVVGIQETKLEDHRFPD 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + +A+ ++ + Q F Sbjct: 45 AALAELGYRSVFC------------GQKTYNGVAILSRSPALDVQ-----MGIPGFDDVQ 87 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + ++++++ + + + + Y + DWI Q+ ++ Sbjct: 88 QRVIAATV-----DGVRIINLYVVNGQDVGTDKYAYK------LRWLAAAHDWIAQELQT 136 Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPND-----------SLIRFPKEKDSRCN 246 V+ GDFN + +D + D L + Sbjct: 137 YPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAALEKLLALGLHDAFRLHTQDAE 196 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID ++ ++ D +R SDH P Sbjct: 197 HFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGI-------DREPRTWERPSDHAP 249 Query: 298 ISIDY 302 + Sbjct: 250 AWVRL 254 >gi|53714586|ref|YP_100578.1| hypothetical protein BF3300 [Bacteroides fragilis YCH46] gi|52217451|dbj|BAD50044.1| conserved hypothetical protein [Bacteroides fragilis YCH46] Length = 378 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 40/342 (11%), Positives = 92/342 (26%), Gaps = 57/342 (16%) Query: 2 IRKYVLALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKN----------- 45 ++K ++A F L+ AQ + +N+ L + + + Sbjct: 40 MKKLIIAFNFLLLLAVGGRAQDHADRLYSVAFYNLENLFDTIHDTGKNDYEYLPDAAKGW 99 Query: 46 SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + ++ S L + L D + + E+ + + + + + Sbjct: 100 NSEKYRSKLKNLSKVLGELSRDKVPAGPAAIGVAEVENRRVLDDLIRQPE---LAAGGYR 156 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 H + I A+ K + L + + R + + E+ G K+W Sbjct: 157 YIHYEGPDKRGIDCALLYDPKQFTPHATALVLSTPFEGDTIHKTRGFLIVGGELAGDKVW 216 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 ++ H S + + + Q + LKD + + + + +I GD N L Sbjct: 217 LIVNHWPSRGAAEPVRV-------HAAMQVKALKDSLMRT-DPDLKLIIMGDLNDDPMDL 268 Query: 219 GN-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273 + + + +D D ++ + Sbjct: 269 SLAVLGAKKHVEDMTEDDLYNPWWVTLEDKGVGTLLYRGKWNLFDQIILSSTLLQATKGL 328 Query: 274 SFSEI------------------LYNEDDIKSRGKRLSDHCP 297 + + SDH P Sbjct: 329 KYDHNEVFMRDYLFQQDGKYKGAPLRTYGGRVWLDGYSDHLP 370 >gi|118375590|ref|XP_001020979.1| exodeoxyribonuclease III family protein [Tetrahymena thermophila] gi|89302746|gb|EAS00734.1| exodeoxyribonuclease III family protein [Tetrahymena thermophila SB210] Length = 396 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 38/307 (12%), Positives = 90/307 (29%), Gaps = 71/307 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNA 79 Q +++ WN+N L R L++Y K + DI+ L E + N Sbjct: 115 QNIKIACWNVNGL--------------RAVLKREDLQKYIKQENPDILCLNETKIDESNF 160 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + K+ +Y ++ +++ K + + + ++ R Sbjct: 161 IKEKVYKDIPSGYYQYWNF-----CIPPIKGYSGVSIFSKEKVISIKKGIDIAEHENEGR 215 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 ++ K +++ +++ + + S + ++++ Q K Sbjct: 216 ---------VLTAEFDKFYLVVVYVPNAGSELVRLDYRVNSFD------KDFQNYLNQLK 260 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRC 245 ++ GD N + + P I + Sbjct: 261 LKKN-VILCGDLNVAHQEIDIANPKSNRNSPGFTIEERNSFSKFLESGWIDTFRFLYPET 319 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + IDYFV+++ + + +Y SDHC Sbjct: 320 IKYSWWSVRTKARESNIGWRIDYFVVNKEFKSSIKDSMINNNIY-----------GSDHC 368 Query: 297 PISIDYD 303 P+ + Sbjct: 369 PVEFILN 375 >gi|302787589|ref|XP_002975564.1| hypothetical protein SELMODRAFT_103806 [Selaginella moellendorffii] gi|300156565|gb|EFJ23193.1| hypothetical protein SELMODRAFT_103806 [Selaginella moellendorffii] Length = 306 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 92/310 (29%), Gaps = 65/310 (20%) Query: 15 PCTASVAQKV-RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 P + + + +++SWN+N L + ++L + A + D D++ LQE Sbjct: 28 PSSPPSEKNLVKVISWNVNGLRA------CMKRKNELEEEGSVLARLANSEDFDVLCLQE 81 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + + ++ S+ ++ A+ + V + Sbjct: 82 TKLQEKDVEAIKQKILGGYSNSFWT-----CSSSKLGYSGCALISRIKPVSVTYGLGISQ 136 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLK 192 D R +V +++ +++ + L+ L + S L+ Sbjct: 137 HDGEGR---------VVTAEFDTFFLVSVYVPNSGQRLERLTYRTTEWDPAFSTYLLELE 187 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRF 237 P ++ GD N + D ++T + L+ Sbjct: 188 KR--------KPVIVTGDLNCAHEEIDIYDPDGNKRSAGFTCEERTSFQTNFIDKGLVDT 239 Query: 238 PKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 +++ + +DYF++ Q + D Sbjct: 240 FRKQHPLAVGFTYWSYRSNARPQNKGWRLDYFLVSQGLVSNVA-----------DSYVLP 288 Query: 289 GKRLSDHCPI 298 SDHCPI Sbjct: 289 QLDGSDHCPI 298 >gi|297199538|ref|ZP_06916935.1| predicted protein [Streptomyces sviceus ATCC 29083] gi|297147430|gb|EFH28625.1| predicted protein [Streptomyces sviceus ATCC 29083] Length = 371 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 47/277 (16%), Positives = 83/277 (29%), Gaps = 25/277 (9%) Query: 39 GVSLWKNSVKRTTSDYT-----LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFY 93 G S W V+ D + +DAD++ E+ A+ + F Sbjct: 107 GRSAWAGWVELGQDDLDLDTVRNTGRVVSEVDADVLLTVEVEDRLALER-FNSQVLAGAL 165 Query: 94 STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-LGAKDSFSRAGNRRAVELLVEI 152 D N+ I + + +++ R +R E + + Sbjct: 166 GRRPYPYALLIDGNDSRGIDIGIFSRYPITSLRTHIFETNPNRPDERLFSRDCPEFEIRL 225 Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 NG + +L HLKS D +L QA+ + + E ++AGD N Sbjct: 226 NGTPLVILGNHLKSKSNDDP---------ALRLAQARRVAEIYRAALERTPHVIVAGDLN 276 Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 + + S + + + IDY +M ++ + Sbjct: 277 DFPSSDSVATLEGAGLRDAMSHRSY-RGLPGTFKP--CQSERDKIDYLLMSPEVWQEVQH 333 Query: 273 ESFSEILYNEDDIKSRG------KRLSDHCPISIDYD 303 D IKS SDH + +D D Sbjct: 334 VGLETRGICADGIKSFDTVTSPIDAASDHAALYMDVD 370 >gi|119485593|ref|ZP_01619868.1| hypothetical protein L8106_24460 [Lyngbya sp. PCC 8106] gi|119456918|gb|EAW38045.1| hypothetical protein L8106_24460 [Lyngbya sp. PCC 8106] Length = 258 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 34/284 (11%), Positives = 81/284 (28%), Gaps = 31/284 (10%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V++N+ G + W ++ Q DAD+V QE ++ + Sbjct: 1 MKIVTFNVRFDKPDPGNNAWV-------WRRQVMAQLMAEWDADLVGTQEGKAHQLLDLH 53 Query: 84 FPKNTWCIFYSTERLIN-HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + ++ + + + + + Sbjct: 54 RRLSNYQTVGVDRQGNGLSEYCAIFYHQQRWRCLKTGDFWLSKTPKLVGSVTAEWENPVP 113 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + E G+ ++ + S AQ + D ++Q Sbjct: 114 RMVSWGVFEGVGQDKPIIIFNTHFDYH----------SQRARELSAQLISDRLSQFNADE 163 Query: 203 VPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 F++ GDFN + + + D+L ++ + +D Sbjct: 164 YLFIVTGDFNAEPDSFTRKTLLKPLTNGVVLCDTLADIDLDEQMTYHEFTGKGF-AAVDT 222 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + ++I Y SDH P+ ++ Sbjct: 223 IYYDSRLNLHQVSVDRTQIDYV---------WPSDHFPVIAQFN 257 >gi|262198814|ref|YP_003270023.1| exodeoxyribonuclease III Xth [Haliangium ochraceum DSM 14365] gi|262082161|gb|ACY18130.1| exodeoxyribonuclease III Xth [Haliangium ochraceum DSM 14365] Length = 260 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 69/303 (22%), Gaps = 68/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + + + + DIV LQE+ Sbjct: 1 MKIATWNING----------------MRARLDFVLHWLRARQPDIVGLQELKLTED---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y + + +AV + L + + R Sbjct: 41 ------QFPYDALSELGYHAVVVGQKAWNGVAVLSREPAELVHAGLPGQDELGARLVCVR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + L Q L + + Sbjct: 95 VADMA---------FTTAYCPNGKSTSHPDFLRKLGWFDALIGQLGTLSEVAGASAGA-- 143 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN + + ++ I + + F + A Sbjct: 144 --VLCGDFNLCPTPLDSYNEDLLRGSIFHTDAERERYQRILDHGFVDLF-RAAHPEERAF 200 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ + + + + D + SDH P+ Sbjct: 201 SWWDYRGGAFHKRQGLRIDFVLGTADIAARTERVEIDRTYRKKHDGLT----ASDHAPVI 256 Query: 300 IDY 302 + Sbjct: 257 AEL 259 >gi|160915303|ref|ZP_02077516.1| hypothetical protein EUBDOL_01312 [Eubacterium dolichum DSM 3991] gi|158433102|gb|EDP11391.1| hypothetical protein EUBDOL_01312 [Eubacterium dolichum DSM 3991] Length = 252 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 85/303 (28%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N + + + +DADI +QE Sbjct: 1 MKLVSWNVNGIRACMKKGFM---------------DFFQAIDADIFCIQETKMQPG-QLE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + ++ ++ ++ + V K + + D R Sbjct: 45 IETDGYVQYMNS----------ADKKGYSGVMVFSKKEPLSVSYGLGIDEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ +++ ++ + + Q L + Sbjct: 91 -----VITCEYDTFYLVCVYTPNSKDGLLRLDYRMQWEDAFRAYLQRL--------KESK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GD N + T+ + + + + N Sbjct: 138 SVVVCGDLNVAHQEIDLKNPKTNRRNAGFTDEEREKMTTLLSSGFVDSYRYLYPDKENVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ ++A + + + +Y SDHCP+S Sbjct: 198 SWWSYRFSAREKNAGWRIDYFLVSEDAKERIEEAQIHTDIY-----------GSDHCPVS 246 Query: 300 IDY 302 + + Sbjct: 247 LSF 249 >gi|119470140|ref|ZP_01612906.1| hypothetical protein ATW7_13643 [Alteromonadales bacterium TW-7] gi|119446561|gb|EAW27835.1| hypothetical protein ATW7_13643 [Alteromonadales bacterium TW-7] Length = 394 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 37/352 (10%), Positives = 93/352 (26%), Gaps = 72/352 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 ++++ ++N+ E ++ + +Y D++ QE+ S + Sbjct: 41 ELKIATFNLFNYLEPPNAYYEFERIYTAEQWARKQRWITEYINEQQPDVIGFQEIFSIES 100 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL---LGAKDS 136 + ++ + ++ + IA + V V+ + + Sbjct: 101 LKELMLNQGYN-HFAVVDKPHVIDDFIFKHPVVGIASKYPIVDVIAVEHDEELACSLGLT 159 Query: 137 FSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW--- 190 + + +R+ + V + +V+ K N + + + Sbjct: 160 QAFSFSRKVLRATVTLPHLGDTDCYVVHFKSKRGMLEVDEHNKAVTAEQNIIDILKANVA 219 Query: 191 ----------------LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI------ 228 + IT+++ + P V+ GDFN + N T+ Sbjct: 220 GSWGSTIQRGSEATLLMIQMITRREATQNPMVLMGDFNNDLADGVLNHLLTNTLRFAPAM 279 Query: 229 -------------------------------DPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 +D +R + + + Sbjct: 280 DAKAYLAKYCLYDSWALFEKLVITADDAQQASNSDGENTAQTAPLTRKATHYFGTSSSVL 339 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKRLSDHCPISIDYD 303 DY ++ F +N D R +DH + I + Sbjct: 340 DYILLSCEFDPSYDDSFFEVSNHNTYDRHLINPEYERDDLTTDHGVVCITLN 391 >gi|327438448|dbj|BAK14813.1| exonuclease III [Solibacillus silvestris StLB046] Length = 252 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 80/303 (26%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N + Y + +DAD LQE + Sbjct: 1 MKFISWNVNGIRACVNKGF---------------LDYFREMDADFFCLQETKCQVGQIDL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++S ++ AV K+ + G ++ + R Sbjct: 46 QLEGYYQYWHSAV-----------KKGYSGTAVFTKHEPLAV----YYGIENEIAADEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + ++++ + + + + + L ++ Sbjct: 91 I-----LTLEYENFYLVNTYTPNAKRDLTRLEERLLWEDRMRIYLKEL--------DAKK 137 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + L + + F + Sbjct: 138 PVIYCGDLNVAHSELDIKNVKSNIGNSGFTYEERGKMTDLLTSGFTDTFRHFHPDVTDHF 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ + + + S + SDHCPI Sbjct: 198 TWWSYMAKVRERNIGWRIDYFIISDRLVEKVEEASIHSEIL-----------GSDHCPIV 246 Query: 300 IDY 302 + Sbjct: 247 LKL 249 >gi|325479409|gb|EGC82505.1| exodeoxyribonuclease III [Anaerococcus prevotii ACS-065-V-Col13] Length = 273 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 82/304 (26%), Gaps = 56/304 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWNI++L+ + + R + + K DAD++ LQE + Sbjct: 1 MKFISWNIDSLNAALTSDSNRAVMSR------EVLETIKREDADVIALQETKLPKSGPSK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 K F+ + + + K + +++P + A + G Sbjct: 55 KHKEKLAEFFPDYDYVWTCSCEGARKSYAGTMTLYKKGLDVTETFPKIDAPGTMDFEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + + ++ + + + L Sbjct: 114 -----IVTLEFDDFYFTQVYTPNAGNGLVRLADRQIWDEKYADYLEGLDKI--------K 160 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + +GDFN + + + + F A Sbjct: 161 PVIASGDFNVAHTPIDLAHPENNHISPGFTDEEREGFTRLLARGFTDTFRHLNKDLEGAY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF++ + + + + DH PI Sbjct: 221 TWWAQRVKTSKINNSGWRIDYFLVSDRLMERVKSSTIINSGDRQ-----------DHTPI 269 Query: 299 SIDY 302 ++ Sbjct: 270 MLEI 273 >gi|288916264|ref|ZP_06410643.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EUN1f] gi|288352243|gb|EFC86441.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EUN1f] Length = 818 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 40/335 (11%), Positives = 90/335 (26%), Gaps = 77/335 (22%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ--YAKNLDADIVFLQE 73 + + ++N+ L+ + + + L + DI+ L+E Sbjct: 480 TPPKKTGDLSIATYNVENLTAGDS-----------DAKFARLAEAVVVNLGKPDILALEE 528 Query: 74 MGSYNA-----------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIH----- 111 + N A V + S +I Sbjct: 529 IQDNNGTVDDGVVAADQTVARFIAAIVAAGGPTYDWRSINPNDGTDGGAPGGNIRQVFLF 588 Query: 112 ----------------TAIAVRKKNVR---VLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152 TA++V K V + P S + + +R+ + Sbjct: 589 NPARTTFVDRPGGDANTAVSVLKVRPTSNQVYLSASPGRINPTSSAWSTSRKPLVGEFLY 648 Query: 153 NGKKIWVLDIHLKSFCFLDSLENTY-----SPSCSLLSQQAQWLKDW---ITQKKESLVP 204 +G K + + + D + S + + QA ++++ + K + Sbjct: 649 DGDKQLFVVANHFNSKGGDYPLSAAVQPPVRSSEAQRTSQATEVRNFVADLAAKSGNAAR 708 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSL--IRFPKEKDSRCNANKNLRNKIPIDYFVM 262 V+ GD N T+ N +L + + N +D+ ++ Sbjct: 709 VVVLGDINDYQFSP-----TLATLTDNGALLKPLINDLPVNERYSYVFDGNSQTLDHILI 763 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +++ + SDH P Sbjct: 764 SPTIKGYSYGVVHVNAEFSD--------QASDHDP 790 >gi|212212637|ref|YP_002303573.1| endonuclease/exonuclease/phosphatase family protein [Coxiella burnetii CbuG_Q212] gi|212011047|gb|ACJ18428.1| endonuclease/exonuclease/phosphatase family protein [Coxiella burnetii CbuG_Q212] Length = 255 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 89/296 (30%), Gaps = 55/296 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 ++S+NI+ +R+ + +DADIV LQE+ Sbjct: 3 SLTPKRDAFTVLSYNIHKGFSARYRRFV----------LPDIREALRAIDADIVLLQEVQ 52 Query: 76 SYNAVAKVFPKNTWC------IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 + +++ I S + K H A+ + ++ Sbjct: 53 GKHRKSRLKKFAHADLPQTEFIAESKWPHYMYGKNAVYGSAHHGNALLSNFPFKMVENIN 112 Query: 130 LLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + S S+ +R + +++ ++ V+ IHL F + Q Sbjct: 113 V-----SLSQRASRSILHAIIDYEPTVELHVICIHLGLF-------------RAERDYQL 154 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 L I S +IAGDFN G + K ++ + + Sbjct: 155 ITLSKRIEAHVPSHASLIIAGDFNDW--RRGAFNYMEKELELKEVYKVLEGKHAKT---- 208 Query: 249 KNLRNKIPI--DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + D L S +S K+LSDH P+ + Sbjct: 209 -YPASRATLEVDRIYYRG-----LKLLSGEIFN------ESYWKKLSDHLPLHAKF 252 >gi|90421802|ref|YP_530172.1| exodeoxyribonuclease III (xth) [Rhodopseudomonas palustris BisB18] gi|90103816|gb|ABD85853.1| exodeoxyribonuclease III (xth) [Rhodopseudomonas palustris BisB18] Length = 270 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 32/306 (10%), Positives = 71/306 (23%), Gaps = 65/306 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 L +WNIN L+ ++ ++ D++ LQE Sbjct: 3 FSLSTWNIN----------------SVRLRIDLVAKFLESERPDVLCLQETKCP---DDA 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + RL + + +A+ + DS Sbjct: 44 FPLKRFK------RLGYEHVALNGQKGYHGVAIISRLPFASTDVRIFCENLDSRH----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++ + D + +P +K + Sbjct: 93 --ISVAFAAEHTSAPLVLHNFYVPAGGDIPDPELNPKFKHKLAFLDEMKSCEPLHPQGDA 150 Query: 204 PFVIAGDFNRKINYLG--NNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247 ++ GD N + ++ K + L + Sbjct: 151 RHILVGDLNVAPHEHDVWSHKQLLKVVSHTPIECEKLLAAQHQGGWLDVARERIALSDKI 210 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + Y +R SDH P Sbjct: 211 YTWWSYRAADWTIANRGRRLDHIWVSPAL-------GPCVQDYQVTRDARGWERPSDHVP 263 Query: 298 ISIDYD 303 +++ + Sbjct: 264 VTVTME 269 >gi|320037679|gb|EFW19616.1| endonuclease/exonuclease/phosphatase [Coccidioides posadasii str. Silveira] Length = 290 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 41/289 (14%), Positives = 87/289 (30%), Gaps = 21/289 (7%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+++ NI + K +R L + ++ + LQE+ Sbjct: 8 SIRILTHNIRY-ATSRPFKGEKPWPERKHLVLNELIFHTRHNAESFICLQEVLRVQLEDV 66 Query: 83 VFP----KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + +TW + S + + V P + +K + Sbjct: 67 LSGLNSHGDTWAYIGVGRDDGKQAGEYSPIFYRPDVWKLETWETVWLSETPEVPSK-GWD 125 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 A R + + VL + D + S L+ + + ++ + Sbjct: 126 AASIRIVTVGVFRHRASRKTVLAMTTHL---DDQGSGSRYESAKLI---LRTIDGYLHKF 179 Query: 199 KESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCNANK-NLRNK 254 K+ + +AGDFN ++N D +D D + + + + Sbjct: 180 KDRISGLFLAGDFNSEVNQEAYQVFIDPTSPLVDARDQIKPDERYGNEITYTGFGYEGER 239 Query: 255 I-PIDYFVMDQNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPISID 301 IDY ++ + ++ Y + G SDH + D Sbjct: 240 ETRIDYILVGPKTEQGF---PWTVKQYGVLPNKFDDGVFSSDHRAVVAD 285 >gi|308274119|emb|CBX30718.1| Exodeoxyribonuclease [uncultured Desulfobacterium sp.] Length = 263 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 79/306 (25%), Gaps = 74/306 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N L + + + ++ DIV +QE K+ Sbjct: 7 IKLVSWNVNGLRAIIQKDFFGS---------------IQRMNPDIVAIQE-------TKL 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S E ++ + ++ +A + + D R Sbjct: 45 QEHQRTDKMLSFEDYNSYWSYSTVKKGYSGVATFTRIAPQNVKEGIGNPGYDEEGRI--- 101 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + +++ + D + K Sbjct: 102 ------LETDFGDFIFFNVYFPNGQMGDDR-------LQYKLNFYNDFFAYTDSLKNQGK 148 Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 +I+GD+N N + D + I + + Sbjct: 149 NLIISGDYNTAHNEIDLTHPKPNEKYSGFLRVERDWMDEIIKRG--YVDTFRYFYPEKVK 206 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +DY + +N + ++ SDHCP+ Sbjct: 207 YSWWSYRANARKKNVGWRVDYIFVSRNIIDK---------GWVKEPFIDNDIFGSDHCPV 257 Query: 299 SIDYDF 304 + +F Sbjct: 258 GLVLEF 263 >gi|326775686|ref|ZP_08234951.1| exodeoxyribonuclease III Xth [Streptomyces cf. griseus XylebKG-1] gi|326656019|gb|EGE40865.1| exodeoxyribonuclease III Xth [Streptomyces cf. griseus XylebKG-1] Length = 259 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 79/304 (25%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++N+N T+ L + ++ D++ +QE Sbjct: 1 MRIATYNVN----------------SITARLPRLLAWLESSGTDVLCVQETKCTAE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R ++ + +A+ + + L + R Sbjct: 41 ------QFPAEALREAGYASAVNATGRWNGVALLSRVGLSDVVTG-LPDGPEYEGVQEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +++ + ++ Y + + L+ + + Sbjct: 94 A-----ISATCGPLRLWSVYVPNGREVEHAHYAYK------LRWLEALRKAVAADAAKAL 142 Query: 204 PFVIAGDFNRKINYLGNNDDFW---------------KTIDPNDSLIRFPKEKDSRCNAN 248 PF + GDFN D ++ P+ A Sbjct: 143 PFAVLGDFNVAPTDEDVWDPALFEGATHVTPAERVALAALEAEGLSEVHPRPLKYD-RAY 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID + + D + +GK SDH P+ Sbjct: 202 TFWDYRELRFPKNKGMRIDLTFGNAPFTAAVKDSYV-------DREERKGKGASDHAPVV 254 Query: 300 IDYD 303 +D D Sbjct: 255 VDLD 258 >gi|302345268|ref|YP_003813621.1| endonuclease/exonuclease/phosphatase family protein [Prevotella melaninogenica ATCC 25845] gi|302149592|gb|ADK95854.1| endonuclease/exonuclease/phosphatase family protein [Prevotella melaninogenica ATCC 25845] Length = 324 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 34/321 (10%), Positives = 85/321 (26%), Gaps = 50/321 (15%) Query: 20 VAQKVRLVSWNINTLSE-------QEGVSLWKNSVKRTT----SDYTLLRQYAKNLD--- 65 ++ +V N L + + L + T + Q Sbjct: 18 AQTRLTIVELNTENLFDTRHDTLKNDYEFLPDSPRHWTRTKYWQKLNRIGQTIIACGEDS 77 Query: 66 -----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 DIV L E+ + + + + ++ + + SN+ +A+ Sbjct: 78 SGWTLPDIVGLCEVENDSVLFDLTRRS-----LLRKARYEYVMTASNDARGIDVALLYSP 132 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSP 179 + R + + EI +G + V +H S + Sbjct: 133 FSFRLIKADTIRVIPMKEMRPTRDILHVEGEIESGDTLHVFLLHAPSRMGGELY------ 186 Query: 180 SCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 S + L+ I + + ++ GDFN + + + + Sbjct: 187 SRPFRMHVMERLRSAIDSLRSAYTDPKLLVMGDFNDYADSPSLQLAYEYGLIN---ISAG 243 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY--------------NED 283 ++ + +D ++ N ++ ++ + Sbjct: 244 VHGRNGAKGTYRYHGEWGSLDQILVSVNLRSWVTDCRINDAPFLLEEDTKYGGVKPRRNY 303 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 + SDH P+ + + Sbjct: 304 NGMRFNNGFSDHLPLVLRLQY 324 >gi|218189226|gb|EEC71653.1| hypothetical protein OsI_04096 [Oryza sativa Indica Group] Length = 499 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 37/313 (11%), Positives = 89/313 (28%), Gaps = 70/313 (22%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + + ++++SWN+N L + + Q A+ D DI+ LQE Sbjct: 230 PSLSKDTKALKILSWNVNGLKALLKSRGF------------SIHQLAQREDFDILCLQET 277 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 +V + + + + ++ A+ + + + + Sbjct: 278 KMQEKDVEVIKEGLLEGYTHSFWT-----CSVSKLGYSGTAIISRVKPLSIKYGLGVPDH 332 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKD 193 D+ R +V + ++L ++ + L L + L + L+ Sbjct: 333 DTEGR---------VVTVEFNDFYLLTAYVPNSGDGLKRLTYRVTEWDPSLGNYMKDLEK 383 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFP 238 P ++ GD N + +D + Sbjct: 384 --------SKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTIEERESFETNFLSKGFVDTF 435 Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 +++ + +DYF++ ++ + + D Sbjct: 436 RKQHPNVVGYSYWGYRHNARKTNKGWRLDYFLVSESIAERVH-----------DSYIIPD 484 Query: 290 KRLSDHCPISIDY 302 SDH P+ + Sbjct: 485 ISASDHSPLGLVL 497 >gi|163787138|ref|ZP_02181585.1| exodeoxyribonuclease [Flavobacteriales bacterium ALC-1] gi|159877026|gb|EDP71083.1| exodeoxyribonuclease [Flavobacteriales bacterium ALC-1] Length = 253 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 90/303 (29%), Gaps = 72/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+N+N + + K D D++ LQE+ K Sbjct: 1 MKIVSYNVNGIRAAINRGF---------------IDWLKATDPDVICLQEI-------KA 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +S + + ++ +A+ K + ++ G R Sbjct: 39 MEEQLDLSLFSDAGYGYNYWFSAQKKGYSGVAILCK----SKPNHIEYGTGIESMDFEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ + V+ ++L S + + + +++ ++ Sbjct: 95 N-----IRVDYDNVSVMSMYLPSGTND--------ARLAHKFEYMDLIHEYLNNLQKEKS 141 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP-------------NDSLIRFPKEKDSRCNANKN 250 V+ GD+N + ++ K + + I + + Sbjct: 142 NLVVVGDYNICHEAIDIHNPKMKGVSGFLPEEREWLGNFIDSGFIDSFRYLHPKRQEYSW 201 Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + +DY + + + + + + SDHCPI ++ Sbjct: 202 WSYRANSRANNKGWRLDYAMASKPLQENIKRSVILTEAVH-----------SDHCPILLE 250 Query: 302 YDF 304 +F Sbjct: 251 LEF 253 >gi|115440515|ref|NP_001044537.1| Os01g0801000 [Oryza sativa Japonica Group] gi|55296319|dbj|BAD68137.1| putative DNA-(apurinic or apyrimidinic site) lyase (ARP) [Oryza sativa Japonica Group] gi|55297696|dbj|BAD68286.1| putative DNA-(apurinic or apyrimidinic site) lyase (ARP) [Oryza sativa Japonica Group] gi|113534068|dbj|BAF06451.1| Os01g0801000 [Oryza sativa Japonica Group] gi|215715310|dbj|BAG95061.1| unnamed protein product [Oryza sativa Japonica Group] gi|222619408|gb|EEE55540.1| hypothetical protein OsJ_03774 [Oryza sativa Japonica Group] Length = 499 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 37/313 (11%), Positives = 89/313 (28%), Gaps = 70/313 (22%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + + ++++SWN+N L + + Q A+ D DI+ LQE Sbjct: 230 PSLSKDTKALKILSWNVNGLKALLKSRGF------------SIHQLAQREDFDILCLQET 277 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 +V + + + + ++ A+ + + + + Sbjct: 278 KMQEKDVEVIKEGLLEGYTHSFWT-----CSVSKLGYSGTAIISRVKPLSIKYGLGVPDH 332 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKD 193 D+ R +V + ++L ++ + L L + L + L+ Sbjct: 333 DTEGR---------VVTVEFNDFYLLTAYVPNSGDGLKRLTYRVTEWDPSLGNYMKDLEK 383 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFP 238 P ++ GD N + +D + Sbjct: 384 --------SKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTIEERESFETNFLSKGFVDTF 435 Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 +++ + +DYF++ ++ + + D Sbjct: 436 RKQHPNVVGYSYWGYRHNARKTNKGWRLDYFLVSESIAERVH-----------DSYIIPD 484 Query: 290 KRLSDHCPISIDY 302 SDH P+ + Sbjct: 485 ISASDHSPLGLVL 497 >gi|265767350|ref|ZP_06095016.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263252655|gb|EEZ24167.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 365 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 87/302 (28%), Gaps = 64/302 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++L+S+NI + + + + Y KN +ADIV +QE Sbjct: 99 NSIKLLSYNIMSFGNMKKENGQNP-----------ILNYIKNSNADIVCMQEYAGSETAK 147 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 N K+ + +A K + + R+ Sbjct: 148 IHLSNKEIRQALKDYPHHN-IKQVGKTGAGSQLACYSKFPILSAR--------MLDYRSN 198 Query: 142 NRRAVELLVEINGKKIWVLDIHLKS-----------------------FCFLDSLENTYS 178 ++ ++I + +++ HL+S + L N + Sbjct: 199 YNGSMVYEIKIGKDTVLLINNHLESNKLTREDKVVYEDMLKDPKAGKVKSGVRQLVNKLA 258 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + ++ S QA+ + I ++ GDFN + + D F Sbjct: 259 EASAIRSAQARTIAQEIAHSPYPS--VIVCGDFNDSPISYAHR------VISQDMDDAFT 310 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + ID ++ +N + +D SDH PI Sbjct: 311 ESGCGLGISYNQNKFYFRIDNILVSKNL----KASGCTVDNSIKD---------SDHYPI 357 Query: 299 SI 300 Sbjct: 358 WC 359 >gi|41410014|ref|NP_962850.1| hypothetical protein MAP3916c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398847|gb|AAS06466.1| XthA [Mycobacterium avium subsp. paratuberculosis K-10] Length = 272 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 73/305 (23%), Gaps = 64/305 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N S + + + D++ +QE + Sbjct: 1 MRLATWNVN----------------SIRSRLPRVLDWLARTEVDVLAMQETKCADG---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + + S Sbjct: 41 ------QFPTLPFFELGYEVAHVGFNQWNGVAIASRVGLDDVRVGFEGQPSWSGKPEVAA 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + + + +++ + + Y L+D Sbjct: 95 AAEARALAATCAGVRIWSLYVPNGRAVGDPHYAYKLD------WLAALRDSAAAWLREDP 148 Query: 204 P--FVIAGDFNRKINYL----------------GNNDDFWKTIDPNDSLIRFPKEKDSRC 245 +AGD+N F +D + + P Sbjct: 149 AAQIALAGDWNIAPQDDDVWSMEFFAGATHVSEPERRAFNAILDAQFADLVRPFAPGPGV 208 Query: 246 NANKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + R + ID+ + + D + +GK SDH P+ Sbjct: 209 YTYWDYTALRFPKRQGMRIDFILGSPALARR-------VTHAQIDREERKGKGASDHAPV 261 Query: 299 SIDYD 303 +D Sbjct: 262 LVDVS 266 >gi|307596055|ref|YP_003902372.1| exodeoxyribonuclease III Xth [Vulcanisaeta distributa DSM 14429] gi|307551256|gb|ADN51321.1| exodeoxyribonuclease III Xth [Vulcanisaeta distributa DSM 14429] Length = 246 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 84/297 (28%), Gaps = 69/297 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+VSWN+N L R+ L + + D+V LQE+ S V Sbjct: 1 MRIVSWNVNGL--------------RSIMRKGSLDRLLSMGNYDVVLLQEIRSSGDVPLT 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ + K + + D+ R Sbjct: 47 IMGLGYEAYPFPAERKGYA----------GVMTLTKVKPISVIKGLGIKEFDAEGR---- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +V++ + S C + + L+ S Sbjct: 93 -----VITVEFNEFYVVNAYFPRAGDDLSRLGFKISFCGAIEKFLNELR--------SRK 139 Query: 204 PFVIAGDFNRKINY--------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 P ++ GDFN + + I ++R + Sbjct: 140 PVIVCGDFNIARDRLDSSFWDEKHPGLTPEERAWLSQLIKDGFIDAFRELHPNARVFTWR 199 Query: 250 NLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + IDY ++ + +I+ SDH P+ I+ Sbjct: 200 SYKERWRAMRIDYCMVSEELRGKVIKAEVL-----------SDVEGSDHVPVMIEIS 245 >gi|302686738|ref|XP_003033049.1| hypothetical protein SCHCODRAFT_81869 [Schizophyllum commune H4-8] gi|300106743|gb|EFI98146.1| hypothetical protein SCHCODRAFT_81869 [Schizophyllum commune H4-8] Length = 697 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 41/349 (11%), Positives = 85/349 (24%), Gaps = 95/349 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81 +++++WNIN + W LDADI+ QEM S N Sbjct: 1 MKIMTWNINGIRTIPQYHPWNGLKSHK--------DILDKLDADIICFQEMKSSRQNLPK 52 Query: 82 KVFPKNTWCIFYS-TERLINHSKRDSNNDIHT--------------AIAVRKKNVRVLQQ 126 V + F+S + +S A A + Sbjct: 53 DVAVPPGYTSFFSFPTKKAGYSGVAIYVKDQYTPFKVEDHLCGLANATASDADRISPALS 112 Query: 127 SYP------LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 SYP L +D + A + + +++++ + Y Sbjct: 113 SYPMHRFADLDDDEDDPIDFKSLDAEGRTLVADFGLFVLINVYCPNDGSEAQERMKYKMD 172 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR--------------------------- 213 + L + + ++ GD N Sbjct: 173 FHRM------LSVRVRGLIDEGREVIVVGDLNAVSDVGDHCEGALTVRKIIDEARKEGQE 226 Query: 214 ---------KINYLGNNDDFWKTIDPNDSLI-------RFPKEKDSRCNANK----NLRN 253 + + ++ + + ++ C K Sbjct: 227 VGEKEAEEMFYDTMPARRWLRDSLVEHGGPLVDVCKRFWPERKGMYTCWNTKISARASNY 286 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ ++ + + SDHCP+ +++ Sbjct: 287 GARIDFILVTPYLLPLIKHADIQ-----------PDVKGSDHCPVIVEF 324 >gi|266623165|ref|ZP_06116100.1| exodeoxyribonuclease III [Clostridium hathewayi DSM 13479] gi|288865076|gb|EFC97374.1| exodeoxyribonuclease III [Clostridium hathewayi DSM 13479] Length = 251 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 73/303 (24%), Gaps = 78/303 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +L+SWN+N L G Y K +DADI +QE + Sbjct: 3 KLISWNVNGLRACVGKGF---------------LDYFKEVDADIFCIQE-SKLSEGQIEL 46 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + + +++ + + A+ K + + D R Sbjct: 47 ELSGYHQYWNYAEKKGY----------SGTAMFTKEEPLSVAYGIGIEEHDHEGR----- 91 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ +V+ + + ++ E P Sbjct: 92 ----VITAEFSDYYVVTCYTPN-------SKDGLARLPYRMVWEDAFLRYLKG-LEEKKP 139 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + GD N + + + F R Sbjct: 140 VIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKFTDLLDAGFIDTFRWFYPDREEIYS 199 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF + + L+ + SDHCP+ + Sbjct: 200 WWSYRFSARSKNAGWRIDYFCVSEALKDRLVSADIHTEVL-----------GSDHCPVEL 248 Query: 301 DYD 303 + Sbjct: 249 VIE 251 >gi|28493711|ref|NP_787872.1| exodeoxyribonuclease III [Tropheryma whipplei str. Twist] gi|28572897|ref|NP_789677.1| exodeoxyribonuclease III [Tropheryma whipplei TW08/27] gi|28411030|emb|CAD67415.1| exodeoxyribonuclease III [Tropheryma whipplei TW08/27] gi|28476753|gb|AAO44841.1| exodeoxyribonuclease III [Tropheryma whipplei str. Twist] Length = 269 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 84/304 (27%), Gaps = 61/304 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +R+ +WN+N + + + + + DI+ LQE+ + A Sbjct: 1 MRIATWNVN----------------SIKTRLSQVLHWLTENEIDILALQEIKCRTNAFPA 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +VF ++ + AI + + + + G D + Sbjct: 45 EVFMEHGYFCAAHGL----------GGREGVAIVSKSEPQDITTDVEGIPGYDDRNTGKQ 94 Query: 142 NRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 ++ V+ + + + +++ + + S Y + I Sbjct: 95 DKSDVQARIIAATVGGVRLYSVYVPNGRDVHSPHYLYKLD------WLEGFATHIRGVIN 148 Query: 201 SLVPFVIAGDFNRKINYLGNNDD--------FWKTIDPNDSLIRFPKEKDSRCNA----- 247 + VIAGDFN + +ND F + Sbjct: 149 TEPNLVIAGDFNIVLFDSDSNDPRVQTDTDVFRTPHERQAFYNLLDLGLRDLVRPTEPEG 208 Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ + + D+ GK SDH P+ Sbjct: 209 FTFWDYRAGRFQKNEGLRIDHILGTDPIANSVRFAKIHHEQRKGDE----GKTPSDHVPV 264 Query: 299 SIDY 302 I+ Sbjct: 265 MIEL 268 >gi|227327919|ref|ZP_03831943.1| endonuclease/exonuclease/phosphatase family protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 381 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 32/275 (11%), Positives = 85/275 (30%), Gaps = 27/275 (9%) Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 ++ + L+ADI+ E+ + + + + ++ +I+ Sbjct: 111 SSQQRKNTGKVITLLNADILCAVEVENMDVLRDFNSQVLGKKKFNQFVMIDSPN--DPRG 168 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 I A R + ++ + A F+ +R +E+ ++ K+ + + Sbjct: 169 IDVACLTRYRIAQL---RTHIFDAGKQFNPVFSRDCLEVTLDAGLKQ-PIYILCNHFKSQ 224 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLGNNDDFWKTI 228 E Q++ + + + Q + VI GD N + + ++ Sbjct: 225 SGQTEEERQRGAEKRRDQSERVAEIVQQTYDLKKDYVVILGDLNEDSSNPWQSLAPLFSL 284 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIP----IDYFVMDQNAYKFLIQESFSEI------ 278 +I + + R + K +DY + ++ ++ Sbjct: 285 SDLHPVIDPERPEKERYIYYFSGGKKGARLNQLDYIFLSAPLHQAVVAWGIERRGIYNID 344 Query: 279 ----------LYNEDDIKSRGKRLSDHCPISIDYD 303 + ++ S SDH + ++ D Sbjct: 345 KIAAKEGAEPVTPLPEVTSWDTAASDHAALWVEVD 379 >gi|18147095|dbj|BAB82523.1| deoxyribonuclease I [Gloydius halys] Length = 282 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 94/309 (30%), Gaps = 38/309 (12%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++ +LAL V + +R+ ++NI + + + + + Sbjct: 1 MKTILLAL--LEVASLLQLTLSLRIGAFNIRAFG---------DKKLSNQTISSFIVRIL 49 Query: 62 KNLDADIVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 D+ +QE+ + AV K+ W + L++ +++ R+ Sbjct: 50 TAY--DLALIQEVRDADLSAVKKLMHLVNWASPNAFSYLVSKPLGHNSHKEQYLFIYRRD 107 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYS 178 V ++ Y G + + +R+ + + ++ ++ + L + Sbjct: 108 RVSPVESYYYKDGCEPCSNTTFSRKPFIVKFAVPQAEVKELVLVPLHA------------ 155 Query: 179 PSCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + + L D K ++ GDFN Y+ D + Sbjct: 156 -APEAAVTEIDALYDVYQDVKGRWGATDALLLGDFNAGCKYVRVEDWPSIRLRSIKDFQW 214 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFV-MDQNAYKFLIQESFSEILYNEDDIKS--RGKRLS 293 + N D V + + ++ + + + S +S Sbjct: 215 LIPDTADTTVTNTVCAY----DRIVAVGSKLRESILPATAKVDNFQKTLKLSSKDALAVS 270 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 271 DHFPVEVIL 279 >gi|307108235|gb|EFN56476.1| hypothetical protein CHLNCDRAFT_30910 [Chlorella variabilis] Length = 371 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 79/303 (26%), Gaps = 60/303 (19%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 ++SWN+ L + R + L A+ AD++ LQE+ + + Sbjct: 101 ILSWNVAGLRALLKKVKEVEAGTRNE-NIPTLVALAEAEQADVLCLQEIK----LQEDHC 155 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 E + ++ A+ + + D R Sbjct: 156 VEVLKELNLPEGWHVSWNCSRDKKGYSGTAIVSRQAPLSVSCGIGAEEHDGEGR------ 209 Query: 146 VELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ ++++ + + L L S + L+ P Sbjct: 210 ---VITAEFSAFYLVNCYTPNSGEGLKRLGYRVEKWDKDFSAYLKRLEQH--------KP 258 Query: 205 FVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GD N + + F + + F + + A Sbjct: 259 VVVTGDLNVAPAEIDIHSPKTNLKSAGFTPQERASFAANLLGQGFVDCF-RTQYPEAVAY 317 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +D+F++ Q + L SDHCP+ Sbjct: 318 TYWGYRFNARGNNKGWRLDHFLVSQQLHSSLHDC-----------YHLPAIMGSDHCPLG 366 Query: 300 IDY 302 + Sbjct: 367 LVL 369 >gi|300771561|ref|ZP_07081436.1| exodeoxyribonuclease III [Sphingobacterium spiritivorum ATCC 33861] gi|300761550|gb|EFK58371.1| exodeoxyribonuclease III [Sphingobacterium spiritivorum ATCC 33861] Length = 255 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 29/298 (9%), Positives = 74/298 (24%), Gaps = 62/298 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+N L + K+ +AD++ LQE+ + + Sbjct: 1 MKIITYNVNGLRAALKKGW---------------LDWLKSTNADVICLQEIKATPDLIPE 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ A+ K + G R Sbjct: 46 IALLEQLGYEHYWYPAQ-------KKGYSGTAIFTKVSPKRVE----YGCGHELYDFEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +K V+ + S ++ + Q + L I Sbjct: 95 I-----IRADFEKFSVMSTYFPSGTTGETRQTFKYQFLDDFQQYSDRLLKDIPNLIVCGD 149 Query: 204 PFVIA---------GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + N + I+ + + + + + Sbjct: 150 YNICHRAIDIHNPKSNANTSGFLPEEREWMENFINSG--YVDSFRHLNPEPHQYSWWSYR 207 Query: 255 ---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY ++ + + SDHCP+ ++ Sbjct: 208 AGARARNLGWRIDYNMVSAPLASQIEKS-----------YLLNDAVHSDHCPVVVEIS 254 >gi|328782712|ref|XP_623551.2| PREDICTED: recombination repair protein 1 [Apis mellifera] Length = 346 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 83/305 (27%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +++ SWN++ + + +Y DADIV LQE N + + Sbjct: 94 LKISSWNVSGIRAVIKKNG---------------IKYIAKEDADIVALQETKCDSNKLPE 138 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 N + ++ + + +A+ K + + D+ R Sbjct: 139 EIKLNGYHYYFLESKKSGY----------CGVALFTKEKPIDVKYGLNNSEFDNEGRL-- 186 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + +++++++ + + + L + Sbjct: 187 -------ITAEYLNFYLINVYVPNAGQKLVTLPKRLKWNEIFKTYVRNL--------DEK 231 Query: 203 VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P +I GD N + D + F + +A Sbjct: 232 KPVIICGDMNVAHKEIDLRNPKTNIKNAGFTIEERDGMTDFLATGFVDTFRALYPDKTDA 291 Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +DYF++ + + + +Y SDHCPI Sbjct: 292 YTFWSYFANARSKNIGWRLDYFLVSERIKDNVCDNVIRDKVY-----------GSDHCPI 340 Query: 299 SIDYD 303 + + Sbjct: 341 VLYIN 345 >gi|295085558|emb|CBK67081.1| Exonuclease III [Bacteroides xylanisolvens XB1A] Length = 361 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 88/305 (28%), Gaps = 67/305 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++++S+N+ + + E + Y + +ADI+ LQE + Sbjct: 99 GSIKILSYNVMSFNNLEKKDGKNP-----------VLSYLVDSNADIICLQEYNTATNKK 147 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + ++ F + H + +A K + + + Sbjct: 148 YLTEQDIKKAFKAYPYQSVHQQG----KGDVQLACFSKFPILSIHPIEYESNYNGSMKY- 202 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------- 178 ++ +N + +++ HL+S Y Sbjct: 203 -------VLNVNNDTLTLINNHLESNKLTKEDRGMYEDMIKDPNAKKVKTGLRQLIRKLA 255 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + ++ + QA + I + K ++ GDFN + + + +D F Sbjct: 256 EASAIRATQADSVAKTIAESKYPTT--IVCGDFNDG-SISYTHRILTQKLDD-----AFT 307 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + ID ++ N + + R + SDH PI Sbjct: 308 QSGKGLGISYNQNKFYFRIDNILISPNLKAY-------------NCTVDRSIKASDHYPI 354 Query: 299 SIDYD 303 Sbjct: 355 WCYIS 359 >gi|227547629|ref|ZP_03977678.1| exodeoxyribonuclease III [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227211884|gb|EEI79780.1| exodeoxyribonuclease III [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 286 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 78/311 (25%), Gaps = 57/311 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-AVA 81 + + + N+N + + + +A D+ +QE+ + V Sbjct: 2 TITITTSNVNGIRA---------------AKRKGIEDWAGKHAPDVWCMQEVRAPQEDVD 46 Query: 82 KVFPKNTWCIFYSTERLINHS----KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +F + + + + + + ++ +D Sbjct: 47 SIFGEFGFEYATAGKIASPSDLHSLNEVCRVKGRAGVGLLTDLEVTDKRYGLPSLGEDVD 106 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 S R + G I V +++ + DS + L + + + Sbjct: 107 S---GRWIETDVKTPQGYTITVACVYVHAGNTDDSTKMEQK--YRFLDTMLTRMGELRDE 161 Query: 198 KKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEK 241 V+ GDFN K +D + + Sbjct: 162 AAHGGKQAVLCGDFNIAHTPLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLA 221 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + IDY + + + D + R Sbjct: 222 GDIRGPYTWWSQRGRAFDNNVGWRIDYQFATPELAE-------TARGFVIDKAPTYELRW 274 Query: 293 SDHCPISIDYD 303 SDH P++I YD Sbjct: 275 SDHAPLTITYD 285 >gi|83643258|ref|YP_431693.1| extracellular nuclease [Hahella chejuensis KCTC 2396] gi|83631301|gb|ABC27268.1| predicted extracellular nuclease [Hahella chejuensis KCTC 2396] Length = 847 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 36/358 (10%), Positives = 85/358 (23%), Gaps = 68/358 (18%) Query: 14 VPCTASVAQKVRLVSWNINTLSE---QEGVSLWKNSVKRTTS-------DYTLLRQYAKN 63 + + + S+N+ ++ S+ ++ R + + + K Sbjct: 438 TATPEAALGNLAVASFNVLNYFNGVKKDDGSIDYSANPRGATTEEEFLLQQARIVKALKT 497 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-------TAIAV 116 LDAD+V L E+ + + ++ + + A+ Sbjct: 498 LDADVVGLMELENDGFGDDSAINTLVTALNNEIGEDAYTYVSTKDGGKPGTDQITVALIY 557 Query: 117 R----KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF----- 167 R + P + + +G+ V H KS Sbjct: 558 RAANVTPKGDAIVIDMPEQTLGSETAAMRPSLVQAFTHKASGQSFAVSINHFKSKRSSSA 617 Query: 168 ---CFLDSLENTYSPSCSLLSQQAQWLKDWITQ--------------KKESLVPFVIAGD 210 ++ L A L + + P + D Sbjct: 618 CDNSGPTDIDQMQGNCNPLRVSAAVTLGEALATLGLPERILILGDLNAYSKEDPISVLTD 677 Query: 211 FNRKINYLGNNDDFWKTIDPND--------SLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 +N + +D + D+ + + +D+ + Sbjct: 678 YNPATHGYTIKTAANTGMDAGAAVEVSKNYGYALVAETHDAEGFSYTYDGAQGSLDHILA 737 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRG-----------------KRLSDHCPISIDYD 303 A + ++ + E R SDH P+ + + Sbjct: 738 SSAAMEDIVDLDHWNVNSIEAYALQADGLFKYYKDSTGYFGVGPYRSSDHDPVVVTLN 795 >gi|75674284|ref|YP_316705.1| exodeoxyribonuclease III xth [Nitrobacter winogradskyi Nb-255] gi|74419154|gb|ABA03353.1| exodeoxyribonuclease III xth [Nitrobacter winogradskyi Nb-255] Length = 295 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 80/306 (26%), Gaps = 64/306 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + L +WNIN L+ ++ K D++ LQE Sbjct: 27 LTLTTWNIN----------------SVRLRIDLVARFLKAQRPDVLCLQETKCP---DDA 67 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + RL + + +AV K + + + +R Sbjct: 68 FPLKRFH------RLGYEHIALNGQKGYHGVAVVSKLP------FDASNIRTFCDKIDSR 115 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +L G ++ + D + +P + Q +K ++ Sbjct: 116 HVSVILGGEAGLAAPLVLHNFYVPAGGDIPDPALNPKFAHKLQFLDEMKGCAPLHPDNGD 175 Query: 204 PFVIAGDFNRKINYLG--NNDDFWKTI--------------DPNDSLIRFPKEKDSRCNA 247 V+ GD N + ++ K + D + + Sbjct: 176 RHVLVGDLNVAPHENDVWSHKQLLKIVSHTPIECEKLLGVQDRGNWVDIARARIPMSEKV 235 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + + + +R SDH P Sbjct: 236 YTWWSYRAADWVAANRGRRLDHIWVSEALRDGIRD-------FRITRDARGWERPSDHVP 288 Query: 298 ISIDYD 303 ++ + Sbjct: 289 VTAVIE 294 >gi|295101467|emb|CBK99012.1| exodeoxyribonuclease III [Faecalibacterium prausnitzii L2-6] Length = 250 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 80/303 (26%), Gaps = 77/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L LDAD+ +QE A Sbjct: 1 MKLISWNVNGLRACLTHDF---------------AASFAALDADVFSVQETKMQPGQADF 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ YS E ++ A K V + + + D R Sbjct: 46 APEGYTEYTYSAE-----------KKGYSGTACWCKTVPLSVTTGIGIEEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++++ + + + ++ + ++ Sbjct: 91 -----VLTLEYPESYLVNCYTPN-------SQDGLKRLDYRMTWEDAFRAYLLE-LDAKK 137 Query: 204 PFVIAGDFNRKINYLGNNDD----FWKTIDPNDSLIRFPKEKDSRCNA----------NK 249 P ++ GD N + + + ++ Sbjct: 138 PVILCGDLNVAHQEIDIKNAKTNRMSAGFTDQERAKMTELLAVGFTDSFRAIHPDEVKYS 197 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF++ + ++ SDHCP+ + Sbjct: 198 WWSYRFHAREKNAGWRIDYFIVSNRIADKIKAAEIHNEVF-----------GSDHCPVEL 246 Query: 301 DYD 303 D D Sbjct: 247 DID 249 >gi|256395196|ref|YP_003116760.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM 44928] gi|256361422|gb|ACU74919.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM 44928] Length = 236 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 38/283 (13%), Positives = 80/283 (28%), Gaps = 54/283 (19%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + VR++++N+ +L + D L + ++ D+V +QE + Sbjct: 3 ETVRILTYNVRSLRD----------------DRAALARVVRSCAPDVVCVQESPRFFGWQ 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + S ++ + + + NV V L K + Sbjct: 47 RAARTMAASFGLSVVAGGANASGN--------LLLAGPNVEVDAAEVLYLEHKRGYH--- 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + I + V HL + QA + + E Sbjct: 96 LRGMALAALRIGASRFTVASTHLSM-------------NLEQRVHQAGEVLGHLDGFAER 142 Query: 202 LVPF--VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 V+AGDFN + + D + + N +D Sbjct: 143 NQTTSRVLAGDFNSYPGSVEWGILTERLADAWMVSPMGDEFTSTGPNPY------QRLDA 196 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ++ + ++++ D+ SDH P+ Sbjct: 197 VFVSRDV-DVVRAGVPTDLIAKADEAL-----ASDHRPVLAVL 233 >gi|226529129|ref|NP_001146906.1| LOC100280514 [Zea mays] gi|195604980|gb|ACG24320.1| apurinic endonuclease-redox protein [Zea mays] Length = 510 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 37/313 (11%), Positives = 91/313 (29%), Gaps = 70/313 (22%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + + ++++SWN+N L + ++Q A+ D D++ LQE Sbjct: 241 PPLSKDTRALKIMSWNVNGLKALLKSRGF------------SVQQLAQREDFDVLCLQET 288 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 +V + ++ + ++ A+ + + + + Sbjct: 289 KMQEKDIEVIKDTLLDGYTNSFWT-----CSVSKLGYSGTAIISRVKPLSIKYGLGIPDH 343 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKD 193 D+ R +V + ++L ++ + L L + L + L+ Sbjct: 344 DTEGR---------VVTVEFDDFYLLTAYVPNSGDGLKRLTYRVTEWDPSLGNYMKELEK 394 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFP 238 P ++ GD N + +D + Sbjct: 395 --------SKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTNEERESFGTNFLSKGFVDTF 446 Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 +++ A + +DYF++ ++ + + D Sbjct: 447 RKQHPNVVAYSYWGYRHNARKTNKGWRLDYFLVSESIAEKVH-----------DSYILPD 495 Query: 290 KRLSDHCPISIDY 302 SDH P+ + Sbjct: 496 ISASDHSPLGLVL 508 >gi|195604738|gb|ACG24199.1| apurinic endonuclease-redox protein [Zea mays] Length = 505 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 37/313 (11%), Positives = 91/313 (29%), Gaps = 70/313 (22%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + + ++++SWN+N L + ++Q A+ D D++ LQE Sbjct: 236 PPLSKDTRALKIMSWNVNGLKALLKSRGF------------SVQQLAQREDFDVLCLQET 283 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 +V + ++ + ++ A+ + + + + Sbjct: 284 KMQEKDIEVIKDTLLDGYTNSFWT-----CSVSKLGYSGTAIISRVKPLSIKYGLGIPDH 338 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKD 193 D+ R +V + ++L ++ + L L + L + L+ Sbjct: 339 DTEGR---------VVTVEFDDFYLLTAYVPNSGDGLKRLTYRVTEWDPSLGNYMKELEK 389 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFP 238 P ++ GD N + +D + Sbjct: 390 --------SKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTNEERESFGTNFLSKGFVDTF 441 Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 +++ A + +DYF++ ++ + + D Sbjct: 442 RKQHPNVVAYSYWGYRHNARKTNKGWRLDYFLVSESIAEKVH-----------DSYILPD 490 Query: 290 KRLSDHCPISIDY 302 SDH P+ + Sbjct: 491 ISASDHSPLGLVL 503 >gi|89897437|ref|YP_520924.1| hypothetical protein DSY4691 [Desulfitobacterium hafniense Y51] gi|219670588|ref|YP_002461023.1| exodeoxyribonuclease III Xth [Desulfitobacterium hafniense DCB-2] gi|89336885|dbj|BAE86480.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219540848|gb|ACL22587.1| exodeoxyribonuclease III Xth [Desulfitobacterium hafniense DCB-2] Length = 250 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 78/303 (25%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + ADI LQE Sbjct: 1 MKLISWNVNGLRACLNKGFM---------------DFFQQEQADIFCLQETK-LQEEQIP 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + +++ + ++ AV K + D R Sbjct: 45 FQLEGYHAYWN----------FAQKKGYSGTAVFAKKEPLSVSYGIGQEEHDQEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + + + + + L+ Sbjct: 91 -----VITLEFDTFYLVTVYTPNSQRDLARLDYRMIWEAEFLGYLKNLEK--------SK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + N + F + A Sbjct: 138 PVILCGDLNVAHTEIDLKNPKTNRKNAGFTDEERAKFSELLKNGFIDTFRHFNPDKKEAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF + ++ L D + SDHCP+ Sbjct: 198 TWWSYMFNARANNAGWRIDYFCVSESLKNELK-----------DAMIYDQIMGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEI 249 >gi|320588962|gb|EFX01430.1| endonuclease exonuclease phosphatase family protein [Grosmannia clavigera kw1407] Length = 314 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 77/302 (25%), Gaps = 26/302 (8%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 T + A +RLV+ N+ + Q + + R + LR A D + LQE+ Sbjct: 13 TETSALPLRLVTLNVRY-ATQRPLEGEQPWRVRCPKVCSQLRFVATGQDGAFLCLQEVLH 71 Query: 77 YNAVAKV-----FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + + W + + S + +++ P Sbjct: 72 EQMLDIQGQLNDSDDDEWTYIGQGRQDGKTAGEYSPIFYRPRLWSCEQSRMYWLSETPER 131 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + A R L V+ + F S L+ + A Sbjct: 132 P-SCGWDAALERVVTVGLFRHRATAQPVVVMSTH---FDHLGVRARQESARLILRIAHAW 187 Query: 192 KD----WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + P + GDFN + D P + + Sbjct: 188 GRPAGSDSSSFSFLSRPVFLGGDFNSTPDDGAYKTMTAVPGGMVDIAGLVPPSRRYGNDE 247 Query: 248 NKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 ID+ + + + S + G LSDH + D Sbjct: 248 FTYTSFDEPDQTPKRIDFLFVQKPGHIRFPTFSVLANRF------DDGVFLSDHRAVVAD 301 Query: 302 YD 303 + Sbjct: 302 IE 303 >gi|189198097|ref|XP_001935386.1| endonuclease/exonuclease/phosphatase family protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187981334|gb|EDU47960.1| endonuclease/exonuclease/phosphatase family protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 607 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 40/335 (11%), Positives = 93/335 (27%), Gaps = 67/335 (20%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 ++ + + + ++N+ L+ + ++ ++ D++F+QE+ Sbjct: 290 VSSGGCEGLTVGAYNVENLAPNSTHHAGLAR---------HVVEFMRS--PDVIFVQEVQ 338 Query: 76 SYNAVAK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 N + + F + +I A Sbjct: 339 DDNGPTNDGVVSANLTLKTLTTAITLAGGPNY-TFTDIAPTDSQDGGQPGGNIRVAYLYN 397 Query: 118 KKNVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK--- 156 +VR+ + P + + +R+ + E+ GKK Sbjct: 398 PNHVRLYKPNPGGALDANEVLAGPALKYNPGRIEPANEAWTASRKPLVAQWEVIGKKQKN 457 Query: 157 ----IWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKESLVPFVIA 208 + +++H S S+ P +Q++ ++I + S + A Sbjct: 458 KPDVFFTVNVHFGSKGGSSSVHGDARPPVNGGVDDRLEQSRLTANFIKE---STARIITA 514 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 GDFN + + TI L N +D+ + + K Sbjct: 515 GDFNEFAFVEPLEE--YATISGLKDLDAVVGIDKVERYTYMFDMNAQQLDHMYVSPSLAK 572 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ++SDH P + Sbjct: 573 KSKAAYEHIH---VNTWPEFAAQVSDHDPSVAKLN 604 >gi|109809705|dbj|BAE96964.1| deoxyribonuclease I splicing isomer 1 [Homo sapiens] Length = 282 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 37/283 (13%), Positives = 84/283 (29%), Gaps = 30/283 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AV 80 +++ ++NI T E + + + Q DI +QE+ + AV Sbjct: 22 SLKIAAFNIQTFGET---------KMSNATLVSYIVQILSRY--DIALVQEVRDSHLTAV 70 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K+ + +++ ++ R V + Y G + + Sbjct: 71 GKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYDDGCEPCGNDT 130 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 NR + ++ I D++ + L Q +W Sbjct: 131 FNREPAIVRFFSQFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW---------- 180 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 L ++ GDFN +Y+ + + + + + + D Sbjct: 181 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAY----DRI 236 Query: 261 VMDQN-AYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISI 300 V+ ++ +S + S + +SDH P+ + Sbjct: 237 VVAGMLLRGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEV 279 >gi|134099932|ref|YP_001105593.1| AP endonuclease [Saccharopolyspora erythraea NRRL 2338] gi|291008673|ref|ZP_06566646.1| AP endonuclease [Saccharopolyspora erythraea NRRL 2338] gi|133912555|emb|CAM02668.1| AP endonuclease, family 1:exodeoxyribonuclease III xth [Saccharopolyspora erythraea NRRL 2338] Length = 265 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 82/304 (26%), Gaps = 64/304 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N T+ L ++ D++ +QE+ + Sbjct: 1 MRIATWNLN----------------SVTARLPRLLEWLSAASPDVLCVQELKCSS----- 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + + + R V + G + Sbjct: 40 ---DMFPVAEVSALGYEVAAYGTGRWNGVGVLSRVGLDEVRRGLPGEPGYLPEGAMFEVN 96 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + V G + + +++ + ++ Y + + L+D + +++ Sbjct: 97 EPRAIGVSCAG--VRLWSVYVPNGRYVGHPHYDYK------LRFLEALRDTVAAERDHGR 148 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 F + GDFN + +P+ Sbjct: 149 AFAVLGDFNIAPADDDVWDISAFAESTHVTEPERSALADLRAAGLADVYPRALKYDV-PF 207 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID D + D +GK SDH P+ Sbjct: 208 TYWDYRAGAFPKNMGMRIDLAYGDPRFTGAVSDSYV-------DREARKGKGASDHAPLV 260 Query: 300 IDYD 303 ID D Sbjct: 261 IDLD 264 >gi|323138553|ref|ZP_08073621.1| Endonuclease/exonuclease/phosphatase [Methylocystis sp. ATCC 49242] gi|322396187|gb|EFX98720.1| Endonuclease/exonuclease/phosphatase [Methylocystis sp. ATCC 49242] Length = 319 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 40/325 (12%), Positives = 90/325 (27%), Gaps = 53/325 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--- 78 ++RL ++N+ L + L ++DADI+ LQE+ + Sbjct: 2 NEMRLATFNLENL------DWAPGRPEAFARRRAALLPLLDDIDADILCLQEIDAQKTSK 55 Query: 79 -------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL- 130 A+ ++F + F+ R + +A+ + +++ Sbjct: 56 HGPRAYLALDRLFDGTRYAGFH---RFTSLRPGADTPADVHNLAILSRWPIRIRRQIHHE 112 Query: 131 -------------LGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENT 176 + +R + VE +G+ + V+++HL++ + Sbjct: 113 IVPPWPWPPPRDGDVTPPPIAIGWDRPMLYAAVELPDGRLLHVVNLHLRAPRPVPVPTAR 172 Query: 177 YSPSCSL-----------LSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDD 223 S QA + + E I GDFN + Sbjct: 173 GEGSSRALIEGQFVAALKREGQALEARLFAETIFDAEPDALLAICGDFNADEHDAPT-RL 231 Query: 224 FWKTIDPNDSLIRF-----PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 D + R + + + ID+ + + Sbjct: 232 LRGGRDEGEDAPRALLALEERVAPASRYTVIHAGRPTLIDHILASHALAAMWRSTAILNA 291 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303 ++ S H P+ ++ Sbjct: 292 GLQDEFYAKDPIDGSLHAPVMAMFE 316 >gi|209525496|ref|ZP_03274035.1| Endonuclease/exonuclease/phosphatase [Arthrospira maxima CS-328] gi|209493995|gb|EDZ94311.1| Endonuclease/exonuclease/phosphatase [Arthrospira maxima CS-328] Length = 501 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 38/322 (11%), Positives = 91/322 (28%), Gaps = 40/322 (12%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKN--SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 ++ +++ ++N+ L + + T + + ADI+ QE+ Sbjct: 174 SKTLKIGTFNLYNLVLPNRTYYETRQYTPELYHQKKTWISHQLATMQADIIGFQEIFDPE 233 Query: 79 AVAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A+ ++ ++ + K I + + +S + Sbjct: 234 ALQEILAATESYHNAHLITTNPTRDKPVVGLCSKLPIISWQIYDKFPPESQIDIEGTMIP 293 Query: 138 SRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYS----------PSCSLLSQ 186 +R + + +++ + V +HLKS S S Sbjct: 294 INHFSRPVLAVNIQLQDSLQCTVFVVHLKSQRPQIPEGVDSQDPVEKAKGKVRSLLRRSA 353 Query: 187 QAQWLKD-WITQKKESLVPFVIAGDFNRK---------INYLGNNDDFWKTIDPNDSLIR 236 +A L+ + S P +I GDFN + +K +D L Sbjct: 354 EATALRCIMLKTWSHSQNPIIILGDFNDSDLAITTKIMAGDISWKKTRFKPNHNHDELQL 413 Query: 237 FPKEKDSRCNANKNL-------RNKIPIDYFVMDQNA---------YKFLIQESFSEILY 280 + + + ++ +D+ ++ Q + ++ Sbjct: 414 YSVKDIQARQSYRDCYYTYMYNGYYETLDHILVSQELVLENSRQVGKVSYVALFNDHLVD 473 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 +S SDH + Sbjct: 474 QSLSDESIEPWKSDHGQVVATI 495 >gi|297172065|gb|ADI23048.1| metal-dependent hydrolase [uncultured Planctomycetales bacterium HF0770_03I01] Length = 278 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 89/305 (29%), Gaps = 57/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +S+NI ++ + + + K D+ LQE+ + + Sbjct: 1 MKFLSYNIQY-----------GKGQKGKHNLYRVAETIKET--DVACLQELEKFWQRSGF 47 Query: 84 FPKNTWCIFYSTERLINHS-------------KRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 + + + + + SN + + + +++PL Sbjct: 48 VDQAQILSEFLPKFYSVYGPALDMDASLKNQYGQISNQRRQFGNMILSRYPIISTRNFPL 107 Query: 131 L--GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 G + R +E ++ I G + S +S ++Q Sbjct: 108 PKQGTGPDPEHSIQRALLETVINIPGLGYTRVYSTHLSHRNPESRFPQIQLMMRRINQAP 167 Query: 189 QWLKDWITQKKESL----------VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 W + ++ F++ GD N K++ + + Sbjct: 168 HEQGAWSGEHTDAGWTEGEKPPMPQQFILMGDMNFKLDSKEYKEMV-----DTEDFYDAW 222 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 K D N + + ID+ + +N + + R SDH P+ Sbjct: 223 KSNDKDRGTNVDGDS---IDHCFVSKNLLPKIKR-----------TYIDRNITASDHWPL 268 Query: 299 SIDYD 303 ++ D Sbjct: 269 WMEMD 273 >gi|304395763|ref|ZP_07377646.1| Endonuclease/exonuclease/phosphatase [Pantoea sp. aB] gi|304357057|gb|EFM21421.1| Endonuclease/exonuclease/phosphatase [Pantoea sp. aB] Length = 253 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 34/286 (11%), Positives = 79/286 (27%), Gaps = 49/286 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++++ N + LR + +AD+VFLQE+ +A+ Sbjct: 9 SIKVLTINTHKGFAPFNRRF----------ILPELRDAVRATEADVVFLQEVMGTHAIHA 58 Query: 83 VFPK-----NTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + + T + + + H AV + ++ + A Sbjct: 59 LNHEAWPDSPHYEFLADTIWNDFAYGRNAVYPEGHHGNAVLSRFPITEYENRDISVAG-- 116 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + NR + + + + I + + Q + + + + Sbjct: 117 ---SENRGMLHCQIALPEPHGTLHVICVHLGL-----------KEAHRHAQMKKICEMVN 162 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 P V+AGDFN F + + Sbjct: 163 S-LPPDAPVVVAGDFND-----WQRRANSILKQGAGLKEVFSMKTGRPARTFPARFPILR 216 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + + + + LSDH P++++ Sbjct: 217 LDRIYVRNA-----------TVSHPWALPRKPWSHLSDHAPLAVEI 251 >gi|58336406|ref|YP_192991.1| exodeoxyribonuclease A [Lactobacillus acidophilus NCFM] gi|227902538|ref|ZP_04020343.1| exodeoxyribonuclease A [Lactobacillus acidophilus ATCC 4796] gi|58253723|gb|AAV41960.1| exodeoxyribonuclease A [Lactobacillus acidophilus NCFM] gi|227869627|gb|EEJ77048.1| exodeoxyribonuclease A [Lactobacillus acidophilus ATCC 4796] Length = 275 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 84/303 (27%), Gaps = 56/303 (18%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L+SWNI++L+ + + R + + + DI+ +QE Sbjct: 3 LISWNIDSLNAALTGTSARAEETR------QVLEKIHAKNPDIIAIQETKLKATGPTKKH 56 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + + S + + K SYP++GA + G Sbjct: 57 QEILAEKFPEYNYVWRSSEEPARKGYAGTMYLYKKDLTPIVSYPVIGAPEPMDCEGR--- 113 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++ + +V ++ + + ++ Q L + P Sbjct: 114 ---IITLEFNDFYVTQVYTPNSGSGLKRLSDRQVWDQKYTKYLQEL--------DKHKPV 162 Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + +GD+N + + F K + + Sbjct: 163 LASGDYNCAHTEIDLKHPNNNHHSAGFTDEERSGFTNLLNAGFTDTFRKVHGNITDVYSW 222 Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY+++ +++ + DHCPI + Sbjct: 223 WAQRVKTAKINNSGWRIDYWLVSNRIANKVVRSEMIDTEKRA-----------DHCPILL 271 Query: 301 DYD 303 + + Sbjct: 272 EIN 274 >gi|227878040|ref|ZP_03996030.1| exodeoxyribonuclease III [Lactobacillus crispatus JV-V01] gi|256843761|ref|ZP_05549248.1| exodeoxyribonuclease III [Lactobacillus crispatus 125-2-CHN] gi|256849680|ref|ZP_05555112.1| exodeoxyribonuclease A [Lactobacillus crispatus MV-1A-US] gi|262047734|ref|ZP_06020686.1| exodeoxyribonuclease III [Lactobacillus crispatus MV-3A-US] gi|293381982|ref|ZP_06627943.1| exodeoxyribonuclease III [Lactobacillus crispatus 214-1] gi|312977037|ref|ZP_07788786.1| exodeoxyribonuclease III [Lactobacillus crispatus CTV-05] gi|227862358|gb|EEJ69887.1| exodeoxyribonuclease III [Lactobacillus crispatus JV-V01] gi|256613666|gb|EEU18868.1| exodeoxyribonuclease III [Lactobacillus crispatus 125-2-CHN] gi|256713796|gb|EEU28785.1| exodeoxyribonuclease A [Lactobacillus crispatus MV-1A-US] gi|260571939|gb|EEX28507.1| exodeoxyribonuclease III [Lactobacillus crispatus MV-3A-US] gi|290921438|gb|EFD98479.1| exodeoxyribonuclease III [Lactobacillus crispatus 214-1] gi|310896365|gb|EFQ45430.1| exodeoxyribonuclease III [Lactobacillus crispatus CTV-05] Length = 275 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 81/303 (26%), Gaps = 56/303 (18%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L+SWNI++L+ + R +L + + + DI+ +QE Sbjct: 3 LISWNIDSLNA-----ALTGTSARAEETRQVLTK-IHDANPDIIAIQETKLRATGPTKKH 56 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 K + + S + + K S P++GA + G Sbjct: 57 KEVLAEKFPEYDYVWRSSEEPARKGYAGTMYLYKKGLTPAVSEPIIGAPEPMDHEGR--- 113 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++ + K +V ++ + + Q L + P Sbjct: 114 ---IITLEFDKCFVTQVYTPNSGSGLKRLAERQVWDQKYIEYLQKL--------DEKKPV 162 Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + +GD+N + + F K Sbjct: 163 LASGDYNCAHTEIDLKHPENNHHSAGFTDEERVDFTNLLNAGFTDTFRKVHGEITGVYSW 222 Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY+++ +++ + DHCPI + Sbjct: 223 WAQRVRTAKANNSGWRIDYWLVSNRIADKVVRSEMIDTGKRA-----------DHCPILL 271 Query: 301 DYD 303 + + Sbjct: 272 EIN 274 >gi|187918395|ref|YP_001883958.1| exodeoxyribonuclease III [Borrelia hermsii DAH] gi|119861243|gb|AAX17038.1| exodeoxyribonuclease III [Borrelia hermsii DAH] Length = 253 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 84/304 (27%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81 + L+SWN+N + G + ++ + + DI+ LQE + Sbjct: 1 MNLISWNVNGIRAVFGKGFF---------------EFIEKYNPDILCLQETKACKEQLPK 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + ++S S ++ +A+ K + L + Sbjct: 46 ELISIEGYYSYFSK----------SIIKGYSGVALYSKIEPI-----KLENMRMEIFDRE 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + + +++ + + + + L+ + Sbjct: 91 GRCLIA-----HYRDFILINAYFPN-------SQALRKRLNYKLEFLMSLESIANSFVTA 138 Query: 202 LVPFVIAGDFNRKINYLG--------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 VI GDFN + + W N + + + Sbjct: 139 GKNVVICGDFNIAHTEIDLSNPKSSRESAGFYIEETTWMDNFLNGGYVDTFRMFNGEPGN 198 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF++++ + + SDHCP+ Sbjct: 199 YTWWDYRTRARERNIGWRIDYFLVNKVFKSEVRDALILNEV-----------MGSDHCPV 247 Query: 299 SIDY 302 ++ Sbjct: 248 FLEL 251 >gi|255523264|ref|ZP_05390235.1| exodeoxyribonuclease III Xth [Clostridium carboxidivorans P7] gi|296186225|ref|ZP_06854630.1| exodeoxyribonuclease III [Clostridium carboxidivorans P7] gi|255513132|gb|EET89401.1| exodeoxyribonuclease III Xth [Clostridium carboxidivorans P7] gi|296049493|gb|EFG88922.1| exodeoxyribonuclease III [Clostridium carboxidivorans P7] Length = 252 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 81/304 (26%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L ++ K ++ADI +QE Sbjct: 1 MKLISWNVNGLRACVTKGF---------------LEFFKEVNADIFCIQESKLQEG-QIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + + D R Sbjct: 45 LELEGYHQYWN----------YAERKGYSGTAIFTKKKPLSFTYGIGIEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + + +D++ +++ Sbjct: 91 -----VITLEFDDFYMVTVYTPN-------SKDQLARLEYRMKWENDFRDYLKSLEKNK- 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + + A Sbjct: 138 PVIMCGDLNVAHKEIDLKNPKTNRKNAGFTDEEREKFTEFLSAGFIDTYRYFNPDKEGAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + L+ + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFCVSDCLKERLVSADIHTEV-----------MGSDHCPVE 246 Query: 300 IDYD 303 + Sbjct: 247 LVIS 250 >gi|167759302|ref|ZP_02431429.1| hypothetical protein CLOSCI_01649 [Clostridium scindens ATCC 35704] gi|167663176|gb|EDS07306.1| hypothetical protein CLOSCI_01649 [Clostridium scindens ATCC 35704] Length = 250 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 32/302 (10%), Positives = 76/302 (25%), Gaps = 78/302 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VSWN+N + ++ + DADI +QE Sbjct: 1 MKFVSWNVNGIRACVQKGFM---------------EFFQEADADIFCIQESKMQEG-QLE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + + D R Sbjct: 45 LETPGYHQYWN----------YAKKKGYSGTAIFTKQEPISVSYGIGIEEHDQEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + + + ++ + + + L++ Sbjct: 91 -----VITLEFEDYYFITVYTPNSQNELARLPYRMQWEDDFLAYLKKLEE--------AK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + ++ + F Sbjct: 138 PVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERAKFTSLVDAGFIDTFRYFYPDAQGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + ++ + L+ SDHCPI Sbjct: 198 SWWSYRFSARAKNAGWRIDYFCVSESLEERLVDAKILT-----------DVMGSDHCPIV 246 Query: 300 ID 301 ++ Sbjct: 247 LE 248 >gi|294674336|ref|YP_003574952.1| exodeoxyribonuclease III [Prevotella ruminicola 23] gi|294473057|gb|ADE82446.1| exodeoxyribonuclease III [Prevotella ruminicola 23] Length = 249 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 77/302 (25%), Gaps = 77/302 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L EG + LDAD LQE A Sbjct: 1 MKLISWNVNGLRACEGKGF---------------SDTFRELDADFFCLQETK-MQAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K+ + + D R Sbjct: 45 LAFEGYESYWNYAEKKGY----------SGTAIFTKHHPLSVTYGIGIDEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ + + + + + L ++ Sbjct: 91 -----VITLEMEDFYLVTCYTPNSQDGLKRLDYRMTWENDFRAYLKGL--------DAKK 137 Query: 204 PFVIAGDFNRKINYLGNNDD----FWKTIDPNDSLIRFPKEKDSRCN----------ANK 249 P ++ GD N + + + + Sbjct: 138 PVILCGDLNVAHQEIDLKNPKTNRMNAGFTDQEREQFSTLLASGFTDSFRYKYPEQVTYS 197 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYFV+ + + + SDHCP+ + Sbjct: 198 WWSYRFQARQKNAGWRIDYFVISDRLRERMDDARIHTQIL-----------GSDHCPVEL 246 Query: 301 DY 302 Sbjct: 247 TL 248 >gi|254479049|ref|ZP_05092404.1| exodeoxyribonuclease III [Carboxydibrachium pacificum DSM 12653] gi|214035005|gb|EEB75724.1| exodeoxyribonuclease III [Carboxydibrachium pacificum DSM 12653] Length = 258 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 78/301 (25%), Gaps = 75/301 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N L Y K +DADI +QE + Sbjct: 1 MKLVSWNVNGLRACLQKGFM---------------DYFKAIDADIFCIQETKLQENQKDI 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + ++ AV K + D R Sbjct: 46 EGLDLNGYYAFWN--------FAEKKGYSGTAVFTKYKPLSVSYGIGTPHHDKEGR---- 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +K ++++ + + + + L Sbjct: 94 -----VITLEYEKFFLVNTYTPNSQRGLTRLDYRMQWEEDFRSYLLKLDSL--------K 140 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F + +A Sbjct: 141 PVILCGDLNVAHQEIDIKNPAANRRNAGFTDEEREKMTILLNSGFIDTFRYFYPDKKDAY 200 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 +DYF++ + +LI + SDHCP+ Sbjct: 201 TWWSYMHNAREKNIGWRVDYFIVSERLKDYLIDSQIHSEV-----------MGSDHCPVV 249 Query: 300 I 300 + Sbjct: 250 L 250 >gi|161506683|ref|YP_001576633.1| exodeoxyribonuclease A [Lactobacillus helveticus DPC 4571] gi|260101796|ref|ZP_05752033.1| exodeoxyribonuclease [Lactobacillus helveticus DSM 20075] gi|160347672|gb|ABX26346.1| Exodeoxyribonuclease A [Lactobacillus helveticus DPC 4571] gi|260084387|gb|EEW68507.1| exodeoxyribonuclease [Lactobacillus helveticus DSM 20075] Length = 275 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 80/303 (26%), Gaps = 56/303 (18%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L+SWNI++L+ + + R + L+ DI+ +QE Sbjct: 3 LISWNIDSLNAALTGTSARAEETRG------VLDKIHALNPDIIAIQETKLRATGPTKKH 56 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + + S + + K S P +GA + G Sbjct: 57 QTILAEKFPEYDYVWRSSEEPARKGYAGTMYLYKKELTPAVSKPAIGAPEPMDEEGR--- 113 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++ + K +V ++ + + + L + P Sbjct: 114 ---IITLEFDKYFVTQVYTPNSGNGLKRLADRQVWDQKYIEYLKKLNE--------KKPV 162 Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + +GD+N + + F K + Sbjct: 163 LASGDYNCAHTEIDLKHPENNHHSAGFTDEERADFTNLLDAGFTDTFRKVNGNVEGVYSW 222 Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY+++ +++ + DHCPI + Sbjct: 223 WAQRVRTAKANNSGWRIDYWLVSNRIADKVVRSEMIDTGKRA-----------DHCPILL 271 Query: 301 DYD 303 + + Sbjct: 272 EIN 274 >gi|118138505|pdb|2ISI|A Chain A, Crystal Structure Of Ape1 From Homo Sapiens In A New Crystal Form Complexed With A Ligand gi|118138506|pdb|2ISI|B Chain B, Crystal Structure Of Ape1 From Homo Sapiens In A New Crystal Form Complexed With A Ligand gi|118138507|pdb|2ISI|C Chain C, Crystal Structure Of Ape1 From Homo Sapiens In A New Crystal Form Complexed With A Ligand Length = 317 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +++ SWN++ L + K DI+ LQE Sbjct: 52 TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 96 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K+ + S + S+ + ++ + + + + G Sbjct: 97 KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 146 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D R V ++ ++ + + + L Sbjct: 147 DEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 199 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 200 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 253 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ + L Sbjct: 254 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 304 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 305 --GSDHCPITL 313 >gi|60652565|gb|AAX28977.1| APEX nuclease 1 [synthetic construct] Length = 319 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +++ SWN++ L + K DI+ LQE Sbjct: 53 TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K+ + S + S+ + ++ + + + + G Sbjct: 98 KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D R V ++ ++ + + + L Sbjct: 148 DEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ + L Sbjct: 255 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 306 --GSDHCPITL 314 >gi|299037|gb|AAB26054.1| APEX nuclease=major apurinic/apyrimidinic endonuclease [human, Peptide, 317 aa] Length = 317 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +++ SWN++ L + K DI+ LQE Sbjct: 52 TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 96 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K+ + S + S+ + ++ + + + + G Sbjct: 97 KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 146 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D R V ++ ++ + + + L Sbjct: 147 DEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 199 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 200 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 253 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ + L Sbjct: 254 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 304 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 305 --GSDHCPITL 313 >gi|157830335|pdb|1BIX|A Chain A, The Crystal Structure Of The Human Dna Repair Endonuclease Hap1 Suggests The Recognition Of Extra-Helical Deoxyribose At Dna Abasic Sites Length = 287 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +++ SWN++ L + K DI+ LQE Sbjct: 22 TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 66 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K+ + S + S+ + ++ + + + + G Sbjct: 67 KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 116 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D R V ++ ++ + + + L Sbjct: 117 DEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 169 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 170 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 223 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ + L Sbjct: 224 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 274 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 275 --GSDHCPITL 283 >gi|32024|emb|CAA42437.1| HAP1 [Homo sapiens] Length = 318 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +++ SWN++ L + K DI+ LQE Sbjct: 53 TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K+ + S + S+ + ++ + + + + G Sbjct: 98 KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D R V ++ ++ + + + L Sbjct: 148 DEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQEAQGFGELLQAVPLADSFR 254 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ + L Sbjct: 255 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 306 --GSDHCPITL 314 >gi|219478|dbj|BAA14381.1| apurinic/apyrimidinic endonuclease [Homo sapiens] Length = 318 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +++ SWN++ L + K DI+ LQE Sbjct: 53 TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K+ + S + S+ + ++ + + + + G Sbjct: 98 KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D R V ++ ++ + + + L Sbjct: 148 DEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ + L Sbjct: 255 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 306 --GSDHCPITL 314 >gi|18375501|ref|NP_001632.2| DNA-(apurinic or apyrimidinic site) lyase [Homo sapiens] gi|18375503|ref|NP_542379.1| DNA-(apurinic or apyrimidinic site) lyase [Homo sapiens] gi|18375505|ref|NP_542380.1| DNA-(apurinic or apyrimidinic site) lyase [Homo sapiens] gi|113984|sp|P27695|APEX1_HUMAN RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName: Full=APEX nuclease; Short=APEN; AltName: Full=Apurinic-apyrimidinic endonuclease 1; Short=AP endonuclease 1; Short=APE-1; AltName: Full=REF-1; AltName: Full=Redox factor-1; Contains: RecName: Full=DNA-(apurinic or apyrimidinic site) lyase, mitochondrial gi|13399540|pdb|1E9N|A Chain A, A Second Divalent Metal Ion In The Active Site Of A New Crystal Form Of Human ApurinicAPYRIMIDINIC ENDONUCLEASE, Ape1, And Its Implications For The Catalytic Mechanism gi|13399541|pdb|1E9N|B Chain B, A Second Divalent Metal Ion In The Active Site Of A New Crystal Form Of Human ApurinicAPYRIMIDINIC ENDONUCLEASE, Ape1, And Its Implications For The Catalytic Mechanism gi|13399606|pdb|1HD7|A Chain A, A Second Divalent Metal Ion In The Active Site Of A New Crystal Form Of Human ApurinicAPYRIDINIMIC ENDONUCLEASE, Ape1, And Its Implications For The Catalytic Mechanism gi|19339022|gb|AAL86909.1|AF488551_1 APEX nuclease (multifunctional DNA repair enzyme) [Homo sapiens] gi|32022|emb|CAA46925.1| AP endonuclease 1 [Homo sapiens] gi|178747|gb|AAA58372.1| apurinic/apyrimidinic endonuclease [Homo sapiens] gi|183780|gb|AAA58629.1| apurinic/apyrimidinic endonuclease [Homo sapiens] gi|254069|gb|AAB22977.1| Ref-1 [Homo sapiens] gi|13436404|gb|AAH04979.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens] gi|28071072|emb|CAD61917.1| unnamed protein product [Homo sapiens] gi|54697126|gb|AAV38935.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens] gi|60655677|gb|AAX32402.1| APEX nuclease 1 [synthetic construct] gi|61358645|gb|AAX41600.1| APEX nuclease 1 [synthetic construct] gi|63100763|gb|AAH95428.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens] gi|119586867|gb|EAW66463.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a [Homo sapiens] gi|119586868|gb|EAW66464.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a [Homo sapiens] gi|119586869|gb|EAW66465.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a [Homo sapiens] gi|119586870|gb|EAW66466.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a [Homo sapiens] gi|119586871|gb|EAW66467.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a [Homo sapiens] gi|119586872|gb|EAW66468.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a [Homo sapiens] gi|158255636|dbj|BAF83789.1| unnamed protein product [Homo sapiens] Length = 318 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +++ SWN++ L + K DI+ LQE Sbjct: 53 TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K+ + S + S+ + ++ + + + + G Sbjct: 98 KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D R V ++ ++ + + + L Sbjct: 148 DEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ + L Sbjct: 255 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 306 --GSDHCPITL 314 >gi|86147336|ref|ZP_01065650.1| extracellular nuclease-related protein [Vibrio sp. MED222] gi|85834901|gb|EAQ53045.1| extracellular nuclease-related protein [Vibrio sp. MED222] Length = 864 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 47/372 (12%), Positives = 102/372 (27%), Gaps = 91/372 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R + + LDADI+ L E Sbjct: 469 GDLRIATFNVLNYFNSPFGGDANQHGNNRGANTITEFEMQQEKIVNAILRLDADIIGLME 528 Query: 74 MGSY-----NAVAKVFPK---------NTWCIFYSTERLINHSKRDSNND---IHTAIAV 116 + + +A+ ++ + + + + + I T + Sbjct: 529 IENNGFGEGSAIQQLVNQLNDRIERKKDRYTFVAVDSNEDGVTDEMDSIGTDVITTGVIY 588 Query: 117 RKKNVRVLQQSY------------PLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDI 162 RKK V++ G + R ++ ++ G +K+ V Sbjct: 589 RKKVVKLKNSRVIAMPSQQAPEVLDDSGKVIEDGKNYQRDSLAPTFKVKGTKEKLTVAIN 648 Query: 163 HLKS--------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL------ 202 H KS + + A L + + K Sbjct: 649 HFKSKGSKCWEDAAPVEQGGQGGVDADKQGSCENFRVAAAVALGEALDGIKGHKVILGDM 708 Query: 203 ------VPFVIAGDF-------------NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 P ++ D+ N I+ + D I N I +K Sbjct: 709 NSYGMEDPMLVLTDYSEEKYGKQIKAARNTYIDGVEQFGDNGAVITKNYGYINAVAQKHP 768 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK------------- 290 + +D+ ++ + ++ + I E + + Sbjct: 769 DSWSYSYNDEVGALDHLLISDSLKDMVVDATDWHINGGESKLLDYNEEFKGDLPKYQDHF 828 Query: 291 RLSDHCPISIDY 302 R SDH P ++ Sbjct: 829 RSSDHDPAVLEL 840 >gi|317504627|ref|ZP_07962594.1| AP endonuclease domain protein [Prevotella salivae DSM 15606] gi|315664248|gb|EFV03948.1| AP endonuclease domain protein [Prevotella salivae DSM 15606] Length = 363 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 33/303 (10%), Positives = 87/303 (28%), Gaps = 70/303 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + ++++S+N+ + + + + K + +Y K DI+ +QE + Sbjct: 99 KAIKVMSYNVWSFAGWKRYADGKFP----------ILEYIKVQHPDILCMQEAMTNEIGQ 148 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + + IA+ + V + + Sbjct: 149 HRVDAVLDKLYA-------YKDTLRYSQTSDCIALYSRYPIVSHERISYPSKGNLSG--- 198 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------- 178 V+I + +++ HL++ + + + Sbjct: 199 -----AFEVKIGNDTVIIVNNHLETTGLSNEDKREFKSLVKGDLKVTAAKQTSYRLVDKL 253 Query: 179 -PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + + + QA + +I+ + ++ GDFN + ID + Sbjct: 254 GDASAKRAVQADAVARYISNHLDKS--MIVCGDFNDTPISYARHTIAKNLID------CY 305 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + + ID+ + ++ + + S SDH P Sbjct: 306 VSTGNGPGVSYHAGGMYVRIDHIMCTKDWQPYACKVDHSIGE-------------SDHYP 352 Query: 298 ISI 300 I Sbjct: 353 IVC 355 >gi|319901536|ref|YP_004161264.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] gi|319416567|gb|ADV43678.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] Length = 336 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 39/342 (11%), Positives = 82/342 (23%), Gaps = 58/342 (16%) Query: 1 MIRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSE-------QEGVSLWKNSVKR 49 M + +L +F + + +N+ L + + L S K Sbjct: 1 MKKLLILFSFWFCAITLGAQNNSKRELYSVAFYNLENLFDTIHDTGKNDYEFLPDGSYKW 60 Query: 50 TTSDYTL-----------LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 T Y L + + + E+ + N + + + + Sbjct: 61 TAKKYQSKLRNMSKVLGSLSKELVPEGPAFIGVAEVENRNVLVDLVKQPAISNYEFIHYE 120 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 + I A+ K V + R + + ++ G+++ Sbjct: 121 GPDKR-----GIDCALLYDPKQFSVTGSKLVPSVPFKGDTVHLTRGFLIVDGQLAGERVC 175 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 V+ H S + ++Q + LKD K+ + ++ GD N Sbjct: 176 VIVNHWPSR-------GAKAEVRIHAARQVEALKDS-LLHKDKKLKLIVMGDMNDDPMDE 227 Query: 219 GN-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273 K + +D D V+ + K Sbjct: 228 SMQALGARKYAKKVRKGEFYNPWWETLEDKGVGTLLYQGKWNLFDQIVVSKPLLKSRKGL 287 Query: 274 SFSEI------------------LYNEDDIKSRGKRLSDHCP 297 + + SDH P Sbjct: 288 RYDHNEVFIRDYLIQQDGKYKGAPLRTHGGRIWLNGYSDHLP 329 >gi|294506961|ref|YP_003571019.1| Endonuclease/exonuclease/phosphatase family [Salinibacter ruber M8] gi|294343289|emb|CBH24067.1| Endonuclease/exonuclease/phosphatase family [Salinibacter ruber M8] Length = 361 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 80/302 (26%), Gaps = 25/302 (8%) Query: 19 SVAQKVRLVSWNINTL-SEQEGVSLWKNSVKRTTSDYTLLRQYAKNL----DADIVFLQE 73 A VR+ +WN+ + + + D ++ DAD++ LQE Sbjct: 62 PDADTVRVATWNLEHFVDGHDNPYIDAGTENTPAPDLKNRKRRVARALRRLDADLLVLQE 121 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 S + T S ++ + R V + + Sbjct: 122 AESEAFLQSFVE----DRLGDTGYRFATSVESPTWYMNVVLLSRYPLGVVRNYADVVTPI 177 Query: 134 KDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + G A L + + V + + + Q ++L Sbjct: 178 VGQEADNGEPAAQSLTNHRLWTADVRVAPNRVWTLIGAHLKAGRSAADRGWRIGQIRFLH 237 Query: 193 DWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWKTIDPN----------DSLIRFPKE 240 +++ ++ ++AGD N + P + Sbjct: 238 AELSRLRDDRPAAKMLVAGDLNSLPDSPELRLLLNNPDRPAPDSVQPGRVPGDIRFTDPL 297 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 D + +DY + + L+ S D + SDH P++ Sbjct: 298 SDRPTPTHPADNPVRQLDYLLPNPALSDRLVDGSVRVARPLPADSMAAT---SDHLPVAA 354 Query: 301 DY 302 + Sbjct: 355 SF 356 >gi|15888787|ref|NP_354468.1| hypothetical protein Atu1461 [Agrobacterium tumefaciens str. C58] gi|15156541|gb|AAK87253.1| hypothetical protein Atu1461 [Agrobacterium tumefaciens str. C58] Length = 269 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 81/276 (29%), Gaps = 50/276 (18%) Query: 55 TLLRQYAKNLDADIVFLQEMGSYNA------------------------VAKVFPKNTWC 90 L Y + D DI+ LQE+ A VA+ P + Sbjct: 17 DKLVPYIASSDPDILCLQEVVHTPAATQDWLSYRDHGVELPQRANFFRDVAEALPDHVAI 76 Query: 91 IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS---YPLLGAKDSFSRAGNRRAVE 147 + + + + + A VRK + Q + + A + +R A Sbjct: 77 FCPAAQGDLWQGETRYPSQFGLATFVRKSIAIIAQAQGFVHGVFSADGYGNHPRSRTAHA 136 Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207 + V V+ H+ + QA+ L ++ E ++ Sbjct: 137 IRVFDFTTGQPVVIAHMH-----GLRDLEGKHDIPARLHQAKRLVQFVKNIAEDGDRVIV 191 Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 GDFN + + ++ D + + + + DY +++ Sbjct: 192 CGDFNVLPDSR-----TFAVLNELDLVELVTTRGFTDTRTSHYAKPNRYADYLLVNPA-- 244 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ +SDHCP+ +++ Sbjct: 245 -------VKVSQFDVVRQPE----VSDHCPLLLEFS 269 >gi|310779700|ref|YP_003968032.1| exodeoxyribonuclease III Xth [Ilyobacter polytropus DSM 2926] gi|309749023|gb|ADO83684.1| exodeoxyribonuclease III Xth [Ilyobacter polytropus DSM 2926] Length = 253 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 82/306 (26%), Gaps = 81/306 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++SWN+N R + + LD DI+ LQE Sbjct: 1 MKILSWNVNG--------------IRAVEKKGAFQDVFEKLDPDILCLQETKASEEQLTD 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + F+ + ++ +A+ K + ++ + D Sbjct: 47 NIKKIPGYYSFF----------ESAVKKGYSGVALYSKTKPLSIKNMGIDIFDDEGRY-- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E + +++ + + CS L D+ E+ Sbjct: 95 --------IEAKFENFTLINCYFPNSQEKGKRLEYKLNFCS-------DLLDYCNSLVEN 139 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 V+ GD+N + K ++ I + Sbjct: 140 GENIVLCGDYNIAHQEIDLKNPKSNTKNPGFLPEEREWMSKFLNSG--YIDIFRYLYPNE 197 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + IDY ++++ + + + SDHC Sbjct: 198 IKYTWWSYRFKAREKNIGWRIDYHCVNKDFISTIKKVEILD-----------NITGSDHC 246 Query: 297 PISIDY 302 P+ I+ Sbjct: 247 PVLIEL 252 >gi|257870600|ref|ZP_05650253.1| endonuclease/exonuclease/phosphatase [Enterococcus gallinarum EG2] gi|257804764|gb|EEV33586.1| endonuclease/exonuclease/phosphatase [Enterococcus gallinarum EG2] Length = 255 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 84/285 (29%), Gaps = 37/285 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+ V + + + + D DI+ +QE+ VA + Sbjct: 1 MKVATYNLR-------VDTDYDKEWQWSYRADKVLALIDYHDWDILCVQEVR-PTQVADL 52 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ER + + + + + P + + + R Sbjct: 53 ARLTDYESV-TAERDGDGTGEGIGIYYKKTMFSKVDSGSFWLSLTPDVPSIHPEAEY-LR 110 Query: 144 RAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + ++ G V+D HL + + + + L D I Sbjct: 111 LCLWTVLRDRKGHDFLVIDTHLDN--------ISEIARFEGMKVILERLADKIAA----- 157 Query: 203 VPFVIAGDFNRKINYLGNNDD---FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 +P ++ GD N + + F + N+ P+ + IDY Sbjct: 158 LPVLLMGDLNAEAVERVHESLQTIFVNAKEQNEKGHYGPRGSYQNFDYQLPWNQLEEIDY 217 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + F I G+ SDH P+ D F Sbjct: 218 IY----------TKGFRIIKTGCLTDSCDGRFPSDHFPLEADLRF 252 >gi|241759074|ref|ZP_04757185.1| exodeoxyribonuclease III [Neisseria flavescens SK114] gi|319639647|ref|ZP_07994394.1| exodeoxyribonuclease [Neisseria mucosa C102] gi|241320676|gb|EER56929.1| exodeoxyribonuclease III [Neisseria flavescens SK114] gi|317399218|gb|EFV79892.1| exodeoxyribonuclease [Neisseria mucosa C102] Length = 259 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 79/307 (25%), Gaps = 78/307 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81 ++++S N+N + + +Y ADIV +QE+ + A Sbjct: 2 LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSD 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + ++ +S + +G Sbjct: 47 DMKNPHGMHGYWHCAEKRGYSGVAVYSKRKPDNV--------------QIGMGIEEFDRE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R V + K+ V+ ++L S + + + + + K Sbjct: 93 GRF-----VRCDFGKLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNE 140 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCN 246 V+ GD+N + + + + Sbjct: 141 GRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVP 200 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY ++ + + ++ SDH P Sbjct: 201 GYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAP 249 Query: 298 ISIDYDF 304 + ++YD+ Sbjct: 250 LVVEYDY 256 >gi|330812030|ref|YP_004356492.1| endonuclease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380138|gb|AEA71488.1| putative endonuclease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 269 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 37/286 (12%), Positives = 82/286 (28%), Gaps = 50/286 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----GSYNA 79 +++ N + LR+ +++ AD+VFLQE+ + Sbjct: 27 FTVLTVNTHKGFTALNRRF----------ILPELREAVRSVSADVVFLQEVHGTHEHHPQ 76 Query: 80 VAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +P F + + + A+ K + + + + Sbjct: 77 RYSNWPSMPQYEFLADSLWPQFAYGRNAVYPAGDHGNALLSKFQIIRHDNLDVSISGH-- 134 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 NR + ++ + G V I + +Q + L +++ Sbjct: 135 ---ENRGMLHSVLRLPGDGPQVHAICVHLGLREG-----------HRVEQLKLLCQRLSE 180 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 P ++AGDFN ++P F ++ + + + Sbjct: 181 -LPPDAPVIVAGDFNDWRGKASE------LLEPCGLREVFAEQWGKPARSFPARLPILRL 233 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + L + LSDH P+S++ + Sbjct: 234 DRIYVRN-----LKAHHPKVLNV------RPWSHLSDHAPLSVEIE 268 >gi|299141239|ref|ZP_07034376.1| exodeoxyribonuclease III [Prevotella oris C735] gi|298577199|gb|EFI49068.1| exodeoxyribonuclease III [Prevotella oris C735] Length = 250 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 83/303 (27%), Gaps = 77/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L G Q + L+AD LQE A Sbjct: 1 MKFISWNVNGLRACVGKDF---------------SQSFETLNADFFCLQETK-MQAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ ++ ++ A+ + + + D R Sbjct: 45 LQFPGYTSYWN----------YADKKGYSGTAIYARKEPIAVTYGIGIDEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + + ++ + + Sbjct: 91 -----VITLEYDNFFLVTVYTPN-------AQDGLRRLDYRMTWEDDFQAYL-HRLDEQK 137 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N + + + + + + Sbjct: 138 PVIVCGDLNVAHQEIDLKNPKSNRRNAGFTDEEREKMTQLLSHGFTDTFRTLYPEQVTYS 197 Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + R + IDYF++ L S ++ SDHCPI + Sbjct: 198 WWSYRFRAREKNAGWRIDYFLISDRLRPQLKDASIHTEIF-----------GSDHCPIEV 246 Query: 301 DYD 303 D + Sbjct: 247 DLE 249 >gi|297570782|ref|YP_003696556.1| LPXTG-motif cell wall anchor domain protein [Arcanobacterium haemolyticum DSM 20595] gi|296931129|gb|ADH91937.1| LPXTG-motif cell wall anchor domain protein [Arcanobacterium haemolyticum DSM 20595] Length = 1016 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 96/349 (27%), Gaps = 68/349 (19%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGV------------------SLWKNSVKRTTSDYT-- 55 + + S+N+ G + + + Sbjct: 501 APQFTEGNLSITSFNVLNYFTTLGEEFKCKGYSSHDGIQLTSNNTCNARGAASQKAFEMQ 560 Query: 56 --LLRQYAKNLDADIVFLQEMGSY---------------NAVAKVFPKNTWCIFYSTERL 98 + + LD+ IV L+E+ + A+ K + W S Sbjct: 561 QSKIVKAINALDSSIVGLEEIENSVKFGKDRDTALNALVAALNKDAGREKWVAVKSPAAD 620 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN---GK 155 + D + I A +K V+ + +S L+ K + +E GK Sbjct: 621 KLPA-LDKQDFIRLAFIYQKDKVKTVGESEVLIDGKQWAYARQPLAQKFVALENGKESGK 679 Query: 156 KIWVLDIHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211 ++ HLKS + + L Q + W+ + K + P I GD Sbjct: 680 PFVIVVNHLKSKGSDKDPGHPDDGFQGNNNHLRVLQVTEMAQWVAK-KFADEPVFILGDL 738 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N T++ ++ + ++ + +D+ + + A + Sbjct: 739 NSYTFEDP-----LMTLEKEFGYTSIAQKTGIKNHSYQYGGLVGSLDHALGNPAAMAMVK 793 Query: 272 QESFSEILYNEDDIKSRGK-----------------RLSDHCPISIDYD 303 + E + R SDH PI + + Sbjct: 794 AADVWNVNAMEPLAFEYSRYNYNINYKNLFDAASPFRSSDHDPIKVAIE 842 >gi|295397847|ref|ZP_06807910.1| exodeoxyribonuclease III [Aerococcus viridans ATCC 11563] gi|294973892|gb|EFG49656.1| exodeoxyribonuclease III [Aerococcus viridans ATCC 11563] Length = 275 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 32/305 (10%), Positives = 83/305 (27%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + R + + + D++ +QE Sbjct: 1 MKLISWNIDSLNAALTGASPRAELSR------EVLKMIREHQPDVIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ S + + K + ++P +GA + G Sbjct: 55 KHLDIIEADVPDYKVVWVSSVEPARKGYAGTMFLYKKDYTPEVTFPQIGAPTTMDYEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V +++ + + + L ++ Sbjct: 114 -----MITLEFTDFYVTNVYTPNAGSALARLEDRQVWDVQYANYLADL--------DAKK 160 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GDFN + + F Sbjct: 161 PVIACGDFNVAHTEIDLAHPKNNHFSAGFTDEERAGFTNLLNRGFTDTFRHIHGDVEGVY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY+++ + + + + DH PI Sbjct: 221 TWWAQRVKTSKINNSGWRIDYWLVSDRIADKVQKSEMLDSGTRQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 LLEID 274 >gi|328785734|ref|XP_395633.4| PREDICTED: putative neutral sphingomyelinase-like [Apis mellifera] Length = 393 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 81/289 (28%), Gaps = 34/289 (11%) Query: 30 NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89 NI TL+ + N R T + + DI+ LQE+ S N + K Sbjct: 8 NILTLNCWGIPYVSPNRSAR----MTAIADKFATENYDIICLQEIWSINDFKMIKAK--- 60 Query: 90 CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAKDSFSRAGNRR 144 T+ + +S + I + + + K + G + Sbjct: 61 -----TQEQLPYSHYFYSGVIGSGLCILSKFPIKDVIFHKWPLNGYVHKIHHGDWFGGKG 115 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++I+ + V HL + + QA +I Sbjct: 116 VGLCKLQIHNWNVNVYIAHLHA-----EYNRHNDEYIAHRVLQAFDTAQFIRMTSGGADS 170 Query: 205 FVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 ++ GD N + L D + + + +AN K Sbjct: 171 TILGGDLNTEPQDLVYRIICGVAGLTDACSNSSSNLGTNECANNSYTNTKHANTFPDGK- 229 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ + + +F + I + SDH I + F Sbjct: 230 RIDHILYQGTKNVKIEIINFQHPF--PNRIPYKNFSYSDHEAIMATFKF 276 >gi|325180868|emb|CCA15278.1| DNA(apurinic or apyrimidinic site) lyase putative [Albugo laibachii Nc14] Length = 475 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 81/320 (25%), Gaps = 61/320 (19%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAK 82 ++VSWN+N L D L + L A I+ QE + + Sbjct: 5 KIVSWNVNGLRAI------------LQRDKVKLNDFLHALQASIICFQETKLTRSELDEE 52 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY-------PLLGAKD 135 + + FYS R+ N VR + + Sbjct: 53 LACPKDFDAFYSHCRVRNGYSGVV-------TFVRSDLPTIAAEEGLTGMWTRKDTIGHV 105 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + A + +E G+ + + + L I Sbjct: 106 NMGDAEIPSQMLSELESEGRSVITDHGAFILIN-VYCPAIRNEERLEYKIAFHELLTRRI 164 Query: 196 TQKKESLVPFVIAGDFNRKINYLGN----------------NDDFWKTIDPNDSLIR--- 236 +++ V+ GD N + + + I L Sbjct: 165 QTLRKASKRVVLVGDLNVASKRIDHCEPKASEFGEFEAHPCRKWLHRLISSPAPLRDIYR 224 Query: 237 ---FPKEKDSRCNANKN----LRNKIPIDYFVMDQNAYKFLIQE------SFSEILYNED 283 K+K C IDY ++D+ ++ S E Sbjct: 225 KLYPDKKKAFTCWNTATMARKNNYGTRIDYILVDEKLQDSVLSCRSFAFKSILEKWLTLA 284 Query: 284 DIKSRGKRLSDHCPISIDYD 303 + SDHCP+ + D Sbjct: 285 IRLDPERLGSDHCPVFAEID 304 >gi|300742521|ref|ZP_07072542.1| exodeoxyribonuclease III [Rothia dentocariosa M567] gi|300381706|gb|EFJ78268.1| exodeoxyribonuclease III [Rothia dentocariosa M567] Length = 278 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 25/305 (8%), Positives = 73/305 (23%), Gaps = 66/305 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N + + + + D++ LQE + + Sbjct: 12 MKIATWNVN----------------SIRARADRIEDWLDKTEVDVLALQETKTKDE---- 51 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ + + Sbjct: 52 ------TFPFELFEFLGYEVAHYGLNQWNGVAIASRVGLDSVERT-FPNQPAFGKPGDPA 104 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KES 201 + + + +++ + L Y + + L+ + + Sbjct: 105 EVEARAIGATCNGVRIWSLYVPNGRGLTDPHMAYK------MEWMRQLRTNVNGWLHADP 158 Query: 202 LVPFVIAGDFNRKIN------------------YLGNNDDFWKTIDPNDSLIRFPKEKDS 243 F + GD+N + F+ ++ + Sbjct: 159 AAQFALVGDWNVAPEDTDVWDIDFFRENDLTHVSAPEREAFYALLNDEGLIDPVRPYTQG 218 Query: 244 RCNANKNLRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + ID+ + + D + G SDH P Sbjct: 219 EYTYWDYQAGRFSKNEGMRIDFQLCSPALAARVENAWI-------DREEREGDGASDHTP 271 Query: 298 ISIDY 302 + I+ Sbjct: 272 VVIEL 276 >gi|332827620|gb|EGK00362.1| hypothetical protein HMPREF9455_03315 [Dysgonomonas gadei ATCC BAA-286] Length = 306 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 39/337 (11%), Positives = 77/337 (22%), Gaps = 67/337 (19%) Query: 1 MIRKYVLALVFFLVPCTASVAQ--------KVRLVSWNINTLSEQEGVSLWKNSVKRTTS 52 M L L+ F++ T + + + ++S+NI + Sbjct: 1 MKNISGLILLSFILLTTTASCRNKQNSEPVSLNVMSFNIWMGGGKS-------------- 46 Query: 53 DYTLLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 + N ADIV +QE N ++ W + Sbjct: 47 -IEATAEVLVNSGADIVGIQEATRKDQNTAKQIADSLNWHSYVYGRST------------ 93 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 A+ K V L+ + + I FL Sbjct: 94 ----AIISKYPIVDTSENKQGVKIKIDDSHFVWMFNVHLIHCPYEPYQLNGIEYCGAPFL 149 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 + + + ++ + I ++ P + GDFN + + Sbjct: 150 STEAEAIESAKNSREKEVKSNIADILTVQKEGYPVFLTGDFNEPSCLDWTDKAAEAKLCK 209 Query: 231 NDSLIR-----------------FPKEKDSRCNANK-------NLRNKIPIDYFVMDQNA 266 +P E + + ID+ Sbjct: 210 TAVAWPSTKAFIDSGLKDSYREKYPDEAKNPGHTWTTLPETKAYTEVPDRIDFVFFSGEN 269 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K + S + SDH + + Sbjct: 270 IKL--ENSQIVGEESPFSNIKFNNYPSDHRAVLSTFT 304 >gi|226949104|ref|YP_002804195.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A2 str. Kyoto] gi|226842810|gb|ACO85476.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A2 str. Kyoto] Length = 360 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 101/311 (32%), Gaps = 44/311 (14%) Query: 22 QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +V++NI G +S ++T + + + K ++ +FLQE Sbjct: 61 DSFSIVTFNIGYGGMDDKQDFFMDGGKGSRSSSKEKTIENMREITSFLKKDNSSFIFLQE 120 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV------LQQS 127 + + + + F + + ++ + + S + + + K + V L + Sbjct: 121 VDTNS--TRSFRIDQYDYLKNSLKAYSSSMALNYKTPWVPVPILKPHGTVNAGLANLSKY 178 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 + + + ++ + V + + ++S + Y + QQ Sbjct: 179 KINSATRYQYPGKESWPRQLAELDRCFLESRVSLENNRELVLINSHLSAYDKGGKIRKQQ 238 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---------NDDFWKTIDP--NDSLIR 236 +LK++I ++ + ++ GD+N I D K + + Sbjct: 239 LSFLKNYIIKEYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKW 298 Query: 237 FPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID F++ N ++ Y+ + + Sbjct: 299 VADKNVPTTRTDATPYKKGENFTAVIDGFLVSDNIEATSVKA------YSMEFKNT---- 348 Query: 292 LSDHCPISIDY 302 DH P+ +++ Sbjct: 349 --DHNPVKMEF 357 >gi|89075216|ref|ZP_01161647.1| hypothetical extracellular nuclease [Photobacterium sp. SKA34] gi|89049038|gb|EAR54605.1| hypothetical extracellular nuclease [Photobacterium sp. SKA34] Length = 777 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 48/383 (12%), Positives = 97/383 (25%), Gaps = 105/383 (27%) Query: 24 VRLVSWNINTLSE---QEGVSLWKNSVKRTTSDYTL------------------LRQYAK 62 +++ S+N+ G SL + +D + Sbjct: 298 LKVASFNVLNFFTSHSDIGGSLNPTCKDQADADAAKGCNRGAKTAAEFELQRTKIVNALT 357 Query: 63 NLDADIVFLQEMGSY-----NAVAKVFPK---------NTWCIFYSTERLINHSKRDSNN 108 +DADI+ + EM + +A+ + + + + ++ N K ++ Sbjct: 358 AMDADIIGIMEMENNGFGKNSAIKNLVDELNLHFNDSSDHYQFVEINDKDKNKGKFFGSD 417 Query: 109 DIHTAIAVRKKN--VRVLQQSYPLLGAKDSFSRAG---------NRRAVELLVEINGKK- 156 I A+ R Q + S + A R + ING K Sbjct: 418 AIMVAMLYRPSKVTPIKDAQVIRMPSQHMSATNAEGEGVKIDAYQRDTLLQQFAINGAKK 477 Query: 157 ---IWVLDIHLKSFCF-----------LDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + ++ HLKS +N A L D + Sbjct: 478 KSQLTIVVNHLKSKGSGCYEDWLNEQKDKDYQNIQGNCNDFRVSAAMVLADRLKTISGD- 536 Query: 203 VPFVIAGDFNRKINYLGNN---------------DDFWKTIDPN-------------DSL 234 ++ GD N I + Sbjct: 537 --VLVMGDMNAYGMEDPIRVLTQYKPKQYQRKIMSASGTFIGDQSLHPEGIVASKGLGLV 594 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291 K + + +D+ + ++ K + I E+ + + Sbjct: 595 NLATKWHGADSYSYSYNGELGSLDHALASRSLLKKVRGIEDWHINSVENSLFEYSNKYSG 654 Query: 292 ----------LSDHCPISIDYDF 304 SDH P+ I++ + Sbjct: 655 DLVKSTGPYSASDHDPVIINFAY 677 >gi|309812281|ref|ZP_07706036.1| exodeoxyribonuclease III [Dermacoccus sp. Ellin185] gi|308433586|gb|EFP57463.1| exodeoxyribonuclease III [Dermacoccus sp. Ellin185] Length = 262 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 29/306 (9%), Positives = 72/306 (23%), Gaps = 70/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + + + D D++ +QE + Sbjct: 1 MRIATWNVN----------------SIRTRVDRVIAFLERGDVDVLAMQETKCKDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + Q +G +D Sbjct: 41 ------QFPMARFEEAGYEVAHHGLNQWNGVAIASRVGLEDVQ----IGFEDMPGFGDPI 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202 A + + + +++ + + Y L+ + Sbjct: 91 AAEARAIAATCDGVRMWSLYVPNGREIGHPHYEYKLD------WLAALRADGEKWLTENP 144 Query: 203 -VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + GD+N D ++ + + Sbjct: 145 EAQIALTGDWNIAPRDEDVWDPAFFEGKTHVTQPERDAFQAMIDTGYADVVRPHTNEP-R 203 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 ID+ + + D + +GK SDH P Sbjct: 204 TYTYWDYTQLRFPKKQGMRIDFALCSPALAGRVQGAVI-------DRDERKGKGASDHAP 256 Query: 298 ISIDYD 303 + + D Sbjct: 257 VIVQLD 262 >gi|296313703|ref|ZP_06863644.1| exodeoxyribonuclease III [Neisseria polysaccharea ATCC 43768] gi|296839722|gb|EFH23660.1| exodeoxyribonuclease III [Neisseria polysaccharea ATCC 43768] Length = 259 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 79/307 (25%), Gaps = 78/307 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81 ++++S N+N + + +Y ADIV +QE+ + A A Sbjct: 2 LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + ++ +S +G Sbjct: 47 DMKNPHGMHGYWHCAEKRGYSGVAVYGKRKPDNV--------------QIGMGIEEFDRE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R V + ++ V+ ++L S + + + + + K Sbjct: 93 GRF-----VRCDFGRLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNE 140 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCN 246 V+ GD+N + + + + Sbjct: 141 GRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDNP 200 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY ++ + + ++ SDH P Sbjct: 201 GYTWWSNRGQAYAKDVGWRIDYQMVTPELAVKAVSAHV-----------YKDEKFSDHAP 249 Query: 298 ISIDYDF 304 + ++YD+ Sbjct: 250 LVVEYDY 256 >gi|19527895|gb|AAL90062.1| AT13596p [Drosophila melanogaster] Length = 603 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 38/336 (11%), Positives = 86/336 (25%), Gaps = 46/336 (13%) Query: 14 VPCTASVAQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 + S + ++R+VS+N+ + S + L ++ Sbjct: 266 TTNSLSESNEIRVVSYNLLADLYASSDYAGSTLFSYCPAKYLQIDYRKPLFINEIIGYNS 325 Query: 67 DIVFLQEMGSY---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 DI+ LQE+ + ++ + + ++ + ++ + + Sbjct: 326 DILCLQEVDQRIFDFDLKEILEQPPYNYHGIMAPKGKCAEGVAIFFRNSRFDLLDSQILH 385 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELL-------------VEINGKKIWVLDIHLKSFCFL 170 L + P+L +S A + I G +VL + + Sbjct: 386 LGSNIPVLPVFESLWNKIKVNAQLAERICERSTTLQTCLLRIKGTDNYVLVANTHLYFHP 445 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQK---KESLVPFVIAGDFNRKINYLGNNDDFWKT 227 D+ + Q + I + + GDFN G + Sbjct: 446 DADHIRLLQMGFSMLFVEQSINKAIKDFNIGSPKNIGLIFCGDFNSVP-ECGIYKLMTEQ 504 Query: 228 IDPNDSLIRFPKE------------------KDSRCNANKNLRNKIPIDYFVMDQNAYKF 269 + + + +DY + ++ Sbjct: 505 LAEKTLEDWQSNAEQAVSNVELAQPFKMGSAYGAPEYTHYTTLFAGCLDYVFYQNDRFEL 564 Query: 270 LIQESF-SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 L +E + SDH + D F Sbjct: 565 LKVVPLPTEEELKANTAIPSAVFPSDHVALVADLKF 600 >gi|53715705|ref|YP_101697.1| hypothetical protein BF4425 [Bacteroides fragilis YCH46] gi|60683643|ref|YP_213787.1| hypothetical protein BF4223 [Bacteroides fragilis NCTC 9343] gi|253566481|ref|ZP_04843934.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|52218570|dbj|BAD51163.1| conserved hypothetical protein [Bacteroides fragilis YCH46] gi|60495077|emb|CAH09896.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343] gi|251944653|gb|EES85128.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|301165155|emb|CBW24725.1| conserved hypothetical protein [Bacteroides fragilis 638R] Length = 365 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 87/302 (28%), Gaps = 64/302 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++L+S+NI + + + + Y KN +ADIV +QE Sbjct: 99 NSIKLLSYNIMSFGNMKKENGQNP-----------ILNYIKNSNADIVCMQEYAGSETAK 147 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 N K+ + +A K + + R+ Sbjct: 148 IHLSNKEIRQALKDYPYHN-IKQVGKTGAGSQLACYSKFPILSAR--------MLDYRSN 198 Query: 142 NRRAVELLVEINGKKIWVLDIHLKS-----------------------FCFLDSLENTYS 178 ++ ++I + +++ HL+S + L N + Sbjct: 199 YNGSMVYEIKIGKDTVLLINNHLESNKLTREDKVVYEDMLKDPKAGKVKSGVRQLVNKLA 258 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + ++ S QA+ + I ++ GDFN + + D F Sbjct: 259 EASAIRSAQARTIAQEIAHSPYPS--VIVCGDFNDSPISYAHR------VISQDMDDAFT 310 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + ID ++ +N + +D SDH PI Sbjct: 311 ESGCGLGISYNQNKFYFRIDNILVSKNL----KASGCTVDNSIKD---------SDHYPI 357 Query: 299 SI 300 Sbjct: 358 WC 359 >gi|260592674|ref|ZP_05858132.1| exodeoxyribonuclease III [Prevotella veroralis F0319] gi|260535444|gb|EEX18061.1| exodeoxyribonuclease III [Prevotella veroralis F0319] Length = 249 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 84/302 (27%), Gaps = 77/302 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L G Q K+ +AD LQE A Sbjct: 1 MKLISWNVNGLRACVGKDFE---------------QQFKDFNADFFCLQETK-MQAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ ++ ++ A+ ++ + + D R Sbjct: 45 LSFPGYESYWN----------YADKKGYSGTAIFTRHKPLSVTYGIDIDEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + + + ++ K + + Sbjct: 91 -----VITLEMDDFYLVTVYTPN-------SQDELRRLEYRMKWEDDFQSYL-HKLDEIK 137 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N + + + + Sbjct: 138 PVIVCGDMNVAHQEIDLKNPKTNRRNAGFTDEERQKMTQLLSNGFIDTFRTLYPEQVTYS 197 Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + R + IDYF++ + L+ + SDHCPI I Sbjct: 198 WWSYRFRAREKNTGWRIDYFLISERLRDRLVDAKIHTEI-----------MGSDHCPIEI 246 Query: 301 DY 302 D Sbjct: 247 DL 248 >gi|304407353|ref|ZP_07389006.1| exodeoxyribonuclease III Xth [Paenibacillus curdlanolyticus YK9] gi|304343794|gb|EFM09635.1| exodeoxyribonuclease III Xth [Paenibacillus curdlanolyticus YK9] Length = 255 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 80/304 (26%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L Y DADI LQE ++ Sbjct: 1 MKLISWNVNGLRACVTKGFM---------------DYFNESDADIFCLQETKLQAGQIEL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ + ++ AV K + + ++D Sbjct: 46 PLEGRYSQYWN----------YAVKKGYSGTAVFTKVEPLTVRYGIEEDSEDEGR----- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++++++ + S L ++ Sbjct: 91 -----ILTLEFDRFYLVNVYTPNAKRDLSRLGYRLEWEDRFRAYLLEL--------DAQK 137 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F R +A Sbjct: 138 PVIVCGDLNVAHQEIDLKNAKSNHGNSGFTTEERGKMTDLLESGFIDTFRHLHPERDDAF 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ + D SDHCP+ Sbjct: 198 SWWSFMPKVRERNIGWRIDYFLASARLA-----------PHVTDAGIDSAILGSDHCPVM 246 Query: 300 IDYD 303 + + Sbjct: 247 VQLE 250 >gi|237740619|ref|ZP_04571100.1| dnase I homologous protein dhp2 precursor [Fusobacterium sp. 2_1_31] gi|229422636|gb|EEO37683.1| dnase I homologous protein dhp2 precursor [Fusobacterium sp. 2_1_31] Length = 286 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 94/308 (30%), Gaps = 39/308 (12%) Query: 1 MIRKYVLA----LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 + +K L L+ F + T S A + + S+NI L D Sbjct: 7 LKKKLSLFIVSVLMIFTMFSTISSADEAYIASFNILRLGA-------------AEKDMVQ 53 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIA 115 + + D+V L E+ + + ++ + + E I+ S+ + Sbjct: 54 TAKLLQGF--DLVGLVEVINKKGIEELVDELNRQSPNTWEYHISPFGVGSSKYKEYFGYV 111 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 +K V+ ++ K S R +I ++ +H Sbjct: 112 YKKDKVKFIKSEGFYKDGKSSL----LREPYGATFKIGNFDFTLVLVHTIYG-------- 159 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 + + + D+ K + +IAGDFN + +K D I Sbjct: 160 NNESQRKAENFKMVDVYDYFQDKDKKENDILIAGDFNL-YALDESFRPMYKHRDKITYAI 218 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + N D F Q S + ++E D + + +SDH Sbjct: 219 DPAIKTTIGTKGRANSY-----DNFFFSQKYTTEFTGSS-GALDFSEKDPQLMRQIISDH 272 Query: 296 CPISIDYD 303 P+ I + Sbjct: 273 IPVFIVVE 280 >gi|310659330|ref|YP_003937051.1| exodeoxyribonuclease III [Clostridium sticklandii DSM 519] gi|308826108|emb|CBH22146.1| exodeoxyribonuclease III [Clostridium sticklandii] Length = 250 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 32/303 (10%), Positives = 75/303 (24%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + +Y ++ADI +QE + Sbjct: 1 MKLISWNVNGIRACVKKGF---------------LEYFDEVEADIFCIQETKLQEGQIDL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + ++ AV K + + D+ R Sbjct: 46 MLNDYEQYW-----------NYAEKKGYSGTAVFTKIKPISVAYGIDIEHHDTEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++++++ + + + L + Sbjct: 91 -----VITLEYDNFYLVNVYTPNAQPKLARLEYRMQWEDDFRRYLNDL--------DEKK 137 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + + F Sbjct: 138 PVIVCGDLNVAHNEIDLKNPKSNRKNPGFSDEERGKFTNLLDSGFIDSFRFFYPDATEMY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + L SDHCP+ Sbjct: 198 TWWSYRFNARENNAGWRIDYFCVSNKLKNELKNAEIH-----------MDILGSDHCPVV 246 Query: 300 IDY 302 ++ Sbjct: 247 LEI 249 >gi|21361254|ref|NP_005214.2| deoxyribonuclease-1 precursor [Homo sapiens] gi|118919|sp|P24855|DNAS1_HUMAN RecName: Full=Deoxyribonuclease-1; AltName: Full=Deoxyribonuclease I; Short=DNase I; AltName: INN=Dornase alfa; Flags: Precursor gi|181624|gb|AAA63170.1| DNase I [Homo sapiens] gi|3273382|gb|AAC24721.1| DNaseI [Homo sapiens] gi|10798586|emb|CAC12813.1| DNAse I [Homo sapiens] gi|20810454|gb|AAH29437.1| Deoxyribonuclease I [Homo sapiens] gi|67107113|gb|AAY67835.1| codon-optimized DNase I [synthetic construct] gi|109809707|dbj|BAE96965.1| deoxyribonuclease I splicing isomer 2 [Homo sapiens] gi|119605750|gb|EAW85344.1| deoxyribonuclease I, isoform CRA_b [Homo sapiens] gi|123982566|gb|ABM83024.1| deoxyribonuclease I [synthetic construct] gi|123997231|gb|ABM86217.1| deoxyribonuclease I [synthetic construct] gi|307685305|dbj|BAJ20583.1| deoxyribonuclease I [synthetic construct] Length = 282 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 37/283 (13%), Positives = 84/283 (29%), Gaps = 30/283 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AV 80 +++ ++NI T E + + + Q DI +QE+ + AV Sbjct: 22 SLKIAAFNIQTFGET---------KMSNATLVSYIVQILSRY--DIALVQEVRDSHLTAV 70 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K+ + +++ ++ R V + Y G + + Sbjct: 71 GKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYDDGCEPCGNDT 130 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 NR + ++ I D++ + L Q +W Sbjct: 131 FNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW---------- 180 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 L ++ GDFN +Y+ + + + + + + D Sbjct: 181 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAY----DRI 236 Query: 261 VMDQN-AYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISI 300 V+ ++ +S + S + +SDH P+ + Sbjct: 237 VVAGMLLRGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEV 279 >gi|261819592|ref|YP_003257698.1| endonuclease/exonuclease/phosphatase [Pectobacterium wasabiae WPP163] gi|261603605|gb|ACX86091.1| Endonuclease/exonuclease/phosphatase [Pectobacterium wasabiae WPP163] Length = 381 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 33/275 (12%), Positives = 83/275 (30%), Gaps = 27/275 (9%) Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 ++ + L+ADI+ E+ + + + + +S +I+ Sbjct: 111 SSQQRKNTGKIINLLNADILCAVEVENMDVLRDFNSQVLGKKKFSQFVMIDSPN--DPRG 168 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 I A R + ++ + A F +R +E+ ++ K+ + + Sbjct: 169 IDVACLTRYRIAQL---RTHIFDAGKQFDPVFSRDCLEVTLDAGLKQ-PIYILCNHFKSQ 224 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLGNNDDFWKTI 228 E Q++ + + + Q + VI GD N + + ++ Sbjct: 225 SGQTEQERQRGAQKRRDQSERVAEIVQQTYDLKKDYVVILGDLNEDSSNPWQSLAPLFSL 284 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIP----IDYFVMDQNAYKFLIQESFSEI------ 278 +I + + R K +DY + ++ ++ Sbjct: 285 SDLHPVIDPERPEKERYTYYFAGGKKGARLNQLDYIFLSAPLHQAMVGWGVERRGIYNID 344 Query: 279 ----------LYNEDDIKSRGKRLSDHCPISIDYD 303 + ++ S SDH + ++ D Sbjct: 345 KIAAKEGAEPVTPLPEVTSWDTAASDHAALWVEVD 379 >gi|303314689|ref|XP_003067353.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides posadasii C735 delta SOWgp] gi|240107021|gb|EER25208.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides posadasii C735 delta SOWgp] Length = 290 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 41/289 (14%), Positives = 87/289 (30%), Gaps = 21/289 (7%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+++ NI + K +R L + ++ + LQE+ Sbjct: 8 SIRILTHNIRY-ATSRPFKGEKPWPERKHLVLNELIFHTRHNAESFICLQEVLRVQLEDV 66 Query: 83 VFP----KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + +TW + S + + V P + +K + Sbjct: 67 LSGLNSHGDTWAYIGVGRDDGKQAGEYSPIFYRPDVWKLETWETVWLSETPEVPSK-GWD 125 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 A R + + VL + D + S L+ + + ++ + Sbjct: 126 AASIRIVTVGVFRHRASRKTVLAMSTHL---DDQGSKSRYESAKLI---LRTIDGYLHKF 179 Query: 199 KESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCNANK-NLRNK 254 K+ + +AGDFN ++N D +D D + + + + Sbjct: 180 KDRISGLFLAGDFNSEVNQEAYQVFIDPTSPLVDARDQIKPDERYGNEITYTGFGYEGER 239 Query: 255 I-PIDYFVMDQNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPISID 301 IDY ++ + ++ Y + G SDH + D Sbjct: 240 ETRIDYILVGPKTEQGF---PWTVKQYGVLPNKFDDGVFSSDHRAVVAD 285 >gi|331015775|gb|EGH95831.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 233 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 37/256 (14%), Positives = 76/256 (29%), Gaps = 41/256 (16%) Query: 54 YTLLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFY----STERLINHSKRDSN 107 LR+ +++ ADIVFLQE+ ++ +V T + S + + Sbjct: 12 LPELREAVRSVSADIVFLQEVHGEHHSHARRVKDWPTISQYEFLADSMWSDFAYGRNAVY 71 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 D A+ K + ++ + R + ++++ V + + Sbjct: 72 PDGDHGNALLSKYPIIQHENLDVSIDG-----TEQRGLLHCILQVPDHG-QVHAVCVHLG 125 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 F S QQ + L + + P ++AGDFN Sbjct: 126 LF-----------ESHRRQQLKLLAQLMDR-LPEGAPVIVAGDFNDWRQRAD------AL 167 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + F + + + + +D + S Sbjct: 168 LQGTGLHEVFVQRFGAPAKSFPARWPLLRLDRIYVRNATSHRPKVLS-----------SR 216 Query: 288 RGKRLSDHCPISIDYD 303 LSDH P++++ Sbjct: 217 PWSHLSDHAPLAVEVT 232 >gi|307130571|ref|YP_003882587.1| Endonuclease/Exonuclease/phosphatase family protein [Dickeya dadantii 3937] gi|306528100|gb|ADM98030.1| Endonuclease/Exonuclease/phosphatase family protein [Dickeya dadantii 3937] Length = 256 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 36/293 (12%), Positives = 85/293 (29%), Gaps = 49/293 (16%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 S+ +++ N + S LR +++ ADIV LQE+ Sbjct: 5 SQPSLGFSFTVLTINTH----------KGFSALNRRFILPELRDAVRSVSADIVCLQEVL 54 Query: 76 SYNAVAKV----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYP 129 ++ + +P + F + +++ + AV + ++ Sbjct: 55 GRHSTHPLQVEHWPDTSHYEFLAETMWNDYAYGRNAVYPEGDHGNAVLSRFPIFSYRNLD 114 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + ++ + R + ++++ + + + + + S QQ Sbjct: 115 VSVSERTK-----RGILHCVLKVPNRDLHIHVVCVHMGLT-----------ASHRRQQMA 158 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L D + + P ++AGDFN + K F + Sbjct: 159 LLCDLLAT-LPAEAPLIVAGDFNDWQMKA---NALLK--RSAGLEEVFSQHFGKPARTFP 212 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + LSDH P++++ Sbjct: 213 ARFPLLCLDRIYVRNAR-----------TSVPRLLPPKPWSHLSDHAPLAVEI 254 >gi|328881588|emb|CCA54827.1| putative large secreted protein [Streptomyces venezuelae ATCC 10712] Length = 620 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 38/327 (11%), Positives = 82/327 (25%), Gaps = 69/327 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 ++ + ++N+ L + + L + DI+ L+E+ Sbjct: 315 NELAVATYNVENLDPSDP-----------QEKFDALAKAVVENLASPDILALEEIQDNTG 363 Query: 80 VAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 V + S + N + +I + V Sbjct: 364 AKNDGTVAADLTVKKFTDAIVAAGGPAYEWRSVDPENNKDGGEPGGNIRQVFLFNPERVS 423 Query: 123 VLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 ++ P + + +R+ + G+ ++V+ Sbjct: 424 FTDRAGADATTATAVTGRKGHAELTLSPGRIDPANTAWEASRKPLAGEFVFRGRTVFVIA 483 Query: 162 IHLKSFCFLDS----LENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215 H S +S + S + QAQ + ++ Q E ++ GD N Sbjct: 484 NHFGSKGGDESIVSHHQPPVRSSEAKRLLQAQAVNGFVKQLLAVEKQADVLVVGDINDFE 543 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 D S + N +D + + F Sbjct: 544 FSGTTK----ALTDGGALYPAVKSLPRSERYSYVFQGNSQVLDQILTSPGVHHFEYDSVH 599 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 + + D SDH P + + Sbjct: 600 INAEFADQD--------SDHDPQVLRF 618 >gi|256396175|ref|YP_003117739.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM 44928] gi|256362401|gb|ACU75898.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM 44928] Length = 1007 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 92/290 (31%), Gaps = 44/290 (15%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + ++ +R+++WN + + RT +L + D D++ LQE Sbjct: 113 ASSPAIGLDLRILTWNTLW-------DRYDKDLIRTAERRPMLLAALRAADVDVIALQEA 165 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 V + ++ + S++ + + V + V + L Sbjct: 166 E-PALVKMLLAED-----WVRREWTLGGDPRSSDVADSGVLVLSRLPVVEAGWHAL---- 215 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + ++VE + V + HL S D SL ++Q L D Sbjct: 216 -----GRYKAVAAVVVEGGAGPVVVANTHLSSDHSADG--------ASLRTEQLGQLADG 262 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA----NKN 250 + VP V+ GDFN + + + D N + Sbjct: 263 LRAI--DAVPVVLVGDFNDDTDAPASRLGMTDAWTQVHGVADDTATFDPSANPLAAVSSL 320 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +D + L+ + S++ + + G +SDH I+ Sbjct: 321 TGDAKRLDRVL--------LLGATASDVRLIGEVPNADGLFVSDHYGITA 362 >gi|308273030|emb|CBX29634.1| hypothetical protein N47_J06150 [uncultured Desulfobacterium sp.] Length = 273 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 32/294 (10%), Positives = 77/294 (26%), Gaps = 33/294 (11%) Query: 11 FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 F + +S + + ++S N+ ++G + W + + D Sbjct: 9 FLMNNTISSGTRFLSVMSLNLRFGLAEDGPNNWIHRKISFMP-------LLSTFENDFYA 61 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE + + + + + + + V + + Sbjct: 62 FQEANDFQIDFLSDLLPDYNYIGRRQPAPAYWQHNIIFYNKSWKCVYCNHFYLSSTPN-- 119 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 R+ + + + +++ H + A+ Sbjct: 120 -MPSRFRGSKWPRQCTLGIFNNGLQNLIIVNTHFDFSSDVQVKS-------------AKL 165 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 ++ + + + P ++ GDFN + N+ K F C+ Sbjct: 166 IRKRLRRHSKKG-PIILMGDFNATPDSGCYNEFTSKVDAYPKFFDAFNNSAIRTCHRFSG 224 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ + N K G+ SDH P+ + F Sbjct: 225 KNKGEAIDWILYSGNLI---------IDNSQVITSKFSGRYPSDHYPLIASFVF 269 >gi|227535760|ref|ZP_03965809.1| exodeoxyribonuclease III [Sphingobacterium spiritivorum ATCC 33300] gi|227244248|gb|EEI94263.1| exodeoxyribonuclease III [Sphingobacterium spiritivorum ATCC 33300] Length = 255 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 30/298 (10%), Positives = 74/298 (24%), Gaps = 62/298 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+N L + K+ +AD++ LQE+ + + Sbjct: 1 MKIITYNVNGLRAALKKGW---------------LDWLKSTNADVICLQEIKATPDLIPE 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F ++ A+ K + G R Sbjct: 46 IALLEQLGFEHYWYPAQ-------KKGYSGTAIFTKVSPKRVE----YGCGHELYDFEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +K V+ + S ++ + Q + L I Sbjct: 95 I-----IRADFEKFSVMSTYFPSGTTGEARQTFKYQFLDDFQQYSDRLLKDIPNLIVCGD 149 Query: 204 PFVIA---------GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + N + I+ + + + + + Sbjct: 150 YNICHRAIDIHNPKSNANTSGFLPEEREWMENFINSG--YVDSFRHLNPEPHQYSWWSYR 207 Query: 255 ---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY ++ + + SDHCP+ ++ Sbjct: 208 AGARARNLGWRIDYNMVSAPLASQIEKS-----------YLLNDAVHSDHCPVVVEIS 254 >gi|332830343|gb|EGK02971.1| hypothetical protein HMPREF9455_01221 [Dysgonomonas gadei ATCC BAA-286] Length = 330 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 38/330 (11%), Positives = 92/330 (27%), Gaps = 55/330 (16%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAK-----N 63 + R++ +N+ + + + + + R + Sbjct: 5 AQENFRIMFYNVENMYDIKDNPETNDDDLTPSGQLHWTSYRYWKKLNDISTVISSVGDDR 64 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 +V + E+ + + + + + + N N +TA+ ++ +++ Sbjct: 65 YPPALVGICEVENDSVLFDLTRRAGLRKHKYEYIITNSK---DNRGSNTALLYQRDQIKI 121 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 + + +S R + + + IN + + + H S + Sbjct: 122 ISKR-SYTPTLESDPSKTTRDILHVTGKVINDEILDIFVCHFPSRREG----IKRTRPDR 176 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK------TIDPNDSLIR 236 + + LK + +I GDFN N + ++ D N + Sbjct: 177 IRCAELLRLKADSLFRIRKKANIIIMGDFNDYPNDISLSESLGAHSIKSPVTDKNLYNMF 236 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI------------------ 278 + + + + K ID F++ N K + S + Sbjct: 237 YHRLGEKNAGSYKYKGKWNFIDQFIISGNLLKPSCKISIKDKDAHIYSASFLLHDDNTKS 296 Query: 279 ------LYNEDDIKSRGKRLSDHCPISIDY 302 SDH PI +D Sbjct: 297 GGGGQKPLRTYSGFKYPGGYSDHLPIYMDL 326 >gi|291516724|emb|CBK70340.1| exodeoxyribonuclease III [Bifidobacterium longum subsp. longum F8] Length = 286 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 78/311 (25%), Gaps = 57/311 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-AVA 81 + + + N+N + + + +A D+ +QE+ + V Sbjct: 2 TITITTSNVNGIRA---------------AKRKGIEDWAGKHAPDVWCMQEVRAPQEDVD 46 Query: 82 KVFPKNTWCIFYSTERLINHS----KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +F + + + + + + ++ +D Sbjct: 47 SIFGEFGFEYATAGKIASPSDLHSLNEVCRVKGRAGVGLLTDLEVTDKRYGLPGLGEDVD 106 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 S R + G I V +++ + DS + L + + + Sbjct: 107 S---GRWIETDVKTPQGYTITVACVYVHAGNTDDSTKMEQK--YRFLDTMLTRMGELRDE 161 Query: 198 KKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEK 241 V+ GDFN K +D + + Sbjct: 162 AAHGGKQAVLCGDFNIAHTPLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLA 221 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + IDY + + + D + R Sbjct: 222 GDIQGPYTWWSQRGRAFDNNVGWRIDYQFATPELAE-------TARGFVIDKAPTYELRW 274 Query: 293 SDHCPISIDYD 303 SDH P++I YD Sbjct: 275 SDHAPLTITYD 285 >gi|325673954|ref|ZP_08153644.1| exodeoxyribonuclease III [Rhodococcus equi ATCC 33707] gi|325555219|gb|EGD24891.1| exodeoxyribonuclease III [Rhodococcus equi ATCC 33707] Length = 259 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 30/280 (10%), Positives = 59/280 (21%), Gaps = 54/280 (19%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 + + + D D++ +QE + Y + Sbjct: 5 RARTDRIVDWLARTDTDVLAMQETKCKDE----------QFPYERFTEAGYEVAHVGLSQ 54 Query: 111 HTAIAVRKKNVRVLQQSY--PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 +A+ + Q G R A + + G + V +++ + Sbjct: 55 WNGVAIASRIGLEDVQVGFADQPGFNKDPEAEATREARAIGATVGG--VRVWSLYVPNGR 112 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLG------- 219 L Y + L+ + GD+N Sbjct: 113 ELTDPHYVYK------LEWLAKLRADAEGWLAGNPDAQIALVGDWNVAPTDEDVWDPAFF 166 Query: 220 --------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVM 262 D + IDY + Sbjct: 167 EGKTHTSQPERDAFDAFAEAGFADVVRPHAPGP-GVYTYWDYTQLRFPKRQGMRIDYVLG 225 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + D + +GK SDH P+ +D Sbjct: 226 SPAFAARVTGAHI-------DRDERKGKGASDHAPVVVDL 258 >gi|296532245|ref|ZP_06894990.1| endonuclease/exonuclease/phosphatase [Roseomonas cervicalis ATCC 49957] gi|296267430|gb|EFH13310.1| endonuclease/exonuclease/phosphatase [Roseomonas cervicalis ATCC 49957] Length = 278 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 31/291 (10%), Positives = 78/291 (26%), Gaps = 52/291 (17%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + + + + S+N++ + D + + + D+V +Q Sbjct: 25 AIAPEPASTAPITVASYNVHKCVGLDRRF-----------DPARIARVIAEMAPDLVAVQ 73 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E + D + A+ VR+ +Q+ Sbjct: 74 EADRRFGRRVGLLDTGALGELGLSLVPVSRLPDGHGWHGNALLVRQGTPLSVQR------ 127 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + A R AV + +E+ ++ V+ H ++Q + Sbjct: 128 --LALPGAEPRGAVIVELELPAGRLRVVAAHFGLL-------------RRCRARQGAAIL 172 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + I +P ++ GD N + + ++ F + + Sbjct: 173 EAIA--AGPAMPTLMMGDLN---EWRPGRRSSLRALE-----PFFGPGISFGPASFPSRL 222 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D + + +++ + SDH P+ Sbjct: 223 PVFALDRIL------GWPQGVVRDVQVHDT----PLARIASDHLPLKARLS 263 >gi|261400777|ref|ZP_05986902.1| exodeoxyribonuclease III [Neisseria lactamica ATCC 23970] gi|269209377|gb|EEZ75832.1| exodeoxyribonuclease III [Neisseria lactamica ATCC 23970] Length = 259 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 79/307 (25%), Gaps = 78/307 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81 ++++S N+N + + +Y ADIV +QE+ + A A Sbjct: 2 LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + ++ +S +G Sbjct: 47 DMKNPHGMHGYWHCAEKRGYSGVAVYGKRKPDNV--------------QIGMGIEEFDRE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R V + ++ V+ ++L S + + + + + K Sbjct: 93 GRF-----VRCDFGRLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNE 140 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCN 246 V+ GD+N + + + + Sbjct: 141 GRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDNP 200 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY ++ + + ++ SDH P Sbjct: 201 GYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAP 249 Query: 298 ISIDYDF 304 + ++YD+ Sbjct: 250 LVVEYDY 256 >gi|30248098|ref|NP_840168.1| hypothetical protein NE0067 [Nitrosomonas europaea ATCC 19718] gi|30179983|emb|CAD83978.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718] Length = 274 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 87/282 (30%), Gaps = 48/282 (17%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + + + ++NI+ S LR LD D+VFLQE+ +A+ Sbjct: 26 GRTLHIATYNIH----------KGLSFFNQRLILHELRDQLHGLDVDVVFLQEVVGEHAL 75 Query: 81 A----KVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + +P+NT F + + + K H A+ + V + Sbjct: 76 HATRFRDWPRNTQYEFLADSMWPDFAYGKNAVYGHGHHGNAILSRFSIVNWE-----NED 130 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 S R +R + + I G K + I + F SQQ + ++ Sbjct: 131 ISAHRFESRGLLHCELAIPGWKDTLHCICVHLGLF-----------RRGRSQQLEAIEKR 179 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 I Q P V+AGDFN ++ + F + ++ Sbjct: 180 IRQLVSPDAPLVVAGDFNDWRGAANP--LLASRLNLVE---VFQHTHGKAARSFPSVLPL 234 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D + F R+SDH Sbjct: 235 LRLDRIYIRG----------FQVKNAQILHN-RPWSRISDHA 265 >gi|292491294|ref|YP_003526733.1| endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus Nc4] gi|291579889|gb|ADE14346.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus Nc4] Length = 226 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 38/282 (13%), Positives = 79/282 (28%), Gaps = 57/282 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VAK 82 +RLV++NI++ + ++L AD++ LQE+ + Sbjct: 1 MRLVTYNISSCRGTDRCFNP-----------ARTASVLRSLKADVLALQEVEHRSVNGQD 49 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + +H A+ + + + + L R Sbjct: 50 LLDYLAYQTGLVAIPGP----IFLRRSLHYGNALLTRAKVLQIRRHDLSVL-----RREP 100 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R A+++ ++ G+KI V+ HL Q Q L + Sbjct: 101 RGAIDVDLKWRGQKIRVVVTHLGLRS-------------RERRFQIQQLLNL--GLTPDG 145 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 V+ GDFN + + + + +D + Sbjct: 146 GRTVLMGDFNEWWPWSQTLRWLRREF-----------GRCLSPFSFPACYPIFALDRIWL 194 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +L + S + SDH P+ ++ Sbjct: 195 ----------HGHRRLLTLGVEASSLARVASDHLPLKAVVEW 226 >gi|332800472|ref|YP_004461971.1| exodeoxyribonuclease III Xth [Tepidanaerobacter sp. Re1] gi|332698207|gb|AEE92664.1| exodeoxyribonuclease III Xth [Tepidanaerobacter sp. Re1] Length = 251 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 84/304 (27%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VSWN+N L G +Y K++DADI +QE ++ Sbjct: 1 MKAVSWNVNGLRACLGKGF---------------LEYFKDVDADIFAIQETKLQEGQVEL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ AV K + + D+ R Sbjct: 46 -ELEGYEQYWN----------YAVKKGYSGTAVFTKISPLSVAYGIDIEEHDAEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + + +++++ + + + + L Sbjct: 91 -----VITLEFENFYFVNVYVPNSQRGLTRLDYRMKWEDDFREYLIKLDGI--------K 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + F + +A Sbjct: 138 PVICCGDKNVAHQEIDLKNPKSNRKNAGFTDEERQKMTELLNSGFIDAFRYLYPDKKDAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ + + + SDHCP+ Sbjct: 198 TWWSYMFKAREKNVGWRIDYFIVSERLKDKIKDVEIHSHV-----------MGSDHCPVL 246 Query: 300 IDYD 303 +D D Sbjct: 247 LDID 250 >gi|158522569|ref|YP_001530439.1| exodeoxyribonuclease III [Desulfococcus oleovorans Hxd3] gi|158511395|gb|ABW68362.1| exodeoxyribonuclease III [Desulfococcus oleovorans Hxd3] Length = 262 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 86/309 (27%), Gaps = 74/309 (23%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSY 77 +K++LVSWN+N L G + KNLDAD+V +QE + + Sbjct: 2 AKRKIKLVSWNVNGLRAVMGKGF---------------LETFKNLDADVVGIQETKLQAP 46 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + +++ + ++ +A + ++ D+ Sbjct: 47 QVTGDMANIEGYTSYWA---------HATTKKGYSGVAAFSRMPVKNAKTGMGREEYDNE 97 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R VE++ +I+ + + A Sbjct: 98 GRI---------VELDLGDFIFFNIYFPNGQMGEDRLTYKLDFYRDFFAYADA------- 141 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDS 243 ++ VI GD+N N + + D + + Sbjct: 142 YRKQGRSLVICGDYNTAHNEIDLKNPKANENTSGFMRIERDWLDKISADGYVDTFRHLYP 201 Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + IDYF + ++ + +D SD Sbjct: 202 DTVKYSWWTYRFKARERNVGWRIDYFFVTEDIISK---------GWLKDAFIDNTVYGSD 252 Query: 295 HCPISIDYD 303 HCP+ + + Sbjct: 253 HCPVGLVLE 261 >gi|28870665|ref|NP_793284.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213969036|ref|ZP_03397176.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato T1] gi|28853913|gb|AAO56979.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213926335|gb|EEB59890.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato T1] Length = 237 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 37/256 (14%), Positives = 76/256 (29%), Gaps = 41/256 (16%) Query: 54 YTLLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFY----STERLINHSKRDSN 107 LR+ +++ ADIVFLQE+ ++ +V T + S + + Sbjct: 16 LPELREAVRSVSADIVFLQEVHGEHHSHARRVKDWPTISQYEFLADSMWSDFAYGRNAVY 75 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 D A+ K + ++ + R + ++++ V + + Sbjct: 76 PDGDHGNALLSKYPIIQHENLDVSIDG-----TEQRGLLHCILQVPDHG-QVHAVCVHLG 129 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 F S QQ + L + + P ++AGDFN Sbjct: 130 LF-----------ESHRRQQLKLLAQLMDR-LPEGAPVIVAGDFNDWRQRAD------AL 171 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + F + + + + +D + S Sbjct: 172 LQGTGLHEVFVQRFGAPAKSFPARWPLLRLDRIYVRNATSHRPKVLS-----------SR 220 Query: 288 RGKRLSDHCPISIDYD 303 LSDH P++++ Sbjct: 221 PWSHLSDHAPLAVEVT 236 >gi|84686936|ref|ZP_01014820.1| hypothetical protein 1099457000247_RB2654_04259 [Maritimibacter alkaliphilus HTCC2654] gi|84665133|gb|EAQ11613.1| hypothetical protein RB2654_04259 [Rhodobacterales bacterium HTCC2654] Length = 281 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 33/297 (11%), Positives = 72/297 (24%), Gaps = 39/297 (13%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++SWN+ + S + Y DI + E+ S ++ Sbjct: 6 DLKVLSWNVEHFTGAGTGSR--------RDRVARVAGYVAGEAPDIFAIMEVESGRVFSE 57 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + +F TE TA +K + + G Sbjct: 58 FVNRMPGYVFAITEGPQTQETLIGIRHGITAFMTQKNEFKR--------------NNPGL 103 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + V + + + + + D +++ Sbjct: 104 RPGALVTVTAPDGS-HLPILFNHLKSLPSPEGFGLRDAMFEKAFGLKRTLDGVSEGLGQE 162 Query: 203 VPFVIAGDFNR----------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 V F++AGD N I + + + N + + Sbjct: 163 VRFILAGDLNTMGMTLKDSDQDITAAEEIARLDRRFRRYGMVRLPKTHDTTFNNGSTSSY 222 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEIL------YNEDDIKSRGKRLSDHCPISIDYD 303 +D+ + + + + R SDH P+ Sbjct: 223 APADLDHVFATETLTFVDQGQGAKVHVGGWAVEAEDASRDDWIARFSDHAPLMFTVT 279 >gi|326473513|gb|EGD97522.1| endonuclease/exonuclease/phosphatase [Trichophyton tonsurans CBS 112818] Length = 292 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 39/294 (13%), Positives = 77/294 (26%), Gaps = 24/294 (8%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD-IVFLQEMGSYNAVAK 82 R+++ NI + R L Y L+ + V LQE Sbjct: 8 FRILTHNIRYATTSPSAGEQP-WSVRAPHIVNEL-DYHSRLNPESFVCLQEALHNQVTDV 65 Query: 83 VFPK---------NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + W + + S A+ ++ V P + + Sbjct: 66 LAGLNSRPHAAETDQWAYYGVGRDDGKQAGEYSPIFYRPAVWTLQEKETVWLSETPSVPS 125 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 K + A R + I VL ++ D + S L+ ++ Sbjct: 126 K-GWDAASIRIVTIGVFNHKSSNITVLAMNTHL---DDQGSKSRFESAKLI---LSLIQK 178 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP----KEKDSRCNANK 249 ++ + + +AGDFN + + D+ + P + Sbjct: 179 YLARY-PEVKGNFLAGDFNSIESQEAYREFTKPGSSIVDTYKKVPAAQHYGDEITFTGFD 237 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY ++ + + SDH + D Sbjct: 238 GKTKGSRIDYVMVGPQSCSSASIPFTVNGYAVMPNRFDNRIYNSDHRAVVADIT 291 >gi|309379305|emb|CBX22078.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 259 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 79/307 (25%), Gaps = 78/307 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81 ++++S N+N + + +Y ADIV +QE+ + A A Sbjct: 2 LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + ++ +S +G Sbjct: 47 DMKNPHGMHGYWHCAEKRGYSGVAVYGKRKPDNV--------------QIGMGIEEFDRE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R V + ++ V+ ++L S + + + + + K Sbjct: 93 GRF-----VRCDFGRLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNE 140 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCN 246 V+ GD+N + + + + Sbjct: 141 GRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHTLGWTDMWRTLYPDNP 200 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY ++ + + ++ SDH P Sbjct: 201 GYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAP 249 Query: 298 ISIDYDF 304 + ++YD+ Sbjct: 250 LVVEYDY 256 >gi|162455565|ref|YP_001617933.1| hypothetical protein sce7284 [Sorangium cellulosum 'So ce 56'] gi|161166147|emb|CAN97452.1| hypothetical protein sce7284 [Sorangium cellulosum 'So ce 56'] Length = 354 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 43/318 (13%), Positives = 95/318 (29%), Gaps = 52/318 (16%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD--ADIVFLQEMGSYN 78 A +R+VS+N+ T++ T + + D+V LQE+ + + Sbjct: 42 ATSLRIVSYNVRYFGHGTRGIA------STSAAITRIATTLARMSPLPDLVCLQEVETQS 95 Query: 79 ---------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---------TAI 114 + ++ + + + R + + T + Sbjct: 96 LRSSTMNPRWHPEETQLDRLMTELHAALAQAQRRERYVAYYFPAHTYRLTSRTNIYTTGL 155 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSR-----AGNRRAVELLVEI-NGKKIWVLDIHLKSFC 168 AV ++ + + R R + E +G+ V + HL Sbjct: 156 AVLARDTFHIGHHNAERPHDITHRRGVKSLKQTRICAHVSFEHESGQSFDVFNTHLSLPS 215 Query: 169 FLDSLE---NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 ++A+ L D++ +++ S FV+ GDFN + Sbjct: 216 VFSREFWTGEARMGFGPNQIEEARVLADFVRRERRSDN-FVVVGDFNSLPGS-PVDRFLR 273 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + I D+ + ++ A ++ +D+ ++L + Sbjct: 274 EEIGFVDAFAKVRCFSETEARAFPTAGFMNLRMHLDHV-YSSERLQWLDFTGTHPFGHKG 332 Query: 283 DDIKSRGKRLSDHCPISI 300 LSDH P+ Sbjct: 333 AFA-----GLSDHVPLIA 345 >gi|15805383|ref|NP_294077.1| exodeoxyribonuclease III [Deinococcus radiodurans R1] gi|6458033|gb|AAF09936.1|AE001896_1 exodeoxyribonuclease III [Deinococcus radiodurans R1] Length = 283 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 34/308 (11%), Positives = 82/308 (26%), Gaps = 83/308 (26%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +++ ++N+N L + L + ++ D++ LQE+ + Sbjct: 32 TGPLKVTTFNVNGLRS---------------ALRKGLADWVESNQPDVLLLQEVRAEPMP 76 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + ++S + ++ +A+ + + LG A Sbjct: 77 DAL------PGYHSAWFPAQKAG-------YSGVAILSRLPLKDVR----LGMPHDEMDA 119 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R ++ + + ++L S ++ + + W+++ Sbjct: 120 EGRVVSAVV-----AGVRFVSVYLPSGSSGEARQGFKDRV-------LADYQAWVSELLA 167 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA------------- 247 + P VI GD+N + + + Sbjct: 168 AGEPVVIGGDYNIAHREIDLKNWRSNQKNSGFLPHERTWMTAHLAAGLVDCHRDCLGEEA 227 Query: 248 -NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + D RLSDH P Sbjct: 228 EYTWWSNRANAYANNVGWRIDYLL----------SAGVRVSGVRSDRS----VRLSDHAP 273 Query: 298 I--SIDYD 303 + ++ + Sbjct: 274 LTGWVELE 281 >gi|328954136|ref|YP_004371470.1| Endonuclease/exonuclease/phosphatase [Desulfobacca acetoxidans DSM 11109] gi|328454460|gb|AEB10289.1| Endonuclease/exonuclease/phosphatase [Desulfobacca acetoxidans DSM 11109] Length = 253 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 37/283 (13%), Positives = 83/283 (29%), Gaps = 32/283 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R++++N+ + +G + WK L+ + D++ QE+ + + Sbjct: 1 MRIMTFNLRFQNPLDGPNQWKFRK-------ELVLETIWAYQPDLLAAQEVTIPQ-LDYL 52 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 T + R I+ + + + V P + S+ A R Sbjct: 53 AANLTGYEPFIKHRNIDLTCQYPTIFFRSQTIVAGAGNEFWLSETPEVHRSKSWESAFPR 112 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +W S + A L+++ Q Sbjct: 113 MVTYGSFREVDRDLWFCFADTHL----------DHVSALARQKAATMLREFFLQL---NQ 159 Query: 204 PFVIAGDFNRKINYLGNNDDF--WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 P ++AGDFN + + ++ +E S + ID+ + Sbjct: 160 PAILAGDFNDHPQSSVHRVLARGDSPFRDSWEVLGHFEEGVSTQHKFDGEFFGGRIDWIL 219 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + F + SDH P ++ ++ Sbjct: 220 ITE---------PFRLKAAEIITYNQAKQYPSDHFPYYVEVNY 253 >gi|228949463|ref|ZP_04111717.1| hypothetical protein bthur0007_55730 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810186|gb|EEM56553.1| hypothetical protein bthur0007_55730 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 342 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 45/338 (13%), Positives = 96/338 (28%), Gaps = 56/338 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 ++R ++N+ E NS +++ ++ D++ QE+ S NA Sbjct: 2 QIRFGTFNLYQFVEPPYKWYEPNSFYSDADWLKKKEWIKKQILDMKCDVIGFQEVFSTNA 61 Query: 80 VAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD--- 135 + + + + F + + + ++ AIA + + V P ++ Sbjct: 62 LKNLVEEVGFTHFITVESPVTDINEPLVFIKPVVAIASKYPILSVSPVEIPDSIIEEVLL 121 Query: 136 SFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSF-------CFLDSLENTYS--------- 178 + +R ++ + I+ + + HLKS F S Sbjct: 122 GKTFKFSRIPIKAKIRIDSSRDVICYVSHLKSKKPAVKDIVFNPSETWDKQILENLRARS 181 Query: 179 ----PSCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNNDDF-------- 224 S +A L I++ + P ++ GD N + + Sbjct: 182 MGHVASLLQRGTEAAILYREISETLHNHKEFPIILLGDLNDDEHSIPIEALTNREKLLKI 241 Query: 225 ---------WKTIDPNDSLIRFP----KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 K I F + R + + +D+ + + Sbjct: 242 GDKIIPEEEQKIIYDYKLYDAFDLAPNQSGQKRLPTHYYGKLGNVLDFIFVSNALNEKNE 301 Query: 272 QESFSEILYNEDDIK-----SRGKRLSDHCPISIDYDF 304 + Y D K SDH + F Sbjct: 302 EYIGRVSEYKVFDRHLKCDDIENKTQSDHAQVVATIKF 339 >gi|172038845|ref|YP_001805346.1| hypothetical protein cce_3932 [Cyanothece sp. ATCC 51142] gi|171700299|gb|ACB53280.1| unknown [Cyanothece sp. ATCC 51142] Length = 677 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 37/320 (11%), Positives = 86/320 (26%), Gaps = 64/320 (20%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 V S K+ + + N+ L + L L+ K+ DI+ L E Sbjct: 133 VTNLLSGEDKLTVAAMNVENLDPDDSDRLNPLGK--------LIVNNLKS--PDIIVLIE 182 Query: 74 MGSYNAVAKVFPKNTWCIF-----------------YSTERLINHSKRDSNNDIHTAIAV 116 + + + + + + +I Sbjct: 183 IQDNDGPNNSDITDGTETYNALIDAITTATGPDYIAFDIPPGDDKDGGQPGGNIRVGYLY 242 Query: 117 RKKNVRVLQQS------------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 + V + + P D+ + +R+ + + I+ Sbjct: 243 QPSRVALNPGTAGTATDTVTVLEGPTLSLNPGRIEPDNGAFQNSRKPIVAEFQFKQNPIF 302 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKIN 216 ++ H S + +QA + +++ ++S ++AGD N I+ Sbjct: 303 IIGNHFVSQRGGNDD---------KRRKQATVVGNFVKALLSEDSKANVIVAGDLNDVID 353 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 ++ + S + N +DY ++ N + + Sbjct: 354 SEPI-----TILERSGLTNLSKLLPPSDRYTYEFNNNLQQLDYILVSDNLFTTGKSQFDI 408 Query: 277 EILYNEDDIKSRGKRLSDHC 296 + + LSDH Sbjct: 409 VH---VNVNQPSNLALSDHD 425 >gi|66043537|ref|YP_233378.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae B728a] gi|63254244|gb|AAY35340.1| Endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae B728a] Length = 291 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 37/292 (12%), Positives = 81/292 (27%), Gaps = 58/292 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 ++RL+S+NI + + + + + D D+V L Sbjct: 30 PQDGRLRLLSFNIQVGISTQRYHHYLTRSWQHLLPHGGRAGNLQKIGDLIN--DFDLVAL 87 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE+ + + + R+ + V + + +PL Sbjct: 88 QEVDGGSMRSGFVNQVEHLAQLGGFPYWYQQLNRNLGRLAQHSNGVLSRLRPTKIEDHPL 147 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G R A+ + + V+ +HL ++Q + Sbjct: 148 PGPAG-------RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQLAY 187 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 +++ I V+ GD N N L + + + Sbjct: 188 IRELIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 233 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + +D+ ++ +Q I SDH P++++ Sbjct: 234 WRPQRCLDHILLSPTLTLERVQVLAQPI--------------SDHLPVAVEI 271 >gi|85714027|ref|ZP_01045016.1| Endonuclease/exonuclease/phosphatase [Nitrobacter sp. Nb-311A] gi|85699153|gb|EAQ37021.1| Endonuclease/exonuclease/phosphatase [Nitrobacter sp. Nb-311A] Length = 226 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 37/282 (13%), Positives = 72/282 (25%), Gaps = 60/282 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+++WN++ D + + DIV LQE+ S Sbjct: 4 TIRVMTWNVHGTFNLNPRF-----------DIEAVASIIRRWSPDIVGLQEIDSRGR--- 49 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + ++ D + K + + + + Sbjct: 50 -NDNPFERLAGVVGAHNVDARSIVTADGDYGQVLLSKWRFIRAPTIVDVS----YREREA 104 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 RRA+ ++ +I V+ HL S +QA+ + + I Sbjct: 105 RRAISACIQSPIGEIAVIATHLGL-------------SIRERHEQARAIVNLIDAP---- 147 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 V+ GDFN + +R + + +D Sbjct: 148 -RTVVLGDFNDWFWVKSVRRILAQ-----------RCPVRTRMRTFPSWCPVLRLDRIY- 194 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + SDH P+ D F Sbjct: 195 -----------TVQTGNIVRAWTDPEARGRSDHLPVIADVMF 225 >gi|326383425|ref|ZP_08205112.1| exodeoxyribonuclease III Xth [Gordonia neofelifaecis NRRL B-59395] gi|326197831|gb|EGD55018.1| exodeoxyribonuclease III Xth [Gordonia neofelifaecis NRRL B-59395] Length = 260 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 31/306 (10%), Positives = 66/306 (21%), Gaps = 72/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N + + + D++ +QE + Sbjct: 1 MRLATWNVN----------------SIRARSEQVVAWMNRHAIDVLAMQETKCPDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + +G + G R Sbjct: 41 ------QFPVMSFLAHGYDVAFHGTGGYNGVAIASRIGVHDVH----IGFDGQPTYDGER 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW--ITQKKES 201 A + + V +++ + Y L D + + Sbjct: 91 EARAISATCGD--VRVWSLYVPNGREPGHPHFQYKLD------WLSALGDVTSLELSHDP 142 Query: 202 LVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246 V+AGD+N ++ + Sbjct: 143 AAQVVLAGDWNVAPTDDDVWDPEYFESRTHTSEEERAAFRHFIEGGFVDSAAPYTTDP-K 201 Query: 247 ANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ + D + SDH P Sbjct: 202 TYTFWDYQAGRFARNEGMRIDFALCSPALDDR-------VYDAFIDRAARAAEGASDHAP 254 Query: 298 ISIDYD 303 I D Sbjct: 255 IVFDLS 260 >gi|115372687|ref|ZP_01459994.1| putative secreted protein [Stigmatella aurantiaca DW4/3-1] gi|115370408|gb|EAU69336.1| putative secreted protein [Stigmatella aurantiaca DW4/3-1] Length = 394 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 33/276 (11%), Positives = 71/276 (25%), Gaps = 54/276 (19%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 +++NI + D+V LQE+ + + Sbjct: 1 MTYNIKHAELSS---------------LEAIASVINAQAPDVVALQEVDVLTVRSNRVDQ 45 Query: 87 NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146 + S + +A+ + Q PL A + V Sbjct: 46 AARLGQLTGLSHAFIPSLTSYDSGQYGLAILSRYPIRSAQRLPLRSAAEQR--------V 97 Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206 L E+ ++ + + F + + QQA+ +K + + Sbjct: 98 LALFEVELAPSRLIPVGVTHFGTTGA---------TERVQQAEDIKAALA----GKPWAL 144 Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 + GD N + + + D + + IDY ++ Sbjct: 145 LGGDLNASPSESSISSLLQQFTDAWA------RGGSGSGYTHSATLPTKRIDYVLLGSA- 197 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + S + SDH P++ Sbjct: 198 --WTSPLTASVVNAPSQ---------SDHRPLAATL 222 >gi|108706371|gb|ABF94166.1| Endonuclease/Exonuclease/phosphatase family protein, expressed [Oryza sativa Japonica Group] Length = 605 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 43/344 (12%), Positives = 86/344 (25%), Gaps = 63/344 (18%) Query: 22 QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-- 77 ++S+NI +T + + S L + ADI+ LQE+ S Sbjct: 254 GTFTVLSYNILADTYATSDTYSYCPTWALSWPYRRQNLLREIIGYHADIICLQEVQSNHF 313 Query: 78 -NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP--LLGAK 134 A K+ + + ++ + D R K V + + Sbjct: 314 EEFFAPELDKHGYQALFKKRTTEVYTGNLQSIDGCATFFRRDKFSHVKKYEFNKAAQSLT 373 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLD------------IHLKSFCFLDSLENTYSPSCS 182 D+ A R+ + + + + + C ++ N + Sbjct: 374 DAIIPAAQRKVALTRLIKDNIALIAVLEAKFGSHGADNPSKRQLLCVANTHINVHQDLKD 433 Query: 183 LLSQQAQWLKDWITQKK-ESLVPFVIAGDFNRKINYLGNN-------------------- 221 + Q L + + + +P ++ GDFN + Sbjct: 434 VKLWQVNTLLKGLEKIAVSADIPMLVCGDFNATPGSTPHGLLAMGKVDLMHPDLAIDPLG 493 Query: 222 ----------------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 D R + N IDY Sbjct: 494 ILRPASKLTHQLPLVSAYSSFARMVGAGYDLEHQRRRMDPATNEPLFTNCTRDFTGTIDY 553 Query: 260 FVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + E E +D + SDH + ++ Sbjct: 554 IFYTADSLSVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEF 597 >gi|326560422|gb|EGE10804.1| catabolite repression control protein [Moraxella catarrhalis 7169] gi|326565843|gb|EGE16005.1| catabolite repression control protein [Moraxella catarrhalis BC1] gi|326571181|gb|EGE21205.1| catabolite repression control protein [Moraxella catarrhalis BC7] Length = 336 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 87/310 (28%), Gaps = 69/310 (22%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-S 76 + Q +R+VS N+N L E + ++ +AD+V +QE + Sbjct: 69 QTANQVLRVVSINVNGLRAAEKKGFF---------------EWLAVSNADVVCIQESRIT 113 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + F W + ++ +A+ + V DS Sbjct: 114 HEQWTDKFRPKGWHTHLFAAQKAGYA----------GVAIYSRLPFVSVVDGLGFDLADS 163 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R +L + +++ ++L S + + + + + + Sbjct: 164 QGR-FICAQFDLSAQGIDHPVYIASLYLPSGSSGE-------EAQARKDLFLEKYRHILK 215 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEK 241 Q ++ ++ GD+N + + + I + + Sbjct: 216 QWRDENKSLIVCGDYNIVHKRIDIKNWSGNQKASGCLPHERAWLDHIYDELGYVDTFRVV 275 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + N+ IDY + K + + Sbjct: 276 RKDADIYSWWSNRGQARAKNVGWRIDYHACSPDWKKRTLNAWV-----------YKDSWF 324 Query: 293 SDHCPISIDY 302 SDH P+ IDY Sbjct: 325 SDHAPVIIDY 334 >gi|68536120|ref|YP_250825.1| putative extracellular nuclease [Corynebacterium jeikeium K411] gi|68263719|emb|CAI37207.1| putative extracellular nuclease [Corynebacterium jeikeium K411] Length = 931 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 43/332 (12%), Positives = 92/332 (27%), Gaps = 63/332 (18%) Query: 25 RLVSWNINTLSEQEGVSLWK----------------------NSVKRTTSDYTLLRQYAK 62 + S+N+ G S + + + Sbjct: 518 SIASFNVLNYFTDLGQDQGNCGSYKDREGNPVTANKCDVRGAYSEQAFKDQQEKIVKAIN 577 Query: 63 NLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 LD ++ L+E+ + A+ + + + + + I TA Sbjct: 578 TLDVSVLGLEEIQNSAKFGKDRDAALKHLVDELNAAGGKWEYVKTPATVAKNEDVIRTAF 637 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING----KKIWVLDIHLKSFC-- 168 + V + +S L R+ + + G + + H KS Sbjct: 638 IYQPDKVEPVGESKILDVEAFDQIA---RQPLAQQFKNKGAKDEQAFVAVVNHYKSKGSV 694 Query: 169 -FLDSLENTYSPSCSLLSQQAQ-WLKDWITQKKE-SLVPFVIAGDFNRKINYLGNNDDFW 225 D+ + + L + L W+++ + P I GDFN Sbjct: 695 ARGDADTGDGQGNNAKLRAEMSSQLVKWLSEDADFKDKPQFILGDFNAYAKEDAI----- 749 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + I+ K ++ + +D+ + +Q A + +I +E Sbjct: 750 RIIEEAGYTNLETKFDAG--HSYQFGGRVGSLDHVLANQKAAEMATGADVWDINADESVA 807 Query: 286 KSRGK--------------RLSDHCPISIDYD 303 + R SDH PI + ++ Sbjct: 808 FEYSRRNYNVVDFYEPNVFRASDHDPIKVGFN 839 >gi|325281386|ref|YP_004253928.1| exodeoxyribonuclease III Xth [Odoribacter splanchnicus DSM 20712] gi|324313195|gb|ADY33748.1| exodeoxyribonuclease III Xth [Odoribacter splanchnicus DSM 20712] Length = 257 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 30/305 (9%), Positives = 80/305 (26%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++++N+N L + DIV LQE Sbjct: 2 IKIITYNVNGLRSALSKGF---------------TDWLAEELPDIVCLQETKAQPDQIPT 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 F + F+ + + + +A+ + + G Sbjct: 47 LEFEALGYRSFFFSAEKKGY----------SGVAILTRITP----DHLEYGMGMQEYDRE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + + ++ ++ S + + + + + + ++ + ++ Sbjct: 93 GRF-----LRADYGDLSIVSVYHPSGTTGEERQ-------AFKMKWLEDFRHYVMKLSKT 140 Query: 202 LVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD+N +L ++ + F + Sbjct: 141 RKKLILCGDYNICHRPIDIHDPVRNANSSGFLPEEREWMSLFLESGFTDTFRYFHPEEPH 200 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDY ++ I +D + SDHCP Sbjct: 201 QYTWWSFRANARNNNKGWRIDYCMVSPE-----------VIPLLKDAYILPQVKHSDHCP 249 Query: 298 ISIDY 302 ++ Sbjct: 250 AVVEL 254 >gi|326318978|ref|YP_004236650.1| endonuclease/exonuclease/phosphatase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375814|gb|ADX48083.1| Endonuclease/exonuclease/phosphatase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 256 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 83/291 (28%), Gaps = 49/291 (16%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + ++++ N++ LR+ + + ADIVFLQE+ Sbjct: 7 SPSPVAFKVLTVNVHKGFTSFNRRFM----------LHELREAVRGVAADIVFLQEVLGT 56 Query: 78 NAVAKV----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + FP+ F + ++ + H A+ K V +++ + Sbjct: 57 HQRHASRVANFPQEPHYEFLADTIWGQYAYGRNAVYDSGHHGNALLSKFPIVHYENHDIS 116 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + R + +++ G V I + + +Q + + Sbjct: 117 VSG-----PERRGMLHCVLQPPGHDRQVHAICVHLGL-----------QEAHRQRQLRRV 160 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 D + + P ++AGDFN F Sbjct: 161 CDLVNTF-PADDPVIVAGDFNDWRGRAHE-----VLRKGAGLHEVFVHAGGRAVRTFPAS 214 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + + +LSDH P++ + Sbjct: 215 MPLLALDRIYVRNAS-----------VHAPVVLPRKPWHKLSDHAPLAAEI 254 >gi|149200232|ref|ZP_01877254.1| exodeoxyribonuclease (ExoA) [Lentisphaera araneosa HTCC2155] gi|149136674|gb|EDM25105.1| exodeoxyribonuclease (ExoA) [Lentisphaera araneosa HTCC2155] Length = 258 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 39/308 (12%), Positives = 88/308 (28%), Gaps = 82/308 (26%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80 V+L+SWN+N + E ++ DAD++ LQE Sbjct: 2 SVKLISWNVNGIRAVEKKGF---------------VDLMQSWDADVICLQETKAHKEQLS 46 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++ + ++ + +S +A+ + + + D R Sbjct: 47 DELINIGNYTSYWHSGEKKGYSS----------VAIYSRIEPIRVIEGLGIEEFDREGR- 95 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 ++ ++ ++ + + L +Q + K Sbjct: 96 --------VIIAEYSDFYLFGVYFPNAQAELKRIDYRLEFGDALIEQLKE--------KY 139 Query: 201 SLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSR 244 S V+ GDFN + + K + + + + Sbjct: 140 SDKACVLCGDFNVAHKAIDLKNPKANEKNPGYSIQERNWMDKFL--AAGHVDTFRMFNQN 197 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + IDYF + ++A ++ + + SDH Sbjct: 198 PDEYSWWSYRGGARSRNVGWRIDYFCVSESARDRVLDAGIMQEVL-----------GSDH 246 Query: 296 CPISIDYD 303 CP+SI+ + Sbjct: 247 CPVSIELE 254 >gi|326561625|gb|EGE11962.1| catabolite repression control protein [Moraxella catarrhalis 103P14B1] gi|326562589|gb|EGE12900.1| catabolite repression control protein [Moraxella catarrhalis 46P47B1] gi|326564034|gb|EGE14278.1| catabolite repression control protein [Moraxella catarrhalis 12P80B1] gi|326570498|gb|EGE20538.1| catabolite repression control protein [Moraxella catarrhalis BC8] gi|326575630|gb|EGE25553.1| catabolite repression control protein [Moraxella catarrhalis CO72] Length = 336 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 87/310 (28%), Gaps = 69/310 (22%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-S 76 + Q +R+VS N+N L E + ++ +AD+V +QE + Sbjct: 69 QTANQVLRVVSINVNGLRAAEKKGFF---------------EWLAVSNADVVCIQESRIT 113 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + F W + ++ +A+ + V DS Sbjct: 114 HEQWTDKFRPKGWHTHLFAAQKAGYA----------GVAIYSRLPFVSVVDGLGFDLADS 163 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R +L + +++ ++L S + + + + + + Sbjct: 164 QGR-FICAQFDLSAQGIDHPVYIASLYLPSGSSGE-------EAQARKDLFLEKYRHILK 215 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEK 241 Q ++ ++ GD+N + + + I + + Sbjct: 216 QWRDENKSLIVCGDYNIVHKRIDIKNWSGNQKASGCLPHERAWLDHIYDELGYVDTFRVV 275 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + N+ IDY + K + + Sbjct: 276 RKDADIYSWWSNRGQARAKNVGWRIDYHACSPDWKKRTLNAWV-----------YKDSWF 324 Query: 293 SDHCPISIDY 302 SDH P+ IDY Sbjct: 325 SDHAPVIIDY 334 >gi|312132556|ref|YP_003999895.1| xtha [Bifidobacterium longum subsp. longum BBMN68] gi|311773493|gb|ADQ02981.1| XthA [Bifidobacterium longum subsp. longum BBMN68] Length = 286 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 78/311 (25%), Gaps = 57/311 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-AVA 81 + + + N+N + + + +A D+ +QE+ + V Sbjct: 2 TITITTSNVNGIRA---------------AKRKGIEDWAGKHAPDVWCMQEVRAPQEDVD 46 Query: 82 KVFPKNTWCIFYSTERLINHS----KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +F + + + + + + ++ +D Sbjct: 47 SIFGEFGFEYATAGKIASPSDLHSLNEVCRVKGRAGVGLLTDLEVTDKRYGLPSLGEDVD 106 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 S R + G I V +++ + DS + L + + + Sbjct: 107 S---GRWIETDVKTPQGYTITVACVYVHAGNTDDSTKMEQK--YRFLDTMLTRMGELRDE 161 Query: 198 KKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEK 241 V+ GDFN K +D + + Sbjct: 162 AAHGGKQAVLCGDFNIAHTPLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLA 221 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + IDY + + + D + R Sbjct: 222 GDIQGPYTWWSQRGRAFDNNVGWRIDYQFATPELAE-------TARGFVIDKAPTYELRW 274 Query: 293 SDHCPISIDYD 303 SDH P++I YD Sbjct: 275 SDHAPLTITYD 285 >gi|302543032|ref|ZP_07295374.1| exodeoxyribonuclease III [Streptomyces hygroscopicus ATCC 53653] gi|302460650|gb|EFL23743.1| exodeoxyribonuclease III [Streptomyces himastatinicus ATCC 53653] Length = 273 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 33/306 (10%), Positives = 75/306 (24%), Gaps = 71/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 + + + N+N L + AD+V LQE+ Sbjct: 8 LSVTTVNVNGLRAAAKKGFVP---------------WLDGTAADVVCLQEVRAEPRELPE 52 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 V + W + ++ + ++V + + D R Sbjct: 53 AVREPDGWHVVHAP----------AAAKGRAGVSVYARRELEAVRVGFGSSEFDDSGR-- 100 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + V++ G + V ++L S ++ + + L++ Sbjct: 101 -----YVEVDLPG--VTVGSLYLPSGEVGTERQDEKERFTAEFLPYLKELRERA---AAD 150 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ GD+N + + + Sbjct: 151 GREALVCGDWNIAHQEADLKNWKANRKKSGFLPEERAWLSRVFEEAAYVDVVRALHPDVD 210 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + IDY V + + + +R SDH Sbjct: 211 GPYSWWSYRGRAFDNDAGWRIDYQVATPGLAGRA-------LKAVVERAPAYDQRWSDHA 263 Query: 297 PISIDY 302 P+++ Y Sbjct: 264 PVTVTY 269 >gi|296113045|ref|YP_003626983.1| catabolite repression control protein [Moraxella catarrhalis RH4] gi|295920739|gb|ADG61090.1| catabolite repression control protein [Moraxella catarrhalis RH4] Length = 336 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 87/310 (28%), Gaps = 69/310 (22%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-S 76 + Q +R+VS N+N L E + ++ DAD+V +QE + Sbjct: 69 QTANQVLRVVSINVNGLRAAEKKGFF---------------EWLAISDADVVCIQESRIT 113 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + F W + ++ +A+ + V DS Sbjct: 114 HEQWTDKFRPKGWHTHLFAAQKAGYA----------GVAIYSRLPFVSVVDGLGFDLADS 163 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R +L + +++ ++L S + + + + + + Sbjct: 164 QGR-FICAQFDLSAQGIDHPVYIASLYLPSGSSGE-------EAQARKDLFLEKYRHILK 215 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEK 241 Q ++ ++ GD+N + + + I + + Sbjct: 216 QWRDENKSLIVCGDYNIVHKRIDIKNWSGNQKASGCLPHERAWLDHIYDELGYVDTFRVV 275 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + N+ IDY + K + + Sbjct: 276 RKDADIYSWWSNRGQARAKNVGWRIDYHACSPDWKKRTLNAWV-----------YKDSWF 324 Query: 293 SDHCPISIDY 302 SDH P+ IDY Sbjct: 325 SDHAPVIIDY 334 >gi|94496587|ref|ZP_01303163.1| exonuclease III [Sphingomonas sp. SKA58] gi|94423947|gb|EAT08972.1| exonuclease III [Sphingomonas sp. SKA58] Length = 265 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 86/311 (27%), Gaps = 74/311 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 AQ + + SWNIN + ++ Q + DI+ LQE V Sbjct: 2 AQTLSICSWNIN----------------SVRARIDIVEQLLREETPDILCLQE---TKVV 42 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + FP + +++N +H +A+ K ++ Sbjct: 43 NETFPTEMFRRLGYVHQVLN------GQRMHHGVAILSKVPIHEDDRLDWQANGEARH-- 94 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 V + ++ + + ++++ + + +L+ I Sbjct: 95 -----VGVRLDNG---VRIENVYVPAGGDVPDRTVNPKFGQK-----LDFLQRMIEWSAA 141 Query: 201 -SLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 P ++ GDFN + + + ND + + Sbjct: 142 LEDKPTILTGDFNIAPLECDVWSHRQLLDVVSHTPIECEILGRLQASNDWVDIGRHFHPA 201 Query: 244 RCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + +D+ M ++ + + + + S Sbjct: 202 PARLYTWWSYRAKDWAASDRGRRLDHMWMTRDVAEKAVGH-------RVIEPARSWIKPS 254 Query: 294 DHCPISIDYDF 304 DH PI D+ F Sbjct: 255 DHIPIITDFAF 265 >gi|83643892|ref|YP_432327.1| metal-dependent hydrolase [Hahella chejuensis KCTC 2396] gi|83631935|gb|ABC27902.1| Metal-dependent hydrolase [Hahella chejuensis KCTC 2396] Length = 265 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 37/288 (12%), Positives = 74/288 (25%), Gaps = 60/288 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFLQEMGS 76 +RL+S+NI + + + + D+V LQE Sbjct: 13 IRLLSFNIQVGISTAAYRHYVTRSWQHVLPSQSRNKNLDRIAALLSQY--DVVALQECDG 70 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVLQQSYPLLGA 133 + + + + S + I + R + V Q P + Sbjct: 71 GSIRSGFVNQVEYLAEKSGHPYWFQQLNRNLGRIAQHSNGLLSRYRPNSVTQHKLPGVIP 130 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 R A+ + V+ +HL QQ + + Sbjct: 131 G--------RGAIIATYGDPTNPLVVVMLHLSLG-------------EKAQCQQLEHVCK 169 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 I V+ GD N + + R N + R Sbjct: 170 LIEGY----EHVVLMGDLNNHAE---------QLLSSTALGRTTLVSLPERVNTFPSWRP 216 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + +D+ ++ + + + SDH P+++D Sbjct: 217 ERSLDHIMVSPGLQIR----NAGVVCFPV----------SDHLPVAVD 250 >gi|328467999|gb|EGF39023.1| exodeoxyribonuclease A [Lactobacillus helveticus MTCC 5463] Length = 275 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 80/303 (26%), Gaps = 56/303 (18%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L+SWNI++L+ + + R + L+ DI+ +QE Sbjct: 3 LISWNIDSLNAALTGTSARAEETRG------VLDKIHALNPDIIAIQETKLRATGPTKKH 56 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + + S + + K S P +GA + G Sbjct: 57 QTILAEKFPEYDYVWRSSEEPARKGYAGTMYLYKKELKPAVSKPAIGAPEPMDEEGR--- 113 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++ + K +V ++ + + + L + P Sbjct: 114 ---IITLEFDKYFVTQVYTPNSGNGLKRLADRQVWDQKYIEYLKKLNE--------KKPV 162 Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + +GD+N + + F K + Sbjct: 163 LASGDYNCAHTEIDLKHPENNHHSAGFTDEERADFTNLLDAGFTDTFRKVNGNVEGVYSW 222 Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY+++ +++ + DHCPI + Sbjct: 223 WAQRVRTAKANNSGWRIDYWLVSNRIADKVVRSEMIDTGKRA-----------DHCPILL 271 Query: 301 DYD 303 + + Sbjct: 272 EIN 274 >gi|301788284|ref|XP_002929556.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 1 [Ailuropoda melanoleuca] gi|301788286|ref|XP_002929557.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 2 [Ailuropoda melanoleuca] gi|301788288|ref|XP_002929558.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 3 [Ailuropoda melanoleuca] gi|281345899|gb|EFB21483.1| hypothetical protein PANDA_019762 [Ailuropoda melanoleuca] Length = 318 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 76/311 (24%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + + +++ SWN++ L + K DI+ LQE Sbjct: 53 TSPSGKSATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K+ + S + S+ + ++ + + + + G Sbjct: 98 KCSE--NKLPAELQELSGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R V ++ ++ + + + L Sbjct: 148 EEEHDQEGRVIVA-----EFDAFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ + L Sbjct: 255 HLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 306 --GSDHCPITL 314 >gi|182701737|ref|ZP_02615102.2| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum NCTC 2916] gi|182668752|gb|EDT80730.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum NCTC 2916] Length = 360 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 105/321 (32%), Gaps = 64/321 (19%) Query: 22 QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +V++NI G +S ++T + + + K ++ +FLQE Sbjct: 61 DSFSIVTFNIGYGGMDDKQDFFMDGGKGSRSSSKEKTIENMREITSFLKKDNSSFIFLQE 120 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV---------- 123 + + + + F + + ++ + + S + + + K + V Sbjct: 121 VDTNS--TRSFRIDQYDYLKNSLKAYSSSMALNYKTPWVPVPILKPHGTVNAGLVNLSKY 178 Query: 124 -----LQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTY 177 + YP + +R +E + + NG+++ +++ HL ++ Sbjct: 179 KINSATRYQYPGKESWPRQLAELDRCFLESRISLENGRELVLINSHLSAYDKGG------ 232 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---------NDDFWKTI 228 + QQ +LK++I ++ + ++ GD+N I D K Sbjct: 233 ----KIRKQQLSFLKNYIIKEYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIP 288 Query: 229 DP--NDSLIRFPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + + + + ID F++ N + + + Sbjct: 289 NDFKPEGFKWVADKNVPTTRTDATPYKKGENFTAVIDGFLVSDNI--EVTSVKAHSMEFK 346 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 DH P+++++ Sbjct: 347 NT----------DHNPVNMEF 357 >gi|91214649|ref|ZP_01251622.1| hypothetical protein P700755_17329 [Psychroflexus torquis ATCC 700755] gi|91187076|gb|EAS73446.1| hypothetical protein P700755_17329 [Psychroflexus torquis ATCC 700755] Length = 343 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 35/308 (11%), Positives = 86/308 (27%), Gaps = 56/308 (18%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 Y ++ F + + ++++S+N+ + + + + + K Sbjct: 81 SYFSKIIVFNDNSSVEIKNSLKVMSYNVRLFNLYNWIEKTEVG--------EKISDFIKV 132 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 DIV Q+ N + +++ + + + + IA+ K + Sbjct: 133 ETPDIVAFQDYYKANDLD----MSSYPYVFEKYKSKSS---------NVGIAIFSKYKII 179 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + S ++ A+ + + + V +HL+S + + Sbjct: 180 HRGSVDFPNTHNN--------AIYADIVVKKDTLRVYAVHLESLKIIPDVLELRKEDRQQ 231 Query: 184 LSQ--------QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 L Q + + +P ++ D N + + Sbjct: 232 LINRVGKSFVKQQEQAILLSKSFSSTSLPKIVCMDMNNTAFSYVASQLLKHNLKD----- 286 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 F + ID +E + K+ +LSDH Sbjct: 287 AFVESGYGLGKTFDFDFLPFRIDVIF--------------NEKSLKNANFKNYSLKLSDH 332 Query: 296 CPISIDYD 303 PI ++ Sbjct: 333 YPIMASFN 340 >gi|324499909|gb|ADY39972.1| CCR4-NOT transcription complex subunit 6-like protein [Ascaris suum] Length = 610 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 47/348 (13%), Positives = 95/348 (27%), Gaps = 71/348 (20%) Query: 23 KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++ +N+ + + S + + + ++ +ADI+ LQE+ + Sbjct: 236 TFTVLCYNVLCDKYASSNLYSYCPSWALNWEYRKAAILKEIRHYEADIITLQEVETEQFR 295 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--AIAVRKKNVRVLQQSYPLL------- 131 + P+ + + +K + D A+ K + L+ Sbjct: 296 SLFLPELEAIGYAGIFSPKSRAKTMNEEDRKYVDGCAIFWKYDKFEMDREHLIEFTQIAI 355 Query: 132 ----GAKDSFSRAGNR--RAVELLVEIN------------------GKKIWVLDIHLKSF 167 ++ +R R A+ ++ I G + V H+ Sbjct: 356 KKAQTSEHMLNRVMPRDNIALCAVLRIKENVYSSRRMAMSPSDNVVGNPLVVCTAHIHW- 414 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKK---ESLVPFVIAGDFNRKINY------- 217 + C +L Q+ L + I++K P +I GD N Sbjct: 415 --DPEFCDVKLIQCMMLVQEIGNLLEEISEKYRITPQQTPVLICGDLNSLPESGVFEFLS 472 Query: 218 ------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------NANKNLRNKIPI 257 +D + D + N L K I Sbjct: 473 KGAIAKDHPDLKGFRDDPCLTRLSATDDPKVYTHALRLDSAVDVNALPFTNYTLEFKGVI 532 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDD---IKSRGKRLSDHCPISIDY 302 DY + L ++ + + + SDH PI Y Sbjct: 533 DYIFSTPQSLARLGVLGPLDMTWVQANKIIGFPHPHIPSDHVPIMAQY 580 >gi|291239603|ref|XP_002739715.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii] Length = 563 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 78/309 (25%), Gaps = 61/309 (19%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 S+NI + +++ K L + D+DIV QE+ + K Sbjct: 278 ASYNIWNFNS-----FVEDNHKEYERRILHLGEIVSQSDSDIVSFQEV--RFDLEKSGEL 330 Query: 87 NTWCIFYSTERLINHSKRD---------SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + + + L N+ +A+ K L Sbjct: 331 GPFQVQHLSLALPNYQFIYQPAMTFMDNIFGRTEEGLAIFSKFPIKSHDFILLSRNASDP 390 Query: 138 SRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + R + +E I V + HL + + + Sbjct: 391 NDFHQRICIHAEIEFPVFGMIHVFNTHLSLSEDARD----------------RTVVEIWE 434 Query: 197 QKKESLVPFVIAGDFNRKINYLGNN----DDFWKTIDPNDSLIRFPKEKDSR-------- 244 ++ P ++ GD N + + + + + Sbjct: 435 FMQKFTGPALLMGDLNAEPHEKSIKFLTGQAEINGVQTKGLYDAWTLQHKEPRSAKLGLY 494 Query: 245 ----------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + + IDY + K + + S + DD K + SD Sbjct: 495 RANEKRDHGLTWSTIKPQLVSRIDYIFVR--LPKDIQLHNISLL----DDGKRKHFAASD 548 Query: 295 HCPISIDYD 303 H + Sbjct: 549 HLGLLATVS 557 >gi|225022084|ref|ZP_03711276.1| hypothetical protein CORMATOL_02117 [Corynebacterium matruchotii ATCC 33806] gi|224945017|gb|EEG26226.1| hypothetical protein CORMATOL_02117 [Corynebacterium matruchotii ATCC 33806] Length = 298 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 81/306 (26%), Gaps = 71/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + LD D++ +QE K Sbjct: 1 MRIANWNVN----------------SVRTRVDRIVAALARLDIDVLLVQETKCK---DKQ 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + + +A+ + Q+ + + Sbjct: 42 FPFDAF---------PGYEIAHHGLNQWNGVAILSRVGLADIQTSFPHQPGFAKDPRKPQ 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK---- 199 + + + V +++ + + Y + L + + Sbjct: 93 NLEARAISADCGGVRVWSLYVPNGRAIADRHYDYK------LRWLDALARHVEDQAGDPE 146 Query: 200 -ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK-----------DSRCNA 247 S P V+ GDFN D + + ++ S + Sbjct: 147 QPSSQPLVLGGDFNIAPTDANVWD--ITEFIDHTHVTEAERQAFAGLIEAGLTVTSPTSG 204 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 K + ID+ + D + G SDH P+ Sbjct: 205 YSYWDYKAGRFPKNEGMLIDFQLARG----------LHATGSFIDVAERSGTGASDHAPV 254 Query: 299 SIDYDF 304 +DYD+ Sbjct: 255 VVDYDY 260 >gi|109037932|ref|XP_001097104.1| PREDICTED: deoxyribonuclease gamma isoform 1 [Macaca mulatta] Length = 305 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 91/290 (31%), Gaps = 32/290 (11%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN- 78 A +R+ S+N+ + E S + + ++ + K DI+ L E+ N Sbjct: 17 SALALRICSFNVRSFGE---------SKQEDQNAMDVIVKVIKRC--DIMLLMEIKDSNN 65 Query: 79 ----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + N+ + + R++ + + A ++K V V ++SY + Sbjct: 66 RICPVLMEKLNGNSRRGITYNYVISSRLGRNTYKEQY-AFLYKEKLVSV-KRSYHYHDYQ 123 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D +R + + + I S+ L+ W Sbjct: 124 DGDVDVFSREPFVVWFQSPHTAVKDFVIIPLHTTPETSV----KEIDELVDVYMDVKHRW 179 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 F+ GDFN +Y+ + + + +++ Sbjct: 180 ------KAENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKRSTKCAY 233 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 I + Q ++ +S S + + + + L SDH P+ Sbjct: 234 DRI--VLRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKL 281 >gi|261380655|ref|ZP_05985228.1| exodeoxyribonuclease III [Neisseria subflava NJ9703] gi|284796637|gb|EFC51984.1| exodeoxyribonuclease III [Neisseria subflava NJ9703] Length = 259 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 79/307 (25%), Gaps = 78/307 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81 ++++S N+N + + +Y ADIV +QE+ + A Sbjct: 2 LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSD 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + ++ +S + +G Sbjct: 47 DMKNPHGMHGYWHCAEKRGYSGVAVYSKRKPDNV--------------QIGMGVEEFDRE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R V + K+ V+ ++L S + + + + + K Sbjct: 93 GRF-----VRCDFGKLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNE 140 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCN 246 V+ GD+N + + + + Sbjct: 141 GRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVP 200 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY ++ + + ++ SDH P Sbjct: 201 GYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAP 249 Query: 298 ISIDYDF 304 + ++YD+ Sbjct: 250 LVVEYDY 256 >gi|325129291|gb|EGC52129.1| exodeoxyribonuclease III [Neisseria meningitidis OX99.30304] gi|325135311|gb|EGC57932.1| exodeoxyribonuclease III [Neisseria meningitidis M0579] gi|325201282|gb|ADY96736.1| exodeoxyribonuclease III [Neisseria meningitidis M01-240149] Length = 259 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 79/305 (25%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S N+N + + +Y ADIV +QE+ + A Sbjct: 2 LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEA-DLS 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ +AV K +G R Sbjct: 46 ADMKNPHGMHGYWHCA-------EKRGYSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + ++ V+ ++L S + + + + + K Sbjct: 95 F-----VRCDFGRLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNEGR 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248 V+ GD+N + + + + Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHTLGWTDMWRTLYPDNPGY 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY ++ + + ++ SDH P+ Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 251 Query: 300 IDYDF 304 ++YD+ Sbjct: 252 VEYDY 256 >gi|312067871|ref|XP_003136947.1| exodeoxyribonuclease III family protein [Loa loa] gi|307767891|gb|EFO27125.1| exodeoxyribonuclease III family protein [Loa loa] Length = 306 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 83/309 (26%), Gaps = 75/309 (24%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 ++++++SWN+ L D + + DIV LQE Sbjct: 47 SGREIKIISWNVAGLRA------------WIKKDGHSI---LVKENPDIVALQETKCVEV 91 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 ++ +N + F +T H + + K+ + ++ Sbjct: 92 PNEL--QNGYYSFLNTSEKSGHGGV---------LLLTKEEPIKVTYTFDDKSKSGLDGN 140 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + + ++++ ++ + + + L Sbjct: 141 GKGRIIIA-----EYENYYLINAYVPNSGRGLVNLDKRKFWDDCYFSFIKKL-------- 187 Query: 200 ESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDS 243 + P V GD N + + + + F + Sbjct: 188 DLNKPIVYVGDLNVAHQEIDLANPKTNYNKTAGFTDQERNDFTRLLDAGFVDVFRRLNPE 247 Query: 244 RCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + N +DYFV+ + + + + + SD Sbjct: 248 KEGVYTFWSNMRNAREKNVGWRLDYFVVSERIMNKVKECDILCSV-----------KGSD 296 Query: 295 HCPISIDYD 303 HCP+S+ + Sbjct: 297 HCPLSLTIE 305 >gi|257054579|ref|YP_003132411.1| exodeoxyribonuclease III [Saccharomonospora viridis DSM 43017] gi|256584451|gb|ACU95584.1| exodeoxyribonuclease III [Saccharomonospora viridis DSM 43017] Length = 265 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 31/307 (10%), Positives = 72/307 (23%), Gaps = 71/307 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81 + + + N+N L ++ + AD+V QE+ + V Sbjct: 2 LTVSTVNVNGLRAAAKKGF---------------SEWFEATSADVVACQEVRADPGVLPD 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + W ++ + + + + + R Sbjct: 47 ALREPPGWHTVHAACA----------TKGRNGVCLYSRIEPESVRVGFGEAEFEDSGR-- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + + ++ V ++L S + L+D + Sbjct: 95 -----YVEMWLP--RVVVGSLYLPSGEVGTPRQEEKERFMDTFLPYLATLRD---KASSE 144 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ GD+N + D + Sbjct: 145 GKEVLVVGDWNIAHAEVDLKNWKANRKNSGFLPEERAWLSRVFDELGYVDVQRHLDPEGP 204 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + IDY + + + +S KR SDH Sbjct: 205 GPYTWWSYRGRAFDNDAGWRIDYQIATPGLAQRCTS-------MVVERAESYDKRWSDHA 257 Query: 297 PISIDYD 303 P++ Y+ Sbjct: 258 PVTATYE 264 >gi|218887544|ref|YP_002436865.1| exodeoxyribonuclease III [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758498|gb|ACL09397.1| exodeoxyribonuclease III [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 259 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 76/304 (25%), Gaps = 74/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L SWN+N + G W + D IV LQE K Sbjct: 3 LKLYSWNVNGIRALSGKPEW---------------NWFAGCDGHIVGLQE-------TKA 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ E ++ +AV + + L D + R Sbjct: 41 EPEQVPAAHRDPEGWKAWWLASRVKKGYSGVAVFSRVEPLAVH----LDMPDPAWQGEGR 96 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +I+ + + N A+ L+ Sbjct: 97 C-----IHLEFPAFHYFNIYFPNGGQGEERLNYKLGFYDAFLNHAEDLRRH--------K 143 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GDFN +L + + F + +A Sbjct: 144 PIVVCGDFNTAHRPIDLARPKDNEDISGFLPIERAWMDRFTAAGYVDTFRLVQGDTPHAY 203 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 K IDYF + + + SDHCP+ Sbjct: 204 SWWSYKTRARERNVGWRIDYFFVSEELRGAVRDAWI-----------DMHVMGSDHCPVG 252 Query: 300 IDYD 303 + D Sbjct: 253 LALD 256 >gi|224539371|ref|ZP_03679910.1| hypothetical protein BACCELL_04276 [Bacteroides cellulosilyticus DSM 14838] gi|224519006|gb|EEF88111.1| hypothetical protein BACCELL_04276 [Bacteroides cellulosilyticus DSM 14838] Length = 370 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 40/328 (12%), Positives = 93/328 (28%), Gaps = 77/328 (23%) Query: 5 YVLALVFFLVP--------CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 Y+LA+ F + +++ ++N+ + T Sbjct: 84 YILAIFQFSFTKKIPEGHYSSNYADGYLKIATYNVGNFGG-----------EITGYSCKE 132 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + +Y K + D++ QE G FP ++ +S R DS + Sbjct: 133 IARYMKEQEVDVLCFQECGDNKY----FPMDSIRNVFSYWRYALIPTEDS---------I 179 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 R + YPL+ + + +++ + + + +L+ HL++ + Sbjct: 180 RGVLPIAVFSRYPLVNPQFISYQQSANCSMQCDIVLGRDTVRLLNNHLQTTSVSQNRRKW 239 Query: 177 YS-----------------------PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR 213 + ++Q ++ + S P + GDFN Sbjct: 240 ERGLANSNDTRREAEVVQGAITSLHNNFVKRAEQTDSIRQLV---VASPYPVLACGDFNS 296 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273 + + + F + + + IDY + Sbjct: 297 LPSSYT-YAELSDVLKDG-----FRTSGRGYMYTYRYFKRLLRIDYIFHSPGIQGYRYYS 350 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISID 301 ++ SDH P+ ++ Sbjct: 351 PDLDLC-------------SDHNPVLME 365 >gi|144900918|emb|CAM77782.1| predicted metal-dependent hydrolase (COG3568) [Magnetospirillum gryphiswaldense MSR-1] Length = 237 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 71/258 (27%), Gaps = 37/258 (14%) Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAV-----AKVFPKNTWCIFYSTERLINHSKR 104 + + + L D+V LQE+ A+ + + + R + Sbjct: 10 YGARLAAMTEALAELRPDVVLLQEVLDAPALGLHTGNTIAARLGCHVANLALREKPRNIE 69 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164 D + +AV + S PL D G R A+ + ++ + V ++HL Sbjct: 70 GIRADSRSGLAVLSRFPIRSTLSIPLPDHADD----GERAALVVEIDAPAGPLTVTNLHL 125 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 D L +Q Q + +I GDFN I N Sbjct: 126 THLAQND-----------LRQRQLAA----AQQVTKRPGTALIGGDFNAPIESFALNATG 170 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 W+ ID+ + + L Sbjct: 171 WRDCRSELGQPPQSTLTGQPDGP--------CIDHLLWAGRGRPPKTWRVDLDRLTR--- 219 Query: 285 IKSRGKRLSDHCPISIDY 302 +SDHC + +D Sbjct: 220 --DGQPAISDHCAVVVDL 235 >gi|196013219|ref|XP_002116471.1| hypothetical protein TRIADDRAFT_30983 [Trichoplax adhaerens] gi|190581062|gb|EDV21141.1| hypothetical protein TRIADDRAFT_30983 [Trichoplax adhaerens] Length = 284 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 36/273 (13%), Positives = 74/273 (27%), Gaps = 37/273 (13%) Query: 47 VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 + L + + D DI+ LQE+ KN + + + + HS Sbjct: 5 SPHRDERFKYLAEALRQSDYDIIGLQEVW--------LIKNYEALKVALKAVFPHSHYFY 56 Query: 107 NNDIHTAIAVRKKNVRVLQQSYP-----LLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 + I + + + V A + G + +++NG + V Sbjct: 57 SGKIGSGKCIFSRFPIVATSFTAYTLSGYPYALNHGDWLGKKGVGFCKIDVNGTILNVYV 116 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 H+ + + L I P ++ GD N + +G Sbjct: 117 THIHA-----EYNRDNDVYLPHRVTEIVQLSQLIRFTAG-NSPVILIGDLNFEPEDIGYR 170 Query: 222 ------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK------IPIDYFVMDQNAYKF 269 D ++ D ++ + + ++ IDY + + K Sbjct: 171 FITTSLDLKDAWLEAGDGVMLYTRNNIDYSDSLNTNSFTPANEIEKRIDYILYSGDHLKS 230 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 I SDH + + Sbjct: 231 ------QACQVTLGRIPDAAFNYSDHEGVEATF 257 >gi|241762981|ref|ZP_04761043.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN] gi|241367933|gb|EER62152.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN] Length = 431 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 52/327 (15%), Positives = 93/327 (28%), Gaps = 75/327 (22%) Query: 46 SVKRTTSDYTLLRQYAKN-LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104 + L Q + D++ QE+ A + + Sbjct: 112 TPSAYAKRGQQLSQVLARDVQPDVIAFQEVSGTKAAVEALGAAAGDYNVCSFDGK----- 166 Query: 105 DSNNDIHTAIAVRKKNVRVLQ--QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 A A RKK ++ + + ++ ++ R A + + +NGKK+ L + Sbjct: 167 --YKVQRLAFAWRKKFGEAVEACRDIHEVSLPEAPAKDQVRPAYTVTLNLNGKKVRFLTV 224 Query: 163 HLKSFCFLDSLENTYS------PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK-- 214 HLKS C N +C+LL QQ + L+ + + FV+ GDFNR Sbjct: 225 HLKSSCVSPLDRNPRRLDDASIEACALLQQQVRPLEAAFETLGQGVDHFVVLGDFNRNLA 284 Query: 215 ----------INYLGNNDDFWKTI------------------------------------ 228 D K + Sbjct: 285 HELNQVAGAEPTRSDGGTDLAKPLATGARTRNLLLEINDGQPASSKAALLLPKCPGSAAL 344 Query: 229 -----DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ------ESFSE 277 + ++ RN + +D+ ++ Q+ + F Sbjct: 345 EAACEASKTGVPTAEQQTLLGGKTGLGCRNPVGLDHILVSQSLAAAVSNTIKVSIGPFGG 404 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 L + +SDHCP+ D F Sbjct: 405 SLLPSVNRPDPLLAVSDHCPLVADVQF 431 Score = 36.8 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 7/28 (25%), Positives = 14/28 (50%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLW 43 T + A+ +R+ +WN+ + V W Sbjct: 20 STPAQAETLRIATWNLGWHVASDEVPAW 47 >gi|229587662|ref|YP_002869781.1| putative endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens SBW25] gi|229359528|emb|CAY46369.1| putative endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens SBW25] Length = 292 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 41/292 (14%), Positives = 83/292 (28%), Gaps = 58/292 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 ++RL+S+NI E + + + + D D+V L Sbjct: 28 PPDSRLRLLSFNIQVGISTEKYRHYLTRGWQHLLPHNGRAGNLQKIGNLLN--DFDLVAL 85 Query: 72 QEMGSYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE + + + + R+ + V + + +PL Sbjct: 86 QEADGGSMRSGYINQVEHLAQLGAFPYWYQQLNRNLGRLAQHSNGVLSRLKPTAIEDHPL 145 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G K R A+ + + + V+ +HL + Q + Sbjct: 146 PGPKG-------RGAILVRFGEGPEALVVVMMHLALG-------------ARTRTMQLAY 185 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 +++ I K V+ GD N N + N L + Sbjct: 186 IRELIGGYKHQ----VLMGDMNTHAND----------LLLNSPLRDLGLLAPQAEATFPS 231 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + +D+ ++ +Q I SDH P++++ Sbjct: 232 WRPQRCLDHILLSPTLTLESVQVLAQPI--------------SDHLPVAVEI 269 >gi|327271381|ref|XP_003220466.1| PREDICTED: sphingomyelin phosphodiesterase 2-like [Anolis carolinensis] Length = 409 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 77/271 (28%), Gaps = 35/271 (12%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 L+ D+V LQE+ S + W + S + I Sbjct: 27 QERVELIGDVLNQEGFDLVLLQEVWSEK--------DYWELKKKLCTCYPSSYYFKSGVI 78 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSF-----SRAGNRRAVELLVEINGKKIWVLDIHLK 165 + + V K+ + + + G + ++++I G + HL Sbjct: 79 GSGVCVFSKHQILDTFQHQYSVNGYPYMFQHGDWFGGKSVGLVVLKIKGIVFNIYVTHLH 138 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 + + S QA L +I + ++ GD N Sbjct: 139 AEYSREKDYY-----LSHRVVQAWELAQFIQHTCKGADVVLLGGDLNMHP-EDVVVRLLQ 192 Query: 226 KTIDPNDSLIRFPK---------EKDSRCNANKN----LRNKIPIDYFVMDQNAYKFLIQ 272 + DS I K + C NK I IDY + + ++ I+ Sbjct: 193 GWVGLQDSFITAEKVEGCEDGCTLVPANCFTNKKELQCFPQGIRIDYILY-KGLSQYEIR 251 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + E ++ SDH + + Sbjct: 252 CNSHETT--TGKAPNKDIPYSDHEAVMVTLS 280 >gi|326577094|gb|EGE26988.1| catabolite repression control protein [Moraxella catarrhalis O35E] Length = 335 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 87/310 (28%), Gaps = 69/310 (22%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-S 76 + Q +R+VS N+N L E + ++ +AD+V +QE + Sbjct: 68 QTANQVLRVVSINVNGLRAAEKKGFF---------------EWLAVSNADVVCIQESRIT 112 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + F W + ++ +A+ + V DS Sbjct: 113 HEQWTDKFRPKGWHTHLFAAQKAGYA----------GVAIYSRLPFVSVVDGLGFDLADS 162 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R +L + +++ ++L S + + + + + + Sbjct: 163 QGR-FICAQFDLSAQGIDHPVYIASLYLPSGSSGE-------EAQARKDLFLEKYRHILK 214 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEK 241 Q ++ ++ GD+N + + + I + + Sbjct: 215 QWRDENKSLIVCGDYNIVHKRIDIKNWSGNQKASGCLPHERAWLDHIYDELGYVDTFRVV 274 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + N+ IDY + K + + Sbjct: 275 RKDADIYSWWSNRGQARAKNVGWRIDYHACSPDWKKRTLNAWV-----------YKDSWF 323 Query: 293 SDHCPISIDY 302 SDH P+ IDY Sbjct: 324 SDHAPVIIDY 333 >gi|126733854|ref|ZP_01749601.1| exodeoxyribonuclease III, putative [Roseobacter sp. CCS2] gi|126716720|gb|EBA13584.1| exodeoxyribonuclease III, putative [Roseobacter sp. CCS2] Length = 262 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 31/307 (10%), Positives = 69/307 (22%), Gaps = 73/307 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L +WNIN R D + + ++ D++ LQE S Sbjct: 2 PFTLATWNIN--------------SVRLREDI--VAKLMRDEAPDVLCLQECKSPVDKIP 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + L + +A+ K V + G + Sbjct: 46 LAQFQS---------LGYTHMAARGQKGYNGVAIFSKIPMVEAGAEDYAGLGHARH---- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKES 201 + +E + + + + Q+ +L D + Sbjct: 93 ---IAGKLENG--------VTIHNHYVPAGGDVADREVNEKFGQKLDYLTDMRDAYHAQK 141 Query: 202 LVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD N D + + + + + Sbjct: 142 PTKSILVGDLNIAPREDDVWDHKKLLKVVSHTPVEVAHFADVMDAGAWSDVTRNDITDGK 201 Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ + ++ SDH Sbjct: 202 LYSWWSYRAKDWDAADKGRRLDHIWATPDIKNAAHSS-------RVLRDARGWEKPSDHA 254 Query: 297 PISIDYD 303 P+ +D Sbjct: 255 PVFATFD 261 >gi|15677903|ref|NP_275071.1| exodeoxyribonuclease [Neisseria meningitidis MC58] gi|218767349|ref|YP_002341861.1| putative nuclease [Neisseria meningitidis Z2491] gi|157883966|pdb|2JC5|A Chain A, Apurinic Apyrimidinic (Ap) Endonuclease (Nape) From Neisseria Meningitidis gi|7227344|gb|AAF42400.1| exodeoxyribonuclease [Neisseria meningitidis MC58] gi|121051357|emb|CAM07648.1| putative nuclease [Neisseria meningitidis Z2491] gi|316983973|gb|EFV62952.1| exodeoxyribonuclease III [Neisseria meningitidis H44/76] gi|319409609|emb|CBY89908.1| putative exodeoxyribonuclease [Neisseria meningitidis WUE 2594] gi|325139403|gb|EGC61943.1| exodeoxyribonuclease III [Neisseria meningitidis CU385] gi|325201128|gb|ADY96583.1| exodeoxyribonuclease III [Neisseria meningitidis H44/76] gi|325208932|gb|ADZ04384.1| exodeoxyribonuclease III [Neisseria meningitidis NZ-05/33] Length = 259 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S N+N + + +Y ADIV +QE+ + A Sbjct: 2 LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 KN + ++ +AV K +G R Sbjct: 47 DMKNPHGMHGHWHCAEKRG--------YSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + ++ V+ ++L S + + + + + K Sbjct: 95 F-----VRCDFGRLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNEGR 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248 V+ GD+N + + + + Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGY 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY ++ + + ++ SDH P+ Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 251 Query: 300 IDYDF 304 ++YD+ Sbjct: 252 VEYDY 256 >gi|153806611|ref|ZP_01959279.1| hypothetical protein BACCAC_00881 [Bacteroides caccae ATCC 43185] gi|149131288|gb|EDM22494.1| hypothetical protein BACCAC_00881 [Bacteroides caccae ATCC 43185] Length = 263 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 33/302 (10%), Positives = 82/302 (27%), Gaps = 73/302 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+N L L ++ + + DI+ LQE Sbjct: 2 MKIITYNVNGLRAAVSKGLP---------------EWLEQENPDILCLQETK-------- 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + ++ +A+ K + G R Sbjct: 39 LQPDQYPVEVFEALGYKSYLYSAQKKGYSGVALLTKQEP----DHVEYGMGMEAYDNEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + V+ ++ S D + + + + ++ + ++S Sbjct: 95 F-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEDFQKYVLELQKSRP 142 Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GD+N + +D W T I + Sbjct: 143 NLILCGDYNICHEPIDIHDPVRNAKNSGFLPEEREWMTRFLAAGFIDSFRMLYPEKQEYT 202 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY + + L+ SDHCP+ + Sbjct: 203 WWSYRFNSRAKNKGWRIDYCMASEPVRPLLMSARIL-----------NDAMHSDHCPMML 251 Query: 301 DY 302 + Sbjct: 252 EI 253 >gi|148556812|ref|YP_001264394.1| exodeoxyribonuclease III [Sphingomonas wittichii RW1] gi|148502002|gb|ABQ70256.1| Exodeoxyribonuclease III [Sphingomonas wittichii RW1] Length = 271 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 79/307 (25%), Gaps = 72/307 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +++++ ++NIN + L ++ + D+ LQE+ + + Sbjct: 11 PRRMKIATFNING----------------IKARLPRLVEWLEQKAPDVACLQEIKTSDE- 53 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + +A+ K + +++ L D Sbjct: 54 ---------TFPIAEIEAAGYGAIWHGQKGFNGVAILAKGAQPVERRKGLPDDPDPSHSR 104 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + E+NG + V I+L + + Y + L D Sbjct: 105 ------YIEAEVNG--VVVASIYLPNGNPAPGPKFDYKLA------WFDRLIDHAADLWA 150 Query: 201 SLVPFVIAGDFNRKIN-----------------YLGNNDDFWKTIDPNDSLIRFPKEKDS 243 +P V+AGD+N + ++ + Sbjct: 151 GEMPVVLAGDYNVIPTPSTDDVFSERAMASDALTQPESRAAFRRLCNAGWTDAVRTIHPH 210 Query: 244 RCNANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 ID+ ++ A L D ++ SDH Sbjct: 211 GPVYTFWDYQAGAWQRDAGFRIDHLMLSPAAADRLTGAGV-------DKDTRALEKASDH 263 Query: 296 CPISIDY 302 P I Sbjct: 264 APTWITL 270 >gi|260574370|ref|ZP_05842374.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sp. SW2] gi|259023266|gb|EEW26558.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sp. SW2] Length = 238 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 47/284 (16%), Positives = 80/284 (28%), Gaps = 57/284 (20%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NA 79 A+ + + S+NI+ K D + ADI+ LQE + Sbjct: 4 ARDLSVASYNIH-----------KGIGADRRRDLARTAAVIAEIGADILALQEADMRFGS 52 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 A + + + +RDS+ + VR + L G Sbjct: 53 RAGLLDLDRLRHDLGLVPVAVKGQRDSHGWHGNLLLVR-DTLVQEVHQLALPGL------ 105 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R A+ + I G+ + V+ HL + QAQ L + + Sbjct: 106 -EPRGALMTDLVIKGQPLRVISAHLGLLPGS-------------RAVQAQALLAKLNTLE 151 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-IPID 258 P ++ GD N W+ + A+ R +P+D Sbjct: 152 R--RPTLLMGDLNE-----------WRDTGSAAMGHFARHFTPASPRASYPARYPLLPLD 198 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ I +R SDH PI Sbjct: 199 RMMICDQGQLLDIAT----------HDSPLARRASDHLPIKARL 232 >gi|257870107|ref|ZP_05649760.1| exodeoxyribonuclease [Enterococcus gallinarum EG2] gi|257804271|gb|EEV33093.1| exodeoxyribonuclease [Enterococcus gallinarum EG2] Length = 261 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 74/304 (24%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + + + DAD LQE A Sbjct: 12 MKFISWNVNGLRAIVKKNF---------------LEAFETFDADFFCLQETK-LQAGQIE 55 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S A+A A R Sbjct: 56 LDLPGYTQYWNYAEKKGYSGTAIFAKEP-ALAAHYGIGIEE-------------HDAEGR 101 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ + + + ++ + Sbjct: 102 -----VITLEYPEFFLVTCYTPN-------AQNELRRLDYRMTWEDAFRAYL-TDLKQQK 148 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + T+ F Sbjct: 149 PVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEEREKFSTLLSAGFTDTFRYFYPDAEGIY 208 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + L+ + SDHCP+ Sbjct: 209 SWWSYRFNARKNNAGWRIDYFVVSDDLNDRLVDAKIHTEIL-----------GSDHCPVE 257 Query: 300 IDYD 303 + + Sbjct: 258 LQLN 261 >gi|229065513|ref|ZP_04200760.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603] gi|228715763|gb|EEL67537.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603] Length = 190 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 53/168 (31%), Gaps = 15/168 (8%) Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWIT- 196 R+ + G+ + V+ HL S + S Q AQ + ++ Sbjct: 27 TRKPLAAEFTFQGQNVVVISNHLNSKLGDATPFGKVQPLVLKSEEKRVQLAQEVNHFVQG 86 Query: 197 -QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 Q+K + P V+ GD N + + N Sbjct: 87 IQEKNTNAPVVVLGDMNDFEFSKPLEALEGTILKD-----MLNTVPKENRYTYIHEGNAQ 141 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D+ ++ N + + ++ +I R+SDH P+ + D Sbjct: 142 VLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGRVSDHDPVLVQID 185 >gi|149692696|ref|XP_001505181.1| PREDICTED: similar to APEX nuclease [Equus caballus] Length = 318 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 76/311 (24%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + + +++ SWN++ L + K DI+ LQE Sbjct: 53 TSPSGKSATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K+ + S + S+ + ++ + + + + G Sbjct: 98 KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R V ++ ++ + + + L Sbjct: 148 EEEHDQEGRVIVA-----EFDAFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ + L Sbjct: 255 HLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 306 --GSDHCPITL 314 >gi|114799308|ref|YP_761397.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas neptunium ATCC 15444] gi|114739482|gb|ABI77607.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas neptunium ATCC 15444] Length = 354 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 38/318 (11%), Positives = 84/318 (26%), Gaps = 53/318 (16%) Query: 16 CTASVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 + ++L+ WNI G L S + + ++ + D Sbjct: 44 PLPAAEAPLKLMIWNIGYSGLGEESDFQTDGGKMLRPPSREAVEKNLAGIQAVLREEAPD 103 Query: 68 IVFLQEMGSYNAVAKVFP--------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 I+ +QE+ + + + + +S++ + Sbjct: 104 ILMMQELAAPGFLTHTVDVLSGVKDALPGYGMVFSSDIRTRLLPGPLGLRHGLGTFAKVA 163 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 R +E++G ++++HL +F Sbjct: 164 GERTKLVRLTEEPEPIMGFIQRRYHVQVTELEVSGAPWVIINVHLSAFDEGAG------- 216 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG------------NNDDFWKT 227 QQ + + D + V+ GD+N ++ +D Sbjct: 217 ---TRMQQVREVLDLAQSHYQQGKAVVLGGDWNMRLAATDFAYQSDESALFWVHDFPRDA 273 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLR---NKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + P ++ P +R N ID F+ N + Sbjct: 274 LRPGWQIVIDPAVATTRTNEQPYKSGVNYTTIIDGFIASPNVTVEAV------------R 321 Query: 285 IKSRGKRLSDHCPISIDY 302 G ++DH P+ + Sbjct: 322 GLDLGFAITDHQPVVATF 339 >gi|329945926|ref|ZP_08293613.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 170 str. F0386] gi|328528374|gb|EGF55352.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 170 str. F0386] Length = 277 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 79/311 (25%), Gaps = 65/311 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ + N+N + + + ++ DI+ LQE+ + +A Sbjct: 1 MRIATVNVNGIRA---------------AARKGMGEWLTASAPDILLLQEVRADERIAAD 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV-----RVLQQSYPLLGAKDSFS 138 + R+ + +AVR+ + P D S Sbjct: 46 L-LPGYESAIWPCRIKGRAG--------VGVAVREGGPAGLGELRYGVAAPGTEEPDVDS 96 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + L +++ ++ +L S + L+ + D + Sbjct: 97 GRWLEADLTLTGLDGLERLTIISAYLHSGQLGTEKMDQKYAHLELVD---ARMADLLAAA 153 Query: 199 KESLVPFVIAGDFNRKINYLGNNDD-----------------FWKTIDPNDSLIRFPKEK 241 + S ++AGD N + Sbjct: 154 RNSGPQVLMAGDLNVVRSERDIKSWKPNHNKIAGVMDEEIAHLEGWFSSGWVDASRRLVG 213 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 D + IDY V+ + + D R Sbjct: 214 DEEQGPYTWWSQRGKAFDNNAGWRIDYQVITPALAERARSVAV-------DRAPDYASRW 266 Query: 293 SDHCPISIDYD 303 SDH P+ I+Y Sbjct: 267 SDHAPLVIEYS 277 >gi|161016801|ref|NP_034191.3| deoxyribonuclease-1 precursor [Mus musculus] gi|6166163|sp|P49183|DNAS1_MOUSE RecName: Full=Deoxyribonuclease-1; AltName: Full=Deoxyribonuclease I; Short=DNase I; Flags: Precursor gi|3172019|dbj|BAA28622.1| deoxyribonuclease I [Mus musculus] gi|109730889|gb|AAI15572.1| Deoxyribonuclease I [Mus musculus] gi|148664804|gb|EDK97220.1| deoxyribonuclease I, isoform CRA_b [Mus musculus] gi|148664805|gb|EDK97221.1| deoxyribonuclease I, isoform CRA_b [Mus musculus] gi|148664806|gb|EDK97222.1| deoxyribonuclease I, isoform CRA_b [Mus musculus] Length = 284 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 34/289 (11%), Positives = 86/289 (29%), Gaps = 34/289 (11%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +R+ ++NI T E + + + + DI +QE+ + V Sbjct: 20 AGTLRIAAFNIRTFGETKMSNATLSVY---------FVKILSRY--DIAVIQEVRDSHLV 68 Query: 81 A--KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 A K+ + + +++ + R V +L G + + Sbjct: 69 AVGKLLDELNRDKPDTYRYVVSEPLGRKSYKEQYLFVYRPDQVSILDSYQYDDGCEPCGN 128 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD-WITQ 197 +R + ++ I + + + L D ++ Sbjct: 129 DTFSREPAIVKFFSPYTEVQEFAIVPLH------------AAPTEAVSEIDALYDVYLDV 176 Query: 198 KKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 ++ + GDFN +Y+ ++ + + + + + Sbjct: 177 WQKWGLEDIMFMGDFNAGCSYVTSSQWSSIRLRTSPIFQWLIPDSADTTVTSTHCAY--- 233 Query: 257 IDYFVMDQNAYK-FLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302 D V+ + ++ S + + S + +SDH P+ + Sbjct: 234 -DRIVVAGALLQAAVVPNSAVPFDFQAEYGLSNQLAEAISDHYPVEVTL 281 >gi|298368758|ref|ZP_06980076.1| endonuclease/exonuclease/phosphatase family protein [Neisseria sp. oral taxon 014 str. F0314] gi|298282761|gb|EFI24248.1| endonuclease/exonuclease/phosphatase family protein [Neisseria sp. oral taxon 014 str. F0314] Length = 256 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 85/287 (29%), Gaps = 48/287 (16%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 V + S+N++ S + +L +D+ FLQE+ + Sbjct: 2 SPTPVTVTSYNMH----------KGMSALNRKVQLNSMADALHDLRSDVFFLQEVQGRHQ 51 Query: 80 VA----KVFPKNTWCIFYSTE--RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 FP+ F ++ K H A+ + + + Sbjct: 52 ARSNKIDGFPEQPHYDFLGERLSYNRSYGKNAVYPQRHHGNAILSRLPIETLHNLNIT-- 109 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 +R R + V G + ++ + ++Q + + + Sbjct: 110 ---VNRLEQRGVLHCEVLPEGWETSLVCLCAHLNLREPD-----------RAKQYRAIFE 155 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 +++ + P +IAGDFN + K ++ ++ F R + Sbjct: 156 YVSMHVDPASPLIIAGDFNDWREKSALS--LGKALNLDE---VFVDGNGRRPKTFPSRMP 210 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +D + + K + LSDH P+S+ Sbjct: 211 FLSLDRVYTRN----------LEVLDAQIHNNK-HWQHLSDHLPLSV 246 >gi|237795265|ref|YP_002862817.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum Ba4 str. 657] gi|229264066|gb|ACQ55099.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum Ba4 str. 657] Length = 352 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 106/321 (33%), Gaps = 64/321 (19%) Query: 22 QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +V++NI G +S ++T + + + K ++ +FLQE Sbjct: 53 DSFSIVTFNIGYGGMDDKQDFFMDGGKGSRSSSKEKTIENMREITSFLKKDNSSFIFLQE 112 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV---------- 123 + + + + F + + ++ ++ + S + + + K + V Sbjct: 113 VDTNS--TRSFRIDQYDYLKNSLKVYSSSMALNYKTPWVPVPILKPHGTVNAGLVNLSKY 170 Query: 124 -----LQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTY 177 + YP + +R +E + + NG+++ +++ HL ++ Sbjct: 171 KINSATRYQYPGKESWPRQLAELDRCFLESRISLENGRELVLINSHLSAYDKGG------ 224 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---------NDDFWKTI 228 + QQ +LK++I ++ + ++ GD+N I D K Sbjct: 225 ----KIRKQQLSFLKNYIIKEYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIP 280 Query: 229 DP--NDSLIRFPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + + + + ID F++ N + + + Sbjct: 281 NDFKPEGFKWVADKNVPTTRTDATPYKKGENFTAVIDGFLVSDNI--EVTSVKAHSMEFK 338 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 DH P+++++ Sbjct: 339 NT----------DHNPVNMEF 349 >gi|311064022|ref|YP_003970747.1| exodeoxyribonuclease III [Bifidobacterium bifidum PRL2010] gi|310866341|gb|ADP35710.1| Xth Exodeoxyribonuclease III [Bifidobacterium bifidum PRL2010] Length = 285 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 31/282 (10%), Positives = 71/282 (25%), Gaps = 42/282 (14%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNA-VAKVFPKNTWCIF----YSTERLINHSKRDS 106 + + +A DI +QE+ + + +F + + + + + Sbjct: 15 AKRKGIETWAGEHAPDIWCMQEVRAPQDELDPIFGEFGFEYATAGKIADQSELTAMNEVC 74 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 + + ++ +D S R + G I V +++ + Sbjct: 75 RVKGRAGVGLLTDLPVTARRYGLSGLDEDVDS---GRWIEADVTTPQGYGITVACVYVHA 131 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN---------- 216 D ++ L + + + V+ GDFN Sbjct: 132 GNSDDPVKMAQK--YRFLDTMLTRMGELRDEASRGGRQAVLCGDFNIAHTPLDIKNAKAN 189 Query: 217 ------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFV 261 + + + + + IDY Sbjct: 190 IKHAGFLPAERAYIDRWLGEYEFVDVIRSLAGDIQGPYTWWSQRGRAFDNNVGWRIDYQF 249 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + D S R SDH P+++ YD Sbjct: 250 ATPELAE-------TARGFVIDKAPSYDARWSDHAPLTVTYD 284 >gi|326774141|ref|ZP_08233423.1| exodeoxyribonuclease III [Actinomyces viscosus C505] gi|326636280|gb|EGE37184.1| exodeoxyribonuclease III [Actinomyces viscosus C505] Length = 277 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 80/310 (25%), Gaps = 65/310 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ + N+N + + + ++ DI+ LQE+ + +A Sbjct: 1 MRIATVNVNGIRA---------------AARKGMGEWLAASAPDILLLQEVRADEQIAVD 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV-----RVLQQSYPLLGAKDSFS 138 + R+ + +AVR+ + P D S Sbjct: 46 L-LPGYEAAIWPCRIKGRAG--------VGVAVREGGPATFGELRYGVAAPGTEEPDVDS 96 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + L +++ V+ +L S + L+ + L + Sbjct: 97 GRWLEADLSLTGFDGIERLTVISAYLHSGQLGTEKMDQKYAHLELVDARMAEL---LAAA 153 Query: 199 KESLVPFVIAGDFNRKINYLGNNDD-----------------FWKTIDPNDSLIRFPKEK 241 ++ V+AGD N + + Sbjct: 154 RDGGPQVVMAGDLNVVRSERDIKNWKPNHNKIAGVMDEEIAHLEGWFASGWVDASRHLVG 213 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 D + IDY V+ + + D R Sbjct: 214 DEEQGPYTWWSQRGKAFDNNAGWRIDYQVLTPALAERAHSVTV-------DRAPDYASRW 266 Query: 293 SDHCPISIDY 302 SDH P+ ++Y Sbjct: 267 SDHAPLVVEY 276 >gi|284033875|ref|YP_003383806.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283813168|gb|ADB35007.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 320 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 41/329 (12%), Positives = 95/329 (28%), Gaps = 61/329 (18%) Query: 24 VRLVSWNINTLSEQ-----------------EGVSLWKNSVKRT--------------TS 52 + + ++N+N L ++ + + +R + Sbjct: 3 LTVGTFNLNNLFDRWNFAGAVEVLAQGSSTVPATYTFDDEHRRRLQLDGRGKLLVSKPAA 62 Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 D + Q D D+ +QE+ + + + + ++ + + ++ Sbjct: 63 DTDRIAQRLLEADVDVWVVQEIENVDVLREFNREHLNGAYRHVMVIDG-----NDATRFI 117 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRA-GNRRAVELLVEINGKK--IWVLDIHLKSFCF 169 I + + SY + D SR +R VE+ + + + + V HLKS Sbjct: 118 DIGILSRRPIGGVTSYQRVFHPDLPSRPVFSRDLVEVEILDDRGRKLLTVFGTHLKSKFV 177 Query: 170 L---DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 + S L ++QA+ + I + + +++ GD N Sbjct: 178 DFTVPDPAAAAAESDLLRTRQAETITRIIASRMSTRQRYLLCGDMNDVPGSPTLAAFEQA 237 Query: 227 TIDPN-------DSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQES 274 + ++ + + R+ ID + L Sbjct: 238 GLVDALRTPKEVGAVKTKVELPTDPAWTSTFKASGQPRSFDLIDQIWLSPALAPKLTAAW 297 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +DH P I D Sbjct: 298 IG-------RRRKLARDGTDHDPAWISLD 319 >gi|330972149|gb|EGH72215.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 291 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 36/292 (12%), Positives = 81/292 (27%), Gaps = 58/292 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 ++RL+S+NI + + + + + D D+V L Sbjct: 30 PQDGRLRLLSFNIQVGISTQRYHHYLTRSWQHLLPHGGRAGNLQKIGDLIN--DFDLVAL 87 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE+ + + + R+ + V + + +PL Sbjct: 88 QEVDGGSMRSGFVNQVEHLAQLGGFPYWYQQLNRNLGRLAQHSNGVLSRLRPTKIEDHPL 147 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G R A+ + + V+ ++L ++Q + Sbjct: 148 PGPAG-------RGAILVRFGEGEDALVVVMMYLALGT-------------RTRTRQLAY 187 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 +++ I V+ GD N N L + + + Sbjct: 188 IRELIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 233 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + +D+ ++ +Q I SDH P++++ Sbjct: 234 WRPQRCLDHILLSPTLTLERVQVLAQPI--------------SDHLPVAVEI 271 >gi|317014940|gb|ADU82376.1| exodeoxyribonuclease III [Helicobacter pylori Gambia94/24] Length = 250 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++DAD+ +QE + + + Sbjct: 1 MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + + D R Sbjct: 42 QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGIDIKEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++++++ + S + + + L+ Sbjct: 91 -----VITCEFESFYLVNVYTPNSQQALSRLSYRMNWEVEFKKFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFSELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKNVGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|285017645|ref|YP_003375356.1| hypothetical protein XALc_0850 [Xanthomonas albilineans GPE PC73] gi|283472863|emb|CBA15368.1| conserved hypothetical protein [Xanthomonas albilineans] Length = 255 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 39/294 (13%), Positives = 86/294 (29%), Gaps = 56/294 (19%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQYAKNLDADIV 69 TA + +R+++ NI S S + R + + Q A DIV Sbjct: 2 TAPATRTLRVLTANIQAGSSTRRYSDYVTRSWSHALPAGRKRNSLDTIAQLASAH--DIV 59 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSY 128 LQE + + + + + +H R +A + + + Q + Sbjct: 60 GLQESDPGSLRSGFTNQTHYLAERAGFHYWSHQPNRRVGGVASSANGLLSRLEPLEVQDH 119 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 L G R G R + + + + HL + + Q Sbjct: 120 ALPG------RLGGRGVLLAKFGDGNEGLAIAVAHLSLG-------------ATSRTMQL 160 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ + + + ++ GDFN + ++ P Sbjct: 161 AFIAELLADHPNA----ILMGDFNCVADRPEM-QLLYQRTRLQPPACVVP--------TF 207 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + R + ID+ ++ + + ++ SDH ++ + Sbjct: 208 PSWRPQRAIDHILLSDSLRC--------------NAHRAVPAAFSDHLALTTEI 247 >gi|227502111|ref|ZP_03932160.1| endonuclease/exonuclease/phosphatase [Corynebacterium accolens ATCC 49725] gi|227077170|gb|EEI15133.1| endonuclease/exonuclease/phosphatase [Corynebacterium accolens ATCC 49725] Length = 905 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 99/337 (29%), Gaps = 62/337 (18%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY---------------------TLLRQY 60 + + ++N+ G ++ + + Sbjct: 492 GEYTIGAFNVLNYFTSLGEEYGGSAYTDREGNKVTVNRGKTRGAYTESALQDQERKIVAA 551 Query: 61 AKNLDADIVFLQEMGS-----------YNAVAKVFPKNTWCIFYSTERLINHSKRD---- 105 LDAD++ L E+ A+ ++ K + +D Sbjct: 552 INGLDADVIGLSEIEDGYAVTGDFNQRDKALKRLTEKLNEAAGSEKWAFVPSPSKDQVPE 611 Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 + I TA K V+ + +S + S + ++ + + + H K Sbjct: 612 RPDVIRTAFIYHKDVVKPVGESRIFQDPRFSGTAREPLAQEFQPLKSDDESFVAVANHFK 671 Query: 166 SFC----FLDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLGN 220 S + + + ++ + QAQ + D + ++ + P GDFN + Sbjct: 672 SKGSVAKGDEDSGDGQGNNPNVRNAQAQAVLDALHKQDDWKDKPLFALGDFNTYTHETAL 731 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 + + ND ++ + + + +D+ + ++ A L I Sbjct: 732 D------VFRNDGFTVPAEKYGADT-SYQFGGLLGTLDHVLANEVASGALADAQVWNINA 784 Query: 281 NEDDIKSRGKR--------------LSDHCPISIDYD 303 +E +R SDH P+ + + Sbjct: 785 DEPVAFEYSRRNYNVVDFYDDSPFRASDHDPVKVGFT 821 >gi|21225866|ref|NP_631645.1| hypothetical protein SCO7604 [Streptomyces coelicolor A3(2)] gi|11322393|emb|CAC16706.1| hypothetical protein [Streptomyces coelicolor A3(2)] Length = 294 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 33/285 (11%), Positives = 73/285 (25%), Gaps = 61/285 (21%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA--- 81 R+++WN+ S+ ++ +QE + + Sbjct: 63 RVMTWNLCN--------------PCDASNLDR-AAEIAAHAPQVIGMQEACARDVDRIRD 107 Query: 82 --KVFPKNTWCIFY-STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + F + + + S + + N A+ + Sbjct: 108 YLEAFHGLVYHVAHGSVLQNWSRCGGAPWNPGGFGQAILSAAPITDAVNVEYPDGG---- 163 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + +R + + E+ G+ + V + HL + Q + L + + Sbjct: 164 -SEDRGYLAVTTEVGGRSVRVFNTHL-----------AQRRQEEFRTDQVRVLAKEVARH 211 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + + ++ GDFN D W D C + + D Sbjct: 212 ERA----IVVGDFNAVP-EASELDPMWSLATDTDPQCHPAPG--GTCEPTTDWQ--SKFD 262 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 Y + + + SDH + D D Sbjct: 263 YVFLRG-----VAPREHRVVRTAH----------SDHDLLYADLD 292 >gi|157125734|ref|XP_001660755.1| neutral Sphingomyelinase, putative [Aedes aegypti] gi|108882608|gb|EAT46833.1| neutral Sphingomyelinase, putative [Aedes aegypti] Length = 420 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 39/298 (13%), Positives = 83/298 (27%), Gaps = 40/298 (13%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++ +++ NI + + + + DIV LQE+ S + Sbjct: 2 ALELSVLTLNIWGIPYVSKDRA---------VRVEAIGDVLSSGNYDIVSLQEVWSDSDY 52 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD----- 135 + + + ++ + +A+ + V + Sbjct: 53 QYLKKRVEGVLPFAHYFYSGVVG--------SGLALLSRYPIVSALFHAWSVNGYVHRIQ 104 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 G + + +N + + V HL + + + QA +I Sbjct: 105 HGDWFGGKGVGLAKIAVNDQLVNVYAAHLHA-----EYDRKCDDYMAHRVIQAYDTAQFI 159 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCN 246 + + V ++AGD N + L D K + L ++S + Sbjct: 160 ESTRGNAVMQILAGDLNTEPGDLAYRVLQTNAKLIDTADKKLYAAGHLGTNEIGRNSYTD 219 Query: 247 ANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + IDY + + L D I + SDH + Sbjct: 220 PETGKKYPQGKRIDYIMYR--IGEHFEGRLLEHRLPLPDRIPGKDISYSDHEAVYAKI 275 >gi|282880102|ref|ZP_06288822.1| exodeoxyribonuclease III [Prevotella timonensis CRIS 5C-B1] gi|281305975|gb|EFA98015.1| exodeoxyribonuclease III [Prevotella timonensis CRIS 5C-B1] Length = 249 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 78/303 (25%), Gaps = 79/303 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + ++ + LDAD LQE Sbjct: 1 MKFISWNVNGLRACVKKNFQES---------------FQQLDADFFCLQETKMQEG-QLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K+ + + D R Sbjct: 45 LQFPGYTSYWNYAEKKGY----------SGTAIYTKHKPIHVSYGLGIEEHDQEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ +++ + + L Sbjct: 91 -----VITLEMEDFFLITVYVPNSQDELKRLDYRMKWEDDFRAYITQLDQI--------K 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P +I GD N + + N + F + Sbjct: 138 PVIICGDLNVAHEEIDLKNPKTNKRNAGFTDEERNKMTRLLDNGFIDTFRYLYPEQI-TY 196 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ + + L + SDHCP+ Sbjct: 197 SWWSYRFRAREKNAGWRIDYFLISERLKERLHDAKIHTEI-----------MGSDHCPVE 245 Query: 300 IDY 302 ++ Sbjct: 246 LEL 248 >gi|239999924|ref|ZP_04719848.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae 35/02] gi|240116863|ref|ZP_04730925.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae PID1] gi|268595731|ref|ZP_06129898.1| exodeoxyribonuclease [Neisseria gonorrhoeae 35/02] gi|268602539|ref|ZP_06136706.1| nuclease [Neisseria gonorrhoeae PID1] gi|293397969|ref|ZP_06642175.1| exodeoxyribonuclease III [Neisseria gonorrhoeae F62] gi|268549120|gb|EEZ44538.1| exodeoxyribonuclease [Neisseria gonorrhoeae 35/02] gi|268586670|gb|EEZ51346.1| nuclease [Neisseria gonorrhoeae PID1] gi|291611915|gb|EFF40984.1| exodeoxyribonuclease III [Neisseria gonorrhoeae F62] gi|317165222|gb|ADV08763.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae TCDC-NG08107] Length = 259 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 79/305 (25%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S N+N + + +Y ADIV +QE+ + A Sbjct: 2 LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEA-DLS 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ +AV K +G R Sbjct: 46 ADMKNPHGMHGYWHCA-------EKRGYSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + ++ V+ ++L S + + + + + K Sbjct: 95 F-----VRCDFGRLGVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNEGR 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248 V+ GD+N + + + + Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVMHTLGWTDMWRTLYPDVPGY 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY ++ + + ++ SDH P+ Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 251 Query: 300 IDYDF 304 ++YD+ Sbjct: 252 VEYDY 256 >gi|257067959|ref|YP_003154214.1| metal-dependent hydrolase [Brachybacterium faecium DSM 4810] gi|256558777|gb|ACU84624.1| metal-dependent hydrolase [Brachybacterium faecium DSM 4810] Length = 270 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 87/295 (29%), Gaps = 42/295 (14%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + +++++ NI S + +R L + DAD+V QE+ Sbjct: 3 TAETSALKVLTQNIRFHSADTRSGEADHWPERAPV----LAHLLREADADVVGAQEV--- 55 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY-----PLLG 132 +A P + + ERL + + + R++ + P L Sbjct: 56 --LASQLPVLDEALGATHERLGIGREGGGRGEHNLLFLRRERFEVRDWDQFWLSEQPALI 113 Query: 133 AKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + R AV V +G++I + HL ++ A+ Sbjct: 114 GSVGWDGHCPRIAVWARVLDRASGQEIVLAVTHLDH------------AGELARARGAEL 161 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW-KTIDPNDSLIRFPKEKDSRCNANK 249 L + + + P V+ GDFN D ++ + +D + Sbjct: 162 LAARLREAAGA-APLVLMGDFNAAGGQSAAWDVLREAGLEDAHDVAAAHDGQDIGTFPDY 220 Query: 250 NLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ + Y + G+ SDH +S Sbjct: 221 GAPEPGGTRIDWIL----------SRGLDVEQYRAWVPQLGGRAASDHATVSARL 265 >gi|160884105|ref|ZP_02065108.1| hypothetical protein BACOVA_02081 [Bacteroides ovatus ATCC 8483] gi|156110447|gb|EDO12192.1| hypothetical protein BACOVA_02081 [Bacteroides ovatus ATCC 8483] Length = 361 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 87/305 (28%), Gaps = 67/305 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++++S+N+ + + E + Y + +ADI+ LQE + Sbjct: 99 GSIKILSYNVMSFNNLEKKDGKNP-----------VLSYLVDSNADIICLQEYNTATNKK 147 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + ++ + H + +A K + + + Sbjct: 148 YLTEQDIKKALKAYPYQSVHQQG----KGDVQLACFSKFPILSIHPIEYESNYNGSMKY- 202 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------- 178 ++ +N + +++ HL+S Y Sbjct: 203 -------VLNVNNDTLTLINNHLESNKLTKEDRGMYEDMIKDPNAKKVKTGLRQLIRKLA 255 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + ++ + QA + I + K ++ GDFN + + + +D F Sbjct: 256 EASAIRATQADSVAKTIAESKYPTT--IVCGDFNDG-SISYTHRILTQKLDD-----AFT 307 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + ID ++ N + + R + SDH PI Sbjct: 308 QSGKGLGISYNQNKFYFRIDNILISPNLKAY-------------NCTVDRSIKASDHYPI 354 Query: 299 SIDYD 303 Sbjct: 355 WCYIS 359 >gi|149199714|ref|ZP_01876746.1| endonuclease/exonuclease/phosphatase family protein [Lentisphaera araneosa HTCC2155] gi|149137231|gb|EDM25652.1| endonuclease/exonuclease/phosphatase family protein [Lentisphaera araneosa HTCC2155] Length = 319 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 45/330 (13%), Positives = 94/330 (28%), Gaps = 56/330 (16%) Query: 4 KYVLALVFFLVPCTASVAQ----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 K + L F V ++ AQ K+R++S+NI E G + + + Sbjct: 5 KLAIFLTFIQVFACSAYAQGKQAKLRVMSYNIYRGGEMFG------------RELSQTAK 52 Query: 60 YAKNLDADIVFLQEMGSYNAV--AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + +ADIV +QE S K+ W + + I + + ++ + ++ Sbjct: 53 VIQEAEADIVGIQEPRSPKGFTTQKLAKLLDWNHSSNIRKGIILTPYEIIENLDGGVKIK 112 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 Q + + + + + + F+ + Sbjct: 113 LP----TGQEVYAFSLHLPSHPYQPYQLLGIRPKWHKNT--------NNIEFIKTEAEAI 160 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP------- 230 + + + L I+ + P + GDFN + P Sbjct: 161 EWAKKARGAEIKKLLKVISSLPDKEAPVFVVGDFNEPSHLDWTEAAAKAGRHPIKVAYPN 220 Query: 231 ---------NDSLIRFPKEKDSRCNANKNLRNKI--------PIDYFVMDQNAYKFLIQE 273 +DS ++ + + K ID+ K + Sbjct: 221 SVAMVKAGFSDSYRVIYPDEMKNPGLTWSPKYKADDPTTHLDRIDFVYFKGKGLKVTDAK 280 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 E N D + + SDH + + Sbjct: 281 IIGENSENADIVVTP--YPSDHRAVVATFT 308 >gi|6980832|pdb|1DEW|A Chain A, Crystal Structure Of Human Ape1 Bound To Abasic Dna gi|6980833|pdb|1DEW|B Chain B, Crystal Structure Of Human Ape1 Bound To Abasic Dna Length = 279 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +++ SWN++ L + K DI+ LQE Sbjct: 14 TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 58 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K+ + S + S+ + ++ + + + + G Sbjct: 59 KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 108 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D R V ++ ++ + + + L Sbjct: 109 DEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 161 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 162 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 215 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ + L Sbjct: 216 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 266 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 267 --GSDHCPITL 275 >gi|260495692|ref|ZP_05815815.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_33] gi|260196757|gb|EEW94281.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_33] Length = 253 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 79/301 (26%), Gaps = 78/301 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + + Y +ADI LQE +A Sbjct: 1 MKLISWNVNGIRA---------------AIKKGFLDYFNEQNADIFCLQETK-LSAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + G R Sbjct: 45 LELKGYHQYWNYAEKKGY----------SGTAIFTKQEPLSVS----YGLGIEEHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +K +++ ++ + + ++ ++ Sbjct: 91 -----VITLEFEKFYMVTVYTPN-------SKDELLRLDYRMVWEDEFRKYLKNLEKKK- 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V GD N + + + + F + Sbjct: 138 PVVACGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKFTELLDSGFIDTFRYFYPNLEQVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + K L+ + SDHCP+ Sbjct: 198 SWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEIHTQI-----------EGSDHCPVV 246 Query: 300 I 300 + Sbjct: 247 L 247 >gi|254490888|ref|ZP_05104071.1| endonuclease/exonuclease/phosphatase family [Methylophaga thiooxidans DMS010] gi|224464060|gb|EEF80326.1| endonuclease/exonuclease/phosphatase family [Methylophaga thiooxydans DMS010] Length = 228 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 71/283 (25%), Gaps = 57/283 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA- 81 +++L S+NI+ +G + L AD++ LQE+ + Sbjct: 2 QLKLASYNIHACIGTDGQFDPF-----------RIAAVINELGADVIALQEVEHHLVNDI 50 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + H A+ + Q L S Sbjct: 51 DLLDFLAQQTGMIALAGPTMLRES----RHYGNAILTRLTPESHQLLDL-----SLEDNE 101 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R ++L + I+ ++ V HL Q Q + K Sbjct: 102 PRGVIQLSLNIDDHRLLVYATHLGLKPV-------------ERRFQVQKILSLFETKTAD 148 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 V+ GD N + D + +D Sbjct: 149 TT--VLMGDLNEWFLWGRPLRWLKAYFD---------ITPAINSFPSFWPFF--ALDRVW 195 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +L + K+ SDH P++ D F Sbjct: 196 VTPR----------HHLLNVSAHKTALAKKASDHLPVTADITF 228 >gi|148379821|ref|YP_001254362.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A str. ATCC 3502] gi|153932125|ref|YP_001384119.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A str. ATCC 19397] gi|153935873|ref|YP_001387659.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A str. Hall] gi|148289305|emb|CAL83401.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A str. ATCC 3502] gi|152928169|gb|ABS33669.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A str. ATCC 19397] gi|152931787|gb|ABS37286.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A str. Hall] Length = 352 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 101/311 (32%), Gaps = 44/311 (14%) Query: 22 QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +V++NI G +S ++T + + + K ++ +FLQE Sbjct: 53 DSFSIVTFNIGYGGMDDKQDFFMDGGKGSRSSSKEKTMENMRGITSFLKKDNSSFIFLQE 112 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV------LQQS 127 + + + + F + + ++ + + S + + + K + V L + Sbjct: 113 VDTNS--TRSFRIDQYDYLKNSLKAYSSSMALNYKTPWVPVPILKPHGTVNAGLVNLSKY 170 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 + + + ++ + V + + ++S + Y + QQ Sbjct: 171 KINSATRYQYPGKESWPRQLAELDRCFLESRVSLENNRELVLINSHLSAYDKGGKIRKQQ 230 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---------NDDFWKTIDP--NDSLIR 236 +LK++I ++ + ++ GD+N I D K + + Sbjct: 231 LSFLKNYIIKEYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKW 290 Query: 237 FPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID F++ N ++ Y+ + + Sbjct: 291 VADKNVPTTRTDATPYKKGENFTAVIDGFLVSDNIEATSVKA------YSMEFKNT---- 340 Query: 292 LSDHCPISIDY 302 DH P+ +++ Sbjct: 341 --DHNPVKMEF 349 >gi|134299043|ref|YP_001112539.1| exodeoxyribonuclease III [Desulfotomaculum reducens MI-1] gi|134051743|gb|ABO49714.1| Exodeoxyribonuclease III [Desulfotomaculum reducens MI-1] Length = 264 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 85/305 (27%), Gaps = 72/305 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K + S+N+N S LL ++ D++ LQE Sbjct: 2 KFTVASFNVN----------------SIRSRKELLLEWLLTNCPDVICLQE---TKVRDI 42 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP++ + + +A+ + PL + G Sbjct: 43 DFPEDFFK-------EKGFHAIYKGQKSYNGVAILSPHPIT-----PLNSDLGDVAEPGE 90 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + V K I +++ ++ ++S + +Y S + ++D+ S Sbjct: 91 ARLLAASV----KGIPIINTYIPQGQAVNSPKFSYKLS------WIKSMRDYFNTNYLST 140 Query: 203 VPFVIAGDFNRKINYLGNNDD--------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 +P + GDFN +D + + Sbjct: 141 LPLLWMGDFNVAPEPKDVHDPKRLYGKVGFHPEEHLALQYVKEWGFQDVFRMHEPEAGHF 200 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ ++ K + D R ++ SDH I Sbjct: 201 TFWDYRIPKGVERNLGWRIDHIWATESLAKRSTRAWI-------DMEPRRREKPSDHTLI 253 Query: 299 SIDYD 303 +++ Sbjct: 254 LAEFE 258 >gi|317010103|gb|ADU80683.1| exodeoxyribonuclease III [Helicobacter pylori India7] Length = 250 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 81/303 (26%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N L + ++DAD+ +QE + + + Sbjct: 1 MKLVSWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + + D R Sbjct: 42 QNTFEFKGYFDFWNCA-------IKKGYSGVVTFSKKEPLSVSYGINIEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + ++++++ + S N + + L+ Sbjct: 91 -----VVTCEFESFYLVNVYTPNSQQALSRLNYRMSWEVEFKKFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFSELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|256391129|ref|YP_003112693.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM 44928] gi|256357355|gb|ACU70852.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM 44928] Length = 802 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 36/335 (10%), Positives = 81/335 (24%), Gaps = 67/335 (20%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A+ A+ + + ++N+ L+ + S ++ ++ DIV ++E+ Sbjct: 483 ANPAKDLSVATYNVENLAPSDPDSKFQRLGAGIVTNLAT---------PDIVSVEEVQDN 533 Query: 78 NAVAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + + + + +I T Sbjct: 534 SGATDDGTVAADQTLTKLTAAIAAAGGPKYAWREIDPANDKDGGQPGGNIRTVFLYNPAR 593 Query: 118 ---------------------KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK 156 K+ P + +R+ + G Sbjct: 594 VTFVDTGAASVNRTTTGTQVVSKHGEPALSLSPGRIDPANPVWNSSRKPLVGQFSFRGHD 653 Query: 157 IWVLDIHLKSFCFLDSLENT----YSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGD 210 ++V+ H + + + S S QAQ D++ + + V+ GD Sbjct: 654 VFVIANHFDAKLGDQNQDGRFQYPAQSSALQRSGQAQVEHDFVQKLLDVDKKADVVVVGD 713 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC---NANKNLRNKIPIDYFVMDQNAY 267 N + T D I +D+ ++ + Sbjct: 714 LNDYQFSPALSSLRTGTSDGTGPSILTDLISTLPTNEQYTYDYEGVSEVLDHILVSKGIK 773 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 Q + SDH P + Sbjct: 774 DLSYQV--------VHVNAEYTDQASDHDPQVVRI 800 >gi|254486587|ref|ZP_05099792.1| exodeoxyribonuclease III [Roseobacter sp. GAI101] gi|214043456|gb|EEB84094.1| exodeoxyribonuclease III [Roseobacter sp. GAI101] Length = 290 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 31/308 (10%), Positives = 70/308 (22%), Gaps = 71/308 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + L +WNIN ++ + + DI+ LQE S Sbjct: 28 SMAFTLATWNIN----------------SVRLREPIVLKLLQEQGPDILCLQECKSP--- 68 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K F + + +A+ + + Sbjct: 69 ---VDKIPTEAFAAA---GYTHMVARGQKGYNGVAILSRLPLEDVGDQDFADLGHARH-- 120 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 V +E + + + ++ + D + + ++DW K Sbjct: 121 -----VAARLENG---VTIQNFYVPAG--GDVADREVNEKFGQKLDYLAGMRDWFRGDKP 170 Query: 201 SLVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ GD N ++ + I ++ Sbjct: 171 RKS--ILVGDLNIAPREDDVWGHKQLLKVVSHTPIEVEKLAETQDAGGFIDITRQDIPEG 228 Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 N + +D+ + ++ SDH Sbjct: 229 NLYSWWSYRAKDWDAADKGRRLDHVWATPDISNAAHSS-------RVLRDARGWEKPSDH 281 Query: 296 CPISIDYD 303 P+ +D Sbjct: 282 APVFATFD 289 >gi|163860141|gb|ABY41236.1| probable endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens] Length = 292 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 38/298 (12%), Positives = 82/298 (27%), Gaps = 58/298 (19%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLD 65 + ++RL+S+NI E + + + + K D Sbjct: 22 VTSTGLPGDSRLRLLSFNIQVGISTERYRHYLTRGWQHLLPHTGRAGNLQKIGDLLK--D 79 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVL 124 D+V LQE + + + R+ + V + Sbjct: 80 FDLVALQEADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRNLGRLGQHSNGVLSRLRPWA 139 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + +PL G K R A+ + + V+ +HL Sbjct: 140 IEDHPLPGPKG-------RGAILARFGEGPEALVVVMMHLALG-------------ARTR 179 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + Q ++++ I K ++ GD N + + L Sbjct: 180 TMQLAYIRELIGGYKHQ----ILMGDMNTHASD----------LLQTSPLRDLGLLAPQL 225 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + R + +D+ ++ ++ I SDH P++++ Sbjct: 226 EATFPSWRPQRCLDHILLSPTLTLERVEVLAQPI--------------SDHLPVAVEI 269 >gi|154502978|ref|ZP_02040038.1| hypothetical protein RUMGNA_00800 [Ruminococcus gnavus ATCC 29149] gi|153796517|gb|EDN78937.1| hypothetical protein RUMGNA_00800 [Ruminococcus gnavus ATCC 29149] Length = 250 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 78/303 (25%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + ++ + DADI LQE A Sbjct: 1 MKLISWNVNGIRACVQKGF---------------LEFFREADADIFCLQETK-LQAGQIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ AV K + + D R Sbjct: 45 LDLEGYEQYWN----------YAVKKGYSGTAVFTKKKPLNVTYGIGIEEHDQEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++ + + ++ + + + S + L++ Sbjct: 91 -----VITLEFEEFYFVTVYTPNSQNELARLDYRMKWESDFLAYLKKLEE--------EK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + F + Sbjct: 138 PVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKFTEMLNAGFIDTFRYFYPDQEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + L SDHCPI Sbjct: 198 SWWSYRFSARAKNAGWRIDYFCVSECLKDRLADAKILT-----------DVMGSDHCPIE 246 Query: 300 IDY 302 +D Sbjct: 247 LDL 249 >gi|86159084|ref|YP_465869.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans 2CP-C] gi|85775595|gb|ABC82432.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans 2CP-C] Length = 300 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 37/286 (12%), Positives = 77/286 (26%), Gaps = 38/286 (13%) Query: 24 VRLVSWNINTLSEQEGVSLWKN------SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 VR+VSWN++ L + + + + + LD D+V LQE+ + Sbjct: 43 VRVVSWNVHDLFDDLDRTEPPGALDTVATAGEVDARLARVAAVLGRLDGDLVLLQEVETA 102 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + + E +AV + S+ + Sbjct: 103 ALAEALAARAGYAQARLVEGNDPRG---------IDVAVLSRLPLRAYVSHRDERDA-AG 152 Query: 138 SRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R VE G+ + ++ HL S D + ++ Sbjct: 153 RPLFPRDCVEAHAALPGGRTLALVGSHLSSALSDDGTRRAAQAARM---------REIAD 203 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + V GD N + + ++ Sbjct: 204 RLLRDGARVVAGGDLNDEAGSF----ALGPLFGDGAWVDPAAALPPDAAWTWSGGGDRAA 259 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D+ + + ++Q + + SDH P+ +D Sbjct: 260 LDHLAVPRADAASVVQA--------AVAGGTDVEAASDHRPVVLDL 297 >gi|295691916|ref|YP_003600526.1| exodeoxyribonuclease iii [Lactobacillus crispatus ST1] gi|295030022|emb|CBL49501.1| Exodeoxyribonuclease III [Lactobacillus crispatus ST1] Length = 275 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 82/303 (27%), Gaps = 56/303 (18%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L+SWNI++L+ + R +L + + + DI+ +QE Sbjct: 3 LISWNIDSLNA-----ALTGTSARAEETRQVLTK-IHDANPDIIAIQETKLRATGPTKKH 56 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 K + + S + + K S P++GA + G Sbjct: 57 KEVLAEKFPEYDYVWRSSEEPARKGYAGTMYLYKKGLTPAVSEPIIGAPEPMDHEGR--- 113 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++ + K +V ++ + + Q L + P Sbjct: 114 ---IITLEFDKYFVTQVYTPNSGSGLKRLAERQVWDQKYIEYLQKL--------DEKKPV 162 Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + +GD+N + + F K + Sbjct: 163 LASGDYNCAHTEIDLKHPENNHHSAGFTDEERVDFTNLLNAGFTDTFRKVHGEITDVYSW 222 Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY+++ +++ + DHCPI + Sbjct: 223 WAQRVRTAKANNSGWRIDYWLVSNRIADKVVRSEMIDTGKRA-----------DHCPILL 271 Query: 301 DYD 303 + + Sbjct: 272 EIN 274 >gi|256833636|ref|YP_003162363.1| exodeoxyribonuclease III Xth [Jonesia denitrificans DSM 20603] gi|256687167|gb|ACV10060.1| exodeoxyribonuclease III Xth [Jonesia denitrificans DSM 20603] Length = 264 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 69/305 (22%), Gaps = 69/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL SWNIN + + D D++ LQE + Sbjct: 1 MRLASWNIN----------------SIRARTDRALAVLERHDIDVLALQETKCKDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGN 142 + + + +A+ + +P Sbjct: 41 ------QFPVAAFEEAGYEVAHVGVNQWNGVALISRVGLDDVHRAFPGQPGFGEDPVVEA 94 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + V +++ + +D Y Q LK+ Q Sbjct: 95 RAVGAIC-----GGVRVWSLYVPNGREIDHPHYHYK------LQWLHQLKNSAQQWTADD 143 Query: 203 VP--FVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + GD+N + + Sbjct: 144 PAAQVALVGDWNVAPRDTDVWDREFFEGKTHVTDPERAAFAAFGDIGYTEVSRVHVPEDV 203 Query: 246 NANKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + ID+ K + D + +GK SDH P+ Sbjct: 204 YTYWDYQQLRFPKNQGMRIDFAWCSPALTKRVTGVEI-------DRNERKGKGASDHVPV 256 Query: 299 SIDYD 303 +D Sbjct: 257 ILDIS 261 >gi|168184533|ref|ZP_02619197.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum Bf] gi|182672340|gb|EDT84301.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum Bf] Length = 352 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 105/321 (32%), Gaps = 64/321 (19%) Query: 22 QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +V++NI G +S ++T + + + K ++ +FLQE Sbjct: 53 DSFSIVTFNIGYGGMDDKQDFFMDGGKGSRSSSKEKTIENMREITSFLKKDNSSFIFLQE 112 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV---------- 123 + + + + F + + ++ + + S + + + K + V Sbjct: 113 VDTNS--TRSFRIDQYDYLKNSLKAYSSSMALNYKTPWVPVPILKPHGTVNAGLVNLSKY 170 Query: 124 -----LQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTY 177 + YP + +R +E + + NG+++ +++ HL ++ Sbjct: 171 KINSATRYQYPGKESWPRQLAELDRCFLESRISLENGRELVLINSHLSAYDKGG------ 224 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---------NDDFWKTI 228 + QQ +LK++I ++ + ++ GD+N I D K Sbjct: 225 ----KIRKQQLSFLKNYIIKEYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIP 280 Query: 229 DP--NDSLIRFPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + + + + ID F++ N + + + Sbjct: 281 NDFKPEGFKWVADKNVPTTRTDATPYKKGENFTAVIDGFLVSDNI--EVTSVKAHSMEFK 338 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 DH P+++++ Sbjct: 339 NT----------DHNPVNMEF 349 >gi|332885280|gb|EGK05531.1| exodeoxyribonuclease III [Dysgonomonas mossii DSM 22836] Length = 254 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 90/305 (29%), Gaps = 75/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+N+N + L Q+ + DI+ LQE+ + V Sbjct: 1 MKVISYNVNGIRAAVNKG---------------LYQWLEQESPDILCLQEIKAMEDQIDV 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + N+ + ++ + + K L + + D R Sbjct: 46 LTIQSLGY--------NYYFHPAEKKGYSGVGILTKRTPDLVKIGMGIPDYDREGR---- 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + V+ +++ S D ++ + + +I ++ Sbjct: 94 -----VLRADYGDVTVICVYIPSGTMGDIRQD-------IKMKFLADFTHFINNLRKERP 141 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GD+N +L ++ + F S Sbjct: 142 ELIICGDYNICHKPIDINHPERHTKSSGFLPEERQWFDEFIDTGLIDTFRVYDQSPEK-Y 200 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDY ++ + A L + +Y SDHCP+ Sbjct: 201 SWWSYRAGARGKNLGWRIDYHIITEEARPRLNNAAILSEIY-----------FSDHCPVV 249 Query: 300 IDYDF 304 ++ F Sbjct: 250 VEMSF 254 >gi|320094390|ref|ZP_08026175.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 178 str. F0338] gi|319978676|gb|EFW10234.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 178 str. F0338] Length = 275 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 27/267 (10%), Positives = 65/267 (24%), Gaps = 43/267 (16%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + + + +QE+ + +++ W + R+ + IAV + Sbjct: 23 DWLEEAAPTALLMQEVRAPEEISRGILPGQWDSVWVPCRIKGRAG--------VGIAVHR 74 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 ++ L +S + +G V + + + ++ + S + Sbjct: 75 DRGALVGPPRTALDGAESDADSGRWLEVLVEADGAPSPVRLVSAYFHSGEKDTPKQEAKM 134 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--------------- 223 + + L + V+ GDFN + + Sbjct: 135 AHLPRIGARMAEL---LASAASGGEQAVVCGDFNVVRSRADIKNWTSNHNKRAGVLDEEI 191 Query: 224 -FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQE 273 F + +DY + Sbjct: 192 AFLNRWVEEGWHDVVRDLAGQVQGPYSWWTWRGQAFDNDAGWRLDYQFATPGLARAARS- 250 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISI 300 + S +R SDH P+ + Sbjct: 251 ------FTIGRAPSYDQRFSDHAPVGV 271 >gi|311743284|ref|ZP_07717091.1| exodeoxyribonuclease III [Aeromicrobium marinum DSM 15272] gi|311313352|gb|EFQ83262.1| exodeoxyribonuclease III [Aeromicrobium marinum DSM 15272] Length = 254 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 26/271 (9%), Positives = 63/271 (23%), Gaps = 41/271 (15%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 S + + + D D++ +QE + + + + Sbjct: 5 RSRIDRVVGFLERHDVDVLAIQETKCRED----------QFPGLELSALGYEYAHAGLNQ 54 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 +A+ + + R + + V +++ + L Sbjct: 55 WNGVAIVSRVGLDDVATTFADDQPTFADVLEPRS-----IGATCGGVRVWSLYVPNGREL 109 Query: 171 DSLENTYSPSCSLLSQQA--QWLKDWITQK---------KESLVPFVIAGDFNRKINYLG 219 D Y + ++A +WL + F + Sbjct: 110 DHDHYVYKLAWLDRLREAGQEWLAADPDAQIALTGDWNVAPQDEDVWDMAAFAGSTHVSE 169 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--------KIPIDYFVMDQNAYKFLI 271 ++ + + ID+ + + Sbjct: 170 PERAAFRAVVDAGYADVVRPHTPGPGVYTFWDYQQLRFPKREGMRIDFQLCSPALAARVE 229 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + D + +GK SDH P+ ID Sbjct: 230 KGWI-------DREERKGKGASDHAPVVIDL 253 >gi|296826702|ref|XP_002851020.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Arthroderma otae CBS 113480] gi|238838574|gb|EEQ28236.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Arthroderma otae CBS 113480] Length = 703 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 41/359 (11%), Positives = 90/359 (25%), Gaps = 77/359 (21%) Query: 22 QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 K ++++N + + + + LL + DADIV LQE+ + Sbjct: 319 DKFTVLTYNTLCDKYATHQQYGYAPSRALAWELRRDLLLSEIRGQDADIVCLQEVDQGSY 378 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL--- 131 + + + ++ S + K + + + Sbjct: 379 HGFFREQLAYNDYKGVYWPKGRAQGMSEEEAKVVDGCATFFKGSKYILLEKAMIHFGQTA 438 Query: 132 -------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 G D ++R + + ++V ++G++I V++ H+ ++ S Sbjct: 439 VRRPDAKGQDDIYNRLWQKDNIAVVVYLENRMSGERIIVVNAHIYWDPAYKDVKLVQSAI 498 Query: 181 CSLLSQQAQWLKDWITQKKESLV-----------------------------------PF 205 Q I + P Sbjct: 499 MMEEVTQLAEKFIKIPPCTDKTAFRFSEPEDETGNENTSPPTPVEPSPSVEYSSASQIPT 558 Query: 206 VIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRC----- 245 ++ GDFN + + N + + + F + Sbjct: 559 LVCGDFNSRPSSAVYNLLAHGRLEEDHPDLQNRLYGNLTRQGMTHPFTLKSAYSAIGELS 618 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY-NEDDIKSRGKRLSDHCPISIDYD 303 N IDY N + + Y SDH + ++ Sbjct: 619 FTNYTPGFTDVIDYIWYSSNLLQVTGLLGEVDKEYLQRVPGFPNYHFPSDHLALMAEFS 677 >gi|189500051|ref|YP_001959521.1| Endonuclease/exonuclease/phosphatase [Chlorobium phaeobacteroides BS1] gi|189495492|gb|ACE04040.1| Endonuclease/exonuclease/phosphatase [Chlorobium phaeobacteroides BS1] Length = 341 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 41/342 (11%), Positives = 86/342 (25%), Gaps = 59/342 (17%) Query: 3 RKYVLALVFFLVPCTA-----SVAQKVRLVSWNINTLSEQ-------EGVSLWKNSVKRT 50 R + L+ L + + K+ ++ WN+ L + + + + T Sbjct: 6 RLICITLLLSLTAVSPFNQALADNDKLTMMWWNVENLFDTVDDPLTRDSEFTPEGKKRWT 65 Query: 51 TSDY----TLLRQYAKNLD------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN 100 + K I+ E+ + N K+ + + N Sbjct: 66 EKKLLLKCMRISHIVKVAALKTGGYPGILAFAEVENLNVFKKLLSFLPDNSYKTAYHASN 125 Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 I A+A + +R+L+ L + + R + ++L Sbjct: 126 -----DPRGIDIALAYDAEKIRLLRT----LSYRVNLRERNTRDITLYSFTADNCPFFLL 176 Query: 161 DIHLKSFCFLDSLENT-YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 H S + + L+ + V+ GDFN Sbjct: 177 VNHWPSRSLDQAWSEPFRLQAAQTAKTIIDSLRK-----ISTDADIVVMGDFNDDPGDKS 231 Query: 220 NNDDFWKTIDPNDSL-----IRFPKEKDSRCNANKNLRNKIP-IDYFVMDQNAYKFLIQE 273 + T + + F SR + R++ D ++ + Sbjct: 232 IQEILHATTERDAFSRKSIGKLFNFWTKSREKGSCYFRSRWFQFDQVMVSSGLFDDRGLS 291 Query: 274 SFSE----------------ILYNEDDIKSRGKRLSDHCPIS 299 + Y SDH P+ Sbjct: 292 VPEDAFSCFHIRHMEKGSNRRPYATYKGPKYLGGYSDHFPLL 333 >gi|330972028|gb|EGH72094.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 233 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 77/256 (30%), Gaps = 41/256 (16%) Query: 54 YTLLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFY----STERLINHSKRDSN 107 LR+ + + ADIVFLQE+ + +V T + S + + Sbjct: 12 LPELREAVRTVSADIVFLQEVHGEQQSHARRVKDWPTISQYEFLADSMWNDFAYGRNAVY 71 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 D A+ K + ++ + S R + ++++ V I + Sbjct: 72 PDGDHGNALLSKYPIIQHENLDI-----SIHGTEQRGLLHCILDVPHAG-RVHAICVHLG 125 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 S QQ + L + + + P ++AGDFN + Sbjct: 126 LR-----------ESHRRQQLKLLNELMAR-IPEGEPVIVAGDFNDWRQRAD------AS 167 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + + F + + + + +D + S Sbjct: 168 LQGSGLHEVFVERFGAPAKSFPARWPLLCLDRIYVRNATSHRPKVLS-----------SR 216 Query: 288 RGKRLSDHCPISIDYD 303 LSDH P++++ Sbjct: 217 PWSHLSDHAPLAVELT 232 >gi|323343527|ref|ZP_08083754.1| AP endonuclease domain protein [Prevotella oralis ATCC 33269] gi|323095346|gb|EFZ37920.1| AP endonuclease domain protein [Prevotella oralis ATCC 33269] Length = 361 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 85/304 (27%), Gaps = 71/304 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++++S+N+ S + ++ Q+ +ADIV LQE + Sbjct: 97 PNAIKVLSYNVWMFSGWDETGKNNPTL-----------QFIAEQNADIVCLQEAEGWGIY 145 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++ + D +A+ K + ++ + + Sbjct: 146 KAKADSVMNGLYQYADTSRRKDGGDV-------LAIYSKYPIIKKERIVYPSKTNHSA-- 196 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL------------------------ENT 176 ++ING + V++ H +S + Sbjct: 197 ------AFYLKINGDTVIVINNHFESIGLSPEDKTNFKEMVKGDMNAKCVEKESKKLIDK 250 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + + + Q + +I + K + ++ GDFN K++ Sbjct: 251 LAEASKRRAPQVDAVAQYIYEHKR--MSMILCGDFNDGP-LSYTRRIMAKSLTD-----C 302 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + + + + + ID + + + + SDH Sbjct: 303 YVESGNGIGISYHHGGFYVRIDNIMCSND----WVPYGCKVDNRV---------KSSDHY 349 Query: 297 PISI 300 PI Sbjct: 350 PIYC 353 >gi|299144762|ref|ZP_07037830.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] gi|298515253|gb|EFI39134.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] Length = 336 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 87/305 (28%), Gaps = 67/305 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++++S+N+ + + E + Y + +ADI+ LQE + Sbjct: 74 GSIKILSYNVMSFNNLEKKDGKNP-----------VLSYLVDSNADIICLQEYNTATNKK 122 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + ++ + H + +A K + + + Sbjct: 123 YLTEQDIKKALKAYPYQSVHQQG----KGDVQLACFSKFPILSIHPIEYESNYNGSMKY- 177 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------- 178 ++ +N + +++ HL+S Y Sbjct: 178 -------VLNVNNDTLTLINNHLESNKLTKEDRGMYEDMIKDPNAKKVKTGLRQLIRKLA 230 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + ++ + QA + I + K ++ GDFN + + + +D F Sbjct: 231 EASAIRATQADSVAKTIAESKYPTT--IVCGDFNDG-SISYTHRILTQKLDD-----AFT 282 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + ID ++ N + + R + SDH PI Sbjct: 283 QSGKGLGISYNQNKFYFRIDNILISPNLKAY-------------NCTVDRSIKASDHYPI 329 Query: 299 SIDYD 303 Sbjct: 330 WCYIS 334 >gi|73542888|ref|YP_297408.1| endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134] gi|72120301|gb|AAZ62564.1| Endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134] Length = 259 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 33/291 (11%), Positives = 74/291 (25%), Gaps = 61/291 (20%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 A+ ++ + S+NI+ +G + + + + L AD+V LQE+ Sbjct: 18 APLAARHAEIAVASYNIHGGVGTDGHFVP-----------KRICEVLRELRADLVALQEV 66 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + +D A+ + + + L Sbjct: 67 ETRATGFDMLGFLSRHTGLHAIPGPT----LVRDDGDYGNALLTRYAPLRVRHIDLSVKG 122 Query: 135 DSFSRAGNRRAVELL-----VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 R A++ +E + V+ HL Q + Sbjct: 123 -----REPRGAIDAQLQCDAIEAGTFALRVIATHLGLLPS-------------ERRAQVR 164 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L + + P ++ GD N + + + Sbjct: 165 RLLTALAEVPA--QPTILLGDVNEWFLWGRPLRWLHAYFER-----------TPHVSTFP 211 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + +D A ++ + SDH P+ Sbjct: 212 SRCPVLALDRIWTSPRA----------HLVAVSSHRSPVARLASDHLPLLA 252 >gi|326573473|gb|EGE23441.1| catabolite repression control protein [Moraxella catarrhalis 101P30B1] Length = 336 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 87/310 (28%), Gaps = 69/310 (22%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-S 76 + Q +R+VS N+N L E + ++ +AD+V +QE + Sbjct: 69 QTANQVLRVVSINVNGLRAAEKKGFF---------------EWLAVSNADVVCIQESRIT 113 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + F W + ++ +A+ + V DS Sbjct: 114 HEQWTDKFRPKGWHTHLFAAQKAGYA----------GVAIYSRLPFVSVVDGLGFDLADS 163 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R +L + +++ ++L S + + + + + + Sbjct: 164 QGR-FICAQFDLSAQGIDHPVYIASLYLPSGSSGE-------EAQARKDLFLEKYRHILK 215 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEK 241 Q ++ ++ GD+N + + + I + + Sbjct: 216 QWRDENKSLIVCGDYNIVHKRIDIKNWSGNQKASGCLPHERAWLDHIYDELGYVDTFRVV 275 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + N+ IDY + K + + Sbjct: 276 RKDADIYSWWSNRGQARAKNVGWRIDYHACSPDWKKRTLNAWV-----------YKDSWF 324 Query: 293 SDHCPISIDY 302 SDH P+ IDY Sbjct: 325 SDHAPVIIDY 334 >gi|59802302|ref|YP_209014.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae FA 1090] gi|194099736|ref|YP_002002871.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae NCCP11945] gi|240013129|ref|ZP_04720042.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae DGI18] gi|240015572|ref|ZP_04722112.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae FA6140] gi|240120200|ref|ZP_04733162.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae PID24-1] gi|254492721|ref|ZP_05105892.1| nuclease [Neisseria gonorrhoeae 1291] gi|59719197|gb|AAW90602.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae FA 1090] gi|193935026|gb|ACF30850.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae NCCP11945] gi|226511761|gb|EEH61106.1| nuclease [Neisseria gonorrhoeae 1291] Length = 259 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 79/305 (25%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S N+N + + +Y ADIV +QE+ + A Sbjct: 2 LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEA-DLS 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ +AV K +G R Sbjct: 46 ADMKNPHGMHGYWHCA-------EKRGYSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + ++ V+ ++L S + + + + + K Sbjct: 95 F-----VRCDFGRLGVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNEGR 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248 V+ GD+N + + + + Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHTLGWTDMWRTLYPDVPGY 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY ++ + + ++ SDH P+ Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 251 Query: 300 IDYDF 304 ++YD+ Sbjct: 252 VEYDY 256 >gi|294782305|ref|ZP_06747631.1| endonuclease/exonuclease/phosphatase family protein [Fusobacterium sp. 1_1_41FAA] gi|294480946|gb|EFG28721.1| endonuclease/exonuclease/phosphatase family protein [Fusobacterium sp. 1_1_41FAA] Length = 286 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 94/308 (30%), Gaps = 39/308 (12%) Query: 1 MIRKYVLA----LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 + +K L L+ F + T S A + + S+NI L D Sbjct: 7 LKKKLSLFIASVLMIFTMFSTISSADEAYIASFNILRLGA-------------AEKDMVQ 53 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIA 115 + + D+V L E+ + + ++ + + E I+ S+ + Sbjct: 54 TAKLLQGF--DLVGLVEVINKKGIEELVDELNRQSPNTWEYHISPFGVGSSKYKEYFGYV 111 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 +K V+ ++ K S R +I ++ +H Sbjct: 112 YKKDKVKFIKSEGFYKDGKSSL----LREPYGATFKIGNFDFTLVLVHTIYG-------- 159 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 + + + D+ K + +IAGDFN + +K D I Sbjct: 160 NNESQRKAENFKMVDVYDYFQDKDKKENDILIAGDFNL-YALDESFRPMYKHRDKITYAI 218 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + N D F Q S + ++E D + + +SDH Sbjct: 219 DPAIKTTIGTKGRANSY-----DNFFFSQKYTTEFTGSS-GALDFSEKDPQLMRQIISDH 272 Query: 296 CPISIDYD 303 P+ I + Sbjct: 273 IPVFIVVE 280 >gi|311740203|ref|ZP_07714035.1| extracellular nuclease [Corynebacterium pseudogenitalium ATCC 33035] gi|311304758|gb|EFQ80829.1| extracellular nuclease [Corynebacterium pseudogenitalium ATCC 33035] Length = 924 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 40/340 (11%), Positives = 93/340 (27%), Gaps = 68/340 (20%) Query: 22 QKVRLVSWNINTLSE---------------------QEGVSLWKNSVKRTTSDYTLLRQY 60 + + ++N+ G + + + Sbjct: 489 GEYTIGAFNVLNYFTSLGEEFGGSAYTDREGNKVTVNRGKTRGAYTQSALEDQERKIVAA 548 Query: 61 AKNLDADIVFLQEMGS------------------YNAVAKVFPKNTWCIFYSTERLINHS 102 LDAD++ L E+ + + + W S + Sbjct: 549 INGLDADVIGLSEIEDGYAVTGNFAQRDKALKHLTEKLNEAAGSDKWAFVPSPSQDAVPD 608 Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 S + I TA K V+ + +S + + + ++ + + Sbjct: 609 ---SPDVIRTAFIYHKDVVKPVGESRIFQDDRFTGTAREPLAQEFQPLKEGEESFVAVAN 665 Query: 163 HLKSFC----FLDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINY 217 H KS + + ++ + QAQ + D + ++++ P GDFN + Sbjct: 666 HFKSKGSVAKGDADSGDGQGNNPNVRNAQAQAVLDALHKQEDWKDKPLFALGDFNTYTHE 725 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 + + K + + + +D+ + ++ A L Sbjct: 726 T-----ALDVFRNDGFTVPAEKYEADP--SYQFSGLLGTLDHVLANKVATGTLDDAQVWN 778 Query: 278 ILYNEDDIKSRGKR--------------LSDHCPISIDYD 303 I +E +R SDH P+ + + Sbjct: 779 INADEPVAFEYSRRNYNIVDFYDDSPFRASDHDPVKVGFT 818 >gi|107101580|ref|ZP_01365498.1| hypothetical protein PaerPA_01002624 [Pseudomonas aeruginosa PACS2] gi|116050099|ref|YP_791087.1| hypothetical protein PA14_36680 [Pseudomonas aeruginosa UCBPP-PA14] gi|218891892|ref|YP_002440759.1| putative metal-dependent hydrolase [Pseudomonas aeruginosa LESB58] gi|254235182|ref|ZP_04928505.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|254240584|ref|ZP_04933906.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|296389425|ref|ZP_06878900.1| putative metal-dependent hydrolase [Pseudomonas aeruginosa PAb1] gi|115585320|gb|ABJ11335.1| putative metal-dependent hydrolase [Pseudomonas aeruginosa UCBPP-PA14] gi|126167113|gb|EAZ52624.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126193962|gb|EAZ58025.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|218772118|emb|CAW27897.1| putative metal-dependent hydrolase [Pseudomonas aeruginosa LESB58] Length = 245 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 86/256 (33%), Gaps = 43/256 (16%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVF-----PKNTWCIFY-STERLINHSKRDSN 107 LR+ +++ AD+VFLQE+ +++ P + S + + Sbjct: 26 LPELREAVRSVGADLVFLQEVLGSHSLHAARLPSWPPAPQYEYLADSMWPQFAYGRNAVY 85 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 + H AV K+ + ++ + A + R + +++I G+ + + +HL Sbjct: 86 PEGHHGNAVLSKHPILAHRNLDVSVAGN-----EERGLLHAVIDI-GRPLHAVCVHLGLR 139 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 + +Q Q L + + P V+AGDFN + Sbjct: 140 -------------EAQRQRQLQLLCELVAG-LPEREPVVVAGDFNDWRQRAD------QL 179 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + F + + +P+D + + S + Sbjct: 180 LAGCGLREVFVGAQGRPARSFPARWPVLPLDRIYLRNARGRQPRILS-----------RR 228 Query: 288 RGKRLSDHCPISIDYD 303 LSDH P++++ + Sbjct: 229 PWSHLSDHLPLAVEVE 244 >gi|315037291|ref|YP_004030859.1| Exodeoxyribonuclease III [Lactobacillus amylovorus GRL 1112] gi|325955769|ref|YP_004286379.1| Exodeoxyribonuclease III [Lactobacillus acidophilus 30SC] gi|312275424|gb|ADQ58064.1| Exodeoxyribonuclease III [Lactobacillus amylovorus GRL 1112] gi|325332334|gb|ADZ06242.1| Exodeoxyribonuclease III [Lactobacillus acidophilus 30SC] gi|327182596|gb|AEA31043.1| Exodeoxyribonuclease III [Lactobacillus amylovorus GRL 1118] Length = 275 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 82/303 (27%), Gaps = 56/303 (18%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L+SWNI++L+ + + R + + + DI+ +QE Sbjct: 3 LISWNIDSLNAALTGTSARAEETR------QVLDKIHDANPDIIAIQETKLRATGPTKKH 56 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + + S + + K + SYP +G D+ G Sbjct: 57 QTVLAEKFPEYDYVWRSSEEPARKGYAGTMYLYKKELTPKASYPTIGVPDTMDAEGR--- 113 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++ ++ K +V ++ + ++ L P Sbjct: 114 ---IITLDFDKFFVTQVYTPNSGSGLKRLADRQVWDEKYTEYLHKLDQ--------EKPV 162 Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + +GD+N + + F K + Sbjct: 163 LASGDYNCAHTEIDLKHPENNHHSAGFTDEERVDFTNLLNAGFTDTFRKVHGDITDVYSW 222 Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY+++ +++ + DHCPI + Sbjct: 223 WAQRVRTAKANNSGWRIDYWLVSNRIADKVVRSEMMDTGKRA-----------DHCPILL 271 Query: 301 DYD 303 + + Sbjct: 272 EIN 274 >gi|306842863|ref|ZP_07475501.1| exodeoxyribonuclease III (xth) [Brucella sp. BO2] gi|306286985|gb|EFM58500.1| exodeoxyribonuclease III (xth) [Brucella sp. BO2] Length = 252 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 30/275 (10%), Positives = 72/275 (26%), Gaps = 56/275 (20%) Query: 57 LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 + Q+ ++ D++ LQE AK F + S + + Sbjct: 4 VEQFLRDYQPDVLCLQETKCPDDQFPAKGFRALGYEHIA-----------ISGQKGYHGV 52 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 A + + D + +VE +K+ + + ++ + D + Sbjct: 53 ATVSRRPLGGVEKVDFCNMGDCRH-------LSAVVEAGDRKLRIHNFYVPAG--GDEPD 103 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI--NYLGNNDDFWKTID--- 229 +P + + ++ I +K+ ++ GD N N + ++ K + Sbjct: 104 PAINPKFAHKLAFLEEMRAIIADRKDECSSLLV-GDLNIAPLENDVWSHKQLLKIVSHTP 162 Query: 230 -----------PNDSLIRFPKEKDSRCNANKNLRNKI----------PIDYFVMDQNAYK 268 + + +D+ + Sbjct: 163 IETETLEDLRIKGGWSDLMRHLIAADQKIYTWWSYRAKDWDAADRGRRLDHVWGSADLES 222 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + R SDH P+ +D Sbjct: 223 HIKG-------LQVLRDARGWDRPSDHVPVIATFD 250 >gi|283779701|ref|YP_003370456.1| endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068] gi|283438154|gb|ADB16596.1| Endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068] Length = 336 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 39/324 (12%), Positives = 97/324 (29%), Gaps = 55/324 (16%) Query: 21 AQKVRLVSWNINTL-SEQEGVSLWKNSVKR-------TTSDYTLLRQYAKNLDADIVFLQ 72 +K+ + +WN+ E G + K ++ + + ++ I+ LQ Sbjct: 24 PEKLVVATWNLEWFYDEHIGDNYMKLPKEQAAPTRADWDWKLNGIAKAIATINPTIIALQ 83 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ + + + K + R+ D + AI + + Sbjct: 84 EIENRRVLFYLTSKLKKDHNLT-YRVAFIEGSDYFTEQDVAILYQSGLTSFSWKEQTKEE 142 Query: 133 AKDSFSRAGNRRAVELLVEING----KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 N+ + E +K+ +L++HL++ + + ++Q Sbjct: 143 FAVQDYYHLNKH-LFAEFEWGPPEDREKLSILNLHLRAAP----------DAADIRTRQG 191 Query: 189 QWLKDWITQKKESLVPFVIAGDFN--------RKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + + W+ K + +I GD N + +G +D Sbjct: 192 RLARKWMNDKILAGENVIIMGDLNTNDLWNNLAPDSDIGVIRGLDTPSTDDDLFDTLSAV 251 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNA------------------YKFLIQESFSEILYNE 282 K+ + + D ++ + ++ + + E Sbjct: 252 KEENPYTHLIFKQ---FDRILLSPSLTKDAPGKKDLVFKSATIRRDLVVNGKEQDTEHRE 308 Query: 283 DDIK--SRGKRLSDHCPISIDYDF 304 K + SDH P+ +++F Sbjct: 309 IYWKIAEAERDFSDHYPLVTEFEF 332 >gi|41409338|ref|NP_962174.1| hypothetical protein MAP3240 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398158|gb|AAS05788.1| hypothetical protein MAP_3240 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 260 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 37/308 (12%), Positives = 72/308 (23%), Gaps = 82/308 (26%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--- 78 + +R+ ++NI + LR + LD D++ LQE+ Sbjct: 5 KAMRVATFNILHGRTVCDG-----------VNVERLRDCIRRLDPDVLSLQEVDCDQPRS 53 Query: 79 -------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-----TAIAVRKKNVRVLQQ 126 A A+ + + + D IA+ + Q Sbjct: 54 EHADLTGAAAEAMGAVEHRFVAAISGTPGATWMAATGDEQPGTAAYGIALLSRYPVASWQ 113 Query: 127 SYPLLGAKDSFS------------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 L F R AV + ++ V + HL + Sbjct: 114 VLRLPRIPMRFPMYLPGPNRVMIVDEEPRAAVIAQLRTPIGELTVANTHLSFVPGWNR-- 171 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + L+ I + P ++ GD N + Sbjct: 172 --------------RQLRRLIRDLRGLPGPRLLTGDLNMTPQTVRRWSGMRAL------- 210 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 +D+ + + + +SD Sbjct: 211 --------GNAKTFPADNPNRQLDHIL-TDDRRLRCAAVQADLMP------------ISD 249 Query: 295 HCPISIDY 302 H P+ +D Sbjct: 250 HRPLVVDL 257 >gi|323344424|ref|ZP_08084649.1| exodeoxyribonuclease III [Prevotella oralis ATCC 33269] gi|323094551|gb|EFZ37127.1| exodeoxyribonuclease III [Prevotella oralis ATCC 33269] Length = 249 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 39/302 (12%), Positives = 82/302 (27%), Gaps = 77/302 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L G + K+LDAD LQE A Sbjct: 1 MKLISWNVNGLRACVGKDFETS---------------FKSLDADFFCLQETK-MQAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 N + +++ ++ ++ A+ K + + D R Sbjct: 45 LAFNGYQSYWN----------YADKKGYSGTAIFTKQTPLNVTYGMGIDEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + L ++ Sbjct: 91 -----VITLETENFFLVTVYTPNSQDELRRLEYRMRWEDDFKAYLLAL--------DARK 137 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249 P ++ GD N + + + I + Sbjct: 138 PVIVCGDMNVAHEEIDIKNPKTNRRNAGFTDEEREKMTELLAGGFIDTFRTLYPEQVTYS 197 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF++ + + + +Y SDHCPI + Sbjct: 198 WWSYRFRARERNTGWRIDYFLISERLKERIADAKIHTDIY-----------GSDHCPIEL 246 Query: 301 DY 302 D Sbjct: 247 DL 248 >gi|255011457|ref|ZP_05283583.1| hypothetical protein Bfra3_20100 [Bacteroides fragilis 3_1_12] gi|313149275|ref|ZP_07811468.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313138042|gb|EFR55402.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 365 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 88/308 (28%), Gaps = 64/308 (20%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + ++L+S+NI + + + + Y KN ADIV +QE Sbjct: 93 PSGQPENSIKLLSYNIMSFGNMKKENGQNP-----------ILNYIKNSKADIVCMQEYA 141 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 H K+ + IA K + + + Sbjct: 142 GSETAKIHLNNKEIRQALKDYPYR-HIKQVGKTGAGSQIACYSKFPILSARMLDYQSNYN 200 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKS-----------------------FCFLDS 172 ++ ++I + +++ HL+S + Sbjct: 201 --------GSMVYDIKIGKDTVLLINNHLESNKLTREDKVVYEDMLKDPKAGKVKSGIRQ 252 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 L N + + ++ S QA+ + I + ++ GDFN + + +D Sbjct: 253 LVNKLAEASAIRSAQARAIAQEIARSPYPS--VIVCGDFNDSPISYA-HRVISQDLDD-- 307 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 F + + + ID ++ +N + +D Sbjct: 308 ---AFTESGRGLGISYNQNKFYFRIDNILISKNL----KASGCTVDNSIKD--------- 351 Query: 293 SDHCPISI 300 SDH PI Sbjct: 352 SDHYPIWC 359 >gi|163796022|ref|ZP_02189985.1| Endonuclease/exonuclease/phosphatase [alpha proteobacterium BAL199] gi|159178777|gb|EDP63315.1| Endonuclease/exonuclease/phosphatase [alpha proteobacterium BAL199] Length = 248 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 41/282 (14%), Positives = 79/282 (28%), Gaps = 56/282 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAVAK 82 +R+ S+NI K+ + LDAD+V LQE+ A A Sbjct: 2 LRVASYNI-----------CKSVGTDLRRRPDRVLAVLGELDADVVALQEVDRRFGARAS 50 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 V ++ S + + + DS A+ + + + + L Sbjct: 51 VLSPDSIVAETSFKPVRFGVRPDSLGWHGNALLIGRDVEVLSHRRLELPS-------FEP 103 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R A+ + + G I V L +QA+ + + E Sbjct: 104 RGAILADLRVRGTAIRV-------------LGMHLGLLGLWRRRQARAVLMTLEA-LEEP 149 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-RCNANKNLRNKIPIDYFV 261 +P V+ GD N + + + + + R +D + Sbjct: 150 LPTVMMGDLNEWT------------LGGGCLAMFAKHHHVAVPGQSFHSRRPIATLDRII 197 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ++ + SDH P+ Sbjct: 198 TS--LDLRVEDAGVHV--------SAKSRVASDHLPVWASIT 229 >gi|330874571|gb|EGH08720.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 291 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 38/292 (13%), Positives = 81/292 (27%), Gaps = 58/292 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 ++RL+S+NI E + + + + D D+V L Sbjct: 30 PEDGRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHVGRAGNLQKIGDLIN--DFDLVAL 87 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE+ + + + R+ + V + + +PL Sbjct: 88 QEVDGGSMRSGFVNQVEHLAQLGGFPFWYQQLNRNLGRFAQHSNGVLSRLRPTRIEDHPL 147 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G R A+ + + V+ +HL ++Q + Sbjct: 148 PGPAG-------RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQLAY 187 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 +++ I V+ GD N N L + + + Sbjct: 188 IRELIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 233 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + +D+ ++ +Q I SDH P++++ Sbjct: 234 WRPQRCLDHILLSPTLTLERVQVLAHPI--------------SDHLPVAVEI 271 >gi|125542548|gb|EAY88687.1| hypothetical protein OsI_10162 [Oryza sativa Indica Group] Length = 607 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 43/346 (12%), Positives = 85/346 (24%), Gaps = 65/346 (18%) Query: 22 QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-- 77 ++S+NI +T + + S L + ADI+ LQE+ S Sbjct: 254 GTFTVLSYNILADTYATSDTYSYCPTWALSWPYRRQNLLREIIGYHADIICLQEVQSNHF 313 Query: 78 -NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL----LG 132 A K+ + + ++ + D R K V + Sbjct: 314 EEFFAPELDKHGYQALFKKRTTEVYTGNLQSIDGCATFFRRDKFSHVKKYEVEFNKAAQS 373 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLD------------IHLKSFCFLDSLENTYSPS 180 D+ A R+ + + + + + C ++ N + Sbjct: 374 LTDAIIPAAQRKVALTRLIKDNIALIAVLEAKFGSHGADNPSKRQLLCVANTHINVHQDL 433 Query: 181 CSLLSQQAQWLKDWITQKK-ESLVPFVIAGDFNRKINYLGNN------------------ 221 + Q L + + + +P ++ GDFN + Sbjct: 434 KDVKLWQVNTLLKGLEKIAVSADIPMLVCGDFNATPGSTPHGLLAMGKVDLMHPDLAIDP 493 Query: 222 ------------------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 D R + N I Sbjct: 494 LGILRPASKLTHQLPLVSAYSSFARMVGAGYDLEHQRRRMDPATNEPLFTNCTRDFTGTI 553 Query: 258 DYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 DY + + E E +D + SDH + ++ Sbjct: 554 DYIFYTADSLSVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEF 599 >gi|71905765|ref|YP_283352.1| AP endonuclease [Dechloromonas aromatica RCB] gi|71845386|gb|AAZ44882.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Dechloromonas aromatica RCB] Length = 259 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 89/309 (28%), Gaps = 80/309 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81 +R++S N+N + ++ + +AD++ LQE+ + + Sbjct: 2 LRIISLNLNGIRSAWSKNVLP---------------WVAAQNADVICLQELKAQLPDLTP 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + FY +S I R+K RV++ G A Sbjct: 47 EMMAPDGMQAFYHCAEKKGYSG--------VGIWSREKPDRVIE------GFDGGEFDAE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + + V+ ++L S + + Q L+ Sbjct: 93 GRY-----IRADFGNLSVISLYLPSGSSSPERQEAKFRFLDVFFPQMLALRA-------E 140 Query: 202 LVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 V+ GD+N + + + + + Sbjct: 141 GREIVLCGDWNIAHQAIDLKNWKSNQKNSGFLPEERAWLSRLFEEQGWVDVYRRLHPETT 200 Query: 246 NA-NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 +A N+ IDY + +Q + +R SDH Sbjct: 201 DACYTWWSNRGQAWAKNVGWRIDYQIATPGIAVMAVQAEV-----------YKDERFSDH 249 Query: 296 CPISIDYDF 304 P+ IDYDF Sbjct: 250 APLIIDYDF 258 >gi|332670340|ref|YP_004453348.1| endonuclease/exonuclease/phosphatase [Cellulomonas fimi ATCC 484] gi|332339378|gb|AEE45961.1| Endonuclease/exonuclease/phosphatase [Cellulomonas fimi ATCC 484] Length = 255 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 77/305 (25%), Gaps = 80/305 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78 +RL ++NI D + LDAD++ LQE+ Sbjct: 1 MRLATFNILHGRSTVDG----------EVDLDRFGAAVRALDADVLALQEVDRDQPRSHG 50 Query: 79 -----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDI----HTAIAVRKKNVRVLQQSYP 129 A + + IA+ ++ + Sbjct: 51 ADLTVVAADAMGAPHHRFVAVLHGEPGLWTAATGDHQPATASYGIALLSRHPVREWRVLT 110 Query: 130 LLGAKDSFS------------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 L + R R A+ +VE + V+ HL + Sbjct: 111 LPTLRRRTPVRWPGQRWPTLVRDEPRAALAAVVEGPSGTLTVVATHLTFIPGWN------ 164 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + L+ ++Q + P V+ GD N ++ Sbjct: 165 ----------VRQLRHLVSQVRPLPRPLVLTGDLN---------------LEAERPQRVT 199 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + + +D+ + D + + ++ LSDH Sbjct: 200 GMRPLATADTYPVAQPVKQLDHVLADGP-------------VRADGRGRAVDTGLSDHRA 246 Query: 298 ISIDY 302 + +D Sbjct: 247 LVVDL 251 >gi|313159826|gb|EFR59182.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 326 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 44/329 (13%), Positives = 87/329 (26%), Gaps = 49/329 (14%) Query: 7 LALVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 L ++ C + +RL+ WNI +YT + Sbjct: 13 LFILTLFPGCAQRQTDEANLRLLYWNIQNGMWSGQG-----------DNYTRFVNWVSAQ 61 Query: 65 DADIVFLQEMGSY---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + D+ E + + K+ P+ + + E + H R Sbjct: 62 NPDVCVWCESVTNYKTASDEKIKPEEAYLPEHWGELARRYGHEYWYKGGH-----RDNFP 116 Query: 122 RVLQQSYPLLGAKDSFSRAG----NRRAVELLVEINGKKIWVL--DIHLKSFCFLDSLEN 175 +V+ YP+ + A + NG + ++ + + F + + Sbjct: 117 QVITSKYPIENVARLIGAVPDSIVSHGAGWAQIRKNGHTVNIVSLHTWPQVYGFGLADKL 176 Query: 176 TY------SPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDF--- 224 + +++ + +++ GDFN K F Sbjct: 177 ERKASAAAREGDRFRRMEIEYVCNHTIGSVAGAEKQLWMMMGDFNSKSRVDNYEYGFPED 236 Query: 225 ------WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 I + + K + IDY + Y ++ Sbjct: 237 TTAFLVHDYICQHTPYVDVIAAKYPGEFQTTT-GRRFRIDYVYCTRPLYDRIVSARVVSD 295 Query: 279 LYNEDDI----KSRGKRLSDHCPISIDYD 303 Y SDH PI ID+D Sbjct: 296 EYTTPVRDPQELRNFWHPSDHRPIIIDFD 324 >gi|228918521|ref|ZP_04081964.1| hypothetical protein bthur0012_56580 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228841137|gb|EEM86336.1| hypothetical protein bthur0012_56580 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 342 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 45/338 (13%), Positives = 96/338 (28%), Gaps = 56/338 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 ++R ++N+ E NS +++ ++ D++ QE+ S NA Sbjct: 2 QIRFGTFNLYQFVEPPYKWYEPNSFYSDADWLKKKEWIKKQILDMKCDVIGFQEVFSTNA 61 Query: 80 VAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD--- 135 + + + + F + + + ++ AIA + + V P ++ Sbjct: 62 LKNLVEEVGFTHFTTVESPVTDINEPLVFIKPVVAIASKYPILSVSPVEIPDSIIEEVLL 121 Query: 136 SFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSF-------CFLDSLENTYS--------- 178 + +R ++ + I+ + + HLKS F S Sbjct: 122 GKTFKFSRIPIKAKIRIDSSRDVICYVSHLKSKKPAVKDIVFNPSETWDKQILENLRARS 181 Query: 179 ----PSCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNNDDF-------- 224 S +A L I++ + P ++ GD N + + Sbjct: 182 MGHVASLLQRGTEAAILYREISETLHNHKEFPIILLGDLNDDEHSIPIEALTNREKLLKI 241 Query: 225 ---------WKTIDPNDSLIRFP----KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 K I F + R + + +D+ + + Sbjct: 242 GDKIIPEEEQKIIYDYKLYDAFDLAPNQSGQKRLPTHYYGKLGNVLDFIFVSNALNEKNE 301 Query: 272 QESFSEILYNEDDIK-----SRGKRLSDHCPISIDYDF 304 + Y D K SDH + F Sbjct: 302 EYIGRVSEYKVFDRHLKCDDIENKTQSDHAQVVATIKF 339 >gi|317124663|ref|YP_004098775.1| endonuclease/exonuclease/phosphatase [Intrasporangium calvum DSM 43043] gi|315588751|gb|ADU48048.1| Endonuclease/exonuclease/phosphatase [Intrasporangium calvum DSM 43043] Length = 805 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 89/344 (25%), Gaps = 61/344 (17%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWK------------------NSVKRTTSDYTLL 57 V ++R+ N+ + + Sbjct: 456 AVPEVGGRIRVAGMNVLNYFNTWDGRPDRVNNCTGGVGGASMDCRGADDAFEFERQAAKT 515 Query: 58 RQYAKNLDADIVFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKR------DS 106 + +DA +V + E+ + +A+A + + T ++ +R Sbjct: 516 VEAILGMDAAVVGVIEIENDGYGPDSALADLVNRLNAEAGAGTWAYVDVDERTAQLNALG 575 Query: 107 NNDIHTAIAVRKKNVR-----VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 + I ++ V + + + DS R A + + G + Sbjct: 576 TDAIKVGAIYQRDLVVPMGDTAVLNTEAFVTGGDSEERNRPALAQAFVEKSTGGSFVAVV 635 Query: 162 IHLKSF---CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKIN 216 HLKS C + + + + A L DW+ S +I GD N Sbjct: 636 NHLKSKGSACDSPAENDGQGNCNDVRVRAAGLLTDWLAADPTGTSEKDVLILGDLNSYAM 695 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 T+ K + +D+ + + + + Sbjct: 696 EDPI-----TTLREAGYTNLVRKYGGEAAYSYVFDGQWGYLDHALATASLAPQVTGVAEW 750 Query: 277 EILYNEDDIKSRG-----------------KRLSDHCPISIDYD 303 + +E + R SDH P+ + D Sbjct: 751 HVNADEPSVLDYNTDFKSAAQIGYLYAPDQFRNSDHDPVVVGLD 794 >gi|198276076|ref|ZP_03208607.1| hypothetical protein BACPLE_02261 [Bacteroides plebeius DSM 17135] gi|198270888|gb|EDY95158.1| hypothetical protein BACPLE_02261 [Bacteroides plebeius DSM 17135] Length = 349 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 36/352 (10%), Positives = 86/352 (24%), Gaps = 60/352 (17%) Query: 1 MIRKYVLALVFFLVPCTAS--VAQKVRL---VSWNINTLSEQEGVSLWKN---------- 45 M ++ ++ +F T S ++ + +N+ L + K Sbjct: 4 MNKRLLIFTLFITCIYTTSLFAQDRLGVYAAAFYNLENLWDTVDDPNNKGDDDFTPEGQY 63 Query: 46 --SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTE 96 + + + + L D I+ + E+ + + + Sbjct: 64 EWTQTKYEQKLQNIAKVISQLGRDYCPAGPAIIGISEVENRKVLEDLTKTAP---ISGMG 120 Query: 97 RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK 156 I H + + I A K +++ D R + + + G+ Sbjct: 121 YEIVHFESPDHRGIDVAALYNPKLFKLIDARTYPFNKPD-MPNYKTRDILLVSGILAGEP 179 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216 ++ H S + + S++ + + +I GD N Sbjct: 180 FHLIVNHWPSRYGGSASSPLREFAASIVKHIGDSIHA-----QNPEAKVLIVGDLNDDPF 234 Query: 217 YLGNNDDFW-----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF-- 269 ++ K + P+ K D + D ++ N Sbjct: 235 NKSCSEVLGAKKNIKEVKPDGYYNATWKLYDQGIGSLCYQNQWNLFDQQIISGNLIGKDR 294 Query: 270 -----------------LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + SDH P + Sbjct: 295 STLKFWKSEVFNRPFLLQKEGKYKGYPLRTFSGTTFQNGFSDHLP---TLTY 343 >gi|90580850|ref|ZP_01236652.1| hypothetical extracellular nuclease [Vibrio angustum S14] gi|90437921|gb|EAS63110.1| hypothetical extracellular nuclease [Vibrio angustum S14] Length = 777 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 47/383 (12%), Positives = 98/383 (25%), Gaps = 105/383 (27%) Query: 24 VRLVSWNINTLSE---QEGVSLWKNSVKRTTSDYTL------------------LRQYAK 62 +++ S+N+ G SL + +D + Sbjct: 298 LKVASFNVLNFFTSHSDIGGSLNPTCKDQADADAAKGCNRGAKTAAEFELQRTKIVNALT 357 Query: 63 NLDADIVFLQEMGSY-----NAVAKVFPK---------NTWCIFYSTERLINHSKRDSNN 108 +DADI+ + EM + +A+ + + + + ++ N + ++ Sbjct: 358 AMDADIIGIMEMENNGFGKNSAIQNLVDELNLHFNDSSDHYQFVEINDKDKNKGQFFGSD 417 Query: 109 DIHTAIAVRKKN--VRVLQQSYPLLGAKDSFSRAG---------NRRAVELLVEINGKK- 156 I A+ R Q + S + A R + ING K Sbjct: 418 AIMVAMLYRPSKVTPIKDAQVIRMPSQHMSATNAKGESVKIDAYQRDTLLQQFAINGAKK 477 Query: 157 ---IWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQ----------AQWLKDWITQKKESL 202 + ++ HLKS + + Q A L D + Sbjct: 478 KSQLTIVVNHLKSKGSGCYEDWLNEQKDKNYQNIQGNCNDFRVSAAMVLADKLKTMSGD- 536 Query: 203 VPFVIAGDFNRKINYLGNN---------------DDFWKTIDPN-------------DSL 234 ++ GD N I + Sbjct: 537 --VLVMGDMNAYGMEDPIRVLTQYKPKQYQRKIMSASGTFIGDQSLHPEGIAASKGLGLV 594 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291 K + + +D+ + ++ K + I E+ + + Sbjct: 595 NLATKWHGADSYSYSYDGELGSLDHALASRSLLKKVRGIEDWHINSVENSLFEYSSKYSG 654 Query: 292 ----------LSDHCPISIDYDF 304 SDH P+ I++ + Sbjct: 655 DLVKSTGPYSASDHDPVIINFAY 677 >gi|223278420|ref|NP_001138591.1| DNA-(apurinic or apyrimidinic site) lyase [Canis lupus familiaris] Length = 318 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 74/311 (23%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + + +++ SWN++ L + K DI+ LQE Sbjct: 53 TAPSGKSATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K + + S+ + ++ + + + + G Sbjct: 98 KCSE------NKLPAELQELPGLPHQYWSAPSDKEGYSGVGLLSRQCPLKVS----YGIG 147 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R V ++ ++ + + + L Sbjct: 148 EEEHDQEGRVIVA-----EFDTFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ + L Sbjct: 255 HLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 306 --GSDHCPITL 314 >gi|23465951|ref|NP_696554.1| exodeoxyribonuclease [Bifidobacterium longum NCC2705] gi|322689435|ref|YP_004209169.1| exodeoxyribonuclease [Bifidobacterium longum subsp. infantis 157F] gi|322691402|ref|YP_004220972.1| exodeoxyribonuclease [Bifidobacterium longum subsp. longum JCM 1217] gi|23326663|gb|AAN25190.1| possible exodeoxyribonuclease [Bifidobacterium longum NCC2705] gi|320456258|dbj|BAJ66880.1| putative exodeoxyribonuclease [Bifidobacterium longum subsp. longum JCM 1217] gi|320460771|dbj|BAJ71391.1| putative exodeoxyribonuclease [Bifidobacterium longum subsp. infantis 157F] Length = 286 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 79/311 (25%), Gaps = 57/311 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-AVA 81 + + + N+N + + + +A D+ +QE+ + V Sbjct: 2 TITITTSNVNGIRA---------------AKRKGIEDWAGKHAPDVWCMQEVRAPQEDVD 46 Query: 82 KVFPKNTWCIFYSTERLINHS----KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +F + + + + + + ++ ++D Sbjct: 47 SIFGEFGFEYATAGKIASPSDLHSLNEVCRVKGRAGVGLLTDLEVTDKRYGLPGLSEDVD 106 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 S R + G I V +++ + DS + L + + + Sbjct: 107 S---GRWIETDVKTPQGYTITVACVYVHAGNTDDSTKMEQK--YRFLDTMLTRMGELRDE 161 Query: 198 KKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEK 241 V+ GDFN K +D + + Sbjct: 162 AAHGGKQAVLCGDFNIAHTPLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLA 221 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + IDY + + + D + R Sbjct: 222 GDIQGPYTWWSQRGRAFDNNVGWRIDYQFATPELAE-------TARGFVIDKAPTYELRW 274 Query: 293 SDHCPISIDYD 303 SDH P++I YD Sbjct: 275 SDHAPLTITYD 285 >gi|317011660|gb|ADU85407.1| exodeoxyribonuclease III [Helicobacter pylori SouthAfrica7] Length = 250 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 82/303 (27%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++DADI +QE + + + Sbjct: 1 MKLISWNVNGLRACMTKGFM---------------DFFNSVDADIFCIQE----SKMQQE 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + + D R Sbjct: 42 QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINIEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + ++++++ + S N + + L+ Sbjct: 91 -----VVTCEFESFYLVNVYTPNSQQALSRLNYRMSWEVEFKKFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|261879847|ref|ZP_06006274.1| endonuclease/exonuclease/phosphatase family protein [Prevotella bergensis DSM 17361] gi|270333506|gb|EFA44292.1| endonuclease/exonuclease/phosphatase family protein [Prevotella bergensis DSM 17361] Length = 321 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 40/333 (12%), Positives = 90/333 (27%), Gaps = 57/333 (17%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYT 55 + L+ FL+ +V N L + SL ++ + R Sbjct: 1 MYLITFLLSV-------FTVVELNCENLFDTVDDSLKQDEEFLPGSGRHWTPYRYWVKQN 53 Query: 56 LLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107 + Q + D+V L E+ + + V + ++ + DS Sbjct: 54 RIGQEILSCGMLDSMEVIPDLVALTEVENDSVVHDLTKRS-----LLKNAGYEYVVTDSP 108 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKS 166 + +A+ S + R + +G + V +H S Sbjct: 109 DQRGIDVALLYLPSSFRLLSSRSIRIPPFRHFRPTRDILCASGATASGDTLHVFVVHAPS 168 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDF 224 + Y A+ L I + + ++ GDFN Sbjct: 169 RSAGEKATRPY------RMHVARQLYGAIDSLRALYAQPGIIVMGDFNDYTGNASIQFLL 222 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY---- 280 + + + + + +D+ + D++ +++ S ++ + Sbjct: 223 SGGLRD---VSAEARGGHGAKGTYRYHSDWGSLDHILCDEHTAACVVKCSINDAPFLLEN 279 Query: 281 ----------NEDDIKSRGKRLSDHCPISIDYD 303 SDH P+ +D Sbjct: 280 EQKYGGVKPRRTYLGPRYLGGFSDHLPLVAVFD 312 >gi|226509154|ref|NP_001146094.1| hypothetical protein LOC100279626 [Zea mays] gi|219885683|gb|ACL53216.1| unknown [Zea mays] Length = 605 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 48/345 (13%), Positives = 92/345 (26%), Gaps = 64/345 (18%) Query: 22 QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-- 77 ++S+NI + + + S L + ADI+ LQE+ Sbjct: 253 GTFTVLSYNILADAYATTDAYSYCPTWALTWNYRRQNLLREIIGYHADIICLQEVQVNHF 312 Query: 78 -NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + K+ + Y +S D R K V + A S Sbjct: 313 EDFFSPELDKHGYQALYKKRTTEVYSGNPMAIDGCATFFRRDKFSHVKKYEVEFNKAAQS 372 Query: 137 FSR-----AGNRRAVELLVEINGKKIWVLDIHLKS-----------FCFLDSLENTYSPS 180 + A R A+ L++ N I VL+ + C ++ N + Sbjct: 373 LTDAIIPAAQKRVALSRLIKDNIALIAVLEAKFGNHGAENPGKRQLLCVANTHINVHQDL 432 Query: 181 CSLLSQQAQWLKDWITQKK-ESLVPFVIAGDFNRKINYLGN------------------- 220 + + L + + + +P ++ GDFN + Sbjct: 433 KDVKLWEVHTLLKGLEKIAVSADIPMLVCGDFNSTPGSSPHALLAMGKVDQHHPDLAIDP 492 Query: 221 -------------------NDDFWKTID---PNDSLIRFPKEKDSRCNANKNLRNKIPID 258 F + + + R + N ID Sbjct: 493 LGILRPPSKLNHQLPLVSAYSAFARMVGVGYDLEHQRRTDPATNEPLFTNCTRDFTGTID 552 Query: 259 YFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 Y + + E E +D + SDH + ++ Sbjct: 553 YIFYTADSLTVDSLLELLDEESLRKDTALPSPEWSSDHIALLAEF 597 >gi|325838966|ref|ZP_08166749.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter sp. HGF1] gi|325490621|gb|EGC92933.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter sp. HGF1] Length = 254 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 36/285 (12%), Positives = 78/285 (27%), Gaps = 36/285 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++++V++N+ + + + + + K+ D++ QE+ + ++ Sbjct: 3 NELKIVTFNLR--------ITVDDGLNVWENRVSHVVHKIKSEAPDLIGFQEL-TEISLR 53 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + T +F R S + P Sbjct: 54 DLKRQLTDYVFVGCGRDEQMSGEMVMIAYNKNKLDLMSLDIFWFSDTPYKPGSKKEMMTL 113 Query: 142 NRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + + + + V + + S + Q L D +++ Sbjct: 114 ARPCNVAVFKNQLTNQIFRVYNT-----------HYDHMQSSIRVQSSEQLLNDLHLREQ 162 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 +P +I GD N + I + L + KI IDY Sbjct: 163 NISLPTLIMGDMNSEPQDEEIKAIVNNEIIELNDLTDKLDYTFHD-----YGKIKIKIDY 217 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ G LSDH P+ + F Sbjct: 218 IFATKSVNASKAVAWADCF---------DGVYLSDHYPVMVRVTF 253 >gi|303248033|ref|ZP_07334299.1| exodeoxyribonuclease III [Desulfovibrio fructosovorans JJ] gi|302490590|gb|EFL50495.1| exodeoxyribonuclease III [Desulfovibrio fructosovorans JJ] Length = 254 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 73/304 (24%), Gaps = 80/304 (26%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L+SWN+N L + W + AD+V +QE F Sbjct: 3 LMSWNVNGLRAVVQKNFW---------------DWLSGCGADVVGIQESKIQPGHEADFG 47 Query: 86 KNT-WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + +S+ + ++ + + L D R Sbjct: 48 GTEVYRTVWSS---------ATVKKGYSGVGCFYRVEPHDIS----LELPDEAYVGEGRL 94 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 +++ + +++ + A+ L+ P Sbjct: 95 -----IQMEFDDFYFFNVYFPNGGRGPDRLAYKFGYYDAFLAHAETLRR--------KKP 141 Query: 205 FVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN + I + + + Sbjct: 142 IVVCGDFNTAHTALDLKNAKSNEKTSGFLPEERAWLDRFI--AAGYVDTFRMFEPEGGHY 199 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + + + SDHCP+ Sbjct: 200 TWWDYRFKARDRNVGWRIDYFFVSEELRGKVRRAWI-----------DSAVMGSDHCPVG 248 Query: 300 IDYD 303 +D D Sbjct: 249 LDLD 252 >gi|303276925|ref|XP_003057756.1| predicted protein [Micromonas pusilla CCMP1545] gi|226460413|gb|EEH57707.1| predicted protein [Micromonas pusilla CCMP1545] Length = 600 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 43/354 (12%), Positives = 93/354 (26%), Gaps = 68/354 (19%) Query: 19 SVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 K ++++N+ + + E + + + DADI+ LQE+ S Sbjct: 242 PDGGKFTVLTYNVLADLYATSELYHYTPSWALSWNYRRQNILKEIVMHDADILCLQEVQS 301 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV--------RVLQQSY 128 + + + S + + A+ K V Sbjct: 302 DHFEDFFQGELGKHGYTSVYKKKTTQVFSQGTYVIDGCAIFFKKDRFQLIKKYEVEFNKA 361 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF-----------CFLDSLENTY 177 L + + + A+ L++ N I VL+ + C ++ + Sbjct: 362 ALSLVESLGGSSQKKDALNRLMKDNVALIVVLEALEANGQQAPAGKRQLLCVANTHIHAN 421 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLV-PFVIAGDFNRKINYLGNNDDFWKTIDPNDS--- 233 + + Q L + + S P V+ GDFN +N +D Sbjct: 422 TELNDVKLWQVHTLLKGLEKIAASAEIPMVVCGDFNSTPGSAAHNLLTGGRVDAAHPELA 481 Query: 234 -------------------LIRFPKEKDSRC----------------------NANKNLR 252 + + C N Sbjct: 482 TDPFGILRPPSKLQHPLPLVSAYTALTKQPCLESEAAERQRSRVDGAGTGEPIFTNCTRE 541 Query: 253 NKIPIDYFVMDQNAYKF--LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +DY + L++ + ++ + SDH P+ ++ + Sbjct: 542 FFGALDYIFYTDDTLAPLGLLELPAESDVRSKYGGLPNTQSSSDHIPLMAEFQW 595 >gi|320354727|ref|YP_004196066.1| exodeoxyribonuclease III Xth [Desulfobulbus propionicus DSM 2032] gi|320123229|gb|ADW18775.1| exodeoxyribonuclease III Xth [Desulfobulbus propionicus DSM 2032] Length = 481 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 86/301 (28%), Gaps = 78/301 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVAK 82 +L+SWN+N L LDADI+ LQE+ + + Sbjct: 231 KLISWNVNGLRAVAKNGF---------------LDVLHELDADILALQEIKAHPDQLDDQ 275 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + F+ + + ++ AV K + L G + Sbjct: 276 LRNVSGYQSFWHSAKKKGYA----------GTAVFSKIPPLRV----LYGMEQPQFDDEG 321 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R ++ + ++++ + + L L+ S Sbjct: 322 R-----VLTLEYPDFYLINTYSPNAQPELKRLAFKQEFNRTLLAYMDRLR--------SE 368 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNAN 248 V+ GD N + + +P + ++ + Sbjct: 369 KTVVLCGDLNVAHKEIDLANPKANVKNPGFSEQERAWMDELIAAGYVDTFRQFNQEAGQY 428 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++D ++ +++ + SDHCP+S Sbjct: 429 TWWSYRFNARAKNIGWRIDYFIVDGSSRDRVLEAAIH-----------GEITGSDHCPVS 477 Query: 300 I 300 + Sbjct: 478 L 478 >gi|15597352|ref|NP_250846.1| hypothetical protein PA2156 [Pseudomonas aeruginosa PAO1] gi|9948174|gb|AAG05544.1|AE004642_11 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] Length = 245 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 86/256 (33%), Gaps = 43/256 (16%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVF-----PKNTWCIFY-STERLINHSKRDSN 107 LR+ +++ AD+VFLQE+ +++ P + S + + Sbjct: 26 LPELREAVRSVGADLVFLQEVLGSHSLHAARLPSWPPAPQYEYLADSMWPQFAYGRNAVY 85 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 + H AV K+ + ++ + A + R + +++I G+ + + +HL Sbjct: 86 PEGHHGNAVLSKHPILAHRNLDVSVAGN-----EERGLLHAVIDI-GRPLHAVCVHLGLR 139 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 + +Q Q L + + P V+AGDFN + Sbjct: 140 -------------EAQRQRQLQLLCELVAG-LPEREPVVVAGDFNDWRQRAD------RL 179 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + F + + +P+D + + S + Sbjct: 180 LAGCGLREVFVGAQGRPARSFPARWPVLPLDRIYLRNARGRQPRILS-----------RR 228 Query: 288 RGKRLSDHCPISIDYD 303 LSDH P++++ + Sbjct: 229 PWSHLSDHLPLAVEVE 244 >gi|310287159|ref|YP_003938417.1| Exodeoxyribonuclease III [Bifidobacterium bifidum S17] gi|309251095|gb|ADO52843.1| Exodeoxyribonuclease III [Bifidobacterium bifidum S17] Length = 285 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 31/282 (10%), Positives = 71/282 (25%), Gaps = 42/282 (14%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNA-VAKVFPKNTWCIF----YSTERLINHSKRDS 106 + + +A DI +QE+ + + +F + + + + + Sbjct: 15 AKRKGIETWAGEHAPDIWCMQEVRAPQDELNPIFGEFGFEYATAGKIADQSELTAMNEVC 74 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 + + ++ +D S R + G I V +++ + Sbjct: 75 RVKGRAGVGLLTDLPVTARRYGLSGLDEDVDS---GRWIEADVTTPQGYGITVACVYVHA 131 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN---------- 216 D ++ L + + + V+ GDFN Sbjct: 132 GNSDDPVKMAQK--YRFLDTMLTRMGELRDEASRGGRQAVLCGDFNIAHTPLDIKNAKAN 189 Query: 217 ------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFV 261 + + + + + IDY Sbjct: 190 IKHAGFLPAERAYIDRWLGEYEFVDVIRSLAGDIQGPYTWWSQRGRAFDNNVGWRIDYQF 249 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + D S R SDH P+++ YD Sbjct: 250 ATPELAE-------TARGFVIDKAPSYDARWSDHAPLTVTYD 284 >gi|295090629|emb|CBK76736.1| Metal-dependent hydrolase [Clostridium cf. saccharolyticum K10] Length = 324 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 35/318 (11%), Positives = 77/318 (24%), Gaps = 61/318 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L++ N ++L E++ + + D++ LQE+ + Sbjct: 1 MKLLTLNTHSLEEKD-----------YEKKLKIFTEEILKEKPDVIALQEVNQPLDGEEA 49 Query: 84 FPKNTWCIFYSTER-------------------------------LINHSKRDSNNDIHT 112 + + S + Sbjct: 50 DGEVLKKSGFIPCPSEPPSCAVPVRLGNHGLRAAQLLRRSGFPVFWTWTSAKVGYGKYDE 109 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 +A+ + L +D + R+A+ + + I + V + + D Sbjct: 110 GMALMSRRPIAEVSQLFLTDGRDYNNWK-TRKALAITLNIGKGEEPVSFVTAHMGWWKDE 168 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 E Q + L + + GDFN + + G D D Sbjct: 169 EEPFSR--------QWERLDAF-ASSLRRRADVWLMGDFNTQDSVRGEGYDRITASGWTD 219 Query: 233 SLIRFPKEKDSRCNANKNLRNKI-------PIDYFVMD--QNAYKFLIQESFSEILYNED 283 + K + IDY ++ + Sbjct: 220 AYRAAGKRDGGITVPGAIDGWREDGEVPGMRIDYIWYGRKHDSGDRKSRGDVLIEEVRTV 279 Query: 284 DIKSRGKRLSDHCPISID 301 S +SDH + + Sbjct: 280 FNGSDCPAVSDHFGVLAE 297 >gi|291616783|ref|YP_003519525.1| YbhP [Pantoea ananatis LMG 20103] gi|291151813|gb|ADD76397.1| YbhP [Pantoea ananatis LMG 20103] Length = 265 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 82/288 (28%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ N + LR+ + ADIV LQE+ + + Sbjct: 21 SFKVLTINTHKGFAPFNRRF----------ILPELREAVRATSADIVLLQEVMGTHDIHP 70 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P + F + + + + + H AV + Q+ + A Sbjct: 71 LQHENWPNTSHYEFLADTMWNDFAYGRNAVYPEGHHGNAVLSRFPIAEYQNRDVSVAG-- 128 Query: 137 FSRAGNRRAVE--LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + NR + + + + V+ +HL + Q L + Sbjct: 129 ---SENRGMLHCQITLPAPYGTLHVICVHLGLK-------------AAHRRAQMTMLNEM 172 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + P V+AGDFN + F + Sbjct: 173 VLA-LPPDAPVVVAGDFNDWQGRANKILQKGAGLKE-----VFSIKHGRPARTFPARFPL 226 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + + LSDH P++++ Sbjct: 227 LRLDRIYVRNA-----------TVSHPWALPRKPWSHLSDHAPLAVEI 263 >gi|167767320|ref|ZP_02439373.1| hypothetical protein CLOSS21_01839 [Clostridium sp. SS2/1] gi|167711295|gb|EDS21874.1| hypothetical protein CLOSS21_01839 [Clostridium sp. SS2/1] gi|291559374|emb|CBL38174.1| exodeoxyribonuclease III [butyrate-producing bacterium SSC/2] Length = 250 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 79/303 (26%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N + + DADI +QE Sbjct: 1 MKFISWNVNGIRACVKKGF---------------LDFFNETDADIFCIQESKMQEG-QLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S T I +++ + V G R Sbjct: 45 LNLPGYHQYWNYAVKKGYSG--------TGIFTKEEPISV------FYGLGIEEHDQEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + K + + ++ + + + + L++ Sbjct: 91 -----VITLEFKDYYFITVYTPNSQSELARLSYRMKWEEDFLAYLKKLEE--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + +TI N + F + Sbjct: 138 PVIFCGDLNVAVEEIDLKNPKTNRKNAGFTDEEREKMRTILSNGFIDTFRYLYPDQTGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ + + SDHCPI Sbjct: 198 SWWSYRFNARKNNAGWRIDYFIVSECLKDRISDAKILT-----------DVMGSDHCPIE 246 Query: 300 IDY 302 +D+ Sbjct: 247 LDF 249 >gi|14861060|dbj|BAB62089.1| deoxyribonuclease I precursor [Cynops pyrrhogaster] Length = 354 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 88/306 (28%), Gaps = 29/306 (9%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 + ++ + + ++ S+NI S S T L Q Sbjct: 1 MTPATFWVLLLVATSFYCTSHAFKVASFNIARFSM---------SKVTDTVVRDRLVQIL 51 Query: 62 KNLDADIVFLQEMGS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 + + ++ +QE+ S A+ + + + L++ S A R+ Sbjct: 52 RRYE--LISIQEVMSAENEAIISLVRELSQATGLPYNVLVSDHLGRSTYREKYAYVYRED 109 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 ++ + + G ++ + R + L + ++ + Sbjct: 110 ILKPTEWYHYDDGCENCGTDVFMREPFVARFSSLTTVVKDLALVSIHTSPDYAVREVDAL 169 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 Q + L +I GD+N Y+ N + L Sbjct: 170 FDVWEDVQQRLL----------TQNILILGDYNADCKYVTNKHWPTIRLRHEPQLHWLIS 219 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQ-NAYKFLIQESFSEILYNEDDIKSRGKR--LSDHC 296 + + + D FV + E+ + Y+E + + +SDH Sbjct: 220 DDEDTTVSTNTH---CAYDRFVASGVEMLNAIFPETATAFNYHEAYGLTYEEAKDVSDHY 276 Query: 297 PISIDY 302 P+ + Sbjct: 277 PVEMQL 282 >gi|295425010|ref|ZP_06817719.1| exodeoxyribonuclease III [Lactobacillus amylolyticus DSM 11664] gi|295065328|gb|EFG56227.1| exodeoxyribonuclease III [Lactobacillus amylolyticus DSM 11664] Length = 275 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 82/305 (26%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + R + + + D++ +QE Sbjct: 1 MKLISWNIDSLNAALTGQSTRALETR------KILERLHDEAPDVLAIQETKLPATGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + S + + K L+ SYP +GA + G Sbjct: 55 KHQTILKEMFPEYKYFWRSSEEPARKGYAGTMYLYKKGLELKASYPKIGAPEPMDSEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V ++ + + Q L + Sbjct: 114 -----IITLEFPTFFVTQVYTPNSGNGLKRLADRQVWDQRYIEYLQQL--------DKQK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + +GDFN + + + F K + Sbjct: 161 PVLASGDFNCAHTPIDLKHPENNHHSAGFTDEERKDFTQLLDAGFTDSFRKINGNVEGVY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + DHCPI Sbjct: 221 SWWAQRVRTAKANNSGWRIDYWLTSNRIADKIRRSEMIDTGKRA-----------DHCPI 269 Query: 299 SIDYD 303 +D D Sbjct: 270 LLDID 274 >gi|261362100|gb|ACX71483.1| sphingomyelinase [Bacillus mycoides] Length = 244 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 83/218 (38%), Gaps = 21/218 (9%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTNQNNTLKVMTHNVYMLSTS----LYPNWGQNERADLIGAADYMK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 NA ++ T E S+ +A+ K + + Sbjct: 83 DNNASNRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGNYSSSTPEDGGVAIVSKWPIIEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V V+ N + + V+ HL++ D++ SP+ S+ ++ Sbjct: 143 QY-VFEKGCGPDNLSNKGFVYTKVKKNDRFVHVIGTHLQA---EDNMCGQTSPA-SVRTK 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDD 223 Q Q ++++I + + +I GD N NN D Sbjct: 198 QLQEIQEFIKNKNISNNEYVLIGGDMNVNKINAENNSD 235 >gi|256820279|ref|YP_003141558.1| exodeoxyribonuclease III Xth [Capnocytophaga ochracea DSM 7271] gi|256581862|gb|ACU92997.1| exodeoxyribonuclease III Xth [Capnocytophaga ochracea DSM 7271] Length = 254 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 36/300 (12%), Positives = 84/300 (28%), Gaps = 73/300 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+N+N + ++ K+ + D++ LQE+ + Sbjct: 1 MKIISYNVNGIRAALTKGF---------------AEWLKSANPDVLCLQEIKATED---- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 +S + ++ +A+ K + +G + R Sbjct: 42 ---QIPTEVFSELGYKYQYYHSAEKKGYSGVAILSKIEP----KHVEIGTGIDYMDKEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + + V+ ++L S D K +I + K+ + Sbjct: 95 -----VLRADFETLSVMSLYLPSGTNPD--------RLDFKLTFMADFKKYIDKLKQKVP 141 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249 VI GD+N + +D I + + Sbjct: 142 NLVICGDYNICHEAIDIHDPIRNANVSGFLPIEREWLDKFMKSGFIDSFRYFHKEAHQYS 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY ++ + + + SDHCPI + Sbjct: 202 WWSYRANARNNNKGWRIDYHLVSAPLENRMERALIL-----------PEAKHSDHCPILL 250 >gi|213021237|ref|NP_001132943.1| DNA-(apurinic or apyrimidinic site) lyase [Sus scrofa] gi|210062866|gb|ACJ06403.1| APEX nuclease 1 [Sus scrofa] Length = 318 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + + +++ SWN++ L + K DI+ LQE Sbjct: 53 TSPSGKSATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K + + + S+ + ++ + + + + G Sbjct: 98 KCSE------NKLPAELQELSGLPHQYWSAPSDKEGYSGVGLLSRQCPLKVS----YGIG 147 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R V ++ ++ + + + L Sbjct: 148 EEEHDQEGRVIVA-----EFDAFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 201 ------SHKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ + L Sbjct: 255 HLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 306 --GSDHCPITL 314 >gi|46200513|gb|AAL73527.2|AF466200_6 putative AP endonuclease [Sorghum bicolor] Length = 348 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 36/336 (10%), Positives = 88/336 (26%), Gaps = 95/336 (28%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + + ++WN N+L + R SD+ Q LD D++ +Q Sbjct: 44 PAEEPRKFLTWNANSL------------LLRMKSDWPAFSQLVARLDPDVICVQ------ 85 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 V + + + + L + TA+ ++KK + + Sbjct: 86 VVLRALSTSPFKDYRVWWSLSDSKYAG------TAMFIKKKFEPKKVSFNLDRTSSKHET 139 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 ++ + +L+ + + + S + + + +++ Sbjct: 140 DGR-------VIIAEFESFLLLNTYAPN-----NGWKEEENSFQRRRKWDKRMLEFVQHV 187 Query: 199 KESLVPFVIAGDFNRKINY-------------------------------LGNNDDFWKT 227 P + GD N F Sbjct: 188 ---DKPLIWCGDLNVSHEEIDVSHPDFFSSAKLNGYTPPNQEDCGQPGFTPAERRRFGNI 244 Query: 228 IDPNDSLIRFPKEKDS--------------------RCNANKNLRNKIPIDYFVMDQNAY 267 + + + +++ ++ IDYF++ + Sbjct: 245 LFQGKLVDAYRHLHKEKDMDGGFSWSGHPIGNEINFSAYSSRYRGKRMRIDYFLVSEQLK 304 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ D G SDHCP++++ Sbjct: 305 DRIVSCEMHGRGIELD-----GFYGSDHCPVTLELS 335 >gi|330792503|ref|XP_003284328.1| hypothetical protein DICPUDRAFT_75271 [Dictyostelium purpureum] gi|325085781|gb|EGC39182.1| hypothetical protein DICPUDRAFT_75271 [Dictyostelium purpureum] Length = 294 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 80/313 (25%), Gaps = 57/313 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ S+NI + + + W L+ L I+ QE N + Sbjct: 6 LRVCSYNIRYDNIDDKQNQWVYRKM-------LVFSNIAFLKPHIIGFQECLFNQINDLK 58 Query: 82 KVFP---KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + + S +T + + P S+ Sbjct: 59 EGLLEKFGMNYDYIGLGRDDGEKNGEFSPIFYNTDKVELVHSHQFWISETPYKPGTKSWK 118 Query: 139 RAGNRRAVE--LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 A R + + K + L+ HL + + Sbjct: 119 TACPRIVTWGLFKFKKSNKLFYFLNTHLDHLS-------------ESARYEGTLMIKSFI 165 Query: 197 QKKESLVPFVIAGDFNRKINYLGN-------------------------NDDFWKTIDPN 231 + +P V+ GDFN +D ++T+ N Sbjct: 166 ATLKPQIPLVLVGDFNSNEYQKPIINIVSSSIDIIKSKKYLELLEIPLRDDILFQTLF-N 224 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + K N + IDY ++Q SF + I Sbjct: 225 ARNVANCKIGPDHTFTGFNGQFTENIDYIFINQQF----KTTSFIVFNNHPSKITKSSTI 280 Query: 292 LSDHCPISIDYDF 304 SDH PI D F Sbjct: 281 ASDHFPIIADLQF 293 >gi|317497391|ref|ZP_07955713.1| exodeoxyribonuclease III [Lachnospiraceae bacterium 5_1_63FAA] gi|316895311|gb|EFV17471.1| exodeoxyribonuclease III [Lachnospiraceae bacterium 5_1_63FAA] Length = 250 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 79/303 (26%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N + + DADI +QE Sbjct: 1 MKFISWNVNGIRACVKKGF---------------LDFFNETDADIFCIQESKMQEG-QLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S T I +++ + V G R Sbjct: 45 LNLPEYHQYWNYAVKKGYSG--------TGIFTKEEPISV------FYGLGIEEHDQEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + K + + ++ + + + + L++ Sbjct: 91 -----VITLEFKDYYFITVYTPNSQSELARLSYRMKWEEDFLAYLKKLEE--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + +TI N + F + Sbjct: 138 PVIFCGDLNVAVEEIDLKNPKTNRKNAGFTDEEREKMRTILNNGFIDTFRYLYPDQTGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ + + SDHCPI Sbjct: 198 SWWSYRFNARKNNAGWRIDYFIVSECLKDRISDAKILT-----------DVMGSDHCPIE 246 Query: 300 IDY 302 +D+ Sbjct: 247 LDF 249 >gi|302039598|ref|YP_003799920.1| exodeoxyribonuclease III [Candidatus Nitrospira defluvii] gi|300607662|emb|CBK43995.1| Exodeoxyribonuclease III [Candidatus Nitrospira defluvii] Length = 257 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 31/306 (10%), Positives = 76/306 (24%), Gaps = 76/306 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N+L ++ Q+ + D++ LQE ++ Sbjct: 1 MKIATFNVNSL----------------RKRLPIVLQWLERHQPDVLCLQETKVQDS---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + G D R R Sbjct: 41 ------EFPLTALATSGYEITFRGMKAYNGVAILSRTKPEAIS----YGFDDGGEREEAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + I +++ ++ +DS + Y L+ Sbjct: 91 LLRVVI-----QGIPIINTYVPQGFEIDSPKYQYK------LGWYDRLRKHFETHLSPKE 139 Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P + GD N + + + KT+ Sbjct: 140 PAIWCGDMNVAPRPIDVHSPEKHLKHVCYHEDARNAYGKTV--AWGFEDVFCRLYPDRQQ 197 Query: 248 NKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ + + + D R SDH Sbjct: 198 FTFFDYRAPSALAANKGWRIDHILATPPLAQRC-------RRVDVDLEPRRATDPSDHTV 250 Query: 298 ISIDYD 303 + ++ Sbjct: 251 LWAEFS 256 >gi|325846697|ref|ZP_08169612.1| exodeoxyribonuclease III [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481455|gb|EGC84496.1| exodeoxyribonuclease III [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 275 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 84/305 (27%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++SWNI++L+ + + R + DADI+ LQE Sbjct: 1 MKIISWNIDSLNAALTSDSNRAKMSRD------VLDTIIKEDADIICLQETKLPRTGPSK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 K ++ S ++ + K SYP L A D+ + Sbjct: 55 KHKQILESYFPQYNYAWISSQEPARKSYAGCLTFYKKEFEPIISYPTLDAPDTMDQE--- 111 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + +E + ++ ++ + S + + + L Sbjct: 112 -ARIITLEFDN--FYLTQVYTPNAGSGLSRLDLRQVWDKKYANYLEKLDQ--------NK 160 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GDFN + + + F Sbjct: 161 PVIACGDFNVAHKEIDLKHPENNHKSAGFTDEERSGFTNLLNKGFVDTFRYLHGDVEGKY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF++ + + + + + DH PI Sbjct: 221 TWWAQRVKTSKINNSGWRIDYFIVSDRIKEKIKESDMIDSGDRQ-----------DHTPI 269 Query: 299 SIDYD 303 I+ D Sbjct: 270 YINID 274 >gi|265750587|ref|ZP_06086650.1| predicted protein [Bacteroides sp. 3_1_33FAA] gi|263237483|gb|EEZ22933.1| predicted protein [Bacteroides sp. 3_1_33FAA] Length = 334 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 41/280 (14%), Positives = 78/280 (27%), Gaps = 56/280 (20%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + +++LV WN + T + L IV LQE N + Sbjct: 93 SNQLKLVCWNTEGFRLNKDT-------------LTKAAHSIRVLQPGIVCLQERPHTNLL 139 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 A W + + +S D +AV + Q Y + + Sbjct: 140 A-------WDTIRAAFPDYPYCIINSREDEVLNLAVFSRWPIGNVQEYYFPNSYNK---- 188 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL-----LSQQAQWLKDWI 195 ++ +++ G+ + ++HL++ +S ++QA L I Sbjct: 189 ----ILQADIQMTGQTFRLFNVHLQTTGMNESYSMKDRFQAMRHHTVQRNRQADLLTKAI 244 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + S P ++ GDFN + + +C + Sbjct: 245 AE---SPYPVIVCGDFNDTPASYAYRK-ISRLLQDCFLQAGQTWSGSYQCWGGF-----L 295 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 IDY + + SDH Sbjct: 296 RIDYTFCSPA--------------FQVNRYLLISNPWSDH 321 >gi|254796778|ref|YP_003081615.1| exodeoxyribonuclease III [Neorickettsia risticii str. Illinois] gi|254590017|gb|ACT69379.1| exodeoxyribonuclease III [Neorickettsia risticii str. Illinois] Length = 260 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 79/305 (25%), Gaps = 73/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N + + D D++ LQE+ + Sbjct: 2 LKVATWNVN----------------SIRQRAEAVSALLVSEDLDVLLLQELKCQES---- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++++ + +A+ + + + + Sbjct: 42 ------DFPLHVFHDLSYNVILKCQKGYNGVAIASRLPITKISDEIYMDGEARY------ 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 VE ++ K I ++ +++ + S Y Q L I + Sbjct: 90 --VEGVISFFDKCIRLISVYVPNAQAAGSPRFEYK------MQFHDALARRIHCYLLNNN 141 Query: 204 PFVIAG-DFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247 ++ G D N + D + + F + K Sbjct: 142 DIILLGGDMNAAPEDIDVYDHVKLDGCTGFHIEERSKLRELLNLGLFDTF-RMKYPTKQE 200 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + ID+ + L+ + L + R SDH P+ Sbjct: 201 FSWWDYRGGGLQRNEGMRIDHILASAEGMDHLLDCYILKELRHIA-------RPSDHVPV 253 Query: 299 SIDYD 303 + Sbjct: 254 VCVLN 258 >gi|169345728|ref|ZP_02865687.1| exodeoxyribonuclease III [Clostridium perfringens C str. JGS1495] gi|169297128|gb|EDS79244.1| exodeoxyribonuclease III [Clostridium perfringens C str. JGS1495] Length = 250 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 38/299 (12%), Positives = 74/299 (24%), Gaps = 78/299 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L Y K+ DADI LQE Sbjct: 1 MKLISWNVNGLRACVKKGF---------------LDYFKSEDADIFCLQETKLQEG-QID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + G R Sbjct: 45 LDLEGYFQYWNYAEKKGY----------SGTAIFTKKEPLNV----YYGINMEHHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + L S Sbjct: 91 -----VITLEFEDFFMVTVYTPNSQSELARLEYRMEWEDDFRNYLLEL--------SSKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GD N D + T+ + + F Sbjct: 138 GVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDKFSTLLSSGFIDTFRYFNPDLEGVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF++ N + + + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEAFIDTEIL-----------GSDHCPV 245 >gi|47210833|emb|CAF93174.1| unnamed protein product [Tetraodon nigroviridis] Length = 288 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 89/307 (28%), Gaps = 38/307 (12%) Query: 2 IRKYV-LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 ++ ++ L + FF A A R+ ++N+++ E + + +S L Q Sbjct: 1 MKSFICLVIFFFAGLGHAYGASHFRICAFNLHSFGE---------AKAKKSSVMRTLTQI 51 Query: 61 AKNLDADIVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHS--KRDSNNDIHTAIAV 116 D+ LQE+ A++++ + + + R + Sbjct: 52 IARC--DVTLLQEVRDRKERALSELLERLNRFQAEHRYQAVASQRLGRSDSYQEQYVFVY 109 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 R V Y + A R + I + + ++ Sbjct: 110 RADTATVTGH-YQSPDNRPGDVDAFAREPFVVRFRAPKTAIKEFVLIPQHTAPANT---- 164 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 S L Q ++ ++ S + + I + Sbjct: 165 -SKELDALYDVLQDVRKMWKTEETSTQTV---------PTMAKRKREKLQLITDKNLHWL 214 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--S 293 E D+ A+ + D V+ Q ++ S + + + + L S Sbjct: 215 IADETDTTVRASTSCSY----DRIVVHGQRFASAVVPSSAKAFNFQMEYGLTEEQALEVS 270 Query: 294 DHCPISI 300 DH P+ + Sbjct: 271 DHYPVEV 277 >gi|67904338|ref|XP_682425.1| hypothetical protein AN9156.2 [Aspergillus nidulans FGSC A4] gi|40742799|gb|EAA61989.1| hypothetical protein AN9156.2 [Aspergillus nidulans FGSC A4] gi|259485420|tpe|CBF82427.1| TPA: endonuclease/exonuclease/phosphatase family protein (AFU_orthologue; AFUA_3G09210) [Aspergillus nidulans FGSC A4] Length = 600 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 37/328 (11%), Positives = 78/328 (23%), Gaps = 67/328 (20%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79 + + + S+N+ L+ + + + N I+ LQE+ Sbjct: 291 EALAIGSYNVENLTPTSD-------------NIEAIADHIANYLNGPAIMCLQEIQDNTG 337 Query: 80 VAK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + F + + +I A V Sbjct: 338 ATDDGVVDANVTLSTLAELISAAGGPDYD-FTEIAPIDGEDGGEPGGNIRVAYLYDPTIV 396 Query: 122 RV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLD 161 ++ + P L + + +R+ + E + ++ Sbjct: 397 QLHNPNPGTSTDANEVQSGPELKYNPGLIDPTNEAWEASRKPLVAAWETVDGKNTFYTIN 456 Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKI 215 +H S L+ P + QA+ + +IT E + GDFN Sbjct: 457 VHFTSKGGGSYLQGDERPPVNGGVEQRTAQAEVVASFITSILEEDASAKILTTGDFNEFT 516 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 L N +D+ + + + E Sbjct: 517 FAAPLKTFVSA--SGLQDLDEVVGVDPLERYTYIYDSNHEQLDHMFVSEALAEGARMEHV 574 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + SDH P + Sbjct: 575 HV-----NTWVNYDDAPSDHDPSVAVLN 597 >gi|298674416|ref|YP_003726166.1| deoxyribonuclease I [Methanohalobium evestigatum Z-7303] gi|298287404|gb|ADI73370.1| Deoxyribonuclease I [Methanohalobium evestigatum Z-7303] Length = 447 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 33/285 (11%), Positives = 78/285 (27%), Gaps = 34/285 (11%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YN 78 + +R+ ++NI S + + +N DI+ +QE+ N Sbjct: 59 SDTLRIGAFNIQVFGT---------SKASEPETMNTIAKIIRNY--DIIAIQEIRDKSEN 107 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 ++ ++ + + R + + + A V + P + + Sbjct: 108 SLPQLVELVNEGDYNYDFVMSERLGRTVSKEQY---AYIYNTATVDISNNPHTYPEPEGT 164 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 +R+ E I + + + + ++ +K Sbjct: 165 DPFHRQPYIASFEAVNGNFDATFITVHTDP----------DEATEEINALDSVVEYTHEK 214 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 F++ GD N +Y D T+ + + D+ + D Sbjct: 215 YSEERDFIVMGDLNADGSYFDE--DLDSTMHNDYYYWCIGDDIDTTTGSTDY-----TYD 267 Query: 259 YFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ F D +SDH P+ + Sbjct: 268 RIIITEPAMEDFTDDAHIYRYDDKYDLKHDETMDVSDHYPVYATF 312 >gi|237710997|ref|ZP_04541478.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229454841|gb|EEO60562.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 334 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 41/280 (14%), Positives = 78/280 (27%), Gaps = 56/280 (20%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + +++LV WN + T + L IV LQE N + Sbjct: 93 SNQLKLVCWNTEGFRLNKDT-------------LTKAAHSIRVLQPGIVCLQERPHTNLL 139 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 A W + + +S D +AV + Q Y + + Sbjct: 140 A-------WDTIRAAFPDYPYCIINSREDEVLNLAVFSRWPIGNVQEYYFPNSYNK---- 188 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL-----LSQQAQWLKDWI 195 ++ +++ G+ + ++HL++ +S ++QA L I Sbjct: 189 ----ILQADIQMTGQTFRLFNVHLQTTGMNESYSMKDRFQAMRHHTVQRNRQADLLTKAI 244 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + S P ++ GDFN + + +C + Sbjct: 245 AE---SPYPVIVCGDFNDTPASYAYRK-ISRLLQDCFLQAGQTWSGSYQCWGGF-----L 295 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 IDY + + SDH Sbjct: 296 RIDYTFCSPA--------------FQVNRYLLISNPWSDH 321 >gi|28867571|ref|NP_790190.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213971019|ref|ZP_03399140.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato T1] gi|301385582|ref|ZP_07234000.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato Max13] gi|302058834|ref|ZP_07250375.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato K40] gi|302132137|ref|ZP_07258127.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28850806|gb|AAO53885.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213924255|gb|EEB57829.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato T1] Length = 291 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 38/292 (13%), Positives = 81/292 (27%), Gaps = 58/292 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 ++RL+S+NI E + + + + D D+V L Sbjct: 30 PEDGRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHVGRAGNLQKIGDLIN--DFDLVAL 87 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE+ + + + R+ + V + + +PL Sbjct: 88 QEVDGGSMRSGFVNQVEHLAQLGGFPFWYQQLNRNLGRFAQHSNGVLSRLRPTKIEDHPL 147 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G R A+ + + V+ +HL ++Q + Sbjct: 148 PGPAG-------RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQLAY 187 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 +++ I V+ GD N N L + + + Sbjct: 188 IRELIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 233 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + +D+ ++ +Q I SDH P++++ Sbjct: 234 WRPQRCLDHILLSPTLTLERVQVLAHPI--------------SDHLPVAVEI 271 >gi|27379180|ref|NP_770709.1| exodeoxyribonuclease III [Bradyrhizobium japonicum USDA 110] gi|27352331|dbj|BAC49334.1| exodeoxyribonuclease III [Bradyrhizobium japonicum USDA 110] Length = 256 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 36/302 (11%), Positives = 79/302 (26%), Gaps = 70/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN ++ L + + D+V LQE+ + + Sbjct: 1 MKIATFNINNIN----------------RRLPNLLAWMRAAKPDVVALQELKASDG---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ ++ + L G D R Sbjct: 41 ------EFPAAAIEKAGYGAVWRGQKTWNGVAILARDAEPILTRDRLPGGSD---DHEAR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + I V I+L + + Y LK + + Sbjct: 92 YIEAAV-----RGIIVTSIYLPNGNPQPGPKFDYKLD------WFARLKRHAKTFIKQDL 140 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGD+N + + ++ + + Sbjct: 141 PVVLAGDYNVAPTAIDIYPTRSWDKDALIQPKSRAAFASLVAQGWGDAIRELHPDKRIYT 200 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +D+ ++ L + + + ED SDH P I Sbjct: 201 FWDYKRNRWPRDAGLRLDHLLLSPALISRLAKAGVDKKVRGED-------GASDHAPAWI 253 Query: 301 DY 302 Sbjct: 254 VL 255 >gi|157825475|ref|YP_001493195.1| exodeoxyribonuclease III [Rickettsia akari str. Hartford] gi|157799433|gb|ABV74687.1| exodeoxyribonuclease III [Rickettsia akari str. Hartford] Length = 277 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 78/306 (25%), Gaps = 72/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V+WNIN+L LLR+ DI+ LQE +++ Sbjct: 1 MKIVTWNINSL----------------RLRIDLLRKLVYEHQPDIILLQETKVSDSL--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + S + +A+ K S L + R Sbjct: 42 ------FPLEVIKNIGYEHVIYSGQKSYNGVAIISKFPLNNVFSLELYNSDK-------R 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ +I +V D + + + + +++W+T + Sbjct: 89 HIAAIVNDIEIHNFYV-------PAGGDIPDIDANLKFKHKLEYVRLMQEWLTTNRTRND 141 Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 +I GD N + + + + Sbjct: 142 KIIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSLLVELQNSLSFIDSSRYFVPLDEKF 201 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + N L + + SDH P Sbjct: 202 YTWWSYRNIDWKKSNRGRRLDHIWVSNNLKDAL-------FSMHLLSEARDWLQPSDHVP 254 Query: 298 ISIDYD 303 + D Sbjct: 255 YFVTLD 260 >gi|110639788|ref|YP_679998.1| endonuclease/exonuclease/phosphatase family protein [Cytophaga hutchinsonii ATCC 33406] gi|110282469|gb|ABG60655.1| endonuclease/exonuclease/phosphatase family protein [Cytophaga hutchinsonii ATCC 33406] Length = 339 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 85/304 (27%), Gaps = 42/304 (13%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 + ++ ++S+NI + + S R + + K +AD++ L Sbjct: 66 VTFSGSEEQQAELSVLSYNIRLFNVYPQYADKTFSSSR------KIIDFIKKSEADVLCL 119 Query: 72 QEMGSY------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 QE + N + ++ K + F T + + I R K V + Sbjct: 120 QEFYNDPKDTLFNTIHRIRKKYKYYYFSETYKNRAGASFGMIIFSKYPIKNRGKVVFHER 179 Query: 126 QSYPLLGAKDSFSRAGNRR--AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + + A R + IN K+I + KS + + + Sbjct: 180 SNNQTIYADVLLPNKTVRIYNMHLQSMSINDKEIAESNFDTKSKTNVLNAFTKFKKGTIN 239 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKE 240 S Q L I S ++ GD N D + + + Sbjct: 240 RSIQVDTLVGHIKA---SPYKVIVCGDLNDPPYSYTYETLSDQLNNAFEEKGNGLGITFN 296 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID DQ+ I + + DH P+ Sbjct: 297 GRLPF---------LRIDQQFCDQD---------IEVIRFETQHNITYT----DHFPVKA 334 Query: 301 DYDF 304 Y F Sbjct: 335 GYVF 338 >gi|163802759|ref|ZP_02196649.1| tryptophanyl-tRNA synthetase [Vibrio sp. AND4] gi|159173466|gb|EDP58288.1| tryptophanyl-tRNA synthetase [Vibrio sp. AND4] Length = 975 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 40/378 (10%), Positives = 91/378 (24%), Gaps = 96/378 (25%) Query: 20 VAQKVRLVSWNINTLSEQ--EGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVF 70 +R+ S+N+ + R + + +DADI+ Sbjct: 471 ADSDLRIASFNVLNYFTSVADSGHENPTGQNRGATHLDEFLIQQAKIVAAMNKMDADIIG 530 Query: 71 LQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L E+ + +AV + ++ + ++ ++ ++ I AI Sbjct: 531 LMEVENNGFGDTSAVKNLVDALNAEIDEVEDHYTYVEIEDQDKYQNQYLGSDAIMVAILY 590 Query: 117 RKK--------NVRVLQQSYPLLGA--------KDSFSRAGNRRAVELLVEIN--GKKIW 158 R V + + + R ++ + GK + Sbjct: 591 RADAVTPKEAAKVIATPEQHIEENTITRNNGAEGNPAYDKYQRHSLLQTFTVKETGKDLS 650 Query: 159 VLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207 V+ H KS + + A + D + + ++ Sbjct: 651 VVVNHFKSKGSECIEEWVAGVEDSEPADLQGNCNNFRVSAANVVGDALKSIEGD---VLV 707 Query: 208 AGDFNRKINYLG---------------NNDDFWKTIDPN-------------DSLIRFPK 239 GD N + +D Sbjct: 708 VGDLNAYGMEDPLLTLTDYSKEKYGRDIYTAAYTNVDGGEIQVDKSKIDKGYGYYNLNTL 767 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291 + + +D+ + + ++ I E ++ + Sbjct: 768 LHGADTFSYTYSGELGNLDHALASNGLAQKVVAIEDWHINSLESNLFEYSSKYTGDMPKY 827 Query: 292 -----LSDHCPISIDYDF 304 SDH P+ I DF Sbjct: 828 QDAFSASDHDPVIIAIDF 845 >gi|219884049|gb|ACL52399.1| unknown [Zea mays] Length = 493 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 37/313 (11%), Positives = 91/313 (29%), Gaps = 70/313 (22%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + + ++++SWN+N L + ++Q A+ D D++ LQE Sbjct: 224 PPLSKDTRALKIMSWNVNGLKALLKSRGF------------SVQQLAQREDFDVLCLQET 271 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 +V + ++ + ++ A+ + + + + Sbjct: 272 KMQEKDIEVIKDTLLDGYTNSFWT-----CSVSKLGYSGTAIISRVKPLSIKYGLGISDH 326 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKD 193 D+ R +V + ++L ++ + L L + L + L+ Sbjct: 327 DTEGR---------VVTVEFDDFYLLTAYVPNSGDGLKRLTYRVTEWDPSLGNYMKELEK 377 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFP 238 P ++ GD N + +D + Sbjct: 378 --------SKPVILTGDLNCAHQEIDIHDPAGDRRSAGFTNEERESFGTNFLSKGFVDTF 429 Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 +++ A + +DYF++ ++ + + D Sbjct: 430 RKQHPNVVAYSYWGYRHNARKTNKGWRLDYFLVSESITEKVH-----------DSYILPD 478 Query: 290 KRLSDHCPISIDY 302 SDH P+ + Sbjct: 479 ISASDHSPLGLVL 491 >gi|213961670|ref|ZP_03389936.1| exodeoxyribonuclease III [Capnocytophaga sputigena Capno] gi|213955459|gb|EEB66775.1| exodeoxyribonuclease III [Capnocytophaga sputigena Capno] Length = 254 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 86/302 (28%), Gaps = 73/302 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+N+N + + K+ + D++ LQE+ K Sbjct: 1 MKIISYNVNGIRAALTKGF---------------ADWLKSANPDVLCLQEI-------KA 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + ++ +A+ K + +G + R Sbjct: 39 LEDQIPTEIFTELGYTYQYYHSAEKKGYSGVAILSKIAP----KHVEVGTGIDYMDKEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + + V+ ++L S +D + +I + K+++ Sbjct: 95 -----VLRADFETLSVMSLYLPSGTNID--------RLDFKLTFMADFQKYIDKLKQTVP 141 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249 VI GD+N + +D I + + Sbjct: 142 NLVICGDYNICHEAIDIHDPVRNATVSGFLPVEREWLDKFMKSGFIDSFRYFHKEPHQYS 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY ++ + + + SDHCPI + Sbjct: 202 WWSYRANARNNNKGWRIDYHLVSTPLENRMERALIL-----------PEAKHSDHCPIVL 250 Query: 301 DY 302 + Sbjct: 251 EI 252 >gi|310790394|gb|EFQ25927.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola M1.001] Length = 307 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 40/324 (12%), Positives = 76/324 (23%), Gaps = 41/324 (12%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK---------RTT 51 M K +L + + +R++S+NI + R Sbjct: 1 MQLKTLLVPFVLAEAVLS-QSVPIRIMSFNIRYATSSLESGEKPWWDLFCGITKSRCRQR 59 Query: 52 SDYTLLRQYAKNLDAD---IVFLQEMGSYNAVAKVFP-KNTWCIFYSTERLINHSKRDSN 107 + A A IV LQE + + W + S Sbjct: 60 YVLEAISDAANAAPAGAAVIVGLQEALNNQKDDIQNGLGDGWSHLGVGRDDGKKAGEFSV 119 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLK 165 P + + R + E GK+ + HL Sbjct: 120 IFYRNDALRLLYQETKWLSPTPDV-VSYGWGAGSRRIVTIGVFEHIATGKRFIHANTHL- 177 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDD 223 + S S+ + + I + + P + GDFN N Sbjct: 178 -----------DNVSDQARSEGIKVVVSRIQAVQSTYGPLGVTLTGDFNSDPNGSAYRVL 226 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKN---LRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 + + + + ID+ + + + Sbjct: 227 ANGGFVEDLYNKAPRVGSLTGTYTTFDTSLQNSASRIDFIWLGPQSANKYSVQKIEIKS- 285 Query: 281 NEDDIKSRGKRLSDHCPIS--IDY 302 + G +SDH P+ + Sbjct: 286 ----NIASGVVISDHRPVVGDVTL 305 >gi|298370237|ref|ZP_06981553.1| exodeoxyribonuclease III [Neisseria sp. oral taxon 014 str. F0314] gi|298281697|gb|EFI23186.1| exodeoxyribonuclease III [Neisseria sp. oral taxon 014 str. F0314] Length = 258 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 80/306 (26%), Gaps = 76/306 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S N+N + + +Y ADIV +QE+ + A Sbjct: 2 LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 KN + ++ +AV K +G R Sbjct: 47 DMKNPHGMHGHWHCAEKRG--------YSGVAVYSKRAP----DNVQIGMGIEEFDREGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + K+ V+ ++L S + L + + K Sbjct: 95 F-----VRCDFGKLSVISLYLPSGTSAPERQ-------ELKYRFLDAFYPMLEAMKAEGR 142 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 V+ GD+N + + I + Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGRVIRDLGWTDMWRTLYPDNP-G 201 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 N+ IDY ++ + + ++ SDH P+ Sbjct: 202 YTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPL 250 Query: 299 SIDYDF 304 ++YD+ Sbjct: 251 VVEYDY 256 >gi|302868995|ref|YP_003837632.1| endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca ATCC 27029] gi|315504534|ref|YP_004083421.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. L5] gi|302571854|gb|ADL48056.1| Endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca ATCC 27029] gi|315411153|gb|ADU09270.1| Endonuclease/exonuclease/phosphatase [Micromonospora sp. L5] Length = 232 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 83/280 (29%), Gaps = 59/280 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+VS+NI+ D L + + D+V +QE + Sbjct: 7 PLRVVSYNIH----------------SQRDDTAALAEVVRTAAPDVVIVQE-----GPRR 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + ++ + + ++R + V Q YPL + Sbjct: 46 FRWRQKTAALAESFGMVVAAGGLPSLGNVLLTSLRLRVVDTSCQRYPLTPGRHM------ 99 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R A + G + + HL S + QA K + S Sbjct: 100 RGAAYAHCRVGGVDVLLAGSHL-------------STDPAERPAQAAAFKREL---AAST 143 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 +P V D N + W+T+ + + + ID + Sbjct: 144 LPVVAGADINEGPDGP-----AWQTL-AEGLTDTALAADRADRHTFSCADPRRRIDALFV 197 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D + + Y+ D + +R SDH P+ +D Sbjct: 198 DPR---------ITVVDYDVVDTPA-ARRASDHFPVLVDL 227 >gi|255530789|ref|YP_003091161.1| exodeoxyribonuclease III Xth [Pedobacter heparinus DSM 2366] gi|255343773|gb|ACU03099.1| exodeoxyribonuclease III Xth [Pedobacter heparinus DSM 2366] Length = 264 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 77/304 (25%), Gaps = 74/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 +++ S+NIN ++ + L ++ K D+V LQE+ A Sbjct: 1 MKIASYNINGIN----------------ARLDNLLRWLKEARPDVVCLQELKAPDNRFPA 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + + +A+ + + + L G + Sbjct: 45 QLLLDAGYHAIWH------------GQKSWNGVAILSRYAEIKETRRGLEGDPEDLHSRY 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E + + ++L + + Y + L + Sbjct: 93 --------IEAFINGVVIGCLYLPNGNPFPGPKFEYK------LNWIKRLTKHAAKLNAF 138 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 +P + GD+N L W + F K Sbjct: 139 GLPVALVGDYNIIPTDLDTYKPEKYLENALFRPEARKLWTALLKQGWTDAFRKLYPKDRI 198 Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +D+F+++ L D SDH P+ Sbjct: 199 YTFWDYLRNAYHRDAGLRLDHFLLNDKLVDRLDAAGV-------DKHVRGWDHSSDHAPV 251 Query: 299 SIDY 302 + Sbjct: 252 WVVL 255 >gi|188585577|ref|YP_001917122.1| exodeoxyribonuclease III [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350264|gb|ACB84534.1| exodeoxyribonuclease III [Natranaerobius thermophilus JW/NM-WN-LF] Length = 251 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 75/303 (24%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L +Y + DI +QE Sbjct: 1 MKLISWNVNGLRACLKKGF---------------LEYFNEVSGDIFCVQETKLQEG-QID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + Q G ++ R Sbjct: 45 LELPGYFQYWNYAEKKGY----------SGTAIFTKIQPLTVQ----YGIGEAKHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++++++ + + + L +S Sbjct: 91 -----VITLEFCDYYLVNVYTPNSQRELARLDYRLQWEDAFKNYLVNL--------DSEK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + F A Sbjct: 138 PVIVCGDLNVAHKEIDLKNPKNNKRNAGFTEEERNKLTELLNAGFIDTFRYFYPDTEGAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ Q +L SDHCP++ Sbjct: 198 TWWSYITKARERNAGWRIDYFLASQKLDNWLTDAEIH-----------ADIMGSDHCPVA 246 Query: 300 IDY 302 + Sbjct: 247 LKL 249 >gi|109127402|ref|XP_001095110.1| PREDICTED: deoxyribonuclease-1 [Macaca mulatta] Length = 282 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 37/283 (13%), Positives = 86/283 (30%), Gaps = 30/283 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AV 80 +++ ++NI T E + + + Q DI +QE+ + AV Sbjct: 22 SLKIAAFNIQTFGET---------KMSNATLVSYIVQILSRY--DIALVQEVRDSHLTAV 70 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K+ + +++ ++ R V V+ Y G + + Sbjct: 71 GKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSVVDSYYYDDGCEPCGNDT 130 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +R + ++ I D++ + L Q +W Sbjct: 131 FSREPAIVRFSCPFTEVREFAIVPLHAAPEDAVAEIDALYDVYLDVQDKW---------- 180 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 L ++ GDFN +Y+ + + + + + + + D Sbjct: 181 GLEDVMLMGDFNAGCSYVRPSQWSSIRLRTSPTFQWLIPDTADTTATSTHCAY----DRI 236 Query: 261 VMDQNAY-KFLIQESFSEILYNEDDIKSR--GKRLSDHCPISI 300 V+ ++ +S + S + +SDH P+ + Sbjct: 237 VVAGTLLQDAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEV 279 >gi|218676698|ref|YP_002395517.1| hypothetical protein VS_II0936 [Vibrio splendidus LGP32] gi|218324966|emb|CAV26802.1| Conserved hypothetical protein [Vibrio splendidus LGP32] Length = 347 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 41/336 (12%), Positives = 90/336 (26%), Gaps = 59/336 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + ++N+ E S + + + ++LD D++ QE+ S ++ Sbjct: 7 ITFATFNLLNYLEPPNAYYDFENIYSFEEWQKKQHWMAEAIRSLDCDVIGFQEIFSPKSL 66 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137 ++ K + +++ + IA R V + L Sbjct: 67 EQLMNKLGYP-YFAVVDSADVEDDYLYTSPVVGIASRYPIENVQPVTPDSELLSAFNLGD 125 Query: 138 SRAGNRRAVELLVEING---------------------KKIWVLDIHLKSFCFLDSLENT 176 + NR V + + + I V + D+L Sbjct: 126 KFSFNRTPVHATITLPHLGSTDCYVVHLKSQRPTEPRIESIDVDNAQQGEKPQSDTLTRF 185 Query: 177 YSP------SCSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTI 228 + S +AQ L +I + ++ P V+ GDFN+ + + Sbjct: 186 HQEQLGSWLSSVQRGLEAQMLHQYITNHRYQTDQPVVLMGDFNKPLFNDEFKGLLSYSIN 245 Query: 229 DPNDSLIRFPKEKDSRCN-----------------ANKNLRNKIPIDYFVMDQNAYKFLI 271 +S + + + +DY +M Sbjct: 246 RDENSKHWLSHFRLKDSWDIYHQLHEQDLLEQRKPTHYYGASGSVLDYILMSNEFDCQNS 305 Query: 272 QESFSEILYNEDD------IKSRGKRLSDHCPISID 301 Y D + +DH +++ Sbjct: 306 SSLMEISRYTVLDHHLINPSFEHDQFSTDHAIVAVT 341 >gi|323357077|ref|YP_004223473.1| exonuclease III [Microbacterium testaceum StLB037] gi|323273448|dbj|BAJ73593.1| exonuclease III [Microbacterium testaceum StLB037] Length = 282 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 86/323 (26%), Gaps = 85/323 (26%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A+ VR+VS N+N + + + ++ + ADIV LQE+ + A Sbjct: 2 ARSVRIVSINVNGIRA---------------AVRKGMVEWLEASGADIVTLQEVRAT-AE 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 W I +A+ + V +++ D+ R Sbjct: 46 QLAEALPGWRIVNDEALQKG----------RAGVAIISRLPGVETRTHLGPEPLDASGRW 95 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +E +I+G+ + ++ ++ S ++ ++ + K Sbjct: 96 -----IETDFDIDGETVTIVSAYVHSGEVDTPKQDAK-------WLFLDAMEQRLATLKA 143 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPN----------------------------- 231 ++ GD N L + + Sbjct: 144 ERELALVTGDLNVGHRELDIKNWRGNRKNAGFLPRERAYFDRFFGPAGEQVEGVDGSVGT 203 Query: 232 --DSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILY 280 + + + IDY V + Y Sbjct: 204 GLGWVDVGRRRMGEVEGPYTFWSMRGKAFDTDSGWRIDYHVATPALAER-------VTDY 256 Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303 D S R SDH P+ +DY Sbjct: 257 RVDRAPSYDTRWSDHSPVIVDYT 279 >gi|319781575|ref|YP_004141051.1| endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167463|gb|ADV11001.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 300 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 45/316 (14%), Positives = 86/316 (27%), Gaps = 60/316 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 ++LVS+NI +G D + + AD++ LQE+ Sbjct: 1 MKLVSYNIQYGFGGDGCY-----------DLSRAARIVA--GADVIALQEVERHWQRSNF 47 Query: 75 -GSYNAVAKVFPKNTWCI--FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 ++ + P W + + H R N V K V + + L Sbjct: 48 DDQPELLSSLLPDYHWVYGPAFDMDASERHDGRLVNRRRQFGTMVLSKLPIVWSRLHALP 107 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA--- 188 + A+E ++ + VL +HL + LE + Sbjct: 108 MRRTLRPLNTRNAALECMIRTPAGPVRVLSLHLAHIAAEERLEQIDYLLAEHRRAPSDGG 167 Query: 189 -------QWLKDWITQKKESLVPF--VIAGDFNRKINYLGNNDDFWK------------T 227 + ++W + + E P + GDFN + Sbjct: 168 PWSGVDDEPTRNWTSGEAEPENPLAAIWMGDFNMEPGSAEYRRIVGSTPYHRGAAYHSGF 227 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 +D + + K +D+ + + Sbjct: 228 VDAAAVAGEPVPDFHTHVKTIDGRLAKRRLDHCFVGGMFAGRVRSIRADI---------- 277 Query: 288 RGKRLSDHCPISIDYD 303 + SDH P+ +D D Sbjct: 278 -DEVASDHFPLRVDID 292 >gi|301618038|ref|XP_002938432.1| PREDICTED: deoxyribonuclease gamma-like [Xenopus (Silurana) tropicalis] Length = 269 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 89/286 (31%), Gaps = 33/286 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81 +++ S+N + K S + ++ T + DI+ + E+ A Sbjct: 1 MKIASFNARRFG------VKKCSDPKVSAVITKIAA-----RYDIIVILEVFDAKEKAAK 49 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K+ + C +++ R++ V+V +Y + + Sbjct: 50 KLVEQLNSCSDERYNYILSTPLGRKEYKEQYLFVYREEQVKVKD-TYQYEDMQHGDEDSF 108 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + E + + DS Q+ L D KE Sbjct: 109 AREPFIVRFEAKKSALKDFVLIPIHTTPKDS------------VQEIDELYDVYEHVKEK 156 Query: 202 --LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 ++ GDFN Y+ N + + L + N + D Sbjct: 157 WGTENIILLGDFNADGAYVSNKKMKTIRLRTDPDLHWLIDDDTDTTAINTTDFS---YDR 213 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYD 303 V+ + K ++ S + E+ S + + SDH P+ ++++ Sbjct: 214 IVVHSSILKHVVPNSAKPFNFQEEYKMSYEEAVAVSDHYPVEVEFN 259 >gi|115450953|ref|NP_001049077.1| Os03g0166800 [Oryza sativa Japonica Group] gi|108706369|gb|ABF94164.1| Endonuclease/Exonuclease/phosphatase family protein, expressed [Oryza sativa Japonica Group] gi|108706370|gb|ABF94165.1| Endonuclease/Exonuclease/phosphatase family protein, expressed [Oryza sativa Japonica Group] gi|113547548|dbj|BAF10991.1| Os03g0166800 [Oryza sativa Japonica Group] gi|125585049|gb|EAZ25713.1| hypothetical protein OsJ_09546 [Oryza sativa Japonica Group] Length = 607 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 43/346 (12%), Positives = 85/346 (24%), Gaps = 65/346 (18%) Query: 22 QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-- 77 ++S+NI +T + + S L + ADI+ LQE+ S Sbjct: 254 GTFTVLSYNILADTYATSDTYSYCPTWALSWPYRRQNLLREIIGYHADIICLQEVQSNHF 313 Query: 78 -NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL----LG 132 A K+ + + ++ + D R K V + Sbjct: 314 EEFFAPELDKHGYQALFKKRTTEVYTGNLQSIDGCATFFRRDKFSHVKKYEVEFNKAAQS 373 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLD------------IHLKSFCFLDSLENTYSPS 180 D+ A R+ + + + + + C ++ N + Sbjct: 374 LTDAIIPAAQRKVALTRLIKDNIALIAVLEAKFGSHGADNPSKRQLLCVANTHINVHQDL 433 Query: 181 CSLLSQQAQWLKDWITQKK-ESLVPFVIAGDFNRKINYLGNN------------------ 221 + Q L + + + +P ++ GDFN + Sbjct: 434 KDVKLWQVNTLLKGLEKIAVSADIPMLVCGDFNATPGSTPHGLLAMGKVDLMHPDLAIDP 493 Query: 222 ------------------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 D R + N I Sbjct: 494 LGILRPASKLTHQLPLVSAYSSFARMVGAGYDLEHQRRRMDPATNEPLFTNCTRDFTGTI 553 Query: 258 DYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 DY + + E E +D + SDH + ++ Sbjct: 554 DYIFYTADSLSVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEF 599 >gi|88803294|ref|ZP_01118820.1| hypothetical protein PI23P_11917 [Polaribacter irgensii 23-P] gi|88780860|gb|EAR12039.1| hypothetical protein PI23P_11917 [Polaribacter irgensii 23-P] Length = 336 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 40/324 (12%), Positives = 97/324 (29%), Gaps = 71/324 (21%) Query: 1 MIRKYVLALVFFLVP------------CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK 48 + ++++L+ + + +++ ++++S+N+ T +N+ Sbjct: 64 LKKQFLLSFLVLIFGWFFASPLYKISENASALNSDLKVMSFNVKTFDFFNNKKKVENTKN 123 Query: 49 RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108 + + DI+ LQE + + + + + Sbjct: 124 GFE--------FIADQALDILVLQE--------------YYQLKKNKLPYPYRYIKLRSK 161 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 +A+ K + S L ++ + + I + + H +S Sbjct: 162 RSKYGMAIYSKYKIINSGSLDLKSTGNN--------IIFADILKEKDTIRIYNAHFESLK 213 Query: 169 FLDSLENTYSPS--------CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 + EN + +QA ++ +K+ +I GDFN Sbjct: 214 IKPNEENFGEENSEKLIGRVAQAFKRQASQTALFLNHEKQWKGKKIICGDFNNTA----- 268 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 + I N + N + ID+ + D+ A Sbjct: 269 YSWMYHEISKNK--KDAFIVAGEGFGKSYNYWFPLRIDFILTDEAAI------------- 313 Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304 + K+ + SDH PI + ++ Sbjct: 314 -INQFKTFTEIYSDHFPIRANINW 336 >gi|291439108|ref|ZP_06578498.1| exodeoxyribonuclease [Streptomyces ghanaensis ATCC 14672] gi|291342003|gb|EFE68959.1| exodeoxyribonuclease [Streptomyces ghanaensis ATCC 14672] Length = 273 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 32/309 (10%), Positives = 76/309 (24%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 + + S N+N L ++ AD + LQE+ Sbjct: 9 LTVTSVNVNGLRAAAKKGF---------------VEWLAQTPADALCLQEVRAEPQQLPE 53 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +V W + ++ + +++ + Q D R Sbjct: 54 QVREPEGWHVVHAP----------AAAKGRAGVSLYTRREPDRVQVGFGSTEFDGSGR-- 101 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++ G + V ++L S + + L++ Sbjct: 102 -----YVEADLPG--VTVASLYLPSGEVGTERQEEKVRFMGEFLAYLKELRERA---AGE 151 Query: 202 LVPFVIAGDFNRKIN----------------YLGNNDDFWKTI--DPNDSLIRFPKEKDS 243 V+ GD+N + + + + K Sbjct: 152 GREVVVCGDWNIAHEKADLKNWRGNTKNSGFLPEEREWLSRVLTPTDGGYVDVVRKLHPD 211 Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + IDY + + + + + +R SD Sbjct: 212 VDGPYSWWSYRGRAFDNDTGWRIDYQMATPGLAERAV-------EAYVERAATHAERWSD 264 Query: 295 HCPISIDYD 303 H P+++ ++ Sbjct: 265 HAPVTVVFE 273 >gi|240127208|ref|ZP_04739869.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae SK-93-1035] gi|268685568|ref|ZP_06152430.1| exodeoxyribonuclease [Neisseria gonorrhoeae SK-93-1035] gi|268625852|gb|EEZ58252.1| exodeoxyribonuclease [Neisseria gonorrhoeae SK-93-1035] Length = 259 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S N+N + + +Y ADIV +QE+ + A Sbjct: 2 LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 KN + ++ +AV K +G R Sbjct: 47 DMKNPHGMHGHWHCAEKRG--------YSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + ++ V+ ++L S + + + + + K Sbjct: 95 F-----VRCDFGRLGVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNEGR 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248 V+ GD+N + + + + Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVMHTLGWTDMWRTLYPDVPGY 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY ++ + + ++ SDH P+ Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 251 Query: 300 IDYDF 304 ++YD+ Sbjct: 252 VEYDY 256 >gi|239930740|ref|ZP_04687693.1| exodeoxyribonuclease [Streptomyces ghanaensis ATCC 14672] Length = 266 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 32/309 (10%), Positives = 76/309 (24%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 + + S N+N L ++ AD + LQE+ Sbjct: 2 LTVTSVNVNGLRAAAKKGF---------------VEWLAQTPADALCLQEVRAEPQQLPE 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +V W + ++ + +++ + Q D R Sbjct: 47 QVREPEGWHVVHAP----------AAAKGRAGVSLYTRREPDRVQVGFGSTEFDGSGR-- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++ G + V ++L S + + L++ Sbjct: 95 -----YVEADLPG--VTVASLYLPSGEVGTERQEEKVRFMGEFLAYLKELRERA---AGE 144 Query: 202 LVPFVIAGDFNRKIN----------------YLGNNDDFWKTI--DPNDSLIRFPKEKDS 243 V+ GD+N + + + + K Sbjct: 145 GREVVVCGDWNIAHEKADLKNWRGNTKNSGFLPEEREWLSRVLTPTDGGYVDVVRKLHPD 204 Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + IDY + + + + + +R SD Sbjct: 205 VDGPYSWWSYRGRAFDNDTGWRIDYQMATPGLAERAV-------EAYVERAATHAERWSD 257 Query: 295 HCPISIDYD 303 H P+++ ++ Sbjct: 258 HAPVTVVFE 266 >gi|225706090|gb|ACO08891.1| Deoxyribonuclease-1 precursor [Osmerus mordax] Length = 287 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 94/308 (30%), Gaps = 30/308 (9%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M + L V L ++ +RL ++NI + + T+ ++ Sbjct: 1 MTTRMHLVCVAGLFLALLAMGGSLRLGAFNIKSFG---------DKKASNTTLMDIISTI 51 Query: 61 AKNLDADIVFLQEMGSYNAVA---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 DI+ +QE+ + A + N Y + +++ S R Sbjct: 52 VHRY--DIILIQEVRDTDLSATNILMQHVNKGPSPYKYQHIVSEPLGRSTYTERYLYLYR 109 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + V V + G + + R ++ + + + +L+ Sbjct: 110 QDLVSVAKNYTYDDGCEPCGTDTFIREPFVVMFSSKYTAVENFVLIPQHTSPDFALQEVD 169 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + + +W + ++ GDFN +Y+ +++ + + S Sbjct: 170 ALYDVAADVRVRW----------NTNDIILLGDFNAGCSYVTSSEWVKIRLFTDKSYHWL 219 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--GKRLSDH 295 + +N D V + + L S Y E S +SDH Sbjct: 220 ITDDVDTTVSNTVCPY----DRIVATTDMMRGLATGSARVFNYMEALKLSHSLALGVSDH 275 Query: 296 CPISIDYD 303 P+ ++ Sbjct: 276 YPVEVELT 283 >gi|73670429|ref|YP_306444.1| hypothetical protein Mbar_A2969 [Methanosarcina barkeri str. Fusaro] gi|72397591|gb|AAZ71864.1| hypothetical protein Mbar_A2969 [Methanosarcina barkeri str. Fusaro] Length = 278 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 40/292 (13%), Positives = 82/292 (28%), Gaps = 40/292 (13%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 S + +R+ ++NI L + + DIV +QE+ + Sbjct: 16 SQEETLRIGAFNIQVFGV---------KKASNPKIMNTLAKVLRTY--DIVAVQEIRDSS 64 Query: 79 -----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 A+ KV Y + +++ A V++ + P + Sbjct: 65 QTALPALIKVVNSERANYSYVVSERLGR----TSSKEQYAYIYDSDRVKLEGE--PYTYS 118 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 K + +R+ E + + ++ I + + + E + D Sbjct: 119 KPEGTDPFHRQPYIATFEDRNETLNLVLITVHTDPDEATEEINS----------LSTVLD 168 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 Q FVI GD N +Y N + N Sbjct: 169 STRQTCPVEDNFVIMGDLNADGSYFDENKA---NSLSCGEYCWLIDNSMDTTTGDTNCTY 225 Query: 254 KIPIDYFVMDQNAYKFLIQES-FSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D ++ ++ + S + +SDH P+ ++ F Sbjct: 226 ----DRIIITEDMESYFTGNSGLFRYDLKYNLTSEETNAVSDHYPVYAEFAF 273 >gi|15928480|gb|AAH14718.1| Deoxyribonuclease I [Mus musculus] Length = 284 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 34/289 (11%), Positives = 86/289 (29%), Gaps = 34/289 (11%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +R+ ++NI T E + + + + DI +QE+ + V Sbjct: 20 AGTLRIAAFNIRTFGETKMSNATLSVY---------FVKILSRY--DIAVIQEVRDSHLV 68 Query: 81 A--KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 A K+ + + +++ + R V +L G + + Sbjct: 69 AVGKLLDELNRDKPDTYRYVVSEPLGRKSYKEQYLFVYRPDQVSILDSYQYDDGCEPCGN 128 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD-WITQ 197 +R + ++ I + + + L D ++ Sbjct: 129 DTFSREPAIVKFFSPYTEVQEFAIVPLH------------AAPTEAVSEIDALYDVYLDV 176 Query: 198 KKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 ++ + GDFN +Y+ ++ + + + + + Sbjct: 177 WQKWGLEDIMFMGDFNAGCSYVTSSQWSSIRLRTSPIFQWLIPDSADTTVTSTHCAY--- 233 Query: 257 IDYFVMDQNAYK-FLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302 D V+ + ++ S + + S + +SDH P+ + Sbjct: 234 -DRIVVAGALLQAAVVPNSAVPFDFQAEYRLSNQLAEAISDHYPVEVTL 281 >gi|317178229|dbj|BAJ56018.1| exodeoxyribonuclease [Helicobacter pylori F16] Length = 250 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 81/303 (26%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++DAD+ +QE + + + Sbjct: 1 MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + G R Sbjct: 42 QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVS----YGINMEEHNKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + ++++++ + S + + + L+ Sbjct: 91 -----VVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|167535651|ref|XP_001749499.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772127|gb|EDQ85784.1| predicted protein [Monosiga brevicollis MX1] Length = 989 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 93/308 (30%), Gaps = 50/308 (16%) Query: 21 AQKVRLVSWNI-------NTLSEQE----GVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 A+ +R++S+N+ L+ E + + ++ + AD++ Sbjct: 597 AETIRILSYNVLADCYIREDLARPEVRAASFPGKDDQCLLWKHRWPRIQSVVRRSKADVI 656 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 LQE+ Y V+ + + + KRD ++ + A +R + V+ + Sbjct: 657 CLQEVE-YAMFEHVYCPFMRRQGFDICIMQDAPKRDVSHPVGVATFLRGERFSVVSAQHR 715 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + L ++ G + V + HL S + + +Q + Sbjct: 716 SRA-----------LLLHLQDQLTGHSVAVGNCHLIS----------KRSAEADRIKQMR 754 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW--KTIDP-----------NDSLIR 236 + V+ GDFN + ++ + L+ Sbjct: 755 NVVRLAEGM--GTTAVVLVGDFNDGDEDPSVAQSLQCVRKLEDPVAAKAMVAAESAQLLL 812 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE--DDIKSRGKRLSD 294 + S ID+ ++ N + Y + SD Sbjct: 813 HSVYEGSPDVTLCKPGLMARIDHVLVTSNCLVEARHAPQATESYGTLSKHRLPSRRNGSD 872 Query: 295 HCPISIDY 302 H P+ +D+ Sbjct: 873 HLPVGMDF 880 >gi|25027653|ref|NP_737707.1| hypothetical protein CE1097 [Corynebacterium efficiens YS-314] gi|259506945|ref|ZP_05749845.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|23492935|dbj|BAC17907.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259165483|gb|EEW50037.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 292 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 39/282 (13%), Positives = 76/282 (26%), Gaps = 37/282 (13%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 + +++WNI + + R + L+R+ L I+ +QE + Sbjct: 23 LHVMTWNIR----RRIPGQLTHRADRWATRAPLIREALSQLRPTILGVQEALPEQTAFLQ 78 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +V + F R +H+ + T + P + S+ Sbjct: 79 QVLGPS--HRFVGWGRGRHHTGEATPVFYDTTQLELIDWRQQALSDTPEVPGSVSWGNLF 136 Query: 142 NRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R V G + V + HL L + + + + Q Sbjct: 137 PRAFVAATFRHRATGTRFLVFNTHLDPLSRRSRLRSARAIRDHIRTTQL----------- 185 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNANKNLRNKI--P 256 P V+ GD N N + S+ + N Sbjct: 186 ----PAVVTGDVNAHQNSATFRAFTSGNVLTDTWSVAAGHLTAEWGTFPNYRAPRPGGKR 241 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ID+ + + + + + G SDH + Sbjct: 242 IDWILSTPD---------WQVHRAGINARQYAGAWASDHLSV 274 >gi|326433914|gb|EGD79484.1| hypothetical protein PTSG_12983 [Salpingoeca sp. ATCC 50818] Length = 504 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 33/315 (10%), Positives = 76/315 (24%), Gaps = 38/315 (12%) Query: 22 QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 KV + +NI + + + + + N DI+ LQE+ Sbjct: 190 DKVSVFCYNILCDKYASRNMFKYCPSWALAWEYRKGKILTELANSKCDILCLQEVSKSEF 249 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK------------KNVRVLQQS 127 + ++ ++ + ++ I ++ + Sbjct: 250 YQYFLGQLQKEGYHGAFKVKTRAAYQADETIDGCATFYSTKTYKMLYEHGIDLQQLSVAN 309 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 + A+ + E K V +L + + Sbjct: 310 SNGCNTVIDRCMPKDNVALFTVFEHAVTKKRVFVANLHLTWDPHFSDVK----VVQIVLA 365 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN-------------------NDDFWKTI 228 + +++++ + K VP ++ GDFN + F+ ++ Sbjct: 366 LKAIREFLQENKLLDVPVMLMGDFNSMPDSGVYEFLATGKINPNHPDMQGYDYKAFFDSV 425 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKS 287 NK IDY + + E + Sbjct: 426 GTTHPFKLRSAYTTEMQYTNKTAGFVGIIDYIWYTEGSLLPQAVWGPVDESYMDRVSGCP 485 Query: 288 RGKRLSDHCPISIDY 302 SDH + Sbjct: 486 NPHFSSDHLALGAKL 500 >gi|260433467|ref|ZP_05787438.1| endonuclease/exonuclease/phosphatase family protein [Silicibacter lacuscaerulensis ITI-1157] gi|260417295|gb|EEX10554.1| endonuclease/exonuclease/phosphatase family protein [Silicibacter lacuscaerulensis ITI-1157] Length = 234 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 45/280 (16%), Positives = 83/280 (29%), Gaps = 55/280 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+RL S+NI + + Q L ADIV LQE + Sbjct: 6 KLRLASYNIQKCVGLD-----------LRRQPQRILQVLDRLGADIVVLQEADKR-LPPR 53 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + ++++ S A+ R ++RV + ++ L Sbjct: 54 PAALPHFMLDEAGWKIVDLGGAGSLGWHGNAVIWRGDHIRVRRAAHHDLPG------LEP 107 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R AV + + + + V+ +HL F + QQ L+ + Sbjct: 108 RGAVRVEFDTHIGPLRVMGMHLGLFS-------------AWRRQQILHLRR--DGRALDR 152 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 +P V AGDFN + + P+ + + + +D + Sbjct: 153 MPTVWAGDFN-----EWSRQPILDRLAPDMRFL-------PPVPSFPAAQPLGALDRIAL 200 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + SDH P+ D Sbjct: 201 GGGLEALAHGV----------HGERPAHIASDHLPVWADL 230 >gi|186474317|ref|YP_001861659.1| exodeoxyribonuclease III Xth [Burkholderia phymatum STM815] gi|184196649|gb|ACC74613.1| exodeoxyribonuclease III Xth [Burkholderia phymatum STM815] Length = 308 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 89/304 (29%), Gaps = 72/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L ++NIN S L Q+ + D+V LQE+ + ++ Sbjct: 1 MKLATFNING----------------IRSRLPALLQWLEREAPDVVCLQELKAPDS---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ K+ + ++ L G D +R Sbjct: 41 ------GFPEAELNRAGYGAIWHGQVSWNGVAILAKDAQPVETRRGLPGDPDDTH---SR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + I + ++L + + Y + + L + + +S Sbjct: 92 YIEAAV-----EGILIGCLYLPNGNPQPGPKFDYKLA------WFERLIVYAKRLLDSGH 140 Query: 204 PFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNA 247 P V+AGD+N + + + +D + + D + Sbjct: 141 PVVLAGDYNVVPTDFDIYNPRSWLKDALLQPESRACYARLLDQGWTDALRTRFPDEQIFT 200 Query: 248 NKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++++ + D SDH P Sbjct: 201 F-WDYFRQHWERNSGLRIDHLLLNRPVAAMMRDAGV-------DRWVRGEPHASDHAPAW 252 Query: 300 IDYD 303 ++ D Sbjct: 253 VELD 256 >gi|116328809|ref|YP_798529.1| metal-dependent hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331719|ref|YP_801437.1| metal-dependent hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116121553|gb|ABJ79596.1| Metal-dependent hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125408|gb|ABJ76679.1| Metal-dependent hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 362 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 91/324 (28%), Gaps = 66/324 (20%) Query: 20 VAQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 K++L+ WN+ L+ + S + + Y ++ D++ Sbjct: 48 ADSKIKLLVWNVQYLAGKKRVFWYDLPEGDGPDVGPSREEIEETLKKVTDYIRSESPDVI 107 Query: 70 FLQEMGS-------YNAVAKVFPKNTWCI------FYSTERLINHSKRDSNNDIHTAIAV 116 QE+ + + ++ + FY + H K + + A Sbjct: 108 LFQELHDGSKNTFEEDQLERILSQIGPAYMCKSEAFYWKSFFVPHPKIWGSVGMKLATVS 167 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGN-RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLE 174 + K ++ S PL+ A ++ R ++ + I G K VL+ HL +F Sbjct: 168 KYKISDGIRHSLPLMPADPISTQFNLKRAILQNDLPIEGGDKFTVLNTHLDAFSQGTDTM 227 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI----------------NYL 218 Q + + + + + +V+ GDFN + Sbjct: 228 RR----------QVETIAGLLKELDLAGHYWVLGGDFNLLPPGFDRKLMHPNGAFFYSDE 277 Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQE 273 + + IDY N Sbjct: 278 QEIKPLFDRWSSAVPFNILNGVGREKYYTYYPNDPAIGKPDRTIDYIFYSSNL------- 330 Query: 274 SFSEILYNEDDIKSRGKRLSDHCP 297 + Y D ++ +SDH P Sbjct: 331 --KQTEYKVDQGETLW-TISDHFP 351 >gi|289766976|ref|ZP_06526354.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|289697175|gb|EFD64604.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 294 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 33/285 (11%), Positives = 73/285 (25%), Gaps = 61/285 (21%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA--- 81 R+++WN+ S+ ++ +QE + + Sbjct: 63 RVMTWNLCN--------------PCDASNLDRAAD-IAAHAPQVIGMQEACARDVDRIRD 107 Query: 82 --KVFPKNTWCIFY-STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + F + + + S + + N A+ + Sbjct: 108 YLEAFHGLVYHVAHGSVLQNWSRCGGAPWNPGGFGQAILSAAPITDAVNVEYPDGG---- 163 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + +R + + E+ G+ + V + HL + Q + L + + Sbjct: 164 -SEDRGYLAVTTEVGGRSVRVFNTHL-----------AQRRQEEFRTDQVRVLAKEVARH 211 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + + ++ GDFN D W D C + + D Sbjct: 212 ERA----IVVGDFNAVP-EASELDPMWSLATDTDPQCHPAPG--GTCEPTTDWQ--SKFD 262 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 Y + + + SDH + D D Sbjct: 263 YVFLRG-----VAPREHRVVRTAH----------SDHDLLYADLD 292 >gi|109731864|gb|AAI15571.1| Deoxyribonuclease I [Mus musculus] Length = 283 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 33/288 (11%), Positives = 86/288 (29%), Gaps = 33/288 (11%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +R+ ++NI T E + + + + DI +QE+ + V Sbjct: 20 AGTLRIAAFNIRTFGETKMSNATLSVY---------FVKILSRY--DIAVIQEVRDSHLV 68 Query: 81 A--KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 A K+ + + +++ + R V +L G + + Sbjct: 69 AVGKLLDELNRDKPDTYRYVVSEPLGRKSYKEQYLFVYRPDQVSILDSYQYDDGCEPCGN 128 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD-WITQ 197 +R + ++ I + + + L D ++ Sbjct: 129 DTFSREPAIVKFFSPYTEVQEFAIVPLH------------AAPTEAVSEIDALYDVYLDV 176 Query: 198 KKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 ++ + GDFN +Y+ ++ + + + + + Sbjct: 177 WQKWGLEDIMFMGDFNAGCSYVTSSQWSSIRLRTSPIFQWLIPDSADTTVTSTHCAY--- 233 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302 D V+ + + + + + + S + +SDH P+ + Sbjct: 234 -DRIVVAGALLQAAVVPNSAPFDFQAEYGLSNQLAEAISDHYPVEVTL 280 >gi|313892072|ref|ZP_07825670.1| exodeoxyribonuclease III [Dialister microaerophilus UPII 345-E] gi|313119524|gb|EFR42718.1| exodeoxyribonuclease III [Dialister microaerophilus UPII 345-E] Length = 254 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 38/308 (12%), Positives = 81/308 (26%), Gaps = 82/308 (26%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++ +SWN+N L + KNL+AD LQE Sbjct: 2 NNLKYISWNVNGLRACIKKGFLDS---------------FKNLNADCFCLQETKLQPHQI 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + + S ++ A+ K + Sbjct: 47 ELNIPGYYQYWNSAI-----------KKGYSGTALFTKIKPISVS--------------- 80 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE- 200 + +E + ++ ++ ++ + + L + +W D+ + Sbjct: 81 ----YGMNIEEHDQEGRLITAEFENHFLVVCYTPNSQRQLARLEYRMKWENDFKNYLLKL 136 Query: 201 -SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSR 244 P ++ GD N + + T+ N F + Sbjct: 137 TESKPVILCGDLNVAHKEIDLANPSSNHKNAGFTDDERKKFSTLLENGFTDTFRYLYPDK 196 Query: 245 CNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 +A IDYF++ + + SDH Sbjct: 197 KDAYSWWSYFAKSRERNIGWRIDYFLVSDKLKNKIKDAKIH-----------PEIQGSDH 245 Query: 296 CPISIDYD 303 CP+ + +D Sbjct: 246 CPVELTFD 253 >gi|293375717|ref|ZP_06621989.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter sanguinis PC909] gi|292645660|gb|EFF63698.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter sanguinis PC909] Length = 254 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 36/285 (12%), Positives = 78/285 (27%), Gaps = 36/285 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++++V++N+ + + + + + K+ D++ QE+ + ++ Sbjct: 3 NELKIVTFNLR--------ITVDDGLNVWENRVSHVVHKIKSEAPDLIGFQEL-TEISLR 53 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + T +F R S + P Sbjct: 54 DLKRQLTDYVFVGCGRDEQMSGEMVMIAYNKNKLDLMSLDIFWFSDTPYKPGSKKEMMIL 113 Query: 142 NRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + + + + V + + S + Q L D +++ Sbjct: 114 ARPCNVAVFKNQLTNQIFRVYNT-----------HYDHMQSSIRVQSSEQLLNDLHLREQ 162 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 +P +I GD N + I + L + KI IDY Sbjct: 163 NISLPTLIMGDMNSEPQDEEIKAIVNNEIIELNDLTDKLDYTFHD-----YGKIKIKIDY 217 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ G LSDH P+ + F Sbjct: 218 IFATKSVNASKAVAWADCF---------DGVYLSDHYPVMVRVTF 253 >gi|330806705|ref|YP_004351167.1| endonuclease/exonuclease/phosphatase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|253559456|gb|ACT32417.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens] gi|327374813|gb|AEA66163.1| Putative endonuclease/exonuclease/phosphatase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 292 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 39/298 (13%), Positives = 82/298 (27%), Gaps = 58/298 (19%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLD 65 ++ ++RL+S+NI E + + + + K D Sbjct: 22 VMSTGLPGDSRLRLLSFNIQVGISTERYRHYLTRGWQHLLPHTGRAGNLQKIGDLLK--D 79 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVL 124 D+V LQE + + + R+ + V + Sbjct: 80 FDLVALQEADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRNLGRLGQHSNGVLSRLRPWA 139 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + +PL G K R A+ + + V+ +HL Sbjct: 140 IEDHPLPGPKG-------RGAILARFGEGPEALVVVMMHLALG-------------ARTR 179 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + Q ++++ I K V+ GD N + L Sbjct: 180 TMQLAYIRELIGGYKHQ----VLMGDMNTHATD----------LLQTSPLRDLGLLAPQL 225 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + R + +D+ ++ ++ I SDH P++++ Sbjct: 226 EATFPSWRPQRCLDHILLSPTLTLERVEVLAQPI--------------SDHLPVAVEI 269 >gi|170102771|ref|XP_001882601.1| predicted protein [Laccaria bicolor S238N-H82] gi|164642498|gb|EDR06754.1| predicted protein [Laccaria bicolor S238N-H82] Length = 650 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 41/343 (11%), Positives = 91/343 (26%), Gaps = 89/343 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81 +R+++WNIN + W +L+ADI+ QEM S Sbjct: 1 MRILTWNINGVRTLPQYHPWNTLKAHD--------DILNHLEADIICFQEMKSSRPALPK 52 Query: 82 KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVR----------KKNVRVLQQSYPL 130 +V ++ F+S R +S + I ++ K + Sbjct: 53 QVAVPPSYDSFFSFPIRKSGYSGVATYTRHSAVIPLKAEEGLSGVLQPKPPLTAAERISD 112 Query: 131 LGAKDSFSRAGNRRA--VELLVEINGKK-------IWVLDIHLKSFCFLDSLENTYSPSC 181 + + ++ G+ +++++ + + Y Sbjct: 113 SDNYPPNAETASIEGDLDYADLDSEGRTVILDLGLFVLINVYCPNDGNGTEERDKYKMDF 172 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------------------ 217 L L+ + + ++ GD N Sbjct: 173 HRL------LEMRVVGLIKEGREVMVVGDLNACAAIIDHCEGHLMVAKGLAEGLQGEEGF 226 Query: 218 --LGNNDDFWKTIDPND------------SLIRFPKEKDSRCNANK----NLRNKIPIDY 259 + + P D + ++ C K + IDY Sbjct: 227 WGKDSRRWMRGFLVPEDEGMPGGFMIDIVRKLWPERKGMYTCWNTKISARDSNYGTRIDY 286 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + ++ ++ + SDHCP+ +D Sbjct: 287 ILITRGLLPWVKAADIQPLI-----------KGSDHCPVYVDL 318 >gi|6980804|pdb|1DE8|B Chain B, Human ApurinicAPYRIMIDINIC ENDONUCLEASE-1 (Ape1) Bound To Abasic Dna gi|6980805|pdb|1DE8|A Chain A, Human ApurinicAPYRIMIDINIC ENDONUCLEASE-1 (Ape1) Bound To Abasic Dna gi|6980812|pdb|1DE9|A Chain A, Human Ape1 Endonuclease With Bound Abasic Dna And Mn2+ Ion gi|6980813|pdb|1DE9|B Chain B, Human Ape1 Endonuclease With Bound Abasic Dna And Mn2+ Ion Length = 276 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +++ SWN++ L + K DI+ LQE Sbjct: 11 TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 55 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K+ + S + S+ + ++ + + + + G Sbjct: 56 KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 105 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D R V ++ ++ + + + L Sbjct: 106 DEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 158 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 159 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 212 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ + L Sbjct: 213 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 263 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 264 --GSDHCPITL 272 >gi|326402657|ref|YP_004282738.1| exodeoxyribonuclease III [Acidiphilium multivorum AIU301] gi|325049518|dbj|BAJ79856.1| exodeoxyribonuclease III [Acidiphilium multivorum AIU301] Length = 267 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 32/305 (10%), Positives = 73/305 (23%), Gaps = 67/305 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + +WNIN LL DIV LQE + Sbjct: 4 LTVATWNIN----------------SVRLRRDLLHSLMDQAAPDIVCLQE---TKVPDDL 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP++ L + +A+ + + P K Sbjct: 45 FPEDL------GTALGLPHVLKRGMKGYNGVAILSRLPLTAVEDTPDWCMKSDCRH---- 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ + + + ++ + D + +P +D + Sbjct: 95 --IAARIDTGTDPLVLHNFYVPAG--GDIPDRAENPKYGHKLDFIAEARDHFAMNRPHRT 150 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N ++ + + Sbjct: 151 --MLVGDLNIAPLENDVWSHKQLLNVVSHTPPETEGLNAWRTEGFIDAIRHFVPDDQKLF 208 Query: 249 KNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +D+ + + L + + + +R SDH P+ Sbjct: 209 TWWSYRNRDWRASNRGRRLDHIWVSTDLIGNLARHAILQD-------ARDWERGSDHVPV 261 Query: 299 SIDYD 303 + D Sbjct: 262 VLALD 266 >gi|320354858|ref|YP_004196197.1| endonuclease/exonuclease/phosphatase [Desulfobulbus propionicus DSM 2032] gi|320123360|gb|ADW18906.1| Endonuclease/exonuclease/phosphatase [Desulfobulbus propionicus DSM 2032] Length = 243 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 31/292 (10%), Positives = 85/292 (29%), Gaps = 60/292 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRT----TSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +R + +NI + + +++ +R++ +++ D++ L E+ + Sbjct: 1 MRFLLYNIRYAAGHGSRFHFPFPYAGYLRHSHDNFSKIREFIRSVQPDVMGLVEVDGGSF 60 Query: 80 VAK-------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + + + T+ + AV + + + + Sbjct: 61 RTDQLCQAEMLADQLGYYHVIETKYGSASMAKRLPLLKTQGNAVLTRMPIISHRFHYFDE 120 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 L++++ +++ + +HL Q + L Sbjct: 121 -----------GVKRLVIQVCTERLTIFLVHLSLTY-------------RNRQYQLERLY 156 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 I Q P ++AGDFN + ++ + + + Sbjct: 157 KLIRQV---DRPMILAGDFNVL--------WGMRELELFLGATGLISANPEKKPSYPSRA 205 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 K +D+ + + ++ + SDH P+ D+ F Sbjct: 206 PKRELDFILHSPEL---------KVVHFHIPSV-----TYSDHAPLICDFTF 243 >gi|240081821|ref|ZP_04726364.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae FA19] gi|240114099|ref|ZP_04728589.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae MS11] gi|240114662|ref|ZP_04728724.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae PID18] gi|240122497|ref|ZP_04735453.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae PID332] gi|240126654|ref|ZP_04739540.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae SK-92-679] gi|260441531|ref|ZP_05795347.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae DGI2] gi|268597918|ref|ZP_06132085.1| exodeoxyribonuclease [Neisseria gonorrhoeae FA19] gi|268600168|ref|ZP_06134335.1| nuclease [Neisseria gonorrhoeae MS11] gi|268600307|ref|ZP_06134474.1| nuclease [Neisseria gonorrhoeae PID18] gi|268681088|ref|ZP_06147950.1| nuclease [Neisseria gonorrhoeae PID332] gi|268685234|ref|ZP_06152096.1| nuclease [Neisseria gonorrhoeae SK-92-679] gi|291044894|ref|ZP_06570603.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|268551706|gb|EEZ46725.1| exodeoxyribonuclease [Neisseria gonorrhoeae FA19] gi|268584299|gb|EEZ48975.1| nuclease [Neisseria gonorrhoeae MS11] gi|268584438|gb|EEZ49114.1| nuclease [Neisseria gonorrhoeae PID18] gi|268621372|gb|EEZ53772.1| nuclease [Neisseria gonorrhoeae PID332] gi|268625518|gb|EEZ57918.1| nuclease [Neisseria gonorrhoeae SK-92-679] gi|291011788|gb|EFE03784.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] Length = 259 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S N+N + + +Y ADIV +QE+ + A Sbjct: 2 LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 KN + ++ +AV K +G R Sbjct: 47 DMKNPHGMHGHWHCAEKRG--------YSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + ++ V+ ++L S + + + + + K Sbjct: 95 F-----VRCDFGRLGVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNEGR 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248 V+ GD+N + + + + Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHTLGWTDMWRTLYPDVPGY 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY ++ + + ++ SDH P+ Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 251 Query: 300 IDYDF 304 ++YD+ Sbjct: 252 VEYDY 256 >gi|170074079|ref|XP_001870509.1| sphingomyelin phosphodiesterase 2 [Culex quinquefasciatus] gi|167870837|gb|EDS34220.1| sphingomyelin phosphodiesterase 2 [Culex quinquefasciatus] Length = 423 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 43/298 (14%), Positives = 87/298 (29%), Gaps = 40/298 (13%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++ +++ NI + + + + + DIV LQE+ S + Sbjct: 2 ALELSILTLNIWGIPYVSKDRA---------VRVEAIGEVLASGNYDIVSLQEVWSESDY 52 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD----- 135 + + + ++ + +AV K V + Sbjct: 53 RYLKERAAAALPFAHYFYSGVVG--------SGLAVLSKYPIVSAFFHAWSVNGYVHRIQ 104 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 G + + + +N + + V HL + + + + QA +I Sbjct: 105 HGDWFGGKGVGFVKISVNEQLVHVYAAHLHA-----EYDRSCDDYMAHRVIQAYDTAQFI 159 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCN 246 + + V V+AGD N + L D K + + L ++S + Sbjct: 160 ENTQGNGVLQVLAGDLNTEPGDLAYRVLQTCSRLTDSADKKMYASGDLNTNEIARNSYTD 219 Query: 247 A--NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 K IDY + + L D I + SDH + Sbjct: 220 PEAAKKSPKGKRIDYIMYR--FGSHYEGKLLEHRLPLPDRIPGKDISYSDHEAVYAKI 275 >gi|327393209|dbj|BAK10631.1| endonuclease/exonuclease/phosphatase family protein YbhP [Pantoea ananatis AJ13355] Length = 253 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 82/288 (28%), Gaps = 53/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ N + LR+ + ADIV LQE+ + + Sbjct: 9 SFKVLTINTHKGFAPFNRRF----------ILPELREAVRATSADIVLLQEVMGTHDIHP 58 Query: 83 V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P + F + + + + + H AV + Q+ + A Sbjct: 59 LQHENWPNTSHYEFLADTMWNDFAYGRNAVYPEGHHGNAVLSRFPIAEYQNRDVSVAG-- 116 Query: 137 FSRAGNRRAVE--LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + NR + + + + V+ +HL + Q L + Sbjct: 117 ---SENRGMLHCQITLPAPYGTLHVICVHLGLK-------------AAHRRAQMAMLNEM 160 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + P V+AGDFN + F + Sbjct: 161 VLA-LPPDAPVVVAGDFNDWQGRANKILQKGAGLKE-----VFSIKHGRPARTFPARFPL 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D + + + + LSDH P++++ Sbjct: 215 LRLDRIYVRNA-----------TVSHPWALPRKPWSHLSDHAPLAVEI 251 >gi|219122782|ref|XP_002181718.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406994|gb|EEC46932.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 489 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 45/341 (13%), Positives = 94/341 (27%), Gaps = 76/341 (22%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + +R+ SWN+ L S L + + + D++ LQE + Sbjct: 164 SYTMRIASWNVAGLRALMRNSP------------HALSDFVREHNVDVLCLQETKLQESH 211 Query: 81 AK---------VFPKNTWCIFYS-TERLINHSKRDSN-------------NDIHTAIAVR 117 + K + +YS + +S T + Sbjct: 212 LDDPKLKIRGHLLEKEGFDSYYSCSTARKGYSGTSVFVKRRQLIKGSKVAKKQKTLGSYF 271 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN----GKKIWVLDIHLKSF-----C 168 KN S L G ++ + ++N + ++ + SF Sbjct: 272 GKNDERETSSNSLKGTEELSIDPHLLVPEGVSFQMNVDKHDSEGRIVVVDFPSFTMCNVY 331 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG--------- 219 +S + S +L ++K+ VP + GD N L Sbjct: 332 VPNSGQKLERLSYRTEEWDKDFLSFIQKKQKDRGVPVLWLGDLNVAHTNLEVWNDGAKHL 391 Query: 220 --------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVM 262 ++ + F + + + +DYF+ Sbjct: 392 AKQAGVTAEERASFEAQLNAGFIDAFRRLHPTAKGHYSYWSQRAGNREPNKGLRLDYFIC 451 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + + + D ++ SDHCP+ ++ + Sbjct: 452 DPSLFDEESKTIVR------DSYVLPLQQGSDHCPVVLELE 486 >gi|159896951|ref|YP_001543198.1| endonuclease/exonuclease/phosphatase [Herpetosiphon aurantiacus ATCC 23779] gi|159889990|gb|ABX03070.1| Endonuclease/exonuclease/phosphatase [Herpetosiphon aurantiacus ATCC 23779] Length = 1052 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 44/350 (12%), Positives = 84/350 (24%), Gaps = 67/350 (19%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY-------------TLLRQYA 61 P + + +R+ N+ G V +D Sbjct: 573 PTSLELDGSLRVAGINVLNYFNTFGNGNCTGGVGGAATDCRGAENTTEFQRQKDKTIAAI 632 Query: 62 KNLDADIVFLQEMGS-----YNAVAKVFPKNTW------CIFYSTERLINHSKRDSNNDI 110 AD++ L E+ + +A+ + + + + I Sbjct: 633 IMTQADVIGLMEIENDGFGSNSAIQDLVNGLNAATAPGTYALVDVDTRTGQTNPLGTDAI 692 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSR------AGNRRAVELLVE--INGKKIWVLDI 162 A+ + V + + L NR A+ +G+ V+ Sbjct: 693 KVALLYKPGKVSLAGTTAVLNTGAFGDFTTSSGTTGRNRPALTQSFTETSSGETFTVVVN 752 Query: 163 HLKS----------FCFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKES--LVPFVIAG 209 HLKS D +C+ AQ L W+ + ++I G Sbjct: 753 HLKSKGSACTDNVSPVPSDPDLGDGQGNCNLTRKTAAQELVAWLNTDPTNVDDSDYLIIG 812 Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269 D N I + + +D+ + + + Sbjct: 813 DLNSYAMEDPI-----TAIRNAGYVNIPKTLLGDEAYSYIFDGQTGSLDHALASTSLFSQ 867 Query: 270 LIQESFSEILYNEDDIKSRG-----------------KRLSDHCPISIDY 302 + I +E R SDH PI + Sbjct: 868 VADVQELHINADEPIALDYNTNFKSAGQIVSLYNNDAYRASDHDPIVVGL 917 >gi|307566177|ref|ZP_07628632.1| endonuclease/exonuclease/phosphatase family protein [Prevotella amnii CRIS 21A-A] gi|307345142|gb|EFN90524.1| endonuclease/exonuclease/phosphatase family protein [Prevotella amnii CRIS 21A-A] Length = 365 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 42/335 (12%), Positives = 93/335 (27%), Gaps = 80/335 (23%) Query: 2 IRKYVLALVFFLVPCTASVA------------QKVRLVSWNINTLSEQEGVSLWKNSVKR 49 + L ++ + A ++++S+N+ + VS N Sbjct: 67 KKVLWLPILGLFLAYFPIRAYIPFNLPKDKPHGTIKILSYNVFLFDTWDDVSGQINP--- 123 Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 + +Y ADIV LQE ++ I ++ + Sbjct: 124 -------IVKYIVRSKADIVCLQEAT-------LYTPKAAKIMRYLKKSYPYIDNIKKKT 169 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 + + K + ++ P + V + ING K +++ H +S+ Sbjct: 170 GTDDLMLLSKFPILHREIIPYPSKSNMS--------VAYYININGTKTLLVNNHFESYGL 221 Query: 170 LDSLENTYSPSCS------------------------LLSQQAQWLKDWITQKKESLVPF 205 + + ++ + QA + ++ + + +P Sbjct: 222 SSNDKADFNNIIKGNVIGRDRINKFVSLVDKIGNTMARRAPQADAVATFVKKHLDKNIPV 281 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 ++ GDFN K ++ + + + R ID+ Sbjct: 282 ILCGDFNDNPISYSYY-TISKVLNDS-----YKSSGNGIGWTYNENRMYFRIDHIFASNE 335 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + S SDH PI Sbjct: 336 FEPYGAKVDKSIKN-------------SDHYPIYC 357 >gi|255066692|ref|ZP_05318547.1| exodeoxyribonuclease III [Neisseria sicca ATCC 29256] gi|255049020|gb|EET44484.1| exodeoxyribonuclease III [Neisseria sicca ATCC 29256] Length = 259 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S N+N + + +Y ADIV +QE+ + A Sbjct: 2 LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEA---- 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H ++ +AV K +G R Sbjct: 43 ---DLSDEMKNPHGMHGHWHCA-EKRGYSGVAVYSKRAP----DNVQIGMGIEEFDREGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + K+ V+ ++L S + L + + K Sbjct: 95 F-----VRCDFGKLSVISLYLPSGTSAPERQ-------ELKYRFLDAFYPMLEAMKAEGR 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248 V+ GD+N + + + + Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHTLGWTDMWRTLYPDNPGY 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY ++ + + ++ SDH P+ Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 251 Query: 300 IDYDF 304 ++YD+ Sbjct: 252 VEYDY 256 >gi|237749022|ref|ZP_04579502.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gi|229380384|gb|EEO30475.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 321 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 92/311 (29%), Gaps = 39/311 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWK---NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 Q++RL ++N+ L + + + + + DAD++ QE+ S Sbjct: 3 QEIRLATFNVRNLVLPDTAYYDDLAAYTHDEYEAKTEWIAKKIDQSDADVIGFQEIFSKK 62 Query: 79 AVAKV-----FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLG 132 A+ V ++ I + K +A + + +Q L Sbjct: 63 ALEHVIEKSRLYRDAELICFDQNNPPATLKPQVALLTRLPLAGSPQSHKTFPRQFEITLP 122 Query: 133 AKDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 ++ +R +E ++ NG+ + + +HLKS S + L Sbjct: 123 ITETVINQFSRPVLEAPVLLPNGQILNIFVVHLKSKRPDFLNFVNKSDPYQYGLAALRSL 182 Query: 192 KDWITQ-----------KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 ++ + +P I GDFN L + P Sbjct: 183 MRRSADALGVRALVSEFRENNALPIAILGDFNDF--SLAITTTIVSGQEHESEQPLPPFY 240 Query: 241 KDSRCNANKNL--------------RNKIPIDYFVMDQNAYKF--LIQESFSEILYNEDD 284 K C + ID+ + + I + ++Y ++ Sbjct: 241 KLYDCYEIQTDPAKNQDKILRFMEENGTARIDHIFVSEEFTPETGYITGAVKRMIYLPNE 300 Query: 285 IKSRGKRLSDH 295 +SDH Sbjct: 301 AGPERIEMSDH 311 >gi|189466216|ref|ZP_03015001.1| hypothetical protein BACINT_02586 [Bacteroides intestinalis DSM 17393] gi|189434480|gb|EDV03465.1| hypothetical protein BACINT_02586 [Bacteroides intestinalis DSM 17393] Length = 529 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 37/294 (12%), Positives = 81/294 (27%), Gaps = 36/294 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+N+ T + K +DADI L E+ +++ + Sbjct: 153 LKVVSFNVENY------------KGVNDVQRTKIVAALKAMDADIYALLEVFGNSSLNDL 200 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + I +S + A + N + + D+ + Sbjct: 201 CTALNTACQTNQYKYI----ENSTANQGMACFIYNSNTVIPFKELQKNRLADNGYLPDRK 256 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP-------SCSLLSQQAQWLKDWIT 196 A ++ N ++ V H K+ + + Y+ +A+ ++I Sbjct: 257 IAQAFDLKANNERFIVCLNHWKAKDNSYNKPDEYADTGDGQGSHVLRRVHEAEATLEFIK 316 Query: 197 QKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 ++ GD N + + + + N Sbjct: 317 TVTAYFEDEDVLVVGDLNSYSKEDPIRVLEEGKLINELQKYAPNEYSYAFFSNNSYAT-- 374 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIK---------SRGKRLSDHCPIS 299 +D+ + I +E + R SDH PI Sbjct: 375 GYLDHSFATATLDAQICYAHPFHINADEPGVLKIIGGKPQKDNMYRCSDHNPIV 428 >gi|153939510|ref|YP_001391121.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum F str. Langeland] gi|152935406|gb|ABS40904.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum F str. Langeland] gi|295319165|gb|ADF99542.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum F str. 230613] Length = 352 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 98/311 (31%), Gaps = 44/311 (14%) Query: 22 QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +V++NI G +S ++T + + + K ++ +FLQE Sbjct: 53 DSFSIVTFNIGYGGMDDKQDFFMDGGKGSRSSSKEKTMENMRGITSFLKKDNSSFIFLQE 112 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV------LQQS 127 + + + + F + + ++ + + S + + + K + V L + Sbjct: 113 VDTNS--TRSFRIDQYDYLKNSLKAYSSSMALNYKTPWVPVPILKPHGTVNAGLVNLSKY 170 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 + + + ++ + V + + ++S + Y + QQ Sbjct: 171 KINSATRYQYPGKESWPRQLAELDRCFLESRVSLENDRELVLINSHLSAYDKGGKIRKQQ 230 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---------NDDFWKTIDP--NDSLIR 236 +LK++I ++ + ++ GD+N I D K + + Sbjct: 231 LSFLKNYIIKEYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKW 290 Query: 237 FPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID F++ N + S + Sbjct: 291 VADKNVPTTRTDATPYKKGENFTAVIDGFLVSDN----IEATSVKAYPMEFKNT------ 340 Query: 292 LSDHCPISIDY 302 DH P+ +++ Sbjct: 341 --DHNPVKMEF 349 >gi|331014877|gb|EGH94933.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 291 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 38/292 (13%), Positives = 81/292 (27%), Gaps = 58/292 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 ++RL+S+NI E + + + + D D+V L Sbjct: 30 PEDGRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHVGRAGNLQKIGDLIN--DFDLVAL 87 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE+ + + + R+ + V + + +PL Sbjct: 88 QEVDGGSMRSGFVNQVEHLAQLGGFPFWYQQLNRNLGRFAQHSNGVLSRLRPTKIEDHPL 147 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G R A+ + + V+ +HL ++Q + Sbjct: 148 PGPAG-------RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQLAY 187 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 +++ I V+ GD N N L + + + Sbjct: 188 IRELIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 233 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + +D+ ++ +Q I SDH P++++ Sbjct: 234 WRPQRCLDHILLSPTLTLERVQVLAHPI--------------SDHLPVAVEI 271 >gi|330938836|gb|EGH42355.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. pisi str. 1704B] Length = 265 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 36/292 (12%), Positives = 80/292 (27%), Gaps = 58/292 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 ++RL+S+NI + + + + + D+V L Sbjct: 4 PEDGRLRLLSFNIQVGISTQRYHHYLTRSWQHLLPHGGRAGNLQKIGDLINEF--DLVAL 61 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE+ + + + R+ + V + + +PL Sbjct: 62 QEVDGGSMRSGFVNQVEHLAQLGGFPYWYQQLNRNLGRLAQHSNGVLSRLRPTKIEDHPL 121 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G R A+ + + V+ +HL ++Q + Sbjct: 122 PGPAG-------RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQLAY 161 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 +++ I V+ GD N N L + + + Sbjct: 162 IRELIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 207 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + +D+ ++ +Q I SDH P++++ Sbjct: 208 WRPQRCLDHILLSPTLTLERVQVLAQPI--------------SDHLPVAVEI 245 >gi|294499447|ref|YP_003563147.1| exodeoxyribonuclease III [Bacillus megaterium QM B1551] gi|294349384|gb|ADE69713.1| exodeoxyribonuclease III [Bacillus megaterium QM B1551] Length = 253 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 80/304 (26%), Gaps = 79/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + Y + ++AD+ +QE Sbjct: 1 MKLISWNVNGIRACVRKGF---------------LDYFQEVNADVFCIQETKLQEG-QID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S + + S R Sbjct: 45 LQLEGYYQYWNYAVKKGYSGTAVFTKQ---------------KPLSVSYGVGKESEDEGR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++ +V++++ + + L + L S Sbjct: 90 I-----ITLEFEQCYVVNVYTPNSKRDLARLEERLQWEDDLLVYLKKLN--------SRK 136 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N + T+ + L F ++ A Sbjct: 137 AVILCGDLNVAHAEIDLRNPKPNRGNSGFTIEERGKMTTLLASGFLDTFRYLYPNQEGAY 196 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ + + + + + SDHCP+ Sbjct: 197 TWWSYMNKVRERNIGWRIDYFIVSERMKNVIQESAIHPHV-----------MGSDHCPVM 245 Query: 300 IDYD 303 ++ + Sbjct: 246 LELN 249 >gi|256822174|ref|YP_003146137.1| exodeoxyribonuclease III [Kangiella koreensis DSM 16069] gi|256795713|gb|ACV26369.1| exodeoxyribonuclease III [Kangiella koreensis DSM 16069] Length = 271 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 80/312 (25%), Gaps = 76/312 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V++NIN + + + D DI+ LQE Sbjct: 1 MKIVTFNIN----------------SVRTRPHQIEALVEKHDPDIICLQE---TKVHDDA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + H +A K + + +D+ R Sbjct: 42 FPFELYA-------DLGYHIEIHGGKAHYGVATFSKQKPLTVEKGFATDPEDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + I VL+ F + + L ++ + Sbjct: 90 RMIITTYQFGNETIKVLN-----GYFPQGENREHPVKFPYKQKFYADLLSYLQNDQGDHR 144 Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N ++L ++ + I + Sbjct: 145 T-IVLGDINISPEDIDIGIGEPNRKRWLREGKCSFLPEEREWLQKILATGLYDTYRTINP 203 Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + + + D +R Sbjct: 204 DVDDKFSWFDYRSRGFEREPRRGLRIDSVFACDWLNERAVAS-------DIDYEIRSMER 256 Query: 292 LSDHCPISIDYD 303 SDH P+ ++D Sbjct: 257 PSDHAPVWTEFD 268 >gi|300813916|ref|ZP_07094220.1| exodeoxyribonuclease III [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511979|gb|EFK39175.1| exodeoxyribonuclease III [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 275 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 85/305 (27%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWNI++L+ S + + R + ++ D D+ +QE Sbjct: 1 MKFISWNIDSLNAALTSSSNRAILTR------AVLSSIRDEDPDLFAVQETKLPPTGLSK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 K + + + ++ + + K + +YP +GA S G Sbjct: 55 KHKEILEKEFQDYSYVYVTSKEEARKSYAGTMIFYKKDLECKATYPEIGAPGSMDMEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + K + ++ + + + Q L + Sbjct: 114 -----ILTLEFKDFYFSTVYTPNAGDGLKRLSDRQVWDKKYLEYCQEL--------DKNK 160 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GDFN + + + F Sbjct: 161 PLVLCGDFNVAHKEIDLANPNNNHFSAGFTDEERMGFTNLLDGGFVDTFRLINGDVEGKY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF++ Q + + + + DH PI Sbjct: 221 TWWAQRIKTSKINNSGWRIDYFLVSQRIKDKVKKSHMMDSGQRQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 ILEID 274 >gi|163814394|ref|ZP_02205783.1| hypothetical protein COPEUT_00545 [Coprococcus eutactus ATCC 27759] gi|158450029|gb|EDP27024.1| hypothetical protein COPEUT_00545 [Coprococcus eutactus ATCC 27759] Length = 382 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 46/321 (14%), Positives = 100/321 (31%), Gaps = 59/321 (18%) Query: 19 SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 S+ + +V+WNI G S++ ++ ++ ++ + + + +L DI+ Sbjct: 79 SIGDNISVVTWNIGYGSLGANADFFMDGGDSVYTSTKEQVLTNMSAITEELNSLSPDIIL 138 Query: 71 LQEMGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 LQE+ ++ + P Y+ + L+ + + I Sbjct: 139 LQEVDEKSSRSHKINEASIIRDELPSYNSSYAYNYKTLMVPYPIPPIGQVASGIMTLSTY 198 Query: 121 VRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 L R N R + V I+G ++ ++L + Sbjct: 199 PASTACRIKLPCPFSYPIRLCNLKRCLIVSKVPIDGTDKELVIVNLHLEAYD-------- 250 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWK-----T 227 S + Q + L D + + + + GDFN+ + +D+ W Sbjct: 251 -SGEGKAAQTKMLADILQAETDKGNYVIAGGDFNQTFSNTDISAYPQQSDELWAPSLIDI 309 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILY 280 + + C + + ID F++ N I Sbjct: 310 SEFGNDFTCITDSSVPTCRSLDKSYDDADEKFQFYVIDGFIVSSNISIKSI--------- 360 Query: 281 NEDDIKSRGKRLSDHCPISID 301 + + + SDH PI ++ Sbjct: 361 ---ETVNLNFQNSDHNPIKLE 378 >gi|149918584|ref|ZP_01907073.1| exodeoxyribonuclease III [Plesiocystis pacifica SIR-1] gi|149820660|gb|EDM80072.1| exodeoxyribonuclease III [Plesiocystis pacifica SIR-1] Length = 262 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 77/306 (25%), Gaps = 72/306 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A+ L++WN+N + + Y + D+ LQE NA+ Sbjct: 2 AKGFSLMTWNVN----------------SVRARLDNVLTYLDEHEPDVACLQETKVENAL 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + + + +A K + + + + Sbjct: 46 ----------FPRVPFMELGYQVALNGTKGYAGVATLVKGQKPVDVQLGFAEGPEDKHKR 95 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 ++ + + + + +++ + L S Y L+ + + Sbjct: 96 --------ILALTYEGVRIYNLYAPNGTALGSEAFAYKLD------WFARLRGELDARFG 141 Query: 201 SLVPFVIAGDFNRK---------------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 V+ GDFN ++ ++ F K D+ Sbjct: 142 PSDEVVLCGDFNIARDARDTWSVESMKGGTHFTPEEHAALDALENFGLHDCFRKFDDAPG 201 Query: 246 NANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + IDY A + + D SDH Sbjct: 202 R-FTWFDYRGGSWEKKHGLRIDYVYATAPATERCTEV-------VHDWEPRAWDEPSDHV 253 Query: 297 PISIDY 302 P+ + Sbjct: 254 PVVARF 259 >gi|37993831|gb|AAR06996.1| sphingomyelinase [Bacillus cereus] Length = 252 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 85/230 (36%), Gaps = 26/230 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTNQNNTLKVMTHNVYMLSTS----LYPNWGQNERADLIGAADYMK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 NA ++ T E S+ +A+ K + + Sbjct: 83 DNNASNRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGNYSSSTPEDGGVAIVSKWPIIEKI 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + N+ V V+ N + + V+ H+++ D++ SP+ S+ ++ Sbjct: 143 QY-VFEKGCGPDNLSNKGFVYTKVKKNDRFVHVIGTHIQA---EDNMCGQTSPA-SVRTK 197 Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230 Q Q ++++I + + +I GD N N +KT+ Sbjct: 198 QLQEIQEFIKNKNISNNEYVLIGGDMNVNKINAENNSDSEYASMFKTLHA 247 >gi|332883576|gb|EGK03859.1| hypothetical protein HMPREF9456_01926 [Dysgonomonas mossii DSM 22836] Length = 315 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 39/322 (12%), Positives = 86/322 (26%), Gaps = 57/322 (17%) Query: 27 VSWNINTL-------SEQEGVSLWKNSVKRTTSDY--------TLLRQYAKNLDADIVFL 71 + +N+ L + + + T Y + + IV L Sbjct: 1 MFYNVENLYDTKDNPATNDDEFTPGGQLHWTNYRYWQKLHNISKAVSSVGEGYPPAIVGL 60 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 E+ + + + + + + + + A+ ++ ++++ + Sbjct: 61 CEVENDSVLYHLTKRTALQKHKYEYIITRSKDQ---RGSNVALLYQRDQIKIVSRKSYTP 117 Query: 132 GAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 DS R + + + I G + + H S + C AQ Sbjct: 118 DLGDSVRS--TRDILHVTGKVIKGTLLDIFVCHFPSRREGIRKTRPHRIKC------AQL 169 Query: 191 LKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFW------KTIDPNDSLIRFPKEKD 242 L+ I +I GDFN N + ++ + + + Sbjct: 170 LRHKIDSVLLLRKGANIIIMGDFNDYPNDVSMSEVLGGKRIESDISVKGLYNLLYDRIDK 229 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKF-----LIQESFSEI-----------------LY 280 + K ID V++ N K + ++ + Sbjct: 230 KEAGSYKYKGKWGFIDQIVVNGNLLKKGGKVFVKDKTVHVFSAEFLLEADNKKYGGQKPF 289 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 SDH PI +D Sbjct: 290 RTYSGFKYLGGYSDHLPIYMDL 311 >gi|330506670|ref|YP_004383098.1| exodeoxyribonuclease III [Methanosaeta concilii GP-6] gi|328927478|gb|AEB67280.1| exodeoxyribonuclease III [Methanosaeta concilii GP-6] Length = 257 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 77/306 (25%), Gaps = 77/306 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAV 80 +R++SWN+N L + D++ LQE+ + Sbjct: 3 SMRILSWNVNGLRAIYKKGF---------------VDWLLKDRPDVLCLQEIKATEDQIP 47 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++ + F+S +A+ K + + L D RA Sbjct: 48 KELKGLPGYISFFSP----------GARKGRDGVALFTKIKTLSLEYSLGLPGFDDEQRA 97 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + + + D++ + S + D + + Sbjct: 98 ---------IVADYGDFLLFDVYFPNG-------KASKERLSYKMRFYDLFLDLMDRLVA 141 Query: 201 SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 VI GD N L + + + L F Sbjct: 142 EGRDIVICGDVNTAHKEIDLARPKPNEKISGFLPEERAWIDRLIEHGFLDTFRLFHPEGE 201 Query: 246 NANKNLRN--------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDYF + + + +Y SDHCP Sbjct: 202 KYSFWDMKTRARERNVGWRIDYFFVSLGMRDRVKSAFILDDVY-----------GSDHCP 250 Query: 298 ISIDYD 303 + I+ + Sbjct: 251 VGIEIE 256 >gi|229101774|ref|ZP_04232490.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28] gi|228681641|gb|EEL35802.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28] Length = 190 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 16/190 (8%) Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS- 178 ++L ++ +G +++ + R+ + G+ + V+ HL S + Sbjct: 6 VPKLLDKNVVRIGDENALFDS-TRKPLAAEFTFQGQNVVVVANHLNSKLGDATPFGKVQP 64 Query: 179 ---PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 S Q AQ + ++ QKK + P V+ GD N K ++ Sbjct: 65 LVLKSEEKRIQLAQEVNHFVQGIQKKNANAPVVVLGDMNDFEFSKP-----LKALEGTIL 119 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + N +D+ ++ N + + ++ +I R+S Sbjct: 120 KDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGRVS 175 Query: 294 DHCPISIDYD 303 DH P+ D Sbjct: 176 DHDPVLAQID 185 >gi|147898516|ref|NP_001079795.1| hypothetical protein LOC379485 [Xenopus laevis] gi|32450236|gb|AAH54251.1| MGC64462 protein [Xenopus laevis] Length = 345 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 35/295 (11%), Positives = 88/295 (29%), Gaps = 29/295 (9%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + C ++ S+NI S LL + + I+ ++ Sbjct: 1 MTACFLQAGFAFKIASFNIQRFSMT---------KVDDPVVLELLIRILSRYE--IIAIE 49 Query: 73 EM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 E+ A+ + + + + LI+ S+ A R+ V+ + + Sbjct: 50 EVMNADNTAIISLVKELSLATKLNYNVLISDHLGRSSYREKYAYVYREDIVKPTEWYHFD 109 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G ++ + + R + + S + +L Sbjct: 110 DGCENCGTDSFIREPFVARFT----SLTTVVKDFALISIHTSPDYAIMEVDALYDAWVDA 165 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + + +I GD+N +Y+ + + + L+ +K+ + Sbjct: 166 KQRL------KMENILILGDYNAACSYVASRHWPIIRLRHVEELVWLIGDKEDTTVSTNT 219 Query: 251 LRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302 D V + ++ ++ Y+ + K +SDH P+ ++ Sbjct: 220 N---CAYDRMVAGGEELQRGIVPDTAKAFNYHVAYDLTYEMAKAVSDHYPVEVEL 271 >gi|329115285|ref|ZP_08244040.1| Hypothetical protein APO_2103 [Acetobacter pomorum DM001] gi|326695728|gb|EGE47414.1| Hypothetical protein APO_2103 [Acetobacter pomorum DM001] Length = 139 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 12/135 (8%) Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 D+L + P+C+ L QQ L W+ + + F I GDFNR + +D + T Sbjct: 6 GCPDNLPHATRPTCATLWQQFAVLDAWVAIRTQHHEAFAIMGDFNRHLT---VHDPLFLT 62 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + L S C ID+ ++ A + I S E+ Sbjct: 63 LLRIAPLDLVTAGTASPCQNGSYF-----IDHIILGGAARAWKIPNSLRVTPLAEEV--- 114 Query: 288 RGKRLSDHCPISIDY 302 G+ LSDHCP+SI Sbjct: 115 -GQTLSDHCPVSITL 128 >gi|326406489|gb|ADZ63560.1| endonuclease/exonuclease/phosphatase family protein [Lactococcus lactis subsp. lactis CV56] Length = 352 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 40/316 (12%), Positives = 83/316 (26%), Gaps = 55/316 (17%) Query: 21 AQKVRLVSWNI--------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 Q +++++NI G + S S + D +Q Sbjct: 56 GQTYKMMTFNIGYGSYPPSFNFFMDGGDDVRAYSKSAVKSAIQEDIRLINKEKPDFGNIQ 115 Query: 73 EMGSYNAVAKVFPKNT--------WCIFYSTERLINHSKRDSNNDI---HTAIAVRKKNV 121 E+ ++ + + + + I + I K Sbjct: 116 EIDWQGDRSQQVNEPQMVRAGLPDYTSVLTQNYDSAYLFYPVTKPIGKAKSGIMTYSKYE 175 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLV---EINGKKIWVLDIHLKSFCFLDSLENTYS 178 Y L + RA + + + + KK + + HL +F Sbjct: 176 IESSTRYKLPIETNFNKFFDLDRAFSVSILPIKNSDKKFVIFNTHLSAFITDQ------- 228 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW------KTIDPND 232 + QQ L D + + + D+N + + + W + + Sbjct: 229 ---KIQKQQLLTLFDEMKKYVSKGDYVICGADYNHALAGKAHPELTWMKEFPTENLTKGM 285 Query: 233 SLIRFPKEKDSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 ++ R + ID F++ N IQ Sbjct: 286 RVVAPTNAPTVRSLDYAYDKKNPKNTFGIIDGFLVSNNIKDLKIQ------------TID 333 Query: 288 RGKRLSDHCPISIDYD 303 + SDH P+ +D+ Sbjct: 334 NQFKSSDHQPVVMDFS 349 >gi|300782769|ref|YP_003763060.1| exodeoxyribonuclease III [Amycolatopsis mediterranei U32] gi|299792283|gb|ADJ42658.1| exodeoxyribonuclease III [Amycolatopsis mediterranei U32] Length = 278 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 35/310 (11%), Positives = 79/310 (25%), Gaps = 73/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 + + + N+N L ++ AD+V QE+ + A Sbjct: 5 LTVSTVNVNGLRAAAKKGF---------------VEWLAATKADVVACQEVRAEASQLPA 49 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 V + W ++ S +AV + + +G + Sbjct: 50 AVVGPDGWFSVHAP----------SAVKGRNGVAVYSRVEPEEVR----IGFGEPEFEDS 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R +E++ + V ++L S ++ + L+ + + Sbjct: 96 GRY-----LEVHLPNVVVASLYLPSGDVGTERQDEKERFMAAFLPYLAELR---AKAAAA 147 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 V+ GD+N + + + Sbjct: 148 GREAVVVGDWNIAYDTVDLKNWRGNRKNSGFLPEERAWLGRVYTEAGYTDVQRRLDPEGP 207 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + ID + + ++ + + +R SDH Sbjct: 208 GPYTWWSYRGQAFDNDSGWRIDCQLATPGLAEKVVDV-------VVERAAAYDQRWSDHA 260 Query: 297 PISI--DYDF 304 P++ D DF Sbjct: 261 PVTATYDIDF 270 >gi|50540416|ref|NP_001002674.1| deoxyribonuclease-1 [Danio rerio] gi|49903846|gb|AAH76479.1| Zgc:92440 [Danio rerio] Length = 278 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 95/307 (30%), Gaps = 37/307 (12%) Query: 3 RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 K+++ L LV + + ++NI + NS + ++ + Sbjct: 1 MKFIITLGVLLVSV--HIGSSFLIGAFNIKSFG---------NSKVSNATLLDIITKVVH 49 Query: 63 NLDADIVFLQEMGSYN--AVAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 DI+ +QE+ + A +K+ N Y + + + + R + Sbjct: 50 RY--DIILIQEVRDSDLSATSKLMDSVNGGSSPYQYDYIASEPLGRNTYKERYLFVYRSE 107 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 +V + + G + + NR ++ + Sbjct: 108 SVSAVNSFHYDDGCEPCGTDTFNREPFVVMFSSKTAVRDFALVPQH-------------T 154 Query: 180 SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 S + Q+ L D + ++ + ++ GDFN Y+ N+ + + S Sbjct: 155 SPEVAVQEIDALHDVVLDTRQRLNTNNIMLLGDFNAGCRYVSNSAWANIRLRTDQSYTWL 214 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDH 295 + + N D V + + + S + E S+ L SDH Sbjct: 215 IPDSADTTVTHTNCPY----DRIVATPDMMRGVAPGSAQVFDFMEAHGLSQDWALAVSDH 270 Query: 296 CPISIDY 302 P+ + Sbjct: 271 FPVEVKL 277 >gi|77163744|ref|YP_342269.1| exodeoxyribonuclease III xth [Nitrosococcus oceani ATCC 19707] gi|76882058|gb|ABA56739.1| Exodeoxyribonuclease III [Nitrosococcus oceani ATCC 19707] Length = 237 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 36/271 (13%), Positives = 77/271 (28%), Gaps = 60/271 (22%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + + + D++ LQE V FP+ + + S + +A+ Sbjct: 1 MVDWLEIHQPDVLALQE---TKLVDDSFPQEAFKEI-------GYHAAYSGQKTYNGVAI 50 Query: 117 RKKN-VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + + + P L RR + + V+ I +L++++ + + S + Sbjct: 51 LCRQAPKDILTDLPNLVDS-------QRRILGVTVD----DIRLLNLYVPNGSEVGSKKY 99 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD------------ 223 Y +KD++ + ++ GDFN +D Sbjct: 100 AYKLD------WLGRIKDYLQEALVEYPKLIVLGDFNVAPADQDVHDPDIWHETILCSTP 153 Query: 224 ---FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLI 271 K I + + + + ID ++ + Sbjct: 154 EREALKEILALG-FQDSFRLFEQEAQSFSWWDYRGGAFRRNRGLRIDLILISKALVPKCT 212 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D R R SDH P+ + Sbjct: 213 GCVI-------DKEPRRLTRPSDHAPVIATF 236 >gi|329113350|ref|ZP_08242131.1| Exodeoxyribonuclease III [Acetobacter pomorum DM001] gi|326697175|gb|EGE48835.1| Exodeoxyribonuclease III [Acetobacter pomorum DM001] Length = 245 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 30/268 (11%), Positives = 71/268 (26%), Gaps = 51/268 (19%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 ++L D+V LQE +FP++ + +A+ ++ Sbjct: 1 MQHLAPDVVCLQE---TKVPDPLFPEDGVKALGFEHL------HYRGMKGYNGVAILSRH 51 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 P+ K+ V V ++ + D ++ + D + +P Sbjct: 52 PLRPVTQTPIWYGKEDCRH------VAATVCTPEGEMELHDFYIPAG--GDEPDPETNPK 103 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI---------------NYLGNNDDFW 225 + + + +W + + V+ GDFN ++ + Sbjct: 104 FAHKLAFVEEVTEWFQSRPLNRT--VLVGDFNIAPLEHDVWSHKQLLKIVSHTPPETERL 161 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIP----------IDYFVMDQNAYKFLIQESF 275 + + +D+ M + L + Sbjct: 162 NRWLQTGFVDAMRHFVPPEEKLYTWWSYRNRDWKKSNRGRRLDHVWMTPDLLPNLHGMTV 221 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 + SDH P+ +D+ Sbjct: 222 V-------REARDWEGPSDHVPVVVDFS 242 >gi|260589302|ref|ZP_05855215.1| endonuclease/exonuclease/phosphatase family protein [Blautia hansenii DSM 20583] gi|260540383|gb|EEX20952.1| endonuclease/exonuclease/phosphatase family protein [Blautia hansenii DSM 20583] Length = 354 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 45/326 (13%), Positives = 102/326 (31%), Gaps = 64/326 (19%) Query: 17 TASVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 T S+ +R++++NI G + +S ++ ++ T +++ AD+ Sbjct: 50 TLSLDDSLRIMTYNIGYAGLDKSEDFFMDGGSEVQPDSKEQVETNLTGIKKVLTENPADV 109 Query: 69 VFLQEMGSYNAVAKVFPKNTW---------------CIFYSTERLINHSKRDSNNDIHTA 113 FLQE+ + + + + + L K +S T Sbjct: 110 YFLQEVDKDSKRSFHIDETEYLKSSLNMEGIFAYNFKCDFVPYPLPPIEKVNSGIFTMTD 169 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 + V L +S+ + R + +E ++ +++ HL+++ D Sbjct: 170 LKVNSAARLALPESFSWPVKTCNLKRCMQE--TRIPLEGTDAELVLINFHLEAYDDGDGK 227 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------RKINYLGNNDDFWKT 227 Q++ L + ++++ E+ + GDFN K + Sbjct: 228 IA-----------QSKMLAEKLSKEYEAGNYVIAGGDFNQTFEGMDKYPITNTENWVPGI 276 Query: 228 IDPN---DSLIRFPKEKDSRCNANKNLRNKIP-------IDYFVMDQNAYKFLIQESFSE 277 I + + + C ID F++ N I ++ Sbjct: 277 IGQDTLPEHFSFAVDDTYPTCRLLNAPYTGSYETSQVYVIDGFIVSDNITVSDISVINTD 336 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 Y DH P+ ++ Sbjct: 337 FEYT------------DHQPVQMEIS 350 >gi|197303592|ref|ZP_03168630.1| hypothetical protein RUMLAC_02320 [Ruminococcus lactaris ATCC 29176] gi|197297326|gb|EDY31888.1| hypothetical protein RUMLAC_02320 [Ruminococcus lactaris ATCC 29176] Length = 250 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 73/303 (24%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + + DADI +QE Sbjct: 1 MKLISWNVNGIRACVQKGF---------------LDFFHEADADIFCIQETKMQEG-QLN 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ AV K + + D R Sbjct: 45 LELERYHQYWN----------YAVKKGYSGTAVFTKKEPLSVSYGLGIEEHDQEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + + ++ + + + + L+ Sbjct: 91 -----VITCEFEDFYFVTVYTPNSQSELARLDYRMKWEDDFRAYLKKLEK--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + F + Sbjct: 138 PVIVTGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKFTELLDAGFIDTFRYFYPDQEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + L + SDHCPI Sbjct: 198 SWWSYRFSARAKNAGWRIDYFCVSECLKDRLADAKILTEV-----------MGSDHCPIE 246 Query: 300 IDY 302 +D Sbjct: 247 LDL 249 >gi|170033629|ref|XP_001844679.1| sphingomyelin phosphodiesterase 2 [Culex quinquefasciatus] gi|167874647|gb|EDS38030.1| sphingomyelin phosphodiesterase 2 [Culex quinquefasciatus] Length = 423 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 43/298 (14%), Positives = 87/298 (29%), Gaps = 40/298 (13%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++ +++ NI + + + + + DIV LQE+ S + Sbjct: 2 ALELSILTLNIWGIPYVSKDRA---------VRVEAIGEVLASGNYDIVSLQEVWSESDY 52 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD----- 135 + + + ++ + +AV K V + Sbjct: 53 RYLKERAAAALPFAHYFYSGVVG--------SGLAVLSKYPIVSAFFHAWSVNGYVHRIQ 104 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 G + + + +N + + V HL + + + + QA +I Sbjct: 105 HGDWFGGKGVGFVKISVNEQLVHVYAAHLHA-----EYDRSCDDYMAHRVIQAYDTAQFI 159 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCN 246 + + V V+AGD N + L D K + + L ++S + Sbjct: 160 ENTQGNGVLQVLAGDLNTEPGDLAYRVLQTCSRLTDSADKKMYASGDLNTNEIARNSYTD 219 Query: 247 A--NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 K IDY + + L D I + SDH + Sbjct: 220 PEAAKKSPKGKRIDYIMYR--FGSHYEGKLLEHRLPLPDRIPGKDISYSDHEAVYAKI 275 >gi|15965402|ref|NP_385755.1| exodeoxyribonuclease III protein [Sinorhizobium meliloti 1021] gi|307308792|ref|ZP_07588488.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti BL225C] gi|307317265|ref|ZP_07596706.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti AK83] gi|15074583|emb|CAC46228.1| Probable exodeoxyribonuclease III [Sinorhizobium meliloti 1021] gi|306897353|gb|EFN28098.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti AK83] gi|306900798|gb|EFN31409.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti BL225C] Length = 264 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 77/303 (25%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N ++ +L ++ + D+V LQE Sbjct: 1 MKIATYNVNGVNG----------------RLGVLLRWLEEASPDVVCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +A+ ++ L G D +R Sbjct: 35 LKAPDPKFPVKAIEAAGYGAIWHGQKSWNGVAILARDREPTLTRKGLPGDPDDTH---SR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + + ++L + + Y + L + + E V Sbjct: 92 YIEAAV-----EGMVIGCLYLPNGNPYPGPKFEYKLAWFHR------LTAYAAELLELDV 140 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++AGD+N L D + + + Sbjct: 141 PVILAGDYNVMPTELDVYKPERWVNDALFRIEVRDAYHRLLEQGWTDALRQLHPGERVYT 200 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ + L D + SDH P I Sbjct: 201 FWDYFRNAFARDAGLRIDHLLLSPHVTLRLSAAGV-------DRHVRGWEHTSDHAPAWI 253 Query: 301 DYD 303 + Sbjct: 254 ELS 256 >gi|305666478|ref|YP_003862765.1| hypothetical protein FB2170_09421 [Maribacter sp. HTCC2170] gi|88708745|gb|EAR00980.1| hypothetical protein FB2170_09421 [Maribacter sp. HTCC2170] Length = 297 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 42/318 (13%), Positives = 88/318 (27%), Gaps = 40/318 (12%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M K ++A +F V + +L+S+NI E + T L + Sbjct: 1 MKVKPLVAFLFLFVLTNGIGQENFKLISYNIWNGFEWG----------KDTVRQEKLLSW 50 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + D+V LQE+ YN ++ + L+ + I +++K Sbjct: 51 MDSKKPDVVALQELCDYN--DDKLTQDAKAWGHDYSVLLKTTGYSVGLTSKYPIVLKEKI 108 Query: 121 ----------------VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164 + P K S ++L ++ K ++ Sbjct: 109 IEGMHHGALHCSTNGFEIFVVHLSPSQWEKRSEEAEILSGIIDLEIKAGNK--VLVCGDF 166 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 + D+ +++ D +E + + F + + Sbjct: 167 NALSPADADWYNSRADLLQDARKRDEKNDQSENLREGNFDYSVMSKFYGVGLFDNASKFV 226 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 D + ++ ++ + IDY + N I Sbjct: 227 GTGNDRISFPTQVFRKTETDKKKLIDRGT--RIDYILTSYNLVNQCIDTKI--------Y 276 Query: 285 IKSRGKRLSDHCPISIDY 302 LSDH P+ + Sbjct: 277 NGPEAYFLSDHYPVESSF 294 >gi|330965675|gb|EGH65935.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 291 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 38/292 (13%), Positives = 82/292 (28%), Gaps = 58/292 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 ++RL+S+NI E + + + + D D+V L Sbjct: 30 PEDGRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHVGRAGNLQKIGDLIN--DFDLVAL 87 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE+ + + + + R+ + V + + +PL Sbjct: 88 QEVDGGSMRSGFVNQVEHLAQLGSFPFWYQQLNRNLGRFAQHSNGVLSRLRPTRIEDHPL 147 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G R A+ + + V+ +HL ++Q + Sbjct: 148 PGPAG-------RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQLAY 187 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 +++ I V+ GD N N L + + + Sbjct: 188 IRELIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 233 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + +D+ ++ +Q I SDH P++++ Sbjct: 234 WRPQRCLDHILLSPTLTLERVQVLAHPI--------------SDHLPVAVEI 271 >gi|225708354|gb|ACO10023.1| Deoxyribonuclease gamma precursor [Osmerus mordax] Length = 318 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 37/286 (12%), Positives = 85/286 (29%), Gaps = 33/286 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---YNAV 80 VR+ ++N+ E S + L + D+ LQE+ Sbjct: 23 VRICAFNVQGFGE---------SKAQNPKVMHTLVRIIARC--DVCLLQEVRDQKKRALP 71 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 A + N + + + + + + R +V V Y + A Sbjct: 72 ALLESLNRYDPDHDYQYVASEPLGRKSYKEQYVFVYRTGSVAVT-GQYQYPDSLPGDEDA 130 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +R + + + + + ++ +++ L D K+ Sbjct: 131 FSREPFVVRFKAPSTALGEFVLIPQHTSPSNA------------TREIDALYDVFQAVKK 178 Query: 201 --SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + + GDFN Y+ + + + S + +K+ I Sbjct: 179 RWNTEMVMFLGDFNADCGYVAKKNRVKVRLYSDPSFLWLISDKEDTTVRASTSCTYDRI- 237 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 V + ++ S ++++ S + L SDH P+ + Sbjct: 238 -VVHGSEFSRGIVPYSAKPFNFDKEYQLSEEQALEVSDHYPVEVVL 282 >gi|15672926|ref|NP_267100.1| hypothetical protein L169897 [Lactococcus lactis subsp. lactis Il1403] gi|12723881|gb|AAK05042.1|AE006329_1 unknown protein [Lactococcus lactis subsp. lactis Il1403] Length = 352 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 40/316 (12%), Positives = 83/316 (26%), Gaps = 55/316 (17%) Query: 21 AQKVRLVSWNI--------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 Q +++++NI G + S S + D +Q Sbjct: 56 GQTYKMMTFNIGYGSYPPSFNFFMDGGDDVRAYSKSAVKSAIQEDIRLINKEKPDFGNIQ 115 Query: 73 EMGSYNAVAKVFPKNT--------WCIFYSTERLINHSKRDSNNDI---HTAIAVRKKNV 121 E+ ++ + + + + I + I K Sbjct: 116 EIDWQGDRSQQVNEPQMVRAGLPDYTSVLTQNYDSAYLFYPVTKPIGKAKSGIMTYSKYE 175 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLV---EINGKKIWVLDIHLKSFCFLDSLENTYS 178 Y L + RA + + + + KK + + HL +F Sbjct: 176 IESSTRYKLPIETNFNKFFDLDRAFSVSILPIKNSDKKFVIFNTHLSAFITDQ------- 228 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW------KTIDPND 232 + QQ L D + + + D+N + + + W + + Sbjct: 229 ---KIQKQQLLTLFDEMKKYVSKGDYVICGADYNHALAGKAHPELTWMKEFPTENLTKGM 285 Query: 233 SLIRFPKEKDSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 ++ R + ID F++ N IQ Sbjct: 286 RVVAPTNAPTVRSLDYAYDKKNPKNTFGIIDGFLVSNNIKDLKIQ------------TID 333 Query: 288 RGKRLSDHCPISIDYD 303 + SDH P+ +D+ Sbjct: 334 NQFKSSDHQPVVMDFS 349 >gi|291241198|ref|XP_002740507.1| PREDICTED: sphingomyelin phosphodiesterase 2, neutral-like [Saccoglossus kowalevskii] Length = 517 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 38/299 (12%), Positives = 74/299 (24%), Gaps = 41/299 (13%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K++L++ N K + + D D+V LQE+ S Sbjct: 129 KLKLLTLN---------CWAIPFLSKLRKERIRHIGEEISTRDYDVVCLQEVWSSKDFKS 179 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + S + + + + Y G + Sbjct: 180 LKDM------LSDCLPYAYQFHSGVVGSAICVFSKSPITEMFYHKYSANGLPHFWHPGEW 233 Query: 143 RRAVEL---LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 + + +G KI + HL + + QA L +I Sbjct: 234 LTGSMVGLCRIIHHGIKINIYVTHLH-----EETNAIKKYYYAHRLIQAYELSQFIKFTT 288 Query: 200 ESLVPF-VIAGDFNRKINYLGNN----------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN + + G + N+ S Sbjct: 289 SESSDVNVLMGDFNTEQHEGGYELICKLIEMNDSWITQQSKANEHSAGITCVSPSNPFTI 348 Query: 249 KN----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + N IDY + + + + + + SDH ++ + Sbjct: 349 PDELKMWPNGARIDYIFYNSSQRYDVKCIETNVTMTKV---PGKDYSYSDHEGVATTLE 404 >gi|146413308|ref|XP_001482625.1| hypothetical protein PGUG_05645 [Meyerozyma guilliermondii ATCC 6260] Length = 308 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 91/313 (29%), Gaps = 31/313 (9%) Query: 3 RKYVLALVFFLVPCTASVA------------QKVRLVSWNINTLSEQEGVSLWKNSVKRT 50 K++ A + LV A+ R+ S N+ +E+ + +R Sbjct: 1 MKFLFAQILLLVSAVAAQPVQWSDLETRDTDLAFRIYSNNVREYTEK-RFPDERPWDERK 59 Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR-DSNND 109 L + +V LQE+ V + N + Sbjct: 60 YGVIEALNSRIHDF-PTLVGLQELKHNQLVDVLAGLNGQNQTEFPWAHYGVGRDDGVEKG 118 Query: 110 IHTAIAVRKKNVRVLQQSY----PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 ++AI +L +Y P AG+RR V + N + ++ Sbjct: 119 EYSAILYNTLEWDLLNGTYKWLSPTPDVPSYGWDAGSRRIVTMTTFRNKQTGTKVNYFNT 178 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 + S + + + W+ Q + P + GDFN + + Sbjct: 179 HL---------DNKSEQSRQESTKLIVGWL-QLIPNDYPQFLLGDFNSIASDIAYETVAD 228 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 D N ++ + ++ ID+ N+ K + + Y Sbjct: 229 YMADTNVIANIHETGNETTYTGFEYGDHQSVIDFIWAPSNSNKP--KSGVEVVGYEVLSN 286 Query: 286 KSRGKRLSDHCPI 298 R SDH P+ Sbjct: 287 NYLDFRFSDHRPV 299 >gi|302552034|ref|ZP_07304376.1| exodeoxyribonuclease III [Streptomyces viridochromogenes DSM 40736] gi|302469652|gb|EFL32745.1| exodeoxyribonuclease III [Streptomyces viridochromogenes DSM 40736] Length = 274 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 32/311 (10%), Positives = 76/311 (24%), Gaps = 71/311 (22%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A+ + + S N+N L ++ +AD++ LQE+ Sbjct: 6 ARVLTVTSVNVNGLRAAAKKGF---------------VEWLGQTEADVLCLQEVR----- 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + H +++ + Q D R Sbjct: 46 ----AEPEQLPEHVRTPEGWHVTHAPAAAKGRAGVSLYTRREPDRVQVGFGSEEFDGSGR 101 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 + ++ G + V ++L S ++ + L++ Sbjct: 102 -------YVEADLPG--VTVASLYLPSGEVGTERQDEKERFMGEFLAHLKGLRERA---A 149 Query: 200 ESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTID--PNDSLIRFPKEK 241 ++ GD+N + + +D + Sbjct: 150 AEGREVLVCGDWNIAHQKADLKNWRGNQKNSGFLPEEREWLGRVLDPADGGYVDVVRALH 209 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + ID V ++ + S +R Sbjct: 210 PDTEGPYSWWSYRGRAFDNDSGWRIDLAVATPRLAARAVKA-------VVERAASHEERW 262 Query: 293 SDHCPISIDYD 303 SDH P+++ ++ Sbjct: 263 SDHAPVTVVFE 273 >gi|94967527|ref|YP_589575.1| endonuclease/exonuclease/phosphatase [Candidatus Koribacter versatilis Ellin345] gi|94549577|gb|ABF39501.1| Endonuclease/exonuclease/phosphatase [Candidatus Koribacter versatilis Ellin345] Length = 246 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 36/282 (12%), Positives = 84/282 (29%), Gaps = 47/282 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++N++ + +D + + LDAD++ +QE+ Sbjct: 3 LRIATYNVHKCRGLDR-----------RTDPERIATVIRELDADVIAMQEILDVRDGHPG 51 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + E + S + + ++Y + + R Sbjct: 52 HDQARRIATNLQEYEWRFGENRSLHGGAYGNMTLSRLPITASENYDIT-----WRHRERR 106 Query: 144 RAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA-QWLKDWITQKKES 201 + V + + + + ++HL S QA + L + + ++ E Sbjct: 107 GCLRTDVSLTDRSVLHLFNLHLG-------------TSFVERRHQARKLLTEAVLRRAEF 153 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 P ++ GDFN + + P+ + + +D+F Sbjct: 154 TGPRIVLGDFNEWT------RGLASRLMGTEFEAIEPRTHLRYARTYPGVMPLLHLDHFY 207 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D+ ES+ SDH P+ ++ Sbjct: 208 FDRTLS----LESYCIHR------SRTALIASDHLPLVSEFS 239 >gi|89071355|ref|ZP_01158492.1| endonuclease/exonuclease/phosphatase family protein [Oceanicola granulosus HTCC2516] gi|89043144|gb|EAR49387.1| endonuclease/exonuclease/phosphatase family protein [Oceanicola granulosus HTCC2516] Length = 232 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 85/283 (30%), Gaps = 57/283 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA- 81 +RL S+NI + D + Q + DAD+V LQE+ Sbjct: 2 TLRLASYNIRKCLGTDR-----------RRDPHRILQVLRQADADVVALQEVDMRLGPRP 50 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 P+ L + + S I +R+ + + PL G Sbjct: 51 AALPRALVEAETDYAPLALVTSKSSLGWHGQTILLRRGLRILSEARVPLPGL-------E 103 Query: 142 NRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R AV + VE G+ I V+ +HL +Q + + + Sbjct: 104 PRGAVLVEVEDPGRGPIRVVGVHL-------------GLLRRDRLRQIRAILSALR--AR 148 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 +P I GDFN G + +P + + + R + +D Sbjct: 149 GPMPAAIMGDFNEWSEARG-----LQGFEPPWEVH-------TPGPSFHARRPMLALDRI 196 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 V+ + + +R SDH PI + Sbjct: 197 VLGPGLALQRSGVVATALS----------RRASDHLPIWAEVT 229 >gi|332654136|ref|ZP_08419880.1| exodeoxyribonuclease III [Ruminococcaceae bacterium D16] gi|332517222|gb|EGJ46827.1| exodeoxyribonuclease III [Ruminococcaceae bacterium D16] Length = 252 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 77/304 (25%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + D LQE A V Sbjct: 1 MKLISWNVNGLRACLKKGFLDFY---------------QEQKPDFCCLQETKMEQGQADV 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++++ +S H +AVR G R Sbjct: 46 DLGENMLEYWNSAEKKGYSGTAVFTP-HQPLAVRY-------------GMGKEEHDHEGR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +K +++ + + + + L+ ++ + + + Sbjct: 92 L-----ITLEYEKFYLVCCYTPN-------SQSELKRLDYRMEWEDDLRAYLME-LDKVK 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + T+ + F Sbjct: 139 PVIYCGDLNVAHREIDLKNPKTNRMNAGFTDQEREKMTTLLSSGFTDTFRFLYPDLEGVY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ + + + SDHCP+ Sbjct: 199 SWWSYRFQARKKNAGWRIDYFIVSDRLQNAIKRAEILTQV-----------EGSDHCPVL 247 Query: 300 IDYD 303 ++ D Sbjct: 248 LELD 251 >gi|257463185|ref|ZP_05627585.1| hypothetical protein FuD12_04976 [Fusobacterium sp. D12] gi|317060775|ref|ZP_07925260.1| dnase I-like protein dhp2 precursor [Fusobacterium sp. D12] gi|313686451|gb|EFS23286.1| dnase I-like protein dhp2 precursor [Fusobacterium sp. D12] Length = 274 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 94/303 (31%), Gaps = 42/303 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++ + L+FF + AS+AQ+ + ++N+ L E D+ + + Sbjct: 1 MKFFYPYLLFFCLSI-ASLAQEAYIATFNVLKLGESP-------------KDFETIAKTM 46 Query: 62 KNLDADIVFLQEMGSYNAVAKVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + D+V L+E+ + + ++ N + + + + A +K Sbjct: 47 NHF--DLVGLEEVITPEGLERLVKSLNKYTNYTWDYHISPFPVGTRKYKEYYAYVWKKDK 104 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 V+ L + + R +I ++ H Sbjct: 105 VKFLASEGFYPDKE----KLFIREPYGASFQIGNFDFTLVLQHAVYGKSETER------- 153 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---RKINYLGNNDDFWKTIDPNDSLIRF 237 + + + + +I GDFN + +D + I D I+ Sbjct: 154 -RAEAFHLIKVYRYFQDRDRKENDILIGGDFNLSAFDEAFSPLYEDKDQIIYGIDPNIKT 212 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ D + + + +S + + D K ++SDH P Sbjct: 213 TIGMKKMANSY---------DNIFLSKIYTQEFTGKSGAVD-FTNRDYKVMRNKVSDHLP 262 Query: 298 ISI 300 + I Sbjct: 263 VFI 265 >gi|86741914|ref|YP_482314.1| endonuclease/exonuclease/phosphatase [Frankia sp. CcI3] gi|86568776|gb|ABD12585.1| Endonuclease/exonuclease/phosphatase [Frankia sp. CcI3] Length = 385 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 35/277 (12%), Positives = 81/277 (29%), Gaps = 29/277 (10%) Query: 46 SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105 + + Q +++AD++ + E + A+ + ++ + + Sbjct: 118 TGPVDETAIRSTAQVITDINADVLAVIEAENRPALVRFNTSLLAGLYAHVMLVDGND--- 174 Query: 106 SNNDIHTAIAVRKKNVR-VLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIH 163 I + + + + +R + G IWVL H Sbjct: 175 -PRGIDVGLLAKPGHTIGSIVSHVDDPDPARPDRPLFSRDCPAYELHTPAGNTIWVLPNH 233 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV-IAGDFN--RKINYLGN 220 LKS + + L +QA + + T +++ ++ + GD N + Sbjct: 234 LKSQSWTSGNPD------PLRRRQAHRVAEIYTALRDAGARYIAVVGDLNKPPPPAFPSL 287 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 D+ R + R ++ + +DY ++ + + Sbjct: 288 EPLLGPDSPLVDAASRAGFDTGPRPGTFQSCTARNRLDYILLSPDLADRMTGGQIVRTGL 347 Query: 281 NED--------------DIKSRGKRLSDHCPISIDYD 303 D I + SDH + +D D Sbjct: 348 WGDPDNKHPSAQWVIHPKITRADQAASDHAALYVDLD 384 >gi|296414217|ref|XP_002836799.1| hypothetical protein [Tuber melanosporum Mel28] gi|295631638|emb|CAZ80990.1| unnamed protein product [Tuber melanosporum] Length = 610 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 38/331 (11%), Positives = 90/331 (27%), Gaps = 65/331 (19%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEM 74 + S + +N+ L+ +++ + + D VFLQE+ Sbjct: 298 SGSTCSGLTFGCYNVENLAL-------------SSAHLPQVADHIVTYMGTPDFVFLQEV 344 Query: 75 GSYNAVAKVFPKNTWCI-----------------FYSTERLINHSKRDSNNDIHTAIAVR 117 + ++ F + + +I A Sbjct: 345 QDDDGSNNSGNVSSNQTLAALSAAIRDRSGVSYEFAVIDPVDGMDGGQPGGNIRVAYFYN 404 Query: 118 KKNVRVLQ------------------QSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIW 158 + V + P + + +R+ + + + G K++ Sbjct: 405 PEFFTVRNPNPGSSTEATEVLPGLELKFNPGRIDPVNVAWTNSRKPLAAVFDTGDGDKVF 464 Query: 159 VLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFN 212 V+++H S S+++ P + QA+ + ++++ +IAGDFN Sbjct: 465 VINVHFTSKGGSSSIQSDARPPVNGGLADRQAQAESVASFVSKILAEDRTAKIIIAGDFN 524 Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 D L N +D+ ++ + Sbjct: 525 EFTYVSPMRAFDGIAYD----LDVVTSTPVEERYTYLFDMNSQQLDHMLVSYEITQR--- 577 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + +SDH P + Sbjct: 578 -DPEYEHVHINTWNTLEGEVSDHDPSVAKLN 607 >gi|322417960|ref|YP_004197183.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M18] gi|320124347|gb|ADW11907.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M18] Length = 346 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 86/310 (27%), Gaps = 84/310 (27%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + +R+++WNI D L + + DIV Q+ Sbjct: 91 AEASGATLRVMTWNIKY----------------GKRDLMPLIEELERSRPDIVLFQDAVR 134 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + S +L + +A R V + P K Sbjct: 135 -------AGEGPLVDYLSGWQLESRG--------QYLVASRYPISAVEVHALPSRDRKKE 179 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP--------------SCS 182 + V + ++I + ++H K+ + + Sbjct: 180 TF-------LRCRVRVGSREISLYNVHFKTPRRSLNAFRKAKRGAWYIPKAIDRFEGNVE 232 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 QA+ + +++ F++AGDFN ++ +T+ F + Sbjct: 233 TRLLQAERVAEYLG---RERGDFLVAGDFN-----SPDHSLVCETLRKTGMTDAFAEAGR 284 Query: 243 SRCNANKNL----------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + + + ID+ + + + +R Sbjct: 285 GYGYSYGHFLLKDRIPYLRASWMRIDHIMTSAGLRAR--------------NCRVGTRRA 330 Query: 293 SDHCPISIDY 302 SDH P+ D+ Sbjct: 331 SDHRPVIADF 340 >gi|300776178|ref|ZP_07086037.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] gi|300505311|gb|EFK36450.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] Length = 311 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 84/311 (27%), Gaps = 47/311 (15%) Query: 29 WNINTLSEQEGVS----------LWKNSVKRTTSDYTLLRQYAKNLDAD------IVFLQ 72 +N+ L + L KR + + + + D ++ L Sbjct: 7 YNVENLFLPDPKPVHKLDPTRSGLRNWDEKRYRNKLFKISHVFQLMKEDNGVLPFMIGLS 66 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ + + + Y + +R + A+ K V V+ Sbjct: 67 EVSGRKVLEDLVEMEPFNSEYGIVHYNSMDERKVD----VAMLYDKNKVEVIDSETITFF 122 Query: 133 AKDSFSRAG----NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + R + ++ G+ I V HL S D + + + + Sbjct: 123 FEIVNKNTENYDTTRDVLFSKIKYKGEIINVFIAHLPSKREKDINKPKRAFILNEIR--- 179 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + + ++ GDFN + + + F + +R + Sbjct: 180 ---QRIMKIVDADKEHVILCGDFNENPDDENLVQILYDNEHEKVLVNPFQQLFSTRNYST 236 Query: 249 KNLRNKIPIDYFVMDQNAYK-----------------FLIQESFSEILYNEDDIKSRGKR 291 + ++ + D +M ++ +F + Sbjct: 237 FHYKSGLLYDQIIMSRSLLDNKTLAFQDAHIFNSEKIRSRTRNFEGRPFRTYAGTRYLGG 296 Query: 292 LSDHCPISIDY 302 SDH P+ + + Sbjct: 297 YSDHFPVFVKF 307 >gi|328773337|gb|EGF83374.1| hypothetical protein BATDEDRAFT_9186 [Batrachochytrium dendrobatidis JAM81] Length = 580 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 38/333 (11%), Positives = 87/333 (26%), Gaps = 45/333 (13%) Query: 15 PCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++ + ++ +N + + + + L+ Q N +ADIV LQ Sbjct: 232 SSNKTASESITIMCYNTLCQKYATPQSYAYTPSWALSWEYRRDLILQDILNYNADIVCLQ 291 Query: 73 EMGSYNAVA----KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 E+ ++ + + + + + K + + + Sbjct: 292 EIDMGQFEDYFKVQLAHLADYEGVFYPKSRSKTMNEYERRQVDGCATLFKTTKFRMLEKF 351 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT------YSPSCS 182 + R R++ ++L + K + +L+ D L C Sbjct: 352 NAEFQTIAMQRPDLRQSQDVLNRVMVKDNIAVMTYLEHIGSGDRLMIANAHLHWDPAYCD 411 Query: 183 LLSQQAQWLKDWIT------------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTID- 229 + Q + + + + K+ V ++ GD N + Sbjct: 412 VKLIQTAMMIEEVERLLSVWQKTHRTEGKQPTVSTIVCGDLNSLPQSGVVEFLSQGHVSA 471 Query: 230 PNDSLIRFPKEKDSRC-------------------NANKNLRNKIPIDYFVM-DQNAYKF 269 +D + F E S N IDY + Sbjct: 472 DHDDIKAFNYEPYSNGGLTHKLSLKSAYSHVDVMDFTNFTPTFCGVIDYIWYTTNSLSVA 531 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + SDH P+ + Sbjct: 532 GLLSHVDRDYVAKSVGFPNAHHPSDHIPLVVSL 564 >gi|296214367|ref|XP_002753758.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 1 [Callithrix jacchus] gi|296214369|ref|XP_002753759.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 2 [Callithrix jacchus] Length = 318 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 73/311 (23%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +++ SWN++ L + K DI+ LQE Sbjct: 53 TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K + + S+ + ++ + + + + G Sbjct: 98 KCSE------NKLPAELQELPGLPHQYWSAPSDKEGYSGVGLLSRQCPLKVS----YGIG 147 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R V ++ ++ + + + L Sbjct: 148 EEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ + L Sbjct: 255 HLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 306 --GSDHCPITL 314 >gi|289674481|ref|ZP_06495371.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae FF5] Length = 269 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 36/292 (12%), Positives = 80/292 (27%), Gaps = 58/292 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 ++RL+S+NI + + + + + D+V L Sbjct: 8 PEDGRLRLLSFNIQVGISTQRYHHYLTRSWQHLLPHGGRAGNLQKIGDLINEF--DLVAL 65 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE+ + + + R+ + V + + +PL Sbjct: 66 QEVDGGSMRSGFVNQVEHLAQLGGFPYWYQQLNRNLGRLAQHSNGVLSRLRPTKIEDHPL 125 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G R A+ + + V+ +HL ++Q + Sbjct: 126 PGPAG-------RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQLAY 165 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 +++ I V+ GD N N L + + + Sbjct: 166 IRELIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 211 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + +D+ ++ +Q I SDH P++++ Sbjct: 212 WRPQRCLDHILLSPTLTLERVQVLAQPI--------------SDHLPVAVEI 249 >gi|148975587|ref|ZP_01812458.1| hypothetical protein VSWAT3_03466 [Vibrionales bacterium SWAT-3] gi|145965015|gb|EDK30266.1| hypothetical protein VSWAT3_03466 [Vibrionales bacterium SWAT-3] Length = 347 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 41/339 (12%), Positives = 90/339 (26%), Gaps = 59/339 (17%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 +V ++N+ E S + + ++ D D++ QE+ S Sbjct: 4 PNQVTFSTFNLLNYLEPPNAYYDFENIYSFDEWQKKQHWIAEAIRSTDCDVIGFQEIFSP 63 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAK 134 ++ ++ + + F + I+ R V + L Sbjct: 64 ESLQQLMNELGYPYFAVVDSAHVEDDYL-YTSPVVGISSRYPIESVQPVTPDSSLLAAFN 122 Query: 135 DSFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ---- 187 + + NR + +E+ +V+ + S S S Q Sbjct: 123 LGDNFSFNRTPIHATIELPHLGSTDCYVVHFKSQRPTEPKVEPIKTSDSSSEQKPQSDTL 182 Query: 188 --------------------AQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 A+ L +I Q+ S P V+ GDFN+ + Sbjct: 183 IKLHQEQLGSWLSSVQRGLEAKLLHQYITNQRYLSDQPVVLMGDFNKPLFNNEFKGLLSY 242 Query: 227 TIDPNDSL-IRFPKEKDSRCN-----------------ANKNLRNKIPIDYFVMDQNAYK 268 +++ +++ + + + +DY +M Sbjct: 243 SLNRDETSQHWLSHFRLRDSWDLYHQLHEEDLLEQRKPTHYYGASGSVLDYILMSNEFDC 302 Query: 269 FLIQESFSEILYNEDD------IKSRGKRLSDHCPISID 301 Y D + +DH +S+ Sbjct: 303 QNSSSLMEISNYTVLDHHLINPSFEHDQFSTDHAVVSVT 341 >gi|294817222|ref|ZP_06775864.1| Putative endonuclease/exonuclease/phosphatase family protein [Streptomyces clavuligerus ATCC 27064] gi|294322037|gb|EFG04172.1| Putative endonuclease/exonuclease/phosphatase family protein [Streptomyces clavuligerus ATCC 27064] Length = 310 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 86/301 (28%), Gaps = 51/301 (16%) Query: 8 ALVFFLVPCTASV-AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 AL +P A A R+++WNI +++ R Sbjct: 39 ALFARSLPVEAPRDAVPNRVMTWNICN-------PCKESNASR--------AAEIARYAP 83 Query: 67 DIVFLQE--MGSYNAVAKVFPKNTWCIFYSTE----RLINHSKRDSNNDIHTAIAVRKKN 120 ++ LQE + + + +++ + A+ Sbjct: 84 QVIGLQEACVRDVEWIRQYLKSRYGLVYHVEYGTVLQHQGRCGGLPWRPGAFGQALLSAA 143 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 +S + +R + + + G+ + V + HL Sbjct: 144 PMTDHESVEYPDGG-----SEDRGYMAVTTTVGGRSVRVFNTHL-----------AQRRQ 187 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 ++ + Q + L + + + + ++ GDFN N + + ++ P Sbjct: 188 EAVRADQTRVLAAAVARHERA----IVLGDFNAVPNAPELTRIW--ELSADEKSPCGPSS 241 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQ----NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + C + + DY + L S +++ + + +S H Sbjct: 242 A-ADCEPTTDWQL--TFDYIFLRGMAPVEHGVHLTSYSDHHLVHTDVGAPGPTRPVSTHA 298 Query: 297 P 297 P Sbjct: 299 P 299 >gi|239624599|ref|ZP_04667630.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239520985|gb|EEQ60851.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 251 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 33/300 (11%), Positives = 73/300 (24%), Gaps = 78/300 (26%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 + +SWN+N L G + K +DAD+ +QE Sbjct: 3 KFISWNVNGLRACVGKGF---------------LDFFKEIDADVFCIQESKLQEG-QIDL 46 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + +++ + + A+ + + + D+ R Sbjct: 47 DLPGYHQYWNYALKKGY----------SGTAMFTREEPLSVSYGIGMEEHDTEGR----- 91 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ +V+ + + + + + L+ P Sbjct: 92 ----VITAEFPDYYVVTCYTPNSQDGLARLDYRMKWEDDFLAYLKGLEK--------KKP 139 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 V GD N + + + F Sbjct: 140 VVFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKFTDLLSAGFIDTFRYFYPDAEGIYS 199 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF + ++ L+ + + SDHCP+ + Sbjct: 200 WWSYRFSARAKNAGWRIDYFCVSESLKDRLVSAAIHTEV-----------MGSDHCPVEL 248 >gi|160876625|ref|YP_001555941.1| endonuclease/exonuclease/phosphatase [Shewanella baltica OS195] gi|160862147|gb|ABX50681.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS195] gi|315268822|gb|ADT95675.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS678] Length = 398 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 45/366 (12%), Positives = 92/366 (25%), Gaps = 88/366 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +++ S N+ E S + L ++ + DIV QE+ S + Sbjct: 30 IKIASINLFNFIEPPLAYYDFENIYSHGQWQKKCQWLSEFLAHRQPDIVGFQEVFSPEPL 89 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137 ++ + + ++ A+A R V + + S Sbjct: 90 KRIASEQG-LVHFAVIDAPTLISDYIYRSPVVALASRYPIVEISSVEPDARLVAAMGLSS 148 Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENT-------------------- 176 A +R+ + VE+ K +H KS +LE Sbjct: 149 EFAFSRKVLRATVEVPHIGKCDFYVVHFKSKRAGLALEPKLFEHQPLALDNLAPAASMKL 208 Query: 177 -------------YSPSCSLLSQQAQWL-KDWITQKKESLVPFVIAGDFNRKI------- 215 S +A L + +++ES P ++ GDFN + Sbjct: 209 HSETQLLTEQALGRWASTMQRGAEAALLFNGILVRRQESKHPVIVMGDFNDSLTMGALDA 268 Query: 216 --------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN--------------------- 246 + + F + + Sbjct: 269 LTIQGESIHSNDIKAAGLGHLSDAALAAVFAQYQLKDAYELCLEANQQDSLTGNTAYHRD 328 Query: 247 ----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKRLSDHC 296 + +DY ++ + + Y D R +DH Sbjct: 329 HRAATHYYGPKGSVLDYILLSSEFDASHGRSLAQVVDYQTCDRHLVRPEYERDAYSTDHA 388 Query: 297 PISIDY 302 P+ ++ Sbjct: 389 PVIVEL 394 >gi|154275224|ref|XP_001538463.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150414903|gb|EDN10265.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 769 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 40/358 (11%), Positives = 89/358 (24%), Gaps = 75/358 (20%) Query: 22 QKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +K +S+N + + + L+ K +ADIV LQE+ + Sbjct: 384 EKFTALSYNTLCDRSATHQQHGYAPSRALAWEYRRDLILNEIKGYNADIVCLQEIDQGSY 443 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL--- 131 + + + ++ + K + + + Sbjct: 444 HGFFREQLAYNDYKGVYWPKGRAQGMPEEEAKVVDGCATFFKGSKYILLEKNMIHFGQTA 503 Query: 132 -------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 G D ++R + + ++ ++G+++ V+++HL ++ + Sbjct: 504 VRRPDAKGQDDIYNRLWQKDNIAVVTYLENRLSGERLIVVNVHLYWDPAYKDVKLIQAAI 563 Query: 181 CSLLSQQAQWLKDWITQKKESLV---------------------------------PFVI 207 Q I + P +I Sbjct: 564 LMEEVTQLAEKYSKIPACTDKTAFRFSEPEHSTDGGGTATPVEPAPSVEYSSGSQIPLII 623 Query: 208 AGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NA 247 GDFN ++ + + F + Sbjct: 624 CGDFNSYPGSAVHELMSRGRLIEDHPDLEKRLYGNLSRVGMSYPFNLKSAYGAIGELDFT 683 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISIDYDF 304 N IDY NA + + Y + SDH + ++ F Sbjct: 684 NYTPDFADVIDYIWYTSNALQVTGLLGAVDKEYLQRVPGFPNYHFPSDHLALMAEFSF 741 >gi|119946323|ref|YP_944003.1| endonuclease/exonuclease/phosphatase [Psychromonas ingrahamii 37] gi|119864927|gb|ABM04404.1| Endonuclease/exonuclease/phosphatase [Psychromonas ingrahamii 37] Length = 1010 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 43/376 (11%), Positives = 95/376 (25%), Gaps = 94/376 (25%) Query: 20 VAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 + + ++N+ N + Q G R + + ++ADI+ L Sbjct: 468 QDGDLTIATFNVLNYFNSQLGGEPNPLDQNRGAESAEEFDRQASKIVTAIVAINADILGL 527 Query: 72 QEMGSY------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 E+ + N + + + ++ I + I + Sbjct: 528 MEIENNGFGESSAIIDLLNRLNANLDDTNQYSIAQPQTEDLTNGFVGSDAITSQIIFKAS 587 Query: 120 NVRVLQQS--------------YPLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDIH 163 V + Y ++ R A+ I G +K+ + H Sbjct: 588 KVSLETVRIIKMPEQHATPVTVYIDGQSETESGDNYMRDAITPTFSIAGSDEKLTISVNH 647 Query: 164 LKSFCFLDSLENTYSPS---------CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 LKS + +L A L + + + + +I GD N Sbjct: 648 LKSKGSPCWEDYKLQEGKDPDKQGSCENLRVSAAYQLGETMKNIEGNK---LIMGDLNSY 704 Query: 215 INYL---------------------------------GNNDDFWKTIDPNDSLIRFPKEK 241 N + D + + +++ Sbjct: 705 ANEDAIMVLTNRDNAPADYQLKAARNTYIGGPDGEGVELHGDAGAIMTESYGYANVIRDR 764 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR------------- 288 ++ +DY + + ++ + I +E + Sbjct: 765 HPESHSYSYNDEVGTLDYILASASLKDKIVDSMYWNINSSESSLFEYSTKYTGYLPKYDN 824 Query: 289 GKRLSDHCPISIDYDF 304 R SDH P + +F Sbjct: 825 AYRSSDHDPAIVVLNF 840 >gi|254780031|ref|YP_003058138.1| exodeoxyribonuclease III [Helicobacter pylori B38] gi|254001944|emb|CAX30201.1| Putative exodeoxyribonuclease [Helicobacter pylori B38] Length = 250 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++DAD+ +QE + + + Sbjct: 1 MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + + D R Sbjct: 42 QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINIEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++++++ + S + + + L+ Sbjct: 91 -----VITCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKDIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|301113758|ref|XP_002998649.1| transmembrane protein, putative [Phytophthora infestans T30-4] gi|262111950|gb|EEY70002.1| transmembrane protein, putative [Phytophthora infestans T30-4] Length = 493 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 92/299 (30%), Gaps = 31/299 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---YNA 79 K+R++S N L + T + + D ++V LQE+ N Sbjct: 45 KLRVLSLNAWGLP----------VAPKCTERAAKIASAISS-DFELVVLQEIWHMRERNI 93 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-----LGAK 134 V K+ + ++ + + T + V K + A Sbjct: 94 VISKAQKSGFHYYHYFNPAVGFPFPMGADSFGTGLLVLSKLPISNALYHSFSLSGRPYAL 153 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 N+ L VE +I V HL + + + Q+ L + Sbjct: 154 HESDFVANKGVGLLRVETPAGQIDVYVTHLLANYNVGGKPGPGDFYRGHRTGQSYELTQF 213 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIRFPKEK-DSRCNANKNL 251 I+ + + ++ GDFN + L D S N + Sbjct: 214 ISATNRNDLT-IVCGDFNSSPDCLELKVPKQLLSLRDAYTDTNDEDGLTFASPDNKYSHG 272 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEIL----YNEDDIKSRGKR--LSDHCPISIDYDF 304 + + +DY + K +S + + +RG++ LSDH + ++ F Sbjct: 273 EHPMRMDYVMY--KIEKRAKGDSDWHLEGSSIFKGFFTDARGEKTPLSDHFGVKAEFTF 329 >gi|226322793|ref|ZP_03798311.1| hypothetical protein COPCOM_00565 [Coprococcus comes ATCC 27758] gi|225208774|gb|EEG91128.1| hypothetical protein COPCOM_00565 [Coprococcus comes ATCC 27758] Length = 231 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 29/268 (10%), Positives = 67/268 (25%), Gaps = 63/268 (23%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + K DADI LQE V + ++++ + + A+ Sbjct: 2 DFFKEADADIFCLQETKMQEG-QLVLDLPEYHQYWNSAVKKGY----------SGTAIFT 50 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K + + D R ++ + + + + ++ + + + Sbjct: 51 KKEPLSVTYGLGIEEHDQEGR---------VITLEFEDFYFITVYTPNSQSELARLDYRM 101 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------LGNNDD 223 + L++ P + GD N Sbjct: 102 TWEDAFLAYLKKLEE--------TKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERA 153 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQES 274 + + + + + + IDYF + L Sbjct: 154 KFSALLDAGFIDTYRYFYPDKEGIYSWWSYRFKAREKNAGWRIDYFCTSKALESRLEDAK 213 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ SDHCP+ +D+ Sbjct: 214 ILTNVF-----------GSDHCPVELDF 230 >gi|126277963|ref|XP_001379263.1| PREDICTED: similar to APEX nuclease (multifunctional DNA repair enzyme) 1 [Monodelphis domestica] Length = 385 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 79/311 (25%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + + +++ SWN++ L + K DI+ LQE Sbjct: 120 TSPSGKSSTLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 164 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 +K+ P+ + + + S+ + ++ + + + + G Sbjct: 165 KCSE--SKLPPELQDLPGLTYQYWSSP----SDKEGYSGVGLLSRQCPLSVT----YGIG 214 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R V + ++ ++ + + + L Sbjct: 215 EEEHDQEGRVIVA-----EFEAFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGL--- 266 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 + P V+ GD N + + F + + F Sbjct: 267 -----SAKKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLTDSFR 321 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 A +DYF++ Q L Sbjct: 322 HLYPEAAYAYTFWTYMMNARAKNVGWRLDYFLLSQALLPALCDSKIRSKAL--------- 372 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 373 --GSDHCPITL 381 >gi|17545927|ref|NP_519329.1| hypothetical protein RSc1208 [Ralstonia solanacearum GMI1000] gi|17428222|emb|CAD14910.1| probable metal-dependent hydrolase protein [Ralstonia solanacearum GMI1000] Length = 289 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 87/306 (28%), Gaps = 54/306 (17%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGS-------- 76 +++WNI +G D + + A+ + + D++ LQE+ S Sbjct: 5 ILTWNIQWGRGADG-----------RVDLSRMLAEARAMGSFDVLCLQEVTSGFGHLPGQ 53 Query: 77 --YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + ++ ++ I + + A+ + + + L Sbjct: 54 PGEDQWQELAGALGQA--FTLIDGIALERHEGAQIRRFGNAIATRLPVLHVARHALPCPA 111 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D+ R A+E +V+ + V+ HL+ + + + + + Sbjct: 112 DA-GPTMPRMAIEAIVQAPFGPLRVVSTHLEYYSETQRIAQIDALRALHVEGCMRAAHPP 170 Query: 195 ITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + + PF VI GDFN K + +L + Sbjct: 171 TLGPEPTDGPFRPLAQTRATVICGDFNCKPDSKPKRLATVPFSHEAAALYDAWETAHGPT 230 Query: 246 NANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 D+ ++ + + + + + SDH Sbjct: 231 PQPPTFGVHDRTGWTEPAYACDFMLVSEPLKTRVTRVEVNSTT-----------QASDHQ 279 Query: 297 PISIDY 302 P ++ Sbjct: 280 PTLLEL 285 >gi|329964252|ref|ZP_08301353.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] gi|328525557|gb|EGF52600.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] Length = 369 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 92/337 (27%), Gaps = 77/337 (22%) Query: 3 RKYVLALVFFLVPCTA-------------SVAQKVRLVSWNINTLSEQEGVSLWKNSVKR 49 R +L L+ FL+ + +L+S+NI +G + Sbjct: 68 RSALLPLMGFLLCYSQIRTYLPINFRTDNPPEGSFKLLSYNIMGF---DGATRKDGKNP- 123 Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 + Y K ADI+ LQE + + + K+ + H+ Sbjct: 124 -------ILTYLKESGADILCLQEYATGGSSHHLSQKDVNLELKAYPYHRIHT-VGRGKG 175 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--- 166 IA K + + +V V+I G + +++ HL+S Sbjct: 176 HTNRIACYSKFPILSARILNYPS--------EYNGSVIYEVKIGGDTLTLINNHLESNKL 227 Query: 167 --------------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206 + L + + ++ + QA + I + Sbjct: 228 TKADKVVYEDMLKSPEKEKVKSGVRLLIRKLAEASAIRAPQADTIAHEIA--ASRHPYII 285 Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 + GDFN ++ + D F + + + ID + +N Sbjct: 286 VCGDFNDTPISYAHHTISRQLNDA------FTQSGRGLGISYNQNKFYFRIDNILTSRNL 339 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D SDH PI Sbjct: 340 ---------RTHNCTVDRSIKD----SDHYPIWCYIS 363 >gi|255325807|ref|ZP_05366899.1| exodeoxyribonuclease III [Corynebacterium tuberculostearicum SK141] gi|311740107|ref|ZP_07713940.1| exodeoxyribonuclease III [Corynebacterium pseudogenitalium ATCC 33035] gi|255297019|gb|EET76344.1| exodeoxyribonuclease III [Corynebacterium tuberculostearicum SK141] gi|311304803|gb|EFQ80873.1| exodeoxyribonuclease III [Corynebacterium pseudogenitalium ATCC 33035] Length = 269 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 28/294 (9%), Positives = 70/294 (23%), Gaps = 47/294 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WNIN + D D++ LQE + Sbjct: 1 MRIATWNIN----------------SVRTRTQRALNLISKHDIDVLCLQETKVKDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +A+ K + + Sbjct: 41 ------KFPREVFEDAGLHVTCHGLNQWNGVAIVSKEEPEDVFIGFPGQPGFAKDPEKPQ 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC-------SLLSQQAQWLKDWIT 196 + + + + +++ + + Y + Q++ L Sbjct: 95 DREARALGARIRGVEIWSLYVPNGREITDRHYDYKLDFLYHLARYAENHAQSKLLMSGDF 154 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL----- 251 F K + ++ ++ + + + + Sbjct: 155 NIAPRDEDVWDIEAFRGKTHVTEPERAAFQMLEEAGLEEVTRRFTEDQRYTYFDYKGMRF 214 Query: 252 --RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ID+ + + D ++ G + SDHCP+ DY+ Sbjct: 215 QKNEGMRIDFQLASAPLAQ-------HVTGAQVDMVERAGDKTSDHCPLLADYN 261 >gi|257452215|ref|ZP_05617514.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_5R] gi|317058758|ref|ZP_07923243.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_5R] gi|313684434|gb|EFS21269.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_5R] Length = 250 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 81/301 (26%), Gaps = 78/301 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + +Y + DADI LQE ++ Sbjct: 1 MKLISWNVNGIRACLKKGFM---------------EYFEAQDADIFCLQETKCSAGQVEL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + + D R Sbjct: 46 -DLKGYHQYWN----------YAVKKGYSGTAIFTKKEPISVSYGLGIEEHDQEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + L + Sbjct: 91 -----VITLEFEDFYMVTVYTPNSKNELERLDYRMIWEDEFRSYLAKLNE--------AK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + F R +A Sbjct: 138 PVVVCGDMNVAHEEIDLKNPKTNRRNAGFTDEERTKFTELLKAGFTDSFRYLYPDRLHAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + + + + + SDHCP++ Sbjct: 198 SWWSYRANARKNNTGWRIDYFVVSNDWKEQIQEAEIH-----------AEQEGSDHCPVA 246 Query: 300 I 300 + Sbjct: 247 L 247 >gi|254491940|ref|ZP_05105119.1| endonuclease/exonuclease/phosphatase family [Methylophaga thiooxidans DMS010] gi|224463418|gb|EEF79688.1| endonuclease/exonuclease/phosphatase family [Methylophaga thiooxydans DMS010] Length = 250 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 36/290 (12%), Positives = 84/290 (28%), Gaps = 48/290 (16%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 ++R++++N++ +R +ADI+ LQE+ ++ Sbjct: 2 SQNQLRILTYNLHKGFNTSN----------REFTLHPIRDALVATNADIMLLQEIQGAHS 51 Query: 80 VAKVFP-----KNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + + S ++K + H A+ K ++ + Sbjct: 52 EHGLTHQHWPKEPHFEFLASDVWPHYAYAKNAVYSVGHHGNAILSKYPLQSWENINVSPF 111 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + +R + +++ + I + +Q L + Sbjct: 112 TWA-----SRSLLHGEIKLPWSDDVLHIICIHLGLIG-----------MERRRQFVTLCE 155 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 I P ++AGDFN + ++ + F + + Sbjct: 156 RIDAHVPHDAPLIVAGDFNDWAGQAEKR--LSQHLNLKE---AFRTLHNRYARTWPSWMP 210 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +D E + E S RLSDH P+ ++ Sbjct: 211 VLKMDRIYYRG-----------MEPIICERPPHSTWNRLSDHAPLLASFE 249 >gi|325189144|emb|CCA23669.1| conserved hypothetical protein [Albugo laibachii Nc14] gi|325190842|emb|CCA25330.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 291 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 35/291 (12%), Positives = 75/291 (25%), Gaps = 27/291 (9%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 ++++++N+ + ++G W + I+ QE + Sbjct: 17 PQPGMPLKIMTFNLRYANTEDGPRGWIYRK-------DHVIDIINRYHPAIMGTQEGLAD 69 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + ER N + D ++ N + P + Sbjct: 70 QLDDIDKNLIHPYKRFGIEREPNGEHEEIFYDTSVVELIKGGNFWL--SETPDTFGTLGW 127 Query: 138 SRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R ++ + +V + + + A+ L D I Sbjct: 128 DADCVRLVTWCHFQLIETKQLFYVFNTQFDHVGAIS------------RQKAARLLWDRI 175 Query: 196 TQKKESLVPFVIAGDFN---RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + GDFN Y D + + K D C + Sbjct: 176 KTIAGTDAIVFTLGDFNTYRHDPTYKFFTQDEAGPMFQDAWTNATSKVGDVSCTYHAWEG 235 Query: 253 NKIPIDYFVMDQNAYKFLIQE-SFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ V+ N +L + + + G SDH P+ + Sbjct: 236 PAYHLENGVVGANHIDWLFSRPNLKVLETKVITEERNGFHPSDHYPMQTEI 286 >gi|322806100|emb|CBZ03667.1| endonuclease/Exonuclease/phosphatase family protein [Clostridium botulinum H04402 065] Length = 327 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 101/311 (32%), Gaps = 44/311 (14%) Query: 22 QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +V++NI G +S ++T + + + K ++ +FLQE Sbjct: 28 DSFSIVTFNIGYGGMDDKQDFFMDGGKGSRSSSKEKTMENMRGITSFLKKDNSSFIFLQE 87 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV------LQQS 127 + + + + F + + ++ + + S + + + K + V L + Sbjct: 88 VDTNS--TRSFRIDQYDYLKNSLKAYSSSMALNYKTPWVPVPILKPHGTVNAGLVNLSKY 145 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 + + + ++ + V + + ++S + Y + QQ Sbjct: 146 KINSATRYQYPGKESWPRQLAELDRCFLESRVSLENNRELVLINSHLSAYDKGGKIRKQQ 205 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---------NDDFWKTIDP--NDSLIR 236 +LK++I ++ + ++ GD+N I D K + + Sbjct: 206 LSFLKNYIIKEYKKGNYIIVGGDWNHLILGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKW 265 Query: 237 FPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID F++ N ++ Y+ + + Sbjct: 266 VADKNVPTTRTDATPYKKGENFTAVIDGFLVSDNIEATSVKA------YSMEFKNT---- 315 Query: 292 LSDHCPISIDY 302 DH P+ +++ Sbjct: 316 --DHNPVKMEF 324 >gi|302670430|ref|YP_003830390.1| endonuclease/exonuclease/phosphatase family protein [Butyrivibrio proteoclasticus B316] gi|302394903|gb|ADL33808.1| endonuclease/exonuclease/phosphatase family protein [Butyrivibrio proteoclasticus B316] Length = 362 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 31/315 (9%), Positives = 93/315 (29%), Gaps = 32/315 (10%) Query: 16 CTASVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 ++ +WNI G ++ R + + + + ++ D Sbjct: 47 NPTVTGKEYTFATWNIGYGALGDNADFFMDGGKMVYSADESRVRENLSEIAKRVDAINPD 106 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 + +QE+ ++ + + + + + N + + + + + Sbjct: 107 FLVMQELDRNSSRSYFIDELERLKSEGESDVFKYQSSFAPNFNVSFVPL--PVPPIGRVL 164 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS---------LENTYS 178 + R A+ + + + L + ++ L Sbjct: 165 AGETTYSSHETSLAERVALPCPFKWPLRTFNLKRCLLVTRYPVEESDRELVIINLHLEAY 224 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 S Q LK+ + + ++AGDFN+ + + + + ++ Sbjct: 225 DSGEGKIAQTNMLKELMDNEVAKGNYIIVAGDFNQTFSNIDLSK--YPVLEGKWEAGIIN 282 Query: 239 KEKDSRCNANKNLR---NKIPIDYFVM-----DQNAYKFLIQESFSE---ILYNEDDIKS 287 E S + +D ++ ++++ + + I N + + Sbjct: 283 TEDFSSTFSFLYDDTYPTCRSLDRVLIDAEDKSPESFQYYMLDGCIVSDNIQVNHVETIN 342 Query: 288 RGKRLSDHCPISIDY 302 + SDH P+ + + Sbjct: 343 TEFKCSDHNPVVVKF 357 >gi|297157838|gb|ADI07550.1| putative exodeoxyribonuclease III [Streptomyces bingchenggensis BCW-1] Length = 265 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 77/306 (25%), Gaps = 71/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81 + + + N+N L + AD+V LQE+ + A Sbjct: 2 LTVTTVNVNGLRAAAKKGFLP---------------WLGGTAADVVCLQEVRAEPGELTA 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 V + W ++ ++ +AV + + D R Sbjct: 47 PVREPDGWHTVHAP----------ADTKGRAGVAVYTRREPEGVRVGFGSAEFDGSGR-- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 L V++ G + V ++L S + + L++ Sbjct: 95 -----YLEVDLPG--VTVASLYLPSGEVGTERQEEKERFMGEFLPYLKELRERA---AAG 144 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ GD+N + D + K Sbjct: 145 GREVLVCGDWNIAHREADIKNWKANRKKSGFLPEERAWLSRVYDEAAYVDVVRKLHPDAE 204 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + ID V Q + ++ + S +R SDH Sbjct: 205 GPYSWWSYRGRAFDNDAGWRIDLLVGTQGLAERAVKAQV-------ERAASYDQRWSDHA 257 Query: 297 PISIDY 302 P++ + Sbjct: 258 PVTAVF 263 >gi|85703387|ref|ZP_01034491.1| exodeoxyribonuclease III, putative [Roseovarius sp. 217] gi|85672315|gb|EAQ27172.1| exodeoxyribonuclease III, putative [Roseovarius sp. 217] Length = 262 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 69/306 (22%), Gaps = 71/306 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L +WNIN++ +EG+ + + + DI+ LQE S Sbjct: 2 PFTLATWNINSVRLREGL----------------VARLMQEEMPDILCLQECKSPVDKMP 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + L + +A+ K + G + AG Sbjct: 46 L---------EAFAALGYRHVVARGQKGYNGVAILSKLPMAEVGAMDFAGLGHARHIAGQ 96 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 NG I + D + + ++DW + Sbjct: 97 --------LENGTVIH----NFYVPAGGDIPDRAVNDKFGQKLDYLTEMRDWFRDSRPEK 144 Query: 203 VPFVIAGDFNRKINYLGN--NDDFWKTID-------------PNDSLIRFPKEKDSRCNA 247 ++ GD N + K + + Sbjct: 145 S--ILVGDLNIAPREDDVWNHKQLLKIVSHTPVEVEHLGDVMEAGGWQDVTRADIPEGQL 202 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + SDH P Sbjct: 203 YSWWSYRASDWDAANKGRRLDHVWASGDIRAAAHSS-------RILRGARGWDQPSDHAP 255 Query: 298 ISIDYD 303 + +D Sbjct: 256 VFATFD 261 >gi|237797954|ref|ZP_04586415.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020805|gb|EGI00862.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 291 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 37/292 (12%), Positives = 82/292 (28%), Gaps = 58/292 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 ++RL+S+NI + + + + + + D D+V L Sbjct: 30 PEDGRLRLLSFNIQVGISTQRYHHYLTRSWQHLLPHGGRAGNLQKIGELIN--DFDLVAL 87 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE+ + + + R+ + V + + +PL Sbjct: 88 QEVDGGSMRSGFVNQVEHLAQLGGFPYWYQQLNRNLGRLAQHSNGVLSRLRPAKIEDHPL 147 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G R A+ + + V+ +HL ++Q + Sbjct: 148 PGPAG-------RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQLAY 187 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 +++ I V+ GD N N L + + + Sbjct: 188 IRELIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 233 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + +D+ ++ +Q I SDH P++++ Sbjct: 234 WRPQRCLDHILLSPTLTLERVQVLAQPI--------------SDHLPVAVEI 271 >gi|283798597|ref|ZP_06347750.1| exodeoxyribonuclease III [Clostridium sp. M62/1] gi|291073681|gb|EFE11045.1| exodeoxyribonuclease III [Clostridium sp. M62/1] Length = 324 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 35/318 (11%), Positives = 77/318 (24%), Gaps = 61/318 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L++ N ++L E++ + + D++ LQE+ + Sbjct: 1 MKLLTLNTHSLEERD-----------YEKKLKIFTEEILKEKPDVIALQEVNQPLDGEEA 49 Query: 84 FPKNTWCIFYSTER-------------------------------LINHSKRDSNNDIHT 112 + + S + Sbjct: 50 DGEVLKKSGFIPCPSEPPSCAVPVRLGNHGLRAAQLLRRSGFPVFWTWTSAKVGYGKYDE 109 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 +A+ + L +D + R+A+ + + I + V + + D Sbjct: 110 GMALMSRRPIAEVSQLFLTDGRDYNNWK-TRKALAITLNIGKGEEPVSFVTAHMGWWKDE 168 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 E Q + L + + GDFN + + G D D Sbjct: 169 EEPFSR--------QWERLDAF-ASSLRRRADVWLMGDFNTQDSVRGEGYDRITASGWTD 219 Query: 233 SLIRFPKEKDSRCNANKNLRNKI-------PIDYFVMD--QNAYKFLIQESFSEILYNED 283 + K + IDY ++ + Sbjct: 220 AYRAAGKRDGGITVPGAIDGWREDGEVPGMRIDYIWYGRKHDSGDRKSRGDVLIEEVRTV 279 Query: 284 DIKSRGKRLSDHCPISID 301 S +SDH + + Sbjct: 280 FNGSDCPVVSDHFGVLAE 297 >gi|116619520|ref|YP_821676.1| endonuclease/exonuclease/phosphatase [Candidatus Solibacter usitatus Ellin6076] gi|116222682|gb|ABJ81391.1| Endonuclease/exonuclease/phosphatase [Candidatus Solibacter usitatus Ellin6076] Length = 234 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 36/282 (12%), Positives = 76/282 (26%), Gaps = 63/282 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++N++ +G + + L AD++ LQE+ ++A Sbjct: 11 LRVATYNVHKCRGMDGRVSP-----------HRIGRVLNELKADVIGLQEVLGHHAEIIA 59 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + V + ++Y L R Sbjct: 60 AEMKMGFALGENRRHQGAA---------YGNVVLSRFPIRSTRNYDLTVEG-----REQR 105 Query: 144 RAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + ++++G + + ++HL + + + LL A Sbjct: 106 GCLRADIDVHGSGVLHIFNVHLGTAWPERRHQGRRLVAAELLGDIAL------------D 153 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR--NKIPIDYF 260 P V+ GDFN + + K + + +D+ Sbjct: 154 SPRVLIGDFNEWT-------------RGLATKLLRSHMKTANFRWRSYPGLLPVLHLDHI 200 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D +Q SDH P+ D+ Sbjct: 201 YYDPALSLHRVQV----------HRSPLSLLASDHLPLFADF 232 >gi|330720429|gb|EGG98744.1| Endonuclease/exonuclease/phosphatase family protein [gamma proteobacterium IMCC2047] Length = 242 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 30/252 (11%), Positives = 67/252 (26%), Gaps = 47/252 (18%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 + + D+V LQE + + + S + + Sbjct: 29 ENLDSIANMLAGF--DVVALQEADGGSIRTGHLNQVKYLAEMSGFP-----YWYQQLNRN 81 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 + N + + L+ R R A+ + + + + +HL Sbjct: 82 LGRFAQHSNGLLSRVKPELIADHKLPGRLPGRGAIFMRYGKEDESLVFVVLHLSLG---- 137 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 Q L ++ + VI GD N K + + Sbjct: 138 ------------RRAQLDQLA-YVKELIADHKHVVIMGDLNTCAE---------KILHLS 175 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + N + R +D+ ++ + + Y Sbjct: 176 PLRDAKFQSPEGAGNTYPSWRPVSNLDHILVSPDLRVK----WAEVVPY----------A 221 Query: 292 LSDHCPISIDYD 303 LSDH P++++ + Sbjct: 222 LSDHLPLAVEIE 233 >gi|225620509|ref|YP_002721766.1| exodeoxyribonuclease [Brachyspira hyodysenteriae WA1] gi|225215328|gb|ACN84062.1| exodeoxyribonuclease [Brachyspira hyodysenteriae WA1] Length = 261 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 76/301 (25%), Gaps = 70/301 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++SWN+N + L + K + DI+ LQE A + Sbjct: 4 LKIISWNVNGIRAAYKKG---------------LVDFIKKENPDIICLQE---TKAFEEQ 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P++ I + ++ +A+ K + L FS R Sbjct: 46 LPEDLRNIEGYELFINPADPEV--KKGYSGVAIYTKLKPNKEIKNKLGS---KFSDREGR 100 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +++ + + +++ L + Sbjct: 101 I-----LSLEFDDFTIFNVYFPNGGKSEEHFQYKLSFYDEITKHLSKL--------KKNT 147 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNANK 249 ++ GD N + N + Sbjct: 148 NVILCGDMNIAHEAIDLARPKENEKSIGFLPEEREKITEFLNKGFTDTFRMFVKEGGHYS 207 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 K IDYF ++ + + SDHCPI I Sbjct: 208 WWDMKTRSREKNVGWRIDYFFVNNEMAPNIKRADILT-----------DVMGSDHCPILI 256 Query: 301 D 301 + Sbjct: 257 E 257 >gi|224282700|ref|ZP_03646022.1| exodeoxyribonuclease [Bifidobacterium bifidum NCIMB 41171] gi|313139858|ref|ZP_07802051.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] gi|313132368|gb|EFR49985.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] Length = 285 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 32/282 (11%), Positives = 71/282 (25%), Gaps = 42/282 (14%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNA-VAKVFPKNTWCIF----YSTERLINHSKRDS 106 + + +A DI +QE+ + + +F + + + + + Sbjct: 15 AKRKGIETWAGEHAPDIWCMQEVRAPQDELDPIFGEFGFEYATAGKIADQSELTAMNEVC 74 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 + + ++ +D S R + G I V +++ + Sbjct: 75 RVKGRAGVGLLTDLPVTARRYGLPGLDEDVDS---GRWIEADVTTPQGYGITVACVYVHA 131 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN---------- 216 D ++ L + + + V+ GDFN Sbjct: 132 GNSDDPVKMAQK--YRFLDTMLTRMGELRDEASRGGRQAVLCGDFNIAHTPLDIKNAKAN 189 Query: 217 ------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFV 261 + + + + + IDY Sbjct: 190 IKHAGFLPAERAYVDRWLGEYEFVDVIRSLAGDIQGPYTWWSQRGRAFDNNVGWRIDYQF 249 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + D S R SDH P++I YD Sbjct: 250 ATPELAE-------TARGFVIDKAPSYDARWSDHAPLTITYD 284 >gi|217034282|ref|ZP_03439699.1| hypothetical protein HP9810_885g13 [Helicobacter pylori 98-10] gi|216943254|gb|EEC22719.1| hypothetical protein HP9810_885g13 [Helicobacter pylori 98-10] Length = 250 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++DAD+ +QE + + + Sbjct: 1 MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + + D R Sbjct: 42 QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINMEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + ++++++ + S + + + L+ Sbjct: 91 -----VVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFRKFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|146286032|sp|A1YES6|APEX1_GORGO RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName: Full=APEX nuclease; Short=APEN; AltName: Full=Apurinic-apyrimidinic endonuclease 1; Short=AP endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox factor-1; Contains: RecName: Full=DNA-(apurinic or apyrimidinic site) lyase, mitochondrial gi|120974134|gb|ABM46644.1| APEX1 [Gorilla gorilla] Length = 318 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 38/315 (12%), Positives = 76/315 (24%), Gaps = 82/315 (26%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +++ SWN++ L + K DI+ LQE Sbjct: 53 TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97 Query: 75 GSYN----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 A + P ++ + + +S + R+ ++V Sbjct: 98 KCSENKLPAELQELPGLSYQYWSAPXXKEGYSG--------VGLLSRQCPLKVS------ 143 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G + R V ++ ++ + + + Sbjct: 144 YGIGEEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRRFLKG 198 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSL 234 L S P V+ GD N + + F + + Sbjct: 199 LA--------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLA 250 Query: 235 IRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 F + A +DYF++ + L Sbjct: 251 DSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL----- 305 Query: 286 KSRGKRLSDHCPISI 300 SDHCPI++ Sbjct: 306 ------GSDHCPITL 314 >gi|255325901|ref|ZP_05366993.1| endonuclease/exonuclease/phosphatase [Corynebacterium tuberculostearicum SK141] gi|255297113|gb|EET76438.1| endonuclease/exonuclease/phosphatase [Corynebacterium tuberculostearicum SK141] Length = 913 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 40/340 (11%), Positives = 91/340 (26%), Gaps = 68/340 (20%) Query: 22 QKVRLVSWNINTLSE---------------------QEGVSLWKNSVKRTTSDYTLLRQY 60 + + ++N+ G + + + Sbjct: 489 GEYTIGAFNVLNYFTSLGEEFGGSAYTDREGNKVTVNRGKTRGAYTQSALEDQERKIVAA 548 Query: 61 AKNLDADIVFLQEMGS------------------YNAVAKVFPKNTWCIFYSTERLINHS 102 LDAD++ L E+ + + W S Sbjct: 549 INGLDADVIGLSEIEDGYAVTGDFAQRDKALKHLTEKLNEAAGSEKWAFVPSPSEDAVPD 608 Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 S + I TA K V+ + +S + + + ++ + + Sbjct: 609 ---SPDVIRTAFIYHKDVVKPVGESRIFQDDRFTGTAREPLAQEFQPLKEGEESFVAVAN 665 Query: 163 HLKSFC----FLDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINY 217 H KS + + ++ + QAQ + D + ++++ P GDFN + Sbjct: 666 HFKSKGSVAKGDADSGDGQGNNPNVRNAQAQAVLDALHKQEDWKDKPLFALGDFNTYTHE 725 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 + + K + + + +D+ + ++ A L Sbjct: 726 T-----ALDVFRNDGFTVPAEKYEADP--SYQFSGLLGTLDHVLANKVATGTLDDAQVWN 778 Query: 278 ILYNEDDIKSRGKR--------------LSDHCPISIDYD 303 I +E +R SDH P+ + + Sbjct: 779 INADEPVAFEYSRRNYNIVDFYDDSPFRASDHDPVKVGFT 818 >gi|319427362|gb|ADV55436.1| Endonuclease/exonuclease/phosphatase [Shewanella putrefaciens 200] Length = 396 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 45/371 (12%), Positives = 92/371 (24%), Gaps = 93/371 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +++ S N+ E S + L ++ + DIV QE+ S + Sbjct: 23 IKIASINLFNFIEPPLAYYDFENIYSHGQWQKKCQWLSEFIAHRQPDIVGFQEVFSPEPL 82 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137 ++ + +++ A+A R V + + S Sbjct: 83 KRIAREQG-LGYFAVVDEPTLISDYIYRSPVVALASRYPIVEISSVEPDTRLVAAMGLSS 141 Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENT-------------------- 176 A +R+ + VE+ K +H KS +LE Sbjct: 142 EFAFSRKVLRATVEVPHIGKCDYYVVHFKSKRAGLALEPKLFEHQPLGHQPLSLDNLAPA 201 Query: 177 ------------------YSPSCSLLSQQAQWL-KDWITQKKESLVPFVIAGDFNRKI-- 215 S +A L + +++ES P ++ GDFN + Sbjct: 202 VSMKLHSETQLLTEQALGRWASTMQRGAEAALLFNGILVRRQESKHPVIVMGDFNDSLTM 261 Query: 216 -------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN---------------- 246 + + F + + Sbjct: 262 GALDALTIQGESIHSNDIKAAGLGHLSDAALAAVFAQYQLKDAYELFIEANLRDSLTGNT 321 Query: 247 ---------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKR 291 + +DY ++ + + Y D R Sbjct: 322 AYHREHRAATHYYGPKGSVLDYILLSSEFDASHGRSLAQVVDYQTCDRHLVRPEYERDAY 381 Query: 292 LSDHCPISIDY 302 +DH P+ ++ Sbjct: 382 STDHAPVIVEL 392 >gi|30585287|gb|AAP36916.1| Homo sapiens APEX nuclease (multifunctional DNA repair enzyme) 1 [synthetic construct] gi|60653967|gb|AAX29676.1| APEX nuclease 1 [synthetic construct] Length = 319 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +++ SWN++ L + K DI+ LQE Sbjct: 53 TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K+ + S + S+ + ++ + + + + G Sbjct: 98 KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R V ++ ++ + + + L Sbjct: 148 EEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ + L Sbjct: 255 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 306 --GSDHCPITL 314 >gi|125490347|ref|NP_001074954.1| DNA-(apurinic or apyrimidinic site) lyase [Pan troglodytes] gi|146286033|sp|A1YFZ3|APEX1_PANPA RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName: Full=APEX nuclease; Short=APEN; AltName: Full=Apurinic-apyrimidinic endonuclease 1; Short=AP endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox factor-1; Contains: RecName: Full=DNA-(apurinic or apyrimidinic site) lyase, mitochondrial gi|146286034|sp|A2T6Y4|APEX1_PANTR RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName: Full=APEX nuclease; Short=APEN; AltName: Full=Apurinic-apyrimidinic endonuclease 1; Short=AP endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox factor-1; Contains: RecName: Full=DNA-(apurinic or apyrimidinic site) lyase, mitochondrial gi|219474|dbj|BAA02633.1| APEX nuclease [Homo sapiens] gi|1710232|gb|AAB50212.1| apurinic/apyrimidinic endonuclease [Homo sapiens] gi|12803075|gb|AAH02338.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens] gi|14198174|gb|AAH08145.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens] gi|17939646|gb|AAH19291.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens] gi|30583311|gb|AAP35900.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens] gi|61358640|gb|AAX41599.1| APEX nuclease 1 [synthetic construct] gi|61362429|gb|AAX42220.1| APEX nuclease 1 [synthetic construct] gi|61362434|gb|AAX42221.1| APEX nuclease 1 [synthetic construct] gi|121483845|gb|ABM54218.1| APEX1 [Pan paniscus] gi|123981822|gb|ABM82740.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [synthetic construct] gi|123996645|gb|ABM85924.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [synthetic construct] gi|124111123|gb|ABM91939.1| APEX1 [Pan troglodytes] gi|208965824|dbj|BAG72926.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [synthetic construct] gi|1090503|prf||2019234A APEX nuclease Length = 318 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +++ SWN++ L + K DI+ LQE Sbjct: 53 TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K+ + S + S+ + ++ + + + + G Sbjct: 98 KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R V ++ ++ + + + L Sbjct: 148 EEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ + L Sbjct: 255 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 306 --GSDHCPITL 314 >gi|332882499|ref|ZP_08450117.1| exodeoxyribonuclease III [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332679559|gb|EGJ52538.1| exodeoxyribonuclease III [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 255 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 85/303 (28%), Gaps = 73/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+N+N + ++ K+ + D++ LQE+ K Sbjct: 1 MKIISYNVNGIRAALTKGF---------------TEWLKSANPDVLCLQEI-------KA 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + ++ +A+ K + +G + R Sbjct: 39 LEAQIPTEVFTELGYTYQYYHSAEKKGYSGVAILSKIKP----KHVEVGTGIDYMDKEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + V+ ++L S D + +I + K+++ Sbjct: 95 -----VLRADFDTLSVMSLYLPSGTNPD--------RLDFKLTFMADFQKYIDKLKQTIP 141 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249 VI GD+N + +D I + + Sbjct: 142 NLVICGDYNICHEAIDIHDPVRNATVSGFLPIEREWLDKFMKSGFIDSFRYFHKEPHQYS 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY ++ + + + SDHCPI + Sbjct: 202 WWSYRANARNNNKGWRIDYHLVSAPLENRMERALIL-----------PEAKHSDHCPIVL 250 Query: 301 DYD 303 + Sbjct: 251 EVS 253 >gi|331702430|ref|YP_004399389.1| exodeoxyribonuclease III Xth [Lactobacillus buchneri NRRL B-30929] gi|329129773|gb|AEB74326.1| exodeoxyribonuclease III Xth [Lactobacillus buchneri NRRL B-30929] Length = 256 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 33/302 (10%), Positives = 72/302 (23%), Gaps = 78/302 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + + LDAD +QE Sbjct: 1 MKFISWNVNGLRAAVKHDF---------------AETFQQLDADFFCIQETKMQEG-QLE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S + P+ S + Sbjct: 45 LDLPGYQQYFNYAERKGYSGTAIFT-----------------KHAPMHVTYGINSDEFDH 87 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E +++ ++ + + Q L ++ Sbjct: 88 EGRAITLEYPD--FYLVTSYVPNSGAGLKRLDFRMGWNKAFYQYLTEL--------DAKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + F + + Sbjct: 138 PVILCGDLNVAHKEIELKNPQSNHHNAGFTDEERQDFTKLLKAGFMDTFRHFYPDQTDIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV + ++ SDHCP+ Sbjct: 198 SWWSYRFHSRDRNAGWRIDYFVASNRLADQIEDSKILTDVF-----------GSDHCPVE 246 Query: 300 ID 301 +D Sbjct: 247 LD 248 >gi|328870805|gb|EGG19178.1| transcription factor IIIC-gamma subunit [Dictyostelium fasciculatum] Length = 1238 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 77/315 (24%), Gaps = 71/315 (22%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 A + ++++VSWN+ Y DIV LQE Sbjct: 105 FTTPAVSSNQIKIVSWNVAGFGACTKKGFK---------------DYLIKEQPDIVCLQE 149 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + AVAKV + H H A+ K + S + Sbjct: 150 --TKIAVAKVPKSEIPEGYTY------HFNPCIEKTGHHGTALLTKIKPISITSGIGISK 201 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 D R +V + +V++ ++ + +++ Sbjct: 202 HDQEGR---------VVTAEFEDFYVVNAYVPNSGVDRKEPLKRLG---YRTKEWDVDFF 249 Query: 194 WITQKKESLVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFP 238 + P V GD N + + + + Sbjct: 250 KYMSDLNTKKPVVWCGDLNVAHTEIDLANPKSNSRTAGFTIEERTSFSGHLNSGFIDTHR 309 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + +DYF++ + + Sbjct: 310 HFNPGKTGTYTFWSYMGGARAKNAGWRLDYFIVPATFIGSIAASFIRSKV---------- 359 Query: 290 KRLSDHCPI-SIDYD 303 + SDHCPI ID + Sbjct: 360 -QGSDHCPIGIIDLE 373 >gi|297171763|gb|ADI22754.1| metal-dependent hydrolase [uncultured Rhizobium sp. HF0500_29J11] Length = 248 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 78/280 (27%), Gaps = 52/280 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 R+ S+NI K+ + LDADIV LQE+ ++ Sbjct: 2 FRVASYNIR-----------KSVGTDWRRRPKQILDVLTELDADIVALQEV-DRRLGDRL 49 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + I T + + + L + L+ R Sbjct: 50 SSLSPGLIAEMTHFRPIRFGVRPGSLGWHGNTILVRKDVELLRRKRLV-----LPALEPR 104 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A ++I KI V+ +HL +QA+ + D + E + Sbjct: 105 GAALADLQIGDLKIRVVGMHLGLVGLW-------------RKRQARAVLDQLAS-LEEPL 150 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 P V+ GD N+ W T + + + + + D + Sbjct: 151 PTVMMGDLNQ-----------WNTEGGCLAHFAEDHHVIAPGLSFHSQMPFVSFDRIITS 199 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + R + SDH P+ D Sbjct: 200 LDIHVDAAAV----------HSSERARLASDHLPVWADLS 229 >gi|312885260|ref|ZP_07744937.1| hypothetical protein VIBC2010_03195 [Vibrio caribbenthicus ATCC BAA-2122] gi|309367067|gb|EFP94642.1| hypothetical protein VIBC2010_03195 [Vibrio caribbenthicus ATCC BAA-2122] Length = 452 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 41/289 (14%), Positives = 81/289 (28%), Gaps = 34/289 (11%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + +R+ ++N+ + + S+ + D++ QE S Sbjct: 181 TRDNTLRVATYNLWMIPAVSSDISARTSLMDHSL-----------SGYDVLAFQEAFSNR 229 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 ++F + Y T+ L DS + + + Y + S Sbjct: 230 -RNRLFDDLSEEYPYQTQVLGG----DSGALYDGGVVTLSRYPILEA-DYLVFDHCSSTD 283 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 ++ V +E NG+ V + HL SF + L + +T+ Sbjct: 284 CHADKGIVYTKIEKNGQIYHVFNTHLASFGTRKAKRLRRLQLGLLRTF-------MLTKN 336 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA---------NK 249 + AGDFN N + +I + + Sbjct: 337 IPEDEAVIYAGDFNVDKNNHFSEYQLMLSILEVEPPTFA-GYTQGTFDPSINKYAAAKYS 395 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 N +DY + + + + D LSDH + Sbjct: 396 GGTNTSYLDYVFTSKRHRPATQKLNTVRLKQRVSDSTWGEWHLSDHFSV 444 >gi|260578815|ref|ZP_05846722.1| 5'-nucleotidase family protein [Corynebacterium jeikeium ATCC 43734] gi|258603113|gb|EEW16383.1| 5'-nucleotidase family protein [Corynebacterium jeikeium ATCC 43734] Length = 928 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 42/332 (12%), Positives = 92/332 (27%), Gaps = 63/332 (18%) Query: 25 RLVSWNINTLSEQEGVSLWK----------------------NSVKRTTSDYTLLRQYAK 62 + S+N+ G S + + + Sbjct: 515 SIASFNVLNYFTDLGQDQGNCGSYKDREGNPVTADKCDVRGAYSEQAFKDQQAKIVKAIN 574 Query: 63 NLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 LD ++ L+E+ + A+ + + + + + I TA Sbjct: 575 TLDVSVLGLEEIQNSAKFGKDRDAALKHLVDELNAAGGKWEYVKSPATVAKNEDVIRTAF 634 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING----KKIWVLDIHLKSFC-- 168 + V + +S L R+ + + G + + H KS Sbjct: 635 IYQPDKVEPVGESKILDVEAFDQIA---RQPLAQQFKNKGAKDEQAFVAVVNHYKSKGSV 691 Query: 169 -FLDSLENTYSPSCSLLSQQAQ-WLKDWITQKKE-SLVPFVIAGDFNRKINYLGNNDDFW 225 D+ + + L + L W+++ + P I GDFN Sbjct: 692 ARGDADTGDGQGNNAKLRAEMSSQLVKWLSEDADFKDKPQFILGDFNAYAKEDAI----- 746 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + I+ K ++ + +D+ + ++ A + +I +E Sbjct: 747 RIIEEAGYTNLETKFDAG--HSYQFGGRVGSLDHVLANEKATEMATGADVWDINADESVA 804 Query: 286 KSRGK--------------RLSDHCPISIDYD 303 + R SDH PI + ++ Sbjct: 805 FEYSRRNYNVVDFYEPNVFRASDHDPIKVGFN 836 >gi|332304993|ref|YP_004432844.1| Endonuclease/exonuclease/phosphatase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172322|gb|AEE21576.1| Endonuclease/exonuclease/phosphatase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 391 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 43/388 (11%), Positives = 97/388 (25%), Gaps = 86/388 (22%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNI-----NTLS---EQEGVSLWKNSVKRTTSD 53 + K V L+ + A+ VR+ ++N+ N L G L++N Sbjct: 1 MYKVVGLLILLAGGSLVAQAKTVRIATYNVSMEASNYLPRGVSPVGNELFENLRHGDNQQ 60 Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKN---------------TWCIFYSTE-- 96 + + + + DI+ L E + K + FY+ Sbjct: 61 IRNIAEIIQRVRPDIILLNEFDYTSDDDKGVKAFINNYLLVSQQGNKRIDYPYFYTAPVN 120 Query: 97 ----------------RLINHSKRDSNNDIHTAIAVRKKNVR------------------ 122 + + + + Sbjct: 121 TGVASGVDLNHNGMSTDNGGDTFGFGLYPGQYGMLLLSRYPIQRDTIRTFQHFLWQDMPN 180 Query: 123 -------VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 S + R ++ ++ + ++ + + +L H F Sbjct: 181 GLLSSVKAEDGSDWYSPEAQAVFRLSSKSHWDVPITLHNQTVHILASHPTPPVFDGPENR 240 Query: 176 TYSPSCSLLSQQAQWL-----KDWITQKKE-----SLVPFVIAGDFNRKINYLGNNDDFW 225 + + ++ D++ K + FVI GD N N + Sbjct: 241 NGKRNHDEIRFWTDYISAGKVADYVYDDKGRKGGINSNQFVILGDLNASAKEGDGNKEGI 300 Query: 226 KTIDPNDSLIRFPKEKDSRC---------NANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 + N + + ++ DY + + + F Sbjct: 301 GGLLNNAKVNNHSVPHSEGGALHSPNNELGPSHTAFWRMRADYVIPSKALGEVTDSGVFW 360 Query: 277 EILYNEDDIKSRGKRL-SDHCPISIDYD 303 + R ++ SDH + +D D Sbjct: 361 PTPQDPLHRLIRDRQASSDHRLVWVDVD 388 >gi|325105846|ref|YP_004275500.1| exodeoxyribonuclease III Xth [Pedobacter saltans DSM 12145] gi|324974694|gb|ADY53678.1| exodeoxyribonuclease III Xth [Pedobacter saltans DSM 12145] Length = 255 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 37/299 (12%), Positives = 88/299 (29%), Gaps = 62/299 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+N+N + + + +AD+V LQE+ K Sbjct: 1 MKIISYNVNGIRAAINKGW---------------LDWLQATNADVVCLQEI-------KA 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P I +E +H + ++ A+ K+ + + + A D R Sbjct: 39 TPDQIQDIHKLSELGYHHFWYPAKKKGYSGTAILTKHEPLHVEYGCGIEAYDDEGR---- 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +K V+ + S D ++ + A L + Sbjct: 95 -----VIRADFEKFSVISAYFPSGSSGDERQHFKYQFLADFEIYAADLMNTYPNLLICGD 149 Query: 204 PFVIA---------GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + N + + I+ I + + + + Sbjct: 150 YNICHRAIDIHNPKSNANSSGFLPEEREWMERFINSG--FIDTFRHLNPDPHHYTWWSYR 207 Query: 255 ---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY ++ + + + + + SDHCPI ++ + Sbjct: 208 AGARAKNLGWRIDYHLLSSTMVENIKRAAIL-----------PEAKHSDHCPILLELQW 255 >gi|298244699|ref|ZP_06968505.1| Endonuclease/exonuclease/phosphatase [Ktedonobacter racemifer DSM 44963] gi|297552180|gb|EFH86045.1| Endonuclease/exonuclease/phosphatase [Ktedonobacter racemifer DSM 44963] Length = 343 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 37/300 (12%), Positives = 78/300 (26%), Gaps = 56/300 (18%) Query: 5 YVLALVFFLVPCTASV-----AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 + +L F T S + + ++WN + + G +RQ Sbjct: 84 ILFSLCFSPRLGTGSAQSIEGGRTITAMTWNFLGDNTRGGY----------------VRQ 127 Query: 60 YAKNLDADIVFLQEMG--SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 D++ LQE + + + + ++ S E + Sbjct: 128 LINTHHPDLIALQEADWNGIDEAQDILRQYPYHLYGSGEAPPGE-------------VLL 174 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176 + S + +++ G+ + V++ H S Sbjct: 175 STLPILDHGQVTAPDGSRSVWDIPR--ILWARLDLGHGQTLLVVNAHPISSINTVYGC-- 230 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 Q + L ++ + ++ GD N D D + + + Sbjct: 231 -LFCPQRRDSQVKALHQFLQPFIQHGERLLMLGDMNTTDREPAYQDLSAGLQDTHLLVGK 289 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 N+ + IDY + + + D R SDHC Sbjct: 290 GSGHSWGIRGLNQYWAF-LRIDYMFVTPK---------VKPLNLDTDCTS----RGSDHC 335 >gi|294678851|ref|YP_003579466.1| exodeoxyribonuclease III [Rhodobacter capsulatus SB 1003] gi|294477671|gb|ADE87059.1| exodeoxyribonuclease III-2 [Rhodobacter capsulatus SB 1003] Length = 262 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 29/306 (9%), Positives = 67/306 (21%), Gaps = 71/306 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L +WNIN L+ + D++ LQE S Sbjct: 2 SFTLATWNIN----------------SVRLREALVCKLMTEEAPDVLCLQECKSPVDK-- 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 F + L + +A+ K V + + Sbjct: 44 -------IPFAAFAELGYRYHVARGQKGYNGVAILSKLPMVEAGAGDYANLGHARH---- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + +E + + + ++ + D + + ++D + Sbjct: 93 ---IAGRLENG---VTIHNFYVPAG--GDIPDRAENEKFGQKLDFLSHMRD--DFHAQRP 142 Query: 203 VPFVIAGDFNRKINYLGN--NDDFWKTID-------------PNDSLIRFPKEKDSRCNA 247 ++ GD N + K + + + Sbjct: 143 DRAILVGDLNIAPREDDVWNHKALLKIVSHTPIEVEHLAAAQDAGGWVDVTRADIPEGQL 202 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + ++ SDH P Sbjct: 203 YSWWSYRSPDWDGADKGRRLDHIWATPDIAGAAHGS-------RILRAARGWEQPSDHAP 255 Query: 298 ISIDYD 303 + +D Sbjct: 256 VFATFD 261 >gi|327490155|gb|EGF21943.1| exodeoxyribonuclease [Streptococcus sanguinis SK1058] gi|332367237|gb|EGJ44972.1| exodeoxyribonuclease [Streptococcus sanguinis SK1059] Length = 322 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 88/325 (27%), Gaps = 56/325 (17%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 K VL V ++L+SWNI++L+ + + + Q + Sbjct: 28 KSVLNFVIINSVNFTRKGNFMKLISWNIDSLNAALTSDSARAQLS------QAVLQTLQA 81 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 +ADI+ +QE + S R+ + K Sbjct: 82 ENADIIAIQETKLSATGPTKKHLEILTYLFPDYENTWRSSREPARKGYAGTMFLYKKELT 141 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 ++P +GA + G + +E +G +V ++ + N + Sbjct: 142 PTVTFPEIGAPSTMDVEGR----IITLEFDG--FFVTQVYTPNAGDGLKRLNERQVWDAK 195 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWKTI 228 ++ L + P + GD+N R + + + Sbjct: 196 YAEYLASL--------DEQKPVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNL 247 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEI 278 F N + IDY++ + + + Sbjct: 248 LAKGFTDTFRHLHGDIPNQYTWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDS 307 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303 + DH PI ++ + Sbjct: 308 GARQ-----------DHTPIVMEIE 321 >gi|281491447|ref|YP_003353427.1| endonuclease/exonuclease/phosphatase family protein [Lactococcus lactis subsp. lactis KF147] gi|281375165|gb|ADA64678.1| Endonuclease/exonuclease/phosphatase family protein [Lactococcus lactis subsp. lactis KF147] Length = 352 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 41/316 (12%), Positives = 84/316 (26%), Gaps = 55/316 (17%) Query: 21 AQKVRLVSWNI--------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 Q +++++NI GV + S S + D +Q Sbjct: 56 GQTYKMMTFNIGYGSYPPSFNFFMDGGVDVRAYSKSAVKSAIQEDIRLINKEKPDFGNIQ 115 Query: 73 EMGSYNAVAKVFPKNT--------WCIFYSTERLINHSKRDSNNDI---HTAIAVRKKNV 121 E+ ++ + + + + I + I K Sbjct: 116 EIDWQGDRSQQVNEPQMVRAGLPDYTSVLTQNYDSAYLFYPVTKPIGKAKSGIMTYSKYE 175 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLV---EINGKKIWVLDIHLKSFCFLDSLENTYS 178 Y L + RA + + + + KK + + HL +F Sbjct: 176 IESSTRYKLPIETNFNKFFDLDRAFSVSILPIKNSDKKFVIFNTHLSAFITDQ------- 228 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW------KTIDPND 232 + QQ L D + + + D+N + + + W + + Sbjct: 229 ---KIQKQQLLTLFDEMKKYVSKGDYVICGADYNHALAGKAHPELTWMKEFPTENLTKGM 285 Query: 233 SLIRFPKEKDSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 ++ R + ID F++ N IQ Sbjct: 286 RVVAPTNAPTVRSLDYAYDKKNPKNTFGIIDGFLVSNNIKDLKIQ------------TID 333 Query: 288 RGKRLSDHCPISIDYD 303 + SDH P+ +D+ Sbjct: 334 NQFKSSDHQPVVMDFS 349 >gi|284030755|ref|YP_003380686.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283810048|gb|ADB31887.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 242 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 32/285 (11%), Positives = 76/285 (26%), Gaps = 51/285 (17%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 S +R++S+N++ R D L + + D+ +QE ++ Sbjct: 2 STGPSLRVLSYNVH----------------RWGDDREALARVVRACAPDVALIQEAPTWW 45 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + + ++ + R + L A Sbjct: 46 GTRRKRRAMAATFGMTYVAAAARNAILVAGSTEVVESLHWRVWRPFVRRRLRLIATQLPG 105 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 AV V + G + ++ HL L+ + Sbjct: 106 -----GAVGGRVTLGGTDLALVVCHLGLHIRGRQH----------------ELEQVLRGC 144 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + +P+++ GD N + + + + + + + ID Sbjct: 145 RSFNLPYLLVGDLNEEPGGPVWDRLAAEGLTDLGVDVGPT---------YHSDNPERRID 195 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +I + ++ SDH P+ I+ Sbjct: 196 GAHLSPELSGRVIP-----LDTVAGVTRADLAAASDHLPLLIELT 235 >gi|47214833|emb|CAF95739.1| unnamed protein product [Tetraodon nigroviridis] Length = 317 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 82/285 (28%), Gaps = 29/285 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAV 80 +++ S+NI + +L + DI+ + E+ +V Sbjct: 4 TMKVASFNIQKFGKN---------KLSDPEVLNILVKIVCRY--DIILILEVVDVSGQSV 52 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 F + ++ + + + NV L SY Sbjct: 53 KLFFDALNKSSTKHHYSMKLSARLGRTRYKEQFLFLYRDNVVDLVGSYQFDDQVSEGGDV 112 Query: 141 GNRRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R L + ++ I + + E L Q K Sbjct: 113 FARDPYILRFRCPTTVLKDLVMIPVHTKPEDSEKELDELHDVFLNVTQ-----------K 161 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 +I GDFN Y+ N D I + + + +NKN I Sbjct: 162 WGTDNVMILGDFNADGAYVSNRDMKKIRIRSDKNFHWLIGDDVDTTASNKNSHTYDRI-- 219 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGK--RLSDHCPISIDY 302 V + + ++ S + ++ S + ++SDH P+ ++ Sbjct: 220 VVYGDDMLQAVVPNSAKTFNFQKEYRLSDEQALKISDHYPVEVEL 264 >gi|332263793|ref|XP_003280936.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like [Nomascus leucogenys] gi|332263795|ref|XP_003280937.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like [Nomascus leucogenys] gi|332263797|ref|XP_003280938.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like [Nomascus leucogenys] gi|332263799|ref|XP_003280939.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like [Nomascus leucogenys] Length = 318 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 76/311 (24%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +++ SWN++ L + K DI+ LQE Sbjct: 53 TSPSGKTATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K+ + S + S+ + ++ + + + + G Sbjct: 98 KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R V ++ ++ + L + + L Sbjct: 148 EEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEALRKFLKGLA-- 200 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ + L Sbjct: 255 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 306 --GSDHCPITL 314 >gi|260428526|ref|ZP_05782505.1| extracellular nuclease [Citreicella sp. SE45] gi|260423018|gb|EEX16269.1| extracellular nuclease [Citreicella sp. SE45] Length = 1183 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 44/374 (11%), Positives = 89/374 (23%), Gaps = 95/374 (25%) Query: 21 AQKVRLVSWNINTLSEQ-----------EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 +++ S+N+ + ++ L A+++ Sbjct: 810 GGTLQVASYNVLNFFTTLDDGALTGPDGDLDPRGADTAAEFERQADKLVGGILGSGAEVL 869 Query: 70 FLQEMGSY--------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 LQE+ + + + + + I T I V Sbjct: 870 ALQEIENNGSGEGSAIDTLTDRINAEDPGANFGYVDPTGSGGFIGTDAITTGIIYDAGAV 929 Query: 122 RVLQQSY-------------------PLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVL 160 +L + +G NR +V + N G+ V+ Sbjct: 930 TLLYSDFIAYEESSAAVTNALATTIADAIGYDFEAYDQSNRPSVAATFQDNSSGETFTVV 989 Query: 161 DIHLKSFC-----------------FLDSLENTYSPSCSL----------------LSQQ 187 H KS ++ + + Sbjct: 990 SSHFKSKGDSGLAALASAAEDHLAGGGTAITQADLDALYADANFDQGDGQGFWNGVRTDA 1049 Query: 188 AQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR- 244 A L +WI V+ GD N + +D + + Sbjct: 1050 AVELAEWIGTGYNGGGVSNVVMLGDMNSYAEEDPV-----QYLDDDAGFTDLIDAYIGQE 1104 Query: 245 -CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK------------- 290 + + +D +D F+ + I +E D+ S + Sbjct: 1105 EAYSYVFDGQQGTLDQGFVDDMLAGFVTGVTEWHINADEPDLLSYDESFVESAFYDAGVF 1164 Query: 291 RLSDHCPISIDYDF 304 SDH P+ + DF Sbjct: 1165 GSSDHDPLIVGLDF 1178 >gi|254481760|ref|ZP_05095003.1| endonuclease/exonuclease/phosphatase family protein [marine gamma proteobacterium HTCC2148] gi|214037889|gb|EEB78553.1| endonuclease/exonuclease/phosphatase family protein [marine gamma proteobacterium HTCC2148] Length = 255 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 79/286 (27%), Gaps = 50/286 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY---- 77 +++ ++++NI+ +R+ ADIVFLQE+ Sbjct: 6 KEIHILTYNIH----------KGYCSGNRRFMLESMRERITETGADIVFLQEIHGTAIKS 55 Query: 78 NAVAKVFPKNTWCIFYS----TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 A + F F + + A+ + + ++ + Sbjct: 56 EAKKRKFSYPDQPHFEYLADQAWPHFAYGQNAIYRKGDHGNAILSMHPFISWENIDVSIF 115 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 S +R + ++E+ KK + + + +Q Q L + Sbjct: 116 PRS-----SRSILHGVIELPHKKTRLHTLCVHLGLL-----------EQERREQLQTLTE 159 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 I Q P +IAGDFN D F + Sbjct: 160 RIDQHVPRDEPMIIAGDFND-----WRRRAENHLHDDLGLAELFVSLEGRHARTFPVWAP 214 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 +P+D L S + + LSDH + Sbjct: 215 LLPVDRVYFRG-----LKPISCRRL------ANGHWRDLSDHAALF 249 >gi|190574562|ref|YP_001972407.1| putative exodeoxyribonuclease III protein [Stenotrophomonas maltophilia K279a] gi|190012484|emb|CAQ46112.1| putative EXODEOXYRIBONUCLEASE III PROTEIN [Stenotrophomonas maltophilia K279a] Length = 263 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 73/303 (24%), Gaps = 70/303 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + +R+ ++N+N + L + D+V LQE Sbjct: 5 KTLRIATFNVNGIGT----------------RLPQLLDWLHRESPDVVALQE-------- 40 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +A+ + ++ L G Sbjct: 41 --LKATDAAFPAAALEQAGYGALWQGEARWNGVALLARGTMPVESRRRLPGEPKDTQSRY 98 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 AV ++ V ++L + + Y + + L E Sbjct: 99 LEAAVHGVI--------VGALYLPNGNPQPGPKFDYK------LRWMERLIRHARSLVEL 144 Query: 202 LVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCN 246 P ++ GDFN D D ++ + K Sbjct: 145 PHPALLLGDFNVIPTDADVYDPKAWRRDALFQPEVRDAFERLLAQGWTDALRKVHGDATI 204 Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ +++ + L D ++ SDH P Sbjct: 205 YTFWDYFRQHAERDRGLRIDHLLLNPVLAERLKDAGV-------DRWVRLQEKASDHAPA 257 Query: 299 SID 301 + Sbjct: 258 WVT 260 >gi|94987281|ref|YP_595214.1| exonuclease III [Lawsonia intracellularis PHE/MN1-00] gi|94731530|emb|CAJ54893.1| Exonuclease III [Lawsonia intracellularis PHE/MN1-00] Length = 259 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 75/304 (24%), Gaps = 74/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL SWNIN W + +DI+ LQE KV Sbjct: 5 LRLTSWNINGFRAIIKKPHW---------------NWFHENQSDIIALQE-------TKV 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P E +++ ++ +AV K + + + + R Sbjct: 43 DPSQLQDNLQKPEGWLSYWSASIKKKGYSGVAVFSKPKPLAVTA----ELPNPTFQGEGR 98 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++I+ + D + A+ Sbjct: 99 L-----LHLEYPSFHFMNIYFPNGTQGDHRLSYKLGYYDSFLNYAEE--------ARKTK 145 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GDFN +L + + F N Sbjct: 146 PIVVCGDFNTAHRPIDLARPKANEETSGFLPIERTWMDRFIAAGYIDTFRYVHGDIPNNY 205 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF + + D + SDHCP+ Sbjct: 206 SWWSYQQRARERNVGWRIDYFFVS-----------IELMPTIRDAWIEMDIQGSDHCPVG 254 Query: 300 IDYD 303 + + Sbjct: 255 LTLE 258 >gi|270295351|ref|ZP_06201552.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270274598|gb|EFA20459.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 366 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 83/301 (27%), Gaps = 64/301 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++L+S+NI + Y K ADI+ LQE + + Sbjct: 101 SIKLLSYNIMGFDGAAKQDGKNP-----------ILTYLKESGADILCLQEYSTVQSSKH 149 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + K+ + ++ S IA K + + Sbjct: 150 LSQKDVERELKAYPYHRINT-VGSGKGHTNKIACYSKFPILSSRILDYPS--------EY 200 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSL-----------------------ENTYSP 179 +V ++I + +++ HL+S + + Sbjct: 201 NGSVLYEIKIGEDTVTLINNHLESNKLTKADKVVYEDMLKSPEKEKVKSGARLLIRKLAE 260 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + ++ + QA + I ++ GDFN + + +D F + Sbjct: 261 ASAIRAPQADTIAHEIA--ASPHPYIIVCGDFNDTPISYT-HRTIAQDLDD-----AFTQ 312 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + R ID + +N + + R + SDH PI Sbjct: 313 SGRGLGISYNQNRFYFRIDNILTSKNLRAY-------------NCTVDRSIKESDHYPIW 359 Query: 300 I 300 Sbjct: 360 C 360 >gi|261838799|gb|ACX98565.1| exodeoxyribonuclease [Helicobacter pylori 51] Length = 250 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 81/303 (26%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++DAD+ +QE + + + Sbjct: 1 MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + + D R Sbjct: 42 QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINIDEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + ++++++ + S + + + L+ Sbjct: 91 -----VVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|149203971|ref|ZP_01880939.1| exodeoxyribonuclease III [Roseovarius sp. TM1035] gi|149142413|gb|EDM30458.1| exodeoxyribonuclease III [Roseovarius sp. TM1035] Length = 262 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 30/306 (9%), Positives = 68/306 (22%), Gaps = 71/306 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L +WNIN++ +EG+ + + + DI+ LQE S Sbjct: 2 SFTLATWNINSVRLREGL----------------VARLMQEEGPDILCLQECKSPVDKMP 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + +A+ K + + Sbjct: 46 LEGFAALGYAHV---------VARGQKGYNGVAILSKLPIEEVGAMDFADLGHARH---- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + +E V+ + D + + ++DW + Sbjct: 93 ---IAGRLENG-----VVIHNFYVPAGGDVPDRAVNDKFGQKLDYLTGMRDWFHDSRPEK 144 Query: 203 VPFVIAGDFNRKINYLGN--NDDFWKTID-------------PNDSLIRFPKEKDSRCNA 247 ++ GD N + K + + Sbjct: 145 A--ILVGDLNIAPREDDVWNHKQLLKIVSHTPVEVDHLSAVMAAGGWQDVTRADIPEGQL 202 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + ++ SDH P Sbjct: 203 YSWWSYRAADWDAADKGRRLDHVWATGDIATSAHSS-------RILRGARGWEQPSDHAP 255 Query: 298 ISIDYD 303 + +D Sbjct: 256 VFATFD 261 >gi|119962536|ref|YP_947021.1| exodeoxyribonuclease III [Arthrobacter aurescens TC1] gi|119949395|gb|ABM08306.1| exodeoxyribonuclease III [Arthrobacter aurescens TC1] Length = 277 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 75/305 (24%), Gaps = 65/305 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ S N+N L + ++ + + DI+ LQE+ + + + + Sbjct: 10 LRIASVNVNGLRAAYKNG---------------MAEWLEPREVDILCLQEVRAPDDIVRK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 W I ++ +A+ + + D+ R Sbjct: 55 LIGEGWHILHTEAEAKG----------RAGVAIASREEPTATRVGIGDDYFDTSGRWVEA 104 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + V+ ++ S + + + + + + Sbjct: 105 DYTVQNAAGEFTTLSVVSAYVHSGEVGTPKQEDK-------FRFLDAMTVRLPELAKHSD 157 Query: 204 PFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSR-CN 246 ++ GD N L + F + + + Sbjct: 158 HALVVGDLNVGHTELDIKNWKGNVKRAGFLPEERAYFDRFLGEEIGWRDVHRGLAGNVAG 217 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDY + D S R SDH P Sbjct: 218 PYTWWSQRGKAFDTDTGWRIDYHLATPGLAAAA-------FSAVVDRAPSWDTRFSDHAP 270 Query: 298 ISIDY 302 + +DY Sbjct: 271 LVVDY 275 >gi|118472074|ref|YP_885233.1| exodeoxyribonuclease III [Mycobacterium smegmatis str. MC2 155] gi|118173361|gb|ABK74257.1| exodeoxyribonuclease III [Mycobacterium smegmatis str. MC2 155] Length = 260 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 33/306 (10%), Positives = 75/306 (24%), Gaps = 72/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + + D D++ +QE + Sbjct: 1 MRVATWNVN----------------SIRARVDRVTDWLARADVDVLAMQETKCSDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + Q LG + + Sbjct: 41 ------KFPAMPFVELGYEVAYHGLNQWNGVAIASRVGLENVQ----LGFDNQPAWEAAA 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202 A L G + V +++ + +DS Y + L+D + Sbjct: 91 EARALAATCGG--VRVWSLYVPNGRTVDSPHYAYK------LEWLAALRDNAQKWLADDP 142 Query: 203 -VPFVIAGDFNRKINYLGN---------------NDDFWKTIDPNDSLIRFPKEKDSRCN 246 + GD+N ++ I Sbjct: 143 QAQIALTGDWNIAPTDEDVWDIDFFAGSTHVTEKERAAFQAIVDAQFADVVRPFAPGP-G 201 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 ID+ + + + + +GK SDH P Sbjct: 202 VYTYWDYTQLRFPKRQGMRIDFILGSPAFAQRVGHAEIV-------REERKGKSPSDHAP 254 Query: 298 ISIDYD 303 + ++ + Sbjct: 255 VLVELN 260 >gi|157804057|ref|YP_001492606.1| exodeoxyribonuclease VII large subunit [Rickettsia canadensis str. McKiel] gi|157785320|gb|ABV73821.1| exodeoxyribonuclease VII large subunit [Rickettsia canadensis str. McKiel] Length = 260 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 89/305 (29%), Gaps = 73/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 +++ +WNIN + LLR + + DI+ LQE+ + + Sbjct: 1 MKIATWNIN----------------SIKTRLNLLRNFLSKENPDILLLQEIKCETEKFLF 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + ++ + +A+ K + +++ Sbjct: 45 DELSDLPYNLYVH------------GQKTYNGVAIISKFPANE----IIKDFPNNYCSDQ 88 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R +E+ + + ++ ++ F+ S + + + L ++++ KK Sbjct: 89 ARF-LEIKLSLPIGLCNIISLYAPHGSFVGSDKFVTKLAF------YESLINYLSTKKSF 141 Query: 202 LVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCN 246 +I GDFN + +TI + + + Sbjct: 142 DEKTIIGGDFNIAPFDIDVYSPKALAETTCFTKVEQKKLRTILNSRFEDLY-RLMYPNKQ 200 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + ID + N +L D ++ SDH P Sbjct: 201 EFSWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYM-------DYNLRTQEKPSDHIP 253 Query: 298 ISIDY 302 + ++ Sbjct: 254 VIANF 258 >gi|295094002|emb|CBK83093.1| Metal-dependent hydrolase [Coprococcus sp. ART55/1] Length = 367 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 99/324 (30%), Gaps = 60/324 (18%) Query: 17 TASVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 + SV + +V+WN+ G S++ ++ K+ + + +L ADI Sbjct: 61 SPSVGDSISIVTWNLGYGSLGANADFFMDGGDSVYTSTAKQVNDNMEAITSELNSLAADI 120 Query: 69 VFLQEMGSY----------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 LQE+ + + + P T Y+ + L+ + + I Sbjct: 121 FLLQEVDERSSRSHKINEADILREKLPSYTSSYAYNYKTLMVPYPLPPIGRVTSGIMTLC 180 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + L R N R + + I G + ++ ++L + Sbjct: 181 SFEVSDAERIQLPCPFSYPIRLCNLKRCLIVSRIPIAGSEHELVIVNLHLEAYD------ 234 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS--- 233 S + Q + L D + + + + GDFN+ + + + ++ D Sbjct: 235 ---SGEGKAAQTRMLADILQNEAAAGNYVIAGGDFNQTFSNVDLSAYPQQSADLWAPGSI 291 Query: 234 --------LIRFPKEKDSRCNANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSE 277 I C + ID F++ N Sbjct: 292 DVSEFGDSFICSTDSSAPTCRSLDKPYEGSDHESFQYYVIDGFIVSSNLQ---------- 341 Query: 278 ILYNEDDIKSRGKRLSDHCPISID 301 N + + + SDH PI +D Sbjct: 342 --INSTETINLDFKNSDHNPIRLD 363 >gi|119775274|ref|YP_928014.1| exodeoxyribonuclease III [Shewanella amazonensis SB2B] gi|119767774|gb|ABM00345.1| Exodeoxyribonuclease III [Shewanella amazonensis SB2B] Length = 268 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 38/310 (12%), Positives = 82/310 (26%), Gaps = 72/310 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L S L+ DI+ LQE + Sbjct: 1 MKVVSFNINGL----------------RSRLHQLQALIDTQAPDIIGLQE---TKVHDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + H +A+ K + A+D+ R Sbjct: 42 FP-------LADVEAMGYKVYFHGGKAHYGVALLSKVEPESVEKGYPWDAEDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + ++ + + + F + + L+ +T+ Sbjct: 90 RMIIGKFRQPNGRL----LTVMNGYFPQGESRDHEIKFPAKRKFYADLQRLLTESYSCDD 145 Query: 204 PFVIAG---------DFNRKINYL------------GNNDDFWKTIDPNDSLIRFPKEKD 242 +I G D + ++ +T+ F Sbjct: 146 DIIIMGDINISPLDLDIGIGPDNAKRWLRTGKCSFLPEEREWLQTLKDWGFDDSFRVLHP 205 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID + ++ L+ D ++ S Sbjct: 206 EKDATYSWFDYRSKGFDDNRGLRIDVIMTTRSLTGRLVASGV-------DYNIRAMEKPS 258 Query: 294 DHCPISIDYD 303 DH P+ +++ Sbjct: 259 DHAPVWSEFE 268 >gi|261205712|ref|XP_002627593.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Ajellomyces dermatitidis SLH14081] gi|239592652|gb|EEQ75233.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Ajellomyces dermatitidis SLH14081] gi|239611196|gb|EEQ88183.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Ajellomyces dermatitidis ER-3] Length = 773 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 40/358 (11%), Positives = 88/358 (24%), Gaps = 75/358 (20%) Query: 22 QKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 K +S+N + + + L+ K +ADIV LQE+ + Sbjct: 378 DKFTALSYNTLCDRSATHQQHGYAPSRALAWEYRRDLILNEIKGYNADIVCLQEIDQGSY 437 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL--- 131 + + + ++ + K + + + Sbjct: 438 HGFFREQLAYNDYKGVYWPKGRAQGMPEEEAKVVDGCATFFKGSKYILLEKNMIHFGQTA 497 Query: 132 -------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 G D ++R + + ++ ++G+++ V+++HL ++ + Sbjct: 498 VRRPDAKGQDDIYNRLWQKDNIAVVTYLENRLSGERLIVVNVHLYWDPAYKDVKLIQAAI 557 Query: 181 CSLLSQQAQWLKDWITQKKESLV---------------------------------PFVI 207 Q I + P +I Sbjct: 558 LMEEVTQLAEKYSKIPACTDKTAFRFSEPENSADGDGTATPVEPAPSVEYSSGSQIPLII 617 Query: 208 AGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NA 247 GDFN ++ + + F + Sbjct: 618 CGDFNSYPGSAVYELMSRGHLIEDHPDLEKRLYGNLSRRGMSYPFNLKSAYGAIGELDFT 677 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISIDYDF 304 N IDY NA + + Y + SDH + ++ F Sbjct: 678 NYTPDFADVIDYIWYTSNALQVTGLLGAVDKSYLQRVPGFPNYHFPSDHLALMAEFSF 735 >gi|167648820|ref|YP_001686483.1| endonuclease/exonuclease/phosphatase [Caulobacter sp. K31] gi|167351250|gb|ABZ73985.1| Endonuclease/exonuclease/phosphatase [Caulobacter sp. K31] Length = 358 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 84/312 (26%), Gaps = 35/312 (11%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + ++ ++++N+ L + LR+ K L+ D+V LQE Sbjct: 47 PIGPTRPVELSVMTYNVEGLPWPVRSGRGSKLKEIGRQ-LAGLRE--KGLEPDVVLLQEG 103 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSK--------------------RDSNNDIHTAI 114 V + + + R + + Sbjct: 104 F-RAEVDDLIELSGYPYVAKGPRKKQRDGSQLTKEDRPRYKRVKYRRKGEGWGKWGSSGL 162 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 V + +S+ N+ + + +++ G + V S Sbjct: 163 WVLSNHPIRWVKSHAYHYCA-GLDCLANKGVMLVSLDVPGLPVPVEIADTHLNSKGASGV 221 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + QA+ L ++ + P ++ GDFN + + S Sbjct: 222 PRNRNRIAH-HLQAEELGRFMGTDRTPGAPLIVGGDFNVMHAPDRFDYVMQRYPFEVVSQ 280 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL----YNEDDIKSRGK 290 + F + + +D Q+ F + D + G Sbjct: 281 VCFQVPDSCDAKISADGDAPW-LD----TQDLIGFKQGDRVGIRPILVEARFDGSATGGP 335 Query: 291 RLSDHCPISIDY 302 LSDH + + Sbjct: 336 VLSDHDAYEVTF 347 >gi|329847835|ref|ZP_08262863.1| exodeoxyribonuclease III [Asticcacaulis biprosthecum C19] gi|328842898|gb|EGF92467.1| exodeoxyribonuclease III [Asticcacaulis biprosthecum C19] Length = 258 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 76/302 (25%), Gaps = 70/302 (23%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 ++ ++N+N ++ +L ++ D+V LQE Sbjct: 3 KIATFNVNGVNG----------------RLPVLLRWLAEARPDVVCLQE----------L 36 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + +A+ ++ L G D Sbjct: 37 KAPDEKFPVKALEAAGYGAIWHGQKSWNGVAILAHGAEPVETRRGLPGDPDDTHSRYIEA 96 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 AV ++ ++L + + Y + + LK + + P Sbjct: 97 AVNGVLIGG--------LYLPNGNPWPGKKFEYK------LRWFERLKAHAAELLTTGAP 142 Query: 205 FVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNANK 249 V+AGD+N + + + + + Sbjct: 143 VVLAGDYNVMPTDIDVYAPDRWQDDALFRIEVREAYAALMAQGWTDALRELHPGEQIFTF 202 Query: 250 NLRNKIP--------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + ID+ ++ + L Q D ++ SDH P+ I Sbjct: 203 WDYLRARWPRNAGLRIDHLLLSPSMAPRLRQAEV-------DRHVRGWEKASDHAPVWIV 255 Query: 302 YD 303 D Sbjct: 256 LD 257 >gi|157145931|ref|YP_001453250.1| hypothetical protein CKO_01684 [Citrobacter koseri ATCC BAA-895] gi|157083136|gb|ABV12814.1| hypothetical protein CKO_01684 [Citrobacter koseri ATCC BAA-895] Length = 300 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 84/286 (29%), Gaps = 45/286 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NI KN +D+T L K + ADI+ + E+ + A ++ Sbjct: 50 LRIATYNI-----------GKNEASENVADFTSLNAAIKKIAADIIAVPEVDNKTARSQK 98 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + I + K + + + K Q L A R Sbjct: 99 IDQLK-TIADANNYHYAFGKALDFDGGEYGLGILSKYKIQHTQVINLPSG-----DAEQR 152 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202 A+ + + G VL + + ++ +Q + L D S Sbjct: 153 VALLAQIAVPGFDTPVLVMVTHL---------DWQKDPTMRIEQVRHLLDVSIGDASSDF 203 Query: 203 -----VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 ++AGDFN + + +++ + + I I Sbjct: 204 KDIASSIKILAGDFNSTRDEQP--------LKEIGYFFNPVEKQGTDYRTWPAVNPAIDI 255 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D+ + + + + SDH P D + Sbjct: 256 DHIFTFKGQKWDVKKIDIPH-----NSPAFTWSSASDHLPFIADME 296 >gi|170724257|ref|YP_001751945.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida W619] gi|169762260|gb|ACA75576.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida W619] Length = 284 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 38/292 (13%), Positives = 84/292 (28%), Gaps = 58/292 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 ++RL+S+NI E + + + + D D+V L Sbjct: 28 PEDGRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHTGRAGNLQKIGDLLN--DFDLVAL 85 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE+ + + + R+ + + V + L + +PL Sbjct: 86 QEVDGGSLRSGYVNQVEHLAQLGGFPYWYQQLNRNLGHFAQHSNGVLSRLKPHLLEDHPL 145 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G R A+ + + V+ +HL ++Q + Sbjct: 146 PGPSG-------RGAILVRFGEGEDALIVVMMHLALG-------------ARTRARQLAY 185 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 +++ I V+ GD N N + + L + Sbjct: 186 IRELIGGY----RHQVLMGDMNTHAND----------LLDHSPLRDLGLIAPQVEATFPS 231 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + +D+ ++ + ++ I SDH P++++ Sbjct: 232 WRPQRCLDHILLSPSLTLERVEVLAQPI--------------SDHLPVAVEI 269 >gi|90419844|ref|ZP_01227753.1| endonuclease/exonuclease/phosphatase family protein [Aurantimonas manganoxydans SI85-9A1] gi|90335885|gb|EAS49633.1| endonuclease/exonuclease/phosphatase family protein [Aurantimonas manganoxydans SI85-9A1] Length = 248 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 78/280 (27%), Gaps = 52/280 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 R+ S+NI K+ + LDADIV LQE+ ++ Sbjct: 2 FRVASYNIR-----------KSVGTDWRRRPKQILDVLTELDADIVALQEV-DRRLGDRL 49 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + I T + + + L + L+ R Sbjct: 50 SSLSPGLIAEMTHFRPIRFGVRPGSLGWHGNTILVRKDVELLRRKRLV-----LPALEPR 104 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A ++I KI V+ +HL +QA+ + D + E + Sbjct: 105 GAALADLQIGDLKIRVVGMHLGLVGLW-------------RKRQARAVLDQLAS-LEEPL 150 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 P V+ GD N+ W T + + + + + D + Sbjct: 151 PTVMMGDLNQ-----------WNTEGGCLAHFAEDHHVIAPGLSFHSQMPFVSFDRIITS 199 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + R + SDH P+ D Sbjct: 200 LDIHVDAAAV----------HSSERARLASDHLPVWADLS 229 >gi|70733598|ref|YP_257238.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens Pf-5] gi|68347897|gb|AAY95503.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens Pf-5] Length = 292 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 40/298 (13%), Positives = 85/298 (28%), Gaps = 58/298 (19%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLD 65 L ++RL+S+NI E + + + + D Sbjct: 22 LASSGLPADSRLRLLSFNIQVGISTERYRHYLTRGWQHLLPHHGRADNLQKIGNLLG--D 79 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVL 124 D+V LQE + + + R+ + V + Sbjct: 80 FDLVALQEADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRNLGRLAQHSNGVLSRLRPWA 139 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + +PL G K R A+ + + + V+ +HL Sbjct: 140 IEDHPLPGPKG-------RGAILVRFGEGPEALVVVMMHLALG-------------ARTR 179 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 ++Q ++++ I K V+ GD N + L + L Sbjct: 180 TRQLAYIRELIGGYKHQ----VLMGDMNTHASDLLEHSPLRDLSLLAPQLQA-------- 227 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + R + +D+ ++ + ++ I SDH P++++ Sbjct: 228 --TFPSWRPQRCLDHILLSPSLTLERVEVLAQPI--------------SDHLPVAVEI 269 >gi|261365939|ref|ZP_05978822.1| exodeoxyribonuclease III [Neisseria mucosa ATCC 25996] gi|288565482|gb|EFC87042.1| exodeoxyribonuclease III [Neisseria mucosa ATCC 25996] Length = 259 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S N+N + + +Y ADIV +QE+ + A Sbjct: 2 LKIISANVNGIRSAYKKGFY---------------EYIATSGADIVCVQELKAQEA---- 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + H ++ +AV K +G R Sbjct: 43 ---DLSDEMKNPHGMHGHWHCA-EKRGYSGVAVYSKRAP----DNVQIGMGIEEFDREGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + K+ V+ ++L S + L + + K Sbjct: 95 F-----VRCDFGKLSVISLYLPSGTSAPERQ-------ELKYRFLDAFYPMLEAMKAEGR 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248 V+ GD+N + + + + Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHTLGWTDMWRTLYPDNPGY 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY ++ + + ++ SDH P+ Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAVKAVSAHV-----------YKDEKFSDHAPLV 251 Query: 300 IDYDF 304 ++YD+ Sbjct: 252 VEYDY 256 >gi|302188968|ref|ZP_07265641.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae 642] Length = 291 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 37/292 (12%), Positives = 81/292 (27%), Gaps = 58/292 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 ++RL+S+NI + + + + + D D+V L Sbjct: 30 PEDGRLRLLSFNIQVGISTQRYHHYLTRSWQHLLPHGGRAGNLQKIGDLIN--DFDLVAL 87 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE+ + + + R+ + V + + +PL Sbjct: 88 QEVDGGSMRSGFVNQVEHLAQLGGFPYWYQQLNRNLGRLAQHSNGVLSRLRPTKIEDHPL 147 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G R A+ + + V+ +HL ++Q + Sbjct: 148 PGPAG-------RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQLAY 187 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 +++ I V+ GD N N L + + + Sbjct: 188 IRELIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 233 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + +D+ ++ +Q I SDH P++++ Sbjct: 234 WRPQRCLDHILLSPTLTLERVQVLAQPI--------------SDHLPVAVEI 271 >gi|297571824|ref|YP_003697598.1| exodeoxyribonuclease III Xth [Arcanobacterium haemolyticum DSM 20595] gi|296932171|gb|ADH92979.1| exodeoxyribonuclease III Xth [Arcanobacterium haemolyticum DSM 20595] Length = 290 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 74/278 (26%), Gaps = 45/278 (16%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 ++ + D++ LQE+ + + + + + + + Sbjct: 21 EWIAVVSPDVLLLQEVRAPEELVPELIGENYTVIQQACDIKGRAGVAIAVKKGVDV---G 77 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRA-------VELLVEINGKKIWVLDIHLKSFCFLD 171 + L P + +R A + V+I K + +L S D Sbjct: 78 RISIGLGSDLPDCEPDTDALASWDRPAEPPVDTGRWIEVDIPAYKTTFVSAYLHSGTATD 137 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-------- 223 + + L T + E L ++AGDFN + Sbjct: 138 QAKMDAKYAHLDRVT--TRLAQLRTNRSEELPHILVAGDFNIVHTERDITNWKSNHNKTA 195 Query: 224 ---------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQN 265 K + + + IDY ++D + Sbjct: 196 GVLDPEIAYVDKWTETMGYIDVQRYLIGDEQAEYTWWSQRGKAFDNNVGWRIDYHLVDPD 255 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + D +S +R SDH P+ + YD Sbjct: 256 LAQRA-------HSLRIDRAESYDQRWSDHAPLIVTYD 286 >gi|242054695|ref|XP_002456493.1| hypothetical protein SORBIDRAFT_03g037240 [Sorghum bicolor] gi|241928468|gb|EES01613.1| hypothetical protein SORBIDRAFT_03g037240 [Sorghum bicolor] Length = 511 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 38/313 (12%), Positives = 95/313 (30%), Gaps = 70/313 (22%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + + ++++SWN+N L + ++Q A+ D D++ LQE Sbjct: 242 PPLSKDTRALKIMSWNVNGLKALLKSRGF------------SVQQLAQREDFDVLCLQET 289 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 +V + ++ + ++ A+ + + + + Sbjct: 290 KMQEKDVEVIKDTLLDGYTNSFFT-----CSVSKLGYSGTAIISRVKPLSIKYGLGIPDH 344 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKD 193 D+ R +V + ++L ++ + L L + L + L+ Sbjct: 345 DTEGR---------VVTVEFDDFYLLTAYVPNSGDGLKRLTYRVTEWDPSLGNYMKELEK 395 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFP 238 P ++ GD N + +D ++T + + Sbjct: 396 --------SKPVILTGDLNCAHQEIDIHDPAGNRKSAGFTNEERESFETNFLSKGFVDTF 447 Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 +++ A + +DYF++ ++ + + D Sbjct: 448 RKQHPSVVAYSYWGYRHNARKTNKGWRLDYFLVSESIAEKVH-----------DSYILPD 496 Query: 290 KRLSDHCPISIDY 302 SDH P+ + Sbjct: 497 ISASDHSPLGLVL 509 >gi|300774456|ref|ZP_07084319.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] gi|300506271|gb|EFK37406.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] Length = 340 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 41/296 (13%), Positives = 94/296 (31%), Gaps = 87/296 (29%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++++N+ + ++ Y K DADI+ +QE + + + Sbjct: 113 DIKVLTFNVKY----------------GEYGWDKVKDYIKAQDADIILVQEKDTNRVIKR 156 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 K V+ ++ + + Sbjct: 157 DL---------------------------------IKYPSVILKTKHKIVRQAELIDEKA 183 Query: 143 RR-AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS---------------PSCSLLSQ 186 R + ++INGK + +++++L+ F S+ P+ Sbjct: 184 RGNSFYADIDINGKVVRIINVYLEPFRLNKSMFTKLDALGLGNVSTLLSHMTPTFQAHED 243 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 Q + ++ + S P ++AGDFN N + D F + Sbjct: 244 QVKRIRKMVDL---SPYPVILAGDFNSVPNSYEYYNL------GKDLQDAFLVAGKGSAS 294 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + + IDY ++ +I S+ + +LSDH P+ ++ Sbjct: 295 SFHDYKVPLRIDYIFSSKS----IIPLSYKV---------DQSVKLSDHYPVIAEF 337 >gi|224074603|ref|XP_002304397.1| predicted protein [Populus trichocarpa] gi|222841829|gb|EEE79376.1| predicted protein [Populus trichocarpa] Length = 356 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 78/322 (24%), Gaps = 43/322 (13%) Query: 24 VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV- 80 LVS+NI + + + + + KNL D + LQE+ Y++ Sbjct: 32 FSLVSYNILAQVYVKSSIFPHSPSPCLKWKARSQEILTVLKNLGTDFLCLQELDEYDSFY 91 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN------------VRVLQQSY 128 K + Y A + ++ V +L Sbjct: 92 KKNIESYGYSSIYIQRSGQKRDGCGIFYKPDCADLLLEERIEYNDLVDSIQDVSILCDDK 151 Query: 129 PLLGAKDSFSRAGNR--------------RAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + + + + + V+ + + Sbjct: 152 HSDTQANGDENSEPKNDPNDPRVRLKRDCVGIMAAFRLKNTPHHVI-VANTHIYWDPEWA 210 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + L + K+ +++K E + ++AGDFN + Sbjct: 211 DVKLAQAKYLLSRVAQFKELVSEKYECMPSVILAGDFNSIPGDKVYEYLVSGSSSSASLA 270 Query: 235 IRFPKEKDSRC-----------NANKNLRNKIPIDYFVM--DQNAYKFLIQESFSEILYN 281 + C N +DY D E N Sbjct: 271 ECLDELPIPLCSVYGSTRGEPPFTNCTPDFTNTLDYIFFVPDDQIKPLSFLELPEANSPN 330 Query: 282 EDDIKSRGKRLSDHCPISIDYD 303 SDH PI +++ Sbjct: 331 VLGGLPNYYHPSDHLPIGAEFE 352 >gi|148664803|gb|EDK97219.1| deoxyribonuclease I, isoform CRA_a [Mus musculus] Length = 301 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 34/289 (11%), Positives = 86/289 (29%), Gaps = 34/289 (11%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +R+ ++NI T E + + + + DI +QE+ + V Sbjct: 37 AGTLRIAAFNIRTFGETKMSNATLSVY---------FVKILSRY--DIAVIQEVRDSHLV 85 Query: 81 A--KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 A K+ + + +++ + R V +L G + + Sbjct: 86 AVGKLLDELNRDKPDTYRYVVSEPLGRKSYKEQYLFVYRPDQVSILDSYQYDDGCEPCGN 145 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD-WITQ 197 +R + ++ I + + + L D ++ Sbjct: 146 DTFSREPAIVKFFSPYTEVQEFAIVPLH------------AAPTEAVSEIDALYDVYLDV 193 Query: 198 KKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 ++ + GDFN +Y+ ++ + + + + + Sbjct: 194 WQKWGLEDIMFMGDFNAGCSYVTSSQWSSIRLRTSPIFQWLIPDSADTTVTSTHCAY--- 250 Query: 257 IDYFVMDQNAYK-FLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302 D V+ + ++ S + + S + +SDH P+ + Sbjct: 251 -DRIVVAGALLQAAVVPNSAVPFDFQAEYGLSNQLAEAISDHYPVEVTL 298 >gi|313159067|gb|EFR58442.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 348 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 38/316 (12%), Positives = 96/316 (30%), Gaps = 69/316 (21%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 YV +++ + + +R+ + N+N + S+ + + ++ Sbjct: 85 YVSSMIQLPDFNAPAGSHDIRIATLNVNGFRQLGPKSIT----------AAAVAEMMRHE 134 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 D++ LQE FP ++ +S S+ + AV + + Sbjct: 135 QVDVLCLQEFLDDGE----FPADSIGALFSRRMPYFVSEGNG--------AVASRYPILD 182 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC---------------- 168 + + + + + + G + + +HL++ Sbjct: 183 CKYVRFPDTSNDY--------LRADLLVEGDTLRIFSVHLQTSGIAQLRRRFQKDYNREA 234 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 +DS+ + + + Q + ++ + S P ++AGDFN + + Sbjct: 235 PVDSMLGAVDRNSRIRAAQVREIRA---ETDASPYPVILAGDFNDTPSSYTYREM----- 286 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 F + + + L + IDY + + Sbjct: 287 -KGALTDGFRRCGNGYGGTFRYLGGLLRIDYVFY--------------DDTFECVRYYMP 331 Query: 289 GKRLSDHCPISIDYDF 304 + +SDH + + F Sbjct: 332 SEVVSDHKVVIAELRF 347 >gi|325964365|ref|YP_004242271.1| metal-dependent hydrolase [Arthrobacter phenanthrenivorans Sphe3] gi|323470452|gb|ADX74137.1| metal-dependent hydrolase [Arthrobacter phenanthrenivorans Sphe3] Length = 275 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 35/293 (11%), Positives = 65/293 (22%), Gaps = 47/293 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 VR+V+WN+ + + DIV L E + ++ Sbjct: 19 TVRIVTWNVW------------GRYGPWQEREAAVIATLTDARPDIVVLTESWTTAEDSQ 66 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 ++ D + A+ R + G Sbjct: 67 CARLAGPLGLPHHAFSGVPAQEDESALSGVAVLSRWPI------------TAQAGMDFGA 114 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + I V + ++ + + L + + + Sbjct: 115 LRVQQATIAGPRGPITVYGGVMDAWWPDQG---------RQRQEAVRALLEHLKTSWDDR 165 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--------- 253 P V+ GDFN + + P L + + N Sbjct: 166 TPLVVCGDFNADPDSDEIRMFTGRVAAPVPGLSFYDAWEAGGTERGCTWANTNPWATQLL 225 Query: 254 --KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY G SDH + D + Sbjct: 226 WPDRRIDYVFTG---MPRRGGAGHPLAAELLGTRPLHGMYPSDHLALQADLRY 275 >gi|322378535|ref|ZP_08052983.1| exodeoxyribonuclease [Helicobacter suis HS1] gi|321149049|gb|EFX43501.1| exodeoxyribonuclease [Helicobacter suis HS1] Length = 306 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 77/303 (25%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RLVSWN+N L + + ADI +QE Sbjct: 52 MRLVSWNVNGLRACMQKGFC---------------DFLEQSQADIFCVQETKMQQE-QAS 95 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + +F+++ + + + + K + + D+ R Sbjct: 96 FCFEGYEVFWNSAQKKGY----------SGVLTLSKIAPLQVSYGIGIAEHDTEGR---- 141 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ ++++++ + Q L Sbjct: 142 -----VITCEYPNFYLVNVYTPNAQRGLLRLPYRLEWERSFRGFLQNLMQ--------KK 188 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GD N N D ++ + + F ++ + Sbjct: 189 AVVVCGDLNVAHNEIDLTNPQSNRYNAGFSDPERDAFRQLLNLGLIDTFRHFYPTKAESY 248 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ Q L + SDHCP+ Sbjct: 249 TWWSYINQARAKNIGWRIDYFLTSQTLNSCLQSAYIYNHIL-----------GSDHCPVG 297 Query: 300 IDY 302 +D Sbjct: 298 LDL 300 >gi|304410326|ref|ZP_07391945.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS183] gi|307301963|ref|ZP_07581721.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica BA175] gi|304351735|gb|EFM16134.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS183] gi|306914001|gb|EFN44422.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica BA175] Length = 398 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 42/366 (11%), Positives = 92/366 (25%), Gaps = 88/366 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +++ S N+ E S + L ++ + DIV QE+ S + Sbjct: 30 IKIASINLFNFIEPPLAYYDFENIYSHGQWQKKCQWLSEFLAHRQPDIVGFQEVFSPEPL 89 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137 ++ + + ++ A+A R V + + S Sbjct: 90 KRIASEQG-LVHFAVIDAPTLISDYIYRSPVVALASRYPIVEISSVEPDARLVAAMGLSS 148 Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPS---------------- 180 +R+ + VE+ K +H KS +LE + Sbjct: 149 EFTFSRKVLRATVEVPHIGKCDFYVVHFKSKRAGLALEPKRFENQPLGFDNSAPAASMKL 208 Query: 181 --------CSLLSQQAQWLKD----------WITQKKESLVPFVIAGDFNRKI------- 215 L + A ++ + +++ S P ++ GDFN + Sbjct: 209 HSETQLLTEQALGRWASTMQRGAEAALLFNGILVRRQASKHPVIVMGDFNDSLTMGALDA 268 Query: 216 --------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN--------------------- 246 + + F + + Sbjct: 269 LTIQGESIHSNDIKAAGLGHLSDAALAAVFAQYQLKDAYELFIEANLRDSLAGNTAYHRE 328 Query: 247 ----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKRLSDHC 296 + +DY ++ + + Y D R +DH Sbjct: 329 HRAATHYYGPKGSVLDYILLSSEFDASHGRSLAQVVDYQTCDRHLVRPEYERDAYSTDHA 388 Query: 297 PISIDY 302 P+ ++ Sbjct: 389 PVIVEL 394 >gi|283807250|pdb|3L1W|A Chain A, The Crystal Structure Of A Functionally Unknown Conserved Protein From Enterococcus Faecalis V583 gi|283807251|pdb|3L1W|B Chain B, The Crystal Structure Of A Functionally Unknown Conserved Protein From Enterococcus Faecalis V583 gi|283807252|pdb|3L1W|C Chain C, The Crystal Structure Of A Functionally Unknown Conserved Protein From Enterococcus Faecalis V583 gi|283807253|pdb|3L1W|D Chain D, The Crystal Structure Of A Functionally Unknown Conserved Protein From Enterococcus Faecalis V583 gi|283807254|pdb|3L1W|E Chain E, The Crystal Structure Of A Functionally Unknown Conserved Protein From Enterococcus Faecalis V583 gi|283807255|pdb|3L1W|F Chain F, The Crystal Structure Of A Functionally Unknown Conserved Protein From Enterococcus Faecalis V583 Length = 257 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 82/286 (28%), Gaps = 48/286 (16%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 ++ ++N+ V + + + + Q D + +QE+ Sbjct: 2 KIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLKA 54 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS-----R 139 Y+T ++ + AI ++ V+ + Y L Sbjct: 55 --------YTTFTCLSAEREGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHPEA 106 Query: 140 AGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R A+ L + V+++HL + + + + L D I Q Sbjct: 107 GCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGXTVILEELHDKIAQ 158 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNANKNLRNKI 255 P ++ GDFN + + + K N + P+ K Sbjct: 159 Y-----PTLLXGDFNAE-SGEEVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAELE 212 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + + + G+ SDH P+ + Sbjct: 213 EIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248 >gi|299753114|ref|XP_001833071.2| DNA-(apurinic or apyrimidinic site) lyase [Coprinopsis cinerea okayama7#130] gi|298410149|gb|EAU88760.2| DNA-(apurinic or apyrimidinic site) lyase [Coprinopsis cinerea okayama7#130] Length = 304 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 36/287 (12%), Positives = 79/287 (27%), Gaps = 54/287 (18%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 +R+ +WN+ L+ Y + DADI+ L E + Sbjct: 67 PDEGTLRIATWNVCGLAASMRKGFKY---------------YVEAEDADILVLTETKVND 111 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 A K+ + + S+ + A+ K + Y L G + Sbjct: 112 IPADPALKSRY---------PHQYWSISDKKTYAGTAILSKVKPL-HVDYKLPGHPNPKG 161 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R + + + +++ ++ + + + + L Sbjct: 162 RI---------LTLEFENAYLIGTYVVNAGQELKTMDAKKEWQTHFEAYIREL------- 205 Query: 199 KESLVPFVIAGDFNRKINY--LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + P + GD N + + S ++ N Sbjct: 206 -DKKKPVIWTGDLNVAPTEKEDDPERPQFVDVWRKLHPDLQHYTYWSYRFQSREKGNGWR 264 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D FV+ + + + +Y SDH P+ +D + Sbjct: 265 LDMFVLSTKLVDRVKKCEIRDEIY----------GASDHVPLIMDIE 301 >gi|56342183|dbj|BAD73859.1| deoxyribonuclease I [Heterodontus japonicus] Length = 282 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 39/301 (12%), Positives = 88/301 (29%), Gaps = 31/301 (10%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 + + C S +++ ++NI + +S + ++ + D Sbjct: 4 LITVLTLACVLSTVHSIQICAFNIKSFG---------DSKMSNATIANIIVNIVQRY--D 52 Query: 68 IVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 I+ +QE+ + +AV + K + + + S+ R V V Sbjct: 53 IILIQEVRDENLSAVKALMNKLNSPSAHIYSYIASDPLGRSSYKERYLFIYRNTMVSVTN 112 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 G++DS +R + + I + SL Sbjct: 113 SYLYDDGSEDSGHDIFSREPFLVKFSSPYSAVHDFVIMPQHTSP------------SLAI 160 Query: 186 QQAQWLKD--WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 ++ L D + ++K +I GD N +Y+ D + + + Sbjct: 161 KEIDALYDVFFDARRKLGTDNMLIMGDLNAACSYVKPADWADIRLRKDSQFQWLIPDSAD 220 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG--KRLSDHCPISID 301 I + +I S + + + + +SDH P+ + Sbjct: 221 TTTNIATKCAYDRI--IAVGSEMKNAVIDGSTAIYNFGKVFNLNNEMTLAVSDHYPVEVS 278 Query: 302 Y 302 Sbjct: 279 L 279 >gi|168031629|ref|XP_001768323.1| predicted protein [Physcomitrella patens subsp. patens] gi|162680501|gb|EDQ66937.1| predicted protein [Physcomitrella patens subsp. patens] Length = 369 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 46/338 (13%), Positives = 97/338 (28%), Gaps = 86/338 (25%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + + +SWN N+ + R ++ + + LD D++ +QE+ +A Sbjct: 38 EPTKFMSWNTNSF------------LLRLKTNREEVLSLLRRLDPDVIAIQEVRIPSAGR 85 Query: 82 KVFPKNT----------------WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 K P+N S L ++ S +D +++ Sbjct: 86 KGEPRNHGELKDDTNSAREDKQIMMRALSVSPLSDYGVWWSLSDSKYG-----GTALLVK 140 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 S + S A ++ +L+ ++ + + D + Sbjct: 141 HSCSPISILYSLDDKLKHEADGRVILAEFHSFRLLNTYVPNNSWKDDDNG-----FARRR 195 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNR-------------------------------K 214 + +++ + P + GD N Sbjct: 196 AWDARMIEFLKR--PHKKPLIWCGDLNVSNEVIDVSHPDFFSNAKLQGYTPPNAEDIGQP 253 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPK----------EKDSRCNANKNLRNKIPIDYFVMDQ 264 LG F + + D + + S K ++ IDYF++ + Sbjct: 254 GFTLGERQRFAECLSKGDLVDTYRHLHKQQDFDAGFTWSGNPVGKYRGKRMRIDYFLLSR 313 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 L+ I+ G SDHCPI+++ Sbjct: 314 KLLDRLVSSDIH-----GQGIEQEGFCGSDHCPITMEI 346 >gi|154492028|ref|ZP_02031654.1| hypothetical protein PARMER_01659 [Parabacteroides merdae ATCC 43184] gi|154088269|gb|EDN87314.1| hypothetical protein PARMER_01659 [Parabacteroides merdae ATCC 43184] Length = 299 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 27/317 (8%), Positives = 81/317 (25%), Gaps = 51/317 (16%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 +++L + +K+R++S+NI E + + K Sbjct: 11 LLISLFPITSNGQPARKEKLRVISYNIWNGFEHDAS------------RRANFIDWIKGQ 58 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-V 123 DI+ + E+ + + + H + + + V Sbjct: 59 QPDILAITELVGFTEKNLGQLASEY----------GHKYYAIVKEEGYPVGITSNKPITV 108 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL------ENTY 177 +++ + + + + K + + + + D+ + Sbjct: 109 VKKQVEDFWHGMLHVKTYGLDIIVTHLSPHDWKFRLKEAQMLTKYIQDNQLDNCMVMGDF 168 Query: 178 SPSCSLLSQQAQWLKDWIT---QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + + + I + + D +++Y + + L Sbjct: 169 NAYSPFDADWVETHAQLIKNKQKWDAEQETYRNMRD--GRLDYSVLSQFLSIGLTDICRL 226 Query: 235 IRFPKE--KDSRCNANKN-------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + + +DY ++ + + Sbjct: 227 YVPADKRTTFPTAFLYRWQHGDTRLHGISERLDYILVSPSLVSRCVDAHIHN-------- 278 Query: 286 KSRGKRLSDHCPISIDY 302 + +SDH P+S+D Sbjct: 279 GIETEGISDHYPVSVDL 295 >gi|86156859|ref|YP_463644.1| exodeoxyribonuclease III [Anaeromyxobacter dehalogenans 2CP-C] gi|85773370|gb|ABC80207.1| exodeoxyribonuclease III [Anaeromyxobacter dehalogenans 2CP-C] Length = 262 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 33/303 (10%), Positives = 78/303 (25%), Gaps = 80/303 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N + + ++ D+V LQE+ + + Sbjct: 1 MKIGTWNVNG----------------IRAREAQVGEFIAREGPDVVCLQEIKAPPS---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S L + ++ +A+ + ++ + D +R Sbjct: 41 ------KVPPSLCELEGYWCLWHGETAYSGVALLVRKAIAPERPAFVHPPFDLETR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 E+ G + V I++ + + + + ++ + + S Sbjct: 91 ---VATCELGG--VTVASIYVPNGG----------KDLAAKLRFLEAMERFAADAQASGR 135 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N L ++ I + + + Sbjct: 136 PLVLCGDLNVARTDMDVHPKERKAGAIGQLPEERALFERILAHGLVDVGRALDPANEGLF 195 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDY S SDH P+ Sbjct: 196 TWWAPWRNLRQRNIGWRIDYV-----------LASAPLAASATRCRVLADFGTSDHAPVV 244 Query: 300 IDY 302 ++ Sbjct: 245 AEF 247 >gi|306836858|ref|ZP_07469815.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49726] gi|304567265|gb|EFM42873.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49726] Length = 443 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 89/301 (29%), Gaps = 41/301 (13%) Query: 37 QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-----------YNAVAKVFP 85 G + + + LDAD++ L E+ A+ ++ Sbjct: 64 NRGKTRGAYTESALEDQERKIVAAINGLDADVIGLSEIEDGYAVTGDFDQRDKALKRLTE 123 Query: 86 KNTWCIFYSTERLINHSK----RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K + + I TA K V+ + +S + S + Sbjct: 124 KLNEAAGTEKWAFVPSPSKDQVPAHPDVIRTAFIYHKDVVKPVGESRIFQDPRFSGTARE 183 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFC----FLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 + + + + H KS + + + ++ + QAQ + D + + Sbjct: 184 PLAQEFQPLNSDDESFVAVANHFKSKGSVAKGDEDSGDGQGNNPNVRNAQAQAVLDALHK 243 Query: 198 KKE-SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + + P GDFN + + + ND ++ + + + Sbjct: 244 QDDWKDKPLFTLGDFNTYTHETALD------VFRNDGFTVPAEKYGADT-SYQFDGLLGT 296 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--------------LSDHCPISIDY 302 +D+ + ++ A L I +E +R SDH P+ + + Sbjct: 297 LDHVLANEVASGALDDAQVWNINADEPVAFEYSRRNYNAVDFYDDSPFRASDHDPVKVGF 356 Query: 303 D 303 Sbjct: 357 T 357 >gi|257465990|ref|ZP_05630301.1| exodeoxyribonuclease III [Fusobacterium gonidiaformans ATCC 25563] gi|315917146|ref|ZP_07913386.1| exodeoxyribonuclease III [Fusobacterium gonidiaformans ATCC 25563] gi|313691021|gb|EFS27856.1| exodeoxyribonuclease III [Fusobacterium gonidiaformans ATCC 25563] Length = 250 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 81/301 (26%), Gaps = 78/301 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + +Y + DADI LQE ++ Sbjct: 1 MKLISWNVNGIRACLKKGFM---------------EYFEAQDADIFCLQETKCSAGQVEL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K + + D R Sbjct: 46 -DLKGYHQYWN----------YAVKKGYSGTAIFTKKEPISVSYGLGIEEHDQEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ ++ + + L + Sbjct: 91 -----VITLEFEDFYMVTVYTPNSKNELERLDYRMVWEDEFRSYLAKLNE--------AK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + F R +A Sbjct: 138 PVVVCGDMNVAHEEIDLKNPKTNRRNAGFTDEERSKFTELLKAGFTDSFRYLYPDRLHAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+ + + + + + SDHCP++ Sbjct: 198 SWWSYRANARKNNTGWRIDYFVVSNDWKEQIQEAEIH-----------AEQEGSDHCPVA 246 Query: 300 I 300 + Sbjct: 247 L 247 >gi|331006177|ref|ZP_08329501.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC1989] gi|330420008|gb|EGG94350.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC1989] Length = 271 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 35/314 (11%), Positives = 97/314 (30%), Gaps = 78/314 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 ++++S N+N + ++ + K +DAD++ LQE+ Sbjct: 1 MKVISINVNGIRAAARKGMFG---------------WLKKVDADVICLQELKAQPDQIED 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + ++ + +S A+ + + + + + Sbjct: 46 SLYHPEGYYSYFHSAEKKGYSGVGIYCKEKPK-AIHMGLGAIDDADWEDVDREGRY---- 100 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 ++++ K + V+ +++ S + + + + + + Sbjct: 101 --------IQVDFKDVSVVSLYMPSGSAKEERQ-------EFKYVMMEKFEAVLRSMQRK 145 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWK-----------------------TIDPNDSLIRFP 238 F+I GD+N + + + N + Sbjct: 146 KREFIICGDWNIAHKKVDIKNWRGNQKNSGFLPEERSWMDWLLNEEDSLRNDNLQFVDAF 205 Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + + N+ IDY ++ + ++ S D+ + Sbjct: 206 RIINQEEHQYTWWSNRGQAWANNTGWRIDYHIVSKGLRDKVVAGS---------DLIYKE 256 Query: 290 KRLSDHCPISIDYD 303 +R SDH P++I+YD Sbjct: 257 ERFSDHAPLAIEYD 270 >gi|84687987|ref|ZP_01015851.1| exodeoxyribonuclease III, putative [Maritimibacter alkaliphilus HTCC2654] gi|84664019|gb|EAQ10519.1| exodeoxyribonuclease III, putative [Rhodobacterales bacterium HTCC2654] Length = 262 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 32/306 (10%), Positives = 73/306 (23%), Gaps = 71/306 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L +WNIN R +D + + + D++ LQE S Sbjct: 2 SFTLATWNIN--------------SVRLRADL--VSRLLADEAPDVLCLQECKSP----- 40 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 K IF + + +A+ K + Sbjct: 41 -VDKIPHDIFKA---RGYTHMVARGQKGYNGVAILSKLPLEDAGDQDFARLGHARH---- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + +E + + + ++ + D + + ++DW +K Sbjct: 93 ---IAAKLENG---VTIHNFYVPAG--GDKPDREINEKFGQKLDYLTEMRDWFHAEKPEK 144 Query: 203 VPFVIAGDFNRKINYLGN--NDDFWKTID-------------PNDSLIRFPKEKDSRCNA 247 ++ GD N + K + + ++ Sbjct: 145 A--ILVGDLNIAPREDDVWNHKQLLKIVSHTPVEVEHLGAAQDAGKWVDITRQDIPEGLL 202 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + ++ SDH P Sbjct: 203 YSWWSYRSPDWDTADKGRRLDHIWATPDISNAAHGSRILRDV-------RGWEKPSDHAP 255 Query: 298 ISIDYD 303 + +D Sbjct: 256 VFATFD 261 >gi|325088036|gb|EGC41346.1| glucose-repressible alcohol dehydrogenase [Ajellomyces capsulatus H88] Length = 769 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 39/358 (10%), Positives = 89/358 (24%), Gaps = 75/358 (20%) Query: 22 QKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +K +S+N + + + L+ K +ADIV LQE+ + Sbjct: 384 EKFTALSYNTLCDRSATHQQHGYAPSRALAWEYRRDLILNEIKGYNADIVCLQEIDQGSY 443 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL--- 131 + + + ++ + K + + + Sbjct: 444 HGFFREQLAYNDYKGVYWPKGRAQGMPEEEAKVVDGCATFFKGSKYILLEKNMIHFGQTA 503 Query: 132 -------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 G D ++R + + ++ ++G+++ V+++HL ++ + Sbjct: 504 VRRPDAKGQDDIYNRLWQKDNIAVVTYLENRLSGERLIVVNVHLYWDPAYKDVKLIQAAI 563 Query: 181 CSLLSQQAQWLKDWITQKKESLV---------------------------------PFVI 207 Q I + P +I Sbjct: 564 LMEEVTQLAEKYSKIPACTDKTAFRFSEPEHSTDGGGTATPVEPAPSVEYSSGSHIPLII 623 Query: 208 AGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NA 247 GDFN ++ + + F + Sbjct: 624 CGDFNSYPGSAVHELMSRGRLIEDHPDLEKRLYGNLSRVGMSYPFNLKSAYGAIGELDFT 683 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISIDYDF 304 N IDY +A + + Y + SDH + ++ F Sbjct: 684 NYTPDFADVIDYIWYTSSALQVTGLLGAVDKEYLQRVPGFPNYHFPSDHLALMAEFSF 741 >gi|295394280|ref|ZP_06804510.1| endonuclease/exonuclease/phosphatase [Brevibacterium mcbrellneri ATCC 49030] gi|294972864|gb|EFG48709.1| endonuclease/exonuclease/phosphatase [Brevibacterium mcbrellneri ATCC 49030] Length = 843 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 43/346 (12%), Positives = 89/346 (25%), Gaps = 65/346 (18%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGV----------------SLWKNSVKRTTSDYT--- 55 P + ++ +L S+N+ G ++ R ++ Sbjct: 504 PASPELSGG-KLASFNVLNFFPTTGDQLKGCSYYKDREGNPVTVNGGCDARGAANLESLS 562 Query: 56 ----LLRQYAKNLDADIVFLQEMGSYN-----------AVAKVFPKNTWCIFYSTERLIN 100 + +D ++ L+E+ + + + K ++ Sbjct: 563 RQQIKILNAINQMDVAVLSLEELENSEKFGKNRDFAISYLVRQLNKQAGYGKWAAVTSPK 622 Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG--NRRAVELLVEINGKKIW 158 ++ I T + + S L S +RA ++ + G+ Sbjct: 623 SVPATGDDVIRTGFIYQPAHADTEGTSEILDNPAFSNARAPLAQEFVLKKDGKTTGESFV 682 Query: 159 VLDIHLKSFCFLDSLENTYSPSCS-----LLSQQAQWLKDWITQKKES--LVPFVIAGDF 211 + H KS N S +QA+ + + K+ + GDF Sbjct: 683 AVVNHFKSKGSGKGPGNEDSGDGQGNSNADRVKQAKAVVTFADAMKKKAQTDNVFLLGDF 742 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N + + +D+ + + A K L Sbjct: 743 NSYTQEDPMQEFYKAGYVDAGEKFEAEP-------TYVFGGQLGSLDHVLANDAAAKGLK 795 Query: 272 QESFSEILYNEDDIKSRGK--------------RLSDHCPISIDYD 303 I E + R SDH P +D+D Sbjct: 796 GAYTWTINSRESVALEYSRYNYNVTNFYDPSPFRSSDHDPTIVDFD 841 >gi|149246876|ref|XP_001527863.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146447817|gb|EDK42205.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 461 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 102/331 (30%), Gaps = 55/331 (16%) Query: 24 VRLVSWNI---NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---Y 77 ++S+N+ + + SL + + + + L+ + K ++ DI+ QEM Sbjct: 134 FSVMSYNLLLRHYMWPHVYQSLPQEYLDWDSYRFPLINKTIKQMNCDIMCFQEMEYFLYK 193 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------------ 125 +K+FP + + F+ + IN S R S I + K +VL Sbjct: 194 KFWSKLFPTSEYESFFIQKSSINQS-RSSEKIDGVGIFINTKRFQVLDERKINFAKLVMK 252 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 KD SR R V L+++++ K +++ + S + Sbjct: 253 HQTKFQFTKDFVSRLLPRNTVALILKLHDK-YTDKIVYVTNTHLYWSPQFNDVKVLQTKL 311 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK------ 239 LK++I + + + GD N N + + + F Sbjct: 312 L-LAELKNYIKENYK-DASVIFLGDLNSNFNS-DVYRLLSEGLVDFTTAKSFSGKNYGLG 368 Query: 240 ------------------------EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + + + +D+ + +N + + Sbjct: 369 NALIDHNGKIQSPFNLSSAYQTLKDTNMLNFTSFAPSFADVLDHIFVSENIHVHKVISGV 428 Query: 276 SEILYNE--DDIKSRGKRLSDHCPISIDYDF 304 + SDH PI+ + + Sbjct: 429 DNDYCKNLPVRGFPNDQFPSDHIPIAAEVSY 459 >gi|115402263|ref|XP_001217208.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114189054|gb|EAU30754.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 604 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 74/346 (21%) Query: 6 VLALVFFLVPCTASVAQKVR---------LVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 + AL TA++ + S+N+ L+ ++ + Sbjct: 270 LTALTVTGSNETAAMPTTLTSNGSCSAMAFGSYNVENLTPN-------------STHLSK 316 Query: 57 LRQYAKNL--DADIVFLQEMGSYNAV-----------------AKVFPKNTWCIFYSTER 97 + + ++FLQE+ N F + + Sbjct: 317 IAGHIVEYLKCPTVMFLQEIQDNNGATNDGVVSANRTLSTLIREIQKQGGIKYDFVNIDP 376 Query: 98 LINHSKRDSNNDIHTAIAVRKKNVRVLQ------------------QSYPLLGAKDSFSR 139 + + +I A VR+ + P L + + Sbjct: 377 VDGRDGGEPGGNIRVAYLYDPSVVRLRNANPGSSTDANEVLSGAELKYNPGLIDPSNSAW 436 Query: 140 AGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKD 193 A +R+ + E + + +++H S S+E P S QA+ + + Sbjct: 437 ADSRKPLAAAWETLEGQARFFTVNVHFTSKGGGSSIEGDARPPVNGGIDQRSAQAKVVGN 496 Query: 194 WITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 +I++ + AGDFN + + L + Sbjct: 497 FISEILSEDSSAKIITAGDFNEFAFARPLE--VFSAVSGLQDLDDVAGVSKTERYTYLYD 554 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N +D+ + E + + ++ SDH P Sbjct: 555 ANCQQLDHMYVSDALTTEAQIEHIHV-----NTWVAYEEQASDHDP 595 >gi|259417747|ref|ZP_05741666.1| exodeoxyribonuclease III [Silicibacter sp. TrichCH4B] gi|259346653|gb|EEW58467.1| exodeoxyribonuclease III [Silicibacter sp. TrichCH4B] Length = 262 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 28/308 (9%), Positives = 67/308 (21%), Gaps = 75/308 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAV 80 L +WNIN ++ + + D++ LQE S Sbjct: 2 SFTLATWNIN----------------SVRLREPIVIKLLQEEGPDVLCLQECKSPVEKIP 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + F + + + +A+ + + Sbjct: 46 MEAFRELGYQHMI-----------ARGQKGYNGVAILSRLPIEDVGDKDFASLGHARH-- 92 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 V +E + + + ++ + D + + ++DW + Sbjct: 93 -----VAGRLENG---VTIHNFYVPAG--GDEPDREKNVKFGQKLDYLTEMRDW--FHAD 140 Query: 201 SLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRC 245 V+ GD N D + ++ Sbjct: 141 RPEKSVLVGDLNIAPREDDVWDHKKLLKVVSHTPIEVEHLAQVMEAGGWADVTRKDIPEG 200 Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ + ++ SDH Sbjct: 201 QLYSWWSYRAKDWDAADKGRRLDHVWTTPDITNAAHSS-------RILRGARGWEKPSDH 253 Query: 296 CPISIDYD 303 P+ +D Sbjct: 254 APVFATFD 261 >gi|227502024|ref|ZP_03932073.1| exodeoxyribonuclease III [Corynebacterium accolens ATCC 49725] gi|227077308|gb|EEI15271.1| exodeoxyribonuclease III [Corynebacterium accolens ATCC 49725] Length = 269 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 29/294 (9%), Positives = 72/294 (24%), Gaps = 47/294 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WNIN + D D++ LQE + Sbjct: 1 MRITTWNIN----------------SVRTRAQRALDLLHTHDIDVLCLQETKVKDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ K + + + Sbjct: 41 ------KFPRVAFEDAGYHVTCHGLNQWNGVAIISKEQPEEVFTGFPHQPGFAKDPEKPQ 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC-------SLLSQQAQWLKDWIT 196 + + + + +++ + + Y + Q++ L Sbjct: 95 DREARALGARIRGVEIWSLYIPNGREITDRHYDYKLDFLYQLARYAAGRAQSKLLLTGDF 154 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL----- 251 F K + ++ ++ + + + + Sbjct: 155 NIAPRDEDVWDIEAFRGKTHVTEPERAAFQMLEEAGLEEVTRRFTEDQRYTYFDYKGMRF 214 Query: 252 --RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ID+ + K D + G++ SDHCP+ D+D Sbjct: 215 HKNEGMRIDFQLASPPLAK-------HVTGARVDMEERAGEKTSDHCPLHADFD 261 >gi|158341378|ref|YP_001522543.1| hypothetical protein AM1_G0049 [Acaryochloris marina MBIC11017] gi|158311619|gb|ABW33229.1| hypothetical protein AM1_G0049 [Acaryochloris marina MBIC11017] Length = 401 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 89/311 (28%), Gaps = 53/311 (17%) Query: 5 YVLALVF----FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 + L+L F+ ++A+++++V++N+ + ++ + D + Sbjct: 14 FSLSLCLVFSDFVFADGCALAEELKVVTFNVESGNDTD--------PNMVARDMQAIPDV 65 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 D+ L E+ + +A + + S I K Sbjct: 66 ------DLWGLSEVENQSAADTFLQA-------AGDSNFESILGTSGGSDRLQIIYDKSK 112 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + L S L R+ + E+ L S Sbjct: 113 LNKLNSSPMELTGIGGD-----RKPLVEEFEVISDNTKFLFAVNHF----------NRGS 157 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTIDPNDSL 234 +QA+ +DW ++ +P V GD+N + F + + Sbjct: 158 ARKRQEQARKFRDWAGRQ---TLPVVAVGDYNFDFDISAMDGNPAFEIFFEEPVFSWARQ 214 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 N +D+ + +A K+ Q + + SD Sbjct: 215 TCLSSNTCPSTGTQCNECFDGLLDFIFLSGDAKKWSNQSEI--LFKGSSFCDNDPTGASD 272 Query: 295 HCPI--SIDYD 303 H P+ ID D Sbjct: 273 HFPVQAIIDLD 283 >gi|15612480|ref|NP_224133.1| exodeoxyribonuclease III [Helicobacter pylori J99] gi|4156036|gb|AAD06994.1| EXODEOXYRIBONUCLEASE [Helicobacter pylori J99] Length = 250 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++DAD+ +QE + + + Sbjct: 1 MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + + D R Sbjct: 42 QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGIDIKEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + ++++++ + S + + + L+ Sbjct: 91 -----VVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFSELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKDIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|146294023|ref|YP_001184447.1| endonuclease/exonuclease/phosphatase [Shewanella putrefaciens CN-32] gi|145565713|gb|ABP76648.1| Endonuclease/exonuclease/phosphatase [Shewanella putrefaciens CN-32] Length = 396 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 45/371 (12%), Positives = 93/371 (25%), Gaps = 93/371 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +++ S N+ E S + L ++ + DIV QE+ S + Sbjct: 23 IKIASINLFNFIEPPLAYYDFENIYSHGQWQKKCQWLSEFIAHRQPDIVGFQEVFSPEPL 82 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137 ++ + +++ A+A R V + + S Sbjct: 83 KRIAREQG-LGYFAVVDEPTLISDYIYRSPVVALASRYPIVEISSVEPDTRLVAAMGLSS 141 Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENT-------------------- 176 A +R+ + VE+ K +H KS +LE Sbjct: 142 EFAFSRKVLRATVEVPHIGKCDYYVVHFKSKRAGLALEPKLFEHQPLGHQPLSLDNLAPA 201 Query: 177 ------------------YSPSCSLLSQQAQWL-KDWITQKKESLVPFVIAGDFNRKI-- 215 S +A L + +++ES P ++ GDFN + Sbjct: 202 ASMKLHSETQLLTEQALGRWASTMQRGAEAALLFNGILVRRQESKHPVIVMGDFNDSLSM 261 Query: 216 -------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN---------------- 246 + + + F + + Sbjct: 262 GALDALTIQGESIHSNDIKAAGLGHLSDAALVAVFAQYQLKDAYELFIEANLRDSLTGNT 321 Query: 247 ---------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKR 291 + +DY ++ + + Y D R Sbjct: 322 AYHREHRAATHYYGPKGSVLDYILLSSEFDASHGRSLAQVVDYQTCDRHLVRPEYERDAY 381 Query: 292 LSDHCPISIDY 302 +DH P+ ++ Sbjct: 382 STDHAPVIVEL 392 >gi|327356664|gb|EGE85521.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Ajellomyces dermatitidis ATCC 18188] Length = 779 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 40/358 (11%), Positives = 88/358 (24%), Gaps = 75/358 (20%) Query: 22 QKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 K +S+N + + + L+ K +ADIV LQE+ + Sbjct: 384 DKFTALSYNTLCDRSATHQQHGYAPSRALAWEYRRDLILNEIKGYNADIVCLQEIDQGSY 443 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL--- 131 + + + ++ + K + + + Sbjct: 444 HGFFREQLAYNDYKGVYWPKGRAQGMPEEEAKVVDGCATFFKGSKYILLEKNMIHFGQTA 503 Query: 132 -------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 G D ++R + + ++ ++G+++ V+++HL ++ + Sbjct: 504 VRRPDAKGQDDIYNRLWQKDNIAVVTYLENRLSGERLIVVNVHLYWDPAYKDVKLIQAAI 563 Query: 181 CSLLSQQAQWLKDWITQKKESLV---------------------------------PFVI 207 Q I + P +I Sbjct: 564 LMEEVTQLAEKYSKIPACTDKTAFRFSEPENSADGDGTATPVEPAPSVEYSSGSQIPLII 623 Query: 208 AGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NA 247 GDFN ++ + + F + Sbjct: 624 CGDFNSYPGSAVYELMSRGHLIEDHPDLEKRLYGNLSRRGMSYPFNLKSAYGAIGELDFT 683 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISIDYDF 304 N IDY NA + + Y + SDH + ++ F Sbjct: 684 NYTPDFADVIDYIWYTSNALQVTGLLGAVDKSYLQRVPGFPNYHFPSDHLALMAEFSF 741 >gi|224088166|ref|XP_002308351.1| predicted protein [Populus trichocarpa] gi|222854327|gb|EEE91874.1| predicted protein [Populus trichocarpa] Length = 602 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 42/348 (12%), Positives = 88/348 (25%), Gaps = 64/348 (18%) Query: 19 SVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 S ++S+NI + + E S + L + ADIV LQE+ S Sbjct: 247 SSTGTFTVLSYNILSDVYATNETYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQS 306 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL----- 131 + P+ + + + + N A + R + Sbjct: 307 DHYEEFFAPELDKHGYQALYKRKTNEVYAGNTHTIDGCATFFRRDRFSHVKKYEVEFNKA 366 Query: 132 --GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT------------Y 177 D+ + R+ + + + V+ S +D+ + Sbjct: 367 AQSLTDALVPSAQRKTALNRLVKDNVALIVVLEAKFSNQGVDNPGKRQLLCVANTHINVH 426 Query: 178 SPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + Q L + + + +P ++ GDFN ++ +DP + Sbjct: 427 QDLKDVKLWQVLTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHSLLAMGKVDPLHPDLV 486 Query: 237 FPKE-----------------------------------------KDSRCNANKNLRNKI 255 + N Sbjct: 487 VDPLGILRPHNKLTHQLPLVSAYSSFARVGVGLGSDQQRRRMDATTNEPLFTNCTRDFIG 546 Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +DY + + E E +D + SDH + ++ Sbjct: 547 ALDYIFYTADSLMVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 594 >gi|218440705|ref|YP_002379034.1| endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424] gi|218173433|gb|ACK72166.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424] Length = 333 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 37/321 (11%), Positives = 92/321 (28%), Gaps = 40/321 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWK--NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + ++ ++N+ L+ S T + Q + + ADI+ QE+ A Sbjct: 6 KTFKVGTFNLYNLALPNQTFHRFLHYSNHDYELKTTWIAQQLERMQADIIGFQEVIHTEA 65 Query: 80 V-AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + + + K I + +++ + + Sbjct: 66 LLETIALAKGYEKMNLVVPETENYKSTVALACKFPILDYQIYTVFPPEAHFNVQGVNIPF 125 Query: 139 RAGNRRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD---- 193 ++ + + +++ K I + +HLKS + QA+ L Sbjct: 126 ERFSKPILSVRIKLTQKIICTLFVVHLKSKAPIIPGNCDPRDPAERARGQARALILRAAE 185 Query: 194 -------WITQKKESLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDP 230 I K++ P ++ GD N + W + Sbjct: 186 ATALRMILIETLKDTNHPVIVMGDVNDGGLAVTSQIITGDPPRKNERREYKKEAWDILLY 245 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD-------QNAYKFLIQESFSEILYNED 283 + I+ + + + + + +D+ ++ N + S +D Sbjct: 246 SVKDIQERQSHGNYYYTHIHNGHYQSLDHILVSQEWIAHNPNRLGRVKYVSVFNDHLIDD 305 Query: 284 DIKSRGK--RLSDHCPISIDY 302 + SDH + + Sbjct: 306 TLSDEELPCWQSDHGQVVASF 326 >gi|89902688|ref|YP_525159.1| exodeoxyribonuclease III [Rhodoferax ferrireducens T118] gi|89347425|gb|ABD71628.1| exodeoxyribonuclease III [Rhodoferax ferrireducens T118] Length = 263 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 33/274 (12%), Positives = 75/274 (27%), Gaps = 58/274 (21%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L + D + +QE+ K + F L H + ++ + + Sbjct: 20 LEAWLTKTQPDCICVQEV-------KAQALDVQDRFEHLAGLRGH-FHFAEKKGYSGVGL 71 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 ++ + D+ R VEL + K ++ + S + + Sbjct: 72 YSRHEPSDVRVGYGSSQFDAEGRY-----VELRFDTPSAKRSIISCYFPSGSSGEERQQA 126 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGN 220 L ++ F++ GD N Sbjct: 127 KFRFLEEFYLHLAQL--------KNGREFILCGDVNIAHQEIDLKNWKGNRKNSGFLPEE 178 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCN-ANKNLRNK---------IPIDYFVMDQNAYKFL 270 K + + + + + + + A N+ +DY + Sbjct: 179 RAWMTKLLTEAGLVDVYRQLQPTATDEAYTWWSNRGQAYAKNVGWRLDYHLATPAMAALA 238 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 E+ + ++ SDH P++I+YD+ Sbjct: 239 RSETI-----------YKAEKFSDHAPLTIEYDW 261 >gi|315047122|ref|XP_003172936.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Arthroderma gypseum CBS 118893] gi|311343322|gb|EFR02525.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Arthroderma gypseum CBS 118893] Length = 604 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 39/340 (11%), Positives = 75/340 (22%), Gaps = 79/340 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +RL +WN+N + W R + + + ADIV QE + + Sbjct: 3 LRLTTWNVNGIRNPFSYEPW-----RGNRTFGAMFDILE---ADIVVFQEAKIQRKDLQD 54 Query: 82 KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + W ++S + +S A+R + P A Sbjct: 55 DMVLVPGWDCYFSLPRQKKGYSGVVIYTRSSKCAAIRAEEGITGTLCPPNSSTPFRQLTA 114 Query: 141 -----------GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS--LLSQQ 187 E+ + L + +F + Sbjct: 115 SEQIGGYPSVEQMEELSEVDPTTLDSEGRCLIVEFPAFVLIGVYCPANRDESRDGFRLGF 174 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKIN----------------------YLGNNDDFW 225 L+ + + ++ GD N F Sbjct: 175 LSLLEARVRNLIKMGKRVILTGDLNISPAAIDSAPATERIKKNTETEEEYVSSPARRLFN 234 Query: 226 KTIDPNDSL-------------IRFPKEKDSRCNANKNL---------RNKIPIDYFVMD 263 + S + +R IDY + Sbjct: 235 GLVRRVGSTEETHDIEASPVLRDLCREFHPNRTGMYTCWEQRVNARPGNYGSRIDYILCS 294 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + ++ + G SDHCP+ Sbjct: 295 DDIRPWFVESNIQ-----------EGLMGSDHCPVYASIS 323 >gi|289706866|ref|ZP_06503207.1| endonuclease/exonuclease/phosphatase family protein [Micrococcus luteus SK58] gi|289556416|gb|EFD49766.1| endonuclease/exonuclease/phosphatase family protein [Micrococcus luteus SK58] Length = 925 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 45/352 (12%), Positives = 86/352 (24%), Gaps = 75/352 (21%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS---------------------- 52 +V V + S+N+ G + S R + Sbjct: 500 AAPEAVGGNVTVGSFNVLNYFTTLGQDVAGCSAYRDRAGTPVTTNGCLPRGAYTPEAFAR 559 Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYN---------------AVAKVFPKNTWCIFYSTER 97 + L +V L+E+ + A+ + W S Sbjct: 560 QQEKIAAAINGLGTSVVALEEIENSEKFGLDRDHALAHLVEALNAQAGEQRWAFVASPAE 619 Query: 98 LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN-----RRAVELLVEI 152 + D I +A + V + +S L + + R A Sbjct: 620 RPALADEDV---IRSAFIYQPAEVTPVGESVILDDQTNFDNAREPMAQLFRAADGTSEGA 676 Query: 153 NGKKIWVLDIHLKSFCFLDSLENT------YSPSCSLLSQQAQWLKDWITQKKESL--VP 204 G + + H KS + + QA+ L + + K Sbjct: 677 AGTEFVAITNHFKSKGGSGATGGNVDSGDGQGAYNADRVGQAEALVAFAERMKAETGTDR 736 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 ++ GDFN + ++ + + + +D Sbjct: 737 VLLMGDFNAYEKEDPI-----RVLEAAGY---VSQGALTGEYSYAFGGAVGSLDGIYASP 788 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGK--------------RLSDHCPISIDY 302 +A + + I NE + R SDH PI + Sbjct: 789 SAAAAITGQDIWMINANESVALEYSRHNYVAEDLYSADQWRSSDHNPILVGL 840 >gi|256783093|ref|ZP_05521524.1| hypothetical protein SlivT_01240 [Streptomyces lividans TK24] Length = 288 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 33/285 (11%), Positives = 73/285 (25%), Gaps = 61/285 (21%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA--- 81 R+++WN+ S+ ++ +QE + + Sbjct: 57 RVMTWNLCN--------------PCDASNLDRAAD-IAAHAPQVIGMQEACARDVDRIRD 101 Query: 82 --KVFPKNTWCIFY-STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + F + + + S + + N A+ + Sbjct: 102 YLEAFHGLVYHVAHGSVLQNWSRCGGAPWNPGGFGQAILSAAPITDAVNVEYPDGG---- 157 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + +R + + E+ G+ + V + HL + Q + L + + Sbjct: 158 -SEDRGYLAVTTEVGGRSVRVFNTHL-----------AQRRQEEFRTDQVRVLAKEVARH 205 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + + ++ GDFN D W D C + + D Sbjct: 206 ERA----IVVGDFNAVP-EASELDPMWSLATDTDPQCHPAPG--GTCEPTTDWQ--SKFD 256 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 Y + + + SDH + D D Sbjct: 257 YVFLRG-----VAPREHRVVRTAH----------SDHDLLYADLD 286 >gi|164426814|ref|XP_961458.2| hypothetical protein NCU03682 [Neurospora crassa OR74A] gi|157071489|gb|EAA32222.2| conserved hypothetical protein [Neurospora crassa OR74A] Length = 289 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 77/296 (26%), Gaps = 21/296 (7%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P S VR VS+NI + V + +R L D+ + LQE+ Sbjct: 7 PAPGSAQLHVRFVSFNIR-FATDNPVPGEQPWTERRPRLCAQLNFLTSGHDSTFLCLQEV 65 Query: 75 GSYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + +W + S + P Sbjct: 66 LYSQLLDIQDSLGPSWSHIGRGREDGKLAGEFSPIFFRVDEWDCEDWKTYWLSETPERP- 124 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + R V+ + F + S L+ A + Sbjct: 125 SIGWDAVLERIVTVGSFRHKTTSKAVIVMSTH---FDHRGQIAREESSKLILMLA---SE 178 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 W +S P V+ GD N D+ FP E Sbjct: 179 WRRTHGDSYPPLVLGGDLNSTPTDQAYKTLTSSDSGLQDTSAVFPDELKYGNRDITYTSF 238 Query: 254 KIP------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 P ID+ + LI F + DD G LSDH PI +D + Sbjct: 239 GEPDEEPKTIDFLFV--QRPPTLILRLFGILPNKFDD----GVFLSDHRPIFVDME 288 >gi|15646134|ref|NP_208316.1| exodeoxyribonuclease III [Helicobacter pylori 26695] gi|2314703|gb|AAD08563.1| exodeoxyribonuclease (lexA) [Helicobacter pylori 26695] Length = 250 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++DAD+ +QE + + + Sbjct: 1 MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + + D R Sbjct: 42 QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINMEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++++++ + S + + + L+ Sbjct: 91 -----VITCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFSELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|71737405|ref|YP_272561.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|257481811|ref|ZP_05635852.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289627987|ref|ZP_06460941.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646455|ref|ZP_06477798.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. aesculi str. 2250] gi|298485207|ref|ZP_07003300.1| Endonuclease/exonuclease/phosphatase family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71557958|gb|AAZ37169.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298160195|gb|EFI01223.1| Endonuclease/exonuclease/phosphatase family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320322199|gb|EFW78295.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. glycinea str. B076] gi|320331850|gb|EFW87788.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330866580|gb|EGH01289.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330872976|gb|EGH07125.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330986813|gb|EGH84916.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009446|gb|EGH89502.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 291 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 38/292 (13%), Positives = 81/292 (27%), Gaps = 58/292 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 ++RL+S+NI + + + + + D D+V L Sbjct: 30 PEDGRLRLLSFNIQVGISTQRYHHYLTRSWQHLLPHGGRAGNLQKIGDLIN--DFDLVAL 87 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE+ + + + R+ + V + + +PL Sbjct: 88 QEVDGGSMRSGFVNQVEHLAQLGGFPYWYQQLNRNLGRLAQHSNGVLSRLRPTKIEDHPL 147 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G R A+ + + V+ +HL ++Q + Sbjct: 148 PGPAG-------RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQLAY 187 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 ++D I V+ GD N N L + + + Sbjct: 188 IRDLIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 233 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + +D+ ++ +Q I SDH P++++ Sbjct: 234 WRPQRCLDHILLSPTLTLERVQVLAQPI--------------SDHLPVAVEI 271 >gi|260062521|ref|YP_003195601.1| exonuclease III [Robiginitalea biformata HTCC2501] gi|88784086|gb|EAR15256.1| exonuclease III [Robiginitalea biformata HTCC2501] Length = 254 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 78/304 (25%), Gaps = 75/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++SWN+N + G + ++LD D++ LQE+ + + + Sbjct: 1 MKIISWNVNGIRAISGKGF---------------AGHIEDLDPDVLCLQEIKADTEIVEE 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ A+ KN P R Sbjct: 46 IAGQLPGYAVHVHPAEK--------KGYSGTALLLKNAEAGVDRGPETDLLQGEGRI--- 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +++ ++ + + + + L+D Sbjct: 95 ------LRADLGDFNLVNTYVPNSGANLKRLDFREEWDAAFLEYLNGLRDH--------K 140 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI---------------RFPKEKDSRCNAN 248 P V+ GD N + +D +++ A Sbjct: 141 PLVLCGDLNVAHRPIDLKNDKANYNKTAGYTQREIDGMDRLHQSGLIDIFRKRHPDEVAY 200 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYF++ + SDHCPI Sbjct: 201 TYWSYRFGARKRNVGWRLDYFLISPELEGRVAGTPIYH-----------NIEGSDHCPIG 249 Query: 300 IDYD 303 ++ D Sbjct: 250 LELD 253 >gi|88704257|ref|ZP_01101971.1| conserved hypothetical protein, secreted [Congregibacter litoralis KT71] gi|88701308|gb|EAQ98413.1| conserved hypothetical protein, secreted [Congregibacter litoralis KT71] Length = 400 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 44/385 (11%), Positives = 98/385 (25%), Gaps = 86/385 (22%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNI--NTLS------EQEGVSLWKNSVKRTTSDYTL 56 +++ V + S A+ +R+ ++N+ + G L Sbjct: 13 FLILGVLLMPAGAHSEARVLRVATFNVSMEGGNYVGKGVTPSGHELPAALSNSEHPQIKN 72 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKN---------------TWCIFYSTERLIN- 100 + + + + D++ L E + + + +Y Sbjct: 73 IAEIIQRIRPDVLLLNEFDYHADPERGVKPFIERYLQQSQTDVEAIDYPYYYQGPVNTGV 132 Query: 101 -------HSKRDSNND----------IHTAIAVRKKNVR--------------------- 122 S + + + Sbjct: 133 DSGMDLDRDGEASGTGNDAFGYGLYPGQYGMLLLSRYPIDFEAIRSFQLFKWKDMPDNLM 192 Query: 123 ----VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 A R ++ ++ V ING + VL H F + Sbjct: 193 TDMRTETNELWYPEAVQKVLRLSSKSHWDVPVRINGNVLHVLASHPTPPVFDGPEDRNGR 252 Query: 179 PSCSLLSQQAQWL-----KDWITQKKE-----SLVPFVIAGDFNRKINYLGNNDDFWKTI 228 + + ++ D+I ++ FVI GD N + + + Sbjct: 253 RNHDEIRFWVDYIEGGEQADYIYDDRDQPGGLKDERFVILGDLNASMEEGDARREGITAL 312 Query: 229 DPNDSLIR---------FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 +D + R DSR + I DY + + ++ + F Sbjct: 313 LGHDKVRRGLLPTSDGGRANNADSRFSPTHTASWGIRADYVIPSKKGWRVIDAGVFWPAP 372 Query: 280 YNEDDIKSRGKRL-SDHCPISIDYD 303 + + +R SDH + +D + Sbjct: 373 GDPLRRLVKNRRASSDHRLVWMDLE 397 >gi|317478347|ref|ZP_07937511.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] gi|316905506|gb|EFV27296.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] Length = 366 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 83/301 (27%), Gaps = 64/301 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++L+S+NI + Y K ADI+ LQE + + Sbjct: 101 SIKLLSYNIMGFDGAAKQDGKNP-----------ILTYLKESGADILCLQEYSTVQSSKH 149 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + K+ + ++ S IA K + + Sbjct: 150 LSQKDVERELKAYPYHRINT-VGSGKGHTNKIACYSKFPILSSRILDYPS--------EY 200 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSL-----------------------ENTYSP 179 +V ++I + +++ HL+S + + Sbjct: 201 NGSVLYEIKIGEDTVTLINNHLESNKLTKADKVVYEDMLKSPEKEKVKSGARLLIRKLAE 260 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + ++ + QA + I ++ GDFN + + +D F + Sbjct: 261 ASAIRAPQADTIAHEI--TASPHPYIIVCGDFNDTPISYT-HRTIAQDLDD-----AFTQ 312 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + R ID + +N + + R + SDH PI Sbjct: 313 SGRGLGISYNQNRFYFRIDNILTSKNLRAY-------------NCTVDRSIKESDHYPIW 359 Query: 300 I 300 Sbjct: 360 C 360 >gi|308185296|ref|YP_003929429.1| exodeoxyribonuclease III [Helicobacter pylori SJM180] gi|308061216|gb|ADO03112.1| exodeoxyribonuclease III [Helicobacter pylori SJM180] Length = 250 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++DAD+ +QE + + + Sbjct: 1 MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + + D R Sbjct: 42 QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGIDIEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + ++++++ + S + + + L+ Sbjct: 91 -----VVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFSELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKDIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|288927425|ref|ZP_06421272.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 317 str. F0108] gi|288330259|gb|EFC68843.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 317 str. F0108] Length = 344 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 42/348 (12%), Positives = 100/348 (28%), Gaps = 64/348 (18%) Query: 6 VLALVFFLVPCTASVAQK-VRL---VSWNINTLSEQEGVSLWKN-----------SVKRT 50 +LAL LV ++ AQK + +N L + ++ + + Sbjct: 1 MLALSALLVVVLSAAAQKKFEVYAAGFYNQENLFDTCHDEGKRDYEFLPSGSYKWNGMKY 60 Query: 51 TSDYTLLRQYAKNLDADI--------VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS 102 T + + ++ D+ + L E+ + + + + + H Sbjct: 61 THKLHNMARALADMGTDVLPGVGCAVIGLAEVENAKVLTDLTAQPE---LAARGYKFCHI 117 Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 + I A+ V P + + + S R + + + G+ + V+ Sbjct: 118 EGPDRRGIDCALLYNPALFAVRNVKLVPYVQSLEKDSAFYTRGFLTVSGTLAGEHVTVVV 177 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 HL S + Q ++D + Q+++ ++ GD N + Sbjct: 178 CHLPSRFSDSFYREQGAR-------QILAIRDSV-QREDKDCKVLVMGDMNDDPMDKSIS 229 Query: 222 DDFWKTID------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + + + + + D ++ +N + F Sbjct: 230 QGLHGKANMSEVGQGDMYNPWYNVLTKEGVGTLQFQGSWNLFDQILLSKNLLNANGSKDF 289 Query: 276 SEILYNEDDIKSRGK-----------------------RLSDHCPISI 300 + + Y ++ I R SDH P+ + Sbjct: 290 TALKYWKNQIFKRDYLFQTEGKYKGTPKRTTAGGVWLDGFSDHLPVVV 337 >gi|297170635|gb|ADI21660.1| metal-dependent hydrolase [uncultured Rhizobium sp. HF0130_09F11] gi|297171574|gb|ADI22571.1| metal-dependent hydrolase [uncultured Rhizobium sp. HF0500_10F10] Length = 248 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 78/280 (27%), Gaps = 52/280 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 R+ S+NI K+ + LDADIV LQE+ ++ Sbjct: 2 FRVASYNIR-----------KSVGTDWRRRPKQILDVLTELDADIVALQEV-DRRLGDRL 49 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + I T + + + L + L+ R Sbjct: 50 SSLSPSLIAEMTHFRPIRFGVRPGSLGWHGNTILVRKDVELLRRKRLV-----LPALEPR 104 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A ++I KI V+ +HL +QA+ + D + E + Sbjct: 105 GAALADLQIGDLKIRVVGMHLGLVGLW-------------RKRQARAVLDQLAS-LEEPL 150 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 P V+ GD N+ W T + + + + + D + Sbjct: 151 PTVMMGDLNQ-----------WNTEGGCLAHFAEDHHVIAPGLSFHSQMPFVSFDRIITS 199 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + R + SDH P+ D Sbjct: 200 LDIHVDAAAV----------HSSERARLASDHLPVWADLS 229 >gi|317482487|ref|ZP_07941503.1| exodeoxyribonuclease III [Bifidobacterium sp. 12_1_47BFAA] gi|316916039|gb|EFV37445.1| exodeoxyribonuclease III [Bifidobacterium sp. 12_1_47BFAA] Length = 286 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 34/311 (10%), Positives = 80/311 (25%), Gaps = 57/311 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VA 81 + + + N+N + + + +A D+ +QE+ + V Sbjct: 2 TITITTSNVNGIRA---------------AKRKGIEDWAGKHAPDVWCIQEVRAPQDDVD 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRD----SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +F + + + + + + + + ++ ++D Sbjct: 47 SIFDEFGFEYATAGKIEAPANLHAMNEVCRVKGRAGVGLLTDLEVLAKRYGLPGLSEDVD 106 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 S R + G + V +++ + D L + + + Sbjct: 107 S---GRWIETDVKTPEGYTVTVASVYVHAGNTDD--PTKMEQKYRFLDTMLKRMGALRDE 161 Query: 198 KKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEK 241 V+ GDFN K +D + + Sbjct: 162 AAHGGKQAVLCGDFNIAHTPLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLA 221 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + IDY + + + D + KR Sbjct: 222 GDIQGPYTWWSQRGRAFDNNVGWRIDYQFATPELAE-------TARGFVIDKAPTYDKRW 274 Query: 293 SDHCPISIDYD 303 SDH P++I Y+ Sbjct: 275 SDHAPLTITYE 285 >gi|295133317|ref|YP_003583993.1| endonuclease/Exonuclease/phosphatase family protein [Zunongwangia profunda SM-A87] gi|294981332|gb|ADF51797.1| endonuclease/Exonuclease/phosphatase family protein [Zunongwangia profunda SM-A87] Length = 349 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 39/327 (11%), Positives = 94/327 (28%), Gaps = 68/327 (20%) Query: 1 MIRKYVLALVFFLVPCTASVA------------QKVRLVSWNINTLSEQEGVSLWKNSVK 48 M R+ +L+L+ +V + + ++++N+ ++ Sbjct: 64 MKRQMILSLLIMIVGFGFASKFYRWPFSDDNTRGEYSIMNYNVRMFNKSNWTDEKNIP-- 121 Query: 49 RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108 + K D DI+ ++E + K + + ++ Sbjct: 122 ------EKINDIIKEADPDILTIEEYYKNEYLEK--------------KYPYKFIKYRSD 161 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 A+ K + ++S + A+ + I I + +IH +S Sbjct: 162 KSSFGQAIFSKFPLLAKRSLDFHVDNFTGDN---NNAIFTDIIIKKDTIRLYNIHFQSLQ 218 Query: 169 FLDSLENTYSPSCSL------------LSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216 + ++ + +Q + S P +I+GDFN Sbjct: 219 VTEDVQEVDNFKNKQESKKVIKNISSGFVRQQNQSERVKRSIDSSEYPVIISGDFNNTAF 278 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 N + + F K+ + + ID+ ++ Sbjct: 279 SYTYNQ-----VRNDRFQDAFVKKGAGFSSTYNLNYFPLRIDFHLL-------------- 319 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303 + ++ + + SDH PI + Sbjct: 320 DTVFEINSYERIKVPYSDHYPILTTFS 346 >gi|92115724|ref|YP_575453.1| exodeoxyribonuclease III (xth) [Nitrobacter hamburgensis X14] gi|91798618|gb|ABE60993.1| exodeoxyribonuclease III (xth) [Nitrobacter hamburgensis X14] Length = 293 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 77/309 (24%), Gaps = 64/309 (20%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + ++ L +WN+N L+ ++ K D++ LQE Sbjct: 22 SMQITLTTWNVN----------------SVRLRIDLVAKFLKAQRPDVLCLQETKCP--- 62 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 FP + RL + + +AV K DS Sbjct: 63 DDAFPLKRFR------RLGYEHVALNGQKGYHGVAVVSKLPFDASNIRTFCDKIDSRHVG 116 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 L + + + ++ + D + +P + Q +K Sbjct: 117 VTLGGEAGLA----APLVLHNFYVPAG--GDIPDPALNPKFAHKLQFLDEMKACTPLHPR 170 Query: 201 SLVPFVIAGDFNRKINYLG--NNDDFWKTIDP--------------NDSLIRFPKEKDSR 244 V+ GD N + ++ K + + + Sbjct: 171 DGDRHVLVGDLNVAPHEHDVWSHKQLLKIVSHTPVECEKLLGLQSHGNWVDIARARIPMS 230 Query: 245 CNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + +D+ + + + + +R SD Sbjct: 231 EKVYTWWSYRAADWVAANRGRRLDHIWVSEALRGGIRD-------FRITRAARGWERPSD 283 Query: 295 HCPISIDYD 303 H P++ + Sbjct: 284 HVPVTAVIE 292 >gi|50926167|gb|AAH79505.1| Zgc:101000 [Danio rerio] Length = 270 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 34/287 (11%), Positives = 82/287 (28%), Gaps = 35/287 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK- 82 +++ S+N+ + S + L + DI+ + E+ A Sbjct: 1 MKVASFNVQKFGK---------SKLSDPAVLQTLIKIVSRY--DIIVILEVVDSKGRAMD 49 Query: 83 --VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + N + ++ N R+ V + SY + A Sbjct: 50 NFLKELNKFDKKAHYTMELSTRLGRGNYKEQFMFLYREDVVEL-VGSYQYKDDQPGDEDA 108 Query: 141 GNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R L + + + ++ +H K + ++ Y + + Sbjct: 109 FAREPYILRFKCPNAVLEDLVLMPVHTKPEDSVKEIDELYDVFQDVRKKW---------- 158 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 +I GDFN +Y+ + I + + + + N I Sbjct: 159 ---KTDNIMILGDFNADGSYVSDKKMKQIRIRSDPEFHWLISDDEDTTASTHNDNTYDRI 215 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDY 302 + + + ++ S + ++SDH P+ ++ Sbjct: 216 --VIYGDDMMQAVVPGSAKPFNFQTAFSLTEEDALKVSDHYPVEVEL 260 >gi|329120913|ref|ZP_08249545.1| exodeoxyribonuclease III [Dialister micraerophilus DSM 19965] gi|327471372|gb|EGF16823.1| exodeoxyribonuclease III [Dialister micraerophilus DSM 19965] Length = 254 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 39/308 (12%), Positives = 81/308 (26%), Gaps = 82/308 (26%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++ +SWN+N L + KNL+AD LQE Sbjct: 2 NNLKYISWNVNGLRACIKKGFLDS---------------FKNLNADCFCLQETKLQPHQI 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + + S ++ A+ K + Sbjct: 47 ELDIPGYYQYWNSAI-----------KKGYSGTALFTKIKPISVS--------------- 80 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE- 200 + +E + ++ ++ K+ + + L + +W D+ + Sbjct: 81 ----YGMNIEEHDQEGRLITAEFKNHFLVVCYTPNSQRQLARLEYRMKWENDFKNYLLKL 136 Query: 201 -SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSR 244 P ++ GD N + + T+ N F + Sbjct: 137 TESKPVILCGDLNVAHKEIDLANPSSNHKNAGFTDDERKKFSTLLENGFTDTFRYLYPDK 196 Query: 245 CNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 +A IDYF++ + + SDH Sbjct: 197 KDAYSWWSYFAKSRERNIGWRIDYFLVSDKLKNKIKDAKIH-----------PEIQGSDH 245 Query: 296 CPISIDYD 303 CP+ + +D Sbjct: 246 CPVELTFD 253 >gi|328767146|gb|EGF77197.1| hypothetical protein BATDEDRAFT_20862 [Batrachochytrium dendrobatidis JAM81] Length = 394 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 84/304 (27%), Gaps = 74/304 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 + ++WN+ L + +Y + DAD+V LQE ++ Sbjct: 116 KFIAWNVAGLRASLKKD---------------MMRYIEAEDADVVCLQETKMNASLDTSM 160 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 F + + + ++ + V K + + A D R Sbjct: 161 -------FSRKQYPHQYWSHCTTKKGYSGVMVLSKVKPLSVEYKMGHSAIDDEGRF---- 209 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 V + + + + ++ + + L + L+ S P Sbjct: 210 -----VILEYQDFYYIGCYIMNAGADLGRLDLKREHYVKLKKFMGELQ--------SKKP 256 Query: 205 FVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + +GD N +DF + D + F + + Sbjct: 257 VIWSGDLNVAHTEIDLARPATNTKSAGFTPEEREDFGNLLTDLDMVDSFRLKHPTATGMY 316 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DYFV+ + +I+ +Y SDH PI Sbjct: 317 SYYSFRHNSRANNVGWRLDYFVVSKALQDDIIEADIRSEIY----------GASDHVPIL 366 Query: 300 IDYD 303 + + Sbjct: 367 LLLN 370 >gi|327265943|ref|XP_003217767.1| PREDICTED: deoxyribonuclease gamma-like [Anolis carolinensis] Length = 305 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 87/305 (28%), Gaps = 36/305 (11%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 + +F L A+++ +R+ S+N+ + E + + ++ + Sbjct: 1 MLCISLFLLFAFHAALS--LRICSFNVRSFGE---------AKRTRPEIMNVIVKIISRC 49 Query: 65 DADIVFLQEMGSYNAV--AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 DI+ L E+ + K + + + A R + V Sbjct: 50 --DIMLLMEIKDNRNRICPFLLEKLNGHSQKQYRYVASGRLGRKSYKEQYAFFYRPEIVS 107 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTYSP 179 V +Q+Y + A +R + + ++ ++ +H + ++ Y Sbjct: 108 V-KQTYQYPDLQPGNEDALSREPFVVWFSSSNTVAREFVIIPLHTTPEMAVQEIDELYDV 166 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + F+ GDFN Y+ + ++ I Sbjct: 167 YQDIKQHW-------------KSENFIFMGDFNAGCGYVARRHWKDIRLRNHNEFIWLID 213 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCP 297 ++ I + + S + + + + L SDH P Sbjct: 214 DQTDTTVKASTHCPYDRI--VLHGDKLINAAVPNSANIFDFQGVFAMTEAQALAVSDHFP 271 Query: 298 ISIDY 302 + Sbjct: 272 VEFQL 276 >gi|313114917|ref|ZP_07800415.1| exodeoxyribonuclease III [Faecalibacterium cf. prausnitzii KLE1255] gi|310622794|gb|EFQ06251.1| exodeoxyribonuclease III [Faecalibacterium cf. prausnitzii KLE1255] Length = 250 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 79/303 (26%), Gaps = 77/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + LDADI +QE A Sbjct: 1 MKLISWNVNGLRACLTHGF---------------AESFAALDADIFSVQETKMQPGQADF 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P YS E ++ A + + + + D R Sbjct: 46 APDGYTEYTYSAE-----------KKGYSGTACWCREQPLSVTTGIGIEQHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 L +E G W+++ + + + L ++ Sbjct: 91 ---VLTLEYPG--FWLVNCYTPNSQDGLKRLDYRMEWEDAFRAYLLAL--------DAKK 137 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNANK 249 P ++ GD N + +D + + + Sbjct: 138 PVILCGDLNVAHREIDIKNDKTNHMSAGFTDQERGKMTELLDAGFADSFRVLHPDEVKYS 197 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF++ + + ++ SDHCP+ + Sbjct: 198 WWSYRFHAREKNAGWRIDYFIVSRRIADKIRAAEIHNEIF-----------GSDHCPVEL 246 Query: 301 DYD 303 D D Sbjct: 247 DID 249 >gi|149907902|ref|ZP_01896570.1| putative phospholipase C precursor [Moritella sp. PE36] gi|149808908|gb|EDM68839.1| putative phospholipase C precursor [Moritella sp. PE36] Length = 428 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 39/279 (13%), Positives = 83/279 (29%), Gaps = 27/279 (9%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + L+S+NI + K+ S T + D++ L E+ Sbjct: 163 GNEFSLLSYNIW--------ATTIFGSKKVDSRLTEMPAVMSGY--DVLVLTEVFDPIRT 212 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +K+ + + +++ + K + + + ++S A Sbjct: 213 SKLLKQLSKEYSFTSSEMFKLGKI-----MQSGTRILTPWPVEAEKSLKYTNCSGIQCAA 267 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT-QKK 199 R + + G V H +S + + Q + + ++I Q Sbjct: 268 -TRGVIYTRINKQGYIYHVFATHTQSSDDDTNR--------TARLAQLEEMGEFIREQNI 318 Query: 200 ESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEK-DSRCNANKNLRNKIPI 257 + ++AGDFN I G+ D ++ + + DS N + Sbjct: 319 PADEAVILAGDFNVNKIGLPGDRDQMAYILNATEPENKGHNLSFDSNTNNWAEKPYLEYL 378 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 DY + + + + LSDH Sbjct: 379 DYTLTGNDNLQPISASQEIFAPRVLTKSLWGNWDLSDHY 417 >gi|103488148|ref|YP_617709.1| exodeoxyribonuclease III (xth) [Sphingopyxis alaskensis RB2256] gi|98978225|gb|ABF54376.1| exodeoxyribonuclease III (xth) [Sphingopyxis alaskensis RB2256] Length = 264 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 32/308 (10%), Positives = 83/308 (26%), Gaps = 76/308 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAK 82 + SWNIN + ++ ++ + DI+ LQE + Sbjct: 5 SIASWNIN----------------SVRARIGIVEKFLREEAPDILCLQETKVECGLFPKA 48 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 +F + + +H +A+ + + Y ++ Sbjct: 49 MFEALGYGHIVT-----------HGQRMHHGVAIVSRLPLAEVRKYDWQANGEARH---- 93 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + + + + + ++++ + D + +P + DW + Sbjct: 94 ---IGVTLPSG---VRLDNVYIPAG--GDIPDREINPKFGQKLDFLARMTDW--SGGLNG 143 Query: 203 VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P V+ GDFN + + + +D + + Sbjct: 144 TPTVLTGDFNVAPLASDVWNHKALLDVVSHTPIEVETLARLQAASDWVDLGRHFIAAPAP 203 Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ + + + + +R SDH Sbjct: 204 LYTWWSYRAKDWEASNRGRRLDHMWVTPDLKDKAVAHRIVQ-------PARSWERPSDHV 256 Query: 297 PISIDYDF 304 P+ ++ F Sbjct: 257 PLITEFAF 264 >gi|313158592|gb|EFR57986.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 320 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 83/310 (26%), Gaps = 44/310 (14%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---Y 77 +RL+ WNI + + Y + K D D+ E S Sbjct: 26 TDDMRLLYWNIQNGMWSDQSNG-----------YDNFVAWVKGYDPDVCVWCEAQSIYKS 74 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +V + + E + + H R +V+ YP+ + Sbjct: 75 GTAERVDSVDRYLTANWGELAARYGHKYWYVGGH-----RDNFPQVVTSKYPIENVRRIV 129 Query: 138 SRAG----NRRAVELLVEINGKKIWVLDIH-----LKSFCFLDSLENTYSPSCSLLSQQA 188 +A + A + NG+ + ++ +H + Sbjct: 130 GQAPDSIVSHGAGWARIVKNGRPVNIVTLHTWPQAYAFQAVDRDASKAEHGGDRYRRMEI 189 Query: 189 QWLKDW-ITQKKESLVPF-VIAGDFNRK---------INYLGNNDDFWKTIDPNDSLIRF 237 +++ I + ++ ++ GDFN + I + + Sbjct: 190 EYICSHTIATQSDAGQQLWMMMGDFNSRSRLDNRIYNYPDDDTRLLVHDYIAEHTPYVDV 249 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----KRLS 293 EK ID+ + + + + E S Sbjct: 250 IAEKHPGEFHTTTHGQ-SRIDFVYCTPPLCERITRAEVIADDFTEPVRDPGKLSNFYHPS 308 Query: 294 DHCPISIDYD 303 DH PI +D+D Sbjct: 309 DHRPILVDFD 318 >gi|313204342|ref|YP_004042999.1| exodeoxyribonuclease iii xth [Paludibacter propionicigenes WB4] gi|312443658|gb|ADQ80014.1| exodeoxyribonuclease III Xth [Paludibacter propionicigenes WB4] Length = 253 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 32/306 (10%), Positives = 91/306 (29%), Gaps = 79/306 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++S+N+N + + +++ + + D++ LQE Sbjct: 1 MKIISYNVNGIRAALSKNF---------------QEWLQAENPDVLCLQETKAQPDQVDT 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +F + + + + + + +A+ K ++G + A Sbjct: 46 MLFAEMGYTSYLHSAEKKGY----------SGVAILSK----QAPDRVVVGMNNPVFDAE 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R ++ + + ++ +++ S D + + L+ + Sbjct: 92 GR-----VIRADFGDLSIVCVYIPSGSSGDERQAFKMQFLAAFGPFILELRK-------T 139 Query: 202 LVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 V+ GD+N +L + + + + F S Sbjct: 140 RPNLVVCGDYNICHKPIDINHPERQNGVSGFLPEERAWLDQFELDGMVDSFRVFDKSAEK 199 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDY + ++ + L + + SDHCP Sbjct: 200 -YSWWSYRGGARFRNVGWRIDYHWVTESLHTRLKSAAILTDAVH-----------SDHCP 247 Query: 298 ISIDYD 303 ++++ + Sbjct: 248 VAVELN 253 >gi|228469711|ref|ZP_04054679.1| endonuclease/Exonuclease/phosphatase family protein [Porphyromonas uenonis 60-3] gi|228308730|gb|EEK17456.1| endonuclease/Exonuclease/phosphatase family protein [Porphyromonas uenonis 60-3] Length = 352 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 38/341 (11%), Positives = 81/341 (23%), Gaps = 55/341 (16%) Query: 6 VLALVF-FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN----------SVKRTTSDY 54 +L+L F + ++ Q+V + +N+ L + + +R Sbjct: 12 LLSLSFGVIYAQHSAAPQRVTVAFYNLENLFDTINQENNDEEFLPEGANRWTPERYQHKL 71 Query: 55 TLLRQYAKNLD---ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 + + I+ + E+ + + + I H I Sbjct: 72 RNMSHVISLIGGNGPAIIGVAEIENRGVLEDLIA---QESLRDKHYNIVHYDSPDLRGID 128 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 AI + +V + + R V I+G+ + VL H S + Sbjct: 129 CAILYQPDVYKVFASGARAVVIPNEPWIK-TRDVVYASGLIDGEIVHVLVGHWPSRSGGE 187 Query: 172 SLE-NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----- 225 ++ N + + A L ++ GDFN D Sbjct: 188 AVSLNRRMAAAKTMRSVADSL-----YTLFPGSKVIMMGDFNDDPISPSVRDGLGIQKSP 242 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF---------------- 269 + +D + + D ++ Sbjct: 243 DGLKASDYYTPMLQLYNKGMGTLAYRDVWNLFDIIAVNGELIGSNPTTWQLYRDPETTDM 302 Query: 270 ----------LIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + SDH P+ + Sbjct: 303 GFIFKQPFMIQQSGQYKGYTLRTFVGGQWQGGYSDHFPVYV 343 >gi|294658206|ref|XP_460547.2| DEHA2F04158p [Debaryomyces hansenii CBS767] gi|202952957|emb|CAG88863.2| DEHA2F04158p [Debaryomyces hansenii] Length = 406 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 53/351 (15%), Positives = 106/351 (30%), Gaps = 68/351 (19%) Query: 16 CTASVAQKVRLVSWNI---NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + S QK+ ++S+N+ + + + L + + + + L+ + + DI+ Q Sbjct: 61 PSTSKKQKISVMSFNLLSRHYMWKPVFGYLEQEYLSWSDYRFPLINLMIRQFNCDIMCFQ 120 Query: 73 EMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKKNVRVLQQSY 128 EM +K FP + FY + + + +I I V VL Sbjct: 121 EMEHLIYEKFWSKGFPSPNYHSFYVRKSEPVYWGDRPSENIDGVGIFVNGDKFDVLDSHA 180 Query: 129 PLLGAKDSFSRAG------------NRRAVELLVEI----NGKKIWVLDIHLKSFCFLDS 172 G R V LLV++ NGK ++V + HL + Sbjct: 181 IHFGEYIMQHHVKFNVTKATVERVIPRNTVALLVKLRDKQNGKILYVTNTHLYWSPKFND 240 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY--------------- 217 ++ + L D+I ++ GDFN + Sbjct: 241 VKIIQTKLL------LNVLHDFIDHNCLCDPCIIMCGDFNSNPSSKVFQLLNTGTIDAFK 294 Query: 218 ----------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-----------IP 256 N + + + + +++ N R K Sbjct: 295 CNEFALHDYDHKANSELFHNGHIENPFHLACAYESLLTHSHINPRKKLEFTSFTKGLIDV 354 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDD---IKSRGKRLSDHCPISIDYDF 304 +D+ +N +K + Y + + SDH P+ + + Sbjct: 355 VDHIWYSKNHFKVTKLLGEVDQSYYTETGVVGFPNSQFPSDHIPLVTELAY 405 >gi|255013539|ref|ZP_05285665.1| exodeoxyribonuclease [Bacteroides sp. 2_1_7] Length = 253 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 30/303 (9%), Positives = 83/303 (27%), Gaps = 77/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++++N N L G L ++ D++ +QE + A Sbjct: 1 MKIITYNTNGLRAAVGKGLP---------------EWLAQEQPDVLCIQETKLQPDQFPA 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F + + + + + + +A+ K + G Sbjct: 46 ETFEALGYKSYLFSAQKKGY----------SGVAILTKQEP----DHVEYGMGIERYDNE 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + + V+ ++ S D ++ + + ++ + ++S Sbjct: 92 GRF-----IRADFGDLSVVSVYHPSGTSGDERQD-------FKMVWLEDFQKYVVELQKS 139 Query: 202 LVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ GD+N + + + + + Sbjct: 140 RPNLILCGDYNICHEPIDIHDPIRNAKNSGFLPEEREWMTRFLSAGFIDTFRLLNPEKQE 199 Query: 246 NANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + R IDY ++ + + + SDHCP Sbjct: 200 YTWWSYRFNSRAKNKGWRIDYCMVSEAMKSRVKAAYILNDAVH-----------SDHCPA 248 Query: 299 SID 301 ++ Sbjct: 249 VLE 251 >gi|237744646|ref|ZP_04575127.1| dnase I homologous protein dhp2 precursor [Fusobacterium sp. 7_1] gi|229431875|gb|EEO42087.1| dnase I homologous protein dhp2 precursor [Fusobacterium sp. 7_1] Length = 278 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 97/306 (31%), Gaps = 37/306 (12%) Query: 1 MIRKYVLALVFFLVPCTA--SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 M + +L+++F L + S+A + + S+NI L D Sbjct: 1 MKKGKLLSIIFALFFSLSILSLADEAYIASFNILRLGA-------------AKKDMVQTA 47 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVR 117 + + DIV L E+ + + V ++ + + I+ S+ + A + Sbjct: 48 KILEGF--DIVGLVEVINRDGVEELVDELNKQSDEKWDYHISPFGVGSSKYKEYFAYVYK 105 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 K V+ ++ K S R +I + +H Sbjct: 106 KDKVKFIKSEGFYKNGKSSL----LREPYGATFQIGNFDFTFVLVHTIYG--------NN 153 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + + + ++ + E +IAGDFN + +K D I Sbjct: 154 ESQRKAENYKMVDVYNYFQDRDEKENDILIAGDFNL-YALDESFRPLYKHADKITYAIDS 212 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + N D F Q + S + ++ D+ K + +SDH P Sbjct: 213 AIKTTIGVKGRANSY-----DNFFFSQKYSQEFTGSS-GALDFSGDNPKLMREIVSDHIP 266 Query: 298 ISIDYD 303 + I + Sbjct: 267 VFIVVE 272 >gi|225558980|gb|EEH07263.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Ajellomyces capsulatus G186AR] Length = 675 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 40/358 (11%), Positives = 89/358 (24%), Gaps = 75/358 (20%) Query: 22 QKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +K +S+N + + + L+ K +ADIV LQE+ + Sbjct: 290 EKFTALSYNTLCDRSATHQQHGYAPSRALAWEYRRDLILNEIKGYNADIVCLQEIDQGSY 349 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL--- 131 + + + ++ + K + + + Sbjct: 350 HGFFREQLAYNDYKGVYWPKGRAQGMPEEEAKVVDGCATFFKGSKYILLEKNMIHFGQTA 409 Query: 132 -------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 G D ++R + + ++ ++G+++ V+++HL ++ + Sbjct: 410 VRRPDAKGQDDIYNRLWQKDNIAVVTYLENRLSGERLIVVNVHLYWDPAYKDVKLIQAAI 469 Query: 181 CSLLSQQAQWLKDWITQKKESLV---------------------------------PFVI 207 Q I + P +I Sbjct: 470 LMEEVTQLAEKYSKIPACTDKTAFRFSEPEHSTDGGGTATPVEPAPSVEYSSGSQIPLII 529 Query: 208 AGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NA 247 GDFN ++ + + F + Sbjct: 530 CGDFNSYPGSAVHELMSRGRLIEDHPDLEKRLYGNLSRVGMSYPFNLKSAYGAIGELDFT 589 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISIDYDF 304 N IDY NA + + Y + SDH + ++ F Sbjct: 590 NYTPDFADVIDYIWYTSNALQVTGLLGAVDKEYLQRVPGFPNYHFPSDHLALMAEFSF 647 >gi|171060370|ref|YP_001792719.1| endonuclease/exonuclease/phosphatase [Leptothrix cholodnii SP-6] gi|170777815|gb|ACB35954.1| Endonuclease/exonuclease/phosphatase [Leptothrix cholodnii SP-6] Length = 358 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 91/312 (29%), Gaps = 58/312 (18%) Query: 6 VLALVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 ++A+ + +R++++NI + E Y L+ + Sbjct: 85 LIAIPVMGLAHGTPQTGSGHLRVMTYNIKSYRADEKPGG-----------YALIAEEVLR 133 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 + D++ +Q+ P+ +F + +A ++ Sbjct: 134 HNPDVIVMQDANRLTDGHAPMPEAMKRVF---------APHQVYMRGQYVVA--SRHPLR 182 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL--------DSLEN 175 + PL A+ + V V + + + ++ +H S + Sbjct: 183 GCRVNPLPEAEHNARY------VRCTVRVGTQAVDLVTVHFISPRDGLNAARHERLDGVD 236 Query: 176 TYSPSCSLLSQQAQWLKDWITQKK-----ESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 + + ++ +QA+ L +T+ P ++AGD N + + Sbjct: 237 EWKQNFAVRLKQARQLVRDLTETPLLDSRGMAQPLIVAGDLNAPESSPVVQSLLALGLRD 296 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 S + N+ + ID+ ++ + G Sbjct: 297 AWSSAAIGYGYTHGHSLRPNIDL-LRIDHILVSPQVG--------------VERTFVGGT 341 Query: 291 RLSDHCPISIDY 302 S+H P+ D Sbjct: 342 EGSEHRPVITDL 353 >gi|223647224|gb|ACN10370.1| Deoxyribonuclease gamma precursor [Salmo salar] gi|223673101|gb|ACN12732.1| Deoxyribonuclease gamma precursor [Salmo salar] Length = 316 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 86/303 (28%), Gaps = 34/303 (11%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 +L LV PC++ ++ ++N+ ++ L + Sbjct: 7 LLLLLVGIFGPCSS-----FKICAFNVQNF---------DDAKSANFRVIHTLTRIVSRC 52 Query: 65 DADIVFLQEMGSYNA---VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 DI LQE+ A V N + ++ R + R + V Sbjct: 53 --DICLLQEVKDTQGNATKALVEALNRYDAYHYKSVASGVLGRTPQDQEQYVYLYRNETV 110 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + Q Y + K+ + A +R + + I + D+++ Sbjct: 111 ELTDQ-YQYVDRKEGNAAAFSRDPFVVRFQAKETVIGDFALIPLHTMASDAIKEIDKLYD 169 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + +W + + G FN ++ D + ++ Sbjct: 170 VFEEIKMKW----------NTEAVMFLGAFNAGCGHMTRQDKANIRLFSIPGFFWLIRDX 219 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPIS 299 + I V + K + S + S+ + L SDH PI Sbjct: 220 VDTTVGDTASCAYDRI--VVHGERFLKAIKPYSAQVFNIANEYKLSKERVLEVSDHFPIE 277 Query: 300 IDY 302 ++ Sbjct: 278 VEL 280 >gi|261362103|gb|ACX71485.1| sphingomyelinase [Bacillus mycoides] Length = 244 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 81/214 (37%), Gaps = 21/214 (9%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +++++ N+ LS L+ N + +D Y K + D+V L E+ NA Sbjct: 33 QNNTLKVMTHNVYMLSTN----LYPNWGQNERADLIGAADYMK--NQDVVILNEVFDNNA 86 Query: 80 VAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 ++ T E S+ +A+ K V + Y + Sbjct: 87 SNRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKIQY-V 145 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 N+ V V+ N + + V+ HL++ D++ SP+ S+ ++Q Q Sbjct: 146 FEKGCGPDNLSNKGFVYTKVKKNDRFVHVIGTHLQA---EDNMCGQTSPA-SVRTKQLQE 201 Query: 191 LKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDD 223 ++++I + + +I GD N NN D Sbjct: 202 IQEFIKNKNIPNNEYVLIGGDMNVNKINAENNSD 235 >gi|225077483|ref|ZP_03720682.1| hypothetical protein NEIFLAOT_02546 [Neisseria flavescens NRL30031/H210] gi|224951194|gb|EEG32403.1| hypothetical protein NEIFLAOT_02546 [Neisseria flavescens NRL30031/H210] Length = 259 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 33/307 (10%), Positives = 78/307 (25%), Gaps = 78/307 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81 ++++S N+N + + +Y DIV +QE+ + A Sbjct: 2 LKIISANVNGIRSAYKKGFY---------------EYIAASGVDIVCVQELKAQEADLSD 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + ++ +S + +G Sbjct: 47 DMKNPHGMHGYWHCAEKRGYSGVAVYSKRKPDNV--------------QIGMGIEEFDRE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R V + K+ V+ ++L S + + + + + K Sbjct: 93 GRF-----VRCDFGKLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNE 140 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCN 246 V+ GD+N + + + + Sbjct: 141 GRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVP 200 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY ++ + + ++ SDH P Sbjct: 201 GYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAP 249 Query: 298 ISIDYDF 304 + ++YD+ Sbjct: 250 LVVEYDY 256 >gi|223938378|ref|ZP_03630272.1| Endonuclease/exonuclease/phosphatase [bacterium Ellin514] gi|223892947|gb|EEF59414.1| Endonuclease/exonuclease/phosphatase [bacterium Ellin514] Length = 254 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 35/284 (12%), Positives = 82/284 (28%), Gaps = 37/284 (13%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 +S+N+ +++ K++ D++ QE Sbjct: 1 MSFNLRY--------ADLKKPHAWPDRRPAMQECIKSVSPDVMGTQEGLYGQIKDIASDL 52 Query: 87 NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146 + R + + P + ++ R Sbjct: 53 PDYDWIGLG-RNGGSRSEFMAVFYRKSRLEPMEYDHFWLSDTPDVIGSSTWGNKNRRMVT 111 Query: 147 ELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + + GK+ + + H F ++ S L+ Q+ + L ++ +P Sbjct: 112 WVRFKDRQTGKEFYFFNTH-----FDHEVQKAREKSAELVRQRIEGL--------KTELP 158 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD---SRCNANKNLRNKI-PIDYF 260 ++ GDFN + D+ + P+ + + ID+ Sbjct: 159 VILGGDFNGGAGTNAAYKILMEGDFLKDTWVTAPQHRGNVVGTFHGYHKAVPNGPRIDWI 218 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + E+ I +++ G+ SDH PI+ +F Sbjct: 219 LTRGP----VTAEAAEVITFSKS-----GEMPSDHFPIATWLEF 253 >gi|306836965|ref|ZP_07469915.1| exodeoxyribonuclease III [Corynebacterium accolens ATCC 49726] gi|304567148|gb|EFM42763.1| exodeoxyribonuclease III [Corynebacterium accolens ATCC 49726] Length = 269 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 30/296 (10%), Positives = 75/296 (25%), Gaps = 51/296 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ +WNIN + D D++ LQE + Sbjct: 1 MRITTWNIN----------------SVRTRAQRALDLLHTHDIDVLCLQETKVKDDKFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F + + + +A+ K + + Sbjct: 45 EAFEDAGYHV------------TCHGLNQWNGVAIISKEQPEEVFTGFPHQPGFAKDPEK 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC-------SLLSQQAQWLKDW 194 + + + + + +++ + + Y + Q++ L Sbjct: 93 PQDREARALGARIRGVEIWSLYIPNGREITDRHYDYKLDFLYQLSRYAAGHAQSKLLLTG 152 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--- 251 F K + ++ ++ + + + + Sbjct: 153 DFNIAPRDEDVWDIEAFRGKTHVTEPERAAFQMLEEAGLEEVTRRFTEDQRYTYFDYKGM 212 Query: 252 ----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ID+ + K D + G++ SDHCP+ D+D Sbjct: 213 RFHKNEGMRIDFQLASPPLAK-------HVTGARVDMEERAGEKTSDHCPLHADFD 261 >gi|301311968|ref|ZP_07217890.1| Ser/Thr protein phosphatase family protein [Bacteroides sp. 20_3] gi|300830070|gb|EFK60718.1| Ser/Thr protein phosphatase family protein [Bacteroides sp. 20_3] Length = 644 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 48/311 (15%), Positives = 86/311 (27%), Gaps = 67/311 (21%) Query: 1 MIRKYVLALVFFLVPCTASVAQ----------KVRLVSWNINTLSEQEGVSLWKNSVKRT 50 M R V A ++ AQ +R++S+N+ + V Sbjct: 24 MKRSVVFAACLWVSCLFTLSAQKTTIESKEENSLRVMSYNVRNCRGMDEV---------- 73 Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 DY + +D D++ +QE+ S + + + + Sbjct: 74 -VDYQRVADIMNRVDPDVIAVQELDSASVRSNGVFALKELADRTRMYY-TYGPSIDYQGG 131 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 I + K + PL G R R + K+ + H Sbjct: 132 KYGIGILSKEKPLSYWMLPLPG------REERRLLLVAEF----KEYVMCCSHFSL---- 177 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 Q + + K+ P +AGD N N K + Sbjct: 178 ------------TKEDQVLSVPIILDALKDIRKPLFLAGDMNSIQGSPTQNALQEKFMPL 225 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 N+ N ID+ N ++ + ++LY+E Sbjct: 226 NNYKD----------NTIPGQSPNRCIDFIYGFDNGNQYSVLR--RQVLYDEPI------ 267 Query: 291 RLSDHCPISID 301 SDH P+ +D Sbjct: 268 -ASDHLPLFVD 277 >gi|256831938|ref|YP_003160665.1| exodeoxyribonuclease III Xth [Jonesia denitrificans DSM 20603] gi|256685469|gb|ACV08362.1| exodeoxyribonuclease III Xth [Jonesia denitrificans DSM 20603] Length = 287 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 77/304 (25%), Gaps = 64/304 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + + N+N L + + DI+ +QE+ + + + Sbjct: 18 LTIATVNVNGLRAAWRKGMP---------------AWIDAAQPDIILMQEVRAPDDIVHG 62 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F N W + + +A+ ++ + + + G R Sbjct: 63 FFSNGWSLVQQAC----------DIKGRAGVAIATRHDIIAARIGLGPQQPEIPVDTG-R 111 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +G+ + V+ ++ S + + ++ + L Sbjct: 112 WVEADIALEHGRTLTVVSAYIHSGTAGTPKMDEKYSYLNRVTTRLAELN-------TPDS 164 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 ++AGD N + + + Sbjct: 165 LALVAGDINIAHTNNDIKNWRGNKKSAGFLPEERAYLDQWFDAGWHDTHRDLVGEQEGPY 224 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY + + D S R SDH P+ Sbjct: 225 TWWSNRGQAFDNDSGWRIDYHLTTPELFT-------HASYPRVDRAPSYDTRWSDHAPLV 277 Query: 300 IDYD 303 IDY Sbjct: 278 IDYS 281 >gi|255019624|ref|ZP_05291704.1| Endonuclease/exonuclease/phosphatase [Acidithiobacillus caldus ATCC 51756] gi|254970927|gb|EET28409.1| Endonuclease/exonuclease/phosphatase [Acidithiobacillus caldus ATCC 51756] Length = 269 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 36/302 (11%), Positives = 82/302 (27%), Gaps = 60/302 (19%) Query: 13 LVPCTASVAQKVRLVSWNI---------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 + T Q+ ++S NI L L + + + + Sbjct: 1 MPSPTEGHCQEFTVLSHNIQVGIGSRRSRHLVLHGWKYLLPHRHSLG--NLERIGMALRE 58 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVR 122 ADIV L E + + ++ + + + RD + + + Sbjct: 59 --ADIVGLNEADAGSYRSQYVNQAAYLANKAGFPFWAQSRTRDWGELAQHSNGLLSRWPI 116 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 V L G R +E +++ G + V+ HL Sbjct: 117 VAVHRRVLPG------WMHGRGLLEATIDLAGHPLSVVVTHLALSRHG------------ 158 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 +Q + L +++ ++ + V+ GD N + ++ + Sbjct: 159 -RFRQVEALAEYLVGRQAT----VVMGDLNCGARSPEL---------RLLLRLTGLRQAE 204 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + D+ + + D + + LSDH + Sbjct: 205 PPLATFPSWAPRFSFDHILCSPDL--------------EFLDWQRSTEPLSDHLAVLARL 250 Query: 303 DF 304 + Sbjct: 251 RW 252 >gi|104779394|ref|YP_605892.1| DNAse I-like hydrolase [Pseudomonas entomophila L48] gi|95108381|emb|CAK13075.1| putative DNAse I-like hydrolase [Pseudomonas entomophila L48] Length = 284 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 36/292 (12%), Positives = 81/292 (27%), Gaps = 58/292 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 ++RL+S+NI E + + + + + D D+V L Sbjct: 28 PEDGRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHAGRSGNLQKIGDLLS--DFDLVAL 85 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE + + + R+ + V + + +PL Sbjct: 86 QEADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRNLGRFAQHSNGVLSRLKPQQLEDHPL 145 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G R A+ + + V+ +HL ++Q + Sbjct: 146 PGPAG-------RGAILVRFGEGEDALIVVMMHLALG-------------AKTRARQLAY 185 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 +++ I V+ GD N + + L + Sbjct: 186 IRELIGGY----RHQVLMGDMNTHATD----------LLDHSPLRDLGLIAPQVEATFPS 231 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + +D+ ++ + ++ I SDH P++++ Sbjct: 232 WRPQRCLDHILLSPSLTLERVEVLAQPI--------------SDHLPVAVEI 269 >gi|317181208|dbj|BAJ58994.1| exodeoxyribonuclease [Helicobacter pylori F32] Length = 250 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++DAD+ +QE + + + Sbjct: 1 MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + + D R Sbjct: 42 QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINMEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + ++++++ + S + + + L+ Sbjct: 91 -----VVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFRKFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFSELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|307195360|gb|EFN77278.1| 2',5'-phosphodiesterase 12 [Harpegnathos saltator] Length = 565 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 38/323 (11%), Positives = 80/323 (24%), Gaps = 38/323 (11%) Query: 20 VAQKVRLVSWNINTLSEQEG-------VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + R++S+NI + + L+ + ++DI+ LQ Sbjct: 241 SGKSFRIMSYNILADAYTDSVYSKDVLFPYCPEYALDIDYRKLLILKEIVGFNSDIICLQ 300 Query: 73 EMGSYNAVAKVFP---KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR---VLQQ 126 E+ + P + Y T+ +I+ N + + V V Sbjct: 301 EVDRKIYEQDLLPSLSMLYYDGIYVTKNVISEGLAMFFNHERFDMLNVESKVISHDVDSP 360 Query: 127 SYPLLGAKDSFSRAGNRR------AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + + +K R R + + +L + F + Sbjct: 361 KFKEVWSKIENDRVKERFLNRNTTVQVMSLRSKENPSKILVVGNTHLYFRPGACHIRLLQ 420 Query: 181 CSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLGNN------------DDFWKT 227 + I ++ V +++GDFN D Sbjct: 421 GYYAITYINEVAKAIREENPGCDVSVLLSGDFNSVPERGVYRLFTENYIPENCEDWRSNA 480 Query: 228 IDPNDSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYN 281 + ++ + + N +DY + S+ Sbjct: 481 EEEVANVSLTQDLRMSSACGTPEYTNYTPNFSACLDYIFYERDKFEVEQVIPMPSKEEIT 540 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 SDH + D F Sbjct: 541 LHTGLPSIVFPSDHISLCADLKF 563 >gi|290559315|gb|EFD92650.1| exodeoxyribonuclease III [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 251 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 87/304 (28%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++SWN+N L ++ +++ ++ + +QE + + + Sbjct: 1 MKIMSWNVNGL--------------KSVIRKNEIQKELESDIYGAILIQETKTNEIIDTL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 K+ + + S ++ ++ + KN + + G K+ R Sbjct: 47 -GKDYFKYYIS----------ATSKKGYSGVMTFSKNKPLNV----IYGIKNEQFDREGR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + K ++++ + + S + + + Q L+ Sbjct: 92 -----TLTLEFKDYFLINAYFPNSRRDLSRLDYKIKFNKSILKFMQALRR--------KK 138 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249 P +I GDFN N + + I + + Sbjct: 139 PVIIGGDFNVAHNEIDIARPKSNQGNAGFTSVERKFIDEMIKKGYIDTFRIFNKENGNYT 198 Query: 250 NLRN----------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDY + K + + K SDH P+ Sbjct: 199 WWTYLYKSARTNNIGWRIDYLFVSNELKKRVKDAGII-----------KNKIGSDHAPVY 247 Query: 300 IDYD 303 I+ + Sbjct: 248 IELN 251 >gi|262196690|ref|YP_003267899.1| endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM 14365] gi|262080037|gb|ACY16006.1| Endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM 14365] Length = 285 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 30/302 (9%), Positives = 71/302 (23%), Gaps = 53/302 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA---- 79 +R+V+ N+ + + L + + L D+V LQE+ Sbjct: 1 MRVVTLNLW------------GTTPPLATRLALAAEQLRALAVDVVALQEVRHAGDGRTT 48 Query: 80 ----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + ++ + +A+ ++ ++ L A+ Sbjct: 49 AAHLAEALGFQHHYAAAVRWTAEDWPEDVPGAGAGEEGLAILSRHGLAECRALALPEARP 108 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + R + ++ + WV HL +Q + + Sbjct: 109 T----EARILLSAAIDAPAGRCWVHTTHLHY----------ALDDGLARERQVLAIDHAL 154 Query: 196 TQKKESL--VPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 ++ GDFN + + + + Sbjct: 155 RACAAEEPAAVHILCGDFNAEPDSDEMRFLRGLCTLAGRRSYFQDAFAHRHPGEDGVTWC 214 Query: 252 RNKI------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DY + + +S SDH + Sbjct: 215 TERGAARARRSMDRDRRLDYIYVSKRQRD---GRGTVREARVVLGGRSGEVAASDHYGVL 271 Query: 300 ID 301 D Sbjct: 272 AD 273 >gi|255580696|ref|XP_002531170.1| carbon catabolite repressor protein, putative [Ricinus communis] gi|223529240|gb|EEF31213.1| carbon catabolite repressor protein, putative [Ricinus communis] Length = 603 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 43/348 (12%), Positives = 86/348 (24%), Gaps = 64/348 (18%) Query: 19 SVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 S + ++S+NI + + E S + L + ADIV LQE+ + Sbjct: 248 SSSGTFTVLSYNILSDVYATSETYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQN 307 Query: 77 ---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL--- 130 A K+ + Y + +S D R + V + Sbjct: 308 DHYEEFFAPELDKHGYQALYKRKTNEVYSGNSPTIDGCATFFRRDRFSHVKKYEVEFNKA 367 Query: 131 -LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT------------Y 177 ++ + R+ + + + V+ S D+ + Sbjct: 368 AQSLTEAVVPSAQRKTALNRLVKDNVALIVVLEAKFSNQGADNPGKRQLLCVANTHVNIH 427 Query: 178 SPSCSLLSQQAQWLKDWITQKKES-LVPFVIAGDFNRKINYLGN---------------- 220 + Q L + + S +P ++ GDFN + Sbjct: 428 HDLKDVKLWQVLTLLKGLEKIAASADIPMLVCGDFNSMPGSAPHSLLAMGKVDPLHPDLV 487 Query: 221 -------------------------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + R + N Sbjct: 488 IDPLGILRPHSKLTHQLPLVSAYSSFARLGVGLGLEQQRRRMDPATNEPLFTNCTRDFIG 547 Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +DY + + E E +D + SDH + ++ Sbjct: 548 TLDYIFYTADSLTVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 595 >gi|154175230|ref|YP_001407411.1| exodeoxyribonuclease III [Campylobacter curvus 525.92] gi|112802161|gb|EAT99505.1| exodeoxyribonuclease III [Campylobacter curvus 525.92] Length = 252 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 83/304 (27%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + L D + LQE+ A Sbjct: 1 MKLISWNVNGLRAVAAKDGF---------------AWVSGLKPDFLGLQEIKVKEA---D 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P + + ++ + + + ++ + K Q+S + Sbjct: 43 VPSEIYKLGFNEISVNSAVRA-----GYSGVMSLSKFNTATQKSLFFNDDEGR------- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++E + + +I+ + D+ + +I + Sbjct: 91 -----VLEHRFGNVALFNIYFPNGQKDDAR-------LAYKMDFYAKFLAYIDALVAQGL 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + GD N L + + + + F + +A Sbjct: 139 DVIFCGDVNTAHREIDLKNPKANAKTSGFLPIERAWLDEVVAHGFIDTFRQAHGDVADAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + Q+ L + SDHCP+ Sbjct: 199 SWWSYRFNARAKNVGWRIDYFFISQSLKNRLKDAFILD-----------NIGGSDHCPVG 247 Query: 300 IDYD 303 I+ + Sbjct: 248 IEIE 251 >gi|437053|gb|AAA03710.1| DNaseI precursor [Mus musculus] Length = 284 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 34/289 (11%), Positives = 85/289 (29%), Gaps = 34/289 (11%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +R+ ++NI T E + + + + DI +QE+ + V Sbjct: 20 AGTLRIAAFNIRTFGETKMSNATLSVY---------FVKILSRY--DIAVIQEVRDSHLV 68 Query: 81 A--KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 A K+ + + +++ + R V +L G + + Sbjct: 69 AVGKLLDELNRDKPDTYRYVVSEPLGRKSYKEQYLFVYRPDQVSILDSYQYDDGCEPCGN 128 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD-WITQ 197 +R + ++ I + + + L D ++ Sbjct: 129 DTFSREPAIVKFFSPYTEVQEFAIVPLH------------AAPTEAVSEIDALYDVYLDV 176 Query: 198 KKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 ++ + GDFN +Y+ ++ + + + + + Sbjct: 177 WQKWGLEDIMFMGDFNAGCSYVTSSQWSSIRLRTSPIFQWLIPDSADTTVTSTHCAY--- 233 Query: 257 IDYF-VMDQNAYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302 D V+ ++ S + + S + +SDH P+ + Sbjct: 234 -DRIVVVRALLQAAVVPNSAVPFDFQAEYGLSNQLAEAISDHYPVEVTL 281 >gi|201066143|gb|ACH92481.1| FI09011p [Drosophila melanogaster] Length = 603 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 38/336 (11%), Positives = 85/336 (25%), Gaps = 46/336 (13%) Query: 14 VPCTASVAQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 + S + ++R+VS+N+ + S + L ++ Sbjct: 266 TTNSLSESNEIRVVSYNLLADLYASSDYAGSTLFSYCPAKYLQIDYRKPLFINEIIGYNS 325 Query: 67 DIVFLQEMGSY---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 DI+ LQE+ + ++ + + ++ + ++ + + Sbjct: 326 DILCLQEVDQRIFDFDLKEILEQPPYNYHGIMAPKGKCAEGVAIFFRNSRFDLLDSQILH 385 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELL-------------VEINGKKIWVLDIHLKSFCFL 170 L + P L +S A + I G +VL + + Sbjct: 386 LGSNIPALPVFESLWNKIKVNAQLAERICERSTTLQTCLLRIKGTDNYVLVANTHLYFHP 445 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQK---KESLVPFVIAGDFNRKINYLGNNDDFWKT 227 D+ + Q + I + + GDFN G + Sbjct: 446 DADHIRLLQMGFSMLFVEQSISKAIKDFNISSHKNIGLIFCGDFNSVP-ECGIYKLMTEQ 504 Query: 228 IDPNDSLIRFPKE------------------KDSRCNANKNLRNKIPIDYFVMDQNAYKF 269 + + + +DY + ++ Sbjct: 505 LAEKTLEDWQSNAEQAVSNVELAQPFKMASAYGAPEYTHYTTLFAGCLDYVFYQNDRFEV 564 Query: 270 LIQESF-SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 L +E + SDH + D F Sbjct: 565 LKVVPLPTEEELKANTAIPSAVFPSDHVALVADLKF 600 >gi|307826200|ref|ZP_07656410.1| Endonuclease/exonuclease/phosphatase [Methylobacter tundripaludum SV96] gi|307732734|gb|EFO03601.1| Endonuclease/exonuclease/phosphatase [Methylobacter tundripaludum SV96] Length = 284 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 84/307 (27%), Gaps = 52/307 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 Q +R++++NI+ +R DAD++FLQEM + Sbjct: 4 QGLRVLTYNIHKGFNVGNRRFV----------LHQIRDALIAADADLMFLQEMQGEHLRH 53 Query: 82 KV------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY---PLLG 132 + + + + K N H A+ K+ ++ P Sbjct: 54 EKKIADWPVLSQLEFLAENIWPYHAYGKNAIYNAGHHGNAILSKHPFERWENINVSPFPW 113 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCS--------- 182 A S R G + + + + + S S Sbjct: 114 ASRSLLHGVIRLPRMAAETAPGSPRHSLPPWKSEVSQAVGNRCDRLSGSSQDVHIVCIHF 173 Query: 183 -----LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 Q L I P +IAGDFN + + + L Sbjct: 174 GLTGKERRLQISKLCARIDSHVPHDAPLIIAGDFNDWLGQAD------RLFHDHLGLQEV 227 Query: 238 PKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 +E R + +P+D L S + + + LSDH Sbjct: 228 FRETHGRYARSFPAWMPFLPMDRIYYRG-----LTPVSCERLSH------APWHVLSDHA 276 Query: 297 PISIDYD 303 P++ + Sbjct: 277 PLTASFT 283 >gi|301307682|ref|ZP_07213639.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] gi|300834356|gb|EFK64969.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] Length = 325 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 44/334 (13%), Positives = 81/334 (24%), Gaps = 45/334 (13%) Query: 1 MIR-KYVLALVFFLVPCTASV------AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD 53 M R K++ L + + +RL+ WNI + Sbjct: 1 MNRNKFLKTLSAVCISTLLISCGQKKEQKPLRLLYWNIQNGMWCG-----------QDDN 49 Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 Y + K D DI E S P ++ F + + Sbjct: 50 YEKFTTWVKQQDPDICVWCEAQSIYKNGTADPLDSQERFLVDNWGVLAKRYGHPYWYIGG 109 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAG----NRRAVELLVEINGK-----KIWVLDIHL 164 R +V+ YP+ K A + ++ K + Sbjct: 110 H--RDNYPQVITSKYPIENIKKIIGEEPNQVVTHGAGWAKIIVDEKVLNIVTLHTWPQQW 167 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRK-------- 214 + + +++ + +++ GDFN + Sbjct: 168 AFRTEDQEASKAENGGDKYRRMEIEYICKHTIGTSTNATNEYWMMMGDFNSRNRTDNAIY 227 Query: 215 -INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273 I + +K + IDY Q + + Sbjct: 228 RYPEDSPKFLTQDYIAQETPYVDVIAKKYPNEFKTTT-GKEARIDYVYCTQPLFDIIQYA 286 Query: 274 SFSEILYNEDDIKSRG----KRLSDHCPISIDYD 303 Y + + SDH PI ID+D Sbjct: 287 DVITDEYTKPVRDPKELSNFWWPSDHRPIIIDFD 320 >gi|229592863|ref|YP_002874982.1| putative endonuclease [Pseudomonas fluorescens SBW25] gi|229364729|emb|CAY52702.1| putative endonuclease [Pseudomonas fluorescens SBW25] Length = 259 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 88/298 (29%), Gaps = 53/298 (17%) Query: 13 LVPCTASVA-QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 VP T SVA + +++ NI+ LR+ +++ AD+VFL Sbjct: 7 WVPVTPSVAISRFTVLTVNIHKGFTALNRRF----------ILPELREAVRSVGADMVFL 56 Query: 72 QEM-----GSYNAVAKVFPKNTWCIFY-STERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 QE+ + + S + + A+ K V Sbjct: 57 QEIHGTHERHPQRFSDWPNMPQYEFLADSIWPQFAYGRNAVYPHGDHGNALLSKFQIV-- 114 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 S S NR + ++ + G V I + Sbjct: 115 ---HYDNLDISQSGHENRGLLHCVLRLPGTGQEVHAICIHLGLR-----------EVHRQ 160 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 QQ + L+ I++ + P V+AGDFN + + F + Sbjct: 161 QQLRLLEQRISE-IPAGAPLVVAGDFNDWRQKAD--------LSQSGLREVFIETHGKLP 211 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +P+D + + + + LSDH P+S++ + Sbjct: 212 RTFPARLPLLPLDRIYVRN-----VKVHNPRVLT------SRPWSHLSDHVPLSVEIE 258 >gi|294142433|ref|YP_003558411.1| extracellular nuclease [Shewanella violacea DSS12] gi|293328902|dbj|BAJ03633.1| extracellular nuclease [Shewanella violacea DSS12] Length = 883 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 44/379 (11%), Positives = 100/379 (26%), Gaps = 96/379 (25%) Query: 22 QKVRLVSWNINTLSEQE---GVSLWKNSVKRTTSD------------------YTLLRQY 60 +R+ S+N+ L + G +L + + +D T + Sbjct: 466 GDIRVASFNVLNLFTSDSSVGGALNVSCRDQDDADASRGCGRGAHSLDEYLLQRTKIVNA 525 Query: 61 AKNLDADIVFLQEMGSY-----NAVAKVFPKNTWCIFYSTER--LINHSKRDSNND-IHT 112 K ++ADI+ L E+ + +++ + + + + D I Sbjct: 526 IKEMNADILGLMEIENNGFGATSSIQYLVNALNAELPAADAYAFIATADSEFIGTDAITV 585 Query: 113 AIAVRKKNVR------------------VLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 I R V+ V + + R ++ +NG Sbjct: 586 GIIYRPGKVKPSGDAFIIATPEQHAPAGVATREDSDKVSLSPAYDKYQRHSLGQGFAVNG 645 Query: 155 KKIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES-- 201 +K+ ++ HLKS + + L + + + Sbjct: 646 EKLTIVVNHLKSKGSSCLEDWTEFAEKSDPADLQGHCNEFRVSAVKVLGESLKDVEGDLL 705 Query: 202 ----------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFP 238 P + DF+ + W T+D + Sbjct: 706 IIGDLNAYGLEDPLRVLTDFDAATSDRDIVGASWTTLDGKVYEQTGGVIDKGFGYINLNT 765 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR---------- 288 + + +D+ + + + + +I I E ++ Sbjct: 766 QVHGVDTYSYSYGGELGNLDHALGNASLAQRVIDIQDWHINSVESNLFQYPGKYSGDLAK 825 Query: 289 ---GKRLSDHCPISIDYDF 304 R SDH P+ + + Sbjct: 826 SENAFRSSDHDPVIVALSY 844 >gi|262376870|ref|ZP_06070097.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] gi|262308215|gb|EEY89351.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] Length = 812 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 44/325 (13%), Positives = 93/325 (28%), Gaps = 50/325 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY----TLLRQYAKNLDADIVFLQEMGSY 77 +++R ++N+ + +++ + K +DAD+ L E+ + Sbjct: 454 KQIRAAAFNVLNYDNGSEKGFPTERGASSETEFKKQHQKIVSALKTIDADVYGLMEIANN 513 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 K + + + ++ A+A+ + RV P + Sbjct: 514 GFDDKSAVAYLSQALGADWKYVIPTQMTKLGTDAIAVAIIYNSKRVKPVGEPAVYD---D 570 Query: 138 SRAGNRRAVELLVE--INGKKIWVLDIHLKS-FCFLDSLENTYSP-------SCSLLSQQ 187 NR + + GK ++ HLKS + + Sbjct: 571 QTEKNRVTMAQSFQSVNGGKIFTIVPNHLKSKGSCPTDKTLADADQGDGQGCWNATRLTA 630 Query: 188 AQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 Q L WI + + +++ GD N D N ++ ++ Sbjct: 631 VQELMQWIAKNPTQVAKPNYLLVGDMN----SYAKEDPILALEKANYKVLLNDEKIGQGK 686 Query: 246 NANKN----------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK----- 290 A +D+ + D + Y + + I +E + Sbjct: 687 TAYSYVFGVASDANGNGGAGNLDHAIADADLYPMVKRAFAWHINADEPTALDYNEEYKTD 746 Query: 291 ------------RLSDHCPISIDYD 303 R SDH P+ +D D Sbjct: 747 EQIAAFYSDDAFRSSDHDPVIVDMD 771 >gi|261362093|gb|ACX71479.1| sphingomyelinase [Bacillus mycoides] Length = 239 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 81/214 (37%), Gaps = 21/214 (9%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +++++ N+ LS L+ N + +D Y K + D+V L E+ NA Sbjct: 33 QNNTLKVMTHNVYMLSTN----LYPNWGQNERADLIGAADYMK--NQDVVILNEVFDNNA 86 Query: 80 VAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 ++ T E S+ +A+ K + + Y + Sbjct: 87 SNRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGNYSSSTPEDGGVAIVSKWPIIEKIQY-V 145 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 N+ V V+ N + + V+ HL++ D++ SP+ S+ ++Q Q Sbjct: 146 FEKGCGPDNLSNKGFVYTKVKKNDRFVHVIGTHLQA---EDNMCGQTSPA-SVRTKQLQE 201 Query: 191 LKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDD 223 ++++I + + +I GD N NN D Sbjct: 202 IQEFIKNKNIPNNEYVLIGGDMNVNKINAENNSD 235 >gi|254776497|ref|ZP_05218013.1| endonuclease/exonuclease/phosphatase [Mycobacterium avium subsp. avium ATCC 25291] Length = 254 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 71/306 (23%), Gaps = 82/306 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78 +R+ ++NI + LR + LD D++ LQE+ Sbjct: 1 MRVATFNILHGRTVGDGVI-----------VERLRDCIRRLDPDVLSLQEVDCDQPRSEH 49 Query: 79 -----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-----TAIAVRKKNVRVLQQSY 128 A A+ + + + D IA+ + Q Sbjct: 50 ADLTGAAAEAMGAVEHRFVAAISGTPGATWMAATGDEQPGTAAYGIALLSRYPVASWQVL 109 Query: 129 PLLGAKDSFS------------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 L F R AV + ++ V + HL + Sbjct: 110 RLPRIPMRFPMYLPGPNRVMIVDEEPRAAVIAQLGTPIGELTVANTHLSFVPGWNR---- 165 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + L+ I + P ++ GD N + Sbjct: 166 ------------RQLRRLIRDLRGLPGPRLLTGDLNMTPQTVRRWSGMRAL--------- 204 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 +D+ + + + +SDH Sbjct: 205 ------GNAKTFPADNPNRQLDHIL-TDDRRLRCAAVQADLMP------------ISDHR 245 Query: 297 PISIDY 302 P+ +D Sbjct: 246 PLVVDL 251 >gi|297694584|ref|XP_002824554.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 1 [Pongo abelii] gi|297694586|ref|XP_002824555.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 2 [Pongo abelii] gi|146286035|sp|A2T7I6|APEX1_PONPY RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName: Full=APEX nuclease; Short=APEN; AltName: Full=Apurinic-apyrimidinic endonuclease 1; Short=AP endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox factor-1; Contains: RecName: Full=DNA-(apurinic or apyrimidinic site) lyase, mitochondrial gi|124054149|gb|ABM89264.1| APEX1 [Pongo pygmaeus] Length = 318 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +++ SWN++ L + K DI+ LQE Sbjct: 53 TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K+ + S + S+ + ++ + + + + G Sbjct: 98 KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R V ++ ++ + + + L Sbjct: 148 EEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRRFLKGLA-- 200 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ + L Sbjct: 255 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLTALCDSKIRSKAL--------- 305 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 306 --GSDHCPITL 314 >gi|72161438|ref|YP_289095.1| hypothetical protein Tfu_1034 [Thermobifida fusca YX] gi|71915170|gb|AAZ55072.1| conserved hypothetical protein [Thermobifida fusca YX] Length = 232 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 39/282 (13%), Positives = 75/282 (26%), Gaps = 57/282 (20%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +R++S+NI +L + D + + ++ D+V LQE A Sbjct: 2 AAVLRVLSYNIRSLRD----------------DPLAVARVIRSCRPDVVCLQE-----AP 40 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + L R L + + R Sbjct: 41 RHLLWQTKRRWLARRCGLRLAVGRRPGGLEILT-------APTLAVDHCSHRLLHRYPRL 93 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R L+ ++I V HL A L ++ + Sbjct: 94 HQRALAIALIRRGRRRIAVAVSHLDL-------------QARARYAHAAQLLAFLGMQPA 140 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 P V+A D N + + W+ + + + + + R + ID Sbjct: 141 ---PAVLAVDVNERPDGP-----AWQMLATH-LVDAGAHGPEGGEPTFPSWRPRSRIDTI 191 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D+ + SDH P+ + Sbjct: 192 FVDRRLTVRAAGIPA-------APARRDLVAASDHLPVLAEI 226 >gi|157828881|ref|YP_001495123.1| exodeoxyribonuclease III [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933608|ref|YP_001650397.1| exodeoxyribonuclease III [Rickettsia rickettsii str. Iowa] gi|157801362|gb|ABV76615.1| exodeoxyribonuclease III [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908695|gb|ABY72991.1| exodeoxyribonuclease III [Rickettsia rickettsii str. Iowa] Length = 260 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 88/303 (29%), Gaps = 69/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + LLR + + DI+ LQE+ A Sbjct: 1 MKIATWNIN----------------SIKTRLNLLRNFLSKENPDILLLQEIKCETA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ + +A+ K + +++ R Sbjct: 41 ------KFPFDALSDLPYNSYVHGQKSYNGVAIISKFPV----DEIIKDFPNNYCSDQAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E+ + + ++ ++ + F+ S + + ++++ KK Sbjct: 91 F-LEIKLSLPIGFCNIISLYAPNGSFVGSDKFVAKLAF------YDNFINYLSTKKSFDE 143 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GDFN + +TI + + S+ Sbjct: 144 KTIIGGDFNIAPFDIDVYSPKLLAETTCFTEVEQKKLRTILNSGFEDLYRLMHPSKQE-F 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID + N +L D ++ SDH P+ Sbjct: 203 SWWDYRARCFEQNKGMRIDMILGCNNTIDYLENCYM-------DYNLRTQEKPSDHIPVI 255 Query: 300 IDY 302 + Sbjct: 256 ASF 258 >gi|261393405|emb|CAX51041.1| putative exodeoxyribonuclease [Neisseria meningitidis 8013] Length = 259 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S N+N + + +Y ADIV +QE+ + A Sbjct: 2 LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 KN + ++ +AV K +G R Sbjct: 47 DMKNPHGMHGHWHCAEKRG--------YSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + ++ V+ ++L S + + + + + K Sbjct: 95 F-----VRCDFDRLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNEGR 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248 V+ GD+N + + + + Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGY 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY ++ + + ++ SDH P+ Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 251 Query: 300 IDYDF 304 ++YD+ Sbjct: 252 VEYDY 256 >gi|295115708|emb|CBL36555.1| Metal-dependent hydrolase [butyrate-producing bacterium SM4/1] Length = 324 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 35/318 (11%), Positives = 77/318 (24%), Gaps = 61/318 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L++ N ++L E++ + + D++ LQE+ + Sbjct: 1 MKLLTLNTHSLEEKD-----------YEKKLKIFTEEILKEKPDVIALQEVNQPLDGEEA 49 Query: 84 FPKNTWCIFYSTER-------------------------------LINHSKRDSNNDIHT 112 + + S + Sbjct: 50 DGEVLKKSGFIPCPSEPPSCAVPVRLGNHGLRAAQLLRRSGFLVFWTWTSAKVGYGKYDE 109 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 +A+ + L +D + R+A+ + + I + V + + D Sbjct: 110 GMALMSRRPIAEVSQLFLTDGRDYNNWK-TRKALAITLNIGKGEEPVSFVTAHMGWWKDE 168 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 E Q + L + + GDFN + + G D D Sbjct: 169 EEPFSR--------QWERLDAF-ASSLRRRADVWLMGDFNTQDSVRGEGYDRITASGWKD 219 Query: 233 SLIRFPKEKDSRCNANKNLRNKI-------PIDYFVMD--QNAYKFLIQESFSEILYNED 283 + K + IDY ++ + Sbjct: 220 AYRAAGKRDGGITIPGAIDGWREDGEVPGMRIDYIWYGRKHDSGDRKSRGDVLIEEVRTV 279 Query: 284 DIKSRGKRLSDHCPISID 301 S +SDH + + Sbjct: 280 FNGSDCPVVSDHFGVLAE 297 >gi|224023542|ref|ZP_03641908.1| hypothetical protein BACCOPRO_00244 [Bacteroides coprophilus DSM 18228] gi|224016764|gb|EEF74776.1| hypothetical protein BACCOPRO_00244 [Bacteroides coprophilus DSM 18228] Length = 356 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 86/310 (27%), Gaps = 76/310 (24%) Query: 19 SVAQKV-RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-GS 76 + +L+++N+ + + + Y + +ADI+ LQE+ S Sbjct: 95 PQGGTLVKLLTYNVMNTNLSRPEEGAEEG---------NIVTYLEQSEADIICLQEITSS 145 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + K FP + R +A K + + A + Sbjct: 146 EKQLRKAFPMYPY-------------VRRIGFATANGVACLSKYPILSAKRIEYASAFN- 191 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL----------------------- 173 + ++I + +++ HL+S Sbjct: 192 -------GSALFRLKIGKDTVTLINNHLESNKLDAGDKALYKELLKSPDEEKVKTSGKYL 244 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + + + ++ + QA + I + ++ GDFN + + Sbjct: 245 WHKLADAVAIRAAQADSVAKVIAEYGYD--RMLVCGDFNDSPLSYA-RRVIARGLQDA-- 299 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + N+NL ID+ + + R R S Sbjct: 300 --YVERGNGPGFSYNQNLLY-FRIDHILAGTDFRIL-------------HCEVDRSIRTS 343 Query: 294 DHCPISIDYD 303 DH P+ + Sbjct: 344 DHYPVWCLLE 353 >gi|182411832|ref|YP_001816898.1| endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] gi|177839046|gb|ACB73298.1| Endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] Length = 499 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 50/374 (13%), Positives = 106/374 (28%), Gaps = 76/374 (20%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSL------WKNSVKRTTSDY 54 M + + ++ FF + A+ +V +N+ L + +G + + + + Sbjct: 1 MQIRKLGSIAFFSALALTAAARPFTVVVYNVENLVDADGQARFEEYQAPRYTPAHVLTKV 60 Query: 55 TLLRQYAKNLD----ADIVFLQEMGSYNAVAKV------------------FPKNTWCIF 92 + D D+V LQE+ A + Sbjct: 61 QAVASVLARFDDGRGPDVVMLQEIEVDETPAAAALDYEAMLRRYADRKIEDMLGRGFDQE 120 Query: 93 YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN---------- 142 + + + T V PL + +R Sbjct: 121 IADLPAEALLAKALADRGLTGYHVIVAENVRSGGDRPLSQKCVTLTRFPVKAVRSHPTVD 180 Query: 143 -RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R +E+LVEI+G +++ + H KS + E T + + L Q+ + ++ Sbjct: 181 ARAILEVLVEIDGATLYLFNNHWKSGAGDAATEPTRAANARTLRQRLDEILR-----QDP 235 Query: 202 LVPFVIAGDFNRKINYLGNN----------------DDFWKTIDPNDSLIRFPKEKDSRC 245 VI GDFN + N ++ D + + + Sbjct: 236 QADIVIGGDFNSQYNQKRRYPQMTVTGMNDVLGSQGNELAIRGQQRDLYNLWFELPAEQR 295 Query: 246 NANKNLRNKIPIDYFVMDQNAYK----FLIQESFSEILYNEDDI------------KSRG 289 ++ + ++ + Y + SF ++ + G Sbjct: 296 GSDTFQGEWGTLIQMLITRGLYDYRGVQYVDNSFGVAKFDGLNADEKGTPIRWSGEGPAG 355 Query: 290 KRLSDHCPISIDYD 303 SDH P+ + Sbjct: 356 SGFSDHFPVFARFT 369 >gi|41351032|gb|AAH65655.1| Zgc:77395 [Danio rerio] Length = 550 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 32/316 (10%), Positives = 87/316 (27%), Gaps = 41/316 (12%) Query: 9 LVFFLVPCTASVAQK------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 LV + PC A VR+ +WN+ + ++ Sbjct: 225 LVTSVRPCVEPPAGTRDGKPVVRVATWNLQ---------RCSSEKANNPGVKEVVCMTLL 275 Query: 63 NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN------------HSKRDSNNDI 110 D ++ +Q++ A+ K + S R + + ++ Sbjct: 276 ENDIKLLAVQDLADREALDKFCAELNQPTLCSVRRWKSARGLWKCAVSEKPNGVSNSAPE 335 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 + + ++ S L + + + + I ++ ++++ L + Sbjct: 336 FSGFLWDCFSGIEMKDSAVLESFTTNGNGNPHPQPYLGHFYIGSSELTLVNVLLTAAPSP 395 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 + + + L + + + ++ G F + + + Sbjct: 396 TENKRKSTSDDLKTHK----LGSGVQETLKGERDLLVLGHFGVAPDSSEMEILRKEKLSA 451 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI-QESFSEILYNEDDIKSRG 289 + F + + + +D ++ K Q S I Sbjct: 452 LLAPSVFTNI------STRTPQGSRSLDNIWASRSLRKTYTGQCSVVREGLTNPWIPDNW 505 Query: 290 KR---LSDHCPISIDY 302 S+HCP+ ++ Sbjct: 506 SWGGVASEHCPVVAEF 521 >gi|45659020|ref|YP_003106.1| hemolysin/sphingomyelinase-like [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45602266|gb|AAS71743.1| hemolysin/sphingomyelinase-like [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 558 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 33/298 (11%), Positives = 85/298 (28%), Gaps = 30/298 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + ++S+N+ S+++ + LL + + D++ L + NA Sbjct: 79 DLNILSYNLFLYSKEDIYFGY----WEEEKRAELLGKSKFTKNQDVIVLSRVFDTNARNT 134 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHT-------AIAVRKKNVRVLQQSYPLLGAKD 135 + T+ + + + K + Y Sbjct: 135 LLDNLNLEYPDQTDVIGKTKYGWDQTLGDFRQQINNGGVVILSKWPIQEKIQYIFKNHGC 194 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 N+ + ++ + I ++ +S S + Q +K +I Sbjct: 195 GNDTFYNKGFAYVKIKKGSQIIHIVGTDTQSEDSTCSDLG-----VNARINQLTEIKKFI 249 Query: 196 T-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-------- 246 ++ + +IAG N + + ++ N+ Sbjct: 250 DSKRISNKEIVLIAGALNVDKSNQSEYKNMLNILEVNEPNYAGIPFTWDTKKNKIAAYNN 309 Query: 247 -ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----KRLSDHCPIS 299 + +Y ++ +N ++ I ++ + + K + SDH PI Sbjct: 310 IYYSWNQTSNYGEYILVSKNHFQLPIWQNLAYDPISPTTWKRKNGYTSYEFSDHFPIY 367 >gi|308183626|ref|YP_003927753.1| exodeoxyribonuclease III [Helicobacter pylori PeCan4] gi|308062786|gb|ADO04674.1| exodeoxyribonuclease III [Helicobacter pylori Cuz20] gi|308065811|gb|ADO07703.1| exodeoxyribonuclease III [Helicobacter pylori PeCan4] Length = 250 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++DADI +QE + + + Sbjct: 1 MKLISWNVNGLRACMTKGFM---------------DFFNSVDADIFCIQE----SKMQQD 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + + D R Sbjct: 42 QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINIEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + +++++++ + S + + + L+ Sbjct: 91 -----VVTCEFESFYLVNVYVPNSQQALSRLSYRMSWEVEFRKFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|288556715|ref|YP_003428650.1| exodeoxyribonuclease [Bacillus pseudofirmus OF4] gi|288547875|gb|ADC51758.1| exodeoxyribonuclease [Bacillus pseudofirmus OF4] Length = 251 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 79/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + +ADI LQE Sbjct: 1 MKLISWNVNGLRACVKKGF---------------LDFFHEQNADIFCLQETKLQEG-QIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + F++ +S I+VR + + R Sbjct: 45 LELDGYHQFWNYALKKGYSGTAVFTKQK-PISVRYGVGELESED-------------EGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++++++ + S L + L Sbjct: 91 I-----ITLEFDSFYLVNVYTINAKRDLSRLPERLEWEDALKEYLLDLDRH--------K 137 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V GD N + T+ + + F R +A Sbjct: 138 PVVYCGDLNVAHAEVDLKNARSNHGNSGFTLEERGKMTTLLESGFIDSFRYLYPERTDAF 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ + + + S + SDHCPI Sbjct: 198 TWWSYMRDVRARNIGWRIDYFIVSTQLKEKINEASIYAEVL-----------GSDHCPIG 246 Query: 300 IDYD 303 ++ D Sbjct: 247 LELD 250 >gi|219116713|ref|XP_002179151.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217409042|gb|EEC48974.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 765 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 35/365 (9%), Positives = 88/365 (24%), Gaps = 79/365 (21%) Query: 15 PCTASVAQKVRLVSWNI---NTLSE--------QEGVSLWKNSVKRTTSDYTLLRQYAKN 63 + +R++++N+ + V + L+ Sbjct: 396 SSGEASDAPLRIMTYNVLADQNAFDFGVSGKVAHSYAEYLTPQVLKRERRLPLILHEILA 455 Query: 64 LDADIVFLQEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI------ 114 AD+V LQE+ + F++++ + + + T Sbjct: 456 HQADVVCLQEVDEYVYETLFKSALRYAGYDGFFTSKENEGSREGCATFWLTTRFDPVPES 515 Query: 115 -----AVRKKNVRVLQQSYPLLGAKDS-----FSRAGNRRAVELLVEINGKKIWVLDIHL 164 +R + A + R R V + G + ++ + + Sbjct: 516 NKKSHLIRDMFPFESKTDDQEWTALNDIAGLLGKRRDLRYIVAAKL---GHILHLVPLQV 572 Query: 165 KSF----CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLG 219 K ++ + + + Q + +++ + V+ GD N + Sbjct: 573 KGDTKTIWVANTHLFYHPDASHIRLMQMYLICRELSESLKTKDGGIVLCGDMNSSLTNSP 632 Query: 220 NNDDFWKTI------------------------DPNDSLIRFPKEKDSRCNA-------- 247 + + PN FP Sbjct: 633 GKLLIDRIVPKNFRNLRTDLNGFRWSRQWRQPDSPNAFDDDFPSLSLPDSFPILRSALSE 692 Query: 248 ---NKNL------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + +D+ ++ + S D + SDH + Sbjct: 693 TPAFTHFIGGLERGFRGTLDHILVSPDLIPLKSGPMPSMRDVTRDTAMPSERIPSDHVSL 752 Query: 299 SIDYD 303 + D Sbjct: 753 ICEVD 757 >gi|71043968|ref|NP_080465.3| endonuclease/exonuclease/phosphatase family domain-containing protein 1 [Mus musculus] gi|123783293|sp|Q3TGW2|EEPD1_MOUSE RecName: Full=Endonuclease/exonuclease/phosphatase family domain-containing protein 1 gi|74214399|dbj|BAE40436.1| unnamed protein product [Mus musculus] gi|148693355|gb|EDL25302.1| RIKEN cDNA 2310005P05 [Mus musculus] Length = 569 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 36/296 (12%), Positives = 81/296 (27%), Gaps = 35/296 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 RL +WN+ S V N R TLL K ++ +QE+ A+ K Sbjct: 261 FRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDKEALEKF 311 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDI------------HTAIAVRKK-NVRVLQQSYPL 130 + I + + + ++ NV + Sbjct: 312 CTELNQPILPNIRKWKGSRGCWRSIVAEKPSNQLQKGPCYSGFLWDTAANVELRDIPGRE 371 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + ++A ++ + ++++ L + + ++ + S Sbjct: 372 SSPSNGHAKAVGPSPFLARFKVGSNDLTLVNLQLTALALPGAENSSKNHSDGHR---LLN 428 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + + + VI GDF + + + + P + + Sbjct: 429 FALTLQETLKGEKDVVILGDFGQGPDSNDYD-----ILRREKFHHLVPAHTFTNISTRNP 483 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302 +K D + ++ K I S+HCP+ + Sbjct: 484 QGSKSV-DNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEL 538 >gi|12843816|dbj|BAB26125.1| unnamed protein product [Mus musculus] Length = 569 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 36/296 (12%), Positives = 81/296 (27%), Gaps = 35/296 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 RL +WN+ S V N R TLL K ++ +QE+ A+ K Sbjct: 261 FRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDKEALEKF 311 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDI------------HTAIAVRKK-NVRVLQQSYPL 130 + I + + + ++ NV + Sbjct: 312 CTELNQPILPNIRKWKGSRGCWRSIVAEKPSNQLQKGPCYSGFLWDTAANVELRDIPGRE 371 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + ++A ++ + ++++ L + + ++ + S Sbjct: 372 SSPSNGHAKAVGPSPFLARFKVGSNDLTLVNLQLTALALPGAENSSKNHSDGHR---LLN 428 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + + + VI GDF + + + + P + + Sbjct: 429 FALTLQETLKGEKDVVILGDFGQGPDSNDYD-----ILRREKFHHLVPAHTFTNISTRNP 483 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302 +K D + ++ K I S+HCP+ + Sbjct: 484 QGSKSV-DNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEL 538 >gi|32266427|ref|NP_860459.1| exodeoxyribonuclease LexA [Helicobacter hepaticus ATCC 51449] gi|32262477|gb|AAP77525.1| exodeoxyribonuclease LexA [Helicobacter hepaticus ATCC 51449] Length = 252 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 32/303 (10%), Positives = 77/303 (25%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++ADI +QE Sbjct: 1 MKLISWNVNGLRACMNKGFM---------------DFFNEVNADIFCIQESKMCKE-QAQ 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + ++++ + + + + K + ++ R Sbjct: 45 FHFENYKEYWNSAEKKGY----------SGVVILSKTQPINVA----YDMGITYHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++++++ + + + L+ + Sbjct: 91 I-----ITAEYPHFYLVNVYTPNSKRELERLDYRMKWEDDFRAFVKNLE--------NHK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GD N + + + F + A Sbjct: 138 SVIICGDLNVAHQEIDLKNPKTNRRNAGFTDEERNKMSALLDAGFIDTFRYFYPTLTGAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ Q+ L + ++ SDHCP+ Sbjct: 198 SWWSYMGKARENNTGWRIDYFLCSQSLTPSLKDANIYPHIF-----------GSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|50511063|dbj|BAD32517.1| mKIAA1706 protein [Mus musculus] Length = 607 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 36/296 (12%), Positives = 81/296 (27%), Gaps = 35/296 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 RL +WN+ S V N R TLL K ++ +QE+ A+ K Sbjct: 299 FRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDKEALEKF 349 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDI------------HTAIAVRKK-NVRVLQQSYPL 130 + I + + + ++ NV + Sbjct: 350 CTELNQPILPNIRKWKGSRGCWRSIVAEKPSNQLQKGPCYSGFLWDTAANVELRDIPGRE 409 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + ++A ++ + ++++ L + + ++ + S Sbjct: 410 SSPSNGHAKAVGPSPFLARFKVGSNDLTLVNLQLTALALPGAENSSKNHSDGHR---LLN 466 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + + + VI GDF + + + + P + + Sbjct: 467 FALTLQETLKGEKDVVILGDFGQGPDSNDYD-----ILRREKFHHLVPAHTFTNISTRNP 521 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302 +K D + ++ K I S+HCP+ + Sbjct: 522 QGSKSV-DNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEL 576 >gi|331092367|ref|ZP_08341193.1| exodeoxyribonuclease [Lachnospiraceae bacterium 2_1_46FAA] gi|330401391|gb|EGG80977.1| exodeoxyribonuclease [Lachnospiraceae bacterium 2_1_46FAA] Length = 250 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 74/305 (24%), Gaps = 82/305 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + + DADI +QE Sbjct: 1 MKLISWNVNGIRACVQKGF---------------LDFFHQADADIFCIQESKMQEG-QLQ 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S Sbjct: 45 LELEGYHQYWNYAEKKGYSGTAVFTKE-----------------------------EPLS 75 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--S 201 + +E + K+ ++ + F F + L + QW D++ K+ Sbjct: 76 VTYGMGIEEHDKEGRLITLEFPEFYFATVYTPNSQNELARLDYRMQWETDFLAYMKKLEE 135 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P + GD N + + + F Sbjct: 136 KKPVIFCGDLNVAHREIDLKNPKTNRKNAGFTDEERGKFGELLDAGFIDTFRYFYPDMEG 195 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDYF + ++ + L ++ SDHCP Sbjct: 196 IYSWWSYRFRAREKNAGWRIDYFCVSESLRERLADAKILTYIF-----------GSDHCP 244 Query: 298 ISIDY 302 + +D Sbjct: 245 VELDL 249 >gi|311032922|ref|ZP_07711012.1| exodeoxyribonuclease III [Bacillus sp. m3-13] Length = 254 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 70/304 (23%), Gaps = 75/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N + Y ++DADI +QE Sbjct: 1 MKLVSWNVNGIRACVKKGFM---------------DYFNDMDADIFCIQETKLQEG-QID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S + LQ Y L K R Sbjct: 45 LDTPGYYQYWNYAIKKGYSGTAVFTKMKP-----------LQVRYGLDEKKAEECEPEGR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + ++++++ + + + L Sbjct: 94 I-----LTLEYEDFFLVNVYTPNSQRDLARLPFRLDWEDRFLAYIKMLDQ--------QK 140 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N + F + Sbjct: 141 SVIVCGDLNVAHAEIDLKNPKSNRNNSGFTEEERGKMTRLLGEGFSDTFRHFYPELTDKY 200 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ N L SDHCP+ Sbjct: 201 TWWSYMNKVRERNIGWRIDYFIVSDNLKGSLKDAEIH-----------SDIMGSDHCPVV 249 Query: 300 IDYD 303 + + Sbjct: 250 LILN 253 >gi|261840198|gb|ACX99963.1| exodeoxyribonuclease [Helicobacter pylori 52] Length = 250 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 82/303 (27%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++DAD+ +QE + Sbjct: 1 MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE-SKMQQEQNI 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + F++ + ++ + K + + D R Sbjct: 45 FEFKGYFDFWN----------CAIKKGYSGVVTFTKKEPLSVSYGINIDEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + ++++++ + S + + + L+ Sbjct: 91 -----VVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFRKFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKDIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|170758666|ref|YP_001787187.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A3 str. Loch Maree] gi|169405655|gb|ACA54066.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A3 str. Loch Maree] Length = 352 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 101/311 (32%), Gaps = 44/311 (14%) Query: 22 QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +V++NI G +S ++T + + + K ++ +FLQE Sbjct: 53 DSFSIVTFNIGYGGMDDKQDFFMDGGKGSRSSSKEKTMENMRGITSFLKKDNSSFIFLQE 112 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV------LQQS 127 + + + + F + + ++ + + S + + + K + V L + Sbjct: 113 VDTNS--TRSFRIDQYDYLKNSLKAYSSSMALNYKTPWVPVPILKPHGTVNAGLVNLSKY 170 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 + + + ++ + V + K ++S + Y + QQ Sbjct: 171 KINSATRYQYPGKESWPRQLAELDRCFLESRVSLENGKELVLINSHLSAYDKGGKIRKQQ 230 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---------NDDFWKTIDP--NDSLIR 236 +LK++I ++ + ++ GD+N I D K + + Sbjct: 231 LSFLKNYIIKEYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKW 290 Query: 237 FPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID F++ N ++ Y+ + + Sbjct: 291 VADKDVPTTRTDARPYKKGENFTAVIDGFLVSDNIEATSVKA------YSMEFKNT---- 340 Query: 292 LSDHCPISIDY 302 DH P+ +++ Sbjct: 341 --DHNPVKMEF 349 >gi|210622632|ref|ZP_03293292.1| hypothetical protein CLOHIR_01240 [Clostridium hiranonis DSM 13275] gi|210154133|gb|EEA85139.1| hypothetical protein CLOHIR_01240 [Clostridium hiranonis DSM 13275] Length = 250 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 78/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + +DADI LQE + Sbjct: 1 MKFISWNVNGLRACVTKGFM---------------DFFNEVDADIFCLQETKLQEGQIDL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ + +++ ++ ++ A+ K + + D R Sbjct: 46 NPE-GYESYWN----------YADKKGYSGTAIFTKKKPLSVAYGIGIDEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + + + ++ + + L +S Sbjct: 91 -----VITLEFEDFYFVTVYTPNSQTELKRLEYRMRWEDDFRAYLKNL--------DSKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + + + F Sbjct: 138 PVVMCGDLNVAHKEIDLKNPKTNRKNAGFTDEERNKFTEFLESGFIDTFRYFYPDAEGMY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF ++ L+ + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFCTSESMKDRLVSAKIHNEVL-----------GSDHCPVE 246 Query: 300 IDYD 303 + + Sbjct: 247 LVIE 250 >gi|189485031|ref|YP_001955972.1| exodeoxyribonuclease III [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170286990|dbj|BAG13511.1| exodeoxyribonuclease III [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 251 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 88/304 (28%), Gaps = 81/304 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81 +++VSWN+N D+T + K+ +ADIV +QE + Sbjct: 1 MKIVSWNVN------------GIRAIYKKDFTA---WFKDENADIVCVQETKAGETQFPK 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + N + + S+ +S + I + ++ Sbjct: 46 DIKEINGYNFYCSSAEKKGYSGVAVWSKIKPDFVIAS--------------IENKVFDNE 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + ++ K + +++ + + +L ++ Q K+ Sbjct: 92 GRI-----IRLDFKDFIIFNVYFPNG-------GASQERLKYKMEFYDYLIKYLKQFKDK 139 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 +I GD+N + + + + + F N Sbjct: 140 T--VIICGDYNTAHFSIDLARPKENEKVSGFMPEEREKLDNLVSSGFIDTFRYFNKEPGN 197 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 K ID+F M Q++ K L + SDHCP Sbjct: 198 -YTWWDYKTAARSRNIGWRIDHFFMSQHSVKRLKSADIK-----------KSVSGSDHCP 245 Query: 298 ISID 301 +SI Sbjct: 246 VSIT 249 >gi|34581351|ref|ZP_00142831.1| exodeoxyribonuclease III [Rickettsia sibirica 246] gi|28262736|gb|EAA26240.1| exodeoxyribonuclease III [Rickettsia sibirica 246] Length = 260 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 88/303 (29%), Gaps = 69/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + LLR + + DI+ LQE+ A Sbjct: 1 MKIATWNIN----------------SIKTRLNLLRNFLSKENPDILLLQEIKCETA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ + +A+ K + +++ R Sbjct: 41 ------KFPFDALSDLPYNSYVHGQKSYNGVAIISKFP----ADEIIKDFPNNYCSDQAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E+ + + ++ ++ + F+ S + + ++++ KK Sbjct: 91 F-LEIKLSLPIGFCNIISLYAPNGSFVGSDKFVAKLAF------YDNFINYLSTKKSFDE 143 Query: 204 PFVIAGDFNRKINYLGNNDDFW---------------KTIDPNDSLIRFPKEKDSRCNAN 248 +I GDFN + +TI + + S+ Sbjct: 144 KTIIGGDFNIAPFDIDVYSPKLLAETTCFTEVEQKKLRTILNSGFEDLYRLMHPSKQE-F 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID + N +L D ++ SDH P+ Sbjct: 203 SWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYM-------DYNLRAQEKPSDHIPVI 255 Query: 300 IDY 302 + Sbjct: 256 ASF 258 >gi|326480264|gb|EGE04274.1| endonuclease/exonuclease/phosphatase [Trichophyton equinum CBS 127.97] Length = 292 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 39/294 (13%), Positives = 77/294 (26%), Gaps = 24/294 (8%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD-IVFLQEMGSYNAVAK 82 R+++ NI + R L Y L+ + V LQE Sbjct: 8 FRILTHNIRYATTSPSAGEQP-WSVRAPHIVNEL-DYHSRLNPESFVCLQEALHNQVTDV 65 Query: 83 VFPK---------NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + W + + S A+ ++ V P + + Sbjct: 66 LAGLNSRPHAAETDQWAYYGVGRDDGKQAGEYSPIFYRPAVWTLQEKETVWLSETPSVPS 125 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 K + A R + I VL ++ D + S L+ ++ Sbjct: 126 K-GWDAASIRIVTIGVFNHKSSNITVLAMNTHL---DDQGSKSRFESAKLI---LSLIQK 178 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP----KEKDSRCNANK 249 ++ + + +AGDFN + + D+ + P + Sbjct: 179 YLARY-PEVKGNFLAGDFNSIESQEAYREFTKPGSSIVDTYKKVPAAQHYGDEITFTGFD 237 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY ++ + + SDH + D Sbjct: 238 GKTKGSRIDYVMVGPQSCSSASIPFTVNGYAVMPNRFDNRIYNSDHRAVVADVT 291 >gi|297671007|ref|XP_002813640.1| PREDICTED: deoxyribonuclease gamma-like isoform 2 [Pongo abelii] Length = 305 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 40/290 (13%), Positives = 92/290 (31%), Gaps = 32/290 (11%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN- 78 A +R+ S+N+ + E S + + ++ + K DI+ + E+ N Sbjct: 17 SALALRICSFNVRSFGE---------SKQEDQNAMDVIVKIIKRC--DIILVMEIKDSNN 65 Query: 79 ----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + +N+ + + R++ + + A ++K V V ++SY + Sbjct: 66 RICPILMEKLNRNSRRGITYNYVISSRLGRNTYKEQY-AFLYKEKLVSV-KRSYHYHDYQ 123 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D +R + + + I S+ L+ W Sbjct: 124 DGDEDVFSREPFVVWFQSPHTAVKDFVIIPLHTTPETSV----REIDELVEVYMDVKHRW 179 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 F+ GDFN +Y+ + + + +++ Sbjct: 180 ------KAENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAY 233 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 I + Q ++ +S S + + + + L SDH P+ Sbjct: 234 DRI--VLRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKL 281 >gi|109946643|ref|YP_663871.1| exodeoxyribonuclease III [Helicobacter acinonychis str. Sheeba] gi|109713864|emb|CAJ98872.1| exodeoxyribonuclease [Helicobacter acinonychis str. Sheeba] Length = 250 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 81/303 (26%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++DADI +QE + + + Sbjct: 1 MKLISWNVNGLRACMTKGFM---------------DFFNSVDADIFCIQE----SKMQQE 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + + D R Sbjct: 42 QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINIEEHDKEGRI--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++++I+ + S N + + L+ Sbjct: 92 ------ITCEFESFYLVNIYTPNSQQALSRLNYRMSWEVEFRRFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNELLNTGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ + L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNSLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|25029040|ref|NP_739094.1| hypothetical protein CE2484 [Corynebacterium efficiens YS-314] gi|259505969|ref|ZP_05748871.1| 5'-nucleotidase family protein [Corynebacterium efficiens YS-314] gi|23494327|dbj|BAC19294.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259166450|gb|EEW51004.1| 5'-nucleotidase family protein [Corynebacterium efficiens YS-314] Length = 850 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 40/345 (11%), Positives = 92/345 (26%), Gaps = 61/345 (17%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN---------------------SVKRTT 51 + +V + S+N+ G + S + Sbjct: 472 ALAAIDAVEGDFHIASFNVLNYFTSLGEDYDCDAYTDINGNPISARNCDVRGAYSQQAFE 531 Query: 52 SDYTLLRQYAKNLDADIVFLQEMGS-----------YNAVAKVFPKNTWCIFYSTER--L 98 + LD D++ L+E+ + A+ + + Sbjct: 532 DQQGKIVAAINRLDVDVLGLEEIENTAAVTGDVSRRDEALNALVDALNTAHGSTRWAAVE 591 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 + I A V+ + +S + + ++ + Sbjct: 592 SPLQLGTDEDVIRVAFIYDVTTVKPVGESRIFDDPAYTGTARQPLAQEFQPLDETKESFV 651 Query: 159 VLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNR 213 + H KS + + S ++ QAQ L D + + + + P I GD N Sbjct: 652 GVVNHFKSKGSPVNGDADTGDGQGHSANVRLAQAQALIDHLENQDDWADKPVFILGDLN- 710 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273 + + T+ + + + +D+ + + A ++ Sbjct: 711 ----AYSRETVLSTLAGAGYSNIAAEYDAG--YSYQFSGRIGSLDHALGNDAAMNRVVDA 764 Query: 274 SFSEILYNEDDIKSRGK---------------RLSDHCPISIDYD 303 +I +E + R SDH PI + ++ Sbjct: 765 EVWDINADESIAFEYSRRNYNTVDVFEADNVFRSSDHDPIKVGFN 809 >gi|296126298|ref|YP_003633550.1| exodeoxyribonuclease III Xth [Brachyspira murdochii DSM 12563] gi|296018114|gb|ADG71351.1| exodeoxyribonuclease III Xth [Brachyspira murdochii DSM 12563] Length = 257 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 39/301 (12%), Positives = 78/301 (25%), Gaps = 70/301 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++SWN+N + L + K + DI+ LQE A + Sbjct: 1 MKIISWNVNGIRAAYKKG---------------LVDFIKKENPDIICLQE---TKAFEEQ 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P++ I + ++ +A+ K L FS R Sbjct: 43 LPEDLRNIEGYELFINPADPEV--KKGYSGVAIYTKLKPNKVIKNKLGS---KFSDNEGR 97 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +++ + + N +++ L +S Sbjct: 98 I-----LSLEFDDFTIFNVYFPNGGKSEEHFNYKLSFYDAITKHLTKL--------KSKT 144 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNANK 249 ++ GD N + N + Sbjct: 145 NVILCGDMNIAHEAIDLARPKENEKSIGFLPEEREKITEFLNKGFTDTFRMFVKEGGHYS 204 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 K IDYF ++ + + + SDHCPI I Sbjct: 205 WWDMKTRSREKNVGWRIDYFFVNNEIAQNIKRADIMT-----------DVMGSDHCPILI 253 Query: 301 D 301 + Sbjct: 254 E 254 >gi|154151954|ref|YP_001405572.1| exodeoxyribonuclease III Xth [Candidatus Methanoregula boonei 6A8] gi|154000506|gb|ABS56929.1| exodeoxyribonuclease III Xth [Methanoregula boonei 6A8] Length = 270 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 77/305 (25%), Gaps = 78/305 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAK 82 ++SWN+N L R D + + +IV +QE + Sbjct: 3 TILSWNVNGL--------------RGCYDRKQFLPVFR-HNPEIVCVQETKAPGEKLPER 47 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 V + F+S + + + + ++ + Q G D Sbjct: 48 VRNLYGYHTFFSAVPAGSTA----------GVGLFTRHEPLSVQ----YGFGDPDFDNKG 93 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R ++ + + +L+I + +I E Sbjct: 94 R-----VLMADYGRFVLLNIAFPLGIKPMGNLDNKLRFY-------DAFLLYIRSLCEQG 141 Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 ++ GDFN + + F Sbjct: 142 RAVIVCGDFNVAHTDKDLYNPPKKPVRQVGISPDERGRIDQLIALGFTDTFRLFHAGPGY 201 Query: 247 ANKNL--------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY + Q F+ + + + SDHCP+ Sbjct: 202 YTRWPFQNNSRERNFGWRIDYCFVSQALRPFVADATILHEI-----------KGSDHCPV 250 Query: 299 SIDYD 303 +++ + Sbjct: 251 ALELN 255 >gi|332216281|ref|XP_003257277.1| PREDICTED: deoxyribonuclease gamma-like [Nomascus leucogenys] Length = 304 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 40/290 (13%), Positives = 93/290 (32%), Gaps = 32/290 (11%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN- 78 A +R+ S+N+ + E S + + ++ + K DI+ + E+ N Sbjct: 16 SALALRICSFNVRSFGE---------SKQEDQNAMDVIVKIIKRC--DIILVMEIKDSNN 64 Query: 79 ----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + +N+ + + R++ + + A ++K V V ++SY + Sbjct: 65 RICPILMEKLNRNSRRGITYNYVISSRLGRNTYKEQY-AFLYKEKLVSV-KRSYHYHDYQ 122 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D + +R + + + I S+ L+ W Sbjct: 123 DGDADVFSREPFVVWFQSPHTAVKDFVIIPLHTTPETSV----KEIDELVEVYMDVKHRW 178 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 F+ GDFN +Y+ + + + +++ Sbjct: 179 ------KAENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAY 232 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 I + Q ++ +S S + + + + L SDH P+ Sbjct: 233 DRI--VLRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKL 280 >gi|319788340|ref|YP_004147815.1| endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis 11-1] gi|317466852|gb|ADV28584.1| Endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis 11-1] Length = 276 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 43/301 (14%), Positives = 85/301 (28%), Gaps = 60/301 (19%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQYAKNLD 65 ++ A + +R++S NI S S + R + + Q A Sbjct: 18 MLEAGAPPTRLLRVLSANIQAGSSTRRYSDYVTRSWSHALPAGRKRTSLDAIAQLAAAH- 76 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 DIV LQE + + + + + + R +A + K V Sbjct: 77 -DIVGLQEADPGSLRSGFTNQTHYLAQRAGFHYWTHQPNRSVGGVASSANGLLSKLEPVR 135 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + L G R R + + + V HL Sbjct: 136 ISDHALPG------RIRGRGVLLGHFGDGREGLTVAVAHLSLG-------------AKSR 176 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 Q ++ + + + V+ GDFN + + L R + Sbjct: 177 MSQLSFIAELLQDHPNA----VLMGDFNCLPDVPEM-----------ELLYRTTSLRPPE 221 Query: 245 C--NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 C + + + ID+ ++ + K+ SDH +++D Sbjct: 222 CVVPTFPSWKPQRAIDHILVSGDLRC--------------AGAKALPAAFSDHLALAMDI 267 Query: 303 D 303 + Sbjct: 268 E 268 >gi|296209068|ref|XP_002751376.1| PREDICTED: endonuclease/exonuclease/phosphatase family domain-containing protein 1 [Callithrix jacchus] Length = 565 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 35/296 (11%), Positives = 79/296 (26%), Gaps = 39/296 (13%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+ S V N R TLL K ++ +QE+ A+ K Sbjct: 261 LRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 311 Query: 84 FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKK-NVRVLQQSYPL 130 + + + + +V + Sbjct: 312 CVELNQPTLPNIRKWKGPRGCWKAVVAEKPSSQLQKGAGYAGFLWDAAASVELRDAGSQE 371 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + + ++ + ++++HL + S ++ + Sbjct: 372 SSPSNGHGKPVGLSPYLARFKVGSHDLTLVNLHLAALTLPGSENHSD-------GHRLAS 424 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + + + +I GDF + + + + P F + KN Sbjct: 425 FAQTLQETLKGEKDVIILGDFGQGPDSNDYDILRKEKFQPLIPAHTFTNI------STKN 478 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302 + +D + ++ K I S+HCP+ + Sbjct: 479 PQGSKSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEL 534 >gi|257866617|ref|ZP_05646270.1| conserved hypothetical protein [Enterococcus casseliflavus EC30] gi|257872867|ref|ZP_05652520.1| conserved hypothetical protein [Enterococcus casseliflavus EC10] gi|257800575|gb|EEV29603.1| conserved hypothetical protein [Enterococcus casseliflavus EC30] gi|257807031|gb|EEV35853.1| conserved hypothetical protein [Enterococcus casseliflavus EC10] Length = 257 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 28/284 (9%), Positives = 69/284 (24%), Gaps = 35/284 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ ++N+ V + + + D D++ +QE + A + Sbjct: 1 MKAATYNLR-------VDTDYDQEWQWHYRSEAVCSLIDYYDWDVLAIQEAR-PSQFADL 52 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + A + L A +R Sbjct: 53 AKLTQYASVTAERDGDGLGEGIGLYYQKEAFELLASGSFWLS--LTPTEPSIHPEAAYSR 110 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V +++ ++ + + + L D I + Sbjct: 111 LCVWAVLQEKKNPPFLAITT-------HLDNISEMARFEGMKVILEQLADQIERY----- 158 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---LRNKIPIDYF 260 P ++ GD N + + + + + + IDY Sbjct: 159 PVLLMGDLNAEPTERVHRYLEQHFQNAKEHGQKPHHGPKGSYQNFIYTLPWQELEEIDYI 218 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + F+ + + SDH P+ + F Sbjct: 219 Y----------TKGFTVVKTACLTDSYDRRFPSDHFPLEAEVQF 252 >gi|210617713|ref|ZP_03291707.1| hypothetical protein CLONEX_03931 [Clostridium nexile DSM 1787] gi|210149155|gb|EEA80164.1| hypothetical protein CLONEX_03931 [Clostridium nexile DSM 1787] Length = 250 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 78/303 (25%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + ++ + DADI +QE A Sbjct: 1 MKLISWNVNGIRACVQKGF---------------LEFFQEADADIFCIQE-SKMQAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + AV K + Q + D R Sbjct: 45 LELEGYHQYWNYAEKKGY----------SGTAVFTKKEPLSVQYGIGIEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++ + + ++ + + + + + L+ Sbjct: 91 -----VITLEFEEFYFVTVYTPNSQSELARLSYRIQWETDFLAYLKGLEQ--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + AGD N + + + F Sbjct: 138 PVIFAGDLNVAYAEIDLKNPKTNRKNAGFTDEERAKFGEVLKAGFIDTFRYFYPEMEGIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + ++ L SDHCPI Sbjct: 198 SWWSYRFSARAKNAGWRIDYFCVSESLKDRLADAKILT-----------DVMGSDHCPIE 246 Query: 300 IDY 302 +D Sbjct: 247 LDL 249 >gi|56698248|ref|YP_168621.1| exodeoxyribonuclease III, putative [Ruegeria pomeroyi DSS-3] gi|56679985|gb|AAV96651.1| exodeoxyribonuclease III, putative [Ruegeria pomeroyi DSS-3] Length = 262 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 28/308 (9%), Positives = 69/308 (22%), Gaps = 75/308 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAV 80 L +WNIN ++ + DI+ LQE+ S Sbjct: 2 PFTLATWNIN----------------SVRLREPIVCKLLAEEGPDILCLQEIKSPVDKMP 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + F + + +A+ + + Sbjct: 46 VEGFADLGYRHV-----------VAHGQKGYNGVAILSRLPIEEVGREDFATLGHARH-- 92 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 V +E + + + ++ + D + + ++DW Sbjct: 93 -----VAARLENG---VTIHNFYVPAG--GDVPDREVNEKFGQKLDYLTEMRDWFHANAP 142 Query: 201 SLVPFVIAGDFNRKINYLGN--NDDFWKTID-------------PNDSLIRFPKEKDSRC 245 ++ GD N + K + + + ++ + Sbjct: 143 EKS--ILVGDLNIAPREDDVWNHKQLLKIVSHTPIEVDHLGQVMDSGKWVDITRQDIPQG 200 Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ + ++ SDH Sbjct: 201 LLYSWWSYRAKDWSAADKGRRLDHVWATPDISNAGHSS-------RILRDARGWEQPSDH 253 Query: 296 CPISIDYD 303 P+ +D Sbjct: 254 APVFASFD 261 >gi|118579337|ref|YP_900587.1| endonuclease/exonuclease/phosphatase [Pelobacter propionicus DSM 2379] gi|118502047|gb|ABK98529.1| Endonuclease/exonuclease/phosphatase [Pelobacter propionicus DSM 2379] Length = 354 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 40/295 (13%), Positives = 85/295 (28%), Gaps = 49/295 (16%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 +S A +R+++WN+ S R L+ + DIV Q + Sbjct: 98 SSTATPLRVMTWNVKYCS-------------RGKLAQQALKDDIARANPDIVLFQ--DAG 142 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + ++ + R + R + Y + Sbjct: 143 GVMQGALGSYFAKWHFHSQEQFVIASRFPLEETEILPISRPSGKQKTFARYRVKIGST-- 200 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 + E + + + K +L + + S+ QA+ ++++I+Q Sbjct: 201 ----PVSLYNIHFESPREGLSAVGSARKRPWYLPKGIQRFERNVSIRLSQARMVQEFISQ 256 Query: 198 KKESLVPFVIAGDFNRK--------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 P +I GD N + G +D F + + Sbjct: 257 ---EKGPVIIGGDLNSPDASQVCAGLRDAGLHDAFAEGGRGYGYTYGHFLLQRRLPWMRV 313 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + ID+ +M + + ++ SDH P+ D F Sbjct: 314 SW---MRIDHVMMSSH--------------FKALGCRTGTGEASDHRPVIADLLF 351 >gi|311900422|dbj|BAJ32830.1| putative exodeoxyribonuclease [Kitasatospora setae KM-6054] Length = 272 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 27/273 (9%), Positives = 69/273 (25%), Gaps = 57/273 (20%) Query: 59 QYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 ++ ++++V LQE+ + + + W ++ + +AV Sbjct: 23 EWIDATESEVVCLQEVRAETDQFADVLARLDGWHAVWAP----------AAAKGRAGVAV 72 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + + D R +++ G + V ++L S ++ Sbjct: 73 LSRRAPEATRIGFGSAEFDVSGR-------YAELDLPG--LTVASLYLPSGEVGTDRQDE 123 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGN 220 + L+ ++ GD+N Sbjct: 124 KERFMAEFLVHLGELRARA---AADGREVLVCGDWNIAHREADLRNWKANQKKAGFLPEE 180 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRC-NANKNLRNK---------IPIDYFVMDQNAYKFL 270 + +D + + + + IDY + Sbjct: 181 RAWLSRVLDEHGYVDVLRQHHADVAEGPYSWWSYRGRAFDNDAGWRIDYQMATPGLAARC 240 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +R SDH P++ +D Sbjct: 241 TAA-------RVERAATHAERWSDHAPVTAVFD 266 >gi|288803025|ref|ZP_06408461.1| exodeoxyribonuclease III [Prevotella melaninogenica D18] gi|288334542|gb|EFC72981.1| exodeoxyribonuclease III [Prevotella melaninogenica D18] Length = 249 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 82/302 (27%), Gaps = 77/302 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L G Q K+LDAD LQE A Sbjct: 1 MKFISWNVNGLRACVGKEFE---------------QQFKDLDADFFCLQETK-MQAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ ++ ++ A+ K+ + + D R Sbjct: 45 ISFLGYESYWN----------YADKKGYSGTAIFTKHKPLSVTYGINIDEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + + + ++ K + Sbjct: 91 -----VITLEMDDFYLVTVYTPN-------SQDGLRRLDYRMKWEDDFQAYL-HKLDEKK 137 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N + + + + + Sbjct: 138 PVIVCGDMNVAHQEIDLKNPKTNRKNAGFTDEEREKMTQLLSNGFIDTFRTLYPEQVTYS 197 Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + R + IDYF++ + L + SDHCP+ I Sbjct: 198 WWSYRFRAREKNTGWRIDYFLISERLKDRLEDAKIHTEI-----------MGSDHCPVEI 246 Query: 301 DY 302 Sbjct: 247 IL 248 >gi|207091978|ref|ZP_03239765.1| exodeoxyribonuclease [Helicobacter pylori HPKX_438_AG0C1] Length = 250 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 81/303 (26%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++DAD+ +QE + + + Sbjct: 1 MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + + D R Sbjct: 42 QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINMEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + ++++++ + S + + + L+ Sbjct: 91 -----VVTCEFESFYLVNVYTPNSQQALSRISYRMSWEVEFKKFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFSELLNAGFIDTFRYFYPNKERAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|186474192|ref|YP_001861534.1| endonuclease/exonuclease/phosphatase [Burkholderia phymatum STM815] gi|184196524|gb|ACC74488.1| Endonuclease/exonuclease/phosphatase [Burkholderia phymatum STM815] Length = 250 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 75/288 (26%), Gaps = 56/288 (19%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 TA+ + +R+ +WNI+ + + + + + LDADIV LQE+ Sbjct: 13 TTAAGVRALRIATWNIHGTVGTDRFASP-----------ERIGRVIRELDADIVALQEVP 61 Query: 76 -SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + P + A+ + ++ L Sbjct: 62 LGGSFAPSALPVLREMTGMDAIAGPTLDTP----ERRYGNAILSRLPICATRALDL---- 113 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 SF R A+++ VE +G + + S Q + L Sbjct: 114 -SFGTREARGALDVDVETDGPGTALRVVATHLGL-----------SARERRAQIRAL--- 158 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 I + +P ++ GD N + + Sbjct: 159 IAAFDTARMPVLLMGDINEWFVWGPALRMLVTHFR-----------AAPAPRTFPSRLPV 207 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D M +L + SDH P+ Sbjct: 208 FALDRIWM----------HPVDRLLDVHVHSSMLARVASDHLPLVARI 245 >gi|85714109|ref|ZP_01045098.1| exodeoxyribonuclease III xth [Nitrobacter sp. Nb-311A] gi|85699235|gb|EAQ37103.1| exodeoxyribonuclease III xth [Nitrobacter sp. Nb-311A] Length = 271 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 33/306 (10%), Positives = 74/306 (24%), Gaps = 64/306 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +WNIN L+ ++ K D++ LQE Sbjct: 3 LTFTTWNIN----------------SVRLRIDLVAKFLKAQRPDVLCLQETKCP---DDA 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + +AV K + + + +R Sbjct: 44 FPLKRFRQLGYDH------VALNGQKGYHGVAVVSKLP------FDASNIRTFCDKIDSR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + G ++ + D + +P + Q +K + Sbjct: 92 HVSVIFGGQAGLAAPLVLHNFYVPAGGDIPDPAMNPKFAHKLQFLDEMKACAPLHPGNGD 151 Query: 204 PFVIAGDFNRKINYLG--NNDDFWKTIDP--------------NDSLIRFPKEKDSRCNA 247 V+ GD N + ++ K + + + Sbjct: 152 RHVLVGDLNVAPHENDVWSHRQLLKIVSHTPIECEKLLGVQKHGNWVDIARARIPMSEKI 211 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + + + +R SDH P Sbjct: 212 YTWWSYRAADWIASDRGRRLDHIWVSEALRSGIRD-------FRITRDARGWQRPSDHVP 264 Query: 298 ISIDYD 303 ++ D Sbjct: 265 VTAVID 270 >gi|329120764|ref|ZP_08249426.1| exodeoxyribonuclease III [Neisseria bacilliformis ATCC BAA-1200] gi|327460561|gb|EGF06897.1| exodeoxyribonuclease III [Neisseria bacilliformis ATCC BAA-1200] Length = 258 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 80/306 (26%), Gaps = 76/306 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS N+N + Y ADIV +QE+ + A + Sbjct: 2 LKIVSANVNGIRSAYKKGF---------------LDYIAASGADIVCVQELKAQEA--DL 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ + ++ +AV K Q + D R Sbjct: 45 APEMKNPHGMYGHW------HCAEKRGYSGVAVYSKRAPDRVQVGMGVEEFDREGRF--- 95 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + + V+ ++L S + + + LK Sbjct: 96 ------VRCDFGNLSVISLYLPSGSSAEERQQAKFRFLDVFYPMLADLKA-------EGR 142 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 V+ GD+N + K I+ + Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVINDLG-WTDIWRTLYPDHPG 201 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 N+ IDY ++ + + ++ SDH P+ Sbjct: 202 YTWWSNRGQAYAKDVGWRIDYQMVTPELAAKALNAHV-----------YKDEKFSDHAPL 250 Query: 299 SIDYDF 304 ++YD+ Sbjct: 251 VVEYDY 256 >gi|300725857|ref|ZP_07059321.1| AP endonuclease domain protein [Prevotella bryantii B14] gi|299776845|gb|EFI73391.1| AP endonuclease domain protein [Prevotella bryantii B14] Length = 352 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 85/303 (28%), Gaps = 70/303 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +R++S+N+ + + QY K DI+ LQE G Sbjct: 88 GAIRVMSYNVFLFAGWNSPGTSNG-----------ILQYIKKQHPDILCLQEAGCQEIGQ 136 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 I+ +S S+N IA+ K V + Sbjct: 137 ANIDSVLDKIY----PYKQYSHHSSSNSE--TIALYSKFPIVDSVRINYPSKGN------ 184 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN------------------------TY 177 +V V I+ +W+++ HL++ Sbjct: 185 --FSVAYRVTIDEDSVWIINNHLETTGLSQDERKGFKLMMKGEMDHHVAKSTSKLIITRL 242 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 S + + +A + ++I + ++ GDFN ++ K ID + Sbjct: 243 GESSAKRAVEADAVSEFIEHHQ--HESIILCGDFNDGPISYTHHTIVKKLID------CY 294 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + + ID + + F +LSDH P Sbjct: 295 IESGFGPGISYHKGGFFVRIDNIMCTSDWEPFQCNV-------------DNKIKLSDHYP 341 Query: 298 ISI 300 IS Sbjct: 342 ISC 344 >gi|315585908|gb|ADU40289.1| exodeoxyribonuclease III [Helicobacter pylori 35A] Length = 250 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 81/303 (26%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++DAD+ +QE + + + Sbjct: 1 MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQD 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + + D R Sbjct: 42 QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINMEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + ++++++ + S + + + L+ Sbjct: 91 -----VVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFRKFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|77456279|ref|YP_345784.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens Pf0-1] gi|77380282|gb|ABA71795.1| putative endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens Pf0-1] Length = 292 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 40/292 (13%), Positives = 85/292 (29%), Gaps = 58/292 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 ++RL+S+NI E + + +S+ + D D+V L Sbjct: 28 PADSRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHPGRSSNLQKIGNLLG--DFDLVAL 85 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE + + + R+ + V + + +PL Sbjct: 86 QEADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRNLGRLAQHSNGVLSRLRPWAIEDHPL 145 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G K R A+ + + + V+ +HL + S Q + Sbjct: 146 PGPKG-------RGAILVRFGEGPEALVVVMMHLALG-------------ARVRSMQLAY 185 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 +++ I K V+ GD N + + + L + Sbjct: 186 IRELIGGYKHQ----VLMGDMNTHASD----------LLQHSPLRDLGLLAPQLEATFPS 231 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + +D+ ++ ++ I SDH P++++ Sbjct: 232 WRPQRCLDHILLSPTLTLEKVEVLAQPI--------------SDHLPVAVEI 269 >gi|308049464|ref|YP_003913030.1| endonuclease/exonuclease/phosphatase [Ferrimonas balearica DSM 9799] gi|307631654|gb|ADN75956.1| Endonuclease/exonuclease/phosphatase [Ferrimonas balearica DSM 9799] Length = 401 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 34/371 (9%), Positives = 87/371 (23%), Gaps = 82/371 (22%) Query: 14 VPCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKR------TTSDYTLLRQYAKNLD 65 +++ ++N+ + R + + + + Sbjct: 26 TSSAPFTPTTIKVATFNVSMEAGNYTPRGQQPNPDRLRELLANGDHPQIRNIAEILQRVR 85 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER---------------------------- 97 DIV L E ++ +++ Sbjct: 86 PDIVLLNEFDYIADRSRGVDAFRRHYLMVSQQGREPLDYPYAYTAPVNTGVPSPFDIDGD 145 Query: 98 -----LINHSKRDSNNDIHTAIAVRKKNVRVL----------------QQSYPLLGAKDS 136 + + V + Q Sbjct: 146 GIASGTGGDAWGYGLYPGQYGMVVLSRYPIDTEQVRQFQTFPWHRMPGAQPILNPDGTPF 205 Query: 137 FSRAGNRRAVE-------LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + A R + + +NG++I +L H F + + + + A Sbjct: 206 YDDATWRGLRLSSKSHWDVPINVNGEQIHLLAAHPTPPVFDGPEDRNGARNHDEIRLWAD 265 Query: 190 WL--KDWITQKK------ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK-- 239 +L D++ + FVI GD+N + + + + + + Sbjct: 266 YLNNADYLEDDAGQRGGLAADTRFVIVGDYNASPSEGQSRPGAINQLLNHPRVNASERPR 325 Query: 240 -------EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 D+ + +DY + ++ + F + E + Sbjct: 326 STGGELHSPDNPNGPYHTAYWRAQVDYVLPSAFGFEPVRSGVFWPVDGLELSRLIADRNA 385 Query: 293 S-DHCPISIDY 302 S DH + ++ Sbjct: 386 SSDHRLVWMEL 396 >gi|307212268|gb|EFN88076.1| Recombination repair protein 1 [Harpegnathos saltator] Length = 327 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 35/313 (11%), Positives = 81/313 (25%), Gaps = 78/313 (24%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + P +++ +WN++ + + Y DADI+ LQ Sbjct: 64 MKPNVEGKEYNLKICTWNVSGIRAVIKKNG---------------LDYIAKEDADIIALQ 108 Query: 73 EMGSYNA-VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 E + + + ++ + + +A+ K V + Sbjct: 109 ETKCGKDKMPDEIKLSGYHHYFLDSKQSGY----------CGVALFCKEKPVSVK----Y 154 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 G +S + R + + +++++++ + + + + L Sbjct: 155 GLNNSNFDSEGRI-----IAAEFPEFFMVNVYVPNAGQKLVTLPKRLEWNKIFKKYIEEL 209 Query: 192 KDWITQKKESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIR 236 P +I GD N D + Sbjct: 210 DQ--------KKPVIICGDMNVAHQEIDLKNPKTNTKNAGFTKEERDGMTDFLAAGFIDT 261 Query: 237 FPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 F + A +DYF+ + + + +Y Sbjct: 262 FRLLYPDKEGAYTFWSYFANARNKDIGWRLDYFLASERIKNKICDNIIRKQVY------- 314 Query: 288 RGKRLSDHCPISI 300 SDHCP+ + Sbjct: 315 ----GSDHCPVIL 323 >gi|227498619|ref|ZP_03928763.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226904075|gb|EEH89993.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 251 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 79/303 (26%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LV+WN+N L ++ + LDADI+ +QE Sbjct: 1 MKLVTWNVNGLRACMNKGFKES---------------MEKLDADIISIQETK-MQREQAS 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + ++++ + + A+ + + + D R Sbjct: 45 FDFPGYYEYWNSAVKKGY----------SGTAIFSRIKPLSVTYGLGIEEHDQEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ ++++++ + + + + L Sbjct: 91 -----VITAEYDDFYLVNVYTPNSQRELARLSYRMAWEDAFQAYCEDL--------SKKK 137 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N + + F R A Sbjct: 138 TTIVCGDMNVAHEPIDLKNPDSNHHNAGFSDEERQKLDAFLARGFVDSFRMLYPDREGAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ + + + + SDHCP+ Sbjct: 198 TWWSYMFKARERNAGWRIDYFLVSEAGRDKIRDVTIMNEI-----------MGSDHCPVV 246 Query: 300 IDY 302 ++Y Sbjct: 247 LEY 249 >gi|145351477|ref|XP_001420103.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580336|gb|ABO98396.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 578 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 39/353 (11%), Positives = 88/353 (24%), Gaps = 64/353 (18%) Query: 16 CTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + + + ++N+ + + + + + N +ADI+ LQE Sbjct: 209 NSTPEPRTFTVATYNVLADLYCNSDMYGYVPDWALAWAYRRQNILKEIVNYNADILCLQE 268 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL--- 130 + S + + + S + + A+ K + Sbjct: 269 VQSDHYEDFFQGEMAKYGYASVYKKKTAQVFSEGKFVIDGCAIFFKKDKFALIKKYEVEF 328 Query: 131 ----------LGAKDSFSRAGNR-----RAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 LG A NR A+ +++E +L + C ++ + Sbjct: 329 NKAALSLVESLGGATQKKDALNRLMKDNIALIVVLEALDVDQQLLQGKRQLLCVANTHIH 388 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLV-PFVIAGDFNRKINYL---------------- 218 + + Q L + + S P V+ GDFN Sbjct: 389 ANTEHNDVKLWQVHTLLKGLEKIATSAEIPMVVCGDFNSVPGSAAHSLLSNGRVPADHPE 448 Query: 219 ---GNNDDFWKTIDPNDSLIRFPKEK----------------------DSRCNANKNLRN 253 + + L N Sbjct: 449 LGIDPFGILQPSTKLSHPLPLVSAYTNLHKPCLDSEALERQRDRVDVIGEPLFTNCTKDF 508 Query: 254 KIPIDYFVMDQNAY--KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +DY ++A L++ + + + SDH + ++ + Sbjct: 509 NGALDYVFYTEDALAPVSLLELPGEREVRAKYGGLPNTQWSSDHVCLMTEFQW 561 >gi|110638457|ref|YP_678666.1| exodeoxyribonuclease III (exonuclease III) [Cytophaga hutchinsonii ATCC 33406] gi|110281138|gb|ABG59324.1| exodeoxyribonuclease III (exonuclease III) [Cytophaga hutchinsonii ATCC 33406] Length = 255 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 77/302 (25%), Gaps = 70/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N ++ +L ++ + D+V LQE Sbjct: 1 MKIATYNVNGVNG----------------RLPVLLRWLQEARPDVVCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +A+ ++ + + L G + +R Sbjct: 35 LKAPQEKFPEEAFLQAGYHAIWHGQKSWNGVAILSRSSDIRELRRVLPGDPEDNH---SR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + I + ++L + + Y + + L E+ + Sbjct: 92 YIEAFV-----NGIVIGCLYLPNGNPAPGPKFDYK------LKWFKRLTAHAADLIEADM 140 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GDFN L +K + K Sbjct: 141 PIALIGDFNVMPTDLDVYKPESWIDDALFRPEVRAAFKKLMKQGWTDAIRKLHPDEKIYT 200 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+F++ L + D ++ SDH P I Sbjct: 201 FWDYFRNAYGRNAGLRIDHFLLSPPLAAKLKKAGV-------DKHVRGWEKSSDHAPTWI 253 Query: 301 DY 302 Sbjct: 254 IL 255 >gi|325127357|gb|EGC50292.1| exodeoxyribonuclease III [Neisseria meningitidis N1568] Length = 259 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S N+N + + +Y ADIV +QE+ + A Sbjct: 2 LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 KN + ++ +AV K +G R Sbjct: 47 DMKNPHGMHGHWHCAEKRG--------YSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + ++ V+ ++L S + + + + + K Sbjct: 95 F-----VRCDFGRLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNEGR 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248 V+ GD+N + + + + Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHTLGWTDMWRTLYPDNPGY 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY ++ + + ++ SDH P+ Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAVKALSAHV-----------YKDEKFSDHAPLV 251 Query: 300 IDYDF 304 ++YD+ Sbjct: 252 VEYDY 256 >gi|320532068|ref|ZP_08032952.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 171 str. F0337] gi|320135713|gb|EFW27777.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 171 str. F0337] Length = 277 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 81/310 (26%), Gaps = 65/310 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ + N+N + + + ++ DI+ LQE+ + +A Sbjct: 1 MRIATVNVNGIRA---------------AARKGMGEWLTASAPDILLLQEVRADEQIAVD 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-----SYPLLGAKDSFS 138 + R+ + +AVR L + + P D S Sbjct: 46 L-LPGYEAAIWPCRIKGRAG--------VGVAVRDGGPATLGELRYGVAAPGTEEPDVDS 96 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + L +++ V+ +L S + L+ + D + Sbjct: 97 GRWLEADLSLTGFDGVEQLTVISAYLHSGQLGTEKMDQKYAHLELVD---ARMADLLAAA 153 Query: 199 KESLVPFVIAGDFNRKINYLGNNDD-----------------FWKTIDPNDSLIRFPKEK 241 ++ ++AGD N + + Sbjct: 154 RDGGPQVLMAGDLNVVRSERDIKNWKPNHNKIAGVMDEEIAHLEGWFASGWVDASRHLVG 213 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 D + IDY V+ + + D R Sbjct: 214 DEEQGPYTWWSQRGKAFDNNAGWRIDYQVLTPALAERARSVTV-------DRAPDYASRW 266 Query: 293 SDHCPISIDY 302 SDH P+ ++Y Sbjct: 267 SDHAPLVVEY 276 >gi|228913758|ref|ZP_04077383.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228845697|gb|EEM90723.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 190 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 57/168 (33%), Gaps = 15/168 (8%) Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWIT- 196 R+ + G+ + V+ HL S + S Q AQ + +++ Sbjct: 27 TRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKVQPLVLKSEEKRVQLAQEVNNFVQG 86 Query: 197 -QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 QKK + P V+ GD N KT++ + + N Sbjct: 87 IQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGTNLKNMLNTVPKENRYTYIHEGNAQ 141 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D+ ++ N + + ++ +I R+SDH P+ D Sbjct: 142 VLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGRVSDHDPVLAQID 185 >gi|213691818|ref|YP_002322404.1| exodeoxyribonuclease III Xth [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523279|gb|ACJ52026.1| exodeoxyribonuclease III Xth [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457912|dbj|BAJ68533.1| putative exodeoxyribonuclease [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 286 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 80/311 (25%), Gaps = 57/311 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VA 81 + + + N+N + + + +A D+ +QE+ + V Sbjct: 2 TITITTSNVNGIRA---------------AKRKGIEDWAGKHAPDVWCIQEVRAPQDDVD 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRD----SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +F + + + + + + + + ++ ++D Sbjct: 47 SIFDEFGFEYATAGKIEAPANLHAMNEVCRVKGRAGVGLLTDLEVLDKRYGLPGLSEDVD 106 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 S R + G I V +++ + D L + + + Sbjct: 107 S---GRWIETDVKTPEGYAITVASVYVHAGNTDD--PTKMEQKYRFLDTMLKRMGALRDE 161 Query: 198 KKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEK 241 V+ GDFN K +D + + Sbjct: 162 AAHGGKQAVLCGDFNIAHTPLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLA 221 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + IDY + + + D + KR Sbjct: 222 GDIQGPYTWWSQRGRAFDNNVGWRIDYQFATPELAE-------TARGFVIDKAPTYDKRW 274 Query: 293 SDHCPISIDYD 303 SDH P++I Y+ Sbjct: 275 SDHAPLTITYE 285 >gi|208435390|ref|YP_002267056.1| exodeoxyribonuclease [Helicobacter pylori G27] gi|208433319|gb|ACI28190.1| exodeoxyribonuclease [Helicobacter pylori G27] Length = 250 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 81/303 (26%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++DAD+ +QE + + + Sbjct: 1 MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + + D R Sbjct: 42 QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINMEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + ++++++ + S + + + L+ Sbjct: 91 -----VVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFRKFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFSELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|326381939|ref|ZP_08203632.1| exodeoxyribonuclease III [Gordonia neofelifaecis NRRL B-59395] gi|326199365|gb|EGD56546.1| exodeoxyribonuclease III [Gordonia neofelifaecis NRRL B-59395] Length = 281 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 81/307 (26%), Gaps = 52/307 (16%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + + N+N + R+ + +L + + D+V +QE+ + +A Sbjct: 2 STSAFSVTTINVNGIRA--------AVKHRSEENLGML-PWLETAAPDVVLMQEVRASDA 52 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 +A+ + + + + + + + + D R Sbjct: 53 LARKALQPALDAGWHFVHTESEA------KGRAGVGILSRQQPSAVRIGFGSEEFDVAGR 106 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 +E +I+G + ++L + L E L + + Sbjct: 107 Y-----IEADFDIDGDTVTAASLYLPTGAALTENEKDVEKYEEKLRF-LTAFGPHLDKLL 160 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKT---------------IDPNDSLIRFPKEKDSR 244 S V+AGD+N + + + + Sbjct: 161 GSGGLAVVAGDWNIAPDERDIKNWKGNVKNAGFLPHEREWVAGLLEAGWVDLARAHHGDV 220 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + IDY + + + D + R SDH Sbjct: 221 AGPYAWWSWRGKAFDNDAGWRIDYHLATPALAERAQRTWV-------DRADAYHLRWSDH 273 Query: 296 CPISIDY 302 P++ + Sbjct: 274 APVTAVF 280 >gi|269213939|ref|ZP_05983198.2| exodeoxyribonuclease III [Neisseria cinerea ATCC 14685] gi|269144958|gb|EEZ71376.1| exodeoxyribonuclease III [Neisseria cinerea ATCC 14685] Length = 274 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S N+N + + +Y ADIV +QE+ + A Sbjct: 17 LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 61 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 KN + ++ +AV K +G R Sbjct: 62 DMKNPHGMHGHWHCAEKRG--------YSGVAVYSKRAP----DNVQIGMGIEEFDREGR 109 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + K+ V+ ++L S + + + + + K Sbjct: 110 F-----VRCDFGKLSVISLYLPSGSSAEERQQVKYRFLDVFYPMLEAM-------KNEGR 157 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248 V+ GD+N + + + + Sbjct: 158 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDNPGY 217 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY ++ + + ++ SDH P+ Sbjct: 218 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 266 Query: 300 IDYDF 304 ++YD+ Sbjct: 267 VEYDY 271 >gi|332864503|ref|XP_001169567.2| PREDICTED: endonuclease/exonuclease/phosphatase family domain-containing protein 1 isoform 2 [Pan troglodytes] Length = 569 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 35/296 (11%), Positives = 77/296 (26%), Gaps = 35/296 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+ S V N R TLL K ++ +QE+ A+ K Sbjct: 261 LRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 311 Query: 84 FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKKNV-RVLQQSYPL 130 + + + + + Sbjct: 312 CTELNQPTLPNIRKWKGPRGCWKAVVAEKPSNQLQKGAGYAGFLWDAAAGMELRDAGSQE 371 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + + ++ + ++++HL + L S + + S Sbjct: 372 SSPSNGHGKPAGPSPYLGRFKVGSHDLTLVNLHLAALTLLGSENPSKNHSDGHR---LAS 428 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + + + +I GDF + + + I + + KN Sbjct: 429 FAQTLQETLKGEKDVIILGDFGQGPDSNDYD------ILRKEKFHHLIPAHTFTNISTKN 482 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302 + +D + ++ K I S+HCP+ + Sbjct: 483 PQGSKSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEL 538 >gi|238650992|ref|YP_002916848.1| exodeoxyribonuclease III [Rickettsia peacockii str. Rustic] gi|238625090|gb|ACR47796.1| exodeoxyribonuclease III [Rickettsia peacockii str. Rustic] Length = 260 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 88/303 (29%), Gaps = 69/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + LLR + + DI+ LQE+ A Sbjct: 1 MKIATWNIN----------------SIKTRLNLLRNFLSKENPDILLLQEIKCETA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ + +A+ K + +++ R Sbjct: 41 ------KFPFDALSDLPYNSYVHGQKSYNGVAIISKFP----ADEIIKDFPNNYCSDQAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E+ + + ++ ++ + F+ S + + ++++ KK Sbjct: 91 F-LEIKLSLPIGFCNIISLYAPNGSFVGSDKFVAKLAF------YDNFINYLSTKKSFDE 143 Query: 204 PFVIAGDFNRKINYLGNNDDFW---------------KTIDPNDSLIRFPKEKDSRCNAN 248 +I GDFN + +TI + + S+ Sbjct: 144 KTIIGGDFNIAPFDIDVYSPKLLAETTCFTEVEQKKLRTILNSGFEDLYRLMHPSKQE-F 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID + N +L D ++ SDH P+ Sbjct: 203 SWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYM-------DYNLRTQEKPSDHIPVI 255 Query: 300 IDY 302 + Sbjct: 256 ASF 258 >gi|15965006|ref|NP_385359.1| hypothetical protein SMc01813 [Sinorhizobium meliloti 1021] gi|307301078|ref|ZP_07580847.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti BL225C] gi|15074185|emb|CAC45832.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021] gi|306904033|gb|EFN34619.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti BL225C] Length = 285 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 38/283 (13%), Positives = 78/283 (27%), Gaps = 53/283 (18%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAV 80 + + S+NI+ +G D + Q + ADIV LQE Sbjct: 33 GDIVIASYNIHKCVGTDGRF-----------DPPRIAQVIAEIGADIVALQEADQRFGER 81 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 A + + + + H + + ++ + L G Sbjct: 82 AGLLDLEHLRREAHLVSVPISPFSEKGHGWHGNVLLIREGAVSDVRQLKLPG-------V 134 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R A+ + +++ + V+ HL ++QA+ L Sbjct: 135 EPRGALVVDLDLKAGPLRVIAAHLGLLRHS-------------RARQAETLLK--ATADG 179 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 + P ++ GD N + L S + + +P+D Sbjct: 180 AGRPTLLIGDLN---------EWRMGKRSSLSFLSPIFDPSHSAVASFPSRFPLLPLDRV 230 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + + + SDH P+ D Sbjct: 231 LGNPHHLVTSVAV----------HDTPLARVASDHLPVKASID 263 >gi|330814067|ref|YP_004358306.1| exodeoxyribonuclease III [Candidatus Pelagibacter sp. IMCC9063] gi|327487162|gb|AEA81567.1| exodeoxyribonuclease III [Candidatus Pelagibacter sp. IMCC9063] Length = 247 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 37/276 (13%), Positives = 79/276 (28%), Gaps = 53/276 (19%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 ++ Y K + D++ LQE+ + + + + I + Sbjct: 2 RIRVNQVKDYLKKKEIDVLVLQEIKTED----------KNFPHEDFKKIGYHSYSFGQKS 51 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 + +A+ K + + ++ +R + V N KK ++ I+L + + Sbjct: 52 YNGVAIISK------EELKVTTSEFKDPLGQSR-CIAAEVSHNDKKFLLVSIYLPNGNPI 104 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN-------YLGNNDD 223 ++ + Y + +I K + +I GDFN + ND Sbjct: 105 NTEKYDYKKK------WMDVFEKYIVGKFKKNKNIIITGDFNVIPSEEDVGNPEDWTNDA 158 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNA-------NKNLRNKI---------PIDYFVMDQNAY 267 +K + ID++++ + Sbjct: 159 LFKLEIRKKFRSLLNLGFKDGFRLFNKEPKEYTFWDYQQGSWQRNKGLRIDHYLVSDSMI 218 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + L D +R SDH PI Sbjct: 219 QDLK-------TIEIDKFTRDNERPSDHVPIRCVLT 247 >gi|323144610|ref|ZP_08079198.1| exodeoxyribonuclease III [Succinatimonas hippei YIT 12066] gi|322415619|gb|EFY06365.1| exodeoxyribonuclease III [Succinatimonas hippei YIT 12066] Length = 268 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 82/311 (26%), Gaps = 73/311 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAV 80 ++L SWN+N + W ++ + D++ LQE + Sbjct: 2 DIKLASWNVNGIRAVSAKEDW---------------KWFSDCGYDVISLQETKASVEQMP 46 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + ++++ ++ AV K + + D + Sbjct: 47 ESITDPVGYHAYFAS---------SIVKKGYSGTAVFSKKEPLS----HEIELPDPEFQG 93 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLD-SLENTYSPSCSLLSQQAQWLKDWIT--Q 197 R V + +K + + + + + + + + Q Sbjct: 94 EGRI-----VHLEFEKFHFFNGYFPNGGADILDESGKPTGEFKRVPYKMAFFDSFFKYAQ 148 Query: 198 KKESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 K P V+ GDFN N L F + F Sbjct: 149 KLRESKPIVVCGDFNIAHNEIDLARPKTNVKNTGFLPLERAFLDKFVAAGYIDTFRFVHG 208 Query: 243 SRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + K IDYF + + + + ++ S Sbjct: 209 DLKDQYTWWSYKTRARAKNVGWRIDYFFVSEELKENIKDAWIENDVF-----------GS 257 Query: 294 DHCPISIDYDF 304 DHCPI + F Sbjct: 258 DHCPIGLCLSF 268 >gi|152986913|ref|YP_001348510.1| hypothetical protein PSPA7_3150 [Pseudomonas aeruginosa PA7] gi|150962071|gb|ABR84096.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 245 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 86/256 (33%), Gaps = 43/256 (16%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVF-----PKNTWCIFY-STERLINHSKRDSN 107 LR+ +++ AD+VFLQE+ +++ P + S + + Sbjct: 26 LPELREAVRSVGADLVFLQEVLGSHSLHAARLPAWPPAPQYEYLADSMWPQFAYGRNAVY 85 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 + H A+ K+ + ++ + A + R + +++I G+ + + +HL Sbjct: 86 PEGHHGNALLSKHPILDHRNLDVSVAGN-----EERGLLHAVIDI-GRPLHAVCVHLGLR 139 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 + +Q Q L + + P V+AGDFN + Sbjct: 140 -------------EAQRQRQLQLLCELV-TGLPEREPVVVAGDFNDWRQRAD------RL 179 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + F + + +P+D + + S + Sbjct: 180 LAGCGLREVFVGAEGRPARSFPARWPLLPLDRIYLRNARGRQPRILS-----------RR 228 Query: 288 RGKRLSDHCPISIDYD 303 LSDH P++++ + Sbjct: 229 PWSHLSDHLPLAVEVE 244 >gi|311895579|dbj|BAJ27987.1| hypothetical protein KSE_21650 [Kitasatospora setae KM-6054] Length = 252 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 78/285 (27%), Gaps = 52/285 (18%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A++VR++S+N+ +L D + + + D+V +QE Y Sbjct: 15 PGGARRVRVLSYNVRSL----------------RDDRAAVARVIRACAPDVVCVQESPRY 58 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 K W + ++ R + + + + + L + Sbjct: 59 WKTEKAAA---WLAHKTGMVILAGGGRVAAGPLLLGNL---RVDVLELRDALLPKTRGLH 112 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 +R + + + V HL + +Q L+ + Sbjct: 113 ARGFASALLRI---GGSRPFSVTSCHLSLEP-------------AERLRQFDLLRGQLR- 155 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 P VIAGDFN + G + D + + I Sbjct: 156 ---PGEPGVIAGDFNEGPDGPGWRSLAAELTDAHAKAPW------GGTYTSVPEEPYQRI 206 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D + + E D+ + +DH P+ Sbjct: 207 DGVFATPDVEVLGCGVPYPLPGVAEADL----RAATDHLPVLAAL 247 >gi|229095675|ref|ZP_04226655.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29] gi|228687708|gb|EEL41606.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29] Length = 190 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 16/190 (8%) Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS- 178 ++L ++ +G +++ + R+ + G+ + V+ HL S + Sbjct: 6 VPKLLDKNVIRIGDENALFDS-TRKPLAAEFTFQGQNVVVVANHLNSKLGDATPFGKVQP 64 Query: 179 ---PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 S Q AQ + ++ QKK + P V+ GD N K ++ Sbjct: 65 LVLKSEEKRIQLAQEVNYFVQGIQKKNANAPVVVLGDMNDFEFSKP-----LKALEGTIL 119 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + N +D+ ++ N + + ++ +I R+S Sbjct: 120 KDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTVVDPVHLNSNIMKEHGRVS 175 Query: 294 DHCPISIDYD 303 DH P+ D Sbjct: 176 DHDPVLAQID 185 >gi|116511761|ref|YP_808977.1| metal-dependent hydrolase [Lactococcus lactis subsp. cremoris SK11] gi|116107415|gb|ABJ72555.1| Metal-dependent hydrolase [Lactococcus lactis subsp. cremoris SK11] Length = 352 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 43/316 (13%), Positives = 85/316 (26%), Gaps = 55/316 (17%) Query: 21 AQKVRLVSWNI--------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + +++++NI G + S S + K + D +Q Sbjct: 56 GKTYKMMTFNIGYGSYPPSFNFFMDGGDDVHAYSKSAVKSAIQEDIRLIKKENPDFGNIQ 115 Query: 73 EMGSYNAVAKVFPKNT--------WCIFYSTERLINHSKRDSNNDI---HTAIAVRKKNV 121 E+ ++ + + + + I + I K Sbjct: 116 EIDWQGDRSQQVNEPQLVRAGLPDYSSVLTQNYDSAYLFYPVTKPIGKAKSGIMTYSKYE 175 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELL---VEINGKKIWVLDIHLKSFCFLDSLENTYS 178 Y L + RA + ++ + KK + + HL +F Sbjct: 176 IENSTRYKLPIETNFNKFFDLDRAFSVSLLPIKNSDKKFVIFNTHLSAFITDQ------- 228 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----------KTI 228 + QQ L D + + + D+N + + + W K + Sbjct: 229 ---KIQKQQLVTLFDAMKKYVNKGDYVICGADYNHALAGKAHPELTWMKEFPTENLTKGM 285 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNK-IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 KN +N ID F++ N IQ Sbjct: 286 RVVAPTNAPTVRSLDFAYHQKNPKNTFGIIDGFLVSNNIKDLKIQ------------TID 333 Query: 288 RGKRLSDHCPISIDYD 303 + SDH P+ +D+ Sbjct: 334 NQFKSSDHQPVLMDFS 349 >gi|315652833|ref|ZP_07905807.1| exodeoxyribonuclease III [Eubacterium saburreum DSM 3986] gi|315485035|gb|EFU75443.1| exodeoxyribonuclease III [Eubacterium saburreum DSM 3986] Length = 259 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 80/303 (26%), Gaps = 78/303 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +++SWN+N L + +++DADI +QE ++ Sbjct: 10 KMISWNVNGLRAAVTKGF---------------LDFFRDIDADIFCIQESKLSEGQIELD 54 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + + ++ +AV K+ + + D+ R Sbjct: 55 LPGYYDYWNYAT-----------KKGYSGVAVFTKDKPINVTYGIGIDEHDNEGR----- 98 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ + +++ + + + + A L++ P Sbjct: 99 ----VITAEYDEFYLITCYTPNSQRGLTRLDYRMTWEDAFLDYALKLEE--------KKP 146 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + GD N I + + F + +A Sbjct: 147 VIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERAKMDIILSSGFVDSFRLLYPDKTDAYS 206 Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 IDYF++ + + + SDHCP+ + Sbjct: 207 WWSYMGGARAKNVGWRIDYFIVSAKLKDRIKEAKIHSEVL-----------GSDHCPVEL 255 Query: 301 DYD 303 D + Sbjct: 256 DIE 258 >gi|301167794|emb|CBW27378.1| conserved hypothetical protein [Bacteriovorax marinus SJ] Length = 365 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 38/383 (9%), Positives = 100/383 (26%), Gaps = 98/383 (25%) Query: 2 IRKYVLAL-VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNS-------------- 46 ++ ++++ +F +PC + + + ++S+N+ L + + Sbjct: 1 MKSLLISMAIFISLPC---LGKTIEIMSYNVENLFDIVHDEGKNDWTFLPTKTKGKKEAC 57 Query: 47 ------------------VKRTTSDYTLLRQYAKNLD--ADIVFLQEMGSYNAVAKVFPK 86 + + + I+ L E+ + ++++ Sbjct: 58 DKVKSSYRKKECHETDWAKDNLEVKIENITKMVRRDGKLPAILALSEIENERVISQLAKF 117 Query: 87 NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146 + F ++ I A+ + + + F +R + Sbjct: 118 IGYKKFAVSDSPDKRG-------IDLAVLWNETEDVKFLSKKEHVLKGEYFKDRPSRNIL 170 Query: 147 ELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 E+ +I K+ + V H S + L+++ + + K Sbjct: 171 EVEFQIGKKEKLTVFVNHWPSLSNPTE---ARIIAAKTLAKRTKEILK-----KNKNQNI 222 Query: 206 VIAGDFN-------RKINYLGNNDDFWKTI-----DPNDSLIRFPKEKDSRCNANKNLRN 253 + GDFN + DD +K + + Sbjct: 223 MAMGDFNTIDENYPHPFKSVLYKDDLYKDLHTTFKKDKSISYNVKDQMAPGSYFYGRGMT 282 Query: 254 KIPIDYFVMDQNAY------------------------------KFLIQESFSEILYNED 283 +D N K+L + + + Sbjct: 283 WNLLDRIFFTNNLTNNSGLEIDIASYQIYAPSFATRTYEYRSKGKYLYGSTIKGTPFRYE 342 Query: 284 DIKSRGKRL--SDHCPISIDYDF 304 + +R SDH P+ ++ + Sbjct: 343 HNSTSNRRAGYSDHFPLIVNLKY 365 >gi|187251652|ref|YP_001876134.1| exodeoxyribonuclease III Xth [Elusimicrobium minutum Pei191] gi|186971812|gb|ACC98797.1| Exodeoxyribonuclease III Xth [Elusimicrobium minutum Pei191] Length = 255 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 76/305 (24%), Gaps = 80/305 (26%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAKV 83 R +SWN+N L ++ DI+ LQE S + Sbjct: 4 RFISWNVNGLRAVAKKGFM---------------EWFTKESPDILALQETKASPEQLEGG 48 Query: 84 FPKNT-WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + ++ST + + +AV K + D R Sbjct: 49 LKNPIGYHSYFSTAERKGY----------SGVAVYSKEEPLSVSESIGNSTMDGEGR--- 95 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + + K + ++I+ + + + + Q L Sbjct: 96 ------TLVLEFKNFYFINIYFPNGGQGEHRIEYKLRFYNEFLKLTQKLMK--------Q 141 Query: 203 VPFVIAGDFNRKINYLGN---------------NDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N + N F + Sbjct: 142 KTVIVCGDVNTAHKETDLARPKENEGNTGFLPKERAWLDKFFENGLTDTFRLFTKDGGH- 200 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 K IDYF++D + + + SDHCPI Sbjct: 201 YTWWDYKTKARERNVGWRIDYFMIDTLSKNKVKNS-----------YMLPEVQGSDHCPI 249 Query: 299 SIDYD 303 +++ + Sbjct: 250 ALEIN 254 >gi|152002660|dbj|BAF73613.1| sphingomyelinase C [Streptomyces griseocarneus] Length = 339 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 36/299 (12%), Positives = 84/299 (28%), Gaps = 33/299 (11%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++++N +S L+ N + + + + D+V LQE A Sbjct: 50 SLKVLTYNTFLMST----GLYPNWGQEHRAREIAAAGFFQGN--DVVVLQEAFDNAAADG 103 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGAK 134 + Y T + + V K V ++ A Sbjct: 104 LKAAAADRYPYQTPVVGRSRDGWDATGGKYSATTPEDGGVTVLSKWPIVRKEQVIFNDAC 163 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + + N+ +++ + G ++ V+ H +S + + S+Q + + + Sbjct: 164 GADWWS-NKGFAYVVLNVGGTRVHVVGTHAQS----TDSGCAAGEAAADRSRQFRQIDAF 218 Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDFW------KTIDPNDSLIRFPKEKDSRCNA 247 + + ++AGD N + KE Sbjct: 219 LDAKNIPADEQVMLAGDLNVDSHSAEYASMLADGDLAPADSRAGHPYSFDTKENSIAAYR 278 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPISI 300 + +DY + + + + S + LS H P+ Sbjct: 279 YPT-DPREDLDYVLHRNGHARPAGWRNTVVQETSAPWTVSSWGKRYTYTDLSGHYPVIA 336 >gi|262067673|ref|ZP_06027285.1| DNAse I protein DHP2 [Fusobacterium periodonticum ATCC 33693] gi|291378397|gb|EFE85915.1| DNAse I protein DHP2 [Fusobacterium periodonticum ATCC 33693] Length = 286 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 90/297 (30%), Gaps = 35/297 (11%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 L+ F + T S A++ + S+NI L D + + D Sbjct: 18 ILMIFTMFSTMSSAEEAYIASFNILRLGA-------------AEKDMVQTAKLLQGF--D 62 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRKKNVRVLQQ 126 +V L E+ + + + + + + I+ S+ + +K V+ ++ Sbjct: 63 LVGLVEVINKEGIEDLVDELNRQSPNTWDYHISPFGVGSSKYKEYFGYVYKKDKVKFVKS 122 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 K S R +I+ ++ +H + Sbjct: 123 EGFYKDGKSSL----LREPYGATFKIDNFDFTLVLVHTIYG--------NNESQRKAENF 170 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + + D+ K +IAGDFN + +K D I + Sbjct: 171 KMVEVYDYFQDKDRKENDILIAGDFNL-YALDESFRPMYKHKDKITYAIDPAIKTTIGTK 229 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 N D F Q S + ++E D + K +SDH P+ I + Sbjct: 230 GRANSY-----DNFFFSQKYTTEFTGSS-GALDFSEKDPQLMRKIISDHIPVFIVVE 280 >gi|167762608|ref|ZP_02434735.1| hypothetical protein BACSTE_00964 [Bacteroides stercoris ATCC 43183] gi|167699714|gb|EDS16293.1| hypothetical protein BACSTE_00964 [Bacteroides stercoris ATCC 43183] Length = 378 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 33/341 (9%), Positives = 81/341 (23%), Gaps = 57/341 (16%) Query: 1 MIRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKN-----------S 46 M + V +F + + + +N+ L + + + + Sbjct: 37 MRKLIVFFSFWFSATIVVAQNTERKLYSIAFYNLENLFDTIHDAGKNDYDFLPDGSYRWT 96 Query: 47 VKRTTSDYTLLRQYAKNL-------DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99 K+ + L L ++ + E+ ++ + + + + Sbjct: 97 AKKYEAKLHNLSDVLSALSRNLVPEGPAVIGVAEVENHRVLTDLVSQPAMANYKFVHYEG 156 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 I A+ + V L + + R + + + G+++ Sbjct: 157 P-----DRRGIDCALLYDPQQFAVTNSKLVLSAPFEGDTVHLTRGFLIVDGRMAGERVCF 211 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 + H S SP ++Q + L D + ++ + + GD N Sbjct: 212 IVNHWPSR-------GAKSPVRVHAARQVKALTDSL-MHEDKKLKLFVMGDMNDDPMDES 263 Query: 220 N-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 + +D D V+ + K Sbjct: 264 MQTLGARKYISGMKANQFFNPWWEILEDKGVGTLLYRGKWNLFDQIVLSRPLVKAKKGLR 323 Query: 275 FSE------------------ILYNEDDIKSRGKRLSDHCP 297 + + SDH P Sbjct: 324 YDHSEVFIRDYLIQQDGKYKGSPLRTHGGRVWLNGYSDHLP 364 >gi|114612832|ref|XP_527721.2| PREDICTED: similar to KIAA1706 protein isoform 4 [Pan troglodytes] gi|114612836|ref|XP_001169584.1| PREDICTED: similar to KIAA1706 protein isoform 3 [Pan troglodytes] Length = 569 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 35/296 (11%), Positives = 77/296 (26%), Gaps = 35/296 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+ S V N R TLL K ++ +QE+ A+ K Sbjct: 261 LRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 311 Query: 84 FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKKNV-RVLQQSYPL 130 + + + + + Sbjct: 312 CTELNQPTLPNIRKWKGPRGCWKAVVAEKPSNQLQKGAGYAGFLWDAAAGMELRDAGSQE 371 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + + ++ + ++++HL + L S + + S Sbjct: 372 SSPGNGHGKPAGPSPYLGRFKVGSHDLTLVNLHLAALTLLGSENPSKNHSDGHR---LAS 428 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + + + +I GDF + + + I + + KN Sbjct: 429 FAQTLQETLKGEKDVIILGDFGQGPDSNDYD------ILRKEKFHHLIPAHTFTNISTKN 482 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302 + +D + ++ K I S+HCP+ + Sbjct: 483 PQGSKSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEL 538 >gi|223278400|ref|NP_788782.2| DNA-(apurinic or apyrimidinic site) lyase [Bos taurus] gi|113912167|gb|AAI22611.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Bos taurus] gi|296483354|gb|DAA25469.1| DNA-(apurinic or apyrimidinic site) lyase [Bos taurus] Length = 318 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 77/311 (24%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + + +++ SWN++ L + K DI+ LQE Sbjct: 53 TSPSGKSATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K+ + S + S+ + ++ + + + + G Sbjct: 98 KCSE--NKLPVELQELSGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R V ++ ++ + + + L Sbjct: 148 EEEHDQEGRVIVA-----EYDAFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLTDSFR 254 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ Q+ L Sbjct: 255 HLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSQSLLPALCDSKIRSKAL--------- 305 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 306 --GSDHCPITL 314 >gi|325293378|ref|YP_004279242.1| hypothetical protein AGROH133_07235 [Agrobacterium sp. H13-3] gi|325061231|gb|ADY64922.1| hypothetical protein AGROH133_07235 [Agrobacterium sp. H13-3] Length = 369 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 47/366 (12%), Positives = 95/366 (25%), Gaps = 85/366 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTS----DYTLLRQYAKNLDADIV--------- 69 +RL ++NI L + + ++N +R + D Y A V Sbjct: 2 SLRLATFNIENLLTRFDFTGFRNQTRRDRAIQLFDIRDEATYQALESARAVSSTDDTRQL 61 Query: 70 -------------FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 LQE+ + A+ + + + + + + I A+ + Sbjct: 62 SALAIADADADILCLQEVDNMAALQAFEYGYLYRMVGNGYLQKYLVEGNDSRGIDVAVVM 121 Query: 117 RK------KNVRVLQQSYPLLGAKD-------------SFSRAGNRRAVELLVEINGKKI 157 R+ K + +S+ L ++ + R +E+ + + GK + Sbjct: 122 REQTRDGDKIEVIDIKSHAALTYRNLDLFNPALAATNQIDDKIFKRDCLEIDLRVGGKPL 181 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT----QKKESLVPFVIAGDFNR 213 + H KS + + + +A ++ I F I GD N Sbjct: 182 TLYVTHFKSMTNARDAIDARLATMPIREAEAMAVRRIIENRWGANNTRNKNFAICGDMND 241 Query: 214 KINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-- 255 + + + R Sbjct: 242 YQERISISGDRRSGYSFTPVEEERSALDIFTADDFVTNPMSRRDVMDRWTLYHSRGPQEQ 301 Query: 256 ---PIDYFVMDQNAYKFLIQESFSEILY------------NEDDIKSRGK---RLSDHCP 297 +DY + + I D G + SDHCP Sbjct: 302 HLCQLDYIWLSPHLAHINATRVPEIIRAGQPYRTVFPPGQEVDRYPRTGWDRPKASDHCP 361 Query: 298 ISIDYD 303 + + D Sbjct: 362 VVMTLD 367 >gi|153805804|ref|ZP_01958472.1| hypothetical protein BACCAC_00041 [Bacteroides caccae ATCC 43185] gi|149130481|gb|EDM21687.1| hypothetical protein BACCAC_00041 [Bacteroides caccae ATCC 43185] Length = 368 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 87/305 (28%), Gaps = 67/305 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++++S+N+ S E + Y N ADI+ LQE + Sbjct: 106 GSIKILSYNVMNFSNLEKKDGKNP-----------ILSYLVNSKADIICLQEYNAAQNKK 154 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + S+ +A K + + Sbjct: 155 YLTEADIKKALKAYPYYSVRRQNRSD----VQLACFSKYPILSVSPIDYESTYN------ 204 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------- 178 +V+ ++ +N + +++ HL+S Y Sbjct: 205 --GSVKYVLAVNNDTVTLINNHLESNKLTKEDRGMYEDMIKDPNAKKVKTGLRQLVKKLA 262 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + ++ + QA + IT+ K + GDFN + + + +D F Sbjct: 263 EASAIRASQADSVNKAITESKYPT--IIACGDFNDG-SISYTHRILTQKLDD-----AFT 314 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + ID ++ N + + R + SDH PI Sbjct: 315 QSGKGLGISYNQNKFYFRIDNILISPNLKAY-------------NCTVDRSIKASDHYPI 361 Query: 299 SIDYD 303 Sbjct: 362 WCHIS 366 >gi|325189192|emb|CCA23715.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 283 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 27/293 (9%), Positives = 77/293 (26%), Gaps = 26/293 (8%) Query: 10 VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 + ++ A + ++S+N+ T + + W + L+ + + + D + Sbjct: 6 LLLILSAPTLTALEFSVISYNVRTSNAPDVSYPWTDRK-------QQLQPFIEAENPDFI 58 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 QE + + + Sbjct: 59 GTQEASPEQFEFFQQALGDTYGITGECAGECYENERPFLMYKKSEWNSLEFGSFALSDRQ 118 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + ++++ R + I + + LE++ + Sbjct: 119 EIRGSNTWNLEYKRSVSWQRFQHKSNSISICLFNTHFDMTKGHLESS------------K 166 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + ++ +S F++ GD N + + + + Sbjct: 167 LIVQERSKICKSFDFFILTGDLNANLQDDAIHYLKGIPLISTLQQCGYQGGTFIGPGVFT 226 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + DY + N E+ I + D + G+ ++DH + + Sbjct: 227 GPLSSAVFDYIFIQPN-------ENIRIIGSSIIDSRRNGQAITDHAIVKTTF 272 >gi|302340168|ref|YP_003805374.1| endonuclease/exonuclease/phosphatase [Spirochaeta smaragdinae DSM 11293] gi|301637353|gb|ADK82780.1| Endonuclease/exonuclease/phosphatase [Spirochaeta smaragdinae DSM 11293] Length = 363 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 46/364 (12%), Positives = 89/364 (24%), Gaps = 83/364 (22%) Query: 5 YVLALVFFLVPCTASV-------AQKVRLVSWNINT-LSEQEGVSLWKNSVK-------R 49 +V A+ FL CT ++ L+SWN+ ++ + + Sbjct: 14 FVFAMAVFLSSCTGCSWPTESRRDDRISLMSWNVQNVFDARDDGTEYPEFDPASGWGLGD 73 Query: 50 TTSDYTLLRQYAKNL---DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 L + + AD+V L E+ + + + Y + + + Sbjct: 74 YRGRLASLSEVIRLAVPGGADVVMLMEIEHGGVLDDLANDYVQGLGYDYWA----ASQGA 129 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 ++ + I R + +S L + G+ +++ H KS Sbjct: 130 DSAVQLGILSRFPIRKARSRSIHLPSSPSLRPIFEVELE-----MEEGEPLFLFVCHWKS 184 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG------- 219 + A ++ I + ++ GD N N Sbjct: 185 KSGGAEDTEPLRIAS------ASLVRKRIQEL--EGRQVIVVGDLNEAWNEWDLVGGAYQ 236 Query: 220 -----------------------NNDDFWKTIDPND------SLIRFPKEKDSRCN-ANK 249 + W + D D L + CN + Sbjct: 237 TALLPVSAKRQSGELENGGVLFDEAEGLWISGDREDAGADGCGLPLYTPWPSCDCNGSYY 296 Query: 250 NLRNKIPIDYFVMD-----------QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ID+ + + E G SDH PI Sbjct: 297 YRGGWEGIDHMLFSAALVDGRGIDLDSFSVAAEAPWCDEDGIPVSYRMRDGYGYSDHLPI 356 Query: 299 SIDY 302 Sbjct: 357 VATL 360 >gi|160891549|ref|ZP_02072552.1| hypothetical protein BACUNI_04001 [Bacteroides uniformis ATCC 8492] gi|156858956|gb|EDO52387.1| hypothetical protein BACUNI_04001 [Bacteroides uniformis ATCC 8492] Length = 366 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 83/301 (27%), Gaps = 64/301 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++L+S+NI + Y K ADI+ LQE + + Sbjct: 101 SIKLLSYNIMGFDGAAKQDGKNP-----------ILTYLKESGADILCLQEYSTVQSSKH 149 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + K+ + ++ S IA K + + Sbjct: 150 LSQKDVERELKAYPYHRINT-VGSGKGHTNKIACYSKFPILSSRILDYPS--------EY 200 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSL-----------------------ENTYSP 179 +V ++I + +++ HL+S + + Sbjct: 201 NGSVLYEIKIEEDTVTLINNHLESNKLTKADKVVYEDMLKSPEKEKVKSGARLLIRKLAE 260 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + ++ + QA + I ++ GDFN + + +D F + Sbjct: 261 ASAIRAPQADTIAHEIA--ASPHPYIIVCGDFNDTPISYA-HRTIAQDLDD-----AFTQ 312 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + R ID + +N + + R + SDH PI Sbjct: 313 SGRGLGISYNQNRFYFRIDNILTSKNLRAY-------------NCTVDRSIKESDHYPIW 359 Query: 300 I 300 Sbjct: 360 C 360 >gi|148979192|ref|ZP_01815371.1| extracellular nuclease-related protein [Vibrionales bacterium SWAT-3] gi|145961950|gb|EDK27240.1| extracellular nuclease-related protein [Vibrionales bacterium SWAT-3] Length = 733 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 48/372 (12%), Positives = 102/372 (27%), Gaps = 91/372 (24%) Query: 22 QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDADIVFLQE 73 +R+ ++N+ N + G ++ R + + LDADI+ L E Sbjct: 338 GDLRIATFNVLNYFNSPFGGDANQHGNNRGANTITEFEMQQEKIVNAILRLDADIIGLME 397 Query: 74 MGSY-----NAVAKVFPK---------NTWCIFYSTERLINHSKRDSNND---IHTAIAV 116 + + +A+ ++ + + + + + I T + Sbjct: 398 IENNGFGEGSAIQQLVNQLNDRIEHKKDRYTFVAVDSNEDGVTDEMDSIGTDVITTGVIY 457 Query: 117 RKKNVRVLQQSY------------PLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDI 162 RKK V++ G + R ++ ++ G +K V Sbjct: 458 RKKVVKLKDSRVIAMPSQQAPEVLDDSGKVIEDGKNYQRDSLAPTFKVKGTKEKQTVAIN 517 Query: 163 HLKS--------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL------ 202 H KS + + A L + + K Sbjct: 518 HFKSKGSKCWEDAAPVEQGGQGGVDADKQGSCENFRVAAAVALGEALDGIKGHKVILGDM 577 Query: 203 ------VPFVIAGDF-------------NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 P ++ D+ N IN + D I N I +K Sbjct: 578 NSYGMEDPMLVLTDYSEEKYGKQIKAARNTYINGVEQFGDNGAVIAKNYGYINAVAQKHP 637 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK------------- 290 + +D+ ++ ++ ++ + I E + + Sbjct: 638 DSWSYSYNDEVGALDHLLVSESLKDMVVDATDWHINGGESTLFDYNEEYKGDLAKYQDHF 697 Query: 291 RLSDHCPISIDY 302 R SDH P ++ Sbjct: 698 RSSDHDPAVLEL 709 >gi|315637812|ref|ZP_07893002.1| exodeoxyribonuclease III [Campylobacter upsaliensis JV21] gi|315482053|gb|EFU72667.1| exodeoxyribonuclease III [Campylobacter upsaliensis JV21] Length = 252 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 79/304 (25%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNIN L ++ + D + QE+ A Sbjct: 1 MKLLSWNINGLRAICDKGG---------------LEWLREEKIDFIGFQEI---KASEDK 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FPK + + + + ++ + ++ + F R Sbjct: 43 FPKKIYEFPFKHMYFNSAKRA-----GYSGVMSLCNFESETKK-------CEFFDDDEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++E I + +I+ + + + ++ + + Sbjct: 91 -----VLEHRFNNIVLFNIYFPNG-------QKDEIRLNHKMKFYADFLVYLNKLLKEGK 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GD N L + + + F + Sbjct: 139 EVIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLALGFIDTFREINGDIKEKY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + L + ++ SDH P+ Sbjct: 199 SWWSYRMKARERNVGWRIDYFFISKGLKSKLKNAFIKDDIF-----------GSDHAPVG 247 Query: 300 IDYD 303 I+ D Sbjct: 248 IELD 251 >gi|170051904|ref|XP_001861978.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167872934|gb|EDS36317.1| conserved hypothetical protein [Culex quinquefasciatus] Length = 340 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 77/304 (25%), Gaps = 76/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 V++ SWN+ L ++ ++ DI+ LQE Sbjct: 88 VKISSWNVAGLRSWVEKGC---------------LEFLEHEAPDILCLQETKCTED---- 128 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + H + +A+ K + +D R Sbjct: 129 -----QLPEEARHIKGYHPYWLCKPGGYAGVAIYSKKMPFNVSYGLGDAEQDEDGRL--- 180 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +K +++ +++ + Q + L ++ Sbjct: 181 ------LTAEYEKFYLVCVYVPNAGRKLVTLPKRMRWDEKFLQYLRDL--------DAKK 226 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + D + + + F + + A Sbjct: 227 PVILCGDMNVAHAEIDLANPKTNKKNAGFTQEERDGMTNLLSHGFVDTFRQRYPEQKAAY 286 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 +DYF+ + ++ G SDHCPI+ Sbjct: 287 TFWTYMGNARAKNVGWRLDYFIASERLAGRVVDSVIR-----------PGVYGSDHCPIT 335 Query: 300 IDYD 303 + + Sbjct: 336 LLLN 339 >gi|126347700|emb|CAJ89415.1| putative endonuclease/exonuclease/phosphatase family protein [Streptomyces ambofaciens ATCC 23877] Length = 305 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 37/285 (12%), Positives = 78/285 (27%), Gaps = 59/285 (20%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAK 82 R+++WN+ +++V R ++ +QE + A+ + Sbjct: 72 RVMTWNLCN-------PCEESNVHR--------AAEIAAFAPQVLGVQEACVRDVEAIRE 116 Query: 83 VFPKNTWCIFYSTERL----INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 +++ + + N A+ S Sbjct: 117 HLENLHGLVYHVEYGMVLNKRSRCGGAPWNPGGFGQAILSAAPMTDHVSVEYPEGG---- 172 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + +R + + E+ G+ + V + HL S+ + QA L + + Sbjct: 173 -SEDRGYMAVTTEVGGQDVRVFNTHL-----------AQRRQESVRAGQAAVLATEVARH 220 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + V+ GD N + + W D + C A + + D Sbjct: 221 DRA----VVLGDLNAVPDAPELSR-LWALAVDADPQCHPTRTAAGSCQATTDWQ--SKFD 273 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 Y + + R SDH + D D Sbjct: 274 YVFLRG-----ITPAGHRVH----------ASRYSDHHQLYADLD 303 >gi|282882297|ref|ZP_06290928.1| exodeoxyribonuclease III [Peptoniphilus lacrimalis 315-B] gi|281297847|gb|EFA90312.1| exodeoxyribonuclease III [Peptoniphilus lacrimalis 315-B] Length = 275 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 85/305 (27%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWNI++L+ S + + R + ++ D D+ +QE Sbjct: 1 MKFISWNIDSLNAALTSSSNRAILTR------AVLSSIRDEDPDLFAVQETKLPPTGLSK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 K + + + ++ + + K + +YP +GA S G Sbjct: 55 KHKEILEKEFQDYSYVYVTSKEEARKSYAGTMIFYKKDLECKATYPEIGAPGSMDMEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + K + ++ + + + Q L + Sbjct: 114 -----IVTLEFKDFYFSTVYTPNAGDGLKRLSDRQVWDKKYLEYCQEL--------DKNK 160 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GDFN + + + F Sbjct: 161 PLVLCGDFNVAHKEIDLANPNNNHFSAGFTDEERTGFTNLLEGGFVDTFRLINGDVEGKY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF++ Q + + + + DH PI Sbjct: 221 TWWAQRIKTSKINNSGWRIDYFLVSQRIKDRVKKSHMMDSGQRQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 ILEID 274 >gi|258645453|ref|ZP_05732922.1| exodeoxyribonuclease III [Dialister invisus DSM 15470] gi|260402804|gb|EEW96351.1| exodeoxyribonuclease III [Dialister invisus DSM 15470] Length = 254 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 75/306 (24%), Gaps = 78/306 (25%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + ++ +SWN+N L ++ K LDAD LQE Sbjct: 2 KSLKYISWNVNGLRACMKKGFMQS---------------FKELDADCFCLQETKLQPDQI 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + + S ++ A+ K + + D R Sbjct: 47 ELDLPGYYQYWNSAV-----------KKGYSGTALFTKIKPLSVTYGIGMEEHDQEGR-- 93 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 ++ + ++ + + + + L Sbjct: 94 -------VITADFNDHCLVTCYTPNSQRGLARLTYRMKWEDDFKKYLLDL--------SK 138 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P ++ GD N + + + + F + + Sbjct: 139 KKPVILCGDLNVAHEEIDLANPASNHMNAGFTDDERNKMTELLSDGFTDSFRYLHQDKKD 198 Query: 247 ANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 A IDYF++ + + SDHCP Sbjct: 199 AYSWWSYFAKSRERNIGWRIDYFLVSDILQPRIKAAEIHSSIL-----------GSDHCP 247 Query: 298 ISIDYD 303 + +D + Sbjct: 248 VELDIE 253 >gi|326446445|ref|ZP_08221179.1| hypothetical protein SclaA2_35502 [Streptomyces clavuligerus ATCC 27064] Length = 300 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 86/301 (28%), Gaps = 51/301 (16%) Query: 8 ALVFFLVPCTASV-AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 AL +P A A R+++WNI +++ R Sbjct: 29 ALFARSLPVEAPRDAVPNRVMTWNICN-------PCKESNASR--------AAEIARYAP 73 Query: 67 DIVFLQE--MGSYNAVAKVFPKNTWCIFYSTE----RLINHSKRDSNNDIHTAIAVRKKN 120 ++ LQE + + + +++ + A+ Sbjct: 74 QVIGLQEACVRDVEWIRQYLKSRYGLVYHVEYGTVLQHQGRCGGLPWRPGAFGQALLSAA 133 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 +S + +R + + + G+ + V + HL Sbjct: 134 PMTDHESVEYPDGG-----SEDRGYMAVTTTVGGRSVRVFNTHL-----------AQRRQ 177 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 ++ + Q + L + + + + ++ GDFN N + + ++ P Sbjct: 178 EAVRADQTRVLAAAVARHERA----IVLGDFNAVPNAPELTRIW--ELSADEKSPCGPSS 231 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQ----NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + C + + DY + L S +++ + + +S H Sbjct: 232 A-ADCEPTTDWQL--TFDYIFLRGMAPVEHGVHLTSYSDHHLVHTDVGAPGPTRPVSTHA 288 Query: 297 P 297 P Sbjct: 289 P 289 >gi|301309385|ref|ZP_07215327.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] gi|300832474|gb|EFK63102.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] Length = 304 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 91/331 (27%), Gaps = 55/331 (16%) Query: 2 IRKYVLALVFFLVPCTASVA-----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 +RK L + C A A V++ S+NI L+ G + Sbjct: 1 MRKISEILCCVAILCCALSACSDKPATVKVSSFNI-WLNTLGGKLPP-----------SQ 48 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + + DIV +QE ++ ++ + E + N I Sbjct: 49 TAKVIEASQTDIVGIQE-------GHIYEEDGIKHDHVPEIAESLGFHLFNQGEGHYILS 101 Query: 117 RKKNVRVLQQSY--PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 R V Y + KD F N + + + I + F+D+ E Sbjct: 102 RYPVVDSTASRYGVKIQVGKDKFCWMFNCHLYYI----PYQPYQLNGIPYGDYPFIDTEE 157 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD----------- 223 + ++ + I Q + P + GDFN Sbjct: 158 EAIRFANEARREEVTRYQKDIQQVMKEGYPVFLTGDFNEPSFLDWTQRAADAGIHKIKVE 217 Query: 224 -----FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQE 273 + I NDS ++ S +D+ + + + Sbjct: 218 WPATKAFSEIGMNDSYRTIHPDEVSTPGYTWTPVPSEQEILDRLDFVLYSG----CKVTD 273 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 SF SDH ++ ++F Sbjct: 274 SFITGESETTSDVVVSPYPSDHRMVTSCFNF 304 >gi|288799769|ref|ZP_06405228.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 299 str. F0039] gi|288333017|gb|EFC71496.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 299 str. F0039] Length = 347 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 41/357 (11%), Positives = 97/357 (27%), Gaps = 74/357 (20%) Query: 2 IRKYVLALVFFLVPCTASVAQKVR-----LVSWNINTLSEQEGVSLWKN----------- 45 ++ + A++ L+ + AQK + + +N L + ++ Sbjct: 1 MKYFFFAVIGVLLTFLPASAQK-KYSVYGVGFYNQENLFDTCHDEGKRDYDFLPTGSYKW 59 Query: 46 SVKRTTSDYTLLRQYAKNLDAD--------IVFLQEMGSYNAVAKVFPKNTWCIFYSTER 97 + + + + ++ D I+ L E+ + A+ + + + Sbjct: 60 NAMKYNHKLNNMSRALADMGTDVLPNIGCAIIGLAEVENSKALDDLVAQP---ALSARNY 116 Query: 98 LINHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 H + I A+ V P + S R + + + + Sbjct: 117 QYVHIEGPDRRGIDCALLYNPSLFSVKNTRLVPYVQKLKKDSAFYTRGFLTVSGSLADEH 176 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216 I V+ HL S + Q + +KD + + + GD N Sbjct: 177 IAVIVCHLPSRFSESFYRELGAE-------QVKAIKDSL-LNDDPNCKVFVMGDMNDDP- 227 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK----------NLRNKIPIDYFVMDQNA 266 + + ++ + N + D ++ N Sbjct: 228 ---IDKSMAGILRGKGNIKDVNQGDMYNPWYNILVKEGVGTLLYQGSWNLFDQILVTPNL 284 Query: 267 YKFLIQESFSEILYNEDDIKSRGK-----------------------RLSDHCPISI 300 ++ FS + + ++ I R SDH P+ + Sbjct: 285 LNKDDKKDFSSLKFWKNQIFKRDYLFQTEGKYKGSPKRTTAGGVWLDGYSDHLPVVV 341 >gi|154494949|ref|ZP_02033954.1| hypothetical protein PARMER_03995 [Parabacteroides merdae ATCC 43184] gi|154085499|gb|EDN84544.1| hypothetical protein PARMER_03995 [Parabacteroides merdae ATCC 43184] Length = 650 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 78/315 (24%), Gaps = 70/315 (22%) Query: 1 MIRKYVLALVFFLVPC---------TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT 51 M + LA ++ + + ++S+NI + V+ Sbjct: 29 MKQAVWLAAALMMLLPLGKVYSKERSERENNTLCIMSYNIRNGRGMDDVT---------- 78 Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 D+ + D+V +QE+ S + + + ++ + Sbjct: 79 -DFRRTAAVINKVCPDVVAVQEIDSVTGRSGGKDVLREIAGLTLMHHM-YAPAIDYDGGK 136 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 I + K + + PL G R R + + E C Sbjct: 137 YGIGMLSKEKPLGYRYLPLPG------REEARALLVVEFE-----------KYIYCCTHL 179 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 SL + +Q + PF IAGD N Sbjct: 180 SLTEEDRMLSLPVIRQVAA---------SANKPFFIAGDMNAHPGSEFIRQL-------Q 223 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYF--VMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + K AN IDY I + Sbjct: 224 NDFVILTDTKKPTFPAN---NPDETIDYIAAYAKDTTAFTRISSRVWDEPA--------- 271 Query: 290 KRLSDHCPISIDYDF 304 SDH PI D F Sbjct: 272 --ASDHRPIITDIIF 284 >gi|317013296|gb|ADU83904.1| exodeoxyribonuclease III [Helicobacter pylori Lithuania75] Length = 250 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++DAD+ +QE + + + Sbjct: 1 MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + + D R Sbjct: 42 QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINIEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + ++++++ + S + + + L+ Sbjct: 91 -----VVTCEFESFYLVNVYTPNSQQALSRLSYRISWEVEFKKFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFSELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|317133644|ref|YP_004092958.1| exodeoxyribonuclease III Xth [Ethanoligenens harbinense YUAN-3] gi|315471623|gb|ADU28227.1| exodeoxyribonuclease III Xth [Ethanoligenens harbinense YUAN-3] Length = 256 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 34/299 (11%), Positives = 76/299 (25%), Gaps = 78/299 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + +ADI +QE + A Sbjct: 1 MKLISWNVNGLRACMQKGF---------------ADFFNREEADIFCVQETKMHPEQAD- 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + + F+++ + + AV + + + + R Sbjct: 45 FAFDGYQSFWNSAEKKGY----------SGTAVFTRVPPLSVR----YDMGEPEHTGEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++++++ + + L Sbjct: 91 -----VITVESEAFFLVNVYTPNSQRDLVRLDYRMRWEDAFRAYLLTLNR--------DK 137 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + + F + +A Sbjct: 138 PVVVCGDMNVAHREIDIKNPKSNIHNAGFTPEERQKMTDLLEAGFIDTFRALYPEQKDAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 IDYF++ + + SDHCP+ Sbjct: 198 TWWSYMRKARERNAGWRIDYFLVSDRLRGQVEDSTI-----------YADVPGSDHCPV 245 >gi|269217995|ref|ZP_06161849.1| putative extracellular nuclease [Actinomyces sp. oral taxon 848 str. F0332] gi|269212930|gb|EEZ79270.1| putative extracellular nuclease [Actinomyces sp. oral taxon 848 str. F0332] Length = 897 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 47/345 (13%), Positives = 95/345 (27%), Gaps = 63/345 (18%) Query: 15 PCTASVAQKVRLVSWNINTLSEQ-----------EGVSLWKNSVKR-----------TTS 52 +V V + S+N+ + + R Sbjct: 304 AAPENVGGDVTVSSFNVLNYFTDLGESEAGCKSYDDREGNPVTANRCDVRGAYSKAAFEK 363 Query: 53 DYTLLRQYAKNLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHSK- 103 + LDA +V L+E+ + ++A + + Sbjct: 364 QQQKIVSAIAGLDASVVSLEEIETSSKFGHDRDASLAALVKALNERAGREQWAYVPSPSK 423 Query: 104 -RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR-----RAVELLVEINGKKI 157 S + I A +K V + +S L G K+ A RA++ G+ Sbjct: 424 VPASEDVIRLAFVYQKGKVEPVGESRILTGNKEFTGYAREPMGQEWRALDAAGAPRGEAF 483 Query: 158 WVLDIHLKSFCF-----LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 V+ H KS + + + L + QA+ L W ++ P + GDFN Sbjct: 484 AVVANHFKSKGSLASAYPNDGDPYQGNNNRLRTAQAKALAQWAKEQYG-NRPTFLVGDFN 542 Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 + + ++ + +D+ + + A + + Sbjct: 543 SYSAEDPIL-----ALRDAGYSEVRDSIGRAD-HSYQFGGAVGSLDHVLANDAARRMVAG 596 Query: 273 ESFSEILYNEDDIKSRGK--------------RLSDHCPISIDYD 303 + E + R SDH P+ + + Sbjct: 597 ADVWSVNAMESPAFEYSRNNYNVKQLWDGGPFRSSDHDPVKVGVN 641 >gi|242770047|ref|XP_002341898.1| transcription factor, putative [Talaromyces stipitatus ATCC 10500] gi|218725094|gb|EED24511.1| transcription factor, putative [Talaromyces stipitatus ATCC 10500] Length = 753 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 41/364 (11%), Positives = 92/364 (25%), Gaps = 79/364 (21%) Query: 16 CTASVAQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + + A K ++S+N + + L+ ++ DADI LQE Sbjct: 372 SSQAQADKFTVLSYNTLCDQSATPSHYGYVPSRALAWEFRRDLILNEIRSHDADIACLQE 431 Query: 74 MGS---YNAVAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVL---- 124 + + N + Y + H + + D K + + Sbjct: 432 IDQGNYNEFFREQLAYNDYKGVYWPRGRAMGMHEEEAKSVDGCATFFKASKYILLDKQMI 491 Query: 125 ------QQSYPLLGAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLE 174 + G D ++R + + ++V + G ++ V++ HL + + + Sbjct: 492 NFGQTAVRRPDAKGQDDIYNRLWQKDHIAVVVFLENRLTGTRLIVVNAHL---YWDPAFK 548 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLV------------------------------- 203 + ++L ++ L + + Sbjct: 549 DVKLIQTAILMEEITKLSEKYAKFPPCTDKTAFRFSEAEDGSQENTTPVEPAPSAEYSSG 608 Query: 204 ---PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRC 245 P +I GDFN N + + F + Sbjct: 609 DQIPLLICGDFNSAPGEAAYNLLAHGGLTEAHPDLEKRLYGNLSRVGMTHPFKLKSAYSA 668 Query: 246 -----NANKNLRNKIPIDYFVMDQ-NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N +DY + + + SDH + Sbjct: 669 IGELSFTNYTPDFNSILDYIWYSSTALHVTGLLGEVDKEYLQRVPGFPNYHFPSDHLALL 728 Query: 300 IDYD 303 ++ Sbjct: 729 AEFS 732 >gi|150026268|ref|YP_001297094.1| hypothetical protein FP2237 [Flavobacterium psychrophilum JIP02/86] gi|149772809|emb|CAL44293.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86] Length = 368 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 42/366 (11%), Positives = 88/366 (24%), Gaps = 74/366 (20%) Query: 2 IRKYVLALVFFLVPCTA-SVAQKV---RLVSWNINTLSEQEGVSLWKN----------SV 47 IR + L+ F + A + A+K + +N L + + Sbjct: 3 IRNFFTTLLLFSLTIGANAQAKKFAIHTVAFYNFENLFDTINNPNIDEEWLPNGAQNWTS 62 Query: 48 KRTTSDYTLLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99 K+ L + + + E+ + + + S + I Sbjct: 63 KKYKEKIHNLARVINEIGTGENQKNAPTFIGGAEIENRGVLEDLVKDPQ---LISNDYGI 119 Query: 100 NHSKRDSNNDIHTAIAVRKKNV------------------------RVLQQSYPLLGAKD 135 H I A+ +KK+ ++ Sbjct: 120 VHFDSPDKRGIDVALLYQKKHFQPTSYINIPLLIYKKDTKAKAEKETDEDKADKDKIEIS 179 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 SR R + + ++G +I V+ H S + + + + + + + D I Sbjct: 180 QDSRVYTRDILLVTGLLDGDEINVIVNHWPSRSGGEKKSSPFREAAGRMD---RKIMDSI 236 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN-----DSLIRFPKEKDSRCNANKN 250 K + GD N + + F + + Sbjct: 237 -YKVNPNAKIINMGDLNDGTYNKSVKEGVGAKLKKEEVEKFGVYNPFEEMAKKGNASLFY 295 Query: 251 LRNKIPIDYFVMDQNAYK------FLIQESFSEILYNEDDIKSRGKRL----------SD 294 D ++ Q + + Y SD Sbjct: 296 RDAGDIFDQIMVSQTLIEKDYSSFRYWKAGIYNKPYMITTTGQYKGYPLRHGNNEIGFSD 355 Query: 295 HCPISI 300 H P+ I Sbjct: 356 HFPVYI 361 >gi|59712058|ref|YP_204834.1| nuclease [Vibrio fischeri ES114] gi|59480159|gb|AAW85946.1| nuclease [Vibrio fischeri ES114] Length = 889 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 41/383 (10%), Positives = 95/383 (24%), Gaps = 104/383 (27%) Query: 23 KVRLVSWNINTLSEQ-----EGVSLWKNSVKRTTSDYT----LLRQYAKNLDADIVFLQE 73 + + S+N+ + +N + D+ + +DADI+ L E Sbjct: 484 DLTITSFNVLNYFTSVAAGGDANPTGQNRGATSADDFAIQQAKILSALVAIDADIIGLME 543 Query: 74 MGSYNAVAKVF--------------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 + + ++ + + + ++ I A+ R Sbjct: 544 VENNGFGENSAINDLTTALNAQFEDEEDHYKYVEIKNKDKYQGEYLGSDAIMVALLYRPS 603 Query: 120 NVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEING--KKIWV 159 V++ + + + R ++ I + + V Sbjct: 604 EVKLKGKARVIKTPEQHIAENTITRDNNGTIEFNPAYDKYQRHSLVQKFMIKDAKEPLTV 663 Query: 160 LDIHLKSFCF-----------LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208 + HLKS + A+ + D + K +I Sbjct: 664 VVNHLKSKGSECIEQWQNFEEDKDPSDLQGNCNRFRVSAAKAIGDELESVKGD---VLIL 720 Query: 209 GDFNR-----------KINYLGNNDDFW-----------------------KTIDPNDSL 234 GD N + N D + + + Sbjct: 721 GDMNAYGMEDPLLTLTDYSQEKYNRDIFTASYTTLGTDKDGKPLPYETTGSQVTQGYGYI 780 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291 + + +D+ + +++ K + + I E ++ + Sbjct: 781 NLNTLLHGTDTFSYTYSGELGNLDHALANKSLAKRVAEIEDWHINAAESNLFEYSPKYTG 840 Query: 292 ----------LSDHCPISIDYDF 304 SDH PI I D+ Sbjct: 841 DMVKYNDMYSASDHDPIVITLDY 863 >gi|71909379|ref|YP_286966.1| endonuclease/exonuclease/phosphatase [Dechloromonas aromatica RCB] gi|71849000|gb|AAZ48496.1| Endonuclease/exonuclease/phosphatase [Dechloromonas aromatica RCB] Length = 252 Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 37/284 (13%), Positives = 80/284 (28%), Gaps = 49/284 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS----YN 78 + + ++NI+ Q + LR+ ++L+ DIVFLQE+ + Sbjct: 5 TLHITTFNIHKGFSQFNRRMM----------VHELRERLRHLNPDIVFLQEVQGLHLGHA 54 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRD--SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 +P + F + + + + + H A+ + + + + + Sbjct: 55 ENHDDWPDSPQHEFLAEDVWASCAYGQNMIYDHGHHGNAILSRLPILHSHNQDVTHLQF- 113 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R + +E+ S +Q L ++ Sbjct: 114 ----EKRGLLHCQIELPEGPAAHCVCVHLSLFG------------YSRRKQMDALATYLD 157 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + + P +IAGDFN N G + + + + + Sbjct: 158 KTADPTAPLIIAGDFNDWGNRAGEH--MARRLGLREVFSGPSGN---PARSFPAAMPMFR 212 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +D + F +SDH +S Sbjct: 213 LDRIYVRG----------FDVKRTEVHHGLP-WSNISDHAALSA 245 >gi|260909404|ref|ZP_05916112.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 472 str. F0295] gi|260636496|gb|EEX54478.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 472 str. F0295] Length = 249 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 34/302 (11%), Positives = 80/302 (26%), Gaps = 77/302 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L G K+LDAD LQE A Sbjct: 1 MKFISWNVNGLRAVVGKDFE---------------NIFKSLDADFFCLQETK-MQAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + F++ ++ ++ A+ ++ + + D R Sbjct: 45 LQFDGYESFWN----------YADKKGYSGTAIYTRHKPLNVTYGIGIDQHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + Q + ++ + Sbjct: 91 -----VITLEMPTFFLVTVYTPN-------SQDELRRLDYRMQWEDDFQAYL-HDLDKRK 137 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249 P ++ GD N + + + + K Sbjct: 138 PVIVCGDMNVAHQEIDLKNPKTNRRNAGFTDEERQKMTQLLGAGFTDTFRWKYPEEITYS 197 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF++ ++ + SDHCP+ + Sbjct: 198 WWSYRFKARERNTGWRIDYFLVSDRLQSEVLDAKIHTDIL-----------GSDHCPVEL 246 Query: 301 DY 302 + Sbjct: 247 EL 248 >gi|240281901|gb|EER45404.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Ajellomyces capsulatus H143] Length = 675 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 39/358 (10%), Positives = 89/358 (24%), Gaps = 75/358 (20%) Query: 22 QKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +K +S+N + + + L+ K +ADIV LQE+ + Sbjct: 290 EKFTALSYNTLCDRSATHQQHGYAPSRALAWEYRRDLILNEIKGYNADIVCLQEIDQGSY 349 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL--- 131 + + + ++ + K + + + Sbjct: 350 HGFFREQLAYNDYKGVYWPKGRAQGMPEEEAKVVDGCATFFKGSKYILLEKNMIHFGQTA 409 Query: 132 -------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 G D ++R + + ++ ++G+++ V+++HL ++ + Sbjct: 410 VRRPDAKGQDDIYNRLWQKDNIAVVTYLENRLSGERLIVVNVHLYWDPAYKDVKLIQAAI 469 Query: 181 CSLLSQQAQWLKDWITQKKESLV---------------------------------PFVI 207 Q I + P +I Sbjct: 470 LMEEVTQLAEKYSKIPACTDKTAFRFSEPEHSTDGGGTATPVEPAPSVEYSSGSHIPLII 529 Query: 208 AGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NA 247 GDFN ++ + + F + Sbjct: 530 CGDFNSYPGSAVHELMSRGRLIEDHPDLEKRLYGNLSRVGMSYPFNLKSAYGAIGELDFT 589 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISIDYDF 304 N IDY +A + + Y + SDH + ++ F Sbjct: 590 NYTPDFADVIDYIWYTSSALQVTGLLGAVDKEYLQRVPGFPNYHFPSDHLALMAEFSF 647 >gi|212697551|ref|ZP_03305679.1| hypothetical protein ANHYDRO_02124 [Anaerococcus hydrogenalis DSM 7454] gi|212675454|gb|EEB35061.1| hypothetical protein ANHYDRO_02124 [Anaerococcus hydrogenalis DSM 7454] Length = 275 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 83/305 (27%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++SWNI++L+ + + R + DADI+ LQE Sbjct: 1 MKIISWNIDSLNAALTSDSNRAKMSRD------VLDTIIKEDADIICLQETKLPRTGPSK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 K ++ S ++ + K SYP L A D+ + Sbjct: 55 KHKEILESYFPQYNYAWISSQEPARKSYAGCLTFYKKEFEPIISYPTLDAPDTMDQE--- 111 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 L+ + + ++ ++ + S + + + L Sbjct: 112 ---ARLITLEFENFYLTQVYTPNAGSGLSRLDLRQVWDKKYANYLEKLDQ--------NK 160 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GDFN + + + F Sbjct: 161 PVIACGDFNVAHKEIDLKHPENNHKSAGFTDEERSGFTNLLNKGFVDTFRYLHGDVEGKY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF++ + + + + + DH PI Sbjct: 221 TWWAQRVKTSKINNSGWRIDYFIVSDRIKEKIKESDMIDSGDRQ-----------DHTPI 269 Query: 299 SIDYD 303 I+ D Sbjct: 270 YINMD 274 >gi|148886652|ref|NP_001092156.1| tyrosyl-DNA phosphodiesterase 2 [Xenopus laevis] gi|281312450|sp|A5D8M0|TYDP2_XENLA RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase; AltName: Full=TRAF and TNF receptor-associated protein homolog gi|146327082|gb|AAI41729.1| LOC100049743 protein [Xenopus laevis] Length = 371 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 41/286 (14%), Positives = 85/286 (29%), Gaps = 46/286 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++WNI+ L E + D+VFLQE+ Sbjct: 123 FTFLTWNIDGLDESN-----------VAERARAVCSCLALYTPDVVFLQEV--------- 162 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 +C + + + ++ TA+ ++K V+++ Q + R Sbjct: 163 --IPPYCEYLKKRAVSYKIITGNEDEYFTAMMLKKSRVKLISQEIVPYPST-----LMMR 215 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + V I+G I ++ HL+S +Q + + Sbjct: 216 NLLVANVNISGNSICLMTSHLEST----------KDHSKERLKQLDTVLKKMMD-APPSA 264 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI------RFPKEKDSRCNANKNLRNKIPI 257 + GD N + + TI + R+ + N +++ Sbjct: 265 TVIFGGDTNLRDQEVAKIGGLPNTILDVWEFLGKPEHCRYTWDTKLNNNLRACYTSRLRF 324 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + + + F + + G+ SDH + D+D Sbjct: 325 DRILYRASMEGSQVIPQF--LNLVGTEKLDCGRFPSDHWGLLCDFD 368 >gi|121703439|ref|XP_001269984.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus clavatus NRRL 1] gi|119398127|gb|EAW08558.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus clavatus NRRL 1] Length = 439 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 90/311 (28%), Gaps = 31/311 (9%) Query: 3 RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 + L+ L A++ + +++ N+ L + T + L+ + Sbjct: 1 MRSTYFLLAGLPSALAAIGGEFNVLTLNVAGLPPIFNGNDVPGDK---TENSRLIGKKFA 57 Query: 63 NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 D++ +QE +Y+A + + S I +N A R K Sbjct: 58 EYGYDVIHVQEDFNYHAAIYETDNHPYRTPTSGGAAIGSGLNTLSNFEFLNFA-RTKWAT 116 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 S F+ R A G + ++H + + + Sbjct: 117 CSNASGADCLTPKGFTSMRVRVA-------EGVYVDFYNMHTDAGS--------KTEDVA 161 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI----RFP 238 Q + D+I V+ GD N + G ++T + + Sbjct: 162 ARGANLQQVADYIRTY-SVGNAVVVFGDTNARYTSSGEKIRVFQTENGMTNPWVQLVLNG 220 Query: 239 KEKDSRCNA-----NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 E + + +D + L ++ + G LS Sbjct: 221 DEPKEGTDPLLCENPSTVNTCETVDKIFYRGSRAIDLQATFWNYESSK--FLSESGTILS 278 Query: 294 DHCPISIDYDF 304 DH P++ ++ + Sbjct: 279 DHNPVTSNFTW 289 >gi|15823783|dbj|BAB69072.1| sphingomyelinase [Pseudomonas sp. TK4] Length = 516 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 40/327 (12%), Positives = 86/327 (26%), Gaps = 45/327 (13%) Query: 8 ALVFFLVPCTASVA-----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 AL+ FL A A L++ N L+ + + + + Y + Sbjct: 10 ALLAFLAATQAQAAPDPRPDAYNLLTHNAFFLTP---LPFKFSWSNQDRARLMTRADYLE 66 Query: 63 NLDADIVFLQEMGSYNAVAKVFPKNTWCIFY-------STERLINHSKRDSNNDIHTAIA 115 D++ E+ A + + S+ + + N +A Sbjct: 67 ER--DLIIFNELFDNAASDILLNGLKDRYPHQTPVLGRSSAGWDATTGNPAANLDDGGVA 124 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + + + Y L R N+ V + V + V+ H ++ DS Sbjct: 125 IVSRWPIARRVQY-LYHDACGADRLANKGFVYVKVLRGERPFHVIATHTQA---ADSACP 180 Query: 176 TYSPSCSLLSQQAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKT------I 228 + Q + ++ +I + + I GD N + Sbjct: 181 DGGRAV--RESQFREMRAFIDRENIPANEVLFIGGDLNVIRGSDEYPHMLAQLDLREPDS 238 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQES----- 274 S + N +DY ++ + + Sbjct: 239 YAGASATFDTRRNGVTGYQYPYKDNGPGKAPSNPPEYLDYILVSNRHGQVSYWHNQALDI 298 Query: 275 -FSEILYNEDDIKSRGKRLSDHCPISI 300 ++ + SDH P++ Sbjct: 299 PSPRWSASDGVNTWYYQDYSDHYPVAA 325 >gi|260775755|ref|ZP_05884651.1| deoxyribonuclease I-like 2 precursor (DNase I-like 2) [Vibrio coralliilyticus ATCC BAA-450] gi|260608171|gb|EEX34340.1| deoxyribonuclease I-like 2 precursor (DNase I-like 2) [Vibrio coralliilyticus ATCC BAA-450] Length = 294 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 32/286 (11%), Positives = 85/286 (29%), Gaps = 35/286 (12%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--Y 77 + ++SWNI S + ++ D++ +QE+ Sbjct: 40 APDGLHVISWNIQVFGR---------SKASKPQVMAHIVATLQHY--DLIAIQEIRDKSQ 88 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A+ ++ ++ ++ S + A R + L+ D Sbjct: 89 TAIQQLLEALNNASQHTYTMIVGERLGRSASKEQYAYVYRVDVLTPLR-----FYTSDDP 143 Query: 138 SRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 +R + + ++ +++ + E + QA ++D Sbjct: 144 DDVFHREPLVAHFQCPACVSPNLIVVNVHTDPDEAHEEVDALSDVVTTAIQASAIQD--- 200 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 ++ GD N Y+ ++ + + + + D+ Sbjct: 201 --------VLVLGDLNADCGYMNQHERETSPLFGDGFTMLIGDDVDTTTGKTH-----CA 247 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D V+ + + + D +++ K +SDH P+++ Sbjct: 248 YDRLVVTNSLVPRIEHARVVAFDDDLDLDEAQTKAVSDHYPVALTL 293 >gi|150006466|ref|YP_001301210.1| hypothetical protein BVU_3985 [Bacteroides vulgatus ATCC 8482] gi|254881617|ref|ZP_05254327.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|294777013|ref|ZP_06742471.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus PC510] gi|319643001|ref|ZP_07997635.1| hypothetical protein HMPREF9011_03236 [Bacteroides sp. 3_1_40A] gi|149934890|gb|ABR41588.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] gi|254834410|gb|EET14719.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|294449071|gb|EFG17613.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus PC510] gi|317385366|gb|EFV66311.1| hypothetical protein HMPREF9011_03236 [Bacteroides sp. 3_1_40A] Length = 353 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 34/311 (10%), Positives = 87/311 (27%), Gaps = 78/311 (25%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + ++++V++N+++ + + + D++ QE Sbjct: 94 PTKYANENRLKVVTYNVHSFGNEITGFS-----------AKEFAEMMNKEETDVLCFQEY 142 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + +NT+ + S + A+ + Q+ Sbjct: 143 RGNGDFTEQDLQNTYAKIF----------PYSFIPEGLSQAIYSRYPIRQSQTIEFPNTN 192 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD----------------------S 172 + A+ +++ G I ++++H+++ F Sbjct: 193 N--------GAIWADLDVKGMTIRIINVHMQTTSFDRMRSKAAQARGEQDEEQERGIYLG 244 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 + + + + QA+ + I + P ++ GDFN + + Sbjct: 245 YSDNFRENTVRRAGQAEQISSLINATE---YPLIVCGDFNDPPG-TFTYETLKNGLKDG- 299 Query: 233 SLIRFPKEKDSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + IDY L + I Y+ Sbjct: 300 ------FQTAGEGYGATYRGFHHLLRIDYLFHS----TLLEGIKYKVIPYD--------- 340 Query: 291 RLSDHCPISID 301 +SDH P+ ++ Sbjct: 341 -MSDHNPVYLE 350 >gi|17862022|gb|AAL39488.1| LD05405p [Drosophila melanogaster] Length = 526 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 38/336 (11%), Positives = 85/336 (25%), Gaps = 46/336 (13%) Query: 14 VPCTASVAQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 + S + ++R+VS+N+ + S + L ++ Sbjct: 189 TTNSLSESNEIRVVSYNLLADLYASSDYAGSTLFSYCPAKYLQIDYRKPLFINEIIGYNS 248 Query: 67 DIVFLQEMGSY---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 DI+ LQE+ + ++ + + ++ + ++ + + Sbjct: 249 DILCLQEVDQRIFDFDLKEILEQPPYNYHGIMAPKGKCAEGVAIFFRNSRFDLLDSQILH 308 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELL-------------VEINGKKIWVLDIHLKSFCFL 170 L + P L +S A + I G +VL + + Sbjct: 309 LGSNIPALPVFESLWNKIKVNAQLAERICERSTTLQTCLLRIKGTDNYVLVANTHLYFHP 368 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQK---KESLVPFVIAGDFNRKINYLGNNDDFWKT 227 D+ + Q + I + + GDFN G + Sbjct: 369 DADHIRLLQMGFSMLFVEQSISKAIKDFNISSHKNIGLIFCGDFNSVP-ECGIYKLMTEQ 427 Query: 228 IDPNDSLIRFPKE------------------KDSRCNANKNLRNKIPIDYFVMDQNAYKF 269 + + + +DY + ++ Sbjct: 428 LAEKTLEDWQSNAEQAVSNVELAQPFKMASAYGAPEYTHYTTLFAGCLDYVFYQNDRFEV 487 Query: 270 LIQESF-SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 L +E + SDH + D F Sbjct: 488 LKVVPLPTEEELKANTAIPSAVFPSDHVALVADLKF 523 >gi|221474789|ref|NP_723735.2| CG31759, isoform C [Drosophila melanogaster] gi|221474791|ref|NP_723736.2| CG31759, isoform D [Drosophila melanogaster] gi|220902023|gb|AAN10808.2| CG31759, isoform C [Drosophila melanogaster] gi|220902024|gb|AAN10809.2| CG31759, isoform D [Drosophila melanogaster] Length = 564 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 38/336 (11%), Positives = 85/336 (25%), Gaps = 46/336 (13%) Query: 14 VPCTASVAQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 + S + ++R+VS+N+ + S + L ++ Sbjct: 227 TTNSLSESNEIRVVSYNLLADLYASSDYAGSTLFSYCPAKYLQIDYRKPLFINEIIGYNS 286 Query: 67 DIVFLQEMGSY---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 DI+ LQE+ + ++ + + ++ + ++ + + Sbjct: 287 DILCLQEVDQRIFDFDLKEILEQPPYNYHGIMAPKGKCAEGVAIFFRNSRFDLLDSQILH 346 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELL-------------VEINGKKIWVLDIHLKSFCFL 170 L + P L +S A + I G +VL + + Sbjct: 347 LGSNIPALPVFESLWNKIKVNAQLAERICERSTTLQTCLLRIKGTDNYVLVANTHLYFHP 406 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQK---KESLVPFVIAGDFNRKINYLGNNDDFWKT 227 D+ + Q + I + + GDFN G + Sbjct: 407 DADHIRLLQMGFSMLFVEQSISKAIKDFNISSHKNIGLIFCGDFNSVP-ECGIYKLMTEQ 465 Query: 228 IDPNDSLIRFPKE------------------KDSRCNANKNLRNKIPIDYFVMDQNAYKF 269 + + + +DY + ++ Sbjct: 466 LAEKTLEDWQSNAEQAVSNVELAQPFKMASAYGAPEYTHYTTLFAGCLDYVFYQNDRFEV 525 Query: 270 LIQESF-SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 L +E + SDH + D F Sbjct: 526 LKVVPLPTEEELKANTAIPSAVFPSDHVALVADLKF 561 >gi|262037338|ref|ZP_06010804.1| endonuclease/exonuclease/phosphatase [Leptotrichia goodfellowii F0264] gi|261748641|gb|EEY36014.1| endonuclease/exonuclease/phosphatase [Leptotrichia goodfellowii F0264] Length = 249 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 37/290 (12%), Positives = 87/290 (30%), Gaps = 59/290 (20%) Query: 24 VRLVSWNINTLSEQ---EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----- 75 ++ + +NI + + + + + + + S + + ++ K + DIV L E+ Sbjct: 1 MKFLLYNIRYGTGKYLKQPLKHIRGYLGHSLSHVSRIGEFIKGYNPDIVGLVEVDLGSFR 60 Query: 76 --SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 N + + + N A+ K ++ + L Sbjct: 61 TEEKNQAELLGKITGNHCVFQYKYQKNSRYMKVPMVRKQGNALLSKTEIKSKKFHYLNNG 120 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + + +E + ++++ + L +Q L+ Sbjct: 121 MKK---------LVMEIETDSVTVFLVHLAL---------------GGKTRLKQIVQLRK 156 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 I ++ PF++AGDFN + I+ R + Sbjct: 157 LIQDCRK---PFIVAGDFNVL--------WGNEEIELFLEASGLHNVNVHREPTFPSWAP 205 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K +D+ + + + LSDH P+ ID++ Sbjct: 206 KKELDFILCSKE---------IKVKEFQVIKTL-----LSDHLPVIIDFE 241 >gi|170588391|ref|XP_001898957.1| CCR4 [Brugia malayi] gi|158593170|gb|EDP31765.1| CCR4, putative [Brugia malayi] Length = 625 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 45/351 (12%), Positives = 92/351 (26%), Gaps = 74/351 (21%) Query: 23 KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++ +N+ + + S + + + ++ +ADI+ LQE+ + Sbjct: 248 TFTVLCYNVLCDKYATNSLYSYCPSWALNWEYRKAAILKEIRHYEADIITLQEVETEQFR 307 Query: 81 AKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRKKNVRVLQQSYPL------ 130 P+ + + + + AI + + ++ Sbjct: 308 CLFQPELEQIGYAGIFSPKSRAKTMGEEERKFVDGCAIFWKYDKFELEKEHLIEFTQVAI 367 Query: 131 ---LGAKDSFSRAGNR--RAVELLVEIN---------------------GKKIWVLDIHL 164 ++ +R + A+ + +I G + V H+ Sbjct: 368 KKAPTSEKILNRVMPKDNIALCAVFKIRENVYANQPAGQMTMAPSDNVVGNPLVVSTAHI 427 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK---ESLVPFVIAGDFNRKINY---- 217 + +L Q+ L D I+++ +P +I GD N Sbjct: 428 HW---DPEFCDVKLIQSMMLVQEINTLLDEISERYRITPHQIPVLICGDLNSLPESGVVE 484 Query: 218 ---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------NANKNLRNK 254 D +D + C N L K Sbjct: 485 FLSKGAISREHPDLKEFRQDPCITRFSASDDPTVYTHGLRLDCAVDPNSMPFTNYTLEFK 544 Query: 255 IPIDYFVMDQNAYKF---LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IDY + L S +L N+ SDH PI + Sbjct: 545 GVIDYIFSTPQSLARLGVLGPLSMEWVLANKIIGFPHAHVPSDHVPIMAQF 595 >gi|239813296|ref|YP_002942206.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110] gi|239799873|gb|ACS16940.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110] Length = 267 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 81/311 (26%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +L S N+N L + + + L D + +QE+ Sbjct: 2 FKLTSLNLNGLRS---------------AATKGVADWVAELAPDCICMQEIR-------- 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + A+ ++ ++G D+ A R Sbjct: 39 VQASDIEGRFEEMAGLKGHFHFAEKKGYAGTAIYTRHAPSAV----VVGWGDAEFDAEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +EL + +K+ ++ + S + + L + Sbjct: 95 Y-LELRFDTPRRKLSIISCYFPSGSSGEERQEAKFRFLKGFFPHLTAL--------KKER 145 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDS----LIRFPKEKDS 243 F++ GD N + +D + + K Sbjct: 146 EFILCGDINIAHKEIDLKNWRGNQKNSGFLPEERAWMTRLLDAGADGAGLVDVYRLLKPD 205 Query: 244 RCN-ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 A N+ +DY + E + + S Sbjct: 206 TTGEAYTWWSNRGQAYANNVGWRLDYHLATPALGALARSEQI-----------YKTIKFS 254 Query: 294 DHCPISIDYDF 304 DH PI++DYDF Sbjct: 255 DHAPITVDYDF 265 >gi|310826147|ref|YP_003958504.1| exodeoxyribonuclease III [Eubacterium limosum KIST612] gi|308737881|gb|ADO35541.1| exodeoxyribonuclease III [Eubacterium limosum KIST612] Length = 254 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 72/305 (23%), Gaps = 79/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81 ++L SWN+N + ++ + DI+ LQE+ + Sbjct: 1 MKLYSWNVNGIRAVAQKGF---------------TEWVEAAQPDILCLQEVKAAEDQISE 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + F+ +S P+ Sbjct: 46 DIRCIPGYHSFFHAAERKGYSGTAVYYKEE-----------------PISITTGLSEDRF 88 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 N +++E + + +I+ + D + Sbjct: 89 NHEGRTIIMEYP--EFTLFNIYFPNGQKDDER-------LQFKMDFYDCFLKDVNALVAQ 139 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 +I GD N L ++ N + + Sbjct: 140 GKKVIICGDVNTAHTEMDLKNPKSNAKRSGFLPMEREWLDHFFENGYVDTYRHLH-PDTV 198 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDYF + NA + + + SDHCP Sbjct: 199 EYSWWSYRFNARANNAGWRIDYFFVSDNAIDMVKDAAIHTEVT-----------GSDHCP 247 Query: 298 ISIDY 302 +SI+ Sbjct: 248 VSIEI 252 >gi|220911966|ref|YP_002487275.1| exodeoxyribonuclease III Xth [Arthrobacter chlorophenolicus A6] gi|219858844|gb|ACL39186.1| exodeoxyribonuclease III Xth [Arthrobacter chlorophenolicus A6] Length = 277 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 35/313 (11%), Positives = 79/313 (25%), Gaps = 65/313 (20%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 +A +R+ S N+N L + + + D DI+ LQE+ Sbjct: 2 SSALKKDHLRIASVNVNGLRAAYKNG---------------MAAWLEPRDVDILCLQEVR 46 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + +A+ + W I ++ +A+ + + ++ Sbjct: 47 APDAIVRQLLGEGWHILHAEAEAKG----------RAGVAIASREEPIATRNGIGDDYFA 96 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + R ++ V ++ S ++ + + Sbjct: 97 TAGRWVEADFRVTDASGERVQLTVASAYVHSGEVDTPKQDDKYR-------FLDAMSTRL 149 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPK 239 + + ++ GD N L + F + + + + Sbjct: 150 PELSKHSDHALVVGDLNVAHTPLDIRNWKGNLKKAGFLPDERAYFDRFLGEDIGWHDVHR 209 Query: 240 EKDSRC-NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + IDY + D + Sbjct: 210 TMSGEMDGPYTWWSWRGKAFDNDAGWRIDYHLATPALAASATSA-------VVDRAATYD 262 Query: 290 KRLSDHCPISIDY 302 R SDH P+ +DY Sbjct: 263 TRFSDHAPLVVDY 275 >gi|253751487|ref|YP_003024628.1| exodeoxyribonuclease [Streptococcus suis SC84] gi|253753388|ref|YP_003026529.1| exodeoxyribonuclease [Streptococcus suis P1/7] gi|253755783|ref|YP_003028923.1| exodeoxyribonuclease [Streptococcus suis BM407] gi|251815776|emb|CAZ51378.1| exodeoxyribonuclease [Streptococcus suis SC84] gi|251818247|emb|CAZ56055.1| exodeoxyribonuclease [Streptococcus suis BM407] gi|251819634|emb|CAR45379.1| exodeoxyribonuclease [Streptococcus suis P1/7] gi|292558119|gb|ADE31120.1| exodeoxyribonuclease III [Streptococcus suis GZ1] gi|319757905|gb|ADV69847.1| exodeoxyribonuclease [Streptococcus suis JS14] Length = 275 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 82/306 (26%), Gaps = 56/306 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + R + DADI+ +QE + Sbjct: 1 MKLISWNIDSLNAALTAESPRALLSR------AVIDTLVTEDADIIAIQETKLSDKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ S + + KN ++P +GA + G Sbjct: 55 KHLEILESYFPGYANTWRSSVEPARKGYAGTLFLYKNHLTPTITFPEIGAPTTMDSEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V ++ + + L +S Sbjct: 114 -----IITLEFDDFYVTQVYTPNAGDGLKRLADRQIWDVQYADYLAKL--------DSHK 160 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N + + + F NA Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRQSPGFTDEERQGFTNLLAKGFTDTFRHLHGDVLNAY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY+++ + + + + DH PI Sbjct: 221 TWWAQRSRTSKINNTGWRIDYWLVSDRIADKVSKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYDF 304 ++ F Sbjct: 270 VMEISF 275 >gi|32475225|ref|NP_868219.1| exodeoxyribonuclease [Rhodopirellula baltica SH 1] gi|32445766|emb|CAD78497.1| exodeoxyribonuclease [Rhodopirellula baltica SH 1] Length = 256 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 27/305 (8%), Positives = 76/305 (24%), Gaps = 74/305 (24%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + ++L+SWN+N + R++ ++ D++ LQE + Sbjct: 3 ETLKLISWNVNGIRASMDKGF---------------REFVESEQPDVLCLQETKAEPEQV 47 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + ++ ++ + + + D+ R Sbjct: 48 DLSWADELGYHQVWNTATKRG--------YSGVSTWSRVEPLKVTKGLSIEEHDNEGR-- 97 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 ++ +++++ + + + + L Sbjct: 98 -------VLTTTFDDFHLVNVYTPNSQRGLARLDYRMQWDEAFLDYVKKLNRR------- 143 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNA 247 P + GD N + + + I ++ Sbjct: 144 -KPVLFCGDVNCAHKEIDLANPKANRKNAGFSDQERAGLDAVTEAGFIDSFRQFHDGPGH 202 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +DYF + +N + + + SDHCP+ Sbjct: 203 YSWWTYRSDARARNIGWRLDYFWVAKNFWDRVADARIRCEI-----------HGSDHCPV 251 Query: 299 SIDYD 303 + Sbjct: 252 ELTLT 256 >gi|116203121|ref|XP_001227372.1| hypothetical protein CHGG_09445 [Chaetomium globosum CBS 148.51] gi|88177963|gb|EAQ85431.1| hypothetical protein CHGG_09445 [Chaetomium globosum CBS 148.51] Length = 654 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 42/343 (12%), Positives = 88/343 (25%), Gaps = 72/343 (20%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQE 73 + + + S+N+ L+ T++ + + + D++F+QE Sbjct: 289 VSQGKCKALTFGSYNVENLAP-------------TSAHLPKVAGHIVDYLKTPDLMFIQE 335 Query: 74 MGSYNA------------VAKVFPK-----NTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + + + + N F E + N +I A Sbjct: 336 VQDDSGPTDDGVVTANATLTALVGAVKSLSNVTYAFAEVEPVSNEDGGQPGGNIRVAYIY 395 Query: 117 RKKNVRV---------------------------LQQSYPLLGAKDSFSRAGNRRAVELL 149 R + V + + P + + +R+ + Sbjct: 396 RPEIVSLYKPNQGGANDATEVVAQGKGNNSQSAPVLSFNPGRIDPANAAWKASRKPLAAA 455 Query: 150 VEING--KKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKK--ES 201 G K + +++H S SL P + QA +I + + Sbjct: 456 WMAKGSKKPFYTVNVHWSSKGGGTSLHGDRRPPINGAVDARMAQANVTGSFIAEILALDP 515 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 + AGDFN + I L K N +D+ Sbjct: 516 AAKVIAAGDFNEFAFVQPMK--TFSAISGMVDLDEAAKLPIEERYTYAYDMNAQALDHMY 573 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + +SDH ++F Sbjct: 574 VSPALAHSKTTRFEHIH---VNSWAAFDDVVSDHDASIALFNF 613 >gi|289665987|ref|ZP_06487568.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289670449|ref|ZP_06491524.1| exodeoxyribonuclease III [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 329 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 35/296 (11%), Positives = 74/296 (25%), Gaps = 70/296 (23%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 ++ ++N+N TS + L ++ + DIV LQE+ S A Sbjct: 7 KIATFNVNG----------------ITSRLSHLLEWLQREQPDIVGLQELKSTQAA---- 46 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 R + +A+ + ++ L Sbjct: 47 ------FPEQAIRDAGYGVIWQGEKSWNGVALLARGTEPVEIRRGLPWDPGDTQSRYLEA 100 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 A+ + V ++L + + Y + + L + P Sbjct: 101 AIH--------GVVVACLYLPNGNPQPGPKFDYKLA------WFERLIRHAKTLVDLPHP 146 Query: 205 FVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNANK 249 + GDFN D ++T+ + Sbjct: 147 VALIGDFNVVPTDADIYDPKGWRKDALLQPESRAAYQTLLAQGWTDSLLAMHGATPIYTF 206 Query: 250 NLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ ++++ L + ++ SDH P Sbjct: 207 WDYFRQHFARDRGLRIDHLLLNRKLAPGLQDAGV-------NKWVRALEKASDHAP 255 >gi|254512323|ref|ZP_05124390.1| endonuclease/exonuclease/phosphatase [Rhodobacteraceae bacterium KLH11] gi|221536034|gb|EEE39022.1| endonuclease/exonuclease/phosphatase [Rhodobacteraceae bacterium KLH11] Length = 336 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 45/350 (12%), Positives = 91/350 (26%), Gaps = 65/350 (18%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 MIR VL L+ A+ A +R+ S+N + G+ L ++R + Q Sbjct: 1 MIRALVLLLL-----PFAAQADTLRIASFNTELSRKGPGLLLRD--IQRDDPQVEAVVQV 53 Query: 61 AKNLDADIVFLQEMG------SYNAVAKVFPKNTWCIFYSTERLINHS------------ 102 DIV LQ + + A + ++ +S N Sbjct: 54 LAATRPDIVALQGIDWDLDGLTLAAFTRRLSESGLSYPFSFTAQPNSGLETTLDLDGDGK 113 Query: 103 -------KRDSNNDIHTAIAVRKKNVR----------VLQQSYPLLGAKDSFSRAGNRRA 145 + +AV + +L + P + Sbjct: 114 TGGPGDAQGWGAFSGQNGLAVLSRYPVKVDQARSFSGMLWRDLPGATLPTEGGKPFPSAI 173 Query: 146 V------------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + +E G + ++ H F + + + + L Sbjct: 174 AQAAQRLSSTAHWVIPIEAPGGPVNLMTFHASPPVFDGPEDRNGLRNRDEIRLWSLLLNG 233 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 + + FVIAGD N+ + + + Sbjct: 234 ALGPALST--RFVIAGDANQDPAQGEGHKSAISELLEH---PLVQDPFPRNTATVLWKGV 288 Query: 254 KI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +DY + + L + + + + S H + +D Sbjct: 289 GEMRVDYIL--PSVGWELRDAGV---YWPDQPERKIAETASRHRLVWVDL 333 >gi|330952069|gb|EGH52329.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae Cit 7] Length = 291 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 36/292 (12%), Positives = 80/292 (27%), Gaps = 58/292 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 ++RL+S+NI + + + + + D+V L Sbjct: 30 PEDGRLRLLSFNIQVGISTQRYHHYLTRSWQHLLPHGGRAGNLQKIGDLINEF--DLVAL 87 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE+ + + + R+ + V + + +PL Sbjct: 88 QEVDGGSMRSGFINQVEHLAQLGGFPYWYQQLNRNLGRLAQHSNGVLSRLRPTKIEDHPL 147 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G R A+ + + V+ +HL ++Q + Sbjct: 148 PGPAG-------RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQLAY 187 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 +++ I V+ GD N N L + + + Sbjct: 188 IRELIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 233 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + +D+ ++ +Q I SDH P++++ Sbjct: 234 WRPQRCLDHILLSPTLTLERVQVLAQPI--------------SDHLPVAVEI 271 >gi|300774457|ref|ZP_07084320.1| AP endonuclease domain protein [Chryseobacterium gleum ATCC 35910] gi|300506272|gb|EFK37407.1| AP endonuclease domain protein [Chryseobacterium gleum ATCC 35910] Length = 261 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 81/295 (27%), Gaps = 76/295 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++VS+N Y K+ DAD+ LQE Sbjct: 25 DIKVVSFNTRAGGRGNEGVGP----------------YLKSQDADVFLLQE--------- 59 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + H + + + K+ + QQ D Sbjct: 60 ------------DAGIKYHFDGYQKANPGGGLTILTKHKIIKQQII------DPQDEDVR 101 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSL--------------ENTYSPSCSLLSQQA 188 V +EI G+ +D++L F F + ++ + Sbjct: 102 IPGVLADIEIKGRTYRFIDVYLNPFRFEKDMVKLNGDTDTDEQKIKDVIKRLIPTFKKHQ 161 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + + S P ++AGDFN N + K S + Sbjct: 162 DQVALIREAIENSPYPVILAGDFNSVPNSYEYY-----HLSDGLEDTFLTAGKGSAT-SF 215 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + I IDY ++ I Y D S +SDH P+ + + Sbjct: 216 HDYKFPIRIDYVFSSKSLKA---------ISYKVDRSVS----ISDHYPVIVKFS 257 >gi|254475984|ref|ZP_05089370.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria sp. R11] gi|214030227|gb|EEB71062.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria sp. R11] Length = 271 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 29/296 (9%), Positives = 72/296 (24%), Gaps = 48/296 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L ++NI + D + ADI+ LQE+ + ++ Sbjct: 2 IKLATYNIQYCMGLD-----------EKIDPDRIADAVG--GADILALQEVDRFWERSED 48 Query: 84 FPK-----NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + + + + + ++ PL Sbjct: 49 QDQVEELTRRLPHVHHVFAPGIDVHHPRLGRRQHGLMILSRWPILSHRTMPLPMRPHPDL 108 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI--- 195 G E ++ + + + H ++L + + + +QA Sbjct: 109 FVGQSLLQEAVIATPEGVLRLYNTHFNYG--DEALIAEQAAFSAAVMRQALQAGGVWGGG 166 Query: 196 ---------TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 V+ GD N + S Sbjct: 167 NVERDKSNGDDAPPMPETTVLVGDLNVGPTSDAYRILMRSGLVDPW-----VSLGQSEEG 221 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + +D+ + ++ I + SDH P+ + + Sbjct: 222 VTSSHLDDKRLDHVLCTED-----------CISDDAQMWIDTTAVGSDHMPVWLQF 266 >gi|293339924|ref|XP_002724703.1| PREDICTED: rCG35247-like isoform 2 [Rattus norvegicus] gi|293351343|ref|XP_001057412.2| PREDICTED: rCG35247-like isoform 1 [Rattus norvegicus] Length = 340 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 42/287 (14%), Positives = 86/287 (29%), Gaps = 35/287 (12%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78 A +R+ ++N+ + + + SV + Q DI +QE+ + Sbjct: 81 ATALRIGAFNVQSFGDHKASDPDCGSV---------IAQILAGY--DIALVQEVRDPDLS 129 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 AV+ + + + + + RK V V +Y +D Sbjct: 130 AVSLLMEQINSVSKHEYGFVSSKPLGRDQYKEMYLFVYRKDVVSV-VSTYQYPDPED--- 185 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 A +R + G L + + +L + W Sbjct: 186 -AFSREPFVVKFSAPG----CAAKELVLIPLHAAPNQAVAEIDALYDVYLDVIDKW---- 236 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + + GDFN Y+ +D + + + N + D Sbjct: 237 --NTDDMLFLGDFNADCKYVKAHDWPSIRLRSSQVFKWLIPDSADTTVGNSDCAY----D 290 Query: 259 YFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 V+ K + +S S + E+ + + L SDH P+ + + Sbjct: 291 RIVVSGAHMRKSVKPQSASVHNFQEEFDLDQTQALAISDHFPVEVTF 337 >gi|288942589|ref|YP_003444829.1| endonuclease/exonuclease/phosphatase [Allochromatium vinosum DSM 180] gi|288897961|gb|ADC63797.1| Endonuclease/exonuclease/phosphatase [Allochromatium vinosum DSM 180] Length = 255 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 87/288 (30%), Gaps = 54/288 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEMG 75 ++ L+S+N+ E S + + ++ + Q + D+V LQE+ Sbjct: 3 QLNLLSYNVQAGIESRQYSDYLFQSWKHLLPHPERLTNLARIAQLLRQF--DVVGLQEVD 60 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + + + +T+ H R N ++ A +L + P + Sbjct: 61 AGSLRSSYVDQTQY---LATQGAFPHWYRQINRNLA-PFAQHSNG--LLARPRPACITEH 114 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R V ++ ++ + I + + Q +L Sbjct: 115 RLPGLPGRGVVVAEFALDDGEVLAIGIVHLALGWN------------ARRLQLDYLSRLA 162 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 V+ GDFN N G + ++ + D + R + Sbjct: 163 QTYP----YLVLMGDFNCGCNSKGLRNMVRRS---------GMRGLDCELKTFPSWRPRH 209 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D+ ++ + LSDH PIS+ + Sbjct: 210 NLDHILVS--------------RPIEVVAARVLDYALSDHLPISMRIE 243 >gi|218260769|ref|ZP_03475911.1| hypothetical protein PRABACTJOHN_01575 [Parabacteroides johnsonii DSM 18315] gi|218224372|gb|EEC97022.1| hypothetical protein PRABACTJOHN_01575 [Parabacteroides johnsonii DSM 18315] Length = 353 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 76/305 (24%), Gaps = 71/305 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + + +V++N + ++ + Y K L DIV QE Sbjct: 93 AASEQEGTPLTVVTYNASHFYWDRKYTMNEA------------AAYIKKLQPDIVCFQEA 140 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + YP+ K Sbjct: 141 PGDGYYHRDSIRYAFDYVLYKYISRRTDH----------------LPTTIYSRYPIHSVK 184 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC--------------------FLDSLE 174 + + + ++ V IN + I V++ H ++ + +L Sbjct: 185 ALYYKNSSNMSLIADVRINNQYIRVINNHFETTSVNAYRGIITAPGKSLEIRAKAVKNLI 244 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + + QA + I S P ++ GDFN + Sbjct: 245 LQMKDNNRKRAIQADSIYAEIR---RSPYPVIVCGDFNDTPASYTYHRV------RKGLT 295 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 F + + L IDY ++ D S SD Sbjct: 296 DGFQDAGNGYQYTFRQLYRLWRIDYVFYSESL--------------KGQDCFSPDVSYSD 341 Query: 295 HCPIS 299 H + Sbjct: 342 HNMVV 346 >gi|149197514|ref|ZP_01874565.1| hypothetical protein LNTAR_00995 [Lentisphaera araneosa HTCC2155] gi|149139532|gb|EDM27934.1| hypothetical protein LNTAR_00995 [Lentisphaera araneosa HTCC2155] Length = 266 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 85/307 (27%), Gaps = 56/307 (18%) Query: 2 IRKYVLALVFFLVPC--TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 ++K L L + S+ +VR+ ++N+ + Sbjct: 1 MKKLSLFLFILTTSFLISQSLNAQVRVAAYNVLYGLSGSP---------------EQIGA 45 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 + + D++ E+ + + A+V Y ++ D + +I R Sbjct: 46 MFRPYNLDMIGFNEVPNGDWTARVGKVLGMKYVYV-----GKISSANHKDKYKSILSRTP 100 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 + + AV EI G KI + +H+ Sbjct: 101 LKNTEEVALQ------GEHAWNPASAVYADTEIRGVKIRLYSLHVC-------------- 140 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 L L++ K++ ++ GDFN KI + Sbjct: 141 QARNLKSHIDRLREKYLSKEKKKN-IIVLGDFNDKIESPALTRLQEAGFHACWKDLNMNL 199 Query: 240 EKDSRCNANKNLRNK--IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 EK N N ID+ + K E LSDH P Sbjct: 200 EKAFTWNPNNPKSGLKEGVIDHIFYKSKSAKASKAEIIELQPP-----------LSDHKP 248 Query: 298 ISIDYDF 304 + + DF Sbjct: 249 VWAEIDF 255 >gi|294651921|ref|ZP_06729210.1| exodeoxyribonuclease III [Acinetobacter haemolyticus ATCC 19194] gi|292822153|gb|EFF81067.1| exodeoxyribonuclease III [Acinetobacter haemolyticus ATCC 19194] Length = 294 Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 81/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +R+VS N+N L L ++ + DAD+V +QE ++ Sbjct: 34 LRVVSINVNGLRASVTKG---------------LLEWLEQSDADVVCMQESRITHEQWTD 78 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 F W ++ A+ + V + DS R Sbjct: 79 KFKPEGWYTHLFPAERAGYA----------GTAIYSRLPFVSVTNGLGFELADSQGRF-- 126 Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++ + + ++L S D + + + + Q ++ Sbjct: 127 ---ITAEFDLGLSHPVHIASLYLPSGSSGD-------EAQARKDVFLEEYAKILKQWRDE 176 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD+N + + + I + +E Sbjct: 177 NKSIIVCGDYNIVHKRIDIKNWSGNQKSSGVLPHERSWLDHIYDELGYVDTFREVRPEAE 236 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + + + SDH P Sbjct: 237 LYSWWSNRGQARAKNVGWRIDYHACSPDWKARTANAWV-----------YKEQWFSDHAP 285 Query: 298 ISIDY 302 + IDY Sbjct: 286 VIIDY 290 >gi|62078909|ref|NP_001014110.1| endonuclease/exonuclease/phosphatase family domain-containing protein 1 [Rattus norvegicus] gi|81883711|sp|Q5XI74|EEPD1_RAT RecName: Full=Endonuclease/exonuclease/phosphatase family domain-containing protein 1 gi|53733575|gb|AAH83816.1| Endonuclease/exonuclease/phosphatase family domain containing 1 [Rattus norvegicus] gi|68533864|gb|AAH99214.1| Endonuclease/exonuclease/phosphatase family domain containing 1 [Rattus norvegicus] gi|149027895|gb|EDL83355.1| similar to RIKEN cDNA 2310005P05 [Rattus norvegicus] Length = 569 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 35/296 (11%), Positives = 79/296 (26%), Gaps = 35/296 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 RL +WN+ S V N R TLL K ++ +QE+ A+ K Sbjct: 261 FRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDKEALEKF 311 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDI------------HTAIAVRKK-NVRVLQQSYPL 130 + I + + + ++ NV + Sbjct: 312 CTELNQPILPNIRKWKGPRGCWRSIVAEKPSSQLQKGPCYSGFLWDTAANVELRDIPGQE 371 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + ++ ++ + ++++ L + ++ + S Sbjct: 372 SSPSNGHAKTVGPSPFLARFKVGSNDLTLVNLQLTALALPGVENSSKNHSDGHR---LLN 428 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + + + VI GDF + + + + P + + Sbjct: 429 FALTLQETLKGEKDVVILGDFGQGPDSSDYD-----ILRREKFHHLIPAHTFTNISTRNP 483 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302 +K D + ++ K I S+HCP+ + Sbjct: 484 QGSKSV-DNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEL 538 >gi|327300110|ref|XP_003234748.1| endonuclease/exonuclease/phosphatase [Trichophyton rubrum CBS 118892] gi|326463642|gb|EGD89095.1| endonuclease/exonuclease/phosphatase [Trichophyton rubrum CBS 118892] Length = 322 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 39/293 (13%), Positives = 79/293 (26%), Gaps = 24/293 (8%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD-IVFLQEMGSYNAVAK 82 R+++ NI + R L Y L+ + V LQE Sbjct: 40 FRILTHNIRYATTSPSAGEQP-WSIRAPHIVNEL-DYHSRLNPESFVCLQEALHNQVTDV 97 Query: 83 VFP--------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + W + + S A+ ++ V P + +K Sbjct: 98 LAGLNARPHAQADEWAYYGVGRDDGKQAGEYSPIFYRPAVWTLQERETVWLSETPSVPSK 157 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + A R + VL ++ D + S L+ ++ + Sbjct: 158 -GWDAASIRIVTIGVFNHKASNTTVLAMNTHL---DDQGSKSRLESAKLI---LSLIQKY 210 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP----KEKDSRCNANKN 250 + + + +AGDFN + + D+ + P + Sbjct: 211 LARH-PEVKGNFLAGDFNSIESQEAYREFTKPGSSIVDTYKKVPAAQHYGDEITFTGFDG 269 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY ++ + I + + + SDH + D Sbjct: 270 KTKGSRIDYVMVGPQSASASIPFTVN-GYAVVPNRFDNRIYNSDHRAVVADVT 321 >gi|289522833|ref|ZP_06439687.1| endonuclease/exonuclease/phosphatase family protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503857|gb|EFD25021.1| endonuclease/exonuclease/phosphatase family protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 240 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 76/278 (27%), Gaps = 46/278 (16%) Query: 29 WNINTLSEQEGVSLWKNSVK----RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +NI + +T ++ + + L+ DIV L E Sbjct: 3 YNIRYATGTGWDYHIPFPFWGSFRKTEKNFEDISDFLIKLNPDIVGLVESDGGTYRQNGK 62 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + I K + I A ++ + V+ + P+ S R Sbjct: 63 SQPVEMASKIGGTPIFGCKYHPKSFITKAPVLKLQGNAVVSKIPPIKSNIKYLSFGVKRA 122 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 +E+ + + +HL +A+ L++ + + P Sbjct: 123 MLEVEYD----DFVLYLVHLSLG----------------RKARAKQLEELSRKCLSADKP 162 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 ++AGD N K N + P + ++ +D+ + Sbjct: 163 VILAGDCNTFGGEEELEPLIRKVGLKNANADCMP--------TYPSSSPRMLLDFVLHSP 214 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D+ SDH P+ D+ Sbjct: 215 KI--------------KVTDLLIPRVTFSDHLPLVCDF 238 >gi|239607422|gb|EEQ84409.1| endonuclease/exonuclease/phosphatase [Ajellomyces dermatitidis ER-3] gi|327352411|gb|EGE81268.1| endonuclease/exonuclease/phosphatase [Ajellomyces dermatitidis ATCC 18188] Length = 297 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 35/293 (11%), Positives = 77/293 (26%), Gaps = 21/293 (7%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+++ NI + K R L ++++ + LQE+ Sbjct: 8 PLRILTHNIRY-ATSAPFRGEKPWKDRKQRLINELHYHSRHNPETFICLQEVLHVQVTDI 66 Query: 83 VFPKNT---------WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + N W + S A+ +++ V P + Sbjct: 67 LSGLNPNANKDATAEWAYIGVGRDDGKQAGEFSPIFYRPAVWELEESKTVWLSETPSVP- 125 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + + R + + + VL ++ D + + L+ Sbjct: 126 SRGWDASSVRIITIGVFKHIVSRKRVLGMNTHL---DDQGSKSRYEAAKLILGLINQFLT 182 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 ++ +AGDFN + N + + +D + + Sbjct: 183 KNQLAGRNINGVFLAGDFNSEENQEAYSVLTAADSQLVDAQKQVDAAFRYGSENTYTGFG 242 Query: 251 LR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + + + + G SDH + D Sbjct: 243 YEDEGPKRIDYVLFGPQRGANM--SWIVDGYAVLPNKFDDGVLNSDHRAVVAD 293 >gi|255530398|ref|YP_003090770.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] gi|255343382|gb|ACU02708.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] Length = 370 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 46/301 (15%), Positives = 93/301 (30%), Gaps = 62/301 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R++++N+++ ++ S + +N + DI+ QE + Sbjct: 106 IRMMTYNVHSFKPYGEGNI--------ESVKQQMLDLIENENPDIICFQEYFTRKKGPYD 157 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + I ++ T +A+ K + + S Sbjct: 158 ITDSLKRILNKPYHYFEPISQNDY--EATGLAIFSKYPIKNKGTIAFNKVYRGNS----- 210 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENT---------------------YSPSCS 182 ++ + V + K + ++H++S F + + Sbjct: 211 -SIYVDVTVKNKMFRIYNVHMQSISFQEQDYMYLDQVKYQMDPKLYASKRILVMLRNAFL 269 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 S+Q +K I + +PF+IAGDFN SL KE+ Sbjct: 270 KRSEQVDIMKAHIKTCE---LPFIIAGDFNDTPASYAVKQMT-------KSLKNTFKEQG 319 Query: 243 SRCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + N + IDY ++F + Y + +LSDH P+ D Sbjct: 320 TGFGKTYNGKFPNFQIDYI---------ATTQNFDVMNYRIIEA-----KLSDHFPVRSD 365 Query: 302 Y 302 Sbjct: 366 L 366 >gi|170037903|ref|XP_001846794.1| carbon catabolite repressor protein [Culex quinquefasciatus] gi|167881236|gb|EDS44619.1| carbon catabolite repressor protein [Culex quinquefasciatus] Length = 409 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 38/318 (11%), Positives = 94/318 (29%), Gaps = 47/318 (14%) Query: 24 VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++ +N+ + + ++ + + ++ ADI+ LQE+ + Sbjct: 86 FTVMCYNVLCDKYATRQMYGYCPSWALSWEYRKKAILDEIRHYSADIISLQEVETDQFFN 145 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLL------ 131 P+ + + +K S +D AI R +++++ Sbjct: 146 FFKPELKNDGYEGIFSPKSRAKTMSESDRKYVDGCAIFFRSSKFSLIKETLVEFNQLAMA 205 Query: 132 ---GAKDSFSRAGNR-----RAVELLVEINGKKIWV--------LDIHLKSFCFLDSLEN 175 G+ + +R + A+ + E + + V + + + + Sbjct: 206 NAEGSDNMLNRVMPKDNIGLAALLKVKESAWEGLTVEQAAISQPILVCTAHIHWDPEFCD 265 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPF-------VIAGDFNRKINYLGNNDDFWKTI 228 +LS + + + D + + V+ GDFN + Sbjct: 266 VKLIQTMMLSNEIKTILDEASHSFRPGHKYDTNNVQLVLCGDFNSLPDSGVIE------F 319 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK---FLIQESFSEILYNEDDI 285 + ++ + R IDY + L S + N+ Sbjct: 320 LSAGRVSMDHQDFKELGYKSCLQR---IIDYIFYSKQGMVPLGLLGPISGEWLRENKVVG 376 Query: 286 KSRGKRLSDHCPISIDYD 303 SDH P+ ++ + Sbjct: 377 CPHPHIPSDHFPLLVELE 394 >gi|297380626|gb|ADI35513.1| exodeoxyribonuclease III [Helicobacter pylori v225d] Length = 250 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++DADI +QE + + + Sbjct: 1 MKLISWNVNGLRACMTKGFM---------------DFFNSVDADIFCIQE----SKMQQE 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + + D R Sbjct: 42 QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINIEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + +++++++ + S + + + L+ Sbjct: 91 -----VVTCEFELFYLVNVYVPNSQQALSRLSYRMSWEVEFRKFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|294828440|ref|NP_714184.2| sphingomyelinase C precursor [Leptospira interrogans serovar Lai str. 56601] gi|293386294|gb|AAN51202.2| sphingomyelinase C precursor [Leptospira interrogans serovar Lai str. 56601] Length = 510 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 33/298 (11%), Positives = 85/298 (28%), Gaps = 30/298 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + ++S+N+ S+++ + LL + + D++ L + NA Sbjct: 31 DLNILSYNLFLYSKEDIYFGY----WEEEKRAELLGKSKFTKNQDVIVLSRVFDTNARNT 86 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHT-------AIAVRKKNVRVLQQSYPLLGAKD 135 + T+ + + + K + Y Sbjct: 87 LLDNLNLEYPDQTDVIGKTKYGWDQTLGDFRQQINNGGVVILSKWPIQEKIQYIFKNHGC 146 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 N+ + ++ + I ++ +S S + Q +K +I Sbjct: 147 GNDTFYNKGFAYVKIKKGSQIIHIVGTDTQSEDSTCSDLG-----VNARINQLTEIKKFI 201 Query: 196 T-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-------- 246 ++ + +IAG N + + ++ N+ Sbjct: 202 DSKRISNKEIVLIAGALNVDKSNQSEYKNMLNILEVNEPNYAGIPFTWDTKKNKIAAYNN 261 Query: 247 -ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----KRLSDHCPIS 299 + +Y ++ +N ++ I ++ + + K + SDH PI Sbjct: 262 IYYSWNQTSNYGEYILVSKNHFQLPIWQNLAYDPISPTTWKRKNGYTSYEFSDHFPIY 319 >gi|108563814|ref|YP_628130.1| exodeoxyribonuclease III [Helicobacter pylori HPAG1] gi|107837587|gb|ABF85456.1| exodeoxyribonuclease [Helicobacter pylori HPAG1] Length = 250 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 81/303 (26%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++DAD+ +QE + + + Sbjct: 1 MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + + D R Sbjct: 42 QNTFEFRGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINIEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + ++++++ + S + + + L+ Sbjct: 91 -----VVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFSELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|19075401|ref|NP_587901.1| CCR4-Not complex subunit Ccr4 (predicted) [Schizosaccharomyces pombe 972h-] gi|74582584|sp|O74874|CCR4_SCHPO RecName: Full=Glucose-repressible alcohol dehydrogenase transcriptional effector; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase gi|3702632|emb|CAA21225.1| CCR4-Not complex subunit Ccr4 (predicted) [Schizosaccharomyces pombe] Length = 690 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 46/345 (13%), Positives = 90/345 (26%), Gaps = 57/345 (16%) Query: 15 PCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 P T S K ++S+N+ + + + L+ Q +ADI+ LQ Sbjct: 327 PSTTSKNLKFTIMSYNVLCERYATSTLYGYTPSWALSWSYRKDLIMQELGGYNADIICLQ 386 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH----TAIAVRKKN-------- 120 E+ N P+ + + + + + + A + Sbjct: 387 EVDVENYDTFFAPQMSLKGYKGVHFPKSRVRTMNEVERRIVDGCATFFKTSKYVMHEKMV 446 Query: 121 ------VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDS 172 + +Q L + + +V L+E NG ++ V + H+ Sbjct: 447 IEYNQAPSLRRQDIKLTSNMYNRVMTKDNISVITLLENKENGSRLIVANCHIHWDPQFRD 506 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLV--------------PFVIAGDFNRKINYL 218 ++ Q + K S P +I GDFN Sbjct: 507 VKVIQVAMLMDEIAQVATKFRNMPSKIPSDQLKDERPTYPEYLKIPILICGDFNSVQGSG 566 Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCN--------------------ANKNLRNKIPID 258 + +I N + N N K ID Sbjct: 567 VYDFLSSGSISQNHEDFMNNDYGEYTVNGRSHAFNLKSAYGESEALSFTNYTPGFKGAID 626 Query: 259 YFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + N + + + + SDH + ++ Sbjct: 627 HIWYTGNSLEVTGLLKGVDKDYLSGVVGFPNAHFPSDHICLLAEF 671 >gi|291457695|ref|ZP_06597085.1| exodeoxyribonuclease III [Bifidobacterium breve DSM 20213] gi|291380748|gb|EFE88266.1| exodeoxyribonuclease III [Bifidobacterium breve DSM 20213] Length = 286 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 78/311 (25%), Gaps = 57/311 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VA 81 + + + N+N + + + +A D+ +QE+ + V Sbjct: 2 TITITTSNVNGIRA---------------AKRKGIEDWAGKHAPDVWCMQEVRAPQDDVD 46 Query: 82 KVFPKNTWCIFYSTERLINHS----KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +F + + + + + + + ++ ++D Sbjct: 47 SIFDEFGFEYATAGKIDAPADLHTMNEVCRVKGRAGVGLLTDLEVLDKRYGLPGLSEDVD 106 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 S R + G I V +++ + D L + + Sbjct: 107 S---GRWIETDVKTPEGYTITVASVYIHAGNTDD--PTKMEQKYRFLDTMLARMGALRDE 161 Query: 198 KKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEK 241 V+ GDFN K +D + + Sbjct: 162 AAHGGKQAVLCGDFNIAHTPLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLA 221 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + IDY + + + D + KR Sbjct: 222 GDIQGPYTWWSQRGRAFDNNVGWRIDYQFATPELAE-------TARGFVIDKAPTYDKRW 274 Query: 293 SDHCPISIDYD 303 SDH P++I Y+ Sbjct: 275 SDHAPLTITYE 285 >gi|217031877|ref|ZP_03437380.1| hypothetical protein HPB128_199g85 [Helicobacter pylori B128] gi|298735503|ref|YP_003728024.1| exodeoxyribonuclease III [Helicobacter pylori B8] gi|216946529|gb|EEC25131.1| hypothetical protein HPB128_199g85 [Helicobacter pylori B128] gi|298354688|emb|CBI65560.1| exodeoxyribonuclease III [Helicobacter pylori B8] Length = 250 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 81/303 (26%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++DAD+ +QE + + + Sbjct: 1 MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + + D R Sbjct: 42 QNTFEFNGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINIEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++++++ + S + + + L+ Sbjct: 91 -----VITCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFSELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKDIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|294625005|ref|ZP_06703655.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600680|gb|EFF44767.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 330 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 36/298 (12%), Positives = 75/298 (25%), Gaps = 74/298 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 ++ ++N+N ++ L ++ + DIV LQE+ S + Sbjct: 7 KIATFNVNGIAS----------------RLPHLLEWLQREQPDIVGLQELKSTQSA---- 46 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGN 142 R + +A+ R +++ P Sbjct: 47 ------FPEQAIRDAGYGVIWHGEKSWNGVALLARGTEPVEIRRGLPW----------DP 90 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R +E + V ++L + + Y + + L + Sbjct: 91 RDTQSRYLEAAIHGVVVACLYLPNGNPQPGPKFDYKLA------WFERLIRHAKTLVDLP 144 Query: 203 VPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNA 247 P + GDFN D ++T+ P Sbjct: 145 HPVALIGDFNVVPTDADIYDPKGWRKDALLQPESREAYQTLLAQGWTDSLPAIHGQTPIY 204 Query: 248 NKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ ++++ L D ++ SDH P Sbjct: 205 TFWDYFRQHFARDRGLRIDHLLLNRTLGPGLQDAGV-------DKWVRALEKASDHAP 255 >gi|213403402|ref|XP_002172473.1| inositol phosphosphingolipids phospholipase C [Schizosaccharomyces japonicus yFS275] gi|212000520|gb|EEB06180.1| inositol phosphosphingolipids phospholipase C [Schizosaccharomyces japonicus yFS275] Length = 427 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 58/323 (17%), Positives = 98/323 (30%), Gaps = 63/323 (19%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 T+ A ++++S+N L + K T + D DIV LQE+ S Sbjct: 2 TSEKADNIKVLSFNCWGL---------RFVSKYRTERLHAIGVKLSECDYDIVLLQEVWS 52 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ--SYPLLGAK 134 N + I ST + +S+ + + +AV + V YPL G Sbjct: 53 IN--------DYHSIQNSTRENLPYSRFYHSAAMGAGLAVLSRYPIVETTMNKYPLNGRP 104 Query: 135 DSFSRAGN---RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 +F R + ++ GK I V D HL + QA + Sbjct: 105 QAFWRGDWYVGKGVATASLQHPSGKIISVFDTHLHAPYGKGEDTY-----LCHRMAQAWY 159 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPNDSLIRFPKEKD 242 + I + + AGDFN + +N D W ++ P+ + Sbjct: 160 ISKLIRAAVQRGHIVLAAGDFNFQPLTEPHNIITSYGLVSDSWLSVHPDQYKNAPSRFTL 219 Query: 243 S------------RCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILY 280 S + N N +DY N + + Sbjct: 220 SDQELIDILGVTCDSHLNTWRANVSDKDMDDYVAKRLDYVFHSPNNTDAVSSKVV----- 274 Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303 + + SDH I + + Sbjct: 275 FTEHVPKLDCSYSDHFAIEVVLE 297 >gi|71043966|ref|NP_085139.2| endonuclease/exonuclease/phosphatase family domain-containing protein 1 [Homo sapiens] gi|296434489|sp|Q7L9B9|EEPD1_HUMAN RecName: Full=Endonuclease/exonuclease/phosphatase family domain-containing protein 1 Length = 569 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 35/296 (11%), Positives = 78/296 (26%), Gaps = 35/296 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+ S V N R TLL K ++ +QE+ A+ K Sbjct: 261 LRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 311 Query: 84 FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKKNV-RVLQQSYPL 130 + + + + + Sbjct: 312 CTELNQPTLPNIRKWKGPRGCWKAVVAEKPSSQLQKGAGYAGFLWDAAAGMELRDAGSQE 371 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + + ++ + ++++HL + L S + + S Sbjct: 372 SSPSNGHGKLAGPSPYLGRFKVGSHDLTLVNLHLAALTLLGSENPSKNHSDGHR---LAS 428 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + + + +I GDF + + + I + + KN Sbjct: 429 FAQTLQETLKGEKDVIILGDFGQGPDSNDYD------ILRKEKFHHLIPAHTFTNISTKN 482 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302 + +D + ++ K I S+HCP+ ++ Sbjct: 483 PQGSKSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEF 538 >gi|12697957|dbj|BAB21797.1| KIAA1706 protein [Homo sapiens] Length = 573 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 35/296 (11%), Positives = 78/296 (26%), Gaps = 35/296 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+ S V N R TLL K ++ +QE+ A+ K Sbjct: 265 LRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 315 Query: 84 FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKKNV-RVLQQSYPL 130 + + + + + Sbjct: 316 CTELNQPTLPNIRKWKGPRGCWKAVVAEKPSNQLQKGAGYAGFLWDAAAGMELRDAGSQE 375 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + + ++ + ++++HL + L S + + S Sbjct: 376 SSPSNGHGKLAGPSPYLGRFKVGSHDLTLVNLHLAALTLLGSENPSKNHSDGHR---LAS 432 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + + + +I GDF + + + I + + KN Sbjct: 433 FAQTLQETLKGEKDVIILGDFGQGPDSNDYD------ILRKEKFHHLIPAHTFTNISTKN 486 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302 + +D + ++ K I S+HCP+ ++ Sbjct: 487 PQGSKSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEF 542 >gi|14042026|dbj|BAB55076.1| unnamed protein product [Homo sapiens] gi|41388939|gb|AAH65518.1| EEPD1 protein [Homo sapiens] gi|51094729|gb|EAL23976.1| KIAA1706 protein [Homo sapiens] gi|119614469|gb|EAW94063.1| KIAA1706 protein [Homo sapiens] gi|168270656|dbj|BAG10121.1| KIAA1706 protein [synthetic construct] Length = 569 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 35/296 (11%), Positives = 78/296 (26%), Gaps = 35/296 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+ S V N R TLL K ++ +QE+ A+ K Sbjct: 261 LRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 311 Query: 84 FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKKNV-RVLQQSYPL 130 + + + + + Sbjct: 312 CTELNQPTLPNIRKWKGPRGCWKAVVAEKPSNQLQKGAGYAGFLWDAAAGMELRDAGSQE 371 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + + ++ + ++++HL + L S + + S Sbjct: 372 SSPSNGHGKLAGPSPYLGRFKVGSHDLTLVNLHLAALTLLGSENPSKNHSDGHR---LAS 428 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + + + +I GDF + + + I + + KN Sbjct: 429 FAQTLQETLKGEKDVIILGDFGQGPDSNDYD------ILRKEKFHHLIPAHTFTNISTKN 482 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302 + +D + ++ K I S+HCP+ ++ Sbjct: 483 PQGSKSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEF 538 >gi|254804108|ref|YP_003082329.1| putative DNA repair endonuclease [Neisseria meningitidis alpha14] gi|254667650|emb|CBA03464.1| putative DNA repair endonuclease [Neisseria meningitidis alpha14] Length = 259 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 79/305 (25%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S N+N + + +Y ADIV +QE+ + A Sbjct: 2 LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEA-DLS 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ +AV K +G R Sbjct: 46 ADMKNPHGMHGYWHCA-------EKRGYSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + ++ V+ ++L S + + + + + K Sbjct: 95 F-----VRCDFDRLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNEGR 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248 V+ GD+N + + + + Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGY 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY ++ + + ++ SDH P+ Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 251 Query: 300 IDYDF 304 ++YD+ Sbjct: 252 MEYDY 256 >gi|226289230|gb|EEH44742.1| endonuclease/exonuclease/phosphatase family protein [Paracoccidioides brasiliensis Pb18] Length = 316 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 75/311 (24%), Gaps = 38/311 (12%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+++ NI + K R L + ++ + LQE+ Sbjct: 8 PIRILTHNIRY-ATSAPFKGEKPWPYRKQPLLNELHYHTRHNPESFICLQEVLHSQLTDI 66 Query: 83 VFPKN---------------------------TWCIFYSTERLINHSKRDSNNDIHTAIA 115 + N W + S +I Sbjct: 67 LSGLNSSPTKHSTGSTGTGSGTGTGACASAAGEWAYIGVGREDGKQAGEYSPIFYRPSIW 126 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + V P + +K + A R + + + + VL + D Sbjct: 127 DLESFKTVWLSETPSVPSK-GWDAASPRLVTIGVFKHHASQKRVLAMSTHL---DDQGST 182 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 + L+ Q + ++ +AGDFN + N D+ Sbjct: 183 ARYQAAKLILSQINAYLSQAQLARRNINGVFLAGDFNSEENQEAYIVLTGAESSLVDAHK 242 Query: 236 RFPKEKDSRC-NANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + N IDY + + + + G Sbjct: 243 EVEESLRYGSVNTYTGFGYEDEGPKRIDYVLFGPERGTASMPWTIE-GYAVLPNKFDDGV 301 Query: 291 RLSDHCPISID 301 SDH + D Sbjct: 302 LSSDHRAVVAD 312 >gi|164687368|ref|ZP_02211396.1| hypothetical protein CLOBAR_01009 [Clostridium bartlettii DSM 16795] gi|164603792|gb|EDQ97257.1| hypothetical protein CLOBAR_01009 [Clostridium bartlettii DSM 16795] Length = 215 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 99/285 (34%), Gaps = 76/285 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NI+T ++++ + +Y K + DI+ LQE+ Sbjct: 1 MKIISYNIHTGTDKDKNRT-----------LRQMAKYLKIQNCDIICLQEVL-------- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + ++ + ++ + I + K + + L + R Sbjct: 42 --YSQYRMLKFYLQMDGSFAENVSDKQY-GICIFSKYKILARNHVFLTS------KKEQR 92 Query: 144 RAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + V+I G + + V++ HL +Q + ++I+ E Sbjct: 93 GFAHIKVKIEGDRYLNVINTHLGL-------------DKDERVKQINEILNFISINLEGN 139 Query: 203 ----VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 ++ GDFN K Y+ N +D ++ ++ K ID Sbjct: 140 IEDLAGNIVCGDFNEKNIYMNNFNDVAVDLNKDNLPTFA----------------KNRID 183 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 Y + +N Y D++ +SDH P+ +++ Sbjct: 184 YCFISENLTAK---------SYTVDEV-----YMSDHFPVIVEFS 214 >gi|154507938|ref|ZP_02043580.1| hypothetical protein ACTODO_00424 [Actinomyces odontolyticus ATCC 17982] gi|153797572|gb|EDN79992.1| hypothetical protein ACTODO_00424 [Actinomyces odontolyticus ATCC 17982] Length = 271 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 33/309 (10%), Positives = 78/309 (25%), Gaps = 67/309 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R +WN+N + + + + D++ +QE+ Sbjct: 1 MRFATWNVN----------------SIRTRVDRVIAFLERSGTDVLAMQEIKCRPD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +AV + + Q + Sbjct: 41 ------QFPTEAFEEAGYHVAIHGLNQWNGVAVASRLPILDVQDHFPTQPAFGEPPVVEA 94 Query: 144 RAVELLVEINGK---------KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 RA+ + ++ + + +++ + L Y L+ A+ + W Sbjct: 95 RALGVTIDTTDTLPSEDRQASSMTIWSLYVPNGRELTHAHYAYK--LEWLANLAEQGRGW 152 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFW-----------KTIDPNDSLIRFPKEKDS 243 + + + GD+N D + + + + Sbjct: 153 L---TDPSALIALVGDWNVAPMDEDVWDMSAFEGATHVSAPEREAFAAFAADGWVEVTRE 209 Query: 244 RCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 R + ID+ + D + +GK SD Sbjct: 210 RVTNYTYWDYQKLRFPKNEGMRIDFAYCSPALAARVSGAQI-------DRDERKGKGASD 262 Query: 295 HCPISIDYD 303 H P+ +D D Sbjct: 263 HVPVIVDVD 271 >gi|228909564|ref|ZP_04073387.1| Exodeoxyribonuclease [Bacillus thuringiensis IBL 200] gi|228849853|gb|EEM94684.1| Exodeoxyribonuclease [Bacillus thuringiensis IBL 200] Length = 244 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 27/270 (10%), Positives = 71/270 (26%), Gaps = 63/270 (23%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 +Y + ADI LQE+ + + + + + ++ A+ Sbjct: 14 EYLEESSADIFCLQEIKLQEGQIDLNLEGYYTYW-----------NYAVKKGYSGTAIFS 62 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K + + D R + + + +++ ++ + + Sbjct: 63 KKEPLSVTYGLGIEEHDQEGRL---------ITLEFEDFYMITLYTPNSKRGLERLDYRM 113 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR---------------KINYLGNNDD 223 + L + + GD N + + Sbjct: 114 KWEDDFRSYIKRL--------DEKKTVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 165 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQES 274 + I + + ++ A + +DYFV+ + + + Sbjct: 166 KFTCILEEGFVDTYRYLYPNQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEVK 225 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + SDHCP+ + +F Sbjct: 226 INSEV-----------MGSDHCPVELYINF 244 >gi|224438361|ref|ZP_03659288.1| exodeoxyribonuclease LexA [Helicobacter cinaedi CCUG 18818] gi|313144803|ref|ZP_07806996.1| exodeoxyribonuclease LexA [Helicobacter cinaedi CCUG 18818] gi|313129834|gb|EFR47451.1| exodeoxyribonuclease LexA [Helicobacter cinaedi CCUG 18818] Length = 251 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 76/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++ADI +QE Sbjct: 1 MKLISWNVNGLRACMNKGFM---------------DFFNEVNADIFCIQESKMQKD-QGD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + ++++ + + + V K + + D R Sbjct: 45 FSFQGYSEYWNSAEKKGY----------SGVVVLSKIKPLQVTYDMGISHHDKEGRI--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ ++++++ + + L + Sbjct: 92 ------ITAEYERFYLVNVYTPNAKRELERLEYRMEWEDDFRAFVKKL--------KKHK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P VI GD N + + + F + A Sbjct: 138 PVVICGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKMSELLESGFIDTFRHFYPTLEGAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ + L ++ SDHCP+ Sbjct: 198 SWWSYMGKARENNTGWRIDYFLCSTSLESHLKDAKIYPHIF-----------GSDHCPVG 246 Query: 300 IDYD 303 + D Sbjct: 247 LSMD 250 >gi|88856446|ref|ZP_01131104.1| exodeoxyribonuclease III [marine actinobacterium PHSC20C1] gi|88814313|gb|EAR24177.1| exodeoxyribonuclease III [marine actinobacterium PHSC20C1] Length = 286 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 47/323 (14%), Positives = 89/323 (27%), Gaps = 79/323 (24%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++R+ S N+N + + + + D DI+ LQE+ + +A Sbjct: 2 ATRLRIASVNVNGVRA---------------AYRKGMGDWLDARDIDILALQEVRAADAD 46 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + W I + + A+A RK + ++ + D F A Sbjct: 47 IEGLLGDGWNILHDAATAKGRAG--------VALASRKGSAASAPVAHRVALGADDFDSA 98 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 G ++ +++GK + V+ ++ S + + + L Sbjct: 99 GR--WLKADFDVDGKTVTVVSTYVHSGVVDTPKQVEKYKFLEAMLVRLPELAA------- 149 Query: 201 SLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSR 244 +I GD N L + F + N + Sbjct: 150 HSDHALIVGDLNVGHRELDIKNWRGNRKKAGFLLEERAYFDRIFGANGETVECVDGTTGP 209 Query: 245 C---------------NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILY 280 + IDY V Y Sbjct: 210 GLGWVDVGRQFAGEIDGPYTWWSQRGQAFDTDTGWRIDYHVATPALAAS-------VADY 262 Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303 D + +R SDH P+ +DY Sbjct: 263 RIDKAGAWDERWSDHAPVVVDYS 285 >gi|299768386|ref|YP_003730412.1| catabolite repression control protein [Acinetobacter sp. DR1] gi|298698474|gb|ADI89039.1| catabolite repression control protein [Acinetobacter sp. DR1] Length = 274 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 82/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +R+VS N+N L L ++ + DAD+V +QE ++ + Sbjct: 14 LRVVSINVNGLRSSVTKG---------------LLEWLEQSDADVVCMQESRITHEQWTE 58 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 F W ++ A+ + V + DS R Sbjct: 59 KFRPEGWHTHLFPAERAGYA----------GTAIYSRLPFVSVKDGLGFELADSQGRF-- 106 Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++ + + ++L S + + + + Q ++ Sbjct: 107 ---ISAEFDLGLSHPVHIASLYLPSGSSGE-------EAQARKDLFLGEYAKILKQWRDE 156 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 +I GD+N + + + I + + + Sbjct: 157 NKSVIICGDYNIVHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDELGYVDTFRVVRAEAE 216 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + + + + SDH P Sbjct: 217 LYSWWSNRGQARAKNVGWRIDYQACSPDWKTRVANAWV-----------FKDQWFSDHAP 265 Query: 298 ISIDY 302 + IDY Sbjct: 266 VIIDY 270 >gi|206598220|gb|ACI16023.1| RNA-editing complex protein mp100 [Bodo saltans] Length = 755 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 86/303 (28%), Gaps = 31/303 (10%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLW--KNSVKRTTSDYTLLRQYAKNLDADIV 69 F V ++ +SWN+ + + Y +L + + DAD++ Sbjct: 470 FPVGPKPEQQTTIKFLSWNVMFDRYSGKPTPLGMPGIDWCSPQRYPVLSKVMERSDADVI 529 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 +QE+ + + + N + V K+ V + Sbjct: 530 GMQEVEPAFWAFLADQPWVKANYMFSCNKSGPAI----NPWGVLMMVHKRLVVDQLTHHN 585 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + S L +++NGK + V IHL + S + Q Sbjct: 586 VPAWAGHVSLLP-----VLTIKVNGKPLHVAAIHLIAPF--------TKGRESARTGQDS 632 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKIN------YLGNNDDFWKTIDPNDSLIRFPKEKDS 243 L+ +T+ V GDFN + W + P D E ++ Sbjct: 633 ALRQRLTKSISGD--CVTMGDFNDWPTNEFIMPTDSGYTEAWPIVCPGDPGKTM-DETNT 689 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISI 300 C D K L + NE++ + SDH + Sbjct: 690 FCRLKIEEIFFGRSDKVFYRGQRLKPLAAKMVGTKSVNEENGNTAAPAYLFPSDHYGVET 749 Query: 301 DYD 303 + Sbjct: 750 TFS 752 >gi|15892951|ref|NP_360665.1| exodeoxyribonuclease III [Rickettsia conorii str. Malish 7] gi|15620145|gb|AAL03566.1| exodeoxyribonuclease III [Rickettsia conorii str. Malish 7] Length = 260 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 88/303 (29%), Gaps = 69/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + LLR + + DI+ LQE+ A Sbjct: 1 MKIATWNIN----------------SIKTRLNLLRNFLSKENPDILLLQEIKCETA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ + +A+ K + +++ R Sbjct: 41 ------KFPFDALSDLPYNSYVHGQKSYNGVAIISKFP----ADEIIKDFPNNYCSDQAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E+ + + ++ ++ + F+ S + + ++++ KK Sbjct: 91 F-LEIKLSLPIGFCNIISLYAPNGAFVGSDKFVAKLAF------YDNFINYLSTKKSFDE 143 Query: 204 PFVIAGDFNRKINYLGNNDDFW---------------KTIDPNDSLIRFPKEKDSRCNAN 248 +I GDFN + +TI + + S+ Sbjct: 144 KTIIGGDFNIAPFDIDVYSPKLLAETTCFTEVEQKKLRTILNSGFEDLYRLMHPSKQE-F 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID + N +L D ++ SDH P+ Sbjct: 203 SWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYM-------DYNLRTQEKPSDHIPVI 255 Query: 300 IDY 302 + Sbjct: 256 ASF 258 >gi|326523229|dbj|BAJ88655.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 531 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 88/304 (28%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++SWN+N L + + + A+ D D++ LQE +V Sbjct: 271 LKILSWNVNGLRALVKSRGF------------SIHELAQREDFDVLCLQETKMQEKDVEV 318 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + ++ + ++ A+ + + + + D+ R Sbjct: 319 IKESLLEGYTNSFWT-----CSVSKLGYSGTAIISRVKPLSIKYGLGVPDHDTEGRI--- 370 Query: 144 RAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V + ++L ++ + L L + L + L+ Sbjct: 371 ------VTVEFDDFYLLTAYVPNSGDGLKRLTYRVTEWDPCLGNYMKELEK--------S 416 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNA 247 P ++ GD N + +D + + +++ Sbjct: 417 KPVILTGDLNCAHQEIDIHDPAGNSRSAGFTKEERKSFETNFLSKGFVDTFRKQHPDVVG 476 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +DYF++ ++ + + D SDH P+ Sbjct: 477 YSYWGYRHNCRKTNRGWRLDYFLVSESIAERIH-----------DSYILPDVSASDHSPL 525 Query: 299 SIDY 302 + Sbjct: 526 GLIL 529 >gi|308064283|gb|ADO06170.1| exodeoxyribonuclease III [Helicobacter pylori Sat464] Length = 250 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 82/303 (27%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N L + ++DADI +QE + + + Sbjct: 1 MKLVSWNVNGLRACMTKGFM---------------DFFNSVDADIFCIQE----SKMQQE 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + + D R Sbjct: 42 QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINIEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + +++++++ + S + + + L+ Sbjct: 91 -----VVTCEFELFYLVNVYVPNSQQALSRLSYRMSWEVEFRKFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSHPLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|257876222|ref|ZP_05655875.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] gi|257810388|gb|EEV39208.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] Length = 257 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 28/284 (9%), Positives = 69/284 (24%), Gaps = 35/284 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ ++N+ V + + + D D++ +QE + A + Sbjct: 1 MKAATYNLR-------VDTDYDQEWQWHYRSEAVCSLIDYYDWDVLAIQEAR-PSQFADL 52 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + A + L A +R Sbjct: 53 AKLAQYASVTAERDGDGLGEGIGLYYQKEAFELLDSGSFWLS--LTPTEPSIHPEAAYSR 110 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V +++ ++ + + + L D I + Sbjct: 111 LCVWAVLQEKKNPPFLAITT-------HLDNISEMARFEGMKVILEQLADQIERY----- 158 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---LRNKIPIDYF 260 P ++ GD N + + + + + + IDY Sbjct: 159 PVLLMGDLNAEPTERVHRYLEQHFQNAKEHGQKPHHGPKGSYQNFIYTLPWQELEEIDYI 218 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + F+ + + SDH P+ + F Sbjct: 219 Y----------TKGFTVVKTACLTDSCDRRFPSDHFPLEAEVQF 252 >gi|325696280|gb|EGD38171.1| exodeoxyribonuclease [Streptococcus sanguinis SK160] gi|332362319|gb|EGJ40119.1| exodeoxyribonuclease [Streptococcus sanguinis SK1056] Length = 322 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 41/325 (12%), Positives = 88/325 (27%), Gaps = 56/325 (17%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 K VL V ++L+SWNI++L+ + + + Q + Sbjct: 28 KSVLNFVIINSVNFTRKGNFMKLISWNIDSLNAALTSDSARAQLS------QAVLQTLQA 81 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 +ADI+ +QE + S R+ + K Sbjct: 82 ENADIIAIQETKLSATGPTKKHLEILTDLFPDYENTWRSSREPARKGYAGTMFLYKKELT 141 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 ++P +GA + G + +E +G +V ++ + + + Sbjct: 142 PTVTFPEIGAPSTMDVEGR----IITLEFDG--FFVTQVYTPNAGDGLKRLDDRQVWDAK 195 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWKTI 228 ++ L + P + GD+N R + + + Sbjct: 196 YAEYLATL--------DEQKPVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNL 247 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEI 278 F N + IDY++ + + + Sbjct: 248 LAKGFTDTFRHLHGDIPNQYTWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDS 307 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303 + DH PI ++ + Sbjct: 308 GARQ-----------DHTPIVMEIE 321 >gi|307317812|ref|ZP_07597250.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti AK83] gi|306896574|gb|EFN27322.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti AK83] Length = 285 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 38/283 (13%), Positives = 78/283 (27%), Gaps = 53/283 (18%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAV 80 + + S+NI+ +G D + Q + ADIV LQE Sbjct: 33 GDIVIASYNIHKCVGTDGRF-----------DPPRIAQVIAEIGADIVALQEADQRFGER 81 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 A + + + + H + + ++ + L G Sbjct: 82 AGLLDLEHLRREAHLVSVPISPFSEKGHGWHGNVLLIREGAVSDVRQLKLPG-------V 134 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R A+ + +++ + V+ HL ++QA+ L Sbjct: 135 EPRGALVVDLDLKAGPLRVIAAHLGLLRHS-------------RARQAETLLK--ATADG 179 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 + P ++ GD N + L S + + +P+D Sbjct: 180 AGRPTLLIGDLN---------EWRMGKRSSLSFLSPIFDPSHSAVASFPSRFPLLPLDRV 230 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + + + SDH P+ D Sbjct: 231 LGNPHHLVTSVAV----------HDTPLARVASDHLPVKASID 263 >gi|296130666|ref|YP_003637916.1| Endonuclease/exonuclease/phosphatase [Cellulomonas flavigena DSM 20109] gi|296022481|gb|ADG75717.1| Endonuclease/exonuclease/phosphatase [Cellulomonas flavigena DSM 20109] Length = 260 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 71/304 (23%), Gaps = 80/304 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78 +RL ++NI D + LDAD++ LQE+ Sbjct: 1 MRLATFNILHGRSLADG----------RVDLDRFADAVRRLDADVLALQEVDRAQSRSHG 50 Query: 79 -----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDI----HTAIAVRKKNVRVLQQSYP 129 A + + + IA+ + Sbjct: 51 ADLTAVAADAMGAPHHRFAATLHGEPGLWVAGTGQEQPDTAAYGIALLSRRPVREWHVVA 110 Query: 130 LLGAKDS------------FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 L + F R R A+ +V+ G + V+ HL + Sbjct: 111 LPALRRRTPVRFPGQRWPAFVRDEPRAALAAVVDGEGGPLTVVGTHLTFIPGWN------ 164 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + L+ + + V+ GD N + Sbjct: 165 ----------VRQLRHLVRTTRRLPGACVVMGDLN---------------LAGEQPARLT 199 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + R +D+ + ++ + LSDH Sbjct: 200 GMQPLVRAATFPVDAPVRQLDHVLAGPG-------------VHAAGPGDAVDLGLSDHRA 246 Query: 298 ISID 301 + +D Sbjct: 247 LVVD 250 >gi|126322197|ref|XP_001375523.1| PREDICTED: similar to TRAF and TNF receptor associated protein, [Monodelphis domestica] Length = 355 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 85/288 (29%), Gaps = 48/288 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L++WNI+ L + + +Y D+VFLQE+ Sbjct: 106 TFSLITWNIDGLDINN-----------LQARARSVCEYLALYTPDVVFLQEV-------- 146 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + + T + ++K V+++ A Sbjct: 147 ---IPPYYDYLKKRATSYRIISGNEDGYFTVVMLKKSRVKLMSHEITPFPAT-----QMM 198 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + V + G ++ ++ HL+S Q + + + + Sbjct: 199 RNLLCVHVSVCGNELCLMSSHLEST----------RNHSRERMNQLKIVLKKMQE-IPES 247 Query: 203 VPFVIAGDFNRKINY-------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 V + GD N + + D W+ + + R+ + + N K+ Sbjct: 248 VTVIFGGDTNLRDHEVSKVGGLPDKILDVWEFLGKPE-HCRYTWDTQANTNLAIEASCKL 306 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D A I + + G+ SDH + +D Sbjct: 307 RFDRIFFRPAAGDCHI--IPRNLDLIGLEKLDCGRFPSDHWGLLCGFD 352 >gi|145544246|ref|XP_001457808.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124425626|emb|CAK90411.1| unnamed protein product [Paramecium tetraurelia] Length = 239 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 38/279 (13%), Positives = 70/279 (25%), Gaps = 48/279 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NI + + +L+ + L+AD++ LQE+ Sbjct: 1 MRIATYNIRN------------TQDQYLKRREILQSIIQGLNADVISLQEVALPEL--DY 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + F + AI VRK L + + R Sbjct: 47 LAGDYQKFFAPIQLQFPLHPDPEFRIDGNAILVRKGLEVKLHEYVHISVF---------R 97 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +++ + + + HL D + S Q + ++ + Sbjct: 98 NIQHIVI----GDVHIYNTHLHHVIGDD----------QVRSHQIDNILTYLLGQM--NE 141 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR---CNANKNLRNKIPIDYF 260 + GDFN + E + DY Sbjct: 142 RIFLMGDFNLTPESQEYKKMTHYFKSSYTLANQKEPEITFPTGLTGPFMDTDPAGTFDYI 201 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + N E D G SDH I Sbjct: 202 WIRGN------NIEVKECTLFGSDKIQEGVYPSDHLGIL 234 >gi|19553934|ref|NP_601936.1| exonuclease III [Corynebacterium glutamicum ATCC 13032] gi|62391577|ref|YP_226979.1| exodeoxyribonuclease III [Corynebacterium glutamicum ATCC 13032] gi|145296740|ref|YP_001139561.1| hypothetical protein cgR_2644 [Corynebacterium glutamicum R] gi|21325513|dbj|BAC00135.1| Exonuclease III [Corynebacterium glutamicum ATCC 13032] gi|41326919|emb|CAF20763.1| EXODEOXYRIBONUCLEASE III [Corynebacterium glutamicum ATCC 13032] gi|140846660|dbj|BAF55659.1| hypothetical protein [Corynebacterium glutamicum R] Length = 263 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 33/300 (11%), Positives = 78/300 (26%), Gaps = 60/300 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+V+WN+N + + + D D++ +QE + Sbjct: 1 MRIVNWNVN----------------SARTRVDRMVDFLLRHDVDVLAVQETKCKDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 I + + +A+ + +++ + + Sbjct: 41 ------QFPTERFTEIGYEVAHFGLNQWNGVAIISRVGIENVETHFPAQPGFNKDITKEQ 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KES 201 + + V +++ + + Y + L++++ Sbjct: 95 SIEARAIGARCGGVQVWSLYVPNGREIADPHYDYK------LRWLFSLRNYVIDTLEYRP 148 Query: 202 LVPFVIAGDFNRKINYLGNNDDFW----------KTIDPNDSLIRFPKEKDSRCNANKNL 251 V+ GDFN + D + + + KE Sbjct: 149 EEKLVLLGDFNIAPTDIDVWDIAAFEGKTHVTEPERAAFDGLIEAGLKETTPGPGTYTYW 208 Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 K + ID+ + + D + G SDH P+ +DY Sbjct: 209 DYKGARFLKGEGMRIDFQLASPALA-------ATAGETFVDVEERSGTGASDHAPVIVDY 261 >gi|289549078|ref|YP_003474066.1| exodeoxyribonuclease III Xth [Thermocrinis albus DSM 14484] gi|289182695|gb|ADC89939.1| exodeoxyribonuclease III Xth [Thermocrinis albus DSM 14484] Length = 261 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 78/304 (25%), Gaps = 71/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 R+ ++N+N S LL + + D++ LQE Sbjct: 4 FRVCTYNVN----------------SIRSRRELLFMWLERSQVDVICLQETKVEERA--- 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + I + + +A+ K +R Sbjct: 45 -------FPFPDFEKIGYHCYVKGQRTYNGVAICSKLPLQDV----FKDTSMDILDKESR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + IW+++++ + + TY + Q ++ + Sbjct: 94 I-----IGGRLGDIWLINVYFPHGDLRGTPKFTYKLAFYQQFYQ------FLAENFSPED 142 Query: 204 PFVIAGDFNRKINYLGNNDDFW---------------KTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N + + D + I + F + Sbjct: 143 KIILLGDMNVALEDIDVYDPVLLRDTIGTMEEERSALRKILEWGFVDTF-RYLYPNKVQF 201 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDY ++ + S ++ + K R + SDH P+ Sbjct: 202 TWWDYIGGAVWKDQGMRIDYILVTKPLLP-----SVRDVYVDMWARKRRSPKPSDHAPVV 256 Query: 300 IDYD 303 + Sbjct: 257 CLLE 260 >gi|55823454|ref|YP_141895.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus CNRZ1066] gi|55739439|gb|AAV63080.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus CNRZ1066] Length = 275 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 82/305 (26%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + R + +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTGDSARAQLSR------AVIDTLVTENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + S + + K +YP +GA + G Sbjct: 55 KHLQILEDYFPDYVITWRSSVEPARKGYAGTMFLYKKELTPVITYPEIGAPSTMDCEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V ++ + + L ++ Sbjct: 114 -----IITLEFDTFFVTQVYTPNAGDGLKRLLERQIWDEKYADYLAEL--------DAQK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + + A Sbjct: 161 PVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERAGFTNLLNKGFTDTYRHLNGDVTGAY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ +I+ + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVIKSNMIDSGDRQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 VLEID 274 >gi|311106414|ref|YP_003979267.1| endonuclease/exonuclease/phosphatase family protein 1 [Achromobacter xylosoxidans A8] gi|310761103|gb|ADP16552.1| endonuclease/exonuclease/phosphatase family protein 1 [Achromobacter xylosoxidans A8] Length = 255 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 35/255 (13%), Positives = 71/255 (27%), Gaps = 39/255 (15%) Query: 54 YTLLRQYAKNLDADIVFLQEM----GSYNAVAKVFPKNTWCIFYSTERLIN--HSKRDSN 107 LR+ + DIVFLQE+ + + +P + F + + + + Sbjct: 32 LHELREALRLASPDIVFLQEVLGEHQGHAERHQAWPALSQYEFLADSLWTDFAYGRNAVY 91 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 H A+ + +++ + R + ++ + V I + Sbjct: 92 PAGHHGNALLSRYPIERHENHDVTVHGH-----EGRGLLHCVLRVPSLPSPVHAICVHLG 146 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 +Q + L + +T + P +IAGDFN Sbjct: 147 LLEG-----------HRGKQLRRLCELVTDGVPADEPLLIAGDFNDWRLRAD------AL 189 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + + F + +D + + + Sbjct: 190 MTGCGTREVFTTRLGRPARTFPARWPLLRLDRIYVRNVRDWQPVPLASRV---------- 239 Query: 288 RGKRLSDHCPISIDY 302 RLSDH PI + Sbjct: 240 -WSRLSDHVPICAEI 253 >gi|296116318|ref|ZP_06834934.1| exodeoxyribonuclease III Xth [Gluconacetobacter hansenii ATCC 23769] gi|295977137|gb|EFG83899.1| exodeoxyribonuclease III Xth [Gluconacetobacter hansenii ATCC 23769] Length = 264 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 78/304 (25%), Gaps = 67/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++WNIN+L + + DIV LQE + Sbjct: 1 MRIMTWNINSLRLRLPLLERL----------------CAENQPDIVCLQE---TKVTDDL 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + +A+ + + P + Sbjct: 42 FPLDAVQALGFPHVC------FRGMKSYNGVAILSRQPMRMLTDTPDWCDRGDCRH---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + V D ++ + + +P + + + W Q+ Sbjct: 92 --IAVECGEGTDAVTVHDFYVPAGGDIPDPVE--NPKFAHKLAFVEEARAWFAQRDVCRT 147 Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID-------------PNDSLIRFPKEKDSRCNAN 248 V GD N + + ++ K + + + + Sbjct: 148 VVV--GDLNIAPLEHDVWSHRQLLKIVSHTPEETSRLLAWQNSGFVDAMRHFVPADEKLY 205 Query: 249 KNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +D+ + + L S ++ SDH P+ Sbjct: 206 TWWSYRNRDWSASNRGRRLDHVWVTPDLVPALRDMSV-------LRPVRDWEKPSDHVPV 258 Query: 299 SIDY 302 +D Sbjct: 259 IVDL 262 >gi|227821604|ref|YP_002825574.1| putative endonuclease/exonuclease/phosphatase family protein [Sinorhizobium fredii NGR234] gi|227340603|gb|ACP24821.1| putative endonuclease/exonuclease/phosphatase family protein [Sinorhizobium fredii NGR234] Length = 285 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 37/283 (13%), Positives = 81/283 (28%), Gaps = 53/283 (18%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAV 80 + + S+NI+ +G D + Q + ADIV LQE Sbjct: 33 GDIVIASYNIHKCVGTDGRF-----------DPGRIAQVIGEIGADIVALQEADQRFGER 81 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 A + + + + + H + + ++ + L G Sbjct: 82 AGLLDLEHLRREAHLVSVPISAFSEKGHGWHGNVLLLREGAVSDVRQLNLPG-------V 134 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R A+ + +++ + V+ HL ++QA+ + Sbjct: 135 EPRGALVVDLDLKAGPLRVIAAHLGLLRHS-------------RARQAETILRVAAD--G 179 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 + P ++ GD N + L + + + +P+D Sbjct: 180 AGRPTLLIGDLN---------EWRMGRRSSLSFLSPIFDPTHATVASFPSRFPLLPLDRV 230 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + + S + + SDH P+ D Sbjct: 231 LGNPHHL--VTSVSVHDTPL--------ARVASDHLPVKASID 263 >gi|89074807|ref|ZP_01161261.1| putative exported phosphatase [Photobacterium sp. SKA34] gi|89049382|gb|EAR54944.1| putative exported phosphatase [Photobacterium sp. SKA34] Length = 342 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 98/354 (27%), Gaps = 72/354 (20%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 K+V+ F V + AQ++ ++SWN Q+G + + Sbjct: 7 KHVITAALFSVSTFSIQAQELSVMSWNSWVGPTQDGF---------SKKHAKRVAHDVAA 57 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-------------I 110 + D+ E + + + S RD++ Sbjct: 58 IKPDVYVSIETYGKGHLLRKAFAKAHHVNTDDIYYYTISCRDNDGKPTFQGMCKEGIHGD 117 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 + AI V V + + G + +++NG+ +WV+D L S Sbjct: 118 NLAIMSIYPIVDVKVVRDAIEYPHVNDWNFG-----AVKLDVNGQFVWVVDTWLDSANSS 172 Query: 171 DSLENTYSPSCSL------------------LSQQAQWL-KDWITQKKES--LVPFVIAG 209 +S+ + + QA+ + + WI + + P ++AG Sbjct: 173 ESILDDLYEAARHDGSIDNEKIVQIIQRDKVRLNQAREIVEQWIPELIANADQEPVILAG 232 Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-------------CNANKNLRN--- 253 D N + + + + K+ Sbjct: 233 DHNTSPRLDWSPKNKDMHFGITIPYQVSKIFTKAGFKDAFREMHPNVLTHTGKSWSPQGG 292 Query: 254 ---KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY + + L + I + + SDH + + F Sbjct: 293 DIAPNRIDYIYYKGSKLQALESVTIDSIAAGTTNDTT-----SDHSAVFARFKF 341 >gi|116747688|ref|YP_844375.1| endonuclease/exonuclease/phosphatase [Syntrophobacter fumaroxidans MPOB] gi|116696752|gb|ABK15940.1| Endonuclease/exonuclease/phosphatase [Syntrophobacter fumaroxidans MPOB] Length = 258 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 82/285 (28%), Gaps = 53/285 (18%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + S+N + + D + + LDADI+ LQE+ + Sbjct: 11 PNEASFTVASYNTHRCVGIDR-----------KYDPERTARVIRELDADIIGLQEIDAGF 59 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 ++ + + +T + + H + V + L S Sbjct: 60 YRSQGSRQLE-RLADATGLNVVNGPTKRGTGGHYGNVLLTSRKVVGVRRIDL-----SVY 113 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R A+++ ++++G+ + V+ +HL +Q L Sbjct: 114 GREPRGAIDVDLDVDGEIVRVMVVHLGLGGL-------------ERRRQVNRLLH--GCS 158 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 E V+ GD N W + + K + + +D Sbjct: 159 SEQEQLHVVLGDINE-----------WFPLGRPLHRLHRHFGKSPARRTFPSFLPVLALD 207 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + L++ S + + + + SDH PI Sbjct: 208 RIWVKP--LDALMEISVHDTVLS--------RVASDHLPIKATIT 242 >gi|328853940|gb|EGG03075.1| hypothetical protein MELLADRAFT_109522 [Melampsora larici-populina 98AG31] Length = 267 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 25/213 (11%), Positives = 58/213 (27%), Gaps = 24/213 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L ++NI L + ++ L+ + DI+ QE+ + + + Sbjct: 10 LKLATYNIRYSPTNSHPILPEAP---WSTRLPLILNQLNWEEPDIIGAQEVLDHQFIDLL 66 Query: 84 --FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + + P + S+ Sbjct: 67 EGLHQLGYTGIGVGRDDGKRLGEYAPIFWKSDQFELVDHHYFWLSEEPDVPGSISWDSGQ 126 Query: 142 NRRAVELLVEINGKKIWVL-------------DIHLKSFCFLDSLENTYSPSCSLLSQQA 188 R + ++ + V I + + F D S L+ +A Sbjct: 127 TRMVTCVELKPKLNTVQVDGIFQLPGQNSLDRSIFVMNTHFDDRGSYAREQSAKLICYRA 186 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 + L ++ P + GD N L Sbjct: 187 EALIK------KTSKPVFLLGDLNSTPEELPYK 213 >gi|23335380|ref|ZP_00120616.1| COG0708: Exonuclease III [Bifidobacterium longum DJO10A] gi|189439121|ref|YP_001954202.1| exonuclease III [Bifidobacterium longum DJO10A] gi|239621234|ref|ZP_04664265.1| exodeoxyribonuclease III [Bifidobacterium longum subsp. infantis CCUG 52486] gi|189427556|gb|ACD97704.1| Exonuclease III [Bifidobacterium longum DJO10A] gi|239515695|gb|EEQ55562.1| exodeoxyribonuclease III [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 286 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 34/311 (10%), Positives = 79/311 (25%), Gaps = 57/311 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VA 81 + + + N+N + + + +A D+ +QE+ + V Sbjct: 2 TITITTSNVNGIRA---------------AKRKGIEDWAGKHAPDVWCIQEVRAPQDDVD 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRD----SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +F + + + + + + + + ++ ++D Sbjct: 47 SIFDEFGFEYATAGKIEAPANLHAMNEVCRVKGRAGVGLLTDLEVLDKRYGLPGLSEDVD 106 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 S R + G I V +++ + L + + + Sbjct: 107 S---GRWIETDVKTPEGYAITVASVYVHAG--NTDYPTKMEQKYRFLDTMLKRMGALRDE 161 Query: 198 KKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEK 241 V+ GDFN K +D + + Sbjct: 162 AAHGGKQAVLCGDFNIAHTPLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLA 221 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + IDY + + + D + KR Sbjct: 222 GDIQGPYTWWSQRGRAFDNNVGWRIDYQFATPELAE-------TARGFVIDKAPTYDKRW 274 Query: 293 SDHCPISIDYD 303 SDH P++I Y+ Sbjct: 275 SDHAPLTITYE 285 >gi|307566413|ref|ZP_07628850.1| exodeoxyribonuclease III [Prevotella amnii CRIS 21A-A] gi|307344885|gb|EFN90285.1| exodeoxyribonuclease III [Prevotella amnii CRIS 21A-A] Length = 249 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 33/302 (10%), Positives = 78/302 (25%), Gaps = 77/302 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L G + + LDAD LQE Sbjct: 1 MKFISWNVNGLRACVGKNFK---------------EEFLALDADFFCLQETKMQEG-QLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ ++ ++ A+ K+ + + D R Sbjct: 45 LSFPGYESYWN----------YADKKGYSGTAIFTKHTPLSVSRGIGIEEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + Q + ++ + Sbjct: 91 -----VITLEMADFYLVTVYTPN-------SQDQLKRLPYRMQWETDFQSYL-HSLDKHK 137 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249 P ++ GD N + + + + + Sbjct: 138 PVIVCGDMNVAHEEIDLKNPKSNHFNAGFSDEEREKMTTLLSNGFTDTFRFLYPEQVTYS 197 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF++ + L + + SDHCP+ I Sbjct: 198 WWSYRFKAREKNIGWRIDYFLISDRLRESLEEAKIHTEIL-----------GSDHCPVEI 246 Query: 301 DY 302 Sbjct: 247 IL 248 >gi|291234349|ref|XP_002737107.1| PREDICTED: deoxyribonuclease I-like 3-like [Saccoglossus kowalevskii] Length = 446 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 88/305 (28%), Gaps = 31/305 (10%) Query: 4 KYVLALVFFLVPCTASVA-QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 VL L++ T + +RL ++N+ +L++ Sbjct: 11 CLVLVLLYMATGHTKGSEIKDLRLSAFNVQVFG---------QMKASDPLVMDVLKKIIL 61 Query: 63 NLDADIVFLQEMGS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 D++ +QE+ A+ ++ + I+ +++ A R + Sbjct: 62 RN--DVILIQEIRDSSETAILRLLAEINRASDNKYSIEISDRLGRTHSKEQYAFFYRTDS 119 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 V + + + G + + + R + + + D + Sbjct: 120 VNMTESYHYDDGEEQNGTDEFEREPFIVRFSSPSTAVSDFVMVAIHTKPDD--------A 171 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + D +++ +I GDFN +Y+ + D + + + + Sbjct: 172 VKEIDYLTDVYDDIVSRWNIED--VIILGDFNAGCDYVKSKDWNYIRLRTDKRFTWLIDD 229 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 ++ A+ D V+ + D + +SDH P Sbjct: 230 REDTTVASTFCAY----DRIVIGGTTLEGAVWPKSSRVLYFDEKFDLTDDQAAAVSDHYP 285 Query: 298 ISIDY 302 + Sbjct: 286 VEFKL 290 >gi|282897774|ref|ZP_06305773.1| hypothetical protein CRD_01893 [Raphidiopsis brookii D9] gi|281197453|gb|EFA72350.1| hypothetical protein CRD_01893 [Raphidiopsis brookii D9] Length = 257 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 32/282 (11%), Positives = 66/282 (23%), Gaps = 34/282 (12%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ ++++N+ G W + +N ++ QE + Sbjct: 2 QITVMTFNLRCDKPDPGERCW-------QKRVGAIACMIQNYQPELWGTQEGQPHQLRDL 54 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + +R ++ P + ++ Sbjct: 55 QVLLPDYEFVG-GDRTGTGKGEHCAIFYKRGKLQLRETQDFYLSDTPEIPGSITWGTRLP 113 Query: 143 RRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + G + +++ HL S L++ + Sbjct: 114 RMVTWANFMVEDLGFSVTIMNTHLDHEVSRARELGAGLVSLRLMNFPME----------- 162 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 ++ GDFN L D L P E + D Sbjct: 163 --DYLLLTGDFNAGPKSL-ERIILADNYRIRDVLGNLPLESQKTFHDFTGQAWDAR-DTI 218 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D + DD + G SDH P+ + Sbjct: 219 YCDHR---------WQINHVIIDDQRWEGIWPSDHFPVIVKL 251 >gi|229083666|ref|ZP_04215990.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44] gi|228699629|gb|EEL52290.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44] Length = 263 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 70/269 (26%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF------------YSTERLI 99 L + + D D++ LQE+ V F ++ Sbjct: 18 EKIRHLAKTIQEEDYDVIALQEVSQSIKAQNVCDNKKKDNFGLILLTELEKLGLGNYNIV 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + IA+ K V Q S+ + ++D+ R+ V + GK I Sbjct: 78 WDFSHIGYDIYEEGIAIITKYPIVKQGSFFVSASQDTTYWK-TRKIVHATISYQGKNITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L +++ + GDFN + G Sbjct: 137 YSCHLGW----------WNDEEESFKGQVNRLIEYVN----GDELSFLMGDFNNNAHLRG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 D+ D+ ++ + K ID Sbjct: 183 EGYDYLIRKGLYDTYELAMEKDEGTTVQGKIAGWDENKQNLRIDLIF---------TNRP 233 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +SDH + + D Sbjct: 234 KKVLSSKVIFNGVNRNVISDHFGVEVQLD 262 >gi|229820609|ref|YP_002882135.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM 12333] gi|229566522|gb|ACQ80373.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM 12333] Length = 382 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 26/267 (9%), Positives = 78/267 (29%), Gaps = 31/267 (11%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 + + ++DAD++ + E A+ + + + + + +R I Sbjct: 129 IRMTARVVHDVDADVLAVIEAEDRPALLRFDAELLGDHYRHLMLVDGNDER----GIDVG 184 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 + + S+ + +D+ +R + V + + ++ Sbjct: 185 LLTKPGFPIGAIHSH--VDTEDAVGLVFSRDCAQYEVTTPSGTVIQVLVNHF-------- 234 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 ++ +QA+ ++ + + V+ GD N +G + +D Sbjct: 235 KSQSGGGGERRRRQAEAVRAIVDELVAVGEHVVVLGDLNEGSPAVGQVPVSLAALFESDG 294 Query: 234 -----LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY-------- 280 + R + + +DY ++ + Sbjct: 295 PLVSCFDLDGFDVGPRPGTFDSCGIRNRLDYILLSRGLAARFTSGRVFRTGLWGTRVTRP 354 Query: 281 ----NEDDIKSRGKRLSDHCPISIDYD 303 ++ + + SDH + ++ D Sbjct: 355 TAWETYPEMLTGTHQASDHAALVVELD 381 >gi|88608769|ref|YP_506301.1| exodeoxyribonuclease III [Neorickettsia sennetsu str. Miyayama] gi|88600938|gb|ABD46406.1| exodeoxyribonuclease III [Neorickettsia sennetsu str. Miyayama] Length = 265 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 31/305 (10%), Positives = 76/305 (24%), Gaps = 73/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N + + + D++ LQE+ + Sbjct: 7 LKVATWNVN----------------SIRQRAEAVSALLVSENLDVLLLQELKCQES---- 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++++ + +A+ + + + + Sbjct: 47 ------DFPLHVFNDLSYNVILKCQKGYNGVAIASRWPITKISDEIYMDGEARY------ 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E ++ K I ++ I++ + S Y Q L I + Sbjct: 95 --IEGVISFFDKCIRLISIYIPNAQAAGSPRFEYK------MQFHDALARRIHGYLLNNN 146 Query: 204 PFVIAG-DFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247 ++ G D N + D + + F + K Sbjct: 147 DIMLLGGDMNAAPEDIDVYDPVKLDGCTGFHIEERSKLRELLNLGLFDTF-RMKYPTKQE 205 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + ID+ + L+ R SDH P+ Sbjct: 206 FSWWDYRGGGLQRNEGMRIDHILASAEGMDHLLDCYI-------LKELRHISRPSDHVPV 258 Query: 299 SIDYD 303 + Sbjct: 259 VCVLN 263 >gi|305666045|ref|YP_003862332.1| hypothetical protein FB2170_07175 [Maribacter sp. HTCC2170] gi|88710820|gb|EAR03052.1| hypothetical protein FB2170_07175 [Maribacter sp. HTCC2170] Length = 332 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 86/319 (26%), Gaps = 50/319 (15%) Query: 25 RLVSWNINTLSE--QEGVSLWKNSVK---------RTTSDYTLLRQYAKNLD-------A 66 + +N+ L + + ++ + R + + + Sbjct: 14 TIAFYNVENLFDIENDSLTFDDDRTPNGKDKWTQTRYLQKIENISKVLSRIGSVTSKTSP 73 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK-KNVRVLQ 125 DI+ L E+ + + + I H + I A+ +K + Sbjct: 74 DIIGLCEIENITVIEDLINHPN---LRDKNYGIVHFDSPDESGIDVALIYKKGSFLPTTF 130 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 QS LL + R R + + ++ ++I+ + H S ++ + + L+ Sbjct: 131 QSRRLLLQNEDGDRDYTRDQLVVGGLLDDEQIYCIVNHWPSRSGGETRSKPNRIAAAKLN 190 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG-----NNDDFWKTIDPNDSLIRFPKE 240 + + D I + +S + GD N K ++ K Sbjct: 191 ---KRIIDSIQRM-DSSAKIISMGDLNDDPIDDSLKKILKTKGKKKKLEDQSLFNPMEKL 246 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKF-------------------LIQESFSEILYN 281 + + D N + + + + Sbjct: 247 YNKGVGSLAYRDKWNLFDQIFFTANLLEKKDDSYRFWKVNAFTAPFLYTKKGKYKGYPFR 306 Query: 282 EDDIKSRGKRLSDHCPISI 300 S SDH PI + Sbjct: 307 TYAGGSYLGGYSDHLPIYM 325 >gi|302388430|ref|YP_003824252.1| exodeoxyribonuclease III [Clostridium saccharolyticum WM1] gi|302199058|gb|ADL06629.1| exodeoxyribonuclease III [Clostridium saccharolyticum WM1] Length = 251 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 34/302 (11%), Positives = 74/302 (24%), Gaps = 78/302 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +++SWN+N L Y K +DAD+ +QE Sbjct: 3 KMISWNVNGLRACVEKGF---------------LDYFKEMDADVFCIQESKLQEG-QIDL 46 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + +++ +S PL A + +R Sbjct: 47 TLPGYHQYWNYAEKKGYSGTALFTKEK-----------------PLSVAYGINAEEHDRE 89 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + E + +V+ + + + ++ + E P Sbjct: 90 GRVIAAEYP--EYYVVTCYTPN-------SQNELARLPYRLTWEDAVLAYLKK-LEEKKP 139 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + GD N + + + + + + + Sbjct: 140 VIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEEREKFTVLLESGFIDTYRYFYPEQEGIYS 199 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF + ++ L + + SDHCP+ + Sbjct: 200 WWSYRFSARKKNAGWRIDYFCVSESLKDRLASAAIHTEVL-----------GSDHCPVEL 248 Query: 301 DY 302 Sbjct: 249 VI 250 >gi|294102135|ref|YP_003553993.1| Endonuclease/exonuclease/phosphatase [Aminobacterium colombiense DSM 12261] gi|293617115|gb|ADE57269.1| Endonuclease/exonuclease/phosphatase [Aminobacterium colombiense DSM 12261] Length = 359 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 83/305 (27%), Gaps = 39/305 (12%) Query: 3 RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 VLA+VF + AS A + + ++NI + + + + L + Sbjct: 1 MTSVLAVVFLSI---ASQAMALSIGTFNIEYFNVSGKNAYSPS-------HCSSLAKTIT 50 Query: 63 NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 A+++ LQE+ + K Y+ D T + + Sbjct: 51 TSQANVLALQEIEGDATMRFFVTKFLPGWKYAGNDTGGRQNLYFLWDTATIKLLDGPSAY 110 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFC--FLDSLENTYS 178 S+ G + R + + ++ ++++HLKS D E Sbjct: 111 GANASFRFEGKSYRLND---RPHLVGTFLDKEGNRRFTLVNVHLKSQSIRGKDDKERAER 167 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + Q + +T K P I GD+N N Sbjct: 168 YNKAKRQAQIAGINKLVTTLKG---PVFILGDYNT-----------------NTPSGTSF 207 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +DY N K + + DH + Sbjct: 208 PLSGLGEGHYSYDNMNSNLDYIGFT-NVGKTASWTLYKVETAIASRSTKSTQHP-DHDIV 265 Query: 299 SIDYD 303 + D Sbjct: 266 VLSLD 270 >gi|289614581|emb|CBI58653.1| unnamed protein product [Sordaria macrospora] Length = 626 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 35/337 (10%), Positives = 89/337 (26%), Gaps = 75/337 (22%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQE 73 ++ + + + ++N+ L+ T++ + D++F+QE Sbjct: 290 VSSGTCKGLTVGTYNVENLAP-------------TSAHMPKVASQIVTYLKSPDLLFIQE 336 Query: 74 MGSYNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + K T+ + E + + +I TA Sbjct: 337 VQDDTGATDDGVVSANKTLTTLISAIKTAGGPTYDFV-TIEPVNDQDGGQPGGNIRTAYL 395 Query: 116 VRKKNVRVLQQS---------------------------YPLLGAKDSFSRAGNRRAVEL 148 + + ++ P + + R+ + Sbjct: 396 YNPSVLTLSLKNGGSNPGSSTDANEVLIDSLTGAPSLKYNPGRIDPSNAAWEATRKPLVA 455 Query: 149 LV--EINGKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKESL 202 + K + +++H S S+ P + ++QA+ +I++ ++ Sbjct: 456 EWIAKDGSKSFFTVNVHFSSKGGGTSVHGDVRPPINGAVEKRTEQAEITAKFISKILKAD 515 Query: 203 --VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 + AGDFN + ++ L N +D+ Sbjct: 516 PAARVIAAGDFNEFAFVKPL--TTFASVSGLKELDEALNTPVENRYTYSYDMNAQALDHM 573 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + + +SDH P Sbjct: 574 YISPVLASSKSKFQHVH----VSSWVAASAVVSDHDP 606 >gi|319902391|ref|YP_004162119.1| exodeoxyribonuclease III Xth [Bacteroides helcogenes P 36-108] gi|319417422|gb|ADV44533.1| exodeoxyribonuclease III Xth [Bacteroides helcogenes P 36-108] Length = 267 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 30/303 (9%), Positives = 82/303 (27%), Gaps = 73/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+N L ++ D++ LQE Sbjct: 14 MKIITYNVNGLRAAVTKGFP---------------EWLAQEQPDVLCLQETK-------- 50 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + H + ++ +A+ K + + DS R Sbjct: 51 LQPEQYPADALDSLGYKHYLYSARKKGYSGVAILAKREPDRVEYGMGMEEYDSEGRF--- 107 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + ++ ++ S D + + + ++++ + + + Sbjct: 108 ------LRADYDDLSIVSVYHPSGTSGDERQ-------AFKMVWLEKFQEYVLELQRTRP 154 Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GD+N + +D W T + + Sbjct: 155 KLILCGDYNICHEPIDIHDPIRNATNSGFLPEEREWMTRFLDAGFTDSFRFLHPDKQEYT 214 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY ++++ L + SDHCP+ + Sbjct: 215 WWSYRFNSRARNKGWRIDYCMVNEPVRPMLKDARILNDAVH-----------SDHCPMLL 263 Query: 301 DYD 303 + Sbjct: 264 EIT 266 >gi|307638182|gb|ADN80632.1| Exo deoxyribonuclease III [Helicobacter pylori 908] gi|325996778|gb|ADZ52183.1| Exodeoxyribonuclease III [Helicobacter pylori 2018] gi|325998370|gb|ADZ50578.1| Exodeoxyribonuclease III [Helicobacter pylori 2017] Length = 250 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 81/303 (26%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++DAD+ +QE + + + Sbjct: 1 MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + + D R Sbjct: 42 QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGIDMEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++++++ + S + + + L+ Sbjct: 91 -----VITCEFESFYLVNVYTPNSQQALSRLSYRMSWEMEFKKFLKVLEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERKKFNELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKDIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|302783529|ref|XP_002973537.1| hypothetical protein SELMODRAFT_99746 [Selaginella moellendorffii] gi|300158575|gb|EFJ25197.1| hypothetical protein SELMODRAFT_99746 [Selaginella moellendorffii] Length = 306 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 91/310 (29%), Gaps = 65/310 (20%) Query: 15 PCTASVAQKV-RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 P + + + +++SWN+N L + + L + A + D D++ LQE Sbjct: 28 PSSLPSEKNLVKVISWNVNGLRA------CMKRKNELEEEGSALARLADSEDFDVLCLQE 81 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + + ++ ++ ++ A+ + + + Sbjct: 82 TKLQEKDVEAIKQKILGGYSNSFWT-----CSTSKLGYSGCALISRIKPLSVTYGLGISQ 136 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLK 192 D R +V +++ +++ + L+ L + S L+ Sbjct: 137 HDGEGR---------VVTAEFDTFFLVSVYVPNSGQRLERLTYRTTEWDPAFSTYLLELE 187 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRF 237 P ++ GD N + D ++T + L+ Sbjct: 188 KR--------KPVIVTGDLNCAHEEIDIYDPDGNKRSAGFTSEERTSFQTNFIDKGLVDT 239 Query: 238 PKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 +++ + +DYF++ Q + D Sbjct: 240 FRKQHPLAVGFTYWSYRSNARPQNKGWRLDYFLVSQGLVCSVA-----------DSYVLP 288 Query: 289 GKRLSDHCPI 298 SDHCPI Sbjct: 289 QLDGSDHCPI 298 >gi|294102589|ref|YP_003554447.1| exodeoxyribonuclease III [Aminobacterium colombiense DSM 12261] gi|293617569|gb|ADE57723.1| exodeoxyribonuclease III [Aminobacterium colombiense DSM 12261] Length = 261 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 31/300 (10%), Positives = 78/300 (26%), Gaps = 71/300 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N S +L Q+ + D++ LQE + + Sbjct: 2 LKIATFNVN----------------SVRSRMHILSQWLHDNRVDVLCLQETKTEDQF--- 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + + + +A+ + + G + + R Sbjct: 43 -------FPASEFEALGYEAVFKGEKAYNGVALLSLHPIMNPHFGLEDGEEPDPATRIVR 95 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + +++ ++ +D + Y + LK ++ Sbjct: 96 GTVL--------GVHIINTYVPQGKSIDHSDYQYK------MRFFDRLKTLFDREYSKAD 141 Query: 204 PFVIAGDFNRKINYLGN------------NDDFWKTIDP--NDSLIRFPKEKDSRCNANK 249 + GD N + ++D K + I ++ Sbjct: 142 DLLWVGDMNVAPTDIDVTNPGNKRDHVCFHEDIKKKFEEIKAWGFIDVFRKYRPGEGEFS 201 Query: 250 NLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ + + D ++ SDH P+ Sbjct: 202 FFDYRVKNALERNIGWRIDHILATSSLAHRSEDCYV-------DRGPRGWEKPSDHAPVV 254 >gi|84498021|ref|ZP_00996818.1| exodeoxyribonuclease III [Janibacter sp. HTCC2649] gi|84381521|gb|EAP97404.1| exodeoxyribonuclease III [Janibacter sp. HTCC2649] Length = 269 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 31/271 (11%), Positives = 70/271 (25%), Gaps = 52/271 (19%) Query: 59 QYAKNLDADIVFLQEMG-SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 ++ AD++ LQE+ S + + V + ++ + +AV Sbjct: 21 EWLAMQHADVIALQEVRASDDQLRDVLAQGGLAQWHVSSAQGRTKGHA-------GVAVL 73 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + + S R +E+ V + V+ ++ + L ++ Sbjct: 74 TRQPPLRVSSDLGPQEFADAGRW-----LEVDVRGPEGPVTVISTYVHTGEALTPKQDEK 128 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-------------- 223 + + + + V+ GD N + + Sbjct: 129 -------FRFLDAVGSRLADLAVNDGYAVLTGDLNICHSADDLKNWKGNVGKAGFLPEEQ 181 Query: 224 --FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQ 272 + + + IDY K Sbjct: 182 AHLDRWVGALAYADVHRALHGPGPGPYTWWSWRGKAFDNDAGWRIDYHFASAPLAKLAT- 240 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +R SDH P+++DYD Sbjct: 241 ------RADVGRASTYAERWSDHAPLTVDYD 265 >gi|325123873|gb|ADY83396.1| catabolite repression control protein [Acinetobacter calcoaceticus PHEA-2] Length = 274 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 82/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +R+VS N+N L L ++ + DAD+V +QE ++ + Sbjct: 14 LRVVSINVNGLRSSVTKG---------------LLEWLEQSDADVVCMQESRITHEQWTE 58 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 F W ++ A+ + V + DS R Sbjct: 59 KFRPEGWHTHLFPAERAGYA----------GTAIYSRLPFVSVKDGLGFELADSQGRF-- 106 Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++ + + ++L S + + + + Q ++ Sbjct: 107 ---ISAEFDLGLSHPVHIASLYLPSGSSGE-------EAQARKDLFLGEYAKILKQWRDE 156 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 +I GD+N + + + I + + + Sbjct: 157 NKSVIICGDYNIVHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDELGYVDTFRVVRTEAE 216 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + I + + SDH P Sbjct: 217 LYSWWSNRGQARAKNVGWRIDYHACSPDWKARTINAWV-----------YKDQWFSDHAP 265 Query: 298 ISIDY 302 + IDY Sbjct: 266 VIIDY 270 >gi|167950326|ref|ZP_02537400.1| exonuclease III [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 272 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 38/312 (12%), Positives = 76/312 (24%), Gaps = 73/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+N N + L+Q + D D++ +QE + Sbjct: 1 MKIVSFNTNGIRT----------------REHQLQQLKQRHDPDVIGIQESKVQD----- 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + H +A+ K + Q G A R Sbjct: 40 -----QDFPLEMTSALGFNAGYFGQKTHYGVALLSKQAPLSLQK----GFPGDPVDAQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + G ++ V+ L + + S S ++ Q Sbjct: 91 MIIGRFATDKGNQVTVIKWLLPAGVRTSLTRSNIRLSASSTPI----CSLYLQQHHSPDD 146 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 ++ GD N L ++ + + F Sbjct: 147 NLLVIGDMNIAPLDLDIGIGPDNAKRWLKSGKCCFLPEEREWLQRLTDWGLHDTFRGHYP 206 Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + ID + + D ++ Sbjct: 207 EVDDRFSWFDYRSRGFDREPKRGLRIDLILASASLNAACSDAGI-------DYEIRGMQK 259 Query: 292 LSDHCPISIDYD 303 SDHCPI ++D Sbjct: 260 PSDHCPIWAEFD 271 >gi|157964331|ref|YP_001499155.1| exodeoxyribonuclease III [Rickettsia massiliae MTU5] gi|157844107|gb|ABV84608.1| Exodeoxyribonuclease III [Rickettsia massiliae MTU5] Length = 292 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 79/306 (25%), Gaps = 72/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V+WNIN+L LLR+ A DI+ LQE +++ Sbjct: 22 MKIVTWNINSL----------------RLRIDLLRKLAYEHQPDIILLQETKVADSL--- 62 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + S + +A+ K S L + R Sbjct: 63 ------FPLEVIKNIGYEHVIYSGQKSYNGVAIISKFPLNNVFSLELYNSDK-------R 109 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ +I +V D + + + + +++W+T + Sbjct: 110 HIAAIVNDIEIHNFYV-------PAGGDIPDIEVNTKFKHKLEYVRLMQEWLTTNRTKND 162 Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 +I GD N + + + + Sbjct: 163 KMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSLLVELQNVLGFIDSSRHFVSLDTKF 222 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + N L + SDH P Sbjct: 223 YTWWSYRNIDWKKSNKGRRLDHIWVSDNLKDAL-------FSMHLLPEARDWSPPSDHVP 275 Query: 298 ISIDYD 303 + ++ Sbjct: 276 YFVTFN 281 >gi|154757658|gb|AAI51788.1| DNASE1L3 protein [Bos taurus] Length = 295 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 41/293 (13%), Positives = 91/293 (31%), Gaps = 32/293 (10%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + A +++ S+N+ + E + + ++ + K DI+ L E+ Sbjct: 14 STHSALALKICSFNVRSFGESKKANCNA---------MDVIVKVIKRC--DIILLMEIKD 62 Query: 77 YN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + + + N+ + + R++ A ++K V V +QSY Sbjct: 63 SSNRICPTLMEKLNGNSRKGITYNYVISSRLGRNTY-KEKYAFLYKEKLVSV-KQSYLYH 120 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + + +R + + + I S + + A Sbjct: 121 DYQAGDADVFSREPFVVWFQSPYTAVKDFVIVPLHTTPET--------SVREIDELADVY 172 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 D + F+ GDFN +Y+ + + + +++ N Sbjct: 173 TDVKRRWNAEN--FIFMGDFNAGCSYVPKKAWKDIRLRTDPKFVWLIGDQEDTTVKNSTN 230 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 I + QN ++ +S + + S K L SDH P+ Sbjct: 231 CAYDRI--VLRGQNIVNSVVPQSNLVFDFQKAYRLSESKALDVSDHFPVEFKL 281 >gi|325954395|ref|YP_004238055.1| exodeoxyribonuclease III Xth [Weeksella virosa DSM 16922] gi|323437013|gb|ADX67477.1| exodeoxyribonuclease III Xth [Weeksella virosa DSM 16922] Length = 255 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 32/301 (10%), Positives = 85/301 (28%), Gaps = 66/301 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+N+N + + L ++ + + DI +QE + + Sbjct: 1 MKIISYNVNGIRA---------------ALRKGLTEWLRVANPDIFCVQETKAQPEQVDI 45 Query: 84 --FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + ++ + + +S + I +G + Sbjct: 46 SEIQALGYTAYWHSAQRKGYSGVAIFSKIQPKNV--------------EIGTGIDYIDHE 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R ++ ++ + V+ ++L S ++ + C + LK I + Sbjct: 92 GR-----VIRLDFDQFSVISLYLPSGTNMEERLDFKLQFCEDFLNYIRNLKQNIPNLVIA 146 Query: 202 LVPFVI---------AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + + D + ID + + + + Sbjct: 147 GDYNICHEAIDIHDPICNAKVSGFLPVERDWMTRFIDQCEMIDSYRFFVKEP-HHYTWWS 205 Query: 253 NK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + IDY ++ + + + SDHCPI ++ + Sbjct: 206 YRANARANNKGWRIDYHMVSHQLKNNIKRVGILTEAKH-----------SDHCPILVELE 254 Query: 304 F 304 F Sbjct: 255 F 255 >gi|288962170|ref|YP_003452465.1| hypothetical protein AZL_d00950 [Azospirillum sp. B510] gi|288914436|dbj|BAI75921.1| hypothetical protein AZL_d00950 [Azospirillum sp. B510] Length = 333 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 42/328 (12%), Positives = 99/328 (30%), Gaps = 52/328 (15%) Query: 21 AQKV-RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN- 78 A + R+ ++N+ TL + + LR + L+ADI+ LQE+ + + Sbjct: 2 ADTLFRIATFNLETLDDDADDPPF-------EERIATLRPQLERLEADILCLQEIDAQHP 54 Query: 79 ---------AVAKVFPKNTWCIFYSTERLINHSKR------DSNNDIHTAIAVRKKN--V 121 A+A++ + ++ T S I A +R Sbjct: 55 VKSAPRILRALARLLDGTRYAGYHVTAGDAPSPADRHNPVIVSRWPIRAARLLRHHLVPP 114 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFC-FLDSLENTYSP 179 ++ + +R + +E +G+ + V ++HL++ + + Sbjct: 115 VRVRLATADPAPDTETEVGWDRPVLHAELEMPDGRVLHVFNLHLRAPIAAPVPGQKAGAQ 174 Query: 180 SCSLLSQQAQ------------WLKDWIT----QKKESLVPFVIAGDFNRKINYLGNNDD 223 S + A+ L+ + + ++AGD N + Sbjct: 175 SWKTAAGWAEGFYLASIKRAGQALETRMAVDRLFDADPEALILVAGDCNADLEQTAVRII 234 Query: 224 FWK-------TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 + + R + + +D+ + + L Q + Sbjct: 235 RAAPDFTGNPALANRVLEPLEQAIPEERRYTVLHGGTPVLLDHLLASPRLAEGLRQVAIH 294 Query: 277 EILYNEDDIKSRGKRL-SDHCPISIDYD 303 ++ + G S H P+ + Sbjct: 295 NEDLTDEVDHADGPSPVSYHAPVVAGFS 322 >gi|227547961|ref|ZP_03978010.1| extracellular nuclease [Corynebacterium lipophiloflavum DSM 44291] gi|227079972|gb|EEI17935.1| extracellular nuclease [Corynebacterium lipophiloflavum DSM 44291] Length = 1044 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 38/347 (10%), Positives = 95/347 (27%), Gaps = 66/347 (19%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQ----------------------EGVSLWKNSVKRTT 51 + SV + + S+N+ + S + Sbjct: 480 LAVPDSVGGEYSIASFNVLNYFTSLGEDVAGCNSYKDMYGNPVTARDCDVRGAYSQQAFE 539 Query: 52 SDYTLLRQYAKNLDADIVFLQEMGS-----------YNAVAKVFPKNTWCIFYSTERLIN 100 + LD ++ L+E+ + A+ K+ Sbjct: 540 DQQAKIVNAINRLDVSVLGLEEIENTYAVTGDVARRDEALGKLVDALNAAGGNWAYAESP 599 Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI----NGKK 156 + I A + V + S + + R+ + + + K Sbjct: 600 AELGTDEDVIRVAFIYNESEVEPVGASRIFDDPAFTGTA---RQPLAQEFKPVGADDSKS 656 Query: 157 IWVLDIHLKSFCFLDSLENT----YSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDF 211 + H KS + + + + + Q+ L D + ++ + + P I GD Sbjct: 657 FVAIVNHFKSKGSVANGDADTGDGQGNNAQVRVAQSTALIDALKEQDDWANKPTFIVGDL 716 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N + +D + ++ + + + + +D+ + + A + Sbjct: 717 N-----SYSREDAVRYLEQEGFSNIASRREFDNA-SYQFAGQLGSLDHVMGNAAATALVQ 770 Query: 272 QESFSEILYNEDDIKSRGKR---------------LSDHCPISIDYD 303 + I +E +R SDH P+ + ++ Sbjct: 771 DAAVWNINADESIAFEYSRRNYNVQDFFEANNPFRSSDHDPVKVGFN 817 >gi|332687227|ref|YP_004457001.1| exodeoxyribonuclease III [Melissococcus plutonius ATCC 35311] gi|332371236|dbj|BAK22192.1| exodeoxyribonuclease III [Melissococcus plutonius ATCC 35311] Length = 254 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 71/304 (23%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + LDAD +QE Sbjct: 1 MKCISWNVNGLRAIVKKNFIY---------------VFNELDADFFCVQETK-LQDGQID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ +S G R Sbjct: 45 LELPGYHQYWDYAIKKGYSGVAVFAK--------------EAAQKVYYGLNMEEHDQEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++++ + + + +D++ + K Sbjct: 91 L-----LTLEYPNFYLVNCYTPNSQP-------ELKRLAYRMTWENAFRDYLIKLKSKKQ 138 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N + + + N + + + Sbjct: 139 -VILCGDLNVAHQPIDLKNWRTNQHSAGFSPEEREKMTKLLDNGFIDTYRYFYPDKEGVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ N L + + SDHCP+ Sbjct: 198 SWWSYRFNARKNNAGWRIDYFIVSDNLKPTLKEATI-----------YTEITGSDHCPVG 246 Query: 300 IDYD 303 ++ D Sbjct: 247 VELD 250 >gi|152979786|ref|YP_001351880.1| exodeoxyribonuclease III [Janthinobacterium sp. Marseille] gi|151279863|gb|ABR88273.1| exodeoxyribonuclease III [Janthinobacterium sp. Marseille] Length = 259 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 84/309 (27%), Gaps = 80/309 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 +++VS N+N + + + DAD + +QE+ + + Sbjct: 2 LKIVSANLNGIRSAAKKGFFT---------------WMAKHDADFICVQELKAQAPDMTP 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + ++ +S + +G S A Sbjct: 47 EFLTPPGYTGYFHYAEKKGYSGAGVYCKT--------------VPDHVQIGFGCSEFDAE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R V+ + K+ V+ ++ S + + + L K Sbjct: 93 GRY-----VQCDFGKLSVISVYCPSGSSSEERQLAKFRFMDVFLPHLLEL-------KAQ 140 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 FVI GD+N N + D + + + + Sbjct: 141 GRDFVICGDWNIAHNEIDLKNFKGNRKNSGFLPEERAWLSRVFDEVGLVDVYRRLHPTTT 200 Query: 246 NA-NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 N+ IDY V + + + +R SDH Sbjct: 201 EECYTWWSNRGQAYAKNVGWRIDYQVATPALAETARSAAI-----------YKDERFSDH 249 Query: 296 CPISIDYDF 304 P++IDYD+ Sbjct: 250 APLTIDYDW 258 >gi|146323277|ref|XP_754988.2| DNA lyase Apn2 [Aspergillus fumigatus Af293] gi|129558370|gb|EAL92950.2| DNA lyase Apn2 [Aspergillus fumigatus Af293] gi|159128003|gb|EDP53118.1| DNA lyase Apn2 [Aspergillus fumigatus A1163] Length = 648 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 40/349 (11%), Positives = 76/349 (21%), Gaps = 82/349 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN-----------LDADIVFLQ 72 R+ +WN+N + W+ + D + L+ADIV Q Sbjct: 3 FRITTWNVNGIRNPFSYEPWRGNRT-FEVDLPKVLHSLNERLIIEQSMFDILEADIVVFQ 61 Query: 73 E--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVR----------KK 119 E + + + W ++S + +S T +R Sbjct: 62 ETKIQRKDLRDDMVLVPGWDCYFSLPKTKKGYSGVVIYTRNATCCPIRAEEGLTGVLCPP 121 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC--FLDSLENTY 177 N V + P + +E+ + + + +F + S N Sbjct: 122 NSSVSFRDLPEEQQIGGYPTIKQLSELEIDAATLDSEGRCVILEFPAFVLLGIYSPANRD 181 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN--------------------- 216 + + I + GD N Sbjct: 182 ESRDNFRHSFIDLMDARIRNLVAMGKRVFVTGDLNIAKGELDAAHATEAIRKGAITEDEF 241 Query: 217 -YLGNNDDFWKTIDPND-------------SLIRFPKEKDSRCNANKNL---------RN 253 F + + R Sbjct: 242 ISAPARRVFNQLLSDGRVIGQRDEGRESPVLFDICRSFHPGRRGMYTCWEQRIIARPGNY 301 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IDY + + + + G SDHCP+ + Sbjct: 302 GARIDYVLCSLDMQDWFSDSNIQ-----------EGLMGSDHCPVYAVF 339 >gi|160885290|ref|ZP_02066293.1| hypothetical protein BACOVA_03289 [Bacteroides ovatus ATCC 8483] gi|156109640|gb|EDO11385.1| hypothetical protein BACOVA_03289 [Bacteroides ovatus ATCC 8483] Length = 519 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 83/281 (29%), Gaps = 54/281 (19%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +R++++NI + + V +Y ++ D+V LQE+ + Sbjct: 49 GNLRVLTFNIRHCAGNDDVI-----------NYDRTAAVINGMEPDVVCLQEVDYMTTRS 97 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + K + ++YPL G A Sbjct: 98 NKVDQLKTLADKTGMNHYFSKSIA-YQGGEYGNGLLFKGTPISTKTYPLPG-------AE 149 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R A E V+ HL + + A+ L D Sbjct: 150 LRSAAIAEFE----NYVVISTHLAL-------------EENNRVESAKQLTDLAKTY--- 189 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 +AGDFN + N F+ + ++ + A K ID+ V Sbjct: 190 NKVVYMAGDFNEDL----MNGTFFTELKKEWEVVSSTENTFPTGQATK------RIDFVV 239 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +++ + L + + SDH P+ D+ Sbjct: 240 TLKTPPTTVVKSNVIYNLDGVNVAIT-----SDHYPLYCDF 275 Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 72/251 (28%), Gaps = 43/251 (17%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 DY + ++ADIV LQ + ++ + + +K Sbjct: 309 DYDRTGRIIAKMNADIVCLQGLDKETERSEGIDQLN-VLAQKANMHDYFAKVIDYKGGEF 367 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 + + K V Y ++ R A+ + E K V + D+ Sbjct: 368 GVGILTKEEPVSVDRYQ------MAGKSEMRAAMVVEYE----KFVVASTNF------DT 411 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 + L + P + G FN +F++ + N Sbjct: 412 DMAKRIEALQTLETKLSAYNK----------PAFLLGYFN----EGDLESEFFQMVKSNW 457 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 +L+ K + K +D+ V ++ + Q E L D Sbjct: 458 NLLSADKSTEVS-------GKKRRLDFIVSLKSHNVNVTQADVIESLSGVDVTV-----A 505 Query: 293 SDHCPISIDYD 303 S H P+ D+ Sbjct: 506 STHYPLFCDFS 516 >gi|253999039|ref|YP_003051102.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. SIP3-4] gi|253985718|gb|ACT50575.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. SIP3-4] Length = 244 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 45/283 (15%), Positives = 82/283 (28%), Gaps = 53/283 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL+ +NI+ +G D + + LD D +QEM + + Sbjct: 4 MRLLCFNIHGGRSLDG-----------QRDLQRIHHLMQRLDIDAGVIQEMETRPS-RGG 51 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P + + + + V L+ ++ R Sbjct: 52 QPNDVERVAGPERPFHLICPSMLEGQGWYGNLIVSRYPIVRG----LIHNLETRPSLEPR 107 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + L+ + V+ HL S S +A+ L I +E Sbjct: 108 MAADALIAGPHGNLRVIGTHL-------------SLSIYERRSEARNLIRLIQAVEEETK 154 Query: 204 -PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-ANKNLRNKIPIDYFV 261 P ++ GD N + +D C +L + +D Sbjct: 155 SPLLLMGDINEWQ----RPSALLRFLDG--------HLTPVPCKATFPSLCPVLRLDRVW 202 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 E + D + +RLSDH PI I+ ++ Sbjct: 203 Y--------EAEGIKITAHRID--GNDIRRLSDHLPIVIELEW 235 >gi|169334284|ref|ZP_02861477.1| hypothetical protein ANASTE_00682 [Anaerofustis stercorihominis DSM 17244] gi|169259001|gb|EDS72967.1| hypothetical protein ANASTE_00682 [Anaerofustis stercorihominis DSM 17244] Length = 251 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 77/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LV+WN+N L + +D+DI +QE Sbjct: 1 MKLVTWNVNGLRACVNKGFM---------------DFFNEVDSDIFSVQETKLQKG-QIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + + A K + + G ++ R Sbjct: 45 MDIPGYEEYWDYAEKKGY----------SGTATFSKIKPISVK----TGLEEEKFSKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++++++ + + + L + + Sbjct: 91 -----VITAEYENFYLVNVYTPNSQNELKRLDYRMEWEDYFADYLCEL--------DKVK 137 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + D ++ + + Sbjct: 138 PVIMCGDLNVAHREIDLKNPKTNKKNAGFTIEERDKMTSLLKRGFVDSYRYLYPDIEGVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ + D SDHCP+ Sbjct: 198 TWWSYRFNARKNNAGWRIDYFIVSDRIKDKIK-----------DVKIFSDVMGSDHCPVL 246 Query: 300 IDYD 303 +D + Sbjct: 247 LDIE 250 >gi|168016300|ref|XP_001760687.1| predicted protein [Physcomitrella patens subsp. patens] gi|162688047|gb|EDQ74426.1| predicted protein [Physcomitrella patens subsp. patens] Length = 431 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 36/297 (12%), Positives = 78/297 (26%), Gaps = 47/297 (15%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + ++S+N+ E + + + +VF QE+ + + Sbjct: 161 DLTVLSYNV-WFREDLEL----------QARLDAIGNVILQHRPHVVFFQEV--TETIYR 207 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 +F + +W + R + V K V + P + Sbjct: 208 IFEQASW-----WKSYNCSVNRRVASQRAYFCMVLSKLPVVSFRQSPFRNS------IMG 256 Query: 143 RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R +++ NG ++ V + HL+S C N + QA+ + Sbjct: 257 RELCLAELDVGNGARLLVANSHLESPCPAPPTWN--QMFSAERVAQAKEAMLMLKDFPN- 313 Query: 202 LVPFVIAGDFNRKINYLG----NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 + GD N G + F + F + + + + + Sbjct: 314 ---VIFGGDMNWDEKTDGVPPLPSGWFDAWVQLRPGEDGFTYDTKANKMISGYRSLRKRV 370 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIK------------SRGKRLSDHCPISIDY 302 D + + E + SDH + + Sbjct: 371 DRMFCQLEDFDTVSIEMVGTEPIPDLTYPKEKKVKGKVEIIRYPVLPSDHFGLLLTL 427 >gi|168061234|ref|XP_001782595.1| predicted protein [Physcomitrella patens subsp. patens] gi|162665915|gb|EDQ52584.1| predicted protein [Physcomitrella patens subsp. patens] Length = 614 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 41/353 (11%), Positives = 93/353 (26%), Gaps = 68/353 (19%) Query: 18 ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + ++S+N+ + + E S T L + ADI+ LQE+ Sbjct: 254 TATSGTFTVLSYNVLSDLYATSEQYSYCPPWALAWTYRRQNLLREIVAYRADILCLQEVQ 313 Query: 76 SYNAVAKVFPKNTWCIF--YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS------ 127 S + P+ + ++ A R+ ++++ Sbjct: 314 SDHYEDFYAPELEKHGYTGVYKKKTGEVYTGSVYVIDGCATFFRRDRFSLVKKYEVEFNK 373 Query: 128 ---------YPLLGAKDSFSRAGNRRAVELLVEINGK-----KIWVLDIHLKSFCFLDSL 173 P + A+ +++E V + C ++ Sbjct: 374 AAQSLSEALIPSTKKAALSRLLKDNVALIVVLEARDTGGFMDPQAVSGKRGQLLCVANTH 433 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGN------------ 220 + + Q L + + + +P ++AGDFN + Sbjct: 434 IHANQELKDVKLWQVHTLLKGLEKIAASADIPMLVAGDFNSVPGSAPHCLLSTGSVDPSH 493 Query: 221 --------------------------NDDFWKTIDPNDSLIRFPKEKDSRCN----ANKN 250 +F + I ++ + + D N Sbjct: 494 PDLQVDPLNILRPASKLCHSLPLVSAYAEFGRLIGNGPTVEKQRRRMDPTTWEPQFTNCT 553 Query: 251 LRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +DY + + E E +D + SDH + ++ Sbjct: 554 RDFLGTLDYIFYTADSLSVESLLELLDEDSLRKDTGLPSPEWSSDHIALLAEF 606 >gi|150008138|ref|YP_001302881.1| hypothetical protein BDI_1504 [Parabacteroides distasonis ATCC 8503] gi|149936562|gb|ABR43259.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] Length = 628 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 85/310 (27%), Gaps = 66/310 (21%) Query: 1 MIRKYVLALVFF-LVPCTASVAQ--------KVRLVSWNINTLSEQEGVSLWKNSVKRTT 51 M + ++ A+V +P ++AQ +R++S+NI + V+ Sbjct: 10 MRKWFIWAIVMIGCLPINKALAQQSGDAERNTLRIMSYNIRNGRGMDEVT---------- 59 Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 D + + D+V +QE+ S + + ++ + Sbjct: 60 -DLGRIADAICKVAPDVVAVQEVDSVTGRSGGIDVLRTLGERTLM-FPTYAPAIDFDGGK 117 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 + + K V + L G R R + + E + HL Sbjct: 118 YGVGMLSKEKPVSYRYIALPG------REEERVLLWVEFE----RYIFCCTHLSLTP--- 164 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S +L ++A + + P IAGD+N + I Sbjct: 165 ---EDRMLSLPILRREAAF----------AHKPLFIAGDWNATAHSP--------FITEI 203 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + +DY + + S Sbjct: 204 SKDFQLLSNPKQATFPASTPD--SCLDYIAGYVKNGQPFTRLSAWV---------PEEAV 252 Query: 292 LSDHCPISID 301 SDH P+ + Sbjct: 253 ASDHRPVVTE 262 >gi|326565908|gb|EGE16069.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis 103P14B1] gi|326571929|gb|EGE21934.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis BC8] gi|326577941|gb|EGE27805.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis O35E] Length = 249 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 79/285 (27%), Gaps = 50/285 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + + + S+NI+ S ++ + DI+ LQE+ N Sbjct: 2 KSITITSYNIH----------KGMSPTNRLVRLMGMKDALLKTNPDILCLQEVQGQNLKR 51 Query: 82 KV----FPKNTWCIFYSTER--LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + FP ++ ++ K H AV ++ P Sbjct: 52 TIDFTEFPDGGQHEWFGEFLGIASSYGKNAEYEHGHHGNAVLSRHPL-----DPKHNLNI 106 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + +R R + V +G + V+ + +Q Q ++D+I Sbjct: 107 TVNRLEKRGVLHCEVHPDGWRRPVVVLCCHLNLLHRD-----------RIKQYQAIRDYI 155 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + ++AGDFN + + F + + Sbjct: 156 -FTLPADASLILAGDFNDWSKKSC------QALSSLGLSEVFLQVHGEYPATFPAKMPVL 208 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +D + L + LSDH PIS Sbjct: 209 SLDRIYVR-----RLKVHNAMVH------GGVPWSNLSDHLPISA 242 >gi|332674310|gb|AEE71127.1| exodeoxyribonuclease III [Helicobacter pylori 83] Length = 250 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 80/303 (26%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++DAD+ +QE + + + Sbjct: 1 MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQD 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + + D R Sbjct: 42 QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINMEEHDKEGRM--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + ++++++ + S + + + L+ Sbjct: 92 ------VTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFRKFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|326569254|gb|EGE19315.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis BC7] gi|326575442|gb|EGE25367.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis 101P30B1] Length = 249 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 79/285 (27%), Gaps = 50/285 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + + + S+NI+ S ++ + DI+ LQE+ N Sbjct: 2 KSITITSYNIH----------KGMSPTNRLVRLMGMKDALLKTNPDILCLQEVQGQNLKR 51 Query: 82 KV----FPKNTWCIFYSTER--LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + FP ++ ++ K H AV ++ P Sbjct: 52 TIDFAEFPDGGQHEWFGEFLGIASSYGKNAEYEHGHHGNAVLSRHPL-----DPKHNLNI 106 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + +R R + V +G + V+ + +Q Q ++D+I Sbjct: 107 TVNRLEKRGVLHCEVHPDGWRRPVVVLCCHLNLLHRD-----------RIKQYQAIRDYI 155 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + ++AGDFN + + F + + Sbjct: 156 -FTLPADASLILAGDFNDWSKKSC------QALSSLGLSEVFLQVHGEYPATFPAKMPVL 208 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +D + L + LSDH PIS Sbjct: 209 SLDRIYVR-----RLKVHNAMVH------GGVPWSNLSDHLPISA 242 >gi|296112314|ref|YP_003626252.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis RH4] gi|295920008|gb|ADG60359.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis RH4] gi|326561824|gb|EGE12159.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis 7169] gi|326563256|gb|EGE13523.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis 46P47B1] gi|326563370|gb|EGE13635.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis 12P80B1] gi|326576470|gb|EGE26378.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis CO72] Length = 249 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 79/285 (27%), Gaps = 50/285 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + + + S+NI+ S ++ + DI+ LQE+ N Sbjct: 2 KSITITSYNIH----------KGMSPTNRLVRLMGMKDALLKTNPDILCLQEVQGQNLKR 51 Query: 82 KV----FPKNTWCIFYSTER--LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + FP ++ ++ K H AV ++ P Sbjct: 52 TIDFAEFPDGGQHEWFGEFLGIASSYGKNAEYEHGHHGNAVLSRHPL-----DPKHNLNI 106 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + +R R + V +G + V+ + +Q Q ++D+I Sbjct: 107 TVNRLEKRGVLHCEVHPDGWRRPVVVLCCHLNLLHRD-----------RIKQYQAIRDYI 155 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + ++AGDFN + + F + + Sbjct: 156 VT-LPADASLILAGDFNDWSKKSC------QALSSLGLSEVFLQVHGEYPATFPAKMPVL 208 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +D + L + LSDH PIS Sbjct: 209 SLDRIYVR-----RLKVHNAMVH------GGVPWSNLSDHLPISA 242 >gi|47087383|ref|NP_998586.1| DNA-(apurinic or apyrimidinic site) lyase [Danio rerio] gi|33416367|gb|AAH55545.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Danio rerio] Length = 310 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 77/304 (25%), Gaps = 73/304 (24%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +++ SWN++ L + + + D DI+ LQE Sbjct: 52 AANMKITSWNVDGLRAWVKKNG---------------LDWVRKEDPDILCLQE---TKCA 93 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K P + + E + + + ++ +A+ K + G Sbjct: 94 EKALPADITAM---PEYPHKYWAGSEDKEGYSGVAMLCKTEPLNVT----YGIGKEEHDK 146 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R ++ +++ ++ + + L + Sbjct: 147 EGR-----VITAEFPDFFLVTAYVPNASRGLVRLDYRKTWDVDFRAYLCGL--------D 193 Query: 201 SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + P V+ GD N + + + F + + Sbjct: 194 ARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPEEREGFTQLLEAGFTDSFRELYPDQA 253 Query: 246 NANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 A +DYFV+ L SDHC Sbjct: 254 YAYTFWTYMMNARSKNVGWRLDYFVLSSALLPGLCDSKIRNT-----------AMGSDHC 302 Query: 297 PISI 300 PI++ Sbjct: 303 PITL 306 >gi|218439253|ref|YP_002377582.1| endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424] gi|218171981|gb|ACK70714.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424] Length = 262 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 26/283 (9%), Positives = 67/283 (23%), Gaps = 31/283 (10%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+++NI + + D++ QE ++ + Sbjct: 3 LKLITFNIRY-------DKPDPDDHNWKVRRKAIASVITHYSPDLIGTQEGKAHQLLDLH 55 Query: 84 FPKNTWCIFYSTERLINHSKRDS--NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + ++ S + P +S+ Sbjct: 56 RMLPHYQSVGGDRTGTRSNEHCSIFYHSQRLNCLETGDFFLSETPEIP-GSITESWGNPH 114 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + + ++ + + S A+ + + ++Q + Sbjct: 115 PRMVTWAIFQGLDEPKKIILFNTHLDYY----------SEKARELGAKLIYERLSQLDVT 164 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP--IDY 259 + DFN + + + + + + ID Sbjct: 165 DTYLFVTADFNATPETVTRKTFETPLPEGRQLDDALAQLPLEDQKSFNHFTEEATDAIDT 224 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D D K G SDH P+ ++ Sbjct: 225 IYYDSR---------VKLQNAFVDRQKWEGVIPSDHFPVIGEF 258 >gi|317374848|sp|A0MTA1|APEX1_DANRE RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName: Full=APEX nuclease; Short=APEN; AltName: Full=Apurinic-apyrimidinic endonuclease 1; Short=AP endonuclease 1; Short=zAP1 gi|117549778|gb|ABK35081.1| apurinic/apyrimidinic endonuclease 1 [Danio rerio] gi|117549788|gb|ABK35082.1| apurinic/apyrimidinic endonuclease 1 [Danio rerio] gi|117549790|gb|ABK35083.1| apurinic/apyrimidinic endonuclease 1 [Danio rerio] gi|117549792|gb|ABK35084.1| apurinic/apyrimidinic endonuclease 1 [Danio rerio] Length = 310 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 77/304 (25%), Gaps = 73/304 (24%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +++ SWN++ L + + + D DI+ LQE Sbjct: 52 AANMKITSWNVDGLRAWVKKNG---------------LDWVRKEDPDILCLQE---TKCA 93 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K P + I E + + + ++ +A+ K + G Sbjct: 94 EKALPAD---ITGMPEYPHKYWAGSEDKEGYSGVAMLCKTEPLNVT----YGIGKEEHDK 146 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R ++ +++ ++ + + L + Sbjct: 147 EGR-----VITAEFPDFFLVTAYVPNASRGLVRLDYRKTWDVDFRAYLCGL--------D 193 Query: 201 SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + P V+ GD N + + + F + + Sbjct: 194 ARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPEEREGFTQLLEAGFTDSFRELYPDQA 253 Query: 246 NANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 A +DYFV+ L SDHC Sbjct: 254 YAYTFWTYMMNARSKNVGWRLDYFVLSSALLPGLCDSKIRNT-----------AMGSDHC 302 Query: 297 PISI 300 PI++ Sbjct: 303 PITL 306 >gi|55962497|emb|CAI11781.1| novel protein (zgc:66204) [Danio rerio] Length = 310 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 77/304 (25%), Gaps = 73/304 (24%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +++ SWN++ L + + + D DI+ LQE Sbjct: 52 AANMKITSWNVDGLRAWVKKNG---------------LDWVRKEDPDILCLQE---TKCA 93 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K P + I E + + + ++ +A+ K + G Sbjct: 94 EKALPAD---ITGMPEYPHKYWAGSEDKEGYSGVAMLCKTEPLNVT----YGIGKEEHDK 146 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R ++ +++ ++ + + L + Sbjct: 147 EGR-----VITAEFPDFFLVTAYVPNASRGLVRLDYRKTWDVDFRAYLCGL--------D 193 Query: 201 SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + P V+ GD N + + + F + + Sbjct: 194 ARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPEEREGFTQLLEAGFTDSFRELYPDQA 253 Query: 246 NANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 A +DYFV+ L SDHC Sbjct: 254 YAYTFWTYMMNARSKNVGWRLDYFVLSSALLPGLCDSKIRNT-----------AMGSDHC 302 Query: 297 PISI 300 PI++ Sbjct: 303 PITL 306 >gi|311032107|ref|ZP_07710197.1| endonuclease/exonuclease/phosphatase [Bacillus sp. m3-13] Length = 264 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 79/270 (29%), Gaps = 42/270 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGS------------YNAVAKVFPKNTWCIFYSTERLI 99 + + K D++ LQE+ N V + + S L+ Sbjct: 18 EKIQHIARAIKEQAYDVIALQEVSQSIDAQVVKGNIKQNNFGLVLQQELEKLGVSDYELV 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ ++ S+ + + DS R+ V + VE+ G+++ Sbjct: 78 WDFAHMGYDTFEEGLAILTRHSIKKTHSFFVSKSTDSDFWK-TRKIVGVTVEVQGEEMSF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL + + Q + L + + P+ + GDFN + G Sbjct: 137 YTCHLGWWSDEEEPA----------KYQMKQLIEKVK----GTEPYFLLGDFNNSAHIKG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCN------ANKNLRNKIPIDYFVMDQNAYKFLIQE 273 +F + EKDS + + ID + Sbjct: 183 EGYEFLTSTAGLHDTYLLASEKDSGVTVEGKIAGWDENKQDLRIDLILAS---------S 233 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 S + +SDH + + + Sbjct: 234 PPSVTSSKVVFNGQNREVVSDHYGVEVTLE 263 >gi|269796071|ref|YP_003315526.1| exodeoxyribonuclease III Xth [Sanguibacter keddieii DSM 10542] gi|269098256|gb|ACZ22692.1| exodeoxyribonuclease III Xth [Sanguibacter keddieii DSM 10542] Length = 266 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 32/303 (10%), Positives = 78/303 (25%), Gaps = 64/303 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 V + + N+N + + ++ +I+ LQE+ + + + + Sbjct: 2 VTIATANVNGVRAAYRNG---------------MGEWLAERKPEILLLQEVRATDEILEG 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 W + + +A+ + G + G Sbjct: 47 LLGEGWNSVHQAC----------DIKGRAGVAIATTLPFAAVRVGLGNGEPEVPVDTGRW 96 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +G+ + V+ +++ S + + + + + +S Sbjct: 97 VEADIEL-PSGEVLTVVSVYIHSGTAGTPKMDQK-------FAHLEKVDARLRELMDSGR 148 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GD N + + + + + Sbjct: 149 HVVVGGDVNIAHQNVDIKNWKGNLKSAGFLPEERAYLDRWFEAGWVDLGRRHGGEGPGPY 208 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY + + D S R SDH P+ Sbjct: 209 TWWSNRGQSFANDAGWRIDYQLSTPALAELASNVHV-------DRADSYEARWSDHAPLL 261 Query: 300 IDY 302 DY Sbjct: 262 ADY 264 >gi|118475279|ref|YP_892840.1| exodeoxyribonuclease III [Campylobacter fetus subsp. fetus 82-40] gi|118414505|gb|ABK82925.1| exodeoxyribonuclease III [Campylobacter fetus subsp. fetus 82-40] Length = 252 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 75/304 (24%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L G + + D + LQE+ Sbjct: 1 MKLISWNVNGLRAALGKESF---------------SWLDEHKPDFLALQEIK-------- 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ N S + ++ + +S + Sbjct: 38 VSEDKIPAEIYNLGFENISANSAKRPGYSGVMSLSNLKSQNLKSQFFDDDEGR------- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++E I + +I+ + D + +I Sbjct: 91 -----VLEHKFDNIHLFNIYFPNGQSGDER-------LAYKMDFYDKFLSYINALVSEGK 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + GD N L + + + + F + NA Sbjct: 139 GVIFCGDVNTAHREIDLKNPKANSKTSGFLPIERAWIDKVIDSGFIDTFRFINGDKENAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + N L + + SDHCP+ Sbjct: 199 SWWSYRFNARAKNVGWRIDYFFISSNLKDKLKDAFILDSI-----------EGSDHCPVG 247 Query: 300 IDYD 303 I+ D Sbjct: 248 IEID 251 >gi|304388714|ref|ZP_07370772.1| exodeoxyribonuclease III [Neisseria meningitidis ATCC 13091] gi|304337278|gb|EFM03454.1| exodeoxyribonuclease III [Neisseria meningitidis ATCC 13091] Length = 259 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S N+N + + +Y ADIV +QE+ + A Sbjct: 2 LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 KN + ++ +AV K +G R Sbjct: 47 DMKNPHGMHGHWHCAEKRG--------YSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + ++ V+ ++L S + + + + + K Sbjct: 95 F-----VRCDFGRLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNEGR 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248 V+ GD+N + + + + Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGY 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY ++ + + ++ SDH P+ Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKALSAHV-----------YKDEKFSDHAPLV 251 Query: 300 IDYDF 304 ++YD+ Sbjct: 252 MEYDY 256 >gi|261749295|ref|YP_003256980.1| exodeoxyribonuclease III [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497387|gb|ACX83837.1| exodeoxyribonuclease III [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 256 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 91/305 (29%), Gaps = 76/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 ++++S+NIN + L + K+ D++ LQE+ Sbjct: 1 MKIISYNINGIRSGINKG---------------LLHWIKSYQPDVLCLQEIKASKEQIKT 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +F + ++ + ++ + + K + + G Sbjct: 46 SLFDHLGYYHYWFP---------STKRKGYSGVGILCK----EKPHHIEYGIGIESIDTE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R ++ I+ KKI V+ +++ S + + +I + ++ Sbjct: 93 GR-----VLRIDLKKISVISLYIPSGKH-------LKNRLNFKFYFMENFFSYIKKIQKK 140 Query: 202 LVPFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNA 247 L VI GD+N + + +D W + N I + N Sbjct: 141 LKDLVICGDYNICHHEIDIHDPIRNRKISGFLPEERKWMSNFLNLGFIDSFRNYVKEANH 200 Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 IDY ++ ++ K + + SDHCP Sbjct: 201 YSWWSYYSNAKKNNKGWRIDYAMVSRSLKKKMNKA-----------YLLPEIPYSDHCPT 249 Query: 299 SIDYD 303 ++ + Sbjct: 250 VLEIE 254 >gi|169335183|ref|ZP_02862376.1| hypothetical protein ANASTE_01591 [Anaerofustis stercorihominis DSM 17244] gi|169257921|gb|EDS71887.1| hypothetical protein ANASTE_01591 [Anaerofustis stercorihominis DSM 17244] Length = 357 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 45/320 (14%), Positives = 107/320 (33%), Gaps = 63/320 (19%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTT--------SDYTLLRQYAKNLDADIVFLQE 73 ++ ++++N+ ++ + + KRT + + Q KN +D+VFLQE Sbjct: 54 DELSVLTYNLGYCNDSADSDFFMDGGKRTRIESKDKVIRNMKGIEQNIKNNKSDVVFLQE 113 Query: 74 MGSYN----------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 + + ++ +++ + + I + D + I Sbjct: 114 VDEKSKRAYGVNEVKYLSDNLNGSSYFAKNFSCKYIPYPFPDMIGGVEAGIVTVSPYKVS 173 Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVE--LLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 + Y L A R R + + ++ + K++ ++++H++++ Sbjct: 174 DAKRYSLPVAFKYPIRVCQMKRCLLVERVKIKNSDKELVLVNLHMEAY-----------D 222 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------RKINYLGNNDDFWK--TIDPN 231 +Q + L D++ ++ + + GDFN Y ND ++ T++ + Sbjct: 223 DGEGKKKQTKVLTDFLNKEYKKGNYCIAGGDFNQNFPNADNKKYPIINDKYFTPGTLNLD 282 Query: 232 DSLIRFPKEKDSRCNA----------NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + D N ID F++ N ++ Sbjct: 283 AFSKDWTFAVDDSLPTSRLLNEEYDENSKNTQLYVIDGFILSPNVKLKKVK--------- 333 Query: 282 EDDIKSRGKRLSDHCPISID 301 SDH P+ I+ Sbjct: 334 ---TIDTKFNYSDHNPVRIE 350 >gi|84515771|ref|ZP_01003132.1| exodeoxyribonuclease III, putative [Loktanella vestfoldensis SKA53] gi|84510213|gb|EAQ06669.1| exodeoxyribonuclease III, putative [Loktanella vestfoldensis SKA53] Length = 262 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 31/306 (10%), Positives = 68/306 (22%), Gaps = 71/306 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L +WNIN L+ Q + DI+ LQE S + Sbjct: 2 PFTLATWNIN----------------SVRLREELVLQMLREEQPDILCLQECKSPVDL-- 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 L + +A+ K + + Sbjct: 44 -------IPVAQFHALGYTHMVARGQKGYNGVAIISKLPLQEAGAEDYAALGHARH---- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V +E + + + ++ + D + + ++D Sbjct: 93 ---VAARLENG---VTIHNHYVPAG--GDIPDRAVNAKFGNKLDYLTDMRD--AYHASRP 142 Query: 203 VPFVIAGDFNRKINYLGN--NDDFWKTID-------------PNDSLIRFPKEKDSRCNA 247 ++ GD N + K + + ++ + N Sbjct: 143 QKSILVGDLNIAPREDDVWNHKALLKVVSHTPIEVDHFGQVMDAGGWVDVTRQDIPQGNL 202 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + + + SDH P Sbjct: 203 YSWWSYRSPDWDAADKGRRLDHVWATPDISGAAHGSRVLRHV-------RGWDKPSDHAP 255 Query: 298 ISIDYD 303 + +D Sbjct: 256 VFASFD 261 >gi|295086350|emb|CBK67873.1| Endonuclease/Exonuclease/phosphatase family. [Bacteroides xylanisolvens XB1A] Length = 341 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 41/343 (11%), Positives = 91/343 (26%), Gaps = 59/343 (17%) Query: 2 IRKYVLALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKN----------- 45 ++K ++ L + + Q+ + +N+ L + + Sbjct: 1 MKKSLMTLGVLALFVLMAYGQEKKFALYSVAFYNMENLFDTIHDEGKNDYEYLPNGTNQW 60 Query: 46 SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + + + + + L D I+ + E+ +Y + + + Sbjct: 61 NTMKYKAKLKNMSEILSMLSTDKLPMGPAIIGVSEIENYRVLEDILKQP---ALADRGYQ 117 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 H + + A K + + + + R + I G+K+ Sbjct: 118 YVHYEGADQRGVDCAFFYNPKLFELTNSKL-VPYVYINDTVHKTRGFLIASGNIAGEKMH 176 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 + H S SP+ +Q + +KD + K++S VI GD N Sbjct: 177 FIVNHWPSR-------AATSPARERAGEQVRAIKDSL-LKEDSAAKIVIMGDMNDDPMDK 228 Query: 219 GNNDDFWKT-----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLI 271 + P D + D V N Sbjct: 229 SMAVALGAKRKPADVGPTDLYNPWWDTLKKGYGTLMYKGKWNLFDQIVFTGNLLGTDRST 288 Query: 272 QESFSEILYNEDDIKSRGKR-----------------LSDHCP 297 + + ++ D + + + SDH P Sbjct: 289 LKFYKHEIFCRDFMFQKEGKYKGYPKRTQAGGVWLNGYSDHLP 331 >gi|260891468|ref|ZP_05902731.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia hofstadii F0254] gi|260858851|gb|EEX73351.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia hofstadii F0254] Length = 246 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 83/285 (29%), Gaps = 52/285 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A++ +++++NI G L + K + D V LQE+ + Sbjct: 10 AKEFKIMTYNIYGGRLTNG---------------QKLGESIKPYEPDFVSLQEVDKFTKR 54 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + K + I+ K +Y L Sbjct: 55 SNFRDITSDIAKVLGYDYYFFKKSRDYDGGEYGISFISKYPLEKIYTYELPSEG-----V 109 Query: 141 GNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R+ + + GKK+ V++ HL + ++ + L D +T+ Sbjct: 110 EKRQLIVAELSKKTFGKKVLVMNTHLDFKQ-------------QIKPEEMESL-DLLTKF 155 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + ++GDFN + D + + S + ID Sbjct: 156 FDKDDIKFLSGDFNFLPTTKYYGEIT------KDWRDTYMESNASGVRTLSDP----RID 205 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 Y Q+ + Y +D +LSDH P D Sbjct: 206 YIFGSQSKKWKVKSS------YFINDATQDWTKLSDHLPYITVLD 244 >gi|121596014|ref|YP_987910.1| endonuclease/exonuclease/phosphatase [Acidovorax sp. JS42] gi|120608094|gb|ABM43834.1| Endonuclease/exonuclease/phosphatase [Acidovorax sp. JS42] Length = 279 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 91/294 (30%), Gaps = 51/294 (17%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P ++ VA ++++ N++ LR+ + + AD+VFLQE+ Sbjct: 29 PSSSPVA--FKVLTVNVHKGFTSFNRRFM----------LHELREAVRQVSADLVFLQEV 76 Query: 75 GSYNAVAKV----FPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + FP+ F + + + D H A+ K V +++ Sbjct: 77 LGTHQRHAGRVTNFPQEPHYEFLADSIWTQYAYGRNAVYTDGHHGNALLSKFPIVHYENH 136 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + + R + +++ V I + + QQ Sbjct: 137 DISVSG-----PERRGMLHCVLQPPQHARPVHAICVHLGL-----------QEAHRQQQL 180 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + + + P ++AGDFN +D + ++ ++ Sbjct: 181 RRVSALVHSFPAQD-PVIVAGDFNDWRGRA--HDVLQREAGLHEVFVQACGRA---VRTF 234 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +P+D + + + + RLSDH P++ + Sbjct: 235 PASLPLLPLDRIYVRGTS-----------VHTPMSLPRRPWNRLSDHAPLAAEI 277 >gi|212715599|ref|ZP_03323727.1| hypothetical protein BIFCAT_00498 [Bifidobacterium catenulatum DSM 16992] gi|212660966|gb|EEB21541.1| hypothetical protein BIFCAT_00498 [Bifidobacterium catenulatum DSM 16992] Length = 286 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 79/311 (25%), Gaps = 57/311 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-AVA 81 + + + N+N + + + Q+A D+ +QE+ + + Sbjct: 2 TITITTSNVNGIRA---------------AKRKGIEQWAAKNTPDVWCMQEVRAPQNEID 46 Query: 82 KVFPKNTWCIFYS----TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +F + + + + +N + + V ++ +D Sbjct: 47 PIFDEFGFEYATAGRVDDQSELNRMNEICRIKGRAGVGLLSTLPVVEKRYGLPGLEEDVD 106 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 S R + G I V +++ + D + L ++ + Sbjct: 107 S---GRWIEADVQTPQGYVITVTCVYVHAGNTDDPEKMKQK--YRFLDTMLARMEQLRDE 161 Query: 198 KKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEK 241 V+ GDFN K + + + Sbjct: 162 AAHGGKQAVLCGDFNIAHTPLDIKNAKANETHAGFLPEERAYVDKWLGELEFVDVMRDLA 221 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + IDY + + D + R Sbjct: 222 GDIQGPYTWWSQRGRAFDNNVGWRIDYQFATPELAETACG-------FVIDKAPTYDLRW 274 Query: 293 SDHCPISIDYD 303 SDH P+SI YD Sbjct: 275 SDHAPLSIMYD 285 >gi|323344203|ref|ZP_08084429.1| endonuclease/exonuclease/phosphatase family protein [Prevotella oralis ATCC 33269] gi|323094932|gb|EFZ37507.1| endonuclease/exonuclease/phosphatase family protein [Prevotella oralis ATCC 33269] Length = 317 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 36/336 (10%), Positives = 93/336 (27%), Gaps = 59/336 (17%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKR 49 MI +LA VF V N L + + ++ + R Sbjct: 1 MILSLLLASVFTFVEL-------------NCENLFDCLHDTSKQDEEFMPDSYRHWTRTR 47 Query: 50 TTSDYTLLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH 101 + Q + D+V L E+ + + + + ++ + + Sbjct: 48 YWRKLNHIGQEILSCGEDTSGWSLPDMVALCEVENDSVMHDLTMRS-----LLRKAGYRY 102 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVL 160 S + +A+ ++ + R + V ++G + V Sbjct: 103 IMTSSPDLRGIDVALMYSPFSFSLLNHHSIRVAPMKDMRPTRDILYASGVVLSGDTLHVF 162 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 +H S ++ + + A ++ + + ++AGDFN + Sbjct: 163 VVHAPSRAGGEAATRPFRMLVARRLGAAVDSIRRLSPRAK----VIVAGDFNDYSDSRSI 218 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI-- 278 + + + + + +D+ + D++ L++ + Sbjct: 219 DYVCKRGLINVSEGAKGSHGAKG---TYRYKGEWGSLDHILADEDLADSLVECRIHDAPF 275 Query: 279 ------------LYNEDDIKSRGKRLSDHCPISIDY 302 + + SDH P+ + Sbjct: 276 LLTDDKTYGGKQPFRTYIGPKYQQGFSDHLPLVARF 311 >gi|297242738|ref|ZP_06926676.1| exonuclease III [Gardnerella vaginalis AMD] gi|296888949|gb|EFH27683.1| exonuclease III [Gardnerella vaginalis AMD] Length = 288 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 35/285 (12%), Positives = 77/285 (27%), Gaps = 45/285 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN--- 108 ++ + ++ D+ +QE+ + + ++E ++N K D+ Sbjct: 15 AERKGMLNWSDAHTPDVWCMQEVRAPQDAIDPIMTKIEMGYRTSENIVNSIKNDNFTYTN 74 Query: 109 -----DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 +A+ V ++ ++D S R + +G +I + ++ Sbjct: 75 EVCRVKGRAGVALVTSLPVVEKRYGLPGLSEDVDS---GRWVETDVRTPDGYEITIASVY 131 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------ 217 + + D L L + ++ GDFN Sbjct: 132 VHAGNVDD--PQKMKQKFRFLDTMLTRLGELRDAAASGGNQAILCGDFNIAHTSLDIKNA 189 Query: 218 ----------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPID 258 + I+ + + + +D Sbjct: 190 KANEKSAGFLPEERAYIDRWINEYEFVDVMRMLAGDIQGPYTWWSQRGKAFDNNVGWRLD 249 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 Y + + D +S R SDH P+SI YD Sbjct: 250 YQFATPEIAESARG-------FVIDRAESYDARWSDHAPLSIKYD 287 >gi|302889004|ref|XP_003043388.1| hypothetical protein NECHADRAFT_53421 [Nectria haematococca mpVI 77-13-4] gi|256724304|gb|EEU37675.1| hypothetical protein NECHADRAFT_53421 [Nectria haematococca mpVI 77-13-4] Length = 341 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 38/292 (13%), Positives = 87/292 (29%), Gaps = 33/292 (11%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++++N+ L + ++ + + Q+ + D++ LQE ++ V Sbjct: 7 ASSFNILTYNVAGLPGIINSNGIEDKKLAASF----IGQHMREEAYDVIHLQEDFDFHDV 62 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + +T+ F S + ++T D F+ Sbjct: 63 IAINDNHTYLTFSS-------GDVIDGDGLNTFSWYNSSLFDRYTWKECATNGGDCFT-- 113 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + + I+G ++ + ++H + + I + Sbjct: 114 -PKGFTYMTSHIDGLEVDLYNLHADAGNEWTDRWARSEG--------INQVLRHIKKH-N 163 Query: 201 SLVPFVIAGDFNRKINYLG--NNDDFWKTIDPND------SLIRFPKEKDSRCNANKNLR 252 P ++AGDFN + N I K + C+ Sbjct: 164 KGRPVILAGDFNDVWTHPKRTINRLTDAGFTDAWVKLHHNGTIPENNGKSNGCDHPPQNN 223 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +D + L F ++ + LSDH P+ +D+ + Sbjct: 224 SCEVVDKVFYRSGTFVTLDAVKFD--YKSDIFVAGNNSPLSDHEPVLVDFVW 273 >gi|255015090|ref|ZP_05287216.1| hypothetical protein B2_14377 [Bacteroides sp. 2_1_7] Length = 619 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 85/310 (27%), Gaps = 66/310 (21%) Query: 1 MIRKYVLALVFF-LVPCTASVAQ--------KVRLVSWNINTLSEQEGVSLWKNSVKRTT 51 M + ++ A+V +P ++AQ +R++S+NI + V+ Sbjct: 1 MRKWFIWAIVMIGCLPINKALAQQSGDAERNTLRIMSYNIRNGRGMDEVT---------- 50 Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 D + + D+V +QE+ S + + ++ + Sbjct: 51 -DLGRIADAICKVAPDVVAVQEVDSVTVRSGGIDVLRTLGERTLM-FPTYAPAIDFDGGK 108 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 + + K V + L G R R + + E + HL Sbjct: 109 YGVGMLSKEKPVSYRYIALPG------REEERVLLWVEFE----RYIFCCTHLSLTP--- 155 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S +L ++A + + P IAGD+N + I Sbjct: 156 ---EDRMLSLPILRREAAF----------AHKPLFIAGDWNATAHSP--------FITEI 194 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + +DY + + S Sbjct: 195 SKDFQLLSNPKQATFPASTPD--SCLDYIAGYVKNGQPFTRLSAWV---------PEEAV 243 Query: 292 LSDHCPISID 301 SDH P+ + Sbjct: 244 ASDHRPVVTE 253 >gi|269796800|ref|YP_003316255.1| exodeoxyribonuclease III [Sanguibacter keddieii DSM 10542] gi|269098985|gb|ACZ23421.1| Exodeoxyribonuclease III [Sanguibacter keddieii DSM 10542] Length = 263 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 68/305 (22%), Gaps = 70/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WNIN + + + D++ LQE + ++ Sbjct: 1 MRLATWNIN----------------SIRARVDRAVAFLERSGTDVLALQETKAKDS---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ + LG D Sbjct: 41 ------QFPFEAFEAAGYEVAHFGLSQWNGVAIISRVGLEDVS----LGFPDQPQFGEEP 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KES 201 + + V +++ LD+ Y L+ + Sbjct: 91 VVEARAIGATCGGVRVWSLYVPHGRALDNPHYAYKLD------WLSTLRGHAQSWVEADP 144 Query: 202 LVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + GD+N D + + + Sbjct: 145 QAKVALVGDWNVAPRDTDVWDMAVFEGQTHVSQPERDAFAAFEGAGYTEVSREFVPEDRK 204 Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ + D + +GK SDH P Sbjct: 205 -YTYWDYQQLRFPKNQGLRIDFAYTSPALTSAVTGVEI-------DRDERKGKGASDHVP 256 Query: 298 ISIDY 302 + +D Sbjct: 257 VIVDI 261 >gi|229828382|ref|ZP_04454451.1| hypothetical protein GCWU000342_00443 [Shuttleworthia satelles DSM 14600] gi|229792976|gb|EEP29090.1| hypothetical protein GCWU000342_00443 [Shuttleworthia satelles DSM 14600] Length = 390 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 95/317 (29%), Gaps = 56/317 (17%) Query: 20 VAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 + ++SWN+ G + S R + + K ++ D Sbjct: 88 AGDLLSVLSWNVGYGALGDNADFFMDGGKGVKTASQDRVKENLNEIVTEVKKINPDFALF 147 Query: 72 QEMGSY----------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 QE+ + + P+ Y+ + +++ + + Sbjct: 148 QEVDVNSHRSYGIDESQILGQAMPRGQMTFAYNFKVAFIPYPLPPIGKVNSGLVTLSRYQ 207 Query: 122 RVLQQSYPLLGAKDSFSRAGN--RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYS 178 L +R GN R + + NGK++ ++++HL+++ Sbjct: 208 IRDASRTSLPNPFSWPNRLGNLKRCLAVHRIPVSNGKELVLVNLHLEAY----------- 256 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------KINYLGNNDDFWKTI 228 Q + L++ + ++ E+ + GDFN+ ++ + Sbjct: 257 DDGEGKLAQTKVLRELLEKETEAGNYVIAGGDFNQIFSNVDSSAFPLHEGKWEPGIINSA 316 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF---LIQESFSEILYNEDD- 284 D + + + C + +D+ + + F +I + Sbjct: 317 DFGEGMQLLMDSGTASCRS---------LDHPLAGADQKDFQFYIIDGFICSENVTVEST 367 Query: 285 -IKSRGKRLSDHCPISI 300 + SDH P+ + Sbjct: 368 QTQDLNFHASDHNPVVL 384 >gi|148554721|ref|YP_001262303.1| endonuclease/exonuclease/phosphatase [Sphingomonas wittichii RW1] gi|148499911|gb|ABQ68165.1| Endonuclease/exonuclease/phosphatase [Sphingomonas wittichii RW1] Length = 363 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 45/298 (15%), Positives = 87/298 (29%), Gaps = 33/298 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + ++++NI L + + + + + LR IV LQE + A Sbjct: 51 LSVMTYNIEGLPWPVRLGR-EAAFTKIGARLEALR--LLGEQPHIVVLQEAFTDQAKRIG 107 Query: 84 FPKNTWCIFYSTERLINH------------------SKRDSNNDIHTAIAVRKKNVRVLQ 125 I +R + S S + + + + + Sbjct: 108 VEGGYRYIVNGPDRSLAGAAITTEADRAFQRDASFFSGERSGKVVDSGLQILSDYPILSV 167 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + F N+ AV ++ + G + I V+D+HL S + S Sbjct: 168 RRMAFPTCA-GFDCLANKGAVLAMIAVPGLGEPIAVVDVHLNSRR---ASHVADDRSLYA 223 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 +Q L ++ + P ++AGDFN + ++ Sbjct: 224 YRRQIDALDQFLAANVKPGTPVIVAGDFNVGQRPARQAYFTAHLRKWGERAPGAVRDALH 283 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS------RGKRLSDH 295 C A + +P D A + + D + + LSDH Sbjct: 284 SCLAAPAICGAMPSDAAFSLARARDWELAVPGERAELAVDGLSVPFGHEIDERMLSDH 341 >gi|261416712|ref|YP_003250395.1| exodeoxyribonuclease III Xth [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373168|gb|ACX75913.1| exodeoxyribonuclease III Xth [Fibrobacter succinogenes subsp. succinogenes S85] gi|302325662|gb|ADL24863.1| exodeoxyribonuclease III [Fibrobacter succinogenes subsp. succinogenes S85] Length = 265 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 79/305 (25%), Gaps = 76/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAVAK 82 +++ SWN+N + + D DI+ LQE+ + N V++ Sbjct: 1 MKIYSWNVNGIRSVLKKGFE---------------DWFSATDPDILCLQEVRAEKNQVSE 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + +++ + ++ +AV K + D R Sbjct: 46 IATREGYYTYWNACKRK---------KGYSGVAVYSKIEPDAVNYGFDIEEFDEEGRVLQ 96 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + D L F + + L + Q Sbjct: 97 --------------LVFPDWVLNCIYFPNGGQGDDRLDYKLRFY--DAFLENSKQWLADG 140 Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 V GD+N L + N + F +A Sbjct: 141 KHVVTVGDYNTCHKEIDIARPKENENVSGFLPIERAWMDKYVENGFVDTFRTLHPDTRDA 200 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 N+ +DY +D ++ SDHCPI Sbjct: 201 YSWWSNRFGARERNVGWRLDYGFVDAALMPNVVSSEIL-----------SNVMGSDHCPI 249 Query: 299 SIDYD 303 S++ + Sbjct: 250 SLELE 254 >gi|225026087|ref|ZP_03715279.1| hypothetical protein EUBHAL_00328 [Eubacterium hallii DSM 3353] gi|224956574|gb|EEG37783.1| hypothetical protein EUBHAL_00328 [Eubacterium hallii DSM 3353] Length = 250 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 40/299 (13%), Positives = 78/299 (26%), Gaps = 78/299 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + K DADI +QE Sbjct: 1 MKLISWNVNGLRACVKKGFE---------------DFFKEADADIFCVQETKLQEG-QID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + +++ +S K+ + G R Sbjct: 45 FAPEGYECYWNYAEKKGYSGTAVFTK---------KHPLKVWN-----GIGMEEHDQEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + + + ++ + + + Q L + Sbjct: 91 -----VITLEFEDFFFVTVYTPNSQSELKRLDYRMKWEDDFREYLQEL--------DKEK 137 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + + F A Sbjct: 138 PVIMTGDLNVAHEEIDLKNPKTNKKNAGFTQEERNKFTELLGAGFVDSFRYLNPELAGAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYFV+ + + + ED I + SDHCPI Sbjct: 198 TWWSYRFKAREKDAGWRIDYFVVSERWKEKI-----------EDAIIYKTVMGSDHCPI 245 >gi|254447686|ref|ZP_05061152.1| exodeoxyribonuclease III [gamma proteobacterium HTCC5015] gi|198263029|gb|EDY87308.1| exodeoxyribonuclease III [gamma proteobacterium HTCC5015] Length = 256 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 36/272 (13%), Positives = 78/272 (28%), Gaps = 63/272 (23%) Query: 59 QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 ++ + +AD+V +QE ++ +VF + + +S + Sbjct: 22 EWMQAQNADVVCIQETKAQAHQLDDEVFHPAGYHRYLFDAEKKGYSGVALYAKQKPDDVI 81 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 G + R +E + V I++ S D + Sbjct: 82 --------------YGFGEEGFDREGRY-----IEARFGDLSVASIYVHSGSSGDERQQE 122 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD------------- 223 + + + E +++ GD+N + Sbjct: 123 KYRFMDFYLPKLKA-------QGEDGRRYILCGDWNIAHTKADIKNWRGNQKNSGFLPEE 175 Query: 224 --FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQ 272 + T+ + + +E + ++ N+ IDY ++ N + Sbjct: 176 RAWLDTLFDDMQWVDAFREIEQEEHSYTWWSNRGQAWANNTGWRIDYHIVSPNLKGTVKS 235 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +R SDH P++IDYDF Sbjct: 236 TDI-----------YTQERFSDHAPLTIDYDF 256 >gi|15678240|ref|NP_275355.1| exodeoxyribonuclease [Methanothermobacter thermautotrophicus str. Delta H] gi|2621258|gb|AAB84718.1| exodeoxyribonuclease [Methanothermobacter thermautotrophicus str. Delta H] Length = 257 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 35/307 (11%), Positives = 85/307 (27%), Gaps = 81/307 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81 ++++SWN+N L ++ DI+ LQE+ + Sbjct: 4 LKIISWNVNGLRAVHRKGF---------------LKWFMEEKPDILCLQEIKAAPEQLPR 48 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K+ + F++ + + +A+ K + + D+ R Sbjct: 49 KLRHVEGYRSFFTPAERKGY----------SGVAMYTKVPPSSLREGFGVERFDTEGRIQ 98 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + +I+ + + + + + ++++S Sbjct: 99 I---------ADFDDFLLYNIYFPNGKMSEER-------LKYKLEFYDAFLEDVNRERDS 142 Query: 202 LVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245 +I GDFN + K I+ + + +S Sbjct: 143 GRNVIICGDFNTAHREIDLARPKENSNVSGFLPVERAWIDKFIENG--YVDTFRMFNSDP 200 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +DYF +++ + + SDHC Sbjct: 201 GQYTWWSYRTRARERNVGWRLDYFFVNEEFKGKVKRSWIL-----------SDVMGSDHC 249 Query: 297 PISIDYD 303 PI ++ + Sbjct: 250 PIGLEIE 256 >gi|332971495|gb|EGK10445.1| exodeoxyribonuclease III [Kingella kingae ATCC 23330] Length = 257 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 77/305 (25%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R++S N+N + +Y ADIV +QE+ + A Sbjct: 1 MRIISANVNGIRSAYKKGF---------------LEYIAQSGADIVCVQELKAQEA-DLS 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ +A+ K Q + D+ R Sbjct: 45 VEMQQPHGMHGVWHCAQ-------KRGYSGVAIYSKRAPDRVQYGLGIELFDNEGRF--- 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + ++ V+ ++L S + + L Sbjct: 95 ------VRADFGRLSVISLYLPSGTSAEERQAYKYQFLDAFYPILADLLA-------EGR 141 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248 V+ GD+N + + + ++ Sbjct: 142 DVVVCGDWNIAHQNIDIKNWKGNLKNSGFLPEEREWIGNVIAKLGWTDMWRKLYPDVAGY 201 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY ++ + ++ SDH P+ Sbjct: 202 TWWSNRGQAYAKDVGWRIDYQMVSPELAAKAQSAHV-----------YKDEKFSDHAPLV 250 Query: 300 IDYDF 304 +DYD+ Sbjct: 251 VDYDY 255 >gi|311276364|ref|XP_003135157.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like [Sus scrofa] Length = 515 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 47/330 (14%), Positives = 90/330 (27%), Gaps = 69/330 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+VSWNIN + + ++ T + + LDADIV LQE + Sbjct: 2 LRVVSWNINGIRSHLQGAGYEEPSNCTAR---AVGRILDKLDADIVCLQETKVTRDVLTE 58 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKDS 136 + + ++S R + + +A V + L G D Sbjct: 59 PLAIIEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLATLNGDVNCYGNMDE 118 Query: 137 FSRAGNRR------AVELLVEI-----NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 F++ R A+ +I + K + V++++ + + Sbjct: 119 FTQEELRALDSEGRALLTQHKIRTQDGDEKSLTVINVYCPHADPGKPE----RLTFKMRF 174 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTID-- 229 ++ + +I GD N + Sbjct: 175 YHLLQIRA--EALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDGLLSNL 232 Query: 230 ------------PNDSLIRFPKEKDSRCNANKNL----RNKIPIDYFVMDQNAYKFLIQE 273 + + ++ C + IDY + D+ Q Sbjct: 233 RCQAGSHMGPFIDSYRYFQPKQKGAFTCWSTVTGARHLNYGSRIDYVLGDRALVMDTFQS 292 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 SF SDHCP+ + Sbjct: 293 SFVL----------PEVMGSDHCPVGAVLN 312 >gi|288560813|ref|YP_003424299.1| exodeoxyribonuclease III Xth2 [Methanobrevibacter ruminantium M1] gi|288543523|gb|ADC47407.1| exodeoxyribonuclease III Xth2 [Methanobrevibacter ruminantium M1] Length = 258 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 38/307 (12%), Positives = 78/307 (25%), Gaps = 78/307 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAV 80 K+RL+SWN+N + + ADIV LQE + Sbjct: 3 KIRLISWNVNGIRAIHKKGF---------------LDWFNEEKADIVNLQETKAKIEQLP 47 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K+ + ++ + +S + I + G Sbjct: 48 KKLINVPGYTSYFHSAERGGYSGVATYTSIEPNEVIN--------------GMGIEKFDI 93 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + ++ +L+I+ + + D+ ++ Sbjct: 94 EGRL-----IRLDFDDFTLLNIYYPNGGRDEER-------LQYKLDFYDAFLDYANDLRD 141 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKT---------------IDPNDSLIRFPKEKDSRC 245 VI GD N + N + F ++ Sbjct: 142 QGKNLVICGDLNTAHKEIDLARPKQNEDVSGFLPIEREWVSKFLDNGYVDTFRMLHENEK 201 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +DYF +++ + + SDHC Sbjct: 202 EKYTWWSYRTRARERNVGWRLDYFFVNEEFKDNVRASYIISEV-----------MGSDHC 250 Query: 297 PISIDYD 303 PI+++ + Sbjct: 251 PIALEIE 257 >gi|85858539|ref|YP_460741.1| exodeoxyribonuclease III [Syntrophus aciditrophicus SB] gi|85721630|gb|ABC76573.1| exodeoxyribonuclease III [Syntrophus aciditrophicus SB] Length = 267 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 79/305 (25%), Gaps = 72/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ ++N+N S ++ + + D+ +QE +A Sbjct: 9 FKIATYNVN----------------SIRSRLHIILSWLEENRPDVFCMQETKVADA---- 48 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + +Y L G D Sbjct: 49 ------RFPADAFTVAGYHVVFRGMKQYNGVAIAS-LEKPENVTYGLGGEADDADEDRLI 101 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 AV + V++ ++ N +P + Q ++++ QK S Sbjct: 102 AAVY-------SGVPVINTYVP------QGRNRENPQFAYKLQWYARFREYLVQKWSSDA 148 Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V GD N + +D D + + F K Sbjct: 149 PLVWCGDLNVAPEQIDVHDPKRLLGHVCFNPEVWDAFDRVKSWGLEDLFRKHHPGEVECY 208 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ + + D ++ SDH + Sbjct: 209 TFFDYRVPRSVERKLGWRIDHILSTPALAAHCDSCNI-------DMNPRMAEKPSDHTIL 261 Query: 299 SIDYD 303 ++ Sbjct: 262 VAEFT 266 >gi|15807284|ref|NP_296014.1| hypothetical protein DR_2293 [Deinococcus radiodurans R1] gi|6460101|gb|AAF11839.1|AE002061_6 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 322 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 30/287 (10%), Positives = 82/287 (28%), Gaps = 58/287 (20%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 ++R++++N+ + + L + DAD++ LQE Sbjct: 92 PQADGELRVLTYNV---------------ARGSQGTAAALLSTLQASDADLILLQETNLL 136 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + ++ + T+ + + + Q + + G+ +F Sbjct: 137 DPAKGLALRSGLSGYALTQGRE--------------VWTLSRWPVLRQTQHAVPGSTRTF 182 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 + + +G+ + V++ HL + +L + + + + Sbjct: 183 AETWVKGP-------DGRTLRVVNAHLGTVLITSALRGDTAKVRRTAQARREQVALLCRI 235 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 P ++ GD N ++ + + + I Sbjct: 236 AAHEPGPVLLGGDLNTPP-----RGRLYRRLTGCFGPDAHDRAGQGPGWTF--PGLLLRI 288 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D+ ++ S SDH P+ ++Y + Sbjct: 289 DHLLVRDLRPTRARVLSM---------------AGSDHRPLLVEYRW 320 >gi|50546895|ref|XP_500917.1| YALI0B15147p [Yarrowia lipolytica] gi|74635405|sp|Q6CEJ6|CCR4_YARLI RecName: Full=Glucose-repressible alcohol dehydrogenase transcriptional effector; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase gi|49646782|emb|CAG83167.1| YALI0B15147p [Yarrowia lipolytica] Length = 705 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 83/337 (24%), Gaps = 56/337 (16%) Query: 24 VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++S+N + + + L + D+DI+ QE+ + Sbjct: 341 FTVMSYNTLCDKYTTVQMHGYTPLWALGWKHRSETLLKEVIGYDSDILCFQEVDGASFED 400 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDI-----HTAIAVRKKNVRVLQQ---------- 126 PK + ++ S AI + K+ ++++ Sbjct: 401 FWSPKLHQLGYAGLYHPKTRARTMSKEKDAKRVDGCAIFYKTKSFCLIEKLSLDFSSLAL 460 Query: 127 ---SYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDS--------- 172 + + + A+ L+E G+KI V + HL + Sbjct: 461 KNNDFKKTADTYNRVLNKDNIALIALLEHVTTGQKIIVTNTHLHWDPAFNDVKLIQVALL 520 Query: 173 -----LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------- 217 S + + + +P VI GDFN + Sbjct: 521 LDEVEKFAERVAKDSNRVSARNQDGNNVKYESGKKLPLVICGDFNSTTDSGVYSLFSQGT 580 Query: 218 ---------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN-AY 267 + ++ +L N IDY N Sbjct: 581 VTNHKDMSGRAYGKFTDEGMNHGFTLKSAYSNIGELAFTNYTPNFVDVIDYVWYSSNALS 640 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + SDH + ++ F Sbjct: 641 VRGLLGGIDPDYTSNMVGFPSVHYPSDHISLLAEFSF 677 >gi|326772453|ref|ZP_08231737.1| exodeoxyribonuclease III [Actinomyces viscosus C505] gi|326637085|gb|EGE37987.1| exodeoxyribonuclease III [Actinomyces viscosus C505] Length = 269 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 82/309 (26%), Gaps = 69/309 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N + + + + D D + +QE+ Sbjct: 1 MRLATWNVN----------------SIRTRVDRVLAFLEREDIDALAMQEIKCRPD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ + + + G ++ Sbjct: 41 ------QFPVEPFEAAGYELAIHGLNQWNGVAIASRVG-LDDVAVSFPGQPAWAAKPEAE 93 Query: 144 RAVELLVE-------INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 VE + + + +++ + L TY + L+D + Sbjct: 94 PVVEARALGATVGAASDAAPVRLWSLYVPNGRELTHPHYTYKLD------WLRVLRDDVA 147 Query: 197 QK--KESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFP 238 + +P + GD+N + F + + Sbjct: 148 AWLEADPDLPLALVGDWNVAPRDEDVWDMSAFEGATHVSEPEREAFAAFAEVGMREVTRE 207 Query: 239 KEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + + + LR + ID+ + + D + +GK SD Sbjct: 208 RVTNYTYWDYQKLRFPRNEGMRIDFVYASPALAGRVTDAAI-------DRDERKGKGASD 260 Query: 295 HCPISIDYD 303 H P+ ++ Sbjct: 261 HVPVIVEVS 269 >gi|284054173|ref|ZP_06384383.1| Endonuclease/exonuclease/phosphatase [Arthrospira platensis str. Paraca] Length = 498 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 90/304 (29%), Gaps = 31/304 (10%) Query: 22 QKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 V++ ++N+ L + + + T + + + + ADI+ QE+ A Sbjct: 171 NSVKIGTFNLYNLVLPNLTYYETRQYTPELYQQKKTWVSRQLETMQADIIGFQEIFHPEA 230 Query: 80 VAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + ++ + + K I + + +S + Sbjct: 231 LQEILAATPFYDHAHLITTNPRGDKPVVGLCSKLPIISWQIYDKFPPESQIDIEGTIIPI 290 Query: 139 RAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYS----------PSCSLLSQQ 187 +R + + +++ + + V +HLKS + S + + Sbjct: 291 NHFSRPVLAVNIQLKDRLQCTVFVVHLKSQRPQITEGVDSQDPVEKAKGKVRSLLRRAAE 350 Query: 188 AQWLKD-WITQKKESLVPFVIAGDFNRK---------INYLGNNDDFWKTIDPNDSLIRF 237 A L+ + S P ++ GDFN + +K D L + Sbjct: 351 ATALRYIMLKTWSHSQNPIILLGDFNDSDLAITTKIMAGDISWKKTRFKPNHNQDELRLY 410 Query: 238 PKEKDSRCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ++ +D+ ++ Q ++ + + Sbjct: 411 SVKDIQARQSYRDCYYTYMYNGYYETLDHILVSQELVVENSRQVGRVSYVALFNDHLVDQ 470 Query: 291 RLSD 294 LSD Sbjct: 471 SLSD 474 >gi|197335619|ref|YP_002156266.1| nuclease [Vibrio fischeri MJ11] gi|197317109|gb|ACH66556.1| nuclease [Vibrio fischeri MJ11] Length = 884 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 40/383 (10%), Positives = 95/383 (24%), Gaps = 104/383 (27%) Query: 23 KVRLVSWNINTLSEQ-----EGVSLWKNSVKRTTSDYT----LLRQYAKNLDADIVFLQE 73 + + S+N+ + +N + D+ + +DADI+ L E Sbjct: 479 DLTITSFNVLNYFTSVAAGGDANPTGQNRGATSADDFAIQQAKILSALVAIDADIIGLME 538 Query: 74 MGSYNAVAKVF--------------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 + + ++ + + + ++ I A+ R Sbjct: 539 VENNGFGENSAINDLTTALNAQFEDEEDHYKYIEIKNKDKYQGEYLGSDAIMVALLYRPS 598 Query: 120 NVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEING--KKIWV 159 V++ + + + R ++ + + + V Sbjct: 599 EVKLKGKARVIKTPEQHIAENTITRDNNGTIEFNPAYDKYQRHSLVQKFMVKDAKEPLTV 658 Query: 160 LDIHLKSFCF-----------LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208 + HLKS + A+ + D + K +I Sbjct: 659 VVNHLKSKGSECIEQWQNFEEDKDPSDLQGNCNRFRVSAAKAIGDELESVKGD---VLIL 715 Query: 209 GDFNR-----------KINYLGNNDDFW-----------------------KTIDPNDSL 234 GD N + N D + + + Sbjct: 716 GDMNAYGMEDPLLTLTDYSQEKYNRDIFTASYTTLGTDKDGKPLPYETTGSQISQGYGYI 775 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291 + + +D+ + +++ K + + I E ++ + Sbjct: 776 NLNTLRHGTDTFSYTYSGELGNLDHALANKSLAKRVAEIEDWHINAAESNLFEYSPKYTG 835 Query: 292 ----------LSDHCPISIDYDF 304 SDH PI I D+ Sbjct: 836 DMVKYNDMYSASDHDPIVITLDY 858 >gi|15604130|ref|NP_220645.1| exodeoxyribonuclease III (xthA1) [Rickettsia prowazekii str. Madrid E] gi|3860822|emb|CAA14722.1| EXODEOXYRIBONUCLEASE III (xthA1) [Rickettsia prowazekii] gi|292571858|gb|ADE29773.1| Exodeoxyribonuclease III [Rickettsia prowazekii Rp22] Length = 261 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 38/307 (12%), Positives = 79/307 (25%), Gaps = 72/307 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V+WNIN+L LLR+ A DI+ LQE N++ Sbjct: 1 MKVVTWNINSL----------------RLRIDLLRKLAYEHQPDIILLQETKVANSL--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + S + +A+ K + L R Sbjct: 42 ------FPLEVIKNIGYEHVIYSGQKSYNGVAIISKFPLNNVFALELYNGDK-------R 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ ++ +V D + + + + +++W T + Sbjct: 89 HIAAIVNDLEIHNFYV-------PAGGDIPDVEVNFKFKHKLEYVRLMREWFTANRTKND 141 Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 +I GD N + + + + Sbjct: 142 KIIIVGDLNIAPHEHDVWSSKQMQNVISHTDIERSLLIELQNSLGFIDSSRYFISLNKKC 201 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + N L + R SDH P Sbjct: 202 YTWWSYRNVDWKKSNRGRRLDHIWVSDNLKYAL-------FSMHLLSEARDWFRPSDHVP 254 Query: 298 ISIDYDF 304 + ++F Sbjct: 255 YLVTFNF 261 >gi|226365708|ref|YP_002783491.1| exodeoxyribonuclease [Rhodococcus opacus B4] gi|226244198|dbj|BAH54546.1| exodeoxyribonuclease [Rhodococcus opacus B4] Length = 268 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 34/279 (12%), Positives = 77/279 (27%), Gaps = 55/279 (19%) Query: 52 SDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 + L ++ + +AD+V LQE + P ++ ++ Sbjct: 16 AARKGLTEWMERTEADVVCLQETRASDEQLAETLAPALEGGWNLASAE--------PSSK 67 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 +A+ + + +G D A R +E + + V ++L S Sbjct: 68 GRNGVAILSRKPADAVR----VGHGDEEFAAAGRY-----IEADFDDLTVASLYLPSG-- 116 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG---------- 219 ++ + A++L + V+ GD+N L Sbjct: 117 -EAQTPRQEEKERFMDSFARYLTVTAEAAVAAGRHVVVCGDWNIAHTELDLKNWKTNKKN 175 Query: 220 ------NNDDFWKTIDPNDSLIRFPKEKDSR-CNANKNLRNK---------IPIDYFVMD 263 + + + + IDY + Sbjct: 176 SGFLPHEREWMSALFAEGAHWADVVRLLEPDVAGPYSWWSYRGKAFDNDSGWRIDYQIAT 235 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + Q + ++ +R SDH P+++ Y Sbjct: 236 RELAERAKQA-------VVERAETYDQRWSDHAPVTVQY 267 >gi|121635738|ref|YP_975983.1| putative nuclease [Neisseria meningitidis FAM18] gi|120867444|emb|CAM11216.1| putative nuclease [Neisseria meningitidis FAM18] gi|254671914|emb|CBA04230.1| putative endonuclease [Neisseria meningitidis alpha275] gi|308390182|gb|ADO32502.1| exodeoxyribonuclease [Neisseria meningitidis alpha710] gi|325131323|gb|EGC54034.1| exodeoxyribonuclease III [Neisseria meningitidis M6190] gi|325133258|gb|EGC55924.1| exodeoxyribonuclease III [Neisseria meningitidis M13399] gi|325137352|gb|EGC59940.1| exodeoxyribonuclease III [Neisseria meningitidis ES14902] gi|325141356|gb|EGC63839.1| exodeoxyribonuclease III [Neisseria meningitidis 961-5945] gi|325143494|gb|EGC65815.1| exodeoxyribonuclease III [Neisseria meningitidis M01-240013] gi|325199171|gb|ADY94627.1| exodeoxyribonuclease III [Neisseria meningitidis G2136] gi|325206984|gb|ADZ02437.1| exodeoxyribonuclease III [Neisseria meningitidis M04-240196] Length = 259 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S N+N + + +Y ADIV +QE+ + A Sbjct: 2 LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 KN + ++ +AV K +G R Sbjct: 47 DMKNPHGMHGHWHCAEKRG--------YSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + ++ V+ ++L S + + + + + K Sbjct: 95 F-----VRCDFDRLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNEGR 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248 V+ GD+N + + + + Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGY 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY ++ + + ++ SDH P+ Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 251 Query: 300 IDYDF 304 ++YD+ Sbjct: 252 MEYDY 256 >gi|116628238|ref|YP_820857.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus LMD-9] gi|116101515|gb|ABJ66661.1| Exonuclease III [Streptococcus thermophilus LMD-9] gi|312278865|gb|ADQ63522.1| Exonuclease III [Streptococcus thermophilus ND03] Length = 275 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 83/305 (27%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + R + +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTGDSTRAQLSR------AVIDTLVTENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + S + + K +YP +GA + G Sbjct: 55 KHLQILEDYFPDYVITWRSSVEPARKGYAGTMFLYKKELTPVITYPEIGAPSTMDCEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V ++ + + L ++ Sbjct: 114 -----IITLEFDTFFVTQVYTPNAGDGLKRLLERQIWDEKYADYLAEL--------DAQK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + + + A Sbjct: 161 PVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERAGFTNLLNKGFIDTYRHLNGDVTGAY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ +I+ + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVIKSNMIDSGDRQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 VLEID 274 >gi|296225529|ref|XP_002758534.1| PREDICTED: deoxyribonuclease gamma-like isoform 1 [Callithrix jacchus] Length = 305 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 91/290 (31%), Gaps = 32/290 (11%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN- 78 A +++ S+N+ + E S + + ++ + K DI+ + E+ N Sbjct: 17 SALALKICSFNVRSFGE---------SKQEDQNAMDVIVKVIKRC--DIILVMEIKDSNN 65 Query: 79 ----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + N+ + + R++ + + A ++K V V ++SY + Sbjct: 66 RICPMLMEKLNGNSRRGMRYNYVISSRLGRNTYKEQY-AFLYKEKLVSV-KRSYQYHDYQ 123 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D + +R + + + I S+ L W Sbjct: 124 DGDADVFSREPFVVWFQSPYTVVKDFVIVPLHTTPETSV----KEIDELFDVYMDMKHRW 179 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 F+ GDFN +Y+ + + + +++ Sbjct: 180 ------KAENFIFMGDFNAGCSYVPKKAWKNIRLRIDPRFVWLIGDQEDTTVKKSTNCAY 233 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 I + Q ++ +S S + + S K L SDH P+ Sbjct: 234 DRI--VLRGQEIVSSIVPKSTSVFDFQKAYKLSEEKALDVSDHFPVEFKL 281 >gi|222112176|ref|YP_002554440.1| endonuclease/exonuclease/phosphatase [Acidovorax ebreus TPSY] gi|221731620|gb|ACM34440.1| Endonuclease/exonuclease/phosphatase [Acidovorax ebreus TPSY] Length = 279 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 91/294 (30%), Gaps = 51/294 (17%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P ++ VA ++++ N++ LR+ + + AD+VFLQE+ Sbjct: 29 PSSSPVA--FKVLTVNVHKGFTSFNRRFM----------LHELREAVRQVSADLVFLQEV 76 Query: 75 GSYNAVAKV----FPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + FP+ F + + + D H A+ K V +++ Sbjct: 77 LGTHQRHAGRVTNFPQEPHYEFLADSIWTQYAYGRNAVYTDGHHGNALLSKFPIVHYENH 136 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + + R + +++ V I + + QQ Sbjct: 137 DISVSG-----PERRGMLHCVLQPPQHARPVHAICVHLGL-----------QEAHRQQQL 180 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + + + P ++AGDFN +D + ++ ++ Sbjct: 181 RRVSALVHSFPTQD-PVIVAGDFNDWRGRA--HDVLQREAGLHEVFVQACGRA---VRTF 234 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +P+D + + + + RLSDH P++ + Sbjct: 235 PASLPLLPLDRIYVRGTS-----------VHTPMSLPRRPWNRLSDHAPLAAEI 277 >gi|160947302|ref|ZP_02094469.1| hypothetical protein PEPMIC_01235 [Parvimonas micra ATCC 33270] gi|158446436|gb|EDP23431.1| hypothetical protein PEPMIC_01235 [Parvimonas micra ATCC 33270] Length = 250 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 32/303 (10%), Positives = 75/303 (24%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R +SWN+N L Y ++AD LQE+ + Sbjct: 1 MRFISWNVNGLRACIKKGF---------------LDYFNEINADFFCLQEIKMSEGQLDL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +R ++ A+ K + + + D+ R Sbjct: 46 ELEGYETFYNYAQR-----------KGYSGTAIFTKFKPLSVKYGMGMEEHDNEGRL--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +++ + + ++++ Sbjct: 92 ------ITLEYDDFFLVTCYTPN-------SKQELLRLDYRMVWEDAFRNYL-LDLNKTK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N + + + F + N Sbjct: 138 SVIVCGDLNVAHKEIDLKNPKTNRKNAGFTDEEREKMSILLDSGFTDTFRYFYPDKENEY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ ++ L+ + + SDHCP+ Sbjct: 198 SWWSYFGKSRERNTGWRIDYFLTSKDMDDRLVDAQIHQSIL-----------GSDHCPVY 246 Query: 300 IDY 302 ++ Sbjct: 247 LEI 249 >gi|308805699|ref|XP_003080161.1| unnamed protein product [Ostreococcus tauri] gi|116058621|emb|CAL54328.1| unnamed protein product [Ostreococcus tauri] Length = 356 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 86/309 (27%), Gaps = 43/309 (13%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +R++SWN+ L+ + + + D+V LQE+ + Sbjct: 47 GTLRVMSWNLQLLAGPFSGQGGFRADLIKRARKIVQNIIVVAETVDVVCLQEVWDDASRT 106 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + V K V +RA Sbjct: 107 VLRSGL-----------ATTFPYIFSPAAKCGLMVCSKASHVCNHFVKFTHRGGIEARAF 155 Query: 142 NRRA--VELLVEINGKKIWV---LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + L + N + V L+ HL+S + +S + + +++ Sbjct: 156 EKGVSTTYLRLAQNDACVRVAIILNTHLQSDYWCSGRVARFSQLVCVRESFMRAVRE-CR 214 Query: 197 QKKESLVPFVIAGDFNRKINYLGNN-----------DDFWKTIDPNDSLIRFPKEKDSRC 245 + ++AGD N + D ++ +DS R Sbjct: 215 GNGYVVERVLLAGDINVEHGSAEYEHMMHSIFPGAIDLMNSPLNDDDSFRLTFPVARWRH 274 Query: 246 NA--------NKNLRNKIPIDYFV------MDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 +L ++ IDY + + Q + +RG+ Sbjct: 275 YILKCGRESRYFDLEPRVRIDYVMDLTPMGVSQGVPPRHKHVDSGYVNRA-LCRDARGRA 333 Query: 292 LSDHCPISI 300 LSDH PI Sbjct: 334 LSDHFPIVA 342 >gi|317179707|dbj|BAJ57495.1| exodeoxyribonuclease [Helicobacter pylori F30] Length = 250 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 81/303 (26%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++DAD+ +QE + + + Sbjct: 1 MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + + D R Sbjct: 42 QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINMEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + ++++++ + S + + + L+ Sbjct: 91 -----VVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFRKFLKVLEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|262381285|ref|ZP_06074423.1| metallophosphoesterase [Bacteroides sp. 2_1_33B] gi|262296462|gb|EEY84392.1| metallophosphoesterase [Bacteroides sp. 2_1_33B] Length = 628 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 85/310 (27%), Gaps = 66/310 (21%) Query: 1 MIRKYVLALVFF-LVPCTASVAQ--------KVRLVSWNINTLSEQEGVSLWKNSVKRTT 51 M + ++ A+V +P ++AQ +R++S+NI + V+ Sbjct: 10 MRKWFIWAIVMIGCLPINKALAQQSGDAERNTLRIMSYNIRNGRGMDEVT---------- 59 Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 D + + D+V +QE+ S + + ++ + Sbjct: 60 -DLGRIADAICKVAPDVVAVQEVDSVTGRSGGIDVLRTLGERTLM-FPTYAPAIDFDGGK 117 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 + + K V + L G R R + + E + HL Sbjct: 118 YGVGMLSKEKPVSYRYIALPG------REEERVLLWVEFE----RYIFCCTHLSLTP--- 164 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S +L ++A + + P IAGD+N + I Sbjct: 165 ---EDRMLSLPILRREAAF----------AHKPLFIAGDWNATAHSP--------FITEI 203 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + +DY + + S Sbjct: 204 SKDFQLLSNPKQATFPASTPD--SCLDYIAGYVKNGQPFTRLSAWV---------PEEAV 252 Query: 292 LSDHCPISID 301 SDH P+ + Sbjct: 253 ASDHRPVVTE 262 >gi|256840681|ref|ZP_05546189.1| metallophosphoesterase [Parabacteroides sp. D13] gi|256737953|gb|EEU51279.1| metallophosphoesterase [Parabacteroides sp. D13] Length = 628 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 85/310 (27%), Gaps = 66/310 (21%) Query: 1 MIRKYVLALVFF-LVPCTASVAQ--------KVRLVSWNINTLSEQEGVSLWKNSVKRTT 51 M + ++ A+V +P ++AQ +R++S+NI + V+ Sbjct: 10 MRKWFIWAIVMIGCLPINKALAQQSGDAERNTLRIMSYNIRNGRGMDEVT---------- 59 Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 D + + D+V +QE+ S + + ++ + Sbjct: 60 -DLGRIADAICKVAPDVVAVQEVDSVTVRSGGIDVLRTLGERTLM-FPTYAPAIDFDGGK 117 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 + + K V + L G R R + + E + HL Sbjct: 118 YGVGMLSKEKPVSYRYIALPG------REEERVLLWVEFE----RYIFCCTHLSLTP--- 164 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S +L ++A + + P IAGD+N + I Sbjct: 165 ---EDRMLSLPILRREAAF----------AHKPLFIAGDWNATAHSP--------FITEI 203 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + +DY + + S Sbjct: 204 SKDFQLLSNPKQATFPASTPD--SCLDYIAGYVKNGQPFTRLSAWV---------PEEAV 252 Query: 292 LSDHCPISID 301 SDH P+ + Sbjct: 253 ASDHRPVVTE 262 >gi|254495900|ref|ZP_05108809.1| endonuclease/exonuclease/phosphatase family protein [Legionella drancourtii LLAP12] gi|254354882|gb|EET13508.1| endonuclease/exonuclease/phosphatase family protein [Legionella drancourtii LLAP12] Length = 221 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 86/253 (33%), Gaps = 40/253 (15%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAK----VFPKNTWCIFYST--ERLINHSKRDSNNDI 110 +R+ L+ D VFLQE+ + + +P + C + + ++K Sbjct: 1 MREAITELNPDFVFLQEVQGEHRKRQKRINAWPDSPQCEYIAENIWPHYAYAKNAIYQSG 60 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 H A+ K + L R +R + + ++G + +L +HL F Sbjct: 61 HHGNAILSKYAFRRIDNINLASI-----RRASRGILHAQLMVDGATVHLLCVHLGLFK-- 113 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 ++QA L I + P ++AGDFN N L F + ++ Sbjct: 114 -----------RERAEQATALMRRIKEVVPLNEPLLMAGDFNDWRNVLS--QPFAEDLNV 160 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 ++ + + + +R + +D + + + Sbjct: 161 EEAFVSLEGQH---ARSFPAIRPALCVDRVYFRGMRVQEVAC-----------LQGKPWR 206 Query: 291 RLSDHCPISIDYD 303 LSDH P+ ++ Sbjct: 207 MLSDHLPLYARFE 219 >gi|256394880|ref|YP_003116444.1| exodeoxyribonuclease III Xth [Catenulispora acidiphila DSM 44928] gi|256361106|gb|ACU74603.1| exodeoxyribonuclease III Xth [Catenulispora acidiphila DSM 44928] Length = 294 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 30/273 (10%), Positives = 66/273 (24%), Gaps = 56/273 (20%) Query: 59 QYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 ++ K AD+V LQE+ A + W + + +A+ Sbjct: 24 EWLKATPADVVCLQEVRAEPDQFPADLRAPEGWHTLVAP----------AAAKGRAGVAL 73 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + + D+ R + + + + ++L + + Sbjct: 74 FSRVAPTTTRIGFGTPEFDTAGR-------YAEMHLP--TLTIASLYLPTGEVGTERQAE 124 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------YLGN 220 + L T+ ++ +I GD+N + Sbjct: 125 KERFMAGFHAHLSALS---TEAAQTGRAILICGDWNIAHDKADIKNWRANQKSSGFLPEE 181 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLI 271 + + IDY + N Sbjct: 182 RQWLTSVLTEAGYADVVRNLHPGVDGPYSWWSFRGKAFDNDTGWRIDYQMASANLAALAT 241 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + +R SDH P++ YD+ Sbjct: 242 SA-------KVERAATYAERWSDHAPVTCAYDW 267 >gi|223932412|ref|ZP_03624414.1| exodeoxyribonuclease III Xth [Streptococcus suis 89/1591] gi|330832647|ref|YP_004401472.1| exodeoxyribonuclease [Streptococcus suis ST3] gi|223898866|gb|EEF65225.1| exodeoxyribonuclease III Xth [Streptococcus suis 89/1591] gi|329306870|gb|AEB81286.1| exodeoxyribonuclease [Streptococcus suis ST3] Length = 275 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 82/306 (26%), Gaps = 56/306 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + R + DADI+ +QE + Sbjct: 1 MKLISWNIDSLNAALTAESPRALLSR------AVIDTLVTEDADIIAIQETKLSDKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ S + + KN ++P +GA + G Sbjct: 55 KHLEILESYFPGYANTWRSSVEPARKGYAGTLFLYKNHLSPTITFPEIGAPTTMDSEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V ++ + + L +S Sbjct: 114 -----IITLEFDDFYVTQVYTPNAGDGLKRLADRQIWDVQYADYLAKL--------DSHK 160 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N + + + F NA Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRQSPGFTDEERQGFTNLLAKGFTDTFRHLHGDVLNAY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY+++ + + + + DH PI Sbjct: 221 TWWAQRSRTSKINNTGWRIDYWLVSDRIADKVSKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYDF 304 ++ F Sbjct: 270 VMEISF 275 >gi|116748060|ref|YP_844747.1| endonuclease/exonuclease/phosphatase [Syntrophobacter fumaroxidans MPOB] gi|116697124|gb|ABK16312.1| Endonuclease/exonuclease/phosphatase [Syntrophobacter fumaroxidans MPOB] Length = 291 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 37/283 (13%), Positives = 85/283 (30%), Gaps = 34/283 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R++++N+ ++ +G + R ++ + ++ QE + + Sbjct: 40 MRVMTFNLRFENDSDGEN-------RWGCRRDMVARIVARYGPSVLGTQEGMVSQ-LRFL 91 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y+ R + S + + + P + S+ A R Sbjct: 92 EEHLQGYELYAPRRFWDESCQYPTLFYRRDVMRPLEGDEFWLSLTPRVHRSKSWDSAFPR 151 Query: 144 RAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 E +G+ +WV HL + + QA+ + +W Sbjct: 152 MISFGRFESLEDGRAVWVGVTHLDHIG------------DAARAAQAERVAEWAC---GR 196 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 ++ GDFN + D ++L R E + + +D+ + Sbjct: 197 DGSCILMGDFNDVPGSPAHRLLTDVLQDCWEALGRSEDESGMTYHKFTGIPQIARMDWVL 256 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ + + G+ SDH P D + Sbjct: 257 ASRDM---------RVLDQVVVRDQESGRYPSDHFPCFADVKW 290 >gi|67526289|ref|XP_661206.1| hypothetical protein AN3602.2 [Aspergillus nidulans FGSC A4] gi|74596539|sp|Q5B778|CCR4_EMENI RecName: Full=Glucose-repressible alcohol dehydrogenase transcriptional effector; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase gi|40740620|gb|EAA59810.1| hypothetical protein AN3602.2 [Aspergillus nidulans FGSC A4] gi|259481873|tpe|CBF75800.1| TPA: Glucose-repressible alcohol dehydrogenase transcriptional effector (EC 3.1.13.4)(Carbon catabolite repressor protein 4)(Cytoplasmic deadenylase) [Source:UniProtKB/Swiss-Prot;Acc:Q5B778] [Aspergillus nidulans FGSC A4] Length = 675 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 88/357 (24%), Gaps = 69/357 (19%) Query: 16 CTASVAQKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 A+ KV ++S+N S Q + V + + D DI+ LQE Sbjct: 301 TAATSPDKVSVLSYNTLCDSSATQSHYGYAPSRVLSWEFRRETILNELRAHDPDIICLQE 360 Query: 74 MG----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 + + ++ + +F+ R + + D+ A + +L + Sbjct: 361 IDQGSYNEFFREQLAYSDYKGVFWPRGRAMGMQEEDAKGVDGCATFFKGSKFILLDKQVI 420 Query: 130 LLGAK-----------DSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDS-- 172 G D ++R + + ++V G + +++ HL Sbjct: 421 NFGQTAVRRPDAKGQDDIYNRLWQKDHIAVIVFLENRQTGSRFIIVNAHLYWDPAFKDVK 480 Query: 173 ---------------------LENTYSPSCSLLSQQAQWL----KDWITQKKESLVPFVI 207 T + Q + +P + Sbjct: 481 LIQTAILMEEITKHSEKYAKWPPCTDKAAFRFREAQGEQTMPEPAPSAEYASGDQIPLFM 540 Query: 208 AGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRC-----NA 247 GDFN N + + F + Sbjct: 541 CGDFNSSPGSAAYNLIANGGLIEEHPDLEKRMYGNLSKVGMTHPFKLKSAYGAIGELSFT 600 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISIDYD 303 N K +DY N + Y + SDH + ++ Sbjct: 601 NYTPDFKDILDYIWYSSNTVHVSGLLGEVDKDYLQRVPGFPNYHFPSDHIALLAEFS 657 >gi|317182729|dbj|BAJ60513.1| exodeoxyribonuclease [Helicobacter pylori F57] Length = 250 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 81/303 (26%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++DAD+ +QE + + + Sbjct: 1 MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + + D R Sbjct: 42 QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINMEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + ++++++ + S + + + L+ Sbjct: 91 -----VVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFRKFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTHLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|261200457|ref|XP_002626629.1| endonuclease/exonuclease/phosphatase [Ajellomyces dermatitidis SLH14081] gi|239593701|gb|EEQ76282.1| endonuclease/exonuclease/phosphatase [Ajellomyces dermatitidis SLH14081] Length = 297 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 35/293 (11%), Positives = 77/293 (26%), Gaps = 21/293 (7%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+++ NI + K R L ++++ + LQE+ Sbjct: 8 PLRILTHNIRY-ATSAPFRGEKPWKDRKQRLINELHYHSRHNPETFICLQEVLHVQLTDI 66 Query: 83 VFPKNT---------WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + N W + S A+ +++ V P + Sbjct: 67 LSGLNPNANKDATAEWAYIGVGRDDGKQAGEFSPIFYRPAVWELEESKTVWLSETPSVP- 125 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + + R + + + VL ++ D + + L+ Sbjct: 126 SRGWDASSVRIITIGVFKHIVSRKRVLGMNTHL---DDQGSKSRYEAAKLILGLINQFLT 182 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 ++ +AGDFN + N + + +D + + Sbjct: 183 KNQLAGRNINGVFLAGDFNSEENQEAYSVLTAADSQLVDAQKQVNAAFRYGSENTYTGFG 242 Query: 251 LR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + + + + G SDH + D Sbjct: 243 YEDEGPKRIDYVLFGPQRGANM--SWIVDGYAVLPNKFDDGVLNSDHRAVVAD 293 >gi|118592105|ref|ZP_01549499.1| hypothetical protein SIAM614_25552 [Stappia aggregata IAM 12614] gi|118435401|gb|EAV42048.1| hypothetical protein SIAM614_25552 [Stappia aggregata IAM 12614] Length = 323 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 42/332 (12%), Positives = 88/332 (26%), Gaps = 60/332 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY------ 77 ++L ++N+ + E ++ T LR L+ADI+ LQE+ + Sbjct: 1 MKLATFNMESFGED------RHDPDALTPRLDALRPKILELEADILCLQEVNAQKIKGMA 54 Query: 78 ----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 A+ + + F+ K + V + S A Sbjct: 55 ARQFQALDLLLEGTPYEGFHRATSERLSGK---GPGDRHNLVVLSRFPITRFFSLYQTHA 111 Query: 134 KDSFSRAGN--------------RRAVELLVEIN-GKKIWVLDIHLKSF------CFLDS 172 + R +++ ++I G+ + V +HL++ Sbjct: 112 HPPQWQPKTAEPAYHGPQTILFDRPVLQVEIDIGTGRPLHVFCVHLRAPVAAMIRGGKGE 171 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQ-----------KKESLVPFVIAGDFNRKIN----- 216 S S Q LK V+ GDFN Sbjct: 172 DRTWSSVSAWAEGYQLSVLKQTAQALELRLAVESLFDANENSHIVLVGDFNATGETGTLR 231 Query: 217 --YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 +D + + + +D+ + + I Sbjct: 232 LLRADPDDTGSPKLAGRRLYQLDASLPAEKRQTVIHKGKGQALDHILASASMAHRTIDLK 291 Query: 275 FSEILYNED--DIKSRGKRLSDHCPISIDYDF 304 + ++ D + S H + +++F Sbjct: 292 VFNVGLPDEVFDAEEDTYAGSFHAAMLAEFEF 323 >gi|319411745|emb|CBQ73789.1| conserved hypothetical protein [Sporisorium reilianum] Length = 300 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 95/302 (31%), Gaps = 34/302 (11%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 V + + V+ N+ L + + ++ + + + D++ +QE Sbjct: 19 VSTAPTSTDSLTAVTMNVAGLPAILNGNGEGDK----QANSVAIGKKFVEYNYDVINVQE 74 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 +Y+A + R + ++T + N+ ++ S L Sbjct: 75 DFNYHA-------YIYNNDDHPYRTPTSGGVPFGSGLNTLSTIAFTNLDRVKWSKCNLNE 127 Query: 134 KDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 D + + + +++ G ++ V ++H+ + S + S AQ + Sbjct: 128 GDCLT---PKGYTVVTLQLPTGGEVDVYNLHMDAGSDDGD-------SAARTSNFAQVAQ 177 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNN----------DDFWKTIDPNDSLIRFPKEKD 242 ++ + ++ GD N + + D W + Sbjct: 178 AIASRSDAAGRAVIVMGDTNSRYTRPKDGLVQFLAETKLTDTWVELVRGGKAPASTDAAL 237 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + +D + ++ L + S+GK LSDH PI + + Sbjct: 238 LCADPIPTTTDCEVVDKVLYKNSSTVTLRPSDWQ--YLGTQFTDSQGKPLSDHTPILVKF 295 Query: 303 DF 304 + Sbjct: 296 AY 297 >gi|209694891|ref|YP_002262819.1| putative exported nuclease [Aliivibrio salmonicida LFI1238] gi|208008842|emb|CAQ79049.1| putative exported nuclease [Aliivibrio salmonicida LFI1238] Length = 890 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 38/384 (9%), Positives = 94/384 (24%), Gaps = 104/384 (27%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTT---------SDYTLLRQYAKNLDADIVFLQ 72 + + + S+N+ ++ N + + +DADI+ L Sbjct: 483 EDLTITSFNVLNYFTSVSINGDANPTGQNRGATTADEFAIQQAKILSALTAIDADIIGLM 542 Query: 73 EMGSY--------NAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 E+ + + + V ++ + + ++ I A+ R Sbjct: 543 EIENNGFGENSAIHDLTAVLNAQFEDKEDHYKYVEIDAADKYQGEYLGSDAIMVALLYRP 602 Query: 119 KNVRVL------------------QQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIW 158 VR+ + + R ++ + + + Sbjct: 603 DKVRLEGDARVIKTPEQHVTANTVTRDNNGTIESNPAYDKYQRHSLVQEFIVKEAKEPLT 662 Query: 159 VLDIHLKSFCF-----------LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207 V+ HLKS + + + D ++ + +I Sbjct: 663 VVVNHLKSKGSECIEQWQNFNEDSEAPDLQGNCNRFRVSAVKAIGDELSTVEGD---ILI 719 Query: 208 AGDFNRKINYLG-----------NNDDFW-----------------------KTIDPNDS 233 GD N + D + + Sbjct: 720 LGDMNAYGMEDPLLTLTDYSPDKYDRDIFTASYTTLGNDTAGNPIPYEETGSQIKKGYGY 779 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-- 291 L + + +D+ + +++ K + Q I E ++ + Sbjct: 780 LNLNTLLHSTETFSYTYSGELGNLDHALANESLAKRVTQIEDWHINATESNLFEYSSKYT 839 Query: 292 -----------LSDHCPISIDYDF 304 SDH P+ I ++ Sbjct: 840 GDMAKYNDMYSASDHDPVVISLEY 863 >gi|171692387|ref|XP_001911118.1| hypothetical protein [Podospora anserina S mat+] gi|170946142|emb|CAP72943.1| unnamed protein product [Podospora anserina S mat+] Length = 294 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 84/288 (29%), Gaps = 20/288 (6%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA- 81 +RL+++N+ + + V + R + L+ D+ + LQE+ Sbjct: 16 PIRLITFNVRY-ATKTPVPGEEPWSIRCPKLCSQLKFITSGQDSPFICLQEVLYSQLTDI 74 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + N W + S ++ P L +K + A Sbjct: 75 QDRLGNAWRHIGQGREDGKQAGEFSPIFFRVDHWECERQKTYWLSKTPDLPSK-GWDAAL 133 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R L V+ + F + S LL + ++ + + + Sbjct: 134 ERVVTVGLFRHKDTGARVVVMSTH---FDHRGKVAREESAKLLLEISRTWTA--SASRGT 188 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI------ 255 VP + GDFN + D ++ Sbjct: 189 QVPAFLGGDFNSTPSDGAYKVLAAPDSGMTDISQLVQQDDRYGNQDITYTSFGEPEETPK 248 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID+ + ++ + L +F + DD+ LSDH + D + Sbjct: 249 RIDFLFVRES--QQLTSRNFGILPNRFDDM----VYLSDHRAVVADME 290 >gi|168066199|ref|XP_001785029.1| predicted protein [Physcomitrella patens subsp. patens] gi|162663378|gb|EDQ50144.1| predicted protein [Physcomitrella patens subsp. patens] Length = 561 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 44/353 (12%), Positives = 94/353 (26%), Gaps = 68/353 (19%) Query: 18 ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 S + L+S+NI + + + S T L + ADI+ LQE+ Sbjct: 201 QSSSGTFTLLSYNILSDLYANSDQYSYCPPWALAWTYRRQNLLREIVAYRADILCLQEVQ 260 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQS------ 127 S + P + S + A R+ ++++ Sbjct: 261 SDHYEEFFAPGLEKHGYTSIYKKKTGEVYTGSIYVIDGCATFFRRDRFSLVKKYEVEFNK 320 Query: 128 ---------YPLLGAKDSFSRAGNRRAVELLVEING-----KKIWVLDIHLKSFCFLDSL 173 P + A+ +++E V ++ C D+ Sbjct: 321 AAQSLSEALIPTTKKAALSRLLKDNVALIVVLEARDTGGFMGTQAVPGKRVQLLCVADTH 380 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGN------------ 220 + + Q L + + + +P ++AGDFN + Sbjct: 381 IHANQELKDVKLWQVHTLLKGLEKITASADIPMLMAGDFNSVPGSAPHCLLSTGHVDPSH 440 Query: 221 --------------------------NDDFWKTIDPNDSLIRFPKEKDSRC----NANKN 250 + F + + ++ + + D N Sbjct: 441 PDLQVDPLNILRPASKLCHSLPLVSAYESFARMNGIDPTVEKQRRRMDLTTSEPQFTNCT 500 Query: 251 LRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +DY + + E E +D + SDH + +++ Sbjct: 501 RDFLGTLDYIFYTVDSLTVESLLELLDEDTLRKDTALPSPEWSSDHIALLVEF 553 >gi|297583616|ref|YP_003699396.1| exodeoxyribonuclease III [Bacillus selenitireducens MLS10] gi|297142073|gb|ADH98830.1| exodeoxyribonuclease III [Bacillus selenitireducens MLS10] Length = 254 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 75/305 (24%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + AD+ +QE+ + Sbjct: 1 MKLISWNVNGLRACIRKGF---------------LSFFEEAGADLFAVQEIKLQEGQVDL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S V G + ++ R Sbjct: 46 -DLQGYRQYWNYAEKKGYSGTAVFTK-------------VEPLRVFRNGVGNERQQSEGR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++++++ + + + Q L+ + Sbjct: 92 I-----LTLEFASFFLVNVYTPNSQRDLARLHERLQWEDAFYAYLQELE--------NEK 138 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + + A Sbjct: 139 PVIVCGDMNVAHEEIDLRNAKSNRGNSGFTTEERAKMTRLQSEWLIDSYRYYYPDQEGAY 198 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ + S SDHCPI Sbjct: 199 TWWSYMKTVRERNIGWRIDYFLVSDKLKSAMNDVSI-----------YSDVLGSDHCPIG 247 Query: 300 IDYDF 304 + F Sbjct: 248 LTMAF 252 >gi|157127237|ref|XP_001654881.1| ap endonuclease [Aedes aegypti] gi|108872984|gb|EAT37209.1| ap endonuclease [Aedes aegypti] Length = 612 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 80/301 (26%), Gaps = 76/301 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ SWN+ L G + ++ DI+ +QE V Sbjct: 360 FKISSWNVAGLRSWVGKGG---------------LDFFEHEKPDILCIQE---TKCVDDQ 401 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ I H + +A+ K + G D A R Sbjct: 402 LPEEVRHI------KGYHPYWLCKPGGYAGVAIYSKKMPFNVT----YGLGDEEQDADGR 451 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +K +++ +++ + + + L ++ Sbjct: 452 L-----LTAEYEKFFLVCVYVPNAGRGLVTLPKRMRWDEKFHKYLKDL--------DAKK 498 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + F + + A Sbjct: 499 PVILCGDMNVAHEEIDLANPKTNKKNAGFTPEEREGMTKLLSLGFVDTFRQLYPEQSGAY 558 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 +DYF+ + ++ D++ G SDHCP++ Sbjct: 559 TFWTYMGNARAKNVGWRLDYFITSERFVGKVV-----------DNVIRSGVYGSDHCPLT 607 Query: 300 I 300 + Sbjct: 608 L 608 >gi|83593119|ref|YP_426871.1| exodeoxyribonuclease III [Rhodospirillum rubrum ATCC 11170] gi|83576033|gb|ABC22584.1| Exodeoxyribonuclease III [Rhodospirillum rubrum ATCC 11170] Length = 266 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 76/304 (25%), Gaps = 64/304 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 V + ++N+N + L + D+ LQE+ + + Sbjct: 2 VSIATFNVN----------------SVKARLPNLLDWLGTRSPDVALLQEI---KCLDEA 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKDSFSRAGN 142 FP+ + + + + +A+ + P L + Sbjct: 43 FPR-------AEIEALGYRLAVHGQKAYNGVAILSRLPLSEVTARLPGLDGAPAEDDDQA 95 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R ++ + V ++L + ++ + + Sbjct: 96 RYLEAVV----DGRFRVCCLYLPNGNPVEEDRKFGYKLAWMDRLIVRATHLMRDF---PD 148 Query: 203 VPFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNAN 248 P ++ GDFN + L D + + + + Sbjct: 149 TPVILGGDFNVCPDDLDVYDPAGWANDALCRPETRQRFRALVFLGYTDALRALNPGAPLF 208 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ +++ A L D + SDH P Sbjct: 209 TFWDYQAGAWQKDHGLRIDHLLLNPAAADRLSAAGV-------DRATRGHAKSSDHAPSW 261 Query: 300 IDYD 303 + + Sbjct: 262 VTLE 265 >gi|163839057|ref|YP_001623462.1| exodeoxyribonuclease III [Renibacterium salmoninarum ATCC 33209] gi|162952533|gb|ABY22048.1| exodeoxyribonuclease III [Renibacterium salmoninarum ATCC 33209] Length = 288 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 43/320 (13%), Positives = 86/320 (26%), Gaps = 71/320 (22%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + A VR+ S N+N + + + D DI+ LQE+ Sbjct: 7 PTSKKAADAVRIASVNVNGIRASYRKG---------------MADWLAARDVDILCLQEV 51 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + V + F W + ++ + + + + + + + Sbjct: 52 RAPDDVVEGFLAQDWHLLHAE----------AADKGRAGVLIASRKDSLEPIATRTGIGD 101 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D F+ G R GK++ V+ ++ S ++ ++ + L Sbjct: 102 DYFATTG-RWVEADYKLSGGKQLTVVSAYVHSGEVNTPKQDDKYRFLDVMLTRMPELAA- 159 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT---------------------IDPNDS 233 +I GD N L + + Sbjct: 160 ------HSDYALIVGDLNVGHTTLDIKNWKGNVKNAGFLPEERAYFDRFFSANDLKDGLG 213 Query: 234 LIRFPKEKDSRC-NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283 +E + + IDY + + D Sbjct: 214 WKDVQREVAGQVEGPYTWWSQRGQAFDNNTGWRIDYQMATPELFAAAGDV-------VVD 266 Query: 284 DIKSRGKRLSDHCPISIDYD 303 S R SDH P+ +DY+ Sbjct: 267 RAASYDTRRSDHAPLVVDYN 286 >gi|326335986|ref|ZP_08202163.1| exodeoxyribonuclease III [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691950|gb|EGD33912.1| exodeoxyribonuclease III [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 253 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 86/302 (28%), Gaps = 73/302 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ S+N+N + Q+ D++ LQE+ + + + Sbjct: 1 MKIFSYNVNGIRAAMSKGF---------------VQWLSAASPDVICLQEIKALESQIDL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 H + ++ +A+ K + +G + R Sbjct: 46 LA-------LEEAGYRYHYFHSAEKKGYSGVAILSKKEP----EHVEIGTGIDYMDKEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++ ++L S +D Q + +I K+ Sbjct: 95 I-----LRAEYGDLSIMSLYLPSGTNID--------RLDHKLQFMADFQKYINTLKKVHP 141 Query: 204 PFVIAGDFNRKINYLGNNDDF------------WKTIDP--NDSLIRFPKEKDSRCNANK 249 VI GD+N + +D K +D I + + + Sbjct: 142 NLVICGDYNICHEAIDIHDPIRNANVSGFLPVERKWLDDFLKSGFIDSFRFFNKEPHNYS 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY ++ Q +++ + + SDHCPI + Sbjct: 202 WWSYRANARANNKGWRIDYCLVAQPLESRIVRAAIL-----------PEAKHSDHCPILV 250 Query: 301 DY 302 + Sbjct: 251 EI 252 >gi|325179666|emb|CCA14064.1| carbon catabolite repressor protein putative [Albugo laibachii Nc14] Length = 607 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 44/341 (12%), Positives = 91/341 (26%), Gaps = 60/341 (17%) Query: 24 VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 R++S+N+ + ++ V LL+ + +ADI+ LQE+ + Sbjct: 256 FRVLSYNVLAELYATRQLYPYCPMWVLSWNFRKELLKNELHSYNADILCLQEVQGDHYKT 315 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL----------- 130 +P + + + + K+N +L++ +PL Sbjct: 316 FFYPMMSEWGYDGWYLKKSRESMGLEGKVDGCALFYKRNRFILKEQHPLEFNTAACDFAS 375 Query: 131 -----LGAKDSFSRAGNRRAVELLVE-----------------INGKKIWVLDIHLKSFC 168 S A +R A +L ++ + C Sbjct: 376 SVMQDFELTYPNSTASSRDASQLRLKTRLMRDNVGQIAILEAVPPNNEFSKKPHSGPMLC 435 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLGNN------ 221 + + + Q L I + +P V+ GDFN + + Sbjct: 436 VANVHIFSNPKFPDVKMWQTFTLVKKIERILSGRDLPVVLCGDFNSEPSSAVYQFLSRNH 495 Query: 222 --------DDFWKTIDPNDSLI-------RFPKEKDSRCNANKNLRNKIPIDYFVMDQN- 265 + + + N +DY + Sbjct: 496 VASDHEDLQPLASVFNSIEIAHCLALASSYASVFRSEPEYTNYTGHWTGVVDYVWYTPSN 555 Query: 266 --AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + L S + + SDH P+ +D+ F Sbjct: 556 LALFAALKMHSPETLEAYAKTPLPNCQHTSDHVPLCLDFSF 596 >gi|320533420|ref|ZP_08034105.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 171 str. F0337] gi|320134357|gb|EFW26620.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 171 str. F0337] Length = 269 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 80/309 (25%), Gaps = 69/309 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N + + + + D D + +QE+ Sbjct: 1 MRLATWNVN----------------SIRTRVDRVLAFLEREDIDALAMQEIKCRPD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ + + S+ + Sbjct: 41 ------QFPVEPFEAAGYELAIHGLNQWNGVAIASRVGLGDV-ATSFPEQPAWASKPEAK 93 Query: 144 RAVELLVE-------INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 VE + K + + +++ + L TY + L+D + Sbjct: 94 PVVEARALGATVGTASDAKPVRLWSLYVPNGRELTHSHYTYKLD------WLRVLRDDVA 147 Query: 197 QK--KESLVPFVIAGDFNRKINYLGNNDDF-----------WKTIDPNDSLIRFPKEKDS 243 +E +P + GD+N D + + + Sbjct: 148 AWLEEEPDLPLALVGDWNVAPRDEDVWDMSVFEGATHVSSPEREAFAAFAEAGMREVTRE 207 Query: 244 RCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 R + ID+ + + D + +GK SD Sbjct: 208 RVTNYTYWDYQKLRFPRNEGMRIDFVYASPALAGRVTGAAI-------DRDERKGKGASD 260 Query: 295 HCPISIDYD 303 H P+ ++ D Sbjct: 261 HVPVIVEVD 269 >gi|312069344|ref|XP_003137638.1| CCR4-NOT transcription complex subunit 6 family protein [Loa loa] gi|307767201|gb|EFO26435.1| CCR4-NOT transcription complex subunit 6 family protein [Loa loa] Length = 590 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 46/348 (13%), Positives = 90/348 (25%), Gaps = 71/348 (20%) Query: 23 KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++ +N+ + + S + + + ++ +ADI+ LQE+ + Sbjct: 216 TFTVLCYNVLCDKYATNSLYSYCPSWALNWEYRKAAILKEIRHYEADIITLQEVETEQFR 275 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--AIAVRKKNVRVLQQSYPLLGAKDSFS 138 P+ + + +K + A+ K + + L+ Sbjct: 276 CLFQPELEQIGYAGIFSPKSRAKTMGEEERKFVDGCAIFWKYDKFELEKEHLIEFTQVAI 335 Query: 139 RAGN-------------RRAVELLVEIN------------------GKKIWVLDIHLKSF 167 R A+ + +I G + V H+ Sbjct: 336 RKAPTSEKILNRVMPKDNIALCAVFKIKENVYANRQMTMAPSDNVVGNPLVVSTAHIHW- 394 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKK---ESLVPFVIAGDFNRKINY------- 217 + +L Q+ L D I+++ +P +I GD N Sbjct: 395 --DPEFCDVKLIQSMMLVQEINTLLDEISERYRITPQQIPVLICGDLNSLPESGVVEFLS 452 Query: 218 ------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------NANKNLRNKIPI 257 D +D + C N L K I Sbjct: 453 KGAISREHPDLKEFRQDPCITRFSASDDPTVYTHALRLDCAVDPNSMPFTNYTLEFKGVI 512 Query: 258 DYFVMDQNAYKF---LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 DY + L + +L N+ SDH PI + Sbjct: 513 DYIFSTPQSLARLGVLGPLNMEWVLANKIIGFPHPHVPSDHVPIMAQF 560 >gi|167031164|ref|YP_001666395.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida GB-1] gi|166857652|gb|ABY96059.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida GB-1] Length = 284 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 37/292 (12%), Positives = 83/292 (28%), Gaps = 58/292 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 ++RL+S+NI E + + + + + D D+V L Sbjct: 28 PEDGRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHNGRAGNLQKIGKLLG--DFDLVAL 85 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE + + + R+ + V + L + +PL Sbjct: 86 QEADGGSLRSGYVNQVEHLAHLGAFPYWYQQLNRNLGRFAQHSNGVLSRLKPQLLEDHPL 145 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G R A+ + + V+ +HL + Q + Sbjct: 146 PGPAG-------RGAILVRFGEGKDALIVVMMHLALG-------------AKTRALQLGY 185 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 +++ I V+ GD N L + + + + + Sbjct: 186 IRELIGGY----RHQVLMGDMNTHATDLLEHSPL-RDLGLVAPQVEAT---------FPS 231 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + +D+ ++ + ++ I SDH P++++ Sbjct: 232 WRPQRCLDHILLSPSLTLERVEVLAQPI--------------SDHLPVAVEI 269 >gi|188528295|ref|YP_001910982.1| exodeoxyribonuclease III [Helicobacter pylori Shi470] gi|188144535|gb|ACD48952.1| exodeoxyribonuclease [Helicobacter pylori Shi470] Length = 250 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N L + ++DAD+ +QE + + + Sbjct: 1 MKLVSWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQD 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + + D R Sbjct: 42 QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINIEEHDKEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + +++++++ + S + + + L+ Sbjct: 91 -----VVTCEFELFYLVNVYVPNSQQALSRLSYRMSWEVEFRKFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSHPLKTRLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|293610563|ref|ZP_06692863.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826907|gb|EFF85272.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 280 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 82/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +R+VS N+N L L ++ + DAD+V +QE ++ + Sbjct: 20 LRVVSINVNGLRSSVTKG---------------LLEWLEQSDADVVCMQESRITHEQWTE 64 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 F W ++ A+ + V + DS R Sbjct: 65 KFRPEGWHTHLFPAERAGYA----------GTAIYSRLPFVSVKDGLGFELADSQGRF-- 112 Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++ + + ++L S + + + + Q ++ Sbjct: 113 ---ISAEFDLGLSHPVHIASLYLPSGSSGE-------EAQARKDLFLGEYAKILKQWRDE 162 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 +I GD+N + + + I + + + Sbjct: 163 NKSVIICGDYNIVHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDELGYVDTFRVVRTEAE 222 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + I + + SDH P Sbjct: 223 LYSWWSNRGQARAKNVGWRIDYHACSPDWKARTINAWV-----------YKDQWFSDHAP 271 Query: 298 ISIDY 302 + IDY Sbjct: 272 VIIDY 276 >gi|237720081|ref|ZP_04550562.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|293373921|ref|ZP_06620263.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|299147955|ref|ZP_07041018.1| putative secreted protein [Bacteroides sp. 3_1_23] gi|229450633|gb|EEO56424.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|292631142|gb|EFF49778.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|298514138|gb|EFI38024.1| putative secreted protein [Bacteroides sp. 3_1_23] Length = 519 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 83/281 (29%), Gaps = 54/281 (19%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +R++++NI + + V +Y ++ D+V LQE+ + Sbjct: 49 GNLRVLTFNIRHCAGNDDVI-----------NYDRTAAVINGMEPDVVCLQEVDYMTTRS 97 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + K + ++YPL G A Sbjct: 98 NKVDQLKTLADKTGMNHYFSKSIA-YQGGEYGNGLLFKGTPISTKTYPLPG-------AE 149 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R A E V+ HL + + A+ L D Sbjct: 150 LRSAAIAEFE----NYVVISTHLAL-------------EENNRVESAKQLTDLAKTY--- 189 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 +AGDFN + N F+ + ++ + A K ID+ V Sbjct: 190 NKVVYMAGDFNEDL----MNGTFFTELKKEWEVVSSTENTFPTGQATK------RIDFVV 239 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +++ + L + + SDH P+ D+ Sbjct: 240 TLKTPPTIVVKSNVIYNLDGVNVAIT-----SDHYPLYCDF 275 Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 72/251 (28%), Gaps = 43/251 (17%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 DY + ++ADIV LQ + ++ + + +K Sbjct: 309 DYDRTGRIIAKMNADIVCLQGLDKETERSEGIDQLN-VLAQKANMHDYFAKAIDYKGGEF 367 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 + + K V Y ++ R A+ + E K V + D+ Sbjct: 368 GVGILTKEEPVSVDRYQ------MAGKSEMRAAMVVEYE----KFVVASTNF------DT 411 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 + L + P + G FN +F++ + N Sbjct: 412 DMAKRIEALQTLETKLSAYNK----------PAFLLGYFN----EGDLESEFFQMVKSNW 457 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 +L+ K + K +D+ V ++ + Q E L D Sbjct: 458 NLLSADKSTEVS-------GKKRRLDFIVSLKSHNVNVTQADVIESLSGVDVTV-----A 505 Query: 293 SDHCPISIDYD 303 S H P+ D+ Sbjct: 506 STHYPLFCDFS 516 >gi|254476066|ref|ZP_05089452.1| exodeoxyribonuclease III [Ruegeria sp. R11] gi|214030309|gb|EEB71144.1| exodeoxyribonuclease III [Ruegeria sp. R11] Length = 262 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 29/306 (9%), Positives = 67/306 (21%), Gaps = 71/306 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L +WNIN ++ + + D++ LQE S Sbjct: 2 PFTLATWNIN----------------SVRLREPIVVKLLEEEGPDVLCLQECKSPV---D 42 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 P + + + +A+ + G + Sbjct: 43 KIPMEQFAALGYRHMI------ARGQKGYNGVAILSRLPIEDVGDKDFAGLGHARH---- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V +E + + + ++ + D + + ++DW + Sbjct: 93 ---VAGRLENG---VTIHNFYVPAG--GDVPDREVNEKFGQKLDYLTDMRDW--FHADRP 142 Query: 203 VPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247 V+ GD N D + + + Sbjct: 143 EKSVLVGDLNIAPREDDVWDHKKLLKVVSHTPVEVEHFTDVMEAGGWSDVTRNDIPDGRL 202 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + ++ SDH P Sbjct: 203 YSWWSYRAKDWDAADKGRRLDHVWATSDIKSSAHSS-------RVLRDARGWEKPSDHAP 255 Query: 298 ISIDYD 303 + +D Sbjct: 256 VFATFD 261 >gi|55821526|ref|YP_139968.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus LMG 18311] gi|55737511|gb|AAV61153.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus LMG 18311] Length = 275 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 83/305 (27%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + R + +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTGDSARAQLSR------AVIDTLVTENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + S + + K +YP +GA + G Sbjct: 55 KHLQILEDYFPDYVITWRSSVEPARKGYAGTMFLYKKELTPVITYPEIGAPSTMDCEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V ++ + + L ++ Sbjct: 114 -----IITLEFDTFFVTQVYTPNAGDGLKRLLERQIWDKKYADYLAEL--------DAQK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + + + A Sbjct: 161 PVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERAGFTNLLNKGFIDTYRHLNGDVTGAY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ +I+ + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVIKSNMIDSGDRQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 VLEID 274 >gi|326804146|ref|YP_004321964.1| exodeoxyribonuclease III [Aerococcus urinae ACS-120-V-Col10a] gi|326650889|gb|AEA01072.1| exodeoxyribonuclease III [Aerococcus urinae ACS-120-V-Col10a] Length = 281 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 76/305 (24%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWNI++L+ + + R + + D D++ +QE Sbjct: 1 MKFISWNIDSLNAALTSDSNRAQLSR------QVLETIDQYDPDLIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ S + + V K +YP +GA + G Sbjct: 55 KHQEALEEWFPDYNNAWVSSVEPARKSYAGNMVLYKKSLEPIITYPKIGAPEPMDSEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ ++ + ++ + +Q L Sbjct: 114 -----IITLDFGAFYFTQVYTPNAGNGLKRLAERQVWDEKYAQYLSQLDQ--------EK 160 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GDFN + + F Sbjct: 161 PLIATGDFNVAHKEIDLAHPENNHKSAGFTDEERSGFTKLLDQGFTDTFRHIHGDVEGVY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF++ + + + + DH PI Sbjct: 221 SWWAQRVKTSKINNSGWRIDYFLVSDRIANAVEKSEMIDSGTRQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ Sbjct: 270 YLEIS 274 >gi|15215119|gb|AAH12671.1| Deoxyribonuclease 1-like 3 [Mus musculus] gi|74178913|dbj|BAE42693.1| unnamed protein product [Mus musculus] gi|74186239|dbj|BAE42910.1| unnamed protein product [Mus musculus] Length = 310 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 95/302 (31%), Gaps = 34/302 (11%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 +L+ F++ ++A +RL S+N+ + S K ++ + K D Sbjct: 12 SLLLFILALHDTLA--LRLCSFNVRSFGA---------SKKENHEAMDIIVKIIKRC--D 58 Query: 68 IVFLQEMGSYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 ++ L E+ + + + N+ + + R++ + + A ++K V Sbjct: 59 LILLMEIKDSSNNICPMLMEKLNGNSRRSTIYNYVISSRLGRNTYKEQY-AFVYKEKLVS 117 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 V + Y +D + +R + + I S Sbjct: 118 V-KTKYHYHDYQDGDTDVFSREPFVVWFHSPFTAVKDFVIVPLHTTPET--------SVK 168 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 + + D +Q K F+ GDFN +Y+ + + + +++ Sbjct: 169 EIDELVDVYTDVRSQWKTEN--FIFMGDFNAGCSYVPKKAWQNIRLRTDPKFVWLIGDQE 226 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISI 300 I + Q ++ S + + S + L SDH P+ Sbjct: 227 DTTVKKSTSCAYDRI--VLCGQEIVNSVVPRSSGVFDFQKAYDLSEEEALDVSDHFPVEF 284 Query: 301 DY 302 Sbjct: 285 KL 286 >gi|118374759|ref|XP_001020567.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila] gi|89302334|gb|EAS00322.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila SB210] Length = 253 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 35/289 (12%), Positives = 79/289 (27%), Gaps = 52/289 (17%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 ++++ ++ +NI+ ++ + + +N + D++ LQE+ + N Sbjct: 5 ASKRINIICYNIHHGADVNDNY-----------NIQKIISTIENQNPDVICLQEVDN-NY 52 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + I + I S I K + + L Sbjct: 53 SERSLNQLQPQILTQQIQGIKESYFSPTIKNSYGILTLSKQKIIDYHTQILTTGL----- 107 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT-QK 198 +R L ++ + I N Q + + + ++ Sbjct: 108 KEDRTFQYLKLQNGLQIIHF-------------HLNNSFDQQRSRYHQLLTIFEILDKKQ 154 Query: 199 KESLVPFVIAGDFNRKIN--YLGNNDDFWKTIDPNDSLIR-----FPKEKDSRCNANKNL 251 + +I GDFN + + + ++ Sbjct: 155 LDIKNNTIICGDFNEDCDGQRYCEEECVFDLLEQKKFFNAKKLYEQKSGTQDNLYTFSRK 214 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 I ID+F + + N + K SDH PI + Sbjct: 215 YKNINIDHFYVTNDI--------------NINSFKIIDSDASDHNPIFL 249 >gi|30250127|ref|NP_842197.1| exodeoxyribonuclease III:exodeoxyribonuclease III xth [Nitrosomonas europaea ATCC 19718] gi|30139234|emb|CAD86104.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth [Nitrosomonas europaea ATCC 19718] Length = 257 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 87/307 (28%), Gaps = 78/307 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++ N+N L G L + +AD++ +QE+ + Sbjct: 1 MRIITLNVNGLRSAAGKG---------------LFDWLPRQEADVICVQELKAQQGDING 45 Query: 84 F--PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + ++ +S + + P + + F Sbjct: 46 VMRAPDGYSGYFHCAEKKGYSGVGLYTRY-------SPDQIIEGTGIPEIDMEGRF---- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++ + V+ I+L S + + Q L + Sbjct: 95 --------LRVDFGNLTVISIYLPSGSSGEHRQAAKFFFMEHFLPLLQSLAE-------C 139 Query: 202 LVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD+N +L + T+ L+ ++ + + Sbjct: 140 GREVLLCGDWNIAHKAIDLKNWRSNQKNSGFLPEERAWLSTVFDELKLVDVFRKINPEPD 199 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + S + +R SDH P Sbjct: 200 QYTWWSNRGQAWAKNVGWRIDYQIATPGLAAMATGVSI-----------YKAERFSDHAP 248 Query: 298 ISIDYDF 304 ++IDYDF Sbjct: 249 LTIDYDF 255 >gi|312881217|ref|ZP_07741015.1| sphingomyelinase/beta-hemolysin [Vibrio caribbenthicus ATCC BAA-2122] gi|309371109|gb|EFP98563.1| sphingomyelinase/beta-hemolysin [Vibrio caribbenthicus ATCC BAA-2122] Length = 1221 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 86/311 (27%), Gaps = 39/311 (12%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++R+++ N+ +R L D+V L E+ + K Sbjct: 728 QLRVMTANV--FLINSTTVGGNAKDERVEEYLKLKNDLFGFT--DVVALTEVFNQKHADK 783 Query: 83 VFPKNTWCIFY-----STERLINHSKRDSNNDIHTA-IAVRKKNVRVLQQSYPLLGAKDS 136 + + N I + + V + + + + Sbjct: 784 FASGLGLNYHTPILGTEGDWNLTEDNHSILNGIKSGGVMVLSRYPILSKSQHIFSSFCAE 843 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 A + + + ++ + K V+ H ++ D + S + Q + D+I Sbjct: 844 DGLAA-KGFIHVRIKKDWKIYNVIATHTQA----DPSVFSCSNANQTRLAQLAEINDYID 898 Query: 197 QKK-ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 +K + I GD N ++ + + R + + Sbjct: 899 RKITDKSEYVYILGDMNIDKYDSSTYAKMLTSLHAPEPVYRGMRYSWDYEKNSLAFAYNY 958 Query: 256 P-----------IDYFVMDQNAYKFLIQESF-----------SEILYNEDDIKSRGKRLS 293 +D+ + D K + + + + LS Sbjct: 959 RSSYVQNHAPQLLDHVLYDNRYAKPRYWNNVILDPVAKQRVEVTVNIMGNKDRYHYPDLS 1018 Query: 294 DHCPISIDYDF 304 DH P SI +++ Sbjct: 1019 DHFP-SIGFEY 1028 >gi|327540346|gb|EGF26932.1| exodeoxyribonuclease III [Rhodopirellula baltica WH47] Length = 256 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 26/305 (8%), Positives = 75/305 (24%), Gaps = 74/305 (24%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + ++L+SWN+N + R++ ++ D++ LQE + Sbjct: 3 ETLKLISWNVNGIRASMDKGF---------------REFVESEQPDVLCLQETKAEPEQV 47 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + ++ ++ + + + D+ R Sbjct: 48 DLSWADELGYHQVWNTATKRG--------YSGVSTWSRVEPLKVTKGLSIEEHDNEGR-- 97 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 ++ +++++ + + + + L Sbjct: 98 -------VLTTTFDDFHLVNVYTPNSQRGLARLDYRMQWDEAFLDYVKKLNRR------- 143 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNA 247 P + GD N + + + I ++ Sbjct: 144 -KPVLFCGDVNCAHKEIDLANPKANRKNAGFSDQERAGLDAVTEAGFIDSFRQFHDGPGH 202 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +DYF + + + + + SDHCP+ Sbjct: 203 YSWWTYRSDARARNIGWRLDYFWVAKKFWDRVADARIRCEI-----------HGSDHCPV 251 Query: 299 SIDYD 303 + Sbjct: 252 ELTLT 256 >gi|296271351|ref|YP_003653983.1| endonuclease/exonuclease/phosphatase [Thermobispora bispora DSM 43833] gi|296094138|gb|ADG90090.1| Endonuclease/exonuclease/phosphatase [Thermobispora bispora DSM 43833] Length = 378 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 32/290 (11%), Positives = 79/290 (27%), Gaps = 22/290 (7%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 +++ ++++N+ ++G + R + K ++ EM Sbjct: 101 PAMERIDVLTYNVCAAGNRDGTCVDTLKPARRKVWAKTVAGLIKRRGIEMASFTEMCYAQ 160 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + + + + L + Sbjct: 161 VSLLRRELPGYRFVWYGIDRPGGRRGPDRCRRLWGGLAGRAVPPDGKSFGMALAIRGRTI 220 Query: 139 RAGNRRAVELLV--EINGKKIW---VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 RR + + + +I +L T+ + Q A+ + + Sbjct: 221 GPPLRRRLRADLPPDRPDARIHPRGLLCARGVLGRRRAVGCVTHISATESPRQVAELVAE 280 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL-IRFPKEKDSRCNANKNLR 252 + + P ++ GDFNRK + + + + + + R R Sbjct: 281 Y-----AAGDPVILTGDFNRKPGDRELSCLYGMGLGEGEYTEVDAAPDGVPRRGGAPTTR 335 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IDY ++ + + I + LSDH P++ Sbjct: 336 GGRKIDYIFATED---DFLPDGAEVISVKPE--------LSDHRPLTGTL 374 >gi|300773665|ref|ZP_07083534.1| endonuclease/exonuclease/phosphatase family protein [Sphingobacterium spiritivorum ATCC 33861] gi|300759836|gb|EFK56663.1| endonuclease/exonuclease/phosphatase family protein [Sphingobacterium spiritivorum ATCC 33861] Length = 348 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 38/349 (10%), Positives = 82/349 (23%), Gaps = 64/349 (18%) Query: 1 MIRKYVLALVFFLVPC-----TASVAQKVRL---VSWNINTLSEQEGVSLWKN------- 45 M + Y +L + + + +K ++ +N+ L + E +L + Sbjct: 2 MKKTYFRSLCILFIFVVQTHISVAQQKKYQVYAAAFYNLENLFDTEKDTLINDEEFTAEG 61 Query: 46 ----SVKRTTSDYTLLRQYAKNLD-------ADIVFLQEMGSYNAVAKVFPKNTWCIFYS 94 + ++ + + L V L E+ + + + S Sbjct: 62 GNRWTAEKYRRKQLNMAKVISRLGKKYCPAGPAFVGLCELENRKVLEDL---TQQPSLVS 118 Query: 95 TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 I H + A+ +V D R + + E+ G Sbjct: 119 LGYGIVHYDSPDRRGVDVALLYNPSLFKVKDSKV-FAYKVDHLPEYRTRDILLVTGELAG 177 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFN 212 +++ VL H S S L A ++ + VI GD N Sbjct: 178 EEMHVLVNHWPSRYGG--------KSSELREHAASIVRSVVDSLYAQDSLAKVVIMGDLN 229 Query: 213 RKINYLGNNDDF-----WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 + + + + + D ++ + Sbjct: 230 DDPVDKSVRIVLNAKKTQQEVAKGGLFNTMWQHYERGVGSLGYQGKWNLFDQIIISEPLL 289 Query: 268 KFLIQ-------------------ESFSEILYNEDDIKSRGKRLSDHCP 297 + + SDH P Sbjct: 290 GEDRSTLKFWKSEIYNPEFLITQEGRYKGYPFRTFSGNVFQNGYSDHFP 338 >gi|125624386|ref|YP_001032869.1| endonuclease/exonuclease/phosphatase family protein [Lactococcus lactis subsp. cremoris MG1363] gi|124493194|emb|CAL98159.1| endonuclease/exonuclease/phosphatase family protein [Lactococcus lactis subsp. cremoris MG1363] gi|300071173|gb|ADJ60573.1| endonuclease/exonuclease/phosphatase family protein [Lactococcus lactis subsp. cremoris NZ9000] Length = 352 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 43/316 (13%), Positives = 85/316 (26%), Gaps = 55/316 (17%) Query: 21 AQKVRLVSWNI--------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + +++++NI G + S S + K + D +Q Sbjct: 56 GKTYKMMTFNIGYGSYPPSFNFFMDGGDDVRAYSKSAVKSAIQEDIRLIKKENPDFGNIQ 115 Query: 73 EMGSYNAVAKVFPKNT--------WCIFYSTERLINHSKRDSNNDI---HTAIAVRKKNV 121 E+ ++ + + + + I + I K Sbjct: 116 EIDWQGDRSQQVNEPQLVRAGLPDYSSVLTQNYDSAYLFYPVTKPIGKAKSGIMTYSKYE 175 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELL---VEINGKKIWVLDIHLKSFCFLDSLENTYS 178 Y L + RA + ++ + KK + + HL +F Sbjct: 176 IENSTRYKLPIETNFNKFFDLDRAFSVSLLPIKNSDKKFVIFNTHLSAFITDQ------- 228 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----------KTI 228 + QQ L D + + + D+N + + + W K + Sbjct: 229 ---KIQKQQLLTLFDAMKKYVNKGDYVICGADYNHALAGKAHPELTWMKEFPTENLTKGM 285 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNK-IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 KN +N ID F++ N IQ Sbjct: 286 RVVAPTNAPTVRSLDFAYHQKNPKNTFGIIDGFIVSNNIKDLKIQ------------TID 333 Query: 288 RGKRLSDHCPISIDYD 303 + SDH P+ +D+ Sbjct: 334 NQFKSSDHQPVLMDFS 349 >gi|312219360|emb|CBX99304.1| similar to endonuclease/exonuclease/phosphatase family protein [Leptosphaeria maculans] Length = 614 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 44/335 (13%), Positives = 90/335 (26%), Gaps = 64/335 (19%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 ++ + ++N+ L+ + + Y K+ DI+F+QE+ Sbjct: 293 SSGKCNGITFGAYNVENLAPNSTHHPFLA---------EHIVNYMKS--PDIIFVQEVQD 341 Query: 77 YNA-----------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 N A F + + +I TA + Sbjct: 342 DNGPTNDAVVSANLTLSTLTAAIAAAGGPNYAFTDIAPVDDRDGGQPGGNIRTAYLYKPS 401 Query: 120 NVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK----- 156 +R+ + P + + +R+ + E+ G + Sbjct: 402 LIRLYKPNPGGALDANQVLDGPTLRFNPGSIDPTNEAWTASRKPLAAQWEVIGNQQGNQP 461 Query: 157 --IWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK--KESLVPFVIA 208 + +++H S SL P Q+Q +++ + K+ + A Sbjct: 462 DVFFTVNVHFGSKGGSSSLHGDARPPVNGGVDDRLAQSQITANFVKEILTKDKNAHIITA 521 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 GDFN I L K + N +D+ + K Sbjct: 522 GDFNEFAFVEPLEQYV--NISGLQDLDAVAKLPELERYTYLFDMNAQQLDHIFVSDAVAK 579 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + + SDH P D Sbjct: 580 ---GQDAQYEHIHVNTWPEDAAQASDHDPSVARLD 611 >gi|197104133|ref|YP_002129510.1| hypothetical protein PHZ_c0667 [Phenylobacterium zucineum HLK1] gi|196477553|gb|ACG77081.1| hypothetical protein PHZ_c0667 [Phenylobacterium zucineum HLK1] Length = 333 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 34/297 (11%), Positives = 81/297 (27%), Gaps = 29/297 (9%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P +++ ++++N+ L LR+ + D+V +QE Sbjct: 23 PSQGPREREISVLTYNVRGLPWPVARGRGAALRAIGEE-LAALRRAGRE--PDLVLIQEG 79 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHS------------KRDSNNDIHTAIAVRKKNVR 122 V + + + + + + V Sbjct: 80 F-RGEVEDLVRASGYAHWARGPGRGDRRAGGLPALPGLLRGEGWGTLAGGGLHVLSDLPI 138 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 ++ A + + +G ++ V++ HL + + + + Sbjct: 139 RDVRAAAYSACAGLDCLAAKGVMLVRVRLDDGTEVDVINTHLNARRASRAPKPRTLQA-- 196 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 +Q L +I P V+ GDFN + + + P + F Sbjct: 197 -HHRQTDELLAFIADHAAPDRPLVVGGDFNVR--NAPDRYKYRAEARPYVVVAEFCHRHA 253 Query: 243 SRC-NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHC 296 ++C + + + Q+ F + + G+ SDH Sbjct: 254 AQCASPHAAQNQPW-----LKSQDLQAFASPAGIDLRPVGVETLFDGGETPSLSDHA 305 >gi|22213026|gb|AAH25571.1| Endonuclease/exonuclease/phosphatase family domain containing 1 [Mus musculus] Length = 569 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 36/296 (12%), Positives = 81/296 (27%), Gaps = 35/296 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 RL +WN+ S V N R TLL K ++ +QE+ A+ K Sbjct: 261 FRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDKEALEKF 311 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDI------------HTAIAVRKK-NVRVLQQSYPL 130 + I + + + ++ NV + Sbjct: 312 CTELNQPILPNIRKWKGSRGCWRSIVAEKPSNQLQKGPCYSGFLWDTAANVELRDIPGRE 371 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + ++A ++ + ++++ L + + ++ + S Sbjct: 372 SSPSNGHAKAVGPSPFLTRFKVGSNDLTLVNLQLTALALPGAENSSKNHSDGHR---LLN 428 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + + + VI GDF + + + + P + + Sbjct: 429 FALTLQETLKGEKDVVILGDFGQGPDSNDYD-----ILRREKFHHLVPAHTFTNISTRNP 483 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302 +K D + ++ K I S+HCP+ + Sbjct: 484 QGSKSV-DNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEL 538 >gi|325296913|ref|NP_001003774.2| deoxyribonuclease I-like 3 [Danio rerio] Length = 270 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 35/287 (12%), Positives = 81/287 (28%), Gaps = 35/287 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK- 82 +++ S+N+ + S + L + DI+ + E+ A Sbjct: 1 MKVASFNVQKFGK---------SKLSDPAVLQTLIKIVSRY--DIIVILEVVDSKGRAMD 49 Query: 83 --VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + N + ++ N R+ V + SY + A Sbjct: 50 NFLKELNKFDKKAHYTMELSTRLGRGNYKEQFMFLYREDVVEL-VGSYQYKDDQPGDEDA 108 Query: 141 GNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R L + + + ++ +H K + ++ Y + + Sbjct: 109 FAREPYILRFKCPNAVLEDLVLMPVHTKPEDSVKEIDELYDVFQDVRKKW---------- 158 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 +I GDFN +Y+ + I + + + + N I Sbjct: 159 ---KTDNIMILGDFNADGSYVSDKKMKQIRIRSDPEFHWLISDDEDTTASTHNDNTYDRI 215 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDY 302 V + ++ S + ++SDH P+ ++ Sbjct: 216 --VVYGDDMMLAVVPGSAKPFNFQTAFSLTEEDALKVSDHYPVEVEL 260 >gi|323344994|ref|ZP_08085218.1| endonuclease/exonuclease/phosphatase family protein [Prevotella oralis ATCC 33269] gi|323094264|gb|EFZ36841.1| endonuclease/exonuclease/phosphatase family protein [Prevotella oralis ATCC 33269] Length = 348 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 39/352 (11%), Positives = 92/352 (26%), Gaps = 63/352 (17%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRL---VSWNINTLSEQEGVSLWKN-----------S 46 M ++ ++ + L+ + S +K + +N L + + + Sbjct: 1 MRKQLIIFVALLLITFSVSAQKKFSVYAVGFYNQENLFDTCHDAGKNDYEFLPSGSYHWD 60 Query: 47 VKRTTSDYTLLRQYAKNLDAD--------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + + + + ++ D I+ L E+ + + + + + Sbjct: 61 GLKYSHKLHNMARALADMATDKLPNIGCAIIGLSEVENAKVLDDLTAQPELK---ARGYK 117 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 H + I A+ V P + + S +R + + + G+ + Sbjct: 118 YVHVEGPDRRGIDCALLYNPSLFAVRNVKLVPYVQRLEKDSAYKSRGFLTVSGTMAGEHV 177 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 + H S S + +Q + +KD + K + + GD N Sbjct: 178 AAIVCHWPSRFSG-------SFYREIAGEQVKAVKDSL-LKADPACKVFVMGDMNDDPVD 229 Query: 218 LGNNDDFWKTID------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 ++ + + + D VM N Sbjct: 230 RSMHEKLSAKAEINQVGVGDMYNPWYNVLVKKGTGTLMYNGAWNLFDQIVMTPNLLNKDG 289 Query: 272 QESFSEILY-----------------------NEDDIKSRGKRLSDHCPISI 300 + FS + Y SDH P+ + Sbjct: 290 SKDFSTLKYWSCQIQRMPYLFQTEGKYKGSPKRTTAGGVWQDGYSDHLPVVV 341 >gi|39951489|ref|XP_363461.1| hypothetical protein MGG_01387 [Magnaporthe oryzae 70-15] gi|145020783|gb|EDK04912.1| hypothetical protein MGG_01387 [Magnaporthe oryzae 70-15] Length = 443 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 27/291 (9%), Positives = 85/291 (29%), Gaps = 30/291 (10%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + + +++ N+ L + + + + D+V LQE +++A Sbjct: 27 SGSLNILTLNVAGLPPILNGNDVPGDKATNSRN---IGGKLSQYGYDLVHLQEDFNFHA- 82 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + + + + + + Sbjct: 83 --------YIYETNKHPFRTATSGGVPFGSGLNSVSNYDWIDFERVKWNVCENASGADCL 134 Query: 141 GNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 + + + + G + ++H + + + + D I ++ Sbjct: 135 TPKGFTFMRLRVAEGVYVDCYNLHADAGSL--------EADMKARNANLRQVSDAIKER- 185 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRN 253 ++ GD N + + + ++ + ++S C+ + Sbjct: 186 SEGNAVLVFGDTNSRYTRIPDGITVFRLQNGMTDPWVELIRGGVEPTQESLCSNPSTTNS 245 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +D + L + + + ++ G LSDH PI++++D+ Sbjct: 246 CETVDKVFYRSSPTVSLKAKEW--SYASTKFLQDNGDLLSDHNPIAVNFDW 294 >gi|154507793|ref|ZP_02043435.1| hypothetical protein ACTODO_00275 [Actinomyces odontolyticus ATCC 17982] gi|153797427|gb|EDN79847.1| hypothetical protein ACTODO_00275 [Actinomyces odontolyticus ATCC 17982] Length = 801 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 47/350 (13%), Positives = 89/350 (25%), Gaps = 73/350 (20%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVS--LWKNSVKRTTS-------------------- 52 P +V R+ ++N+ GV RT + Sbjct: 363 PGVPTVGGDTRVATFNVLNYFSDLGVDESGCSGYPDRTGAFVTAKKCKVRGAFSREAFAN 422 Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNA----------VAKVFPKNTWCIFYSTERLINHS 102 + L AD+V L+E+ + A +A++ T + Sbjct: 423 QEAKIVAAINALGADVVALEEIENPVAVGVGTDRDASLARLVEALNKDAGAGTWAYVPSP 482 Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV------EINGKK 156 + + +A K + P L D R+ + Sbjct: 483 QAVPEAEDVIRVAFIYK-PATVAPVGPSLIHDDPAFTGLARQPLAQEFARVAGERSAPAS 541 Query: 157 IWVLDIHLKSFCFLDSLENTYS--------PSCSLLSQQAQWLKDWITQKKESLVPFVIA 208 V+ H KS + + + ++ QA L + + + P ++ Sbjct: 542 FVVVANHFKSKGSVPEGAPAGNVDSGDGQGNANAIRVAQAGALASFAARFADK--PTLLV 599 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 GDFN K ++ + + + + +D+ + A Sbjct: 600 GDFNSYSQEDPI-----KALEAAG----WERVSGAGEASYVYAGRSGSLDHVFANAAAKP 650 Query: 269 FLIQESFSEILYNEDDIKSRG---------------KRLSDHCPISIDYD 303 L + I E R SDH P I Sbjct: 651 LLAGVTSWAINAQESIAFEYSRAGMNAHLAVEADNPYRSSDHNPEIIGLT 700 >gi|283769444|ref|ZP_06342342.1| exodeoxyribonuclease III [Bulleidia extructa W1219] gi|283103969|gb|EFC05354.1| exodeoxyribonuclease III [Bulleidia extructa W1219] Length = 251 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 83/309 (26%), Gaps = 86/309 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 ++ VSWN+N L ++ + +DAD+ LQE + + Sbjct: 1 MKFVSWNVNGLRAVMKKGFK---------------EFFERVDADVFALQETKMQADQITS 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + ++ + + V K + Q Sbjct: 46 EMEFEGYYRYMNSAERKGY----------SGTMVYCKEEPISVQYDIEGDTSMEG----- 90 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL---LSQQAQWLKDWITQKK 199 V+ + ++ F+ + + + L+D + + Sbjct: 91 ---------------RVITLEYPNYYFVTAYVPNSKEGLARLGFRMEWEDRLRDHLNR-L 134 Query: 200 ESLVPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + + P + GD N + + + + F Sbjct: 135 KEVKPVIYTGDLNVAHEEIDLKNPQSNHKNPGFSDEERQKMTELLADGYIDSFRYLYPKE 194 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + IDYF++ +N + + + + + SDH Sbjct: 195 VK-YSWWSYRAAARERNVGWRIDYFIVSENLKEKVKNALIDDEV-----------KGSDH 242 Query: 296 CPISIDYDF 304 CPI ++ DF Sbjct: 243 CPIELEMDF 251 >gi|291612503|ref|YP_003522660.1| exodeoxyribonuclease III Xth [Sideroxydans lithotrophicus ES-1] gi|291582615|gb|ADE10273.1| exodeoxyribonuclease III Xth [Sideroxydans lithotrophicus ES-1] Length = 288 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 38/331 (11%), Positives = 89/331 (26%), Gaps = 97/331 (29%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VA 81 +R+++ N+N + L ++ DADI+ +QE+ + A A Sbjct: 1 MRIITLNLNGIRSAYNKG---------------LLEWFSRQDADILCVQELKAQAADMTA 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + ++ +S + RK + ++ P A+ + Sbjct: 46 DMLSPLGYHGYFHYAEKKGYSGVGIYSK-------RKPDSVIVGLDIPEFDAEGRY---- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD-------- 193 +E + V+ ++L S + + + + + Sbjct: 95 --------IEAQFGNLSVVSLYLPSGSSGEERQAVKFKFMEAFMPHLRQMMENSKVPVVG 146 Query: 194 ------------------WITQKKESLVPFVIAGDFNRKINYLGNNDD------------ 223 + Q + S ++ GD+N + Sbjct: 147 ESRLLPQTAGSTSNVSQPHMVQLQRSGRDVIVCGDWNIAHTEKDLRNWRGNKKNSGFLPE 206 Query: 224 ---FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLI 271 + + + ++ A N+ IDY + + Sbjct: 207 ERAWLTELLGEVGFVDVFRKLHPELEAYTWWSNRGQAWAKDVGWRIDYQIATPGMAAKAV 266 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +R SDH P+ +DY Sbjct: 267 STGI-----------YKEQRFSDHAPLMVDY 286 >gi|319409386|emb|CBI83030.1| exodeoxyribonuclease III [Bartonella schoenbuchensis R1] Length = 271 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 33/306 (10%), Positives = 77/306 (25%), Gaps = 66/306 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 R+ +WN+N + QY DI+ LQE + Sbjct: 3 FRIATWNVN----------------SIRLRLAQVLQYLDLFAPDILCLQETKCP---DHL 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + S + +AV + + + K F + Sbjct: 44 FPREPFQAA------GYEHIALSGQKSYHGVAVVSRLPLLDVE-------KRFFCQKEEC 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--- 200 R + ++V+ G+ I + + ++ + D + + + + + + + Sbjct: 91 RYLSVVVQPCGRAIRIHNFYVPAG--GDEPDVSVNEKFRHKLDFLEEMSSIRADQGDGLS 148 Query: 201 ------------SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + N + + + + Sbjct: 149 SLLLGDLNIAPLEDDVWSHKKLLNVVSHTPVETERLQALCREGGWIDLMRIKFPVPAKLY 208 Query: 249 KNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +D+ + F+ S + SDH P+ Sbjct: 209 TWWSYRARDFALSDRGRRLDHIWSSPDLAPFMDDLSI-------FRAARGEPQPSDHVPV 261 Query: 299 SIDYDF 304 +DF Sbjct: 262 QTVFDF 267 >gi|313887266|ref|ZP_07820957.1| endonuclease/exonuclease/phosphatase family protein [Porphyromonas asaccharolytica PR426713P-I] gi|312923185|gb|EFR34003.1| endonuclease/exonuclease/phosphatase family protein [Porphyromonas asaccharolytica PR426713P-I] Length = 345 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 38/341 (11%), Positives = 85/341 (24%), Gaps = 55/341 (16%) Query: 6 VLALVF-FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN----------SVKRTTSDY 54 +L+L F + ++ Q+V + +N+ L + +++R Sbjct: 4 LLSLSFGIIYAQQSTTPQRVTVAFYNLENLFDTIDQENNDEEFLPEGANRWTLERYQHKL 63 Query: 55 TLLRQYAKNLDAD---IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 + + D I+ + E+ + + + + + I H I Sbjct: 64 RNMSHVISLIGGDGPAIIGVAEIENRGVLEDLIAEES---LRDKHYDIVHYDSPDRRGID 120 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 AI + + +V + + R V ++G+ + VL H S + Sbjct: 121 CAILYQPEVYKVFASGARAVEIPNEPWIK-TRDVVYASGLLDGEIVHVLVGHWPSRSGGE 179 Query: 172 SLE-NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----- 225 ++ + + + A L ++ GDFN D Sbjct: 180 AVSLHRRMAAAKTMRSVADSL-----YTLFPGSKVIMMGDFNDDPISPSVRDGLGVQNHP 234 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF---------------- 269 P D + + D ++ Sbjct: 235 DQTKPADYYTPMLQLYNKGMGTLAYRDVWNLFDIIAVNGELIGSNPTTWQLYRDPETTDM 294 Query: 270 ----------LIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + SDH P+ + Sbjct: 295 AFIFKQPFMIQQSGQYKGYTLRTFVGGQWQGGYSDHFPVYV 335 >gi|218671527|ref|ZP_03521197.1| putative metal-dependent hydrolase protein [Rhizobium etli GR56] Length = 170 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 24/197 (12%), Positives = 55/197 (27%), Gaps = 37/197 (18%) Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 A+ ++ PL R A+ + + + +K+ V++ HL Sbjct: 8 EQYGDAIITALPTGAVKAGPLPSIG------EQRGALSVEILVGDRKLLVINTHLGLRG- 60 Query: 170 LDSLENTYSPSCSLLSQQAQWLKD--WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 +Q L + W+ +P ++ GDFN + ++ Sbjct: 61 ------------RERIRQMTTLLNAGWLRGAANEPLPCILCGDFNAIPSSAT-YRLAARS 107 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + K + + +D+ + + + Sbjct: 108 LKD---AQLAGKAAAKATFPSLYP--LMRLDHIFVTDDL----------VVKKATVLQNR 152 Query: 288 RGKRLSDHCPISIDYDF 304 + SDH P+ + F Sbjct: 153 LTRIASDHLPLFAEIGF 169 >gi|289662605|ref|ZP_06484186.1| hypothetical protein XcampvN_05822 [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 255 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 42/295 (14%), Positives = 86/295 (29%), Gaps = 60/295 (20%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVF 70 AS ++ +R+++ NI S S + + + + DIV Sbjct: 3 ASESRTLRVLTANIQAGSSTRRYSDYVTRSWSHALPLGSKRTSLDSIAKLVGER--DIVG 60 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYP 129 LQE + + + + + +H R +A + K V Q + Sbjct: 61 LQEADPGSLRSGFTNQTHYLAERAGFDYWSHQPNRRMGGVASSANGLLSKLEPVEVQDHA 120 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 L G R G R + + V HL + Q Sbjct: 121 LPG------RIGGRGILLAKFGEGRDGLAVAVAHLSLG-------------ANSRMAQLA 161 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC--NA 247 ++ + ++ + ++ GDFN + L R + + C + Sbjct: 162 FIAELLSDHPNA----MLMGDFNCMADRPEMQS-----------LYRHTRLQPPSCEVHT 206 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + R ID+ ++ + + ++ SDH + +D Sbjct: 207 FPSWRPDRAIDHILVSDSL--------------VIEHTEAIPAAFSDHLAVGMDI 247 >gi|120610799|ref|YP_970477.1| exodeoxyribonuclease III [Acidovorax citrulli AAC00-1] gi|120589263|gb|ABM32703.1| Exodeoxyribonuclease III [Acidovorax citrulli AAC00-1] Length = 262 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 36/300 (12%), Positives = 75/300 (25%), Gaps = 70/300 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N + L Q+ + D+ LQE+ + Sbjct: 1 MKIATFNVN----------------SIRARLPALLQWLEESRPDVACLQELKCTDDA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + +A+ + ++ L G + Sbjct: 42 -------FPAGEIRAAGYGALWHGQKAWNGVAILARGANPIEVQRGLPGDEADSQSRYLE 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 AV+ ++ V ++L + + Y + L ++ Sbjct: 95 AAVDGVL--------VACLYLPNGNPAPGPKFDYKLA------WLDRLARRAGVLRDRPE 140 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGDFN D ++ + + Sbjct: 141 PVVLAGDFNIIPTERDVYKPGAWVDDALFRSEVRDAFRALVDSGWTDALRAVHPDETVYT 200 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ +++ A L D R SDH P Sbjct: 201 FWDYLRQRFQRNAGLRIDHLLLNPAAAHRLQDAGV-------DREVRGRPRPSDHAPAWA 253 >gi|74217725|dbj|BAE33589.1| unnamed protein product [Mus musculus] Length = 310 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 94/307 (30%), Gaps = 44/307 (14%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 +L+ F++ ++A +RL S+N+ + S K ++ + K D Sbjct: 12 SLLLFILALHDTLA--LRLCSFNVRSFGA---------SKKENHEAMDIIVKIIKRC--D 58 Query: 68 IVFLQEMGSYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 ++ L E+ + + + N+ + + R++ + + A ++K V Sbjct: 59 LILLMEIKDSSNNICPMLMEKLNGNSRRSTIYNYVISSRLGRNTYKEQY-AFVYKEKLVS 117 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 V + Y +D + +R + + I S Sbjct: 118 V-KTKYHYHDYQDGDTDVFSREPFVVWFHSPFTAVKDFVIVPLHTTPETS---------- 166 Query: 183 LLSQQAQWLKDWITQKKE-----SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + + + + + F+ GDFN +Y+ + + + Sbjct: 167 -----VKEIDELVDVYTDVRSQWKTENFIFMGDFNAGCSYVPKKAWQNIRLRTDPKFVWL 221 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDH 295 +++ I + Q ++ S + + S + L SDH Sbjct: 222 IGDQEDTTVKKSTSCAYDRI--VLCGQEIVNSVVPRSSGVFDFQKAYDLSEEEALDVSDH 279 Query: 296 CPISIDY 302 P+ Sbjct: 280 FPVEFKL 286 >gi|50086482|ref|YP_047992.1| catabolite repression control protein [Acinetobacter sp. ADP1] gi|49532458|emb|CAG70170.1| catabolite repression control protein [Acinetobacter sp. ADP1] Length = 285 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 82/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +R+VS N+N L L ++ + +AD++ +QE ++ Sbjct: 26 LRVVSINVNGLRSSVTKG---------------LLEWLEKSEADVICMQESRITHAQWTD 70 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 F W ++ A+ + Q DS R Sbjct: 71 KFKPEGWYTHLFPAERAGYA----------GTAIYSRIPFKSVQDGLGFELADSQGRF-- 118 Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++ + ++ ++L S D + + + + Q ++ Sbjct: 119 ---IAAEFDLGLNQPAYICSLYLPSGSSGD-------EAQARKDVFLEKYAQILKQWRDE 168 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD+N + + + I + +E Sbjct: 169 NKSIIVCGDYNIVHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDELGYVDTFREVRPEAE 228 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + + R + SDH P Sbjct: 229 LYSWWSNRGQARAKNVGWRIDYHACSPDWKTRTVNAWV-----------YRDEWYSDHAP 277 Query: 298 ISIDY 302 + IDY Sbjct: 278 VIIDY 282 >gi|34580716|ref|ZP_00142196.1| exodeoxyribonuclease III [Rickettsia sibirica 246] gi|28262101|gb|EAA25605.1| exodeoxyribonuclease III [Rickettsia sibirica 246] Length = 271 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 80/306 (26%), Gaps = 72/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V+WNIN+L LLR+ A DI+ LQE +++ Sbjct: 1 MKIVTWNINSL----------------RLRIDLLRKLAYEHQPDIILLQETKVADSL--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + S + +A+ K S L + R Sbjct: 42 ------FPLEVIKNIGYEHVIYSGQKSYNGVAIISKFPLNDVFSLELYNSDK-------R 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ +I +V D + + + + +++W+T + Sbjct: 89 HIAAIVNDIEIHNFYV-------PAGGDIPDIEVNTKFKHKLEYVRLMQEWLTTNRTKND 141 Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 +I GD N + + + + Sbjct: 142 KMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSLLVELQNALGFIDSSRHFVSLDEKF 201 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + N L+ + SDH P Sbjct: 202 YTWWSYRNIDWKKSNRGRRLDHIWVSDNLKGALVS-------MHLLSEARDWSSPSDHVP 254 Query: 298 ISIDYD 303 + ++ Sbjct: 255 YFVTFN 260 >gi|303241137|ref|ZP_07327646.1| exodeoxyribonuclease III Xth [Acetivibrio cellulolyticus CD2] gi|302591397|gb|EFL61136.1| exodeoxyribonuclease III Xth [Acetivibrio cellulolyticus CD2] Length = 251 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 81/304 (26%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++SWN+N + G + + DADI +QE Sbjct: 2 LKMISWNVNGIRAVMGKGF---------------TDFFQKEDADIFCIQETKVQEG-QIE 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P + +++ + + +AV K + + D R Sbjct: 46 IPFEGYYKYWNYAEKKGY----------SGVAVFTKIKPITVSYGIGIEEHDKEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +V+ ++ + + + + L+ + Sbjct: 92 -----VITLEFDEYYVVTVYTPNSQRGLTRLHYRMKWEDDFLSYLKSLERY--------K 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + N + F R Sbjct: 139 PVIVCGDLNVAHKEIDLKNPQSNKKNAGFTEEERSKFDSYVNNGFIDTFRYFYPDRIGVY 198 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ + L D + SDHCP+ Sbjct: 199 TWWSYMFNSRQNNAGWRIDYFIVSERIKDRLK-----------DALVYSEITGSDHCPVG 247 Query: 300 IDYD 303 I D Sbjct: 248 ILLD 251 >gi|224113265|ref|XP_002332611.1| predicted protein [Populus trichocarpa] gi|222832812|gb|EEE71289.1| predicted protein [Populus trichocarpa] Length = 422 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 91/306 (29%), Gaps = 47/306 (15%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 +A+V +++S+N+ E + L + + D++ LQE+ Sbjct: 145 TNSAAVLGSFKILSYNV-WFREDLEM----------HRRMKALGELIQLHSPDVICLQEV 193 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + ++ ++ + S+ S+ K + P + + Sbjct: 194 -----IPDIYDIFQRSSWWKAYQCSVSSEIASSRGYFC--MQLSKLPVKSFSTKPFMNS- 245 Query: 135 DSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 R +E+ GKK + V HL+S C QA+ + Sbjct: 246 -----IMGRELCIAELEVPGKKSLVVATSHLESPCPAPPKW--DQMFSKERVDQAKEAIN 298 Query: 194 WITQKKESLVPFVIAGDFNRKINYLG----NNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + + GD N G + ++ + + S + Sbjct: 299 LLK----KNSNVIFCGDMNWDDKLDGQFPFPDGWVDAWVELKPGDNGWTYDTKSNQMLSG 354 Query: 250 NLRNKIPIDYFVMDQ-----NAYKFLIQESFSEILYNEDDIKSRGKR-------LSDHCP 297 N + +D F+ + + +++ + Y ++ + + SDH Sbjct: 355 NRALQKRLDRFICSLCDFKISKIDMIGKDAIPGLSYMKEKKVRKEVKMLELPVLPSDHYG 414 Query: 298 ISIDYD 303 + + Sbjct: 415 LLLTIS 420 >gi|169838781|ref|ZP_02871969.1| Endonuclease/exonuclease/phosphatase [candidate division TM7 single-cell isolate TM7a] Length = 245 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 84/285 (29%), Gaps = 59/285 (20%) Query: 29 WNINTLSE---QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-------SYN 78 +NI + + + + + + ++ D+V L E+ S N Sbjct: 4 YNIRYGTGKYLNQPFKHIRGYLGHSVKHIYRIGKFINRYKPDLVGLVEVDLGSFRMYSRN 63 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + Y + + A+ KN + ++ + L Sbjct: 64 QATLLGRITRNNNVYQYKYEEDSQYMKFPMVRKQGNALLSKNPILREEFHYLDIGMKK-- 121 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 L++E+ + + V +HL +Q L D + Sbjct: 122 ---------LIIEVETEDVIVFLVHLALGG-------------KTRQKQIVQLYDLVKNC 159 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 K+ P ++AGDFN + +D ++ + K +D Sbjct: 160 KK---PVIVAGDFNVFWGEEEIE----MFLQASDLKNINTRKDP----TFPSWNPKRELD 208 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + S+ I +LSDH PI ID+D Sbjct: 209 FILCSKEIKV----NSYEVIQT----------QLSDHLPILIDFD 239 >gi|262280501|ref|ZP_06058285.1| catabolite repression control protein [Acinetobacter calcoaceticus RUH2202] gi|262258279|gb|EEY77013.1| catabolite repression control protein [Acinetobacter calcoaceticus RUH2202] Length = 280 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +R+VS N+N L L ++ + DAD+V +QE ++ + Sbjct: 20 LRVVSINVNGLRSSVTKG---------------LLEWLEQSDADVVCMQESRITHEQWTE 64 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 F W ++ A+ + V + DS R Sbjct: 65 KFRPEGWHTHLFPAERAGYA----------GTAIYSRLPFVSVKDGLGFELADSQGRF-- 112 Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++ + + ++L S + + + + Q ++ Sbjct: 113 ---ISAEFDLGLSHPVHIASLYLPSGSSGE-------EAQARKDLFLGEYAKILKQWRDE 162 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 +I GD+N + + + I + + + Sbjct: 163 NKSVIICGDYNIVHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDELGYVDTFRIVRAEAE 222 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + + + SDH P Sbjct: 223 LYSWWSNRGQARAKNVGWRIDYQACSPDWKTRTTNAWV-----------FKDQWFSDHAP 271 Query: 298 ISIDY 302 + IDY Sbjct: 272 VIIDY 276 >gi|329955530|ref|ZP_08296438.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides clarus YIT 12056] gi|328525933|gb|EGF52957.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides clarus YIT 12056] Length = 335 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 36/346 (10%), Positives = 95/346 (27%), Gaps = 61/346 (17%) Query: 1 MIRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKN-----------S 46 M + V +F V + + + +N+ L + + + S Sbjct: 1 MRKLIVFFSFWFGVTIVTAQNTERKLYSIAFYNLENLFDTIHDAGKNDHEFLPDGSYRWS 60 Query: 47 VKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99 V++ + L + +L D ++ + E+ + A+ + + + Sbjct: 61 VRKYEAKLHNLSKVLSSLSRDLVPEGPAVIGVAEVENRRALTDLVSRPAISNYKFVHYEG 120 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 I A+ + V L + + R + + + G+++ Sbjct: 121 P-----DRRGIDCALLYDPQQFTVTNSKLVLSTPFEGDTVHLTRGFLIVDGRMAGERVCF 175 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 + H S SP ++Q + L D + +++ + + GD N Sbjct: 176 IVNHWPSR-------GAKSPVRVHAAKQVRALTDSL-LREDKKLKLFVMGDMNDDPMDES 227 Query: 220 N-----------------NDDFWKTIDPNDSLIRFPKEKDSRC------NANKNLRNKIP 256 + +W+ ++ + K + + + Sbjct: 228 MQTLGARKYVSGMKASQFYNPWWEILEDKGVGTLLYRGKWNLFDQIVLSRPVVKAKKGLR 287 Query: 257 IDY--FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 D+ + + + + SDH P + Sbjct: 288 YDHSEVFIRDYLIQ--QDGKYKGAPLRTHGGRVWLNGYSDHLPTIV 331 >gi|307129015|ref|YP_003881031.1| Endonuclease/Exonuclease/phosphatase family protein [Dickeya dadantii 3937] gi|306526544|gb|ADM96474.1| Endonuclease/Exonuclease/phosphatase family protein [Dickeya dadantii 3937] Length = 380 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 32/267 (11%), Positives = 75/267 (28%), Gaps = 32/267 (11%) Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 K L+ADI+ E+ + + + ++ +I+ I A R + Sbjct: 121 VIKALNADILCAVEVENMAVLRDFNQQILADRAFAQYVMIDSPN--DPRGIDVACLTRHR 178 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYS 178 ++ + +SF +R +E+ +++ + + VL H KS + E + Sbjct: 179 ITQL---RTHIFDVSESFKPLFSRDCLEVTIDVGLPQPVHVLCNHFKSQNGRNDDERERA 235 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + + + V+ GD N + ++ D Sbjct: 236 AKRRRAQA--ERVAEIVRGYNLQQEYVVVMGDLNEDVANPWHS--LAPLFSVPDLHPAID 291 Query: 239 KEKDSRCNANKNLRNK------IPIDYFVMDQNAYKFLIQESFSEI-------------- 278 +DY + ++ + Sbjct: 292 PSLPETARYTYYFSGGKAGERLNQLDYIFISTPLHQAKVTCGIERRGIYNIDKITAKEGA 351 Query: 279 --LYNEDDIKSRGKRLSDHCPISIDYD 303 + + S SDH + ++ D Sbjct: 352 EPVTPFPTVTSWDTAASDHAAVWVELD 378 >gi|294664292|ref|ZP_06729661.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605941|gb|EFF49223.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 330 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 36/298 (12%), Positives = 75/298 (25%), Gaps = 74/298 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 ++ ++N+N ++ L ++ + DIV LQE+ S + Sbjct: 7 KIATFNVNGIAS----------------RLPHLLEWLQREQPDIVGLQELKSTQSA---- 46 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGN 142 R + +A+ R +++ P Sbjct: 47 ------FPKQAIRDAGYGVIWHGEKSWNGVALLARGTEPVEIRRGLPW----------DP 90 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R +E + V ++L + + Y + + L + Sbjct: 91 RDTQSRYLEAAIHGVVVACLYLPNGNPQPGPKFDYKLA------WFERLIRHAKTLVDLP 144 Query: 203 VPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNA 247 P + GDFN D ++T+ P Sbjct: 145 HPVALIGDFNVVPTDADIYDPKGWRKDALLQPESREAYQTLLAQGWTDSLPAIHGQTPIY 204 Query: 248 NKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ ++++ L D ++ SDH P Sbjct: 205 TFWDYFRQHFARDRGLRIDHLLLNRTLGPGLQDAGV-------DKWVRALEKASDHAP 255 >gi|293188973|ref|ZP_06607706.1| exodeoxyribonuclease III [Actinomyces odontolyticus F0309] gi|292822075|gb|EFF81001.1| exodeoxyribonuclease III [Actinomyces odontolyticus F0309] Length = 271 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 33/309 (10%), Positives = 78/309 (25%), Gaps = 67/309 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R +WN+N + + + + D++ +QE+ Sbjct: 1 MRFATWNVN----------------SIRTRVDRVIAFLERSGTDVLAMQEIKCRPD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +AV + + Q + Sbjct: 41 ------QFPTEAFEEAGYHVAIHGLNQWNGVAVASRLPILDVQDHFPTQPAFGEPPVVEA 94 Query: 144 RAVELLVEINGK---------KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 RA+ + ++ + + +++ + L Y L+ A+ + W Sbjct: 95 RALGVTIDTTNTLPSEDRQASSMTIWSLYVPNGRELTHAHYAYK--LEWLANLAEQGRGW 152 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFW-----------KTIDPNDSLIRFPKEKDS 243 + + + GD+N D + + + + Sbjct: 153 L---TDPSALIALVGDWNVAPLDEDVWDMSAFEGATHVSAPEREAFAAFAADGWVEVTRE 209 Query: 244 RCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 R + ID+ + D + +GK SD Sbjct: 210 RVTNYTYWDYQKLRFPKNEGMRIDFAYCSPALAARVSGAQI-------DRDERKGKGASD 262 Query: 295 HCPISIDYD 303 H P+ +D D Sbjct: 263 HVPVIVDVD 271 >gi|256545331|ref|ZP_05472695.1| exodeoxyribonuclease III [Anaerococcus vaginalis ATCC 51170] gi|256399012|gb|EEU12625.1| exodeoxyribonuclease III [Anaerococcus vaginalis ATCC 51170] Length = 275 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 87/305 (28%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWNI++L+ + + R + + + DAD++ LQE Sbjct: 1 MKFISWNIDSLNAALTSDSNRAVMSRD------VLKTIISEDADVICLQETKLPRTGPSK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + S ++ + K + ++P+L A D+ + Sbjct: 55 KHQKILEEYFPSYDYAWVSSQEPARKSYAGCLTLYKKNLQTKITFPVLDAPDTMDQE--- 111 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +K ++ ++ + + + + L + Sbjct: 112 ---ARIITLEFEKFYLTQVYTPNAGNGLNRLGLRQIWDEKFANYLENL--------DKNK 160 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + GDFN + + + + F Sbjct: 161 AVIACGDFNVAHKEIDLKHPENNHESAGFTDEERNGFTNLLNKGFVDTFRYIHGDVEGKY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF++ + + + + + DH PI Sbjct: 221 TWWAQRVKTSKINNSGWRIDYFIVSDRIKDKIKESNMIDSGDRQ-----------DHTPI 269 Query: 299 SIDYD 303 + D Sbjct: 270 YLSID 274 >gi|6735373|emb|CAB68194.1| putative protein [Arabidopsis thaliana] Length = 597 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 43/344 (12%), Positives = 87/344 (25%), Gaps = 59/344 (17%) Query: 18 ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 ++S+NI +T + + S T L + ADIV LQE+ Sbjct: 242 PLSMGTFTVLSYNILSDTYASSDIYSYCPTWALAWTYRRQNLLREIVKYRADIVCLQEVQ 301 Query: 76 SYNAVAKVFPK---NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + + P+ + + + + + D R + V Sbjct: 302 NDHFEEFFLPELDKHGYQGLFKRKTNEVFIGNTNTIDGCATFFRRDRFSHVEFNKAAQSL 361 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY-----------SPSC 181 + + + A+ LV+ N I VL+ S + + Sbjct: 362 TEAIIPVSQKKNALNRLVKDNVALIVVLEAKFGSQAADNPGKRQLLCVANTHVNVPHELK 421 Query: 182 SLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNN------------DDFWKTI 228 + Q L + + + +P ++ GDFN + D + Sbjct: 422 DVKLWQVHTLLKGLEKIAASADIPMLVCGDFNTVPASAPHTLLAVGKVDPLHPDLMVDPL 481 Query: 229 DPNDSLIRFPKEKD-----------------------------SRCNANKNLRNKIPIDY 259 + + N +DY Sbjct: 482 GILRPHSKLTHQLPLVSAYSQFAKMGGNVITEQQRRRLDPASSEPLFTNCTRDFIGTLDY 541 Query: 260 FVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + E E +D + SDH + ++ Sbjct: 542 IFYTADTLTVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 585 >gi|26990757|ref|NP_746182.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida KT2440] gi|148547022|ref|YP_001267124.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida F1] gi|24985756|gb|AAN69646.1|AE016599_1 conserved hypothetical protein [Pseudomonas putida KT2440] gi|148511080|gb|ABQ77940.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida F1] Length = 264 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 86/296 (29%), Gaps = 50/296 (16%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 F A +++R+++ N + LR+ ++ ADIVFL Sbjct: 10 FASVSQAPAVKRLRVLTVNTHKGFTAFNRRF----------ILPELREAVRSTQADIVFL 59 Query: 72 QEM----GSYNAVAKVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQ 125 QE+ + A +P+ + F + + + + D H A+ K + Sbjct: 60 QEVLGSHDRHAARYPGWPQTSQYEFLADSMWSDFAYGRNAVYPDGHHGNALLSKYPIIEH 119 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 ++ + R + ++E+ G+ S + L Sbjct: 120 RNLDVSITG-----PERRGLLHCVLEVPGQGQVHAVCVHLSLLESHRQKQLQLLRKLL-- 172 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + P +IAGDFN ++ + + F + Sbjct: 173 -----------DALPANAPVIIAGDFNDWKSHGNRTLGLQRDLHE-----AFERHHGHLA 216 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + +D + + + LSDH P++++ Sbjct: 217 RTYPARLPLLRLDRIYLRNA-----ESHGPRILGHK------PWSHLSDHLPLAVE 261 >gi|332829539|gb|EGK02188.1| exodeoxyribonuclease III [Dysgonomonas gadei ATCC BAA-286] Length = 254 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 36/306 (11%), Positives = 86/306 (28%), Gaps = 77/306 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+N+N + L ++ + DI+ LQE+ + V Sbjct: 1 MKIISYNVNGIRAAVNKG---------------LYEWMEKESPDILCLQEIKAMEEQIDV 45 Query: 84 F--PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + ++ + + + + + K +S + D R Sbjct: 46 LTIQSLGYHYYFHSAEKKGY----------SGVGILTKKKPDFVKSGMDMPVYDREGR-- 93 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 ++ + + V+ +++ S D ++ + + +I + ++ Sbjct: 94 -------VLRADYGDMTVICVYIPSGTMGDIRQD-------VKMKFLADFTHFINELRKE 139 Query: 202 LVPFVIAGDFNRKIN----YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA---------- 247 +I GD+N P + + Sbjct: 140 RPQILICGDYNICHKPIDISHPERHTKDSGFLPEERQWFDEYIATGLIDTFRVYDESPDK 199 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY ++ + A L + SDHCPI Sbjct: 200 YSWWSYRAGARGKNLGWRIDYHIISEEARPRLNGAAIL-----------SDIDFSDHCPI 248 Query: 299 SIDYDF 304 ++ DF Sbjct: 249 VVEMDF 254 >gi|227499267|ref|ZP_03929379.1| exodeoxyribonuclease III [Anaerococcus tetradius ATCC 35098] gi|227218676|gb|EEI83907.1| exodeoxyribonuclease III [Anaerococcus tetradius ATCC 35098] Length = 273 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 85/304 (27%), Gaps = 56/304 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWNI++L+ + + R + KN DADI+ LQE Sbjct: 1 MKFISWNIDSLNAALTSDSARAKLSRD------VLDTIKNEDADIIALQETKLPATGPSK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 K F+ S RDS + K +++S+P +GA D+ G Sbjct: 55 KHKEKLFEFFPDYDYFWVSSRDSARKSYAGTMTLYKKGLKVKESFPEIGAPDTMDLEGRI 114 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +EL + + ++ + + + + L Sbjct: 115 LTLELD------DYYFVQVYTPNAGGELNRLPLREIWDLKFADYLEELDKI--------K 160 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GDFN + + F A Sbjct: 161 PVIATGDFNVAHEEIDLAHPENNHMSAGFTDEERRGFTNLLNRGFTDSFRYLNKDLEGAY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF++ + + + + DH PI Sbjct: 221 TWWAQRVKTSKINNSGWRIDYFLVSDRLIDKVKDSTMIDSGQRQ-----------DHTPI 269 Query: 299 SIDY 302 ++ Sbjct: 270 MLEI 273 >gi|229587031|ref|YP_002845532.1| Exodeoxyribonuclease III [Rickettsia africae ESF-5] gi|228022081|gb|ACP53789.1| Exodeoxyribonuclease III [Rickettsia africae ESF-5] Length = 260 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 88/303 (29%), Gaps = 69/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + LLR + + DI+ LQE+ A Sbjct: 1 MKIATWNIN----------------SIKTRLNLLRNFLSKENPDILLLQEIKCETA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ + +A+ K + +++ R Sbjct: 41 ------KFPFDALSDLPYNSYVHGQKSYNGVAIISKFP----ADEIIKDFPNNYCSDQAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E+ + + ++ ++ + F+ S + + ++++ KK Sbjct: 91 F-LEIKLSLPIGFCNIISLYAPNGSFVGSDKFVAKLAF------YDNFINYLSTKKSFDE 143 Query: 204 PFVIAGDFNRKINYLGNNDDFW---------------KTIDPNDSLIRFPKEKDSRCNAN 248 +I GDFN + +TI + + S+ Sbjct: 144 KTIIGGDFNIAPFDIDVYSPKLLTETTCFTEVEQKKLRTILNSGFEDLYRLMHPSKQE-F 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID + N +L D ++ SDH P+ Sbjct: 203 SWWDYRAGCFEQNKGMRIDMVLGCNNTIDYLENCYM-------DYNLRTQEKPSDHIPVI 255 Query: 300 IDY 302 + Sbjct: 256 ASF 258 >gi|190348984|gb|EDK41547.2| hypothetical protein PGUG_05645 [Meyerozyma guilliermondii ATCC 6260] Length = 308 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 91/313 (29%), Gaps = 31/313 (9%) Query: 3 RKYVLALVFFLVPCTASVA------------QKVRLVSWNINTLSEQEGVSLWKNSVKRT 50 K+ A + LV A+ R+ S N+ +E+ + +R Sbjct: 1 MKFSFAQILLLVSAVAAQPVQWSDLETRDTDLAFRIYSNNVREYTEK-RFPDERPWDERK 59 Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR-DSNND 109 L + +V LQE+ V + N + Sbjct: 60 YGVIEALNSRIHDF-PTLVGLQELKHNQLVDVLAGLNGQNQTEFPWAHYGVGRDDGVEKG 118 Query: 110 IHTAIAVRKKNVRVLQQSY----PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 ++AI +L +Y P AG+RR V + N + ++ Sbjct: 119 EYSAILYNTLEWDLLNGTYKWLSPTPDVPSYGWDAGSRRIVTMTTFRNKQTGTKVNYFNT 178 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 + S + + + W+ Q + P ++GDFN + + Sbjct: 179 HL---------DNKSEQSRQESTKLIVGWL-QSIPNDYPQFLSGDFNSIASDIAYETVAD 228 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 D N ++ + ++ ID+ N+ K + + Y Sbjct: 229 YMADTNVIANIHETGNETTYTGFEYGDHQSVIDFIWAPSNSNKP--KSGVEVVGYEVLSN 286 Query: 286 KSRGKRLSDHCPI 298 R SDH P+ Sbjct: 287 NYSDFRFSDHRPV 299 >gi|149916430|ref|ZP_01904949.1| prephenate dehydratase [Roseobacter sp. AzwK-3b] gi|149809700|gb|EDM69554.1| prephenate dehydratase [Roseobacter sp. AzwK-3b] Length = 305 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 91/309 (29%), Gaps = 40/309 (12%) Query: 24 VRLVSWNINTL--------SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 +R+ ++N+ +L + + + D L Q ++LDAD++ LQE+ Sbjct: 1 MRIATFNVQSLRLRGDHLSGAHDDDTPERADPSLDHRDRLLTAQVIRDLDADVLALQEVF 60 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 A+ + + I + N+ IA+ + S+ L D Sbjct: 61 DSAALDHF--HDHYLIPAGMPPYPHRICLPGNDGRGLDIALLSRMTPGDVVSHATLRPAD 118 Query: 136 SFSRAGNRRAVE--------LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 R E L VE+ G ++++ + + + +L + Sbjct: 119 LGLAVPPRLRAETPIFRRDCLRVELAGLTLFLVHFKAPTPDPDAARPVRALEAAALRALI 178 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 D + ++I GD N + + P S+ + + + Sbjct: 179 EARFDD------PARAMWLILGDLNDPWDAKDP--PATAPVLPPFSVNLMDRLPEDARWS 230 Query: 248 NK--NLRNKIPIDYFVMDQNAYKF------------LIQESFSEILYNEDDIKSRGKRLS 293 D + + + E+ + D+ S Sbjct: 231 YHDAWSDRYGRPDQILASPALARACPDAMPETLRHGMALEAARNDGPHLPDVGRHRPHAS 290 Query: 294 DHCPISIDY 302 DH + I+ Sbjct: 291 DHAALMIEI 299 >gi|328719125|ref|XP_001944002.2| PREDICTED: putative neutral sphingomyelinase-like [Acyrthosiphon pisum] Length = 380 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 41/295 (13%), Positives = 86/295 (29%), Gaps = 42/295 (14%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+ + + NI L K + K + L N D+V LQE Sbjct: 2 KLSIFTLNIWGL---------KLTSKDRNARVRALADSLTNNGYDVVCLQE--------- 43 Query: 83 VFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAKDS 136 ++ ++ + ++ + + + + + + + + + + + Sbjct: 44 LWCEDDYKHLKASCDNVFKYIHYFHSGMLGSGMCIMSRYPIIDHLYHSFILNGYLHMFWH 103 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 G + + + G + V HL + + + T QA + I Sbjct: 104 GDWFGGKGIGLCRINVEGFIVDVYTTHLHACYNASNDKYTN-----HRIIQAFETANLIR 158 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-- 254 V+AGD N N + + N +S + N Sbjct: 159 VTSSGSDLAVLAGDLNSNPNDICYK---LICLGANMIDSYSSCLNNSIEYTYSHPENSYK 215 Query: 255 ------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY + N ++ + L + + SDH PI ++ Sbjct: 216 DANEINDRIDYILYKSNEKNLVVVKEHRHSL--PHRVPGQDFSYSDHEPIEAVFE 268 >gi|255531289|ref|YP_003091661.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] gi|255344273|gb|ACU03599.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] Length = 278 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 39/313 (12%), Positives = 92/313 (29%), Gaps = 50/313 (15%) Query: 1 MIR-KYVLALVFFLVPCTA---SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 M + K + L+ ++ C+ K+R++S+NI + TT + Sbjct: 1 MKKLKTIFLLLALIMTCSGLQVFAQHKLRVISYNI-----------LEGMKNDTTKGKQV 49 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + K+ DI+ LQE + ++ + H + + Sbjct: 50 FVNWVKSYAPDILALQECNKFTQLSLEEMAARY----------GHPYAILVKTTGYPVGI 99 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 K V Q + + ++ + L+ H + E Sbjct: 100 TSKYPIVDVQKI---------TDNMTHGFIVCKIKDLNVIVLHLNPHKYRKRREEIGEIL 150 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + + + + ++ + D+ GD + + + + SL Sbjct: 151 GTMAVAPVRKRWMIMGDF-NSFSPLDKDNYQDGDALKSLQEAAKKYSYHDNLVDGKSLDF 209 Query: 237 FPKEKDSRCNANKNLR-------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 +++ + K IDY + ++ K + F + Sbjct: 210 QVQQQILDFGLKDAGKIVEPGGIPKRRIDYIYVSKDLIKKVTTAHFIRDDFT-------- 261 Query: 290 KRLSDHCPISIDY 302 SDH P+ +++ Sbjct: 262 AGYSDHKPVIMEF 274 >gi|241205438|ref|YP_002976534.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859328|gb|ACS56995.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 369 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 47/366 (12%), Positives = 102/366 (27%), Gaps = 85/366 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSD----------YTLL--RQYAKNLD----- 65 +RL ++N+ L + + ++N +++ Y L + D Sbjct: 2 SLRLATFNVENLLTRFDFTGFRNQLRQDRVIKLFQVSSEGVYQQLEQARVIAATDDTRQM 61 Query: 66 ---------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 ADI+ LQE+ + A+ + + + R + + + I A+ + Sbjct: 62 SALAIADADADILCLQEIDNMAALQAFEYGYLFRMVGNGYRQKYLVEGNDSRGIDVAVLM 121 Query: 117 RK------KNVRVLQQSYPLLGAKD-------------SFSRAGNRRAVELLVEINGKKI 157 R+ K +S+ + +D + R +EL + I G+ Sbjct: 122 REETRDGQKIELRDIRSHAMTTYRDLDLFDEELALTNRIDDKIFKRDCLELDLLIGGRPF 181 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFNR 213 + +H KS + + + +A+ ++ I + + F I GD N Sbjct: 182 SLYVVHFKSMGNPRDGLDGRQSTMPIRRAEARAVRGIIEDRFGAEQAGTKSFAICGDMND 241 Query: 214 ----------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-- 255 + + + + + R Sbjct: 242 YQERVDVIGRRGTGYRFEHQNETASALDVFSSDGFAENVVRRREPLDRWTLYHARGPQEQ 301 Query: 256 ---PIDYFVMDQNAYKFLIQESFSEI---------------LYNEDDIKSRGKRLSDHCP 297 +DY + I + + SDHCP Sbjct: 302 WLCQLDYLWLSPALAAHNAGCLPEIIRSGQPYRTVFPPGQEVERYPRTGWDRPKASDHCP 361 Query: 298 ISIDYD 303 + + D Sbjct: 362 VVMTLD 367 >gi|118602958|ref|YP_904173.1| exodeoxyribonuclease III [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567897|gb|ABL02702.1| exodeoxyribonuclease III [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 256 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 85/304 (27%), Gaps = 76/304 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAKV 83 R+++ N+N + E + + K +AD++ LQE N + + Sbjct: 3 RIITANVNGIRAAEQKGFF---------------DWIKIQNADVICLQETKAQENQLDER 47 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + +Y + + +S + + P R Sbjct: 48 FYPKEYHCYYQSAKKKGYSGTAIFTKQ---------VPIQVIKKSPW-----ENINFEGR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + + V+ I++ S ++ + ++ + K S Sbjct: 94 F-----IRADFEDLSVISIYIHSGSVKQKRQDLKMAFLTERFM------PYLQEIKISGR 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTID----PNDSLIRFPKEKDSRC-----------NAN 248 +I GD N + + P + + Sbjct: 143 KVIICGDMNIVHQERDIKNWKANQKNSGCLPKERAWLDELFFEVGFIDSFREVNQEERQY 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY ++ N + S + +R SDH P+ Sbjct: 203 TWWSNRGQAWANNVGWRIDYQILTPNLKDTIKSVSI-----------YKDERFSDHAPLI 251 Query: 300 IDYD 303 I+Y+ Sbjct: 252 INYN 255 >gi|311898258|dbj|BAJ30666.1| hypothetical protein KSE_48880 [Kitasatospora setae KM-6054] Length = 302 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 38/332 (11%), Positives = 83/332 (25%), Gaps = 84/332 (25%) Query: 23 KVRLVSWNINTLSE--QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +R+ ++N+ +G + L +LDAD++ LQE+ Y Sbjct: 3 TLRIATYNLLHGQPLAPDGSPAPFPAEPGAP-----LADAVASLDADVLALQEVDRYQER 57 Query: 81 A----------KVFPKNTWCIFYSTERLI------------------NHSKRDSNNDIHT 112 + K W + ++ Sbjct: 58 SGRTDQAAVAAKAMGAADWRFAAALHGTPAPGAGWLADPARPGLAVYGPGDLADDSRPSY 117 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFS------------RAGNRRAVELLVEINGKKIWVL 160 A+ + + ++ A R A+ ++ G + V+ Sbjct: 118 GTALLTRLPVLHWRARRFAPAPFGLPLRVAGRRGLTPVPDEPRAALAAVLAGPGGEFTVV 177 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------- 212 HL + Q ++ WI P+++ GDFN Sbjct: 178 AAHLSFVPGWNVG-------------QLAAIRRWIADLP---QPYLVLGDFNLIGAVPRT 221 Query: 213 -RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 + + + +R + R + D+ + Sbjct: 222 VLGSAHAIQRTARRERVRTARRTRLQGWYDLARTPTYPSHRPTVQFDHIL---------- 271 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +SDH P+ +D + Sbjct: 272 --GIGVPRSTVGSVAAPRTPVSDHRPLVVDIE 301 >gi|224074261|ref|XP_002304326.1| predicted protein [Populus trichocarpa] gi|222841758|gb|EEE79305.1| predicted protein [Populus trichocarpa] Length = 617 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 39/338 (11%), Positives = 86/338 (25%), Gaps = 68/338 (20%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYN 78 +++VS+N+N L + S + L DADI+ QE + Sbjct: 2 GNPIKIVSYNVNGLR-------------QRVSQFGSLSNLLNTFDADIICFQETKLRRQE 48 Query: 79 AVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + + + F+S R + + S + + V G Sbjct: 49 LTSDLVIADGYESFFSCTRTKDKGRTGYSGVATFCRVKSAFSSTEVALPVAAEEGFTGFI 108 Query: 138 SRAGNRRAVE-------LLVEINGKKIWVLDIHLKSFC-FLDSLENTYSPSCSLLSQQAQ 189 R +E + V+ G+ + H F + + + + + Sbjct: 109 DRCKRNEGLEEFEKDELVKVDSEGRCVVTDHNHFVLFNLYGPRAAHDDTERIEFKMKFFK 168 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGN------------NDDFWKTI-------DP 230 L+ + GD N + F + Sbjct: 169 ILQKRWENLLHEGRRVFVVGDLNIAPTAMDRCDADSDFEKNEFRRWFRSILMMSGGLFVD 228 Query: 231 NDSLIRFPKEKDSRCNANKN----LRNKIPIDYF-----------------VMDQNAYKF 269 + + C ++ ID+ + + + Sbjct: 229 VFRAKHPDRREAYTCWSSSTGAELFNFGSRIDHILCAGPCLHQEHDLQGHNFLSCHVKEC 288 Query: 270 LIQESFSEILYNEDDIKSRGKRL----SDHCPISIDYD 303 I + + G+ + SDH P+ + + Sbjct: 289 DILTQYKRWKPGDSTRWKGGRGIKLEGSDHAPVYMSLE 326 >gi|167523152|ref|XP_001745913.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775714|gb|EDQ89337.1| predicted protein [Monosiga brevicollis MX1] Length = 585 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 39/321 (12%), Positives = 83/321 (25%), Gaps = 71/321 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + + ++N+ L + +T + + N+ AD++ LQE+ + + Sbjct: 100 DLTVATYNLFGLR------------LAWETRWTGICKILGNVQADVLALQEVMKHEPTST 147 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + Y + D +A+ + + Q+ PL S A Sbjct: 148 QAHLLAQELGYEYVYYARAHEADPKEGGEEGLAIVSRFPAAVVQTVPLTPMPGSV-DANA 206 Query: 143 RRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R + + + G+ + VL H + A+ L ++ Sbjct: 207 RVFLHARFDTIPALAGESLHVLANHWTY-------------DATAQCHAARELLAYLDAL 253 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTI----------------------------DP 230 + V+ GD N +N D + P Sbjct: 254 PAAD-HVVLLGDLNIYVNSEWPLDWLTNRVPAPLREHTVNRCAEAMRQYQAGQSDSARRP 312 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPI---------DYFVMDQNAYKFLIQESFSEILYN 281 + N D ++ A L++ Sbjct: 313 AFRDVWHTSFAWDPGWTFTNFHYTNRTNLYERATRPDRILLRSEA---LVERDVYLFGDA 369 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 D + SDH ++ + Sbjct: 370 LDGLVQPHLYASDHRGVATTF 390 >gi|325954749|ref|YP_004238409.1| endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922] gi|323437367|gb|ADX67831.1| Endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922] Length = 325 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 39/324 (12%), Positives = 94/324 (29%), Gaps = 49/324 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNS----------VKRTTSDYTLLRQYAKNLD------ 65 ++ + +N+ ++ + + S R + +L Sbjct: 2 KQFTIAFYNVENFYARQLHTTDEESFIVGNKQKWNTSRYAKKLDQVCTTLHHLGRQETGS 61 Query: 66 -ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-NVRV 123 + L E+ + + + +S +I+ A+ +K + Sbjct: 62 SPTFIGLAEVENALVLEDIVSHPQ---LFSDGYDYIFYDSLDERNINVALLYKKDETTIL 118 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + ++ R+ R + + + + + + +HL S ++ S + Sbjct: 119 DSKPIRVVFRNTLGIRSYTRDVLWVKAKHCDEILHLYVLHLPSRRGGLLNQHKRSNILQV 178 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-----WKTIDPNDSLIRFP 238 L + L KE V+ GDFN N + + + ND F Sbjct: 179 LKNELDILYA-----KEHEPNIVMMGDFNDTPNNSQLINILSTKANLQDVRSNDLFNPFV 233 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKF----------------LIQESFSEILYNE 282 K + + ++ D + +N K I + + + Sbjct: 234 KMMNYDTGTIVYKKQRLIFDQMLFSKNFIKKDSFFHWKKSQIFNPNKFIFNNINTSTQPQ 293 Query: 283 DDIKSRGK--RLSDHCPISIDYDF 304 + + + SDH PI ++ Sbjct: 294 NTFRGKNYFGGPSDHFPIISIINY 317 >gi|29830170|ref|NP_824804.1| exodeoxyribonuclease [Streptomyces avermitilis MA-4680] gi|29607280|dbj|BAC71339.1| putative exodeoxyribonuclease [Streptomyces avermitilis MA-4680] Length = 287 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 35/312 (11%), Positives = 79/312 (25%), Gaps = 73/312 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYN 78 A + + S N+N L ++ AD++ LQE+ Sbjct: 19 AGVLTVTSVNVNGLRAAAKKGF---------------VEWLAETSADVLCLQEVRAEPDQ 63 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 A V + W + ++ + V + + P S Sbjct: 64 LPAGVRAPDGWHVVHAPAAAKGRAG-----------------VSLYTRREPDRVRVGFGS 106 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + + ++ G + V ++L S ++ + L++ Sbjct: 107 AEFDGGGRYVEADLPG--VTVASLYLPSGEVGTERQDEKYRFMGEFLTHLKDLRERA--- 161 Query: 199 KESLVPFVIAGDFNRKINY----------------LGNNDDFWKTI--DPNDSLIRFPKE 240 ++ GD+N + + + + + Sbjct: 162 AADGREVLVCGDWNIAHQEADLKNWRGNRKNAGFLPEEREWLGRVLSPEDGGYVDVMRAL 221 Query: 241 KDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + IDY V ++ + + +R Sbjct: 222 HPDVEGPYSWWSYRGRAFDNDSGWRIDYEVATPGLAAKAVKGFV-------ERAATHEER 274 Query: 292 LSDHCPISIDYD 303 SDH P+++ YD Sbjct: 275 WSDHAPVTVVYD 286 >gi|46135919|ref|XP_389651.1| hypothetical protein FG09475.1 [Gibberella zeae PH-1] Length = 602 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 39/330 (11%), Positives = 93/330 (28%), Gaps = 64/330 (19%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIVFL 71 + + + + + +N L+ + + Q + L D++FL Sbjct: 284 VSFTSKGSCKGITVADYNTENLNPESAHLPLV------------VGQIVEKLRTPDLIFL 331 Query: 72 QEMGSYNA------------VAKVFPKNTW-----CIFYSTERLINHSKRDSNNDIHTAI 114 QE+ + +A + + N +I A Sbjct: 332 QEVQDNSGAANDGVVSANKTLAALADGIEAASGVVYEWAEVVPDNNVDGGQPGGNIRQAY 391 Query: 115 AVRKKNVRVLQ------------------QSYPLLGAKDSFSRAGNRRAVELL---VEIN 153 R V++++ + P + +R+ + V+ Sbjct: 392 LYRPDVVQLVKPNEGSASDVNAVLDGPTLKFNPGRIDPANSVWDNSRKPLAAEWKPVKGT 451 Query: 154 GKKIWVLDIHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESL--VPFVI 207 K + +++H S S+ ++Q++ D++ Q + ++ Sbjct: 452 KKSFFTVNVHFGSKGGSSSIHGDARTPVNKGVEKRTKQSEVTADFVAQILKKDKKAHVIV 511 Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 AGDFN + D + + K + N +D+ + + Sbjct: 512 AGDFNEFADVEPI--DTFVKTSGLVDIDDAAKIPMTERYTYLFDSNCQALDHMFISKELR 569 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 K + + + +SDH P Sbjct: 570 K-----GIKYEHMHINTWQDTAGEVSDHDP 594 >gi|241760900|ref|ZP_04758989.1| Endonuclease/exonuclease/phosphatase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753130|ref|YP_003226023.1| endonuclease/exonuclease/phosphatase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283856234|ref|YP_162080.2| endonuclease/exonuclease/phosphatase [Zymomonas mobilis subsp. mobilis ZM4] gi|241374519|gb|EER63980.1| Endonuclease/exonuclease/phosphatase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552493|gb|ACV75439.1| Endonuclease/exonuclease/phosphatase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775229|gb|AAV88969.2| Endonuclease/exonuclease/phosphatase [Zymomonas mobilis subsp. mobilis ZM4] Length = 239 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 81/280 (28%), Gaps = 53/280 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++ S+NI+ K D + +DAD V LQE + Sbjct: 7 TIKVASYNIH-----------KAIGADKRRDPERILSVLDEIDADCVVLQEADHRLGKRR 55 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + S A+ +R V + L R Sbjct: 56 AILPFDALAAHGYSYVPLSLRSCSLGWHGNALLLRDFASCVAYERVRLP-------RLEP 108 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R A+ ++I G+ ++ HL S +Q ++ D + + Sbjct: 109 RGAIICDIKIRGRVWRLIGSHLDL-------------SGLFRRRQVAFIVDRLR-NLQRD 154 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 +P VI GDFN+ G + P+D + + +D ++ Sbjct: 155 LPTVIMGDFNQWRRRDGCLR-----LLPDDFSVLPTGASFPAQHPLVG------LDRIII 203 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ ++ SDH P+ Sbjct: 204 APQI--RYLECGVHNTPL--------ARQASDHLPVWAKL 233 >gi|21229767|ref|NP_635684.1| hypothetical protein XCC0289 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766643|ref|YP_241405.1| hypothetical protein XC_0299 [Xanthomonas campestris pv. campestris str. 8004] gi|188989710|ref|YP_001901720.1| hypothetical protein xccb100_0314 [Xanthomonas campestris pv. campestris str. B100] gi|21111259|gb|AAM39608.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66571975|gb|AAY47385.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] gi|167731470|emb|CAP49645.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris] Length = 253 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 39/279 (13%), Positives = 78/279 (27%), Gaps = 45/279 (16%) Query: 30 NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK----VFP 85 N+ TL+ G L + LR+ + + A+IV LQE+ +A+ +P Sbjct: 12 NVLTLNAHMGFDL-----LKRRFILAALREAIREVCAEIVCLQEVLGEHALHARRHAQWP 66 Query: 86 KNTWCIFYSTERLI--NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ + H AV K ++ + R Sbjct: 67 AVAHYEYLAEMLWPQFSYGRNAVYPHGHHGNAVLSKFPISSFANHDVSVPGH-----EPR 121 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++++ G + + + QQ L + + Sbjct: 122 GVLHAVLQVPGWSEELQVFCVHLGLH-----------EAHRQQQIGLLCARVAA-LSADA 169 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 P V+AGDFN + + + + +P+D + Sbjct: 170 PVVVAGDFNDWRARGHP------LLTRCGLVEAVECMHGRVARSFPSRFPVLPLDRIYLR 223 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + RLSDH P+ Sbjct: 224 N----------LRVVQARVLSGLP-WSRLSDHLPLLASI 251 >gi|162448422|ref|YP_001610789.1| polynucleotide adenyltransferase [Sorangium cellulosum 'So ce 56'] gi|161159004|emb|CAN90309.1| Polynucleotide adenyltransferase [Sorangium cellulosum 'So ce 56'] Length = 961 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 41/292 (14%), Positives = 82/292 (28%), Gaps = 42/292 (14%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 T + ++R++SWN + T LL + DAD++ LQE+ Sbjct: 116 FTPGASARLRVLSWNTLW-------DRYDAERIHTARRRPLLVEALGRADADVIALQEVE 168 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + ++ + L S + Sbjct: 169 LPLLDLLLGAGWVRADYTVSDGPRGRDVETCHL---------------LLLSRLPVLEVG 213 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + + AV + + + G+ + V+ HL S + E A L+D Sbjct: 214 WHALGKYKAAVAMTLALAGEPLVVVATHLTS---DHAEEGARKR--------AAELEDLA 262 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNN----DDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 V+ GD N + D + + D F + + Sbjct: 263 AGLSAVEGDLVLLGDLNDGGPGPASKLGLVDAWLEARGAGDEAPTFDPTVNPLAAVSSLT 322 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D + A + + + + G LSDH + ++ Sbjct: 323 GRACRLDRVMFRGAALRPITADLEGTTP-----LPPDGLFLSDHYGVRVELS 369 >gi|260911306|ref|ZP_05917905.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp. oral taxon 472 str. F0295] gi|260634566|gb|EEX52657.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp. oral taxon 472 str. F0295] Length = 344 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 35/324 (10%), Positives = 91/324 (28%), Gaps = 60/324 (18%) Query: 26 LVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLDAD------- 67 + +N L + ++ + + T + + ++ D Sbjct: 25 VGFYNQENLFDTCHDEGKRDYEFLPSGSYKWNGMKYTHKLHNMARALADMGTDVLPGVGC 84 Query: 68 -IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 I+ L E+ + + + + + H + I A+ V Sbjct: 85 AIIGLAEVENAKVLTDLTAQPE---LATRGYKFCHIEGPDRRGIDCALLYNPSLFEVRNV 141 Query: 127 S-YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 P + + + S R + + + G+ + V+ HL S + Sbjct: 142 KLVPYVQSLEKDSAFFTRGFLTVSGVLAGEHVTVVVCHLPSRFSDSFYREQGAR------ 195 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW------KTIDPNDSLIRFPK 239 Q ++D I Q+++ ++ GD N ++ + + + + Sbjct: 196 -QVLAIRDSI-QREDKNCKVLVMGDMNDDPMDKSMSEALRGKANINEVAEGDMYNPWYNV 253 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK--------- 290 + + D ++ +N + ++ + Y ++ I R Sbjct: 254 LTKEGVGTLQFQGSWNLFDQILLSKNWLNANGSKDYTSLKYWKNQIFRRDYLFQTEGKYK 313 Query: 291 --------------RLSDHCPISI 300 SDH P+ + Sbjct: 314 GMPKRTTAGGVWLDGFSDHLPVVV 337 >gi|226953375|ref|ZP_03823839.1| exodeoxyribonuclease III [Acinetobacter sp. ATCC 27244] gi|226835913|gb|EEH68296.1| exodeoxyribonuclease III [Acinetobacter sp. ATCC 27244] Length = 274 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 81/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +R+VS N+N L L ++ + DAD+V +QE ++ Sbjct: 14 LRVVSINVNGLRASVTKG---------------LLEWLEQSDADVVCMQESRITHEQWTD 58 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 F W ++ A+ + V + DS R Sbjct: 59 KFKPEGWYTHLFPAERAGYA----------GTAIYSRLPFVSVTNGLGFELADSQGRF-- 106 Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++ + + ++L S D + + + + Q ++ Sbjct: 107 ---ITAEFDLGLSHPVHIASLYLPSGSSGD-------EAQARKDIFLEEYAKILKQWRDE 156 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD+N + + + I + +E Sbjct: 157 NKSIIVCGDYNIVHKRIDIKNWSGNQKSSGVLPHERAWLDHIYDELGYVDTFREVRPEAE 216 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + + + SDH P Sbjct: 217 LYSWWSNRGQARAKNVGWRIDYHACSPDWKARTANAWV-----------YKEQWFSDHAP 265 Query: 298 ISIDY 302 + IDY Sbjct: 266 VIIDY 270 >gi|156548838|ref|XP_001605640.1| PREDICTED: similar to GA16037-PA [Nasonia vitripennis] Length = 558 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 37/346 (10%), Positives = 86/346 (24%), Gaps = 66/346 (19%) Query: 24 VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++ +N+ + + ++ + + ++ ADI+ LQE+ + Sbjct: 198 FTVMCYNVLSDKYATRQMYGYCPSWALEWEYRKKGILDEIRHYAADIISLQEVETDQFYN 257 Query: 82 KVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 P+ + + +++ V Q + Sbjct: 258 FFLPELKMDGYDGIFSPKSRAKTMAENDRKFVDGCAIFFRTAKFTLIKEHLVEFNQLAMA 317 Query: 130 LLGAKDSFSR---AGNRRAVELLVE---------INGKKIWV---LDIHLKSFCFLDSLE 174 D + + L+ + + V + + + Sbjct: 318 NAEGSDHMLNRVMPKDNIGLAALLRTKEAAWDNGLPQDPLQVQQPILVCTAHLHWDPEFC 377 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVP-------FVIAGDFNRKINY---------- 217 + +LS + + + D Q ++ GDFN + Sbjct: 378 DVKLIQTMMLSNELKSILDQAGQSFRPGHKSDASNVQLLLCGDFNSLPDSGVIEFLTSGR 437 Query: 218 -LGNNDDF--------WKTIDPNDSLIRFPKEKDSRC--------NANKNLRNKIPIDYF 260 ++ DF + I D F N K IDY Sbjct: 438 VASDHRDFKDLAYKSCLQKISGCDKTNEFTHSFKLASAYSEDIMPYTNYTFDFKGIIDYI 497 Query: 261 VMDQNAYK---FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + L S ++ SDH P+ ++ + Sbjct: 498 FYSKQSMVPLGLLGPLSADWFREHKVVGCPHPHVPSDHFPLLVELE 543 >gi|56963720|ref|YP_175451.1| exodeoxyribonuclease III [Bacillus clausii KSM-K16] gi|56909963|dbj|BAD64490.1| exodeoxyribonuclease III [Bacillus clausii KSM-K16] Length = 260 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 79/301 (26%), Gaps = 78/301 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VSWN+N L + + +DAD+ LQE Sbjct: 1 MKFVSWNVNGLRACVKKGF---------------LDFFQQVDADVFCLQETKLQKG-QIS 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K+ + G D F R Sbjct: 45 LELPGYEQYWNDAERKGY----------SGTAIFTKHSPLSVT----YGIGDHFPENEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +V+ ++ + S + L + Sbjct: 91 -----VITLEFETYYVVTMYTPNAKRDLSRLPYRLQWEKAAREYLTLLA--------TQK 137 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V GD N + + + + F +A Sbjct: 138 PVVFCGDLNVAHQPIDVRNDRANVGNSGFTDEERAEFGKLLEAGFVDTFRHFYPDDEDAF 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ + +L+ S + SDHCPI Sbjct: 198 TWWSYMANVRARNIGWRIDYFLISRALMPYLVDASIHSSVL-----------GSDHCPIE 246 Query: 300 I 300 + Sbjct: 247 L 247 >gi|261337556|ref|ZP_05965440.1| exodeoxyribonuclease III [Bifidobacterium gallicum DSM 20093] gi|270277965|gb|EFA23819.1| exodeoxyribonuclease III [Bifidobacterium gallicum DSM 20093] Length = 286 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 81/311 (26%), Gaps = 57/311 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + + + N+N + E ++ + D++ LQE+ + Sbjct: 2 TITVTTANLNGIRAAERKGFE---------------KWVQKHTPDVLCLQELRAPQDAID 46 Query: 83 VFPKNTWCIFYSTERLINHSK-----RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + + ++ + S + + ++ +D+ Sbjct: 47 SIFEQYAEDYKNAGKIAQPEGLSTIDQVSVFKGRAGVGELSSLEVLDKRVGLPGDGEDAD 106 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 + R + G I V +++ + D +L + + Sbjct: 107 T---GRWTEMDVKTPQGYVITVCNLYNHAGNMDD--PTKMEQKYHMLDAIMERAAQLRDE 161 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEK 241 +I GDFN L D K ID + + Sbjct: 162 AAHGGKQSLIVGDFNIAHTDLDIKDATTNETHSGFSPKERAYITKLIDEYEFVDVVRDLA 221 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 N+ IDY + + + K+ R Sbjct: 222 GDIQGPYTWWSNRGRAFENNVGWRIDYQFATPEIAQ-------TARGFEISRAKAWYARW 274 Query: 293 SDHCPISIDYD 303 SDH P+++ YD Sbjct: 275 SDHAPLTVTYD 285 >gi|332520152|ref|ZP_08396616.1| exodeoxyribonuclease III Xth [Lacinutrix algicola 5H-3-7-4] gi|332044711|gb|EGI80905.1| exodeoxyribonuclease III Xth [Lacinutrix algicola 5H-3-7-4] Length = 253 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 36/302 (11%), Positives = 87/302 (28%), Gaps = 72/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+N+N + ++ + + D++ LQE+ + V Sbjct: 1 MKIISYNVNGIRAALKKGF---------------IEWLEGANPDVLCLQEIKAMQDQVDV 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y N ++ +A+ K ++ G R Sbjct: 46 EAFEALGYKYHYWFSAN-------KKGYSGVAILSKIKP----NHVEFGTGIETMDFEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + V+ ++L S ++D++ + +E++ Sbjct: 95 N-----IRADFDGVSVMSMYLPSGT--------NMDRLEFKLNYMDEIQDYVNKLRETIP 141 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-------------NKN 250 VI GD+N + ++ K + + R Sbjct: 142 NLVICGDYNICHEAIDIHNPKMKNVSGFLPVEREWIGNFIDSGLVDSYRYLNPEKVEYSW 201 Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + +DY ++ Q + + + + SDHCPI ++ Sbjct: 202 WSYRANARANNKGWRLDYAMVTQPLKQKIKRAVILTQAVH-----------SDHCPILLE 250 Query: 302 YD 303 D Sbjct: 251 LD 252 >gi|225441541|ref|XP_002280990.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297739794|emb|CBI29976.3| unnamed protein product [Vitis vinifera] Length = 603 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 91/348 (26%), Gaps = 64/348 (18%) Query: 19 SVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 S A ++S+NI + + E S + L + ADIV LQE+ S Sbjct: 248 SSAGTFTVLSYNILSDVFATSELYSYCPSWALSWPYRKQNLLREIVGYRADIVCLQEIQS 307 Query: 77 ---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 A K+ + Y + ++ D R + V + A Sbjct: 308 DHFEEFFAPELDKHGYQALYKRKTNEVYTGNIHTIDGCATFFRRDRFSHVKKYEVEFNKA 367 Query: 134 KDSFSR-----AGNRRAVELLVEINGKKIWVLDIHLKSFCFL-----------DSLENTY 177 S + A + A+ LV+ N I VL+ ++ N + Sbjct: 368 AQSLTDAVVPSAQKKTALNRLVKDNVALIAVLEAKFSYQGADIPGKRQLLCVANTHINVH 427 Query: 178 SPSCSLLSQQAQWLKDWITQKKES-LVPFVIAGDFNRKINYLGN---------------- 220 + Q L + + S +P ++ GDFN + Sbjct: 428 QELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVDPMHPDLA 487 Query: 221 -------------------------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 I R + + Sbjct: 488 IDPLGILRPASKLTHQLPLVSAYSSFARMGVGIGLEQQRRRLDPSTNEPLFTHCTRDFIG 547 Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +DY + + E E +D + SDH + ++ Sbjct: 548 TLDYIFYTADSLTVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEF 595 >gi|123474556|ref|XP_001320460.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas vaginalis G3] gi|121903266|gb|EAY08237.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas vaginalis G3] Length = 481 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 40/291 (13%), Positives = 82/291 (28%), Gaps = 24/291 (8%) Query: 26 LVSWNIN--TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 L+S+NI + L+ + IV LQE+ K+ Sbjct: 150 LLSYNILAPYCVRPDRFPFSPPKYLNADQRIALIEEQIIEFPVSIVCLQEVEGSVYKEKL 209 Query: 84 FPKNTWCIFYSTERLINH------------SKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 P F+ T + + ++ + ++ L Sbjct: 210 EPFMHERGFHCTYCQKGRAEKLNEAFREMVHGQATFVRNSHLTVIKTECIQYRNMQQAQL 269 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + + + A+ +V+ + I + + + S L+ +A Sbjct: 270 LPSFAELKKHDETAIISIVQHKSAPNLFIAIVNIHLYWEQTGNDDVRTSQLYLALEA--- 326 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 I ++ S +IAGDFN + + + + N + S Sbjct: 327 AKNIVKQHSSNYDIIIAGDFNSESQTTPH-----RWLVQNGFFDVYDSFGLSPRFTIYGA 381 Query: 252 RNKIPIDYFV--MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ID+ +++ ++Q E + SDH PI Sbjct: 382 SFHKTIDFIYSTVNKIRPISILQSYNEEEILQRYVAFPHDYFPSDHLPIVA 432 >gi|310794858|gb|EFQ30319.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola M1.001] Length = 603 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 36/327 (11%), Positives = 83/327 (25%), Gaps = 65/327 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNAVA 81 + + +N+ L+ +++ + + + D++F+QE+ + Sbjct: 293 ITVGDYNVENLAP-------------SSAHLPSIAAHIVDYMKTPDLIFVQEIQDNSGPT 339 Query: 82 -----------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 F + + +I A + V + Sbjct: 340 NNGIVSSNITLTTLTTEIESRSGVVYDFAVVDPVDGKDGGQPGGNIRVAYLYKPDVVELW 399 Query: 125 Q------------------QSYPLLGAKDSFSRAGNRRAVELLVEI----NGKKIWVLDI 162 + + P A S + +R+ + K + +++ Sbjct: 400 KPNPGGSLDANEVLPGPELKYNPGRIAPASSAWDASRKPLVAAWRTVKGTQSKTFFTVNV 459 Query: 163 HLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKIN 216 HL S SL P + +QAQ +I + + + +GDFN Sbjct: 460 HLASKGGSSSLHGDLRPPVNGVVNARIEQAQLAGSFIAEILAADPDASVISSGDFNEFAF 519 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 + L N +D+ + Sbjct: 520 VEPLK--VFAAKSGLFDLDEVVGTPAEERYTYAYDMNAQELDHIFVSPALAARNGTAYEH 577 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + +SDH P + Sbjct: 578 IH---VNSWELYDELVSDHDPSVARLN 601 >gi|229161351|ref|ZP_04289336.1| hypothetical protein bcere0009_21400 [Bacillus cereus R309803] gi|228622165|gb|EEK79006.1| hypothetical protein bcere0009_21400 [Bacillus cereus R309803] Length = 349 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 45/329 (13%), Positives = 87/329 (26%), Gaps = 61/329 (18%) Query: 22 QKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYT------------LLRQYAKNLDAD 67 + +++WNI + + + +R T +T + D Sbjct: 30 GPLTIMTWNIYFGTILTPLVGTTPEQLPQRVTEVFTLFQATNFPVRAGAIADQIARKKPD 89 Query: 68 IVFLQEMGSYNAV-----AKVFPKNTWCIFYSTERLINHSKRD------------SNNDI 110 I+ LQE + + + I S+ Sbjct: 90 IIGLQEAAIWQLLLPQNSEVAVEYDFVSILLKELEKRGLHYEVLAIVETTDATLPSSTGF 149 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV------------ELLVEINGKKIW 158 + R + + A V + VEI+GKK Sbjct: 150 NVRFVDRDAILVRKNSGLKFSNIQTKIFEAFLPVPVGGNVEKLLFGFISVDVEISGKKFR 209 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 +++ HL+ L Q ++ +T + +P V GDFN + Sbjct: 210 LVNTHLQPITP---------EIPQTLPIQLAQTRELLTGPGATDLPLVFIGDFNSNSDGS 260 Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQE 273 G + + D+ K C N + + ID + + + Sbjct: 261 GPSYNLLINAGFKDTWTIAGKGNGLTCCQDANVLNLISQLFVRIDLILFRGDFKVEKVD- 319 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302 I ++D SDH + + Sbjct: 320 ---VIGEEQEDRTPTALWPSDHAGVVANL 345 >gi|255689971|ref|ZP_05413646.1| AP endonuclease domain protein [Bacteroides finegoldii DSM 17565] gi|260624578|gb|EEX47449.1| AP endonuclease domain protein [Bacteroides finegoldii DSM 17565] Length = 361 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 89/305 (29%), Gaps = 67/305 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++++S+N+ + S + + Y KN +ADI+ LQE + + Sbjct: 99 GSIKVLSYNVMSFSNLKKKDGKNP-----------ILSYLKNSNADIICLQEYNTASNKK 147 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 V ++ + +R +A + + Q + + Sbjct: 148 FVTEQDVKKALKAYPYQSIRQQR----KGDVQLACFSRFPILSSQLIEYKSDYNGSMKY- 202 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------- 178 ++ +N I +++ HL+S Y Sbjct: 203 -------VLNVNNDTITLINNHLESNKLTKEDRGIYEDMIKDPNAKKVKTGLRQLIRKLG 255 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + ++ + QA + I + ++ GDFN + + + +D F Sbjct: 256 EASAIRASQADSVARII--TENHYPTMIVCGDFNDG-SISYTHRVLTQELDD-----AFT 307 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + ID ++ + + + R + SDH PI Sbjct: 308 QSGKGLGISYNQNKFYFRIDNILISPDLKAY-------------NCTVDRSIKASDHYPI 354 Query: 299 SIDYD 303 Sbjct: 355 WCYIS 359 >gi|120437855|ref|YP_863541.1| exodeoxyribonuclease [Gramella forsetii KT0803] gi|117580005|emb|CAL68474.1| exodeoxyribonuclease [Gramella forsetii KT0803] Length = 253 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 89/303 (29%), Gaps = 73/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + ++S+N+N + + + + + D+V LQE+ K Sbjct: 1 MTIISYNVNGIRA---------------AIRKGFLDWLQQSNPDVVCLQEI-------KA 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ + H +N ++ +A+ K + D R+ Sbjct: 39 QPEQLDLSEFEKAGYPYHYWYPANKKGYSGVAILSKTEPKNVTYGTGIDYMDFEGRS--- 95 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V+ ++L S L + + +I Q K + Sbjct: 96 ------IRADFDNFSVMSLYLPSGT--------NINRLELKFKFMDDFQRYIDQLKLEIP 141 Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249 +I+GD+N + +D W + I + + + Sbjct: 142 NLIISGDYNICHEAIDIHDPVRLKNVSGFLPEERKWIDGFMENGFIDSFRHFNEDPDNYS 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY ++ + L + Y+ SDHCP+ + Sbjct: 202 WWSYRANARNNNKGWRIDYNLVSEPLKDRLRRAVILPEAYH-----------SDHCPVLV 250 Query: 301 DYD 303 + + Sbjct: 251 EIE 253 >gi|157118577|ref|XP_001659160.1| nocturnin [Aedes aegypti] gi|108883222|gb|EAT47447.1| nocturnin [Aedes aegypti] Length = 446 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 41/324 (12%), Positives = 85/324 (26%), Gaps = 66/324 (20%) Query: 36 EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST 95 +G + Q D DI+ LQE+ + + K+ + + Sbjct: 111 HNDGFVKCPIDALTWECRRYQVIQEIVQNDPDIICLQEVDHFKFLQKILATQNYEGVFFP 170 Query: 96 ERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 + D+N A+ +K+ + +L +L S A+ + N Sbjct: 171 KPDSPCLYINDNNGPDGCAVFYKKERLELLNHFTRILEVWRVQSNQVAIAALFRTRDTN- 229 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 ++I V HLK+ + L ++Q + L +I P ++ GDFN + Sbjct: 230 QEICVTTTHLKA--------RKGALLSKLRNEQGKDLLYFIDGVA-EKRPVILCGDFNAE 280 Query: 215 INYLGNNDDF----------WKTIDPNDSLIRFPKE------------------------ 240 + + + + + Sbjct: 281 PIEPVYSTVLNYKPLGLGSAYSDLLAQEFPQLAQENDQNVVNMVPVVQHRTSIDSNHSVE 340 Query: 241 ---------------KDSRCNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEIL 279 + + + IDY ++ F Sbjct: 341 DDCSVSCSERTKAELSAAYEPPYTTWKIREEGEVCHTIDYVFYSKDQITVKNCLMFPAGE 400 Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303 D + SDH + D++ Sbjct: 401 EISPDRTPCYQYPSDHFSLVCDFE 424 >gi|233305|gb|AAB19427.1| Rrp1=recombination repair protein 1 [Drosophila, Peptide, 253 aa] Length = 253 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 75/303 (24%), Gaps = 80/303 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +++ SWN+ L Q + DI LQE + Sbjct: 1 LKICSWNVAGLRAWLKKDG---------------LQLIDLEEPDIFCLQETKCANDQLPE 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +V + ++ + +A+ K + + + D R Sbjct: 46 EVTRIPGYHPYWLCMP-----------GGYAGVAIYSKIMPIHVEYGIGNEEFDDVGRM- 93 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + +K +++++++ + L + L Sbjct: 94 --------ITAEYEKFYLINVYVPNSGRKLVNLEPRMRWEKLFQAYVKKLDAL------- 138 Query: 202 LVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P VI GD N + D + + F R Sbjct: 139 -KPVVICGDMNVSHMPIDLENPKNNTKNAGFTQEERDKMTELLGLGFVDTFRHLYPDRKG 197 Query: 247 ANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 A +DY ++ + +++ SDHCP Sbjct: 198 AYTFWTYMANARARNVGWRLDYCLVSERFVPKVVEHEIRSQCL-----------GSDHCP 246 Query: 298 ISI 300 I+I Sbjct: 247 ITI 249 >gi|262037757|ref|ZP_06011199.1| putative endonuclease/exonuclease/phosphatase [Leptotrichia goodfellowii F0264] gi|261748229|gb|EEY35626.1| putative endonuclease/exonuclease/phosphatase [Leptotrichia goodfellowii F0264] Length = 257 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 47/300 (15%), Positives = 86/300 (28%), Gaps = 54/300 (18%) Query: 1 MIRK-YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 MI+ ++ ++ F V A++ R++++NI G T + Q Sbjct: 1 MIKTGNIIRILLFTVIALTVNAKEFRMMTYNIYGGRLANG---------------TKIGQ 45 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 K D + LQE+ + + + K + IA K Sbjct: 46 SIKRYKPDFIALQEVDKFTKRSNIRDITKDIADEMGYNFYYFQKSRDYDSGEFGIAFVSK 105 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTY 177 +Y L R+ + +E + GK + ++ HL + E Sbjct: 106 YPIEKILTYELPSIGI-----EKRQVIAAKIEKSVFGKTVLFINTHLDYKQEAKNDELNS 160 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 I + + GD N +++ I N Sbjct: 161 L---------------LIMSEIAEGDIKFLGGDLNMLPTT-----EYYNQITQNWKDTYL 200 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 +K IDY + D + L + + +D +LSDH P Sbjct: 201 EGDKAGVRK-----NEDPRIDYILGDFSTNWKLKES------FFINDNTQEWTKLSDHLP 249 >gi|296140635|ref|YP_003647878.1| endonuclease/exonuclease/phosphatase [Tsukamurella paurometabola DSM 20162] gi|296028769|gb|ADG79539.1| Endonuclease/exonuclease/phosphatase [Tsukamurella paurometabola DSM 20162] Length = 396 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 91/356 (25%), Gaps = 76/356 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNA 79 VR+ ++N +L+ L + R ++ + + + D++ + E + NA Sbjct: 41 GTVRIATYN-ASLNRSREGELVADLGTRDNRQAQVIAEIVQRNNPDVLLINEFDYYADNA 99 Query: 80 VAKVFPKNTWCIFYSTERLINHSK-----------------------------RDSNNDI 110 A +F N + + +++ Sbjct: 100 AADLFRSNYLRVGQKGQHPVDYPYAWAPPVNTGVPSGRDLNGDGTTDGPDDAYGFGQFSG 159 Query: 111 HTAIAVRKKNVR----------VLQQSYPLLGAKDSFS-------RAGNRRAVELLVEIN 153 + V K L + P + R ++ ++ V I+ Sbjct: 160 QYGLLVLSKFPIDTQAIRTFQNFLWKDQPGSMLPRDYYGANADALRLSSKTHADVPVTID 219 Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK-----------DWITQKKESL 202 G++I + H F + + + A +L + Sbjct: 220 GQRIHLWVSHPTPPSFDGPEDRNGRRNHDEIRLSADYLAGGDRASYLYDDRGERGGLPAG 279 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID---- 258 PFV+ GD N + + + + E + A N R D Sbjct: 280 EPFVLLGDQNSDPEDGDSVPGAMQQVLDLTQDPKPTSEGAEQAGAGSNHRTPSRYDTADF 339 Query: 259 -----------YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 Y + + F + SDH + +D Sbjct: 340 SKPTPGNLRVDYVLPSKGLTVAGTGV-FWPAAGQPGAELMPPRTSSDHRLVWLDLT 394 >gi|148225041|ref|NP_001085229.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Xenopus laevis] gi|47937489|gb|AAH72056.1| MGC78928 protein [Xenopus laevis] Length = 316 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 84/302 (27%), Gaps = 73/302 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++ SWN+ +G+ W + + D I+ LQE+ K Sbjct: 60 TLKISSWNV------DGIRAWIKKQG---------LNWVREEDPHIMCLQEI---KCAEK 101 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + P + + E + + ++ +A+ K+ + + D R Sbjct: 102 LLPPDVKDM---PEYPHKYWACPDEKEGYSGVAMLCKDKPLNVTYGIGIEEHDKEGR--- 155 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 ++ +V+ ++ + + + L +S Sbjct: 156 ------VITAEFDSFFVIAAYIPNSSRGLVRLDYRQRWDVDFRAYLKGL--------DSK 201 Query: 203 VPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N + + + L F + + +A Sbjct: 202 KPLILCGDLNVAHQEIDLKNPKTNKKTPGFTPQERQGFGELLAEGYLDSFRELYPDKPSA 261 Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +DYFV+ + L + SDHCPI Sbjct: 262 YTFWTYMMNARAKNVGWRLDYFVLSKALRPALCDCKIRSKV-----------MGSDHCPI 310 Query: 299 SI 300 ++ Sbjct: 311 TL 312 >gi|262277234|ref|ZP_06055027.1| exodeoxyribonuclease III [alpha proteobacterium HIMB114] gi|262224337|gb|EEY74796.1| exodeoxyribonuclease III [alpha proteobacterium HIMB114] Length = 263 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 89/305 (29%), Gaps = 73/305 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAV 80 + + SWNIN + +Y +D DI+ QE+ Sbjct: 7 TMIISSWNIN----------------SVRIRTENIEKYLDKIDPDIIMFQEIKCEDDKFP 50 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 F K + + + +A+ K + + Sbjct: 51 NDFFEKKNYNCYV------------FGQKSYNGVAIISKKKLL------NIDKSFKDPNK 92 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +R + ++I GK + ++ I+L + +++ + Y + ++I ++ Sbjct: 93 QSR-LIAADIKIAGKLVKLICIYLPNGNPVNTDKYPYK------LKWLNNFINFIKKEIH 145 Query: 201 SLVPFVIAGDFNRKINYLG-------------------NNDDFWKTIDPNDSLIRFPKEK 241 + +I GDFN N + + ++K Sbjct: 146 NYDGIIIGGDFNIIPNSNDVGNPEDWGNDALYRLEIRKEFRKILNLGFKDSFRLFNTEDK 205 Query: 242 DSRCNAN---KNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 RNK ID+F++ + + D + SDH P Sbjct: 206 QYTFWDYTQGSWQRNKGLRIDHFLITDSICSKIKNVEI-------DKFTRGLNKPSDHSP 258 Query: 298 ISIDY 302 I +++ Sbjct: 259 IRVNF 263 >gi|147789110|emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera] Length = 603 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 91/348 (26%), Gaps = 64/348 (18%) Query: 19 SVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 S A ++S+NI + + E S + L + ADIV LQE+ S Sbjct: 248 SSAGTFTVLSYNILSDVFATSELYSYCPSWALSWPYRKQNLLREIVGYRADIVCLQEIQS 307 Query: 77 ---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 A K+ + Y + ++ D R + V + A Sbjct: 308 DHFEEFFAPELDKHGYQALYKRKTNEVYTGNIHTIDGCATFFRRDRFSHVKKYEVEFNKA 367 Query: 134 KDSFSR-----AGNRRAVELLVEINGKKIWVLDIHLKSFCFL-----------DSLENTY 177 S + A + A+ LV+ N I VL+ ++ N + Sbjct: 368 AQSLTDAVVPSAQKKTALNRLVKDNVALIAVLEAKFSYQGADIPGKRQLLCVANTHINVH 427 Query: 178 SPSCSLLSQQAQWLKDWITQKKES-LVPFVIAGDFNRKINYLGN---------------- 220 + Q L + + S +P ++ GDFN + Sbjct: 428 QELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVDPMHPDLA 487 Query: 221 -------------------------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 I R + + Sbjct: 488 IDPLGILRPASKLTHQLPLVSAYSSFARMGVGIGLEQQRRRLDPSTNEPLFTHCTRDFIG 547 Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +DY + + E E +D + SDH + ++ Sbjct: 548 TLDYIFYTADSLTVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEF 595 >gi|84490435|ref|NP_031896.3| deoxyribonuclease gamma precursor [Mus musculus] gi|3913469|sp|O55070|DNSL3_MOUSE RecName: Full=Deoxyribonuclease gamma; Short=DNase gamma; AltName: Full=DNase I homolog protein DHP2; AltName: Full=Deoxyribonuclease I-like 3; Short=DNase I-like 3; AltName: Full=Liver and spleen DNase; Short=LS-DNase; Short=LSD; Flags: Precursor gi|2905788|gb|AAC35753.1| liver and spleen DNase precursor [Mus musculus] gi|4098208|gb|AAD09222.1| DNase gamma [Mus musculus] gi|28192377|gb|AAK07733.1| DNase gamma [Mus musculus] gi|148688630|gb|EDL20577.1| deoxyribonuclease 1-like 3 [Mus musculus] Length = 310 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 95/302 (31%), Gaps = 34/302 (11%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 +L+ F++ ++A +RL S+N+ + S K ++ + K D Sbjct: 12 SLLLFILALHDTLA--LRLCSFNVRSFGA---------SKKENHEAMDIIVKIIKRC--D 58 Query: 68 IVFLQEMGSYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 ++ L E+ + + + N+ + + R++ + + A ++K V Sbjct: 59 LILLMEIKDSSNNICPMLMEKLNGNSRRSTTYNYVISSRLGRNTYKEQY-AFVYKEKLVS 117 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 V + Y +D + +R + + I S Sbjct: 118 V-KTKYHYHDYQDGDTDVFSREPFVVWFHSPFTAVKDFVIVPLHTTPET--------SVK 168 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 + + D +Q K F+ GDFN +Y+ + + + +++ Sbjct: 169 EIDELVDVYTDVRSQWKTEN--FIFMGDFNAGCSYVPKKAWQNIRLRTDPKFVWLIGDQE 226 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISI 300 I + Q ++ S + + S + L SDH P+ Sbjct: 227 DTTVKKSTSCAYDRI--VLCGQEIVNSVVPRSSGVFDFQKAYDLSEEEALDVSDHFPVEF 284 Query: 301 DY 302 Sbjct: 285 KL 286 >gi|254671628|emb|CBA09333.1| putative endonuclease [Neisseria meningitidis alpha153] Length = 259 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S N+N + + +Y ADIV +QE+ + A Sbjct: 2 LKIISANVNGIRSAYKKGFY---------------EYIATSGADIVCVQELKAQEADLSA 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 KN + ++ +AV K +G R Sbjct: 47 DMKNPHGMHGHWHCAEKRG--------YSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + ++ V+ ++L S + + + + + K Sbjct: 95 F-----VRCDFDRLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNEGR 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248 V+ GD+N + + + + Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGY 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY ++ + + ++ SDH P+ Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 251 Query: 300 IDYDF 304 ++YD+ Sbjct: 252 MEYDY 256 >gi|301167117|emb|CBW26696.1| hypothetical protein BMS_1876 [Bacteriovorax marinus SJ] Length = 254 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 38/270 (14%), Positives = 86/270 (31%), Gaps = 38/270 (14%) Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 ++D +L++ +D+ QE+ N T + + + Sbjct: 5 YSTDPIVLKKILSKNISDLNGFQEIVDTGFFKNFIHSNFKDHDVITSKCGGYG------N 58 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSF 167 + KK + ++ L + +G R +++ ++ + K WV +HLK+ Sbjct: 59 QKLSFVYNKKKFQHIRTEEDLAITGKNSCNSGVRPLLKINLKDFTSKKIFWVYLVHLKAG 118 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 S Q + ++ + +VI GDFN + + F K Sbjct: 119 S--------NSKDIQFRDTQLK----YLKSQLSPKNAYVIMGDFNTTQYFHSEGNYFHKF 166 Query: 228 IDPNDSLIRFPKEKDSRCNANKNL------RNKIPIDYFVMDQNAYKFLIQESFSEILY- 280 I + C++ +D+ ++ + + F+ + Sbjct: 167 IRD---AKLIASSSEIDCSSYWWGGINDGLYYPSLLDHILVTKELVGNFNRIDFTNTEHC 223 Query: 281 --------NEDDIKSRGKRLSDHCPISIDY 302 + ++ +SDHCPI + Sbjct: 224 AQNTCQIASLQELGQSYNSVSDHCPIRAEL 253 >gi|239627663|ref|ZP_04670694.1| exodeoxyribonuclease III [Clostridiales bacterium 1_7_47_FAA] gi|239517809|gb|EEQ57675.1| exodeoxyribonuclease III [Clostridiales bacterium 1_7_47FAA] Length = 311 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 37/333 (11%), Positives = 81/333 (24%), Gaps = 81/333 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L++ N ++L E+ + + + DI+ LQE+ A V Sbjct: 1 MKLMTLNTHSLEEEN-----------YEAKLHAFAEGVCRAEPDIIALQEVNQTQIAAPV 49 Query: 84 FPKNTWCIFYSTE----------------------------------------------R 97 K+ Y Sbjct: 50 DKKDLELYGYVPCAPCTPYAPHAQCASVSQCSVHPSPIPRTDNHAYRAARICAEHGRPYH 109 Query: 98 LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 + +A+ + + + + ++D + R+ + + + Sbjct: 110 WTWIGAKTGYGKYDEGLAILSRIPIAETKQFYITASQDYANWK-TRKILGIGIAAEHGME 168 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 + +H+ + D L+ + P + GDFN + Sbjct: 169 YFYTVHMGWWKDEDEPFEGQWERIRRELGDGACLETY-------PGPVWLMGDFNSPAHV 221 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-------PIDYFVMDQNAYKFL 270 G D + DS + + + IDY + Sbjct: 222 RGEGRDLIRGFGWLDSYELAGSKDSGITVGHAIDGWREQGDVSGMRIDYIWTSRK----- 276 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 S +SDH I ++Y+ Sbjct: 277 ----VPVRSSRVIFNGSYEPIVSDHYGIIVEYE 305 >gi|169829765|ref|YP_001699923.1| exodeoxyribonuclease [Lysinibacillus sphaericus C3-41] gi|168994253|gb|ACA41793.1| Exodeoxyribonuclease [Lysinibacillus sphaericus C3-41] Length = 251 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 87/303 (28%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N + G + ++AD +QE ++ Sbjct: 1 MKFISWNVNGIRACLGKGF---------------LDFFHQIEADFFCIQETKCQAGQVEL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ + + + A+ K+ + + G D S+ R Sbjct: 46 A-LDGYEQYWNYAQKKGY----------SGTAIFTKHTPLSVK----YGVGDEDSQDEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + ++++++ + + L+ Q L S Sbjct: 91 I-----ITLEYEDFYLVNVYTPNAQRDLARLPLRLTWEEHLASYLQDLN--------SKK 137 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V GD N + + + + + F + + + Sbjct: 138 PVVYCGDLNVAHTEIDLKNAKSNIGNSGFTYEERAKFSELLASGFVDSFRYKHPNETDHF 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ + + Q + + SDHCPI Sbjct: 198 TWWSYMNKVRERNIGWRIDYFIVSEQLKNQINQATIHPHI-----------MGSDHCPIE 246 Query: 300 IDY 302 + Sbjct: 247 LQL 249 >gi|295704797|ref|YP_003597872.1| exodeoxyribonuclease III [Bacillus megaterium DSM 319] gi|294802456|gb|ADF39522.1| exodeoxyribonuclease III [Bacillus megaterium DSM 319] Length = 253 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 83/304 (27%), Gaps = 79/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + Y + + AD+ +QE + Sbjct: 1 MKLISWNVNGIRACVRKGF---------------LDYFQEVTADVFCIQETKLQEGQIDL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + ++ AV K + +D Sbjct: 46 QLEGYYQYW-----------NYAVKKGYSGTAVFTKQKPLSVSFGVDKELEDEGR----- 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++ +V++++ + + L + L S Sbjct: 90 -----IITLEFEQCYVVNVYTPNSKRDLARLEERLQWEDDLLVYLKKLN--------SRK 136 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N + T+ + L F ++ A Sbjct: 137 AVILCGDLNVAHAEIDLRNPKPNRGNSGFTIEERGKMTTLLASGFLDTFRYLYPNQEGAY 196 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ + + + + + SDHCP+ Sbjct: 197 TWWSYMNKVRERNIGWRIDYFIVSERIKDVIQEAAIHPHV-----------MGSDHCPVM 245 Query: 300 IDYD 303 ++ + Sbjct: 246 LELN 249 >gi|254438485|ref|ZP_05051979.1| endonuclease/exonuclease/phosphatase family [Octadecabacter antarcticus 307] gi|198253931|gb|EDY78245.1| endonuclease/exonuclease/phosphatase family [Octadecabacter antarcticus 307] Length = 289 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 43/298 (14%), Positives = 85/298 (28%), Gaps = 42/298 (14%) Query: 15 PCTASVAQKVRLVSWNIN--TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 P A +R+ ++N++ L +G + +R L+ K LDAD++ Q Sbjct: 21 PVQAPKPNTLRIATYNVHYIWLGRSQGDWSVGDWERRKGP----LQTAFKTLDADVIGFQ 76 Query: 73 EMGSYNAVA-------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 EM S+ + + + + Sbjct: 77 EMESFGRGQAPANLTLDWLESQNLDYAAAAVGDPSTFPSTQPIFYRKDRLLLRDQGWFFF 136 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 P + +F+ + A E +G V ++H + S S Sbjct: 137 SDTPDVIYSRTFNGSWPAFASWAEFEGRDGTIFRVYNLHTEY------------RSRSNR 184 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A + I + + +P + GDFN ++ + + Sbjct: 185 RLSAALVAQRIAEPMQR-MPVFVIGDFN-----AIRGSATLGLLEDANVTFWPAQGSKFH 238 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N NL ID + ++ + G+ +DH P+ D+ Sbjct: 239 FNRGLNLFP--AIDRI----GGSERIVP----VGETFSVRGQFDGEWATDHYPVVGDF 286 >gi|182413315|ref|YP_001818381.1| exodeoxyribonuclease III Xth [Opitutus terrae PB90-1] gi|177840529|gb|ACB74781.1| exodeoxyribonuclease III Xth [Opitutus terrae PB90-1] Length = 253 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 36/302 (11%), Positives = 83/302 (27%), Gaps = 73/302 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N + Y +DAD++ LQE K Sbjct: 1 MKLVSWNVNGVRAVLKKGF---------------LDYMGKVDADVICLQE-------TKA 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P + + ++ + ++ A+ + + L D R Sbjct: 39 HPGDVQHVAWTAGYTP--HWYSAVKKGYSGTALFTRVAPLKVNFGIGLPGHDDEGR---- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ ++++++ + + + ++ + ++ Sbjct: 93 -----VITAEFADFFLVNVYQPNSQRGLTRLKYRTEEWDP------AFLAFLKKLEKKGK 141 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V GD N + + + + F + + + Sbjct: 142 PVVFCGDLNVAHQEIDLTNPKTNRRNAGFTDEERANFSKLLASGFVDTFREFEKGPGHYT 201 Query: 249 KNLRN--------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +DYFV + L + S SDHCP+ + Sbjct: 202 WWSQMMNCRARNIGWRVDYFVASEKLKPALKRAWI-----------SPEVMGSDHCPVGL 250 Query: 301 DY 302 + Sbjct: 251 EL 252 >gi|332359057|gb|EGJ36878.1| exodeoxyribonuclease [Streptococcus sanguinis SK49] Length = 275 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 85/305 (27%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q + +ADI+ +QE + Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLS------QAVLQTLQAENADIIAIQETKLSASGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K ++P +GA + G Sbjct: 55 KHLEILTNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E +G +V ++ + + + ++ L + Sbjct: 114 ---IITLEFDG--FFVTQVYTPNAGDGLKRLDDRQVWDAKYAEYLATL--------DEQK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F N Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 VMEIE 274 >gi|323351082|ref|ZP_08086739.1| exodeoxyribonuclease [Streptococcus sanguinis VMC66] gi|322122806|gb|EFX94515.1| exodeoxyribonuclease [Streptococcus sanguinis VMC66] gi|325687044|gb|EGD29067.1| exodeoxyribonuclease [Streptococcus sanguinis SK72] Length = 275 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 85/305 (27%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q + +AD++ +QE + Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLS------QAVLQTLQAENADVIAIQETKLSASGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K ++P +GA + G Sbjct: 55 KHLEILTNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E +G +V ++ + + + ++ L + Sbjct: 114 ---IITLEFDG--FFVTQVYTPNAGDGLKRLDDRQVWDAKYAEYLATL--------DEQK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F N Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 VMEIE 274 >gi|29833749|ref|NP_828383.1| hypothetical protein SAV_7207 [Streptomyces avermitilis MA-4680] gi|29610873|dbj|BAC74918.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 445 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 35/294 (11%), Positives = 80/294 (27%), Gaps = 36/294 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++++N+ L E + T + + DIV +QE +Y+A Sbjct: 31 GTFSVLTYNVAGLPESLSSASTPRDTSTTE-----IGRRIAPY--DIVNVQEDFNYHAYL 83 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + S + S + + A + + + + D + G Sbjct: 84 YSTDTHPYRTATS-----GGAGIGSGLNTVSTYAWDGDDFERAGWNSCQIDSGDCLTPKG 138 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 G + ++H + + + L +I + Sbjct: 139 --FTFMRERLAEGVYVDFYNLHTNAGTNDGDE--------ASRADNLDQLTSFIGTH-SN 187 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR-FPKEKDSRCNAN----------KN 250 V+ GD N + + + + + + + Sbjct: 188 GNAVVVMGDTNTRYTRSADTIAEFAAANGLTDAWVKLIRGGAAPAKGSDALVCDQTGATV 247 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +D + + L S+ + S G LSDH PI+ + + Sbjct: 248 PNTCEVVDKILYRGSKLVTLDATSYDNEHA--AFLNSDGLMLSDHDPITAAFSW 299 >gi|291450703|ref|ZP_06590093.1| large secreted protein [Streptomyces albus J1074] gi|291353652|gb|EFE80554.1| large secreted protein [Streptomyces albus J1074] Length = 606 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 29/332 (8%), Positives = 77/332 (23%), Gaps = 71/332 (21%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA--KNLDADIVFLQEMG 75 A ++ + ++N+ L + + L + D++ L+E+ Sbjct: 297 AQAKNELAVATYNVENLDPGDP-----------QEKFDALARAVVTNLASPDVLALEEIQ 345 Query: 76 SYNAVAK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 N + + + + +I A Sbjct: 346 DDNGPTDDGTVSADETLRRFTEAITAAGGPRYDW-RGIDPVDKADGGEPGGNIRQAFLFN 404 Query: 118 KKNVRVLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKK 156 V + P + +R+ + G++ Sbjct: 405 PARVSFTDRPGGDATTATGVVRERGGAALTHSPGRVDPADPAWQNSRKPLAGEFTFRGER 464 Query: 157 IWVLDIHLKSFCFL----DSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGD 210 ++++ H S + S + QA + ++ + + ++ GD Sbjct: 465 VFLIANHFASKGGDEPLAGHRQPPTRSSETQRHAQAASVNTFVKKLLSADRKAKVLVLGD 524 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 N + + N +D ++ F Sbjct: 525 INDFEFSAT----TQTLTAGKALKPAALSLPPAERYSYVFQGNSQILDQILVTPAVKHFH 580 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + SDH P + + Sbjct: 581 YDSVHINAEFADQN--------SDHDPQVLRF 604 >gi|239978820|ref|ZP_04701344.1| large secreted protein [Streptomyces albus J1074] Length = 618 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 29/332 (8%), Positives = 77/332 (23%), Gaps = 71/332 (21%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA--KNLDADIVFLQEMG 75 A ++ + ++N+ L + + L + D++ L+E+ Sbjct: 309 AQAKNELAVATYNVENLDPGDP-----------QEKFDALARAVVTNLASPDVLALEEIQ 357 Query: 76 SYNAVAK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 N + + + + +I A Sbjct: 358 DDNGPTDDGTVSADETLRRFTEAITAAGGPRYDW-RGIDPVDKADGGEPGGNIRQAFLFN 416 Query: 118 KKNVRVLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKK 156 V + P + +R+ + G++ Sbjct: 417 PARVSFTDRPGGDATTATGVVRERGGAALTHSPGRVDPADPAWQNSRKPLAGEFTFRGER 476 Query: 157 IWVLDIHLKSFCFL----DSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGD 210 ++++ H S + S + QA + ++ + + ++ GD Sbjct: 477 VFLIANHFASKGGDEPLAGHRQPPTRSSETQRHAQAASVNTFVKKLLSADRKAKVLVLGD 536 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 N + + N +D ++ F Sbjct: 537 INDFEFSAT----TQTLTAGKALKPAALSLPPAERYSYVFQGNSQILDQILVTPAVKHFH 592 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + SDH P + + Sbjct: 593 YDSVHINAEFADQN--------SDHDPQVLRF 616 >gi|184159856|ref|YP_001848195.1| exonuclease III [Acinetobacter baumannii ACICU] gi|213159082|ref|YP_002321080.1| exodeoxyribonuclease III [Acinetobacter baumannii AB0057] gi|215481899|ref|YP_002324081.1| exodeoxyribonuclease III [Acinetobacter baumannii AB307-0294] gi|239503819|ref|ZP_04663129.1| catabolite repression control protein [Acinetobacter baumannii AB900] gi|301347005|ref|ZP_07227746.1| catabolite repression control protein [Acinetobacter baumannii AB056] gi|301510728|ref|ZP_07235965.1| catabolite repression control protein [Acinetobacter baumannii AB058] gi|301597923|ref|ZP_07242931.1| catabolite repression control protein [Acinetobacter baumannii AB059] gi|332850148|ref|ZP_08432535.1| exodeoxyribonuclease III [Acinetobacter baumannii 6013150] gi|332868976|ref|ZP_08438535.1| exodeoxyribonuclease III [Acinetobacter baumannii 6013113] gi|332872852|ref|ZP_08440817.1| exodeoxyribonuclease III [Acinetobacter baumannii 6014059] gi|183211450|gb|ACC58848.1| Exonuclease III [Acinetobacter baumannii ACICU] gi|193078676|gb|ABO13730.2| catabolite repression control protein [Acinetobacter baumannii ATCC 17978] gi|213058242|gb|ACJ43144.1| exodeoxyribonuclease III [Acinetobacter baumannii AB0057] gi|213986663|gb|ACJ56962.1| exodeoxyribonuclease III [Acinetobacter baumannii AB307-0294] gi|322509770|gb|ADX05224.1| exonuclease III [Acinetobacter baumannii 1656-2] gi|323519783|gb|ADX94164.1| catabolite repression control protein [Acinetobacter baumannii TCDC-AB0715] gi|332730997|gb|EGJ62303.1| exodeoxyribonuclease III [Acinetobacter baumannii 6013150] gi|332733019|gb|EGJ64221.1| exodeoxyribonuclease III [Acinetobacter baumannii 6013113] gi|332739013|gb|EGJ69875.1| exodeoxyribonuclease III [Acinetobacter baumannii 6014059] Length = 274 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 82/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +R+VS N+N L L ++ + DAD+V +QE ++ + Sbjct: 14 LRVVSINVNGLRSSVTKG---------------LLEWLEQSDADVVCMQESRITHEQWTE 58 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 F W ++ A+ + V + DS R Sbjct: 59 KFRPEGWHTHLFPAERAGYA----------GTAIYSRLPFVSIKDGLGFELADSQGRF-- 106 Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++ + + ++L S + + + + Q ++ Sbjct: 107 ---ISAEFDLGLSHPVHIASLYLPSGSSGE-------EAQARKDLFLGEYAKILKQWRDE 156 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 +I GD+N + + + I + + + Sbjct: 157 NKSIIICGDYNIVHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDELGYVDTFRVVRTEAE 216 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + + + + SDH P Sbjct: 217 LYSWWSNRGQARAKNVGWRIDYHACSPDWKARTVNAWV-----------YKDQWFSDHAP 265 Query: 298 ISIDY 302 + IDY Sbjct: 266 VIIDY 270 >gi|315920604|ref|ZP_07916844.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D2] gi|313694479|gb|EFS31314.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D2] Length = 341 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 40/343 (11%), Positives = 92/343 (26%), Gaps = 59/343 (17%) Query: 2 IRKYVLALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKN----------- 45 ++K ++ L + + Q+ + +N+ L + + Sbjct: 1 MKKSLMTLGVLALFVLMAYGQEKKFALYSVAFYNMENLFDTIHDEGKNDYEYLPNGTNQW 60 Query: 46 SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + + + + + L D I+ + E+ +Y + + + Sbjct: 61 NTMKYKAKLKNMSEILSLLSTDKLPMGPAIIGVSEIENYRVLEDILKQP---ALADRGYQ 117 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 H + + + A K + + + + R + I G+K+ Sbjct: 118 YVHYEGEDQRGVDCAFFYNPKLFELTNSKL-VPYVYINDTIHKTRGFLIASGNIAGEKMH 176 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 + H S SP+ +Q + +KD + +++S VI GD N Sbjct: 177 FIVNHWPSR-------AAASPARERAGEQVRAIKDSL-LREDSAAKIVIMGDMNDDPMDK 228 Query: 219 GNNDDFWKT-----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLI 271 + P D + D V N Sbjct: 229 SMAVALGAKRKPADVGPTDLYNPWWDTLKKGYGTLMYKGKWNLFDQIVFTGNLLGTDRST 288 Query: 272 QESFSEILYNEDDIKSRGKR-----------------LSDHCP 297 + + ++ D + + + SDH P Sbjct: 289 LKFYKHEIFRRDFMFQKEGKYKGYPKRTQAGGVWLNGYSDHLP 331 >gi|297846512|ref|XP_002891137.1| hypothetical protein ARALYDRAFT_313975 [Arabidopsis lyrata subsp. lyrata] gi|297336979|gb|EFH67396.1| hypothetical protein ARALYDRAFT_313975 [Arabidopsis lyrata subsp. lyrata] Length = 290 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 32/275 (11%), Positives = 69/275 (25%), Gaps = 24/275 (8%) Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSY-NAVAKVFPKNTWC-IFYSTERLINHSKRDSN 107 + + KN +AD + LQE+ Y + + + + I++ Sbjct: 12 WDNRSKAILDNLKNFEADFICLQEVDEYISFFDRNMEAHGYTGIYFPRGEGYKRDGCAIF 71 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR-------RAVELLVEINGKKIWVL 160 A + V + A A ++ + + ++ Sbjct: 72 FKPKFAELITYNIVDYNNLAERRCVASTIHGDAVSKLKCDCIGILAAFKILKPFNHVVII 131 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 D ++ L + K I+ + ++AGDFN + Sbjct: 132 ATTHLKSGKSDEWDDVKLAQAKSLMFELAMFKRTISAVENCSPSVILAGDFNSNPSSDVY 191 Query: 221 ND-------DFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQNAYK 268 W + +DY + Sbjct: 192 EYVNSDNIPVMWPLGGEEEETEFGLCSAYGFTKGEPKFTKYVPGFAETLDYVFFTPS--D 249 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ + + D SDH PI ++++ Sbjct: 250 FISPVKLLDSP-DVVDFLPNKSHPSDHLPIGVEFE 283 >gi|269103989|ref|ZP_06156686.1| hypothetical extracellular nuclease [Photobacterium damselae subsp. damselae CIP 102761] gi|268163887|gb|EEZ42383.1| hypothetical extracellular nuclease [Photobacterium damselae subsp. damselae CIP 102761] Length = 781 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 43/384 (11%), Positives = 98/384 (25%), Gaps = 106/384 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWK-----------------NSVKRTTSDY----TLLRQYAK 62 +++ S+N+ N +T +D+ T + Sbjct: 303 LKVASFNVLNFFTSASSIGGDLNVTCQDQADADASKGCNRGAKTEADFVLQRTKIVNALT 362 Query: 63 NLDADIVFLQEMGSY-----NAVAKVFPKN---------TWCIFYSTERLINHSKRDSNN 108 +DADIV + EM + +A+A + + + N + ++ Sbjct: 363 AMDADIVGIMEMENNGFGDNSAIANLVEHLNAQWSDTSQHYRFIEIAAKDKNQGQYFGSD 422 Query: 109 DIHTAIAVR----KKNVRVLQQSYPL-------LGAKDSFSRAGNRRAVELLVEING--- 154 I A+ R P ++ R ++ +N Sbjct: 423 AIMVAMLYRPAKVTPKGDAEVIRMPEQHIVGTSPEGEEKQLDKYQRDSLLQSFTVNHAKQ 482 Query: 155 --KKIWVLDIHLK-----------SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 K + ++ HLK + F + + AQ L + + + K Sbjct: 483 KQKTLTIVVNHLKSKGSGCYEDWVNGEFDSDPADLQRRCNAFRVSAAQVLANSLKKVKGD 542 Query: 202 LVPFVIAGDFNRKINYLG---------------------------NNDDFWKTIDPN-DS 233 ++ GD N + + Sbjct: 543 ---LLVIGDMNSYGMEDPIRVLTNYKPNQAQRKIMTASGTSIAGVPYQAVGQEVGKGLGL 599 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-- 291 + + +D+ + +++ K ++ I E+ + ++ Sbjct: 600 KNLATQWHGKDSYSYSFGGELGSLDHALANKSLAKKVVGIEDWHINSVENALFEYSRKYS 659 Query: 292 -----------LSDHCPISIDYDF 304 SDH P+ I + Sbjct: 660 GELAKSEGPYSASDHDPVIISLHY 683 >gi|163856676|ref|YP_001630974.1| hypothetical protein Bpet2363 [Bordetella petrii DSM 12804] gi|163260404|emb|CAP42706.1| conserved hypothetical protein [Bordetella petrii] Length = 266 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 34/287 (11%), Positives = 77/287 (26%), Gaps = 50/287 (17%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYN 78 ++L++ N++ L+ ++ DIVFLQE+ + Sbjct: 21 GTTIKLLTVNVHKGFTLFNRRF----------ILHELKAALRDAGPDIVFLQEVIGTHHR 70 Query: 79 AVAKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 ++ + S + + + AV + V Q++ + Sbjct: 71 HARRLAAWPATSQYEFLADSLWSDFAYGRNAVYPEGDHGNAVLSRWPIVTHQNHDV---- 126 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 S +R ++ V + + + + Q L Sbjct: 127 -SVDNHESRGMLQCTVRHPDLAGDMHAVCVHLGLR-----------EAHRRAQLGQLCAL 174 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + Q+ P ++ GDFN + F + Sbjct: 175 V-QRLGDDAPVLVGGDFNDWRRRASP------LLAACRLHDVFRRALGREPRTFPARWPL 227 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + +D + A + + + LSDH P++ + Sbjct: 228 LALDRIYVRDVAAARPVPLASRV-----------WRHLSDHAPLAAE 263 >gi|331082708|ref|ZP_08331831.1| hypothetical protein HMPREF0992_00755 [Lachnospiraceae bacterium 6_1_63FAA] gi|330400327|gb|EGG79969.1| hypothetical protein HMPREF0992_00755 [Lachnospiraceae bacterium 6_1_63FAA] Length = 354 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 44/326 (13%), Positives = 100/326 (30%), Gaps = 64/326 (19%) Query: 17 TASVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 T S+ +R++++NI G + +S ++ ++ + + AD+ Sbjct: 50 TLSLDDSLRIITYNIGYAGLDKSEDFFMDGGSEVQPDSKEQVETNLKGIEKVLTENPADV 109 Query: 69 VFLQEMGSYNAVAKVFPKNTW---------------CIFYSTERLINHSKRDSNNDIHTA 113 FLQE+ + + + + + L K +S T Sbjct: 110 YFLQEVDKDSKRSFHIDETEYLKSSLNMEGIFAYNFKCDFVPYPLPPIEKVNSGIFTMTD 169 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 + V L +S+ + R + +E ++ +++ HL+++ D Sbjct: 170 LKVNSAARLALPESFSWPVKTCNLKRCMQE--TRIPLEGTDAELVLINFHLEAYDDGDGK 227 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------RKINYLGNNDDFWKT 227 Q++ L + ++++ E+ + GDFN K + Sbjct: 228 IA-----------QSKMLAEKLSKEYEAGNYVIAGGDFNQTFEGMDKYPITNTENWVPGI 276 Query: 228 IDPN---DSLIRFPKEKDSRCNANKNLRNKIP-------IDYFVMDQNAYKFLIQESFSE 277 I + + + C ID F++ N I ++ Sbjct: 277 IGQDTLPEHFSFAVDDTYPTCRLLNAPYTGSYETSQVYVIDGFIVSDNITVSDISVINTD 336 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 Y DH P+ ++ Sbjct: 337 FEYT------------DHQPVQMEIS 350 >gi|307243437|ref|ZP_07525593.1| exodeoxyribonuclease III [Peptostreptococcus stomatis DSM 17678] gi|306493161|gb|EFM65158.1| exodeoxyribonuclease III [Peptostreptococcus stomatis DSM 17678] Length = 275 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 87/305 (28%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + R + + +DADI+ LQE Sbjct: 1 MKLISWNIDSLNAALTSDSARALLSRD------VLKNLAGMDADIIALQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 +S + S + + K ++ +YP +GA + R Sbjct: 55 KHIECLEEIFSDYDHVWRSSVEPARKGYAGTMFLYKKGMDVKATYPEIGAP-CTMDSEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +V ++ + + + + L Sbjct: 114 I-----ITLELDSCYVTQVYTPNAGDGLKRLDDRQAWDKKYADYLEGLAKH--------K 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + + + F + Sbjct: 161 PVLACGDYNVAHKEIDLANPASNHRSPGFTDEEREGFTNLLARGFVDTFRQVHGDVEEVY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY+++ Q+ + + + DH PI Sbjct: 221 SWWAQRVKTSKVNNTGWRIDYWIVSQDVADKVRVSEMVDSGERQ-----------DHAPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 LLEVE 274 >gi|148697887|gb|EDL29834.1| deoxyribonuclease 1-like 1, isoform CRA_b [Mus musculus] Length = 321 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 77/303 (25%), Gaps = 33/303 (10%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +R V+A + L+ + R+ ++N + L+ + S L Q Sbjct: 26 MRGLVMAPLLILLVGGT---EAFRICAFNAHRLTL---------AKLTKESVMDTLVQIL 73 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 DI+ LQE+ + F S L + S R Sbjct: 74 ARC--DIMVLQEVVDSSQNTVPFLLQKLKSSRSYSFLNSSLLGRSTYKEKYVYIYRSDKT 131 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPS 180 +VL + R + K + V+ + L + E Sbjct: 132 QVLN-----FYQYNDTDDIFAREPFVAHFTLPSKTLPSVVLVPLHTTPKDVEKELNALYD 186 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 L Q ++ GDFN L + + Sbjct: 187 VFLDVYQRWQ-----------NENVILLGDFNADCASLTKKRLKSLLLRTKAGFHWVIPD 235 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + I V Q L + + + R+SDH P+ + Sbjct: 236 GEDTTVRASTNCTYDRI--VVHGQGCQMLLKAAATFDFPKRFQLTEEEALRISDHYPVEV 293 Query: 301 DYD 303 + Sbjct: 294 ELS 296 >gi|15892269|ref|NP_359983.1| exodeoxyribonuclease III [Rickettsia conorii str. Malish 7] gi|15619409|gb|AAL02884.1| exodeoxyribonuclease III [Rickettsia conorii str. Malish 7] Length = 286 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 79/306 (25%), Gaps = 72/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V+WNIN+L LLR+ A DI+ LQE +++ Sbjct: 16 MKIVTWNINSL----------------RLRIDLLRKLAYEHQPDIILLQETKVADSL--- 56 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + S + +A+ K S L + R Sbjct: 57 ------FPLEVIKNIGYEHVIYSGQKSYNGVAIISKFPLNNVFSLELYNSDK-------R 103 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ +I +V D + + + + +++W+T + Sbjct: 104 HIAAIVNDIEIHNFYV-------PAGGDIPDIEVNTKFKHKLEYVRLMQEWLTTNRTKND 156 Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 +I GD N + + + + Sbjct: 157 KMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSLLVELQNALGFIDSSRHFVSLDEKF 216 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + N L + SDH P Sbjct: 217 YTWWSYRNIDWKKSNRGRRLDHIWVSDNLKGAL-------FSMHLLSEARDWSSPSDHVP 269 Query: 298 ISIDYD 303 + ++ Sbjct: 270 YFVTFN 275 >gi|113983|sp|P23196|APEX1_BOVIN RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName: Full=APEX nuclease; Short=APEN; AltName: Full=Apurinic-apyrimidinic endonuclease 1; Short=AP endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox factor-1; Contains: RecName: Full=DNA-(apurinic or apyrimidinic site) lyase, mitochondrial gi|118|emb|CAA40014.1| BAP 1 [Bos taurus] Length = 318 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 78/311 (25%), Gaps = 74/311 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + + +++ SWN++ L + K DI+ LQE Sbjct: 53 TSPSGKSATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 K+ + S + S+ + ++ + + + + G Sbjct: 98 KCSE--NKLPVELQELSGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R V ++ ++ + + + L Sbjct: 148 EEEHDQEGRVIVA-----EYDAFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238 S P V+ GD N + + F + + F Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLTDSFR 254 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A +DYF++ Q+ + D Sbjct: 255 HLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSQS-----------VLPALCDSKIRSK 303 Query: 290 KRLSDHCPISI 300 SDHCPI++ Sbjct: 304 ALGSDHCPITL 314 >gi|301060638|ref|ZP_07201465.1| endonuclease/exonuclease/phosphatase family protein [delta proteobacterium NaphS2] gi|300445250|gb|EFK09188.1| endonuclease/exonuclease/phosphatase family protein [delta proteobacterium NaphS2] Length = 293 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 81/322 (25%), Gaps = 74/322 (22%) Query: 6 VLALVFFLVPCTASV---------AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 +L V + V + ++++NI L + V +V R Sbjct: 21 LLIAVALALFLFGPVYGKLDRGNNGASLSVMTYNIWDLGGKRPVLKNVEAVVRGAGI--- 77 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 D++ LQE+ A + + H + +++ Sbjct: 78 ---------PDVLLLQEVRGEKMAASLAGSLGF----------PHHLYRAARGHGYGVSI 118 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + + + + R + V G+K+ + +HL +D + Sbjct: 119 LSRYPLIESGFFYFKSS------KSGRGVLGATVVFEGRKLRLCSVHLDRIDSIDVDQQG 172 Query: 177 YSPSCSL--------------LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 S S+ + L W +I GDFN Sbjct: 173 AHLSWDEAVSLLAHETTNETVRSRCVKELLAW-----AGSDRVIIGGDFNTIFCS----K 223 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 K + + + + L +D+ + L E Sbjct: 224 AVRKMETVFEDALAGTSDYLTGTYTKSGLPVAPRLDFLFYSKELAC-LKAHVVRESAG-- 280 Query: 283 DDIKSRGKRLSDHCPISIDYDF 304 DH P+ + F Sbjct: 281 -----------DHYPVKAVFSF 291 >gi|227541681|ref|ZP_03971730.1| endonuclease/exonuclease/phosphatase [Corynebacterium glucuronolyticum ATCC 51866] gi|227182649|gb|EEI63621.1| endonuclease/exonuclease/phosphatase [Corynebacterium glucuronolyticum ATCC 51866] Length = 880 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 46/344 (13%), Positives = 100/344 (29%), Gaps = 75/344 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWK----------------------NSVKRTTSDYTLLRQY 60 ++ L S+N+ G + S + T + Sbjct: 474 ELSLASFNVLNYFTTLGETEEGCKAYTDREGNNVTANWCTVRGAWSTQAFTRQQAKIVNA 533 Query: 61 AKNLDADIVFLQEMGS-----------YNAVAKVFP-----------KNTWCIFYSTERL 98 L+ ++ L+E+ + A++K+ + TW + S E++ Sbjct: 534 INTLNVSVLGLEEIENTASVTGDASRRDEALSKLVAALNADLTARGKEPTWELVASPEKV 593 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 + I A K V + S + + V + Sbjct: 594 PGRE-----DVIRVAFIYNKTKVAPVGPSVIIDDPAYTGVARQPLGQAFARVGQKDPEFV 648 Query: 159 VLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNR 213 + H KS + + + + +L ++QA+ L I +E + +P + GD N Sbjct: 649 AVVNHFKSKGSVARGDKDQNDGQGNNPNLRAEQARALTKAIAAHEEWNDMPVFVVGDLNS 708 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273 K ++ ++ + +D+ + A K ++ Sbjct: 709 YTKED-----TMKVLEDAGYTNIA--ATYDSGHSYQFAGRIGSLDHAFGNAAAMKLVVDA 761 Query: 274 SFSEILYNEDDIKSRGK--------------RLSDHCPISIDYD 303 +I +E + R SDH PI + ++ Sbjct: 762 DVWDINSDESIAFEYSRENYNIAPLVDDSVFRSSDHDPIKVAFN 805 >gi|227487151|ref|ZP_03917467.1| endonuclease/exonuclease/phosphatase [Corynebacterium glucuronolyticum ATCC 51867] gi|227092809|gb|EEI28121.1| endonuclease/exonuclease/phosphatase [Corynebacterium glucuronolyticum ATCC 51867] Length = 880 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 46/344 (13%), Positives = 100/344 (29%), Gaps = 75/344 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWK----------------------NSVKRTTSDYTLLRQY 60 ++ L S+N+ G + S + T + Sbjct: 474 ELSLASFNVLNYFTTLGETEEGCKAYTDREGNNVTANWCTVRGAWSTQAFTRQQAKIVNA 533 Query: 61 AKNLDADIVFLQEMGS-----------YNAVAKVFP-----------KNTWCIFYSTERL 98 L+ ++ L+E+ + A++K+ + TW + S E++ Sbjct: 534 INTLNVSVLGLEEIENTASVTGDASRRDEALSKLVAALNADLTARGKEPTWELVASPEKV 593 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 + I A K V + S + + V + Sbjct: 594 PGRE-----DVIRVAFIYNKTKVAPVGPSVIIDDPAYTGVARQPLGQAFARVGQKDPEFV 648 Query: 159 VLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNR 213 + H KS + + + + +L ++QA+ L I +E + +P + GD N Sbjct: 649 AVVNHFKSKGSVARGDKDQNDGQGNNPNLRAEQARALTKAIAAHEEWNDMPVFVVGDLNS 708 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273 K ++ ++ + +D+ + A K ++ Sbjct: 709 YTKED-----TMKVLEDAGYTNIA--ATYDSGHSYQFAGRIGSLDHAFGNAAAMKLVVDA 761 Query: 274 SFSEILYNEDDIKSRGK--------------RLSDHCPISIDYD 303 +I +E + R SDH PI + ++ Sbjct: 762 DVWDINSDESIAFEYSRENYNIAPLVDDSVFRSSDHDPIKVAFN 805 >gi|12322547|gb|AAG51276.1|AC027135_17 hypothetical protein [Arabidopsis thaliana] gi|12597833|gb|AAG60143.1|AC074360_8 hypothetical protein [Arabidopsis thaliana] Length = 335 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 77/311 (24%), Gaps = 58/311 (18%) Query: 49 RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108 R + + KNL AD LQE+ Y++ + + +R + Sbjct: 23 RWKARSHAILSVLKNLQADFFCLQEVDEYDSFYRNNMDSLGYSGIYIQRTGQRKRDGCAI 82 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR------------------------ 144 + A R+ DS S + + Sbjct: 83 FYKPSCAELVTKERIEYNDLVDSIKADSVSCSEQKIETSNEGKGDEKAKDKFVLLEEKKA 142 Query: 145 ------------------AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 + IN ++ + + L + L Sbjct: 143 NTFRDLNDPLVRLKRDCVGIMAAFRINKPFQHIVIVANTHLYWDPELADVKLAQAKYLLS 202 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINY----------LGNNDDFWKTIDPNDSLIR 236 + K I+ + E ++AGDFN + + P Sbjct: 203 RLAQFKTLISDEFECTPSLLLAGDFNSIPGDMVYSYLVSGNAKPTETIEEEEAPVPLSSV 262 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY----NEDDIKSRGKRL 292 + + N +DY + + F+ S ++ + Sbjct: 263 YEVTRGEPKFTNCTPGFTNTLDYIFISPS--DFIKPVSILQLPEPDSPDVVGFLPNHHHP 320 Query: 293 SDHCPISIDYD 303 SDH PI +++ Sbjct: 321 SDHLPIGAEFE 331 >gi|325096045|gb|EGC49355.1| endonuclease/exonuclease/phosphatase [Ajellomyces capsulatus H88] Length = 330 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 85/303 (28%), Gaps = 28/303 (9%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +RL+++N+ ++ G K +R + T + D V +QE+ Sbjct: 36 PFPNKSLSLRLMTFNVRYAAKPSGN--EKAWSERRGNLITQVAYEMGATDNVFVGMQEVL 93 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSN--NDIHTAIAVRKKNVRVLQQSYPL--- 130 V N+ + RD + ++ I RK +++ Sbjct: 94 HNQLEDIVNGLNSHPSSGGNDWAYIGVGRDDGKQSGEYSPILYRKSLWELVEMDTKWLSE 153 Query: 131 -LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 A NRR V + V N + + + ++ Sbjct: 154 TPDVPSYGWGATNRRIVTIGVFRNKRTKAMALVMNTHL---------DHQVSEARLHGSE 204 Query: 190 WLKDWITQKKESLVP------FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + I + K ++ GDFN + I + K Sbjct: 205 LILKLIGEYKNKRQYKCKLTGVILTGDFNSEEGQEAYKVVTESKILVDPVKKFGDKNIYG 264 Query: 244 RCNANKNLRN---KIPIDYFVMD-QNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPI 298 + IDY + N + + ++ Y + G SDH + Sbjct: 265 NRKTFTGFDSEVGLTRIDYVFVGQGNLCGWGDKGTWDVNRYAVLPNKFDDGIFFSDHRAV 324 Query: 299 SID 301 D Sbjct: 325 VAD 327 >gi|295136350|ref|YP_003587026.1| exodeoxyribonuclease [Zunongwangia profunda SM-A87] gi|294984365|gb|ADF54830.1| exodeoxyribonuclease [Zunongwangia profunda SM-A87] Length = 253 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 86/303 (28%), Gaps = 73/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R++S+N+N + + + + + D+V LQE+ K Sbjct: 1 MRIISYNVNGIRA---------------AIRKGFLDWIQQANPDVVCLQEI-------KA 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P ++ + ++ +A+ K ++ G + R Sbjct: 39 QPDQLNLEEFTDAGYPYQYWYPAKKKGYSGVAILSKTEP----NHVEYGTGIDYMDDEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V+ ++L S Q + +I K+ + Sbjct: 95 N-----IRADFGDFSVMSLYLPSGT--------NINRLEHKLQYMDDFQQYIDSLKQQIP 141 Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249 +I GD+N + +D W I + + + Sbjct: 142 NLIICGDYNICHEAIDIHDPVRLKNVSGFLPVEREWIDNFMKSGFIDSFRYFNDEPDQYS 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY ++ + L + Y+ SDHCPI + Sbjct: 202 WWSYRANARANNKGWRIDYNLVAAPLQEKLKRAVILPEAYH-----------SDHCPILV 250 Query: 301 DYD 303 + + Sbjct: 251 ELE 253 >gi|254384957|ref|ZP_05000292.1| exodeoxyribonuclease [Streptomyces sp. Mg1] gi|194343837|gb|EDX24803.1| exodeoxyribonuclease [Streptomyces sp. Mg1] Length = 268 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 71/271 (26%), Gaps = 56/271 (20%) Query: 60 YAKNLDADIVFLQEMGSYNA--VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + DAD+V LQE+ + A + W ++ + +AV Sbjct: 24 WLAGSDADVVCLQEVRAEEAQIPDEARVPEGWHTVFAP----------AAAKGRAGVAVY 73 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + + D+ R L V++ G + V ++L S ++ Sbjct: 74 TRREPERVRVGFGSEEFDTSGR-------YLEVDLPG--VTVASLYLPSGEAGTEKQDEK 124 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGNN 221 + L++ V+ GD+N Sbjct: 125 YRFMGEFLTYLEGLRERA---AAEGREVVVCGDWNICHREADLKNWKTNRKNAGFLPEER 181 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQ 272 + D + + ID V ++ Sbjct: 182 AWLGEVYDRAGYVDVVRALHPDTEGPYSWWSYRGRAFDNDAGWRIDLQVATPGLAARAVK 241 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ++ +R SDH P+++ Y+ Sbjct: 242 AFV-------ERAETHPERWSDHAPVTVVYE 265 >gi|330501089|ref|YP_004377958.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina NK-01] gi|328915375|gb|AEB56206.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina NK-01] Length = 290 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 31/294 (10%), Positives = 82/294 (27%), Gaps = 62/294 (21%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 +RL+S+N+ + + + ++ + D D+V L Sbjct: 29 PADGLLRLLSFNVQVGINTQRYHHYLTRSWQHLLPHAGRANNLQRIADLLA--DFDLVAL 86 Query: 72 QEMGSYNAVAKVFPKNTW---CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 QE+ + + + + + + + R + + Sbjct: 87 QEVDGGSLRSGYVNQVEYLAQQGAFPYWYQQLNRNLGRFAQHSNGVLSRLRPTLLEDHPL 146 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 P R A+ L + + + V+ +HL ++Q Sbjct: 147 PGPPG---------RGAIFLRLGEGEQALGVVMMHLALG-------------ARTRTRQL 184 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++++ +++ V+ GD N + N L Sbjct: 185 AYIRERVSEF----RHLVLMGDMNTHAVD----------LLENSPLRDLGLLAPQVEATF 230 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + R + +D+ ++ + + +SDH P++++ Sbjct: 231 PSWRPQRCLDHILLSSELELGRVDV--------------LSQPISDHLPVAVEI 270 >gi|288800678|ref|ZP_06406135.1| endonuclease/exonuclease/phosphatase [Prevotella sp. oral taxon 299 str. F0039] gi|288332139|gb|EFC70620.1| endonuclease/exonuclease/phosphatase [Prevotella sp. oral taxon 299 str. F0039] Length = 270 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 92/303 (30%), Gaps = 80/303 (26%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 K++++++NI + V+ + + ++ +ADI+ L E+ + + Sbjct: 20 FAQDKIKVITFNIRSFEPDFDVAPY--------------AELLRSEEADIICLNEVENRS 65 Query: 79 AVAK------------VFPKNTWCIFYSTERLINHSKRDSNNDIHT------AIAVRKKN 120 + + N + IF + L N + A+ + Sbjct: 66 SRQQRDGKFRDVVAELAQKLNMFEIFGYSYNLANKRGEYPEENYRYSLNELYGNAILSRY 125 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSP 179 + L K S A R V + + KK + HL Sbjct: 126 PILNSNCLQLPRPKGS---ADQRGVVYADILLPTKKMFRIASTHLDHMGG---------- 172 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND---DFWKTIDPNDSLIR 236 +QA+ L + S +P ++ GD N+ N F + + N + + Sbjct: 173 ----QLEQAEVLVS--DKVYTSSIPMILTGDMNQGPGSSVINKIETAFERMDNDNGTYLG 226 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 K ID+ + + F D GK LSDHC Sbjct: 227 LSK-----------------IDFIFGSKGKWTF--------ESCRVLDRFFNGKELSDHC 261 Query: 297 PIS 299 P+ Sbjct: 262 PVV 264 >gi|224372849|ref|YP_002607221.1| exodeoxyribonuclease III [Nautilia profundicola AmH] gi|223588651|gb|ACM92387.1| exodeoxyribonuclease III [Nautilia profundicola AmH] Length = 250 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 77/303 (25%), Gaps = 77/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++N+N S +++ K D D++ +QE+ Sbjct: 1 MRICTFNVN----------------SIRSRLEIVQNLIKEYDIDVLCMQEIKVEED---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +AV + Q R Sbjct: 41 ---------KFPKIDEEYECVIHGQKKLNGVAVCSRIPIEKYQK------GFEGELEEAR 85 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 L+ +I ++++++ + Y L +++++ S Sbjct: 86 FIYSLI-----DEIHIINVYVPLG-------DNYGERFEYKIYFYNKLFEFLSRFDLSKD 133 Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GD N + L I + +E + Sbjct: 134 KVVLCGDMNVAYSDLDVWDPEIWEGEVTFLPEEKAMINNILNMGFVDVI-REFNKNERVY 192 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + +DY + K + + R SDH PI Sbjct: 193 TFYDYRGAKVYKNEGMRLDYVFLSPTLAKEVKNVEIL-----TSVRRKRKPTPSDHVPII 247 Query: 300 IDY 302 ++ Sbjct: 248 VEL 250 >gi|312087189|ref|XP_003145373.1| hypothetical protein LOAG_09798 [Loa loa] gi|307759462|gb|EFO18696.1| hypothetical protein LOAG_09798 [Loa loa] Length = 293 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 34/311 (10%), Positives = 81/311 (26%), Gaps = 56/311 (18%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 +++N L+ + + ++ K ++ D+V LQE+ + + Sbjct: 1 MTFNT-WLTGNN-----------VENGLAKIAKHIKRINPDVVALQEINDIKRLQHL--- 45 Query: 87 NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146 + + + + + TAI + K + NR Sbjct: 46 ------ITEMGKGWVTAKSTYSYTDTAILTKHKLINRSFHQVSHGMGVKIEIENTNRTIN 99 Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL--KDWITQKKESL-- 202 + ++ + K + Q + L D+ E+ Sbjct: 100 IWSLHLDYQSYGPYAAFNKMVTKASQIMAGEIVDGKGRFQNMRELLVDDYFQAAIENSSI 159 Query: 203 VPFVIAGDFNRKINYLGNN-------DDFWKT-----------------------IDPND 232 P ++ GDFN + N D ++ +D Sbjct: 160 EPLIVCGDFNSPSHLDWTNQTSFLHGDWKFQWPATHMLQNEAGMKDSYRELHPQVLDNPG 219 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD-IKSRGKR 291 ++ S + + IDY + + ++ + + Sbjct: 220 ITWSTVEKMTSSGWSWTIPEPQDRIDYIFYRGSLLSPIQSYTYQGNVTVYPKPFHWKNDY 279 Query: 292 LSDHCPISIDY 302 SDH + + Sbjct: 280 PSDHFAVITTF 290 >gi|255071691|ref|XP_002499520.1| predicted protein [Micromonas sp. RCC299] gi|226514782|gb|ACO60778.1| predicted protein [Micromonas sp. RCC299] Length = 414 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 45/340 (13%), Positives = 107/340 (31%), Gaps = 59/340 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA--DIVFLQEMGSYNA 79 K+ +V+WN+ L + SV+ + + + L+ D+V LQE+ A Sbjct: 76 DKLFIVTWNVQMLP--GVLPGCAGSVRHLVARAEQIAERILELEPWPDVVVLQEVWHPYA 133 Query: 80 VAKVFPKN--TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN--VRVLQQSYPLLGAKD 135 +++ + + ++ R T + V + + + + + ++ Sbjct: 134 RSELRCRLLGRYQHIHAPGAGSLAGARPGGQSCKTGLLVLSRYHNLHLEHRFHKFQASQG 193 Query: 136 SFSRAG----------NRRAVELLVEINGKKIWVLD-IHLKSFCFLDSLENTYSPSCSLL 184 S A R+ ++ ++ G V + + + + Sbjct: 194 VESWAFGKGVSATAIRLRKHTDIQGKVEGIGFRVRPRTRCFVLFNVHAQSDYWRCGARTR 253 Query: 185 SQQAQWLKDWITQKKES-----LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 ++Q + ++D+I + E + ++ GD N + + +P D L + Sbjct: 254 ARQMEEVRDFIQESIEDFGHLDVRRAILCGDLNVEAGTCECDAAMATLGNPRDLLCWNER 313 Query: 240 EK--DSRCNANKNLRNK---------------IPIDYFV-MDQ-NAYKFLIQESFSEILY 280 E+ + R +DY + + A+ + + E + Sbjct: 314 EERVWAPTFPIGRWRYDPCDDSRCRYAPLTPTKRLDYVLDVTHTEAFVRGREVTMEENRF 373 Query: 281 NEDDI----------------KSRGKRLSDHCPISIDYDF 304 + + G LSDH P+ F Sbjct: 374 DPPTADAFSHARTLTTGVTQRGTDGTPLSDHAPVLAMIAF 413 >gi|115398812|ref|XP_001214995.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114191878|gb|EAU33578.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 436 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 32/323 (9%), Positives = 72/323 (22%), Gaps = 58/323 (17%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 S + +R+++ N L + K +R + L + +IV LQE + Sbjct: 10 SSPETIRILTLNCWGL-----KYIAKYRYQRLSEIGRQLA--LADPPPEIVGLQECWTQQ 62 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GA 133 + + + + K +A+ K + A Sbjct: 63 DYESIRQQTRHLL--------PYGKFYFGGIWGAGLAILSKWPIEESSMHAYPLNGRPTA 114 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + + + + + + + QA + Sbjct: 115 FFRGDWYVGKGVACARIRFGAHPVHDVAEVFCTHLHAPYEKEPNDSYICHRTAQAWEIAK 174 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP-----------NDSLIRFPKEKD 242 + + + GDFN + + + IDP + +R Sbjct: 175 LMRGAADRGHLVIGLGDFNMLPSVIHPDSSVGAAIDPVEKKRNRPVPSAEFNLRVNGATC 234 Query: 243 SRCNANKNLRNKI----------------------PIDYFVMDQNAYKFLIQESFSEILY 280 +DY + + + Sbjct: 235 DGRFNTWRWEKAERKRLARGEDVTVDPDAPCPRGKRLDYIFVGPS-----RWAVDDVRIA 289 Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303 + LSDH + Sbjct: 290 MTQRHPTLKCSLSDHFAVEAVIS 312 >gi|109499818|ref|XP_223499.3| PREDICTED: APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Rattus norvegicus] gi|109500734|ref|XP_001059968.1| PREDICTED: APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Rattus norvegicus] Length = 516 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 80/331 (24%), Gaps = 72/331 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+VSWNIN + + + T LR + LDADIV LQE + Sbjct: 2 LRVVSWNINGIRRPLQGLGCEVTSNC----PTALRHILRELDADIVCLQETKVSRDALTE 57 Query: 82 KVFPKNTWC-IFYSTERLINHSKRDSNNDIHTA-----------IAVRKKNVRVLQQSYP 129 + + F + +S + A +V Sbjct: 58 PLAVVEGYNSYFSFSRSRSGYSGVATFCKDSVTPVAAEEGLSGQFATLSGHVGCYGNMNE 117 Query: 130 LLGAKDSFSRAGNRRAV----ELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLL 184 + + R + E K + +++++ LL Sbjct: 118 FTQEQLRALDSEGRALLTQHKICTQEGKEKPLTLINVYCPHASPGNHERLTFKMRFYRLL 177 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKIN--------------YLGNNDDFWKTIDP 230 +A+ L + +I GD N + + Sbjct: 178 QIRAEALLA-------AGSHVIILGDINTAHHPIDHCNAGNLECFEEDLGRRWMDGLLSN 230 Query: 231 NDSLIRFPKEKDSRCNANKNL------------------RNKIPIDYFVMDQNAYKFLIQ 272 + +DY + +++ Sbjct: 231 LEYPAGSHIGPFMDSYRYFYPKQERAFTCWSMISGARSLNYGTRLDYILGNRDL------ 284 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 I +D SDHCP+ + Sbjct: 285 ----IIDTLQDAFLLPEVMGSDHCPVGAVLN 311 >gi|26989983|ref|NP_745408.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida KT2440] gi|24984902|gb|AAN68872.1|AE016519_5 conserved hypothetical protein [Pseudomonas putida KT2440] Length = 257 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 35/286 (12%), Positives = 80/286 (27%), Gaps = 56/286 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----GSYNA 79 + +++ N++ LR+ + AD+VFLQE+ + Sbjct: 21 LNVLTLNVHKGFTFFNRRF----------ILPELREAVRATGADLVFLQEVHGSHQQHAL 70 Query: 80 VAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +P+ F + + + A+ K + + + Sbjct: 71 RHPAWPETPQYEFLADSMWPQFAYGRNAVYPHGDHGNALLSKFPIRRFNNLDVSVQGN-- 128 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R + +E+ G V + + + +Q + + D + Sbjct: 129 ---EQRGLLHCQLEVPGHD-EVHAVCVHLGLR-----------EAHRQRQVKLMLDLLAS 173 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 P +IAGDFN W+ + + + + + Sbjct: 174 -LPPNAPVIIAGDFND-----------WRLKADAVLSEHLTEAFGTPARSFPARLPLLRL 221 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + + + + K LSDH P++ + + Sbjct: 222 DRIYLRNA-----VPGAAQVLS------KYPWSHLSDHVPLAAEIN 256 >gi|4826698|ref|NP_004935.1| deoxyribonuclease gamma precursor [Homo sapiens] gi|2494173|sp|Q13609|DNSL3_HUMAN RecName: Full=Deoxyribonuclease gamma; Short=DNase gamma; AltName: Full=DNase I homolog protein DHP2; AltName: Full=Deoxyribonuclease I-like 3; Short=DNase I-like 3; AltName: Full=Liver and spleen DNase; Short=LS-DNase; Short=LSD; Flags: Precursor gi|1399719|gb|AAB63967.1| DNase1-Like III protein [Homo sapiens] gi|2905786|gb|AAC35752.1| liver and spleen DNase precursor [Homo sapiens] gi|16198371|gb|AAH15831.1| DNASE1L3 protein [Homo sapiens] gi|119585762|gb|EAW65358.1| deoxyribonuclease I-like 3, isoform CRA_a [Homo sapiens] gi|119585763|gb|EAW65359.1| deoxyribonuclease I-like 3, isoform CRA_a [Homo sapiens] gi|123986698|gb|ABM83776.1| deoxyribonuclease I-like 3 [synthetic construct] gi|123999020|gb|ABM87096.1| deoxyribonuclease I-like 3 [synthetic construct] gi|189053848|dbj|BAG36108.1| unnamed protein product [Homo sapiens] Length = 305 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 40/290 (13%), Positives = 95/290 (32%), Gaps = 32/290 (11%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN- 78 A +R+ S+N+ + E S + + ++ + K DI+ + E+ N Sbjct: 17 SALAMRICSFNVRSFGE---------SKQEDKNAMDVIVKVIKRC--DIILVMEIKDSNN 65 Query: 79 ----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + +N+ + + R++ + + A ++K V V ++SY + Sbjct: 66 RICPILMEKLNRNSRRGITYNYVISSRLGRNTYKEQY-AFLYKEKLVSV-KRSYHYHDYQ 123 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D + +R + + + I S + + + D Sbjct: 124 DGDADVFSREPFVVWFQSPHTAVKDFVIIPLHTTPET--------SVKEIDELVEVYTDV 175 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + K F+ GDFN +Y+ + + + +++ Sbjct: 176 KHRWKAEN--FIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAY 233 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 I + Q ++ +S S + + + + L SDH P+ Sbjct: 234 DRI--VLRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKL 281 >gi|332299266|ref|YP_004441187.1| Endonuclease/exonuclease/phosphatase [Porphyromonas asaccharolytica DSM 20707] gi|332176329|gb|AEE12019.1| Endonuclease/exonuclease/phosphatase [Porphyromonas asaccharolytica DSM 20707] Length = 357 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 38/341 (11%), Positives = 85/341 (24%), Gaps = 55/341 (16%) Query: 6 VLALVF-FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN----------SVKRTTSDY 54 +L+L F + ++ Q+V + +N+ L + +++R Sbjct: 16 LLSLSFGIIYAQQSTTPQRVTVAFYNLENLFDTIDQENNDEEFLPEGANRWTLERYQHKL 75 Query: 55 TLLRQYAKNLDAD---IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 + + D I+ + E+ + + + + + I H I Sbjct: 76 RNMSHVISLIGGDGPAIIGVAEIENRGVLEDLIAEES---LRDKHYDIVHYDSPDRRGID 132 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 AI + + +V + + R V ++G+ + VL H S + Sbjct: 133 CAILYQPEVYKVFASGARAVEIPNEPWIK-TRDVVYASGLLDGEIVHVLVGHWPSRSGGE 191 Query: 172 SLE-NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----- 225 ++ + + + A L ++ GDFN D Sbjct: 192 AVSLHRRMAAAKTMRSVADSL-----YTLFPGSKVIMMGDFNDDPISPSVRDGLGVQNHP 246 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF---------------- 269 P D + + D ++ Sbjct: 247 DQTKPADYYTPMLQLYNKGMGTLAYRDVWNLFDIIAVNGELIGSNPTTWQLYRDPETTDM 306 Query: 270 ----------LIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + SDH P+ + Sbjct: 307 AFIFKQPFMIQQSGQYKGYTLRTFVGGQWQGGYSDHFPVYV 347 >gi|205356520|ref|ZP_03223283.1| exodeoxyribonuclease [Campylobacter jejuni subsp. jejuni CG8421] gi|205345525|gb|EDZ32165.1| exodeoxyribonuclease [Campylobacter jejuni subsp. jejuni CG8421] Length = 259 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 78/304 (25%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + D + QE+ A Sbjct: 8 MKLLSWNVNGLRAICDKNA---------------LDWIAQEQIDFIGFQEI---KAHEDK 49 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FPK + + + + ++ + +++ + F R Sbjct: 50 FPKKIYEYPFKHMYFNSAKRA-----GYSGVMSLCNFNSEVKK-------CEFFDDEEGR 97 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++E K I + +I+ + + N + L Sbjct: 98 -----VLEHRFKNIALFNIYFPNGQKDEERLNFKMKFYADFLVYLDKLLK-------DGF 145 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GD N L + + + F + Sbjct: 146 EIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKY 205 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + L + ++ SDH P+ Sbjct: 206 SWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFIRDDIF-----------GSDHAPVG 254 Query: 300 IDYD 303 I+ D Sbjct: 255 IEID 258 >gi|154276148|ref|XP_001538919.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150413992|gb|EDN09357.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 301 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 36/295 (12%), Positives = 74/295 (25%), Gaps = 21/295 (7%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+++ NI + K R L ++ + + LQE+ Sbjct: 8 PIRILTHNIRY-ATSAPFRGEKPWKDRKQRLLNELHYHSCHNPETFICLQEVLHVQLNDI 66 Query: 83 VFPKNT-----------WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + N W + S A+ +++ V P + Sbjct: 67 LSGLNPSTSTSTGATTEWAYIGVGRDDGKQAGEYSPIFYRPAVWELEESKTVWLSETPSV 126 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + + R + + + VL + D + + L+ A Sbjct: 127 P-SRGWDASSIRIVTIGVFKHLVSRKRVLGMSTHL---DDQGSKSRYEAAKLILTMANLY 182 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW---KTIDPNDSLIRFPKEKDSRCNAN 248 ++ +AGDFN + + + +D + + Sbjct: 183 LTKNRLASRNINGIFLAGDFNSEEDQEAYRVLTAVDSQFVDAQKQVDTALRYGSENTYTG 242 Query: 249 KNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + E + G SDH + D Sbjct: 243 FGYEDEGPKRIDYVLFGPKRGANPAWSWSIEGYAVVPNKFDDGVLNSDHRAVVAD 297 >gi|324993723|gb|EGC25642.1| exodeoxyribonuclease [Streptococcus sanguinis SK405] gi|324994964|gb|EGC26877.1| exodeoxyribonuclease [Streptococcus sanguinis SK678] gi|327462994|gb|EGF09315.1| exodeoxyribonuclease [Streptococcus sanguinis SK1] Length = 275 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 83/305 (27%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q + +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLS------QAVLQTLQAENADIIAIQETKLSATGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K ++P +GA + G Sbjct: 55 KHLEILTNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E +G +V ++ + + + ++ L Sbjct: 114 ---IITLEFDG--FFVTQVYTPNAGDGLKRLDDRQVWDAKYAEYLATLDQ--------QK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F N Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 VMEIE 274 >gi|315656371|ref|ZP_07909260.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492930|gb|EFU82532.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 294 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 35/283 (12%), Positives = 73/283 (25%), Gaps = 48/283 (16%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + +N D+D++ LQE+ + + W + R+ + + Sbjct: 21 DWLENDDSDLLCLQEVRATPQDTQDLFGPAWDVHVWPCRVKGRAGVALGARRDSD----W 76 Query: 119 KNVRVLQQSYPLLGAK--DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + ++ + P L A+ R + G ++ +L S + Sbjct: 77 EIGQLTEGLPPDLYAEVGGEPDVDSGRWLEAAIHGPQGTTFTLVSAYLHSGELRTEKQEQ 136 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDD----------- 223 + ++ Q L S P +I GDFN + Sbjct: 137 KIAYLHRVGERVQQLSARAMAGAGSDTPQEALICGDFNIVRTARDIKNWKPNHNKTSGVM 196 Query: 224 ----------FWKTIDPNDSLIRFPKE---KDSRCNANKNLRNK---------IPIDYFV 261 T+ + L + +DY + Sbjct: 197 DEEIAFLDAWMADTLSGSKRLPCVDVGRALAGDTDGPYTWWSWRGKAYDNNAGWRLDYHM 256 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + R +DH P+++ YDF Sbjct: 257 ATPGLAGQAQSAAV-------YRAPAYDARFTDHAPVTVTYDF 292 >gi|189461652|ref|ZP_03010437.1| hypothetical protein BACCOP_02315 [Bacteroides coprocola DSM 17136] gi|189431624|gb|EDV00609.1| hypothetical protein BACCOP_02315 [Bacteroides coprocola DSM 17136] Length = 360 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 39/301 (12%), Positives = 85/301 (28%), Gaps = 53/301 (17%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + ++L+++N ++ + + + + Y ++ DADI+ LQE Sbjct: 95 PEGGEVIKLLTYNTQDIALTKEYDKQEGNP---------VLNYLRDSDADIICLQEFNPS 145 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 V + + R+ +A + + ++ ++ Sbjct: 146 AKVKQKEIDRALACYPYHVRVKGEGPG--------RLACYSRYPILSAETIDYKTESNAS 197 Query: 138 SRAGNRRAVELLVEINGK---------KIWVLDIHLKSFC------FLDSLENTYSPSCS 182 + + LV IN V + LKS L + + + Sbjct: 198 ILYRLKFGNDTLVLINNHLESNKLDAHDKTVYNDILKSPREKNIKNGGKHLFHKIAKVVA 257 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 + + QA + I ++ GDFN + + ++ + K Sbjct: 258 VRAPQADSVAQAIA--VNRTRYMLVCGDFNDSPISYA-HRVVGQGLND-----VYRKAGR 309 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R ID+ F + D + SDH P+ Sbjct: 310 GPGFTYYENRFYFRIDHIFASDA---------FRILECKIDRSINT----SDHYPVWCLL 356 Query: 303 D 303 + Sbjct: 357 E 357 >gi|57237312|ref|YP_178325.1| exodeoxyribonuclease III [Campylobacter jejuni RM1221] gi|148926400|ref|ZP_01810084.1| exodeoxyribonuclease [Campylobacter jejuni subsp. jejuni CG8486] gi|57166116|gb|AAW34895.1| exodeoxyribonuclease III [Campylobacter jejuni RM1221] gi|145844792|gb|EDK21897.1| exodeoxyribonuclease [Campylobacter jejuni subsp. jejuni CG8486] Length = 259 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 78/304 (25%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + D + QE+ A Sbjct: 8 MKLLSWNVNGLRAICDKNA---------------LDWIAQEQIDFIGFQEI---KAHEDK 49 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FPK + + + + ++ + +++ + F R Sbjct: 50 FPKKIYEYPFKHMYFNSAKRA-----GYSGVMSLCNFNSEVKK-------CEFFDDEEGR 97 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++E K I + +I+ + + N + L Sbjct: 98 -----VLEHRFKNIALFNIYFPNGQKDEERLNFKMQFYADFLVYLDKLLK-------DGF 145 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GD N L + + + F + Sbjct: 146 EIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKY 205 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + L + ++ SDH P+ Sbjct: 206 SWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFIRDDIF-----------GSDHAPVG 254 Query: 300 IDYD 303 I+ D Sbjct: 255 IEID 258 >gi|329770087|ref|ZP_08261482.1| hypothetical protein HMPREF0433_01246 [Gemella sanguinis M325] gi|328837398|gb|EGF87028.1| hypothetical protein HMPREF0433_01246 [Gemella sanguinis M325] Length = 356 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 93/309 (30%), Gaps = 61/309 (19%) Query: 29 WNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--- 77 WNI G + + + Q K+ +ADI LQE+ Sbjct: 63 WNIGYAGLDKDEDFFMDGGKMVLPLDKAHVEENIKNIAQIIKDENADITLLQEVDEDSKR 122 Query: 78 -------NAVAKVFPKNT---WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 + + K N+ + + N+ I+TA Q Sbjct: 123 SYNINQVSYLDKELGLNSILAYNFKVKYIPYPWPTLGKVNSGIYTATKHNVDRAERYQMP 182 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 P + + + VE + K++ +++ + + Y Q Sbjct: 183 IPFTFPEKLANLKRGFSVIYSKVENSDKQLVIIN----------AHFDAYDKENKGKIAQ 232 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRK------------INYLGNNDDFWKTIDPNDSLI 235 + L +++ ++ + ++ DFN+ L ++F K++ P + Sbjct: 233 TKQLVEFVQKEYKKGNYVLVGADFNQSLKTLSKEEINKVPEDLWRAENFDKSLIPEGFKL 292 Query: 236 RFPKEKDS------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + K+S + ID +++ N + + + Sbjct: 293 VYDESKNSARLNNKPYVSGSEGTYGFIIDGYMVSDNIEVVSV------------ETLGQD 340 Query: 290 KRLSDHCPI 298 R SDH P+ Sbjct: 341 YRYSDHNPV 349 >gi|257125492|ref|YP_003163606.1| endonuclease/exonuclease/phosphatase [Leptotrichia buccalis C-1013-b] gi|257049431|gb|ACV38615.1| Endonuclease/exonuclease/phosphatase [Leptotrichia buccalis C-1013-b] Length = 241 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 84/282 (29%), Gaps = 45/282 (15%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + RL+++NI G L Q K D + LQE+ +K Sbjct: 2 EFRLITYNIFGARLTNG---------------KELAQSLKKYKPDFIGLQEVDRNTKRSK 46 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 K + IA K ++ + + Sbjct: 47 FRDVVQEMAQELGYSYYYFQKAMDFDSGEYGIAFISKY---DVKNIYIHQLPGNSKEKRQ 103 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 A L +E KKI V++ HL + S +++ L I + Sbjct: 104 VLAARLKIEKFKKKILVVNTHLDN-------------SLDNKNEELADLFAAIEEF--KG 148 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-NKIPIDYFV 261 + GDFN +F++ I N + F + + +N IDY + Sbjct: 149 DIKFLCGDFNLLPTT-----EFYQKIAENWNDTYFEGKDLENKSNLENRNLETQRIDYIM 203 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +++ Q + +D +LSDH P + Sbjct: 204 AKKDSNYRTKQS------FFINDDLQEWTKLSDHLPYMAILE 239 >gi|149047282|gb|EDL99951.1| rCG36041 [Rattus norvegicus] Length = 485 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 80/331 (24%), Gaps = 72/331 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+VSWNIN + + + T LR + LDADIV LQE + Sbjct: 2 LRVVSWNINGIRRPLQGLGCEVTSNC----PTALRHILRELDADIVCLQETKVSRDALTE 57 Query: 82 KVFPKNTWC-IFYSTERLINHSKRDSNNDIHTA-----------IAVRKKNVRVLQQSYP 129 + + F + +S + A +V Sbjct: 58 PLAVVEGYNSYFSFSRSRSGYSGVATFCKDSVTPVAAEEGLSGQFATLSGHVGCYGNMNE 117 Query: 130 LLGAKDSFSRAGNRRAV----ELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLL 184 + + R + E K + +++++ LL Sbjct: 118 FTQEQLRALDSEGRALLTQHKICTQEGKEKPLTLINVYCPHASPGNHERLTFKMRFYRLL 177 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKIN--------------YLGNNDDFWKTIDP 230 +A+ L + +I GD N + + Sbjct: 178 QIRAEALLA-------AGSHVIILGDINTAHHPIDHCNAGNLECFEEDLGRRWMDGLLSN 230 Query: 231 NDSLIRFPKEKDSRCNANKNL------------------RNKIPIDYFVMDQNAYKFLIQ 272 + +DY + +++ Sbjct: 231 LEYPAGSHIGPFMDSYRYFYPKQERAFTCWSMISGARSLNYGTRLDYILGNRDL------ 284 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 I +D SDHCP+ + Sbjct: 285 ----IIDTLQDAFLLPEVMGSDHCPVGAVLN 311 >gi|114587559|ref|XP_001174037.1| PREDICTED: deoxyribonuclease gamma isoform 2 [Pan troglodytes] gi|114587561|ref|XP_001174043.1| PREDICTED: deoxyribonuclease I-like 3 isoform 3 [Pan troglodytes] gi|114587563|ref|XP_001174051.1| PREDICTED: deoxyribonuclease I-like 3 isoform 4 [Pan troglodytes] Length = 305 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 39/286 (13%), Positives = 94/286 (32%), Gaps = 32/286 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78 +R+ S+N+ + E S + + ++ + K DI+ + E+ N Sbjct: 21 LRICSFNVRSFGE---------SKQEDQNAMDVIVKVIKRC--DIILVMEIKDSNNRICP 69 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + +N+ + + R++ + + A ++K V V ++SY +D + Sbjct: 70 ILMEKLNRNSRRGITYNYVISSRLGRNTYKEQY-AFLYKEKLVSV-KRSYHYHDYQDGDA 127 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 +R + + + I S + + + D + Sbjct: 128 DVFSREPFVVWFQSPHTAVKDFVIIPLHTTPET--------SVKEIDELVEVYTDVKHRW 179 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 K F+ GDFN +Y+ + + + +++ I Sbjct: 180 KAEN--FIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAYDRI- 236 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 + Q ++ +S S + + + + L SDH P+ Sbjct: 237 -VLRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKL 281 >gi|307546855|ref|YP_003899334.1| hypothetical protein HELO_4265 [Halomonas elongata DSM 2581] gi|307218879|emb|CBV44149.1| K06896 [Halomonas elongata DSM 2581] Length = 273 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 33/286 (11%), Positives = 84/286 (29%), Gaps = 54/286 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEMGS 76 ++L+++N+ + + + ++ + D+V LQE+ Sbjct: 18 LKLLTFNLQVGIQTSAYHHYLTRSWQHLLPHPQRLKRLDMIGEVLSRF--DVVGLQEVDG 75 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + + + + + + + N + + S + Sbjct: 76 GSFRSSRVNQVEYLASRAGFPH-----HFQQLNRNLGQLAQHSNGLLSRLSPQSIEEHSL 130 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A+ + + HL S +Q +L + + Sbjct: 131 PGPMPGRGAIHARFGDGPDALHLFVAHLAL-------------SHRARVRQLDYLSELVQ 177 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 L V+ GD N + L ++ F K++ P + + + + Sbjct: 178 ----PLRHVVVMGDLNCTPDQLHAHERFRKSL---------PLHPVRPPLSYPSWQPRRA 224 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D+ ++ + D ++ SDH P++ID Sbjct: 225 LDHILLSDSLQA--------------DRVEVLEHLFSDHLPVAIDI 256 >gi|237716569|ref|ZP_04547050.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D1] gi|229442552|gb|EEO48343.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D1] Length = 353 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 38/343 (11%), Positives = 88/343 (25%), Gaps = 59/343 (17%) Query: 2 IRKYVLALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKN----------- 45 ++K ++ L + + Q+ + +N+ L + + Sbjct: 13 MKKSLMTLGVLALFVLMAYGQEKKFALYSVAFYNMENLFDTIHDEGKNDYEYLPNGTNQW 72 Query: 46 SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + + + + + L D I+ + E+ +Y + + + Sbjct: 73 NTMKYKAKLKNMSEILSMLSTDKLPMGPAIIGVSEIENYRVLEDILKQP---ALADRGYQ 129 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 H + + A K + + + + R + I G+K+ Sbjct: 130 YVHYEGADQRGVDCAFFYNPKLFELTNSKL-VPYVYINDTVHKTRGFLIASGNIAGEKMH 188 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 + H S + Q + +KD + +++S VI GD N Sbjct: 189 FIVNHWPSRAAASPVRERAGE-------QVRAIKDSL-LREDSAAKIVIMGDMNDDPMDK 240 Query: 219 GNNDDFWKT-----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLI 271 + P D + D V N Sbjct: 241 SMAVALGAKRKPADVGPTDLYNPWWDTLKKGYGTLMYKGKWNLFDQIVFTGNLLGTDRST 300 Query: 272 QESFSEILYNEDDIKSRGKR-----------------LSDHCP 297 + + ++ D + + + SDH P Sbjct: 301 LKFYKHEIFRRDFMFQKEGKYKGYPKRTQAGGVWLNGYSDHLP 343 >gi|119898900|ref|YP_934113.1| endonuclease/exonuclease/phosphatase family protein [Azoarcus sp. BH72] gi|119671313|emb|CAL95226.1| conserved hypothetical endonuclease/exonuclease/phosphatase family protein [Azoarcus sp. BH72] Length = 323 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 82/309 (26%), Gaps = 52/309 (16%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM- 74 ++ + Q + + +WNI R+ + + + D++ + E+ Sbjct: 27 PSSCLDQTINIATWNIREFG----------KKPRSEAAIHYVAEILGQF--DLISVVELR 74 Query: 75 GSYNAVAKVFP--KNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 + + +V W YS + +R A+ + + + Sbjct: 75 ENLGDLKRVLDILGPEWRAVYSGVVPDDGGNGERIGFIFDRRAVGFQGMAAVAVPPRVKV 134 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G R R + ++ H++ + + Sbjct: 135 GGEYLIQDRFWWRLPYMASFCAGSFEFILIAAHIRWGNGDTD-----------RLAEIEL 183 Query: 191 LKDWIT----QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK----- 241 L WI ++ + ++ GDFN + + Sbjct: 184 LAQWIDVFRQSEQATTRDLIVVGDFNIPSRRSALFKAITRYGLHVPKALLADTFGSNLAR 243 Query: 242 ----------DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 S + +D+ + L+ E F L+ + + Sbjct: 244 NKRYDQILQYPSEAYPDSFADKGGVLDF-----HVSDALVGELFPPELFPTMTMDKYTYQ 298 Query: 292 LSDHCPISI 300 LSDH P+ I Sbjct: 299 LSDHLPLWI 307 >gi|111023203|ref|YP_706175.1| DNA-(apurinic or apyrimidinic site) lyase [Rhodococcus jostii RHA1] gi|110822733|gb|ABG98017.1| probable DNA-(apurinic or apyrimidinic site) lyase [Rhodococcus jostii RHA1] Length = 268 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 34/279 (12%), Positives = 80/279 (28%), Gaps = 55/279 (19%) Query: 52 SDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 + L ++ + +AD+V LQE + P + ++ Sbjct: 16 AARKGLTEWIERTEADVVCLQETRASDEQLAETLAPALEGGWNLVSAE--------PSSK 67 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 +A+ + ++ + D F+ AG +E + + V ++L S Sbjct: 68 GRNGVAILSRKP---ADAFRVGHGDDEFATAGR------YLEADFDDLTVASLYLPSG-- 116 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG---------- 219 ++ + A++L + V+ GD+N L Sbjct: 117 -EAQTPRQEEKERFMDSFARYLTATAAAAVAAGRHVVVCGDWNIAHTELDLKNWKTNKKN 175 Query: 220 ------NNDDFWKTIDPNDSLIRFPKEKDSR-CNANKNLRNK---------IPIDYFVMD 263 + + ++ + + IDY + Sbjct: 176 SGFLPNEREWLGALFAEDAHWTDVVRQLNPDVAGPYSWWSYRGKAFDNDSGWRIDYQIAT 235 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + Q + ++ +R SDH P+++ Y Sbjct: 236 RELAERAKQA-------VVERAETYDQRWSDHAPVTVQY 267 >gi|117928676|ref|YP_873227.1| exodeoxyribonuclease III [Acidothermus cellulolyticus 11B] gi|117649139|gb|ABK53241.1| Exodeoxyribonuclease III [Acidothermus cellulolyticus 11B] Length = 282 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 40/318 (12%), Positives = 76/318 (23%), Gaps = 77/318 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + L ++ + D+V LQE Sbjct: 1 MRIATWNVN----------------SVVARLPRLHEWLDTVRPDVVCLQETKCAGDA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ + + A Sbjct: 42 -------FPSEGIIERGYQVAAHGDGRWNGVAILSRIGLEEVTRGFPGQPGYAAPPAAPS 94 Query: 144 RAVELL---------------VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + + + + +++ + LDS Y + Sbjct: 95 PDSDDALLPAAAAEPVVEARAIGATCGGVRIWSLYVPNGRALDSPHYAYKLEWLAALRT- 153 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDS 233 + S PF++AGDFN D + I Sbjct: 154 ---ALAAELARHSGRPFIVAGDFNIAPTDRDVWDPAVFVGSTHVTDAERQALQAICDLGL 210 Query: 234 LIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 FP+ + + ID + + A D Sbjct: 211 RDIFPRALKYD-YPFTYWDYRAGMFPKNQGMRIDLVLANDAAA-------AKVTDAYVDR 262 Query: 285 IKSRGKRLSDHCPISIDY 302 +GK SDH PI +D+ Sbjct: 263 EARKGKGPSDHAPIVVDF 280 >gi|330959493|gb|EGH59753.1| hypothetical protein PMA4326_13159 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 370 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 42/301 (13%), Positives = 83/301 (27%), Gaps = 43/301 (14%) Query: 8 ALVFFLVPCT-ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 AL+ + A++A R+ +WN L + S + D Sbjct: 3 ALLVLATGVSGAAIAADARVGTWNTMRLGNGDQKSYLALAAVAANVDVLA---------- 52 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +QE+ + + + L + N R V+ Sbjct: 53 ----VQEVMNDEGIQYLKLALEQRTREKWSSLCSSPVGSRNYKEQYCFLSRDSAVQYEDG 108 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + L K F R + +GK + +H+ S + Sbjct: 109 AVSFLDRKHVFM----REPYSARFKSLSDGKTFALATVHIIYG-----------KSAADR 153 Query: 185 SQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 + + + L ++ ++ P ++ GDFN + + I Sbjct: 154 TPELKELGNYWEWLEQVYPGEPIMLMGDFNMPPSDPAFESLRTRAI------PMVTDG-- 205 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SDHCPISID 301 + +N + R D +Q+A + G+R SDH P+ Sbjct: 206 ASTLSNTSGRFANLYDNVFANQSARSMMSGVGIVNYPLMLKVSHEDGRRAVSDHAPVFFQ 265 Query: 302 Y 302 Sbjct: 266 L 266 >gi|296395160|ref|YP_003660044.1| exodeoxyribonuclease III Xth [Segniliparus rotundus DSM 44985] gi|296182307|gb|ADG99213.1| exodeoxyribonuclease III Xth [Segniliparus rotundus DSM 44985] Length = 267 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 32/272 (11%), Positives = 69/272 (25%), Gaps = 55/272 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L + AD V LQE+ + + ++ + + +A+ Sbjct: 23 LLGWLSAAPADYVCLQEVRATEPETRAALAPALADGWTLVQAPA------AQKGRSGVAI 76 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + + +G D R +E + K+ + ++L S + Sbjct: 77 LSRREPDAVR----IGHGDPQFAESGRY-----IEADFGKLTLASLYLPSGEAQTERQVE 127 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK---------- 226 + +++ + +I GD+N L + Sbjct: 128 KDQFLTTFG-------EYLKPLAHAKRDVLICGDWNIAHTELDIKNWKGNLKASGFLPHE 180 Query: 227 -------TIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFL 270 D + + IDY V ++ Sbjct: 181 RAWIGEVFADGSGWTDVQRAFHPGEAGPYSWWSYRGQAFDNDAGWRIDYHVANKPLAARA 240 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + R SDH PI ++Y Sbjct: 241 VKA-------VTQRAEHYELRWSDHAPIVVEY 265 >gi|296119006|ref|ZP_06837579.1| exodeoxyribonuclease III [Corynebacterium ammoniagenes DSM 20306] gi|295968104|gb|EFG81356.1| exodeoxyribonuclease III [Corynebacterium ammoniagenes DSM 20306] Length = 269 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 29/304 (9%), Positives = 77/304 (25%), Gaps = 67/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ +WNIN + D D++ LQE + Sbjct: 1 MRIATWNIN----------------SVRTRGERALNLMDKHDIDVLCLQETKVADDKFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++F + + + + +A+ + + Sbjct: 45 ELFEDAGYHVVFH------------GLNQWNGVAIVSREEPSEVITGFPEQPGYHNDEDK 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + + + + +++ + + Y L + KK Sbjct: 93 EQAPEARALGAVIRNVEIWSLYVPNGREITQRHYDYKLDF------LYALARYAEGKKRE 146 Query: 202 LVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 ++ GDFN + ++ ++ + + Sbjct: 147 K--LLLTGDFNIAPRNEDVWDLELFRGKTHVTEPERAAFQRLEEAGLEEVTRQYTEKDRW 204 Query: 247 ANKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID+ + ++ + + D + K SDH + Sbjct: 205 TYFDYKSMRFQKDEGMRIDFQMATKSLAEKVTGAGL-------DRKERAEKGTSDHLLLW 257 Query: 300 IDYD 303 D+D Sbjct: 258 ADFD 261 >gi|21312312|ref|NP_081385.1| deoxyribonuclease-1-like 1 precursor [Mus musculus] gi|288541367|ref|NP_001165625.1| deoxyribonuclease-1-like 1 precursor [Mus musculus] gi|92090593|sp|Q9D7J6|DNSL1_MOUSE RecName: Full=Deoxyribonuclease-1-like 1; AltName: Full=DNase X; AltName: Full=Deoxyribonuclease I-like 1; Short=DNase I-like 1; Flags: Precursor gi|12843807|dbj|BAB26122.1| unnamed protein product [Mus musculus] gi|23270983|gb|AAH23246.1| Dnase1l1 protein [Mus musculus] gi|73921494|gb|AAZ94277.1| DNase X [Mus musculus] gi|74213970|dbj|BAE29406.1| unnamed protein product [Mus musculus] gi|123228996|emb|CAM24336.1| deoxyribonuclease 1-like 1 [Mus musculus] gi|148697888|gb|EDL29835.1| deoxyribonuclease 1-like 1, isoform CRA_c [Mus musculus] Length = 314 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 77/303 (25%), Gaps = 33/303 (10%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +R V+A + L+ + R+ ++N + L+ + S L Q Sbjct: 19 MRGLVMAPLLILLVGGT---EAFRICAFNAHRLTL---------AKLTKESVMDTLVQIL 66 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 DI+ LQE+ + F S L + S R Sbjct: 67 ARC--DIMVLQEVVDSSQNTVPFLLQKLKSSRSYSFLNSSLLGRSTYKEKYVYIYRSDKT 124 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPS 180 +VL + R + K + V+ + L + E Sbjct: 125 QVLN-----FYQYNDTDDIFAREPFVAHFTLPSKTLPSVVLVPLHTTPKDVEKELNALYD 179 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 L Q ++ GDFN L + + Sbjct: 180 VFLDVYQRWQ-----------NENVILLGDFNADCASLTKKRLKSLLLRTKAGFHWVIPD 228 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + I V Q L + + + R+SDH P+ + Sbjct: 229 GEDTTVRASTNCTYDRI--VVHGQGCQMLLKAAATFDFPKRFQLTEEEALRISDHYPVEV 286 Query: 301 DYD 303 + Sbjct: 287 ELS 289 >gi|255323252|ref|ZP_05364387.1| exodeoxyribonuclease III [Campylobacter showae RM3277] gi|255299775|gb|EET79057.1| exodeoxyribonuclease III [Campylobacter showae RM3277] Length = 256 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 80/304 (26%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + + D + QE+ Sbjct: 1 MKLISWNVNGLRAVAAKDGF---------------AWLEQQKPDFLGFQEI---KVRESD 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P + + ++ + + + ++ + K Q++ + Sbjct: 43 VPAEIYKLGFNEISVNS-----AARAGYSGVMSLAKFSSATQKAAFFDDDEGR------- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++E + + +I+ + D+ + +I + + Sbjct: 91 -----VLEHRFGNVVLFNIYFPNGQKDDAR-------LAYKMDFYAKFLAYIQELVKQGK 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + GD N L + + + F + +A Sbjct: 139 DVIFCGDVNTAHREIDLKNPKANAKTSGFLPIERAWLDEVVACGFIDTFRHVRGDAADAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + L D SDHCP+ Sbjct: 199 SWWSYRFNARAKNVGWRIDYFFISSSLKDRLK-----------DAFILSDITGSDHCPVG 247 Query: 300 IDYD 303 I+ D Sbjct: 248 IEID 251 >gi|326436925|gb|EGD82495.1| hypothetical protein PTSG_03143 [Salpingoeca sp. ATCC 50818] Length = 548 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 36/324 (11%), Positives = 87/324 (26%), Gaps = 65/324 (20%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P +++ + +R+ S+NI ++E + + L + + D D++ QE+ Sbjct: 241 PHASTLRRPLRIASYNIWNINEFDDGT--------YEERLNRLAAHVRTEDPDVIAFQEV 292 Query: 75 GSYNAVAKVFPKNTW--CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 ++ + + +AV K V L Sbjct: 293 RHDALRDSQPASLAALLPTYHYVYQPAMTYAEQVFGRVEEGVAVFSKYPIVGIDYRLLYR 352 Query: 133 AKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + + + A R + + V+ + + H + ++Q + Sbjct: 353 NRRNHADAHQRVVLRVNVDAPHLGPVSIFVSHY---------------ALDETARQRGCV 397 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKD 242 + W K+++ + GD N + + + + + Sbjct: 398 ETWEFIKEDNSSTQLFLGDLNAEPDTPCIRFLSGKAPLLEATTDGVYDAWLELHPEPRPG 457 Query: 243 SRCNANKNLRNKI------------------------PIDYFVMDQNAYKFLIQESFSEI 278 S C + IDY +M + S Sbjct: 458 SNCAKFSGNAWRTADIRKDEERDVGLTFNTFGEQLVKRIDYALMRHPHMD-VTVCSIDVF 516 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 ++ SDH + ++ Sbjct: 517 PREREEHP-----ASDHLGLVLEL 535 >gi|294673423|ref|YP_003574039.1| endonuclease/exonuclease/phosphatase family protein [Prevotella ruminicola 23] gi|294471767|gb|ADE81156.1| endonuclease/exonuclease/phosphatase family protein [Prevotella ruminicola 23] Length = 358 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 37/334 (11%), Positives = 86/334 (25%), Gaps = 87/334 (26%) Query: 1 MIRKYVLALVFFLVPCTASVAQKV----------------RLVSWNINTLSEQEGVSLWK 44 M R + + + C + + ++ ++N+ + + + Sbjct: 66 MRRFHWAFIPLIAIMCCIPYSGTIYQFGSLDEHADIKPGIKIATYNVAMFGRETSGFIAQ 125 Query: 45 NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104 + + K D+ QE + K +++ ++ H Sbjct: 126 D-----------ILSEMKKQKVDVACFQEYNDQSGDKK--NSDSYKEYFPYMAQGEHD-- 170 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164 + + + V ++ +S A+ V G I V + HL Sbjct: 171 ---------MVIYSRYPIVKSKNMNFEMTNNS--------AMWAEVNYKGTVIRVYNAHL 213 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-------------------TQKKESLVPF 205 ++ ++ + ++ L + + P Sbjct: 214 ETTGINGTMYRAGKLMSQGMDIESNALLRALYGNYTIGMIARSGQANVLAQDMRNCERPI 273 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 ++ GDFN N D + F + + + K+ IDY Sbjct: 274 IVCGDFNDVPYSYVYNTML------GDKVDGFTECGSGFMYTFRGGKKKVRIDYIF---- 323 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + R SDH P+ Sbjct: 324 ----------HDKTFLGLSYYKRELSYSDHNPVF 347 >gi|291276452|ref|YP_003516224.1| putative exodeoxyribonuclease [Helicobacter mustelae 12198] gi|290963646|emb|CBG39478.1| putative exodeoxyribonuclease [Helicobacter mustelae 12198] Length = 250 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 87/306 (28%), Gaps = 82/306 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL+SWN+N L + + +DADI +QE + A Sbjct: 1 MRLISWNVNGLRACMNKGFM---------------DFFRQIDADIFCIQESKMHPDQADF 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++++ +S V VL + PL D Sbjct: 46 V-FDGYHGYWNSAEKKGYSG-----------------VVVLSKQEPLCVEYDMG------ 81 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT--QKKES 201 +E + K+ V+ F ++ L + QW D++ + E Sbjct: 82 ------IEHHDKEGRVICAEYPDFYLINVYTPNSKRELERLEYRMQWEDDFLNFLKNLER 135 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P +I GD N + T+ N + F Sbjct: 136 KKPLIICGDLNVAHKEIDLKNPKTNRRNAGFTDEEREKMTTLLENGFIDTFRYFYPDLEG 195 Query: 247 ANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 A IDYF+ + K LI+ + SDHCP Sbjct: 196 AYSWWSYMGRARQNNTGWRIDYFLCSEILQKRLIEAKIYSEIL-----------GSDHCP 244 Query: 298 ISIDYD 303 + + Sbjct: 245 VGLVIS 250 >gi|301103630|ref|XP_002900901.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262101656|gb|EEY59708.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 443 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 52/363 (14%), Positives = 98/363 (26%), Gaps = 74/363 (20%) Query: 14 VPCTASVAQKVRLVSWNIN--TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 + + QK+ +V NI L+ + S + +L + + LDAD++ L Sbjct: 73 LTPSRLSKQKITVVQLNILASNLATRNHFPYVVESSLNWENRKMILLRQLEALDADVLCL 132 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 +E+ Y K + +R H S H + K + + + + Sbjct: 133 EELSDYWTFFKPELLDRGYESVYVKRPSIHVSNWSGEKKHDGCGIFYKKDKFELKEFEAV 192 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL-------ENTYSPSCSLL 184 D R +++ + + + + E S + Sbjct: 193 NYHDPHDRVAVLALLKMRHFAQFVLVGCTHLWWNAKKVDHQMAELYELEEEVLRMSSDVR 252 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-------------------DDFW 225 + + L D +T + VP V+ GDFN + Sbjct: 253 DKYERELADTVTGQTS--VPIVLCGDFNNSPESPIYEYMENSFMQKPNLEGLSEVFRSAY 310 Query: 226 KTIDPNDSLIRFPK-------------EKDSRCNANKNLRNKIPIDYFVMDQN------- 265 PN +K + N R IDY ++ Sbjct: 311 AFYKPNALASALEHSDEELQSLKVEEGKKAEPPHTTVNFRRCWTIDYIWYSKSSLVPSRV 370 Query: 266 --------AYKFLIQESFSEILYNEDDIKSRGKRL----------------SDHCPISID 301 ++ L D + G+ SDH PI + Sbjct: 371 LEIPPESELRAEDGPGNWFNRLAMSDSLNRSGRLPSSLHGNYNGIPNSVFGSDHVPIMAE 430 Query: 302 YDF 304 ++F Sbjct: 431 FEF 433 >gi|210135690|ref|YP_002302129.1| exodeoxyribonuclease III [Helicobacter pylori P12] gi|210133658|gb|ACJ08649.1| exodeoxyribonuclease [Helicobacter pylori P12] Length = 250 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 80/303 (26%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + ++DAD+ +QE + + + Sbjct: 1 MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ + K + G R Sbjct: 42 QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVN----YGINMEEHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++++++ + S + + + L+ Sbjct: 91 -----VITCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALEL--------KK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N N + + + F ++ A Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFSELLNAGFIDTFRYFYPNKEKAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ L D + + SDHCP+ Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTCLK-----------DALIYKDILGSDHCPVG 246 Query: 300 IDY 302 ++ Sbjct: 247 LEL 249 >gi|182435048|ref|YP_001822767.1| putative exonuclease [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463564|dbj|BAG18084.1| putative exonuclease [Streptomyces griseus subsp. griseus NBRC 13350] Length = 259 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 77/303 (25%), Gaps = 68/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++N+N T+ L + ++ D++ +QE Sbjct: 1 MRIATYNVN----------------SITARLPRLLAWLESSGTDVLCVQETKCTAE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R ++ + +A+ + + L + R Sbjct: 41 ------QFPAEALREAGYASAVNATGRWNGVALLSRVGLSDVVTG-LPDGPEYEGVQEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +++ + ++ Y + + L+ + + Sbjct: 94 A-----ISATCGPLRLWSVYVPNGREVEHAHYAYK------LRWLEALRKAVAADAAKAL 142 Query: 204 PFVIAGDFNRKINYLGNNDDFW--------------KTIDPNDSLIRFPKEKDSRCNANK 249 PF + GDFN D + L A Sbjct: 143 PFAVLGDFNVAPTDEDVWDPALFEGATHVTPAERAALAALEAEGLSEVHPRPLKYDRAYT 202 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID + + D + +GK SDH P+ + Sbjct: 203 FWDYRELRFPKNKGMRIDLTFGNAPFTAAVKDSYV-------DREERKGKGASDHAPVVV 255 Query: 301 DYD 303 D D Sbjct: 256 DLD 258 >gi|146320518|ref|YP_001200229.1| 3'-exo-deoxyribonuclease [Streptococcus suis 98HAH33] gi|145691324|gb|ABP91829.1| putative 3'-exo-deoxyribonuclease [Streptococcus suis 98HAH33] Length = 276 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 41/307 (13%), Positives = 84/307 (27%), Gaps = 57/307 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 ++L+SWNI++L+ + + R + DADI+ +QE S K Sbjct: 1 MKLISWNIDSLNAALTAESPRALLSR------AVIDTLVTEDADIIAIQETKLSDKGPTK 54 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + F + S + + KN ++P +GA + G Sbjct: 55 KHLEILESYFPGICQGPGRSSVEPARTCYAGTLFLYKNHLTPTITFPEIGAPTTMDSEGR 114 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 ++ + +V ++ + + L +S Sbjct: 115 ------IITLEFDDFYVTQVYTPNAGDGLKRLADRQIWDVQYADYLAKL--------DSH 160 Query: 203 VPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P + GD+N + + + F NA Sbjct: 161 KPVLATGDYNVAHKEIDLANPASNRQSPGFTDEERQGFTNLLAKGFTDTFRHLHGDVLNA 220 Query: 248 NKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDY+++ + + + + DH P Sbjct: 221 YTWWAQRSRTSKINNTGWRIDYWLVSDRIADKVSKSDMIDSGARQ-----------DHTP 269 Query: 298 ISIDYDF 304 I ++ F Sbjct: 270 IVMEISF 276 >gi|3236320|gb|AAC23652.1| DNase gamma [Homo sapiens] Length = 305 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 95/291 (32%), Gaps = 34/291 (11%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 A +R+ S+N+ + E S + + ++ + K DI+ + E+ N Sbjct: 17 SALAMRICSFNVRSFGE---------SKQEDKNAMDVIVKVIKRC--DIILVMEIKDSN- 64 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIH------TAIAVRKKNVRVLQQSYPLLGA 133 ++ P + ++ R I ++ S+ A ++K V V ++SY Sbjct: 65 -NRICPILMEKLNRNSRRGITYNYVISSRLGRKTYKEQYAFLYKEKLVSV-KRSYHYHDY 122 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 +D + +R + + + I S + + + D Sbjct: 123 QDGDADVFSREPFVVWFQSPHTAVKDFVIIPLHTTPET--------SVKEIDELVEVYTD 174 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 + K F+ GDFN +Y+ + + + +++ Sbjct: 175 VKHRWKAEN--FIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCA 232 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 I + Q ++ +S S + + + + L SDH P+ Sbjct: 233 YDRI--VLRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKL 281 >gi|327349957|gb|EGE78814.1| DNA lyase Apn2 [Ajellomyces dermatitidis ATCC 18188] Length = 642 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 44/344 (12%), Positives = 79/344 (22%), Gaps = 84/344 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 VRL +WN+N + W R + + LDADIV QE + + Sbjct: 2 VRLTTWNVNGIRNPFSYHPW-----REKRSFEAM---FDALDADIVIFQETKIQKKDLQD 53 Query: 82 KVFPKNTWCIFYS-TERLINHSKRDSNND-----------IHTAIAVR----KKNV-RVL 124 + N W F+S + +S T I Sbjct: 54 DMVLVNGWDCFFSLPKYKKGYSGVVIYTRNSKCCPIRAEEGITGILYLPASVSPFPSPTS 113 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS-- 182 + P + A ++ + + + +F + Sbjct: 114 FRDLPEEAQIGGYPTAEQLALSDVDASTLDSEGRCMILEFPAFVLIGVYCPANRDETRDG 173 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS--------- 233 + L + ++ GD N + + + + N + Sbjct: 174 FRTGFVNILDARVRNLVAMGKRVIVMGDLNICGSEIDSARALEEIRKGNLTDSEFVSAPV 233 Query: 234 --------------------------LIRFPKEKDSRCNANKNL---------RNKIPID 258 + K R ID Sbjct: 234 RRVFNQLVYGGKVIGDRDQGRETPILVDLCRKYHPDRPGMYTCWEQRVNARPGNYGSRID 293 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 Y + D+ + + G SDHCP+ D Sbjct: 294 YVLCDKRMEDWFSASNIQ-----------EGLMGSDHCPVFADL 326 >gi|298376245|ref|ZP_06986201.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] gi|298267282|gb|EFI08939.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] Length = 304 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 91/331 (27%), Gaps = 55/331 (16%) Query: 2 IRKYVLALVFFLVPCTASVA-----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 +RK L + C A A V++ S+NI L+ G + Sbjct: 1 MRKISEILCCVAILCCALSACSDKQATVKVSSFNI-WLNTLGGKLPP-----------SQ 48 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + + DIV +QE ++ ++ + E + N I Sbjct: 49 TAKVIEASQTDIVGIQE-------GHIYEEDGIKHDHVPEIAESLGFHLFNQGEGHYILS 101 Query: 117 RKKNVRVLQQSY--PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 R V Y + KD F N + + + I + F+D+ E Sbjct: 102 RYPVVDSTASRYGVKIQVGKDKFCWMFNCHLYYI----PYQPYQLNGIPYGDYPFIDTEE 157 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD----------- 223 + ++ + I Q + P + GDFN Sbjct: 158 EAVRFANEARREEVTRYQKDIQQVMKEGYPVFLTGDFNEPSFLDWTQRAADADIHKIKVE 217 Query: 224 -----FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQE 273 + I NDS ++ S +D+ + + + Sbjct: 218 WPATKAFSEIGMNDSYRTIHPDEVSTPGYTWTPVPSEQEILDRLDFVLYSG----CKVTD 273 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 SF SDH ++ ++F Sbjct: 274 SFITGESEATSDVVVSPYPSDHRMVTSCFNF 304 >gi|168031565|ref|XP_001768291.1| predicted protein [Physcomitrella patens subsp. patens] gi|162680469|gb|EDQ66905.1| predicted protein [Physcomitrella patens subsp. patens] Length = 614 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 45/353 (12%), Positives = 95/353 (26%), Gaps = 68/353 (19%) Query: 18 ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 S + ++S+N+ + + + S T L + ADI+ LQE+ Sbjct: 254 TSSSGTFTVLSYNVLSDLYATSDMYSYCPPWALAWTYRKQNLLREIVAYHADILCLQEVQ 313 Query: 76 SYNAVAKVFPK---NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 S + P+ + + Y + ++ D R + V + Sbjct: 314 SDHYEEFFAPELEKHGYTGVYKKKTGEVYTGSVYVIDGCATFFRRDRFSLVKKYEVEFNK 373 Query: 133 AKDSFSRAG---NRRAVELLVEINGKKIWVLDIHLKSFCFLDS----------------L 173 A S S A ++ + + + V+ + F DS Sbjct: 374 AAQSLSEALVPTTKKVALSRLLKDNVALIVVLEARDTGGFTDSQGTPGKRGQLLCVANTH 433 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGN------------ 220 + + Q L + + + +P ++AGDFN + Sbjct: 434 IHANQELKDVKLWQVHTLLKGLEKIAASADIPMLVAGDFNSIPGSAPHCLLSTGRVDPTH 493 Query: 221 --------------------------NDDFWKTIDPNDSLIRFPKEKDSRC----NANKN 250 F + ++ + ++ D N Sbjct: 494 PDLQVDPLNILRPASKLCHSLSLVSAYASFGRMNGLGPTVEKRMRQMDPTTSEPQFTNCT 553 Query: 251 LRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +DY + + E E +D + SDH + ++ Sbjct: 554 RDFLGTLDYIFYTADSLTVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEF 606 >gi|33598562|ref|NP_886205.1| putative endonuclease [Bordetella parapertussis 12822] gi|33603508|ref|NP_891068.1| putative endonuclease [Bordetella bronchiseptica RB50] gi|33574691|emb|CAE39344.1| putative endonuclease [Bordetella parapertussis] gi|33577632|emb|CAE34897.1| putative endonuclease [Bordetella bronchiseptica RB50] Length = 262 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 91/306 (29%), Gaps = 74/306 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ S N+N + + L+ + +AD++ LQE + + Sbjct: 2 LRITSLNLNGIRS---------------AFRKGLQPWMTAHNADVLCLQEIKVSHDDLTD 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + + +S + +R RV+ G A Sbjct: 47 ELRHPPGYTGHFHHAEKKGYSG--------VGMYLRAGAERVVA------GFDCEEFDAE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + K + V+ +L S D + L + + +++ Sbjct: 93 GRI-----LRADWKDLSVISAYLPSGSSGDERQQAKYRFLDQFGPWLDGL---MAEHRKT 144 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 FVI GD+N L + + + ++ D R + Sbjct: 145 GREFVICGDWNIAHKEIDLKNWKGNQKNSGFLPEERAWLTEVFDRRGFVDVFRKLDERAD 204 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + + S + +R SDH P Sbjct: 205 QYTWWSNRGQAWAKNVGWRIDYQIATPGIAERARATSI-----------YKDERFSDHAP 253 Query: 298 ISIDYD 303 +++DYD Sbjct: 254 LTVDYD 259 >gi|282877708|ref|ZP_06286523.1| exodeoxyribonuclease III [Prevotella buccalis ATCC 35310] gi|281300280|gb|EFA92634.1| exodeoxyribonuclease III [Prevotella buccalis ATCC 35310] Length = 249 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 86/303 (28%), Gaps = 79/303 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L D+ +LDAD LQE A Sbjct: 1 MKFISWNVNGLRAC------------VKKDFEA---SFHHLDADFFCLQETK-MQAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ ++ ++ A+ K+ + + D R Sbjct: 45 LQFEGYQSYWN----------YADKKGYSGTAIYTKHTPLNVTYGLGIDEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ +++ + Q + ++ Q +++ Sbjct: 91 -----VITMEMDDFFLITVYVPN-------SQDELRRLDYRMQWEDDFRAYVMQ-LDAIK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P +I GD N + + N + F + Sbjct: 138 PVIICGDLNVAHEEIDLKNPKTNRRNAGFTDEEREKMTILLNNGFVDTFRHLYPEQV-TY 196 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ + + L+ + SDHCP+ Sbjct: 197 SWWSYRFRAREKNAGWRIDYFLISERLKERLVDAKIHTEIL-----------GSDHCPVE 245 Query: 300 IDY 302 ++ Sbjct: 246 LEL 248 >gi|56697332|ref|YP_167698.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria pomeroyi DSS-3] gi|56679069|gb|AAV95735.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria pomeroyi DSS-3] Length = 233 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 40/283 (14%), Positives = 76/283 (26%), Gaps = 55/283 (19%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +Q +RL S+NI + + Q + A I LQE Sbjct: 3 SQTLRLASYNIQKCVGLD-----------LRRQPRRILQVLDAMGARIAVLQEADKR-LP 50 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + + + ++++ S A+ + + L ++ L Sbjct: 51 PRPAALPHFVLEEAGWQVVDLGGAGSLGWHGNAVIWKGAGITQLASAHHDLPG------F 104 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R AV + + + VL +HL + Q L + + Sbjct: 105 EPRGAVRVEFDTPIGPLRVLGLHLGLLP-------------ASRRDQIVHLAHDLERLPP 151 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 +P V AGDFN + + P + + R +D Sbjct: 152 --MPTVWAGDFN-----EWSRQPVLDHLAPMLRFLPARP-------SFPAPRPLGALDRI 197 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + SDH P+ D Sbjct: 198 AHSPELSA----------VAHGVFAERPAPIASDHLPVWADLT 230 >gi|260432325|ref|ZP_05786296.1| exodeoxyribonuclease III [Silicibacter lacuscaerulensis ITI-1157] gi|260416153|gb|EEX09412.1| exodeoxyribonuclease III [Silicibacter lacuscaerulensis ITI-1157] Length = 262 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 30/308 (9%), Positives = 68/308 (22%), Gaps = 75/308 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAV 80 L +WNIN ++ + + D++ LQE S Sbjct: 2 PFTLATWNIN----------------SVRLREPIVLKLLQEESPDVLCLQECKSPVDKIP 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + F + + + +A+ + G + Sbjct: 46 TEGFAELGYTHMI-----------ARGQKGYNGVAILSRLPITDLGDRDFAGLGHARH-- 92 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 V +E V+ + D + + ++DW E Sbjct: 93 -----VAGQLENG-----VIIHNFYVPAGGDVPDREVNEKFGQKLDYLTDMRDW--FHAE 140 Query: 201 SLVPFVIAGDFNRKINYLG--NNDDFWKTID-------------PNDSLIRFPKEKDSRC 245 ++ GD N ++ K + + ++ Sbjct: 141 KPQKSILVGDLNIAPREDDVWSHKQLLKVVSHTPIEVAHLAETQDAGGWVDITRQDIPEG 200 Query: 246 NANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ + ++ SDH Sbjct: 201 QLYSWWSYRARDWDAANKGRRLDHVWATPDISNAGHSS-------RILRDARGWEKPSDH 253 Query: 296 CPISIDYD 303 P+ +D Sbjct: 254 APVFATFD 261 >gi|212691340|ref|ZP_03299468.1| hypothetical protein BACDOR_00832 [Bacteroides dorei DSM 17855] gi|265751906|ref|ZP_06087699.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|212666093|gb|EEB26665.1| hypothetical protein BACDOR_00832 [Bacteroides dorei DSM 17855] gi|263236698|gb|EEZ22168.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 353 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 34/311 (10%), Positives = 87/311 (27%), Gaps = 78/311 (25%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + ++++V++N+++ + + + D++ QE Sbjct: 94 PTKYANENRLKIVTYNVHSFGNEITGFS-----------AKEFAEMMNKEETDVLCFQEY 142 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + +NT+ + S + A+ + Q+ Sbjct: 143 RGNGDFTEQDLQNTYA----------KTFPYSFIPEGLSQAIYSRYPIKQSQTIEFPNTN 192 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD----------------------S 172 + A+ +++ G I ++++H+++ F Sbjct: 193 N--------GAIWADLDVKGMTIRIINVHMQTTNFDRMRSKAAQARGAQDEEQERAIYLD 244 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 + + + + QA+ + I + P ++ GDFN + + Sbjct: 245 YSDNFRENTVRRAGQAEQISSLINATE---YPLIVCGDFNDPPG-TFTYETLKSGLKDG- 299 Query: 233 SLIRFPKEKDSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + IDY L + I Y+ Sbjct: 300 ------FQTAGEGYGATYRGFHHLLRIDYLFHS----TLLEGIKYKVIPYD--------- 340 Query: 291 RLSDHCPISID 301 +SDH P+ ++ Sbjct: 341 -MSDHNPVYLE 350 >gi|148886825|sp|A2Q9L0|CCR4_ASPNC RecName: Full=Glucose-repressible alcohol dehydrogenase transcriptional effector; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase gi|134055362|emb|CAK43916.1| unnamed protein product [Aspergillus niger] Length = 656 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 39/350 (11%), Positives = 99/350 (28%), Gaps = 64/350 (18%) Query: 15 PCTASVAQKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + S +K+ ++S N S + V L+ ++ D+DI+ LQ Sbjct: 292 SSSNSPTEKITVLSHNALCDSSATPSHFGYTPSRVLSWEFRRELILSELRSHDSDIICLQ 351 Query: 73 EMG----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 E+ + ++ + +++ R + + ++ + A + +L + Sbjct: 352 EIDQGSYNGFFREQLAYNDYKGVYWPRGRAMGMQEEEAKSVDGCATFFKGSKFILLDKQM 411 Query: 129 PLLGAK-----------DSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSL 173 G D ++R + + +++ + G + V++ HL + + Sbjct: 412 INFGQTAVRRPDAKGQDDIYNRLWQKDHIAVVIFLENRLTGSRFIVVNAHL---YWDPAF 468 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLV-------------------PFVIAGDFNRK 214 ++ ++L ++ L + + P + GDFN Sbjct: 469 KDVKLIQTAILMEEITKLSEKYAKFPPCTDKTAFRFSEAEVEYASGDQIPLFMCGDFNSA 528 Query: 215 INYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNK 254 N + + F + N K Sbjct: 529 PGSAAYNLVAHGRLTESHPDLEKRLYGNLSRVGMTHPFKLKSAYNSIGELSFTNYTPDFK 588 Query: 255 IPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +DY + + + + SDH + ++ Sbjct: 589 DILDYIWYTSNTLHVSALLGEVDKEYLQKVPGFPNFHFPSDHVALFAEFT 638 >gi|15604519|ref|NP_221037.1| exodeoxyribonuclease III (xthA2) [Rickettsia prowazekii str. Madrid E] gi|3861213|emb|CAA15113.1| EXODEOXYRIBONUCLEASE III (xthA2) [Rickettsia prowazekii] gi|292572307|gb|ADE30222.1| Exodeoxyribonuclease III [Rickettsia prowazekii Rp22] Length = 269 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 82/301 (27%), Gaps = 66/301 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + LLR + + DI+ LQE+ Sbjct: 1 MKIATWNIN----------------SIKTRLNLLRNFLSKENPDILLLQEIKCETE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + + + +A+ K + ++++ R Sbjct: 41 ------KFPFNELSDLPYHFYVHGQKSYNGVAIISKFP----ADQIIKDFQNNYCNDQAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E+ + ++ ++ + F+ S + ++++ KK Sbjct: 91 F-LEIKLSSPIGYSNIISLYAPNGSFVGS------NKFVEKLKFYDNFINYLSTKKSCYE 143 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTID-------------PNDSLIRFPKEKDSRCNANKN 250 +I GDFN + N + Sbjct: 144 KTIIGGDFNIAPFDIDVYSKVLTETTCCTEVEQKKLRTILNSGFEDLYRLMHPDKQEFSW 203 Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + + ID + N +L + D K+ SDH PI Sbjct: 204 WDYRAGCFEQNKGMRIDMILGCNNTIDYLERCYM-------DYNLRTQKKPSDHIPIIAS 256 Query: 302 Y 302 + Sbjct: 257 F 257 >gi|89097572|ref|ZP_01170461.1| Exodeoxyribonuclease III [Bacillus sp. NRRL B-14911] gi|89087868|gb|EAR66980.1| Exodeoxyribonuclease III [Bacillus sp. NRRL B-14911] Length = 251 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 32/302 (10%), Positives = 73/302 (24%), Gaps = 78/302 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N + + +ADI +QE Sbjct: 1 MKLVSWNVNGIRACVKKGF---------------LDFFMEENADIFCIQESKLQEG-QIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ +S G + R Sbjct: 45 LNLDGYHQYWNYAEKKGYSGTAVFTKEKPLYVS--------------YGIAGRETEPEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + ++L+++ + + + + L+ Sbjct: 91 S-----LTLEFENFYLLNVYTPNSKRDLARLPYRLEWEDEIREYILELEQ--------KK 137 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + ++ + F + A Sbjct: 138 PVILCGDLNVAHLDIDLKNARSNRGNSGFTDEERGKMTSLLSEGFVDSFRYLYPEQEGAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ + ++ SDHCPI Sbjct: 198 TWWSYMAKVRERNIGWRIDYFIVSDKLKEHILDSKI-----------YCDIMGSDHCPIM 246 Query: 300 ID 301 ++ Sbjct: 247 LE 248 >gi|327275221|ref|XP_003222372.1| PREDICTED: endonuclease/exonuclease/phosphatase family domain-containing protein 1-like isoform 1 [Anolis carolinensis] Length = 556 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 33/296 (11%), Positives = 79/296 (26%), Gaps = 37/296 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+ S V N R TLL K ++ +QE+ +A+ K Sbjct: 252 LRVATWNLQNCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELVDRDALEKF 302 Query: 84 FPKNTWCIFYSTERLINHSK------------RDSNNDIHTAIAVRKKNVRVLQQ-SYPL 130 + + + + ++ L+ + Sbjct: 303 CIELNQPTLPNIRKWKGSRGSWKCVVSENTSSHPQKSVEYSGFLWDTTAGIELKDIASQE 362 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + R ++ + ++++HL + S Sbjct: 363 NAQTNGNGRHPYTEPYIAHFKVGMNDLTLVNLHLVPLPSVGDNAVKNHNSHKS-----AA 417 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + + + +I GDF + + ++ + + + KN Sbjct: 418 FAHTLQETLKGEKDVIILGDFGQAPDCSEHD------VLRKEKFHHLVPVTTFTNISTKN 471 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302 + +D + ++ K I S HCP+ ++ Sbjct: 472 PQGSKSLDNIWISRSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASSHCPVLAEF 527 >gi|326801323|ref|YP_004319142.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] gi|326552087|gb|ADZ80472.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] Length = 338 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 41/293 (13%), Positives = 87/293 (29%), Gaps = 40/293 (13%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEMGSYNAV 80 + ++++NI L + T + + + + L D DIV +QE +YN+ Sbjct: 71 GEFSVITYNIAGL--------PQLICSAVTERSSSIAEIGRRLNDYDIVHVQEDFNYNSF 122 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++YS +K + K P + Sbjct: 123 ----------LYYSGNEHPYKTKTKGGVPFGDGLNTLSKYRITEIHRIPWNNCTGA-DCL 171 Query: 141 GNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 + +E+ G I ++H + + L ++I + Sbjct: 172 TPKGFTFSKIEVGKGVFIDFYNVHANAADDPAAAAARRKN--------MIQLSNYIKEH- 222 Query: 200 ESLVPFVIAGDFNRK--INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR----- 252 ++ GD N + D + + + K+ Sbjct: 223 SGDRAVIVMGDLNAHFCYEHDNIRDLLAQNGLKDAWVTLKAKDSFPAFKKFVKEDILKLT 282 Query: 253 -NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + ID + +A L ++ ++ G LSDHCP+S+ + + Sbjct: 283 DDCESIDKILFRSSADLLLTPNAYRFENEKFNN--KEGIPLSDHCPVSLSFSW 333 >gi|289423957|ref|ZP_06425750.1| exodeoxyribonuclease III [Peptostreptococcus anaerobius 653-L] gi|289155734|gb|EFD04406.1| exodeoxyribonuclease III [Peptostreptococcus anaerobius 653-L] Length = 275 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 80/305 (26%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL+SWNI++L+ + + R + + +LD DI+ LQE Sbjct: 1 MRLISWNIDSLNAALTSDSARALLSR------EVLKTIIDLDPDIIGLQETKLSVKGLTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S + + K ++ SYP +GA Sbjct: 55 KHIEIIEEMLPDYEYVYRSSVEPARKGYAGTMFLYKKGMNVKVSYPEIGAP--------- 105 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ G+ I + +++ + Sbjct: 106 ----TTMDFEGRIITLELDDCYVTQVYTPNAGDGLRRLEERQVWDCKYMEYLKT-LDEDK 160 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N + + + + F + A Sbjct: 161 PVLACGDYNVAHNEIDLANPASNHMSPGFTDEERAGFTNLLGAGFVDTFRHKNGMVEGAY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY+++ + + + + DH PI Sbjct: 221 SWWAQRVKTSKINNTGWRIDYWLVSERVADRVESSIMVDSGPRQ-----------DHTPI 269 Query: 299 SIDYD 303 +D + Sbjct: 270 LMDIN 274 >gi|213405473|ref|XP_002173508.1| DNA-(apurinic or apyrimidinic site) lyase [Schizosaccharomyces japonicus yFS275] gi|212001555|gb|EEB07215.1| DNA-(apurinic or apyrimidinic site) lyase [Schizosaccharomyces japonicus yFS275] Length = 554 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 41/322 (12%), Positives = 89/322 (27%), Gaps = 63/322 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 +R+++WN+N + W++ + LDADI+ +QE+ Sbjct: 1 MRILTWNVNGIQNPFNYGQWRSKKSYKE--------VFETLDADIICVQELKAQKQGFPE 52 Query: 82 KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL--------- 131 + + +++ +S + + + P Sbjct: 53 QFALIEGYDAYFTFPLEKKGYSGVGVYVKKSLTVPCKAEEGITGILPVPDRHYCYKDAPE 112 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + + +A E L++ G+ I +LD L + N+ L Sbjct: 113 DEQIGYYPVNLDKATERLIDSEGRCI-LLDFQLFVLIGVYCPVNSGEKRLKFRRLFYNAL 171 Query: 192 KD-WITQKKESLVPFVIAGDFNR------------------KINYLGNNDDFWKTIDPND 232 +D I +E+ ++ GD N + + + + P+ Sbjct: 172 RDRIIRLTQEAKRNVILLGDINILRDELDTADNKDIQKEQFDESIRESREWVRGMLQPHP 231 Query: 233 SLIRFPK-----------EKDSRCNANKNL-RNKIPIDYFVMDQNAYKFLIQESFSEILY 280 + N IDY + ++ + Sbjct: 232 EGLLIDTTRHRHPVRRGMFTCWNTRLNTRPTNFGTRIDYICISPALLPWMQDANIM---- 287 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 SDHCP+ +D+ Sbjct: 288 -------PEIMGSDHCPVFLDF 302 >gi|159487996|ref|XP_001702008.1| protein of endonuclease / exonuclease / phosphatase family [Chlamydomonas reinhardtii] gi|158271465|gb|EDO97283.1| protein of endonuclease / exonuclease / phosphatase family [Chlamydomonas reinhardtii] Length = 573 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 43/369 (11%), Positives = 97/369 (26%), Gaps = 70/369 (18%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 V ++V + P S A + ++++N+ + ++ + + L + Sbjct: 201 VRSMVQMVPPSQQSNAGRFTILTYNLLADLYAKADFSNSCPPWCLHWHYRKRNLLRELLA 260 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 ADI+ LQE+ S + V P+ + + + N A + R Sbjct: 261 HKADILCLQEVQSDHYVDFWAPELQRAGYVAIYKKKTTEIYTDNKYAIDGCATFFRRDRF 320 Query: 124 LQQSYPL-------LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL------ 170 L + + ++A + + + + ++ Sbjct: 321 SLVKKYEVEFNKAALSLAEGMTNPQQKKAALNRLLKDNVALIAVLEAIEPGTPDAGNRRT 380 Query: 171 -----DSLENTYSPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGN---- 220 ++ + + Q L + + + +P ++AGDFN + Sbjct: 381 LICVANTHIHANPELNDVKIWQVHTLLKGLEKIAASADIPMLVAGDFNSVPGSPAHCLLV 440 Query: 221 ------------NDDF----------------------WKTIDPNDSLI----RFPKEKD 242 ND + + L R + Sbjct: 441 KGKIDSNMMDSANDPLHLLKDQKMSHSLPLSSAVAYLHDAPLSADGRLYKQRQRLDAKHH 500 Query: 243 SRCNANKNLRNKIPIDYFVMD----QNAYKFLIQESFSEILYNEDDI---KSRGKRLSDH 295 N K +DY Q + +D + SDH Sbjct: 501 EPLFTNLTKDFKGTLDYIFYTTTSLQPTAILELPTEVDVATRPDDTTNLSLPNQQYSSDH 560 Query: 296 CPISIDYDF 304 I ++ + Sbjct: 561 LAIMAEFQY 569 >gi|169634777|ref|YP_001708513.1| catabolite repression control protein [Acinetobacter baumannii SDF] gi|169794343|ref|YP_001712136.1| catabolite repression control protein [Acinetobacter baumannii AYE] gi|260557895|ref|ZP_05830108.1| exodeoxyribonuclease III [Acinetobacter baumannii ATCC 19606] gi|169147270|emb|CAM85129.1| catabolite repression control protein [Acinetobacter baumannii AYE] gi|169153569|emb|CAP02744.1| catabolite repression control protein [Acinetobacter baumannii] gi|260408686|gb|EEX01991.1| exodeoxyribonuclease III [Acinetobacter baumannii ATCC 19606] Length = 280 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 82/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +R+VS N+N L L ++ + DAD+V +QE ++ + Sbjct: 20 LRVVSINVNGLRSSVTKG---------------LLEWLEQSDADVVCMQESRITHEQWTE 64 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 F W ++ A+ + V + DS R Sbjct: 65 KFRPEGWHTHLFPAERAGYA----------GTAIYSRLPFVSIKDGLGFELADSQGRF-- 112 Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++ + + ++L S + + + + Q ++ Sbjct: 113 ---ISAEFDLGLSHPVHIASLYLPSGSSGE-------EAQARKDLFLGEYAKILKQWRDE 162 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 +I GD+N + + + I + + + Sbjct: 163 NKSIIICGDYNIVHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDELGYVDTFRVVRTEAE 222 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + + + + SDH P Sbjct: 223 LYSWWSNRGQARAKNVGWRIDYHACSPDWKARTVNAWV-----------YKDQWFSDHAP 271 Query: 298 ISIDY 302 + IDY Sbjct: 272 VIIDY 276 >gi|118373801|ref|XP_001020093.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila] gi|89301860|gb|EAR99848.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila SB210] Length = 271 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 41/289 (14%), Positives = 84/289 (29%), Gaps = 32/289 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL-RQYAKNLDADIVFLQEMGSYNAVAK 82 + WN S + + + +ADI+ L+E+ + Sbjct: 5 FTISQWNTLADSLSDSFPKCDLQYLKWDYRSQNIKNHLLNEANADIICLEEVDHPVFFSS 64 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + +F+ + ++K + Q+ + Sbjct: 65 FLDQTHEIVFHKKPEGEDGQLVAI---------SKQKFQILKHQAIQYKSGDGKKDMNQS 115 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT---QKK 199 ++ +L + K+ +L HLK+ + Q + + + I Q Sbjct: 116 YWSLIILDKQIDKQFLLLVTHLKA----------KKQFEDIRLLQVEQILEHIQKIQQDY 165 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP--- 256 +P +IAGDFN + Y + I L ++K K Sbjct: 166 SKDIPILIAGDFNAEPTYSCI-----QKIKQQGFLKSAYEDKGLTFTTYKVREPNDVQIR 220 Query: 257 -IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY QN+ + L ++ + DH ++ + F Sbjct: 221 MIDYIFYTQNSIELLSIKNLPTQDQIGPNGLPNQTFSGDHLSLTATFKF 269 >gi|326927929|ref|XP_003210140.1| PREDICTED: deoxyribonuclease gamma-like [Meleagris gallopavo] Length = 286 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 81/303 (26%), Gaps = 51/303 (16%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 +L V F + C + +R+ S+N+ + + + + Sbjct: 1 MLFFVLFSLLCFNP-SLSLRICSFNVRSFGA---------AKIARAEVLDAVVKIISRC- 49 Query: 66 ADIVFLQEMGSYN------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 DI+ L E+ V ++ + + + R S + + A R+ Sbjct: 50 -DIMLLMEIKENKNRTCPLLVQQLAGQTKGKREEYSCVVSGRLGRKSYKEQY-AFLYRRN 107 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 V V +Q+Y + A +R + + + I + E Sbjct: 108 LVSV-KQTYQYPDTQPGDEDAFSREPFIVWFQSPKTTVEEFAIVPLH----TAPEMAVRE 162 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 L + W F+ GDFN +Y+ + N + Sbjct: 163 IDELYDVYLDIKQHW------DTKNFIFMGDFNAGCSYVPRKHWKNIRLRTNLEFVWLIS 216 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + + + Y + +SDH P+ Sbjct: 217 DTNDTT---------------------VRRSTSCPYDRPRYLGVSLPREALGVSDHFPVE 255 Query: 300 IDY 302 + Sbjct: 256 FEL 258 >gi|156398432|ref|XP_001638192.1| predicted protein [Nematostella vectensis] gi|156225311|gb|EDO46129.1| predicted protein [Nematostella vectensis] Length = 506 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 39/331 (11%), Positives = 92/331 (27%), Gaps = 82/331 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +++++WNIN L R + L+ + +L+AD++ QE + + + + Sbjct: 1 MKILTWNINGL--------------RAVTREKKLKDFLNSLEADVMCFQETKITRDMLEE 46 Query: 83 VFPK-NTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS-- 138 + + F+S R+ +S + T ++ + + P +G Sbjct: 47 ATCMADGYTAFFSFSRVKSGYSGVATFCKDSTTPLAAEEGLTSQLSASPDIGFYGDDEEF 106 Query: 139 --------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + R + +G + +++++ + + + Sbjct: 107 TSDQLSRLDSEGRTILTEHTLSSGGTVVIINVYCP------RADMENEDRIQFKLEFHRL 160 Query: 191 LKDWITQKKESLVPFVIAGDFNRKIN-------------YLGNNDDFWKTIDPNDSLIRF 237 L + S ++ GD N + + + L Sbjct: 161 LSKRVKALLNSGKHVIVLGDINAAHKPIDHCNPCKYEDFSSFPGRAWLDELLVSLPLPDN 220 Query: 238 PKEKDSRCNA-----------------NKNLR---------NKIPIDYFVMDQNAYKFLI 271 + +C + N IDY ++D + Sbjct: 221 SCDSSWKCVSGLLIDSFRYFHPLQREAYTNWSTSTGARQTNYGTRIDYILVDPPLLQQ-- 278 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D + SDHCP+ Sbjct: 279 --------EFVDCVIRPEVEGSDHCPVVCTL 301 >gi|39972661|ref|XP_367721.1| hypothetical protein MGG_07632 [Magnaporthe oryzae 70-15] gi|145016845|gb|EDK01275.1| hypothetical protein MGG_07632 [Magnaporthe oryzae 70-15] Length = 309 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 41/299 (13%), Positives = 79/299 (26%), Gaps = 22/299 (7%) Query: 14 VPCTASVAQKVRLVSWNINTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI 68 + + +R+ S+NI +E K R + A I Sbjct: 22 LIPRQAKPLALRVTSFNIRFDAEVSRREKQEKAWSDRKPVLVKTMADIAAKPATAGAPAI 81 Query: 69 VFLQEMGSYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 LQE+ S K W S +T K V + Sbjct: 82 FGLQEVLSNQLSDIKKGMGAGWDHIGVAREDGKSKGEFSPIIYNT-----KDLKVVTSAT 136 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 L D S+A + ++ + + L + LD++ + + Sbjct: 137 KWLTETPDKPSKAAGAGSSRIVTLAVFEHVATKKRFLHANTHLDNVSPEARIAG--IKVA 194 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++D + + +P + GDFN + + ++ Sbjct: 195 VTQIQDMLKAQ-GGKLPVSLTGDFNSVAGGDAAKALADMNFVKDVHDVATKAQRSGEELT 253 Query: 248 NKNLRN---KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ID+ + NA ++ Y +SDH + D Sbjct: 254 YTAFEQGAGRGRIDFVWIGPNA-----DAPYTVQKYEVRANFVDNLFMSDHRAVVADIT 307 >gi|148547712|ref|YP_001267814.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida F1] gi|148511770|gb|ABQ78630.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida F1] Length = 257 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 35/286 (12%), Positives = 80/286 (27%), Gaps = 56/286 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----GSYNA 79 + +++ N++ LR+ + AD+VFLQE+ + Sbjct: 21 LNVLTLNVHKGFTFFNRRF----------ILPELREAVRATGADLVFLQEVHGSHQQHAL 70 Query: 80 VAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +P+ F + + + A+ K + + + Sbjct: 71 RHPAWPETPQYEFLADSMWPQFAYGRNAVYPHGDHGNALLSKFPISRFNNLDVSVQGN-- 128 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R + +E+ G V + + + +Q + + D + Sbjct: 129 ---EQRGLLHCQLEVPGHD-EVHAVCVHLGLR-----------EAHRQRQVKLMLDLLAS 173 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 P +IAGDFN W+ + + + + + Sbjct: 174 -LPPNAPVIIAGDFND-----------WRLKADAVLSEHLTEAFGTPARSFPARLPLLRL 221 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + + + + K LSDH P++ + + Sbjct: 222 DRIYLRNA-----VPGAAQVLS------KYPWSHLSDHVPLAAEIN 256 >gi|257066091|ref|YP_003152347.1| exodeoxyribonuclease III Xth [Anaerococcus prevotii DSM 20548] gi|256797971|gb|ACV28626.1| exodeoxyribonuclease III Xth [Anaerococcus prevotii DSM 20548] Length = 274 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 85/304 (27%), Gaps = 56/304 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWNI++L+ + + R + KN + D++ LQE Sbjct: 1 MKFISWNIDSLNAALTSDSKRAVMSRD------VLLTIKNENPDVIALQETKLPANGPSK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F+ + S R + K +++S+P +GA D+ G Sbjct: 55 KHVEKLSEFFPDYDYVWISSRPGARKSYAGTMTLYKKGLDVKESFPEIGAPDTMDLEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + + ++ + L + L + Sbjct: 114 -----ILTLEFEDFYFTQVYTPNAGGELKRLPLREEWDKLYADYLAEL--------DKNK 160 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GDFN + + F + A Sbjct: 161 PVIATGDFNVAHEEIDLAHPENNHMSAGFTDEERRGFTNLLNRGFTDTFRHLNKNLEGAY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF++ + +I + + + DH PI Sbjct: 221 TWWAQRVKTSKINNSGWRIDYFLVSDRLMEDVIDSTIIDSGDRQ-----------DHTPI 269 Query: 299 SIDY 302 ++ Sbjct: 270 MLEI 273 >gi|116628715|ref|YP_813887.1| exonuclease III [Lactobacillus gasseri ATCC 33323] gi|282852356|ref|ZP_06261698.1| exodeoxyribonuclease III [Lactobacillus gasseri 224-1] gi|311111551|ref|ZP_07712948.1| exodeoxyribonuclease III [Lactobacillus gasseri MV-22] gi|116094297|gb|ABJ59449.1| Exonuclease III [Lactobacillus gasseri ATCC 33323] gi|282556098|gb|EFB61718.1| exodeoxyribonuclease III [Lactobacillus gasseri 224-1] gi|311066705|gb|EFQ47045.1| exodeoxyribonuclease III [Lactobacillus gasseri MV-22] Length = 275 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 87/305 (28%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL+SWNI++L+ + + R + K D DI+ +QE + Sbjct: 1 MRLISWNIDSLNAALTSDSARAKLTRG------VLNTIKEKDPDIIAIQETKLRSTGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + S + + KN + + P++GA + G Sbjct: 55 KHQEILAEMFPDYDYVWRSSEEPARKGYAGTMFLYKNTLAPEVTKPVIGAPEPMDHEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V ++ + + ++ Q L Sbjct: 114 -----ILTLEFDNYYVTQVYTPNSGNELKRLDDRQVWDEKYTEYLQKLDQ--------NK 160 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + +GD+N + + + F K + Sbjct: 161 PVIASGDYNVAHTPIDLKHPESNHHNAGFTDEERQDFDKLLKLGFTDTFRKVHGNVEGVY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY+++ + + + + DHCPI Sbjct: 221 SWWAQRVRTSKANNSGWRIDYYIVSNRIADQVTKSEMLDTGERK-----------DHCPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 MLEIN 274 >gi|262283107|ref|ZP_06060874.1| exodeoxyribonuclease III [Streptococcus sp. 2_1_36FAA] gi|262261359|gb|EEY80058.1| exodeoxyribonuclease III [Streptococcus sp. 2_1_36FAA] Length = 275 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 80/305 (26%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q + DADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLS------QAVLQTLQAEDADIIAIQETKLSATGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K ++P +GA S R Sbjct: 55 KHLEILANLFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAP-STMDVEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +V ++ + + + ++ L Sbjct: 114 I-----ITLEFDDFFVTQVYTPNAGDGLKRLDDRQVWDAKYAEYLATLDQ--------QK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F N Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 VMEIE 274 >gi|169620123|ref|XP_001803473.1| hypothetical protein SNOG_13263 [Phaeosphaeria nodorum SN15] gi|160703966|gb|EAT79147.2| hypothetical protein SNOG_13263 [Phaeosphaeria nodorum SN15] Length = 605 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 40/326 (12%), Positives = 87/326 (26%), Gaps = 69/326 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--- 78 + + + ++N+ L+ + Y ++ DI+F+QE+ N Sbjct: 290 EGITIGAYNVENLAANSSH---------HPLLAGHIVDYLRS--PDIIFIQEVQDDNGPT 338 Query: 79 ---------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 A + + F + + +I TA + +R+ Sbjct: 339 NDAVVSANLTLSTLSAAIRAAGGPQY-SFTDVVPVDDQDGGQPGGNIRTAYLYKPSLIRL 397 Query: 124 ------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEI--------NGKKI 157 + P + + +R+ + E+ Sbjct: 398 YKPNPGGSLDANEVLDGPTLKYNPGRIDPANEAWTASRKPLVAQWEVISSKSSNRKEDTF 457 Query: 158 WVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK--KESLVPFVIAGDF 211 + +++H S SL P Q+ +++ K+ + AGDF Sbjct: 458 FTVNVHFGSKGGSSSLHGDARPPVNGGVQDRIDQSVITANFVKNILSKDKNARVITAGDF 517 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N I K + N +D+ + + K + Sbjct: 518 NEFTFVEPLKQYVQ--ISGLRDADAADKIDELERYTYLFDMNAQQLDHMFVSDSVAKKIK 575 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCP 297 E + ++SDH P Sbjct: 576 YEHVHV-----NTWPEFAAQVSDHDP 596 >gi|78046333|ref|YP_362508.1| hypothetical protein XCV0777 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325928431|ref|ZP_08189622.1| metal-dependent hydrolase [Xanthomonas perforans 91-118] gi|78034763|emb|CAJ22408.1| conserved hypothetical protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325541148|gb|EGD12699.1| metal-dependent hydrolase [Xanthomonas perforans 91-118] Length = 255 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 42/295 (14%), Positives = 86/295 (29%), Gaps = 60/295 (20%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVF 70 AS ++ +R+++ NI S S + + + + DIV Sbjct: 3 ASDSRTLRVLTANIQAGSSTRRYSDYVTRSWSHALPLGSKRTSLDSIAKLVGER--DIVG 60 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYP 129 LQE + + + + + +H R +A + K V Q + Sbjct: 61 LQEADPGSLRSGFTNQTHYLAERAGFDYWSHQPNRRMGGVASSANGLLSKLEPVEVQDHA 120 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 L G R G R + + V HL + Q Sbjct: 121 LPG------RIGGRGILLAKFGEGRDGLAVAVAHLSLG-------------ANSRMAQLA 161 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC--NA 247 ++ + ++ + ++ GDFN + L R + + C + Sbjct: 162 FIAELLSDHPNA----MLMGDFNCMADRPEMQS-----------LYRHTRLQPPSCEVHT 206 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + R ID+ ++ + + ++ SDH + +D Sbjct: 207 FPSWRPDRAIDHILVSDSL--------------VIEHTEAIPAAFSDHLAVGMDI 247 >gi|325186273|emb|CCA20779.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 279 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 30/295 (10%), Positives = 85/295 (28%), Gaps = 34/295 (11%) Query: 10 VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 + ++ A + ++S+N+ T + + W + L+ + + + D + Sbjct: 6 LLLILSAPTLTALEFSVISYNVRTSNAPDVSYPWTDRK-------QQLQPFIEAENPDFI 58 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-KKNVRVLQQSY 128 QE + T + + + + + + + S+ Sbjct: 59 GTQEASPEQF------EFFQQALGDTYGITGECAGECYENERPFLMYKKSEWNSLEFGSF 112 Query: 129 PL-LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 L + ++++ R + I + + LE++ Sbjct: 113 ALEIRGSNTWNLEYKRSVSWQRFQHKSNSISICLFNTHFDMTKGHLESS----------- 161 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + + ++ +S F++ GD N + + + + Sbjct: 162 -KLIVQERSKICKSFDFFILTGDLNANLQDDAIHYLKGIPLISTLQQCGYQGGTFIGPGV 220 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + DY + N +I S D + G+ ++DH + + Sbjct: 221 FTGPLSSAVFDYIFIQPNENIRIIGSSII-------DSRRNGQAITDHAIVKTTF 268 >gi|298253361|ref|ZP_06977153.1| exonuclease III [Gardnerella vaginalis 5-1] gi|297532756|gb|EFH71642.1| exonuclease III [Gardnerella vaginalis 5-1] Length = 288 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 35/285 (12%), Positives = 76/285 (26%), Gaps = 45/285 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN--- 108 ++ + ++ D+ +QE+ + + ++E ++N K D+ Sbjct: 15 AERKGMLNWSDAHTPDVWCMQEVRAPQDAIDPIMTKIEMGYRTSENIVNSIKNDNFTYTN 74 Query: 109 -----DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 +A+ V ++ ++D S R + G +I + ++ Sbjct: 75 EVCRVKGRAGVALVTSLPVVEKRYGLPGLSEDVDS---GRWVETDVRTPEGYEITIASVY 131 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------ 217 + + D L L + ++ GDFN Sbjct: 132 VHAGNVDD--PQKMQQKFRFLDTMLIRLGELRNIAASGGNQAILCGDFNIAHTSLDIKNA 189 Query: 218 ----------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPID 258 + I+ + + + +D Sbjct: 190 KANEKSAGFLPEERAYIDRWINEYEFVDVMRMLAGDIQGPYTWWSQRGKAFDNNVGWRLD 249 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 Y + + D +S R SDH P+SI YD Sbjct: 250 YQFATPEIAESARG-------FVIDRAESYDARWSDHAPLSIKYD 287 >gi|148980013|ref|ZP_01815834.1| putative phospholipase C precursor [Vibrionales bacterium SWAT-3] gi|145961456|gb|EDK26760.1| putative phospholipase C precursor [Vibrionales bacterium SWAT-3] Length = 450 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 35/289 (12%), Positives = 81/289 (28%), Gaps = 32/289 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + S+N+ L + S+ + D++ LQE S + + Sbjct: 182 LNVASYNLWLLPSVSSNIAGRASIMNHSL-----------SGFDVLALQEAFSTD--RDI 228 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + R + + D ++ Sbjct: 229 LFNKLADEYPYRTEVVGGKSNALYDGGVVTF-SRHPIIETDSIVFEHCTGTDCYADK--- 284 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + +G+ + + HL SF + + + +T+ + Sbjct: 285 GVVYTKINKDGEIYHIFNTHLASFNTPSAKRLRRLQLGLMRTF-------MLTKGIPANE 337 Query: 204 PFVIAGDFNRKINYLG-NNDDFWKTID-PNDSLIRFPKEKDSRC-NANKNLRNK-----I 255 + AGDFN N T+D + + N + Sbjct: 338 AVIYAGDFNIDKNSDFLEYLLMLATLDVDPPEFRGYTRATFDPTINPYAAYKYSGGADVE 397 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +DY + + + + + ++ + LSDH I ++ F Sbjct: 398 YLDYVFVSRVHRRAVNNTNTVKLNQRLNSETWGSWHLSDHFAIDANFVF 446 >gi|322797021|gb|EFZ19335.1| hypothetical protein SINV_07629 [Solenopsis invicta] Length = 388 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 34/285 (11%), Positives = 80/285 (28%), Gaps = 29/285 (10%) Query: 33 TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF 92 L + S R + + + +++ DI+ LQE+ S + + K Sbjct: 1 MLFPFPSRGIPYVSRDRC-ARISAIADKCASMEYDIICLQEVWSVDDFKLIKAK------ 53 Query: 93 YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAKDSFSRAGNRRAVE 147 + ++ +S + + I + + + G + Sbjct: 54 --AQEVLPYSHYFHSGVFGSGICILSRYPIQDVMFHKWPLNGYVHKIHHGDWFGGKGVGL 111 Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207 ++I + V HL + + + QA ++ ++ Sbjct: 112 CKIKILNMNVNVYITHLHA-----EYNHENDEYMAHRVLQAFDTAQFVKMTSGGADAIIL 166 Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI--------PIDY 259 AGD N + L + + + C N +K+ ID+ Sbjct: 167 AGDLNTEPQDLAYKIIQGVSGLVDTCPNSASHIGTNECANNSYTSSKLAQTKPDGKRIDH 226 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + +F + + + SDH + F Sbjct: 227 IMYLGSKTVKVEVTNFQHPWL--NRVPYKNFSYSDHEAVMATLKF 269 >gi|319900799|ref|YP_004160527.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] gi|319415830|gb|ADV42941.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] Length = 366 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 44/334 (13%), Positives = 89/334 (26%), Gaps = 77/334 (23%) Query: 3 RKYVLALVFFLVPCTASVA-------------QKVRLVSWNINTLSEQEGVSLWKNSVKR 49 + +L L+ FL+ + + +L+S+NI Sbjct: 68 KSALLPLIGFLLCYSQIRTYLPINFHTDNLPEESFKLLSYNIMGFDGATKKDGGNP---- 123 Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 + Y K ADI+ LQE + + + K+ + S Sbjct: 124 -------ILTYLKESGADILCLQEYVTIESSRHLSQKDVSHELRDYPYHRINI-VGSGKG 175 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 IA K + + +V V+I + +++ HL+S Sbjct: 176 YTNQIACYSKYPILSARRLNYSS--------EYNGSVIYEVKIGEDTVTLINNHLESNKL 227 Query: 170 LDSL-----------------------ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206 + + + ++ + QA + + I + + Sbjct: 228 TKADKVVYEDMLKSPEKDKVKSGIRLLIRKLAEASAIRAPQADTIANEIA--SSAHPYII 285 Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 + GDFN + F + + + ID + +N Sbjct: 286 VCGDFNDTPISYTHRTIAQNM------DDAFTQSGRGLGISYNQNKFYFRIDNILTSKNL 339 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + R + SDH PI Sbjct: 340 KAY-------------NCTVDRSIKESDHYPIWC 360 >gi|162329921|pdb|2O3C|A Chain A, Crystal Structure Of Zebrafish Ape gi|162329922|pdb|2O3C|B Chain B, Crystal Structure Of Zebrafish Ape gi|162329923|pdb|2O3C|C Chain C, Crystal Structure Of Zebrafish Ape Length = 282 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 77/304 (25%), Gaps = 73/304 (24%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +++ SWN++ L + + + D DI+ LQE Sbjct: 24 AANMKITSWNVDGLRAWVKKNG---------------LDWVRKEDPDILCLQE---TKCA 65 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K P + + E + + + ++ +A+ K + G Sbjct: 66 EKALPADITAM---PEYPHKYWAGSEDKEGYSGVAMLCKTEPLNVT----YGIGKEEHDK 118 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R ++ +++ ++ + + L + Sbjct: 119 EGR-----VITAEFPDFFLVTAYVPNASRGLVRLDYRKTWDVDFRAYLCGL--------D 165 Query: 201 SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + P V+ GD N + + + F + + Sbjct: 166 ARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPEEREGFTQLLEAGFTDSFRELYPDQA 225 Query: 246 NANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 A +DYFV+ L SDHC Sbjct: 226 YAYTFWTYMMNARSKNVGWRLDYFVLSSALLPGLCDSKIRNT-----------AMGSDHC 274 Query: 297 PISI 300 PI++ Sbjct: 275 PITL 278 >gi|67459413|ref|YP_247037.1| exodeoxyribonuclease III [Rickettsia felis URRWXCal2] gi|67004946|gb|AAY61872.1| Exodeoxyribonuclease III [Rickettsia felis URRWXCal2] Length = 267 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 77/305 (25%), Gaps = 72/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V+WNIN+L LLR+ A DI+ LQE +++ Sbjct: 1 MKIVTWNINSL----------------RLRIDLLRKLAHEHQPDIILLQETKVDDSL--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + S + +A+ K S L + R Sbjct: 42 ------FPLEVIKNIGYEHVTYSGQKSYNGVAIISKFPLNNVFSLELYNSDK-------R 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ +I +V D + + + + +++W+T + Sbjct: 89 HIAAIVNDIEIHNFYV-------PAGGDIPDIEVNLKFKHKLEYVRLMQEWLTTNRTKND 141 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 +I GD N + + + + Sbjct: 142 KIIIVGDLNIAPLEHDVWSSKQLRNVISHTDIERSLLVELQNSLGFIDSSRHFVPFDEKF 201 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + N L + SDH P Sbjct: 202 YTWWSYRNIDWKKSNRGRRLDHIWVSDNLKDAL-------FSIHLLSEARDWSPPSDHVP 254 Query: 298 ISIDY 302 + Sbjct: 255 YFVTL 259 >gi|183221215|ref|YP_001839211.1| exodeoxyribonuclease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911306|ref|YP_001962861.1| exodeoxyribonuclease III [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775982|gb|ABZ94283.1| Exodeoxyribonuclease III [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779637|gb|ABZ97935.1| Exodeoxyribonuclease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 256 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 34/274 (12%), Positives = 79/274 (28%), Gaps = 63/274 (22%) Query: 57 LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 L + ++ + DI+ QE + F + +++S +S TA+ Sbjct: 19 LLDFIRHENPDILCFQETKAPGKEIDREEFRHLGYEVYFSLAEKPGYSG--------TAV 70 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++K +V +G D R+ R + + ++ +++ S + + Sbjct: 71 LTKQKPKQVT------IGFGDGIFRSEGRSVF-----LEFQDFYLWNLYFPSGTSGEERQ 119 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN--- 231 + Q + + P +I GD N + ++ + Sbjct: 120 -------KVKYQFLDEFTELTKPFLKKKKPLLICGDVNIAHTEMDIHNPKGNQNNSGFLP 172 Query: 232 ------------DSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFL 270 F + + IDYF + ++ L Sbjct: 173 AERKWFTDFLELGFFDCFRTIHPDVLDEYSWWTYRFQARKNNKGWRIDYFFVTKSKSVRL 232 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ +SDH P+ ++ F Sbjct: 233 QTAKI-----------AKEPVMSDHAPVVLEIQF 255 >gi|67458642|ref|YP_246266.1| exodeoxyribonuclease III [Rickettsia felis URRWXCal2] gi|67004175|gb|AAY61101.1| Exodeoxyribonuclease III [Rickettsia felis URRWXCal2] Length = 260 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 87/303 (28%), Gaps = 69/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + LLR + + DI+ LQE+ Sbjct: 1 MKIATWNIN----------------SIKTRLNLLRNFLSKENPDILLLQEIKCETE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ + +A+ K + +++ R Sbjct: 41 ------KFPFDELSDLPYNFYVHGQKSYNGVAIISKFP----ADEIIKDFPNNYCSDQAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E+ + + ++ ++ + F+ S + + ++++ KK Sbjct: 91 F-LEIKLSLPIGFCNIISLYAPNGSFVGSDKFVAKLAF------YDNFINYLSTKKSFDE 143 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 +I GDFN + +TI + + S+ Sbjct: 144 KTIIGGDFNIAPFDIDVYSPKALAETTCFTEIEQKKLRTILNSGFEDLYRLRHPSKQE-F 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID + N +L D ++ SDH P+ Sbjct: 203 SWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYM-------DYNLRTQEKPSDHIPVI 255 Query: 300 IDY 302 + Sbjct: 256 ASF 258 >gi|321260765|ref|XP_003195102.1| component of the CCR4-NOT transcriptional complex; Ccr4p [Cryptococcus gattii WM276] gi|317461575|gb|ADV23315.1| Component of the CCR4-NOT transcriptional complex, putative; Ccr4p [Cryptococcus gattii WM276] Length = 745 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 37/351 (10%), Positives = 92/351 (26%), Gaps = 66/351 (18%) Query: 15 PCTASVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 T+ + ++++NI + S + LL + AD+V LQ Sbjct: 381 TPTSGKQESFSVLTYNILCASFAPATTYSYTPSWALDWDYRKRLLLEEIVTASADVVCLQ 440 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH----TAIAVRKKNVRVLQQSY 128 E+ +P + + +K S ++ A +++ R+++ Sbjct: 441 EIDCKQYADYFYPMLKKEGYEGQHYPRSRAKTMSADEQKLVDGCATFWKEEKFRLVETQV 500 Query: 129 PLLG----------AKDSFSRAGNRRAVELL----VEINGKKIWVLDIHLKSFCFLDSLE 174 +D F+R +R + ++ +G ++ V + + Sbjct: 501 IEFNQLALQKTDMRTEDMFNRVMSRDNIAVVAALEFRTSGGRLLVANS---HIYWDHRYR 557 Query: 175 NTYSPSCSLLSQQAQWLKD----------------------WITQKKESLVPFVIAGDFN 212 + +L ++ + + + + +K +P ++ D N Sbjct: 558 DVKLVQIGMLMEELEKIVEQFSKYPVKLDTDPEYNNGKPPKYERSEKGRDIPLIMCVDLN 617 Query: 213 RKINYLGNN--------------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + + + L N Sbjct: 618 SFSGSAVYDYLSSGSIPGDHEDFMSHLYGRYTASGLKHHLGLRSACAGIGEMKMTNFTPT 677 Query: 253 NKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IDY + + ++ SDH P+ + Sbjct: 678 FAAAIDYVFYTPRTMKVTSVLGDVDKAYLDKTVGFPNAHFPSDHIPVFTQF 728 >gi|169837263|ref|ZP_02870451.1| exonuclease III [candidate division TM7 single-cell isolate TM7a] Length = 267 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 71/305 (23%), Gaps = 64/305 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +RL SWN+N + + + DI+ LQE + + Sbjct: 2 DMRLYSWNVNGIRAVIKKGTFLP--------------FISEYQPDILCLQETKAKKNQVE 47 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + +++ +S + + + Y L Sbjct: 48 I-DLPDYFEIWNSAERAGYSGTAIFSKAKPLNTWL-DFPEDIVKKYNLDQDDYGNPNNEG 105 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSL-ENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + V ++ + S + + + + L+ Sbjct: 106 R-IIAAEFDN----FIVATVYTPNSKGDLSRLQLRHQKWDKAWLEYMKKLESI------- 153 Query: 202 LVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P + GD N + + F Sbjct: 154 -KPVLFCGDLNVAHTEDDLANPKPNIGKHGFTNEERAGFDAFIQSGFKDTFRIFTKGNGY 212 Query: 247 ANKNLRN--------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + SDHCP+ Sbjct: 213 YSWWTHWANARARNIGWRIDYWLASEKLANKITEAQIH-----------PDIMGSDHCPV 261 Query: 299 SIDYD 303 S+ D Sbjct: 262 SVTID 266 >gi|167034651|ref|YP_001669882.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida GB-1] gi|166861139|gb|ABY99546.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida GB-1] Length = 264 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 39/297 (13%), Positives = 89/297 (29%), Gaps = 52/297 (17%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 F A +++R+++ N + LR+ ++ ADIVFL Sbjct: 10 FASINQAPAVKRLRVLTVNTHKGFTAFNRRF----------ILPELREAVRSTQADIVFL 59 Query: 72 QEM----GSYNAVAKVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQ 125 QE+ + A +P+ + F + + + + D H A+ K + Sbjct: 60 QEVLGSHDRHAARYPGWPQTSQYEFLADSMWSDFAYGRNAVYPDGHHGNALLSKYPIIEH 119 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 ++ + R + ++++ G+ ++ + +HL + Sbjct: 120 RNLDVSITG-----PERRGLLHCVLDVPGQGQVHAICVHLSLLESHRQKQLQLLRKLL-- 172 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + P +IAGDFN + + + F + Sbjct: 173 ------------DALPADAPVIIAGDFNDWKTHGNRTLGLQRDLHE-----AFERHHGHL 215 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + +D + + + LSDH P++++ Sbjct: 216 ARTYPARLPLLRLDRIYLRNA-----ESHGPRILGHK------PWSHLSDHLPLAVE 261 >gi|330808554|ref|YP_004353016.1| exodeoxyribonuclease III [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376662|gb|AEA68012.1| Putative exodeoxyribonuclease III [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 264 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 91/305 (29%), Gaps = 72/305 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + +R+ ++NIN + L ++ + DI LQE+ AV Sbjct: 2 KNLRIATFNING----------------IRARLPNLLEWLEREKPDIACLQEL---KAVD 42 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K FP + + + +A+ ++ + L+ L G D Sbjct: 43 KDFPA-------AELESVGYGAIWHGQASWNGVAILARDAQPLESRRGLPGGDDDNHSRY 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 AV ++ V ++L + + Y + + L D+ + S Sbjct: 96 LEAAVHGVL--------VGCLYLPNGNPQPGPKFDYKLA------WFERLIDYAQGLQAS 141 Query: 202 LVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRC 245 P V+AGD+N + + + + +D + D R Sbjct: 142 DHPVVLAGDYNVVPTDMDIYNPRSWLKDALLQPESRACYLRLLDQGWTDSLRHLYPDERI 201 Query: 246 NANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ +++ A +L + D SDH P Sbjct: 202 YTF-WDYFRQHWQKNSGLRIDHLLLNPAASAYLSEAGV-------DAWVRNQPHPSDHAP 253 Query: 298 ISIDY 302 I Sbjct: 254 TWIRL 258 >gi|322699478|gb|EFY91239.1| endonuclease/exonuclease/phosphatase family protein [Metarhizium acridum CQMa 102] Length = 605 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 37/334 (11%), Positives = 86/334 (25%), Gaps = 64/334 (19%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIVFLQEM 74 +++ + + +N L+ +T +++ Q L D++FLQE+ Sbjct: 289 TSSAHCSGLTVADYNAENLAPN------------STHLPSVVSQIVTKLRTPDLIFLQEV 336 Query: 75 GSYNA-VAKVFPKNT----------------WCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + V F + +I A R Sbjct: 337 QDNSGPVDDGVTSANLTLSTLTQGIEKTSGVRYDFVEVAPVDGQDGGQPGGNIRCAYLYR 396 Query: 118 KKNVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEI---NGKK 156 V + + P + + R+ + + + K Sbjct: 397 PDTVELYKPNPGGSNDENAVVDGPSIKYNPGRIGQSDANFEATRKPLVAMWKPVKRPDKV 456 Query: 157 IWVLDIHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGD 210 + +++H S L + Q + ++I Q + + AGD Sbjct: 457 FFTINVHFSSKGGSTGLHGDPRPPVNKGVEKRTGQMELTANFIAQILARDPKARIITAGD 516 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + + + +N +D+ + + Sbjct: 517 FNEFTQVQPV--ATFASKSGLLDADEAAGLAEVERYTYLFDQNSEALDHMYISKGL---- 570 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + ++ + SDH P +F Sbjct: 571 -ARHAQVEHLHLNTWQNYDGQTSDHDPSVAKLNF 603 >gi|284030306|ref|YP_003380237.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283809599|gb|ADB31438.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 329 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 83/294 (28%), Gaps = 71/294 (24%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 L+P +R++S N++ + D Q DAD++ L Sbjct: 104 LLIPGKGGGPYDLRVLSHNVDAANP----------------DPARTAQQLLAADADVMAL 147 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 +E+ S + ++ + +A+ K S + Sbjct: 148 EEITS-------ADLKVYKKQFAAT--------YPHVVTRGTVALWSKFPVEESASVDV- 191 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 A R A+ V K+ HL S S + + + + L Sbjct: 192 ------GFAWTR-ALRAEVSTPEGKVAFYVAHLASVRIGTSGFTSNQRNET-----IKQL 239 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 I +K + V+ GDFN N +++ P + +R + + Sbjct: 240 GQQIAGEKLAG--VVVMGDFNGTAND--------RSLAPVTAGLRSAQGAAGQGFGFTWP 289 Query: 252 R--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID+ ++ + + SDH P+ + Sbjct: 290 AKFPMARIDHIMVRG-----VTPTKAWVM----------DPTGSDHRPVVAELT 328 >gi|227506363|ref|ZP_03936412.1| endonuclease/exonuclease/phosphatase [Corynebacterium striatum ATCC 6940] gi|227197014|gb|EEI77062.1| endonuclease/exonuclease/phosphatase [Corynebacterium striatum ATCC 6940] Length = 940 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 33/336 (9%), Positives = 99/336 (29%), Gaps = 61/336 (18%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNS---------------------VKRTTSDYTLLRQY 60 + + ++N+ G +S + + + Sbjct: 530 GEYTIGAFNVLNYFTSLGEEYGGSSYDDMDGNPVTVKRGTTRGAYTAEAFENQQRKIVAA 589 Query: 61 AKNLDADIVFLQEMGS-----------YNAVAKVFPKNTWCIFYSTERLINHSKRDSN-- 107 LDAD++ L E+ A+A + + + ++ + Sbjct: 590 VNGLDADVIALSEIEDGYGVTGDKSKRDQALAHLTDELNAAAGSEKWAYVASPEKLPDTV 649 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKS 166 + I TA +++ V+ + +S + + + + V+ + + + H KS Sbjct: 650 DVIRTAFIYKRERVKPVGESRIFVDDRFTGTAREPLAQEFAPVDAADDETFVAVANHFKS 709 Query: 167 FC----FLDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLGNN 221 + + ++ QA+ + + + ++ + + GD N + + Sbjct: 710 KGSVVKGDADTGDGQGNNPNVRKAQAEAVLEHLAKQPDWQDKATFVMGDLNTYTHGDAID 769 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + + ++ + + + +D+ + ++ + I + Sbjct: 770 ------VFRDSGYTVPAEDYHADA-SYQFSGLLGSLDHVLANEVVSGKVTDAQVWNINAD 822 Query: 282 EDDIKSRGKR--------------LSDHCPISIDYD 303 E +R SDH P+ + + Sbjct: 823 EPVAFEYSRRNYNIVDFYDDSPFRASDHDPVKVGFS 858 >gi|326927917|ref|XP_003210134.1| PREDICTED: 2',5'-phosphodiesterase 12-like, partial [Meleagris gallopavo] Length = 321 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 37/318 (11%), Positives = 75/318 (23%), Gaps = 35/318 (11%) Query: 22 QKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 VR VS+NI S LL++ +AD+V LQE+ Sbjct: 3 GSVRAVSYNILADAYAQTEFSRTVLYPYCAPYALEVDYRQNLLKKELAGYNADLVCLQEV 62 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKKNVRVLQQSYPLLGA 133 + P ++ ++ ++ ++ Sbjct: 63 DKSVFADSLAPALDAFGLEGLFKIKEKQHEGLATFYRRDKFSLLSQHDITFSEALLSEPP 122 Query: 134 KDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSF-----CFLDSLENTYSPSCSLLSQQ 187 R V V + V + ++ C ++ + ++ Q Sbjct: 123 HAELRDKLGRYPVVRDKVLQRSSVLQVSVLQSETDPSRKLCVANTHLYWHPKGGNIRLIQ 182 Query: 188 AQW---LKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPND 232 ++ +P + GDFN + + D + Sbjct: 183 IAVALSHIKYVACDLYPNIPVIFCGDFNSTPSSGTYGFINTGGIAEDHEDWASNGEEERC 242 Query: 233 SLIRFPKEK-----DSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIK 286 ++ K N +DY + + S Sbjct: 243 NMPLSHPFKLQSACGEPAYTNYVGGFYGCLDYIFIDRNALEVEQVIPLPSHEEVTTHQAL 302 Query: 287 SRGKRLSDHCPISIDYDF 304 SDH + D + Sbjct: 303 PSVSHPSDHIALVCDLKW 320 >gi|228989540|ref|ZP_04149525.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM 12442] gi|229003360|ref|ZP_04161190.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4] gi|228757978|gb|EEM07193.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4] gi|228770265|gb|EEM18844.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM 12442] Length = 263 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 76/269 (28%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF-----------YSTERLIN 100 L + + D++ LQE+ V F S I Sbjct: 18 EKIRHLAKTIQEEGYDVIALQEVSQSIKAQNVCGNKKKDNFGLVLLAELEKLGSGNYNIV 77 Query: 101 HSKRDSNNDIH-TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 DI+ A+ K+ V Q S+ + +KD+ R+ V V GK + Sbjct: 78 WDYSHIGYDIYEEGSAIITKHPIVKQDSFFVSESKDTSYWKA-RKIVSATVSYKGKNMTF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + ++ GDFN G Sbjct: 137 YSCHLGW----------WNDEEETFQGQVDCLTQHVN----ENELSILMGDFNNNARLQG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 D+ D+ K+ + K ID + ++ + Sbjct: 183 EGYDYLMQKGLYDTYELAFKKDEGTTVQGKIAGWDENKQNLRIDLILSNKPKTVISSKVI 242 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ I N +SDH + + D Sbjct: 243 FNGINRNI---------ISDHFGVEVQLD 262 >gi|114800092|ref|YP_762220.1| putative exodeoxyribonuclease III [Hyphomonas neptunium ATCC 15444] gi|114740266|gb|ABI78391.1| putative exodeoxyribonuclease III [Hyphomonas neptunium ATCC 15444] Length = 269 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 79/306 (25%), Gaps = 68/306 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++ +WNIN + + D+V LQE +A Sbjct: 4 PIKITTWNIN----------------SVRLRAPNVEAFVAAEKPDVVCLQETKCQDA--- 44 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + + + H +A+ + + Q P L ++ Sbjct: 45 -----EFPLKAFKDMGLPYLVIRGQRGGHAGVAIASRLP-LEQVDVPDLCRENHARVIAA 98 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + V +I+L + D+ + + + L + + Sbjct: 99 RLP---------SGLEVHNIYLPAG--GDTPDPDANDKFAHKLDFLDRLGPGYKK-LKKG 146 Query: 203 VPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246 V V+ GD N + + + Sbjct: 147 VKRVLVGDLNVAPHENDVWSHKQLLGIVSHTPQETERLEDSRKSAGFEDIARLAVPEEQK 206 Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ ++ A + + S+ G + SDH Sbjct: 207 LYTWWSYRAADWAASNRGRRLDHIWANKAAMEDVKVSSYRIHPA-----WRSGWKPSDHA 261 Query: 297 PISIDY 302 P+S+ Sbjct: 262 PVSLTL 267 >gi|31209449|ref|XP_313691.1| AGAP004405-PA [Anopheles gambiae str. PEST] gi|30176802|gb|EAA44583.1| AGAP004405-PA [Anopheles gambiae str. PEST] Length = 387 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 41/345 (11%), Positives = 91/345 (26%), Gaps = 65/345 (18%) Query: 24 VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++ +N+ + + ++ + + ++ ADI+ LQE+ + Sbjct: 25 FTVMCYNVLCDKYATRQMYGYCPSWALSWEYRKKAILDEIRHYAADIISLQEVETDQFFN 84 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLL------ 131 P+ + + +K S D AI R ++++ Sbjct: 85 FFKPELKNDGYEGIFSPKSRAKTMSEADRKYVDGCAIFFRSAKFTLIKEHLVEFNQLAMA 144 Query: 132 ---GAKDSFSRAGNR--RAVELLVEINGKKIWVLDIHL----KSFCFLDSLENTYSPSCS 182 G+ + +R + + L+++ + + + + C Sbjct: 145 NAEGSDNMLNRVMPKDNIGLAALLKVKEGAWESVSSEAAQISQPILVCTAHIHWDPEFCD 204 Query: 183 LLSQQAQWLKDWITQKKES--------------LVPFVIAGDFNRKINYLGN-------- 220 + Q L + + + V V+ GDFN + Sbjct: 205 VKLIQTMMLSNELKTILDEAGLSFRPGHKFDVNNVQLVLCGDFNSLPDSGVIEFLSAGRV 264 Query: 221 -----------NDDFWKTIDPNDSLIRFPKEKDSRC--------NANKNLRNKIPIDYFV 261 + I D+ F N K IDY Sbjct: 265 SMDHQDFKELGYKSCLQRISNCDTPNEFTHSFKLASAYSEDIMPYTNYTFEFKGIIDYIF 324 Query: 262 MDQNAYK---FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + L S + N+ SDH P+ ++ + Sbjct: 325 YSKQGMVPLGLLGPISPEWLRDNKVVGCPHPHIPSDHFPLLVELE 369 >gi|329114100|ref|ZP_08242864.1| Exodeoxyribonuclease III [Acetobacter pomorum DM001] gi|326696639|gb|EGE48316.1| Exodeoxyribonuclease III [Acetobacter pomorum DM001] Length = 261 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 75/303 (24%), Gaps = 74/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N L+ + K D++ +QE+ + Sbjct: 1 MKLATWNVN----------------SVRQRMDLVLDWLKREQPDVLMMQEIKCETDL--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + ++ + + + L G D +R Sbjct: 42 -------FPKAAFEDAGYGCAVIGQKSYNGVSTLVRGDFSITTDH-LPGFSDPAARY--- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 VE+ + I + +++L + + L Sbjct: 91 ------VEVRTQHIVLGNLYLPNGNSGGEQGYA------TKLEFLNALTARARLLLAEET 138 Query: 204 PFVIAGDFNRKI--------------------NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 FV+AGD+N + W + + Sbjct: 139 DFVLAGDYNICPAPIDCAPGALGPEDALVRPQSRAAYRRLLWLGLTDALRAVHPT-GAAY 197 Query: 244 RCNANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID+ ++ + L D + R SDH P Sbjct: 198 TFWDYQARAWERDCGLRIDHMLLSPRLAERLQ-------TAEPDKNERAMPRPSDHVPFI 250 Query: 300 IDY 302 + Sbjct: 251 VTL 253 >gi|282899308|ref|ZP_06307277.1| hypothetical protein CRC_00757 [Cylindrospermopsis raciborskii CS-505] gi|281195765|gb|EFA70693.1| hypothetical protein CRC_00757 [Cylindrospermopsis raciborskii CS-505] Length = 256 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 28/283 (9%), Positives = 64/283 (22%), Gaps = 36/283 (12%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ ++++N+ G W + ++ ++ QE + Sbjct: 2 QITVMTFNLRCDKPDPGERCW-------QKRVGAIACMIQHYQPELWGTQEGQPHQLRDL 54 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + +R ++ P + ++ Sbjct: 55 QVLLPDYEFV-GGDRTGTGKGEHCAIFYKRGKLQLRETQDFYLSDTPEIPGSITWGTRLP 113 Query: 143 RRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R G + +++ HL S L++ Sbjct: 114 RMVTWANFIAEDLGFSLTIMNTHLDHEVSRARELGAGLVSLRLMNF-------------P 160 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKT-IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 ++ GDFN L I + +K + + I Sbjct: 161 REDYLLLTGDFNAGPRSLERIILADNYRIKDALGNLPVESQKTFHDFTGQAWDPRDTI-- 218 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + DD + G SDH P+ + Sbjct: 219 ----------YCDRRWQINQVIIDDQQWEGIWPSDHFPVIVKL 251 >gi|262405346|ref|ZP_06081896.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 2_1_22] gi|262356221|gb|EEZ05311.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 2_1_22] Length = 341 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 38/343 (11%), Positives = 88/343 (25%), Gaps = 59/343 (17%) Query: 2 IRKYVLALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKN----------- 45 ++K ++ L + + Q+ + +N+ L + + Sbjct: 1 MKKSLMTLGVLALFVLMAYGQEKKFALYSVAFYNMENLFDTIHDEGKNDYEYLPNGTNQW 60 Query: 46 SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + + + + + L D I+ + E+ +Y + + + Sbjct: 61 NTMKYKAKLKNMSEILSMLSTDKLPMGPAIIGVSEIENYRVLEDILKQP---ALADRGYQ 117 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 H + + A K + + + + R + I G+K+ Sbjct: 118 YVHYEGADQRGVDCAFFYNPKLFELTNSKL-VPYVYINDTVHKTRGFLIASGNIAGEKMH 176 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 + H S + Q + +KD + +++S VI GD N Sbjct: 177 FIVNHWPSRAAASPVRERAGE-------QVRAIKDSL-LREDSAAKIVIMGDMNDDPMDK 228 Query: 219 GNNDDFWKT-----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLI 271 + P D + D V N Sbjct: 229 SMAVALGAKRKPADVGPTDLYNPWWDTLKKGYGTLMYKGKWNLFDQIVFTGNLLGTDRST 288 Query: 272 QESFSEILYNEDDIKSRGKR-----------------LSDHCP 297 + + ++ D + + + SDH P Sbjct: 289 LKFYKHEIFRRDFMFQKEGKYKGYPKRTQAGGVWLNGYSDHLP 331 >gi|241954618|ref|XP_002420030.1| endonuclease/exonuclease/phosphatase family protein, putative [Candida dubliniensis CD36] gi|223643371|emb|CAX42248.1| endonuclease/exonuclease/phosphatase family protein, putative [Candida dubliniensis CD36] Length = 362 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 39/298 (13%), Positives = 76/298 (25%), Gaps = 31/298 (10%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL + NI ++ + R ++ + +I+ LQE+ + + Sbjct: 73 LRLYTNNIRFDNKNYPDKYEQPWEIRKIQSINSMKFNTFQGNGNIICLQEVLHNQLLDIL 132 Query: 84 FPKN---TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 N W + S + +N P + +K + A Sbjct: 133 EGLNEIEEWNYYGVGRTDGKTSGEYAPIFYKDKDFKIIENSTFWLSPTPNIPSK-GWDAA 191 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + E +I + S L+ + + Sbjct: 192 LERIVTMVTFESRLNPQIKFNIFNTHY--DHRGIIARRKSSQLIVDKMK---------NY 240 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR--FPKEKDSRCNANKNLRNK-IPI 257 + P + GDFN + N + LI ++ I Sbjct: 241 NDYPSFLCGDFNTEPNDEPYHILTTAGFKDGKILIDKNSAYGFETTFTGFDINNEPISRI 300 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKS------------RGKRLSDHCPISIDYD 303 DY + ++D + G SDH P+ Y+ Sbjct: 301 DYIW-SPAFTHTSLSSENETGNDSDDTYEVTLKQFGILSNWFNGHHFSDHRPVVSTYE 357 >gi|241166987|ref|XP_002409964.1| conserved hypothetical protein [Ixodes scapularis] gi|215494698|gb|EEC04339.1| conserved hypothetical protein [Ixodes scapularis] Length = 437 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 75/265 (28%), Gaps = 23/265 (8%) Query: 45 NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104 K T + Y + D D VFLQE+ S ++ K T + H+ Sbjct: 16 GISKHREERMTAIANYLSSSDLDFVFLQEIWSQRDYKRIRSK--------TRNNLPHAHY 67 Query: 105 DSNNDIHTAIAVRKKNVRVLQQ--SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 + + + + + K+ Y L G F + + + ++++ Sbjct: 68 FHSGVLGSGVCILSKSPIADTGMLKYNLNGYAHKFYHGDWFGGKVVGLCKVNHRGLLINL 127 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 ++ S QA + ++ E+ ++AGDFN + N Sbjct: 128 YVTHLHA--EYNRQRDIYLSHRICQAFEMSQYVKLTSETCDLAIVAGDFNTEPLDPPYNI 185 Query: 223 DFWKTIDPNDSLIR---FPKEKDSRCNANKNLRNKI----PIDYFVMDQNAYKFLIQESF 275 T + + ++ IDY + + Sbjct: 186 ILHNTCLEDAFDSLCVGATCGHPDNHYTSAYDKHTCPTGKRIDYVMFKVGRGVVANCKVC 245 Query: 276 SEILYNEDDIKSRGKRLSDHCPISI 300 LSDH P+ + Sbjct: 246 KNPRLKTTSGLP----LSDHEPVEV 266 >gi|294339964|emb|CAZ88327.1| putative Nuclease [Thiomonas sp. 3As] Length = 267 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 83/305 (27%), Gaps = 68/305 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+ + N+N + + + D++ +QE+ K Sbjct: 5 PLRVTTLNLNGVRSAANKGVDDWLRSQAR--------------PDVLCVQEL-------K 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + L + + + ++ + + K+ + +G + A Sbjct: 44 ALEADMTPSLRTLGGLPGAAFQHAEKPGYSGVGLYWKHEPDEVR----IGFGHAEFDAEG 99 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + G ++ ++ + S + + + + L ++ Sbjct: 100 RYVEAIYKRSGGGRLSIVSAYFPSGSSSEERQQAKFRFLADFHEHLLAL--------KAA 151 Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD N + ID + F + + N Sbjct: 152 GEVLLCGDVNIAHKEIDLKNWKGNLKNSGFLPEERAWMTRLIDEAGYVDVFRQLDPAP-N 210 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + +S +R SDH P Sbjct: 211 RYTWWSNRGQARAKNVGWRIDYHLATPGIAAQAKSDSAWIYT---------EQRFSDHAP 261 Query: 298 ISIDY 302 ++IDY Sbjct: 262 LTIDY 266 >gi|15222370|ref|NP_174438.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] gi|12597850|gb|AAG60160.1|AC074360_25 hypothetical protein [Arabidopsis thaliana] gi|332193247|gb|AEE31368.1| DNAse I-like protein [Arabidopsis thaliana] Length = 283 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 78/269 (28%), Gaps = 22/269 (8%) Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 + KN +AD + LQE+ Y++ F +N YS + N + Sbjct: 17 WEKRSKAILDNIKNFEADFICLQEVDEYHSF---FDRNMEAQGYSGIPIENKEGYECAIF 73 Query: 110 IHTAIA-------------VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NG 154 A + +N+ V S + A V + +I Sbjct: 74 FKPKFAEFITYQTTRIQGYTKYENLCVAPSSSTVSSESSDVVNAEELSVVMVAFKILKPF 133 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 + ++ D ++ L + K+ I+ ++AGDFN K Sbjct: 134 NHVVIIASSHLKSGKPDRWDDLKLAQVKTLMTELASFKEIISALTNCSPSVILAGDFNSK 193 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 + D + K N +DY + +I Sbjct: 194 PYVHKYINS-DNIPSDIDLRSVYEFTKGEPRFTNNVPGFAETLDYMFYTHS---EIISPV 249 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +E D SDH PI ++++ Sbjct: 250 KLLDSPDEVDFLPNEIHPSDHLPIGVEFE 278 >gi|325286008|ref|YP_004261798.1| exodeoxyribonuclease III Xth [Cellulophaga lytica DSM 7489] gi|324321462|gb|ADY28927.1| exodeoxyribonuclease III Xth [Cellulophaga lytica DSM 7489] Length = 254 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 34/302 (11%), Positives = 82/302 (27%), Gaps = 73/302 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+N+N + + D D++ LQE+ K Sbjct: 1 MKIVSYNVNGIRAAINKGF---------------IDWLTATDPDVICLQEI-------KA 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + ++ +A+ K G + R Sbjct: 39 LKEQLDLSLFEEAGYSYNYWYSAQKKGYSGVAILSKTEP----DNVTYGTGIDYMDFEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + I ++ ++L S + + +I + K+ Sbjct: 95 N-----IRADFGDISIMSMYLPSGT--------NLARLDFKLKYMDDFQKYINELKKDKP 141 Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GD+N + +D W I + + + Sbjct: 142 NIIVVGDYNICHEAIDIHDPVRNKNVSGFLPVEREWIGNFMESGFIDSFRHFNKEPHNYS 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +DY ++ + L + + + SDHCPI + Sbjct: 202 WWSYRANARNNNKGWRLDYGMVSKTLENRLKRAVIL-----------KEAKHSDHCPILV 250 Query: 301 DY 302 + Sbjct: 251 EL 252 >gi|313157364|gb|EFR56787.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 383 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 36/287 (12%), Positives = 81/287 (28%), Gaps = 42/287 (14%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK- 82 +++++N+ + G+S + + Q + + DI+ LQE + A Sbjct: 124 FKVMTYNVRGFYGENGLSSVGD-----------VLQLIGDHNPDIICLQEFNARLAGQSD 172 Query: 83 --VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ--QSYPLLGAKDSFS 138 + S + I + + + V + + L D Sbjct: 173 EFALLDEKYESAVFGRTQAPDSLYGAPLVILSKYRILRSGVVLTPGTSVWADLLIGDDTI 232 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD---SLENTYSPSCSLLSQQAQWLKDWI 195 R N ++ L D S+ + + L + Q + + Sbjct: 233 RVFNNHLRSTAIKAADNDYLTSRGFLSDTAREDKLRSMAGRFRENSVLRAAQVDSIAVVV 292 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + ++ GDFN K ++ F + + + N + Sbjct: 293 EAWRSR---CIVCGDFNDTP-MSYVYRTMAKGLND-----AFSQCGSGYSHTFRGFFNTL 343 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IDY + + ++ + SDH P+ + Sbjct: 344 RIDYVLSSEG--------------FDALSYEVPTVDYSDHHPVVVRL 376 >gi|300113645|ref|YP_003760220.1| endonuclease/exonuclease/phosphatase [Nitrosococcus watsonii C-113] gi|299539582|gb|ADJ27899.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus watsonii C-113] Length = 226 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 41/283 (14%), Positives = 84/283 (29%), Gaps = 59/283 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV-AK 82 +R ++NI++ + D ++L AD++ LQE+ + Sbjct: 1 MRFATYNISSCIGTDRRF-----------DPARTASVIRSLKADVLALQEVEHRSIKGQD 49 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + A+ R + ++V + + R Sbjct: 50 LLDYLAHQTGL--RAIPGPIFLRRSLRYGNALLTRTEWLKVQRHELSVP-------RREP 100 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R A+++ ++ G+KI V+ HL S S Q Q L + Sbjct: 101 RGAIDVNLKWQGQKIRVVATHLGL-------------SARERSFQVQQLLNL--GLTPDG 145 Query: 203 VPFVIAGDFNR-KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 V+ GDFN + + S + + +D Sbjct: 146 ERTVLMGDFNEWWPWSRSLHRLRGEF------------GCFSNLPSFPGCYPILALDRIW 193 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + +L E + S + SDH P+ ++ Sbjct: 194 L----------HGYQRLLALEVETSSLARVASDHLPLKAVVEW 226 >gi|260550183|ref|ZP_05824396.1| catabolite repression control protein [Acinetobacter sp. RUH2624] gi|260406711|gb|EEX00191.1| catabolite repression control protein [Acinetobacter sp. RUH2624] Length = 280 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 82/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +R+VS N+N L L ++ + DAD+V +QE ++ + Sbjct: 20 LRVVSINVNGLRSSVTKG---------------LLEWLEQSDADVVCMQESRITHEQWTE 64 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 F W ++ A+ + V + DS R Sbjct: 65 KFRPEGWHTHLFPAERAGYA----------GTAIYSRLPFVSIKDGLGFELADSQGRF-- 112 Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++ + + ++L S + + + + Q ++ Sbjct: 113 ---ISAEFDLGLSHPVHIASLYLPSGSSGE-------EAQARKDLFLGEYAKILKQWRDE 162 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 +I GD+N + + + I + + + Sbjct: 163 NKSIIICGDYNIVHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDELGYVDTFRVVRTEAE 222 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + + + + SDH P Sbjct: 223 LYSWWSNRGQARAKNVGWRIDYQACSPDWKARTVNAWV-----------YKDQWFSDHAP 271 Query: 298 ISIDY 302 + IDY Sbjct: 272 VIIDY 276 >gi|223039251|ref|ZP_03609541.1| exodeoxyribonuclease III [Campylobacter rectus RM3267] gi|222879612|gb|EEF14703.1| exodeoxyribonuclease III [Campylobacter rectus RM3267] Length = 256 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 84/304 (27%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + + D + LQE+ Sbjct: 1 MKLISWNVNGLRAVAAKDGF---------------AWLEEQKPDFLGLQEI---KVRESD 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P + + ++ + + ++ ++ + K V Q++ + Sbjct: 43 VPSEIYKLGFNEISVNSATRA-----GYSGVMSLAKFASVTQKAAFFDDDEGR------- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++E + + +I+ + ++ + AQ L + Sbjct: 91 -----VLEHRFGNVALFNIYFPNGQKDEARLAYKMDFYAKFLAYAQEL-------VKQGK 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + GD N L + + + + F + +A Sbjct: 139 DVIFCGDVNTAHREIDLKNPKANAKTSGFLPIERAWLDEVVSHGFIDTFRHVRGDAVDAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + L D SDHCP+ Sbjct: 199 SWWSYRFNARAKNVGWRIDYFFISASLKDRLK-----------DAFILSDITGSDHCPVG 247 Query: 300 IDYD 303 I+ D Sbjct: 248 IEID 251 >gi|86149633|ref|ZP_01067863.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597280|ref|ZP_01100515.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 84-25] gi|218561918|ref|YP_002343697.1| exodeoxyribonuclease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85839901|gb|EAQ57160.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190341|gb|EAQ94315.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 84-25] gi|112359624|emb|CAL34409.1| exodeoxyribonuclease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925531|gb|ADC27883.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni IA3902] gi|315927175|gb|EFV06525.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315928582|gb|EFV07877.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 305] Length = 252 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 78/304 (25%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + D + QE+ A Sbjct: 1 MKLLSWNVNGLRAICDKNA---------------LDWIAQEQIDFIGFQEI---KAHEDK 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FPK + + + + ++ + +++ + F R Sbjct: 43 FPKKIYEYPFKHMYFNSAKRA-----GYSGVMSLCNFNSEVKK-------CEFFDDEEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++E K I + +I+ + + N + L Sbjct: 91 -----VLEHRFKNIALFNIYFPNGQKDEERLNFKMQFYADFLVYLDKLLK-------DGF 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GD N L + + + F + Sbjct: 139 EIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + L + ++ SDH P+ Sbjct: 199 SWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFIRDDIF-----------GSDHAPVG 247 Query: 300 IDYD 303 I+ D Sbjct: 248 IEID 251 >gi|294627673|ref|ZP_06706255.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294667101|ref|ZP_06732326.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292598025|gb|EFF42180.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603111|gb|EFF46537.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 255 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 42/295 (14%), Positives = 86/295 (29%), Gaps = 60/295 (20%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVF 70 AS ++ +R+++ NI S S + + + + DIV Sbjct: 3 ASDSRTLRVLTANIQAGSSTRRYSDYVTRSWSHALPLGSKRTSLDSIAKLVGER--DIVG 60 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYP 129 LQE + + + + + +H R +A + K V Q + Sbjct: 61 LQEADPGSLRSGFTNQTHYLAERAGFDYWSHQPNRRMGGVASSANGLLSKLEPVEVQDHA 120 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 L G R G R + + V HL + Q Sbjct: 121 LPG------RIGGRGILLAKFGEGRDGLAVAVAHLSLG-------------ANSRMAQLA 161 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC--NA 247 ++ + ++ + ++ GDFN + L R + + C + Sbjct: 162 FIAELLSDHPNA----MLMGDFNCMADRPEMQS-----------LYRHTRLQPPSCDVHT 206 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + R ID+ ++ + + ++ SDH + +D Sbjct: 207 FPSWRPDRAIDHILVSDSL--------------VIEHTEAIPAAFSDHLAVGMDI 247 >gi|53803236|ref|YP_115006.1| endonuclease/exonuclease/phosphatase family protein [Methylococcus capsulatus str. Bath] gi|53756997|gb|AAU91288.1| endonuclease/exonuclease/phosphatase family protein [Methylococcus capsulatus str. Bath] Length = 282 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 85/285 (29%), Gaps = 54/285 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKR----TTSDYTLLRQYAKNLDA-DIVFLQEMGSYN 78 +RL S+NI T + R +T L + A+ L+ DI LQE+ Sbjct: 28 LRLASFNIQTGISTSSYRDYITGGWRHVWPSTKRLPNLNRIAQLLEPFDIAGLQEVDGGG 87 Query: 79 AVAKVFPKNTWCIFYSTE-RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + + ++ N R + + + YPL G Sbjct: 88 MRSHNIVQTQYLAEHAGFAYWHNQVNRRIGRLALHSNGLLSRIRPDFVHDYPLPGMPG-- 145 Query: 138 SRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A+ ++V HL S +Q +++ D I Sbjct: 146 -----RGALLARFGRDPRNALYVCVAHLAL-------------SRRARLKQLRFISDLIG 187 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 V+ GD N + N D ND + R + R Sbjct: 188 HLP----YVVMMGDLNCEPNTPEL-DLLLDATHLNDPVCRL--------KTFPSWRPHKM 234 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 +D+ ++ + + ++ SDH P+S++ Sbjct: 235 LDHILVTPSLR--------------VNRLEVIDFACSDHLPVSME 265 >gi|297160831|gb|ADI10543.1| hypothetical protein SBI_07423 [Streptomyces bingchenggensis BCW-1] Length = 455 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 36/300 (12%), Positives = 83/300 (27%), Gaps = 40/300 (13%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 VP A + ++S+N+ L E S + + + D+V +QE Sbjct: 40 VPTAAPDSGSFNVLSYNVAGLPEGLSSSHPEKNTPLISPRLGA---------YDLVNVQE 90 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 +Y+A + + S + + Sbjct: 91 DFNYHAALYAGDDHPYRTPTSG-----------GVPFGDGLNTLSDLPYDDFERVKWARC 139 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + ++ G + + ++H + L + L D Sbjct: 140 NGTDCLTPKGFSLARARLAEGVYVDLYNVHTNAGTTAADLTARRAN--------ITQLSD 191 Query: 194 WITQKKESLVPFVIAGDFNRKINYLG--NNDDFWKTIDPNDSLIRFPKEKDSR------- 244 +I + ++ GD N + D + + + Sbjct: 192 FIAAN-SAGNAVIVMGDTNTRYTRAEDNIRDLTGRNGLTDAWVQLIRGGSAPPAGSDALV 250 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 C+ + +D + + L + + D + + G+ LSDH P ++D+ + Sbjct: 251 CDPDHVTNTCEVVDKILYRSS--PLLTLTATRYNNEHPDFLDAAGEPLSDHYPHTVDFSW 308 >gi|269119015|ref|YP_003307192.1| exodeoxyribonuclease III Xth [Sebaldella termitidis ATCC 33386] gi|268612893|gb|ACZ07261.1| exodeoxyribonuclease III Xth [Sebaldella termitidis ATCC 33386] Length = 255 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 93/307 (30%), Gaps = 82/307 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ SWN+N + + + +IV +QE + Sbjct: 1 MRIYSWNVNGIRALYNKGEFFK---------------LFEEEPEIVCIQETKAQAEQLSE 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ N + F+ ++ ++ +AV K ++ + + + + Sbjct: 46 ELLNINGYSSFF----------ESADKKGYSGVAVYSKKKPLMVKKFDI-----ERFDSE 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R +E+ + +++ + + + C + +++ ++K+S Sbjct: 91 GRY-----IELEYEDFILINCYFPNSQEKGKRLDYKIDFC-------DEILNYLEERKKS 138 Query: 202 LVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 +I GD+N + K I+ + ++ Sbjct: 139 GKAVIITGDYNIAHKPIDLARPKDNEENPGYLPEEREWMTKFIEAG--YVDSFRKFYPEE 196 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + IDYF +++ + LI ++ SDHC Sbjct: 197 VKYTWWSYRTRAREKNIGWRIDYFCINKESEGILIDSGIRNDVF-----------GSDHC 245 Query: 297 PISIDYD 303 PI ID Sbjct: 246 PIYIDIS 252 >gi|262199576|ref|YP_003270785.1| exodeoxyribonuclease III Xth [Haliangium ochraceum DSM 14365] gi|262082923|gb|ACY18892.1| exodeoxyribonuclease III Xth [Haliangium ochraceum DSM 14365] Length = 301 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 39/319 (12%), Positives = 80/319 (25%), Gaps = 73/319 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWK--------------NSVKRTTSDYTLLRQYAKNLDADIV 69 VR+VSWN+N L + + + ++ R R++ + +DA IV Sbjct: 5 VRVVSWNVNGLRAVDRTTPRRASAAASPSPGQVRASTGARAQRGGGRFRRWIERVDATIV 64 Query: 70 FLQEMGSYNAV--AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 +QE+ + ++ W +S L Sbjct: 65 GVQEVRARRDALPRRLLQPRGWHAHLVEAERAGYSGVGLYAK--------------LAPD 110 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 R + + ++ V +++ + + N + Sbjct: 111 GADTALAGGDFDREGRLQIA-----HFGRLSVANVYFPNG----NGSNRDNSRVPFKLDF 161 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DS 233 + L D + +++ ++ GDFN + Sbjct: 162 YRALFDALGALRDAGQRVLVMGDFNTAHRDIDLARPKQNRKTSGFLPEERAELDRWVAAG 221 Query: 234 LIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + + + + IDY A F+ Sbjct: 222 WVDTFRHFEPGPGHYTWWSQRAGVRARNIGWRIDYVFACPEAMPFVRSA----------- 270 Query: 285 IKSRGKRLSDHCPISIDYD 303 SDHCP + D Sbjct: 271 FLMPQVGGSDHCPHGVVLD 289 >gi|157964825|ref|YP_001499649.1| exodeoxyribonuclease III [Rickettsia massiliae MTU5] gi|157844601|gb|ABV85102.1| Exodeoxyribonuclease III [Rickettsia massiliae MTU5] Length = 268 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 86/303 (28%), Gaps = 69/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + LLR + DI+ LQE+ A Sbjct: 9 MKIATWNIN----------------SIKTRLNLLRNFLSKETPDILLLQEIKCETA---- 48 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ + +A+ K + +++ R Sbjct: 49 ------KFPFDALSDLPYNSYVHGQKSYNGVAIISKFP----ADEIIKDFPNNYCSDQAR 98 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E+ + + ++ ++ + F+ S + + ++++ KK Sbjct: 99 F-LEIKLSLPIGFCNIISLYAPNGSFVGSDKFVAKLAF------YDNFINYLSTKKSFDE 151 Query: 204 PFVIAGDFNRKINYLGNNDDFW---------------KTIDPNDSLIRFPKEKDSRCNAN 248 +I GDFN + +TI + + + Sbjct: 152 KTIIGGDFNIAPFDIDVYSPKLLAETTCFTEVEQKKLRTILNSGFEDLY-RLMHPNKQEF 210 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID + N +L D ++ SDH P+ Sbjct: 211 SWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYM-------DYNLRTQEKPSDHIPVI 263 Query: 300 IDY 302 + Sbjct: 264 ASF 266 >gi|146284370|ref|YP_001174523.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas stutzeri A1501] gi|145572575|gb|ABP81681.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas stutzeri A1501] gi|327482753|gb|AEA86063.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas stutzeri DSM 4166] Length = 289 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 40/298 (13%), Positives = 82/298 (27%), Gaps = 58/298 (19%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLD 65 L ++RL+S+NI E + + + + + N Sbjct: 23 LASTGLPADGRLRLLSFNIQVGISTERYHHYLTRSWQHLLPHPGRAGNLQRIGEVLGNY- 81 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVL 124 D+V LQE + + + R+ + V + Sbjct: 82 -DLVALQEADGGSLRSGYVNQVEHLAHLGAFPYWYQQLNRNLGRFAQHSNGVLSRLEPQG 140 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + +PL G R A+ L + V+ +HL Sbjct: 141 LEDHPLPGPSG-------RGAILLRFGEGADALVVVMMHLALGGG-------------AR 180 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 ++Q +++D I V+ GD N N + N L Sbjct: 181 ARQLAYIRDLIGDY----RHQVLMGDMNTHAND----------LLENSPLRDLGLLAPQV 226 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + R + +D+ ++ + + +SDH P++++ Sbjct: 227 EATFPSWRPQRCLDHILLSPSLTLERVDV--------------LALPISDHLPVAVEI 270 >gi|332187721|ref|ZP_08389456.1| exodeoxyribonuclease III family protein [Sphingomonas sp. S17] gi|332012287|gb|EGI54357.1| exodeoxyribonuclease III family protein [Sphingomonas sp. S17] Length = 260 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 82/309 (26%), Gaps = 77/309 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ SWNIN ++ Q+ DI+ LQE + + Sbjct: 1 MKIASWNIN----------------SVRFRAAIVEQFLTEAAPDILCLQETKVVDDDFPF 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +F + +H +A+ + V D Sbjct: 45 DLFRAAGYEHII-----------IHGQRMHHGVAIASRVPIVED---------DRLDWQA 84 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 N A + V + + + ++++ + + Q+ +L I + Sbjct: 85 NAEARHVGVRLPNG-VRLENVYIPAGGDVPD-----REVNPKFGQKLDFLGRMIEWSGKL 138 Query: 202 LVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 P ++ GDFN + + ND + + Sbjct: 139 DCPTILTGDFNIAPLESDVWSHKQLLDVVSHTPIEVETLASLQASNDWVDLGRHFIPAPQ 198 Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ ++ + I + + SDH Sbjct: 199 RLYTWWSYRAKDWAASDRGRRLDHMWATRDVAEKAIGH-------RVFEGCRSWLKPSDH 251 Query: 296 CPISIDYDF 304 PI ++DF Sbjct: 252 IPIMTEFDF 260 >gi|315057682|gb|ADT72011.1| Exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni S3] Length = 252 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 78/304 (25%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + D + QE+ A Sbjct: 1 MKLLSWNVNGLRAICDKNA---------------LDWIAQEQIDFIGFQEI---KAHEDK 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FPK + + + + ++ + +++ + F R Sbjct: 43 FPKKIYEYPFKHMYFNSAKRA-----GYSGVMSLCNFNSEVKK-------CEFFDDEEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++E K I + +I+ + + N + L Sbjct: 91 -----VLEHRFKNIALFNIYFPNGQKDEERLNFKMKFYADFLVYLDKLLK-------DGF 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GD N L + + + F + Sbjct: 139 EIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + L + ++ SDH P+ Sbjct: 199 SWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFIRDDIF-----------GSDHAPVG 247 Query: 300 IDYD 303 I+ D Sbjct: 248 IEID 251 >gi|89052912|ref|YP_508363.1| exodeoxyribonuclease III [Jannaschia sp. CCS1] gi|88862461|gb|ABD53338.1| exodeoxyribonuclease III [Jannaschia sp. CCS1] Length = 262 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 32/308 (10%), Positives = 73/308 (23%), Gaps = 75/308 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAV 80 L +WNIN ++ Q DI+ LQE S Sbjct: 2 PFTLATWNIN----------------SVRLRQPIVSQLMTEEAPDILCLQECKSPVDKMP 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + VF + + +A+ K S+ G + Sbjct: 46 SDVFAALGYTHV-----------VARGQKGYNGVAIYSKLPMEEAGSHEFAGLDHARH-- 92 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + +E + + + ++ + D + + ++DW Sbjct: 93 -----IAGRLENG---VTIHNFYVPAG--GDVPDRDVNIKFGQKLDYLTDMRDWAKTDTP 142 Query: 201 SLVPFVIAGDFNRKINYLG--NNDDFWKTID-------------PNDSLIRFPKEKDSRC 245 ++ GD N ++ K + + ++ Sbjct: 143 QKS--ILLGDLNIAPREDDVWSHKQLLKVVSHTPIEVEHLAEAQDAGGWVDVTRKDIPDG 200 Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ + + + ++ SDH Sbjct: 201 PLFSWWSYRSPDWDNADKGRRLDHVWATPDISNAAHSSRIARHV-------RGWEKPSDH 253 Query: 296 CPISIDYD 303 P+ +D Sbjct: 254 APVFATFD 261 >gi|327470504|gb|EGF15960.1| exodeoxyribonuclease [Streptococcus sanguinis SK330] Length = 275 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 84/305 (27%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q + DADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLS------QAVLQTLQAEDADIIAIQETKLSATGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K ++P +GA + G Sbjct: 55 KHLEILTNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E +G +V ++ + + + ++ L + Sbjct: 114 ---IITLEFDG--FFVTQVYTPNAGDGLKRLDDRQVWDAKYAEYLATL--------DGQK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F N Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 VMEIE 274 >gi|226942361|ref|YP_002797434.1| endonuclease/exonuclease/phosphatase family protein [Azotobacter vinelandii DJ] gi|226717288|gb|ACO76459.1| endonuclease/exonuclease/phosphatase family protein [Azotobacter vinelandii DJ] Length = 286 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 37/292 (12%), Positives = 85/292 (29%), Gaps = 58/292 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 + ++RL+S+NI E + + + + D D+V L Sbjct: 29 TGDGRLRLLSFNIQVGIRTENYRHYLTRSWQHLLPHAGRAVNLQRIGALLA--DFDLVAL 86 Query: 72 QEMGSYNAVAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE+ + + + + R+ + + + + +PL Sbjct: 87 QEVDGGSLRSDYVNQVEHLAQLGNFPYWYQQLNRNLGPLAQHSNGLLSRLRPSGLEDHPL 146 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G R A+ L + + V+ +HL ++Q + Sbjct: 147 PGPPG-------RGAILLRLGEGAGSLAVIMMHLALG-------------ARTRTRQLAY 186 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 +++ + V+ GD N + + + L + Sbjct: 187 IRELVGDY----RHLVLMGDMNTH----------ARELLEHSPLRDLGLLAPQIEATFPS 232 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + ID+ ++ + +Q I SDH P++++ Sbjct: 233 WRPQRCIDHILLSPSLTLERVQVLPQPI--------------SDHLPVAVEI 270 >gi|325000932|ref|ZP_08122044.1| exodeoxyribonuclease III [Pseudonocardia sp. P1] Length = 281 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 34/275 (12%), Positives = 67/275 (24%), Gaps = 56/275 (20%) Query: 57 LRQYAKNLDADIVFLQEM-----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 L + DAD V LQE+ A+ W + + Sbjct: 24 LLDWLAVADADAVCLQEVRARPEELPAALTDALAAAGWHLRLAPCETA---------KGR 74 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 +AV ++ + A D R L V++ G + V ++L Sbjct: 75 NGVAVLSRSEPEAVRIGFGDPATDLDGR-------YLEVDLPG-DLTVASLYLPKGVAGT 126 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-------- 223 ++ L+ + + V+AGD+N + Sbjct: 127 DKQDAKDAFLKTFG---DHLRTAFARCAATGREMVVAGDWNIAPTEQDLRNWRNNQRNSG 183 Query: 224 -------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAY 267 ++ + + + ID+ + Sbjct: 184 FLPHEREWFAGLLEHGWTDVVRALHPGTDGPYSWWTYRGRAFDNDVGWRIDHLLTTPGLA 243 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + S R SDH P+ + Sbjct: 244 AAAHEA-------VVERAPSHDTRWSDHAPVVVRL 271 >gi|319935137|ref|ZP_08009577.1| exodeoxyribonuclease III [Coprobacillus sp. 29_1] gi|319809962|gb|EFW06345.1| exodeoxyribonuclease III [Coprobacillus sp. 29_1] Length = 252 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 44/301 (14%), Positives = 84/301 (27%), Gaps = 77/301 (25%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 VSWN+N L + K++DADI +QE + + Sbjct: 3 FVSWNVNGLRACLKKGFE---------------DFFKDVDADIFAIQETK----LQRNQI 43 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + S D+ ++ +A+ K + + G R Sbjct: 44 DLEFEGYTSY-------YNDAIKKGYSGVAIYTKKEPMNV----IYGMGIEEHDQEGRL- 91 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + + +K + + ++ + + Q Q L + P Sbjct: 92 ----ITLEFEKFYFVAVYTPNSKRELERLDYRQVWEDAFRQHVQKL--------KESKPV 139 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNANKNL 251 V+ GD N N + +D + N I + K Sbjct: 140 VLCGDLNVAHNEIDLKNDKTNHKNAGFTDQERAKFSELLNSGFIDTFRYKYPETEMYSWW 199 Query: 252 RN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IDYFV+ ++ + + D SDHCP+ ++ Sbjct: 200 SYMFKAREKNAGWRIDYFVVSEDLKENIK-----------DAYIYTEIMGSDHCPVGVEL 248 Query: 303 D 303 + Sbjct: 249 E 249 >gi|167957331|ref|ZP_02544405.1| exonuclease III [candidate division TM7 single-cell isolate TM7c] Length = 265 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 71/304 (23%), Gaps = 64/304 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL SWN+N + + + DI+ LQE + ++ Sbjct: 1 MRLYSWNVNGIRAVIKKGTFLP--------------FISEYQPDILCLQETKAKKNQVEI 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S + + + Y L R Sbjct: 47 -DLPDYFEIWNSAERAGYSGTAIFSKAKPLNTWL-DFPEDIVKKYNLDQDDYGNPNNEGR 104 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSL-ENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + + V ++ + S + + + + L+ Sbjct: 105 -IIAAEFDN----FIVATVYTPNSKGDLSRLQLRHQKWDKAWLEYMKKLESI-------- 151 Query: 203 VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P + GD N + + F Sbjct: 152 KPVLFCGDLNVAHTEDDLANPKPNIGKHGFTNEERAGFDAFIQSGFKDTFRIFTKGNGYY 211 Query: 248 NKNLRN--------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDY++ + + + SDHCP+S Sbjct: 212 SWWTHWANARARNIGWRIDYWLASEKLANKITEAQIH-----------PDIMGSDHCPVS 260 Query: 300 IDYD 303 + D Sbjct: 261 VTID 264 >gi|12322536|gb|AAG51265.1|AC027135_6 hypothetical protein [Arabidopsis thaliana] Length = 274 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 78/269 (28%), Gaps = 22/269 (8%) Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 + KN +AD + LQE+ Y++ F +N YS + N + Sbjct: 8 WEKRSKAILDNIKNFEADFICLQEVDEYHSF---FDRNMEAQGYSGIPIENKEGYECAIF 64 Query: 110 IHTAIA-------------VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NG 154 A + +N+ V S + A V + +I Sbjct: 65 FKPKFAEFITYQTTRIQGYTKYENLCVAPSSSTVSSESSDVVNAEELSVVMVAFKILKPF 124 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 + ++ D ++ L + K+ I+ ++AGDFN K Sbjct: 125 NHVVIIASSHLKSGKPDRWDDLKLAQVKTLMTELASFKEIISALTNCSPSVILAGDFNSK 184 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 + D + K N +DY + +I Sbjct: 185 PYVHKYINS-DNIPSDIDLRSVYEFTKGEPRFTNNVPGFAETLDYMFYTHS---EIISPV 240 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +E D SDH PI ++++ Sbjct: 241 KLLDSPDEVDFLPNEIHPSDHLPIGVEFE 269 >gi|271498824|ref|YP_003331849.1| endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech586] gi|270342379|gb|ACZ75144.1| Endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech586] Length = 380 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 38/263 (14%), Positives = 80/263 (30%), Gaps = 28/263 (10%) Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 L ADI+ E+ + + + ++ +I+ I A R + Sbjct: 121 VINALKADILCAAEVENMAVLHDFNQQILADQAFAQYVMIDSPN--DPRGIDVACLTRHR 178 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYS 178 ++ + SFS +R +E+ ++I + + VL H KS + E S Sbjct: 179 ITQL---RTHIFDTSASFSPLFSRDCLEVTIDIGLTQPVHVLCNHFKSQNGRNDEERERS 235 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-DDFWKTIDPNDSLIRF 237 QA+ + D + V+ GD N ++ + D + + Sbjct: 236 ARRRH--AQAERVADIVRGYNLQQEYVVVMGDLNEDSANPWHSLAPLFSVADLHPVVDPA 293 Query: 238 PKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFS----------------EI 278 E ++ +DY + ++ + + Sbjct: 294 LPETARYTYYFSGGKSGERLNQLDYIFISTPLHQAKVDWGIERRGIYNIDKIAAKEGADP 353 Query: 279 LYNEDDIKSRGKRLSDHCPISID 301 + + S SDH I ++ Sbjct: 354 VTPFPTVTSWDTAASDHAAIWVE 376 >gi|239814966|ref|YP_002943876.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110] gi|239801543|gb|ACS18610.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110] Length = 260 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 84/303 (27%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N ++ L+ + D+ LQE+ S + Sbjct: 1 MKIATFNVNGINS----------------RLALVLSWLAEARPDVACLQELKSPDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + R + +A+ + P+ + + + Sbjct: 41 ------NFPAAAIREAGYGVLFHGQRAWNGVAILAR------GREPIETGRGLDGNSEDS 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ L +NG + V ++L + + Y + + L + Sbjct: 89 QSRYLEAVVNG--VIVGCLYLPNGNPQPGPKFDYK------LEWFERLNAHARLLYGCGM 140 Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247 P V+AGDFN + F + + + + Sbjct: 141 PAVLAGDFNVVPTDADIYNPASWQDDALLQPESRAAFARLLKQGWTDAIRTRHPREAIYT 200 Query: 248 NK-NLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 RN+ ID+ ++++ FL + D SDH P Sbjct: 201 YWDYWRNRWPRNAGLRIDHLLLNRELAPFLADANV-------DREVRGRPGASDHAPAWA 253 Query: 301 DYD 303 D Sbjct: 254 LLD 256 >gi|58269854|ref|XP_572083.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|74684000|sp|Q5KDJ2|CCR4_CRYNE RecName: Full=Glucose-repressible alcohol dehydrogenase transcriptional effector; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase gi|57228319|gb|AAW44776.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 744 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 37/351 (10%), Positives = 92/351 (26%), Gaps = 66/351 (18%) Query: 15 PCTASVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 T+ + ++++NI + S + LL + AD+V LQ Sbjct: 380 TPTSGKQESFSVLTYNILCASFAPATTYSYTPSWALDWDYRKRLLLEEIVTASADVVCLQ 439 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH----TAIAVRKKNVRVLQQSY 128 E+ +P + + +K S ++ A +++ R+++ Sbjct: 440 EIDCKQYADYFYPMLKKEGYEGQHYPRSRAKTMSVDEQKLVDGCATFWKEEKFRLVETQV 499 Query: 129 PLLG----------AKDSFSRAGNRRAVELL----VEINGKKIWVLDIHLKSFCFLDSLE 174 +D F+R +R + ++ +G ++ V + + Sbjct: 500 IEFNQLALQKTDMRTEDMFNRVMSRDNIAVVAALEFRASGGRLLVANS---HIYWDHRYR 556 Query: 175 NTYSPSCSLLSQQAQWLKD----------------------WITQKKESLVPFVIAGDFN 212 + +L ++ + + + + +K +P ++ D N Sbjct: 557 DVKLVQIGMLMEELEKIVEQFSRYPVKLDTDPEYNNGKPPKYERSEKGRDIPLIMCVDLN 616 Query: 213 RKINYLGNN--------------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + + + L N Sbjct: 617 SFSGSAVYDYLSSGSIPGDHEDFMSHLYGRYTASGLKHHLGLRSACAGIGEMRMTNFTPT 676 Query: 253 NKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IDY + + ++ SDH P+ + Sbjct: 677 FAAAIDYVFYTPRTMKVTSVLGDVDKAYLDKTVGFPNAHFPSDHIPVFTQF 727 >gi|77165597|ref|YP_344122.1| endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC 19707] gi|254433781|ref|ZP_05047289.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani AFC27] gi|76883911|gb|ABA58592.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC 19707] gi|207090114|gb|EDZ67385.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani AFC27] Length = 226 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 43/282 (15%), Positives = 85/282 (30%), Gaps = 57/282 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R V++NI++ + D ++L AD++ LQE+ + + Sbjct: 1 MRFVTYNISSCIGTDRRF-----------DPARTASVIRSLKADVLALQEVEHRSVKGQD 49 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + T + + A+ + Q + L R R Sbjct: 50 LLD---YLAHQTGLMAIPGPIFLRRSLRYGNALLTHAELLKIQRHELSIP-----RREPR 101 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A+++ ++ G+KI V+ HL S S Q Q L Sbjct: 102 GAIDVDLKWQGQKIRVVATHLGL-------------SARERSFQVQQLLGL--GLTPDGE 146 Query: 204 PFVIAGDFNR-KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 V+ GDFN + + + S + + +D + Sbjct: 147 RTVLMGDFNEWWPWSRSLHRLRGEF------------GRFSNLPSFPAYYPILTLDRIWL 194 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +L E + S + SDH P+ ++ Sbjct: 195 ----------HGYQRLLAMEVETSSLARVASDHLPLKAVVEW 226 >gi|134113731|ref|XP_774450.1| hypothetical protein CNBG0960 [Cryptococcus neoformans var. neoformans B-3501A] gi|50257088|gb|EAL19803.1| hypothetical protein CNBG0960 [Cryptococcus neoformans var. neoformans B-3501A] Length = 744 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 37/351 (10%), Positives = 92/351 (26%), Gaps = 66/351 (18%) Query: 15 PCTASVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 T+ + ++++NI + S + LL + AD+V LQ Sbjct: 380 TPTSGKQESFSVLTYNILCASFAPATTYSYTPSWALDWDYRKRLLLEEIVTASADVVCLQ 439 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH----TAIAVRKKNVRVLQQSY 128 E+ +P + + +K S ++ A +++ R+++ Sbjct: 440 EIDCKQYADYFYPMLKKEGYEGQHYPRSRAKTMSVDEQKLVDGCATFWKEEKFRLVETQV 499 Query: 129 PLLG----------AKDSFSRAGNRRAVELL----VEINGKKIWVLDIHLKSFCFLDSLE 174 +D F+R +R + ++ +G ++ V + + Sbjct: 500 IEFNQLALQKTDMRTEDMFNRVMSRDNIAVVAALEFRASGGRLLVANS---HIYWDHRYR 556 Query: 175 NTYSPSCSLLSQQAQWLKD----------------------WITQKKESLVPFVIAGDFN 212 + +L ++ + + + + +K +P ++ D N Sbjct: 557 DVKLVQIGMLMEELEKIVEQFSRYPVKLDTDPEYNNGKPPKYERSEKGRDIPLIMCVDLN 616 Query: 213 RKINYLGNN--------------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + + + L N Sbjct: 617 SFSGSAVYDYLSSGSIPGDHEDFMSHLYGRYTASGLKHHLGLRSACAGIGEMRMTNFTPT 676 Query: 253 NKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IDY + + ++ SDH P+ + Sbjct: 677 FAAAIDYVFYTPRTMKVTSVLGDVDKAYLDKTVGFPNAHFPSDHIPVFTQF 727 >gi|258543182|ref|YP_003188615.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01] gi|256634260|dbj|BAI00236.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01] gi|256637320|dbj|BAI03289.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-03] gi|256640372|dbj|BAI06334.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-07] gi|256643429|dbj|BAI09384.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-22] gi|256646484|dbj|BAI12432.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-26] gi|256649537|dbj|BAI15478.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-32] gi|256652523|dbj|BAI18457.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655581|dbj|BAI21508.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-12] Length = 261 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 73/303 (24%), Gaps = 74/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N L+ + K D++ +QE+ Sbjct: 1 MKLSTWNVN----------------SVRQRLDLVLDWLKREQPDVLMMQEIKCETD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A + + L G D +R Sbjct: 41 ------QFPKAAFEDAGYGCAGVGQKSYNGVATLVR-GDFSVTTDRLPGFSDPAARY--- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 VE+N + + + +++L + + L Sbjct: 91 ------VEVNTQGVVLGNLYLPNGNSGGEQGYA------TKLEFLSALTGRARLLLAEET 138 Query: 204 PFVIAGDFNRKI--------------------NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 F +AGD+N + W + + Sbjct: 139 DFALAGDYNICPAPIDCAPGALGPEDALVRPQSRAAYRRLLWLGLTDALRALHPT-GAAY 197 Query: 244 RCNANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID+ ++ + L D + R SDH P Sbjct: 198 TFWDYQARAWERDCGLRIDHMLLSPRLAERLQ-------TAEPDRNERAMPRPSDHVPFI 250 Query: 300 IDY 302 + Sbjct: 251 VTL 253 >gi|254881208|ref|ZP_05253918.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|254834001|gb|EET14310.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] Length = 359 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 41/336 (12%), Positives = 88/336 (26%), Gaps = 85/336 (25%) Query: 3 RKYVLALVFFLVPCTASV---------------AQKVRLVSWNINTLSEQEGVSLWKNSV 47 RKY L L F + C+ ++ +S+N + + + Sbjct: 66 RKYAL-LSFLGLVCSIGAIRTYFPVNVFVSDVPEGAIKFLSYNTMAFEKNRANTKDNPNP 124 Query: 48 KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107 + +Y +N +ADI+ LQE + K Sbjct: 125 ---------VLEYLRNSNADIICLQE--------YIVGGRLTKKEVDYALRDYPYKNYHK 167 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 + + + + ++ +++NG + V++ HL+S Sbjct: 168 ISGANGLGCYSRFPILSAHPVKYASLNN--------GSIAYKIKVNGDTLLVVNNHLESN 219 Query: 168 CFLDSLENTYS-----------------------PSCSLLSQQAQWLKDWITQKKESLVP 204 + + Y + ++ + QA + + K Sbjct: 220 KLTEKDKEVYREMMKDPDKQKVSQGSRLLIGKLAEASAIRAVQADSIARLVAGYKGGG-- 277 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 ++ GDFN + + ++ N ID ++ + Sbjct: 278 IIVCGDFNDSPISYT-HRVVGEGLNDAFVESGNGFGISYNQNHFYF-----RIDNILLSK 331 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 N + + SDH PI Sbjct: 332 NLKSYRCTV-------------DNTIKSSDHYPIWC 354 >gi|297200306|ref|ZP_06917703.1| exodeoxyribonuclease III [Streptomyces sviceus ATCC 29083] gi|197709420|gb|EDY53454.1| exodeoxyribonuclease III [Streptomyces sviceus ATCC 29083] Length = 274 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 36/312 (11%), Positives = 77/312 (24%), Gaps = 73/312 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYN 78 A + + S N+N L ++ AD++ LQE+ Sbjct: 6 AGVLTVTSANVNGLRAAAKKGF---------------VEWLAETSADVLCLQEVRAEPQQ 50 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 V W + ++ + V + + P S Sbjct: 51 LPESVRAPEGWHVVHAPAAAKGRAG-----------------VSLYTRREPDRVRIGFGS 93 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + + ++ G + V ++L S ++ + L+ T+ Sbjct: 94 AEFDTSGRYVEADLPG--VTVASLYLPSGEVGTERQDEKVRFMDEFLVHLKDLR---TRA 148 Query: 199 KESLVPFVIAGDFNRKINY----------------LGNNDDFWKTID--PNDSLIRFPKE 240 V+ GD+N + ++ + Sbjct: 149 AADGREVVVCGDWNIAHQQADLKNWRANQKSSGFLPEERAWLSRVLEPTDGGYVDVVRSL 208 Query: 241 KDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + IDY V ++ + + +R Sbjct: 209 HPDVEGPYSWWSYRGRAFDNDSGWRIDYHVSTPGLASKAVKGFV-------ERAATHAER 261 Query: 292 LSDHCPISIDYD 303 SDH P+++ YD Sbjct: 262 WSDHAPVTVVYD 273 >gi|300870922|ref|YP_003785793.1| exodeoxyribonuclease [Brachyspira pilosicoli 95/1000] gi|300688621|gb|ADK31292.1| exodeoxyribonuclease [Brachyspira pilosicoli 95/1000] Length = 261 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 80/302 (26%), Gaps = 70/302 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++SWN+N + L + K DADI+ LQE A + Sbjct: 3 TLKIISWNVNGIRAAYKKG---------------LLDFIKKEDADIICLQE---TKAFEE 44 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 P++ I + ++ +A+ K + F+ Sbjct: 45 QLPEDLRNIEGYQLFINPADPEI--RKGYSGVAIYTKLKPNKEIKNKFGS---KFTDREG 99 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + L + + +++ + + N +++ LKD Sbjct: 100 R-ILALEFD----DFTIFNVYFPNGGKSEEHFNYKLSFYDEMTKHMIKLKD--------K 146 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKT-------IDPNDSLIRFPKEKDSRCN-------AN 248 ++ GD N + I+ Sbjct: 147 TNVILCGDMNIAHEAIDLARPKENEKSIGFLPIERERITKFLNSGFTDTFRMFVKEGGHY 206 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 K IDYF ++ + + + SDHCPI Sbjct: 207 SWWDMKTRSREKNVGWRIDYFFVNNEISNNIKRADILTDVL-----------GSDHCPIL 255 Query: 300 ID 301 I+ Sbjct: 256 IE 257 >gi|297618884|ref|YP_003706989.1| exodeoxyribonuclease III Xth [Methanococcus voltae A3] gi|297377861|gb|ADI36016.1| exodeoxyribonuclease III Xth [Methanococcus voltae A3] Length = 249 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 33/303 (10%), Positives = 83/303 (27%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + + K + DI+ LQE+ + + +++ Sbjct: 1 MKLISWNVNGIKAILQKGF---------------VDFVKQENPDILCLQEIKTNS-PSQI 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++T +S + + D+F R Sbjct: 45 LDLSEYKQYWNTASKKGYSGTAIFTKQ---------------KPKNITYGMDNFPDEEGR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ ++++++ + + + + + L + Sbjct: 90 -----VITAEYDNYYLVNVYTPNSQRGLTRLDYRMKWDTKFLEYLLSLNE--------SK 136 Query: 204 PFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCN-------ANK 249 P + GD N + + + + Sbjct: 137 PLIFCGDLNVAHKEIDLKNPKTNKKHAGFTEEERMGFDKYVENNFVDTFRLFNKESDNYT 196 Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 IDYF + ++ + + +Y SDHCPI + Sbjct: 197 WWSYMHNARAKNIGWRIDYFCTSNSIVNYVKKSVILDKIY-----------GSDHCPIKL 245 Query: 301 DYD 303 + D Sbjct: 246 ELD 248 >gi|282859608|ref|ZP_06268711.1| endonuclease/exonuclease/phosphatase family protein [Prevotella bivia JCVIHMP010] gi|282587611|gb|EFB92813.1| endonuclease/exonuclease/phosphatase family protein [Prevotella bivia JCVIHMP010] Length = 348 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 37/323 (11%), Positives = 79/323 (24%), Gaps = 60/323 (18%) Query: 26 LVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLDADI------ 68 + +N L + + + + T + Q + D+ Sbjct: 29 VGFYNQENLFDYTHDEGKNDYDFTPNGSYHWNEMKYTHKLANMSQVLAEMGTDVLPNVGC 88 Query: 69 --VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 + L E + + V + + H + I A + K V Sbjct: 89 AFIGLAECENEHVVKDLVAQP---ALAQRNYQYVHIEGPDKRGIDCAFIYQPKFFTVRNT 145 Query: 127 S-YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 P + S R + + + + + V+ HL S + Sbjct: 146 KLVPYVYDLPKDSTRATRGFLTVSGTMANEHVTVIVCHLPSRGAGSYYRELGAK------ 199 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID------PNDSLIRFPK 239 Q + LKD + Q ++ + GD N + + + + Sbjct: 200 -QVKVLKDSLLQ-EDPNCKIFVMGDMNDDPMDASMHKSLSAKAEIAEVGPNDMYNPWYNI 257 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK--------- 290 + D ++ N + ++ + Y + I R Sbjct: 258 LAKQGHGTLQYQGKWNLFDQIILSPNLLNKEGTKDYTTLKYWKSQIFRRDYLFQQEGKYK 317 Query: 291 --------------RLSDHCPIS 299 SDH P+ Sbjct: 318 GNTKRTTAGGVWLDGYSDHLPVV 340 >gi|257070188|ref|YP_003156443.1| exodeoxyribonuclease III Xth [Brachybacterium faecium DSM 4810] gi|256561006|gb|ACU86853.1| exodeoxyribonuclease III Xth [Brachybacterium faecium DSM 4810] Length = 308 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 37/328 (11%), Positives = 77/328 (23%), Gaps = 71/328 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ + NIN + + + D++ LQE+ + Sbjct: 2 LRIATANINGIRA---------------AHRRGFGHWLAERGCDVIALQEVRAQAEKIPA 46 Query: 84 FPKNTWCIFYSTERLINHSKRDS-------NNDIHTAIAV----RKKNVRVLQQSYPLLG 132 + T L + + A+ + + Sbjct: 47 DAFGDHHVALDTGTLPGRNGVAVLTREPPAAVRTWSGTALVGGPASGGPALAEVPASDHV 106 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL------------DSLENTYSPS 180 + L V++ + + ++L Y+ Sbjct: 107 PLTRGLGPFVDQGRYLEVDLADAPLTIASLYLPKGGLPAHLQRPERMREAPDGGARYARK 166 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGNNDDF 224 ++ A+ L F++ GD N + Sbjct: 167 MGFMAAFARHLTRTRRAAAAQGRQFLLMGDLNIAHTRQDLAAWRRNQNNDGFLPEEREWL 226 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESF 275 + P + + IDY + + ++ Sbjct: 227 GAQLSPRTLVDVVRRLHPQEDGPYSWWSWLGQSFAKDAGWRIDYHLATPRLARSALRAEV 286 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + RG RLSDH P+ +DYD Sbjct: 287 --------DREVRGVRLSDHAPVVVDYD 306 >gi|296090736|ref|NP_001171688.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Gallus gallus] gi|194722849|dbj|BAG66138.1| APEX nuclease [Gallus gallus] Length = 300 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 77/303 (25%), Gaps = 77/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ SWN++ L Q+ ++ D+V LQE Sbjct: 45 FKVTSWNVDGLRAWVRKGG---------------LQWLQSEAPDVVCLQETKC------- 82 Query: 84 FPKNTWCIFYSTERLINH--SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + S + H ++ + + + + + D+ R Sbjct: 83 -GAESIPSELSQLPHLPHKFWGSAVGRSGYSGVGLLSRTAPIRVTHGIGIEEHDAEGR-- 139 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 ++ ++V+ ++ + + Q L ++ Sbjct: 140 -------VLTAEFPSVYVVSAYVPNSGRGLNRLQYRQRWDGAFKSFLQRL--------DA 184 Query: 202 LVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P V+ GD N R + D + + L F N Sbjct: 185 QKPVVLCGDLNVAHREIDLRNPKSNRRSPGFTQEERDAFGALLDGGFLDSFRLLYPDVPN 244 Query: 247 ANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 A +DYF++ + L SDHCP Sbjct: 245 AYTFWTYMGGARERNVGWRLDYFLLSTRLREALCDSKIR-----------SAAMGSDHCP 293 Query: 298 ISI 300 I++ Sbjct: 294 ITL 296 >gi|227486633|ref|ZP_03916949.1| exodeoxyribonuclease III [Anaerococcus lactolyticus ATCC 51172] gi|227235345|gb|EEI85360.1| exodeoxyribonuclease III [Anaerococcus lactolyticus ATCC 51172] Length = 275 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 83/305 (27%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWNI++L+ + + R L+ +AD++ +QE Sbjct: 1 MKFISWNIDSLNAALTSDSARAIMSR------LVLDTVIKENADVIAIQETKLPYTGLSK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + S D + K ++ +YP +GA + G Sbjct: 55 KHIAKLAEYFPDYDYVYRSSEDPARKSYAGTMTLYKKGLKVEPTYPQIGAPCTMDFEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++ + + L + + L Sbjct: 114 -----IITLEFDNFYFTHVYTPNAGNGLTRLADRQVWDKLYADYLKSLDQ--------NK 160 Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + AGDFN + + + + F Sbjct: 161 PVIAAGDFNVAHEEIDLAHPENNHESPGFTDEEREGFTNLLAKGFTDTFRHIHGRVEGKY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF++ + + + + DH PI Sbjct: 221 TWWAQRVKTSKINNSGWRIDYFLVSERIKDLITNSDMIDSGERQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 VLEIN 274 >gi|196006483|ref|XP_002113108.1| hypothetical protein TRIADDRAFT_37773 [Trichoplax adhaerens] gi|190585149|gb|EDV25218.1| hypothetical protein TRIADDRAFT_37773 [Trichoplax adhaerens] Length = 273 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 83/287 (28%), Gaps = 33/287 (11%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--A 79 KV+L ++NI L + L + + D+ +QE+ + A Sbjct: 12 GKVKLAAFNIQVLGKT---------KMGKPDVVADLVKILRRY--DLTLIQEIRDISGTA 60 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + ++ + S LI+ +++ A R + G++ + Sbjct: 61 IQQLLTEVNKGHSRSYSMLISDRLGRTSSKEQYAFFYRSDLFSPQGNYHYDDGSESAGED 120 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + +I L I + EN L D Sbjct: 121 TFQREPFVVKFKIRATGKQFLLIPCHASPSYAVEEND-------------ALTDVYDDAT 167 Query: 200 ES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 +I GD N +Y+ +++ + + + + Sbjct: 168 SRLGETNAIILGDLNADCSYVTSSEWSYIRLWTQSRFNWIIPNSADTTTKSTHCAYDR-- 225 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK--RLSDHCPISIDY 302 + ++ + + Y+ + S + +SDH PI ++ Sbjct: 226 -FVLVGSRMQSDYVSGTAKVFRYDTEYGLSYSETTAVSDHYPIEMEL 271 >gi|158321340|ref|YP_001513847.1| exodeoxyribonuclease III Xth [Alkaliphilus oremlandii OhILAs] gi|158141539|gb|ABW19851.1| exodeoxyribonuclease III Xth [Alkaliphilus oremlandii OhILAs] Length = 252 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 76/303 (25%), Gaps = 78/303 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +L+SWN+N + Y K +DADI +QE A Sbjct: 3 KLISWNVNGIRACVTKGF---------------LDYFKEVDADIFCIQE-SKLQAGQIDL 46 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + +++ + + A+ K + G R Sbjct: 47 ELEGYHQYWNYAEKKGY----------SGTAIFTKEEPISV----FYGIGIEEHDKEGR- 91 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ + +++ ++ + + + L + P Sbjct: 92 ----VITLEFGDYYMVTVYTPNSQQKLARLDYRMTWEDCFRSYLNNL--------DKQKP 139 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GD N N + N + + R A Sbjct: 140 IIVCGDLNVAHNEIDLKNPKSNRKNAGFSDEERAKFTEFLGNGYIDTYRYFYPDREGAYT 199 Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 IDYF + + L+ + + SDHCP+ + Sbjct: 200 WWSYMFNARANNAGWRIDYFCVSERLQDKLVSADIHDHIL-----------GSDHCPVEL 248 Query: 301 DYD 303 + Sbjct: 249 VIN 251 >gi|313904223|ref|ZP_07837602.1| exodeoxyribonuclease III Xth [Eubacterium cellulosolvens 6] gi|313471025|gb|EFR66348.1| exodeoxyribonuclease III Xth [Eubacterium cellulosolvens 6] Length = 250 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 75/304 (24%), Gaps = 79/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + + LDAD +QE Sbjct: 1 MKFISWNVNGLRACMKKDFD---------------KTFRELDADFFCIQESKLQEG-QIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + W +++ + + A+ K + D R Sbjct: 45 YCPEGWNEYWNYAEKKGY----------SGTAIWAKKPALQVTYGIGEEEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + + ++ + + Sbjct: 91 -----VITLEYDTFFLVTVYTPN-------SQDGLKRLDYRMTWEDSFRAYLGK-LDEKK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + F Sbjct: 138 PVIVCGDLNVAHEEIDLKNPKTNRKNAGFTDEERGKFTELLDAGFTDSFRYLHPEDVE-Y 196 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ + + + Q + ++ SDHCP+ Sbjct: 197 SWWSYRFHAREKNAGWRIDYFLTSERVKEKIEQAVIHQEIF-----------GSDHCPVE 245 Query: 300 IDYD 303 +D Sbjct: 246 LDIS 249 >gi|302497149|ref|XP_003010575.1| hypothetical protein ARB_03276 [Arthroderma benhamiae CBS 112371] gi|291174118|gb|EFE29935.1| hypothetical protein ARB_03276 [Arthroderma benhamiae CBS 112371] Length = 350 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 38/296 (12%), Positives = 72/296 (24%), Gaps = 30/296 (10%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD-IVFLQEMGSYNAVAK 82 R+++ NI + R L Y L+ + V LQE Sbjct: 68 FRILTHNIRYATTSPSAGEQP-WSVRAPHIVNEL-DYHSRLNPESFVCLQEALHNQVTDV 125 Query: 83 VFP--------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + W + + S A+ ++ V P + +K Sbjct: 126 LAGLNSRPHAQADEWAFYGVGRDDGKQAGEYSPIFYRPAVWTLQEKETVWLSETPSVPSK 185 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + A R + VL ++ + A+ + Sbjct: 186 -GWDAASIRIVTIGVFNHRASNTTVLAMNTHL----------DDQGSKSRFESAKLILSL 234 Query: 195 ITQKKESLVPF---VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP----KEKDSRCNA 247 I + +AGDFN + + D+ + P + Sbjct: 235 IQKYLARHPEVKGNFLAGDFNSAESQEAYREFTKPGSSIVDTYKKVPAAQHYGDEITFTG 294 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY ++ + I + SDH + D Sbjct: 295 FDGKTKGSRIDYVMVGPQSSSASIP-FAVNGYAVMPNRFDNRIYNSDHRAVVADVT 349 >gi|229828142|ref|ZP_04454211.1| hypothetical protein GCWU000342_00199 [Shuttleworthia satelles DSM 14600] gi|229792736|gb|EEP28850.1| hypothetical protein GCWU000342_00199 [Shuttleworthia satelles DSM 14600] Length = 277 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 38/307 (12%), Positives = 85/307 (27%), Gaps = 58/307 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R +SWNI++L+ + + + + + + D +QE A Sbjct: 1 MRFISWNIDSLNAALTGTSARAQMS------AAVLEKIAGMRPDYFAIQETKLPEAGPNQ 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAG 141 +S S R + + + R+ VL+ + P +GA D+ G Sbjct: 55 KQMEIIEKLFSDYDCHYISSRPPARKGYAGVMILARRDAGPVLEVTKPSIGAPDTMDVEG 114 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 ++ I + ++ + + + + L ++ Sbjct: 115 R------ILTIETADFFFTTVYTPNAGDGLRRLDDRQQWDARYADYLAGL--------DA 160 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P + GD+N + + + F + Sbjct: 161 RKPVIACGDYNVAHEEIDLKNPDANHMSAGFTDQEREGFTRLLDRGFADSFRCLHRDLAD 220 Query: 247 ANKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 A + IDYF++ + + + DHC Sbjct: 221 AYSWWAQRVKSSKINNSGWRIDYFLVSDRILNRVNSSEMIDSGARQ-----------DHC 269 Query: 297 PISIDYD 303 P+ ++ D Sbjct: 270 PLLLEID 276 >gi|262198476|ref|YP_003269685.1| endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM 14365] gi|262081823|gb|ACY17792.1| Endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM 14365] Length = 244 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 38/283 (13%), Positives = 72/283 (25%), Gaps = 46/283 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV-AK 82 +R++++NI+ +R + D D+ LQE+ + Sbjct: 3 LRVLTYNIHKCIGGVDRRYNP----------ERVRDTIAHYDPDVALLQEVDHLVPRSNR 52 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-GAKDSFSRAG 141 + A+ + ++ L G + S Sbjct: 53 DRQVDVLGDLLGYRHRTYFPNVRVRGGGEYGNAILSRYPLTHTRNIDLTVGLRKRRSVLH 112 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW-LKDWITQKKE 200 R V L + + + V ++HL Q Q L Sbjct: 113 ARYRVRLPRSRSTRTVHVFNMHLGLAGG-------------ERKLQLQRFLDSHPFTGFH 159 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 P ++ GD N W T+ P L + +D Sbjct: 160 QHTPVIVGGDLND----------VWGTLGPKFLLPAGFRRMPKSPRTFPAYAPMRALDGI 209 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +A +Q + + SDH P+ D + Sbjct: 210 YVRGSAEMRKLQRG----------QIAVAREASDHLPLIADIE 242 >gi|289621687|emb|CBI51598.1| unnamed protein product [Sordaria macrospora] Length = 289 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 79/288 (27%), Gaps = 23/288 (7%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-K 82 +R VS+NI + ++ V + R L D+ + LQE+ + + Sbjct: 16 IRFVSFNIRY-ATKDPVPGEQPWTTRRPRLCAQLNFLTSGHDSTFLCLQEVLFLQLMDIQ 74 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 +W + + S + P + Sbjct: 75 DSLGPSWGHIGRGRKDGKLAGEFSPIFFRVDQWDCEDWKTYWLSETPE-KPSFGWDAVLE 133 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R V+ + F + S L+ + +W ++S Sbjct: 134 RIVTVGSFRHKTTGKGVIVMSTH---FDHRGQVAREESSKLI---LKLASEWRQTNRDSD 187 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP------ 256 P V+ GD N L D+ FP E P Sbjct: 188 PPLVLGGDLNSTPTDLAYKTLTSSDSGLQDASAVFPDELKYGNRKITYTSFGEPDEKAKT 247 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPISIDYD 303 ID+ + +F +L+ + G LSDH P+ +D + Sbjct: 248 IDFLFV-------QRPPTFKLMLFGILSNKFDDGVFLSDHRPVFLDVE 288 >gi|300708619|ref|XP_002996485.1| hypothetical protein NCER_100420 [Nosema ceranae BRL01] gi|263405112|sp|C4V7I7|CCR4_NOSCE RecName: Full=Probable glucose-repressible alcohol dehydrogenase transcriptional effector homolog; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase gi|239605791|gb|EEQ82814.1| hypothetical protein NCER_100420 [Nosema ceranae BRL01] Length = 476 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 38/296 (12%), Positives = 78/296 (26%), Gaps = 23/296 (7%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++NI + + V + +++ DI+ LQE+ +YN Sbjct: 170 TFSCGTYNILSNYSAVRLGYPPTWVLNPDYRKENILHNICSINVDILCLQEVETYNYEDF 229 Query: 83 VFPKNTWCIFYSTERLINHSKR---DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + YS+ + DS + A +K ++ + +K Sbjct: 230 YKDQLELRCEYSSVFQPKGRSKNLTDSKSVDGCATFWKKSKFKIKENLVIDFYSKFINDY 289 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKS-----FCFLDSLENTYSPSCSLLSQQAQWLKDW 194 N+ + I ++ I S ++ + QA L + Sbjct: 290 RFNKNINLVSRYGKKDNIALISIFEISQTKQTLIVVNVHLYWDPEYEDIKFVQAIILLEE 349 Query: 195 ITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------- 245 + + + V+ GDFN N + ++ + Sbjct: 350 LEKVSKCYKNPSIVLLGDFNSLQNSSVYSFITQNSVSNTNLCKYNIGFIPGHFLKLSDAY 409 Query: 246 ------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 N K ID+ I + ++ SDH Sbjct: 410 LSEENDFTNFTPTFKGVIDFIFYSDTLELRSILSTIENEYCDQVVGLPNIHFPSDH 465 >gi|298345296|ref|YP_003717983.1| putative exodeoxyribonuclease III [Mobiluncus curtisii ATCC 43063] gi|315655715|ref|ZP_07908613.1| exodeoxyribonuclease III [Mobiluncus curtisii ATCC 51333] gi|298235357|gb|ADI66489.1| possible exodeoxyribonuclease III [Mobiluncus curtisii ATCC 43063] gi|315489779|gb|EFU79406.1| exodeoxyribonuclease III [Mobiluncus curtisii ATCC 51333] Length = 294 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 35/283 (12%), Positives = 72/283 (25%), Gaps = 48/283 (16%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + +N D+D++ LQE+ + + W + + R+ + + Sbjct: 21 DWLENDDSDLLCLQEVRATPQDTQDLFGPAWDVHVWSCRVKGRAGVALGARRDSD----W 76 Query: 119 KNVRVLQQSYPLLGAK--DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + ++ + P L A+ R + G ++ +L S + Sbjct: 77 EIGQLTEGLPPDLYAEVGGEPDVDSGRWLEAAIHGPQGTTFTLVSAYLHSGELRTEKQKQ 136 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWK-------- 226 + ++ Q L S P +I GDFN + Sbjct: 137 KIAYLHRVGERVQQLSARAMAGVGSDTPQEALICGDFNIVRTARDIKNWKSNHNKTSGVM 196 Query: 227 ----TIDPNDSLIRFPKEKDSRC------------NANKNLRNK---------IPIDYFV 261 K C + +DY + Sbjct: 197 DEEIAFLDAWMADTLSGSKGLPCVDVGRALVGDTDGPYTWWSWRGKAYDNNAGWRLDYHM 256 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + R +DH P+++ YDF Sbjct: 257 ATPGLAGQAQSAAV-------YRAPAYDARFTDHAPVTVTYDF 292 >gi|283782977|ref|YP_003373731.1| putative exodeoxyribonuclease III [Gardnerella vaginalis 409-05] gi|283441148|gb|ADB13614.1| putative exodeoxyribonuclease III [Gardnerella vaginalis 409-05] Length = 288 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 35/285 (12%), Positives = 75/285 (26%), Gaps = 45/285 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN--- 108 ++ + ++ D+ +QE+ + + ++E ++N K D+ Sbjct: 15 AERKGMLNWSDAHTPDVWCMQEVRAPQDAIDPIMTKIEMGYRTSENIVNSIKNDNFTYTN 74 Query: 109 -----DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 +A+ V ++ +D S R + G +I + ++ Sbjct: 75 EVCRVKGRAGVALVTSLPVVEKRYGLPGLNEDVDS---GRWVETDVRTPEGYEITIASVY 131 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------ 217 + + D L L + ++ GDFN Sbjct: 132 VHAGNVDD--PQKMQQKFRFLDTMLIRLGELRNIAASGGNQAILCGDFNIAHTSLDIKNA 189 Query: 218 ----------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPID 258 + I+ + + + +D Sbjct: 190 KANEKSAGFLPEERAYIDRWINEYEFVDVMRMLAGDIQGPYTWWSQRGKAFDNNVGWRLD 249 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 Y + + D +S R SDH P+SI YD Sbjct: 250 YQFATPEIAESARG-------FVIDRAESYDARWSDHAPLSIKYD 287 >gi|229826178|ref|ZP_04452247.1| hypothetical protein GCWU000182_01550 [Abiotrophia defectiva ATCC 49176] gi|229789048|gb|EEP25162.1| hypothetical protein GCWU000182_01550 [Abiotrophia defectiva ATCC 49176] Length = 357 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 87/305 (28%), Gaps = 29/305 (9%) Query: 21 AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++ ++ +SWN+ G + + + + + LDAD++ LQ Sbjct: 56 SKDIKFISWNVGYCGLGKSADFFMDGGKKVVSQTKSEVDENIDKITDKLRQLDADVILLQ 115 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ + + + S A+ + + ++ Sbjct: 116 EVDRKSYRSYDMDEEKL------IGDKFSDMISSFAINLKALFIPYPIPPIRNVEAGIMS 169 Query: 133 AKDSFSRAGNRRAVELLVEINGKKI----WVLDIHLKSFCFLD-----SLENTYSPSCSL 183 + + R ++ + + + +L L +L S Sbjct: 170 LSKLKAESAERVSLPVPFKWPERTCNLKRCLLVEKLPISGSDKKLVVINLHLEAYDSGEG 229 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 Q + L D + ++ + V GDFN+ + ++ K+ + Sbjct: 230 KVAQTKALLDIMEKEYKEGNYVVAGGDFNQSFSSADLSEFEVGNKGLWKPGRIEAKDFEE 289 Query: 244 RCNANKNLR--NKIPIDYFV--MDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCP 297 N + +D D ++I + K+ G SDH P Sbjct: 290 NFNLYMDASVPTCRSLDRAYDKADNKFQYYVIDGFITSKNVEVISQKTIGLDFENSDHNP 349 Query: 298 ISIDY 302 I + Sbjct: 350 IEMVI 354 >gi|28377662|ref|NP_784554.1| exodeoxyribonuclease III [Lactobacillus plantarum WCFS1] gi|254555843|ref|YP_003062260.1| exodeoxyribonuclease III [Lactobacillus plantarum JDM1] gi|28270495|emb|CAD63397.1| exodeoxyribonuclease III [Lactobacillus plantarum WCFS1] gi|254044770|gb|ACT61563.1| exodeoxyribonuclease III [Lactobacillus plantarum JDM1] Length = 254 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 75/303 (24%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L LDAD +QE A Sbjct: 1 MKLISWNVNGLRAAVKHGF---------------VTTFNELDADFFCVQETK-LQAGQIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K+ + + D R Sbjct: 45 LDFPGYYQYWN----------YAERKGYSGTAIFTKHEPLNVTYGIGVPEFDDEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +VL + + + L + Sbjct: 91 -----VITLEYADYYVLTCYTPNSGGELKRLDYRQQWEDAFLTYINSL--------SANK 137 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + + F + + Sbjct: 138 PLIFCGDLNVAHENIDLKNWRSNHHSAGFTDEERTKFDRLLAAGYTDTFRHFYPDQTDIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ Q L+ ++ SDHCP+ Sbjct: 198 SWWSYRGHARDNNSGWRIDYFITSQQLDSQLLNARIHNEIF-----------GSDHCPVE 246 Query: 300 IDY 302 +D Sbjct: 247 LDI 249 >gi|313201147|ref|YP_004039805.1| endonuclease/exonuclease/phosphatase [Methylovorus sp. MP688] gi|312440463|gb|ADQ84569.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. MP688] Length = 241 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 44/283 (15%), Positives = 81/283 (28%), Gaps = 53/283 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL+ +NI+ +G D + + LD D +QEM + + Sbjct: 1 MRLLCFNIHGGRSLDG-----------QRDLQRIHHLMQRLDIDAGVIQEMETRPS-RGG 48 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P + + + + V L+ ++ R Sbjct: 49 QPDDVERLAGPERPFHLICPSMLEGQGWYGNLIVSRYPIVRG----LIHNLETRPSLEPR 104 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES-L 202 A + L+ + V+ HL S S +A+ L I +E Sbjct: 105 MAADALIAGPHGNLRVIGTHL-------------SLSIYERRSEARNLIRLIQAVEEETK 151 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-ANKNLRNKIPIDYFV 261 P ++ GD N + +D C +L + +D Sbjct: 152 NPLLLMGDINEWQ----RPSALLRFLDG--------HLTPVPCKATFPSLCPVLRLDRVW 199 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 E + + +RLSDH PI I+ ++ Sbjct: 200 Y--------EAEGIKITAHRIH--GNDIRRLSDHLPIVIELEW 232 >gi|228471546|ref|ZP_04056321.1| exodeoxyribonuclease III [Capnocytophaga gingivalis ATCC 33624] gi|228277122|gb|EEK15802.1| exodeoxyribonuclease III [Capnocytophaga gingivalis ATCC 33624] Length = 253 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 88/302 (29%), Gaps = 73/302 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ S+N+N + Q+ K D D++ LQE+ K Sbjct: 1 MKIFSYNVNGIRAAMSKGF---------------TQWLKAADPDVICLQEI-------KA 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 H + ++ +A+ K + + D R Sbjct: 39 LESQIDLPALEEIGYTYHYFHSAEKKGYSGVAILSKTAPTQVEVGAGIDYMDREGRI--- 95 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + ++ ++L S +D Q +++I + K++ Sbjct: 96 ------LRADYGDLSIMSLYLPSGTNID--------RLDHKLQFMADFQNYINELKKTHP 141 Query: 204 PFVIAGDFNRKINYLGNNDDF------------WKTIDP--NDSLIRFPKEKDSRCNANK 249 +I GD+N + +D K +D I + + Sbjct: 142 NLIICGDYNICHEAIDIHDPVRNANVSGFLPVERKWLDDFLKSGFIDSFRFFHKEPHNYS 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY ++ Q L++ + + SDHCPI + Sbjct: 202 WWSYRANARANNKGWRIDYCLVAQPLENRLLRAAIL-----------PEAKHSDHCPILV 250 Query: 301 DY 302 + Sbjct: 251 EI 252 >gi|170093872|ref|XP_001878157.1| predicted protein [Laccaria bicolor S238N-H82] gi|164646611|gb|EDR10856.1| predicted protein [Laccaria bicolor S238N-H82] Length = 617 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 44/324 (13%), Positives = 88/324 (27%), Gaps = 68/324 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNAV 80 V +N+ + + + + N DI+F+QE+ + Sbjct: 305 TVTFGDYNVQNMPPTG-------------AHLPAVAAHIVNYLKTPDIMFIQEVQDNSGA 351 Query: 81 AK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 N F S + +I A R + + + Sbjct: 352 KDDGVVDANVTLTNLVNSIASLSNVTYKFASINPIDGQDGGVPGGNIRVAYLYRPEKLEL 411 Query: 124 LQQS----------------------YPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWV 159 + S P + + +R+ + + ++ Sbjct: 412 VGGSPAGGSLDKTVVQGTLFNPKLNFNPGRIDPTNTAWNSSRKPLVAHWAVGPLKSSLFT 471 Query: 160 LDIHLKSFCFLDSLENTYSPSC----SLLSQQAQWLKDWITQKKESL--VPFVIAGDFNR 213 +++HL S + P + Q + +I + VIAGDFN Sbjct: 472 VNVHLASKGGSTTTNGDARPPVNSPIQARTNQISTIATFIKSLLQKNPLANIVIAGDFNE 531 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273 I F + D P+ + + +N +D+ + L + Sbjct: 532 FIQTRSVYKPFTPILSDIDDAAGIPELER---YSYVYDQNSEQLDHAFIS--LALRLKKV 586 Query: 274 SFSEILYNEDDIKSRGKRLSDHCP 297 F I N + ++SDH P Sbjct: 587 EFEHIHANT-WAPNSKSQVSDHDP 609 >gi|170721818|ref|YP_001749506.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida W619] gi|169759821|gb|ACA73137.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida W619] Length = 261 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 35/291 (12%), Positives = 82/291 (28%), Gaps = 52/291 (17%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---- 74 + ++ +++ N++ LR+ + DAD+VFLQE+ Sbjct: 16 TAVHRLNVLTINVHKGFTALNRRF----------ILPELREAVRATDADLVFLQEVHGSH 65 Query: 75 GSYNAVAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + +P+ F + + + A+ K V ++ + Sbjct: 66 EHHALRHPAWPETPQYEFLADSMWPQFAYGRNAIYPHGDHGNALLSKFPIVEHRNLDVSI 125 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + R + +++ G + V + + + +Q Sbjct: 126 HGN-----EQRGLLHCRLDVPGHE-SVHAVCVHLGLR-----------EAHRQRQVSL-L 167 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + + P ++AGDFN + + F + S + Sbjct: 168 FDLLDSLPAEAPVIVAGDFNDW-------RLKADAVLSQRLVEAFGEHFGSPARSFPARL 220 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +D + S LSDH P++ + + Sbjct: 221 PLLRLDRIYLRNAKPSKAQVLS-----------HYPWSHLSDHAPLAAEIN 260 >gi|289771097|ref|ZP_06530475.1| exodeoxyribonuclease III [Streptomyces lividans TK24] gi|289701296|gb|EFD68725.1| exodeoxyribonuclease III [Streptomyces lividans TK24] Length = 274 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 34/308 (11%), Positives = 77/308 (25%), Gaps = 71/308 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + S N+N L ++ AD++ LQE+ Sbjct: 9 LTVTSVNVNGLRAAAKKGF---------------VEWLAGTSADVLCLQEVR-------- 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + ++ H +++ + + D+ R Sbjct: 46 -AEPHQLPDHAGAPEGWHVTHAPAAAKGRAGVSLYTRREPDAVRVGFGSTEFDTSGR--- 101 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + ++ G + V ++L S ++ + L++ Sbjct: 102 ----YVEADLPG--VTVASLYLPSGEVGTERQDEKVRFMGEFLAYLKELRERA---AAEG 152 Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDP--NDSLIRFPKEKDSR 244 V+ GD+N + + +DP + Sbjct: 153 REVVVCGDWNIAHREADLKNWRANKKNSGFLPEEREWLGRVLDPAEGGYVDVVRALHPDV 212 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + IDY V ++ + + +R SDH Sbjct: 213 EGPYSWWSYRGRAFDNDAGWRIDYHVSTPGLAAKAVKGYV-------ERAATHAERWSDH 265 Query: 296 CPISIDYD 303 P+++ YD Sbjct: 266 APVTVVYD 273 >gi|284028360|ref|YP_003378291.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283807653|gb|ADB29492.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 273 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 39/301 (12%), Positives = 81/301 (26%), Gaps = 55/301 (18%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----GSYNAV 80 R+++ N+ + L+ + + L D+V LQE+ GS + + Sbjct: 4 RVLTLNVQNDVGDP-------------RRFRLINEELRRLSPDLVALQEVCYPAGSNDQL 50 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 A++ + +R + + TAIA R + + G + Sbjct: 51 AELLEGTG-LTHRTHQRDVLPDLPELFRHDGTAIATRHPHRVAEVLEHRGTGVRGDPHWW 109 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + + V++ + + +QA + + + Sbjct: 110 ----TLAVTVDLGPVGEVLAITPTTPWQLDHEY---------ARERQALDIAA-LDARHR 155 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI----- 255 + +P V+AGDFN + S+ Sbjct: 156 TALPTVLAGDFNATPDSASIRFLSGHQSLDGTSVHFHDAWTTRGEGPGHTWTTANPLARE 215 Query: 256 -------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +DY + Q + + D+ LSDH + D Sbjct: 216 EIATLIGQSPHHRRLDYIFVGSRHAHPDTQATI-----DTVDLVGVNPPLSDHYGLVADL 270 Query: 303 D 303 Sbjct: 271 T 271 >gi|256851697|ref|ZP_05557085.1| exodeoxyribonuclease III [Lactobacillus jensenii 27-2-CHN] gi|260661585|ref|ZP_05862497.1| exodeoxyribonuclease III [Lactobacillus jensenii 115-3-CHN] gi|282934219|ref|ZP_06339496.1| exodeoxyribonuclease III [Lactobacillus jensenii 208-1] gi|256615655|gb|EEU20844.1| exodeoxyribonuclease III [Lactobacillus jensenii 27-2-CHN] gi|260547642|gb|EEX23620.1| exodeoxyribonuclease III [Lactobacillus jensenii 115-3-CHN] gi|281301693|gb|EFA93960.1| exodeoxyribonuclease III [Lactobacillus jensenii 208-1] Length = 275 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 81/303 (26%), Gaps = 56/303 (18%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L+SWNI++L+ + R + DI+ +QE Sbjct: 3 LISWNIDSLNAALTSDSARAQKTRH------VLTQIAEKKPDILAIQETKLRATGPTKKH 56 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + S + + KN +YP +GA D+ G Sbjct: 57 AEILAKLFPDYEYVWRSSEEPARKGYAGTMYLYKNTLEPVVTYPTIGAPDTMDFEGR--- 113 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++ + + +V ++ + + Q L + P Sbjct: 114 ---IITLEFPEYFVTQVYTPNAGGELKRLGDRQGWDKKYIEYLQKL--------DKEKPV 162 Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + +GD+N + + F K + Sbjct: 163 LASGDYNVAHEEIDLKHPENNHHSAGFTDEERADFTELLSTGFTDSFRKIHGNIPEVYSW 222 Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY++ + + ++ G+R DHCPI + Sbjct: 223 WAQRIKTAKANNSGWRIDYWLTSNRIADKIKKS----------EMMDTGERA-DHCPIVL 271 Query: 301 DYD 303 + D Sbjct: 272 EID 274 >gi|283955677|ref|ZP_06373170.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 1336] gi|283792902|gb|EFC31678.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 1336] Length = 252 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 81/304 (26%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + D + QE+ A Sbjct: 1 MKLLSWNVNGLRAICDKNA---------------LDWIAQEKIDFIGFQEI---KAHEDK 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FPK + + + + ++ + +++ + F R Sbjct: 43 FPKKIYEYPFKHMYFNSAKRA-----GYSGVMSLCNFDSEVKK-------CEFFDDEEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++E K I + +I+ + + + + ++ + + Sbjct: 91 -----VLEHRFKNIALFNIYFPNGQKDEER-------LNFKMKFYADFLAYLDKLLKDGF 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GD N L + + + F + Sbjct: 139 EIIICGDVNTAHKEIDLTHPKANVNTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + L + ++ SDH P+ Sbjct: 199 SWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFIRDDIF-----------GSDHAPVG 247 Query: 300 IDYD 303 I+ D Sbjct: 248 IEID 251 >gi|240277984|gb|EER41491.1| endonuclease/exonuclease/phosphatase [Ajellomyces capsulatus H143] Length = 330 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 84/303 (27%), Gaps = 28/303 (9%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +RL+++N+ ++ G K +R + T + D V +QE+ Sbjct: 36 PFPNKSLSLRLMTFNVRYAAKPSGN--EKAWSERRGNLITQVAYEMGATDNVFVGMQEVL 93 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSN--NDIHTAIAVRKKNVRVLQQSYPL--- 130 V N+ + RD + ++ I RK +++ Sbjct: 94 HNQLEDIVNGLNSHPSSGGNDWAYIGVGRDDGKQSGEYSPILYRKSLWELVEMDTKWLSE 153 Query: 131 -LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 A NRR V + V N + + + ++ Sbjct: 154 TPDVPSYGWGATNRRIVTIGVFRNKRTKAMALVMNTHL---------DHQVSEARLHGSE 204 Query: 190 WLKDWITQKKESLVP------FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + I K ++ GDFN + I + K Sbjct: 205 LILKLIGDYKNKRQYKCKLTGVILTGDFNSEEGQEAYKVVTESKILVDPVKKFGDKNIYG 264 Query: 244 RCNANKNLRN---KIPIDYFVMD-QNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPI 298 + IDY + N + + ++ Y + G SDH + Sbjct: 265 NRKTFTGFDSEVGLTRIDYVFVGQGNLCGWGDKGTWDVNRYAVLPNKFDDGIFFSDHRAV 324 Query: 299 SID 301 D Sbjct: 325 VAD 327 >gi|148539953|ref|NP_079994.2| deoxyribonuclease-1-like 2 precursor [Mus musculus] gi|59797962|sp|Q9D1G0|DNSL2_MOUSE RecName: Full=Deoxyribonuclease-1-like 2; AltName: Full=Deoxyribonuclease I-like 2; Short=DNase I-like 2; Flags: Precursor gi|12834394|dbj|BAB22893.1| unnamed protein product [Mus musculus] gi|76779307|gb|AAI06189.1| Dnase1l2 protein [Mus musculus] Length = 278 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 85/287 (29%), Gaps = 35/287 (12%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78 A +R+ ++N+ + + + SV + Q DI +QE+ + Sbjct: 19 ATALRIGAFNVQSFGDNKVSDPDCGSV---------IAQILAGY--DIALVQEVRDPDLS 67 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 AV+ + + + + + RK V +Y +D Sbjct: 68 AVSLLMEQINRVSKHEYGFVSSKPLGRDQYKEMYLFVYRKDVASV-VSTYQYPDPED--- 123 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 A +R + + L + + +L + W Sbjct: 124 -AFSREPFVVKFSVPS----CATKELVLIPLHAAPHQAVAEIDALYDVYLDVIDKW---- 174 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + + GDFN Y+ +D + ++ + N + D Sbjct: 175 --NTDDMLFLGDFNADCKYVKAHDWPSIRLRSSEVFKWLIPDSADTTVGNSDCAY----D 228 Query: 259 YFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 V+ + L S S + E+ + + L SDH P+ + + Sbjct: 229 RIVVSGAHLRRSLKPHSASVHNFQEEFDLDQTQALAISDHFPVEVTF 275 >gi|21221611|ref|NP_627390.1| exodeoxyribonuclease [Streptomyces coelicolor A3(2)] gi|6138859|emb|CAB59670.1| putative exodeoxyribonuclease (EC 3.1.11.2) (putative secreted protein) [Streptomyces coelicolor A3(2)] Length = 274 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 34/308 (11%), Positives = 78/308 (25%), Gaps = 71/308 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + S N+N L ++ AD++ LQE+ Sbjct: 9 LTVTSVNVNGLRAAAKKGF---------------VEWLAGTSADVLCLQEVR-------- 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + ++ H +++ + + D+ R Sbjct: 46 -AEPHQLPDHAGAPEGWHVTHAPAAAKGRAGVSLYTRREPDAVRVGFGSTEFDTSGR--- 101 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + ++ G + V ++L S ++ + L++ + Sbjct: 102 ----YVEADLPG--VTVASLYLPSGEVGTERQDEKVRFMGEFLAYLKELRERAAAQ---G 152 Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDP--NDSLIRFPKEKDSR 244 V+ GD+N + + +DP + Sbjct: 153 REVVVCGDWNIAHREADLKNWRANKKNSGFLPEEREWLGRVLDPAEGGYVDVVRALHPDV 212 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + IDY V ++ + + +R SDH Sbjct: 213 EGPYSWWSYRGRAFGNDAGWRIDYHVSTPGLAAKAVKGYV-------ERAATHAERWSDH 265 Query: 296 CPISIDYD 303 P+++ YD Sbjct: 266 APVTVVYD 273 >gi|148643539|ref|YP_001274052.1| exodeoxyribonuclease, XthA [Methanobrevibacter smithii ATCC 35061] gi|222444963|ref|ZP_03607478.1| hypothetical protein METSMIALI_00579 [Methanobrevibacter smithii DSM 2375] gi|261350463|ref|ZP_05975880.1| exodeoxyribonuclease III [Methanobrevibacter smithii DSM 2374] gi|148552556|gb|ABQ87684.1| exodeoxyribonuclease, XthA [Methanobrevibacter smithii ATCC 35061] gi|222434528|gb|EEE41693.1| hypothetical protein METSMIALI_00579 [Methanobrevibacter smithii DSM 2375] gi|288861246|gb|EFC93544.1| exodeoxyribonuclease III [Methanobrevibacter smithii DSM 2374] Length = 257 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 39/308 (12%), Positives = 88/308 (28%), Gaps = 80/308 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--V 80 V+LVSWN+N + + + + +ADI+ QE+ + Sbjct: 2 SVKLVSWNVNGIRAASKKPEFWDW--------------FNSTNADIINFQEVRATEDSIP 47 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K+ + +++ +S + + I VR V L + Sbjct: 48 EKLTDVAGFNSYFNEAEKKGYSGVGTFSKIKPENVVRGLGVEALDREGR----------- 96 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 ++ + + +I+ + + C+ L D + K Sbjct: 97 --------VLRLEYSDFTLFNIYFPNSGMNAKRLDYKIDFCN-------ALLDLLEDLKN 141 Query: 201 SLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 +I GD N N + + + + + D Sbjct: 142 QGQNLIITGDVNIAHNPIDVYNPANCEGKSGYLIEEREWLDDLLASG--FVDTFRMFDDS 199 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + +DYF +++ + + ++ SDH Sbjct: 200 GDNFTWWSYRTRARDRNAGWRLDYFFVNEEFKNKVKSATIKNDVF-----------GSDH 248 Query: 296 CPISIDYD 303 CP++++ D Sbjct: 249 CPVTLELD 256 >gi|159042592|ref|YP_001531386.1| exodeoxyribonuclease III [Dinoroseobacter shibae DFL 12] gi|157910352|gb|ABV91785.1| exodeoxyribonuclease III [Dinoroseobacter shibae DFL 12] Length = 262 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 33/307 (10%), Positives = 77/307 (25%), Gaps = 73/307 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + + +WNIN R +D + + ++ D++ LQE S Sbjct: 2 SITIATWNIN--------------SVRLRADL--VARLLRDEAPDVLCLQECKSPVD--- 42 Query: 83 VFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 I T + + +A+ + +G D+ Sbjct: 43 -------KIPLETFAARGYGHMVARGQKGYNGVAILSRLPLEDAGHRDFVGKGDARH--- 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 V +E + + + ++ + D + + ++ W T Sbjct: 93 ----VAARLENG---LTIHNYYVPAG--GDVPDRDVNEKFGHKLDFLAEMRAWFTDTAPE 143 Query: 202 LVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 V+ GD N ++ D ++T + + + Sbjct: 144 KS--VLVGDLNIAPREDDVWSHKQLLKVVSHTPIEVDTFETTREAGNWVDVTRADIPEGQ 201 Query: 247 ANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ + + + SDH Sbjct: 202 LYSWWSYRARDWSAADKGRRLDHVW-------ASADIAAAAHGSRILREVRGWDQPSDHA 254 Query: 297 PISIDYD 303 P+ +D Sbjct: 255 PVFASFD 261 >gi|325919422|ref|ZP_08181448.1| Exodeoxyribonuclease III [Xanthomonas gardneri ATCC 19865] gi|325550088|gb|EGD20916.1| Exodeoxyribonuclease III [Xanthomonas gardneri ATCC 19865] Length = 326 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 41/296 (13%), Positives = 79/296 (26%), Gaps = 70/296 (23%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 ++ ++N+N S L ++ + DIV LQE+ A + F Sbjct: 7 KIATFNVNG----------------IHSRLPHLLEWLQREQPDIVGLQEL---KATQEAF 47 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 P+ R + +A+ + + P+ + G+R+ Sbjct: 48 PE-------QAIRDAGYGVIWQGEKSWNGVALLAR------GADPVEIRRGLPWDPGDRQ 94 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + L I+G + V ++L + + Y + Q L E P Sbjct: 95 SRYLEAAIHG--VVVACLYLPNGNPQPGPKFDYKLA------WFQRLIRHAKTLVELPHP 146 Query: 205 FVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNANK 249 + GDFN D + + Sbjct: 147 VALIGDFNVVPTDADIYDPKGWRKDALLQPESRQAYAALLQQGWTDSLLAVHGDTPIYTF 206 Query: 250 NLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ +++ L D ++ SDH P Sbjct: 207 WDYFRQHFARDRGLRIDHLLLNCTLAPGLQDAGV-------DKWVRALEKASDHAP 255 >gi|258545737|ref|ZP_05705971.1| endonuclease/exonuclease/phosphatase family protein [Cardiobacterium hominis ATCC 15826] gi|258518982|gb|EEV87841.1| endonuclease/exonuclease/phosphatase family protein [Cardiobacterium hominis ATCC 15826] Length = 239 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 36/288 (12%), Positives = 71/288 (24%), Gaps = 58/288 (20%) Query: 24 VRLVSWNIN-------TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R++S+NI LS + Y D+V LQE+ Sbjct: 1 MRILSYNIQAAINARSYLSYTWQWHRQILPGPAKRKTLARIAAYISQF--DLVCLQEIDL 58 Query: 77 YNAVAKVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 S + R + K + PL Sbjct: 59 GGLRNGFLNHVEQLRDLSGLPYALAQTNRRLGKLSLHGNLILSKTPLREVLNQPLPS--- 115 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R R + VE + V ++HL Q +++++ + Sbjct: 116 ---RIPGRGVLAAAVESTHGALVVANVHLSLGALDQHR-------------QLRFIRNRL 159 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + +I GD+N + + + + + + + Sbjct: 160 AAWPD----VLITGDYNCTPDAPQ-----LRILAEHGYRSLGDASP-----TFPSWKPQK 205 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D+ + + SDH P I+ D Sbjct: 206 ALDHAFLKGGLTARSHVSPQRD---------------SDHLPRVIELD 238 >gi|325690669|gb|EGD32670.1| exodeoxyribonuclease [Streptococcus sanguinis SK115] Length = 275 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 82/305 (26%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q + +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLS------QAVLQTLQAENADIIAIQETKLSATGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K ++P +GA + G Sbjct: 55 KHLEILTNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E +G +V ++ + + ++ L Sbjct: 114 ---IITLEFDG--FFVTQVYTPNAGDGLKRLDDRQVWDVKYAEYLATLDQ--------QK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F N Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 VMEIE 274 >gi|319787682|ref|YP_004147157.1| exodeoxyribonuclease III Xth [Pseudoxanthomonas suwonensis 11-1] gi|317466194|gb|ADV27926.1| exodeoxyribonuclease III Xth [Pseudoxanthomonas suwonensis 11-1] Length = 267 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 34/297 (11%), Positives = 77/297 (25%), Gaps = 70/297 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L ++N+N + L + + D+V LQE+ + + Sbjct: 9 LKLATFNVNGIGP----------------RLPHLLLWLEREQPDVVALQELKARDEA--- 49 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ + V ++ L G + S + +R Sbjct: 50 -------FPAAEIEAAGYGAIWHGEHRWNGVALLGRGVTPIESRRGLPGDR---SDSQSR 99 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V ++L + + Y + L + + Sbjct: 100 YIEAAV-----HGVVVGALYLPNGNPQPGPKFDYK------LKWMARLARHVATLVDLPH 148 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GDFN D + + + Sbjct: 149 PAVLMGDFNVIPTDEDVYDPKSWKRDALIQPEVREAYAKLLAQGWTDALREVYGEERVYT 208 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ +++ L + D ++ SDH P Sbjct: 209 FWDYFRQHFERDRGLRIDHLLLNPALAPGLEEAGV-------DRWVRALEKPSDHAP 258 >gi|227539509|ref|ZP_03969558.1| endonuclease/exonuclease/phosphatase family protein [Sphingobacterium spiritivorum ATCC 33300] gi|227240574|gb|EEI90589.1| endonuclease/exonuclease/phosphatase family protein [Sphingobacterium spiritivorum ATCC 33300] Length = 348 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 39/349 (11%), Positives = 82/349 (23%), Gaps = 64/349 (18%) Query: 1 MIRKYVLALVFFLVPC-----TASVAQKVRL---VSWNINTLSEQEGVSLWKN------- 45 M + Y +L + + + +K ++ +N+ L + E +L + Sbjct: 2 MKKTYFWSLCILFIFVVQTHISVAQQKKYQVYAAAFYNLENLFDTEKDTLINDEEFTAEG 61 Query: 46 ----SVKRTTSDYTLLRQYAKNLD-------ADIVFLQEMGSYNAVAKVFPKNTWCIFYS 94 + ++ + + L V L E+ + + + S Sbjct: 62 GNRWTAEKYRRKQLNMAKVISRLGKKYCPAGPAFVGLCELENRKVLEDL---TQQPSLVS 118 Query: 95 TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 I H + A+ +V D R + + E+ G Sbjct: 119 LGYGIVHYDSPDRRGVDVALLYNPSLFKVKDSKV-FAYKVDHLPEYRTRDILLVTGELAG 177 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFN 212 +++ VL H S S L A ++ + VI GD N Sbjct: 178 EEMHVLVNHWPSRYGG--------KSSELREHAASIVRSVVDSLYAQDSLAKVVIMGDLN 229 Query: 213 RKINYLGNNDDF-----WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 + + + D + D ++ + Sbjct: 230 DDPVDKSVRIVLNAKKTQQEVAKGGLFNTMWQHYDRGVGSLGYQGKWNLFDQIIISEPLL 289 Query: 268 KFLIQ-------------------ESFSEILYNEDDIKSRGKRLSDHCP 297 + + SDH P Sbjct: 290 GEDRSTLKFWKSEIYNPEFLITQEGRYKGYPFRTFSGNVFQNGYSDHFP 338 >gi|313498066|gb|ADR59432.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida BIRD-1] Length = 264 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 39/292 (13%), Positives = 85/292 (29%), Gaps = 50/292 (17%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM- 74 A +++R+++ N + LR+ ++ ADIVFLQE+ Sbjct: 14 SQAPAVKRLRVLTVNTHKGFTAFNRRF----------ILPELREAVRSTQADIVFLQEVL 63 Query: 75 ---GSYNAVAKVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 + A +P+ + F + + + + D H A+ K + ++ Sbjct: 64 GSHDRHAARYPGWPQTSQYEFLADSMWSDFAYGRNAVYPDGHHGNALLSKYPIIEHRNLD 123 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + R + ++E+ G+ S + L Sbjct: 124 VSITG-----PERRGLLHCVLEVPGQGQVHAVCVHLSLLESHRQKQLQLLRKLL------ 172 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + P +IAGDFN ++ + + F + Sbjct: 173 -------DALPANAPVIIAGDFNDWKSHGNRTLGLQRDLHE-----AFERHHGHLARTYP 220 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + +D + + + LSDH P++++ Sbjct: 221 ARLPLLRLDRIYLRNA-----ESHGPRILGHK------PWSHLSDHLPLAVE 261 >gi|258545109|ref|ZP_05705343.1| exodeoxyribonuclease III [Cardiobacterium hominis ATCC 15826] gi|258519628|gb|EEV88487.1| exodeoxyribonuclease III [Cardiobacterium hominis ATCC 15826] Length = 258 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 77/302 (25%), Gaps = 73/302 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++++N N + + Q+ DAD V +QE + + ++ Sbjct: 2 FKIITFNANGIRAAARKGFF---------------QWLNAQDADAVCIQE--TKAQLPQL 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 T+ F ++ +A+ K+ Q DS R Sbjct: 45 EGDATYFPFAHNHYHDAE------KKGYSGVALYLKHPPQAVQHGIGWAEIDSEGRY--- 95 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E ++ +++ S + + L W+ + + Sbjct: 96 ------LEARYPGFSLISLYMHSGTSGEERQAKKEA-------FMAKLAPWLNARAAAGE 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249 ++ GD N + + + Sbjct: 143 RLILCGDINIAHTEKDLKNWKGNLKNSGFLPQERAWLTDLFAGEFRDAFRLVHPDAEQYT 202 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY ++ QN + S + SDH P+ + Sbjct: 203 WWSQRGNARANNVGWRIDYHIISQNLAGQVESASV-----------YTDENFSDHAPLIL 251 Query: 301 DY 302 Y Sbjct: 252 TY 253 >gi|251792134|ref|YP_003006854.1| metal-dependent hydrolase [Aggregatibacter aphrophilus NJ8700] gi|247533521|gb|ACS96767.1| metal-dependent hydrolase [Aggregatibacter aphrophilus NJ8700] Length = 263 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 89/298 (29%), Gaps = 54/298 (18%) Query: 24 VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNA 79 ++L++ N++ L + ++ DIV LQE+ S A Sbjct: 1 MKLLTLNVHAWLEDN------------QAEKIDIIADTIVEKGYDIVALQEVNQLMSAPA 48 Query: 80 VAKVFPKNTWCIFY---------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 +++ ++ + + L + + IA + ++ Sbjct: 49 ISQALKQDNYGVVLLNKINQRATQKYSLFWSNSHIGYDKYDEGIAFLTRLPVYEVDAF-Y 107 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 +R+ + L VE G+ + H+ Q Sbjct: 108 CSQHQRLDSILSRKILGLTVEYQGQLVDCYSCHINLPNCAGE-------------NQLDN 154 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC----- 245 +++ + + + + ++ GDFN N K++ D+ ++ Sbjct: 155 IRNIVERSQSRNLK-ILMGDFNTDAISDPNAYQKIKSLGLLDTFEMAEQKDSGITVEKAI 213 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + K + +DY ++Q Q F+ +SDH + ++ Sbjct: 214 DGWKGHSEEKRLDYIFLNQAKRVLSSQVVFNGKNKPV---------VSDHFGLEVELT 262 >gi|225557341|gb|EEH05627.1| endonuclease/exonuclease/phosphatase [Ajellomyces capsulatus G186AR] Length = 330 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 84/303 (27%), Gaps = 28/303 (9%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +RL+++N+ ++ G K +R + T + D V +QE+ Sbjct: 36 PFPNKSLSLRLMTFNVRYAAKPSGN--EKAWSERRGNLITQVAYEMGATDNVFVGMQEVL 93 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSN--NDIHTAIAVRKKNVRVLQQSYPL--- 130 V N+ + RD + ++ I RK +++ Sbjct: 94 HNQLEDIVNGLNSHPSSGGNDWAYIGVGRDDGKQSGEYSPILYRKSLWELVEMDTKWLSE 153 Query: 131 -LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 A NRR V + V N + + + ++ Sbjct: 154 TPDVPSYGWGATNRRIVTIGVFRNKRTRAMALVMNTHL---------DHQVSEARLHGSE 204 Query: 190 WLKDWITQKKESLVP------FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + I K ++ GDFN + I + K Sbjct: 205 LILKLIGDYKNKRQYKCKLTGVILTGDFNSEEGQEAYKVVTESKILVDPVKKFGDKNIYG 264 Query: 244 RCNANKNLRN---KIPIDYFVMD-QNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPI 298 + IDY + N + + ++ Y + G SDH + Sbjct: 265 NRKTFTGFDSEVGLTRIDYVFVGQGNLCGWGDKGTWDVNRYAVLPNKFDDGIFFSDHRAV 324 Query: 299 SID 301 D Sbjct: 325 VAD 327 >gi|150008485|ref|YP_001303228.1| hypothetical protein BDI_1871 [Parabacteroides distasonis ATCC 8503] gi|149936909|gb|ABR43606.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] Length = 304 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 91/331 (27%), Gaps = 55/331 (16%) Query: 2 IRKYVLALVFFLVPCTASVA-----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 +RK L + C A A V++ S+NI L+ G + Sbjct: 1 MRKISEILCCVAILCCALSACSDKPATVKVSSFNI-WLNTLGGKLPP-----------SQ 48 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + + DIV +QE ++ ++ + E + N I Sbjct: 49 TAKVIEASQTDIVGIQE-------GHIYEEDGIKHDHVPEIAESLGFHLFNQGEGHYILS 101 Query: 117 RKKNVRVLQQSY--PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 R V Y + KD F N + + + I + F+D+ E Sbjct: 102 RYPVVDSTASRYGVKIQVGKDKFCWMFNCHLYYI----PYQPYQLNGIPYGDYPFIDTEE 157 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD----------- 223 + ++ + I Q + P + GDFN Sbjct: 158 EAVRFANEARREEVTRYQKDIQQVMKEGYPVFLTGDFNEPSFLDWTQRAADADIHKIKVE 217 Query: 224 -----FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQE 273 + I NDS ++ S +D+ + + + Sbjct: 218 WPATKAFSEIGMNDSYRTIHPDEVSTPGYTWTPVPSEQDILDRLDFVLYSG----CKVTD 273 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 SF SDH ++ ++F Sbjct: 274 SFITGESEATSDVVVSPYPSDHRMVTSCFNF 304 >gi|227505913|ref|ZP_03935962.1| exonuclease III [Corynebacterium striatum ATCC 6940] gi|227197435|gb|EEI77483.1| exonuclease III [Corynebacterium striatum ATCC 6940] Length = 269 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 29/294 (9%), Positives = 76/294 (25%), Gaps = 47/294 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WNIN + D D++ LQE + Sbjct: 1 MRIATWNIN----------------SVRTRVQRAVDLLAKHDIDVLCLQETKVADD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ K+ + + + Sbjct: 41 ------KFPVMDFEAAGYHVTHHGLNQWNGVAIVSKSEPEEVFTSFPGQPGFAKDPEKPQ 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-------PSCSLLSQQAQWLKDWIT 196 V + + + +++ + + Y + Q++ L Sbjct: 95 NLEARAVGARIRGVEIWSLYVPNGREITDRHYAYKLQFLYALARYAESRAQSKLLLTGDF 154 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--- 253 F K + ++ ++ + + + + ++ Sbjct: 155 NIAPRDEDVWDIEAFRGKTHVTEPERAAFQMLEEAGLEEVTRRFTEEQRWTYFDYKSLRF 214 Query: 254 ----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ID+ + ++ + D ++ G + SDHC + DYD Sbjct: 215 QKNEGMRIDFQLASRSLA-------ATVQSAQVDMVERAGDKTSDHCLLLADYD 261 >gi|50913711|ref|YP_059683.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS10394] gi|50902785|gb|AAT86500.1| Exodeoxyribonuclease III [Streptococcus pyogenes MGAS10394] Length = 303 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 37/328 (11%), Positives = 90/328 (27%), Gaps = 57/328 (17%) Query: 3 RKYVLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 + +++ + + + +++L+SWNI++L+ + + R + Sbjct: 7 KSLIVSFFVTITTRLSVRKRCQMKLISWNIDSLNAALTGESPRALLSR------AVLDTL 60 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 DADI+ +QE ++ + S + + KN Sbjct: 61 VAQDADIIAIQETKLSAKGPTKKHIEALLSYFPNYLHVWRSSVEPARKGYAGTMFLYKNT 120 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 ++P + A + G ++ + + +V ++ + + Sbjct: 121 LNPVITFPEIDAPTTMDAEGR------IITLEFEDFFVTQVYTPNAGDGLRRLDDRQIWD 174 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWK 226 + L ++ P + GD+N R + + Sbjct: 175 HKYADYLTEL--------DAQKPVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERQGFT 226 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFS 276 + F + + IDY++ + + Sbjct: 227 NLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGWRIDYWLASNRLVDKVKRSEMI 286 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYDF 304 + DH PI +D DF Sbjct: 287 SSGERQ-----------DHTPILLDIDF 303 >gi|319790980|ref|YP_004152620.1| exodeoxyribonuclease iii xth [Variovorax paradoxus EPS] gi|315593443|gb|ADU34509.1| exodeoxyribonuclease III Xth [Variovorax paradoxus EPS] Length = 267 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 81/311 (26%), Gaps = 77/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +L S N+N L + + + L D + +QE+ Sbjct: 2 FKLTSLNLNGLRS---------------AATKGVADWVAELAPDCICMQEIR-------- 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + A+ K+ ++G D+ A R Sbjct: 39 VQASDIEGRFEEMAGLKGHFHFAEKKGYAGTAIYTKHAPSQV----IVGWGDAEFDAEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +EL + +K V+ + S + + L + Sbjct: 95 Y-LELRFDTPKRKFSVISCYFPSGSSGEERQLAKFRFLKGFFPHLVAL--------KKER 145 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPN----DSLIRFPKEKDS 243 FV+ GD N K +D + + K Sbjct: 146 EFVLCGDINIAHQQIDLKNWRSNQKNSGFLPEERAWMTKLLDAGAEGAGLVDVYRMLKPE 205 Query: 244 RCN-ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + A N+ +DY + E + + S Sbjct: 206 TTDEAYTWWSNRGQAYANNVGWRLDYHLATPKTAALARTEQI-----------FKTIKFS 254 Query: 294 DHCPISIDYDF 304 DH PI++DYDF Sbjct: 255 DHAPITVDYDF 265 >gi|227522924|ref|ZP_03952973.1| exodeoxyribonuclease III [Lactobacillus hilgardii ATCC 8290] gi|227089953|gb|EEI25265.1| exodeoxyribonuclease III [Lactobacillus hilgardii ATCC 8290] Length = 252 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 32/301 (10%), Positives = 73/301 (24%), Gaps = 78/301 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + + LDAD +QE Sbjct: 1 MKFISWNVNGLRAVVKKDF---------------AEIFQKLDADFFCIQETKMQEG-QLK 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S + PL + + + Sbjct: 45 LDLPGYRQYFNYAERKGYSGTAIF-----------------AKDEPLTVSYGIQAPEFDH 87 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E +++ ++ + + L +S Sbjct: 88 EGRAITLEYPN--FYLVTSYVPNSGAKLKRLDFRMGWDKAFHAYLNQL--------DSHK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F + + Sbjct: 138 PVILCGDLNVAHHEIDLKNPQSNHHNAGFTDEERQSFTKLLDQGFMDTFRHFYPDKEDIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV + + ++ SDHCP+ Sbjct: 198 SWWSYRFHSRDRNAGWRIDYFVTSKRLADHISDSKILTDIF-----------GSDHCPVE 246 Query: 300 I 300 + Sbjct: 247 L 247 >gi|332358812|gb|EGJ36635.1| exodeoxyribonuclease [Streptococcus sanguinis SK355] Length = 275 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 84/305 (27%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q + +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLS------QAVLQTLQAENADIIAIQETKLSATGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K ++P +GA + G Sbjct: 55 KHVEILTKLFPEYENTWRSSQEPARKGYAGTMFLYKKELKPTITFPEIGAPSTMDVEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E +G +V ++ + + + ++ L + Sbjct: 114 ---IITLEFDG--FFVTQVYTPNAGDGLKRLDDRQVWDAKYAEYLATL--------DEQK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F N Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 VMEIE 274 >gi|320165253|gb|EFW42152.1| endonuclease/exonuclease/phosphatase [Capsaspora owczarzaki ATCC 30864] Length = 641 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 33/307 (10%), Positives = 94/307 (30%), Gaps = 41/307 (13%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSYNAVA 81 +R+ +N+ L ++ + D + Q +++ +DI+ QE+ + Sbjct: 3 LRVGQFNLLNLVKENVKFYCGEMYTKEQVDLKVNWIAQQLRHMKSDILGFQEVFHEEVLR 62 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL------QQSYPLLGAKD 135 + + + + R V +S + + Sbjct: 63 RAIA----QSGIYSADTQLILFGAEGSGPRVGLLSRYPVVDTEEIHEFPPESLIEIDSHI 118 Query: 136 SFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL--- 191 + R + +V + G + V +HLKS + + + + QA+ L Sbjct: 119 IPVKKFYRPVLRCVVRLPTGDLVTVFCLHLKSQRPMVDSAHRHDLKAKAI-GQAKSLVIR 177 Query: 192 --------KDWITQKKESLVPFVIAGDFNRKINYL----------------GNNDDFWKT 227 +T+ + + P ++ GD N ++ + + W Sbjct: 178 AAESAAVRCILVTEMRNNARPVIVCGDLNDVVHSVTTEIVTGTPPFKNMKFEQKEQIWDA 237 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + + + ++ + ++ + + +D+ ++ Q + + Sbjct: 238 LLWSTNEVQVRQSDRDVTYSHIHNGRYLVLDHILVSQEFVRTNPNRIGYVQFLTILNDHL 297 Query: 288 RGKRLSD 294 + +SD Sbjct: 298 IDETMSD 304 >gi|313885686|ref|ZP_07819435.1| exodeoxyribonuclease III [Eremococcus coleocola ACS-139-V-Col8] gi|312619051|gb|EFR30491.1| exodeoxyribonuclease III [Eremococcus coleocola ACS-139-V-Col8] Length = 275 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 82/305 (26%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + R + Q NL+ DI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSNRALLSRD------VLQTILNLNPDIIAIQETKLSAKGPTQ 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ S + + K+ + ++P + A G Sbjct: 55 KHLEILADLFKDYMVVWRSSEEPARKGYAGTMFLYKHDLEPKVTFPEIEAPSPMDAEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V ++ + + L Sbjct: 114 -----MITLEFDDFYVTQVYTPNAGNALKRLADRQIWDQQYAAYLASLDQ--------DK 160 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + GDFN + + + + F A Sbjct: 161 IVLATGDFNVAHHEIDLAHPENNHHSAGFTDEERAGFTQLLAHGFTDTFRHLHGDVTGAY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY+++ A +IQ + + DH PI Sbjct: 221 TWWAQRVKTSKINNSGWRIDYWLVSNRAVDRVIQSEIIDSGTRQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 LLEID 274 >gi|308179822|ref|YP_003923950.1| exodeoxyribonuclease III [Lactobacillus plantarum subsp. plantarum ST-III] gi|308045313|gb|ADN97856.1| exodeoxyribonuclease III [Lactobacillus plantarum subsp. plantarum ST-III] Length = 254 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 75/303 (24%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L LDAD +QE A Sbjct: 1 MKLISWNVNGLRAAVKHGF---------------VTTFNELDADFFCVQETK-LQAGQIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K+ + + D R Sbjct: 45 LDFPGYYQYWN----------YAERKGYSGTAIFTKHEPLNVTYGIGVPEFDDEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +VL + + + L + Sbjct: 91 -----VITLEYADYYVLTCYTPNSGGELKRLDYRQQWEDAFLTYINSL--------SANK 137 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + + F + + Sbjct: 138 PLIFCGDLNVAHENIDLKNWHSNHHSAGFTDEERTKFDRLLAAGYTDTFRHFYPDQTDIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ Q L+ ++ SDHCP+ Sbjct: 198 SWWSYRGHARDNNSGWRIDYFITSQQLDSQLLNARIHNEIF-----------GSDHCPVE 246 Query: 300 IDY 302 +D Sbjct: 247 LDI 249 >gi|302877288|ref|YP_003845852.1| exodeoxyribonuclease III Xth [Gallionella capsiferriformans ES-2] gi|302580077|gb|ADL54088.1| exodeoxyribonuclease III Xth [Gallionella capsiferriformans ES-2] Length = 254 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 78/305 (25%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VA 81 +R++S N+N + + ++ DAD++ LQE+ + A Sbjct: 1 MRIISVNLNGIRSASSKGFY---------------EWLAQQDADVICLQELKAQAADMTE 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + ++ +S + +G A Sbjct: 46 HMLTPLGYHGYFHYAEKKGYSGVGIYCRELPKNVI--------------VGLGIEQFDAE 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + V+ ++L S + + + L+ S Sbjct: 92 GRY-----LCADFADYSVVSLYLPSGSSGEERQGVKFSFMEAFLPHLRELRA-------S 139 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD+N L + + + + Sbjct: 140 GREVIVCGDWNIAHKEIDLKNWRGNKKNSGFLPEERAWLTQLFDEVGFVDVFRRVHPELE 199 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 A N+ IDY + S + +R SDH P Sbjct: 200 AYTWWSNRGQAWAKNVGWRIDYQIATPAIAGRATSASI-----------YKEQRFSDHAP 248 Query: 298 ISIDY 302 + IDY Sbjct: 249 LIIDY 253 >gi|218961468|ref|YP_001741243.1| Exonuclease III [Candidatus Cloacamonas acidaminovorans] gi|167730125|emb|CAO81037.1| Exonuclease III [Candidatus Cloacamonas acidaminovorans] Length = 256 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 80/303 (26%), Gaps = 81/303 (26%) Query: 28 SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFP 85 SWN+N L + + DI+ +QE + + ++ Sbjct: 7 SWNVNGLRAALNKGF---------------IEIIQKEQPDILGIQETKLQEHQIPEELNT 51 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 N + I++S +S LL S Sbjct: 52 LNEYLIYWSHSLRKGYSGTGLFTK--------------------LLPLSFSTGFGNPEFD 91 Query: 146 VELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 E + I + +I+ + D N + + +K+ S Sbjct: 92 NEGRINIAEYTEFIFFNIYFPNGQKDDERLNYKLRFYDRC-------LEVMEEKRTSGKI 144 Query: 205 FVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GDFN + +L + I + F S Sbjct: 145 ILVGGDFNTAHHPIDLANPKENEKTSGFLPIERAWLDKIAEMGWIDTFRYFDKSPE-QYT 203 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +DYF +++ + + + + SDHCP+ + Sbjct: 204 WWSYRTKARPRNVGWRLDYFWVNKEGIEHIKKAGIRQ-----------DIEGSDHCPVFV 252 Query: 301 DYD 303 + + Sbjct: 253 ELE 255 >gi|322373458|ref|ZP_08047994.1| exodeoxyribonuclease III [Streptococcus sp. C150] gi|321278500|gb|EFX55569.1| exodeoxyribonuclease III [Streptococcus sp. C150] Length = 275 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 79/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + R + +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLSR------KVIDTLVAENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ S + + K +YP +GA + G Sbjct: 55 KHLQILEDYFPDYDNTWRSSVEPARKGYAGTMFLYKKELTPVITYPEIGAPSTMDCEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V ++ + + L ++ Sbjct: 114 -----IITLEFDNFFVTQVYTPNAGDGLKRLLERQIWDEKYADYLAEL--------DAQK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + + A Sbjct: 161 PVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERTGFTNLLTKGFTDTYRHLNGDVTGAY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGDRQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 VLEID 274 >gi|269127384|ref|YP_003300754.1| endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM 43183] gi|268312342|gb|ACY98716.1| Endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM 43183] Length = 466 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 39/292 (13%), Positives = 86/292 (29%), Gaps = 35/292 (11%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + ++++NI L + S ++ + DIV +QE +Y+ Sbjct: 55 SGAFSVLTYNIAGLPDFLSGSHPSRNIPLISPRLA---------PYDIVHVQEDFNYHRA 105 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + + S + + + + + +G D + Sbjct: 106 LYAGDNHPYRT-----PTSGIAGIGSGLNTLSNFPYDTGDFQRVTWKDCYIGTGDCLTPK 160 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 G + G + ++H + S + + L +I + Sbjct: 161 G--FTFMRVRLAEGVYVDFYNLHADAGS--------TSRDIAARNANLDQLTAFIQKH-S 209 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA--------NKNLR 252 S V+ GD N + G + + + + + Sbjct: 210 SGNAVVVMGDTNTRYTRTGERIRQFAAANGLTDVWVSLIRGGTPPPEGGPAPACDTATVD 269 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 N +D + + KFL + + G+RLSDH PI+ D+ + Sbjct: 270 NCEVVDKILFRGS--KFLKLNAVRYRNERAAFLDEAGERLSDHDPIAADFTW 319 >gi|326317822|ref|YP_004235494.1| exodeoxyribonuclease III Xth [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374658|gb|ADX46927.1| exodeoxyribonuclease III Xth [Acidovorax avenae subsp. avenae ATCC 19860] Length = 302 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 73/302 (24%), Gaps = 70/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N + L Q+ + + LQE+ + Sbjct: 1 MKIATFNVN----------------SIRARLPALLQWLQETRPGVACLQELKCTDDA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + +A+ + ++ L G Sbjct: 42 -------FPAEEIRAAGYGALWHGQKAWNGVAILARGAEPIEVQRGLPGDAADTQSRYLE 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 AV+ ++ V ++L + + Y + L + Sbjct: 95 AAVDGVL--------VACLYLPNGNPAPGPKFDYKLA------WLGRLARRADVLRSRPE 140 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+AGDFN D ++ + + Sbjct: 141 PVVLAGDFNIIPTERDVYKPDAWVEDALFRTEVRDAFRALVDSGWTDALRAVHPGETVYT 200 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ +++ A + L D R SDH P Sbjct: 201 FWDYLRQRFQRNAGLRIDHLLLNPAAARRLQDAGV-------DRDVRGRARPSDHAPAWA 253 Query: 301 DY 302 Sbjct: 254 VL 255 >gi|153951075|ref|YP_001397480.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. doylei 269.97] gi|152938521|gb|ABS43262.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. doylei 269.97] Length = 259 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 82/304 (26%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + K D + QE+ A Sbjct: 8 MKLLSWNVNGLRSICDKNA---------------LDWIKKEKIDFIGFQEI---KAHEDK 49 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FPK + + + + ++ + +++ + F R Sbjct: 50 FPKKIYEYPFKHMYFNSAKRA-----GYSGVMSLCNFDSEVKK-------CEFFDDEEGR 97 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++E K I + +I+ + + N + ++ + + Sbjct: 98 -----VLEHRFKNIALFNIYFPNGQKDEERLNFKMKFYTDFLV-------YLNKLLKDGF 145 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GD N L + + + F + Sbjct: 146 EIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFVDTFREINGEIKEKY 205 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + L + ++ SDH P+ Sbjct: 206 SWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFIRDDIF-----------GSDHAPVG 254 Query: 300 IDYD 303 I+ D Sbjct: 255 IEID 258 >gi|16758784|ref|NP_446359.1| deoxyribonuclease gamma precursor [Rattus norvegicus] gi|6647472|sp|O89107|DNSL3_RAT RecName: Full=Deoxyribonuclease gamma; Short=DNase gamma; AltName: Full=DNaseY; AltName: Full=Deoxyribonuclease I-like 3; Short=DNase I-like 3; Flags: Precursor gi|3220025|gb|AAC40134.1| DNase gamma [Rattus norvegicus] gi|3395772|gb|AAC28937.1| DNAseY [Rattus norvegicus] gi|56789880|gb|AAH88122.1| Deoxyribonuclease 1-like 3 [Rattus norvegicus] gi|149040086|gb|EDL94170.1| deoxyribonuclease I-like 3 [Rattus norvegicus] Length = 310 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 102/308 (33%), Gaps = 40/308 (12%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 Y+ +L+ F++ +++ +RL S+N+ + E S K + ++ + K Sbjct: 9 YLASLLLFILALHGALS--LRLCSFNVRSFGE---------SKKENHNAMDIIVKIIKRC 57 Query: 65 DADIVFLQEMGSYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 D++ L E+ N + + N+ + + R++ + + A ++K Sbjct: 58 --DLILLMEIKDSNNNICPMLMEKLNGNSRRSTTYNYVISSRLGRNTYKEQY-AFLYKEK 114 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENT 176 V V + Y +D + +R + + K ++ +H + ++ Sbjct: 115 LVSVKAK-YLYHDYQDGDTDVFSREPFVVWFQAPFTAAKDFVIVPLHTTPETSVKEIDEL 173 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + + F+ GDFN +Y+ + + + + Sbjct: 174 ADVYTDVRRRW-------------KAENFIFMGDFNAGCSYVPKKAWKNIRLRTDPNFVW 220 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SD 294 +++ I + Q ++ S + + S + L SD Sbjct: 221 LIGDQEDTTVKKSTSCAYDRI--VLRGQEIVNSVVPRSSGVFDFQKAYELSEEEALDVSD 278 Query: 295 HCPISIDY 302 H P+ Sbjct: 279 HFPVEFKL 286 >gi|313498769|gb|ADR60135.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida BIRD-1] Length = 257 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 35/286 (12%), Positives = 80/286 (27%), Gaps = 56/286 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----GSYNA 79 + +++ N++ LR+ + AD+VFLQE+ + Sbjct: 21 LNVLTLNVHKGFTFFNRRF----------ILPELREAVRATGADLVFLQEVHGSHQQHAL 70 Query: 80 VAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +P+ F + + + A+ K + + + Sbjct: 71 RHPAWPETPQYEFLADSMWPQFAYGRNAVYPHGDHGNALLSKFPISRFNNLDVSVQGN-- 128 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R + +E+ G V + + + +Q + + D + Sbjct: 129 ---EQRGLLHCQLEVPGHD-QVHAVCVHLGLR-----------EAHRQRQVKLMLDLLAS 173 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 P +IAGDFN W+ + + + + + Sbjct: 174 -LPPNAPVIIAGDFND-----------WRLKADAVLSEHLTEVFGTPARSFPARLPLLRL 221 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + + + + K LSDH P++ + + Sbjct: 222 DRIYLRNA-----VPGAAQVLS------KYPWSHLSDHVPLAAEIN 256 >gi|300691813|ref|YP_003752808.1| hypothetical protein RPSI07_2169 [Ralstonia solanacearum PSI07] gi|299078873|emb|CBJ51534.1| conserved protein of unknown function, endonuclease/exonuclease/phosphatase family [Ralstonia solanacearum PSI07] Length = 289 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 83/304 (27%), Gaps = 50/304 (16%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAKVF 84 +++WNI +G D + A+ + D++ LQE+ S Sbjct: 5 ILTWNIQWGRGVDG-----------RVDLPRMLAEARAMGPFDVLCLQEVTSGFGNLPGQ 53 Query: 85 PKNTWCIFYST--------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 P + + I + + A+ + + + L D+ Sbjct: 54 PGDDQWHELARALGQEFTLIDGIALERHEGARIQRFGNAIATRLPVLHVARHALPCPVDT 113 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A+E V+ + V+ HL+ + + ++ + Sbjct: 114 SP-TMPRMAIEATVQAPFGPLRVVSTHLEYYSETQRIAQIDVLRALHVAGCMRTAHPPTL 172 Query: 197 QKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + + PF VI GDFN K N +L + Sbjct: 173 GPEPADGPFRPLAQTHASVICGDFNCKRNSTPKRLATVPFSHETVALYDAWEIAHGPAPQ 232 Query: 248 NKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 D+ ++ + + + + + SDH P+ Sbjct: 233 PPTFGVHDRTGWTEPAYACDFMLVSEPLKTRVARVEVN-----------SATQASDHQPM 281 Query: 299 SIDY 302 ++ Sbjct: 282 LLEL 285 >gi|260910486|ref|ZP_05917155.1| AP endonuclease domain protein [Prevotella sp. oral taxon 472 str. F0295] gi|260635432|gb|EEX53453.1| AP endonuclease domain protein [Prevotella sp. oral taxon 472 str. F0295] Length = 362 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 74/303 (24%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++S+N +L + T + + Y K DADI+ LQE Sbjct: 101 FKVLSYN----------TLMWGGGEATEAQRWEMLNYVKAKDADILCLQEANLGGKFQNT 150 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 I+ + I+ +A+ K + Q + D Sbjct: 151 IDSLLNSIY-------PYHDIKEKTTIYDRLAIYSKYPILRSQRVMYPQSAD-------- 195 Query: 144 RAVELLVEINGKKIWVLDIHL------------------------KSFCFLDSLENTYSP 179 + V + V++ H + SL + Sbjct: 196 FSQACWVATPDDTVLVINNHFATTGLTEAQRQNFKNMLKGDLRTKQMPGLGKSLIHKLGE 255 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + + Q + ++ + ++ GDFN + + + Sbjct: 256 YAQVRAPQVDAVARFVRKH--KGHSVILCGDFNDSPISYARHRM------AKELTDCYVA 307 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + + ID + + SDH PI Sbjct: 308 SGNGPGISYHRNAFYVRIDNIMCSDDWQPLKCVVENKVKT-------------SDHYPIF 354 Query: 300 IDY 302 Sbjct: 355 CQL 357 >gi|228995734|ref|ZP_04155396.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17] gi|228764016|gb|EEM12901.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17] Length = 263 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 76/269 (28%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF-----------YSTERLIN 100 L + + D++ LQE+ V F S I Sbjct: 18 EKIRHLAKTIQEEGYDVIALQEVSQSIKAQNVCGNKKKDNFGLVLLAELEKLGSGNYNIV 77 Query: 101 HSKRDSNNDIH-TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 DI+ A+ K+ V Q S+ + +KD+ R+ V V GK + Sbjct: 78 WDYSHIGYDIYEEGSAIITKHPIVKQDSFFVSESKDTSYWKA-RKIVSATVSYKGKNMTF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + ++ GDFN G Sbjct: 137 YSCHLGW----------WNDEEETFQGQVDCLTQHVN----EKELSILMGDFNNNARLQG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 D+ D+ K+ + K ID + ++ + Sbjct: 183 EGYDYLMQKGLYDTYELAFKKDEGTTVQGKIAGWDENKQNLRIDLILSNKPKTVISSKVI 242 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ I N +SDH + + D Sbjct: 243 FNGINRNI---------ISDHFGVEVQLD 262 >gi|289829520|ref|ZP_06547122.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 228 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 25/233 (10%), Positives = 58/233 (24%), Gaps = 47/233 (20%) Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 ++ H +A+ K + + RR + + I V Sbjct: 11 GYNVFYHGQKGHYGVALLTKATPISVRR-----GFPDDGEEAQRRIIMAEIPSPLGNITV 65 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY-- 217 ++ F + +Q Q L++++ + + P +I GD N Sbjct: 66 IN-----GYFPQGESRDHPLKFPAKAQFYQNLQNYLETELKCDNPVLIMGDMNISPTDLD 120 Query: 218 -------------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI--- 255 L ++ + + F + + + Sbjct: 121 IGIGEENRKRWLRTGKCSFLPEEREWMSRLLKWGLVDTFRQANPQTMDKFSWFDYRSKGF 180 Query: 256 ------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID + + + D ++ SDH P+ + Sbjct: 181 VDNRGLRIDLLLASAPLAERCAETGI-------DYDIRSMEKPSDHAPVWATF 226 >gi|83593698|ref|YP_427450.1| endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC 11170] gi|83576612|gb|ABC23163.1| Endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC 11170] Length = 255 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 32/276 (11%), Positives = 77/276 (27%), Gaps = 55/276 (19%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + ++NI++ +G + Q + LDAD++ LQE+ A+ Sbjct: 19 IATYNIHSCLGTDGAFRPD-----------RVAQAIRALDADVIGLQEV--GWALRGPSG 65 Query: 86 KNTWCIFY-STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + + T + + + H A+ ++ L S R Sbjct: 66 FDQFAFLERETGYTVIPGLVRHHANAHFGNAILSRHPVESVAPLDLSLPYHS-----PRG 120 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ + + G+ + ++++HL + + L W P Sbjct: 121 GIDARIRVKGRSVRLINVHL--------GLIPLERRIQIRRIGLRLLDGW-------RGP 165 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 ++ GD N + + + + D + Sbjct: 166 ALVCGDLNHWRRTSPAMQRLHRLL-----------PGGVTGQTYPSALPTMMFDRILATG 214 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + ++ + SDH P+ Sbjct: 215 DL----------HLENHQVIRTEGTRVASDHLPLMA 240 >gi|304314422|ref|YP_003849569.1| DNA lyase [Methanothermobacter marburgensis str. Marburg] gi|302587881|gb|ADL58256.1| predicted DNA lyase [Methanothermobacter marburgensis str. Marburg] Length = 257 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 85/306 (27%), Gaps = 77/306 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80 +++++SWN+N L + + DI+ LQE Sbjct: 3 EIKIISWNVNGLRAVYRKGF---------------LDWFMDEKPDILCLQETKASPEQLP 47 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++ + F++ + + +A+ + + + D R Sbjct: 48 RRLRHVEGYRSFFTPAERKGY----------SGVAMYTRIPPKSIREGFGVERFDIEGRI 97 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + + +I+ + D + + + ++++ Sbjct: 98 QV---------ADFDDFLLYNIYFPNGKMSDER-------LKYKLEFYDAFLEDVNRERD 141 Query: 201 SLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSR 244 + VI GDFN + K I+ +S Sbjct: 142 AGRNTVICGDFNTAHREIDLARPKENSNVSGFLPVERAWIDKFIENGYVDTFRMFNNESG 201 Query: 245 CNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + R + +DYF +++ K + + + SDHCP Sbjct: 202 QYTWWSYRTRARERNVGWRLDYFFVNEEFAKNVKRSWILSEV-----------MGSDHCP 250 Query: 298 ISIDYD 303 + ++ + Sbjct: 251 VGLEIE 256 >gi|294777627|ref|ZP_06743078.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus PC510] gi|319640218|ref|ZP_07994944.1| hypothetical protein HMPREF9011_00541 [Bacteroides sp. 3_1_40A] gi|294448695|gb|EFG17244.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus PC510] gi|317388205|gb|EFV69058.1| hypothetical protein HMPREF9011_00541 [Bacteroides sp. 3_1_40A] Length = 359 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 41/336 (12%), Positives = 88/336 (26%), Gaps = 85/336 (25%) Query: 3 RKYVLALVFFLVPCTASV---------------AQKVRLVSWNINTLSEQEGVSLWKNSV 47 RKY L L F + C+ ++ +S+N + + + Sbjct: 66 RKYAL-LSFLGLVCSIGAIRTYFPVNVFVSDVPEGAIKFLSYNTMAFEKNRANTKDNPNP 124 Query: 48 KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107 + +Y +N +ADI+ LQE + K Sbjct: 125 ---------VLEYLRNSNADIICLQE--------YIVGGRLTKKEVDYALRDYPYKNYHK 167 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 + + + + ++ +++NG + V++ HL+S Sbjct: 168 ISGANGLGCYSRFPILSAHPVKYASLNN--------GSIAYKIKVNGDTLLVVNNHLESN 219 Query: 168 CFLDSLENTYS-----------------------PSCSLLSQQAQWLKDWITQKKESLVP 204 + + Y + ++ + QA + + K Sbjct: 220 KLTEKDKEVYREMMKDPDKQKVSQGSRLLIRKLAEASAIRAVQADSIARLVAGYKGGG-- 277 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 ++ GDFN + + ++ N ID ++ + Sbjct: 278 IIVCGDFNDSPISYT-HRVVGEGLNDAFVESGNGFGISYNQNHFYF-----RIDNILLSK 331 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 N + + SDH PI Sbjct: 332 NLKSYRCTV-------------DNTIKSSDHYPIWC 354 >gi|188590962|ref|YP_001795562.1| exodeoxyribonuclease iii/endonuclease/phosphatase [Cupriavidus taiwanensis LMG 19424] gi|170937856|emb|CAP62840.1| putative EXODEOXYRIBONUCLEASE III/endonuclease/phosphatase [Cupriavidus taiwanensis LMG 19424] Length = 258 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 82/307 (26%), Gaps = 78/307 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VA 81 +R++S N+N + + + DAD+V +QE+ + A Sbjct: 2 LRIISANLNGIRSASKKGFF---------------DWMGKQDADMVCVQELKAQAADMTE 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + F+ +S + P + Sbjct: 47 AFLAPHGYHGFFHYAEKKGYSGVGLYT-----------------RHKPERVITGFGNAEF 89 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + V+ + V+ +++ S + + LK S Sbjct: 90 DNEGRYVEVQYP--HLAVISVYVPSGSSGEERQLAKFRFLEAFLPHLLQLKA-------S 140 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKT---------------IDPNDSLIRFPKEKDSRCN 246 V+ GD N + + + + ++ D R + Sbjct: 141 GREIVLCGDVNIAHKEIDIKNWKGNLKNSGFLPEERAWIGELFDVHGYVDVFRKLDPRPD 200 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + S + ++ SDH P Sbjct: 201 QYTWWSNRGQAYAKNVGWRIDYHLATPKIADTAQLCSI-----------YKDEKFSDHAP 249 Query: 298 ISIDYDF 304 +SIDY+F Sbjct: 250 LSIDYNF 256 >gi|294629849|ref|ZP_06708409.1| exodeoxyribonuclease III [Streptomyces sp. e14] gi|292833182|gb|EFF91531.1| exodeoxyribonuclease III [Streptomyces sp. e14] Length = 267 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 32/309 (10%), Positives = 78/309 (25%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 + + S N+N L ++ AD++ LQE+ Sbjct: 2 LTVTSVNVNGLRAAAKKGF---------------VEWLARTGADVLCLQEVRAEPQQLPE 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +V W + ++ + +++ + + D R Sbjct: 47 QVRAPEGWHVTHAP----------AAAKGRAGVSLYTRREPDRVRVGFGSTEFDGSGR-- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++ G + V ++L S ++ + L++ Sbjct: 95 -----YVEADLPG--VTVASLYLPSGEVGTERQDEKVRFMGEFLAYLKELRERA---AAD 144 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTI--DPNDSLIRFPKEKDS 243 ++ GD+N + + + + + Sbjct: 145 GREVLVCGDWNIAHQRADLKNWRGNLKNSGFLPEEREWLTQVLTPEAGGYVDVVRALHPD 204 Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + IDY V ++ + + +R SD Sbjct: 205 VEGPYSWWSYRGRAFDNDTGWRIDYHVSTPGLAAKAVKGFV-------ERAATHAERWSD 257 Query: 295 HCPISIDYD 303 H P+++ YD Sbjct: 258 HAPVTVVYD 266 >gi|291568366|dbj|BAI90638.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 497 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 88/304 (28%), Gaps = 31/304 (10%) Query: 22 QKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 V++ ++N+ L + + + T + + + + ADI+ QE+ A Sbjct: 170 NSVKIGTFNLYNLVLPNLTYYETRQYTPELYQQKKTWVSRQLETMQADIIGFQEIFHPEA 229 Query: 80 VAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + ++ + + K I + + +S + Sbjct: 230 LQEILAATPFYDHAHLITTNPRGDKPVVGLCSKLPIISWQIYDKFPPESQIDIEGTIIPI 289 Query: 139 RAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYS----------PSCSLLSQQ 187 +R + + +++ + V +HLKS S + + Sbjct: 290 NHFSRPVLAVNIQLQDHLQCTVFVVHLKSQRPKIPEGVDSQDPVEKAKGKVRSLLRRAAE 349 Query: 188 AQWLKD-WITQKKESLVPFVIAGDFNRK---------INYLGNNDDFWKTIDPNDSLIRF 237 A L+ + S P ++ GDFN + +K D L + Sbjct: 350 ATALRYIMLKTWSHSQNPIILLGDFNDSDLAITTKIMAGDISWKKTRFKPNHNQDELRLY 409 Query: 238 PKEKDSRCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + ++ +D+ ++ Q ++ + + Sbjct: 410 SVKDIQVRQSYRDCYYTYMYNGYYETLDHILVSQELVVENSRQVGRVSYVALFNDHLVDQ 469 Query: 291 RLSD 294 LSD Sbjct: 470 SLSD 473 >gi|254511339|ref|ZP_05123406.1| exodeoxyribonuclease III [Rhodobacteraceae bacterium KLH11] gi|221535050|gb|EEE38038.1| exodeoxyribonuclease III [Rhodobacteraceae bacterium KLH11] Length = 262 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 28/308 (9%), Positives = 72/308 (23%), Gaps = 75/308 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAV 80 L +WNIN ++ + + D++ LQE S Sbjct: 2 PFTLATWNIN----------------SVRLREPIVLKLLQEEAPDVLCLQECKSPVEKIP 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + F + + + +A+ + G + Sbjct: 46 TEGFAELGYTHMI-----------ARGQKGYNGVAILSRLPMEEVGDKDFAGLGHARH-- 92 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + +E + + + ++ + D + + ++DW +K Sbjct: 93 -----IAGRLENG---VTIHNFYVPAG--GDVPDREVNEKFGQKLDYLTDMRDWFHAEKP 142 Query: 201 SLVPFVIAGDFNRKINYLG--NNDDFWKTID-------------PNDSLIRFPKEKDSRC 245 ++ GD N ++ K + + ++ Sbjct: 143 GKS--ILVGDLNIAPREDDVWSHKQLLKVVSHTPIEVEHLAETQDAGGWVDITRQDIPEG 200 Query: 246 NANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ + ++ SDH Sbjct: 201 QLYSWWSYRARDWDAADKGRRLDHVWATSDISNAGHSS-------RILRDARGWEKPSDH 253 Query: 296 CPISIDYD 303 P+ +D Sbjct: 254 APVFATFD 261 >gi|193215004|ref|YP_001996203.1| exodeoxyribonuclease III Xth [Chloroherpeton thalassium ATCC 35110] gi|193088481|gb|ACF13756.1| exodeoxyribonuclease III Xth [Chloroherpeton thalassium ATCC 35110] Length = 281 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 72/305 (23%), Gaps = 73/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +WNIN + L + + DI+FLQE+ A + Sbjct: 24 FTVSTWNING----------------IRARKDSLVDWLASNKPDILFLQEIK-----ADI 62 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + T I V+K L + D+ +R Sbjct: 63 AKIPPVFSELPDYDAFWNDSTFKGGYSGTGILVKKSLKESLGNPIFSIPEFDAENRI--- 119 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 VE K+ ++ I+ D L Q + L ++ Sbjct: 120 ------VEAAFKQTVLIGIYTPRGEKDDHY--------ELKLQMLEQLTLRAQGLMQNGA 165 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GDFN + + + Sbjct: 166 DVLICGDFNVAHTEKDVHSSQNKPNATGLRPKERAAIDRLLSAGLIDITRALYPDNSELF 225 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ID F + + ++ SDH P++ Sbjct: 226 TWWPYWKGAREKNLGWRIDCFYVSPQLATRTRKVEV-----------DTEEKSSDHSPVT 274 Query: 300 IDYDF 304 + DF Sbjct: 275 LVLDF 279 >gi|120586985|ref|NP_001073361.1| hypothetical protein LOC317628 [Rattus norvegicus] gi|119850781|gb|AAI27531.1| Similar to apurinic/apyrimidinic endonuclease 2 [Rattus norvegicus] gi|149031345|gb|EDL86343.1| rCG38932, isoform CRA_a [Rattus norvegicus] Length = 516 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 80/331 (24%), Gaps = 72/331 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--- 80 +R+VSWNIN + + T LR+ LDADIV LQE V Sbjct: 2 LRVVSWNINGIRSPLQGLAGQEPSNS----PTALRRVLDELDADIVCLQETKVTRDVLTE 57 Query: 81 -AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDS 136 + +S R D T +A L G D Sbjct: 58 PLAIVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYGNTDE 117 Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLL 184 F++ R +E K + +++++ LL Sbjct: 118 FTQEELRVLDSEGRAFLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLL 177 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230 +A+ L + +I GD N + Sbjct: 178 QIRAEALLA-------AGSHVIILGDLNTAHRPIDHCDASSLECFEEDPGRKWMDGLLSN 230 Query: 231 NDSLIRFPKEKDSRCNANKNL------------------RNKIPIDYFVMDQNAYKFLIQ 272 + + +DY + D++ Sbjct: 231 PGNEAGPHIGHFMDSFRYFHPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRSL------ 284 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 I + SDHCP+ + Sbjct: 285 ----VIDTFQASFLLPEVMGSDHCPVGAVLN 311 >gi|34500277|gb|AAQ73759.1| deoxyribonuclease I-like 2 short form [Homo sapiens] gi|34500279|gb|AAQ73760.1| deoxyribonuclease I-like 2 short form [Homo sapiens] gi|119605934|gb|EAW85528.1| deoxyribonuclease I-like 2, isoform CRA_b [Homo sapiens] Length = 278 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 36/284 (12%), Positives = 80/284 (28%), Gaps = 32/284 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NI + + + S+ + + D+ +QE+ + A Sbjct: 22 LRIGAFNIQSFGDSKVSDPACGSI---------IAKILAGY--DLALVQEVRDPDLSAVS 70 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 E S+ + + V L + +R Sbjct: 71 ALMEQINSVSEHEYSFVSSQPLGRDQYKEMYLFVYRKDAVSVVDTYLYPDPE---DVFSR 127 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + G ++ I L + + + +L + W Sbjct: 128 EPFVVKFSAPGTAQNLVLIPLHA-----APHQAVAEIDALYDVYLDVIDKW------GTD 176 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM- 262 + GDFN +Y+ D + ++ + N + D V Sbjct: 177 DMLFLGDFNADCSYVRAQDWAAIRLRSSEVFKWLIPDSADTTVGNSDCAY----DRIVAC 232 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYDF 304 + L +S + + E+ + + L SDH P+ + F Sbjct: 233 GARLRRSLKPQSATVHDFQEEFGLDQTQALAISDHFPVEVTLKF 276 >gi|302334904|ref|YP_003800111.1| exodeoxyribonuclease III Xth [Olsenella uli DSM 7084] gi|301318744|gb|ADK67231.1| exodeoxyribonuclease III Xth [Olsenella uli DSM 7084] Length = 263 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 80/310 (25%), Gaps = 76/310 (24%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 T + + ++LVSWN+N L Q LDAD+ +QE Sbjct: 4 TVAPDRALKLVSWNVNGLRA-------------VMRKDPSFLQIFSQLDADVFAIQETK- 49 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + + ++ T + ++ AV + + D Sbjct: 50 ---LQEGQVELDLPGYFQTWN-------FAERKGYSGTAVFSREDPLRVIRQIGSDVADD 99 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R + + W +D++ + + L Sbjct: 100 EGR---------VCALEFPTFWFVDVYTPNSKQGLARIEERMGWDERFRLFLLEL----- 145 Query: 197 QKKESLVPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEK 241 ++ P V GDFN + D + + F Sbjct: 146 ---DAHKPIVTCGDFNVAHQEIDLRNPSTNHENPGFSDAERDSFGRLLDAGFTDTFRSLN 202 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 A + IDYF+ + + S + ++ Sbjct: 203 PDLEGAYSWWSYRMRARERNVGWRIDYFLTSERVADRIEGASIHDEVF-----------G 251 Query: 293 SDHCPISIDY 302 SDHCPI + Sbjct: 252 SDHCPIELQI 261 >gi|227874670|ref|ZP_03992832.1| possible exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35243] gi|269976389|ref|ZP_06183379.1| exodeoxyribonuclease III [Mobiluncus mulieris 28-1] gi|227844743|gb|EEJ54890.1| possible exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35243] gi|269935410|gb|EEZ91954.1| exodeoxyribonuclease III [Mobiluncus mulieris 28-1] Length = 294 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 36/283 (12%), Positives = 74/283 (26%), Gaps = 48/283 (16%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + +N D+D++ LQE+ + + W + R+ + + Sbjct: 21 DWLENDDSDLLCLQEVRATPQDTQDLFGPAWDVHVWPCRVKGRAGVALGARRDSD----W 76 Query: 119 KNVRVLQQSYPLLGAK--DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + ++ + P L A+ R + E G ++ +L S + Sbjct: 77 EIGQLTEGLPPDLYAEVGGEPDVDSGRWLEAAIHEPQGTTFTLVSAYLHSGELRTEKQEQ 136 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNND------------ 222 + ++ Q L S P +I GDFN + Sbjct: 137 KIAFLHRVGERVQQLSARAMAGAGSDTPQEALICGDFNIVRTARDIKNWKPNHNKTSGVM 196 Query: 223 ---------DFWKTIDPNDSLIRFPKE---KDSRCNANKNLRNK---------IPIDYFV 261 T+ + L + +DY + Sbjct: 197 DEEIAFLDAWMADTLSGSKRLPCVDVGRALAGDTDGPYTWWSWRGKAYDNNAGWRLDYHM 256 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + R +DH P+++ YDF Sbjct: 257 ATPGLAGQAQSAAV-------YRAPAYDARFTDHAPVTVAYDF 292 >gi|154274602|ref|XP_001538152.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150414592|gb|EDN09954.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 330 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 85/303 (28%), Gaps = 28/303 (9%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +RL+++N+ ++ G K +R + T + D V +QE+ Sbjct: 36 PFPNKSLSLRLMTFNVRYAAKPSGN--EKAWSERRGNLITQVAYEMGATDNVFVGMQEVL 93 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSN--NDIHTAIAVRKKNVRVLQQSYPL--- 130 V N + RD + ++ I RK +++ Sbjct: 94 HNQLEDIVKGLNNHPSSGGDDWAYIGVGRDDGKQSGEYSPILYRKSLWELVEMDTKWLSE 153 Query: 131 -LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 A NRR V + V N + + + ++ Sbjct: 154 TPDVPSYGWGATNRRIVTIGVFRNKRTRAMALVMNTHL---------DHQVSEARLHGSE 204 Query: 190 WLKDWITQKKESLVP------FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + I K ++ GDFN + + + K Sbjct: 205 LILKLIGDYKNKRQYKCKLTGVILTGDFNSEEGQEAYKVITESKVLVDPVKKFGDKNIYG 264 Query: 244 RCNANKNLRN---KIPIDYFVMD-QNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPI 298 + IDY + N ++ + +++ Y + G SDH + Sbjct: 265 NRKTFTGFDSEVGLTRIDYVFVGQGNLCRWGDKGTWNVNRYAVLPNKFDDGIFFSDHRAV 324 Query: 299 SID 301 D Sbjct: 325 VAD 327 >gi|33591597|ref|NP_879241.1| putative endonuclease [Bordetella pertussis Tohama I] gi|33571240|emb|CAE44701.1| putative endonuclease [Bordetella pertussis Tohama I] gi|332380997|gb|AEE65844.1| putative endonuclease [Bordetella pertussis CS] Length = 262 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 92/306 (30%), Gaps = 74/306 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ S N+N + + L+ + +AD++ LQE + + Sbjct: 2 LRITSLNLNGIRS---------------AFRKGLQPWMTAHNADVLCLQEIKVSHDDLTD 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + + +S + +R RV+ G A Sbjct: 47 ELRHPPGYTGHFHHAEKKGYSG--------VGMYLRAGAERVVA------GFDCEEFDAE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + K + V+ +L S D + T L + + +++ Sbjct: 93 GRI-----LRADWKDLSVISAYLPSGSSGDERQQTKYRFLDQFGPWLDGL---MAEHRKT 144 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 FVI GD+N L + + + ++ D R + Sbjct: 145 GREFVICGDWNIAHKEIDLKNWKGNQKNSGFLPEERAWLTEVFDRRGFVDVFRKLDERAD 204 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + + S + +R SDH P Sbjct: 205 QYTWWSNRGQAWAKNVGWRIDYQIATPGIAERARATSI-----------YKDERFSDHAP 253 Query: 298 ISIDYD 303 +++DYD Sbjct: 254 LTVDYD 259 >gi|254445623|ref|ZP_05059099.1| exodeoxyribonuclease III [Verrucomicrobiae bacterium DG1235] gi|198259931|gb|EDY84239.1| exodeoxyribonuclease III [Verrucomicrobiae bacterium DG1235] Length = 251 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 75/303 (24%), Gaps = 77/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VSWN+N + + DAD + LQE + + K Sbjct: 1 MKFVSWNVNGIRAIMKKGAM---------------DFFDGCDADFICLQETKATADIVKD 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + E ++ A+ + + D R Sbjct: 46 FDWGVSKTVLANEAEK---------KGYSGTAIIARTEPESVSYGIGIEKHDGEGR---- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + +++ ++ + + L+ Sbjct: 93 -----VVTAEYPEFFIVTVYTPNAQNELRRLPYRQEWDRDFLAYVKALEA--------TK 139 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + I + F + + + Sbjct: 140 PVIFCGDLNVAHTEDDLANPKTNRKNAGFTDEERAGFDDIVAAGFVDTFREFTQGKGH-Y 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ ++ L S + SDHCP+ Sbjct: 199 SWWSYRGGARSRNVGWRIDYFMISESLRPQLKSASILPEVL-----------GSDHCPVE 247 Query: 300 IDY 302 + + Sbjct: 248 MVF 250 >gi|197120879|ref|YP_002132830.1| exodeoxyribonuclease III Xth [Anaeromyxobacter sp. K] gi|196170728|gb|ACG71701.1| exodeoxyribonuclease III Xth [Anaeromyxobacter sp. K] Length = 265 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 33/303 (10%), Positives = 77/303 (25%), Gaps = 80/303 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N + + ++ D+V LQE+ + + Sbjct: 1 MKIGTWNVNG----------------IRAREAQVGEFIAREAPDVVCLQEIKAPPS---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S L + ++ +A+ + ++ + D +R Sbjct: 41 ------KVPPSLCELEGYWCLWHGETAYSGVALLVRKAIAPERPAFVHPPFDLETR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 E+ G + V I++ + + + + ++ + + S Sbjct: 91 ---IATCELGG--VTVASIYVPNGG----------KDLAAKLRFLEAMERFAADAQASGR 135 Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GD N L ++ I + + Sbjct: 136 RLVLCGDLNVARTDLDVHPKERKAGAIGQLPEERALFERILSRGLVDVGRALDPANEGLF 195 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDY S S SDH P+ Sbjct: 196 TWWAPWRNLRQRNIGWRIDYV-----------LASASLAASATRCRVLADFGTSDHAPVV 244 Query: 300 IDY 302 ++ Sbjct: 245 AEF 247 >gi|300767631|ref|ZP_07077541.1| exodeoxyribonuclease III [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494616|gb|EFK29774.1| exodeoxyribonuclease III [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 265 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 75/303 (24%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 V+L+SWN+N L LDAD +QE A Sbjct: 12 VKLISWNVNGLRAAVKHGF---------------VMTFNELDADFFCVQETK-LQAGQIE 55 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + ++ A+ K+ + + D R Sbjct: 56 LDFPGYYQYWN----------YAERKGYSGTAIFTKHEPLNVTYGIGVPEFDDEGR---- 101 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +VL + + + L + Sbjct: 102 -----VITLEYADYYVLTCYTPNSGGELKRLDYRQQWEDAFLTYINSL--------SANK 148 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + + + + F + + Sbjct: 149 PLIFCGDLNVAHENIDLKNWRSNHHSAGFTDEERTKFDRLLAAGYTDTFRHFYPDQTDIY 208 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ Q L+ ++ SDHCP+ Sbjct: 209 SWWSYRGHARDNNSGWRIDYFITSQQLDSQLLNARIHNEIF-----------GSDHCPVE 257 Query: 300 IDY 302 +D Sbjct: 258 LDI 260 >gi|300726843|ref|ZP_07060273.1| exodeoxyribonuclease III [Prevotella bryantii B14] gi|299775956|gb|EFI72536.1| exodeoxyribonuclease III [Prevotella bryantii B14] Length = 250 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 79/305 (25%), Gaps = 81/305 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + K+ DAD +QE Sbjct: 1 MKLISWNVNGLRACVTKGFK---------------ETFKSFDADFFCIQETKMQEG-QLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + F++ +S Sbjct: 45 LQFDGYESFWNYADKKGYSGTAIYAKT-----------------------------KPLN 75 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW--ITQKKES 201 + ++ + + V+ + +F + L+ + W KD+ K + Sbjct: 76 VTYGIDIDDHNHEGRVITLEYDNFFLVTVYTPNSQNELKRLNYRMIWEKDFQTYLHKLDK 135 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 P ++ GD N + + + + K + Sbjct: 136 RKPIIVCGDMNVAHQEIDIKNPKTNHKSAGFTDEEREKMTQLLSNGFTDTFRFKYPEQIT 195 Query: 246 NANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + R + IDYF++ + ++ SDHCP+ Sbjct: 196 YSWWSYRFRAREKNAGWRIDYFLVSDRIKEKVLDAKIHT-----------DIMGSDHCPV 244 Query: 299 SIDYD 303 + + Sbjct: 245 ELTIE 249 >gi|188991692|ref|YP_001903702.1| Exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. B100] gi|167733452|emb|CAP51653.1| Exodeoxyribonuclease III [Xanthomonas campestris pv. campestris] Length = 367 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 70/302 (23%), Gaps = 70/302 (23%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 + ++N+N ++ L Q+ + DIV LQE+ S Sbjct: 18 TIATYNVNGIAS----------------RLPHLLQWLQREQPDIVGLQELKSTQEA---- 57 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 R + +A+ + ++ L Sbjct: 58 ------FPEQAIRDAGYGVIWQGQRSWNGVALLARGAEPVEIRRGLPWDPADTQSRYLEA 111 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 A+ ++ V ++L + + Y + Q L P Sbjct: 112 AIHGVI--------VGCLYLPNGNPQPGPKFDYK------LKWFQRLLRHAATLVALPHP 157 Query: 205 FVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + GDFN + + + Sbjct: 158 VALIGDFNVVPTDAHIYDPKGWRKDALLQPESRAAYAQLLAQGWTDSLQAIHGDAPVYTF 217 Query: 250 NLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + ID+ ++++ L D ++ SDH P I Sbjct: 218 WDYFRQHFARDRGLRIDHLLLNRTLAAGLRDAGV-------DKWVRALEKASDHAPTWIT 270 Query: 302 YD 303 D Sbjct: 271 VD 272 >gi|293339926|ref|XP_002724704.1| PREDICTED: rCG35247-like isoform 3 [Rattus norvegicus] gi|293351345|ref|XP_002727798.1| PREDICTED: rCG35247-like isoform 3 [Rattus norvegicus] Length = 363 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 42/300 (14%), Positives = 91/300 (30%), Gaps = 38/300 (12%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78 A +R+ ++N+ + + + SV + Q DI +QE+ + Sbjct: 81 ATALRIGAFNVQSFGDHKASDPDCGSV---------IAQILAGY--DIALVQEVRDPDLS 129 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 AV+ + + + + + RK V V +Y +D Sbjct: 130 AVSLLMEQINSVSKHEYGFVSSKPLGRDQYKEMYLFVYRKDVVSV-VSTYQYPDPED--- 185 Query: 139 RAGNRRAVELLVEING-----------KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 A +R + G ++ + S + + + + + Sbjct: 186 -AFSREPFVVKFSAPGCGELIPPPPPSYRLSLTLTSPLSTAAKELVLIPLHAAPNQAVAE 244 Query: 188 AQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 L D + + + GDFN Y+ +D + + + Sbjct: 245 IDALYDVYLDVIDKWNTDDMLFLGDFNADCKYVKAHDWPSIRLRSSQVFKWLIPDSADTT 304 Query: 246 NANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 N + D V+ K + +S S + E+ + + L SDH P+ + + Sbjct: 305 VGNSDCAY----DRIVVSGAHMRKSVKPQSASVHNFQEEFDLDQTQALAISDHFPVEVTF 360 >gi|254447779|ref|ZP_05061244.1| endonuclease/exonuclease/phosphatase family protein [gamma proteobacterium HTCC5015] gi|198262559|gb|EDY86839.1| endonuclease/exonuclease/phosphatase family protein [gamma proteobacterium HTCC5015] Length = 246 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 93/288 (32%), Gaps = 51/288 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+++N++ L +R+ + +ADIV LQE+ + + Sbjct: 1 MKLITYNMHKGFGVGNRRLV----------LHDMREALRAANADIVCLQELQGEHHHHRN 50 Query: 84 ----FPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +P+ F + + K H A+ + ++ + +++ Sbjct: 51 NHRHWPEEEQLEFLADSLWPHTAYGKNAVYQHGHHGNAILSRQPFSDWENINVSHRENA- 109 Query: 138 SRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 +R + ++E N G+++ ++ +HL F + L D I Sbjct: 110 ----SRSLLHGVIESNDGQRLHIICVHLGLFERERRRQIRQ-------------LSDRIE 152 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 +IAGDFN + + + K + K Sbjct: 153 SHVPHHEALLIAGDFNDWRQRCDRY---LRQHSEVEEVFEAHLGKVAPSFPAWYPLLK-- 207 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +D + + + LSDH P+S+++D+ Sbjct: 208 VDRVYARG-----------VSVNAVKRLTGQPWRGLSDHIPLSVEFDW 244 >gi|187779536|ref|ZP_02996009.1| hypothetical protein CLOSPO_03132 [Clostridium sporogenes ATCC 15579] gi|187773161|gb|EDU36963.1| hypothetical protein CLOSPO_03132 [Clostridium sporogenes ATCC 15579] Length = 352 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 42/321 (13%), Positives = 99/321 (30%), Gaps = 64/321 (19%) Query: 22 QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + ++NI G +S ++T + + + K + +FLQE Sbjct: 53 DSFSIATFNIGYAGMDDEQDFFMDGGKGSRSSSKEKTMENMKEITAFLKKDHSSFIFLQE 112 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV---------- 123 + + + + F N + + + + S + + V K + V Sbjct: 113 VDTNS--TRSFRINQYDYLKNNLKAYSSSMALNYKTPWVPVPVLKPHGTVNAGLVNLSKY 170 Query: 124 -----LQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTY 177 + YP +R +E + + N K++ +++ HL ++ Sbjct: 171 KVNSATRYQYPGKEGWPRQLAELDRCFLESRISLENDKELVLINSHLSAYDKGG------ 224 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---------NDDFWKTI 228 + QQ +L+++I ++ + ++ GD+N I D K Sbjct: 225 ----KIRKQQLSFLRNYIIKEYKKGNYIIVGGDWNHLIPGTDPLIFKTTEKWPDWLQKIP 280 Query: 229 DPNDS--LIRFPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + + + ID F++ N +I + + Sbjct: 281 NDFKPKEFKWVADKNVPTTRTDATPYKKGENFTAVIDGFLVSDNI--EVISVKAHSMDFK 338 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 DH P+++ + Sbjct: 339 NT----------DHNPVNMKF 349 >gi|315505929|ref|YP_004084816.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. L5] gi|315412548|gb|ADU10665.1| Endonuclease/exonuclease/phosphatase [Micromonospora sp. L5] Length = 259 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 37/308 (12%), Positives = 82/308 (26%), Gaps = 79/308 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78 +RL ++N+ + + L +LDAD++ LQE+ Sbjct: 1 MRLATFNLLHGRSLTDGLVDPD----------RLTAAVTDLDADVLALQEVDRDQTRSGK 50 Query: 79 -----AVAKVFPKNTWCIFYSTERLINHSKR------DSNNDIHTAIAVRKKNVRVLQQS 127 A+ + + R D + + I + ++ Q Sbjct: 51 LDLTAVAARALHADHHRFAAAVVGTPGEQFRPLTHDDDGHGEPLYGIGLISRHPVRSWQV 110 Query: 128 Y-------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 P G R R + +++ + V HL + Sbjct: 111 TRLRAAPVRSPIYAPGPGGGLVLLRDEPRVVLAAVLDTPHGPLTVAATHLSFVPGWN--- 167 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 L+ + + P ++ GD N + + Sbjct: 168 -------------IWQLRRVVRVLRTLPAPRILLGDLN---------------LPAGPAA 199 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + +R + ++ +D+ + D++ L + +SD Sbjct: 200 ALTRWQPLARRPTYPAGQPRVQLDHILADRHGLDRLPAVTAVHTPLAT---------ISD 250 Query: 295 HCPISIDY 302 H P+ +D Sbjct: 251 HRPLVVDL 258 >gi|239947787|ref|ZP_04699540.1| exodeoxyribonuclease III [Rickettsia endosymbiont of Ixodes scapularis] gi|239922063|gb|EER22087.1| exodeoxyribonuclease III [Rickettsia endosymbiont of Ixodes scapularis] Length = 279 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 81/307 (26%), Gaps = 72/307 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V+WNIN+L LLR+ A DI+ LQE +++ Sbjct: 16 MKIVTWNINSL----------------HLRIDLLRKLAHEHQPDIILLQETKVADSL--- 56 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ K S L + R Sbjct: 57 ------FPLEVIKNIGYEHVIYAGQKSYNGVAIISKFPLNNAFSLELYNSDK-------R 103 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ +I +V D + + + + +++W+T + Sbjct: 104 HIAAIVNDIEIHNFYV-------PAGGDVPDIEVNTKFKHKLEYVRLMQEWLTTNRTKND 156 Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 +I GD N + + + + Sbjct: 157 KIIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSLLVELQNSLGFIDSSRHFVPFDEKF 216 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + N L + SDH P Sbjct: 217 YTWWSYRNIDWKKSNRGRRLDHIWVSDNLKDAL-------FSMHLLPEARDWPPPSDHVP 269 Query: 298 ISIDYDF 304 ++++F Sbjct: 270 YFVNFNF 276 >gi|228476989|ref|ZP_04061627.1| exodeoxyribonuclease III [Streptococcus salivarius SK126] gi|228251008|gb|EEK10179.1| exodeoxyribonuclease III [Streptococcus salivarius SK126] Length = 275 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 79/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + R + +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLSR------AVIDTLVAENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ S + + K +YP +GA + G Sbjct: 55 KHLQILEDYFPDYDNTWRSSVEPARKGYAGTMFLYKKELNPVITYPEIGAPSTMDCEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V ++ + + L ++ Sbjct: 114 -----IITLEFDNFFVTQVYTPNAGDGLKRLLERQIWDEKYADYLAEL--------DAQK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + + A Sbjct: 161 PVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERAGFTNLLAKGFTDTYRHLNGDVTGAY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGDRQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 VLEID 274 >gi|115481988|ref|NP_001064587.1| Os10g0412100 [Oryza sativa Japonica Group] gi|78708623|gb|ABB47598.1| endonuclease/exonuclease/phosphatase family protein, putative, expressed [Oryza sativa Japonica Group] gi|78708624|gb|ABB47599.1| endonuclease/exonuclease/phosphatase family protein, putative, expressed [Oryza sativa Japonica Group] gi|113639196|dbj|BAF26501.1| Os10g0412100 [Oryza sativa Japonica Group] Length = 605 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 46/351 (13%), Positives = 91/351 (25%), Gaps = 65/351 (18%) Query: 17 TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + + ++S+NI + + + S T L + ADI+ LQE+ Sbjct: 247 SQTSFGTFSVLSYNILADAYATSDAYSYCPTWALSWTYRRQNLMREIIGYHADIICLQEV 306 Query: 75 GSY---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + + K+ + Y ++ D R K V + Sbjct: 307 QLNHFEDFFSPELDKHGYQALYKKRTTEVYTGAPHAIDGCATFFRRDKFSHVKKYEVEFN 366 Query: 132 GAKDSFSRA-----GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT---------- 176 A S + A R A+ L++ N I VL+ + + + Sbjct: 367 KAAQSLTDAIIPSTQRRVALSRLIKDNVALIAVLEAKFGNHGTDNPGKRQLLCVANTHVN 426 Query: 177 -YSPSCSLLSQQAQWLKDWITQKK-ESLVPFVIAGDFNRKINYLGNN------------- 221 + + + Q L + + + +P ++ GDFN + Sbjct: 427 VHQDLKDVKLWEVQTLLKGLEKIAVSADIPMLVCGDFNSVPGSSPHGLLAMGKVDQLHPD 486 Query: 222 -----------------------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 D R + N Sbjct: 487 LAIDPLGILRPASKLTHQLPLVSAYSSFARMVGVGYDLEHQRRRMDPATNEPLFTNCTRD 546 Query: 253 NKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +DY + + E E +D + SDH + ++ Sbjct: 547 FTGTVDYIFYTADSLSVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 597 >gi|163753486|ref|ZP_02160610.1| exodeoxyribonuclease III [Kordia algicida OT-1] gi|161327218|gb|EDP98543.1| exodeoxyribonuclease III [Kordia algicida OT-1] Length = 253 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 32/302 (10%), Positives = 92/302 (30%), Gaps = 72/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+N+N + + ++ + + D++ +QE + + Sbjct: 1 MKIISYNVNGIRA---------------AIRKGFLEWLQQANPDVLCIQETKAQKEQLDL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y+ ++ +A+ K + + + G R Sbjct: 46 EAFEQAGYKYNYWYSAQ-------KKGYSGVAILCK----EEPNNVVYGTGIETMDFEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ I ++ ++L S + Q +K+++ ++ + Sbjct: 95 N-----LRVDYDNISIMSMYLPSGTND--------ARLNFKFQYMDEIKEYLANLRKEIP 141 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP-------------NDSLIRFPKEKDSRCNANKN 250 V+ GD+N + ++ K + + I + + + Sbjct: 142 NLVVCGDYNICHEEIDIHNPKMKGVSGFLPEERAWIGSFIDSGFIDSFRHLNKEPHHYSW 201 Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + IDY ++ + + + + + SDHCPI ++ Sbjct: 202 WSYRANARANNKGWRIDYNMVGKALKDNITRATIL-----------PEAKHSDHCPILVE 250 Query: 302 YD 303 D Sbjct: 251 ID 252 >gi|311347486|gb|ADP90688.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] Length = 518 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 76/331 (22%), Gaps = 71/331 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+VSWNIN + + + + LDADIV LQE + Sbjct: 2 LRVVSWNINGIRRPLQGVANQEPSNCAAV---AVGRILDELDADIVCLQETKVTRDALTE 58 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKDS 136 + + ++S R + + A V G D Sbjct: 59 PLAIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGDVGCYGNMDE 118 Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLL 184 F++ R E K + +++++ LL Sbjct: 119 FTQEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADPGRPERLVFKMRFYRLL 178 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230 +A+ L + +I GD N + Sbjct: 179 QIRAEALLA-------AGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDSLLSN 231 Query: 231 NDSLIRFPKEKDSRCN------------------ANKNLRNKIPIDYFVMDQNAYKFLIQ 272 + L +DY + D+ Sbjct: 232 LGCQSASHVGPFIDSYRCFQPKQEGAFTCWSAVTGARYLNYGSRLDYVLGDRTL------ 285 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 I + SDHCP+ Sbjct: 286 ----VIDTFQASFLLPEVMGSDHCPVGAVLS 312 >gi|74316463|ref|YP_314203.1| endonuclease / exonuclease / phosphatase family protein [Thiobacillus denitrificans ATCC 25259] gi|74055958|gb|AAZ96398.1| endonuclease / exonuclease / phosphatase family protein [Thiobacillus denitrificans ATCC 25259] Length = 251 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 40/283 (14%), Positives = 83/283 (29%), Gaps = 52/283 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +Q + + S+NI+ S LR L DIVFLQE+ + + Sbjct: 2 SQALHIASYNIH----------KGMSQFNRRLMVHELRDRLGGLGTDIVFLQEVQGSHGL 51 Query: 81 A----KVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + +P F + + + + K + H A+ + + Sbjct: 52 RASRFQHWPGRPQHEFLAGQIYTDFAYGKNCVYDTGHHGNAILSRYKITSWE-----NEN 106 Query: 135 DSFSRAGNRRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 S +R + +E+ G + +++HL +Q + Sbjct: 107 ISAHAFESRGMLHCEIEVPGLGTPVHCINVHLGLT-------------ARGRKRQLAMIA 153 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 D + + P ++AGDFN D F + + ++ Sbjct: 154 DRVHKLVPDDAPLILAGDFNDWQMRACRY-----FNDELGLSEVFGTHQGKPARSYPSIF 208 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 +D + ++ + + +SDH Sbjct: 209 PLFQLDRIYVR-----RFTVKAVEVHS------GTLWRGVSDH 240 >gi|50954256|ref|YP_061544.1| exodeoxyribonuclease III [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950738|gb|AAT88439.1| exodeoxyribonuclease III [Leifsonia xyli subsp. xyli str. CTCB07] Length = 278 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 41/318 (12%), Positives = 85/318 (26%), Gaps = 80/318 (25%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++ +R+ + N+N + + + + D DI+ +QE+ + Sbjct: 3 SEHLRVATINVNGIRA---------------AFRRGMGTWLDARDVDILAIQEVRASTDD 47 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + W I + +A+ + V+ ++ DS R Sbjct: 48 LLGLLGDEWDILHDPATAKG----------RAGVAIASRRRAVVHRAGLGPAGFDSAGRW 97 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +E E+ GK I V+ ++ S + ++ + Sbjct: 98 -----LEADYEVGGKAITVVSAYVHSGEAGTPKQADK-------YTFLDAVEARLPVLAA 145 Query: 201 SLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRC 245 V+ GD N L + ++ I + + Sbjct: 146 HSEHGVVLGDLNVGHRTLDIRNWRGNVKRAGFLPEERAYFDRILGAEDEPGYNDGAGLGW 205 Query: 246 ------------NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + IDY + + Y+ D Sbjct: 206 VDVGRKWAGEVDGPYTWWTWRGQAFDNDTGWRIDYQLATPALA-------ATVTDYSVDR 258 Query: 285 IKSRGKRLSDHCPISIDY 302 S +R SDH P+ +DY Sbjct: 259 AASYAERWSDHTPVVVDY 276 >gi|238853021|ref|ZP_04643416.1| exodeoxyribonuclease III [Lactobacillus gasseri 202-4] gi|238834359|gb|EEQ26601.1| exodeoxyribonuclease III [Lactobacillus gasseri 202-4] Length = 275 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 86/305 (28%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL+SWNI++L+ + + R + K D DI+ +QE + Sbjct: 1 MRLISWNIDSLNAALTSDSARAKLTRG------VLNTIKEKDPDIIAIQETKLRSTGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + S + + KN + + P++ A + G Sbjct: 55 KHQEILAEMFPDYDYVWRSSEEPARKGYAGTMFLYKNTLAPEVTKPVIAAPEPMDHEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V ++ + + ++ Q L Sbjct: 114 -----ILTLEFDNYYVTQVYTPNSGNELKRLDDRQVWDEKYTEYLQKLDQ--------NK 160 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + +GD+N + + + F K + Sbjct: 161 PVIASGDYNVAHTPIDLKHPESNHHNAGFTDEERQDFDKLLKLGFTDTFRKVHGNVEGVY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY+++ + + + + DHCPI Sbjct: 221 SWWAQRVRTSKANNSGWRIDYYIVSNRIADQVTKSEMLDTGERK-----------DHCPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 MLEIN 274 >gi|190575838|ref|YP_001973683.1| putative endonuclease/exonuclease/phosphatase family protein [Stenotrophomonas maltophilia K279a] gi|190013760|emb|CAQ47395.1| putative endonuclease/exonuclease/phosphatase family protein [Stenotrophomonas maltophilia K279a] Length = 255 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 44/296 (14%), Positives = 83/296 (28%), Gaps = 60/296 (20%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQYAKNLDADIVF 70 + + +RL++ NI S S + R S + A++ DIV Sbjct: 3 SPRTRTLRLLTANIQAGSSTRRYSDYVTRSWSHALPAGRKRSSLDAIATLARDH--DIVG 60 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYP 129 LQE + + + + + +H R +A + K V Q + Sbjct: 61 LQEADPGSLRSGFTNQTHYLAQRAGFNYWSHQPNRRMGGVASSANGLLSKLEPVEVQDHA 120 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 L G R G R + + V HL Q Sbjct: 121 LPG------RIGGRGVLLAKFGDGADGLAVAVAHLSLGAGS-------------RMSQLG 161 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC--NA 247 ++ + ++ + V+ GDFN + K + + C Sbjct: 162 FIAELLSDHPNA----VLMGDFNCLAERPEMQVLYQK-----------TRLQPPGCIVPT 206 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + R ID+ ++ ++ SDH +++ D Sbjct: 207 FPSWRPDRAIDHILVSSGLQTRTVEAVP--------------AAFSDHLALAMQID 248 >gi|163801448|ref|ZP_02195347.1| hypothetical protein 1103602000598_AND4_11284 [Vibrio sp. AND4] gi|159174937|gb|EDP59737.1| hypothetical protein AND4_11284 [Vibrio sp. AND4] Length = 447 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 37/299 (12%), Positives = 88/299 (29%), Gaps = 32/299 (10%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + S +++ ++NI + + S+ + D++ LQE Sbjct: 172 IAEVESRDNALQVATYNIWMIPSVSSNIFTRASMMEHSL-----------SGYDVLALQE 220 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + S + + + + ++ I+ V +L+ + Sbjct: 221 VFSRH------REPMFDALSAEYPYRTEVVGGDSHAIYDGGVVTLSRYPILESDALVFDH 274 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 ++ V ++ NG+ + + HL SF ++ L + Sbjct: 275 CAGTDCYADKGIVYTKIDKNGEIYHIFNTHLASFDTREAKRLRRLQLGLLRTF------- 327 Query: 194 WITQKKESLVPFVIAGDFNRKINYL-GNNDDFWKTIDPNDSLIR----FPKEKDSRCNA- 247 +T++ + AGDFN N T++ + E A Sbjct: 328 MLTKQIPDDEAVIYAGDFNIDKNSDFSEYLLMLATLEVDPPAYMGYTEATFEPKINPYAL 387 Query: 248 --NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +DY + + + ++ + + LSDH + ++ F Sbjct: 388 AKYSGGEKSEFLDYVFVSLEHRRASKNTNTVKLKQRINKDQWGQWHLSDHFSVVGNFTF 446 >gi|157414552|ref|YP_001481808.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 81116] gi|157385516|gb|ABV51831.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 81116] gi|315932053|gb|EFV11006.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 327] Length = 252 Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 78/304 (25%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + D + QE+ A Sbjct: 1 MKLLSWNVNGLRAICDKNA---------------LDWIAQEQIDFIGFQEI---KAHEDK 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FPK + + + + ++ + +++ + F R Sbjct: 43 FPKKIYEYPFKHMYFNSAKRA-----GYSGVMSLCNFDSEVKK-------CEFFDDEEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++E K I + +I+ + + N + L Sbjct: 91 -----VLEHRFKNIALFNIYFPNGQKDEERLNFKMKFYADFLVYLDKLLK-------DGF 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GD N L + + + F + Sbjct: 139 EIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + L + ++ SDH P+ Sbjct: 199 SWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFIRDDIF-----------GSDHAPVG 247 Query: 300 IDYD 303 I+ D Sbjct: 248 IEID 251 >gi|256787199|ref|ZP_05525630.1| exodeoxyribonuclease (secreted protein) [Streptomyces lividans TK24] Length = 267 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 34/308 (11%), Positives = 76/308 (24%), Gaps = 71/308 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + S N+N L ++ AD++ LQE+ Sbjct: 2 LTVTSVNVNGLRAAAKKGF---------------VEWLAGTSADVLCLQEVR-------- 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + ++ H +++ + + D+ R Sbjct: 39 -AEPHQLPDHAGAPEGWHVTHAPAAAKGRAGVSLYTRREPDAVRVGFGSTEFDTSGR--- 94 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + ++ G + V ++L S ++ + L++ Sbjct: 95 ----YVEADLPG--VTVASLYLPSGEVGTERQDEKVRFMGEFLAYLKELRERA---AAEG 145 Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDP--NDSLIRFPKEKDSR 244 V+ GD+N + + +DP + Sbjct: 146 REVVVCGDWNIAHREADLKNWRANKKNSGFLPEEREWLGRVLDPAEGGYVDVVRALHPDV 205 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + IDY V ++ + +R SDH Sbjct: 206 EGPYSWWSYRGRAFDNDAGWRIDYHVSTPGLAAKAVKGYVE-------RAATHAERWSDH 258 Query: 296 CPISIDYD 303 P+++ YD Sbjct: 259 APVTVVYD 266 >gi|241068614|ref|XP_002408486.1| Apurinic/apyrimidinic endonuclease, putative [Ixodes scapularis] gi|215492474|gb|EEC02115.1| Apurinic/apyrimidinic endonuclease, putative [Ixodes scapularis] Length = 266 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 88/303 (29%), Gaps = 69/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V+WNIN + LLR + + DI+ LQE+ Sbjct: 5 MKIVTWNIN----------------SIKTRLNLLRNFLSKENPDILLLQEIKCETE---- 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ + +A+ K + +++ R Sbjct: 45 ------KFPFDELSNLPYNFYVHGQKSYNGVAIISKFP----ADEIIKDFPNNYYSDQAR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E+ + + ++ ++ + F+ S + + ++++ KK Sbjct: 95 F-LEIKLSLPIGFCNIISLYAPNGSFIGSDKFVAKLAF------YDNFINYLSTKKSFDE 147 Query: 204 PFVIAGDFNRKINYLGNNDDFW---------------KTIDPNDSLIRFPKEKDSRCNAN 248 +I GDFN + +TI + + S+ Sbjct: 148 KTIIGGDFNIAPFDIDVYSPKLLAETTCFTEIEQKKLRTILNSGFEDLYRLMHPSKQE-F 206 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID + N +L D ++ SDH P+ Sbjct: 207 SWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYM-------DYNLRTQEKPSDHIPVI 259 Query: 300 IDY 302 + Sbjct: 260 ASF 262 >gi|332666113|ref|YP_004448901.1| exodeoxyribonuclease III Xth [Haliscomenobacter hydrossis DSM 1100] gi|332334927|gb|AEE52028.1| exodeoxyribonuclease III Xth [Haliscomenobacter hydrossis DSM 1100] Length = 256 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 80/306 (26%), Gaps = 77/306 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++LVS+N+N + ++ + DI+ LQE + Sbjct: 2 SLKLVSYNVNGIRSALNKGW---------------AEWVREHQFDIICLQETKASPEQVD 46 Query: 83 VFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + P + ++ + + +S + + + G + Sbjct: 47 LSPIADLGYHAYWHSAQKKGYSSVATFSKREPDQVI--------------AGCGMAKYDD 92 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + + + +L+ + S D + + A L+ Sbjct: 93 EGRI-----LRSDFGDLTILNCYFPSGTTGDVRQEFKMVFLEDFFKWAHELQK------- 140 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCN 246 ++ GD+N +D N + + Sbjct: 141 ERPKLIVLGDYNIAHTERDIHDPRGNKNSSGFLPEEREWLSKWFNSGFTDAFRFLNPDKV 200 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDY + N L S ++ E SDHCP Sbjct: 201 EYSWWSFRAGARKNNKGWRIDYQSVSDNLRDNL--RSARQMNEAEH---------SDHCP 249 Query: 298 ISIDYD 303 + ++ D Sbjct: 250 VLVELD 255 >gi|290770111|gb|ADD61872.1| putative protein [uncultured organism] Length = 322 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 35/314 (11%), Positives = 81/314 (25%), Gaps = 54/314 (17%) Query: 25 RLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLDADI----- 68 + +N+ L + + + + K+ S L + +L D+ Sbjct: 15 SVAFYNLENLFDTIHDAGKNDYEFLPDGSYQWTAKKYESKLQNLSKVLGSLSRDLVPEGP 74 Query: 69 --VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 + + E + + + + + I A+ K V Sbjct: 75 AFIGVAEAENSRVLEDLVKQPAISNYEFVHYEGP-----DRRGIDCALLYDPKQFSVTHS 129 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 L + + R + + ++ G+++ V+ H S SP ++ Sbjct: 130 KLVLSTPFEGDTVHLTRGFLIVDGQLAGERVCVIVNHWPSR-------GAKSPVRVHAAR 182 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN-----NDDFWKTIDPNDSLIRFPKEK 241 Q + LKD + + + + ++ GD N + + + Sbjct: 183 QVKALKDSLMR-SDKKLKLIVMGDMNDDPMDESMEVLGARKYPKQVKKGEFYNPWWETLE 241 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI------------------LYNED 283 D D V+ + K + Sbjct: 242 DKGVGTLLYRGKWNLFDQIVISKPLLKAKKGLRYDHNEVFIRDYLIQQDGKYKGSPLRTH 301 Query: 284 DIKSRGKRLSDHCP 297 ++ SDH P Sbjct: 302 GGRTWLNGYSDHLP 315 >gi|301121032|ref|XP_002908243.1| carbon catabolite repressor protein, putative [Phytophthora infestans T30-4] gi|262103274|gb|EEY61326.1| carbon catabolite repressor protein, putative [Phytophthora infestans T30-4] Length = 1180 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 43/344 (12%), Positives = 97/344 (28%), Gaps = 64/344 (18%) Query: 24 VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 R++++NI + ++ + LL++ ++ +ADI+ LQE+ + + Sbjct: 250 FRVLTYNILAEIYATRQMYPYCPIWALSWSFRRELLKRELQSYNADIICLQEVQGDHYKS 309 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP------------ 129 P + + + K+N +L++ YP Sbjct: 310 FFAPMMEEWGYEGWYLKKSRESMGLEGKVDGCALFYKRNRFILKERYPVDFNDLANDFLT 369 Query: 130 --------------------LLGAKDSFSRAGNR-----RAVELLVEINGKKIWVLDIHL 164 L + + R AV +V N + + Sbjct: 370 QVQTEYDLDYQGPSMAAREMFLSTLNKMRQRLQRDNVAQIAVLEVVPANNEVVARKSQSG 429 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKINYLGNNDD 223 C + + + Q L + + +P ++ GDFN + + Sbjct: 430 PLICITNVHIFSNPKFPDVKMWQTNMLAKQLERVTLSRNLPTILCGDFNSEPSSAVYEFM 489 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNAN---------------------KNLRNKIPIDYFVM 262 + + I+ P ++ + A+ + +DY Sbjct: 490 TRNHVLLDHPDIQCPPQQLANIYASLDLEHNIGFASAYASVFGAEPEYTNYTGVVDYVWY 549 Query: 263 DQNA---YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + L + + LSDH P+ +D+ Sbjct: 550 TPETLTPFAGLKVHPPEVLEAYSKTALPNCQFLSDHIPLCLDFS 593 >gi|332022825|gb|EGI63098.1| Putative neutral sphingomyelinase [Acromyrmex echinatior] Length = 391 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 85/288 (29%), Gaps = 32/288 (11%) Query: 30 NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89 N+ TL+ + +N +R + + + + + DI+ LQE+ S N ++ K Sbjct: 8 NVLTLNCWGIPYVSRNKNER----MSAIAEKCISREYDIICLQEVWSVNDFNQIKTK--- 60 Query: 90 CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAKDSFSRAGNRR 144 + ++ HS + + + I + + + G + Sbjct: 61 -----VQEVLPHSHYFHSGVLGSGICILSRYPIHDVMFHKWPLNGYVHKIHHGDWFGGKG 115 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 +++ I V HL + + QA ++ + Sbjct: 116 VGLCKIKVFNMYINVYITHLHA-----EYNRENDEYMAHRVLQAFDTAQFVKMTSGGVDA 170 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN--------LRNKIP 256 + AGD N + L + + + C N N Sbjct: 171 VIFAGDLNTEPQDLAYRIIRGVSGLADTCPDSQSHIGTNECANNSYTSSKLARTQPNGKR 230 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ + + + +F L + + + SDH + F Sbjct: 231 IDHIMYLGSNTVKVEVTNFGHPL--PNRVPYKNFSYSDHEAVMATLKF 276 >gi|317154705|ref|YP_004122753.1| exodeoxyribonuclease III [Desulfovibrio aespoeensis Aspo-2] gi|316944956|gb|ADU64007.1| exodeoxyribonuclease III [Desulfovibrio aespoeensis Aspo-2] Length = 283 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 78/303 (25%), Gaps = 76/303 (25%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + SWN+N R + D+V LQE + ++ P Sbjct: 30 IYSWNVNGYRA---------------VIKKNFRDWLDGCGGDVVMLQE--TKAHPDQLAP 72 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + Y+ K ++ +A + +G D+ + R Sbjct: 73 EEREPDSYANHYWNWSRK----KKGYSGVACFANPEPLAVT----IGLPDARFQGEGR-- 122 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++ + + +I+ + D AQ L+ P Sbjct: 123 ---VLHLEYPDFHLFNIYFPNGQMGDDRLAFKMGFYDAFLDHAQALRK--------TKPI 171 Query: 206 VIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 V+ GDFN + I + + + Sbjct: 172 VVGGDFNTAHCEIDLKNPKANAERSGFLPEERAWIDRFIAHG--YVDTFRLFEDGPGHYS 229 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF + + +++ + SDHCPI + Sbjct: 230 WWSYRFNARQNNAGWRIDYFFVSEELRPKVVRAWIEPEVP-----------GSDHCPIGV 278 Query: 301 DYD 303 + D Sbjct: 279 EID 281 >gi|304390853|ref|ZP_07372805.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304325736|gb|EFL92982.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 294 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 35/283 (12%), Positives = 74/283 (26%), Gaps = 48/283 (16%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + +N D+D++ LQE+ + + W + R+ + + Sbjct: 21 DWLENDDSDLLCLQEVRATPQDTQDLFGPAWDVHVWPCRVKGRAGVALGARRDSD----W 76 Query: 119 KNVRVLQQSYPLLGAK--DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + ++ + P L A+ R + G ++ +L S + Sbjct: 77 EIGQLTEGLPPDLYAEVGGEPDVDSGRWLEAAIHGPQGTTFTLVSAYLHSGELRTEKQEQ 136 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDD----------- 223 + ++ Q L S P +I GDFN + Sbjct: 137 KIAYLHRVGERVQQLSARAIAGVGSDTPQEALICGDFNIVRTARDIKNWKPNHNKTSGVM 196 Query: 224 ----------FWKTIDPNDSLIRFPKEK---DSRCNANKNLRNK---------IPIDYFV 261 T+ + L + + +DY + Sbjct: 197 DEEIAFLDAWMADTLSGSKGLPCVDVGRALVGDTDGPYTWWSWRGKAYDNNAGWRLDYHM 256 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + R +DH P+++ YDF Sbjct: 257 ATPGLAGQAQSAAV-------YRAPAYDARFTDHAPVTVTYDF 292 >gi|291545257|emb|CBL18366.1| exodeoxyribonuclease III [Ruminococcus sp. 18P13] Length = 256 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 37/299 (12%), Positives = 79/299 (26%), Gaps = 78/299 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + DAD +QE A Sbjct: 1 MKLISWNVNGLRACREKGFE---------------AFFAQEDADFFCIQETK-LQAGQIQ 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ ++ AV K++ + Q L A + R Sbjct: 45 LELPGYNQYW----------HYADKKGYSGTAVFTKHIPLSVQRDFGLPAHNGEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++++ ++ + + L+ ++ ++ Sbjct: 91 -----VLTLEYPDFYLVNAYVPN-------SKRELLRLDYRMEWEDALRQYL-LGLDARK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N T+ + F A Sbjct: 138 PVIYCGDLNVAHREIDLKNPKSNRRNAGFTDEERGRLSTLLDSGFTDTFRLLYPDTAGAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 IDYF++ + D + + SDHCP+ Sbjct: 198 TWWSYMFHAREKNAGWRIDYFIVSNRIAPLVQ-----------DSLIYKDVLGSDHCPV 245 >gi|296454347|ref|YP_003661490.1| exodeoxyribonuclease III Xth [Bifidobacterium longum subsp. longum JDM301] gi|296183778|gb|ADH00660.1| exodeoxyribonuclease III Xth [Bifidobacterium longum subsp. longum JDM301] Length = 286 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 81/311 (26%), Gaps = 57/311 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VA 81 + + + N+N + + + +A +D+ +QE+ + V Sbjct: 2 TITITTSNVNGIRA---------------AKRKGIEDWAGKHASDVWCIQEVRAPQDDVD 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRD----SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +F + + + + + + + + ++ ++D Sbjct: 47 SIFDEFGFEYATAGKIEAPANLHAMNEVCRVKGRAGVGLLTDLEVLDKRYGLPGLSEDVD 106 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 S R + G I V +++ + D L + + + Sbjct: 107 S---GRWIETDVKTPEGYAITVASVYVHAGNTDD--PTKMEQKYRFLDTMLKRMGALRDE 161 Query: 198 KKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEK 241 V+ GDFN K +D + + Sbjct: 162 AAHGGKQAVLCGDFNIAHTPLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLA 221 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + IDY + + + D + KR Sbjct: 222 GDIQGPYTWWSQRGRAFDNNVGWRIDYQFATPELAE-------TARGFVIDKAPTYDKRW 274 Query: 293 SDHCPISIDYD 303 SDH P++I Y+ Sbjct: 275 SDHAPLTITYE 285 >gi|163789004|ref|ZP_02183448.1| endonuclease/exonuclease/phosphatase family protein [Flavobacteriales bacterium ALC-1] gi|159875668|gb|EDP69728.1| endonuclease/exonuclease/phosphatase family protein [Flavobacteriales bacterium ALC-1] Length = 332 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 45/302 (14%), Positives = 94/302 (31%), Gaps = 55/302 (18%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 F + + L+S+N+ + + T +++ +++ D Sbjct: 76 LFFQFSLNTNIKTKDSISLISYNVRSF-------KQPVHSDSQQNAITEIKKIVDSINPD 128 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 I+ LQE +++ + N + T + + K + + Sbjct: 129 ILLLQE-------------SSYKEGLRIKGYSNVFLGYRKDVQKTLLTIYSKYPIINKGF 175 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ- 186 ++ A+ ++I + + + HL+SF F + + LS Sbjct: 176 IDFSDTYNN--------AIFADLKIKQDTVRIYNTHLQSFVFAPHIIADKYNDYNYLSNL 227 Query: 187 ------QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 Q + K +S +I GDFN +Y K ++ + + Sbjct: 228 NSTISKQVEQAKLVKNHASKSNSKVIICGDFNAT-SYSQPYRILKKELNDS-----YVSN 281 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + LR + +DYF+ D+ + LSDH PI I Sbjct: 282 GNGFGATYSLLRYPLRLDYFLSDKQIEVLSHKN--------------FDFNLSDHEPIYI 327 Query: 301 DY 302 + Sbjct: 328 KF 329 >gi|157803480|ref|YP_001492029.1| exodeoxyribonuclease III [Rickettsia canadensis str. McKiel] gi|157784743|gb|ABV73244.1| exodeoxyribonuclease III [Rickettsia canadensis str. McKiel] Length = 273 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 81/307 (26%), Gaps = 72/307 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V+WNIN+L LLR+ A DI+ LQE +++ Sbjct: 1 MKIVTWNINSL----------------RLRIDLLRKLAHEHKPDIILLQETKVADSL--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + S + +A+ K S L + Sbjct: 42 ------FPLEVIKNIGYEHIIYSGQKSYNGVAIISKFPLNNVFSLELYNSDKRH------ 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + V I V + ++ + D + + + + +++W+T + Sbjct: 90 --IAATVN----DIEVHNFYVPAG--GDIPDIEINLKFKHKLEYVRLMQEWLTVNRTKND 141 Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 +I GD N + + + Sbjct: 142 KIIIVGDLNIAPHEHDVWSSRQLRNVISHTDIERSLLVGLQNSLGFIDSSRHFISLDEKF 201 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + N L N SDH P Sbjct: 202 YTWWSYRNIDWKKSNRGRRLDHIWVSNNLKDAL-------FSINLLSEARDWVPPSDHVP 254 Query: 298 ISIDYDF 304 ++++F Sbjct: 255 YFVNFNF 261 >gi|119385102|ref|YP_916158.1| exodeoxyribonuclease III Xth [Paracoccus denitrificans PD1222] gi|119374869|gb|ABL70462.1| exodeoxyribonuclease III Xth [Paracoccus denitrificans PD1222] Length = 261 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 31/307 (10%), Positives = 72/307 (23%), Gaps = 75/307 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81 + +WNIN L+ ++ DI+ LQE S N Sbjct: 2 FTIATWNIN----------------SVRLREALVARFLTEEAPDILCLQETKSPVENIPL 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F + F + +A+ K G + Sbjct: 46 EAFRALGYDHF-----------VARGQKGYNGVAILSKLPIEDAGDRDYAGLGHARH--- 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 V +E + + + ++ + D + + ++D + Sbjct: 92 ----VAARLENG---VTIHNFYVPAG--GDIPDREQNVKFGQKLDFLTEMRDV--FHADR 140 Query: 202 LVPFVIAGDFNRKINYLG--NNDDFWKTID-------------PNDSLIRFPKEKDSRCN 246 ++ GD N ++ K + + ++ + Sbjct: 141 PARSIMVGDLNIAPREDDVWSHKQLLKIVSHTPIEVEHLGAAQDAGKWVDITRKDIPQGL 200 Query: 247 ANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ + ++ SDH Sbjct: 201 LYSWWSYRARDWDAADKGRRLDHIWATPDIANAGHNS-------RILRPLRGWQQPSDHV 253 Query: 297 PISIDYD 303 P+ +D Sbjct: 254 PVLASFD 260 >gi|301096675|ref|XP_002897434.1| 2',5'-phosphodiesterase, putative [Phytophthora infestans T30-4] gi|262107125|gb|EEY65177.1| 2',5'-phosphodiesterase, putative [Phytophthora infestans T30-4] Length = 574 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 44/342 (12%), Positives = 91/342 (26%), Gaps = 63/342 (18%) Query: 22 QKVRLVSWNINTLS-------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + R++S+N+ ++ S + V + T L+ + ++D+V LQEM Sbjct: 237 EAFRVMSYNVLYNGYATTDHAKKNLFSYVDDDVMKETRRIQLILHEIEENNSDVVCLQEM 296 Query: 75 GS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------IHTAIAVR-KK 119 G + + + FYS + + + I+ +IAV+ Sbjct: 297 GEHVFNHFFKPMLASIGYHSFYSDKTGTTNEGCATFIRTSRFEVVEQETINLSIAVKNST 356 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 +R + + +L ++ + F D+ Sbjct: 357 IPASQSLLQDFPELAKGIARIPSIAQLLILRSKLDPARTIILSNTHLFYRGDAHLIRLLQ 416 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------------NYLG 219 ++ + W + V+ GD+N Sbjct: 417 GAAV----VDTVSQWKAKSSFENAAVVMCGDYNAHPRCALVAFLLDGQLDSSHRHWQQAP 472 Query: 220 NNDDFWKTIDPND----------SLIRFPKEK------DSRCNANKNLRNKIPIDYFVM- 262 + ID D RF N +DY ++ Sbjct: 473 SFRWNLSKIDDKDSKIQEKVTEVRPNRFEHSLQLVSACGIPAFTNYVTSFVDTLDYIMVG 532 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + F+E + SDH + D + Sbjct: 533 SKTLQVRDVFPLFTEEQVTHEVALPSSTFPSDHISLVCDLTW 574 >gi|320163263|gb|EFW40162.1| hypothetical protein CAOG_00687 [Capsaspora owczarzaki ATCC 30864] Length = 326 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 39/316 (12%), Positives = 85/316 (26%), Gaps = 31/316 (9%) Query: 12 FLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 F T + A +VR++ +N + L + + LL Q D DI Sbjct: 14 FAASTTPASADMPRRVRILQFNTLADGLSDAFPLVEKRLLSWPHRSALLLQEILAHDPDI 73 Query: 69 VFLQEMGS-YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 LQE+ + ++ + + +R + + R K ++Q Sbjct: 74 ACLQEVDHFDDFFESELAQHGYTGIFKPKRDDGKADGCA------TFFKRSKFEVHIRQD 127 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGK--KIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 D + A+ + + G + F L++ + Sbjct: 128 LEYRKVIDDKDVSQV--AILTVFKPAGVAPNADGIVSREGLFAVLNTHLKAKDEFEATRV 185 Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNN-----------DDFWKTIDPND 232 ++ + D + + + +P VI+ D N + + + Sbjct: 186 KEVSAVLDVLAKLQAQFPRIPMVISSDMNTEPTGPVYELLEKGLVSFSGSSYTHRLSLKS 245 Query: 233 SLIRFPKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + +R IDY + + Sbjct: 246 AYALYKDGGGEPDYTTWKIRPPVEVARVIDYLWYTPETLLPIQLLALPGPETLPPTRLPS 305 Query: 289 GKRLSDHCPISIDYDF 304 SDH + ++ F Sbjct: 306 ENYPSDHFALLAEFGF 321 >gi|302867670|ref|YP_003836307.1| endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca ATCC 27029] gi|302570529|gb|ADL46731.1| Endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca ATCC 27029] Length = 259 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 37/308 (12%), Positives = 82/308 (26%), Gaps = 79/308 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78 +RL ++N+ + + L +LDAD++ LQE+ Sbjct: 1 MRLATFNLLHGRSLTDGLVDPD----------RLTAAVTDLDADVLALQEVDRDQTRSGK 50 Query: 79 -----AVAKVFPKNTWCIFYSTERLINHSKR------DSNNDIHTAIAVRKKNVRVLQQS 127 A+ + + R D + + I + ++ Q Sbjct: 51 LDLTAVAARALHADHHRFAAAVVGTPGEQFRPLTHDDDGHGEPLYGIGLISRHPVRSWQV 110 Query: 128 Y-------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 P G R R + +++ + V HL + Sbjct: 111 TRLRAAPIRSPIYAPGPGGGLVLLRDEPRVVLAAVLDTPHGPLTVAATHLSFVPGWN--- 167 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 L+ + + P ++ GD N + + Sbjct: 168 -------------IWQLRRVVRVLRTLPAPRILLGDLN---------------LPAGPAA 199 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + +R + ++ +D+ + D++ L + +SD Sbjct: 200 ALTRWQPLARRPTYPAGQPRVQLDHILADRHGLDRLPAVTAVHTPLAT---------ISD 250 Query: 295 HCPISIDY 302 H P+ +D Sbjct: 251 HRPLVVDL 258 >gi|290963006|ref|YP_003494188.1| hypothetical protein SCAB_87261 [Streptomyces scabiei 87.22] gi|260652532|emb|CBG75665.1| putative secreted protein [Streptomyces scabiei 87.22] Length = 289 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 36/287 (12%), Positives = 80/287 (27%), Gaps = 65/287 (22%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA--- 81 R+++WNI S+ + ++ LQE + Sbjct: 58 RVMTWNICN--------------PCDESNVDR-AAEIAAVAPQVIGLQEACVRDVERIRE 102 Query: 82 --KVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + F + + + S + A+ + +GA+ Sbjct: 103 YLETFHGLVYHVEYGSVLGSWSRCGGAPWKPGGFGQAILSAGPLTDR-----VGAEYPEG 157 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + +R + + + G+ + + + HL ++ + Q L + + + Sbjct: 158 GSEDRGYMAVTATVGGQPVRIFNTHL-----------AQRRQEAIRADQVDVLAEEVARH 206 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + ++ GDFN + WK D+ R P + C + + D Sbjct: 207 DRA----IVVGDFNAVPDSAEL-APMWKVAKDADTACRPP--SEGACGLTTDWQ--SKFD 257 Query: 259 YFVMDQ--NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 Y + + + SDH + D D Sbjct: 258 YVFLRGVSPLAQRVRLSE-----------------SSDHNLVYADVD 287 >gi|260654366|ref|ZP_05859856.1| endonuclease/exonuclease/phosphatase family protein [Jonquetella anthropi E3_33 E1] gi|260630999|gb|EEX49193.1| endonuclease/exonuclease/phosphatase family protein [Jonquetella anthropi E3_33 E1] Length = 282 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 40/291 (13%), Positives = 92/291 (31%), Gaps = 37/291 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 A+ L ++NI + + T D L Q ++ AD++ LQE+ Sbjct: 17 FQPLPAEAFSLGTFNIEYFAVTGQ-------KRYTPEDCAHLAQTIQDSRADLLSLQEIE 69 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 A+ + ++ ++ + + +V S+ G+ Sbjct: 70 GDGAMTYLVARHLPGWRFAGNDTASSQDLYFLWKDSAVQMLSGPDVYFANASFQHDGSTF 129 Query: 136 SFSRAGNRRAVELLV--EINGKKIWVLDIHLK--SFCFLDSLENTYSPSCSLLSQQAQWL 191 R +R + + +G + ++++HLK S + + + + + + Q + L Sbjct: 130 ---RLFDRPPLVATFKDKASGFQFTLVNVHLKSQSTRGKSDVVSAKAYNDAKRAAQLEAL 186 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 ++ P I GDFN + ++ + D L Sbjct: 187 DRLVSSL---NGPIFITGDFN-----YESPKTAFRLLTLPDGL-------------YSYD 225 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D+ F + E + + DH + +D+ Sbjct: 226 ATRSSLDHI--GYAGLTFSRPPALREAESSIPRRSPGRSQHPDHDIVLLDF 274 >gi|325967886|ref|YP_004244078.1| exonuclease [Vulcanisaeta moutnovskia 768-28] gi|323707089|gb|ADY00576.1| exonuclease [Vulcanisaeta moutnovskia 768-28] Length = 246 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 41/299 (13%), Positives = 81/299 (27%), Gaps = 73/299 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+VSWNIN L R+ + L + + D+V LQE+ S + Sbjct: 1 MRIVSWNINGL--------------RSIMRKSSLDKLLSMDNYDMVLLQEIRSSGDIPLT 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ + K + + DS R Sbjct: 47 IIGLGYEAYPFPAIRKGYA----------GVMTLTKIHPISVIKGIGINELDSEGRI--- 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +V++ + S + C + + L+ S Sbjct: 94 ------ITVEFNDFYVVNTYFPRAGDDLSRLDFKLSFCGAIEKFLANLR--------SKK 139 Query: 204 PFVIAGDFNRKIN--------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 P ++ GDFN + L + + I +E Sbjct: 140 PIIMCGDFNIARDKIDSSFWDEKHPGLTLEERAWLNQFLKSG--YIDTFRELHPNAKVYT 197 Query: 250 NLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + IDY ++ + + + SDH P+ I+ Sbjct: 198 WHSYREKWRAMRIDYCIVSKELMSKVRKAEILT-----------NIEGSDHVPVMIEVS 245 >gi|320528523|ref|ZP_08029680.1| exodeoxyribonuclease III [Solobacterium moorei F0204] gi|320131109|gb|EFW23682.1| exodeoxyribonuclease III [Solobacterium moorei F0204] Length = 251 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 29/305 (9%), Positives = 71/305 (23%), Gaps = 80/305 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 ++ +SWN+N L + DAD LQE + + Sbjct: 1 MKFISWNVNGLRAAMKKGF---------------ADFFHEQDADFFALQETKMQPDQLED 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + ++ ++ +S + + + Sbjct: 46 AMKFEGYHMYMNSAERKGYSGTLIYTK---------------HEPLSVTYEIEGDVTKEG 90 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R ++ + + + ++ + +L + L + Sbjct: 91 R-----VITLEYPDFYFVCAYVPNSKDGLLRLPYRIEWEEMLRKHLMEL--------DKK 137 Query: 203 VPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P + GD N + + + F + Sbjct: 138 KPVIYTGDLNVAHEEIDLKNPATNHKNPGFSDEERAAMTKLLDSGFSDTFRELYPDTQK- 196 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF++ + + + SDHCP+ Sbjct: 197 FSWWSYRMKARERNVGWRIDYFLVSERLLANVQDALIFDET-----------EGSDHCPV 245 Query: 299 SIDYD 303 ++ + Sbjct: 246 GLNIN 250 >gi|212541981|ref|XP_002151145.1| transcription factor, putative [Penicillium marneffei ATCC 18224] gi|210066052|gb|EEA20145.1| transcription factor, putative [Penicillium marneffei ATCC 18224] Length = 685 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 41/364 (11%), Positives = 92/364 (25%), Gaps = 79/364 (21%) Query: 16 CTASVAQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + + A K ++S+N + + L+ ++ DADI LQE Sbjct: 304 SSQAQADKFTVLSYNTLCDQSASPSHYGYVPSRALAWEFRRDLILNEIRSHDADIACLQE 363 Query: 74 MGS---YNAVAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVL---- 124 + + N + Y + H + D K + + Sbjct: 364 IDQGNYNEFFREQLAYNDYKGVYWPRGRAMGMHEEEAKTVDGCATFFKASKYILLDKQMI 423 Query: 125 ------QQSYPLLGAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLE 174 + G D ++R + + ++V + G ++ V++ HL + + + Sbjct: 424 NFGQTAVRRPDAKGQDDIYNRLWQKDHIAVVVFLENRMTGTRLIVVNAHL---YWDPAFK 480 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLV------------------------------- 203 + ++L ++ L + ++ Sbjct: 481 DVKLIQTAILMEEITKLSEKYSKFPPCTDKTAFRFSEAEDGAREATTPVEPAPSAEYSSG 540 Query: 204 ---PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRC 245 P +I GDFN N + + F + Sbjct: 541 DQIPLLICGDFNSAPGEAAYNLLAHGGLTEAHPDLEKRLYGNLSRVGMTHPFKLKSAYSA 600 Query: 246 -----NANKNLRNKIPIDYFVMDQ-NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N +DY + + + SDH + Sbjct: 601 IGELSFTNYTPDFNSILDYIWFSSTALHVTGLLGEVDKEYLQRVPGFPNYHFPSDHLALL 660 Query: 300 IDYD 303 ++ Sbjct: 661 AEFS 664 >gi|86153870|ref|ZP_01072073.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842831|gb|EAQ60043.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni HB93-13] Length = 252 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 78/304 (25%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + D + QE+ A Sbjct: 1 MKLLSWNVNGLRAICDKNA---------------LDWIAQEKIDFIGFQEI---KAHEDK 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FPK + + + + ++ + +++ + F R Sbjct: 43 FPKKIYEYPFKQMYFNSAKRA-----GYSGVMSLCNFDSEVKK-------CEFFDDEEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++E K I + +I+ + + N + L Sbjct: 91 -----VLEHRFKNIALFNIYFPNGQKDEERLNFKMKFYADFLVYLDKLLK-------DGF 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GD N L + + + F + Sbjct: 139 EIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + L + ++ SDH P+ Sbjct: 199 SWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFIRDDIF-----------GSDHAPVG 247 Query: 300 IDYD 303 I+ D Sbjct: 248 IEID 251 >gi|290959716|ref|YP_003490898.1| exodeoxyribonuclease III [Streptomyces scabiei 87.22] gi|260649242|emb|CBG72356.1| putative exodeoxyribonuclease III [Streptomyces scabiei 87.22] Length = 267 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 33/308 (10%), Positives = 74/308 (24%), Gaps = 73/308 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 + + S N+N L ++ AD+V LQE+ Sbjct: 2 LTVTSVNVNGLRAAAKKGF---------------VEWLAGTSADVVCLQEVRAEPEQLPE 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 V W + ++ + +++ + + D R Sbjct: 47 GVRQPEGWHVVHAP----------AAAKGRAGVSLYSRREPDRVRIGFGSAEFDGSGR-- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++ G + V ++L S ++ + L++ Sbjct: 95 -----YVEADLPG--VTVASLYLPSGEVGTERQDEKVRFMGEFLPYLKDLRERA---AAD 144 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTID--PNDSLIRFPKEKDS 243 V+ GD+N + + +D + Sbjct: 145 GREVVVCGDWNIAHQQADLKNWRANQKNSGFLPEEREWLGRVLDEGDGGYVDVVRALHPE 204 Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + ID V ++ + S +R SD Sbjct: 205 VEGPYSWWSYRGRAFERDTGWRIDLAVATPGLASKAVKAFV-------ERAASHDERWSD 257 Query: 295 HCPISIDY 302 H P+++ Sbjct: 258 HAPVTVVL 265 >gi|148554033|ref|YP_001261615.1| hypothetical protein Swit_1111 [Sphingomonas wittichii RW1] gi|148499223|gb|ABQ67477.1| hypothetical protein Swit_1111 [Sphingomonas wittichii RW1] Length = 351 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 90/311 (28%), Gaps = 39/311 (12%) Query: 13 LVPCTASVAQK-VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 +P A + ++++N+ L +++ R LR +V L Sbjct: 38 ALPHPAPRGDAGLSVMTYNVEGLPWPARFGR-GDALARIGERLAALRA--TGAQPRVVLL 94 Query: 72 QEMGSYNAVA-KVFPKNTWCIFYSTERLINHS-----------------KRDSNNDIHTA 113 QE S +A A + + + F + L S + + Sbjct: 95 QEAFSDDAKAIRAASGHRYAAFGPDDALAGPPTRSPADRAFAAEASFLKGERSGKLLDSG 154 Query: 114 IAVRKKNVRVLQQSYPLLGAKD-SFSRAGNRRAVELLVEING--KKIWVLDIHLKSFCFL 170 + + + + A + N+ V +V + G I V+++HL S Sbjct: 155 LVILSDYPILSVRRAAFPAAACAGYDCLANKGMVMAVVAVPGAPGPIAVVNLHLNSKRAS 214 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 + + QQ L ++ +P ++ GDFN + + Sbjct: 215 G---VAIERADAAFRQQVAALDRFLAANHVPGMPMIVGGDFNIG-RSAARRTMVMEVLAR 270 Query: 231 NDSLIRFPKEK------DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + +A+ + D+ + A L Sbjct: 271 HHGTAPADALSACTGVCRDGLSADAREARRRAKDWQFLIPGAAADLTVRRI----ATPFG 326 Query: 285 IKSRGKRLSDH 295 ++ G LSDH Sbjct: 327 READGSMLSDH 337 >gi|218129905|ref|ZP_03458709.1| hypothetical protein BACEGG_01488 [Bacteroides eggerthii DSM 20697] gi|217988015|gb|EEC54340.1| hypothetical protein BACEGG_01488 [Bacteroides eggerthii DSM 20697] Length = 335 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 38/343 (11%), Positives = 91/343 (26%), Gaps = 61/343 (17%) Query: 1 MIRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSE-------QEGVSLWKNSVKRT 50 M + L F V A+ + + +N+ L + + L S + T Sbjct: 1 MRKVTFLFSFCFCVIVAAAQNTECKLYSIAFYNLENLFDTIHDAGKNDHDFLPDGSYQWT 60 Query: 51 TSDYT-----------LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99 Y L + ++ + E+ + + + + + Sbjct: 61 AKKYESKLHNLSMVLGSLSRNLVPEGPAVIGVAEVENRRVLTDLVSQPAISNYKFIHYEG 120 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + I A+ + V L + + R + + + +++ V Sbjct: 121 PDKR-----GIDCALLYDPQQFTVTNSKLVLSTPFEGDTVHLTRGFLIVDGRLADERVCV 175 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 + H S SP ++Q + L D + +++ + + GD N Sbjct: 176 IVNHWPSR-------GAKSPVRVHAAKQVKVLTDSL-LREDKKLKLFVMGDMNDDPMDES 227 Query: 220 N-----------------NDDFWKTIDPNDSLIRFPKEKDSRC------NANKNLRNKIP 256 + +WKT++ + K + + + Sbjct: 228 MQTLGARKYISGMKAKQFYNPWWKTLEDKGVGTLLYRGKWNLFDQIVLSRPLVKTKKGLR 287 Query: 257 IDY--FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 D+ + + + + SDH P Sbjct: 288 YDHNEVFIRDYLIQ--QDGKYKGSPLRTHGGRVWLNGYSDHLP 328 >gi|119192450|ref|XP_001246831.1| hypothetical protein CIMG_00602 [Coccidioides immitis RS] gi|121932279|sp|Q1EA11|CCR4_COCIM RecName: Full=Glucose-repressible alcohol dehydrogenase transcriptional effector; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase Length = 687 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 36/360 (10%), Positives = 87/360 (24%), Gaps = 81/360 (22%) Query: 22 QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 K +++N + + + + LL + DADIV LQE+ + Sbjct: 310 NKFTALTYNTLCDRYATNQQYGYAPSRALAWEFRRDLLLNEIRGHDADIVCLQEIDQGSY 369 Query: 80 VAKVFPKNTWCIFYSTERLINH------------SKRDSNNDIHTAIAVRKK---NVRVL 124 + + + + I + K + Sbjct: 370 HGFFREQLAYNDYKGVYWPKGRAQGMPEEEAKLVDGCATFFKGSKYILLEKNMIHFGQTA 429 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + G D ++R + + ++V + G+++ V++ + + ++ Sbjct: 430 VRRPDAKGQDDIYNRLWQKDNIAVIVFLENRLTGERLIVVN---AHIYWDPAYKDVKLIQ 486 Query: 181 CSLLSQQAQWLKD------------------------------------WITQKKESLVP 204 +++ ++ L + + S +P Sbjct: 487 VAIMMEEVTQLAEKYVKIPPCTDKTAFRFSEPEDGKESQGTSTPVEPAPSVEYSSASQIP 546 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC---- 245 ++ GDFN + + F + Sbjct: 547 ILVCGDFNSCPGSAVYNLLAHGRMAEEHPDLEQRLYGNLSRMGMSHPFTLKSAYSTIGEL 606 Query: 246 -NANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 N IDY N + + SDH + ++ Sbjct: 607 SFTNYTPGFTDVIDYIWYSSNTLQVTALLGEVDKEYLKRVPGFPNYHFPSDHLALMAEFS 666 >gi|329664474|ref|NP_001192653.1| deoxyribonuclease gamma [Bos taurus] gi|297488566|ref|XP_002697036.1| PREDICTED: deoxyribonuclease I-like 3 [Bos taurus] gi|296474868|gb|DAA16983.1| deoxyribonuclease I-like 3 [Bos taurus] Length = 305 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 40/293 (13%), Positives = 92/293 (31%), Gaps = 32/293 (10%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + A +++ S+N+ + E + + ++ + K DI+ L E+ Sbjct: 14 STHSALALKICSFNVRSFGESKKANCNA---------MDVIVKVIKRC--DIILLMEIKD 62 Query: 77 YN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + + + N+ + + R++ + + A ++K V V +QSY Sbjct: 63 SSNRICPTLMEKLNGNSRKGITYNYVISSRLGRNTYKEQY-AFLYKEKLVSV-KQSYLYH 120 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + + +R + + + I S + + A Sbjct: 121 DYQAGDADVFSREPFVVWFQSPYTAVKDFVIVPLHTTPET--------SVREIDELADVY 172 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 D + F+ GDFN +Y+ + + + +++ Sbjct: 173 TDVKRRWNAEN--FIFMGDFNAGCSYVPKKAWKDIRLRTDPKFVWLIGDQEDTTVKKSTN 230 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 I + QN ++ +S + + S K L SDH P+ Sbjct: 231 CAYDRI--VLRGQNIVNSVVPQSNLVFDFQKAYRLSESKALDVSDHFPVEFKL 281 >gi|89070627|ref|ZP_01157907.1| exodeoxyribonuclease III, putative [Oceanicola granulosus HTCC2516] gi|89043774|gb|EAR49976.1| exodeoxyribonuclease III, putative [Oceanicola granulosus HTCC2516] Length = 262 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 28/305 (9%), Positives = 66/305 (21%), Gaps = 71/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 L +WNIN L+ + + D++ LQE S + Sbjct: 3 FTLATWNIN----------------SVRLRAPLVLRLLEEEAPDVLCLQECKSPVEKMPL 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 L + +A+ K ++ + Sbjct: 47 EGFA---------ALGYRHVVARGQRGYNGVAILSKTPIEEVAAHDYASLGHARH----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E V+ + D + + ++D E Sbjct: 93 --IAGRLENG-----VVVHNFYVPAGGDKPDREVNEKFGQKLDYLAAMRD--AFHAERPE 143 Query: 204 PFVIAGDFNRKINYLG--NNDDFWKTID-------------PNDSLIRFPKEKDSRCNAN 248 ++ GD N ++ + + + ++ Sbjct: 144 RSILVGDLNVAPREDDVWSHKQLLRVVSHTPVEVNHFTDAQEAGGWVDVTRQDIPSGRLY 203 Query: 249 KNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +D+ + ++ SDH P+ Sbjct: 204 SWWSYRSPDWQAADKGRRLDHVWASADIASAAHGS-------RVLRDVRGWEQPSDHVPV 256 Query: 299 SIDYD 303 +D Sbjct: 257 FASFD 261 >gi|221102296|ref|XP_002154797.1| PREDICTED: similar to CCR4-NOT transcription complex, subunit 6 [Hydra magnipapillata] Length = 516 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 37/349 (10%), Positives = 98/349 (28%), Gaps = 55/349 (15%) Query: 11 FFLVPCTASVAQKVRLVSWNINTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 + + ++ ++S+N+ + + + + +ADI Sbjct: 163 WISIEPASTENGSFIVMSYNVLSDKHTNRQLYGYCPQWALNWDYRKSAILKEILQFNADI 222 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH----TAIAVRKKNVRVL 124 + LQE+ + P+ + + +K + A+ + ++ Sbjct: 223 LSLQEVETEQYWNFFLPELKKNGYDGIFNPKSRAKTMPEEERRFVDGCAVFWQNTKFTLI 282 Query: 125 QQSY---------PLLGAKDSFSRAGNRRAVEL---------LVEINGKKIWVLDIHLKS 166 ++ GA D +R R + + + E++ K ++ + Sbjct: 283 KEHLVEFNQLAAAHAEGADDMVNRVMQRDNICVMALLEMIKPVPELDNIKPKIIVTNAHI 342 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----- 221 + + + L+ + +++ + + K VP +I D N I+ Sbjct: 343 HWDPEYRDVKVIQTLMLMRELKKFMDEITAEYKIEKVPNIICADMNSMIDSGAIEFLEHG 402 Query: 222 -----DDFWKTIDPNDSLIRFPKEKDSR-------------------CNANKNLRNKIPI 257 ++ + L R+ + N + Sbjct: 403 RIPVSHPDFQKLKYGGYLSRYADKDKKGLEIITHPFNLSRAGKKNPLPFTNFTYDFTGVL 462 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDI--KSRGKRLSDHCPISIDYDF 304 DY + ++ I SDH + +++DF Sbjct: 463 DYIFYTSDINLLGELGQIDSEYLKKNKIIGFPHPHFPSDHIYLVVEFDF 511 >gi|288928983|ref|ZP_06422829.1| AP endonuclease domain protein [Prevotella sp. oral taxon 317 str. F0108] gi|288329967|gb|EFC68552.1| AP endonuclease domain protein [Prevotella sp. oral taxon 317 str. F0108] Length = 362 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 77/309 (24%), Gaps = 70/309 (22%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + ++++S+N +R + Y K DADI+ LQE Sbjct: 93 NSNPTDSCLKVLSYN-----TFLWGGGEATEPQRWE-----MLNYVKEKDADILCLQEAN 142 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 I+ + I+ +A+ K V + ++D Sbjct: 143 LGGKFQATIDSLLNSIY-------PYHDIKEKTTIYDRLAIYSKYPIVRSERVMYPQSED 195 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHL------------------------KSFCFLD 171 + V + G + V++ H + Sbjct: 196 --------FSQACWVAMPGDTVLVVNNHFATTGLTEAQRQEFKSMLKGDLRTKQMPSLGK 247 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 SL + + + Q Q + ++ K ++ GDFN + Sbjct: 248 SLVHKLGEYAKIRAPQVQCVAQFVR--KRKGQSIILCGDFNDSPISYAHRCM------AK 299 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + + + ID + + Sbjct: 300 ELTDCYVASGNGPGISYHRNAFYVRIDNIMCSDDWQPLKCVVENKVKT------------ 347 Query: 292 LSDHCPISI 300 SDH PI Sbjct: 348 -SDHYPIFC 355 >gi|229095084|ref|ZP_04226080.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29] gi|229101186|ref|ZP_04231952.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28] gi|229114038|ref|ZP_04243464.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3] gi|228669497|gb|EEL24913.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3] gi|228682314|gb|EEL36425.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28] gi|228688414|gb|EEL42296.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29] Length = 263 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 76/269 (28%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 18 EKIKYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ + + ++ + KD+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHTIIKEDTFFISENKDTTYWK-TRKIVSATIAYNGKDITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFQGQVDRLMERVD----SNELSFLMGDFNNNARLQG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID V +Q+ + Sbjct: 183 EGYEYLMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLIVCNQSKRVRSSKVI 242 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ N +SDH + + D Sbjct: 243 FNGTNRNV---------ISDHFGVEVQLD 262 >gi|297205315|ref|ZP_06922711.1| exodeoxyribonuclease III [Lactobacillus jensenii JV-V16] gi|297149893|gb|EFH30190.1| exodeoxyribonuclease III [Lactobacillus jensenii JV-V16] Length = 299 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 81/303 (26%), Gaps = 56/303 (18%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L+SWNI++L+ + R + DI+ +QE Sbjct: 27 LISWNIDSLNAALTSDSARAQKTRH------VLTQIAEKKPDILAIQETKLRATGPTKKH 80 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + S + + KN +YP +GA D+ G Sbjct: 81 AEILAKLFPDYEYVWRSSEEPARKGYAGTMYLYKNTLEPVVTYPTIGAPDTMDFEGR--- 137 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++ + + +V ++ + + Q L + P Sbjct: 138 ---IITLEFPEYFVTQVYTPNAGGELKRLGDRQGWDKKYIEYLQKL--------DKEKPV 186 Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + +GD+N + + F K + Sbjct: 187 LASGDYNVAHEEIDLKHPENNHHSAGFTDEERADFTELLSTGFTDSFRKIHGNIPEVYSW 246 Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY++ + + ++ G+R DHCPI + Sbjct: 247 WAQRIKTAKANNSGWRIDYWLTSNRIADKIKKS----------EMMDTGERA-DHCPIVL 295 Query: 301 DYD 303 + D Sbjct: 296 EID 298 >gi|325694998|gb|EGD36902.1| exodeoxyribonuclease [Streptococcus sanguinis SK150] Length = 275 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 84/305 (27%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q + +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLS------QAVLQTLQAENADIIAIQETKLSATGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K ++P +GA + G Sbjct: 55 KHLEILTNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E +G +V ++ + + + ++ L + Sbjct: 114 ---IITLEFDG--FFVTQVYTPNAGDGLKRLDDRQVWDAKYAEYLGTL--------DKQK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F N Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 VMEIE 274 >gi|315605969|ref|ZP_07881000.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315312251|gb|EFU60337.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 776 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 37/344 (10%), Positives = 77/344 (22%), Gaps = 64/344 (18%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVS--LWKNSVKRTTS-------------------- 52 P ++ R+ ++N+ GV RT + Sbjct: 362 PSAPTLGGDTRVATFNVLNYFSDLGVDEAGCTGYPDRTGAFVTTKKCRVRGAYSREAFAN 421 Query: 53 DYTLLRQYAKNLDADIVFLQEMGSY----------NAVAKVFPKNTWCIFYSTERL--IN 100 + L A +V L+E+ + ++A++ + Sbjct: 422 QEAKIVSAINALGAHVVALEEIENPVGVGVGTDRDASLARLVSALNTAAGTAEWAYVPSP 481 Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 + I A + V + S + + V+ Sbjct: 482 PITPAGEDVIRVAFIYKPAIVTPVGDSLIHDDPAFAGLARQPLAQEFARTGASSSSFVVI 541 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK------DWITQKKESLVPFVIAGDFNRK 214 H KS + + A ++ + + P ++ GDFN Sbjct: 542 ANHFKSKGSVPDGAGEGNRDNGDGQGNANAIRVAQASALAAFAARFADKPTLLVGDFNSY 601 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 + + + + +D+ + A L + Sbjct: 602 SQEDPVRALTARG---------WERVSGQGEASYVYSGRSGSLDHVFANAAAKSLLAGVT 652 Query: 275 FSEILYNEDDIKSRG---------------KRLSDHCPISIDYD 303 + E R SDH P I Sbjct: 653 SWAVNAQESVAFEYSRAGMNAHLRIEADNPYRSSDHNPEIIGLT 696 >gi|150003564|ref|YP_001298308.1| hypothetical protein BVU_0993 [Bacteroides vulgatus ATCC 8482] gi|149931988|gb|ABR38686.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] Length = 359 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 40/336 (11%), Positives = 88/336 (26%), Gaps = 85/336 (25%) Query: 3 RKYVLALVFFLVPCTASV---------------AQKVRLVSWNINTLSEQEGVSLWKNSV 47 RKY L L F + C+ ++ +S+N + + + Sbjct: 66 RKYAL-LSFLGLVCSIGAIRTYFPVNVFVSDVPEGAIKFLSYNTMAFEKNRANTKDNPNP 124 Query: 48 KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107 + +Y +N +ADI+ LQE + K Sbjct: 125 ---------VLEYLRNSNADIICLQE--------YIVGGRLTKKEVDYALRDYPYKNYHK 167 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 + + + + ++ +++NG + +++ HL+S Sbjct: 168 ISGANGLGCYSRFPILSAHPVKYASLNN--------GSIAYKIKVNGDTLLIVNNHLESN 219 Query: 168 CFLDSLENTYS-----------------------PSCSLLSQQAQWLKDWITQKKESLVP 204 + + Y + ++ + QA + + K Sbjct: 220 KLTEKDKEVYREMMKDPDKQKVSQGSRLLIGKLAEASAIRAVQADSIARLVAGYKGGG-- 277 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 ++ GDFN + + ++ N ID ++ + Sbjct: 278 IIVCGDFNDSPISYT-HRVVGEGLNDAFVESGNGFGISYNQNHFYF-----RIDNILLSK 331 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 N + + SDH PI Sbjct: 332 NLKSYRCTV-------------DNTIKSSDHYPIWC 354 >gi|268608445|ref|ZP_06142172.1| exodeoxyribonuclease [Ruminococcus flavefaciens FD-1] Length = 248 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 69/303 (22%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + DADI +QE A Sbjct: 1 MKLISWNVNGFRACLTKGFG---------------DFFAEADADIFCIQETKMQPDQADF 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ F+S ++ AV K + D Sbjct: 46 SPEGYHKYFHSAI-----------KKGYSGTAVYTKKEPLSVTFGINGEHTDEGR----- 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + + ++ + + + L + Sbjct: 90 -----VITCEYEDFYFVGCYVPNAQNELKRIDYRMEFEDAMRGYLSEL--------DKKK 136 Query: 204 PFVIAGDFNRKINYLGNNDDFWKT----IDPNDSLIRFPKEKDSRCNA----------NK 249 P + GD N N + + + ++ Sbjct: 137 PVIYCGDLNVAHNEIDLKNPKSNVGNAGFSDEERGKFTELLAAGFSDSYRSLYPEKIEYS 196 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYFV+ + SDHCP+ + Sbjct: 197 WWSYRFKAREKNIGWRIDYFVVSDRFMPRVKDSQILT-----------DVTGSDHCPVQL 245 Query: 301 DYD 303 + Sbjct: 246 IIE 248 >gi|164660056|ref|XP_001731151.1| hypothetical protein MGL_1334 [Malassezia globosa CBS 7966] gi|159105051|gb|EDP43937.1| hypothetical protein MGL_1334 [Malassezia globosa CBS 7966] Length = 765 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 33/338 (9%), Positives = 85/338 (25%), Gaps = 57/338 (16%) Query: 21 AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + ++S+N+ + + + + Q + +A++ LQE+ Sbjct: 416 SNTFAVLSYNVLCEKYATAQMYGYTPSWALAWNYRKEFILQEIVSYNAEVYCLQEVEMGQ 475 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDI----HTAIAVRKKNVRVLQQSYPLLGAK 134 PK + + ++ +++ A + + ++ + Sbjct: 476 FNDYFEPKLKQHGYEGIFWPKSRARTMRDDERQHVDGCATFYKSDSFELVDKQLIEFNQI 535 Query: 135 DSFSRAGNR-------------RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 R A+ ++E ++ + + + Sbjct: 536 ALQRPDFKRTEDIFNRVMTKDNVALIAMLENRTSGYKLIVANAHM-HWDPEFRDVKLVQA 594 Query: 182 SLLSQQAQWLKDWITQKKES----------------LVPFVIAGDFNRKINY-------- 217 ++L +Q + + + +P ++ GDFN + Sbjct: 595 AMLLEQLEVTGNRFAKMLPQVKLTQGRQPPKYSSGMQIPTLVCGDFNSTPDSGVYEFMSK 654 Query: 218 ---LGNNDDFWKTI-----DPNDSLIRFPKEKDSRC----NANKNLRNKIPIDYFVM-DQ 264 GN++DF I + N + IDY Sbjct: 655 GSAPGNHEDFMNHIYGTYTSEGLKHNYAMRSAYGNVGELPFTNLTPGFQGVIDYIWYTSN 714 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + SDH I ++ Sbjct: 715 TLAASCLLGEVDRTYLSRVVGFPNAHFPSDHVCILAEF 752 >gi|99079894|ref|YP_612048.1| exodeoxyribonuclease III [Ruegeria sp. TM1040] gi|99036174|gb|ABF62786.1| exodeoxyribonuclease III [Ruegeria sp. TM1040] Length = 262 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 28/306 (9%), Positives = 67/306 (21%), Gaps = 71/306 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L +WNIN ++ + + D++ LQE S Sbjct: 2 SFTLATWNIN----------------SVRLREPIVVKLLEEEGPDVLCLQECKSPV---D 42 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 P + + + +A+ + + Sbjct: 43 KIPMEAFRALGYEHMI------ARGQKGYNGVAILSRLPIEDVGDKDFASLGHARH---- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V +E + + + ++ + D + + ++DW ++ Sbjct: 93 ---VAGRLENG---VTIHNFYVPAG--GDEPDREKNVKFGQKLDYLTEMRDWFHAERPEK 144 Query: 203 VPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247 V+ GD N D + ++ Sbjct: 145 S--VLVGDLNIAPREDDVWDHKKLLKVVSHTPIEVEHLDQVMDAGGWADVTRKDIPEGQL 202 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + ++ SDH P Sbjct: 203 YSWWSYRAKDWDAADKGRRLDHVWTTADITNAAHSS-------RILRHARGWEKPSDHAP 255 Query: 298 ISIDYD 303 + +D Sbjct: 256 VFATFD 261 >gi|320170015|gb|EFW46914.1| hypothetical protein CAOG_04872 [Capsaspora owczarzaki ATCC 30864] Length = 680 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 43/329 (13%), Positives = 93/329 (28%), Gaps = 61/329 (18%) Query: 11 FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 T S A +++VS+NI + + + S + ADIV Sbjct: 373 LTAAAPTRSSAAPLKVVSFNIWNANGRG--------EAKYNSRMDHIGSILHEAQADIVA 424 Query: 71 LQEMGSYNAVAKVFPKNTWC---------IFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 LQE+ +++ P ++ + +++ + +A+ + Sbjct: 425 LQEVRFDDSLVHSLPPANQASDLLRYLPGYQFAFQPAMSYPLDLTGRVEE-GLAIYSRYP 483 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + L + R +++ + + + S ++ S + Sbjct: 484 ILNTGYLLLPRIPEDPH---QRILFHAEIDVPSVGVVDVVVSHFSLV-----DSARSVAA 535 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225 + + L +S P + GD N D W Sbjct: 536 LRVYDFLRKLAR------DSPRPQLFMGDLNATPLSTAMQFLNGNVTLRNIRVGDMRDVW 589 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQES 274 + P S +K + + + IDY + Q A + Sbjct: 590 LALRPEPSYDPRTDDKLPHAPPSDHPLYGMTFNTHANFLSKRIDYMYLRQPAGSPSVLRP 649 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 S + + G+ SDH + ++D Sbjct: 650 RSIDVIGQH--PRDGQMPSDHVGLVAEFD 676 >gi|317401341|gb|EFV81978.1| endonuclease [Achromobacter xylosoxidans C54] Length = 262 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 37/270 (13%), Positives = 71/270 (26%), Gaps = 59/270 (21%) Query: 60 YAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + + AD++ LQE + + + + + +S Sbjct: 23 WMEKHAADVLCLQEIKVSDEDLTEDLRHPPGYTGHFHHAVKKGYSGVGIY---------- 72 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 +G R + + K + V+ +L S D + Sbjct: 73 ----LRDAAERVSIGLGCEEFDPEGRI-----IRADWKNLSVISAYLPSGSSGDERQQAK 123 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------LGNND 222 L + + K++ FVI GD+N L Sbjct: 124 YRFLDRFGPWIDEL---MHEHKKTGREFVICGDWNIAHKEIDLKNWKGNLKNSGFLPEER 180 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQE 273 + + + + D R + N+ IDY + Sbjct: 181 AWLTDVFDKRGFVDVFRTIDERPDQYTWWSNRGQAWAKNVGWRIDYQIATPGIAARARSV 240 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +R SDH P++IDYD Sbjct: 241 AI-----------YKDERFSDHAPLTIDYD 259 >gi|239947023|ref|ZP_04698776.1| exodeoxyribonuclease III [Rickettsia endosymbiont of Ixodes scapularis] gi|239921299|gb|EER21323.1| exodeoxyribonuclease III [Rickettsia endosymbiont of Ixodes scapularis] Length = 262 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 88/303 (29%), Gaps = 69/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V+WNIN + LLR + + DI+ LQE+ Sbjct: 1 MKIVTWNIN----------------SIKTRLNLLRNFLSKENPDILLLQEIKCETE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ + +A+ K + +++ R Sbjct: 41 ------KFPFDELSNLPYNFYVHGQKSYNGVAIISKFP----ADEIIKDFPNNYYSDQAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E+ + + ++ ++ + F+ S + + ++++ KK Sbjct: 91 F-LEIKLSLPIGFCNIISLYAPNGSFIGSDKFVAKLAF------YDNFINYLSTKKSFDE 143 Query: 204 PFVIAGDFNRKINYLGNNDDFW---------------KTIDPNDSLIRFPKEKDSRCNAN 248 +I GDFN + +TI + + S+ Sbjct: 144 KTIIGGDFNIAPFDIDVYSPKLLAETTCFTEIEQKKLRTILNSGFEDLYRLMHPSKQE-F 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID + N +L D ++ SDH P+ Sbjct: 203 SWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYM-------DYNLRTQEKPSDHIPVI 255 Query: 300 IDY 302 + Sbjct: 256 ASF 258 >gi|227530634|ref|ZP_03960683.1| exodeoxyribonuclease III [Lactobacillus vaginalis ATCC 49540] gi|227349415|gb|EEJ39706.1| exodeoxyribonuclease III [Lactobacillus vaginalis ATCC 49540] Length = 275 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 80/305 (26%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++++ + + R+ + D++ +QE Sbjct: 1 MKLISWNIDSINAALTGTSTRAEETRS------VLHKIAGKHPDVIAIQETKLSKNGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ S + + +YP +GA ++ G Sbjct: 55 KHLAVLQELFPDYQVAWRSSVEPARKGYAGTMYLYLKEYEPTVTYPQIGAPETMDDEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E +V +++ + + Q L Sbjct: 114 ---IITLEFPD--FFVTEVYTPNSGSGLKRLADRQVWDDCYREYLQKLDQ--------QK 160 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + +GDFN + + + F + A Sbjct: 161 PVIASGDFNVAHESIDLAHPENNHHSAGFTDEEREHFTKLLAAGFTDSFRHLNPEKTGAY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY+++ + + + DH PI Sbjct: 221 SWWAQRVITSKQNNSGWRIDYWLVSDRLADKIKNSTMIDSGERR-----------DHTPI 269 Query: 299 SIDYD 303 +D D Sbjct: 270 ELDID 274 >gi|121613613|ref|YP_999970.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 81-176] gi|121504268|gb|EAQ73304.2| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 81-176] Length = 259 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 78/304 (25%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + D + QE+ A Sbjct: 8 MKLLSWNVNGLRAICDKNA---------------LDWIAQEKIDFIGFQEI---KAHEDK 49 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FPK + + + + ++ + +++ + F R Sbjct: 50 FPKKIYEYPFKHMYFNSAKRA-----GYSGVMSLCNFDSEVKK-------CEFFDDEEGR 97 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++E K I + +I+ + + N + L Sbjct: 98 -----VLEHRFKNIALFNIYFPNGQKDEERLNFKMKFYADFLVYLDKLLK-------DGF 145 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GD N L + + + F + Sbjct: 146 EIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKY 205 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + L + ++ SDH P+ Sbjct: 206 SWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFIRDDIF-----------GSDHAPVG 254 Query: 300 IDYD 303 I+ D Sbjct: 255 IEID 258 >gi|315633964|ref|ZP_07889253.1| endonuclease/exonuclease/phosphatase [Aggregatibacter segnis ATCC 33393] gi|315477214|gb|EFU67957.1| endonuclease/exonuclease/phosphatase [Aggregatibacter segnis ATCC 33393] Length = 263 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 35/298 (11%), Positives = 87/298 (29%), Gaps = 54/298 (18%) Query: 24 VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNA 79 ++L++ N++ L + ++ DIV LQE+ S A Sbjct: 1 MKLLTLNVHAWLEDN------------QAEKIDIIADTIVEKGYDIVALQEVNQLMSAPA 48 Query: 80 VAKVFPKNTWCIFY---------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 +++ ++ + + L + + IA + ++ Sbjct: 49 ISQALKQDNYGVVLLNKINQRARQKYSLFWSNSHIGYDKYDEGIAFLTRLPVYEVDAF-Y 107 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 +R+ + L VE G+ + H+ Q Sbjct: 108 CSQHQRLDSILSRKILGLTVEYEGQLVDCYSCHINLPNCAGE-------------NQLDN 154 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC----- 245 + + + + + + ++ GDFN N K++ D+ ++ Sbjct: 155 ILNIVERSQSQNLK-ILMGDFNTDAISDPNAYQKIKSLGLLDTFEMAEQKDSGITVEKAI 213 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + K + +DY ++Q + + +SDH + ++ Sbjct: 214 DGWKGHSEEKRLDYIFLNQ---------TKRVLSSQVVFNGKNKPVVSDHFGLEVELT 262 >gi|260464102|ref|ZP_05812296.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum WSM2075] gi|259030087|gb|EEW31369.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum WSM2075] Length = 284 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 83/285 (29%), Gaps = 54/285 (18%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 T + + S+N++ + D + + +D D++ LQE + Sbjct: 31 TTGTTGTL-VASYNVHKCIGVDRKF-----------DPERTSRVIREIDPDVIALQEADN 78 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + S + H + + K+ V L G Sbjct: 79 RFGDRDGLLDLPRLERETGLVPVPISATGKGHGWHGNVLLFKRGVVRDVHQIKLPGL--- 135 Query: 137 FSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R AV +E++G + + V+ HL SQQA+ + D + Sbjct: 136 ----EPRGAVVAEIEMDGSQTLRVIAAHLGLLRHS-------------RSQQARVVLDLM 178 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 P ++ GD N + ++L + + + Sbjct: 179 N--SPDEKPTLLLGDLN---------EWRLGNRSALNTLHATFGPQPPAVPTFPSNLPLL 227 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +D + +++ I E + SDH P++ Sbjct: 228 ALDRIMTNRHGM----------IAAVEAHDTPLSRVASDHLPLTA 262 >gi|326789876|ref|YP_004307697.1| endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM 5427] gi|326540640|gb|ADZ82499.1| Endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM 5427] Length = 263 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 82/269 (30%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAK------------VFPKNTWCIFYSTERLI 99 L + K D D++ LQE+ + + V + + + ++ Sbjct: 18 DKINYLAKTIKENDYDVIALQEVSQHMLGKQFKGQLKTDNYVVVLQEALQKLGVNHYEVV 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + + K+ + ++S+ + KD+ + +RR V+ + G++I Sbjct: 78 WDFAHIGFQVYEEGLCLLSKHPIIEEESFFVSQTKDTLNWK-SRRIVKATINYKGEEIDC 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL + + A+ + + K + GDFN N Sbjct: 137 YSCHLGWWEDEEEP--------------AKLQLNKLNAKLHPKRRAFLLGDFNNNANVRD 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 D+ + D+ + + + K + +DY +Q Sbjct: 183 KGYDYMLGLGWKDTYMLAKDKDNGVTVQGKIHGWEENAGGLRLDYIFTNQK--------- 233 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 S +SDH + ++ + Sbjct: 234 VEVRSSKVIFNGSNKAVISDHHGVQVEIE 262 >gi|71004198|ref|XP_756765.1| hypothetical protein UM00618.1 [Ustilago maydis 521] gi|46095654|gb|EAK80887.1| hypothetical protein UM00618.1 [Ustilago maydis 521] Length = 663 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 46/321 (14%), Positives = 84/321 (26%), Gaps = 61/321 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ WNIN L +G W +L ADI QE M Sbjct: 1 MRITVWNINGLRTLKGYQPWYKLPDWE--------ACLDHLGADIACFQETKMTRKQLTE 52 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR------KKNVRVLQQSYPL-LGAK 134 + ++ F++ +S + +I ++ + + PL Sbjct: 53 PMCILPSYNAFFNFHPTKGYSGTVTYVRKSVSIPLKAEQGITGRLSVTNVSTNPLIPNDP 112 Query: 135 DSFSRAGNRRAVELLVE---INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 A R V+ + + +LD+ L + T Q L Sbjct: 113 IGCIPADTRDDVDAQIWNALDEEGRCVLLDLGLFVLFNVYCPNETGPERLEYKMTYYQCL 172 Query: 192 KDWITQKKESLVPFVIAGDFN--------------------RKINYLGNNDDFWKTIDPN 231 + + + +I GD N + F + P+ Sbjct: 173 AERAHRLIQEGRQVMIVGDMNIIRDPIDHCDAEQSIKEHGWDDFHQHPARSWFQSFLAPH 232 Query: 232 DSLIRFPKEKDSRCNANKNL----------RNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + + + +DY + + ++ +Y Sbjct: 233 GKFHDVGRMYHADRKKMFTCWNTLIDARPANYGVRLDYTLATEGILPWIKGADIQADVY- 291 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 SDHCPI ID Sbjct: 292 ----------GSDHCPIYIDL 302 >gi|148700527|gb|EDL32474.1| Traf and Tnf receptor associated protein, isoform CRA_d [Mus musculus] Length = 349 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 37/289 (12%), Positives = 77/289 (26%), Gaps = 48/289 (16%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + + ++WNI+ L + D+VFLQE+ Sbjct: 100 SSTISFITWNIDGLDGCN-----------LPERARGVCSCLALYSPDVVFLQEV------ 142 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +C + + TAI ++K V+ Q Sbjct: 143 -----IPPYCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNT-----K 192 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + + V + G + ++ HL+S + +Q + + + + Sbjct: 193 MMRNLLCVNVSLGGNEFCLMTSHLEST----------REHSAERIRQLKTVLGKMQE-AP 241 Query: 201 SLVPFVIAGDFNRKINY-----LGNNDDFWKTIDPNDSLIR-FPKEKDSRCNANKNLRNK 254 + AGD N + ++ F + + + N K Sbjct: 242 DSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTWDTKANNNLRIPAAYK 301 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + Q + + G+ SDH + + Sbjct: 302 HRFDRIFFRAEEGHLIPQS----LDLVGLEKLDCGRFPSDHWGLLCTLN 346 >gi|146305200|ref|YP_001185665.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp] gi|145573401|gb|ABP82933.1| Endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp] Length = 290 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 32/294 (10%), Positives = 77/294 (26%), Gaps = 62/294 (21%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 +RL+S+N+ + + + + + D D+V L Sbjct: 29 PSDGLLRLLSFNVQVGINTQRYHHYLTRSWQHLLPHAGRAGNLQRIGDLLA--DFDLVAL 86 Query: 72 QEMGSYNAVAKVFPKNTW---CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 QE+ + + + + + + + R + + Sbjct: 87 QEVDGGSLRSGYVNQVEYLAQQGAFPYWYQQLNRNLGRFAQHSNGVLSRLRPTLLEDHPL 146 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 P R A+ L + + V+ +HL ++Q Sbjct: 147 PGPPG---------RGAIFLQLGEGEHALCVVMMHLALG-------------ARTRTRQL 184 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I ++ V+ GD N + N L Sbjct: 185 A----YIRERVGEFRHLVLMGDMNTHAVD----------LLENSPLRDLGLIAPQAEATF 230 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + R + +D+ ++ + + +SDH P++++ Sbjct: 231 PSWRPQRCLDHILLSSELELGRVDV--------------LSQPISDHLPVAVEI 270 >gi|74198542|dbj|BAE39751.1| unnamed protein product [Mus musculus] Length = 326 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 37/289 (12%), Positives = 77/289 (26%), Gaps = 48/289 (16%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + + ++WNI+ L + D+VFLQE+ Sbjct: 77 SSTISFITWNIDGLDGCN-----------LPERARGVCSCLALYSPDVVFLQEV------ 119 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +C + + TAI ++K V+ Q Sbjct: 120 -----IPPYCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNT-----K 169 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + + V + G + ++ HL+S + +Q + + + + Sbjct: 170 MMRNLLCVNVSLGGNEFCLMTSHLEST----------REHSAERIRQLKTVLGKMQE-AP 218 Query: 201 SLVPFVIAGDFNRKINY-----LGNNDDFWKTIDPNDSLIR-FPKEKDSRCNANKNLRNK 254 + AGD N + ++ F + + + N K Sbjct: 219 DSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTWDTKANNNLRIPAAYK 278 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + Q + + G+ SDH + + Sbjct: 279 HRFDRIFFRAEEGHLIPQS----LDLVGLEKLDCGRFPSDHWGLLCTLN 323 >gi|9507213|ref|NP_062424.1| tyrosyl-DNA phosphodiesterase 2 [Mus musculus] gi|67462082|sp|Q9JJX7|TYDP2_MOUSE RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase; AltName: Full=TRAF and TNF receptor-associated protein gi|8247283|emb|CAB92971.1| putative TRAF and TNF receptor associated protein [Mus musculus] gi|56237843|emb|CAI26084.1| Traf and Tnf receptor associated protein [Mus musculus] gi|124376774|gb|AAI32512.1| TRAF and TNF receptor associated protein [Mus musculus] gi|124376776|gb|AAI32514.1| TRAF and TNF receptor associated protein [Mus musculus] gi|148700528|gb|EDL32475.1| Traf and Tnf receptor associated protein, isoform CRA_e [Mus musculus] Length = 370 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 37/289 (12%), Positives = 77/289 (26%), Gaps = 48/289 (16%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + + ++WNI+ L + D+VFLQE+ Sbjct: 121 SSTISFITWNIDGLDGCN-----------LPERARGVCSCLALYSPDVVFLQEV------ 163 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +C + + TAI ++K V+ Q Sbjct: 164 -----IPPYCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNT-----K 213 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + + V + G + ++ HL+S + +Q + + + + Sbjct: 214 MMRNLLCVNVSLGGNEFCLMTSHLEST----------REHSAERIRQLKTVLGKMQE-AP 262 Query: 201 SLVPFVIAGDFNRKINY-----LGNNDDFWKTIDPNDSLIR-FPKEKDSRCNANKNLRNK 254 + AGD N + ++ F + + + N K Sbjct: 263 DSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTWDTKANNNLRIPAAYK 322 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + Q + + G+ SDH + + Sbjct: 323 HRFDRIFFRAEEGHLIPQS----LDLVGLEKLDCGRFPSDHWGLLCTLN 367 >gi|302688375|ref|XP_003033867.1| hypothetical protein SCHCODRAFT_52565 [Schizophyllum commune H4-8] gi|300107562|gb|EFI98964.1| hypothetical protein SCHCODRAFT_52565 [Schizophyllum commune H4-8] Length = 625 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 35/320 (10%), Positives = 85/320 (26%), Gaps = 65/320 (20%) Query: 29 WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK------ 82 +N+ ++ + + Y L DI+F+QE+ + Sbjct: 312 YNVENMAPTSSHI---------PAVAEHIASYL--LSPDILFVQEIQDNSGPTDDGTVSA 360 Query: 83 ---VFPKNTW--------CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS---- 127 + F +I A R ++++ S Sbjct: 361 NVTLVTLANAIKNISGVVYDFVDIAPKDGEDGGQPGGNIRQAYLYRADKLQLVSGSPAGT 420 Query: 128 -------------------YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSF 167 P A + + +R+ + + NG ++ +++HL S Sbjct: 421 ALDAVEVQESSDGTPALNFNPGRIAPTNAAWDSSRKPLVAHWITPNGTSLFTINLHLTSK 480 Query: 168 CFLDSLENTYS----PSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNN 221 + + Q + + ++ + ++AGDFN Sbjct: 481 GGSSTTHANGRTPVNLGVEQRTSQVELVASFVGDILAVDPEANVIVAGDFNEYTQTRSVL 540 Query: 222 DDFWKTIDPNDS----LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 D + + +N +D+ + ++ Sbjct: 541 QALEDIGSGGDDGLIEIDEAAGLAEVERYTYVYDQNTQQLDHAFVSGAIAGRGVEVEHVH 600 Query: 278 ILYNEDDIKSRGKRLSDHCP 297 + + + + +R+SDH P Sbjct: 601 VN---NWVATYAERVSDHDP 617 >gi|224827230|ref|ZP_03700324.1| exodeoxyribonuclease III Xth [Lutiella nitroferrum 2002] gi|224600519|gb|EEG06708.1| exodeoxyribonuclease III Xth [Lutiella nitroferrum 2002] Length = 258 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 89/304 (29%), Gaps = 74/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+VS N+N + + + + AD+V +QE+ K Sbjct: 2 LRIVSANLNGVRSADKKGFF---------------DWLAGSQADLVCVQEL-------KA 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P + + + L + + ++ + + ++ G + A R Sbjct: 40 QPGDLSPRMQAPDGLTGY-FHCAEKKGYSGVGIYSRHEPDAVVE----GLGIGWIDAEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++++ ++ V+ ++L S D + + L+ + Sbjct: 95 Y-----LQLDFGELSVVSLYLPSGSSSDERQQVKFDFLDVFMPHLNELRA-------AGR 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKT---------------IDPNDSLIRFPKEKDSRCNAN 248 VI GD+N N + + + + Sbjct: 143 DIVICGDWNIAHNEIDLKNWKGNLKNSGFLPEERAWMGELLGEGGWHDVWRRLYPEVPGY 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY ++ + + S + ++ SDH P+ Sbjct: 203 TWWSNRGQAYAKDVGWRIDYHIVTPSMMECARAASV-----------YKDEKFSDHAPLI 251 Query: 300 IDYD 303 +DYD Sbjct: 252 VDYD 255 >gi|120402563|ref|YP_952392.1| exodeoxyribonuclease III Xth [Mycobacterium vanbaalenii PYR-1] gi|119955381|gb|ABM12386.1| exodeoxyribonuclease III Xth [Mycobacterium vanbaalenii PYR-1] Length = 270 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 33/278 (11%), Positives = 81/278 (29%), Gaps = 50/278 (17%) Query: 47 VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 +R+ + LL + K +D+V LQE A + + + L + Sbjct: 16 KQRSVENLGLLA-WFKETASDVVCLQE---TRADDEQLGEALAPVLADGWHLAS---AAP 68 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 + +AV ++ + +G A R +E++ + V +++ + Sbjct: 69 HVKGRNGVAVLSRSPFDDVR----IGCGAEEFAAHGRY-----IEVDTAGVTVGSVYVPT 119 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--- 223 + + ++ + L + + E V++GD+N + Sbjct: 120 GEAETDRQLEKERFMAAVAARMAVL---LARSVEDGRHAVLSGDWNIAHTENDIKNWKGN 176 Query: 224 ------------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVM 262 + + + + + IDY + Sbjct: 177 VKKAGFLPQERQWLTELLGTGWVDVVRQAHPDVAGPYAWWSWRGKAFDNDAGWRIDYQLA 236 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + + + R SDHCP+++ Sbjct: 237 TPGLAGRVAAVT-------TERPAAYALRWSDHCPVTV 267 >gi|315657850|ref|ZP_07910730.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491647|gb|EFU81258.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 286 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 83/312 (26%), Gaps = 58/312 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +R+ +WN+N + + + + + D++ +QE+ + Sbjct: 1 MRIATWNVN----------------SIRTRVNRVTAFLERENIDVLAMQEIKCRNDQFPT 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 F + +F + N + I + + + Q P + Sbjct: 45 LAFETAGYQVFVNGLNQWNGVAVAARQGISAHLLGTEFYGSIDQ---PYFSVPPKPPQLE 101 Query: 142 NRRAVELLVEINGKKIWVLDI----HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R + + ++V + HL L L++ S L + L ++ Sbjct: 102 PRVLGVRVAGVECWSLYVPNGREVGHLHYQYKLKWLDSLRSHVIRTLDTDPESLGLYLGD 161 Query: 198 K--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF---------------PKE 240 DF + + + D++ + Sbjct: 162 FNVAPRDEDVWDMADFAGATHVSEPERQVFAKLLDPDTVADAVTLHDDLIEGLPGNLTEI 221 Query: 241 KDSRCNANKNLRN---KIP------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + ID+ + + D + G++ Sbjct: 222 TRKFAPGWTYWDYQRARWRRNQGMKIDFALATPRLASRVTGAYI-------DTAERDGEQ 274 Query: 292 LSDHCPISIDYD 303 SDH P+ +D++ Sbjct: 275 PSDHAPVIVDFE 286 >gi|312384628|gb|EFR29312.1| hypothetical protein AND_01852 [Anopheles darlingi] Length = 499 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 38/326 (11%), Positives = 76/326 (23%), Gaps = 68/326 (20%) Query: 36 EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST 95 +G L + D DI+ LQE+ + + K+ + + Sbjct: 159 HNDGFVRCPLEALTWDCRRYQLVEEIIQNDPDIICLQEVDHFKFLQKILATQNYEGVFFP 218 Query: 96 ERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 + +N A+ RK + ++ +L S A+ ++ Sbjct: 219 KPDSPCLYINGNNGPDGCAVFYRKDRLEMVNHFTRVLEVWRVQSNQ---VAIAAVLRTRD 275 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 + + +L L ++Q + L +I P ++ GDFN + Sbjct: 276 TQQELCVTTTHLKARKGALL------SKLRNEQGKDLLHFIDG-IAQNRPVILCGDFNAE 328 Query: 215 INYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDSRCN 246 + + + CN Sbjct: 329 PIEPIYSTVLNYRPLGLASAYADLLASEAHDENNQNAANAGRGAVRADRVSSRSSIGSCN 388 Query: 247 A-----------------------NKNLRNKI------PIDYFVMDQNAYKFLIQESFSE 277 + + IDY Q+ F Sbjct: 389 GEECGQANGGARTRAEESAAHEPAYTTWKIREEGEVCHTIDYVFYSQDKLTVRNCLMFPS 448 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 D + SDH + D + Sbjct: 449 GEEIGADRTPSFQYPSDHFSLVCDIE 474 >gi|121705342|ref|XP_001270934.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus clavatus NRRL 1] gi|119399080|gb|EAW09508.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus clavatus NRRL 1] Length = 604 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 47/346 (13%), Positives = 87/346 (25%), Gaps = 74/346 (21%) Query: 6 VLALVFFLVPCTASVAQKV---------RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 + AL T++ A + S+NI+ S T++ Sbjct: 270 LTALSVTGSNSTSAAATNLVSDGTCSAVTFGSYNIDNFSS-------------TSATLPK 316 Query: 57 LRQYAKNL--DADIVFLQEMGSYNAVAK-----------------VFPKNTWCIFYSTER 97 + Q+ IVFLQE+ + F Sbjct: 317 VAQHIAQYLKSPTIVFLQEIQDDDGPTDDGVVSANQTLASLAQSIADQGGINYNFVDINP 376 Query: 98 LINHSKRDSNNDIHTAIAVRKKNVRV------------------LQQSYPLLGAKDSFSR 139 + + +I A VR+ + P A + Sbjct: 377 IDDQDGGQPGGNIRVAYLYDPSVVRLHNPNPGSSTDANEVLPGAELKYNPGRIAPADAAW 436 Query: 140 AGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKD 193 R+ + E K + +++H S +E P S + QA+ + Sbjct: 437 DHCRKPLAAAWETLDGKNKFFTINVHFTSKLGGSPIEGDARPPVNGDVSTRAAQAEVVAA 496 Query: 194 WITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 + + ++S + AGDFN L + Sbjct: 497 FTSSILAQDSKAKILTAGDFNEFAFAQPLESFVAD--SGLQDLDVVAGVASTERYTYLYD 554 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N +D+ + + + S + SDH P Sbjct: 555 LNCQQLDHMFISPAL-----AAGAKMHHLHLNTWVSSSDQASDHDP 595 >gi|322517552|ref|ZP_08070421.1| RgfB protein [Streptococcus vestibularis ATCC 49124] gi|322123812|gb|EFX95386.1| RgfB protein [Streptococcus vestibularis ATCC 49124] Length = 271 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 39/284 (13%), Positives = 75/284 (26%), Gaps = 54/284 (19%) Query: 48 KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST------------ 95 + + L++ DI+ QE+ A V + S Sbjct: 14 EDAEGKFQTLKEQILKAQYDIICFQEVNQEIETAAVETDAYYHALPSATPIHQDHFVRLL 73 Query: 96 ----------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + ++ +AV + + L+ D + RR Sbjct: 74 VEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTSSE--ILVSDVDDPTDYHTRRV 131 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++G+++ V +HL + E C + P Sbjct: 132 AVAETTVDGREVAVASVHLSWWDKGFQEEWARIEGC----------------FQSIGKPL 175 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYF 260 ++AGDFN G + DS + S + K + IDY Sbjct: 176 ILAGDFNNPAGREGYQAILASPLKLQDSFQVAQETNGSYTVGPGIDGWKGNEEPLRIDYV 235 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 Q ++ + + +SDH + + F Sbjct: 236 FASQE---------WAVNHLSVIFDGNNQPLVSDHYGLEAELTF 270 >gi|220915579|ref|YP_002490883.1| exodeoxyribonuclease III Xth [Anaeromyxobacter dehalogenans 2CP-1] gi|219953433|gb|ACL63817.1| exodeoxyribonuclease III Xth [Anaeromyxobacter dehalogenans 2CP-1] Length = 264 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 33/303 (10%), Positives = 77/303 (25%), Gaps = 80/303 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N + + ++ D+V LQE+ + + Sbjct: 1 MKIGTWNVNG----------------IRAREAQVGEFIAREGPDVVCLQEIKAPPS---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S L + ++ +A+ + ++ + D +R Sbjct: 41 ------KVPPSLCELEGYWCLWHGETAYSGVALLVRKAIAPERPAFVHPPFDLETR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 E+ G + V I++ + + + + ++ + + S Sbjct: 91 ---IATCELGG--VTVASIYVPNGG----------KDLAAKLRFLEAMERFAADAQASGR 135 Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GD N L ++ I + + Sbjct: 136 RLVLCGDLNVARTDLDVHPKERKAGAIGQLPEERALFERILSRGLVDVGRALDPANEGLF 195 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDY S S SDH P+ Sbjct: 196 TWWAPWRNLRQRNIGWRIDYV-----------LASASLAASATRCRVLADFGTSDHAPVV 244 Query: 300 IDY 302 ++ Sbjct: 245 AEF 247 >gi|150396093|ref|YP_001326560.1| endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419] gi|150027608|gb|ABR59725.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419] Length = 287 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 38/283 (13%), Positives = 80/283 (28%), Gaps = 53/283 (18%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAV 80 + + S+NI+ +G D + + Q + ADIV LQE Sbjct: 33 GDIVIASYNIHKCVGTDGRF-----------DPSRIAQVIAEIGADIVALQEADQRFGER 81 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 A + + + + H + + ++ + L G Sbjct: 82 AGLLDLEHLRREAHLVSVPISPFTEKGHGWHGNVLLIREGAVSHVRQLKLPG-------V 134 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R A+ + +++ + V+ HL ++QA+ L Sbjct: 135 EPRGALVVDLDLKAGPLRVIAAHLGLLRHS-------------RARQAEMLLK--ASADG 179 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 + P ++ GD N + L + + + +P+D Sbjct: 180 AGRPTLLIGDLN---------EWRMGKRSSLSFLSPMFDPSHAAVASFPSRFPLLPLDRV 230 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + + E + SDH P+ D Sbjct: 231 LGNPHHLVTSV----------EVHDSPLARVASDHLPVKASID 263 >gi|320547311|ref|ZP_08041602.1| exodeoxyribonuclease [Streptococcus equinus ATCC 9812] gi|320448009|gb|EFW88761.1| exodeoxyribonuclease [Streptococcus equinus ATCC 9812] Length = 275 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 80/305 (26%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + R + DADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAVLSR------AVIDTLVAEDADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ ++ S + + KN S+P +GA D+ G Sbjct: 55 KHLQILEDYFPDYQVSWRSSVEPARKGYAGTMFLYKNHLTPTISFPEIGAPDTMDYEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V ++ + + L Sbjct: 114 -----IITLEFDNFYVTQVYTPNAGDGLKRLTERQIWDEKYADYLAELDQ--------TK 160 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N N + + F N Sbjct: 161 PVLATGDYNVAHNEIDLANPNSNRRSAGFTDEERAGFTNLLAKGFTDTFRYLHGDIPNVY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 SWWAQRSKTSKINNTGWRIDYWLASNRIADKITKSEMIDSGTRQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 VLEID 274 >gi|307353485|ref|YP_003894536.1| exodeoxyribonuclease III [Methanoplanus petrolearius DSM 11571] gi|307156718|gb|ADN36098.1| exodeoxyribonuclease III [Methanoplanus petrolearius DSM 11571] Length = 254 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 71/306 (23%), Gaps = 81/306 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N L E + DI+ +QE ++ Sbjct: 1 MKLVSWNVNGLRAVEKKGF---------------LDFVNEYQPDILCVQETKAHED---- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSN--NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + S + S+ ++ A+ + + DS R Sbjct: 42 ------QLSSSIRHPKGYFSYFSSAERKGYSGTALYSRFEPESISYGFGVPELDSEGRI- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + DI+ + + +S Sbjct: 95 --------IIAEYSDFNLYDIYFPNG-------KMSKERLQFKMDFYEECLRHAVSDLDS 139 Query: 202 LVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245 +I GD N + + +D + S Sbjct: 140 GKNVIICGDVNTAHKEIDLARPKENSKVSGFLEIERKWIDRLLDAG--FKDSFRMFTSEG 197 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 K IDYF + + S + SDHC Sbjct: 198 GYYSWWDLKSGARERNVGWRIDYFFVSDGISGRVKSASILSQV-----------EGSDHC 246 Query: 297 PISIDY 302 P+ ++ Sbjct: 247 PVELEL 252 >gi|227496831|ref|ZP_03927099.1| exonuclease III [Actinomyces urogenitalis DSM 15434] gi|226833664|gb|EEH66047.1| exonuclease III [Actinomyces urogenitalis DSM 15434] Length = 283 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 36/322 (11%), Positives = 83/322 (25%), Gaps = 81/322 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N + + + + D++ +QE+ Sbjct: 1 MRLATWNVN----------------SIRTRVDRVMAFLDRENIDVLAMQEIKCK------ 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A+ + ++ + G Sbjct: 39 ----PEQFPREPFEAAGYELAVHGLNQWNGVAIASRVGLTDVETSFPGQPTWESASLGGA 94 Query: 144 R--AVELLVEINGKK------------------IWVLDIHLKSFCFLDSLENTYSPSCSL 183 A L V + G+ + + +++ + L TY Sbjct: 95 VVEARALGVTVGGQPAGSTPPPAPDAAAPACAPVRLWSLYVPNGRELTHPHYTYKLD--- 151 Query: 184 LSQQAQWLKDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRF 237 + L++ + ++ +P + GD+N D + + Sbjct: 152 ---WLRTLREDVAAWLSEDPGLPLALVGDWNVAPRDEDVWDMVAFEGATHVSSPERAAFV 208 Query: 238 PKE-------KDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYN 281 E SR + ID+ + + Sbjct: 209 AFEQVGMEEVTRSRVTNYTYWDYQKLRFPRNEGMRIDFVYASAALAARVRDAAI------ 262 Query: 282 EDDIKSRGKRLSDHCPISIDYD 303 D + +GK SDH P+ ++ D Sbjct: 263 -DRDERKGKGASDHVPVIVEID 283 >gi|156397458|ref|XP_001637908.1| predicted protein [Nematostella vectensis] gi|156225024|gb|EDO45845.1| predicted protein [Nematostella vectensis] Length = 563 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 36/325 (11%), Positives = 86/325 (26%), Gaps = 46/325 (14%) Query: 24 VRLVSWNI-------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R VS+NI + +L + +ADI+ LQE G Sbjct: 235 IRCVSYNILADAYAREEFALNVLYPYCPPYALDIGYRKQVLMKELIGYNADIICLQECGQ 294 Query: 77 YNAVAKVFPKNTWCIFYSTERLIN---HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + P + + + ++ +V + + L Sbjct: 295 KLFDGFLLPCMELEGYQGIIKCKAGEIPEGEAIFFNRDKFELIKTCDVVLRESLLSHLSQ 354 Query: 134 KDSFSRAGNRRAV------------ELLVE---INGKKIWVLDIHLKSFCFLDSLENTYS 178 ++ A+ +++ N + ++ + S Sbjct: 355 EEILQHISPIPALFESLIKRNAIAQVAVLKCKGNNDNSPLICVVNTHLYYRPHSPHIRML 414 Query: 179 PSCSLLSQQAQWLKDWITQKKES-LVPFVIAGDFNRKINY------------LGNNDDF- 224 + +L+ + + +++ ++ V + GDFN + ++D Sbjct: 415 QAAIILNHTKAVVHELTSERDDNIDVAVLFCGDFNSTPHTGLFQLLTKGHVARTHHDWLV 474 Query: 225 WKTIDPNDSLIRFPKEK------DSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSE 277 + +D + + + + N K +DY + + E Sbjct: 475 HEDVDQHCNTLDLSHGFSFVNACGTPLFTNYTHGFKDTLDYIFCDSKFFEVQSVVPLPEE 534 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302 SDH + D Sbjct: 535 EELRNHLALPSVVMPSDHLALVCDL 559 >gi|150399093|ref|YP_001322860.1| exodeoxyribonuclease III Xth [Methanococcus vannielii SB] gi|150011796|gb|ABR54248.1| exodeoxyribonuclease III Xth [Methanococcus vannielii SB] Length = 257 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 30/303 (9%), Positives = 77/303 (25%), Gaps = 77/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++SWN+N + + + + +I+ +QE Sbjct: 9 MKMISWNVNGIRACLKNGFM---------------DFLNSKNPEIICIQETKVQKG-QVQ 52 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 N + +++ + + A+ K + G + S R Sbjct: 53 LGLNGYFEYWNYAEKKGY----------SGTAIFTKIEPKSVK----YGITNYKSDKEGR 98 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++ ++++++ + + L+ Sbjct: 99 -----VITLEFEEYFLVNVYTPNSQRGLKRLECRQKWDKDFLNHLKTLEQ--------KK 145 Query: 204 PFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCN-------ANK 249 P + GD N + + + + N Sbjct: 146 PVIFCGDLNVAHKEIDLKNPKQNIKNAGFTKEERNGFDNLINSGFLDTFRELNNEPENYT 205 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF + + + L + SDHCP+ I Sbjct: 206 WWSYRFNAREKNIGWRIDYFCISKKLRERLKDAFIMSEVL-----------GSDHCPVGI 254 Query: 301 DYD 303 + Sbjct: 255 IIE 257 >gi|51473457|ref|YP_067214.1| exonuclease III [Rickettsia typhi str. Wilmington] gi|51459769|gb|AAU03732.1| E.coli exonuclease III [Rickettsia typhi str. Wilmington] Length = 261 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 41/307 (13%), Positives = 76/307 (24%), Gaps = 72/307 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V+WNIN+L LLR+ A DI+ LQE N++ Sbjct: 1 MKIVTWNINSL----------------RLRIELLRKLAYEYQPDIILLQETKVANSL--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + S + +A+ K S L R Sbjct: 42 ------FPLEVIKNIGYEHVIYSGQKSYNGVAIISKLPLNNVFSLELYNDDK-------R 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V D + + + + +K+W T + Sbjct: 89 HIAAIVHGLEIHNFYV-------PAGGDIPDIEVNLKFKHKLEYVRLMKEWFTTNRTKND 141 Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 +I GD N + + + + Sbjct: 142 KIIIVGDLNIAPHEHDVWSSKQMRNVISHTDIERSLLVELQNSLGFIDSNRYFISLDKKC 201 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + N L N R SDH P Sbjct: 202 YTWWSYRNVDWKKSNRGRRLDHIWVSDNLKDAL-------FSMNVLSEARDWLRPSDHVP 254 Query: 298 ISIDYDF 304 + F Sbjct: 255 YFVTLHF 261 >gi|159045536|ref|YP_001534330.1| hypothetical protein Dshi_2996 [Dinoroseobacter shibae DFL 12] gi|157913296|gb|ABV94729.1| hypothetical protein Dshi_2996 [Dinoroseobacter shibae DFL 12] Length = 302 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 44/291 (15%), Positives = 85/291 (29%), Gaps = 39/291 (13%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +RL S+N++ + W S L K L+AD+V QEM S+ + Sbjct: 38 GALRLASYNVHYIVLGRAEGAW--SRGDWERRKGPLNAAFKALEADLVGFQEMESFLRGS 95 Query: 82 KVFPKNTWCIFYSTERL--INHSKRDSNNDIHTAIAVRKKNVRVLQQ------SYPLLGA 133 + H + I R + L++ P + Sbjct: 96 DGSVNLARDWLLAQNPGFAATHHGDWRDTPQTQPIFYRADRLEALEEGWFFFADTPDVIY 155 Query: 134 KDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 +F+ + A + G+ V+++H + S S A + Sbjct: 156 APTFNGSFPAFASWARFRDRVTGRVFRVVNVHFEF------------RSISNRRLSAALV 203 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 D + V+ GD N ++ + ++ F + + N+ L Sbjct: 204 ADRFAPALAAGERVVLLGDINARLGSATHG-----ILEDAG--WTFLPVAGATYHFNRGL 256 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ + + G+ +DH P+ D Sbjct: 257 NLFGAIDHI----ALAGPMDAAGPPV----VLRTRFPGEWPTDHYPVVADI 299 >gi|325285209|ref|YP_004260999.1| exodeoxyribonuclease III Xth [Cellulophaga lytica DSM 7489] gi|324320663|gb|ADY28128.1| exodeoxyribonuclease III Xth [Cellulophaga lytica DSM 7489] Length = 254 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 86/303 (28%), Gaps = 75/303 (24%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 +VSWN+N + +++ K ++ DI+ +QE + + Sbjct: 3 IVSWNVNGVRAVVKKEFFES---------------VKYMNPDILCIQETKAQD------- 40 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 N S + + +N ++ A + ++ + A D+ R Sbjct: 41 -NEVAKALSPLENFSLASNSANKKGYSGTATLSSTKPLTIKADIGIEAHDTEGR------ 93 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++ + +++++++ + + L+ P Sbjct: 94 ---VLCTEYENFYLVNVYVPNSGQKLDRLEYRKQWDKDFLDYLKNLEK--------KKPV 142 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNANKN 250 + GDFN + +D D + + Sbjct: 143 IACGDFNVAHKAIDLKNDKSNYNKTAGYTQTEIDGMNNFIADGFVDSFRMLHPDEVVYTF 202 Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + IDYF++ Q+ + + + SDHCPI + Sbjct: 203 WSYRFKSRERNTGWRIDYFLVSQSIKDKVKEVTV-----------FSDIMGSDHCPIGLK 251 Query: 302 YDF 304 DF Sbjct: 252 IDF 254 >gi|291513563|emb|CBK62773.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301] Length = 406 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 86/303 (28%), Gaps = 41/303 (13%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNAV 80 V + ++N+ W + + D DI+ +QE Sbjct: 121 TVSVETYNLLGADITTKGPSWAERKS-------HVGDIIRQSGNDPDILGVQECSIAAQK 173 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 A + YS S ++ V +L YP K + Sbjct: 174 ADMKAMLGDLYDYSENEKPTSSPGLIFWKKGAFELEEREIVDLLNGKYPNTYEKQRYGHF 233 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 V L +G I V +HL++ + + + +L A+ + E Sbjct: 234 -----VRLKHLASGSSILVYSVHLRAGSDVATADLRKEMIDNLCPLAAR-------KSAE 281 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFW-KTIDPNDSLIRFPKEKDSRCNANKNLRNKI---- 255 + P ++ GD N N L + + L F + + + Sbjct: 282 TGCPVIVLGDMNCTPNRLIGGIPSSPQVYKSHGFLDTFTQTRQRTNENYATYSSSAAVVE 341 Query: 256 ------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISID 301 IDY + + + + ED ++ + SDH P+ + Sbjct: 342 ECRVEVGENGSRRIDYIFTYPESRV-TTTRYATVLNFAEDGTANKLRSPLPSDHHPVRAE 400 Query: 302 YDF 304 +F Sbjct: 401 LNF 403 >gi|257068283|ref|YP_003154538.1| metal-dependent hydrolase [Brachybacterium faecium DSM 4810] gi|256559101|gb|ACU84948.1| metal-dependent hydrolase [Brachybacterium faecium DSM 4810] Length = 316 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 31/229 (13%), Positives = 64/229 (27%), Gaps = 36/229 (15%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------GS 76 R+ ++NI + D L LDAD++ LQE+ Sbjct: 5 RVATFNIRHGLGPD-----------ERVDLPRLAGQIAALDADVIGLQEVDVRFGDRSDH 53 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + A++ + + + + + +A+ ++ + QQ + L Sbjct: 54 ADQAARLGELLGMQVRFGAALDLPPEAPGAPRRQY-GLALLTRHEILTQQMHLLPDHPAG 112 Query: 137 FSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R + + G+++ VL HL + + Q Q + Sbjct: 113 PPSREPRGVLHARLRHRGGEELDVLVTHL------------DDAAREHRTAQVQGILRLA 160 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 Q P V+ GD N + + + Sbjct: 161 EQIPG---PAVLLGDMNADPSAPELAALSATGWRDAAQHVGLDAAQHVG 206 >gi|269123760|ref|YP_003306337.1| Endonuclease/exonuclease/phosphatase [Streptobacillus moniliformis DSM 12112] gi|268315086|gb|ACZ01460.1| Endonuclease/exonuclease/phosphatase [Streptobacillus moniliformis DSM 12112] Length = 277 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 93/309 (30%), Gaps = 47/309 (15%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M R + L F + A+ + + S+N L E D+ L + Sbjct: 1 MRR--IFKLFFLIFLSMNIWAEPILIASFNTLKLGEN-------------KKDWKSLAKI 45 Query: 61 AKNLDADIVFLQEMGSYNAVAKV------FPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 DI+ +QE+ + + + F W S + H + Sbjct: 46 VSKF--DIIAMQEVMNEKGINNLRNEVEKFTNEKWGYIISDMAVGTKDY-----KEHYGV 98 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 R+K V ++ + KD S+ R +L+ N ++ H E Sbjct: 99 LFRRKKVDSIKS---MGIYKDGKSKDFIRDPFGVLIRSNNFDFVLISAHSIFGKNKVERE 155 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 S + K ++ GDFN N +K ++ Sbjct: 156 IEASRYHKVYKYFMD---------KSKEEDVILLGDFNLPANSK-----AFKYFKDTYNV 201 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 ++ + D ++N K + Y +D+ + K +SD Sbjct: 202 KEVFNSIKNKT-TMSSKGLANSYDNAFFNRNNLKEYTGR-YGVYDYTKDNHEQIRKYISD 259 Query: 295 HCPISIDYD 303 H I ++++ Sbjct: 260 HLIIFMEFE 268 >gi|254780995|ref|YP_003065408.1| Endonuclease/exonuclease/phosphatase [Candidatus Liberibacter asiaticus str. psy62] gi|254040672|gb|ACT57468.1| Endonuclease/exonuclease/phosphatase [Candidatus Liberibacter asiaticus str. psy62] Length = 125 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 66/121 (54%), Positives = 90/121 (74%), Gaps = 2/121 (1%) Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 LSQQ +WLK W QK ++ +PFVIAGDFNRKIN +G+ DDFW+ +DP+ LIRFP+EK+S Sbjct: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 CN RNK +DYFV+D++ FLI SFS + Y++ D+ +R +LS HCP++I+YD Sbjct: 62 TCN--VIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYD 119 Query: 304 F 304 F Sbjct: 120 F 120 >gi|327462087|gb|EGF08416.1| exodeoxyribonuclease [Streptococcus sanguinis SK1057] Length = 322 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 38/325 (11%), Positives = 87/325 (26%), Gaps = 56/325 (17%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 K L V ++L+SWNI++L+ + + + Q + Sbjct: 28 KSALNFVIINSVNFTRKGNFMKLISWNIDSLNAALTSDSARAQLS------QAVLQTLQA 81 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 +ADI+ +QE + S ++ + K Sbjct: 82 ENADIIAIQETKLSATGPTKKHLEILTNLFPDYENTWRSSQEPARKGYAGTMFLYKKELT 141 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 ++P +GA + G + +E +G +V ++ + + + Sbjct: 142 PTVTFPEIGAPSTMDVEGR----IITLEFDG--FFVTQVYTPNAGDGLKRLDDRQVWDAK 195 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWKTI 228 ++ L + P + GD+N R + + + Sbjct: 196 YAEYLATL--------DGQKPVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNL 247 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEI 278 F + + IDY++ + + + Sbjct: 248 LAKGFTDTFRHLHGDIPDQYTWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDS 307 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303 + DH PI ++ + Sbjct: 308 GARQ-----------DHTPIVMEIE 321 >gi|320162722|gb|EFW39621.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 517 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 35/325 (10%), Positives = 85/325 (26%), Gaps = 71/325 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ S+NI E + + + AD + LQE+ + Sbjct: 214 IRVASFNIRNFVEP------------WEIRKAAIARQLRATHADFIGLQELRVLPDQSMG 261 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + +I + + K+ +S + S R Sbjct: 262 QLEQLAQLLPEYRFTHFQAAQTLSGEIIEGLGILSKHPLEHIESLAINPHPQLSSDTNAR 321 Query: 144 RAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT-QKKES 201 + + ++I ++ V HL +Q + W+ + + Sbjct: 322 VCLRVDLDIPKLGRVEVFVAHLSF-------------DAGEQCRQIAQVSHWMESTWQST 368 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---------- 251 ++ GDFN ++ + D + P + + + Sbjct: 369 RASQILLGDFNVYFDFEWSIDPLTARSRDAKDFLASPLNPCAAAYSQQFPFHLPEHSFID 428 Query: 252 --------------------RNKI----------PIDYFVMDQNAYKFLIQESFSEILYN 281 D ++ + F + ++ Sbjct: 429 AWLSFVAQLDRRESRDNPGITYPAMHNIATADSCRPDRILLRSDTLHVHHARRFGFLPFD 488 Query: 282 EDDI----KSRGKRLSDHCPISIDY 302 +D G SDH + +D+ Sbjct: 489 DDGTELPPGRSGFFASDHLGVLVDF 513 >gi|167523032|ref|XP_001745853.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775654|gb|EDQ89277.1| predicted protein [Monosiga brevicollis MX1] Length = 513 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 43/339 (12%), Positives = 99/339 (29%), Gaps = 53/339 (15%) Query: 11 FFLVPCTASVAQKV---RLVS--WNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 + ++ + S +NI + ++ + + + Sbjct: 174 WIFPATMPQDMGELPKDTVTSFCYNILCEKYATRQVYRYCPSWALEWNYRKQQILKDILQ 233 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--AIAVRKKNV 121 +DI+ LQE+ S + K + + + S+ D T A+ Sbjct: 234 YSSDIICLQEVASGQFYSYFQHKLRERDYQGLYHPKSRVRTMSDADRQTVDGCAIFFHVS 293 Query: 122 RVLQQSYPLLGAKDSFSRAGN-------------RRAVELLVE--INGKKIWVLDIHLKS 166 + + + S +R + A+ L+E G+K +V ++HL Sbjct: 294 KFKLVKEHCIEFERSATRYASGCADMLNRVMIKDNIALCALLERQSTGEKFFVCNLHLTW 353 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------ 220 ++ + + +++++ + +P +I GDFN + Sbjct: 354 DPKFRDVKVIQTVLA------LREIENFLKEHNCPNIPVMIMGDFNSMHDSGVYELMENG 407 Query: 221 ---------------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 F +++ + +L + +N IDY Sbjct: 408 KYCVQPLMGEDWGYDYSKFIESVGLHHNLKLRSAYGNELPYSNYTPTFVGIIDYIWYSAE 467 Query: 266 AYKFLIQESFSEILYNED--DIKSRGKRLSDHCPISIDY 302 E Y ++ D SDH +S ++ Sbjct: 468 RLIPSALLGPVEEAYIQEHVDGCPNPHFASDHLALSAEF 506 >gi|322386046|ref|ZP_08059685.1| exodeoxyribonuclease [Streptococcus cristatus ATCC 51100] gi|321269890|gb|EFX52811.1| exodeoxyribonuclease [Streptococcus cristatus ATCC 51100] Length = 275 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 80/305 (26%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + + + +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLS------QAVLRTLQAENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K ++P +GA S R Sbjct: 55 KHLEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPIVTFPEIGAP-STMDVEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +V ++ + + ++ L + Sbjct: 114 I-----ITLEFDDFFVTQVYTPNAGDGLKRLDERQVWDVKYAEYLASL--------DEQK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F N Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 VMEIE 274 >gi|226467620|emb|CAX69686.1| APEX nuclease [Schistosoma japonicum] Length = 319 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 84/304 (27%), Gaps = 80/304 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAVAK 82 ++LVSWN+N + +Y K +ADI +QE + + Sbjct: 65 LKLVSWNVNGIRAVIKNGGM---------------EYIKKENADIFCIQETKCPLHKIPS 109 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 ++ F+S+ ++ A+ K D R Sbjct: 110 EAKLPSYQSFWSSADKAGYA----------GTALFSKIAPKKVTYGIGRKVHDEEGR--- 156 Query: 143 RRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 ++ + +++ ++ + L L + + L ++ Sbjct: 157 ------VITAEFDRFYLVTAYVPNAGQGLARLPYREKEWDPDFLEYLRKL--------DA 202 Query: 202 LVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245 P ++ GD N + F K + + + + R Sbjct: 203 TKPVIVCGDLNVAHEEIDLARPDTNHKTAGFTDQERSGFTKLLSSANLIDTYRHFYPDRR 262 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 A + +DYF++ Q + + G SDHC Sbjct: 263 EAYSFWSYRTGARLINNGWRLDYFLVSQRILANVGDQEIR-----------CGVTGSDHC 311 Query: 297 PISI 300 P+ + Sbjct: 312 PVVL 315 >gi|113866254|ref|YP_724743.1| exodeoxyribonuclease III [Ralstonia eutropha H16] gi|113525030|emb|CAJ91375.1| Exodeoxyribonuclease III [Ralstonia eutropha H16] Length = 258 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 88/307 (28%), Gaps = 78/307 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VA 81 +R++S N+N + + + DAD+V +QE+ + A Sbjct: 2 LRIISANLNGIRSASKKGFF---------------DWMGKQDADMVCVQELKAQEADMTE 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + F+ +S + R K RV+ G +S + Sbjct: 47 AFLAPHGYHGFFHYAEKKGYSG--------VGLYTRHKPERVV------TGFGNSEFDSE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R VE+ + V+ +++ S + + LK S Sbjct: 93 GRY-----VEVQYPHLAVISVYVPSGSSGEERQLAKFRFMEAFLPHLLQLKA-------S 140 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKT---------------IDPNDSLIRFPKEKDSRCN 246 V+ GD N + + + + ++ D R Sbjct: 141 GREIVLCGDVNIAHKEIDIKNWKGNLKNSGFLPEERAWIGELFDVHGYVDVFRKLDPRPE 200 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + S + ++ SDH P Sbjct: 201 QYTWWSNRGQAYAKNVGWRIDYHLATPKIADTARLCSI-----------YKDEKFSDHAP 249 Query: 298 ISIDYDF 304 +SIDYD+ Sbjct: 250 LSIDYDY 256 >gi|126175498|ref|YP_001051647.1| endonuclease/exonuclease/phosphatase [Shewanella baltica OS155] gi|125998703|gb|ABN62778.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS155] Length = 403 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 44/371 (11%), Positives = 91/371 (24%), Gaps = 93/371 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +++ S N+ E S + L ++ + DIV QE+ S + Sbjct: 30 IKIASINLFNFIEPPLAYYDFENIYSHGQWQKKCQWLSEFLAHRQPDIVGFQEVFSPEPL 89 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137 ++ + + ++ A+A R V + + S Sbjct: 90 KRIASEQG-LVHFAVIDAPTLISDYIYRSPVVALASRYPIVEISSVEPDARLVAAMGLSS 148 Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENT-------------------- 176 A +R+ + VE+ K +H KS +LE Sbjct: 149 EFAFSRKVLRATVEVPHIGKCDYYVVHFKSKRAGLALEPKLIEPKRFEHQPLALDNLAPA 208 Query: 177 ------------------YSPSCSLLSQQAQWL-KDWITQKKESLVPFVIAGDFNR---- 213 S +A L + +++ S P ++ GDFN Sbjct: 209 ASMKLHSETQLLTEQALGRWASTMQRGAEAALLFNGILVRRQASKHPVIVMGDFNDSLTM 268 Query: 214 -----------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN---------------- 246 ++ + F + + Sbjct: 269 GALDALTIQGESLHSNDIKAAGLGHLSDAALAAVFAQYQLKDAYELFIEANLRDSLTGYT 328 Query: 247 ---------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKR 291 + +DY ++ + + Y D R Sbjct: 329 AYHREHRAATHYYGPKGSVLDYILLSSEFDASHGRSLAQVVDYQTCDRHLVRPEYERDAY 388 Query: 292 LSDHCPISIDY 302 +DH P+ ++ Sbjct: 389 STDHAPVIVEL 399 >gi|313682316|ref|YP_004060054.1| exodeoxyribonuclease iii [Sulfuricurvum kujiense DSM 16994] gi|313155176|gb|ADR33854.1| exodeoxyribonuclease III [Sulfuricurvum kujiense DSM 16994] Length = 258 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 39/306 (12%), Positives = 87/306 (28%), Gaps = 75/306 (24%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A+ + ++SWN+N + + + + IV LQE+ A+ Sbjct: 2 AESIEIISWNVNGIRAVAEKGGF---------------DWLEERQPHIVCLQEI---KAL 43 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++ P+N + +S N + + ++ K + + + + Sbjct: 44 SEQIPQNLFSHHFS-----NITVNSAEKKGYSGTLTASKLEPIYSDTRADIDIMNEGR-- 96 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +VE + I + +++ + + + L+ Sbjct: 97 --------IVEHHYGDIALFNVYFPNGQKDEERLAYKLEFYERFLDYCEALRR------- 141 Query: 201 SLVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 +I GD N +L D+ + + + F + Sbjct: 142 EGKKIIICGDVNTAHRPIDLKNPKSNEKTSGFLPIERDWIDKLLSHGYIDTFRHVHGDKE 201 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 N + IDYF + + + L + + SDHC Sbjct: 202 NEYSWWSYRFSARSKNVGWRIDYFFISDDLAESLEDAFILQEI-----------MGSDHC 250 Query: 297 PISIDY 302 P+ I Sbjct: 251 PVGIRL 256 >gi|213405953|ref|XP_002173748.1| CCR4-Not complex subunit Ccr4 [Schizosaccharomyces japonicus yFS275] gi|212001795|gb|EEB07455.1| CCR4-Not complex subunit Ccr4 [Schizosaccharomyces japonicus yFS275] Length = 653 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 38/339 (11%), Positives = 81/339 (23%), Gaps = 60/339 (17%) Query: 24 VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++S+N+ + + + L+ Q ADI+ LQE+ N + Sbjct: 297 FTVMSYNVLCERYATPVMYGYTPSWALAWSYRKELIMQEIVGYSADIICLQEVDVENYDS 356 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----------AIAVRKKN-------VRV 123 PK + + + + + + + K + Sbjct: 357 FFAPKMSLKGYKGVHYPKSRVRTMNEAERRVVDGCATFFKTSKFVMHDKILIEFNQAPSL 416 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 +Q L + + ++ ++E ++ + + L Sbjct: 417 RRQDIKLTPDMYNRVMTKDNISILTMLESKDTGTKLIVANCHIHWDPQFRDVKLMQVAML 476 Query: 184 LSQQAQWLKDWITQKKE-------------------SLVPFVIAGDFNRKINY------- 217 + + AQ D+ + S +P +I GDFN Sbjct: 477 MDELAQAASDFQRSPSKLPDDHFDGSTRKKPSYTHYSKIPVLICGDFNSVPGSGVLDFLS 536 Query: 218 -----LGNNDDFWKTIDPNDSLIRFPKEKDSRCN--------ANKNLRNKIPIDYFVMDQ 264 + D R N IDY Sbjct: 537 SGMVERKHEDFMEHDYGDYTVAGRSHTFSLKSAYSANNDLPFTNFTPGFSGTIDYVWYTN 596 Query: 265 N-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N + + + SDH + ++ Sbjct: 597 NSLEVTGLLKGVDPDYLSTVVGFPNPHFPSDHICLLAEF 635 >gi|260797709|ref|XP_002593844.1| hypothetical protein BRAFLDRAFT_75696 [Branchiostoma floridae] gi|229279074|gb|EEN49855.1| hypothetical protein BRAFLDRAFT_75696 [Branchiostoma floridae] Length = 403 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 43/294 (14%), Positives = 87/294 (29%), Gaps = 48/294 (16%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + V L++WNIN L ++ + + +L D+VFLQE+ Sbjct: 118 SEPVTPGFTLLTWNINGLDQRNIL-----------ERTKAVCNTINSLYPDVVFLQEVIP 166 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + S TA+ +RK ++ + Q+ Sbjct: 167 QTFEYIEAKCDRYKAIASGTEQ-----------YFTAMLLRKSSITFISQNIQPFPTT-- 213 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R + + + ++ HL+S + +Q Q + + Sbjct: 214 ---RMMRNLLIVKARFGSVPLCLMTSHLEST----------KDHAAERKRQLQQVLQTVM 260 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN------ 250 Q+ + ++ GD N + + P + + +KN Sbjct: 261 QQ-DQTNTVIVGGDLNLRDTEVAAVGGLPAGTVDFWEACGSPLQFKFTWDVSKNDNLDWQ 319 Query: 251 --LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R K D + + L ES D ++ + SDH + + Sbjct: 320 LKFRPKCRFDRVYVRSSRPDQLAPESIK--FVGTDRLEGCRRFPSDHWGLLCKF 371 >gi|119953317|ref|YP_945526.1| exodeoxyribonuclease III [Borrelia turicatae 91E135] gi|119862088|gb|AAX17856.1| exodeoxyribonuclease III [Borrelia turicatae 91E135] Length = 252 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 78/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 + L+SWN+N + G ++ + + D++ LQE Sbjct: 1 MNLISWNVNGIRAIFGKGF---------------LEFIEKYNPDVLCLQETKAFKEQLPK 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + ++S + +S + + L Sbjct: 46 ELINIEGYYSYFSKSIIKGYSGVGLYSK---------------VKPIKLENMNMEIFDRE 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + + +++ + + + + L+ S Sbjct: 91 GRCLIA-----HYRDFILINAYFPN-------SQSLRKRLPYKLEFLMSLESIANMFVTS 138 Query: 202 LVPFVIAGDFNRKINYLG--------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 VI GDFN + + W N + + + Sbjct: 139 GKNIVICGDFNIAHTEIDLANPKTSRESAGFYIEETTWMDNFLNGGYVDTFRMFNMDPGN 198 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 K IDYF++++ + + SDHCP+ Sbjct: 199 YTWWDYKTRARERNIGWRIDYFIVNEFFKSKVKDALILREV-----------MGSDHCPV 247 Query: 299 SIDY 302 ++ Sbjct: 248 FLEL 251 >gi|58040181|ref|YP_192145.1| exodeoxyribonuclease III [Gluconobacter oxydans 621H] gi|58002595|gb|AAW61489.1| Exodeoxyribonuclease III [Gluconobacter oxydans 621H] Length = 275 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 32/308 (10%), Positives = 79/308 (25%), Gaps = 74/308 (24%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEMGS 76 SWNIN + ++ + + + D++ LQE+ Sbjct: 17 PMSPTPFTFASWNIN----------------SIRARAHHVQDWLERHPECDLLCLQEIKC 60 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 ++ F + S + +A+ + + + Sbjct: 61 EDS-----------QFPAVFAEAGLDVAISGQKAYNGVALIGRRPFTVTH--------HT 101 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + A + E++G I + +++L + + L Sbjct: 102 LPAFDHPSARYIEAELDG--ITIGNLYLPNGNSGGEDGYATKLAF------FDALAARAR 153 Query: 197 QKKESLVPFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEK 241 ++ PF GDFN ++ ++ + Sbjct: 154 VLLDAEKPFAFIGDFNVCPTDEDLAPGALSTDDALVRPETRAAFRRLEWMGLTDALRALQ 213 Query: 242 DSRCNANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + ID+ ++ + L + D + ++ S Sbjct: 214 PTGRHYTFWDYQAAAFQRNSGLRIDHALLSPRLTERLKS-------FVIDRDERAKEKAS 266 Query: 294 DHCPISID 301 DH P+ + Sbjct: 267 DHVPVLVT 274 >gi|50950149|ref|NP_001002946.1| deoxyribonuclease-1 precursor [Canis lupus familiaris] gi|62510684|sp|Q767J3|DNAS1_CANFA RecName: Full=Deoxyribonuclease-1; AltName: Full=Deoxyribonuclease I; Short=DNase I; Flags: Precursor gi|60729694|pir||JC8053 deoxyribonuclease I (EC 3.1.21.1), pancreatic type - dog gi|40313536|dbj|BAD06000.1| deoxyribonuclease I [Canis lupus familiaris] Length = 284 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 41/283 (14%), Positives = 86/283 (30%), Gaps = 30/283 (10%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AVAK 82 R+ ++NI T E + + Q D+ +QE+ + AV K Sbjct: 24 RMAAFNIRTFGET---------KMSNATLSKYIVQILSRY--DVAVVQEVRDSHLTAVGK 72 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + +++ S+ R V VL G + + + Sbjct: 73 LLDTLNQDDPNAYHYVVSEPLGRSSYKERYLFLFRPDRVSVLDSYQYDDGCEPCGNDTFS 132 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + ++ + LD++ + L Q +W L Sbjct: 133 REPAIVRFHSPLTEVKEFAVVPLHAAPLDAVAEIDALYDVYLDVQHKW----------DL 182 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 V+ GDFN +Y+ + + N + + + + + D V+ Sbjct: 183 EDIVLMGDFNAGCSYVAASQWSSIRLRTNPAFQWLIPDTADTTSTSTHCAY----DRIVV 238 Query: 263 -DQNAYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302 ++ ES + + S + +SDH P+ + Sbjct: 239 AGSQLQHAVVPESAAPFNFQVAYGLSSQLAQAISDHYPVEVTL 281 >gi|291515593|emb|CBK64803.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301] Length = 291 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 40/283 (14%), Positives = 79/283 (27%), Gaps = 50/283 (17%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 VRL ++N + W + ++Y + +D D++ LQE+ Sbjct: 56 PNSVRLATYNTH------RCEGWTQNSGTDRANYNNTAKVISLMDPDVIALQELDKNTTW 109 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + T + K S I + K + L G Sbjct: 110 HQ--TDQLQELADRTGMRPYYCKTISYRGGDYGIGILCKTAPKNTYAGDLPGT------- 160 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R+ + + H S + + + ++I Sbjct: 161 EARKFFLAEFD----GYIFIATHFCH------------QSDENRQRSFEIITEYIAANYA 204 Query: 201 S-LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 + P +AGD N + + K + N N + IDY Sbjct: 205 AYTKPIYLAGDLNTS--------------KLPAAALESWKIISTSANTFVNTSSPSRIDY 250 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + Y E ++ + +SDH P+ +D Sbjct: 251 VLVYTGNSPSYEVLRTAVPSYEEINVMT----VSDHLPVLVDL 289 >gi|284025052|ref|ZP_06379450.1| phospholipase C [Staphylococcus aureus subsp. aureus 132] Length = 236 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 65/216 (30%), Gaps = 18/216 (8%) Query: 97 RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK 156 S +A+ K + + F N+ V +E NGK Sbjct: 19 WDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNGKN 77 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKI 215 + V+ H +S DS + ++Q + + D++ + I GD N Sbjct: 78 VHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNVN- 132 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK-- 268 D K ++ ND L N +DY D++ + Sbjct: 133 KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQPK 192 Query: 269 FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300 L+ E +E D + SDH PI Sbjct: 193 QLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 228 >gi|193211783|ref|YP_001997736.1| exodeoxyribonuclease III [Chlorobaculum parvum NCIB 8327] gi|193085260|gb|ACF10536.1| exodeoxyribonuclease III [Chlorobaculum parvum NCIB 8327] Length = 253 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 32/305 (10%), Positives = 78/305 (25%), Gaps = 76/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + +WNIN + L + + D V L+E+ A + Sbjct: 1 MNIYTWNING----------------IRARQEALAAWLDSRKPDFVVLEEV---KAREEE 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ + S + + + VR++++ + P ++ Sbjct: 42 IPETITDFAGYRKFWNGSSFKKGYSG--VGLLVREESLGDVSCEVPPFDVENR------- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ + ++ ++ + LK++I Sbjct: 93 -----TLVLHAPQFTLIGTYVPRGNGAEHYAVKLR--------YLADLKEYIASLIAEGQ 139 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++AGD N + + + + + Sbjct: 140 EVILAGDMNVALTEIDVHRSQNKPGATGLRPEERSAIEAHLELGLHDIVRELNPDKKDLF 199 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N ID + + S ++ SDH P+S Sbjct: 200 TWWPNWKFARERNLGWRIDCIYLSPALAGKVSGVSV-----------DLDEKSSDHAPVS 248 Query: 300 IDYDF 304 ++ F Sbjct: 249 VELAF 253 >gi|262373770|ref|ZP_06067048.1| exodeoxyribonuclease III [Acinetobacter junii SH205] gi|262311523|gb|EEY92609.1| exodeoxyribonuclease III [Acinetobacter junii SH205] Length = 280 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 82/305 (26%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +R+VS N+N L L ++ + DAD+V +QE ++ Sbjct: 20 LRVVSINVNGLRSSVTKG---------------LLEWLEQSDADVVCMQESRITHEQWTD 64 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 F W ++ A+ + + ++ DS R Sbjct: 65 KFKPEGWYTHLFPAERAGYA----------GTAIYSRLPFITVKNGLGFELADSQGRF-- 112 Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++ + + ++L S + + + + Q ++ Sbjct: 113 ---ITAEFDLGLSHPVHIASLYLPSGSSGED-------AQARKDLFLLEYAKILKQWRDE 162 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD+N + + + I + + +E Sbjct: 163 NKSIIVCGDYNIVHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDDLGYVDTFREVRQEAE 222 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + + + SDH P Sbjct: 223 LYSWWSNRGQARAKNVGWRIDYQACSPDWKARTTNAWV-----------YKEQWFSDHAP 271 Query: 298 ISIDY 302 + IDY Sbjct: 272 VIIDY 276 >gi|300780401|ref|ZP_07090257.1| possible exodeoxyribonuclease III [Corynebacterium genitalium ATCC 33030] gi|300534511|gb|EFK55570.1| possible exodeoxyribonuclease III [Corynebacterium genitalium ATCC 33030] Length = 260 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 36/291 (12%), Positives = 73/291 (25%), Gaps = 52/291 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WNIN + + + D D++ +QE + Sbjct: 1 MRVATWNIN----------------SVRTRIDRAVAFLERNDVDVLAMQETKCSDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL--LGAKDSFSRAG 141 YS + +A+ + + G Sbjct: 41 ------KFPYSAFEAAGYDVAHVGYHQWNGVAIISRVGLENVRDGFDGQPGFNKEPDAPQ 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R A + G + V +++ + + Y + ++ + Sbjct: 95 DREARAVAATCGG--VEVWSLYVPNGREIGDRHYDYKLEFLWR----------LAEQIDP 142 Query: 202 LVPFVIAGDFNRKINYLGNNDDFW-------KTIDPNDSLIRFPKEKDSRCNA--NKNLR 252 P V GD+N D + + + + Sbjct: 143 STPQVFCGDYNIAPTDKDVWDRAFFEGKTHVTEPERAAFEALLEAGLNQATHPEPYSYWD 202 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K F + + D + GK SDH P+ +DYD Sbjct: 203 YKGM--RFQKGEGMLIDFQLSGLEGAGF-VDTHEREGKGTSDHAPVVVDYD 250 >gi|88601744|ref|YP_501922.1| exodeoxyribonuclease III (xth) [Methanospirillum hungatei JF-1] gi|88187206|gb|ABD40203.1| exodeoxyribonuclease III (xth) [Methanospirillum hungatei JF-1] Length = 264 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 35/308 (11%), Positives = 78/308 (25%), Gaps = 71/308 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNA 79 + L SWN+N L + + + + DI+ +QE +++ Sbjct: 2 KTYTLYSWNVNGLRAISSKEVLPGVLFPGLP---------AHENIDILCIQETKADAHSL 52 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + + + + + +A+ + + L DS R Sbjct: 53 KPDITRIPDYFFYINPAERKGY----------SGVAMYSRTEPESIELGGLSPEFDSEGR 102 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 + + +++++ + D + L + I Sbjct: 103 I---------ITARFPEFVLMNVYFPNGGASDE-----RLAFKLRFY--DAFLEKIKTMD 146 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRC 245 + + GD N + + + Sbjct: 147 AAGERIIFCGDVNTAHKPIDLARPKENELVSGFLPIEREWIDRVIAAGFYDSFRLFSDEG 206 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 N K IDYF ++ A F+ SDHC Sbjct: 207 NQYSWWDYKSRARTRNVGWRIDYFFVNTAAKPFITGAGIR-----------NDIMGSDHC 255 Query: 297 PISIDYDF 304 P+++ +F Sbjct: 256 PVTLTLEF 263 >gi|296876863|ref|ZP_06900911.1| exodeoxyribonuclease III [Streptococcus parasanguinis ATCC 15912] gi|296432365|gb|EFH18164.1| exodeoxyribonuclease III [Streptococcus parasanguinis ATCC 15912] Length = 282 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 35/307 (11%), Positives = 77/307 (25%), Gaps = 56/307 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++L+SWNI++L+ + + + Q DADI+ +QE Sbjct: 5 GNTMKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAEDADIIAIQETKLSAKG 58 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + S ++ + K ++P +GA S Sbjct: 59 PTKKHLEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPVVTFPEIGAP-STMDL 117 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + + +V ++ + ++ L + Sbjct: 118 EGRI-----ITLEFDHFFVTQVYTPNAGDGLKRLEERQVWDVKYAKYLAEL--------D 164 Query: 201 SLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 P + GD+N R + + + + F Sbjct: 165 KQKPVLATGDYNVAHKEIDLANPASNRRSPGFTDEEREGFTNLLAKGFTDTFRHLHGDVP 224 Query: 246 NANKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + IDY++ + + + + DH Sbjct: 225 ERYTWWAQRSKTSKINNTGWRIDYWLTSNRVTDKITKSDMIDSGARQ-----------DH 273 Query: 296 CPISIDY 302 PI ++ Sbjct: 274 TPIVLEI 280 >gi|288929660|ref|ZP_06423504.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 317 str. F0108] gi|288329165|gb|EFC67752.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 317 str. F0108] Length = 249 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 34/300 (11%), Positives = 79/300 (26%), Gaps = 77/300 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L G K LDAD LQE A Sbjct: 1 MKFISWNVNGLRAVVGKDFE---------------NTFKALDADFFCLQETK-MQAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + F++ ++ ++ A+ ++ + + D R Sbjct: 45 LQFDGYDSFWN----------YADKKGYSGTAIYTRHKPLNVSYGIGIDQHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + Q + ++ + Sbjct: 91 -----VITLEMPTFFLVTVYTPN-------SQEELRRLDYRMQWEDDFQAYL-HNLDKCK 137 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNANK 249 P ++ GD N + + + + + K Sbjct: 138 PVIVCGDMNVAHQEIDLKNPKTNRRNAGFTDEERQKMTQLLDAGFTDTFRWKYPEEVTYS 197 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF++ ++ + SDHCP+ + Sbjct: 198 WWSYRFKARERNTGWRIDYFLVSNRLQAEVLDAKIHTDIL-----------GSDHCPVEL 246 >gi|212692207|ref|ZP_03300335.1| hypothetical protein BACDOR_01703 [Bacteroides dorei DSM 17855] gi|237711516|ref|ZP_04541997.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237726027|ref|ZP_04556508.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265752941|ref|ZP_06088510.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|212665084|gb|EEB25656.1| hypothetical protein BACDOR_01703 [Bacteroides dorei DSM 17855] gi|229435835|gb|EEO45912.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229454211|gb|EEO59932.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263236127|gb|EEZ21622.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 359 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 41/336 (12%), Positives = 88/336 (26%), Gaps = 85/336 (25%) Query: 3 RKYVLALVFFLVPCTASV---------------AQKVRLVSWNINTLSEQEGVSLWKNSV 47 RKY L L F + C+ ++ +S+N + + + Sbjct: 66 RKYAL-LSFLGLVCSIGAIRTYFPVNVFVSDVPEGAIKFLSYNTMAFEKNRANTKDNPNP 124 Query: 48 KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107 + +Y +N +ADI+ LQE + K Sbjct: 125 ---------VLEYLRNSNADIICLQE--------YIVGGRLTKKEVDYALRDYPYKNYYK 167 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 + + + + ++ +++NG + V++ HL+S Sbjct: 168 ISGANGLGCYSRFPILSAHPVRYASLNN--------GSIAYKIKVNGDTLLVVNNHLESN 219 Query: 168 CFLDSLENTYS-----------------------PSCSLLSQQAQWLKDWITQKKESLVP 204 + + Y + ++ + QA + + K Sbjct: 220 KLTEKDKEVYREMMKDPDKQKVSQGSRLLIRKLAEASAIRAVQADSIARLVAGYKGGG-- 277 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 ++ GDFN + + ++ N ID ++ + Sbjct: 278 IIVCGDFNDSPISYT-HRVVGEGLNDAFVESGNGFGISYNQNHFYF-----RIDNILLSK 331 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 N + + SDH PI Sbjct: 332 NLKSYRCTV-------------DNTIKSSDHYPIWC 354 >gi|302824275|ref|XP_002993782.1| hypothetical protein SELMODRAFT_137611 [Selaginella moellendorffii] gi|300138378|gb|EFJ05148.1| hypothetical protein SELMODRAFT_137611 [Selaginella moellendorffii] Length = 351 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 40/342 (11%), Positives = 93/342 (27%), Gaps = 89/342 (26%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM------ 74 A R +SWN N+L + R ++ + + + D D++ +QE+ Sbjct: 30 ADPSRFMSWNANSL------------LLRFKNNREEVMSFIRGFDPDVICIQEVRLPAAG 77 Query: 75 -----------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH--TAIAVRKKNV 121 +A A+ + + + + + TA+ V+ Sbjct: 78 FKGEKKNPGEIKDDSAAARNDKQAVMRVLSVSPMADYSVWWSLGENKYAGTALFVKNCFK 137 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 V KD+ + R + +L+ + + + Sbjct: 138 PVSVAFNIDNKGKDAQRHEIDGRIILAEF----GSFTLLNTYAPN-----NGWKEEENGF 188 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG---------------------- 219 + + ++++ + P + GD N + Sbjct: 189 VRRRAWDKKVLEFVSSCSK---PLIWCGDLNVSHQEIDVTHPEFFANATQPGYTPPNKED 245 Query: 220 ---------NNDDFWKTIDPNDSLIRFPK----------EKDSRCNANKNLRNKIPIDYF 260 F ++ + + + S K ++ IDYF Sbjct: 246 AGQPGFTLNERARFSTILNRGNLVDTYRHLHEKQDLEAGFTWSGNPVGKYRGKRMRIDYF 305 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + L + G SDHCP++++ Sbjct: 306 LISKALLPRLASSKIHGRGIELE-----GFLGSDHCPLTMEL 342 >gi|156037768|ref|XP_001586611.1| hypothetical protein SS1G_12598 [Sclerotinia sclerotiorum 1980] gi|154698006|gb|EDN97744.1| hypothetical protein SS1G_12598 [Sclerotinia sclerotiorum 1980 UF-70] Length = 632 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 40/366 (10%), Positives = 88/366 (24%), Gaps = 77/366 (21%) Query: 15 PCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 A ++ + S+NI + + + + + D+D V LQ Sbjct: 240 TTVAPDVERFTVFSYNILCDNYVGPGQYGYVPSKALDWEHRRHEILREIEERDSDFVCLQ 299 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRKKNVRVLQQSY 128 E+ + N K + + + +K S + A + +L + Sbjct: 300 EVDAENFREFFSVKLAYKDYKGVWWPKSRAKTMSESAAKAVDGCATFYKNNKYILLDKQL 359 Query: 129 PLL-----------GAKDSFSRAGNRRAVEL----LVEINGKKIWVLDIHLKSFCF-LDS 172 D F+R R + + + G ++ V + H+ D Sbjct: 360 IDFANIAINRPDMKNQHDIFNRVMPRDHIAVLGFFENRLTGSRVIVANAHIFWDPAYADV 419 Query: 173 LENTYSPSCSLLSQQAQWLKDW------------------------------ITQKKESL 202 + +S+ A+ + + + ++ Sbjct: 420 KLIQIAILMESISKFAEKYQRFPPCKDKKAYTITDDSNSDAPVEVAPEPAPSMEYTNKTQ 479 Query: 203 VPFVIAGDFNRKINYLGN------------------------NDDFWKTIDPNDSLIRFP 238 +P ++ GD N + D + Sbjct: 480 IPLIVCGDLNSTADSSVYELLATGRVAPDHPDLGNYQYGNFTRDGIEHPFSLRSAYTNLA 539 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY-NEDDIKSRGKRLSDHCP 297 N ID+ NA + + Y SDH Sbjct: 540 DGPQELTWTNYTPGFTDHIDHIWYSTNALENTDLLGPVDEEYMRTVPGLPHYHFPSDHLA 599 Query: 298 ISIDYD 303 + ++ Sbjct: 600 LLARFN 605 >gi|11498188|ref|NP_069414.1| exodeoxyribonuclease III (xthA) [Archaeoglobus fulgidus DSM 4304] gi|2650040|gb|AAB90657.1| exodeoxyribonuclease III (xthA) [Archaeoglobus fulgidus DSM 4304] Length = 257 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 78/306 (25%), Gaps = 77/306 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N S ++ + K DI+ +QE N Sbjct: 2 LKIATFNVN----------------SIRSRLHIVIPWLKENKPDILCMQETKVENR---- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + I + S + +A+ KD Sbjct: 42 ------KFPEADFHRIGYHVVFSGSKGRNGVAIASLEEPEDVSFGLDSEPKDEDR----- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 L+ I V++ ++ +DS + Y Q + L ++ + + Sbjct: 91 -----LIRAKIAGIDVINTYVPQGFKIDSEKYQYK------LQWLERLYHYLQKTVDFRS 139 Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 V GD N + + K ++ + ++ Sbjct: 140 FAVWCGDMNVAPEPIDVHSPDKLKNHVCFHEDARRAYKKILELG--FVDVLRKIHPNERI 197 Query: 248 NKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D + + + D ++ SDH P Sbjct: 198 YTFYDYRVKGAIERGLGWRVDAILATPPLAERCVDCYA-------DIKPRLAEKPSDHLP 250 Query: 298 ISIDYD 303 + +D Sbjct: 251 LVAVFD 256 >gi|317505035|ref|ZP_07962983.1| endonuclease/exonuclease/phosphatase family protein [Prevotella salivae DSM 15606] gi|315663917|gb|EFV03636.1| endonuclease/exonuclease/phosphatase family protein [Prevotella salivae DSM 15606] Length = 362 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 33/352 (9%), Positives = 87/352 (24%), Gaps = 64/352 (18%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRL---VSWNINTLSEQEGVSLWKN-----------S 46 M R+ +L + F+ + + +K + +N L + + + Sbjct: 16 MKRQLILLAMLFVCIASIAQ-KKFSVYAIGFYNQENLFDTCHDAGKYDQDFLPTGSYHWD 74 Query: 47 VKRTTSDYTLLRQYAKNLDADI--------VFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + + + + ++ D+ + L E+ + + + + Sbjct: 75 GLKYSHKLHNMARALADMGTDVLPNVGCAVIGLSEVEHNKVLTDLTAQPELK---ARNYQ 131 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 H + I A+ + Q P + + + R + + + + + Sbjct: 132 FCHIEGPDKRGIDCALIYNPSLFNLETQRLVPYRNSAEQDTSFATRGFLTITGTLANEPV 191 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 + HL S S + + L I + GD N Sbjct: 192 AFVVCHLPSRYNGSSYREWGASQIKAVKDSLLALNPQIK--------VFVMGDMNDDPTD 243 Query: 218 LGNNDDFWKTID------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 + + + K + D +M N Sbjct: 244 KSMHSTLSAKESVEKVEANDMYNPWYNILKKQGKGTLMYRGSWNLFDQIIMTPNLINKKG 303 Query: 272 QESFSEILY-----------------------NEDDIKSRGKRLSDHCPISI 300 + +++ + + + SDH P+ + Sbjct: 304 ERNYTTLKFWKNQIQRMPYLFQQEGQYKGSPKRTSAGGAWLDGFSDHLPVCV 355 >gi|297198294|ref|ZP_06915691.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC 29083] gi|297147051|gb|EFH28465.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC 29083] Length = 377 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 33/293 (11%), Positives = 73/293 (24%), Gaps = 55/293 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++R+++WN+ + + D D+V LQE +A Sbjct: 122 PHRLRVMTWNLWFGGT------------KVHDHRAKQLKVITETDVDVVGLQETYG-SAA 168 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++ W + T + + + P +G Sbjct: 169 EELAEALGWHHHRAG----------------TNLGIISRFPITAVLGDPDVGFY------ 206 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 A + + +++ V HL + + + Q + I Sbjct: 207 ---GAAGARIAVEEREVEVWTAHLDYERYGP-YASEPLAHEEVRLAQMRDTLHRI----G 258 Query: 201 SLVPFVIAGDFNRKINYLGNN------DDFWKTIDPNDSLIRFPKEKDSRCNANK----N 250 P V+ GDFN + + + + P + + Sbjct: 259 DSAPVVLVGDFNCPSHLDWPDVEWPVTKAAEEAGFGDSFRQARPDAVRDPGHTWSPVHAH 318 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ID+ + + L + SDH + + Sbjct: 319 PEPQDRIDFVLHRG--LRVLDSRTCVSDTPRTWPDVEDNDWPSDHAAVITTFS 369 >gi|196011674|ref|XP_002115700.1| hypothetical protein TRIADDRAFT_30062 [Trichoplax adhaerens] gi|190581476|gb|EDV21552.1| hypothetical protein TRIADDRAFT_30062 [Trichoplax adhaerens] Length = 538 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 39/337 (11%), Positives = 95/337 (28%), Gaps = 57/337 (16%) Query: 24 VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++ +N+ + + + + + + +AD++ LQE+ + Sbjct: 198 FTVMCYNVLCEKYATRSSYGYCPSWALAWDYRRQNIMKEILHYNADVICLQEVATDQFYT 257 Query: 82 KVFPKNTWCIFYSTERLINHSKRDS----NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + P+ + + ++ + AI R ++++ Sbjct: 258 YLLPELKLHGYDGIFGAKSRARTMVEPERSAVDGCAIFFRLNKFTLVKEDLIEFNHLAMM 317 Query: 138 SRAGN-----------RRAVELLVEIN-----GKKIWVLDIHLKSFC---FLDSLENTYS 178 + A+ ++ +N GK + ++ + F D Sbjct: 318 HAEKSEDMINRVMTKDNIAMICVLRVNKTDSSGKPLRLIVANAHMHWDPEFSDVKIVQTV 377 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL-------------------G 219 + + + I +P V+ D N + Sbjct: 378 MLVHEIYSLMKTIASEIDCAISE-IPLVVCADLNSLPSSAVVEMLTSGNVSVKHPDFKGK 436 Query: 220 NNDDFW----KTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVM-DQNAYKF 269 + D ++ + ++L+ K + N IDY + + Y Sbjct: 437 SYDGYFNNSCNILTRENNLVLPFKLAHAANQDFLPYTNMTYDFTGIIDYILFPSKLLYPS 496 Query: 270 LIQESFSEILYNEDDIKSRGKR--LSDHCPISIDYDF 304 I +S+ E+ I SDH + I+ DF Sbjct: 497 GILGGYSQAWVEENKIVGYPHPHVPSDHISVLIELDF 533 >gi|320094486|ref|ZP_08026261.1| hypothetical protein HMPREF9005_0873 [Actinomyces sp. oral taxon 178 str. F0338] gi|319978579|gb|EFW10147.1| hypothetical protein HMPREF9005_0873 [Actinomyces sp. oral taxon 178 str. F0338] Length = 830 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 43/347 (12%), Positives = 85/347 (24%), Gaps = 67/347 (19%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWK----------------------NSVKRTTS 52 P V VR+ ++N+ G S + Sbjct: 418 PGVPQVEGDVRVATFNVLNYFSDLGQDEPGCQGYPDREGAFVTAKKCKVRGAWSRAAFEN 477 Query: 53 DYTLLRQYAKNLDADIVFLQEMGSY----------NAVAKVFPKNTWCIFYSTERLINHS 102 T + Q + AD+V L+E+ + A+ + + Sbjct: 478 QQTKIVQAINAIGADVVALEEIENPVAAGAGQDRDGALKALVDALNAHAGEQVWAHVPSP 537 Query: 103 KRDSNND--IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN---RRAVELLVEINGKKI 157 ++ I A R+ + + +S L + A + GK Sbjct: 538 AAVPADEDVIRVAFIYRRATIEPVGESKILDDPAFTGLARQPLAQEFAPVVSAPRTGKNF 597 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK------DWITQKKESLVPFVIAGDF 211 V+ H KS + + + ++ ++ + P ++ GDF Sbjct: 598 VVVANHFKSKGSVPQGMEEGNKDTGDGQGNSNAIRVAQARALAAFAEQFAGTPTLLVGDF 657 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N K + + + +D+ + A + Sbjct: 658 NSYSKEDP-----LKALTDAGWVHESADSAA----SYVYGGRSGSLDHVFSNAAADPLVR 708 Query: 272 QESFSEILYNEDDIKSRG---------------KRLSDHCPISIDYD 303 + + E R SDH P I D Sbjct: 709 GVASWALNAQESVAFEYSRANSNAHLAFEADNPYRSSDHNPEIIGLD 755 >gi|315452849|ref|YP_004073119.1| exodeoxyribonuclease [Helicobacter felis ATCC 49179] gi|315131901|emb|CBY82529.1| exodeoxyribonuclease [Helicobacter felis ATCC 49179] Length = 255 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 77/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RLVSWN+N L + ADI +QE A Sbjct: 1 MRLVSWNVNGLRACMQKGFK---------------DFLLKSGADIFCVQETKMQPDQADF 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 +N + S + ++ + K+ + + L D+ R Sbjct: 46 VFENYHAFWNSAQ-----------KKGYSGVLTLSKSAPLDVRYGLGLEEHDTEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++++++ + S+ + Q L S Sbjct: 91 -----VITCEYEYFYLVNVYTPNSQRGLLRLPYRLQWESVFREFLQNLA--------SHK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GD N + + + + + + Sbjct: 138 EVLICGDLNVAHTEIDLTNPQSNRYNAGFSDPERNAFGQLLQLGLIDTYRHFYPDKTEVY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF+ Q L + SDHCP+ Sbjct: 198 TWWSYMNQSRARNIGWRIDYFLASQGLRSQLKDACIYAHIL-----------GSDHCPVG 246 Query: 300 IDYD 303 ++ Sbjct: 247 LEMS 250 >gi|225351376|ref|ZP_03742399.1| hypothetical protein BIFPSEUDO_02970 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157720|gb|EEG71003.1| hypothetical protein BIFPSEUDO_02970 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 286 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 83/312 (26%), Gaps = 59/312 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-AVA 81 + + + N+N + + + ++A D+ +QE+ + + Sbjct: 2 TITITTSNVNGIRA---------------AKRKGIEEWAGRNTPDVWCMQEVRAPQNEID 46 Query: 82 KVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +F + + S + ++ + + V + Y L G +D Sbjct: 47 PIFDEFGFEYSTAGRISDQSELHRMNEICRIKGRAGVGLLSALPVVD-KRYGLPGLEDDV 105 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-PSCSLLSQQAQWLKDWIT 196 A G I V+ +++ + D + + + + L+D Sbjct: 106 DSGRWIEADMQT--PQGYVITVVCVYVHAGNTDDPEKMKQKYRFLDTMLIRMEQLRD--- 160 Query: 197 QKKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKE 240 + V+ GDFN K + + + Sbjct: 161 EAAHGGKQAVLCGDFNIAHTPLDIKNAKANETHAGFLPEERAYVDKWLGELEFVDVMRNL 220 Query: 241 KDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + IDY + + D + R Sbjct: 221 AGDIQGPYTWWSQRGRAFDNNVGWRIDYQFATPELAETACG-------FVIDKAPTYDLR 273 Query: 292 LSDHCPISIDYD 303 SDH P+SI YD Sbjct: 274 WSDHAPLSIMYD 285 >gi|88801994|ref|ZP_01117522.1| exodeoxyribonuclease III [Polaribacter irgensii 23-P] gi|88782652|gb|EAR13829.1| exodeoxyribonuclease III [Polaribacter irgensii 23-P] Length = 253 Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 32/302 (10%), Positives = 86/302 (28%), Gaps = 72/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+N+N + + + + D++ +QE ++ Sbjct: 1 MKIISYNVNGIRAALKKGF---------------LDWLQVANPDVLCIQETKAHKD---- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S + + A + + ++ G R Sbjct: 42 ------QLDLSEFENAGYPYHYWFSAQKKGYAS-VAVLCKEKPNHVEYGTGIETMDFEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ + V+ ++L S LD L ++++I K+ + Sbjct: 95 N-----LRVDFDAVSVMSMYLPSGTNLDRLNFK--------LNYMDEIQEYINNLKKEIP 141 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP-------------NDSLIRFPKEKDSRCNANKN 250 V+ GD+N + ++ K + + + + A Sbjct: 142 NLVVCGDYNICHEEMDIHNPKMKGVSGFLPEERTWMSDFIKSGFVDSFRYLNQDVQAYSW 201 Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + +DY ++ + + + SDHCPI ++ Sbjct: 202 WSYRANARANNKGWRLDYAMVSSALKAHISRA-----------YILSEAKHSDHCPIVVE 250 Query: 302 YD 303 + Sbjct: 251 LN 252 >gi|326929304|ref|XP_003210807.1| PREDICTED: deoxyribonuclease-1-like 2-like [Meleagris gallopavo] Length = 278 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 39/291 (13%), Positives = 85/291 (29%), Gaps = 39/291 (13%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 +R+ ++NI +S S ++ + D+V +QE+ + Sbjct: 18 PATATLRIGAFNIQAFG---------DSKMSDESVAGVIISILRRY--DVVLVQEVRDSD 66 Query: 79 ---AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + N+ + RD+ +++ R V V+ + Sbjct: 67 LSAVTELLEQLNSVSSSLYDYEISGPLGRDNYKEMYL-FIYRTDVVSVV-----DTYQYE 120 Query: 136 SFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 +R L V K + + L S + + + +L + W Sbjct: 121 DQQDVFSREPFVLRVSAPHSKAEEFVMVPLHS-----APHDAVAEIDALYDVYLAVVNKW 175 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 V GDFN +Y+ +D + +D + + Sbjct: 176 ------GTDNIVFLGDFNADCSYVKQSDWASIRLRSSDVFKWLIPDSADTTVGKSDCAY- 228 Query: 255 IPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 D V+ + ++ S + + + + L SDH P+ + Sbjct: 229 ---DRIVVCGAKLKRSIVPNSATVYNFQHAFQLEQEEALAVSDHYPVEVKL 276 >gi|296169146|ref|ZP_06850802.1| endonuclease/exonuclease/phosphatase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896195|gb|EFG75859.1| endonuclease/exonuclease/phosphatase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 254 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 36/307 (11%), Positives = 76/307 (24%), Gaps = 82/307 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NI + LR + LD D++ LQE+ ++ Sbjct: 1 MRVATFNILHGRTVGDG-----------VELQRLRDCVRRLDPDVLSLQEVDCDQPRSER 49 Query: 84 FP------------KNTWCIFYSTER---LINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 ++ + S + + R+ IA+ + Q Sbjct: 50 ADLTAVAAEAMGAVEHRFVAAISGTPGATWMAATGREQPGTAAYGIALLSRYPVASWQVV 109 Query: 129 PLLGAKDSFS------------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 L F R AV + + V + HL + Sbjct: 110 RLPRIPMRFPMYLPGPNRVMVVDEEPRAAVIAQLRTPMGGLTVANTHLSFVPGWNR---- 165 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + L+ + + P ++ GD N + Sbjct: 166 ------------RQLRRLVHDLRGFPGPRLLTGDLNMTPKTVRRWSGMRAL--------- 204 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ + D + + +SDH Sbjct: 205 ------ASAVTFPADAPDRQLDHILTDDR-------------RLRGGAVAAEPMGISDHR 245 Query: 297 PISIDYD 303 P+ +D + Sbjct: 246 PLVVDLE 252 >gi|238757025|ref|ZP_04618213.1| Exodeoxyribonuclease III [Yersinia aldovae ATCC 35236] gi|238704855|gb|EEP97384.1| Exodeoxyribonuclease III [Yersinia aldovae ATCC 35236] Length = 228 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 25/242 (10%), Positives = 57/242 (23%), Gaps = 47/242 (19%) Query: 91 IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV 150 + H +A+ K + + +D+ RR + + Sbjct: 2 FPLEDVSQHGYHVFYHGQKGHYGVALLTKQEPLAVRRGFPTDEEDA-----QRRIIMADI 56 Query: 151 EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGD 210 + V++ F + + L++++ Q+ + +I GD Sbjct: 57 ATPQGPLTVIN-----GYFPQGESRDHPTKFPAKERFYADLQNYLEQQLSADAQVLIMGD 111 Query: 211 FNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 N L + + + + F Sbjct: 112 LNISPTDLDIGIGEESRKRWLRTGKCSFLPEERAWLERLQNWGLVDTFRAANPDCNQQFS 171 Query: 250 NLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID + Q I D ++ SDH P+ Sbjct: 172 WFDYRSRGFDENRGLRIDLLLASQPLAARCIATGI-------DYDIRSMEKPSDHAPVWS 224 Query: 301 DY 302 ++ Sbjct: 225 EF 226 >gi|206558889|ref|YP_002229649.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia cenocepacia J2315] gi|198034926|emb|CAR50798.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia cenocepacia J2315] Length = 257 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 36/307 (11%), Positives = 84/307 (27%), Gaps = 79/307 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+++ N+N + + + +AD V +QE + + + A Sbjct: 2 MRVITANLNGIRSAAKKGFF---------------DWLGEQNADCVCVQEIKVSADDLPA 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + ++ +S + + +G S Sbjct: 47 EFVEPHGFKSYFHHAEKKGYSGAGVYSRREPDDVI--------------IGFGSSEFDPE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R VE K+ V+ +++ S + + + L + Sbjct: 93 GRY-----VEARYGKLSVVSVYVPSGSSGEERQQAKYRFMAEFMPHLAAL--------KK 139 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD N + + + + + + + D R Sbjct: 140 KREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEEREWLTKLFDDVGYVDVFRTLDPRPE 199 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + S + + SDH P Sbjct: 200 QYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKSASI-----------FKDIKFSDHAP 248 Query: 298 ISIDYDF 304 +++DYD+ Sbjct: 249 LTVDYDY 255 >gi|162452973|ref|YP_001615340.1| endonuclease/exonuclease/phosphatase [Sorangium cellulosum 'So ce 56'] gi|161163555|emb|CAN94860.1| Endonuclease/Exonuclease/phosphatase [Sorangium cellulosum 'So ce 56'] Length = 343 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 36/283 (12%), Positives = 78/283 (27%), Gaps = 42/283 (14%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVA 81 +R+ S+N + L+ + D++ LQE S + Sbjct: 91 DLRVASFNT----------------GSRAMNIDRLKGFVAETRPDVLALQECSASEPELN 134 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 FP + + + H + + + + + +L+ L A S Sbjct: 135 AAFPGWSVHVDTGMCLVSRHPLLKAESRDRRDVWDKGGHGAILRYEIALPDALRPSSEEP 194 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 V L+ ++ + L + E+ + + + W+ + + Sbjct: 195 RGTRVFSLLNLHLETPREAIEALIHGLWKQEAEHDRVIALRAWESELA--RQWVDE---A 249 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 P V+AGDFN ++ + + + ID+ + Sbjct: 250 PYPVVVAGDFNMPVDSAIYRRFWAGFENAFSRAGLGFGATKRTRW------FGVRIDHVL 303 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + SDH PI D + Sbjct: 304 AGPG--------------WTTERAWIGPDLGSDHLPIVADLRW 332 >gi|71280189|ref|YP_268051.1| endonuclease/exonuclease/phosphatase family protein [Colwellia psychrerythraea 34H] gi|71145929|gb|AAZ26402.1| endonuclease/exonuclease/phosphatase family protein [Colwellia psychrerythraea 34H] Length = 410 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 43/367 (11%), Positives = 98/367 (26%), Gaps = 88/367 (23%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++++ ++N+ E ++ + +Y DI+ Q Sbjct: 34 SVSVANTQLKVATFNLFNYLEPPNAYYEFERIYSAEQWAKKQKWVAEYLSEFQPDIIGFQ 93 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP--- 129 E+ S +++ ++ + +++ AIA R V Sbjct: 94 EVFSADSLKELVAAQGY-AYFAVVDQPTVIDDFIYRSPVVAIASRYPITEVAAVKANTEL 152 Query: 130 LLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSL----- 183 + + +R+ + VE+ K +H KS + ++ + Sbjct: 153 AQTLGLANDFSFSRKVIRATVELPHMGKCDCYVVHFKSKRSMIEIDEKKNHWSPEKTIIE 212 Query: 184 ---------------LSQQAQWLK-DWITQKKESLVPFVIAGDFNRKIN----------- 216 +A L D I +++ + P V+ GDFN ++ Sbjct: 213 SLKANVAGGWGSTIQRGSEATLLMIDMIERREATGNPMVLMGDFNNTLDDGVLSHLLTNT 272 Query: 217 ----YLGNNDDFWKTIDPNDSLIR------------------------------------ 236 + D + ND+ Sbjct: 273 LRFVSAIDRDAYLAKYCLNDAWDLLQTAIKNEQHEASKADEDSKNTSDIVEKNDTADTKN 332 Query: 237 --FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD------IKSR 288 +E+ R + + +DY ++ + Y+ D I R Sbjct: 333 SSAREEQIVRTPTHYFGADSSVLDYILLSCEFDASYHDSLYQVSAYDTYDRHLINPIFER 392 Query: 289 GKRLSDH 295 +DH Sbjct: 393 DGESTDH 399 >gi|81428949|ref|YP_395949.1| exodeoxyribonuclease III [Lactobacillus sakei subsp. sakei 23K] gi|78610591|emb|CAI55642.1| Exodeoxyribonuclease III [Lactobacillus sakei subsp. sakei 23K] Length = 254 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 74/302 (24%), Gaps = 78/302 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + DAD LQE A Sbjct: 1 MKFISWNVNGLRAVLKKDFMT---------------TFEQFDADFFCLQETK-MQAGQVE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S A+ K+ + D R Sbjct: 45 LDLPGYHQYFNYAEKKGYSGA----------AIFTKHEPLNVTYGIQQPEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +++ + + + + Q L + Sbjct: 91 -----VITLEYPQFFLITCYTPNSQNQLKRLDYRMTWENAFRAYVQQL--------GTQK 137 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + T+ + F + + Sbjct: 138 PVIFCGDLNVAHEAIDLKNDRTNHKSAGFSDEERVQMTTLLQSGFTDTFRYFYPDQTDIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ L+ +Y SDHCP+ Sbjct: 198 SWWSYRFHARDNNAGWRIDYFITSDELQPKLMDAKIHTEIY-----------GSDHCPVE 246 Query: 300 ID 301 +D Sbjct: 247 LD 248 >gi|126651518|ref|ZP_01723722.1| exodeoxyribonuclease [Bacillus sp. B14905] gi|126591771|gb|EAZ85867.1| exodeoxyribonuclease [Bacillus sp. B14905] Length = 251 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 84/303 (27%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N + G + ++AD +QE ++ Sbjct: 1 MKFISWNVNGIRACLGKGF---------------LDFFHQIEADFFCIQETKCQAGQVEL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + ++ A+ K+ + + G D S+ R Sbjct: 46 ALDDYEQYWNYAQ-----------KKGYSGTAIFTKHTPLSV----MYGVGDEDSQDEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + ++++++ + + L+ Q L S Sbjct: 91 I-----ITLEYQNFYLVNVYTPNAQRDLARLPLRLTWEDRLAGYLQDLN--------SKK 137 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V GD N + + + + + F + + + Sbjct: 138 PVVYCGDLNVAHTEIDLKNAKSNVGNSGFTYEERAKFSELLASGFVDSFRYKHPNETDHF 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ + + Q + + SDHCPI Sbjct: 198 TWWSYMNKVRERNIGWRIDYFIVSEQLKNQIDQATIHPHI-----------MGSDHCPIE 246 Query: 300 IDY 302 + Sbjct: 247 LQL 249 >gi|42518122|ref|NP_964052.1| exodeoxyribonuclease [Lactobacillus johnsonii NCC 533] gi|41582406|gb|AAS08018.1| exodeoxyribonuclease [Lactobacillus johnsonii NCC 533] gi|329666434|gb|AEB92382.1| exodeoxyribonuclease III [Lactobacillus johnsonii DPC 6026] Length = 275 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 89/305 (29%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL+SWNI++L+ + + R+ + K DADI+ +QE + Sbjct: 1 MRLISWNIDSLNAALTSDSPRAQLTRS------VLNTIKEKDADIIAIQETKLRSTGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + S + + KN + + P +GA D+ G Sbjct: 55 KHQEVLAEMFPNYDYVWRSSEEPARKGYAGTMFLYKNTLTPEVTKPTIGAPDTMDYEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V ++ + ++ Q L + Sbjct: 114 -----ILTLEFDNYYVTQVYTPNSGNELKRLEDRQIWDEKYTEYLQKL--------DKSK 160 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + +GD+N + + + F K + Sbjct: 161 PVIASGDYNVAHTPIDLKHPENNHHNAGFTDEERQGFDKLLKLGFTDTFRKVHGNVEGVY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY+++ + + + + DHCPI Sbjct: 221 SWWAQRVRTSKDNNSGWRIDYYIVSDRIADQVTKSEMIDTGDRK-----------DHCPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 MLEIN 274 >gi|288574097|ref|ZP_06392454.1| exodeoxyribonuclease III Xth [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569838|gb|EFC91395.1| exodeoxyribonuclease III Xth [Dethiosulfovibrio peptidovorans DSM 11002] Length = 259 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 32/302 (10%), Positives = 78/302 (25%), Gaps = 70/302 (23%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 + ++N+N S +L ++ + D++ LQE + + Sbjct: 4 TIATFNVN----------------SVRSRLPILERWLNDSKVDVLCLQETKARDE----- 42 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + + + +A+ + + + G D + R Sbjct: 43 -----DFPLQAFVDMGYFVAFRGQKSYNGVAIAS----LEEPDEIVYGFDDGKEPVFDTR 93 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 A+ + IWV++ ++ +D + + + I+ + Sbjct: 94 ALSVRF----GDIWVMNTYVPQGKSIDHDDYLMKQEFLRRT------QRTISDRISDGKR 143 Query: 205 FVIAGDFNRKINYLGNNDD--------FWKTIDPN-----DSLIRFPKEKDSRCNANKNL 251 + GD N + F + I L+ + Sbjct: 144 VLWVGDMNVAPEEKDVANPKNKAKHVCFHRDIRDLFGTVCQGLVDVFRSHRPEEGEFSFW 203 Query: 252 RNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + ID+ + + K ++ SDH P+ Sbjct: 204 DYRVKNALDRNIGWRIDHILASPDLAKLSSDSWV-------YRDPRGWEKPSDHTPVLAS 256 Query: 302 YD 303 +D Sbjct: 257 FD 258 >gi|224069926|ref|XP_002193876.1| PREDICTED: deoxyribonuclease I [Taeniopygia guttata] Length = 284 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 33/287 (11%), Positives = 79/287 (27%), Gaps = 30/287 (10%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78 A +++ ++NI ++ + ++ DIV +QE+ + Sbjct: 20 ATTLKIGAFNIKAFG---------DTKMSNQTVANIIISVLSEY--DIVLVQEVRDADMS 68 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 AV + + + L++ ++ R V VL Y G + + Sbjct: 69 AVNYLMDQLNSAGKHPYSSLVSVPLGRTSYKEQYLFIYRSDMVSVLGSYYYDDGCESCGN 128 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + +R + ++ + +L + W Sbjct: 129 DSFSREPFIVKFSSPTTQVQEFVLVPLHSEPSH----AAQEIDALYDVYTDVINKW---- 180 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + GDFN +Y+ ++ + + + A+ + D Sbjct: 181 --GTNDMIFLGDFNAGCSYVTSSQWPSIRLRSLPACEWLIPDSADTTVADTDCAY----D 234 Query: 259 YFVMDQ-NAYKFLIQESFSEILY--NEDDIKSRGKRLSDHCPISIDY 302 V + S + + +SDH P+ + Sbjct: 235 RIVACGTALRQGTEPGSATINNFQQKFHLQMKDALAVSDHFPVEVTL 281 >gi|78047637|ref|YP_363812.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325927635|ref|ZP_08188864.1| Exodeoxyribonuclease III [Xanthomonas perforans 91-118] gi|78036067|emb|CAJ23758.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325542002|gb|EGD13515.1| Exodeoxyribonuclease III [Xanthomonas perforans 91-118] Length = 331 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 75/301 (24%), Gaps = 71/301 (23%) Query: 21 AQKVR-LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + +R + ++N+N ++ L ++ + DIV LQE+ S A Sbjct: 2 SGTLRKIATFNVNGIAS----------------RLPHLLEWLQREQPDIVGLQELKSTQA 45 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 R + +A+ + ++ L Sbjct: 46 A----------FPEQAIRDAGYGVIWQGEKSWNGVALLARGTEPVEIRRGLPWD------ 89 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R +E + V ++L + + Y + + L Sbjct: 90 --PRDTQSRYLEAAIHGVVVACLYLPNGNPQPGPKFDYKLA------WFERLIRHAKTLV 141 Query: 200 ESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSR 244 + P + GDFN D ++T+ Sbjct: 142 DLPHPVALIGDFNVVPTDADIYDPKGWRKDALLQPESREAYQTLLAQGWTDSLLAIHGHT 201 Query: 245 CNANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + ID+ ++++ L D ++ SDH Sbjct: 202 PIYTFWDYFRQHFARDRGLRIDHLLLNRTLAPDLQDAGV-------DKWVRALEKASDHA 254 Query: 297 P 297 P Sbjct: 255 P 255 >gi|45358575|ref|NP_988132.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis S2] gi|44921333|emb|CAF30568.1| exonuclease III [Methanococcus maripaludis S2] Length = 249 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 32/303 (10%), Positives = 78/303 (25%), Gaps = 77/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++SWN+N + + + DI+ +QE + Sbjct: 1 MKMLSWNVNGIRACLKNGFM---------------NFLERESPDIMCIQETKVQSG-QVQ 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ +S I + G ++S R Sbjct: 45 LGLDGYFQYWNYAERKGYSGTAIFTKIKPNNVIL--------------GMENSEHNNEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++++++ + + + L+ + Sbjct: 91 -----VITLEFDEYYLVNVYTPNSQRGLTRLEYRQKWDEDFLSYIKTLE--------TKK 137 Query: 204 PFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCN-------ANK 249 P V GD N + + + + N Sbjct: 138 PVVFCGDLNVAHKEIDLKNPKTNVKNAGFTPEERNGFDNIVNSGFLDTFREFNNEPDNYS 197 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF + ++ L D SDHCP+ I Sbjct: 198 WWSYRFNARARNIGWRIDYFCISKSLRNNLK-----------DAYIMPEVMGSDHCPVGI 246 Query: 301 DYD 303 ++ Sbjct: 247 IFE 249 >gi|312863077|ref|ZP_07723315.1| exodeoxyribonuclease III [Streptococcus vestibularis F0396] gi|322516276|ref|ZP_08069206.1| exodeoxyribonuclease [Streptococcus vestibularis ATCC 49124] gi|311100613|gb|EFQ58818.1| exodeoxyribonuclease III [Streptococcus vestibularis F0396] gi|322125249|gb|EFX96622.1| exodeoxyribonuclease [Streptococcus vestibularis ATCC 49124] Length = 275 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 81/305 (26%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + R + +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLSR------AVIDTLVAENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ S + + K +YP +GA + G Sbjct: 55 KHLQILEDYFPDYVNTWRSSVEPARKGYAGTMFLYKKELTPIITYPEIGAPSTMDCEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V ++ + + L ++ Sbjct: 114 -----IITLEFANFFVTQVYTPNAGDGLKRLLERQIWDEKYADYLAKL--------DAQK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + + A Sbjct: 161 PVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERAGFTNLLAKGFTDTYRHLNGDVTGAY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + D I S ++ DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVT---------KSDMINSGDRQ--DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 VLEID 274 >gi|189466215|ref|ZP_03015000.1| hypothetical protein BACINT_02585 [Bacteroides intestinalis DSM 17393] gi|189434479|gb|EDV03464.1| hypothetical protein BACINT_02585 [Bacteroides intestinalis DSM 17393] Length = 370 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 33/290 (11%), Positives = 86/290 (29%), Gaps = 47/290 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+ + T + +Y K + D++ QE G Sbjct: 111 LKVATYNVGNFGT-----------EITGYSCKEIARYMKQQEVDVLCFQEFGDNQH---- 155 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP ++ +S R DS IA+ + + + + + + Sbjct: 156 FPMDSIRNVFSHWRYALIPTEDS-ISGVLPIAIFSRYPLINPRFISYPQSANCSMQCDII 214 Query: 144 RAVE-LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD-WITQKKES 201 + + + N + ++ + + + + N ++ L D ++ + +++ Sbjct: 215 LGRDTVRLLNNHLQTTSVNQNRRKWERGLNNTNDTRREVEVVQGAINTLHDNFVKRAEQT 274 Query: 202 L----------VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 V+ GDFN + + + F + Sbjct: 275 DSIRQLALASPYSVVVCGDFNSLPSSYT-YAELSDILKDG-----FRTSGRGYMYTFRYF 328 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + + IDY + ++ SDH P+ ++ Sbjct: 329 KRLLRIDYIFHSPAIQGYRYYSPDLDLC-------------SDHNPVLME 365 >gi|93005871|ref|YP_580308.1| endonuclease/exonuclease/phosphatase [Psychrobacter cryohalolentis K5] gi|92393549|gb|ABE74824.1| Endonuclease/exonuclease/phosphatase [Psychrobacter cryohalolentis K5] Length = 341 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 36/318 (11%), Positives = 80/318 (25%), Gaps = 49/318 (15%) Query: 26 LVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + + N+ + + + ADI+ +QE+ A+ Sbjct: 14 IATANLLNFANPNRLYYPNAPAYTNHEYEHKLRGITYLLSKAHADIIAVQEVWDSEALEA 73 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIH-------TAIAVRKKN------VRVLQQSYP 129 + + + L ++ +S + I R + ++ ++ Sbjct: 74 LAVSLGFKPEHVVIPLASNDSVNSYTQGNGAQNTPAVGIISRFAHLETSLLEEIVPKAVI 133 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-------------DSLENT 176 + + R NR + L V+ G+ I ++ HLKS D Sbjct: 134 DIPDVGPYQR-FNRPPLVLRVDAFGQPITIITAHLKSKRAFFLRDEAGNLLEDMDDPNIR 192 Query: 177 YSPSCSLLSQQAQWLK----DWITQKKESLVPFVIAGDFNRKINY------------LGN 220 L +A I + + + P ++ GD N + Sbjct: 193 IRAKLRSLCMRAAEAASIRLSIIDRLQHTREPLILLGDMNDVTESVTTQLMTETGEVNYD 252 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE---SFSE 277 + + + ID + + Sbjct: 253 KSMRDVALFDAARIQARYGWMKDVAYTHIYQGMPEVIDQLFVSEEFLPDSKFSLGQVERV 312 Query: 278 ILYNEDDIKSRGKRLSDH 295 +N+ R+ DH Sbjct: 313 DYFNDHLKWDYADRVIDH 330 >gi|315223362|ref|ZP_07865221.1| exodeoxyribonuclease III [Capnocytophaga ochracea F0287] gi|314946693|gb|EFS98682.1| exodeoxyribonuclease III [Capnocytophaga ochracea F0287] Length = 254 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 84/303 (27%), Gaps = 73/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +S+N+N + ++ K+ + D++ LQE+ + Sbjct: 1 MKTISYNVNGIRAALTKGF---------------AEWLKSANPDVLCLQEIKATED---- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 +S + ++ +A+ K + +G + R Sbjct: 42 ---QIPTEVFSELGYKYQYYHSAEKKGYSGVAILSKIEP----KHVEVGTGIDYMDKEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + + V+ ++L S D K +I + K+ + Sbjct: 95 -----VLRADFETLSVMSLYLPSGTNPD--------RLDFKLTFMADFKKYIDKLKQKVP 141 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249 VI GD+N + +D I + + Sbjct: 142 NLVICGDYNICHEAIDIHDPIRNANVSGFLPIEREWLDKFMKSGFIDSFRYFHKEAHQYS 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY ++ + + + SDHCPI + Sbjct: 202 WWSYRANARNNNKGWRIDYHLVSTPLENRMERALIL-----------PEAKHSDHCPILL 250 Query: 301 DYD 303 + Sbjct: 251 IIN 253 >gi|322433843|ref|YP_004216055.1| Endonuclease/exonuclease/phosphatase [Acidobacterium sp. MP5ACTX9] gi|321161570|gb|ADW67275.1| Endonuclease/exonuclease/phosphatase [Acidobacterium sp. MP5ACTX9] Length = 1139 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 36/352 (10%), Positives = 87/352 (24%), Gaps = 71/352 (20%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVS------------------------------LWK 44 T + + + S+NI Sbjct: 493 AVTLPASNEFTVASFNIERFYNTSSADDLYYVPAGVNGYNGSSGTAIVSTGQTFISEAAD 552 Query: 45 NSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNAVAKVFPKNTWCI-----FYSTER 97 N+ T L + + D+V ++E+ + + + + + + Sbjct: 553 NTPAAYARRLTKLSLAIRTVLNSPDVVTIEEVENQSVANDIAAQINSDAGVTNLYTAFST 612 Query: 98 LINHSKRDSNNDIHTAIAVRKKNVRV------LQQSYPLLGAKDSFSRAGNRRAVELLVE 151 I ++ + +++ + + ++ Sbjct: 613 DNKTYYTQDGTGISVGFLIKNTVDNLGVTQYGAGETFTPTSGSLTTLNDRPWLVLSAGIK 672 Query: 152 ----INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207 + I V+ H+K+ S + L QA+ + +I ++ + + Sbjct: 673 RAAGVKDYPITVVVNHMKALTGQSSATTNSTRLKKEL--QAEDIAKFIQTQQAAGKHVIS 730 Query: 208 AGDFNRKINYLGNNDDFWKTIDPN------------------DSLIRFPKEKDSRCNANK 249 GDFN G ND + N ++ + Sbjct: 731 GGDFNAFEFSDGYNDTLGTYTNTNVLPATQVLQPGVAGLVTPPLTDLALTIPAAQRWSYV 790 Query: 250 NLRNKIPIDYFVMDQNA----YKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ V+ F ++ + + R SDH P Sbjct: 791 EDGSAQILDHMVVTPELVAAGAHFAYGHLNADFPLTAYNDATTAARNSDHDP 842 >gi|298528123|ref|ZP_07015527.1| exodeoxyribonuclease III [Desulfonatronospira thiodismutans ASO3-1] gi|298511775|gb|EFI35677.1| exodeoxyribonuclease III [Desulfonatronospira thiodismutans ASO3-1] Length = 254 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 78/303 (25%), Gaps = 77/303 (25%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVAKV 83 + SWN+N G W + ++ + D++ LQE + AK Sbjct: 3 IYSWNVNGFRAVTGKGFW---------------DWFQDRNIDVLCLQETKAHPDQLPAKD 47 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + I+++ R+ ++ A + Y G R Sbjct: 48 KEVSGYNIYWNPARIK---------KGYSGTACFYRLEP----QYISTGLPQEHLNGEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++ +++ + + AQ L+ Sbjct: 95 MILM-----EYESFYLFNVYFPNGQMSHERLKFKLNYYDRFLEYAQDLRR--------KK 141 Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P V+ GDFN + K ID ++ Sbjct: 142 PIVVCGDFNTAHKDIDLKNPRANEDRSGFLPVERQWLDKFIDHGYVDTFRMFNQEGGNYT 201 Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 R IDYF + + + SDHCP+ + Sbjct: 202 WWTYRFGARSRNAGWRIDYFFVSEELRSNVQNAWIE-----------PQVMGSDHCPVGL 250 Query: 301 DYD 303 + Sbjct: 251 KLN 253 >gi|71065887|ref|YP_264614.1| endonuclease/exonuclease/phosphatase family protein [Psychrobacter arcticus 273-4] gi|71038872|gb|AAZ19180.1| possible endonuclease/exonuclease/phosphatase family protein [Psychrobacter arcticus 273-4] Length = 341 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 73/317 (23%), Gaps = 47/317 (14%) Query: 26 LVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + + N+ + + + ADI+ +QE+ A+ Sbjct: 14 IATANLLNFANPNRLYYPNAPAYSNHEYEHKLRGITDLLSKAHADIIAVQEVWDSEALIA 73 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIH-------TAIAVRKKNVRVLQQSYPLLG--- 132 + + + L ++ I R ++ L Sbjct: 74 LAVSLGFKPEHVVIPLASNDSASPYTQGKGAQNTPAVGIISRFAHLESRLLEDILPKAII 133 Query: 133 --AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-------------DSLENTY 177 + NR + L V+ G+ I ++ HLKS D Sbjct: 134 NIPDIGPYQRFNRPPLVLRVDAFGQPITIITAHLKSKRAFFLRDEAGNLLEDMDDPNIRI 193 Query: 178 SPSCSLLSQQAQWLK----DWITQKKESLVPFVIAGDFNRKINY------------LGNN 221 L +A I + + + P ++ GD N + Sbjct: 194 RAKLRSLCMRAAEAASIRLSIIDRLQHTREPLILLGDMNDVTESVTTQLMTETGEVNYDK 253 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE---SFSEI 278 + + + ID + + Sbjct: 254 SMRDVALFDAARIQARYGWMKDVAYTHIYQGMPEVIDQLFVSEEFLPDSKFSLGQVERVD 313 Query: 279 LYNEDDIKSRGKRLSDH 295 +N+ R+ DH Sbjct: 314 YFNDHLKWDYADRVIDH 330 >gi|326331009|ref|ZP_08197308.1| exodeoxyribonuclease III [Nocardioidaceae bacterium Broad-1] gi|325951220|gb|EGD43261.1| exodeoxyribonuclease III [Nocardioidaceae bacterium Broad-1] Length = 260 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 33/301 (10%), Positives = 68/301 (22%), Gaps = 65/301 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WNIN S + + + D++ LQE + Sbjct: 1 MRIATWNIN----------------SIRSRIDRVEAFVERHSIDVLALQETKAKPD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 I + D +A+ + + + Sbjct: 41 ------QIPTMGLEARGYEVASVGYDQWNGVALISRVG------LSDIQVGFEGMPSFKD 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + + V +++ + D Y + L+ T + Sbjct: 89 VAEARALTATCGGVRVTSVYVPNGRKPDDPHYAYK------LEWLAALQKAATAWYDG-- 140 Query: 204 PFVIAGDFNRKINYLGNNDDFW-------------KTIDPNDSLIRFPKEKDSRCNANKN 250 P + GD+N D + A Sbjct: 141 PSAMVGDWNVCPFDEDCFDPKQFVGKTHLTPAERDAFFAIEKDFKDVVRPFVPGPEAYTY 200 Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 ID+ + + + +E + SDH P+ +D Sbjct: 201 FDYYRQRFERNRGLRIDFVLGSPSFASRVTDAFVD---LDERNPAIGTGAPSDHAPVIVD 257 Query: 302 Y 302 Sbjct: 258 L 258 >gi|227889124|ref|ZP_04006929.1| exodeoxyribonuclease III [Lactobacillus johnsonii ATCC 33200] gi|227850353|gb|EEJ60439.1| exodeoxyribonuclease III [Lactobacillus johnsonii ATCC 33200] Length = 275 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 89/305 (29%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL+SWNI++L+ + + R+ + K DADI+ +QE + Sbjct: 1 MRLISWNIDSLNAALTSDSPRAQLTRS------VLNTIKEKDADIIAIQETKLRSTGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + S + + KN + + P +GA D+ G Sbjct: 55 KHQEVLAEIFPNYDYVWRSSEEPARKGYAGTMFLYKNTLTPEVTKPAIGAPDTMDYEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V ++ + ++ Q L + Sbjct: 114 -----ILTLEFDNYYVTQVYTPNSGNELKRLKDRQIWDEKYTEYLQKL--------DKSK 160 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + +GD+N + + + F K + Sbjct: 161 PVIASGDYNVAHTPIDLKHPENNHHNAGFTDEERQGFDKLLKLGFTDTFRKVHGNVEGVY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY+++ + + + + DHCPI Sbjct: 221 SWWAQRVRTSKDNNSGWRIDYYIVSDRIADQVTKSEMIDTGDRK-----------DHCPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 MLEIN 274 >gi|85712710|ref|ZP_01043755.1| Uncharacterized conserved secreted protein [Idiomarina baltica OS145] gi|85693442|gb|EAQ31395.1| Uncharacterized conserved secreted protein [Idiomarina baltica OS145] Length = 397 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 40/391 (10%), Positives = 98/391 (25%), Gaps = 88/391 (22%) Query: 1 MIRKYVLALVFFLV-PCTASVAQKVRLVSWNI-----NTLS----EQEGVSLWKNSVKRT 50 M +V +L+ + + VR+ ++N+ N L S+ ++ Sbjct: 4 MRSIFVFSLLLIMTYSNFSLAQDSVRIATFNVSMDSSNHLPNSELPNTHASVLPRVLQEN 63 Query: 51 TSDYTLLRQYAKNLDADIVFLQEMG------------------SYNAVAKVFPKNTWCIF 92 + + + + + DI+ L E S N + + + Sbjct: 64 NAQIRGIAEIIQRVRPDIILLNEFDYVPQEQGIDVFLNSYLGESQNNLKPISYPYVYTAP 123 Query: 93 YS--------------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------------- 125 + N + + + K + + Sbjct: 124 VNTGSPSAFDLNRDGKATGRGNDAWGFGWYPGQYGMVILSKYPILREQIRTFQHFLWKDM 183 Query: 126 --QSYPLLGAKDSFSRAGN--------------RRAVELLVEINGKKIWVLDIHLKSFCF 169 P + ++ + ++ V+I GK + VL H F Sbjct: 184 PGHHVPYVHDEEGKPTNEPWYSDEAMAQYPLSSKSHWDVPVQIGGKVVHVLAQHPTPPAF 243 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV----------PFVIAGDFNRKINYLG 219 + + +L FV+ GD N + G Sbjct: 244 DGPENRNGMKNYDEIRFVRDYLTPGADNYIYDDQGQRGGIAANGSFVVLGDLNAQAGASG 303 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNA-------NKNLRNKIPIDYFVMDQNAYKFLIQ 272 + + ++ P + ++ + +DY + + Sbjct: 304 VDGAMTQLLEHPRVNDVMPMSEGGANHSPDIEGSKYHTAAWRKRVDYVLPSDDLIVKDAG 363 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ++ + SDH + +D + Sbjct: 364 IFWPVQGEPGYELMKKRDASSDHRLVWLDIE 394 >gi|157826086|ref|YP_001493806.1| exodeoxyribonuclease III [Rickettsia akari str. Hartford] gi|157800044|gb|ABV75298.1| Exodeoxyribonuclease III [Rickettsia akari str. Hartford] Length = 260 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 86/303 (28%), Gaps = 69/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + LLR + + DI+ LQE+ Sbjct: 1 MKIATWNIN----------------SIKTRLNLLRNFLSQENPDILLLQEIKCKTE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ + +A+ K + +++ R Sbjct: 41 ------NFPFDELSDLPYNFYVHGQQSYNGVAIISKFP----ADEIIKDFPNNYCSDQAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E+ + + ++ ++ + F+ S + + ++++ KK Sbjct: 91 F-LEIKLSLPIGFCNIISLYAPNGSFVGSDKFVAKLAF------YDNFINYLSTKKSFDE 143 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 +I GD N + +TI + S+ A Sbjct: 144 KTIIGGDLNIAPFDIDVYSPKILSETTCFTEVEQKKLRTILNAGFEDLYRLMHPSK-QAF 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ID + N +L D ++ SDH P+ Sbjct: 203 SWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYM-------DYNLRTQEKPSDHIPVI 255 Query: 300 IDY 302 + Sbjct: 256 ASF 258 >gi|331002672|ref|ZP_08326187.1| exodeoxyribonuclease [Lachnospiraceae oral taxon 107 str. F0167] gi|330407085|gb|EGG86589.1| exodeoxyribonuclease [Lachnospiraceae oral taxon 107 str. F0167] Length = 262 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 80/307 (26%), Gaps = 78/307 (25%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A+ +++SWN+N L + +++DADI +QE + Sbjct: 9 AKTKKMISWNVNGLRAAVTKGF---------------LDFFRDIDADIFCIQE-SKLSEG 52 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + +++ + ++ +AV K+ + + D+ R Sbjct: 53 QIELDLPGYYDYWN----------YAAKKGYSGVAVFTKDKPIGVTYGIGIEEHDNEGR- 101 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 ++ +++ + + + + L++ Sbjct: 102 --------VITAEYDDFYLITCYTPNSQRGLTRLDYRMAWEDAFLDYVLKLEE------- 146 Query: 201 SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 P + GD N + + F + Sbjct: 147 -KKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKMDIVLSSGFADSFRVLYPDKE 205 Query: 246 NANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 A IDYF++ + + + SDHC Sbjct: 206 GAYSWWSYMGGARAKNVGWRIDYFIVSDKLKDRIKEAKIHSDIL-----------GSDHC 254 Query: 297 PISIDYD 303 P+ +D + Sbjct: 255 PVELDIE 261 >gi|294674138|ref|YP_003574754.1| endonuclease/exonuclease/phosphatase family protein [Prevotella ruminicola 23] gi|294472322|gb|ADE81711.1| endonuclease/exonuclease/phosphatase family protein [Prevotella ruminicola 23] Length = 311 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 30/256 (11%), Positives = 63/256 (24%), Gaps = 31/256 (12%) Query: 66 ADIVFLQEMGSYNAVAKV-FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 D+V L E+ + + + Y + +R + + A A Sbjct: 70 PDLVALCEVENDSVMRDFTRRSLLRHAGYQYLMTSSPDERGIDVALLYAPASFAPIRSYA 129 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + P+ G R + E ++G + V +H S + + + + Sbjct: 130 IRVNPVEG------MRVTRDILYACGETVSGDTLHVFVVHQPSKFGGEKHSRPFRLAVAD 183 Query: 184 LSQQ-AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 Q ++ ++AGDFN + K + Sbjct: 184 RLCQSIDSIRA-----ISPDAKLMVAGDFNDGALSPSLLQYEQHGLVNLTKH---AKGAN 235 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE--------------ILYNEDDIKSR 288 + ID+ + + + Sbjct: 236 GVRGTYRYKGEWESIDHILGSSSINNKVDTAFIHAPKFLLEEDARYGGYRPRRTYIGPRY 295 Query: 289 GKRLSDHCPISIDYDF 304 SDH P+ + F Sbjct: 296 QGGFSDHLPLVVRLIF 311 >gi|282878286|ref|ZP_06287082.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] gi|281299704|gb|EFA92077.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] Length = 359 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 39/356 (10%), Positives = 91/356 (25%), Gaps = 71/356 (19%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRL---VSWNINTLSEQEGVSLWKN-----------S 46 M + ++L + + S K + +N L + + Sbjct: 11 MKKLFMLLGLLVVGFMAISGQDKYSVYAVGFYNQENLFDTCHDEGKNDYDFLPNGSYKWD 70 Query: 47 VKRTTSDYTLLRQYAKNLDADI--------VFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + T+ + + ++ D+ + L E+ + + + + Sbjct: 71 GLKYTNKLRNMARALADMGTDVLPNVGCALIGLSEVENARVLDALVA---QEPLAARGYR 127 Query: 99 INHSKRDSNNDIHTAIAVRKKNVR-VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 H + I A+ + + + P + + S R + + + G + Sbjct: 128 YIHVEGPDRRGIDCAVLYNPQLFKPASVKLVPYVQPLEKDSAYFTRGFLTVTGTMGGDHV 187 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 + H S S + + Q + +KD + Q + ++ GD N Sbjct: 188 AAIVCHWPSRYSG-------SFYREVAAAQVKAIKDSLLQ-LDPATKVMVMGDMNDDP-- 237 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK----------NLRNKIPIDYFVMDQNAY 267 N + + + N D V+ N Sbjct: 238 --VNKSMAEVLSAKAEIDDVGDGDMYNPWYNILANHGRGTLMYQGGWNLFDQIVLSPNML 295 Query: 268 KFLIQESFSEILYNEDDIKSRGK-----------------------RLSDHCPISI 300 + +S + Y + I SDH P+ + Sbjct: 296 NQNGKRDYSSLKYWKGQIVRYDYLIQSTGKYKGAPKRTTAGGVWLNGYSDHLPVVV 351 >gi|227512799|ref|ZP_03942848.1| exodeoxyribonuclease III [Lactobacillus buchneri ATCC 11577] gi|227083999|gb|EEI19311.1| exodeoxyribonuclease III [Lactobacillus buchneri ATCC 11577] Length = 252 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 32/301 (10%), Positives = 73/301 (24%), Gaps = 78/301 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + + LDAD +QE Sbjct: 1 MKFISWNVNGLRAVVKKDF---------------AEIFQKLDADFFCIQETKMQEG-QLK 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S + PL + + + Sbjct: 45 LDLPGYRQYFNYAERKGYSGTAIF-----------------AKDEPLTVSYGIQAPEFDH 87 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E +++ ++ + + L +S Sbjct: 88 EGRAITLEYPN--FYLVTSYVPNSGAKLKRLDFRMGWDKAFHAYLNQL--------DSHK 137 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F + + Sbjct: 138 PVILCGDLNVAHYEIDLKNPQSNHHNAGFTDEERQSFTKLLDQGFMDTFRHFYPDKEDIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV + + ++ SDHCP+ Sbjct: 198 SWWSYRFHSRDRNAGWRIDYFVTSKRLADHISDSKILTDIF-----------GSDHCPVE 246 Query: 300 I 300 + Sbjct: 247 L 247 >gi|284799781|ref|ZP_05984844.2| endonuclease/exonuclease/phosphatase family protein [Neisseria subflava NJ9703] gi|284797131|gb|EFC52478.1| endonuclease/exonuclease/phosphatase family protein [Neisseria subflava NJ9703] Length = 249 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 36/256 (14%), Positives = 81/256 (31%), Gaps = 37/256 (14%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMG----SYNAVAKVFPKNTWCIFY-STERLINHSKRD 105 + L +D++FLQE+ + + + I S + ++ K Sbjct: 11 KVQVNRMADALGALGSDVLFLQEVQGQHLNRSRRTDFPDAPHYDIIGDSLDYHRSYGKNA 70 Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 H A+ + + + + S ++ R + V G + ++ + + Sbjct: 71 VYPKRHHGNAILSRLPLKTENNLNI-----SVNKLEQRGLLHCEVVPEGWEDPLVCLCVH 125 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 +Q + + D++ + P +IAGDFN + + Sbjct: 126 LNLREPD-----------RLKQYRAISDYVGRYIRPESPLIIAGDFNDW--RQKSARELG 172 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 +D N+ F R + + +D +++ +E Sbjct: 173 SALDLNE---VFVDNTGKRPKTFPSRLPILSLDRIYTRN-----------LDVIDSEIHN 218 Query: 286 KSRGKRLSDHCPISID 301 + LSDH P+S+ Sbjct: 219 SKDWQHLSDHLPLSVT 234 >gi|240278580|gb|EER42086.1| endonuclease/exonuclease/phosphatase [Ajellomyces capsulatus H143] Length = 299 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 37/295 (12%), Positives = 74/295 (25%), Gaps = 23/295 (7%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+++ NI + K R L ++ + + LQE+ Sbjct: 8 PIRILTHNIRY-ATSAPFRGEKPWKDRKQRLLNELHYHSCHNPETFICLQEVLHVQLNDI 66 Query: 83 VFPKNT-----------WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + N W + S A+ ++ V P + Sbjct: 67 LSGLNPSTSTSTGATTEWAYIGVGRDDGKQAGEYSPIFYRPAVWELEEFKTVWLSETPSV 126 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + + R + + + VL + D + + L+ A Sbjct: 127 P-SRGWDASSIRIVTIGVFKHLVSRKRVLGMSTHL---DDQGSKSRYEAAKLILTMANLY 182 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW---KTIDPNDSLIRFPKEKDSRCNAN 248 ++ +AGDFN + N + +D + + Sbjct: 183 LTKNRLASRNINGIFLAGDFNSEENQEAYRVLTAVDSQFVDAQKQVDTALRYGSENTYTG 242 Query: 249 KNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + + E + G SDH + D Sbjct: 243 FGYEDEGPKRIDYVLFGPKHG--VNPAWSVEGYAVVPNKFDDGVLNSDHRAVVAD 295 >gi|313496499|gb|ADR57865.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida BIRD-1] Length = 284 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 37/292 (12%), Positives = 83/292 (28%), Gaps = 58/292 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 ++RL+S+NI E + + + + + D D+V L Sbjct: 28 PEDGRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHNGRAVNLQKIGRLLG--DFDLVAL 85 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE + + + R+ + V + L + +PL Sbjct: 86 QEADGGSLRSGYVNQVEHLAHLGAFPYWYQQLNRNLGRFAQHSNGVLSRLKPQLLEDHPL 145 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G R A+ + + V+ +HL + Q + Sbjct: 146 PGPAG-------RGAILVRFGEGEDALIVVMMHLALG-------------AKTRALQLGY 185 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 +++ I V+ GD N L + + + + + Sbjct: 186 IRELIGGY----RHQVLMGDMNTHATDLLEHSPL-RDLGLVAPQVEAT---------FPS 231 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + +D+ ++ + ++ I SDH P++++ Sbjct: 232 WRPQRCLDHILLSSSLTLERVEVLAQPI--------------SDHLPVAVEI 269 >gi|149195689|ref|ZP_01872746.1| hypothetical protein LNTAR_17393 [Lentisphaera araneosa HTCC2155] gi|149141151|gb|EDM29547.1| hypothetical protein LNTAR_17393 [Lentisphaera araneosa HTCC2155] Length = 286 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 45/320 (14%), Positives = 96/320 (30%), Gaps = 53/320 (16%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 + K++L L++ + C A+ V+++++N+ + + + Sbjct: 1 MYKFLL-LLYVTLSC---GAESVKIITYNVLYGFNHG-------------KNIQEGQAWL 43 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 K AD + LQEM ++A TW +S H +A + Sbjct: 44 KAQQADFIALQEMKGFDANKFAQLAKTWGHEHSYFYKRPHGMP---------LAFSSRFP 94 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + G K F + R +++ + +++ L S Sbjct: 95 ISEVEELH-KGVKRGFLKLKCRGIDFIVLHMTSQRLSARRQELNYISPTISELLKKKGKV 153 Query: 182 SLL----------SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW------ 225 +L + L D + + + + D N I + +D Sbjct: 154 IVLGDFNSLSPRDMKHLSELDDLLEEMRNTPRKKPNLNDNNFDIGIMTAFEDLGLVELCH 213 Query: 226 KTIDPNDSLIRFPKEKDSRCNANK--NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + L NK + ID+ + S + Sbjct: 214 QQLQGQKDLQGSFPSTLLEKIPNKEIQEKYLRRIDFIL--------SDAISAKNLSQAAI 265 Query: 284 DIKSRGKRLSDHCPISIDYD 303 + +++SDH PI I+ + Sbjct: 266 PKEGDLEKISDHYPIIIELN 285 >gi|91776834|ref|YP_546590.1| exodeoxyribonuclease III (xth) [Methylobacillus flagellatus KT] gi|91710821|gb|ABE50749.1| exodeoxyribonuclease III (xth) [Methylobacillus flagellatus KT] Length = 257 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 79/307 (25%), Gaps = 80/307 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VA 81 +R++S N+N + + + + ADIV LQE+ + A A Sbjct: 2 LRIISLNLNGIRSAASKGFYP---------------WMQEQHADIVCLQELKAQEADMTA 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + ++ +S + + +G + + Sbjct: 47 EMLQPEGYYGYFHYADKKGYSGVGIYSRKKADAVI--------------VGLGMADIDSE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R +E + V+ ++L S + + + + L Sbjct: 93 GRY-----LEARYDNLSVVSLYLPSGSSGEERQAFKFSVMARFMPHLESL-------IRD 140 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 VI GD+N + + Sbjct: 141 GRDVVICGDWNIAHQEADLKNWRGNRKNSGFLPEERAWLTDLFGRVGWVDVYRLLHPDTT 200 Query: 246 NA-NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 +A N+ IDY V + S + R SDH Sbjct: 201 DACYTWWSNRGQAWAKNVGWRIDYQVATPALAARAVSASI-----------YKDARFSDH 249 Query: 296 CPISIDY 302 P+ +DY Sbjct: 250 APLIVDY 256 >gi|325915362|ref|ZP_08177679.1| Exodeoxyribonuclease III [Xanthomonas vesicatoria ATCC 35937] gi|325538409|gb|EGD10088.1| Exodeoxyribonuclease III [Xanthomonas vesicatoria ATCC 35937] Length = 346 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 36/297 (12%), Positives = 76/297 (25%), Gaps = 72/297 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 ++ ++N+N + + L ++ DIV LQE+ A + F Sbjct: 7 KIATYNVNGIGS----------------RLSHLLEWLTREQPDIVGLQEL---KATQEAF 47 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 P+ R + +A+ + ++ L Sbjct: 48 PE-------QAIRDAGYGVIWQGQRAWNGVALLARGTDPIEIRRGLPWDPSDTQSRYLEA 100 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 A+ + V ++L + + Y + Q L P Sbjct: 101 AIH--------GVVVACLYLPNGNPQPGPKFDYKLA------WFQRLIRHAKTLVGLPHP 146 Query: 205 FVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 + GDFN D + ++ + D+ Sbjct: 147 VALIGDFNVVPTDADIYDPKGWRKDALLQPESRQAYQTLVEQGWTDSLLAVYGDAPIYTF 206 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ ++++ L+ D ++ SDH P Sbjct: 207 -WDYFRQHFARDRGLRIDHLLLNRALAPGLLDAGV-------DKWVRALEKASDHAP 255 >gi|227495472|ref|ZP_03925788.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436] gi|226831019|gb|EEH63402.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436] Length = 1795 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 46/345 (13%), Positives = 91/345 (26%), Gaps = 77/345 (22%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD--------------------- 53 P +V V++ ++N+ G K + +D Sbjct: 1285 PAVPAVTGDVKVATFNVLNYFTDLGEDQVKCKSYKDRNDNPVGTDKCAVRGAYTKAAFAD 1344 Query: 54 -YTLLRQYAKNLDADIVFLQEMGSYN---------------AVAKVFPKNTWCIFYSTER 97 + LDADI+ L+E+ + A+ + TW S Sbjct: 1345 QKAKIVSAISLLDADIISLEEIENSQRFGHDRDATLEDLVAALNEKMGAGTWKAVASPAN 1404 Query: 98 LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN---RRAVELLVEING 154 + N + + I TA + V+ +S L + + + N Sbjct: 1405 IPN-----NGDAIRTAFIYKPAKVKAEGESLILDHPDFTGVARSPLAQKFVPVVDERHNA 1459 Query: 155 KKIWVLDIHLKS------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208 K ++ H KS + + + L + + + VP + Sbjct: 1460 KPFVLIVNHFKSKGSVAKGHGEQEGDFDGQGNNNPLRVKQAAALAEFAKANFAEVPTFLL 1519 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 GDFN ++ ++ +D+ + ++ A Sbjct: 1520 GDFNAYSKEDPI----------VTLGNAGFEKLTGEGHSYVFKGRSGSLDHVLANEGAKA 1569 Query: 269 FLIQESFSEILYN----------------EDDIKSRGKRLSDHCP 297 + N D ++ R SDH P Sbjct: 1570 LVSDTGVKVWEINAHEPVMLEYARRNYNVVDFFRADQWRSSDHNP 1614 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 45/342 (13%), Positives = 83/342 (24%), Gaps = 70/342 (20%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLW---------------------KNSVKRTTSD 53 +V V++ ++N+ G S + + Sbjct: 636 ATAPAVNGDVKIATYNVLNYFVHLGKDRNCQFYTDRHGNPVSSKSCSVRGAYSQEAFDNQ 695 Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAV--AKVFPKNTWCIFYSTERLINHSKRD------ 105 + L AD+V L+E+ + + F + Sbjct: 696 QAKIVTAINKLGADVVGLEEVENSTKFGKDRDFALAHLVTELNKANNGAIKWAYVQSPAN 755 Query: 106 ---SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN---RRAVELLVEINGKKIWV 159 + + I TA V+ + S L A + + + + G V Sbjct: 756 VPNNGDFIRTAFIYNADKVKPVGDSQILGDASFNSIARSPLAQKFTPVVTADQTGTDFVV 815 Query: 160 LDIHLKSFCFLDSLENTYSPS--------CSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211 + H KS + N +QA + +W +P + GDF Sbjct: 816 IVNHFKSKRPPEGDSNADQADKGDGQGGWSPKRVEQAAAVANWANTTFA-GIPVFMVGDF 874 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY---------FVM 262 N + + ++ +D+ V Sbjct: 875 NSYSKEDAIIKL----------AELGFNKIPTVGHSYLFQSRVGSLDHAITNAVGMAIVA 924 Query: 263 DQNAYKFLIQESFSE-------ILYNEDDIKSRGKRLSDHCP 297 DQ A + I D + R SDH P Sbjct: 925 DQTAKVWEINAHEPVALEYSRKNYTASDLYTTDEFRSSDHNP 966 >gi|85859313|ref|YP_461515.1| hypothetical protein SYN_02542 [Syntrophus aciditrophicus SB] gi|85722404|gb|ABC77347.1| hypothetical membrane protein [Syntrophus aciditrophicus SB] Length = 346 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 33/299 (11%), Positives = 68/299 (22%), Gaps = 59/299 (19%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P A + +R+++WNI + D++ Q Sbjct: 89 PEPAPGSLNIRVMTWNIKY----------------DRRKAARFIREIDRCKPDVLLFQ-- 130 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + W IA R P G + Sbjct: 131 ------------DAWNSMRGPLGKHMPPDWHVLTRGQYVIASRYPLSEAEVHELPFSGKR 178 Query: 135 DSFSRAGNRRA-------VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 + + + L L ++ + + Q Sbjct: 179 KESFLRCRMTVGSTAISLYNVHFKTPRNSFYTLSKAKSRPWDLPEFIRSFDNNMKIRIAQ 238 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP----NDSLIRFPKEKDS 243 A +++++ P +++GD N L + + Sbjct: 239 AATIREYL---IAERGPVILSGDLNAPDASLVCSTLRGAGLRDAFAEGGRGYGHTYGHFL 295 Query: 244 RCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 N LR + ID+ + + + + + SDH P+ D Sbjct: 296 LKNRLPWLRFSWMRIDHIMSNAQL--------------KTRNCRVGTGKASDHRPVIAD 340 >gi|315304059|ref|ZP_07874477.1| sphingomyelin phosphodiesterase [Listeria ivanovii FSL F6-596] gi|313627571|gb|EFR96286.1| sphingomyelin phosphodiesterase [Listeria ivanovii FSL F6-596] Length = 248 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 67/213 (31%), Gaps = 20/213 (9%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++ S N+ S ++ N + +D Y K D+V L E +A Sbjct: 42 PGNFKITSHNVYLFSRN----IYPNWGQMHRADLIAQADYMKGN--DVVILNEAFDTSAS 95 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLG 132 ++ + T + + + +AV K V + + Sbjct: 96 HRLLNNLREMYPHQTPVIGRSKHGWDKTEGNYSNFALEDGGVAVVSKWPIVEKSQHIFQR 155 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + R N+ + + NGK ++ H ++ D + S + ++Q Q ++ Sbjct: 156 GGGA-DRLSNKGFAYVKIMKNGKPYHIIGTHTQA----DDSSISKDTSREIRAEQMQEIQ 210 Query: 193 DWITQ-KKESLVPFVIAGDFNRKINYLGNNDDF 224 +I I GD N +D Sbjct: 211 TFIAHKNISKEEVIFIGGDLNVNYGTDEYHDML 243 >gi|183233999|ref|XP_650532.2| exodeoxyribonuclease III [Entamoeba histolytica HM-1:IMSS] gi|169801308|gb|EAL45146.2| exodeoxyribonuclease III, putative [Entamoeba histolytica HM-1:IMSS] Length = 319 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 31/307 (10%), Positives = 90/307 (29%), Gaps = 79/307 (25%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 ++++ ++N+ + L ++ K + DI+ +QE + Sbjct: 66 ANDEIKIATYNV---------------ASWNAAMKKGLNEFIKEENPDILCVQETKLQDG 110 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 V + + ++S + + A+ K ++ + + Sbjct: 111 VNPMIDG--YHCYFSA---------STAKKGYAGTAILSK-----EEPLSITKKINGKEN 154 Query: 140 AGNRRAVELLVEINGKKIWVLDIH-LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R + + +K ++++ + + S L++L + + + + L+ Sbjct: 155 EHGRI-----ITVEYEKFYLVNSYVMNSGQRLENLVKRTTEWDKDMREHLKALQK----- 204 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKT----------------IDPNDSLIRFPKEKD 242 + GD N + ++ + I + + F + Sbjct: 205 ---KKNVIWCGDLNVALRWIDVAKPMTRLRCAGFTKEERASTNETIKELNLVDTFQVKYP 261 Query: 243 SRCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + K +DYF + ++ + + + SDH Sbjct: 262 KKRDFYTFFSFKDKSKTAGWRLDYFFVSKDLVDSV-----------TQIYRRKEISASDH 310 Query: 296 CPISIDY 302 P+ I Sbjct: 311 VPLIIHI 317 >gi|332260540|ref|XP_003279344.1| PREDICTED: deoxyribonuclease-1-like 1-like isoform 1 [Nomascus leucogenys] gi|332260542|ref|XP_003279345.1| PREDICTED: deoxyribonuclease-1-like 1-like isoform 2 [Nomascus leucogenys] gi|332260544|ref|XP_003279346.1| PREDICTED: deoxyribonuclease-1-like 1-like isoform 3 [Nomascus leucogenys] Length = 302 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 38/300 (12%), Positives = 76/300 (25%), Gaps = 38/300 (12%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 AL+F ++ AS AQ R+ ++N L+ + L + D Sbjct: 6 ALLFLIL---ASGAQAFRICAFNAQRLTL---------AKVAREQVMDTLVRILARC--D 51 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVL 124 I+ LQE+ + A F + S + R +VL Sbjct: 52 IMVLQEVVDSSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVL 111 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + R + + L + D+ Sbjct: 112 SSYVY-----NDEDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKDAEN---------- 156 Query: 185 SQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 + L D + + ++ GDFN L + + + Sbjct: 157 --ELNALHDVFLEVSQHWQSKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADGE 214 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 I + + L + + + + +SDH P+ ++ Sbjct: 215 DTTVRASTHCTYDRI--VLHGERCRSLLHTAAAFDFPTSFQLTEEEALNISDHYPVEVEL 272 >gi|325916353|ref|ZP_08178628.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937] gi|325537401|gb|EGD09122.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937] Length = 255 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 40/291 (13%), Positives = 85/291 (29%), Gaps = 52/291 (17%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-----DADIVFLQ 72 AS ++ +R+++ NI S S + R ++ D DIV LQ Sbjct: 3 ASDSRTLRVLTANIQAGSSTRRYSDYVTRSWSHALPLGAKRTSLDSIAKLAGDRDIVGLQ 62 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 E + + + + + +H R +A + K + Q + L Sbjct: 63 EADPGSLRSGFTNQTHYLAERAGFHYWSHQPNRRMGGVASSANGLLSKLEPLEVQDHALP 122 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 G R G R + + V HL + Q ++ Sbjct: 123 G------RIGGRGILLAKFGQGRDGLAVAVAHLSLG-------------ANSRMAQLAFI 163 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 + +++ + ++ GDFN + + + + + Sbjct: 164 AELLSEHPNA----MLMGDFNCVADRPEMQALYR---------HTRLQPPSGVVHTFPSW 210 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R ID+ ++ + + ++ SDH + +D Sbjct: 211 RPDRAIDHILVSDSL--------------VIEHTEAIPAAFSDHLAVGMDI 247 >gi|110677459|ref|YP_680466.1| exodeoxyribonuclease III, putative [Roseobacter denitrificans OCh 114] gi|109453575|gb|ABG29780.1| exodeoxyribonuclease III, putative [Roseobacter denitrificans OCh 114] Length = 262 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 32/305 (10%), Positives = 69/305 (22%), Gaps = 71/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 L +WNIN L+ + D++ LQE S Sbjct: 3 FSLATWNIN----------------SVRLREALVLKLMTEELPDVLCLQECKS------- 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P + + H + +A+ K + G + Sbjct: 40 -PVDKMPLEAFAAAGYGHV-VARGQKGYNGVAILSKIPMQEAAAEDFAGLGHARH----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E + V + ++ + D + + ++DW +K Sbjct: 93 --IAGRLENG---VTVHNFYVPAG--GDVADREVNEKFGQKLDYLTEMRDWFHAQKPEKS 145 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N D + ++ Sbjct: 146 --ILVGDLNIAPREDDVWDHKKLLKVVSHTPIEVEHLAQTQDAGGWVDITRQDIPEGRLY 203 Query: 249 KNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +D+ + ++ SDH P+ Sbjct: 204 SWWSYRAADWDAADKGRRLDHVWATSDIAAAGHDS-------RILRGARGWEKPSDHAPV 256 Query: 299 SIDYD 303 +D Sbjct: 257 FAQFD 261 >gi|56342181|dbj|BAD73858.1| deoxyribonuclease I [Triakis scyllium] Length = 281 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 80/301 (26%), Gaps = 32/301 (10%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 + + C A + + ++NI +S + ++ + D Sbjct: 4 LITALTLTCLMGAASSIHISAFNIRAFG---------DSKMSHPTITNIIVNLIQRY--D 52 Query: 68 IVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 I+ +QE+ + AV + K + + + S+ R V V+ Sbjct: 53 IILIQEVRDADLSAVKILMNKLNSASAQAFSYITSVPLGHSSYKERYLFVYRNSVVSVVD 112 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 Y A ++ NR + I I + Sbjct: 113 N-YLYSDASNTGQDTFNREPFLVKFSSPYSVIRDFVIMPMHTSPSVA------------V 159 Query: 186 QQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 ++ L D K+ +I GD N +Y+ D + + + Sbjct: 160 REIDALYDVFLDAKKKLGTDNMLIMGDLNADCSYVKPTDWAHIRLRKDRQFQWLIPDSAD 219 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISID 301 I + +I S + + + +SDH P+ + Sbjct: 220 TSTTITTKCAYDRI--IAVGSEMKNAIIDGSAAIYNFTSVLNLNNKMTAAVSDHYPVEVR 277 Query: 302 Y 302 Sbjct: 278 L 278 >gi|242006795|ref|XP_002424230.1| sphingomyelin phosphodiesterase, putative [Pediculus humanus corporis] gi|212507599|gb|EEB11492.1| sphingomyelin phosphodiesterase, putative [Pediculus humanus corporis] Length = 439 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 40/300 (13%), Positives = 84/300 (28%), Gaps = 41/300 (13%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 Q++R+ + N L T + +Y + D DIV LQE+ S Sbjct: 13 QQIRVFTLNCWGLPCFSKNKKC---------RITAIAEYLSSSDLDIVCLQEIWSKK--- 60 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK-----DS 136 + I + +S ++ I + + + K+ + Sbjct: 61 -----DYLYISKKCFLQLPYSHYFNSFIIGSGLCIFSKHPISDVYFHQWPINGYAHKIHQ 115 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + ++I + V + HL + + S QA +I Sbjct: 116 GDWLAGKGVAFARIKIKDLVVNVYNAHLHAEYNIHGT-----EYLSHRVLQAFDTSQFIR 170 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDD-FWKTIDPNDSLIRFPKEKDSRCNANKNLRN-- 253 E V+AGD N + + L + + + N + Sbjct: 171 LTIEDCDLAVLAGDLNTEPDDLAIKILNQNAQLTDCYFVAQKKTLTFFGTNESTRNSYAP 230 Query: 254 ---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY + + + +++ + + SDH + + + Sbjct: 231 KSEVKRLPQGKRIDYILYRNSRKINVEVQNYQ--FPLPEKVPGCTHSYSDHEGVEVLLQY 288 >gi|149376400|ref|ZP_01894162.1| Metal-dependent hydrolase [Marinobacter algicola DG893] gi|149359241|gb|EDM47703.1| Metal-dependent hydrolase [Marinobacter algicola DG893] Length = 286 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 35/287 (12%), Positives = 82/287 (28%), Gaps = 56/287 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFLQEMGS 76 +RL+++NI + + + + N D+V LQE Sbjct: 38 IRLLTFNIQVGINTSSYRHYFTRSWQHFLPHRNRIQNLDRIATLLSNY--DVVALQECDG 95 Query: 77 YNAVAKVFPKNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + + S R+ + + + + + + L G Sbjct: 96 GSLRSGYINQVQYLAEASGIPYWYQQLNRNLGQLAQHSNGLLSRYRPLDVKEHRLPGL-- 153 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R A+ + ++ +HL + Q + L +I Sbjct: 154 ----IPGRGAIIARYGAEEDPLVLVMMHLSL----------------SKAAQQRQLA-YI 192 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 V+ GD N L +N + ++ + ++ + R + Sbjct: 193 QALISEYQHVVLMGDLNNHAEELLSNTP----LKHSNLVPLPE-----TAHSFPSWRPER 243 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D+ ++ + + +SDH PI++D Sbjct: 244 ALDHILVSPSLEIRRSEVV--------------SYPVSDHLPIAMDI 276 >gi|229028217|ref|ZP_04184357.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271] gi|228733091|gb|EEL83933.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271] Length = 263 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 79/269 (29%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + D D++ LQE+ V F + Sbjct: 18 EKIKYLAKVIQEEDYDVIALQEVSQSIQAENVCGHKKKDNFGLLLLEELKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ + + ++ + KD+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAILTKHNVIKEDTFFVSENKDTTYWK-TRKIVSATIAYNGKNITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + + + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKGQVDRLMERVNR----DELSFLMGDFNNNARLQG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCN-----ANKNLRNKIPIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + ++ + ID + +Q+ + Sbjct: 183 EGYEYMMQKGLYDTYELAAEKDEGTTVQGEIAGWDKNKHNLRIDLILCNQSEKVRSSKVI 242 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F++ N +SDH + + D Sbjct: 243 FNDTNRNV---------ISDHFGVEVQVD 262 >gi|167004926|ref|ZP_02270684.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 81-176] Length = 252 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 78/304 (25%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + D + QE+ A Sbjct: 1 MKLLSWNVNGLRAICDKNA---------------LDWIAQEKIDFIGFQEI---KAHEDK 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FPK + + + + ++ + +++ + F R Sbjct: 43 FPKKIYEYPFKHMYFNSAKRA-----GYSGVMSLCNFDSEVKK-------CEFFDDEEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++E K I + +I+ + + N + L Sbjct: 91 -----VLEHRFKNIALFNIYFPNGQKDEERLNFKMKFYADFLVYLDKLLK-------DGF 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GD N L + + + F + Sbjct: 139 EIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + L + ++ SDH P+ Sbjct: 199 SWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFIRDDIF-----------GSDHAPVG 247 Query: 300 IDYD 303 I+ D Sbjct: 248 IEID 251 >gi|332703367|ref|ZP_08423455.1| Endonuclease/exonuclease/phosphatase [Desulfovibrio africanus str. Walvis Bay] gi|332553516|gb|EGJ50560.1| Endonuclease/exonuclease/phosphatase [Desulfovibrio africanus str. Walvis Bay] Length = 236 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 34/285 (11%), Positives = 79/285 (27%), Gaps = 55/285 (19%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 +++ ++NI+ +G + + + + LD DI+ LQE+ Sbjct: 4 TGAQRRLTAATYNIHAWVGTDG-----------QWNPSRVLEIMHALDVDILALQEVDFL 52 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + R ++ + + + L + Sbjct: 53 WSEGATAEEVLCREMGCQVLPGPTMVRGTS---RYGNMLLTRLPVLSYDQRDL-----AV 104 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R ++ L++ +G + VL HL + Q + L + Sbjct: 105 DGREPRCCIDALLDADGTSVRVLATHLGLK-------------RNERICQVRSLLAALD- 150 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 ++ P ++ GDFN FW + + + + R + + Sbjct: 151 -EDGEYPTILLGDFN-----------FWMPLFGASARLTHRVKASPLTRTFPANRPLLAL 198 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D + + + SDH P+ + Sbjct: 199 DRIYLSDGMRFGRVGS----------LDTPATRLASDHLPLRAEI 233 >gi|307707550|ref|ZP_07644032.1| exodeoxyribonuclease III [Streptococcus mitis NCTC 12261] gi|307616502|gb|EFN95693.1| exodeoxyribonuclease III [Streptococcus mitis NCTC 12261] Length = 275 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 79/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSTRAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K ++P +GA S R Sbjct: 55 KHLEILEELFPDYENKWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAP-STMDLEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + K +V ++ + ++ L + Sbjct: 114 I-----ITLEFDKFFVTQVYTPNTGDGLKRLEERQIWDVKYAEYLAEL--------DKEK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + +GD+N R + + + F Sbjct: 161 PVLASGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 VLEIE 274 >gi|302823174|ref|XP_002993241.1| hypothetical protein SELMODRAFT_187330 [Selaginella moellendorffii] gi|300138911|gb|EFJ05662.1| hypothetical protein SELMODRAFT_187330 [Selaginella moellendorffii] Length = 351 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 37/343 (10%), Positives = 89/343 (25%), Gaps = 91/343 (26%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM------ 74 A R +SWN N+L + R ++ + + + D D++ +QE+ Sbjct: 30 ADPSRFMSWNANSL------------LLRFKNNREEVMSFIRGFDPDVICIQEVRLPAAG 77 Query: 75 -----------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK---N 120 +A A+ + + + + + A+ K Sbjct: 78 FKGEKKNPGEIKDDSAAARNDKQAVMRVLSVSPMADYSVWWSLGENKYAGTALFVKNCFK 137 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + + G R + +L+ + + + Sbjct: 138 PVSVAFNIDNKGKDAQRHEIDGRIILA-----EFGSFTLLNTYAPN-----NGWKEEENG 187 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG--------------------- 219 + + ++++ + P + GD N + Sbjct: 188 FVRRRAWDKKVLEFVSSCSK---PLIWCGDLNVSHQEIDVTHPEFFANATQPGYTPPNKE 244 Query: 220 ----------NNDDFWKTIDPNDSLIRFPK----------EKDSRCNANKNLRNKIPIDY 259 F ++ + + + S K ++ IDY Sbjct: 245 DAGQPGFTLNERARFSAILNRGNLVDTYRHLHEKQDLEAGFTWSGNPVGKYRGKRMRIDY 304 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 F++ + L + G SDHCP++++ Sbjct: 305 FLISKALLPRLASSKIHGRGIELE-----GFLGSDHCPLTMEL 342 >gi|294658205|ref|XP_460546.2| DEHA2F04136p [Debaryomyces hansenii CBS767] gi|218511980|sp|Q6BMM5|CCR4_DEBHA RecName: Full=Glucose-repressible alcohol dehydrogenase transcriptional effector; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase gi|202952956|emb|CAG88862.2| DEHA2F04136p [Debaryomyces hansenii] Length = 831 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 81/321 (25%), Gaps = 42/321 (13%) Query: 24 VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++S+N + + + L++ + +D+V +QE+ + Sbjct: 482 FTMMSYNTLCQHYATTKMYKYTPSWALEWGFRRAALQEEVLHFKSDLVCMQEVETRTFHE 541 Query: 82 KVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY--------- 128 P + ++ R S+ DS A + +L + Sbjct: 542 FWVPVMQGFGYKGVFFNKTRSKTMSESDSKKVDGCATFYKTDKFELLHKQNFEYNSVCMG 601 Query: 129 --PLLGAKDSFSRAGNR----RAVELLVEINGKKIWVLDIHLKSFC-FLDSLENTYSPSC 181 KD F+R N+ G+KI ++ HL F D Sbjct: 602 SDKYKKTKDLFNRFMNKDNIALITYFNHIQTGEKILFVNTHLHWDPAFNDVKTLQVGILL 661 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI---------------NYLGNNDDFWK 226 L + + + VI GDFN + D+ K Sbjct: 662 EELRTIMKKYHHTNSIDEIKNASMVICGDFNSTKENAVYQLFSTGAVSNHEDLEGRDYGK 721 Query: 227 TIDPNDSLIRFPKEKDSRC----NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYN 281 D K + IDY + E + Sbjct: 722 FTDEGFRHSFKLKSAYDHVGELPFTTISPAFTDAIDYIWYSTPTLQVKGLLGKIDEEYSS 781 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 SDH P+ + Sbjct: 782 HCIGFPNAHFPSDHIPLVTKF 802 >gi|322821240|gb|EFZ27618.1| MP99, putative [Trypanosoma cruzi] Length = 915 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 95/314 (30%), Gaps = 41/314 (13%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLW---KNSVKRTTSDYTLLRQYAKNLDADIV 69 ++P +R+++WN+ + G T + Y L + + LDAD++ Sbjct: 616 VLPTPTEELSTLRVLTWNVQ-FNRHSGERTPLGRDGIDWCTPTRYIALAKTMETLDADVI 674 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 +QE+ WC + ++ + S N+ A+R V +L + + Sbjct: 675 SMQEVE-----------PAWCKYLCEQQWVRERYALSCNEDSH--AIRPWGVMLLVKRHL 721 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + + A + + I V + L L + S + Q + Sbjct: 722 RVEGMHHANVAAFAGHTSV---MPEVTITVSKNVPVTIGSLHLLAPYNKNNVSNRTTQLE 778 Query: 190 WLKDWITQKKESLVP---FVIAGDFNRKINYLGN------NDDFWKTIDPNDSL---IRF 237 L + + + ++ GDFN N D W ++P ++ Sbjct: 779 NLTKRMRARPSAGGVPTGAIVMGDFNDYANNYFTFPPELGFKDAWSLLNPENNKNEGYTI 838 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE---------DDIKSR 288 +++ D + + + E D Sbjct: 839 DGDRNPYAGQIIEREFFGRADRVLFASRHLQPIHAEIVGTTSVRALGITKQVNCDKAVPE 898 Query: 289 GKRLSDHCPISIDY 302 SDH + +++ Sbjct: 899 YLYPSDHFGLLVEF 912 >gi|229824704|ref|ZP_04450773.1| hypothetical protein GCWU000182_00052 [Abiotrophia defectiva ATCC 49176] gi|229791033|gb|EEP27147.1| hypothetical protein GCWU000182_00052 [Abiotrophia defectiva ATCC 49176] Length = 250 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 68/304 (22%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + +DAD LQE+ Sbjct: 1 MKYISWNVNGLRACLTKGFM---------------DFFNKVDADAFGLQEIKLSEG-QLE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ + + A+ K + + D R Sbjct: 45 LDLPGYHKYWNYAEKKGY----------SGTALFTKKEPINVTYDMGIDEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + E V + ++ + + Sbjct: 91 ---VITAEYEDHFFVVCYTPNA---------KQELERLDYRMVWEDDFRAYLNK-LKESK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + F N Sbjct: 138 PVILCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKMTELLDAGYIDTFRFFYPELENVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ + L + SDHCP+ Sbjct: 198 SWWSYRFKAREKNTGWRIDYFITSDDFKDRLKDAKIHSEIL-----------GSDHCPVE 246 Query: 300 IDYD 303 +D+D Sbjct: 247 LDFD 250 >gi|171742567|ref|ZP_02918374.1| hypothetical protein BIFDEN_01680 [Bifidobacterium dentium ATCC 27678] gi|306822478|ref|ZP_07455856.1| exodeoxyribonuclease III [Bifidobacterium dentium ATCC 27679] gi|309801420|ref|ZP_07695547.1| putative exodeoxyribonuclease III [Bifidobacterium dentium JCVIHMP022] gi|171278181|gb|EDT45842.1| hypothetical protein BIFDEN_01680 [Bifidobacterium dentium ATCC 27678] gi|304554023|gb|EFM41932.1| exodeoxyribonuclease III [Bifidobacterium dentium ATCC 27679] gi|308221935|gb|EFO78220.1| putative exodeoxyribonuclease III [Bifidobacterium dentium JCVIHMP022] Length = 286 Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 34/311 (10%), Positives = 78/311 (25%), Gaps = 57/311 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VA 81 + + + N+N + + + +A DI +QE+ + + Sbjct: 2 TISITTSNVNGIRA---------------AKRKGIEIWAGRNTPDIWCMQEVRAPQHEID 46 Query: 82 KVFPKNTWCI----FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +F + + + + ++ + + + ++ D Sbjct: 47 PIFDEFGFEYSTAGKIADQSELDRLNEVCRIKGRAGVGLLSALPVIDKRYGLPGLDDDVD 106 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 S R + G + V+ +++ + D L + + + Sbjct: 107 S---GRWIEADVKTPQGYIVTVVCVYVHAGNTDD--PAKMEQKYRFLDTMLERMGQLRDE 161 Query: 198 KKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEK 241 V+ GDFN K + + + Sbjct: 162 AAHGGRQSVLCGDFNIAHTPLDIKNAKANETHAGFLPEERAYVDKWLGELEFVDVMRNLA 221 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + IDY + + D + KR Sbjct: 222 GDIQGPYTWWSQRGRAFDNNVGWRIDYQFATPELAESACG-------FVIDKAPTYDKRW 274 Query: 293 SDHCPISIDYD 303 SDH P++I YD Sbjct: 275 SDHAPLTITYD 285 >gi|312371109|gb|EFR19370.1| hypothetical protein AND_22625 [Anopheles darlingi] Length = 533 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 38/318 (11%), Positives = 89/318 (27%), Gaps = 47/318 (14%) Query: 24 VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++ +N+ + + ++ + + ++ ADI+ LQE+ + Sbjct: 163 FTVMCYNVLCDKYATRQMYGYCPSWALSWEYRKKAILDEIRHYSADIISLQEVETDQFFN 222 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLL------ 131 P+ + + +K S D AI R ++++ Sbjct: 223 FFKPELKNDGYEGIFSPKSRAKTMSEADRKYVDGCAIFFRSSKFSLIKEHLVEFNQLAMA 282 Query: 132 ---GAKDSFSRAGNR--RAVELLVEINGKKIWVLDIHL----KSFCFLDSLENTYSPSCS 182 G+ + +R + + L+++ + + + + C Sbjct: 283 NAEGSDNMLNRVMPKDNIGLAALLKVKEGAWESVSPEAAQISQPLLVCTAHIHWDPEFCD 342 Query: 183 LLSQQAQWLKDWITQKKES--------------LVPFVIAGDFNRKINYLGNNDDFWKTI 228 + Q L + I + V V+ GDFN + Sbjct: 343 VKLIQTMMLSNEIKTILDEAGLSFRPGHKFDVNNVQLVLCGDFNSLPDSGVIE------F 396 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK---FLIQESFSEILYNEDDI 285 + ++ + R IDY + L S + N+ Sbjct: 397 LSAGRVSMDHQDFKELGYKSCLQR---IIDYIFYSKQGMVPLGLLGPISSDWLRENKVVG 453 Query: 286 KSRGKRLSDHCPISIDYD 303 SDH P+ ++ + Sbjct: 454 CPHPHIPSDHFPLLVELE 471 >gi|291303122|ref|YP_003514400.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] gi|290572342|gb|ADD45307.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] Length = 310 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 36/299 (12%), Positives = 82/299 (27%), Gaps = 34/299 (11%) Query: 17 TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 A A ++ ++SWN ++ + ++ D D++ LQE+ Sbjct: 25 VADEATELNVLSWNTCGEAGGKRGDAGFCPYRDD-PQAKVDVIADLVAERDLDVILLQEV 83 Query: 75 GSYNA------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + A + + R + + + +A+ K S Sbjct: 84 CAETADSHLGRLKTALGDDWQIGNARGARPDGRTDCRGDLNGELGVAIAIKASNAEFTSK 143 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 L + + V H+ + QQ Sbjct: 144 QTLPPDPTGQSKQTLPTLCAT--TTDWPTTVCTTHILADPEDP-----------RRPQQV 190 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + ++D++ S V+ GDFN + + + D + Sbjct: 191 KNVRDYV---WPSRANLVLGGDFNLFPGSSTLKPISDNFHECDGRSYGSGDKVDETTHHA 247 Query: 249 KNLR----NKIPIDYFVMDQ--NAYKFLIQESFSEILYNEDDIKSRG--KRLSDHCPIS 299 + D+ + + F +S ++++ ++ G SDH P+ Sbjct: 248 WTGDDTHVYRKR-DHIFASKPDSGTNFGSCDSRTDLMDTTENEPDSGPPSGYSDHAPLL 305 >gi|89889637|ref|ZP_01201148.1| exodeoxyribonuclease III [Flavobacteria bacterium BBFL7] gi|89517910|gb|EAS20566.1| exodeoxyribonuclease III [Flavobacteria bacterium BBFL7] Length = 253 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 29/303 (9%), Positives = 85/303 (28%), Gaps = 73/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+N+N + + K + D++ LQE+ + Sbjct: 1 MKIISYNVNGIRAAMKKDFIT---------------WLKAANPDVLCLQEIKATEDQVD- 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ +A+ K + G R Sbjct: 45 ------TEAFKEAGYAYQYYYSAQKKGYSGVAIISKTKP----DHVEYGTGIESMDFEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ + ++ ++L S D S + + ++ + ++ Sbjct: 95 N-----LRVDFGDVSIMSMYLPSGTNDD--------RLSFKFKYMEEFLEYSKELRKERP 141 Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GD+N + ++ W I + + + + Sbjct: 142 NLIVCGDYNICHKAIDIHNPKGLKSTSGFLPEEREWMDRFVASGFIDTFRMFNDQPDQYS 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +DY + + + + + + SDHCP+ + Sbjct: 202 WWSYRGGSRARNKGWRLDYHMATEQMTDRIKRAVILQSAVH-----------SDHCPVVV 250 Query: 301 DYD 303 + D Sbjct: 251 EID 253 >gi|21242774|ref|NP_642356.1| exodeoxyribonuclease III [Xanthomonas axonopodis pv. citri str. 306] gi|21108255|gb|AAM36892.1| exodeoxyribonuclease III [Xanthomonas axonopodis pv. citri str. 306] Length = 330 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 36/297 (12%), Positives = 75/297 (25%), Gaps = 72/297 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 ++ ++N+N ++ L ++ + DIV LQE+ S Sbjct: 7 KIATFNVNGIAS----------------RLPHLLEWLQRDQPDIVGLQELKSTQVA---- 46 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-NVRVLQQSYPLLGAKDSFSRAGNR 143 R + +A+ + V + +D+ SR Sbjct: 47 ------FPEQAIRDAGYGVIWQGEKSWNGVALLARGIEPVEIRRGLPWDPRDTQSRY--- 97 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + V ++L + + Y + + L + Sbjct: 98 ------LEAAIHGVVVACLYLPNGNPQPGPKFDYKLA------WFERLIRHAKTLVDLPH 145 Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GDFN D ++T+ Sbjct: 146 PVALIGDFNVVPTDADIYDPKGWRKDALLQPESRAAYQTLLAQGWTDSLLAIHGQTPIYT 205 Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ ++++ L D ++ SDH P Sbjct: 206 FWDYFRQHFARDRGLRIDHLLLNRTLAPGLQDAGV-------DKWVRALEKASDHAP 255 >gi|330828556|ref|YP_004391508.1| putative extracellular nuclease [Aeromonas veronii B565] gi|328803692|gb|AEB48891.1| Predicted extracellular nuclease [Aeromonas veronii B565] Length = 729 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 42/372 (11%), Positives = 90/372 (24%), Gaps = 89/372 (23%) Query: 20 VAQKVRLVSWNINTLSEQEGV---------------------SLWKNSVKRTTSDYTLLR 58 +R+ S+N+ + S T + Sbjct: 324 AGSDLRIGSFNVLNYFTSHSSIGGALNILCKDQADADNAKGCNRGAKSQPEFEKQRTKII 383 Query: 59 QYAKNLDADIVFLQEMGSY-----NAVAKVF---------PKNTWCIFYSTERLINHSKR 104 +DAD++ L EM + +A+ + + + K Sbjct: 384 NAITAMDADLLGLMEMENNGFEDNSALHNLVTRLNEQQKDASKHYAYVRLPVTALTDGKF 443 Query: 105 DSNNDIHTAIAVR------KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKK 156 + I A+ R + V++ AG R ++ + + + Sbjct: 444 FGGDAIMVAMLYRPALLTPSGDASVIKLPEQRYTTGGVAKTAGQRDSLVQTFTLAKSKEP 503 Query: 157 IWVLDIHLKSFCFLDSLENTYS--------PSCSLLSQQAQWLKDWITQ----------- 197 + ++ HLKS A+ L + +++ Sbjct: 504 LTLVVNHLKSKGSGCYENGDGKTEPADLQGKCTEFRVSAAKVLGEAVSKLPGQVLLVGDF 563 Query: 198 -KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPKEKDS 243 P + D+N + I + + K Sbjct: 564 NSYAKEDPIRVLTDYNPATSERKIVSASHTFIGDHSYEQLGREVTRSYGLIDLNVKFNKE 623 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------------ 291 + + +DY + + + + I E + G + Sbjct: 624 KAISYSYDGELGTLDYALANPALASKVAGVADWHINSFESSLFEYGSQYTGSLLKSDNPF 683 Query: 292 -LSDHCPISIDY 302 SDH PI +D Sbjct: 684 SASDHDPIIVDL 695 >gi|299141550|ref|ZP_07034686.1| endonuclease/Exonuclease/phosphatase [Prevotella oris C735] gi|298576886|gb|EFI48756.1| endonuclease/Exonuclease/phosphatase [Prevotella oris C735] Length = 340 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 36/344 (10%), Positives = 92/344 (26%), Gaps = 63/344 (18%) Query: 9 LVFFLVPCTASVAQKVRL---VSWNINTLSEQEGVSLWKN-----------SVKRTTSDY 54 +V V S +K + +N L + + ++ + + Sbjct: 1 MVALFVCLATSAQKKFSVYAVGFYNQENLFDTCHDAGKRDYDFLPTGSYRWDGLKYSHKL 60 Query: 55 TLLRQYAKNLDADI--------VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 + + ++ D+ + L E+ + + + + + H + Sbjct: 61 HNMARALADMGTDVLPNVGCAVIGLSEVENRKTLEDLTAQPELK---ARNYQFAHIEGPD 117 Query: 107 NNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 I A+ + ++ P + + + R + + ++ + + + HL Sbjct: 118 KRGIDCALIYNPSLFTMESETLVPYRNSTEQDTSFVTRGFLTVTGKLANEPVAFIVCHLP 177 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 S S + QA+ +KD + + + GD N + Sbjct: 178 SRFSGPSYREWGAL-------QAKAVKDSL-LVLNPQMKVFVMGDMNDDPTDKSMYEALS 229 Query: 226 KTID------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 + + K D VM N + +F+ + Sbjct: 230 AKESIEKVGPDDMYNPWYNILKKQGKGTLMYRGTWNLFDQIVMTPNLLNKKGENNFTTLK 289 Query: 280 YNEDDIKSRGK-----------------------RLSDHCPISI 300 + ++ I+ SDH P+ + Sbjct: 290 FWKNQIQRMPYLFQSEGQYKGSPKRTTAGGVWLDGFSDHLPVCV 333 >gi|227547870|ref|ZP_03977919.1| possible exodeoxyribonuclease III [Corynebacterium lipophiloflavum DSM 44291] gi|227080055|gb|EEI18018.1| possible exodeoxyribonuclease III [Corynebacterium lipophiloflavum DSM 44291] Length = 259 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 34/294 (11%), Positives = 78/294 (26%), Gaps = 59/294 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++N+N S + + + D D++ +QE + A Sbjct: 1 MRIATFNVN----------------SVRSRAERIVAFLERNDVDVLAMQETKTSEA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y+ + + +A+ + + + G+ Sbjct: 41 ------KFPYAVFEAAGYEVAHVGTNQWNGVALASRVGLEDVR----TQFDHQPAYEGSV 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC-----SLLSQQAQWLKDWITQK 198 A + G + V +++ + + Y ++ Q L Sbjct: 91 EARAVGATCGG--VEVWSLYVPNGREIGHPHYDYKLQFLYSLQHEVAAQTPQLFTGDFNI 148 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---- 254 F K + ++ + + + K Sbjct: 149 APRDSSVWDIAWFEGKTHVTEPERAAFEMLLEAGLVEIRHDDA------YSFWDYKAMRF 202 Query: 255 -----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ID+ + L++ D + RGK SDH P+ D+D Sbjct: 203 QKNQGMLIDFLLATPPLAGKLVKAWV-------DVDERRGKGASDHAPVIADFD 249 >gi|226508522|ref|NP_001147019.1| CCR4-NOT transcription complex subunit 6 [Zea mays] gi|195606510|gb|ACG25085.1| CCR4-NOT transcription complex subunit 6 [Zea mays] Length = 620 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 53/360 (14%), Positives = 98/360 (27%), Gaps = 65/360 (18%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 A+V F + S ++S+NI +T + + S L + Sbjct: 253 AMVHFDLDSRTSSFGTFTVLSYNILADTYATSDTYSYCPTWALTWAYRRQNLLREIIGYH 312 Query: 66 ADIVFLQEMGSY---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 ADI+ LQE+ S + + K+ + Y +S D R + Sbjct: 313 ADIICLQEVQSNHFEDFFSPELDKHGYQPLYKKRTTEVYSGSPQAIDGCATFFRRDRFSH 372 Query: 123 VLQQSYPLLGAKDSFSR-----AGNRRAVELLVEINGKKIWVLDIHLKS----------- 166 V + A S + A + A+ LV+ N I VL+ + Sbjct: 373 VKKYEVEFNKAAQSLTDAIIPAAQKKLALNRLVKDNIALIAVLEAKFSNHGTENPSKRQL 432 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK-ESLVPFVIAGDFNRKINYLGNN---- 221 C ++ N + + Q L + + + +P ++ GDFN + Sbjct: 433 LCVANTHINIHHDLKDVKLWQIHTLLKGLEKIAVSADIPMLVCGDFNSTPGSTSHGLLAR 492 Query: 222 --------------------------------------DDFWKTIDPNDSLIRFPKEKDS 243 D + R + Sbjct: 493 GKVDHLHPDLAIDPLGILRPLSKLTHQLPLVSAYSSFVSMAGVGYDLDHQRRRMDPGTNE 552 Query: 244 RCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +DY + + E E +D + SDH + ++ Sbjct: 553 PLFTNCTRDFTGTLDYIFYTADSLTVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEF 612 >gi|257076437|ref|ZP_05570798.1| exodeoxyribonuclease III [Ferroplasma acidarmanus fer1] Length = 252 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 82/304 (26%), Gaps = 79/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 ++++SWN+N + + + +N + DI+ LQE + + Sbjct: 1 MKILSWNVNGIRAAVKNG---------------IIKTLENENPDIILLQEAKADKMDIPE 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + I+ + +S + PL + + Sbjct: 46 ELHHTGYKIYVNPADKKGYSGTMAMAKQE-----------------PLSYTTGTGENNKD 88 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +E + ++++ + + + + + + L ++ Sbjct: 89 VEGRIQTLEYDN--FYLINSYFPNSQHGLTRLDYKIQFNREILEYMDKL--------KAK 138 Query: 203 VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P +I GDFN + D I + + + + Sbjct: 139 KPVIITGDFNVAHEEIDIARPKGNEKNAGFTIEERDSMTEILSHGYVDTYRYFHKEPGH- 197 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF++ N + ED + SDH P+ Sbjct: 198 YSWWSYRFNAREKNIGWRIDYFLVSDNFIGKV-----------EDSLILENVTGSDHAPL 246 Query: 299 SIDY 302 + Sbjct: 247 ELIL 250 >gi|319954545|ref|YP_004165812.1| exodeoxyribonuclease iii xth [Cellulophaga algicola DSM 14237] gi|319423205|gb|ADV50314.1| exodeoxyribonuclease III Xth [Cellulophaga algicola DSM 14237] Length = 254 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 34/302 (11%), Positives = 79/302 (26%), Gaps = 75/302 (24%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 +VSWN+N + + + K + DI+ LQE + ++ Sbjct: 3 IVSWNVNGIRAAVKKDFF---------------EAVKTMAPDILCLQETKAQDSEVAKAL 47 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 ++ ++ ++ ++ A+ K + + D+ R Sbjct: 48 ESLSNFSLNSN--------SADKKGYSGTAILSKQAPISATPNMGIEVHDTEGRI----- 94 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + +++++++ + + L+ P Sbjct: 95 ----LCTEYDSFYLVNVYVPNSGQKLDRLEYRQQWDKDFLAYLKNLEK--------KKPV 142 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPND---------------SLIRFPKEKDSRCNANKN 250 + GDFN + +D + + A Sbjct: 143 IACGDFNVAHQAIDLKNDKANYNKTAGYTQIEIDGMDNFIANDFVDSFRALHPDEVAYTF 202 Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + IDYF++ + + + + SDHCPI I Sbjct: 203 WSYRFKSRERNTGWRIDYFLVSKAIADKIKKVTI-----------YADIMGSDHCPIGIT 251 Query: 302 YD 303 Sbjct: 252 LS 253 >gi|310800439|gb|EFQ35332.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola M1.001] Length = 441 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 93/302 (30%), Gaps = 39/302 (12%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + + + ++S N+ L T++ + + DI+ +QE Sbjct: 19 ALAQATSGDLTILSMNVAGLP---QFLQNNEVPGDKTTNSKTIGTLFSAYNYDIINVQED 75 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 +Y+A + R + ++T V + + Sbjct: 76 FNYHA-------YIYQTDRHAYRTATSGGVPFGSGLNT--LSNYNWVDFERVKWNTCSDA 126 Query: 135 DSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 S + + V ++ G + V+++H + S + + D Sbjct: 127 SSNDCLTPKGFTFMRVRLDEGVYVDVINLHTDAGTEAGDSVARNSN--------LKQVAD 178 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNND-----------DFWKTIDPNDSLIRFPKEKD 242 +I + +I GD N + L +D D W + + + Sbjct: 179 YIDAN-SAGNAVLIFGDTNSRYTRLTPDDIGIFGTQNGMTDSWVQLVRDGVVPTAETL-- 235 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 C+ +D + L +++ +E ++ G LSDH PI++++ Sbjct: 236 --CDNPSTTSYCETVDKNFYRGSPVLNLEATAWN--YASEKFLQPDGNILSDHNPIAVNF 291 Query: 303 DF 304 + Sbjct: 292 TW 293 >gi|302679254|ref|XP_003029309.1| hypothetical protein SCHCODRAFT_58593 [Schizophyllum commune H4-8] gi|300102999|gb|EFI94406.1| hypothetical protein SCHCODRAFT_58593 [Schizophyllum commune H4-8] Length = 645 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 35/343 (10%), Positives = 80/343 (23%), Gaps = 61/343 (17%) Query: 21 AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 A+ ++ +NI + + ++ + L+ + A+ V LQE+ Sbjct: 296 AETFSVLCYNILCDKYATEKLYGYTPSWALAWDYRKELILKELVAHQAEFVCLQEIDVGQ 355 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAK 134 + + ++ + T A R +++++ L A Sbjct: 356 FEDYFLKHMMEHGYEAVFWPKPRARTMGEAERRTVDGCATFYRSDRFKLVEKHLVELSAV 415 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHL-----KSFCFLDSLENTYSPSCSLLSQQAQ 189 + + N + I V+ F ++ + C + Q Sbjct: 416 AMQRSDFIKTDIMFNRLFNKEYIAVVCCFEDRSTGTRFIVANAHMFWNADFCDVKLVQVG 475 Query: 190 WLKDWITQKK-----------------------ESLVPFVIAGDFNRKINYLGNNDDFWK 226 L D + + + +P ++ GD+N Sbjct: 476 MLMDELEKIAHAFARYPPPLKTESGQPPPSYSDGTKIPTIVCGDYNSVPRSGVYEYLSAG 535 Query: 227 TIDPNDSLIRFPKEKDSRCN--------------------------ANKNLRNKIPIDYF 260 ++ P+ N + IDY Sbjct: 536 SLPPDHPDFLGHSYGRYTEEGMRHRFGLRSAYALPGPGPGAELLPMTNYTPSFQGVIDYI 595 Query: 261 VMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + SDH I + Sbjct: 596 WYSAPTVAVQKVLGEVDRSYLEKVVGFPNAHFPSDHLAILAQF 638 >gi|328708594|ref|XP_001942566.2| PREDICTED: 2',5'-phosphodiesterase 12-like [Acyrthosiphon pisum] Length = 569 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 36/318 (11%), Positives = 80/318 (25%), Gaps = 37/318 (11%) Query: 22 QKVRLVSWNINTL-------SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 +R+V++N+ ++ + ++ + L+ + + + DI+ LQE+ Sbjct: 249 NSIRVVTYNLLAGEYTKTKEAKTVMYPYCPEKILASSYRHPLILRELQTYNGDIICLQEV 308 Query: 75 GSYNAVAKVFPKNTWC-----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 + ++ P +F+ N + + + + Sbjct: 309 DKHFFHRELCPILKKFKGMNGLFFKKNGRRNEGLSCFYSPEKFNLLEQFDISLNNPTTVE 368 Query: 130 LLGAK-------DSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYS 178 L D + G + V I+ KK L + D Sbjct: 369 LYCGPIVKDIMDDEIWKQGLEKKTVFQVLAFELISDKKQLFLVCNTHLISDPDGDFIRLF 428 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY-----------LGNNDD--FW 225 + L + ++ V + GDFN + Sbjct: 429 QALIELIIINKIKQNINKDYLGRNVSVIFCGDFNSTPESGVYDLATKLTLPEEHRTVKIL 488 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL-IQESFSEILYNEDD 284 + N +N +DY + + + S + Sbjct: 489 NDLKNNLEFKMESAYNTDVLYSNYTKTFSGLLDYIYFTNQHLELIQVLSMPSHDDVIQHG 548 Query: 285 IKSRGKRLSDHCPISIDY 302 SDH + D Sbjct: 549 GIPSLLFPSDHLALIADL 566 >gi|315925763|ref|ZP_07921970.1| exodeoxyribonuclease III [Pseudoramibacter alactolyticus ATCC 23263] gi|315620872|gb|EFV00846.1| exodeoxyribonuclease III [Pseudoramibacter alactolyticus ATCC 23263] Length = 254 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 70/305 (22%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 ++L SWN+N + E + + D++ +QE+ Sbjct: 1 MKLYSWNVNGIRAAEKKGF---------------VDWLQREQPDVLGIQELKAEPDQLSD 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +F++ +S L G D Sbjct: 46 ALKDVEGYHVFFNPAERKGYSGTAVYYKREPKRI--------------LTGLSDERFNHE 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + + +I+ + D + ++ Sbjct: 92 GR-----TIILEYPDFTLYNIYFPNGSQSDERLQFKMDFYDGFWH-------DVDERVAR 139 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKT-------IDPNDSLIRFPKEKDSRCN-------A 247 +I GD N + + I+ F Sbjct: 140 GEKVIICGDVNTAHREIDLKNPKSNAKRSGFLPIEREWMDHFFAGGYIDTYRYFYPEQVT 199 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF NA L + SDHCPI Sbjct: 200 YSWWSYRFNARKNNAGWRIDYFFASDNAKDLLADAAIHT-----------DVTGSDHCPI 248 Query: 299 SIDYD 303 S+ + Sbjct: 249 SLTLN 253 >gi|47213945|emb|CAF94476.1| unnamed protein product [Tetraodon nigroviridis] Length = 320 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 34/300 (11%), Positives = 77/300 (25%), Gaps = 73/300 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 ++ SWN++ L + + + D++ LQE Sbjct: 66 KITSWNVDGLRAWVKKKG---------------LDWVREENPDVLCLQETKCAE------ 104 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 I E + + + ++ +A+ K V G R Sbjct: 105 KSLPADITSMPEYPYKYWAGSDDKEGYSGVAMLCKTEPVKVT----YGIGKEEHDKEGR- 159 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ +++ ++ + + + L + P Sbjct: 160 ----VITAEFPGFFLVTAYVPNSGRGLVRLDYRKTWDADFRTYLSEL--------DVQKP 207 Query: 205 FVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 V+ GD N + + + + + F + + +A Sbjct: 208 VVLCGDLNVAHQEIDLKNPKGNKKNAGFTAEEREGFGQLLEAGFVDSFRELYPEQSHAYS 267 Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +DYFV+ + L + + SDHCPI++ Sbjct: 268 FWTYMMNARDKNVGWRLDYFVLSSSLLPGLCDSKIRNQV-----------KGSDHCPITL 316 >gi|291515610|emb|CBK64820.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301] Length = 380 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 35/294 (11%), Positives = 83/294 (28%), Gaps = 43/294 (14%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 TA V+++S+N+ + ++G S + + + + D++ LQE + Sbjct: 118 TAFDRAAVKVMSYNVRSFYGEDGRSSVDD-----------ILRLIEEQAPDLICLQEFNA 166 Query: 77 YNAVA----KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP-LL 131 A + + + + + + + +R V S + Sbjct: 167 RLAEQSEEFSLLGEKYEIAHFGRTQAPDSVYGSTLTILSKYRILRSDTVLTPSSSVWADV 226 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD---SLENTYSPSCSLLSQQA 188 + R N + + + L S+ + L + Q Sbjct: 227 IVGEDTVRVFNNHLRSTAINASDNQFITSHQFLSDTARETKIRSIVTRLRENSVLRAAQV 286 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + + + ++ GDFN + + F + + Sbjct: 287 DSIAQVVGATRTRR---IVCGDFNDTP-MSYVYRTMARGLRD-----AFRECGSGYSHTF 337 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + N + IDY + S+ + + SDH P+ + Sbjct: 338 RGFYNTLRIDYVLSGG-----FEPLSYEVLPVD----------YSDHHPVVVRL 376 >gi|194216325|ref|XP_001504052.2| PREDICTED: similar to sphingomyelin phosphodiesterase 2, neutral membrane [Equus caballus] Length = 560 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 77/306 (25%), Gaps = 38/306 (12%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 P + + ++R+ S N + L + D+ L Sbjct: 134 IAFPGCPNFSLRLRVFSLNCWGIPYLSKHRAD---------RVKRLGDFLNMESFDLALL 184 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 QE+ S + K S H R + + + Q Y L Sbjct: 185 QEVWSEQDFQYLRQK------LSPTYPAAHYFRSGIIGSGLCVFSKHSIQEITQHIYTLN 238 Query: 132 GAKD---SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 G + L++ ++G + HL + + QA Sbjct: 239 GYPYMIYHGDWFCGKAVGLLVLHLSGLVLNAYVTHLHA-----EYNRQKDIYLAHRVAQA 293 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNA 247 L +I + ++ GD N LG W + R K + C Sbjct: 294 WELAQFIHHTSKKADVVLLCGDLNLHPKDLGCRLLKEWTGLHDAYLETRDFKGSEEGCTM 353 Query: 248 NKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 IDY + + +F I + G LSDH Sbjct: 354 VPENCYVSRQELEPFPLGIRIDYVLY-KAVSRFYISC--KTLKTTIGRDPHSGTPLSDHE 410 Query: 297 PISIDY 302 + Sbjct: 411 ALMATL 416 >gi|327474597|gb|EGF20002.1| exodeoxyribonuclease [Streptococcus sanguinis SK408] gi|328946601|gb|EGG40739.1| exodeoxyribonuclease [Streptococcus sanguinis SK1087] Length = 275 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 80/305 (26%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q + +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLS------QAVLQTLQAENADIIAIQETKLSATGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K ++P +GA S R Sbjct: 55 KHLEILTNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAP-STMDVEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +V ++ + + ++ L + Sbjct: 114 I-----ITLEFDDFFVTQVYTPNAGDGLKRLEDRQVWDAKYAEYLATL--------DGQK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F + Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPDQY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 VMEIE 274 >gi|237750354|ref|ZP_04580834.1| exodeoxyribonuclease LexA [Helicobacter bilis ATCC 43879] gi|229373884|gb|EEO24275.1| exodeoxyribonuclease LexA [Helicobacter bilis ATCC 43879] Length = 255 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 76/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++SWN+N L + +DAD+ +QE + + + Sbjct: 1 MKMISWNVNGLRACMTKGFM---------------DFFNTIDADVFCIQESKMHRSQSDF 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + E ++ + K + + R Sbjct: 46 VFDGYYQFWNEAE-----------KKGYSGTIILSKTEPLSV----CNDMGIAHHDKEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V ++++++ + + L+ + Sbjct: 91 IIVA-----EYATFFLVNVYTPNSKRELERLTYRQEWEDDFRSFLKGLEQY--------K 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + + + +A Sbjct: 138 PVIVCGDLNVAHKEIDLKNPKTNRRNAGFTDEEREKMSVLLDSGFIDSYRYFYPDKEHAY 197 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 IDYF++ + K L + SDHCP+ Sbjct: 198 TWWSYMGKARQNNTGWRIDYFLLSRCLAKNLKEAHI-----------YPEIMGSDHCPVG 246 Query: 300 IDYD 303 I D Sbjct: 247 IVID 250 >gi|188997510|ref|YP_001931761.1| exodeoxyribonuclease III Xth [Sulfurihydrogenibium sp. YO3AOP1] gi|188932577|gb|ACD67207.1| exodeoxyribonuclease III Xth [Sulfurihydrogenibium sp. YO3AOP1] Length = 264 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 90/306 (29%), Gaps = 69/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ ++N+N + R L +N D D++ QE + N + Sbjct: 1 MKICTFNVN------------SIKARKDLVIEWLNH--RNNDIDVLCFQEIKVEDKNFPS 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F K + S + +A K S+ G + Sbjct: 47 EDFKKLGYVYQ-----------DISGQKGYNGVATLSKLEI----SHYQKGLNHEYFDVQ 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE- 200 R ++ ++E K+I+V++ + + Y + +++ + + Sbjct: 92 KRVLIDKIIE---KEIFVINTYAPHGDLRGGEKYYYKLD------WYKHFINFLKENFDF 142 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFW-------------------KTIDPNDSLIRFPKEK 241 ++ GD N + + D + +P ++ Sbjct: 143 ENQKIMLLGDLNIALEDIDVYDPVLLTDSIGTMPEERELLRQLLNLGLIDTFRYLYPNKQ 202 Query: 242 DSRCNANK----NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDY ++ + +++ R + SDH P Sbjct: 203 QFTWWDYIGGAIWRNEGMRIDYILVSKPFLQYVKNVEVDLWPRR-----RRSPKPSDHAP 257 Query: 298 ISIDYD 303 + +D + Sbjct: 258 VILDLE 263 >gi|262383334|ref|ZP_06076470.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 2_1_33B] gi|262294232|gb|EEY82164.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 2_1_33B] Length = 304 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 91/331 (27%), Gaps = 55/331 (16%) Query: 2 IRKYVLALVFFLVPCTASVA-----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 +RK L + C A A V++ S+NI L+ G + Sbjct: 1 MRKISEILCCVAILCCALSACSDKPATVKVSSFNI-WLNTLGGKLPP-----------SQ 48 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + + DIV +QE ++ ++ + E + N I Sbjct: 49 TAKVIEASQTDIVGIQE-------GHIYEEDGIKHDHVPEIAESLGFHLFNQGEGHYILS 101 Query: 117 RKKNVRVLQQSY--PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 R V Y + KD F N + + + I + F+D+ E Sbjct: 102 RYPVVDSTASRYGVKIQVGKDKFCWMFNCHLYYI----PYQPYQLNGIPYGDYPFIDTEE 157 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD----------- 223 + ++ + I Q + P + GDFN Sbjct: 158 EAVWFANEARREEVTRYQKDIQQVMKEGYPVFLTGDFNEPSFLDWTQRAADAGIHKIKVE 217 Query: 224 -----FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQE 273 + I NDS ++ S +D+ + + + Sbjct: 218 WPATKAFSEIGMNDSYRTIHPDEVSTPGYTWTPVPSEQEILDRLDFVLYSG----CKVTD 273 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 SF SDH ++ ++F Sbjct: 274 SFITGESEATSDVVVSPYPSDHRMVTSCFNF 304 >gi|229159517|ref|ZP_04287533.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803] gi|228623974|gb|EEK80784.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803] Length = 247 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 39/269 (14%), Positives = 76/269 (28%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 2 EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 61 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ + + ++ + KD+ R+ V + NGK I Sbjct: 62 WDFSHIGYDVYEEGLAIITKHSIIKEDTFFVSENKDTAYWK-TRKIVSATIAYNGKNITF 120 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 121 YSCHLGW----------WNDEEESFKGQIDRLMERVD----SNALAFLMGDFNNNARLEG 166 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + K ID + +Q + Sbjct: 167 EGYEYTMQKGLYDTYELAIEKDEGTTVQGKIAGWDENKHNLRIDLILCNQGKTVRSSKVI 226 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ I N +SDH + + D Sbjct: 227 FNGINRNV---------ISDHFGVEVQLD 246 >gi|229108038|ref|ZP_04237664.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15] gi|228675438|gb|EEL30656.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15] Length = 263 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 35/269 (13%), Positives = 73/269 (27%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 18 EKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGLLLLEELKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ + + ++ + +D+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK-TRKIVSATIAYNGKDITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKGQVDRLMERVD----SNKLAFLMGDFNNNARLKG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +Q S Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQ---------S 233 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +SDH + + D Sbjct: 234 KKVHSSKVIFNGTNRNVISDHFGVEVQLD 262 >gi|260063471|ref|YP_003196551.1| hypothetical protein RB2501_01645 [Robiginitalea biformata HTCC2501] gi|88782915|gb|EAR14089.1| hypothetical protein RB2501_01645 [Robiginitalea biformata HTCC2501] Length = 332 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 82/289 (28%), Gaps = 62/289 (21%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + +R+ S+N +V + LR ++++ADI+ QE+ Y + Sbjct: 94 TEGLRIASFN-------------SGNVLAEADNPAGLRTAMEDINADILCFQELERYGSF 140 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + F + A+ + V S ++ Sbjct: 141 D--VSRYPYRAF------------SPEIIGKSTQAIFSEYPIVRSGSIDFPDTSNN---- 182 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY-------SPSCSLLSQQAQWLKD 193 A+ V + G I + ++HL+S+ ++ Q + Sbjct: 183 ----AIFADVAVKGDTIRIYNVHLESYRIRSERILYREYGGWFLRRFRAVAGQHVSQARL 238 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 ++E+ P +I GDFN I F + Sbjct: 239 VKAHQQEAPYPTIICGDFNATPFSHTYR------ILSAGLEDSFGQAGSGIGATYSLRGL 292 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IDY + D +++ LSDH P+ Sbjct: 293 PYRIDYILADSRMEV------LHHKIFDIH--------LSDHRPVMATL 327 >gi|320170545|gb|EFW47444.1| 2'-phosphodiesterase [Capsaspora owczarzaki ATCC 30864] Length = 663 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 39/362 (10%), Positives = 85/362 (23%), Gaps = 70/362 (19%) Query: 13 LVPCTA---SVAQKVRLVSWNINTLSEQEGV-------SLWKNSVKRTTSDYTLLRQYAK 62 L P + S ++R+V++NI + + ++ + + Sbjct: 300 LAPVSPLERSAGAQLRVVTYNILADVYADSDYARTVLYPYCAPFALKLDYRRQMIARELQ 359 Query: 63 NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS--KRDSNNDIHTAIAVRKKN 120 D D+V LQE+ P F R S + + + ++ + Sbjct: 360 RFDGDLVCLQEVERKQFQTFFEPFMESLGFLGLFRCKTRSIAEGSAMFFRRSQFSLVSSH 419 Query: 121 VRVLQQSYPLLGAKDSFSR-AGNRRAVELLVEINGK--KIWVLDIHLKSFCFL------- 170 L + + +R ++ E +I VL Sbjct: 420 DVALNERWKTAPHCAKLARLLETHSGLQAKFEELSTVAQISVLHQLEHPTGSPARFVIAA 479 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWI--------TQKKESLVPFVIAGDFNRK-------- 214 ++ + + + Q + I Q + + V GDFN Sbjct: 480 NTHLYFHPKANNFRLMQMSVILSEIESAKAALREQHPHARIAVVFCGDFNSWSDRAACKL 539 Query: 215 ------INYLGNNDDFWKTIDPNDSLIRFPKEK-------------------------DS 243 + D + ++ Sbjct: 540 ATMGSIPASHEDWDFLLELASGEENEDASSSSSVNASANTARRLGVDLDHGLHLVSVCGD 599 Query: 244 RCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +D+ + + S + SDH + D+ Sbjct: 600 AAYTNYVGGFNACLDHIFVDSHELAVTSVLPMPSHHEVTTNRALPSVVFPSDHLALVADF 659 Query: 303 DF 304 + Sbjct: 660 RW 661 >gi|238650485|ref|YP_002916337.1| exodeoxyribonuclease III [Rickettsia peacockii str. Rustic] gi|238624583|gb|ACR47289.1| exodeoxyribonuclease III [Rickettsia peacockii str. Rustic] Length = 271 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 79/306 (25%), Gaps = 72/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V+WNIN+L LLR+ A DI+ LQE +++ Sbjct: 1 MKIVTWNINSL----------------RLRIDLLRKLAYEHQPDIILLQETKVADSL--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + S + +A+ K S L + R Sbjct: 42 ------FPLEVIKNIGYEHVIYSGQKSYNGVAIISKFPLNNVFSLELYNSDK-------R 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ +I +V D + + + + +++W+T + Sbjct: 89 HIAAIVNDIEIHNFYV-------PAGGDIPDIEVNTKFKHKLEYVRLMQEWLTTNRTKND 141 Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 +I GD N + + + + Sbjct: 142 KMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSLLVELQNALGFIDSSRHFVSLDEKF 201 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + N L + SDH P Sbjct: 202 YTWWSYRNIDWKKSNRGRRLDHIWVSDNLKGAL-------FSMHLLSEARDWFSPSDHVP 254 Query: 298 ISIDYD 303 + ++ Sbjct: 255 YFVTFN 260 >gi|229367158|gb|ACQ58559.1| Deoxyribonuclease-1 precursor [Anoplopoma fimbria] Length = 273 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 37/284 (13%), Positives = 77/284 (27%), Gaps = 46/284 (16%) Query: 29 WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNT 88 +NI + E + + DI+ +QE+ V Sbjct: 25 FNIKSFGE---------KKASDPVVMGYISEIVCRY--DIILIQEVRDP---RLVATNIL 70 Query: 89 WCIFYSTERLINHSKRDSN------NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 S + K SN R V ++ Y + + + Sbjct: 71 MNYVNSRCPQYAYHKEVSNPLGPSTYKERYLFLYRTTTVSLVGSYYY-----NDTQQLFS 125 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKE 200 R + G+ I ++ H ++ L D + + + Sbjct: 126 RPPFIVKFNDAGRNIVLIPQHTSPKSGQT-------------WKEIDALYDVVTDARAQF 172 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 ++ GDFN +Y+ +D + + + ++ D Sbjct: 173 QTNNIMLLGDFNAGCSYVSRSDWQNIRLFTDKKFDWLIPDSADTTVSHSKCPY----DRI 228 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302 V+ + K ++ S Y + K +SDH P+ + Sbjct: 229 VVTDDLMKEVVSGSAGVFDYELAYGLTPVQAKAVSDHFPVEVAL 272 >gi|254168985|ref|ZP_04875824.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469] gi|197622091|gb|EDY34667.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469] Length = 255 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 86/306 (28%), Gaps = 78/306 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAV 80 ++ L+SWN+N + + + DI+ LQE+ + N Sbjct: 2 ELLLISWNVNGIRACVRNGF---------------LDFLEKYKPDILALQEIKATEDNVP 46 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +V + +++ + ++ A+ K + + DS R Sbjct: 47 MEVRYYPDYHKYWNPAKKKGYA----------GTALFTKIEPLNVKFGIGEDKFDSEGR- 95 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 ++ +K ++++ + + + + L+ L+ Sbjct: 96 --------VITAEYEKFYLVNAYFPNSQHGLTRLDFKIEFDKLIHSYLNELRK------- 140 Query: 201 SLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSR 244 P ++ GDFN + K + K+ Sbjct: 141 -KKPVILCGDFNVAHKEIDLANPKQNVKNAGFTPQERAWMDKFLQDGYIDTFRMFTKEGG 199 Query: 245 CNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 R K +DYFV+ + + +Y SDH P Sbjct: 200 HYTWWTYRFKARERNIGWRVDYFVVSEELKDKVKSSWILSEVY-----------GSDHAP 248 Query: 298 ISIDYD 303 I++ D Sbjct: 249 IAMVLD 254 >gi|157164085|ref|YP_001465973.1| exodeoxyribonuclease III [Campylobacter concisus 13826] gi|112801830|gb|EAT99174.1| exodeoxyribonuclease III [Campylobacter concisus 13826] Length = 252 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 80/304 (26%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + + D + LQE+ Sbjct: 1 MKLISWNVNGLRAVVAKDGFG---------------WLDEVKPDFLGLQEI---KVKEDD 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 PK + + + + + ++ + K Q++ + Sbjct: 43 VPKEIYNLGFKDISVNS-----GARAGYSGVMSLAKFEVQTQKAAFFDDTEGR------- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++E I + +I+ + D + + + + +S Sbjct: 91 -----VLEHRFDDIVLFNIYFPNGQKDDER-------LAYKMDFYEKFLAYCKELVKSGK 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + GD N L + + + + F +A Sbjct: 139 EVIFCGDVNTAHREIDLKNPKANAKTSGFLPIERAWIDEVLKSGFIDTFRAVNGDVADAY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + Q L + SDHCP+ Sbjct: 199 SWWSYRFNARAKNVGWRIDYFFISQGLKDRLKDAFILPEIV-----------GSDHCPVG 247 Query: 300 IDYD 303 I+ + Sbjct: 248 IEIE 251 >gi|145225449|ref|YP_001136127.1| exodeoxyribonuclease III Xth [Mycobacterium gilvum PYR-GCK] gi|315445802|ref|YP_004078681.1| exodeoxyribonuclease III [Mycobacterium sp. Spyr1] gi|145217935|gb|ABP47339.1| exodeoxyribonuclease III Xth [Mycobacterium gilvum PYR-GCK] gi|315264105|gb|ADU00847.1| exodeoxyribonuclease III [Mycobacterium sp. Spyr1] Length = 274 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 79/304 (25%), Gaps = 62/304 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80 V + + N+N + +R+ + +L + K AD+V LQE Sbjct: 4 PVTVSTINVNGIRA--------AIKQRSPENLGML-PWFKETAADVVCLQETRADDAQLA 54 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + P ++ + +AV ++ + +G Sbjct: 55 EALAPVLADGWHLASAE--------PSMKGRNGVAVLSRDPIDEFR----IGCGAEEFAT 102 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R +E + + V ++ + + + ++ + L + + Sbjct: 103 HGRY-----LEADTAGVTVASVYFPTGEAETDRQREKERFMAAVAARMAAL---LQRSVV 154 Query: 201 SLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRC 245 V+ GD+N + + + + + Sbjct: 155 DGHESVLCGDWNIAHTENDIKNWKGNVKKAGFLPQERQWLTEVLGTGWVDVVRQAHPDVA 214 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + IDY + + + R SDHC Sbjct: 215 GPYAWWSWRGKAFDNDAGWRIDYHLATPGLAARATSVL-------TERPAAYALRWSDHC 267 Query: 297 PISI 300 P+++ Sbjct: 268 PVTV 271 >gi|284036131|ref|YP_003386061.1| endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74] gi|283815424|gb|ADB37262.1| Endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74] Length = 372 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 42/295 (14%), Positives = 87/295 (29%), Gaps = 47/295 (15%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 S + +++ S+N+ + E S + +S + +D Y DA I QE + Sbjct: 105 SQGKPIKIFSYNVQSFDLNESWSFYTSSPRVRRTD-----NYVLRYDAPIKCFQEFYNST 159 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 ++ + ++ + + + A+ V P G+ Sbjct: 160 SIPDYNVVLRFRKAGYRYSVLLYPQNALVPEGDIGAAIFSIYPIVDSGREPFGGSN---- 215 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS--------------CSLL 184 V ++I I V+++HL+S T + Sbjct: 216 -----GVVWANIKIGNDTIRVINVHLRSMGIRVGKVLTQKEMKGVKRETRGVLTALHNGF 270 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + + + + I +ES P ++ GD N ++ + + Sbjct: 271 TDRREEVYKVIDYIRESPYPVIVTGDHNDTP-----YSVVYERLRQVLPNSFEDGGRGFG 325 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ I ID+ D + + + SDH PI Sbjct: 326 FTYNRLPGF-IRIDHQFHDPKLP---------VLNFETLNYIGY----SDHYPIV 366 >gi|254517037|ref|ZP_05129095.1| endonuclease/exonuclease/phosphatase [gamma proteobacterium NOR5-3] gi|219674542|gb|EED30910.1| endonuclease/exonuclease/phosphatase [gamma proteobacterium NOR5-3] Length = 395 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 46/385 (11%), Positives = 101/385 (26%), Gaps = 86/385 (22%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNI--NTLS------EQEGVSLWKNSVKRTTSDYTL 56 ++L + + S + +R+ ++N+ + G L + Sbjct: 8 FLLVVALLMPVGAQSEGRVIRVATFNVSMEGGNYVGKGVTPSGHELPAALSNSDHPQISN 67 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKN---------------TWCIFYSTE----- 96 + + + + DIV L E + A+ + FY Sbjct: 68 IAEIIQRVRPDIVLLNEFDYHADPARGVTPFLERYLQQARAGTAAIDYPYFYQGPVNTGV 127 Query: 97 -------------RLINHSKRDSNNDIHTAIAVRKKNVR--VLQQSYPLLGAKDSFSRAG 141 N + + + + +S+ L KD Sbjct: 128 DSGMDLDRDGKASGTGNDAFGFGLYPGQYGMLILSRYPIDFEAIRSFQLFKWKDMPDNLM 187 Query: 142 --NRRA---------------------VELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 R A ++ V ING+ + VL H F + Sbjct: 188 ADMRGADGELWYPEAVQEQLRLSSKSHWDIPVRINGESLHVLASHPTPPVFDGPEDRNGR 247 Query: 179 PSCSLLSQQAQWLK-----DWITQKKE-----SLVPFVIAGDFNRKINYLGNNDDFWKTI 228 + + ++ +I K FV+ GD N + + + Sbjct: 248 RNHDEIRFWVDYIAGGEQAAYIYDDKGQSGGLRGDRFVVVGDLNASMEEGDARREGITAL 307 Query: 229 DPNDSLIR---------FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 ++ + R DS + DY + ++ ++ + F Sbjct: 308 LGHEKVRRGLLPTSDGGRANRADSSFGPAHTASWGMRADYVIPSKSGWRVIDAGVFWPTP 367 Query: 280 YNEDDIKSRGKRLS-DHCPISIDYD 303 + + + S DH + +D + Sbjct: 368 DDPLWRLVKKRSSSSDHRLVWMDLE 392 >gi|302560173|ref|ZP_07312515.1| exodeoxyribonuclease III [Streptomyces griseoflavus Tu4000] gi|302477791|gb|EFL40884.1| exodeoxyribonuclease III [Streptomyces griseoflavus Tu4000] Length = 276 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 33/309 (10%), Positives = 77/309 (24%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 + + S N+N L ++ AD++ LQE+ + Sbjct: 8 LTVTSVNVNGLRAAAKKGF---------------VEWLAGTSADVLCLQEVRAEAKQLPE 52 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 V W + ++ + V + + P S Sbjct: 53 TVREPEGWHVVHAPAAAKGRAG-----------------VSLYTRREPDRVRVGFGSEEF 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + V++ G + V ++L S ++ + L++ Sbjct: 96 DTAGRYVEVDLPG--VTVASLYLPSGEVGTERQDEKMRFMGEFLAHLKGLRERA---AAD 150 Query: 202 LVPFVIAGDFNRKIN----------------YLGNNDDFWKTID--PNDSLIRFPKEKDS 243 V+ GD+N + + +D + Sbjct: 151 GREVVVCGDWNIAHEKADLKNWRGNTKSSGFLPEEREWLSRVLDPADGGYVDVVRALHPD 210 Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + ID V ++ + + +R SD Sbjct: 211 VDGPYSWWSYRGRAFDNDTGWRIDLAVATPGLAGRAVKAYV-------ERAATHAERWSD 263 Query: 295 HCPISIDYD 303 H P+++ ++ Sbjct: 264 HAPVTVVFE 272 >gi|291416360|ref|XP_002724415.1| PREDICTED: DNase X (predicted)-like [Oryctolagus cuniculus] gi|217418274|gb|ACK44278.1| DNase X (predicted) [Oryctolagus cuniculus] Length = 304 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 34/289 (11%), Positives = 71/289 (24%), Gaps = 33/289 (11%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 S A+ R+ ++N L+ + L + DI+ LQE+ + Sbjct: 14 SGAEAFRICAFNTQRLTL---------AKVAKEEVMDTLVRIVARC--DIMVLQEVVDSS 62 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVLQQSYPLLGAKD 135 A F + + + R +VL + Sbjct: 63 DAAISLLLRELNRFDGSGPYRSLKSDMLGRSTYMEKYVYIYRSHKTQVLDSYVY-----E 117 Query: 136 SFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R + K + ++ + L + E L Q Sbjct: 118 DQDDLFAREPFVAHFTLPSKVLPSLVLVPLHTTPKDVEKELNALYDVFLDVSQHWQ---- 173 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 ++ GDFN L + + + D Sbjct: 174 -------NQDVILLGDFNADCASLTKKRLSELLLRTDAGFRWAIADGDDTTVRASTHCAY 226 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 I + + L + + + + ++SDH P+ ++ Sbjct: 227 DRI--VLHGERCQSLLQAAAAFDFPRSFQLTEEEALKISDHYPVEVELS 273 >gi|91205073|ref|YP_537428.1| exodeoxyribonuclease III [Rickettsia bellii RML369-C] gi|157827591|ref|YP_001496655.1| exodeoxyribonuclease III [Rickettsia bellii OSU 85-389] gi|91068617|gb|ABE04339.1| Exodeoxyribonuclease III [Rickettsia bellii RML369-C] gi|157802895|gb|ABV79618.1| Exodeoxyribonuclease III [Rickettsia bellii OSU 85-389] Length = 273 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 38/307 (12%), Positives = 75/307 (24%), Gaps = 76/307 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++V+WNIN+L LL++ A DI+ LQE + Sbjct: 1 MKIVTWNINSL----------------RLRIDLLKRLAYEHQPDIILLQETKVDDPLFPL 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +V + S + +A+ K S L Sbjct: 45 EVIKNIGYEHVI-----------YSGQKSYNGVAIISKLPLQNVSSLELYNGDK------ 87 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + I +V D + + + + +++W+T + Sbjct: 88 -RHIAATVNNIEIHNFYV-------PAGGDIPDIELNSKFKHKLEYIRLMQEWLTNNRTR 139 Query: 202 LVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 +IAGD N + + + + + Sbjct: 140 DDKIIIAGDLNIAPHPHDVWSSKQLRNVISHTDIERSLLVELQNSLEFIDSSRHFVPLDE 199 Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ + N L + SDH Sbjct: 200 KFYTWWSYRNVDWKKSNRGRRLDHIWVSNNLKDEL-------FSIHLLSEARDWMPPSDH 252 Query: 296 CPISIDY 302 P + Sbjct: 253 VPYFVTL 259 >gi|319645540|ref|ZP_07999772.1| hypothetical protein HMPREF1012_00805 [Bacillus sp. BT1B_CT2] gi|317392426|gb|EFV73221.1| hypothetical protein HMPREF1012_00805 [Bacillus sp. BT1B_CT2] Length = 214 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 33/253 (13%), Positives = 74/253 (29%), Gaps = 47/253 (18%) Query: 60 YAKNLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 DI+ L E+ + + ++ + + ++ S DS+ Sbjct: 1 MIAQSGCDIIGLNEVDRHFSNRSDYEDQIGRLAEQLNMHY--AYCPSLSLSSGDSSEKRQ 58 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 A+ + ++ + R +E V I + V HL +L Sbjct: 59 YGNALLTRFPIKKERHH---SFNFVKGLIEGRSLLEADVRIGDRLFRVFVTHLSLNPWLH 115 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 + + I + +ES +P ++ GDFN K G Sbjct: 116 GKQTDF----------------LIEKVQESDLPVIVTGDFNMKPYSRGWKKV------AE 153 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + + + + R + +DY + + + + + Sbjct: 154 KLADLWDESQYGQGFTHPSHRPRRRLDYIFLSPSFHVSAAEIVAVDPN------------ 201 Query: 292 LSDHCPISIDYDF 304 SDH P+ + Sbjct: 202 ASDHLPLKGSITY 214 >gi|322389122|ref|ZP_08062685.1| exodeoxyribonuclease [Streptococcus parasanguinis ATCC 903] gi|321144164|gb|EFX39579.1| exodeoxyribonuclease [Streptococcus parasanguinis ATCC 903] Length = 282 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 38/308 (12%), Positives = 82/308 (26%), Gaps = 56/308 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++L+SWNI++L+ + + + Q DADI+ +QE Sbjct: 5 GNTMKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAEDADIIAIQETKLSAKG 58 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + S ++S + K ++P +GA + Sbjct: 59 PTKKHLEILEELFPQYENTWRSSQESARKGYAGTMFLYKKELSPIVTFPEIGAPSTMDLE 118 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 G + +E +G +V ++ + ++ L + Sbjct: 119 GR----IITLEFDG--FFVTQVYTPNAGDGLKRLAERQVWDVKYAEYLADL--------D 164 Query: 201 SLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 P + GD+N R + + + + F Sbjct: 165 KEKPVLATGDYNVAHKEIDLANPASNRRSPGFTDEEREGFTNLLAKGFTDTFRHVHGDVP 224 Query: 246 NANKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + IDY++ + + + + DH Sbjct: 225 ERYTWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQ-----------DH 273 Query: 296 CPISIDYD 303 PI ++ D Sbjct: 274 TPIVLEID 281 >gi|309782328|ref|ZP_07677055.1| endonuclease/exonuclease/phosphatase [Ralstonia sp. 5_7_47FAA] gi|308918946|gb|EFP64616.1| endonuclease/exonuclease/phosphatase [Ralstonia sp. 5_7_47FAA] Length = 287 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 39/302 (12%), Positives = 88/302 (29%), Gaps = 47/302 (15%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 +++WNI +G S+ R + ++ D++ LQE+ S + P Sbjct: 5 ILTWNIQWGRGADGHV----SLARQLKQAREMAEF------DVLCLQEVTSGFSDLPGQP 54 Query: 86 KNTWCIFYSTERLINHS--------KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + ++ + + + A+ + Q + L D+ Sbjct: 55 GADQWSELADALGSEYTVIGGFALERHNGAHVQRFGNAIATRLPVHYIQRHALPCPPDTT 114 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD-----SLENTYSPSCSLLSQQAQWLK 192 R A+E +V+ + ++ HL+ + L + Q L Sbjct: 115 P-YMPRMAIEAIVQAAFGALRIVTTHLEYYSELQRVAQIDALRAIHTEGCARANQPARLG 173 Query: 193 DWITQ----KKESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRC 245 +I GDFN K + + F + +D+ Sbjct: 174 AEPEAGPFRPLAQTKATIICGDFNCKADSMPKRLATAPFAREPALHDAWEIAHGATPQPP 233 Query: 246 NANKNLRNKIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 R D+ ++ + +++ + + SDH P+ + Sbjct: 234 TFGVYDRADWTEPAYACDFMLISEPLKPRVLRLEIN-----------SATQASDHQPMLL 282 Query: 301 DY 302 + Sbjct: 283 EL 284 >gi|89269844|emb|CAJ82549.1| deoxyribonuclease I-like 3 [Xenopus (Silurana) tropicalis] Length = 295 Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 37/300 (12%), Positives = 81/300 (27%), Gaps = 32/300 (10%) Query: 10 VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 + +++ S+N+ + E S + + ++R+ DI Sbjct: 4 LLLFWALFVPHTLGLQICSFNVQSFGE---------SKRDKPAVMNIVRKVISRC--DIT 52 Query: 70 FLQEMGSYNA-----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 L E+ + + + + R S + + RKK V V Sbjct: 53 LLMEIKDSSDTVIRSLMTQLNSQSETRNQFDLTISQRLGRKSYKEQY-GFIYRKKLVSVR 111 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 +Y ++ A +R + E + I + + E L Sbjct: 112 -GTYQYEDSQPGDPDAFSREPYVVWFEAPSTDVREFVIVPQH----TTPEAAVREIDELY 166 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + W + F+ GD N Y+ + + + +K+ Sbjct: 167 DVYLDVKQKW------NSENFIFMGDLNAGCAYVPKKAWGNIRLRTHSEFVWLIGDKEDT 220 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 I + ++ S + + + L SDH P+ + Sbjct: 221 TVNASTKCAYDRI--VMAGDKLLSSVVPGSAQVFDFMAVYGLTEDQALEVSDHFPVEVQL 278 >gi|294506334|ref|YP_003570392.1| dioxygenase [Salinibacter ruber M8] gi|294342662|emb|CBH23440.1| dioxygenase [Salinibacter ruber M8] Length = 366 Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 34/298 (11%), Positives = 68/298 (22%), Gaps = 51/298 (17%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +R++++N+ + R L + + ++ +QE Sbjct: 100 ADALRVMTFNL------------SPAFARGPDRERTLAELVQREAPAVLSVQETWMKTRS 147 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 A + R +V S + S Sbjct: 148 ASDGGGLFVSWPLRVLLEDSVGYALPRARPPETTIYRPVLGQVRLDSMRVHPLPPSGGSD 207 Query: 141 GNRRAVELLVEINGKKIWVLDIHLK--------------SFCFLDSLENTYSPSCSLLSQ 186 R G+ + ++HL S + TY + Sbjct: 208 PRSRYTRTFFTWQGRPAVLYNVHLHTVGPRPWDLPGTAASLARWRTFLRTYRAGALHRAD 267 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 QA+ + I Q P ++ GDFN + + Sbjct: 268 QARRIHRHIEQ---ETRPVLVTGDFNSTPHQWAYRHLLQGFRAAGGGATFPAGWPLVQ-- 322 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ ++ + +SDH P+ + Sbjct: 323 ----------IDHVLVGPE----------WRVGSATVPGLEATDFVSDHRPVVARVRW 360 >gi|229188637|ref|ZP_04315676.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876] gi|228594826|gb|EEK52606.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876] Length = 263 Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 35/269 (13%), Positives = 73/269 (27%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 18 EKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGLLLLEELKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ + + ++ + +D+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK-TRKIVSATIAYNGKDITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFEGQVDRLMERVD----SNKLAFLMGDFNNNARLEG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +Q S Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQ---------S 233 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +SDH + + D Sbjct: 234 KKVHSSKVIFNGTNRNVISDHFGVEVQLD 262 >gi|300362647|ref|ZP_07058823.1| exodeoxyribonuclease III [Lactobacillus gasseri JV-V03] gi|300353638|gb|EFJ69510.1| exodeoxyribonuclease III [Lactobacillus gasseri JV-V03] Length = 275 Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 86/305 (28%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL+SWNI++L+ + + R + K D DI+ +QE Sbjct: 1 MRLISWNIDSLNAALTSDSARAKLTRG------VLNTIKEKDPDIIAIQETKLRATGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + S + + KN + + P++GA + G Sbjct: 55 KHQEILAEMFPDYDYVWRSSEEPARKGYAGTMFLYKNTLTPEVTKPVIGAPEPMDHEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V ++ + + ++ Q L Sbjct: 114 -----ILTLEFDNYYVTQVYTPNSGNELKRLDDRQVWDEKYTEYLQKLDQV--------K 160 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + +GD+N + + + F K + Sbjct: 161 PVIASGDYNVAHTPIDLKHPENNHHNAGFTDEERQDFDKLLKLGFTDTFRKIHGNVEGVY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY+++ + + + + DHCPI Sbjct: 221 SWWAQRVRTSKANNSGWRIDYYIVSNRIANQITKSEMLDTGERK-----------DHCPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 MLEIN 274 >gi|108759047|ref|YP_634952.1| putative deoxyribonuclease I-like protein [Myxococcus xanthus DK 1622] gi|108462927|gb|ABF88112.1| putative deoxyribonuclease I-like protein [Myxococcus xanthus DK 1622] Length = 287 Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 77/288 (26%), Gaps = 26/288 (9%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P A +R+VSWN+ + +++ + N D+VFLQE+ Sbjct: 19 PTWAQAGSYLRVVSWNLRHEGWTAEQTYREDAEQIWRQYG---ANSNSNNGCDLVFLQEV 75 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + V + + S+ A+ R+ V +L S Sbjct: 76 MNASVVPAIVAELNAVSGVKWRYAQTPLIGRSSYKEIYAVLYREDTVSLLSSSVYE-DTG 134 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D+F R V + G ++ H D +Q + Sbjct: 135 DTFEREPQ--IVRVRHTPTGADYTFINWHTVWGNPSDRDAE---------VKQIGAVFKS 183 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + ++ GD N + + L S N Sbjct: 184 VQDASRTDQDVILVGDHNMACTTASWANLVALSPTVECKLNVATTINLSGGYVNAY---- 239 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D+F M I D + DH PI + Sbjct: 240 ---DHFWMQPEYVTEFSSAGRDYIGNTRDFVTRLA----DHAPIYLTL 280 >gi|91205020|ref|YP_537375.1| exodeoxyribonuclease III [Rickettsia bellii RML369-C] gi|157827649|ref|YP_001496713.1| exodeoxyribonuclease III [Rickettsia bellii OSU 85-389] gi|91068564|gb|ABE04286.1| Exodeoxyribonuclease III [Rickettsia bellii RML369-C] gi|157802953|gb|ABV79676.1| Exodeoxyribonuclease III [Rickettsia bellii OSU 85-389] Length = 261 Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 34/302 (11%), Positives = 85/302 (28%), Gaps = 67/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN +LR + N + D++ LQE+ + Sbjct: 1 MKIATWNIN----------------SIKMRINILRDFLANENPDVLLLQELKCESD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ + +A+ K + ++ R Sbjct: 41 ------KFPFEELSDLPYNFYVHGQKSYNGVAILSKFP----ADEIVKDFPNNHCSDQAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + + ++ ++ + + S + T + ++++ KK Sbjct: 91 F-IEARISLPIGFCNIISLYAPNGSMVGSDKFTAKLAF------YDSFFNYLSSKKSFDE 143 Query: 204 PFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCNA-------NK 249 +I GDFN + + I+ + Sbjct: 144 KTIIGGDFNIAPFDIDVYSPTALANTTCFTEIEQKKMRTILNSGFEDCYRFLHPKKQEFS 203 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + ID + N+ +L D ++ SDH P+ Sbjct: 204 WWDYRAGCFEQNKGMRIDMILGSNNSIDYLENCYM-------DYNLRTKEKPSDHIPVIA 256 Query: 301 DY 302 ++ Sbjct: 257 NF 258 >gi|305666072|ref|YP_003862359.1| exodeoxyribonuclease [Maribacter sp. HTCC2170] gi|88707506|gb|EAQ99749.1| exodeoxyribonuclease [Maribacter sp. HTCC2170] Length = 253 Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 87/302 (28%), Gaps = 73/302 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+N+N + + K D D++ LQE+ K Sbjct: 1 MKIVSYNVNGIRAAINKGF---------------LDWLKATDPDVICLQEI-------KA 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + N+ + ++ +A+ K Q + G + R Sbjct: 39 MKEQLDLSLFEEAGYANNYWYSAQKKGYSGVAILSKK----QPDHVEYGTGIDYMDFEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + ++ ++L S +D + + ++ +++ Sbjct: 95 N-----LRADFDGVSIMSLYLPSGTNMD--------RLEFKLKYMAEFQRYVDDLRKAHP 141 Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249 +I GD+N + +D W I + + + Sbjct: 142 NLIILGDYNICHEAIDIHDPVRNKKVSGFLPVEREWIGSFIESGFIDSFRHLNKEPHNYT 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +DY ++ + L + R SDHCPI + Sbjct: 202 WWSYRANARNNNKGWRLDYGMVSEPLENRLKRSVIL-----------SDARHSDHCPILV 250 Query: 301 DY 302 + Sbjct: 251 EL 252 >gi|229586510|ref|YP_002845011.1| Exodeoxyribonuclease III [Rickettsia africae ESF-5] gi|228021560|gb|ACP53268.1| Exodeoxyribonuclease III [Rickettsia africae ESF-5] Length = 271 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 79/306 (25%), Gaps = 72/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V+WNIN+L LLR+ A DI+ LQE +++ Sbjct: 1 MKIVTWNINSL----------------RLRIDLLRKLAYEHKPDIILLQETKVADSL--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + S + +A+ K S L + R Sbjct: 42 ------FPLEVIKNIGYEHVIYSGQKSYNGVAIISKFPLNNVFSLELYNSDK-------R 88 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ +I +V D + + + + +++W+T + Sbjct: 89 HIAAIVNDIEIHNFYV-------PAGGDIPDIEVNTKFKHKLEYVRLMQEWLTTNRTKND 141 Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 +I GD N + + + + Sbjct: 142 KMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSLLVELQNALGFIDSSRHFVSLDEKF 201 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + N L + SDH P Sbjct: 202 YTWWSYRNIDWKKSNRGRRLDHIWVSDNLKGAL-------FSMHLLSEARDWSSPSDHVP 254 Query: 298 ISIDYD 303 + ++ Sbjct: 255 YFVTFN 260 >gi|241662748|ref|YP_002981108.1| endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12D] gi|240864775|gb|ACS62436.1| Endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12D] Length = 287 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 39/302 (12%), Positives = 88/302 (29%), Gaps = 47/302 (15%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 +++WNI +G S+ R + ++ D++ LQE+ S + P Sbjct: 5 ILTWNIQWGRGADGHV----SLARQLKQAREMAEF------DVLCLQEVTSGFSDLPGQP 54 Query: 86 KNTWCIFYSTERLINHS--------KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + ++ + + + A+ + Q + L D+ Sbjct: 55 GADQWSELADALGSEYTVIGGFALERHNGAHVQRFGNAIATRLPVHYIQRHALPCPPDTT 114 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD-----SLENTYSPSCSLLSQQAQWLK 192 R A+E +V+ + ++ HL+ + L + Q L Sbjct: 115 P-YMPRMAIEAIVQAAFGALRIVTTHLEYYSELQRVAQIDALRAIHTEGCARANQPATLG 173 Query: 193 DWITQ----KKESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRC 245 +I GDFN K + + F + +D+ Sbjct: 174 AEPEAGPFRPLAQTKATIICGDFNCKADSMPKRLATAPFAREPALHDAWEIAHGATPQPP 233 Query: 246 NANKNLRNKIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 R D+ ++ + +++ + + SDH P+ + Sbjct: 234 TFGVYDRADWTEPAYACDFMLISEPLKPRVLRLEIN-----------SATQASDHQPMLL 282 Query: 301 DY 302 + Sbjct: 283 EL 284 >gi|293190142|ref|ZP_06608680.1| 5'-nucleotidase family protein [Actinomyces odontolyticus F0309] gi|292821118|gb|EFF80070.1| 5'-nucleotidase family protein [Actinomyces odontolyticus F0309] Length = 788 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 46/350 (13%), Positives = 85/350 (24%), Gaps = 73/350 (20%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVS--LWKNSVKRTTS-------------------- 52 P +V R+ ++N+ GV RT + Sbjct: 363 PSPPTVGGDTRVATFNVLNYFSDLGVDESGCSGYPDRTGAFVTAKKCKVRGAFSREAFAN 422 Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNA----------VAKVFPKNTWCIFYSTERLINHS 102 + L AD+V L+E+ + A +A++ T + Sbjct: 423 QEAKIVSAINALGADVVALEEIENPVAVGVGTDRDATLARLVEALNKAAGDGTWAYVPSP 482 Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV------EINGKK 156 + IA K + P L D R+ + Sbjct: 483 PSVPQGEDVIRIAFIYK-PATIAPVGPSLIHDDPAFTGLARQPLAQEFARVTGQRAAPAT 541 Query: 157 IWVLDIHLKSFCFLDSLENTYS--------PSCSLLSQQAQWLKDWITQKKESLVPFVIA 208 V+ H KS + + + ++ QA L + + + P ++ Sbjct: 542 FVVIGNHFKSKGSVPEGAPPGNVDNGDGQGNANAIRVAQATSLASFAARFADK--PTLLV 599 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 GDFN + + + + +D+ + A Sbjct: 600 GDFNSYSQEDPIKAL---------EASGWARVSGAGEASYVYAGRSGSLDHVFSNAAAKP 650 Query: 269 FLIQESFSEILYNEDDIKSRG---------------KRLSDHCPISIDYD 303 L + + E R SDH P I Sbjct: 651 LLSGVTSWAVNAQESIAFEYSRAGMNAHLTIEADNPYRSSDHNPEIIGLT 700 >gi|51261555|gb|AAH80151.1| deoxyribonuclease 1-like 3 [Xenopus (Silurana) tropicalis] Length = 295 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 37/300 (12%), Positives = 82/300 (27%), Gaps = 32/300 (10%) Query: 10 VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 + +++ S+N+ + E S + + ++R+ DI+ Sbjct: 4 LLLFWALFVPHTLGLQICSFNVQSFGE---------SKRDKPAVMNIVRKVISRC--DIM 52 Query: 70 FLQEMGSYNA-----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 L E+ + + + + R S + + RKK V V Sbjct: 53 LLMEIKDSSDTVIRSLMTQLNSQSETRNQFDLTISQRLGRKSYKEQY-GFIYRKKMVSVR 111 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 +Y ++ A +R + E + I + + E L Sbjct: 112 -GTYQYEDSQPGDPDAFSREPYVVWFEAPSTDVREFVIVPQH----TTPEAAVREIDELY 166 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + W + F+ GD N Y+ + + + +K+ Sbjct: 167 DVYLDVKQKW------NSENFIFMGDLNAGCAYVPKKAWGNIRLRTHSEFVWLIGDKEDT 220 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 I + ++ S + + + L SDH P+ + Sbjct: 221 TVKASTKCAYDRI--VMAGDKLLSSVVPGSAQVFDFMAVYGLTEDQALEVSDHFPVEVQL 278 >gi|328705662|ref|XP_001947380.2| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Acyrthosiphon pisum] Length = 572 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 38/342 (11%), Positives = 90/342 (26%), Gaps = 61/342 (17%) Query: 23 KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 V ++ +N+ + + + ++ ++ ADI+ LQE+ + Sbjct: 214 PVTVMCYNVLCEKYATTQMYGYCPSWALSWDYRKKVILGEIRHYTADIITLQEVETDQFY 273 Query: 81 AKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 P+ + S +++ + Q + Sbjct: 274 NFFLPELKKDGYDGVFSPKSRAKTMSENDRKRVDGCAIFFRAIKFTLIKEHLIEFNQLAM 333 Query: 129 PLLGAKDSF-SRAGNR--RAVELLVEINGKKIWV---------LDIHLKSFCFLDSLENT 176 D +R R + L++ N + + + + Sbjct: 334 ANSSGSDDMLNRVMPRDNIGLAALLKTNETAWENSLPSEVQQPILVCTAHIHWDPEFCDV 393 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVP------FVIAGDFNRKINY------------- 217 +LS + + + + ++ ++ GDFN + Sbjct: 394 KLIQIMMLSNELNTILEDANRNYRNVNHHQPPIQLLLCGDFNSLPDSGVIEFLSAGKVSS 453 Query: 218 --LGNNDDFWKTIDPNDSLIRFPKEKDSRC-----------NANKNLRNKIPIDYFVMD- 263 D +KT+ S P E N K IDY Sbjct: 454 DHQDFKDLQYKTLLHKISTCDRPNEFMHSFKLSSAYENIMPFTNYTFNFKGIIDYIFYTR 513 Query: 264 QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303 Q + + + ++ + SDH P+ ++++ Sbjct: 514 QTMTPLGLLGPLAPEWFKDNKVLGCPHPHIPSDHFPLLVEFE 555 >gi|307353178|ref|YP_003894229.1| deoxyribonuclease I [Methanoplanus petrolearius DSM 11571] gi|307156411|gb|ADN35791.1| Deoxyribonuclease I [Methanoplanus petrolearius DSM 11571] Length = 431 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 34/284 (11%), Positives = 81/284 (28%), Gaps = 33/284 (11%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++ + ++N+ +L DIV +QE+ + A Sbjct: 50 DEITVGAFNVQVFGTT---------KASNDEVMDILSDIICRY--DIVAIQEIRDSSGTA 98 Query: 82 KV-FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + S +I+ +++ +A V + S P + S + Sbjct: 99 ILDLMEKVDKKNPSYAYVISERLGRTSSKEQSAYIYNTAKVNL--SSTPQTYPEPSGTDP 156 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +R + + + D+ T+ Sbjct: 157 FHREPFIASFSSTEGSFIATFATIHTDP----------DEAEEEIDALTDVADYCTEILP 206 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 ++ GDFN +Y +D + + + D+ + D Sbjct: 207 EDEMVILMGDFNADCSYFDEDDA-SSPLRSGEYSWLIGNDLDTTTKST-----DCTYDRI 260 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRG--KRLSDHCPISIDY 302 V+ + K+ + I ++E + + +SDH P+ + Sbjct: 261 VVLGDYQKYYTGD-AGVIRFDELYDLDQDLTEDVSDHYPVYAKF 303 >gi|229148769|ref|ZP_04277019.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550] gi|228634777|gb|EEK91356.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550] Length = 263 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 34/269 (12%), Positives = 74/269 (27%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWC------------IFYSTERLI 99 L + + + D++ LQE+ V ++ + Sbjct: 18 EKIKYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELKALYVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ + + ++ + +D+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK-TRKIVSTTIAYNGKDITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKGQVDRLMERVD----SNKLAFLMGDFNNNARLEG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +Q S Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQ---------S 233 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +SDH + + D Sbjct: 234 KKVHSSKVIFNGTNRNVISDHFGVEVQLD 262 >gi|154492338|ref|ZP_02031964.1| hypothetical protein PARMER_01972 [Parabacteroides merdae ATCC 43184] gi|154087563|gb|EDN86608.1| hypothetical protein PARMER_01972 [Parabacteroides merdae ATCC 43184] Length = 353 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 75/305 (24%), Gaps = 71/305 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + + +V++N + ++ + Y K L DI+ QE Sbjct: 93 AASEQAGTPLTVVTYNASHFYWDRKYTMNEA------------AAYIKQLQPDIICFQEA 140 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + YP+ K Sbjct: 141 PGDGYYHRDSIRYAFDYVLYKYISRRTDH----------------LPTTIYSRYPIHSVK 184 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC--------------------FLDSLE 174 + + + ++ V IN + I V++ H ++ + L Sbjct: 185 ALYYKNSSNMSLIADVRINNQYIRVINNHFETTSVNAYRGIITAPGKSLEVRAKAVKDLI 244 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + ++QA + I + S P ++ GDFN + Sbjct: 245 LKMKNNYLKRAEQADSIHAEI---ERSPYPVLVCGDFNDTPASYTYHQL------RKGLT 295 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 F + L IDY + D S SD Sbjct: 296 DGFRDCGSGYQYTFRQLYKLWRIDYVFYSE--------------FLKGQDCFSPDAPYSD 341 Query: 295 HCPIS 299 H + Sbjct: 342 HNMVV 346 >gi|118594300|ref|ZP_01551647.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth [Methylophilales bacterium HTCC2181] gi|118440078|gb|EAV46705.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth [Methylophilales bacterium HTCC2181] Length = 259 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 92/308 (29%), Gaps = 80/308 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VA 81 +++++ N+N + + + ++ K + D + +QE+ + A + Sbjct: 1 MKIITLNLNGIRA---------------ASRKGMLEWLKLENPDFICVQELKAQEADLTS 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + F+S +S + I +V PL+ Sbjct: 46 DMLNPYGYMGFFSYAVKKGYSGVGIYSKI-------SPLQQVNNTGVPLIDD-------E 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R A + + ++ ++L S + +N + Q + + + +K Sbjct: 92 GRYAEFI-----FENFSIISLYLPSGSSGEERQN-------VKYQVLEDIMRILKKKISQ 139 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + GDFN + D + + K Sbjct: 140 TKYVAVCGDFNIAHHEIDLKNFKGNKKNSGFLPEERDWLSTLFSKLQWVDVYRKISPHTT 199 Query: 246 -NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 +A N+ IDY + +QN + S + KR SDH Sbjct: 200 EDAYTWWSNRGQAWVNNVGWRIDYQIANQNLANKALSASV-----------YKEKRFSDH 248 Query: 296 CPISIDYD 303 P+ I+Y Sbjct: 249 APLIINYS 256 >gi|322377529|ref|ZP_08052020.1| exodeoxyribonuclease III [Streptococcus sp. M334] gi|321281729|gb|EFX58738.1| exodeoxyribonuclease III [Streptococcus sp. M334] Length = 275 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 78/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K ++P +GA S R Sbjct: 55 KHLEILEELFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAP-STMDLEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +V ++ + ++ L + Sbjct: 114 I-----ITLEFDEFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAQL--------DKEK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 VMEIE 274 >gi|312867077|ref|ZP_07727287.1| exodeoxyribonuclease III [Streptococcus parasanguinis F0405] gi|311097206|gb|EFQ55440.1| exodeoxyribonuclease III [Streptococcus parasanguinis F0405] Length = 275 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 79/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q DADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAEDADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K ++P +GA S R Sbjct: 55 KHLEILEELFPGYEKTWRSSQEPARKGYAGTMFLYKKELTPVVTFPEIGAP-STMDLEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + K +V ++ + ++ L + Sbjct: 114 I-----ITLEFDKFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAEL--------DKEK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + + F Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEEREGFTNLLAKGFTDTFRHVHGDVPERY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 VLEID 274 >gi|323359561|ref|YP_004225957.1| hypothetical protein MTES_3113 [Microbacterium testaceum StLB037] gi|323275932|dbj|BAJ76077.1| hypothetical protein MTES_3113 [Microbacterium testaceum StLB037] Length = 340 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 36/284 (12%), Positives = 76/284 (26%), Gaps = 49/284 (17%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +R+++WN + + Q+A ++ AD+V L E Sbjct: 101 ATSLRVMTWNTAGAATS----------------AESIAQFAVDMQADVVTLPETTIDTGT 144 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + T + +R + S S + + Sbjct: 145 R--VAELMRDMGRPMWAHHAEYGVTGWGATSTTVLIR---PELGDYSVIDSSLDGSSNTS 199 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 AV + V +G + + + + + L+ Q Sbjct: 200 TVPSAVAMPVSGDGP----IIVAAHAVAPREDYMTQWRSDLKWLADQCA----------- 244 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-NKIPIDY 259 ++AGDFN I+++ T+ PID+ Sbjct: 245 -SDNVILAGDFNATIDHMTGLGVDGGTLGRCRDTTSASGNGGVGTWPTDIPAILGAPIDH 303 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + + S + SDH P+ + + Sbjct: 304 VMATPD---WTVSGSIVMRTLDGS--------GSDHRPVVVQLE 336 >gi|148653450|ref|YP_001280543.1| endonuclease/exonuclease/phosphatase [Psychrobacter sp. PRwf-1] gi|148572534|gb|ABQ94593.1| Endonuclease/exonuclease/phosphatase [Psychrobacter sp. PRwf-1] Length = 341 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 42/317 (13%), Positives = 90/317 (28%), Gaps = 47/317 (14%) Query: 26 LVSWNINTLSEQE---GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + + N+ + ++ S L Q +N ADI QE+ A+ Sbjct: 15 IATSNLLNFALPNRTYYANMDAYSQSEYQRKLNGLHQLLRNAKADIYAFQEVWDEKALQD 74 Query: 83 V-----FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG----- 132 + F + ++ + + A+ + K + Q Sbjct: 75 LAVKLGFEPSQVLAPMASNEPSSQLTKGKGAQDTPALGIISKFNVIDWQLLTNFDPLAVV 134 Query: 133 --AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF----------------LDSLE 174 ++ NR + + +++ G+ I V+ HLKS Sbjct: 135 DIPDQGLYKSFNRPPLVVTLDVYGQPITVITAHLKSKRPQYIRDEAGGRVEDYNDPLLRV 194 Query: 175 NTYSPSCSLLSQQAQWLKDW-ITQKKESLVPFVIAGDFNRKINYLG------------NN 221 S + + +A L+ + I + + P ++ GD N + + + Sbjct: 195 RAKLRSLCMRAAEAAALRLFMIDKLHNTRHPLILLGDMNDVTDSVTTQLLAETSEVIYDK 254 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY---KFLIQESFSEI 278 + + + ID + + KF + E Sbjct: 255 SMRDVALFDAARVQTSYGWMRDVAYTHLYQGMPEVIDQLFVSEEFLVDGKFSLGEVERVD 314 Query: 279 LYNEDDIKSRGKRLSDH 295 +N+ + R SDH Sbjct: 315 YFNDHLKQDYQDRYSDH 331 >gi|26986873|ref|NP_742298.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida KT2440] gi|148545402|ref|YP_001265504.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida F1] gi|24981475|gb|AAN65762.1|AE016202_5 conserved hypothetical protein [Pseudomonas putida KT2440] gi|148509460|gb|ABQ76320.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida F1] Length = 284 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 37/292 (12%), Positives = 83/292 (28%), Gaps = 58/292 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 ++RL+S+NI E + + + + + D D+V L Sbjct: 28 PEDGRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHNGRAGNLQKIGRLLG--DFDLVAL 85 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE + + + R+ + V + L + +PL Sbjct: 86 QEADGGSLRSGYVNQVEHLAHLGAFPYWYQQLNRNLGRFAQHSNGVLSRLKPQLLEDHPL 145 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G R A+ + + V+ +HL + Q + Sbjct: 146 PGPAG-------RGAILVRFGEGEDALIVVMMHLALG-------------AKTRALQLGY 185 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 +++ I V+ GD N L + + + + + Sbjct: 186 IRELIGGY----RHQVLMGDMNTHATDLLEHSPL-RDLGLVAPQVEAT---------FPS 231 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + +D+ ++ + ++ I SDH P++++ Sbjct: 232 WRPQRCLDHILLSSSLTLERVEVLAQPI--------------SDHLPVAVEI 269 >gi|324991375|gb|EGC23308.1| exodeoxyribonuclease [Streptococcus sanguinis SK353] Length = 275 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 82/305 (26%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q + +ADI+ +QE + Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLS------QAVLQTLQAENADIIAIQETKLSASGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K ++P +GA S R Sbjct: 55 KHLEILTNLFPEYENTWRSSQEPARKGYAGTMFLYKKELTPIVTFPEIGAP-STMDVEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +V ++ + + + ++ L + Sbjct: 114 I-----ITLEFDDFFVTQVYTPNAGDGLKRLDDRQVWDAKYAEYLARL--------DGQK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F N Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNKY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 VMEIE 274 >gi|307180084|gb|EFN68152.1| Putative neutral sphingomyelinase [Camponotus floridanus] Length = 360 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 31/265 (11%), Positives = 71/265 (26%), Gaps = 28/265 (10%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 + + + + + DI+ LQE+ S I + ++ +S + + + Sbjct: 27 RMSAIAEKCASREYDIICLQEVWSVEDFK--------VIKAKVQEILPYSHYFYSGVVGS 78 Query: 113 AIAVRKKNVRVLQQSYPLL-----GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 + + + + G + ++I I V HL + Sbjct: 79 GVCILSRYPIYDVMFHKWPLNGYVHKIHHGDWFGGKGVGLCKIKILNMNINVYTAHLHA- 137 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 + QA ++ ++AGD N + L Sbjct: 138 ----EYNRENDEYMAHRVLQAFDTAQFVRMTSGGADAVILAGDLNTEPQDLAYRIIRGVG 193 Query: 228 IDPNDSLIRFPKEKDSRCNANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 + + C N + ID+ + + + +F L Sbjct: 194 GLMDACPSSASHIGTNECANNSYTCSKFARTRPDGKRIDHILYLGSKSVKVEITNFQHPL 253 Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304 + + + SDH + F Sbjct: 254 --PNRVPYKDFSYSDHEAVMATLKF 276 >gi|254452409|ref|ZP_05065846.1| endonuclease/exonuclease/phosphatase family [Octadecabacter antarcticus 238] gi|198266815|gb|EDY91085.1| endonuclease/exonuclease/phosphatase family [Octadecabacter antarcticus 238] Length = 290 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 81/296 (27%), Gaps = 38/296 (12%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + +R+ ++N++ + G + SV L+ +LDAD+V QEM Sbjct: 22 PVQSPSRDTLRVATYNVHYI--WLGRAQGDWSVGDWERRKGALQAAFVSLDADVVGFQEM 79 Query: 75 GS-------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 S N + + + Sbjct: 80 ESFGRGQAPQNLTLDWLREQNPGYAAAAVGDPAVFPSTQPIFYRKDRLTLRDQGWFFFSD 139 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 P + +F+ + E +G V ++H + + + + + Sbjct: 140 TPDVIYSRTFNGSWPAFTSWAEFEDRDGTIFRVYNLHTEYRSMSNKQLSVALVAARIAEP 199 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 A+ P + GDFN ++ + + S + Sbjct: 200 AARM-------------PVFVIGDFNAIRGST-----TLGVLEDANVTFWPVQG--STFH 239 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N+ L ID+ S + G+ +DH P+ D+ Sbjct: 240 FNRGLNLFPAIDHIGGSDGISPVGKTFSVR--------GRFDGEWATDHYPVVGDF 287 >gi|167566600|ref|ZP_02359516.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia oklahomensis EO147] Length = 526 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 34/254 (13%), Positives = 79/254 (31%), Gaps = 30/254 (11%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N+ N + + + R +Y + K L+AD++ L E+ Sbjct: 284 LRVASFNVLNYFNGDGTGGGFDDPNNRGAKNYDEFVRQDAKIVSALKALNADVIGLMEIE 343 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + R+++ R + I A+ + V+ P+ A Sbjct: 344 NDGYGELSAVRQLAAKLGDGWRVVDPGIARLGGDAISVALIYDSRKVK------PVGEAA 397 Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186 NR+ + + + V HLKS + + + ++ Sbjct: 398 TLAIDDKNRQPLAQTFRPVGGSRAVTVAVNHLKSKNCPSATGDDLDQGDGQGCWNATRTR 457 Query: 187 QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 A + DW+ + ++ GD N +T++ + + + Sbjct: 458 AASKVADWLARTPTGVPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKIGAG 512 Query: 245 CNANKNLRNKIPID 258 + +D Sbjct: 513 AYSYVYNGEAGYLD 526 >gi|24649581|ref|NP_732965.1| twin, isoform A [Drosophila melanogaster] gi|24649583|ref|NP_732966.1| twin, isoform E [Drosophila melanogaster] gi|28572072|ref|NP_788732.1| twin, isoform F [Drosophila melanogaster] gi|17862252|gb|AAL39603.1| LD18435p [Drosophila melanogaster] gi|23172141|gb|AAF56259.2| twin, isoform A [Drosophila melanogaster] gi|23172142|gb|AAF56258.2| twin, isoform E [Drosophila melanogaster] gi|28381449|gb|AAO41599.1| twin, isoform F [Drosophila melanogaster] gi|220953408|gb|ACL89247.1| twin-PA [synthetic construct] Length = 552 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 40/343 (11%), Positives = 94/343 (27%), Gaps = 63/343 (18%) Query: 24 VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++ +N+ + + ++ + + ++ ADI+ LQE+ + Sbjct: 192 FTVMCYNVLCDKYATRQMYGYCPSWALCWEYRKKSIIDEIRHYAADIISLQEIETEQFYH 251 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLL------ 131 P+ + + +K S + AI R ++++S Sbjct: 252 FFLPELKNDGYEGIFSPKSRAKTMSELERKYVDGCAIFFRASKFTLIKESLIEFNQLAMA 311 Query: 132 ---GAKDSFSRAGNR-----RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 G+ + +R + A+ + E + + + + + + C + Sbjct: 312 NAEGSDNMLNRVMPKDNIGLAALLKVKENAWEPMSEVTQISQPLLVCTAHIHWDPEFCDV 371 Query: 184 LSQQAQWLKDWITQKKESLVP--------------FVIAGDFNRKINYLGN--------- 220 Q L + + + ++ GDFN + Sbjct: 372 KLIQTMMLSNELKTIIDEASHSFRPGHKNDSNAVQLLLCGDFNSLPDSGVVEFLGKGRVS 431 Query: 221 ----------NDDFWKTIDPNDSLIRFPKEKDSRCN-------ANKNLRNKIPIDYFVMD 263 + + ND+ K + N K IDY Sbjct: 432 MDHLDFKDMGYKSCLQRLLSNDTNEFTHSFKLASAYNEDIMPHTNYTFDFKGIIDYIFYT 491 Query: 264 QNAYK---FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + L S + N+ SDH P+ ++ + Sbjct: 492 KTGMVPLGLLGPVSNDWLRENKVVGCPHPHIPSDHFPLLVELE 534 >gi|71834576|ref|NP_001025390.1| sphingomyelin phosphodiesterase 2, neutral [Danio rerio] gi|68563437|dbj|BAE06149.1| Mg2+-dependent neutral sphingomyelinase [Danio rerio] Length = 420 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 88/306 (28%), Gaps = 46/306 (15%) Query: 17 TASVAQKVRLVSWN---INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 K+R+ S N I LS+ Y ++ + DI LQE Sbjct: 2 APQQPGKLRVFSLNCWGIRFLSKL------------CAQRYEMIGELLGREQHDIALLQE 49 Query: 74 MGSYNAV----AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 + S K+ + + ++ + + + S + I A+ + Sbjct: 50 VWSERDFLFLKRKLSCSHPYTHYFKSGVIGSGLAVFSKHRIQDALLYQYSL-------NG 102 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 G + A ++VE+ G K V HL + Q+ Sbjct: 103 YPYMLSHGDWFGGKAAGLVIVEVFGLKAHVYVTHLHA-----EYSRAQDGYLPHRIVQSW 157 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLG-----NNDDFWKTIDPNDSLIRFPKEKDSR 244 L+ ++ ++ GD N + LG ++ D Sbjct: 158 ELQQFVRHTSHGADLVILGGDLNMHPSDLGNRLLRSHTGLRGCYTETDKFDGCEDGHTLI 217 Query: 245 CNANKN-------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N + I IDY +M + + ES S + D SDH Sbjct: 218 ANNHFTKKQDLIPFEKGIRIDYILMKGSQRVSVKCESLSTTKGSVSDKP---FPYSDHEA 274 Query: 298 ISIDYD 303 + D + Sbjct: 275 LMADLN 280 >gi|325292791|ref|YP_004278655.1| endonuclease/exonuclease/phosphatase family protein [Agrobacterium sp. H13-3] gi|325060644|gb|ADY64335.1| endonuclease/exonuclease/phosphatase family protein [Agrobacterium sp. H13-3] Length = 267 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 74/276 (26%), Gaps = 50/276 (18%) Query: 55 TLLRQYAKNLDADIVFLQEMGSYNA------------------------VAKVFPKNTWC 90 L Y D DI+ LQE+ A V + P + Sbjct: 15 DELVPYISASDPDILCLQEVVHTPAAEEDWLSYRDDGRDLPQRANFLRDVEEALPDHLAI 74 Query: 91 IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS---YPLLGAKDSFSRAGNRRAVE 147 +++ + H + + A VRK V Q + A +R Sbjct: 75 FCPASQGDLWHGETRYPSQWGLATFVRKSIAIVAQAQGFVHGCFSANGYGDHPRSRTGHA 134 Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207 + V + H+ + QA+ L + E ++ Sbjct: 135 VRVFDFTTGQPAVIAHMH-----GLRDPNGKHDIPARLMQAKRLVKLVKDIAEDGDRIIV 189 Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 GDFN + + D + + + + DY +++ Sbjct: 190 CGDFNVLPESD-----TFTVLKELDLIELVTTRGFTDTRTSHYAKQNRFADYMLVNP--- 241 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ +SDHCP+ I++ Sbjct: 242 ------VVQVDHFDVVRQPE----VSDHCPLLIEFS 267 >gi|152964513|ref|YP_001360297.1| endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans SRS30216] gi|151359030|gb|ABS02033.1| Endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans SRS30216] Length = 344 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 41/291 (14%), Positives = 79/291 (27%), Gaps = 61/291 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+ ++N + R + D+V LQE+ Sbjct: 104 DLRVATFNT--------------TNWRGAEGLE---DLLRRGRPDVVALQEVVPSQQRDY 146 Query: 83 --VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 VFP+ + + ST + AV K V + L Sbjct: 147 AGVFPEYPYRSYTSTSTGGSREGD--------GDAVWSKYPIVSVEPVTGLPE------- 191 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCF-------LDSLENTYSPSCSLLSQQAQWLKD 193 G R A + +++ G+++ VL +HL S C + + + +A+ D Sbjct: 192 GARPADVVTLDVEGRRLAVLSVHLASPCLLCSPDKVARNPAGNTGDAARVRVAEARRYAD 251 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 + S V+ GD N + + + + Sbjct: 252 LARSLQASGAAVVLGGDLNSAEFNEPLRELRSHGLVDVHRAVGTRPGLTRGASPGF---- 307 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +D ++ + R S H P+ D + Sbjct: 308 -ARVDVVLV---------------AGLEPVAVAERAPGGSTHSPVVADLAW 342 >gi|225714724|gb|ACO13208.1| Deoxyribonuclease gamma precursor [Esox lucius] Length = 266 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 38/282 (13%), Positives = 82/282 (29%), Gaps = 25/282 (8%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +++ S+NI + +L + D +V L+E+ + +AV K Sbjct: 1 MKIASFNIQRFGKH---------KLSDPQILAILVKIVSRYDM-LVVLEEVDANGSAVKK 50 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + ++ + + + ++N+ L S+ + A Sbjct: 51 FLEELNKANKEHRYTMQVSTRLGRDTYKEQYLFLYRENMVELVGSWQYEDKQPGDEDAFA 110 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R L K ++ + L E++ L + K W Sbjct: 111 REPFILRF----KCLYTVLEDLVMIPVHTKPEDSVKELDKLYDVFLEVKKKW------KT 160 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 + GDFN +Y+ I + + N N I V Sbjct: 161 DNVMFLGDFNADGSYVSAKRMKTIRIRSDKHFHWLIADDVDTTANNSNDYTYDRI--VVY 218 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302 + ++ S + + ++SDH P+ + Sbjct: 219 GDDMLDAVVPNSAKPFNFQNAYGLNDTGTLKVSDHYPVEVVL 260 >gi|293365984|ref|ZP_06612686.1| exodeoxyribonuclease [Streptococcus oralis ATCC 35037] gi|291315527|gb|EFE55978.1| exodeoxyribonuclease [Streptococcus oralis ATCC 35037] Length = 275 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 79/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K S+P +GA S R Sbjct: 55 KHLEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDLEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++ +V ++ + ++ L + Sbjct: 114 I-----ITLEFEEFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAQL--------DKEK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHLHGDVPECY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 VLEIE 274 >gi|158315736|ref|YP_001508244.1| endonuclease/exonuclease/phosphatase [Frankia sp. EAN1pec] gi|158111141|gb|ABW13338.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EAN1pec] Length = 470 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 44/345 (12%), Positives = 88/345 (25%), Gaps = 72/345 (20%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK---------------RTTSDYTLLRQ 59 P V +++ + ++N+ ++ + + + + + + Sbjct: 108 PPDGPVTKQLTVNTYNLYLGADLTPIVTAPDQQEMINQARIAYEHVLWADFPARAQAIAK 167 Query: 60 YAKNLDADIVFLQE----------------MGSYNAVAKVFPKNTWCIFYSTERLINHSK 103 D++ LQE + + K + + E + Sbjct: 168 LLARQRPDVLGLQEVALWQEGPIGGPLRTTVDYLPILQKALKERGLNYEVAAENTNFSGQ 227 Query: 104 ------RDSNNDIHTAIAVRKKNVRVLQQSYPLLG--------AKDSFSRAGNRRAVELL 149 R H AI VR Q S+P + R + Sbjct: 228 LPISATRQVRFTDHDAILVRTGIPGRWQVSHPESHEYVARLTLPTAAGPFTITRGWSAVD 287 Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209 V GK + V + HL+ + + QA L + + P ++ G Sbjct: 288 VTARGKTVRVANTHLEPVSP------------QVRNAQANELYSAL---VTATRPVILLG 332 Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK------NLRNKIPIDYFVMD 263 D N + + L + D A + IDY + Sbjct: 333 DLNSQPSDLTGPYGLFTQ-GGYTDAWATIHGPDGGFTATQIELDVMPSTLDRRIDYVLYQ 391 Query: 264 Q-----NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + + I D G SDH + Sbjct: 392 PTRPEHSDLEQVRAARATVIGNKLRDRTPSGLWPSDHAGVVAALT 436 >gi|332971475|gb|EGK10427.1| endonuclease/exonuclease/phosphatase [Psychrobacter sp. 1501(2011)] Length = 342 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 43/317 (13%), Positives = 87/317 (27%), Gaps = 47/317 (14%) Query: 26 LVSWNINTLSEQEGVSLW---KNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + + N+ + + + T L + KN +DI QE+ A+ Sbjct: 16 IATSNLLNFALPNRSYYANMQPYTDHQYQKKLTGLYELLKNAKSDIYAFQEVWDEKALQD 75 Query: 83 VF----PKNTWCIFYSTERLINHSKRDSNNDIHT-AIAVRKKNVRVLQQSYPLLG----- 132 + + + + + + T A+ + K+ + Q Sbjct: 76 LAVKLGFEPSQVLAPVASNDPSSALTAGRGAQDTPALGIISKHKVLEWQLLTDFSDLAVI 135 Query: 133 --AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF----------------LDSLE 174 + NR + +E+ G+ I V+ HLKS Sbjct: 136 DIPDVGLYKRFNRPPLVATIEVYGQPITVITAHLKSKRPHYLRDEQGNRLEDYDDPLLRV 195 Query: 175 NTYSPSCSLLSQQAQWLKDW-ITQKKESLVPFVIAGDFNRKIN----------YLGNNDD 223 S + + +A L+ + I + P ++ GD N + D Sbjct: 196 RAKLRSLCMRAAEAAALRLFMIDILHNTRHPLILLGDMNDVTDSVTTQLLAETSEVIYDK 255 Query: 224 FWK--TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY---KFLIQESFSEI 278 + + + + ID + + KF + E Sbjct: 256 AMRDVALFDAARVQTSYGWMRDVAYTHLYQGMPEVIDQLFVSEEFLVDGKFSLGEVERVD 315 Query: 279 LYNEDDIKSRGKRLSDH 295 +N+ R SDH Sbjct: 316 YFNDHLKHDYEDRYSDH 332 >gi|239611388|gb|EEQ88375.1| endonuclease/exonuclease/phosphatase [Ajellomyces dermatitidis ER-3] Length = 330 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 85/303 (28%), Gaps = 28/303 (9%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +RL+S+NI + G K +R + T + D V +QE+ Sbjct: 36 PFPNKSLSLRLMSFNIRYGANPSGN--EKAWSERRGNLITQVAYEMGANDNVFVGMQEVL 93 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSN--NDIHTAIAVRKKNVRVLQQSYPL--- 130 V N + RD ++ I RK ++ Sbjct: 94 HNQLEDVVNGLNNHPSSGGKDWTYIGVGRDDGKQRGEYSPILYRKSLWEPIETDTKWLSE 153 Query: 131 -LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 A NRR V + V + + ++ + + ++ Sbjct: 154 TPDVPSYGWGATNRRIVTIGVFRHKRTRALVLVMNTHL---------DHQVSAARLHGSE 204 Query: 190 WLKDWITQKKESLVP------FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + I K+ ++ GDFN + I + + K Sbjct: 205 LILKLIGDYKKKREYTCRITGVMLTGDFNSEEGQEAYQVVTESKIMVDPAKTLGDKHIYG 264 Query: 244 RCNANKNLRN---KIPIDYFVM-DQNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPI 298 + +DY + D N ++ + ++ Y + SDH + Sbjct: 265 HRKTFTGFNSEVGLSRLDYVFVGDGNLCRWGDKGTWGVNRYAVLPNKFDDDVFFSDHRAV 324 Query: 299 SID 301 D Sbjct: 325 VAD 327 >gi|325922580|ref|ZP_08184334.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865] gi|325546930|gb|EGD18030.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865] Length = 255 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 43/295 (14%), Positives = 89/295 (30%), Gaps = 60/295 (20%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVF 70 AS ++ +R+++ NI S S + + + + A DIV Sbjct: 3 ASDSRTLRVLTANIQAGSSTRRYSDYVTRSWSHALPLGSKRTSLDSIAKLAGER--DIVG 60 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYP 129 LQE + + + + + +H R +A + K + Q + Sbjct: 61 LQEADPGSLRSGFTNQTHYLAERAGFDYWSHQPNRRMGGVASSANGLLSKLQPLEVQDHA 120 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 L G R G R + + V HL + Q Sbjct: 121 LPG------RIGGRGILLAKFGEGRDGLAVAVAHLSLG-------------ANSRMAQLA 161 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC--NA 247 ++ + +++ + ++ GDFN + L R + + C + Sbjct: 162 FIAELLSEHPNA----MLMGDFNCMADRPEMQA-----------LYRHTRLQPPSCEVHT 206 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + R ID+ ++ + + I++ SDH + +D Sbjct: 207 FPSWRPDRAIDHILVSDSL--------------TIERIEAIPAAFSDHLAVGMDI 247 >gi|288574157|ref|ZP_06392514.1| Endonuclease/exonuclease/phosphatase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569898|gb|EFC91455.1| Endonuclease/exonuclease/phosphatase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 242 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 38/285 (13%), Positives = 81/285 (28%), Gaps = 51/285 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWK----NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +RL+ +N+ + + +R+T + + Y NL DI+ L E+ + Sbjct: 1 MRLILYNVRYGTGTGLSYHVPAPFSGNFRRSTGRFKRITDYLMNLSPDIIGLVEVDGGSY 60 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-GAKDSFS 138 N ++ +H ++ + + V + + P + Sbjct: 61 RH---GGNCQAETAASSMGGHHRFAVKYSERISRLPVLRSQGNAIVSRLPPIKTDCHDLG 117 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R R A+E+ ++ +HL Q + L+D Sbjct: 118 RGMKRNALEV----AYGDFSLILVHLSLGS-------------RSRRHQIRALRDL---C 157 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 P ++AGD+N + R + +D Sbjct: 158 SARERPLILAGDYNTLSGPEE-----LAPLRETGMASVNELGLP----TYPCRRPRKELD 208 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ++ + + R SDH P+ D + Sbjct: 209 FVLISEEI--------------STKGFFIPDVRFSDHLPLICDLE 239 >gi|71660781|ref|XP_822104.1| MP99 [Trypanosoma cruzi strain CL Brener] gi|49096010|gb|AAR10848.2| MP99 [Trypanosoma cruzi] gi|70887497|gb|EAO00253.1| MP99, putative [Trypanosoma cruzi] Length = 914 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 95/314 (30%), Gaps = 41/314 (13%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLW---KNSVKRTTSDYTLLRQYAKNLDADIV 69 ++P +R+++WN+ + G T + Y L + + LDAD++ Sbjct: 615 VLPTPTEELSTLRVLTWNVQ-FNRHSGERTPLGRDGIDWCTPTRYIALAKTMETLDADVI 673 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 +QE+ WC + ++ + S N+ A+R V +L + + Sbjct: 674 SMQEVE-----------PAWCKYLCEQQWVRERYALSCNEDSH--AIRPWGVMLLVKRHL 720 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + + A + + I V + L L + S + Q + Sbjct: 721 RVEGMHHANVAAFAGHTSV---MPEVTITVSKNVPVTIGSLHLLAPYNKNNVSNRTTQLE 777 Query: 190 WLKDWITQKKESLVPF---VIAGDFNRKINYLGN------NDDFWKTIDPNDSL---IRF 237 L + + + ++ GDFN N D W ++P ++ Sbjct: 778 NLTKRMRARPSAGGVSTGAIVMGDFNDYANNYFTFPPELGFKDAWSLLNPENNKNEGYTI 837 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE---------DDIKSR 288 +++ D + + + E D Sbjct: 838 DGDRNPYAGQIIEREFFGRADRVLFASRHLQPIHAELVGTTSVRALGITKQVNCDKAVPE 897 Query: 289 GKRLSDHCPISIDY 302 SDH + +++ Sbjct: 898 YLYPSDHFGLLVEF 911 >gi|71018595|ref|XP_759528.1| hypothetical protein UM03381.1 [Ustilago maydis 521] gi|46099016|gb|EAK84249.1| hypothetical protein UM03381.1 [Ustilago maydis 521] Length = 300 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 30/304 (9%), Positives = 80/304 (26%), Gaps = 38/304 (12%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 V + + V+ N+ L + + ++ ++ D D++ +QE Sbjct: 19 VSTAPTSMGSLTAVTMNVAGLPAFINGNGAADKK----ANSIMIGNKFAQYDYDLINVQE 74 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYPLLG 132 + + + + S + + Sbjct: 75 DFN------------YHAYIYDNDDHPYRTPTSGGVPFGSGLNTLSTIPFKDLSRVKWEK 122 Query: 133 AK-DSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + + + V + G ++ + ++H+ + S + A Sbjct: 123 CNLNEGDCLTPKGYTVVTVTLPTGGELDLYNLHMDAGSDDGDSSARTSNFEQVARAIA-- 180 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNND----------DFWKTIDPNDSLIRFPKE 240 ++ + ++ GD N + +N D W + Sbjct: 181 -----SRSDAAGRAVIVMGDTNSRYTRPKDNLLSFLSKTGLVDTWVELVRGGKPPASTDA 235 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + N +D + L ++ + + G L+DH PIS+ Sbjct: 236 ALLCADPIPTSNNCEVVDKVFYKNGSKVTLKPSTWQ--YLATEFTDATGNPLADHTPISV 293 Query: 301 DYDF 304 + + Sbjct: 294 QFTY 297 >gi|261205322|ref|XP_002627398.1| endonuclease/exonuclease/phosphatase [Ajellomyces dermatitidis SLH14081] gi|239592457|gb|EEQ75038.1| endonuclease/exonuclease/phosphatase [Ajellomyces dermatitidis SLH14081] Length = 330 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 85/303 (28%), Gaps = 28/303 (9%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +RL+S+NI + G K +R + T + D V +QE+ Sbjct: 36 PFPNKSLSLRLMSFNIRYGANPSGN--EKAWSERRGNLITQVAYEMGANDNVFVGMQEVL 93 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSN--NDIHTAIAVRKKNVRVLQQSYPL--- 130 V N + RD ++ I RK ++ Sbjct: 94 HNQLEDVVNGLNNHPSSGGKDWTYIGVGRDDGKQRGEYSPILYRKSLWEPIETDTKWLSE 153 Query: 131 -LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 A +RR V + V + + ++ + + ++ Sbjct: 154 TPDVPSYGWGATSRRIVTIGVFRHKRTRALVLVMNTHL---------DHQVSAARLHGSE 204 Query: 190 WLKDWITQKKESLVP------FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + I K+ ++ GDFN + I + + K Sbjct: 205 LILKLIGDYKKKREYTCRITGVMLTGDFNSEEGQEAYQVVTESKIMVDPAKTLGDKHIYG 264 Query: 244 RCNANKNLRN---KIPIDYFVM-DQNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPI 298 + +DY + D N ++ + ++ Y + SDH + Sbjct: 265 HRKTFTGFNSEVGLSRLDYVFVGDGNLCRWGDKGTWGVNRYAVLPNKFDDDVFFSDHRAV 324 Query: 299 SID 301 D Sbjct: 325 VAD 327 >gi|255578467|ref|XP_002530098.1| ap endonuclease, putative [Ricinus communis] gi|223530409|gb|EEF32297.1| ap endonuclease, putative [Ricinus communis] Length = 486 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 37/314 (11%), Positives = 86/314 (27%), Gaps = 84/314 (26%) Query: 17 TASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +A+ V+L+SWN+N L + + + A+ + D++ QE Sbjct: 227 PPPLAEDTKFVKLMSWNVNGLRALLKLEGFSA------------VELAQRENFDVLCFQE 274 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + T ++ A+ + + + Sbjct: 275 TK--------LQAKGYENSFWTCSHSKLG--------YSGTAIVSRVKPLSVSYGLGIAD 318 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW-LK 192 DS R V ++L+ ++ + S Q L Sbjct: 319 HDSEGRL---------VTAEFDSFYLLNAYVPN-------SGDGLKRLSYRVSQWDLSLS 362 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRF 237 +++ + ++S P ++ GD N + + + + Sbjct: 363 NYMKELEKSK-PVILNGDLNCAHQEIDIYNPAGNRRNAGFTDEERQSFETNFLSRGFVDS 421 Query: 238 PKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 +++ + +DYF++ ++ + D Sbjct: 422 FRKQHPDVVGYTYWGYRHGGRKTNKGWRLDYFLVSESISDQVH-----------DSYIVP 470 Query: 289 GKRLSDHCPISIDY 302 SDHCPI + Sbjct: 471 DVTGSDHCPIGLVL 484 >gi|134045625|ref|YP_001097111.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C5] gi|132663250|gb|ABO34896.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C5] Length = 249 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 80/303 (26%), Gaps = 77/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++SWN+N + + K D++ +QE + Sbjct: 1 MKMLSWNVNGIRACLKNGFM---------------DFLKRESPDVMCIQETKVQSG-QVQ 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ +S I + G K+S R Sbjct: 45 LGLDGYFQYWNYAERKGYSGTAVFTKIKPNEVI--------------YGIKNSEHNGEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++++++ + + + L+ + Sbjct: 91 -----VITLKFDEYYLVNVYTPNSQRGLTRLKYRQKWDQDFLNYVKTLE--------NKK 137 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P + GD N F ++ K+ + Sbjct: 138 PVIFCGDLNVAHKEIDLKNPKTNVKNAGFTPEERKGFDNIVNSGFLDTFREFNKEPDNYS 197 Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + R IDYF + ++ L D SDHCP+ I Sbjct: 198 WWSYRFNARARNIGWRIDYFCISESLRNNLK-----------DAFIMSEIMGSDHCPVGI 246 Query: 301 DYD 303 +D Sbjct: 247 IFD 249 >gi|327306001|ref|XP_003237692.1| DNA lyase [Trichophyton rubrum CBS 118892] gi|326460690|gb|EGD86143.1| DNA lyase [Trichophyton rubrum CBS 118892] Length = 603 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 40/340 (11%), Positives = 83/340 (24%), Gaps = 79/340 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +RL +WN+N + W+ + L+ADIV QE + + Sbjct: 3 LRLTTWNVNGIRNPFSYEPWRGN--------RTFGTMFDILEADIVVFQEAKIQRKDLQD 54 Query: 82 KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVR-------------KKNVRVLQQS 127 + + W ++S + +S A+R K + Sbjct: 55 DMVLVSGWDCYFSLPRQKKGYSGVVIYTRSSKCSAIRAEEGVTGALCPPSSKTPFRQLSA 114 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 +G S + V+ ++ + + +L+ + + Sbjct: 115 SEQIGGYPSIEQMEELSEVDPIIVDSEGRCLILEFPAFVLIGVYCPADRDETRDDFRLGF 174 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNR---KINYLG------------------NNDDFWK 226 L+ + + ++AGD N I+ + Sbjct: 175 FNLLEVRVRNLVKMGKRVILAGDLNTCAGPIDSAPALERIRKGTETEEEYLSYPARLIFN 234 Query: 227 TIDPNDSLIRFPKEK--------------DSRCNANKNLR---------NKIPIDYFVMD 263 + + R IDY + Sbjct: 235 RLVRPVGSTADTHDTETPPVLRDLCREFHPGRTGMYTCWNQKVNARPGNYGSRIDYILCS 294 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 N + ++ + G SDHCP+ Sbjct: 295 DNIRSWFVESNIQ-----------EGLMGSDHCPVYASIS 323 >gi|322709123|gb|EFZ00699.1| Endonuclease/Exonuclease/phosphatase family protein [Metarhizium anisopliae ARSEF 23] Length = 320 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 45/293 (15%), Positives = 78/293 (26%), Gaps = 26/293 (8%) Query: 20 VAQKVRLVSWNINTL-SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 VRLVS+NI +E E + R + +R ++ V LQE S Sbjct: 40 ATMPVRLVSFNIRYAANEDERSLAEQPWNVRCPKVCSQMRFITAGHESPFVCLQESLSSQ 99 Query: 79 AVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + I + + + R L Sbjct: 100 L------NDIQAELGEPWAHIGRGRGEGEADGEFSPVFYRSDAWACEVSETRWLSKTPEK 153 Query: 138 SRAGNRRAV--ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 G A+ + + + + + + S F S LL + A +W Sbjct: 154 PSRGWDAALNRIVTIGLFSHRANGTKVVVMSTHFDHIGVEARKNSAKLLIKFA---NEWS 210 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN----- 250 K +I GDFN + + +D P+ + + Sbjct: 211 HGKGVPPSVVLIGGDFNSETDDEAYRMMTAPGSGMSDISDLVPERRHYGNHLTYTSFGEP 270 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPISIDY 302 + ID+ + + + + R SDH PI D Sbjct: 271 NEHPQRIDFLFI-------QEPRTAHVETFGVLANSFDDQIRFSDHRPIVSDL 316 >gi|45361461|ref|NP_989307.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Xenopus (Silurana) tropicalis] gi|39794455|gb|AAH64266.1| hypothetical protein MGC76280 [Xenopus (Silurana) tropicalis] gi|51703687|gb|AAH80950.1| hypothetical protein MGC76280 [Xenopus (Silurana) tropicalis] gi|89267865|emb|CAJ83004.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Xenopus (Silurana) tropicalis] Length = 316 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 36/302 (11%), Positives = 81/302 (26%), Gaps = 73/302 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++ SWN+ +G+ W + + D I+ LQE+ + Sbjct: 60 TLKISSWNV------DGIRAWIKKQG---------LNWVREEDPHIMCLQEIKCAEKLLP 104 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 K+ + + + S +A+ K+ + + D R Sbjct: 105 PEIKDMPEYPHKYWACPDEKEGYS------GVAMLCKDKPLNVTYGIGIEEHDKEGR--- 155 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 ++ +++ ++ + + + L +S Sbjct: 156 ------VITAEFDSFFLIAAYVPNSSRGLVRLDYRQRWDVDFRAYLKGL--------DSK 201 Query: 203 VPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N + + + L F + + +A Sbjct: 202 KPLILCGDLNVAHQEIDLKNPKTNKKTPGFTPQERQGFGELLAEGYLDSFRELYPDKPSA 261 Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +DYFV+ + L + SDHCPI Sbjct: 262 YTFWTYMMNARAKNVGWRLDYFVLSKALRPALCDSKVRSKI-----------MGSDHCPI 310 Query: 299 SI 300 ++ Sbjct: 311 TL 312 >gi|68472623|ref|XP_719630.1| potential Endonuclease/Exonuclease/Phosphatase [Candida albicans SC5314] gi|68472882|ref|XP_719506.1| potential Endonuclease/Exonuclease/Phosphatase [Candida albicans SC5314] gi|46441327|gb|EAL00625.1| potential Endonuclease/Exonuclease/Phosphatase [Candida albicans SC5314] gi|46441456|gb|EAL00753.1| potential Endonuclease/Exonuclease/Phosphatase [Candida albicans SC5314] gi|238881882|gb|EEQ45520.1| conserved hypothetical protein [Candida albicans WO-1] Length = 303 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 93/311 (29%), Gaps = 19/311 (6%) Query: 1 MIRKYVLALV---FFLVPCT-ASVAQKVRLVSWNINTLSEQEGVSLWK-NSVKRTTSDYT 55 M+ + V ++ ++ + + A + + S N+ + + G + R Sbjct: 1 MLSRVVFIILHWTLLVLADSRTTSALDITIYSNNVRYAASRRGRGRDELPWKIRKHGVVD 60 Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND--IHTA 113 ++ +D ++ LQE+ + N RD+ + ++ Sbjct: 61 AIKSQ-SGVDPILIGLQEVTHAQLKDILKGLNKKNSEDDRRWTFFGVGRDNGHKKGEYSP 119 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 I +L +Y L A + + G V + +F Sbjct: 120 ILYNTAEWNLLNGTYKWLSFTPDKPSKYP-GASKKRIVTMGTFSHVKTGKVVNFVNTHLD 178 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 S A+ + +I + P + GDFN ++ F + Sbjct: 179 H----RSVKSREYSAKLIIQYIKS-IPNYFPTFLCGDFN-SLDTDKAYATFSHYMVDASH 232 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE-DDIKSRGKRL 292 + + + + + ID+ + + + Y D++ G R Sbjct: 233 VAEKKYDTNLKTFSGFGNGTSYSIDFIW---SPMDTNDNSGTNALSYTVLDNLFDEGHRF 289 Query: 293 SDHCPISIDYD 303 SDH P+ Y Sbjct: 290 SDHRPVMARYS 300 >gi|299147224|ref|ZP_07040289.1| endonuclease/Exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] gi|298514502|gb|EFI38386.1| endonuclease/Exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] Length = 341 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 39/343 (11%), Positives = 91/343 (26%), Gaps = 59/343 (17%) Query: 2 IRKYVLALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKN----------- 45 ++K ++ L + + Q+ + +N+ L + + Sbjct: 1 MKKSLMTLGVLALFVLMAYGQEKKFALYSVAFYNMENLFDTIHDEGKNDYEYLPNGTNQW 60 Query: 46 SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + + + + + L D I+ + E+ +Y + + + Sbjct: 61 NTMKYKAKLKNMSEILSLLSTDKLPMGPAIIGVSEIENYRVLEDILKQP---ALADRGYQ 117 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 H + + + A K + + + + R + I +K+ Sbjct: 118 YVHYEGEDQRGVDCAFFYNPKLFELTNSKL-VPYVYINDTVHKTRGFLIASGNIADEKMH 176 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 + H S SP+ +Q + +KD + +++S VI GD N Sbjct: 177 FIVNHWPSR-------AAASPARERAGEQVRAIKDSL-LREDSAAKIVIMGDMNDDPMDK 228 Query: 219 GNNDDFWKTID-----PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLI 271 P D + D V N Sbjct: 229 SMAVALGAKRKPVDAGPTDLYNPWWDTLKKGYGTLMYKGKWNLFDQIVFTGNLLGTDRST 288 Query: 272 QESFSEILYNEDDIKSRGKR-----------------LSDHCP 297 + + +++ D + + + SDH P Sbjct: 289 LKFYKHEIFSRDFMFQKEGKYKGYPKRTQAGGVWLNGYSDHLP 331 >gi|118445216|ref|YP_891186.1| hypothetical protein BALH_p0037 [Bacillus thuringiensis str. Al Hakam] gi|118419777|gb|ABK88195.1| conserved hypothetical protein [Bacillus thuringiensis str. Al Hakam] Length = 344 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 42/352 (11%), Positives = 96/352 (27%), Gaps = 72/352 (20%) Query: 3 RKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTS------- 52 +K L P + + + + +++WN+ ++ + L + + Sbjct: 9 KKCCRRLFPAFPPAVSPIPEPQGPLTIMTWNLYLGADFTPLVLATTQAELRQAVTEVFRQ 68 Query: 53 --------DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW--------------- 89 + + DI+ LQE + T+ Sbjct: 69 FLATNFPIRVETIARQIVLKKPDIIGLQEAELWQLFVPGLQTVTYDFVKLLLSELKKMGL 128 Query: 90 CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG-------- 141 + N + S+ R + + + ++ +++ A Sbjct: 129 HYEVAALNENNSVQLPSSTGNIVGFLDRDVILIRKESGFKVIQKQEANFEAKLTILVGGQ 188 Query: 142 ----NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R + V NG+ V++ HL+ Q + +T Sbjct: 189 PFTIPRGWSSIDVSANGRIFRVINTHLEPLSPP---------------VQVAQGNELLTG 233 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-------ANKN 250 + +P ++ GD N N G + I+ + + N Sbjct: 234 PANTNLPLILLGDLNSNANGTGT-PTYGNFINAGFQDVWIEVGEGQGFTCCQDSDLLNAA 292 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ + +N + ++ + E + D S SDH + Sbjct: 293 SSLNRRIDFILF-KNGWNPIVADLVGE---EQQDRTSTALWPSDHAGVVASL 340 >gi|327348603|gb|EGE77460.1| endonuclease/exonuclease/phosphatase [Ajellomyces dermatitidis ATCC 18188] Length = 330 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 85/303 (28%), Gaps = 28/303 (9%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +RL+S+NI + G K +R + T + D V +QE+ Sbjct: 36 PFPNKSLSLRLMSFNIRYGANPSGN--EKAWSERRGNLITQVAYEMGANDNVFVGMQEVL 93 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSN--NDIHTAIAVRKKNVRVLQQSYPL--- 130 V N + RD ++ I RK ++ Sbjct: 94 HNQLEDVVNGLNNHPSSGGKDWTYIGVGRDDGKQRGEYSPILYRKSLWEPIETDTKWLSE 153 Query: 131 -LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 A NRR V + V + + ++ + + ++ Sbjct: 154 TPDVPSYGWGATNRRIVTIGVFRHKRTRALVLVMNTHL---------DHQVSAARLHGSE 204 Query: 190 WLKDWITQKKESLVP------FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + I K+ ++ GDFN + I + + K Sbjct: 205 LILKLIGDYKKKREYTCRITGVMLTGDFNSEEGQEAYQVVTESKIMVDPAKTLEDKHIYG 264 Query: 244 RCNANKNLRN---KIPIDYFVM-DQNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPI 298 + +DY + D N ++ + ++ Y + SDH + Sbjct: 265 HRKTFTGFNSEVGLSRLDYVFVGDGNLCRWGDKGTWGVNRYAVLPNKFDDDVFFSDHRAV 324 Query: 299 SID 301 D Sbjct: 325 VAD 327 >gi|320536290|ref|ZP_08036333.1| exodeoxyribonuclease III [Treponema phagedenis F0421] gi|320146850|gb|EFW38423.1| exodeoxyribonuclease III [Treponema phagedenis F0421] Length = 258 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 34/310 (10%), Positives = 81/310 (26%), Gaps = 84/310 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY------ 77 + ++SWN+N + E + N DI+ LQE+ + Sbjct: 2 LNIISWNVNGIRAVEKKGF---------------ADWLYNESPDILCLQEIKARKEQVSG 46 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +A V+ T+ F+ + +S + Sbjct: 47 ELLAPVWEGGTYKTFWQPAKRPGYSGTALFTKKEPDNIRIMDLEEFDSEGR--------- 97 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 ++ + K+ V+ + + + C ++++ Sbjct: 98 -----------VIAADFGKLTVISAYFPNSQDAGARLAYKLEFC-------AAMREFCDN 139 Query: 198 KKESLVPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ ++ GD+N YL ++ + F Sbjct: 140 LQKEGQDVILCGDYNIAHKPIDLANPKTNEKNPGYLPEEREWMDVFTGAGYVDTFRHFCA 199 Query: 243 SRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + IDY ++++ + + ++ S Sbjct: 200 EPEH-YTWWTYRFKARERNVGWRIDYHCVNEDFLPKVKSSIILKDVF-----------GS 247 Query: 294 DHCPISIDYD 303 DHCPI + Sbjct: 248 DHCPIKLSVS 257 >gi|296135801|ref|YP_003643043.1| exodeoxyribonuclease III Xth [Thiomonas intermedia K12] gi|295795923|gb|ADG30713.1| exodeoxyribonuclease III Xth [Thiomonas intermedia K12] Length = 267 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 83/305 (27%), Gaps = 68/305 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+ + N+N + + + D++ +QE+ K Sbjct: 5 PLRVTTLNLNGIRSAANKGVDDWLRSQAR--------------PDVLCVQEL-------K 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + L + + + ++ + + K+ + +G + A Sbjct: 44 ALEADMTPGLRTLGGLHGAAFQHAEKPGYSGVGLYWKHEPDDVR----IGFGHAEFDAEG 99 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + G ++ ++ + S + + + + L ++ Sbjct: 100 RYVEAIYKRPGGGRLSIVSAYFPSGSSSEERQQAKFRFLADFYEHLLAL--------KAA 151 Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD N + ID + F + + + Sbjct: 152 GEVLLCGDVNIAHKEIDLKNWKGNLKNSGFLPEERAWMTRLIDEAGYVDVFRQLDPAP-D 210 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + +S +R SDH P Sbjct: 211 RYTWWSNRGQARAKNVGWRIDYHLATPGIAAQAKSDSAWIYT---------EQRFSDHAP 261 Query: 298 ISIDY 302 ++IDY Sbjct: 262 LTIDY 266 >gi|322391715|ref|ZP_08065182.1| RgfB protein [Streptococcus peroris ATCC 700780] gi|321145425|gb|EFX40819.1| RgfB protein [Streptococcus peroris ATCC 700780] Length = 272 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 38/281 (13%), Positives = 77/281 (27%), Gaps = 54/281 (19%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95 + LL Q + D++ QE+ ++V + S Sbjct: 17 EEKFQLLLQDIFENNYDLICFQEINQEITSSQVDAGPFYFPLPSAEPIHQDHYVRLLVEQ 76 Query: 96 -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148 + H +A+ K ++ L+ D + RR Sbjct: 77 LAEKGLKYYWTWAYNHIGYDRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVALA 134 Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208 + GK++ V +HL + E + + L P ++A Sbjct: 135 ETVVEGKELAVASVHLSWWGKGFQEEWARFEAV------LKELNK----------PLLLA 178 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-----NKNLRNKIPIDYFVMD 263 GDFN G ++ D+ + + S K + IDY Sbjct: 179 GDFNNPAGQEGYQAILASPLELQDAFEVAKERRGSYTVPPEIDGWKGNSEPLRIDYVFTT 238 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ + + ++SDH + + + Sbjct: 239 KD---------IQIESLHVVFDGKQNPQVSDHYGLQAELSW 270 >gi|255721545|ref|XP_002545707.1| hypothetical protein CTRG_00488 [Candida tropicalis MYA-3404] gi|240136196|gb|EER35749.1| hypothetical protein CTRG_00488 [Candida tropicalis MYA-3404] Length = 350 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 44/335 (13%), Positives = 93/335 (27%), Gaps = 49/335 (14%) Query: 3 RKYVLAL----VFFLVPCTASVAQK-----------VRLVSWNINTLSEQEGVSLWKNSV 47 RK LA+ +F + + Q +R+ + NI ++ + Sbjct: 25 RKLFLAIIFPVLFLALIIVTILIQSSKMDLDATPLLLRIYTNNIRFDNKGHPDKYEQPWE 84 Query: 48 KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107 R ++ + A+I+ LQE+ + + +S + + S Sbjct: 85 IRKIQSVNSMQFHTTQGHANIICLQEVLHNQ-LQDILNGLNEFEEWSYFGVGRTDGKTSG 143 Query: 108 NDIHTAIAV-RKKNVRVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDI 162 + I + + + +++ L D + A R + + ++ Sbjct: 144 --EYAPILYKKSEFDILDSKTFWLSPTPDKPSKGWDAALERIVTVVTFQSKSSPSIRFNV 201 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 + S A LK++ + P +AGD N + ++ Sbjct: 202 FNTHY--DHRGVVARRESS---LFIADKLKNY------NEYPSFLAGDLNTEPTDEPHSI 250 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLR---NKIPIDYFVMDQNAYKFLIQE------ 273 + LI + + IDY + F + Sbjct: 251 LESSGFKDSFKLIGKKYSYGYNTSFTGFDKDNEPVSRIDYIW-SPSYTTFDVGHESSKDE 309 Query: 274 -----SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 S + G SDH P+ Y+ Sbjct: 310 ASNRFGVSLKSFGIVSNWFNGNFFSDHRPVVATYE 344 >gi|206895175|ref|YP_002247534.1| exodeoxyribonuclease III [Coprothermobacter proteolyticus DSM 5265] gi|206737792|gb|ACI16870.1| exodeoxyribonuclease III [Coprothermobacter proteolyticus DSM 5265] Length = 250 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 29/301 (9%), Positives = 80/301 (26%), Gaps = 78/301 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N + + + + D++ LQE+ N + Sbjct: 1 MKVATFNVNG----------------IRARLDSISELMQMEAPDVLCLQEIKCENDL--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ + + +++ + V + ++ Sbjct: 42 ---------FPYDFFKDYQCYVNGQKAYNGVSICSRKEGVPVVVLEEVESR--------- 83 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +++++ + SP Q + + + Sbjct: 84 -----TLGLVLGDTLIVNVYAPHG------DLRGSPRFFQKIQWYKAFSKRMEELLRRYP 132 Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GDFN + + K + + F + Sbjct: 133 KVLIVGDFNIALKDNDVWDPILLKDTVGTFPEEREALKALLSVGFVDVF-RAIYPEKVQF 191 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDY + S ++ E+ K R + SDH P+ Sbjct: 192 TWWDYRQGRMWKNQGMRIDYVFSSETLMP-----SIEDVYVVEEIRKRRNPKPSDHAPVV 246 Query: 300 I 300 Sbjct: 247 C 247 >gi|154491892|ref|ZP_02031518.1| hypothetical protein PARMER_01519 [Parabacteroides merdae ATCC 43184] gi|154088133|gb|EDN87178.1| hypothetical protein PARMER_01519 [Parabacteroides merdae ATCC 43184] Length = 373 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 82/305 (26%), Gaps = 64/305 (20%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 ++++++N+ + N + +Y N ADIV LQE Sbjct: 102 PKENVLKVLTYNVMGFGYKGHTEDAPNP----------IIRYIANSGADIVCLQEYAVGT 151 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + + S IAV K + + + S Sbjct: 152 SKNFLTNQKIANALKMYRYRSIIPIGTSGTLKFN-IAVFSKYPISKSRKIKYDSSFNGSS 210 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-------------------- 178 ++I GKK+ +++ HL+SF + YS Sbjct: 211 IHE--------LDIRGKKLTLINNHLESFKLTMEDRSHYSAFIKNLNSETLDGLRSSIEQ 262 Query: 179 ---PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 P+ + ++QA+ + + I + ++ GDFN + Sbjct: 263 KLGPAFRIRARQARAVAEEIKKI--DTDYVLVCGDFNDTPISYAHRTI------QGPLKD 314 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + ID + N + R SDH Sbjct: 315 AYAASGRGVGVTYNENFFWFRIDNILHSANMKP--------------INCTVDKVRYSDH 360 Query: 296 CPISI 300 P+ Sbjct: 361 YPLWC 365 >gi|118591884|ref|ZP_01549279.1| Endonuclease/exonuclease/phosphatase family protein [Stappia aggregata IAM 12614] gi|118435527|gb|EAV42173.1| Endonuclease/exonuclease/phosphatase family protein [Stappia aggregata IAM 12614] Length = 351 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 33/290 (11%), Positives = 82/290 (28%), Gaps = 40/290 (13%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + A + +++VS N+ L + V L+ + + D+V QE Sbjct: 95 LGPAAPGDRPLKVVSINLEHLFLGDKV----------------LQAFLEKEQPDVVVFQE 138 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP-LLG 132 + + + + + R + A+ R + + Sbjct: 139 V--LWWLQERRWQRLGLPVGGAGKNGFPDYRKVGDLGGLAVYSRFPLSEEETRVISGDVP 196 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + + G+R + L ++ + +L IH + +A + Sbjct: 197 SGANVYYDGDRELLSLSLDTGAAPLHLLVIH-----PDSPRSEIRWENKRRYFDEADAVI 251 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 D + + + GD+N + +P+ + + + Sbjct: 252 DTLK--AGNGSNILAIGDWNSSPWSARFQQTLERNGLKTAYPDGWPQTTRFFFDYSLHWI 309 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 P+D F + ++ + SDH P+ ++ Sbjct: 310 LGAPVDQFAVSRDIQIVNVSLGPDI--------------GSDHLPLIVEI 345 >gi|24649585|ref|NP_732967.1| twin, isoform B [Drosophila melanogaster] gi|23172143|gb|AAF56256.2| twin, isoform B [Drosophila melanogaster] gi|25009859|gb|AAN71099.1| AT23187p [Drosophila melanogaster] gi|220951022|gb|ACL88054.1| twin-PB [synthetic construct] gi|220957942|gb|ACL91514.1| twin-PB [synthetic construct] Length = 545 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 40/343 (11%), Positives = 94/343 (27%), Gaps = 63/343 (18%) Query: 24 VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++ +N+ + + ++ + + ++ ADI+ LQE+ + Sbjct: 185 FTVMCYNVLCDKYATRQMYGYCPSWALCWEYRKKSIIDEIRHYAADIISLQEIETEQFYH 244 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLL------ 131 P+ + + +K S + AI R ++++S Sbjct: 245 FFLPELKNDGYEGIFSPKSRAKTMSELERKYVDGCAIFFRASKFTLIKESLIEFNQLAMA 304 Query: 132 ---GAKDSFSRAGNR-----RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 G+ + +R + A+ + E + + + + + + C + Sbjct: 305 NAEGSDNMLNRVMPKDNIGLAALLKVKENAWEPMSEVTQISQPLLVCTAHIHWDPEFCDV 364 Query: 184 LSQQAQWLKDWITQKKESLVP--------------FVIAGDFNRKINYLGN--------- 220 Q L + + + ++ GDFN + Sbjct: 365 KLIQTMMLSNELKTIIDEASHSFRPGHKNDSNAVQLLLCGDFNSLPDSGVVEFLGKGRVS 424 Query: 221 ----------NDDFWKTIDPNDSLIRFPKEKDSRCN-------ANKNLRNKIPIDYFVMD 263 + + ND+ K + N K IDY Sbjct: 425 MDHLDFKDMGYKSCLQRLLSNDTNEFTHSFKLASAYNEDIMPHTNYTFDFKGIIDYIFYT 484 Query: 264 QNAYK---FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + L S + N+ SDH P+ ++ + Sbjct: 485 KTGMVPLGLLGPVSNDWLRENKVVGCPHPHIPSDHFPLLVELE 527 >gi|24649579|ref|NP_732964.1| twin, isoform C [Drosophila melanogaster] gi|23172140|gb|AAN13986.1| twin, isoform C [Drosophila melanogaster] gi|33589482|gb|AAQ22508.1| LD39302p [Drosophila melanogaster] gi|220950318|gb|ACL87702.1| twin-PA [synthetic construct] Length = 567 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 40/343 (11%), Positives = 94/343 (27%), Gaps = 63/343 (18%) Query: 24 VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++ +N+ + + ++ + + ++ ADI+ LQE+ + Sbjct: 207 FTVMCYNVLCDKYATRQMYGYCPSWALCWEYRKKSIIDEIRHYAADIISLQEIETEQFYH 266 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLL------ 131 P+ + + +K S + AI R ++++S Sbjct: 267 FFLPELKNDGYEGIFSPKSRAKTMSELERKYVDGCAIFFRASKFTLIKESLIEFNQLAMA 326 Query: 132 ---GAKDSFSRAGNR-----RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 G+ + +R + A+ + E + + + + + + C + Sbjct: 327 NAEGSDNMLNRVMPKDNIGLAALLKVKENAWEPMSEVTQISQPLLVCTAHIHWDPEFCDV 386 Query: 184 LSQQAQWLKDWITQKKESLVP--------------FVIAGDFNRKINYLGN--------- 220 Q L + + + ++ GDFN + Sbjct: 387 KLIQTMMLSNELKTIIDEASHSFRPGHKNDSNAVQLLLCGDFNSLPDSGVVEFLGKGRVS 446 Query: 221 ----------NDDFWKTIDPNDSLIRFPKEKDSRCN-------ANKNLRNKIPIDYFVMD 263 + + ND+ K + N K IDY Sbjct: 447 MDHLDFKDMGYKSCLQRLLSNDTNEFTHSFKLASAYNEDIMPHTNYTFDFKGIIDYIFYT 506 Query: 264 QNAYK---FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + L S + N+ SDH P+ ++ + Sbjct: 507 KTGMVPLGLLGPVSNDWLRENKVVGCPHPHIPSDHFPLLVELE 549 >gi|319790081|ref|YP_004151714.1| exodeoxyribonuclease III Xth [Thermovibrio ammonificans HB-1] gi|317114583|gb|ADU97073.1| exodeoxyribonuclease III Xth [Thermovibrio ammonificans HB-1] Length = 259 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 81/301 (26%), Gaps = 69/301 (22%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 LV+WN+N + + + + + D + LQE ++F Sbjct: 3 SLVTWNVN----------------SVRARLSYISYWLERERWDFLALQE---TKVPDELF 43 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 P+ + + + +A+ K + G D Sbjct: 44 PEGVFKEL-------GYGVVYHGQKAYNGVALCFKGEPLRVLKGWPDGEDDEKR------ 90 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 L+ + + ++++++ S + LK ++ + P Sbjct: 91 ----LITVWLEPFPIVNVYVPRGG------EKGSERHAFKLYFLTKLKLFLQESFSPDEP 140 Query: 205 FVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNANK 249 + GDFN + L D ++ + F + Sbjct: 141 LAVVGDFNVARSELDVYDPAVWRGRPGFMEDERQAFEELLSFGLFDLFRELHPDEPGYTW 200 Query: 250 N--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + IDY ++ + K + E K G SDH P+ Sbjct: 201 WDIETGGFARNRGLRIDYILVTEPLLKRAQECRV----LREARRKLGGLLPSDHAPLVAA 256 Query: 302 Y 302 + Sbjct: 257 F 257 >gi|218264592|ref|ZP_03478387.1| hypothetical protein PRABACTJOHN_04093 [Parabacteroides johnsonii DSM 18315] gi|218221900|gb|EEC94550.1| hypothetical protein PRABACTJOHN_04093 [Parabacteroides johnsonii DSM 18315] Length = 373 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 85/305 (27%), Gaps = 64/305 (20%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 ++++++N+ + N + +Y N ADIV LQE Sbjct: 102 PKENVLKVLTYNVMGFGYKGHTEDSPNP----------IIRYIANSGADIVCLQEYAVGT 151 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + + S IAV K + + + S Sbjct: 152 SKNFLTNQKIANALKMYRYRSIIPIGTSGTLKFN-IAVFSKYPISKSRKIKYESSFNGSS 210 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-------------------- 178 + INGKK+ +++ HL+SF + YS Sbjct: 211 IHE--------LNINGKKLTLINNHLESFKLTMEDRSHYSAFIKNLNSETLDGLRSSIEQ 262 Query: 179 ---PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 P+ + ++QA+ + + I + ++ GDFN + Sbjct: 263 KLGPAFQIRARQARAVAEEIKKI--DTDYILVCGDFNDTPISYAHRTI------QGPLKD 314 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + ID + N I + ++ Y SDH Sbjct: 315 AYAASGRGVGVTYNENFFWFRIDNILHSANMKP--INCTIDKVRY------------SDH 360 Query: 296 CPISI 300 P+ Sbjct: 361 YPMWC 365 >gi|255263312|ref|ZP_05342654.1| exodeoxyribonuclease III [Thalassiobium sp. R2A62] gi|255105647|gb|EET48321.1| exodeoxyribonuclease III [Thalassiobium sp. R2A62] Length = 262 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 35/308 (11%), Positives = 70/308 (22%), Gaps = 75/308 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAV 80 L +WNIN++ +EG+ + + D++ LQE S Sbjct: 2 PFTLATWNINSVRLREGI----------------VCDLLEQEAPDVLCLQECKSPVEKIP 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + F + + +A+ K S G + Sbjct: 46 TERFAALGYSHI-----------VARGQKGYNGVAILSKLPLEDMGSEDFAGLGHARH-- 92 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 V + V+ H L A +D+ + Sbjct: 93 -----VAAKLPNG----VVIHNHYVPAGGDVPDREVNEKFGQKLDYLADMERDF---RAA 140 Query: 201 SLVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRC 245 ++ GD N D + + + + + Sbjct: 141 PPKRAILVGDLNIAPREDDVWDHKKLLKIISHTPVEVEAFNAVMAAGDWVDVTRADIPEG 200 Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ + I Y ++ SDH Sbjct: 201 LLYSWWSYRAKDWDAADKGRRLDHVWATSDIAAS--ASGSRVIRYV-----RGWEKPSDH 253 Query: 296 CPISIDYD 303 P+ +D Sbjct: 254 APVFATFD 261 >gi|19112314|ref|NP_595522.1| AP-endonuclease Apn2 [Schizosaccharomyces pombe 972h-] gi|48427993|sp|P87175|APN2_SCHPO RecName: Full=DNA-(apurinic or apyrimidinic site) lyase 2; AltName: Full=AP endonuclease 2; AltName: Full=Apurinic-apyrimidinic endonuclease 2 gi|2117306|emb|CAB09119.1| AP-endonuclease Apn2 [Schizosaccharomyces pombe] gi|40287246|gb|AAR83752.1| AP-endonuclease-like protein [Schizosaccharomyces pombe] Length = 523 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 36/321 (11%), Positives = 82/321 (25%), Gaps = 61/321 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA---V 80 +R++SWN+N + W + L AD++ +QE+ Sbjct: 1 MRILSWNVNGIQNPFNYFPWNKKNSYKE--------IFQELQADVICVQELKMQKDSFPQ 52 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK------NVRVLQQSYPLLGAK 134 + F + +S AI V+ + Q+ + Sbjct: 53 QYAVVEGFDSYFTFPKIRKGYSGVGFYVKKDVAIPVKAEEGITGILPVRGQKYSYSEAPE 112 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE--NTYSPSCSLLSQQAQWLK 192 + + + + + F + N+ + L+ Sbjct: 113 HEKIGFFPKDIDRKTANWIDSEGRCILLDFQMFILIGVYCPVNSGENRLEYRRAFYKALR 172 Query: 193 DWITQKKESLVP-FVIAGDFN---RKINYLGNNDDFWKTI-------------------- 228 + I + + ++ GD N I+ D +++ Sbjct: 173 ERIERLIKEGNRKIILVGDVNILCNPIDTADQKDIIRESLIPSIMESRQWIRDLLLPSRL 232 Query: 229 ---DPNDSLIRFPKEKDSRCNANKNL----RNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + ++ C + IDY + + ++ + Sbjct: 233 GLLLDIGRIQHPTRKGMFTCWNTRLNTRPTNYGTRIDYTLATPDLLPWVQDADIMAEV-- 290 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 SDHCP+ +D Sbjct: 291 ---------MGSDHCPVYLDL 302 >gi|149193831|ref|ZP_01870929.1| exodeoxyribonuclease III (xthA) [Caminibacter mediatlanticus TB-2] gi|149135784|gb|EDM24262.1| exodeoxyribonuclease III (xthA) [Caminibacter mediatlanticus TB-2] Length = 252 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 78/304 (25%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N S +++ K+ + D++ +QE+ N + Sbjct: 1 MKICTFNVN----------------SIRSRLEIIQNLVKDYNIDVLCMQEIKVENEKFPI 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + CI + +A K R Sbjct: 45 IDGDFECIIH-------------GQKRLHGVATCSKYPIE------GYQKGFDGELNEPR 85 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 L+ I +++I+ ++Y L +W+ + + Sbjct: 86 FIYTLI-----NVIHIINIYAPLG-------DSYGDRFEYKMYFYDKLFEWLKRFDLNKD 133 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GDFN L + +E Sbjct: 134 KVLICGDFNISHTSLDVWDEEIWEGEVTHLPEERAILSKFLDIGFIDII-REVYKDEKVF 192 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DY ++ + + + + R SDH PI Sbjct: 193 TFYDYRGAAVYKNEGLRLDYILVSKPLFSKFKKVDIL-----TSIRRKRKPTPSDHVPII 247 Query: 300 IDYD 303 ++D Sbjct: 248 AEFD 251 >gi|78067925|ref|YP_370694.1| exodeoxyribonuclease III xth [Burkholderia sp. 383] gi|77968670|gb|ABB10050.1| Exodeoxyribonuclease III xth [Burkholderia sp. 383] Length = 257 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 38/307 (12%), Positives = 85/307 (27%), Gaps = 79/307 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+++ N+N + + ++ +AD V +QE + + + A Sbjct: 2 MRVITANLNGIRSAAKKGFF---------------EWLGEQNADCVCVQEIKVSADDLPA 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + ++ +S + + +G S A Sbjct: 47 EFVEPHGFKSYFHHAEKKGYSGAGVYSRREPDDVI--------------IGFGSSEFDAE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R VE K+ V+ +++ S + + L + Sbjct: 93 GRY-----VEARYGKLSVVSVYVPSGSSGEERQQAKYRFMDEFMPHLAAL--------KK 139 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD N + + + + + + + D R Sbjct: 140 KREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEEREWLTKLFDDVGYVDVFRTLDPRAE 199 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + S + + SDH P Sbjct: 200 QYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKSTSI-----------FKDIKFSDHAP 248 Query: 298 ISIDYDF 304 ++IDYD+ Sbjct: 249 LTIDYDY 255 >gi|328958150|ref|YP_004375536.1| apurinic/apyrimidinic endonuclease [Carnobacterium sp. 17-4] gi|328674474|gb|AEB30520.1| apurinic/apyrimidinic endonuclease [Carnobacterium sp. 17-4] Length = 253 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 74/303 (24%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + + LDAD LQE ++ Sbjct: 1 MKFISWNVNGLRAIVKKGF---------------VEIFEELDADFFCLQETKLQEGQIEL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + ++ A+ K+ + D R Sbjct: 46 DFPGYYDYW-----------NYAEKKGYSGTAIFTKHKPLDVSYGIGKPEHDQEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ ++ +V+ + + + + L +S Sbjct: 91 -----VITLSYPNYYVVTCYTPNSKSELKRLDYRMQWEDDFQLYLKKL--------DSEK 137 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F A Sbjct: 138 PVILCGDLNVAHENIDLKNWKTNQLSAGFSKEERMKFSALLDAGFIDTFRYFYPDLEGAY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + L + + SDHCP+ Sbjct: 198 TWWNYRFNARKTNAGWRIDYFCVSTRLQDHLQEARILD-----------DIVGSDHCPVE 246 Query: 300 IDY 302 + Sbjct: 247 LIL 249 >gi|84385657|ref|ZP_00988688.1| putative phospholipase C precursor [Vibrio splendidus 12B01] gi|84379637|gb|EAP96489.1| putative phospholipase C precursor [Vibrio splendidus 12B01] Length = 451 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 39/293 (13%), Positives = 82/293 (27%), Gaps = 34/293 (11%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + + S+N+ L + SV T D++ LQE S + Sbjct: 179 PNTLNVGSYNLWMLPGVSSNITSRASVLDHTL-----------SGYDVLTLQEAFSSD-- 225 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++ + ++ + R + + D ++ Sbjct: 226 REILFNALAEEYAFRTEVVGGGTSAMYDGGVVTF-SRHPIIETDSIVFEHCSGTDCYADK 284 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW-ITQKK 199 V V+ +G+ + + HL SF + L Q ++ + +T+ Sbjct: 285 ---GVVYTKVDKDGEIYHIFNTHLASFNTP--------AAKRLRRLQLGLMRTFMLTKDI 333 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFW--------KTIDPNDSLIRFPKEKDSRCNANKNL 251 S + AGDFN N + P Sbjct: 334 PSNEAVIYAGDFNIDKNSDFVEYLLMLATLDVDPPEFRGYTNATFDPTINPYAAYNYSGG 393 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +DY + + + + ++ LSDH I+ +++F Sbjct: 394 ADVEYLDYVFVSRMHKRATSNTNAVKLHQRLSSDTWGSWHLSDHFAINGNFEF 446 >gi|71661273|ref|XP_817660.1| MP99 [Trypanosoma cruzi strain CL Brener] gi|70882865|gb|EAN95809.1| MP99, putative [Trypanosoma cruzi] Length = 913 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 95/314 (30%), Gaps = 41/314 (13%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLW---KNSVKRTTSDYTLLRQYAKNLDADIV 69 ++P +R+V+WN+ + G T + Y L + + LDAD++ Sbjct: 614 VLPTPTEELSTLRVVTWNVQ-FNRHSGERTPLGRDGIDWCTPTRYIALAKTMETLDADVI 672 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 +QE+ WC + ++ + S N+ A+R V +L + + Sbjct: 673 SMQEVE-----------PAWCKYLCEQQWVRERYALSCNEDSH--AIRPWGVMLLVKRHL 719 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + + A + + I V + L L + S + Q + Sbjct: 720 RVEGMHHANVAAFAGHTSV---MPEVTITVSKNVPVTIGSLHLLAPYNKNNVSNRTTQLE 776 Query: 190 WLKDWITQKKESLVP---FVIAGDFNRKINYLGN------NDDFWKTIDPNDSL---IRF 237 L + + + ++ GDFN N D W ++P ++ Sbjct: 777 NLTKRMRARPSAGGVPTGAIVMGDFNDYANNYFTFPPELGFKDAWSLLNPENNKNEGYTI 836 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE---------DDIKSR 288 +++ D + + + E D Sbjct: 837 DGDRNPYAGQIIEREFFGRADRVLFASRHLQPIHAELVGTTSVRALGITKQVNCDKAVPE 896 Query: 289 GKRLSDHCPISIDY 302 SDH + +++ Sbjct: 897 YLYPSDHFGLLVEF 910 >gi|156386353|ref|XP_001633877.1| predicted protein [Nematostella vectensis] gi|156220953|gb|EDO41814.1| predicted protein [Nematostella vectensis] Length = 315 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 95/287 (33%), Gaps = 38/287 (13%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ V++N+ + + + L + D+V +QE+ Sbjct: 57 TIKFVTYNMWC-------NYLVSCKPNYRERFEGLAAGVQEF--DVVMVQEVFILQVGPV 107 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNN------DIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 F + + ER H + + IA+ K +S A + Sbjct: 108 EFTGCASAMVEAMERHGFHYRTSFTDTIPHIFGQSNGIAIFSKIPFHYTKSVVFKDAAFA 167 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R N+ V ++I+GK+++V + H + + + Q + L+ + Sbjct: 168 -ERVNNKGFVFAEMKISGKQVFVFNTHT------------DAHKEEIRAAQMEQLRKTV- 213 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 F++ GDFN NY + + + ++ N+ + + N N Sbjct: 214 LNLPKSAYFIVGGDFNINPNYPPLDGNEKEYLNLNEKMKKMRLVPVFTER-NATHLNGGS 272 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 DY +DQ + + + +SDH + I+ + Sbjct: 273 YDYVFIDQKFKV--------QDHKVINLLTKNHGMVSDHYGLYIEIE 311 >gi|148675569|gb|EDL07516.1| apurinic/apyrimidinic endonuclease 2, isoform CRA_d [Mus musculus] Length = 530 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 79/338 (23%), Gaps = 79/338 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--- 80 +R+VSWNIN + + T LR+ LDADIV LQE V Sbjct: 9 LRVVSWNINGIRSPLQGLACQEPSSC----PTALRRVLDELDADIVCLQETKVTRDVLTE 64 Query: 81 --------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYP 129 F + YS + D T +A L Sbjct: 65 PLAIVEGYNSYFSFSRSRSGYSECSCPSPGVATFCKDSATPVAAEEGLSGVFATLNGDIG 124 Query: 130 LLGAKDSFSRAGNRRA-----------VELLVEINGKKIWVLDIHLKS-FCFLDSLENTY 177 G D F++ R +E K + +++++ Sbjct: 125 CYGNMDEFTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFK 184 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDD 223 LL +A+ L + +I GD N Sbjct: 185 MRFYRLLQMRAEALLA-------AGSHVIILGDLNTAHRPIDHCDASSLECFEEDPGRKW 237 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNL------------------RNKIPIDYFVMDQN 265 + + +DY + D+ Sbjct: 238 MDGLLSNPGDEAGPHIGLFMDSYRYLHPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRA 297 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 I + SDHCP+ + Sbjct: 298 L----------VIDTFQASFLLPEVMGSDHCPVGAVLN 325 >gi|125718506|ref|YP_001035639.1| exodeoxyribonuclease [Streptococcus sanguinis SK36] gi|125498423|gb|ABN45089.1| Exodeoxyribonuclease, putative [Streptococcus sanguinis SK36] Length = 322 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 84/305 (27%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q + +ADI+ +QE Sbjct: 48 MKLISWNIDSLNAALTSDSARAQLS------QAVLQTLQAENADIIAIQETKLSATGPTK 101 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K ++P +GA + G Sbjct: 102 KHLEILTNLFPEYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGR- 160 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E +G +V ++ + + + ++ L + Sbjct: 161 ---IITLEFDG--FFVTQVYTPNAGDGLKRLDDRQVWDAKYAEYLATL--------DEQK 207 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F N Sbjct: 208 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQY 267 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 268 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 316 Query: 299 SIDYD 303 ++ + Sbjct: 317 VMEIE 321 >gi|26354044|dbj|BAC40652.1| unnamed protein product [Mus musculus] gi|123223480|emb|CAM21422.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus] Length = 523 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 79/338 (23%), Gaps = 79/338 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--- 80 +R+VSWNIN + + T LR+ LDADIV LQE V Sbjct: 2 LRVVSWNINGIRSPLQGLACQEPSSC----PTALRRVLDELDADIVCLQETKVTRDVLTE 57 Query: 81 --------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYP 129 F + YS + D T +A L Sbjct: 58 PLAIVEGYNSYFSFSRSRSGYSECSCPSPGVATFCKDSATPVAAEEGLSGVFATLNGDIG 117 Query: 130 LLGAKDSFSRAGNRRA-----------VELLVEINGKKIWVLDIHLKS-FCFLDSLENTY 177 G D F++ R +E K + +++++ Sbjct: 118 CYGNMDEFTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFK 177 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDD 223 LL +A+ L + +I GD N Sbjct: 178 MRFYRLLQMRAEALLA-------AGSHVIILGDLNTAHRPIDHCDASSLECFEEDPGRKW 230 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNL------------------RNKIPIDYFVMDQN 265 + + +DY + D+ Sbjct: 231 MDGLLSNPGDEAGPHIGLFMDSYRYLHPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRA 290 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 I + SDHCP+ + Sbjct: 291 L----------VIDTFQASFLLPEVMGSDHCPVGAVLN 318 >gi|311347452|gb|ADP90671.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] Length = 518 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 77/331 (23%), Gaps = 71/331 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+VSWNIN + + + + LDADIV LQE + Sbjct: 2 LRVVSWNINGIRRPLQGVANQEPSNCAAV---AVGRILDELDADIVCLQETKVTRDALTE 58 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKDS 136 + + ++S R + + A V G D Sbjct: 59 PLAIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGDVGCYGNMDE 118 Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLL 184 F++ R E K + +++++ LL Sbjct: 119 FTQEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADPGRPERLVFKMRFYRLL 178 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230 +A+ L + +I GD N + Sbjct: 179 QIRAEALLA-------AGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDSLLSN 231 Query: 231 NDSLIRFPKEKDSRCN------------------ANKNLRNKIPIDYFVMDQNAYKFLIQ 272 ++L +DY + D+ Sbjct: 232 LGCQSASHVGPFIDSYRCFQPKQEGAFTCWSAVTGARHLNYGSRLDYVLGDRTL------ 285 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 I + SDHCP+ Sbjct: 286 ----VIDTFQASFLLPEVMGSDHCPVGAVLS 312 >gi|304310166|ref|YP_003809764.1| Exodeoxyribonuclease III [gamma proteobacterium HdN1] gi|301795899|emb|CBL44100.1| Exodeoxyribonuclease III [gamma proteobacterium HdN1] Length = 277 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 31/269 (11%), Positives = 74/269 (27%), Gaps = 59/269 (21%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 ++ + D+V +QE + +F + + D+ ++ +AV Sbjct: 40 EWIQKRQPDVVCIQETK--------AQLHQLDVFITDIPGYHSYFFDAQKKGYSGVAVYC 91 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K D R ++++ + V ++L S D + Sbjct: 92 KREPDRVVRGLGFPIADDEGRY---------LQVDFGDLSVASLYLPSGSASDEAQEKKY 142 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--------------- 223 + +E +++ GD+N + + Sbjct: 143 RFLDTFLPMMKA-------WREDGRRYILCGDWNIAHKNIDIKNWRSNQKNSGFLPEERA 195 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQES 274 + + + + +S + N+ IDY ++ + Sbjct: 196 WLDRVFDEQGWVDAFRAVNSEADQYTWWSNRGQAWAKNVGWRIDYQIVSPELRDTISSTE 255 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +R SDH P+ + YD Sbjct: 256 I-----------YKDERFSDHAPLLMSYD 273 >gi|312194345|ref|YP_004014406.1| endonuclease/exonuclease/phosphatase [Frankia sp. EuI1c] gi|311225681|gb|ADP78536.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EuI1c] Length = 1037 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 87/362 (24%), Gaps = 90/362 (24%) Query: 25 RLVSWNINTLSEQEGV---------------------------SLWKNSVKRTTSD---- 53 RL ++N+ G + R ++ Sbjct: 582 RLATFNVENYFSMTGEQYVSMGLGTCTYYTDRQGNRIGVNTCTGTDGSPGPRGAANDASF 641 Query: 54 ---YTLLRQYAKNLDADIVFLQEMGSYN---------------AVAKVFPKNTWCIFYST 95 + + L A IV L+E+ + + A+ N W S Sbjct: 642 ARQQSKIVTGINRLGASIVSLEEVENSSKFGEPRDTTLAGLVGALNAAAGSNVWEFVPSP 701 Query: 96 ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK-DSFSRAGNRRAVELLVEING 154 + I TA + V ++ + L G D + R + + G Sbjct: 702 PDDQLPPLAQQDV-IRTAFIYKPAAVSLVGAAKVLTGDSADGQPFSIAREPLAQGFKKAG 760 Query: 155 KK----IWVLDIHLKSFCFL------------DSLENTYSPSCSLLSQQAQWLKDWITQK 198 V+ HLKS S + Q L + TQ Sbjct: 761 ATDKDAFLVVANHLKSKGADATGLYPGDAEDTSSPAVDQGAFNATRVHQVTDLSAFATQT 820 Query: 199 KES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + GDFN + S + ++ + Sbjct: 821 AAGLGTNRIFLLGDFNAYTGEDPMQVLYGAGYVDLGSTLDPAEQT------YSYNSLEGS 874 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---------------LSDHCPISID 301 +D+ + + A + +I E + + SDH P+ + Sbjct: 875 LDHVLANPAALSMVTGADVWQINAQEAVAFAYSRYNYNATQLFNGTDPFAASDHDPVVVG 934 Query: 302 YD 303 Sbjct: 935 LT 936 >gi|237720311|ref|ZP_04550792.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 2_2_4] gi|229450062|gb|EEO55853.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 2_2_4] Length = 353 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 39/343 (11%), Positives = 91/343 (26%), Gaps = 59/343 (17%) Query: 2 IRKYVLALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKN----------- 45 ++K ++ L + + Q+ + +N+ L + + Sbjct: 13 MKKSLMTLGVLALFVLMAYGQEKKFALYSVAFYNMENLFDTIHDEGKNDYEYLPNGTNQW 72 Query: 46 SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + + + + + L D I+ + E+ +Y + + + Sbjct: 73 NTMKYKAKLKNMSEILSLLSTDKLPMGPAIIGVSEIENYRVLEDILKQP---ALADRGYR 129 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 H + + + A K + + + + R + I +K+ Sbjct: 130 YVHYEGEDQRGVDCAFFYNPKLFELTNSKL-VPYVYINDTVHKTRGFLIASGNIADEKMH 188 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 + H S SP+ +Q + +KD + +++S VI GD N Sbjct: 189 FIVNHWPSR-------AAASPARERAGEQVRAIKDSL-LREDSAAKIVIMGDMNDDPMDK 240 Query: 219 GNNDDFWKTID-----PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLI 271 P D + D V N Sbjct: 241 SMAVALGAKRKPVDAGPTDLYNPWWDTLKKGYGTLMYKGKWNLFDQIVFTGNLLGTDRST 300 Query: 272 QESFSEILYNEDDIKSRGKR-----------------LSDHCP 297 + + +++ D + + + SDH P Sbjct: 301 LKFYKHEIFSRDFMFQKEGKYKGYPKRTQAGGVWLNGYSDHLP 343 >gi|254409485|ref|ZP_05023266.1| endonuclease/exonuclease/phosphatase family [Microcoleus chthonoplastes PCC 7420] gi|196183482|gb|EDX78465.1| endonuclease/exonuclease/phosphatase family [Microcoleus chthonoplastes PCC 7420] Length = 287 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 39/284 (13%), Positives = 85/284 (29%), Gaps = 48/284 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ LV++NI + + + ++ DAD + LQE+ + Sbjct: 39 ELTLVTYNIWFSDYH------------RQQRHEAILKLIQDCDADAIALQEVTPTSLKLI 86 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + +YS++ + + K L+ + Sbjct: 87 LEQDWVRKNYYSSDTTGVTVNP-------YGVLLLSKLPIDRLFFCDLIS-------QMS 132 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R+ + +++NG+ + +HL+S S+ + Q + + Sbjct: 133 RKFLCAELQLNGQNFNIATVHLES----------KKKFASIRTIQLADIFPLLE----HA 178 Query: 203 VPFVIAGDFN-------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 V+ GDFN N D W + ++ + + K K+ Sbjct: 179 DHAVLMGDFNFCSSWKSENRNLDPRYQDMWAVLRGDEPGYTEDTDINLMRLQQKQKHKKV 238 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 D ++ + + ES + S SDH + Sbjct: 239 RFDRILLRSASQSW-QPESIERLGLKPISRNSPNVFPSDHFGLV 281 >gi|5410346|gb|AAD43041.1|AF119046_1 APE2 protein [Homo sapiens] Length = 518 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 77/331 (23%), Gaps = 71/331 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+VSWNIN + + + + LDADIV LQE + Sbjct: 2 LRVVSWNINGIRRPLQGVANQEPSNCAAV---AVGRILDELDADIVCLQETKVTRDALTE 58 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKDS 136 + + ++S R + + A V G D Sbjct: 59 PLAIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGDVGCYGNMDE 118 Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLL 184 F++ R E K + +++++ LL Sbjct: 119 FTQEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADPGRPERLVFKMRFYRLL 178 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230 +A+ L + +I GD N + Sbjct: 179 QIRAEALLA-------AGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDSLLSN 231 Query: 231 NDSLIRFPKEKDSRCN------------------ANKNLRNKIPIDYFVMDQNAYKFLIQ 272 ++L +DY + D+ Sbjct: 232 LGCQSASHVGPFIDSYRCFQPKQEGAFTCWSAVTGARHLNYGSRLDYVLGDRTL------ 285 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 I + SDHCP+ Sbjct: 286 ----VIDTFQASFLLPEVMGSDHCPVGAVLS 312 >gi|18375507|ref|NP_055296.2| DNA-(apurinic or apyrimidinic site) lyase 2 [Homo sapiens] gi|73921676|sp|Q9UBZ4|APEX2_HUMAN RecName: Full=DNA-(apurinic or apyrimidinic site) lyase 2; AltName: Full=AP endonuclease XTH2; AltName: Full=APEX nuclease 2; AltName: Full=APEX nuclease-like 2; AltName: Full=Apurinic-apyrimidinic endonuclease 2; Short=AP endonuclease 2 gi|4996359|dbj|BAA78422.1| APEX nuclease-like 2 protein [Homo sapiens] gi|5102658|emb|CAB45242.1| AP endonuclease XTH2, putative [Homo sapiens] gi|10336529|dbj|BAB13764.1| apurinic/apyrimidinic endonuclease 2 [Homo sapiens] gi|12804203|gb|AAH02959.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Homo sapiens] gi|57471611|emb|CAI43126.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Homo sapiens] gi|57864642|gb|AAW56941.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Homo sapiens] gi|119613615|gb|EAW93209.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2, isoform CRA_b [Homo sapiens] gi|123993987|gb|ABM84595.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [synthetic construct] gi|123997761|gb|ABM86482.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [synthetic construct] gi|208965822|dbj|BAG72925.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [synthetic construct] gi|311347418|gb|ADP90654.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347420|gb|ADP90655.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347422|gb|ADP90656.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347424|gb|ADP90657.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347426|gb|ADP90658.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347428|gb|ADP90659.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347430|gb|ADP90660.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347432|gb|ADP90661.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347434|gb|ADP90662.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347436|gb|ADP90663.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347438|gb|ADP90664.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347440|gb|ADP90665.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347442|gb|ADP90666.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347444|gb|ADP90667.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347446|gb|ADP90668.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347448|gb|ADP90669.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347450|gb|ADP90670.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347454|gb|ADP90672.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347456|gb|ADP90673.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347458|gb|ADP90674.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347460|gb|ADP90675.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347462|gb|ADP90676.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347464|gb|ADP90677.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347466|gb|ADP90678.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347468|gb|ADP90679.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347470|gb|ADP90680.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347472|gb|ADP90681.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347474|gb|ADP90682.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347476|gb|ADP90683.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347478|gb|ADP90684.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347480|gb|ADP90685.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347482|gb|ADP90686.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347484|gb|ADP90687.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347488|gb|ADP90689.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347490|gb|ADP90690.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347492|gb|ADP90691.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347494|gb|ADP90692.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347496|gb|ADP90693.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] Length = 518 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 77/331 (23%), Gaps = 71/331 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+VSWNIN + + + + LDADIV LQE + Sbjct: 2 LRVVSWNINGIRRPLQGVANQEPSNCAAV---AVGRILDELDADIVCLQETKVTRDALTE 58 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKDS 136 + + ++S R + + A V G D Sbjct: 59 PLAIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGDVGCYGNMDE 118 Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLL 184 F++ R E K + +++++ LL Sbjct: 119 FTQEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADPGRPERLVFKMRFYRLL 178 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230 +A+ L + +I GD N + Sbjct: 179 QIRAEALLA-------AGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDSLLSN 231 Query: 231 NDSLIRFPKEKDSRCN------------------ANKNLRNKIPIDYFVMDQNAYKFLIQ 272 ++L +DY + D+ Sbjct: 232 LGCQSASHVGPFIDSYRCFQPKQEGAFTCWSAVTGARHLNYGSRLDYVLGDRTL------ 285 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 I + SDHCP+ Sbjct: 286 ----VIDTFQASFLLPEVMGSDHCPVGAVLS 312 >gi|83950914|ref|ZP_00959647.1| exodeoxyribonuclease III, putative [Roseovarius nubinhibens ISM] gi|83838813|gb|EAP78109.1| exodeoxyribonuclease III, putative [Roseovarius nubinhibens ISM] Length = 262 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 28/308 (9%), Positives = 66/308 (21%), Gaps = 75/308 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAV 80 L +WNIN ++ + D++ LQE S Sbjct: 2 SFSLATWNIN----------------SVRLREPIVCKLLAEEGPDVLCLQECKSPVEKIP 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 F + + + +A+ K + Sbjct: 46 TAAFQELGYHHMI-----------ARGQKGYNGVAILSKLPIEDVGDRDFAALGHARH-- 92 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 V +E + + + ++ + D + + ++DW ++ Sbjct: 93 -----VAGRLENG---VTIHNFYVPAG--GDVPDRAVNEKFGQKLDYLTEMRDWFHAERP 142 Query: 201 SLVPFVIAGDFNRKINYLGN--NDDFWKTID-------------PNDSLIRFPKEKDSRC 245 ++ GD N + K + + Sbjct: 143 EKS--ILVGDLNIAPREDDVWNHKQLLKVVSHTPVEVEHFNEVMDAGQWSDVTRADIPEG 200 Query: 246 NANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ + ++ SDH Sbjct: 201 LLYSWWSYRARDWDVADKGRRLDHVWATPDIRNAAHSS-------RVLRDARGWEKPSDH 253 Query: 296 CPISIDYD 303 P+ +D Sbjct: 254 APVFAHFD 261 >gi|82753368|ref|XP_727650.1| sphingomyelin/lysocholinephospholipid-phospholipase C [Plasmodium yoelii yoelii str. 17XNL] gi|23483595|gb|EAA19215.1| sphingomyelin/lysocholinephospholipid-phospholipase C-related [Plasmodium yoelii yoelii] Length = 504 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 29/233 (12%), Positives = 65/233 (27%), Gaps = 40/233 (17%) Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 + ++ I V K+ + + K + + A+ L + I ++ Sbjct: 269 SGGPKFRHFLNGGIIVLSKHKISQKHALIFENCKFPEMFSA-KGAIYLKFNVKNNVIHLV 327 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-----TQKKESLVPFVIAGDFNRKI 215 HL + +Q + L W+ ++ ++ P GDFN + Sbjct: 328 ATHLHAG--------NTKSDEKCRRKQIEELTKWVYNGVPSKFIKNSEPLFFVGDFNIRY 379 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI------------DYFVMD 263 + + + F + + I DY ++ Sbjct: 380 --IKDENFFKEITSSKYLNCTVTNNTLETTYDSSINDYCRYIEDDFEHKYVDTLDYILVS 437 Query: 264 QNAYKF-LIQESFSEILYN-----------EDDIKSRGKRLSDHCPISIDYDF 304 +N+ ++ ++ + Y SDH PI + F Sbjct: 438 KNSNIKTIVPQTAVQHGYKPISIFKTILCCIPYQSINIHHASDHFPIYATFKF 490 Score = 39.5 bits (90), Expect = 0.60, Method: Composition-based stats. Identities = 11/84 (13%), Positives = 28/84 (33%), Gaps = 2/84 (2%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 Q ++S+N+ + + ++T Y + + + DI+ L E+ + Sbjct: 5 TPPDQHFTIMSYNVQMIPVPISTKINIGYRQKTLEKY--ICELDNIYNTDILVLNEVFTK 62 Query: 78 NAVAKVFPKNTWCIFYSTERLINH 101 A + F ++ Sbjct: 63 QAYNMLTTGEIKKRFPYHTNILGE 86 >gi|224023659|ref|ZP_03642025.1| hypothetical protein BACCOPRO_00371 [Bacteroides coprophilus DSM 18228] gi|224016881|gb|EEF74893.1| hypothetical protein BACCOPRO_00371 [Bacteroides coprophilus DSM 18228] Length = 637 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 41/286 (14%), Positives = 82/286 (28%), Gaps = 57/286 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 V ++++S+NI +G +DY + + + AD+V LQE+ S Sbjct: 34 PVENDLKIISYNIRHGEGLDG-----------KTDYVRIARMFREQQADVVALQEVDSVT 82 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + +K S + + + + + + L G Sbjct: 83 GRSHKKDVLR-EVANEALMYPVFAKAISFDGGSYGVGLLAREHPLSVERIALPG------ 135 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R R + + ++ HL Q L Sbjct: 136 REEARVLLLAEFD----DYYIGCTHLSLTPED----------------QLASLDVIRKIA 175 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 PF++AGD+N + F + + + + ID Sbjct: 176 SRLNKPFLLAGDWNALPESQTI----------QEIRKDFTLLNNLKQATYPANKPEDVID 225 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 Y + + K ++Q+ + + SDH P+ F Sbjct: 226 YIAVWKATGKSVVQKGGTVLPDTVS---------SDHRPVMAKVRF 262 >gi|322373807|ref|ZP_08048342.1| RgfB protein [Streptococcus sp. C150] gi|321277179|gb|EFX54249.1| RgfB protein [Streptococcus sp. C150] Length = 270 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 37/284 (13%), Positives = 77/284 (27%), Gaps = 54/284 (19%) Query: 48 KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST------------ 95 + + L++ D++ QE+ + V + S Sbjct: 14 EDAEGKFQTLKKQILKAQYDLICFQEVNQEIETSVVATDAYYHALPSATPIHQDHFVRLL 73 Query: 96 ----------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + ++ +AV + + L+ D + RR Sbjct: 74 VEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTASE--ILVSDVDDPTDYHTRRV 131 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++G+++ V +HL + E + K P Sbjct: 132 AVAETTVDGREVAVASVHLSWWDKGFQEEWARIE----------------ERFKAIGKPL 175 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYF 260 ++AGDFN G + DS + S + K + IDY Sbjct: 176 ILAGDFNNPAGQEGYQAILASPLHLQDSFEVAKETTGSYTVGPGIDGWKGNEEPLRIDYV 235 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 Q+ ++ + + +SDH + + +F Sbjct: 236 FASQD---------WTVNRLSVIFDGNNQPLVSDHYGLEAELEF 270 >gi|330924640|ref|XP_003300719.1| hypothetical protein PTT_12052 [Pyrenophora teres f. teres 0-1] gi|311325004|gb|EFQ91187.1| hypothetical protein PTT_12052 [Pyrenophora teres f. teres 0-1] Length = 617 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 40/338 (11%), Positives = 85/338 (25%), Gaps = 66/338 (19%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 ++ + ++N+ L+ S + +Y ++ D++F+QE+ Sbjct: 293 VSSGGCEGFTFGAYNVENLAPNSSHHG---------SLARHVVEYMRS--PDVIFVQEVQ 341 Query: 76 SYNAVA-----------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 N F + +I A Sbjct: 342 DDNGPTNNGVVSANLTLTTLTAAITLAGGPNYTFTDIVPTDSQDGGQPGGNIRVAYLYNP 401 Query: 119 KNVRVLQ------------------QSYPLLGAKDSFSRAGNRRAVELLVEINGKK---- 156 +VR+ + P + + +R+ + E+ K Sbjct: 402 NHVRLYNPNPGGALDANEVLAGPSLKYNPGRIEPANAAWTSSRKPLVAQWEVIRKASAQK 461 Query: 157 -----IWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKESL--VPF 205 + +++H S SL P +Q++ +I Sbjct: 462 NKPDVFFTVNVHFGSKGGSSSLHGDARPPVNGGVEDRLEQSRLTAKFIKDILSKDKSARI 521 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 + AGDFN + + TI L N +D+ + + Sbjct: 522 ITAGDFNEFAFVEPLEE--YTTISGLKDLDAVVGIDKVERYTYMFDMNTQQLDHMYVSPS 579 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K + ++SDH P + Sbjct: 580 LAKKSKAAYEHIH---VNTWPEFAAQVSDHDPSVAKLN 614 >gi|311109328|ref|YP_003982181.1| exodeoxyribonuclease III 2 [Achromobacter xylosoxidans A8] gi|310764017|gb|ADP19466.1| exodeoxyribonuclease III 2 [Achromobacter xylosoxidans A8] Length = 262 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 36/270 (13%), Positives = 69/270 (25%), Gaps = 59/270 (21%) Query: 60 YAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + + AD++ LQE + + + + + +S Sbjct: 23 WMEKHAADVLCLQEIKVSHEDLTDDLRHPPGYTGHFHHAVKKGYSGVGIY---------- 72 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 G R + + K + V+ +L S D + Sbjct: 73 ----LRDAAERVNTGLDCEEFDPEGRI-----IRADWKNLSVISAYLPSGSSGDERQQAK 123 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------LGNND 222 L + + K + F+I GD+N L Sbjct: 124 YRFLDRFGPWIDAL---MHEHKTTGREFIICGDWNIAHKEIDLKNWKGNLKNSGFLPEER 180 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQE 273 + + + + D R + N+ IDY + Sbjct: 181 AWLTDVFDKRGFVDVFRTIDDRPDQYTWWSNRGQAWAKNVGWRIDYQIATPGIAARARNV 240 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +R SDH P++IDYD Sbjct: 241 AI-----------YKDERFSDHAPLTIDYD 259 >gi|293602414|ref|ZP_06684860.1| exodeoxyribonuclease III [Achromobacter piechaudii ATCC 43553] gi|292819176|gb|EFF78211.1| exodeoxyribonuclease III [Achromobacter piechaudii ATCC 43553] Length = 292 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 38/270 (14%), Positives = 70/270 (25%), Gaps = 59/270 (21%) Query: 60 YAKNLDADIVFLQEMG--SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + + ADI+ LQE+ + + + + +S Sbjct: 53 WMEKHAADILCLQEIKIADADLTEDLRHPPGYTGHFHHAVKKGYSGVGIY---------- 102 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 +G R + + K + V+ +L S D + Sbjct: 103 ----LRDAAERVNIGLGCEEFDPEGRI-----IRADWKNLSVISAYLPSGSSGDERQQAK 153 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------LGNND 222 L + + K + FVI GD+N L Sbjct: 154 YRFLDRFGPWIDAL---MHEHKTTGREFVICGDWNIAHKEIDLKNWKGNMKNSGFLPEER 210 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQE 273 + + + + D R + N+ IDY + Sbjct: 211 AWLTDVFDKRGFVDVFRTIDDRPDQYTWWSNRGQAWAKNVGWRIDYQIATPGIAARARNV 270 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +R SDH P++IDYD Sbjct: 271 AI-----------YKDERFSDHAPLTIDYD 289 >gi|150021512|ref|YP_001306866.1| endonuclease/exonuclease/phosphatase [Thermosipho melanesiensis BI429] gi|149794033|gb|ABR31481.1| Endonuclease/exonuclease/phosphatase [Thermosipho melanesiensis BI429] Length = 350 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 38/316 (12%), Positives = 83/316 (26%), Gaps = 58/316 (18%) Query: 22 QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + + WNI G + S + + + ADI QE Sbjct: 55 NTLTIFDWNIGYAGLGKDMDFFLDGGKNAIVPSKLVGEY-LNGILEVLREKRADIYLFQE 113 Query: 74 MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 + + + ++ + + + + + +A K Sbjct: 114 IDVKSWRTHYVNQLEFLKQIGDYDIAFAYNYKVLFVPVPYLNPMGKVEAGLATFSKYKID 173 Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + Y L G ++ R + + +N K++ +L+IH ++ Sbjct: 174 EAKRYSLPGEYSWPTKLFQLDRCLLLTRIRTLNNKELVLLNIHPSAYDKGGV-------- 225 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK---------INYLGNNDDFWKTIDPN 231 L +Q +++ + E VI GD+N + + Sbjct: 226 --LREKQLKFIMKLAKNEYEKGNYVVIGGDWNSEFYSEKLFGYTEEKPEAYIKLPELFKL 283 Query: 232 DSLIRFPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + + + ID F + N ++ Sbjct: 284 NGWKWGISKNAPTNRSISAPYVKGETFVTVIDGFYVSPNIEILEVEN------------L 331 Query: 287 SRGKRLSDHCPISIDY 302 G SDH P+ + Sbjct: 332 DLGFEYSDHNPVVMKI 347 >gi|21654881|gb|AAK85705.1| CCR4 [Drosophila melanogaster] Length = 566 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 40/343 (11%), Positives = 94/343 (27%), Gaps = 63/343 (18%) Query: 24 VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++ +N+ + + ++ + + ++ ADI+ LQE+ + Sbjct: 206 FTVMCYNVLCDKYATRQMYGYCPSWALCWEYRKKSIIDEIRHYAADIISLQEIETEQFYH 265 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLL------ 131 P+ + + +K S + AI R ++++S Sbjct: 266 FFLPELKNDGYEGIFSPKSRAKTMSELERKYVDGCAIFFRASKFTLIKESLIEFNQLAMA 325 Query: 132 ---GAKDSFSRAGNR-----RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 G+ + +R + A+ + E + + + + + + C + Sbjct: 326 NAEGSDNMLNRVMPKDNIGLAALLKVKENAWEPMSEVTQISQPLLVCTAHIHWDPEFCDV 385 Query: 184 LSQQAQWLKDWITQKKESLVP--------------FVIAGDFNRKINYLGN--------- 220 Q L + + + ++ GDFN + Sbjct: 386 KLIQTMMLSNELKTIIDEASHSFRPGHKNDSNAVQLLLCGDFNSLPDSGVVEFLGKGRVS 445 Query: 221 ----------NDDFWKTIDPNDSLIRFPKEKDSRCN-------ANKNLRNKIPIDYFVMD 263 + + ND+ K + N K IDY Sbjct: 446 MDHLDFKDMGYKSCLQRLLSNDTNEFTHSFKLASAYNEDIMPHTNYTFDFKGIIDYIFYT 505 Query: 264 QNAYK---FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + L S + N+ SDH P+ ++ + Sbjct: 506 KTGMVPLGLLGPVSNDWLRENKVVGCPHPHIPSDHFPLLVELE 548 >gi|73921677|sp|Q68G58|APEX2_MOUSE RecName: Full=DNA-(apurinic or apyrimidinic site) lyase 2; AltName: Full=APEX nuclease 2; AltName: Full=Apurinic-apyrimidinic endonuclease 2; Short=AP endonuclease 2 gi|51259055|gb|AAH78633.1| Apurinic/apyrimidinic endonuclease 2 [Mus musculus] Length = 516 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 78/331 (23%), Gaps = 72/331 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-- 81 +R+VSWNIN + + T LR+ LDADIV LQE V Sbjct: 2 LRVVSWNINGIRSPLQGLACQEPSSC----PTALRRVLDELDADIVCLQETKVTRDVLTE 57 Query: 82 --KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDS 136 + +S R D T +A L G D Sbjct: 58 PLAIVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYGNMDE 117 Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLL 184 F++ R +E K + +++++ LL Sbjct: 118 FTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLL 177 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230 +A+ L + +I GD N + Sbjct: 178 QMRAEALLA-------AGSHVIILGDLNTAHRPIDHCDASSLECFEEDPGRKWMDGLLSN 230 Query: 231 NDSLIRFPKEKDSRCNANKNL------------------RNKIPIDYFVMDQNAYKFLIQ 272 + +DY + D+ Sbjct: 231 PGDEAGPHIGLFMDSYRYLHPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRAL------ 284 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 I + SDHCP+ + Sbjct: 285 ----VIDTFQASFLLPEVMGSDHCPVGAVLN 311 >gi|21541818|ref|NP_084219.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Mus musculus] gi|19912820|dbj|BAB88654.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus] gi|22830557|dbj|BAC11807.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus] gi|26341548|dbj|BAC34436.1| unnamed protein product [Mus musculus] gi|123223479|emb|CAM21421.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus] gi|148675566|gb|EDL07513.1| apurinic/apyrimidinic endonuclease 2, isoform CRA_a [Mus musculus] Length = 516 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 78/331 (23%), Gaps = 72/331 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-- 81 +R+VSWNIN + + T LR+ LDADIV LQE V Sbjct: 2 LRVVSWNINGIRSPLQGLACQEPSSC----PTALRRVLDELDADIVCLQETKVTRDVLTE 57 Query: 82 --KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDS 136 + +S R D T +A L G D Sbjct: 58 PLAIVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYGNMDE 117 Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLL 184 F++ R +E K + +++++ LL Sbjct: 118 FTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLL 177 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230 +A+ L + +I GD N + Sbjct: 178 QMRAEALLA-------AGSHVIILGDLNTAHRPIDHCDASSLECFEEDPGRKWMDGLLSN 230 Query: 231 NDSLIRFPKEKDSRCNANKNL------------------RNKIPIDYFVMDQNAYKFLIQ 272 + +DY + D+ Sbjct: 231 PGDEAGPHIGLFMDSYRYLHPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRAL------ 284 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 I + SDHCP+ + Sbjct: 285 ----VIDTFQASFLLPEVMGSDHCPVGAVLN 311 >gi|311900561|dbj|BAJ32969.1| hypothetical protein KSE_72140 [Kitasatospora setae KM-6054] Length = 296 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 42/323 (13%), Positives = 81/323 (25%), Gaps = 73/323 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78 +RL ++N+ + L+ LDAD++ LQE+ Sbjct: 1 MRLATFNVLHGRPVRADGRPAAAGPEPFGPGPLIAAA-TALDADVLALQELDRRQDRTGH 59 Query: 79 -----AVAKVFPKNTWCIFYSTER-------------------LINHSKRDSNNDIHTAI 114 AVA+ W + + Sbjct: 60 TDQARAVAEATGATDWRYATALHARAAPGRRWEPDPAEPGLRLYGPPGTGHDGQSPSHGV 119 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFS------------RAGNRRAVELLVEINGKKIWVLDI 162 A+ + + ++ L + + R R A+ ++ + + Sbjct: 120 ALITRLPVLAWHAHRLPASPLAAPLPMPGRPGLTVVRDRPRAALAAVLRGRRGPFTAVVL 179 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---RKINYLG 219 HL F + Q ++ WI P ++ GDFN R Sbjct: 180 HLSLFPGSNVR-------------QLLAVRRWIADLP---RPHLLLGDFNLGGRLPATAL 223 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 D +R R ++ +D+ + + + Sbjct: 224 RAADLLTPAGAGTPGGPAGWHDLARARTFPAHRPRLQLDHILASG--LPRDHPHTAHYLR 281 Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302 LSDH P+ +D Sbjct: 282 LP----------LSDHRPLVVDL 294 >gi|295428588|ref|ZP_06821215.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus EMRSA16] gi|295127570|gb|EFG57209.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp. aureus EMRSA16] Length = 231 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 65/216 (30%), Gaps = 18/216 (8%) Query: 97 RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK 156 S +A+ K + + F N+ V +E NGK Sbjct: 19 WDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNGKN 77 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKI 215 + V+ H +S DS + ++Q + + D++ + I GD N Sbjct: 78 VHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNVN- 132 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK-- 268 D K ++ ND L N +DY D++ + Sbjct: 133 KGTEEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQPK 192 Query: 269 FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300 L+ E +E D + SDH PI Sbjct: 193 QLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 228 >gi|237712213|ref|ZP_04542694.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229453534|gb|EEO59255.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 353 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 91/309 (29%), Gaps = 74/309 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + ++++V++N+++ + + + D++ QE Sbjct: 94 PTKYANENRLKIVTYNVHSFGNEITGFS-----------AKEFAEMMNKEETDVLCFQEY 142 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + +NT+ + S + A+ + Q+ Sbjct: 143 RGNGDFTEQDLQNTYA----------KTFPYSFIPEGLSQAIYSRYPIKQSQTIEFPNTN 192 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD----------------------S 172 + A+ +++ G I ++++H+++ F Sbjct: 193 N--------GAIWADLDVKGMTIRIINVHMQTTNFDRMRSKAAQARGAQDEEQERAIYLD 244 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 + + + + QA+ + I + P ++ GDFN + + Sbjct: 245 YSDNFRENTVRRAGQAEQISSLINATE---YPLIVCGDFNDPPG-TFTYETLKSGLKDG- 299 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + +L + IDY L + I Y+ + Sbjct: 300 -FQTAGEGYGATYRGVHHL---LRIDYLFHS----TLLEGIKYKVIPYD----------M 341 Query: 293 SDHCPISID 301 SDH P+ ++ Sbjct: 342 SDHNPVYLE 350 >gi|225012745|ref|ZP_03703180.1| Endonuclease/exonuclease/phosphatase [Flavobacteria bacterium MS024-2A] gi|225003278|gb|EEG41253.1| Endonuclease/exonuclease/phosphatase [Flavobacteria bacterium MS024-2A] Length = 335 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 38/287 (13%), Positives = 79/287 (27%), Gaps = 57/287 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + ++S+N+ + + + + + + DIV QE A Sbjct: 95 ISVMSYNVRSFNRFNWIDSKNIPAE--------IEGFINKEQPDIVCFQEYAQNEAPD-- 144 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F K + IF K + + K + +S +K+ Sbjct: 145 FEKYPYKIF----------KPYVGSGQI-GSCIISKFPLLNSKSISFKESKN-------- 185 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSL--------ENTYSPSCSLLSQQAQWLKDWI 195 + + + ++H +S + + Q Q + + Sbjct: 186 GGMYTDFLWKKDTLRLYNVHFESLRIDSKDTLIAAEYSQKFRRKINEVFKIQNQQVAQFN 245 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 K + P +I D N + + K + L+ + Sbjct: 246 DIKNLNEYPEIICTDLNNNAFSKSYLN-----LSRGRKDSFLEKGEGFGA-TYNFLKFPL 299 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ + + + Y + LSDH PISI + Sbjct: 300 RIDFIMSSPK---------INILSYKTHKV-----NLSDHKPISIIF 332 >gi|296235588|ref|XP_002762961.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2 [Callithrix jacchus] Length = 518 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 78/331 (23%), Gaps = 71/331 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+VSWNIN + + + + LDADIV LQE + Sbjct: 2 LRVVSWNINGIRRPLQGMANQEPNNCAAV---AVGRILDELDADIVCLQETKVTRDALTE 58 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKDS 136 + + ++S R + + +A V G D Sbjct: 59 PLAIVEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLFATQNGDVGCYGNMDE 118 Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLL 184 F++ R E + + +++++ LL Sbjct: 119 FTQEELRALDSEGRALLTQHKIRTWEGKERTLTLINVYCPHADPGRPERLVFKMRFYRLL 178 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230 +A+ L + +I GD N + Sbjct: 179 QIRAEALLA-------AGSHVIILGDLNTAHRPIDHWDSVNLECFEEDPGRKWMDGLLSN 231 Query: 231 NDSLIRFPKEKDSRCN------------------ANKNLRNKIPIDYFVMDQNAYKFLIQ 272 ++L IDY + D+ Sbjct: 232 LGCQSASHVGPFIDSYRCFQPKQEGAFTCWSAVTGARHLNYGSRIDYVLGDRTL------ 285 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 I + SDHCP+ Sbjct: 286 ----VIDTFQASFLLPEVMGSDHCPVGAVLS 312 >gi|283456347|ref|YP_003360911.1| exodeoxyribonuclease III [Bifidobacterium dentium Bd1] gi|283102981|gb|ADB10087.1| xth Exodeoxyribonuclease III [Bifidobacterium dentium Bd1] Length = 277 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 32/282 (11%), Positives = 71/282 (25%), Gaps = 42/282 (14%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNA-VAKVFPKNTWCI----FYSTERLINHSKRDS 106 + + +A DI +QE+ + + +F + + + + ++ Sbjct: 7 AKRKGIEIWAGRNTPDIWCMQEVRAPQHEIDPIFDEFGFEYSTAGKIADQSELDRLNEVC 66 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 + + + ++ D S R + G + V+ +++ + Sbjct: 67 RIKGRAGVGLLSALPVIDKRYGLPGLDDDVDS---GRWIEADVKTPQGYIVTVVCVYVHA 123 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN---------- 216 D L + + + V+ GDFN Sbjct: 124 GNTDD--PAKMEQKYRFLDTMLERMGQLRDEAAHGGRQSVLCGDFNIAHTPLDIKNAKAN 181 Query: 217 ------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFV 261 K + + + + IDY Sbjct: 182 ETHAGFLPEERAYVDKWLGELEFVDVMRNLAGDIQGPYTWWSQRGRAFDNNVGWRIDYQF 241 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + D + KR SDH P++I YD Sbjct: 242 ATPELAESACG-------FVIDKAPTYDKRWSDHAPLTITYD 276 >gi|237726359|ref|ZP_04556840.1| conserved hypothetical protein [Bacteroides sp. D4] gi|229434885|gb|EEO44962.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] Length = 353 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 91/309 (29%), Gaps = 74/309 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + ++++V++N+++ + + + D++ QE Sbjct: 94 PTKYANENRLKIVTYNVHSFGNEITGFS-----------AKEFAEMMNKEETDVLCFQEY 142 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + +NT+ + S + A+ + Q+ Sbjct: 143 RGNGDFTEQDLQNTYA----------KTFPYSFIPEGLSQAIYSRYPIKQSQTIEFPNTN 192 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD----------------------S 172 + A+ +++ G I ++++H+++ F Sbjct: 193 N--------GAIWADLDVKGMTIRIINVHMQTTNFDRMRSKAAQARGAQDEEQERAIYLD 244 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 + + + + QA+ + I + P ++ GDFN + + Sbjct: 245 YSDNFRENTVRRAGQAEQISSLINATE---YPLIVCGDFNDPPG-TFTYETLKSGLKDG- 299 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + +L + IDY L + I Y+ + Sbjct: 300 -FQTAGEGYGATYRGVHHL---LRIDYLFHS----TLLEGIKYKVIPYD----------M 341 Query: 293 SDHCPISID 301 SDH P+ ++ Sbjct: 342 SDHNPVYLE 350 >gi|227509865|ref|ZP_03939914.1| exodeoxyribonuclease III [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190789|gb|EEI70856.1| exodeoxyribonuclease III [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 252 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 32/301 (10%), Positives = 73/301 (24%), Gaps = 78/301 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + + LDAD +QE Sbjct: 1 MKFISWNVNGLRAVVKKDF---------------AETFQKLDADFFCIQETKMQEG-QLK 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S + PL + + + Sbjct: 45 LDLPGYRQYFNYAERKGYSGTAIF-----------------AKDEPLTVSYGIQAPEFDH 87 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E +++ ++ + + L +S Sbjct: 88 EGRAITLEYPN--FYLVTSYVPNSGAKLKRLDFRMGWDKAFHAYLNQL--------DSHK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + F + + Sbjct: 138 PVILCGDLNVAHHEIDLKNPKSNHHNAGFTDEERQSFTKLLDQGFMDTFRHFYPDKEDIY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV + + ++ SDHCP+ Sbjct: 198 SWWSYRFHSRDRNAGWRIDYFVTSKRLADHISDSKILTDIF-----------GSDHCPVE 246 Query: 300 I 300 + Sbjct: 247 L 247 >gi|145346298|ref|XP_001417629.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144577856|gb|ABO95922.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 474 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 31/287 (10%), Positives = 84/287 (29%), Gaps = 50/287 (17%) Query: 57 LRQYAKNLDAD--IVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 ++ L +D ++ LQE + S V ++ W ++ NH S ++ Sbjct: 1 MKALFDALGSDLKVICLQETKLSSSGDVERLERVEGWDGAHAVCESSNHRVGYSGVAVYW 60 Query: 113 ------------AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 + + + + D +RA + ++ + + Sbjct: 61 RSNEICPTSIERGVCAKGDAGESTMWAGEIAPFADDATRAKEIDGEGRALWVDFGEFVLC 120 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN---- 216 +++ + +++ + + L+ +E ++ GD+N + Sbjct: 121 TVYVPAVFGDPAVDEKTAERAAFKRDFLSALEARYKSLRERGRNVILCGDWNIAPSWKLD 180 Query: 217 -----------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---------RNKIP 256 + D + + + F + + +A Sbjct: 181 RADEDPNAVEPRNPSRDWLAAQLAGDAMVDVFREFFPTLGDAFTCWNVASGAQLSNYGSR 240 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDYF+ D+ ++ + SDH P+ ++ + Sbjct: 241 IDYFLCDRAVTLKRVRGVGVAQKFE----------GSDHAPVYLELE 277 >gi|297710110|ref|XP_002831748.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like [Pongo abelii] Length = 518 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 77/331 (23%), Gaps = 71/331 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+VSWNIN + + + + LDADIV LQE + Sbjct: 2 LRVVSWNINGIRRPLQGVANQEPSNCAAV---AVGRILDELDADIVCLQETKVTRDALTE 58 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKDS 136 + + ++S R + + A V G D Sbjct: 59 PLAIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGDVGCYGNMDE 118 Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLL 184 F++ R E K + +++++ LL Sbjct: 119 FTQEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADPGRPERLVFKMRFYRLL 178 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230 +A+ L + +I GD N + Sbjct: 179 QIRAEALLA-------AGSHVIILGDLNTAHRPIDHWDAVNLECFEDDPGRKWMDSLLSN 231 Query: 231 NDSLIRFPKEKDSRCN------------------ANKNLRNKIPIDYFVMDQNAYKFLIQ 272 ++L +DY + D+ Sbjct: 232 LGCQSASHVGPFIDSYRCFQPKQEGAFTCWSAITGARHLNYGSRLDYVLGDRTL------ 285 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 I + SDHCP+ Sbjct: 286 ----VIDTFQASFLLPEVMGSDHCPVGAVLS 312 >gi|296283199|ref|ZP_06861197.1| putative metal-dependent hydrolase [Citromicrobium bathyomarinum JL354] Length = 237 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 79/279 (28%), Gaps = 55/279 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAVA 81 +L S+NI+ + D + + + +DAD+V LQE Sbjct: 5 TFKLASYNIHKAVGTDR-----------KRDPSRILKVLGEVDADVVVLQEADRRFGQRE 53 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + P + + DS I VR+ + + Sbjct: 54 RTLPDFLVEQHTDYMPVPFDVQHDSMGWHGNTIMVRRDIAVLEHDVLHIPYL-------E 106 Query: 142 NRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R V + + G ++ V +HL S +QA+ + + + + + Sbjct: 107 PRGVVTATLRLPTGPELTVFGMHLDL-------------SGLWRVRQARAIAE-LARVAQ 152 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 P ++AGD N G +F + D + + R +D Sbjct: 153 EQRPTLLAGDLNEWRPNGGCLKEFGRHFTVLDC-----------GRSFHSQRPMGRLDRI 201 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + F R SDH P+ Sbjct: 202 IHGAPL----EAVEFGVHH------SPLASRASDHLPVW 230 >gi|268318601|ref|YP_003292257.1| exodeoxyribonuclease [Lactobacillus johnsonii FI9785] gi|262396976|emb|CAX65990.1| exodeoxyribonuclease [Lactobacillus johnsonii FI9785] Length = 275 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 89/305 (29%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL+SWNI++L+ + + R+ + K DADI+ +QE + Sbjct: 1 MRLISWNIDSLNAALTSDSPRAQLTRS------VLNTIKEKDADIIAIQETKLRSTGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + S + + KN + + P +GA D+ G Sbjct: 55 KHQEVLAEMFPNYDYVWRSSEEPARKGYAGTMFLYKNTLTPEVTKPAIGAPDTMDYEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V ++ + ++ Q L + Sbjct: 114 -----ILTLEFDNYYVTQVYTPNSGNELKRLEDRQIWDEKYTEYLQKL--------DKSK 160 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + +GD+N + + + F K + Sbjct: 161 PVIASGDYNVAHTPIDLKHPENNHHNAGFTDEERQDFDKLLKLGFTDTFRKVHGNIEGVY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY+++ + + + + DHCPI Sbjct: 221 SWWAQRVRTSKANNSGWRIDYYIVSDRIADQVTKSEMIDTGDRK-----------DHCPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 MLEIN 274 >gi|223996013|ref|XP_002287680.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220976796|gb|EED95123.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 453 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 84/295 (28%), Gaps = 45/295 (15%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + A + +VSWNI S + L N R+ L+R D++ LQE N Sbjct: 31 TNALSLSVVSWNI---SSAQPSQLAPNIALRSQRAPGLIRDECIRSLPDVIALQETSHPN 87 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 +F + + A V L + Sbjct: 88 QGTDMFG------------TGSTGYSYVSIGTQVA---HHTAEYVDLLVKRELYSHCQTI 132 Query: 139 RAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 N AV + NG +I V +HL + + + + I Sbjct: 133 NLQNLPAVAATINLPNGTRIAVASLHLPHTS----------QAAPERKRMCEAIMKGIVS 182 Query: 198 KKESLVPFVIAGDFNRKINYLGNND--------DFWKTIDPNDSLIRFPKEKDSRCNANK 249 + + ++ GDFN + + D WK + +D F Sbjct: 183 QVGNN--IILLGDFNMRKAEDKPTEGLVGGGWMDAWKVVTNSDKSRNFTWNSHDNLYHGP 240 Query: 250 -NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 N + D + + ++ +G LSDH +++ D Sbjct: 241 DNFQFTCRFDRCYARGAKLALREFQLI-----GNNTVEGKGDYLSDHFGLAVRLD 290 >gi|217972246|ref|YP_002356997.1| endonuclease/exonuclease/phosphatase [Shewanella baltica OS223] gi|217497381|gb|ACK45574.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS223] Length = 408 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 44/376 (11%), Positives = 91/376 (24%), Gaps = 98/376 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +++ S N+ E S + L ++ + DIV QE+ S + Sbjct: 30 IKIASINLFNFIEPPLAYYDFENIYSHGQWQKKCQWLSEFLAHRQPDIVGFQEVFSPEPL 89 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137 ++ + + ++ A+A R V + + S Sbjct: 90 KRIASEQG-LVHFAVIDAPTLISDYIYRSPVVALASRYPIVEISSVEPDARLVAAMGLSS 148 Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENT-------------------- 176 A +R+ + VE+ K +H KS +LE Sbjct: 149 EFAFSRKVLRATVEVPHIGKCDFYVVHFKSKRAGLALEPKLFEHQPLEPKRFENQPLGFD 208 Query: 177 -----------------------YSPSCSLLSQQAQWL-KDWITQKKESLVPFVIAGDFN 212 S +A L + +++ S P ++ GDFN Sbjct: 209 NSAPAASMKLHSETQLLTEQALGRWASTIQRGAEAALLFNGILVRRQASKHPVIVMGDFN 268 Query: 213 R---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN----------- 246 ++ + F + + Sbjct: 269 DSLTMGALDALTIQGESLHSNDIKAAGLGHLSDAALAAVFAQYQLKDAYELFIEANLRDS 328 Query: 247 --------------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------ 286 + +DY ++ + + Y D Sbjct: 329 LTGNTAYHREHRAATHYYGPKGSVLDYILLSSEFDASHGRSLAQVVDYQTCDRHLVRPEY 388 Query: 287 SRGKRLSDHCPISIDY 302 R +DH P+ ++ Sbjct: 389 ERDAYSTDHAPVIVEL 404 >gi|312884597|ref|ZP_07744301.1| hypothetical protein VIBC2010_15519 [Vibrio caribbenthicus ATCC BAA-2122] gi|309367909|gb|EFP95457.1| hypothetical protein VIBC2010_15519 [Vibrio caribbenthicus ATCC BAA-2122] Length = 457 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 39/291 (13%), Positives = 83/291 (28%), Gaps = 34/291 (11%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 T + +R+ ++N+ + + T+L D++ LQE S Sbjct: 179 TEAREHALRIATYNLWM---------IPSVSLDISERATILDHTLSGY--DVLTLQEAFS 227 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +F + F + DS + + + S + Sbjct: 228 -SDRDALFDALSGEYF----YRTDVVGGDSMALYDGGVVTLSRYPILETDSIVFEHCSGT 282 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 A + V ++ G+ + + HL SF + L + +T Sbjct: 283 DCYAD-KGIVYTKIDKLGQIYHIFNTHLASFSTPAAKRLRRLQLGLLRTF-------MLT 334 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI- 255 ++ + AGDFN N D + +D+ + N + Sbjct: 335 KEIPQDEAVIFAGDFNIDKNNDFLEYLLMLATLEVDP-PLYTGYRDATFDPRINPYAQSQ 393 Query: 256 --------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +DY ++ + + ++ LSDH + Sbjct: 394 YSGGDTIEYLDYILVSSEHKRARQNINQVKLNQRVTAATWGEWHLSDHFGV 444 >gi|228906140|ref|ZP_04070029.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 200] gi|228853549|gb|EEM98317.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 200] Length = 263 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 35/269 (13%), Positives = 72/269 (26%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 18 EKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGLLLLEELKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ + + ++ + +D+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK-TRKIVSTTIAYNGKDITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKGQVDRLMERVD----SNKLAFLMGDFNNNARLEG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + ID + +Q S Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGVIAGWDENKHNLRIDLILCNQ---------S 233 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +SDH + + D Sbjct: 234 KKVHSSKVVFNGTNRNVISDHFGVEVQLD 262 >gi|194221192|ref|XP_001490024.2| PREDICTED: phosphodiesterase 12 [Equus caballus] Length = 609 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 39/314 (12%), Positives = 79/314 (25%), Gaps = 33/314 (10%) Query: 24 VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R VS+NI S L+++ +AD++ LQE+ Sbjct: 295 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDR 354 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + P R+ H + ++ + L + Sbjct: 355 NVFTDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFHEALESDPLHKEL 414 Query: 136 SFSRAGNRRAVELLVEINGK-KIWVLDIHLKSF---CFLDSLENTYSPSCSLLSQQAQ-- 189 A E +++ + ++ VL S C ++ + + Q Sbjct: 415 LEKLVLYPSAQERVLQRSSVLQVSVLQSRQDSSKKICVANTHLYWHPKGGYIRLIQMAVA 474 Query: 190 -WLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPNDSLIR 236 ++ +P + GDFN + + D + ++ Sbjct: 475 LAHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEERCNMSL 534 Query: 237 FPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGK 290 K N +DY +D + S Sbjct: 535 AHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQALPSVS 594 Query: 291 RLSDHCPISIDYDF 304 SDH + D + Sbjct: 595 HPSDHIALVCDLKW 608 >gi|21231446|ref|NP_637363.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768500|ref|YP_243262.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. 8004] gi|21113117|gb|AAM41287.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573832|gb|AAY49242.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. 8004] Length = 356 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 34/302 (11%), Positives = 69/302 (22%), Gaps = 70/302 (23%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 + ++N+N ++ L Q+ + DIV LQE+ S Sbjct: 7 TIATYNVNGIAS----------------RLPHLLQWLQREQPDIVGLQELKSTQEA---- 46 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 R + +A+ + ++ L Sbjct: 47 ------FPEQAIRDAGYGVIWQGQRSWNGVALLARGAEPVEIRRGLPWDPADTQSRYLEA 100 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 A+ ++ V ++L + + Y + Q L P Sbjct: 101 AIHGVI--------VGCLYLPNGNPQPGPKFDYK------LKWFQRLLRHAATLVALPHP 146 Query: 205 FVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + GDFN + + + Sbjct: 147 VALIGDFNVVPTDAHIYDPKGWRKDALLQPESRAAYAQLLAQGWTDSLQAIHGDAPVYTF 206 Query: 250 NLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + ID+ ++++ L ++ SDH P I Sbjct: 207 WDYFRQHFARDRGLRIDHLLLNRTLAAGLRDAGVG-------KWVRALEKASDHAPTWIT 259 Query: 302 YD 303 D Sbjct: 260 VD 261 >gi|306824688|ref|ZP_07458032.1| exodeoxyribonuclease III [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432899|gb|EFM35871.1| exodeoxyribonuclease III [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 275 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 77/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLS------QEVLQILVAENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K S+P +GA S R Sbjct: 55 KHLEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDLEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +V ++ + ++ L + Sbjct: 114 I-----ITLEFDTFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAQL--------DKEK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVSDKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 VLEIE 274 >gi|315042279|ref|XP_003170516.1| endonuclease/exonuclease/phosphatase [Arthroderma gypseum CBS 118893] gi|311345550|gb|EFR04753.1| endonuclease/exonuclease/phosphatase [Arthroderma gypseum CBS 118893] Length = 294 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 78/294 (26%), Gaps = 22/294 (7%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD-IVFLQEMGSYNAVAK 82 R+++ NI + + + R L Y L+ + V LQE Sbjct: 8 FRILTHNIRY-ATTSPSTGEQPWSVRAPHIVNEL-DYHSRLNPESFVCLQEALHNQVTDV 65 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNND------IHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + N+ S + + ++ I R ++ ++ L S Sbjct: 66 LAGLNSRPHASSQGDDGKWAFYGVGRNDGKQAGEYSPIFYRPAVWKLQEKETVWLSETPS 125 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 G A +V I V + + L + + A+ + I Sbjct: 126 VPSKGWDAASIRIVTIG-----VFNHLATNTTLLAMNTHLDDQGSKSRHESAKLILSLIG 180 Query: 197 QKKESLVPF---VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP----KEKDSRCNANK 249 + +AGDFN + D+ R P + Sbjct: 181 KYLARHPEIKGNFLAGDFNSDEGQEAYREFTKPGSSIVDTYKRVPASQRYGDEITFTGFD 240 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY ++ + I + + + SDH + D Sbjct: 241 GKTQGSRIDYVMVGPQSSSSAIPFTVN-GYAVMPNRFENRIYNSDHRAVVADVT 293 >gi|222082743|ref|YP_002542108.1| endonuclease/exonuclease/phosphatase protein [Agrobacterium radiobacter K84] gi|221727422|gb|ACM30511.1| endonuclease/exonuclease/phosphatase protein [Agrobacterium radiobacter K84] Length = 279 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 36/281 (12%), Positives = 80/281 (28%), Gaps = 55/281 (19%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + S+N++ + D + + +DAD++ LQE + Sbjct: 38 IASYNVHKCVGADRRF-----------DPERISRVIHEIDADVIGLQEADTRFGERTGL- 85 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + T + S V K V L R A Sbjct: 86 LDLRRLERETGLIPVPVAGASKAHGWHGNVVLFKQGTVRDVHQISLPG------LEPRGA 139 Query: 146 VELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + +E G + ++ HL +QQA+ + + +++ ++ P Sbjct: 140 LLAEIELARGGVLRIIAAHLGLL-------------LRSRAQQARLIVELMSR--DNDTP 184 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 ++ GD N + ++ + + + +D + ++ Sbjct: 185 TILLGDLN---------EWRLGDRSSLNTFQAAFGPLPPAVPSFPSTLPLLALDRIMANR 235 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI--SIDYD 303 + I E + SDH PI + + Sbjct: 236 SGL----------ISTVEVHDSPLARVASDHLPIKAVVSLE 266 >gi|84500561|ref|ZP_00998810.1| hypothetical protein OB2597_11401 [Oceanicola batsensis HTCC2597] gi|84391514|gb|EAQ03846.1| hypothetical protein OB2597_11401 [Oceanicola batsensis HTCC2597] Length = 266 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 33/282 (11%), Positives = 75/282 (26%), Gaps = 51/282 (18%) Query: 47 VKRTTSDYTLLRQYAKNLDADIVFLQE------------------------MGSYNAVAK 82 + + + + DI+ LQE V++ Sbjct: 7 NAWGGRLFEEMVAWIAEVQPDILCLQETVFAPGSPSAWLDYRDGDTVLPQRADVLRDVSR 66 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS---YPLLGAKDSFSR 139 P + + + R+ + A + + V Q + Sbjct: 67 ALPDHGMSFCPAACGNLWLGNREVPSLWGLATFLHPDLMIVGQSQGFVHGAFSPDGFGDH 126 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 +R A + V + + + + + + +QA+ + Sbjct: 127 PRSRTAHVVRVWHPDEG--GITVGHMHGLRDPNGKMDT----PVRGEQARKFATMVQSVL 180 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 + P V GDFN + ++ + + + + + DY Sbjct: 181 QPGDPVVACGDFNVLPGS-----ETFRVMARVAPYNLVTQRGFDGTRTSHYEKPERWADY 235 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 +++ +F I E +SDHCP+ +D Sbjct: 236 MLVNGPLKD----AAFDVIRTPE---------ISDHCPLVLD 264 >gi|222823091|ref|YP_002574664.1| exodeoxyribonuclease III [Campylobacter lari RM2100] gi|222538312|gb|ACM63413.1| exodeoxyribonuclease III [Campylobacter lari RM2100] Length = 252 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 76/304 (25%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + + + D + QE+ A + Sbjct: 1 MKLLSWNVNGLRAICDKNA---------------LDWIEKENIDFIGFQEI---KAHEEK 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FPK + + + + ++ + + F R Sbjct: 43 FPKRIYEYDFKHMYFNSAKRA-----GYSGVMSLLNF-------DCETKKCEFFDDDEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++E K I + +I+ + + + + L Sbjct: 91 -----VLEHRFKNIALFNIYFPNGQKDEERLSFKMKFYNDFLVYLDKLLK-------EGK 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GD N L + + + F Sbjct: 139 EIIICGDVNTAHREIDLTHPKANEKTSGFLPIERAWIDDLLELGFVDTFRYVNGDIKEKY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + L + ++ SDH P+ Sbjct: 199 SWWSYRMKARERNVGWRIDYFFISNGLKDKLKNAFIRDDIF-----------GSDHAPVG 247 Query: 300 IDYD 303 I+ D Sbjct: 248 IEID 251 >gi|288905926|ref|YP_003431148.1| 3'-exo-deoxyribonuclease [Streptococcus gallolyticus UCN34] gi|306831945|ref|ZP_07465100.1| exodeoxyribonuclease III [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978892|ref|YP_004288608.1| exodeoxyribonuclease III [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732652|emb|CBI14224.1| putative 3'-exo-deoxyribonuclease [Streptococcus gallolyticus UCN34] gi|304425871|gb|EFM28988.1| exodeoxyribonuclease III [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178820|emb|CBZ48864.1| exodeoxyribonuclease III [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 275 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 81/305 (26%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + R + +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAVMSR------AVIDTLVTENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + S + + K+ SYP +GA D+ G Sbjct: 55 KHLQILQDYFPEYEVSWRSSVEPARKGYAGTMFLYKSSLTPSISYPEIGAPDTMDSEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + K +V ++ + + L Sbjct: 114 -----IITLEFDKFFVTQVYTPNAGDGLKRLAERQIWDEKYADYLAELDQV--------K 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F + Sbjct: 161 PVLATGDYNVAHKEIDLAHPSSNRRSPGFTDEERAGFTNLLAKGFTDTFRYIHGDIPDVY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 SWWAQRSKTSKINNSGWRIDYWLTSSRIADKITKSEMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 VLEID 274 >gi|283780185|ref|YP_003370940.1| endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068] gi|283438638|gb|ADB17080.1| Endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068] Length = 325 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 31/293 (10%), Positives = 84/293 (28%), Gaps = 38/293 (12%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +R+ ++NI E + ++ + + D++ +QE+ Sbjct: 45 APPPRLDATIRVATFNIQVFGED---------KMADPAAMGVIVEILRQF--DVIAIQEI 93 Query: 75 GS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLL 131 + + + ++ + + I +S + A R Q Y + Sbjct: 94 RAVRQDLMPRLVELINAGGKHQYDYCIGPRLGNSVSKEQYAFVFDRTSIEVDRNQLYTVD 153 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + R K +++ + + E + Sbjct: 154 DPDNLLHREPLVGWFRCRAAEPDKAFTFSLVNVHTDPDIVDYELD----------WLDDV 203 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 + + ++ GDFN ND + + SL++ + N Sbjct: 204 FFAVRDDQRREDDVIMLGDFNV-------NDKNLRQLGSVPSLVKVVAGVPTNTRGN--- 253 Query: 252 RNKIPIDYF-VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + +F + + + + + + ++SDH P+ ++ Sbjct: 254 ---AQYDNILFAGTSTTEFTGRGGVYDFMREFNLTQEQALQVSDHLPVWAEFS 303 >gi|21220603|ref|NP_626382.1| hypothetical protein SCO2125 [Streptomyces coelicolor A3(2)] gi|256788258|ref|ZP_05526689.1| hypothetical protein SlivT_27549 [Streptomyces lividans TK24] gi|289772150|ref|ZP_06531528.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|5689935|emb|CAB51973.1| hypothetical protein [Streptomyces coelicolor A3(2)] gi|289702349|gb|EFD69778.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 253 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 47/294 (15%), Positives = 72/294 (24%), Gaps = 57/294 (19%) Query: 13 LVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 +P + + +R++S+NI +L D L + K D+V Sbjct: 7 ALPNSRTEPDGSAVIRVLSYNIRSL----------------RDDTDALARVIKACAPDLV 50 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-NVRVLQQSY 128 LQE W + S A+ V + Sbjct: 51 LLQEAP---------RFFRWRKKITRLAAAGDLVLLSGGGTAAGPALLCSLRATVERTED 101 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 LL R R +V I G +I VL HL S +QA Sbjct: 102 VLLPLTPGRHR---RGIAAAVVRIGGARIGVLSSHL-------------SLDADERHEQA 145 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 L D + V GD N + + Sbjct: 146 GLLLDHLAALGVKHA--VAGGDLNERPGGRTFRRL------GEGLRDCWTAAPWGGEYTF 197 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID + + EDD+ + +DH P+ Sbjct: 198 PATAPDRRIDAVFVTEGIEVLGCGVPSGLAGVAEDDL----RAATDHLPVLTAL 247 >gi|325185938|emb|CCA20442.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 452 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 47/351 (13%), Positives = 96/351 (27%), Gaps = 75/351 (21%) Query: 22 QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YN 78 +K+ +V +NI L+ Q S + +L + + LDADI+ L+E+ + Sbjct: 103 KKITIVQFNILARNLASQTHFPYVIESRLTWDNRKQILLRQLEGLDADILCLEELSDYWT 162 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + Y I+ S I +K + + +F Sbjct: 163 FFKSELGERGYDSVYVKRPSIHVSNWSGEKKQDGCGIFFKKDKFELKE------CESINF 216 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 +R A+ L++ + + + + + + ++ L + Sbjct: 217 HDTHDRVAILALLQ-SKQFAQLFLVGCTHLWWNSKKVDHQMAELYEFEEEVIRLCSDMKD 275 Query: 198 KK----------ESLVPFVIAGDFNRKINYLGNN------------DDFWKTIDPNDSLI 235 K P ++ GDFN + + + Sbjct: 276 KYQQEIRSSITGGPNFPVILCGDFNNTPQSAIYDHMHNSFLQRPNMEGIREEFRSAYRYY 335 Query: 236 RFPKEKDS---------------RCNANKNLRNKIPIDYFVMDQN--------------- 265 R + S + N R IDY + Sbjct: 336 RLNEMAQSSSVSSMKEEIVGEFEPPHTTVNYRRCWTIDYIWYSSSNLVPCRILEIPSEAV 395 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKR------------LSDHCPISIDYDF 304 + E L + D + G++ SDH P+ + +F Sbjct: 396 LRAEEGPPGWFERLAHLDTFQKSGRKQGSQNGIPNSKCGSDHIPLFAELEF 446 >gi|226948935|ref|YP_002804026.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A2 str. Kyoto] gi|226842849|gb|ACO85515.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A2 str. Kyoto] Length = 263 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 36/297 (12%), Positives = 89/297 (29%), Gaps = 52/297 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++++ N + ++ L + + D++ LQE+ + Sbjct: 1 MKILTLNCH-----------SWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKIL 49 Query: 84 FPKNTWCIFY------------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 F F + +++ + +A+ K+ ++S+ + Sbjct: 50 FDNIKEDNFAFILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHPIKEKKSFYIS 109 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 +KD R+ ++ ++ N I+ HL + D E+ L Q L Sbjct: 110 KSKDKNFWK-TRKIIKCKIDYNNNPIYFYSCHL--GWWDDEEED--------LKSQVNKL 158 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----N 246 + ++ GD+N D+ D + + + Sbjct: 159 VQELK----EKETCILMGDYNNDAFLNNKGYDYLINKKLKDIYHLARSKDNGVTAIGDID 214 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K + +D + ++N + F+ I +SDH + + Sbjct: 215 GWKGNTKDMRLDLILSNKNLKVEYCKVIFNGIRKEI---------ISDHFGVEAKIE 262 >gi|241950641|ref|XP_002418043.1| endonuclease/exonuclease/phosphatase, putative [Candida dubliniensis CD36] gi|223641382|emb|CAX43342.1| endonuclease/exonuclease/phosphatase, putative [Candida dubliniensis CD36] Length = 303 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 89/311 (28%), Gaps = 19/311 (6%) Query: 1 MIRKYVLALV---FFLVPCTASV-AQKVRLVSWNINTLSEQEGVSLWK-NSVKRTTSDYT 55 M+ + + + ++ + + A + + S N+ + + G + R Sbjct: 1 MLGRILFIIFHWTLLVLADSETSDALDITIYSNNVRYAASRRGRGRDELPWKTRKHGVVD 60 Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND--IHTA 113 ++ + +V LQE+ + N RD + ++ Sbjct: 61 AIKAQ-SGVYPILVGLQEVTHTQLKDILKGLNKKHSGDDGRWTHFGVGRDDGHKKGEYSP 119 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 I +L +Y L A + + G V + +F Sbjct: 120 IIYNTAEWNLLNGTYKWLSLTPDKPSKYP-GASKKRIVTMGTFFHVKSGKVVNFVNTHLD 178 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 S A+ + +I + P + GDFN ++ + Sbjct: 179 H----RSVKSREYSAKLIIQYIKS-IPNYFPTFLCGDFN-SLDTDKAYATISHYMVDASH 232 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE-DDIKSRGKRL 292 + + + + + ID+ + + + Y D++ G R Sbjct: 233 VAEKKYDTNLKTFSGFGNGTSYSIDFIW---SPLDTNNHSGINALFYTVLDNLFDGGYRF 289 Query: 293 SDHCPISIDYD 303 SDH PI Y Sbjct: 290 SDHRPIMARYS 300 >gi|21553771|gb|AAM62864.1| unknown [Arabidopsis thaliana] Length = 426 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 34/297 (11%), Positives = 85/297 (28%), Gaps = 47/297 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+N+ E ++L + + ++ QE+ + + Sbjct: 158 LKILSYNV-WFREDLELNL----------RMRAIGHLIQLHSPHLICFQEVTPE--IYDI 204 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F K+ W YS + + + + +S+ + R Sbjct: 205 FRKSNWWKAYS---CSVSVDVAVSRGYYCMLLSKLGVKSFSSKSF--------GNSIMGR 253 Query: 144 RAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 VE+ G K + HL+S C +QA+ + + Sbjct: 254 ELSIAEVEVPGRKPLVFATSHLESPCPGPPKW--DQMFSRERVEQAKEAIEILR----PN 307 Query: 203 VPFVIAGDFNR----KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + GD N + + + F + + + N + +D Sbjct: 308 ANVIFGGDMNWCDKLDGKFPLPDKWVDVWEVLKPGDLGFTYDTKANPMLSGNRALQKRLD 367 Query: 259 YFVMDQN-----AYKFLIQESFSEILYNEDDIKSRGKR-------LSDHCPISIDYD 303 + + + + +E+ + Y ++ + SDH + + Sbjct: 368 RILCRLDDYKLGGIEMVGKEAIPGLSYVKEKKVRGDIKKLELPVLPSDHFGLLVTLS 424 >gi|30682419|ref|NP_563894.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] gi|4835775|gb|AAD30241.1|AC007296_2 EST gb|F14156 comes from this gene [Arabidopsis thaliana] gi|22135816|gb|AAM91094.1| At1g11800/F25C20_3 [Arabidopsis thaliana] gi|23308397|gb|AAN18168.1| At1g11800/F25C20_3 [Arabidopsis thaliana] gi|332190667|gb|AEE28788.1| endonuclease/exonuclease/phosphatase-like protein [Arabidopsis thaliana] Length = 441 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 34/297 (11%), Positives = 85/297 (28%), Gaps = 47/297 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+N+ E ++L + + ++ QE+ + + Sbjct: 173 LKILSYNV-WFREDLELNL----------RMRAIGHLIQLHSPHLICFQEVTPE--IYDI 219 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F K+ W YS + + + + +S+ + R Sbjct: 220 FRKSNWWKAYS---CSVSVDVAVSRGYYCMLLSKLGVKSFSSKSF--------GNSIMGR 268 Query: 144 RAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 VE+ G K + HL+S C +QA+ + + Sbjct: 269 ELSIAEVEVPGRKPLVFATSHLESPCPGPPKW--DQMFSRERVEQAKEAIEILR----PN 322 Query: 203 VPFVIAGDFNR----KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + GD N + + + F + + + N + +D Sbjct: 323 ANVIFGGDMNWCDKLDGKFPLPDKWVDVWEVLKPGDLGFTYDTKANPMLSGNRALQKRLD 382 Query: 259 YFVMDQN-----AYKFLIQESFSEILYNEDDIKSRGKR-------LSDHCPISIDYD 303 + + + + +E+ + Y ++ + SDH + + Sbjct: 383 RILCRLDDYKLGGIEMVGKEAIPGLSYVKEKKVRGDIKKLELPVLPSDHFGLLVTLS 439 >gi|291393887|ref|XP_002713308.1| PREDICTED: 2,5-phosphodiesterase 12-like [Oryctolagus cuniculus] Length = 610 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 39/316 (12%), Positives = 78/316 (24%), Gaps = 37/316 (11%) Query: 24 VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R VS+NI S L+++ +AD++ LQE+ Sbjct: 296 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDR 355 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + P R+ H + + ++ ++ ++ Sbjct: 356 AVFADSLVPALEAFGLEGVFRIKQHEGLATFYR-RSKFSLLSQHDIAFHEALQSDPLHKE 414 Query: 137 FSRAGNRRAVELL-VEINGKKIWVLDIHLKSF-----CFLDSLENTYSPSCSLLSQQAQ- 189 + V + V + C ++ + + Q Sbjct: 415 LLEKLAVYPLAQEKVLQRSSVLQVSVLQSTKDSSKKICVANTHLYWHPKGGYIRLIQMAV 474 Query: 190 --WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 ++ + +P + GDFN G P D ++ RCN Sbjct: 475 ALAHIRHVSCDLYAGIPVIFCGDFNSTP-SAGMYHFVINGNVPEDHEDWTSNGEEERCNM 533 Query: 248 NKNLRNK------------------IPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSR 288 + K +DY +D + S Sbjct: 534 SLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQALPS 593 Query: 289 GKRLSDHCPISIDYDF 304 SDH + D + Sbjct: 594 VSHPSDHIALVCDLKW 609 >gi|257889202|ref|ZP_05668855.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium 1,141,733] gi|257825274|gb|EEV52188.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium 1,141,733] Length = 274 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 36/310 (11%), Positives = 83/310 (26%), Gaps = 66/310 (21%) Query: 24 VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++++ N + L E+ + Q + D++ LQE+ + Sbjct: 1 MKIMTLNTHSWLEEEP------------REKLKQIAQKICHEQYDVIALQEVNQTMDAKR 48 Query: 83 V----------------FPKNTWCIFY--------STERLINHSKRDSNNDIHTAIAVRK 118 + + + T A+ Sbjct: 49 LTSEQLKNFSQVQEQTPVRSDNFAYCLIQLLAEQGETYYWSWEMSHIGYAIYEEGNALLS 108 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K + L+ R+ + + + I V H + S Sbjct: 109 KQPLI--SQTHLVSETKEKEDYHTRKILVGQTSVKSQCITVASCHFSWWADEKSG----- 161 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + + L+ + P + GDFN G + + D+ Sbjct: 162 -----FAFEWKELEASL---APLTTPLYLLGDFNNPAEGSGYDLVAKSQLPIRDAYPIAQ 213 Query: 239 KEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 K++ + +N + + IDY + Q+ + Y G +S Sbjct: 214 KKQAEATIEKRIDGWENNKEGLRIDYIYVPQDCF---------VTSYQRIFDGENGPIVS 264 Query: 294 DHCPISIDYD 303 DH +++ + Sbjct: 265 DHYGVAVTLE 274 >gi|116193731|ref|XP_001222678.1| hypothetical protein CHGG_06583 [Chaetomium globosum CBS 148.51] gi|88182496|gb|EAQ89964.1| hypothetical protein CHGG_06583 [Chaetomium globosum CBS 148.51] Length = 646 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 40/339 (11%), Positives = 80/339 (23%), Gaps = 79/339 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80 +R+ +WN + ++ R + T L+ L+ADIV +QE + + Sbjct: 2 PLRITTWN----------GITAVTLPRARTKLTSLQAMFDTLEADIVVMQETKIQRKDLR 51 Query: 81 AKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKN-------VRVLQQSYPLLG 132 + W +F+S + +S +R + + L Sbjct: 52 DDMVLVPGWDVFFSLPKYKKGYSGVAIYTRSSKCCPIRAEEGITGTLCPPNSSTKFQHLP 111 Query: 133 AKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA-- 188 + V+ + + + +F + +QA Sbjct: 112 VDQQIGGYPTPGQLSDYVDEPTLDSEGRCVILEFPAFVLIGVYSPATRDETRDEFRQAYI 171 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF----------- 237 + + + GD N + + +L F Sbjct: 172 NAIDVRVRNLVAMGKQVFLCGDLNIIRSEQDTAGLAERLRKEEMTLDDFFSTPSRCFLNH 231 Query: 238 -----------------------------PKEKDSRCNANKNL----RNKIPIDYFVMDQ 264 + C + IDY + Sbjct: 232 IVFGGHVAGEREEGREEPVLWDLCREFHPTRPGMYTCWDTRKNARPGNFGSRIDYVLCSS 291 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + I + G SDHCP+ D Sbjct: 292 GIKDWFIDSNIQ-----------EGLLGSDHCPVYATID 319 >gi|119776098|ref|YP_928838.1| hypothetical protein Sama_2966 [Shewanella amazonensis SB2B] gi|119768598|gb|ABM01169.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 394 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 92/354 (25%), Gaps = 78/354 (22%) Query: 26 LVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + + N+ + + ++ LR +L+ADI+ QE+ S + + Sbjct: 41 IATLNLFNFLAPPAAAYEFDRIYSNEQWQKKCNWLRHCVSSLEADIIGFQEVFSVDELKA 100 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN---VRVLQQSYPLLGAKDSFSR 139 + + + F + AIA R V V L Sbjct: 101 LMLELGYPHFAVVDEPGCEDYVC--RAPVVAIASRLPLLEVVAVEPDPAALAAMDLKADF 158 Query: 140 AGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA-------- 188 RR + V +N I+VL + F + LL+ +A Sbjct: 159 RFGRRVLRATVNLNDWGMLDIYVLHFKSQRPLFEPEALGDMQAAPRLLAHRALGSFASSA 218 Query: 189 -------QWLKDWITQKKESLVPFVIAGDFNRKINYLG---------------------- 219 + I ++ E+ P VI GDFN ++ Sbjct: 219 RRGFEAMLLYQAMIMRRDETAHPMVIMGDFNSGLDAAEFRGFWLGADAIHGNDKQAAGLG 278 Query: 220 ------------------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 F + + +R + Sbjct: 279 GLSEQAFANAISHFTLKDASVLFLEGQLFDRQSGGHHGTDSTEDLSWARRPTHYLGSRGS 338 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKRLSDHCPISIDYD 303 +D+ ++ Q+ L ++ D R SDH + + + Sbjct: 339 LLDHILLSQDFDGALAPARGRVCHFSVFDEHLRSPKYERDSESSDHAALVVGLE 392 >gi|325273997|ref|ZP_08140156.1| endonuclease/exonuclease/phosphatase [Pseudomonas sp. TJI-51] gi|324100886|gb|EGB98573.1| endonuclease/exonuclease/phosphatase [Pseudomonas sp. TJI-51] Length = 284 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 37/292 (12%), Positives = 83/292 (28%), Gaps = 58/292 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 ++RL+S+NI E + + + + + D D+V L Sbjct: 28 PDDGRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHNGRAGNLQKIGKLLS--DFDLVAL 85 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE + + + R+ + V + L + +PL Sbjct: 86 QEADGGSLRSGFVNQVEHLAQLGAFPYWYQQLNRNLGRFAQHSNGVLSRLKPQLLEDHPL 145 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G R A+ + + V+ +HL + Q + Sbjct: 146 PGPAG-------RGAILVRFGEGEDALIVVMMHLALG-------------AKTRALQLGY 185 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 +++ I V+ GD N L + + + + + Sbjct: 186 IRELIGGY----RHQVLMGDMNTHAADLLEHSPL-RDLGLVAPQVEAT---------FPS 231 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R + +D+ ++ + ++ I SDH P++++ Sbjct: 232 WRPQRCLDHILLSSSLTLERVEVLAQPI--------------SDHLPVAVEI 269 >gi|311745078|ref|ZP_07718863.1| exodeoxyribonuclease III [Algoriphagus sp. PR1] gi|311302328|gb|EAZ81811.2| exodeoxyribonuclease III [Algoriphagus sp. PR1] Length = 253 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 86/305 (28%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81 +++VS+N+N + + K D +++ LQE+ + Sbjct: 1 MKIVSYNVNGIRAAMNKGF---------------LDWLKQTDPEVIGLQEVKAMEDQIDT 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +F + +++ + + + +A+ K L D R Sbjct: 46 SIFKDLGYKVYWYPAQKKGY----------SGVAILSKITPKSIHHGMGLQKYDDEGRL- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +EI + L + S D + + + + +I + + Sbjct: 95 --------LEIEFEDFSFLSAYFPSGTTGDIRQ-------TFKYEFLDDIYGYIKDLRRT 139 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNA 247 +++GD+N + ++ I + + + Sbjct: 140 KPNLILSGDYNICHKAIDIHNPVSNKNSSGFLPEERVWMDKFTESGFIDTFRHFNPEPHQ 199 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY + ++ L + + SDHCPI Sbjct: 200 YTWWSYRANARAKNLGWRIDYHMATKDMENRLKRSVIL-----------PEAKHSDHCPI 248 Query: 299 SIDYD 303 ++ + Sbjct: 249 LVELN 253 >gi|158522531|ref|YP_001530401.1| endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans Hxd3] gi|158511357|gb|ABW68324.1| Endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans Hxd3] Length = 232 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 41/281 (14%), Positives = 81/281 (28%), Gaps = 55/281 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L ++NI+ +G D LDADI+ LQE+ + + Sbjct: 7 LKLATYNIHGSVGTDGRF-----------DPARTMAVINQLDADIIALQEVST---IRSD 52 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + T + + H V ++ + L SF + R Sbjct: 53 LREWVSGFQAETGMRVIPGMTMFRDAAHYGNVVLTRDAVEHVEHINL-----SFKQREPR 107 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A+ L + ++ ++I ++ HL + Q + L + + Sbjct: 108 GAICLTLSVDDRRICIVATHLGLR-------------AAERRAQVKLLLKVLER--RPAD 152 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 FV+ GD N I + + F + +D ++ Sbjct: 153 IFVLMGDLNEWIAGARSLRQARR---------FFDHIHTPSTFPARFPLLS--LDRILV- 200 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + K SDH P+ + F Sbjct: 201 -----WPATCLHTIAPLKNPLTK----IASDHLPLRAEIVF 232 >gi|86151219|ref|ZP_01069434.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 260.94] gi|315123837|ref|YP_004065841.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841566|gb|EAQ58813.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 260.94] gi|315017559|gb|ADT65652.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 252 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 79/304 (25%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + D + QE+ A Sbjct: 1 MKLLSWNVNGLRAICDKNA---------------LDWIAQEKIDFIGFQEI---KAHEDK 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FPK + + + + ++ + +++ + F+ R Sbjct: 43 FPKKIYEYPFKHMYFNSAKRA-----GYSGVMSLCNFDSEVKK-------CEFFNDEEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++E K I + +I+ + + N + L Sbjct: 91 -----VLEHRFKNIALFNIYFPNGQKDEERLNFKMKFYADFLVYLDKLLK-------DGF 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GD N L + + + F + Sbjct: 139 EIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + L + ++ SDH PI Sbjct: 199 SWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFIRDDIF-----------GSDHAPIG 247 Query: 300 IDYD 303 I+ D Sbjct: 248 IEID 251 >gi|328541790|ref|YP_004301899.1| endonuclease/exonuclease/phosphatase family [polymorphum gilvum SL003B-26A1] gi|326411542|gb|ADZ68605.1| Endonuclease/exonuclease/phosphatase family [Polymorphum gilvum SL003B-26A1] Length = 323 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 41/331 (12%), Positives = 95/331 (28%), Gaps = 60/331 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY------ 77 +RL ++N+ + E + + LR L AD++ LQE+ + Sbjct: 1 MRLATFNLESFGEDD------FDAEALQPRLDALRPTLLALKADVLCLQEVNAQRLERKG 54 Query: 78 ----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 A+ + + F+ L + +AV + V ++ Sbjct: 55 TRVFAALDALVAGTPYEDFFRATSLRPDG---TAPADKHNLAVLSRFPVVSSRTIREDHV 111 Query: 134 KDSFSRA--------------GNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYS 178 + R +R + +++ + + V +HL++ S Sbjct: 112 EPPLWRPRSADPLPAGPEPVGFDRPLLHAALDVGLPRPLHVFCVHLRAPIAAPVAGGKLS 171 Query: 179 P---------------SCSLLSQQAQWLKDWITQKKESLVPFVI--AGDFNR-------K 214 + QA L+ I ++ +I AGDFN + Sbjct: 172 AVSWGSTAAWAEGYFLASMKRVGQALELRLAIDALFDADPEALIAAAGDFNAVGLESPLR 231 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 + +D + + R + +D+ ++ + Sbjct: 232 LVMADPDDTGNPALGHRRLRQLDAAVPEERRQTVVHRGRGHALDHILVSRELLFRARDIR 291 Query: 275 FSEILYNED--DIKSRGKRLSDHCPISIDYD 303 ++ D + + S H P+ ++ Sbjct: 292 VLNEGLADEVRDAGTPAEAGSFHAPVVATFE 322 >gi|194223065|ref|XP_001497667.2| PREDICTED: similar to TRAF and TNF receptor-associated protein, partial [Equus caballus] Length = 333 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 80/287 (27%), Gaps = 48/287 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++WNI+ L + Y D++FLQE+ Sbjct: 85 FSFITWNIDGLDPNN-----------LQERAQGVCSYLALYSPDVIFLQEV--------- 124 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + TAI ++K V+ Q R Sbjct: 125 --IPPYYSYLKKKASSYEIITGNEEGYFTAIMLKKSRVKFKSQEIIPFPDT-----KMMR 177 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V ++G +++++ HL+S Q + + I + Sbjct: 178 NLLCVHVSVSGNELFLMTSHLEST----------RGHAKERINQLKMVLKKIQE-APESA 226 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKIPI 257 + AGD N + + I + + + N K+ Sbjct: 227 TIIFAGDTNLRDQEVTKCGGLPNNILDVWEFLGKPKHCQYTWDTQMNSNLGIPATCKLRF 286 Query: 258 DYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D A +I S + + G+ SDH + + D Sbjct: 287 DRIFFRAAAGDGHIIPRSLDLLGL---EKLDCGRFPSDHWGLLCNLD 330 >gi|50551027|ref|XP_502987.1| YALI0D18458p [Yarrowia lipolytica] gi|49648855|emb|CAG81179.1| YALI0D18458p [Yarrowia lipolytica] Length = 454 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 88/308 (28%), Gaps = 49/308 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++VR+++ N L + K R + L Q DIV LQE+ + Sbjct: 49 KQVRVLTLNCWGL-----KLVSKLRPLRLEAISAQLAQ--DGDSYDIVCLQEVWVESDFD 101 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + A+ R + L G +F R Sbjct: 102 QI-----KKACVDHFPYTKYYYSGIIAGPGLAVLSRWPIESAYVHRFGLNGRPSAFFRGD 156 Query: 142 NRR----AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 A ++ + +I +L+ H+ + T + QA + + Sbjct: 157 WYVGKSVASATIIHPSNHRIEILNAHMHAPYGPGDANYT-----CHRTSQAWEMARIAKR 211 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-------------- 243 ++ ++ GD N + + L + + + R + Sbjct: 212 SMDAGNLTIVTGDLNSRPSSLTHQLFENMALLQDAWESRHGEFSGDLSEMTPEQQIEEAG 271 Query: 244 ---RCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 N ++ +DY D + + E D G +SDH Sbjct: 272 VTCNSRLNSWRASRPLSDACRLDYIFFDPSRA------TVREARVAFTDKIEGGCSVSDH 325 Query: 296 CPISIDYD 303 +S ++ Sbjct: 326 FGVSAVFE 333 >gi|317502601|ref|ZP_07960722.1| endonuclease/exonuclease/phosphatase family protein [Prevotella salivae DSM 15606] gi|315666282|gb|EFV05828.1| endonuclease/exonuclease/phosphatase family protein [Prevotella salivae DSM 15606] Length = 315 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 38/338 (11%), Positives = 88/338 (26%), Gaps = 57/338 (16%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKR 49 M+ ++ L+ ++ N L + + SL ++ + R Sbjct: 1 MLMHWLYLLLGVFTFV------EL-----NCENLFDTQHDSLKQDMEYLPESYHHWNKSR 49 Query: 50 TTSDYTLLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH 101 + + Q D+V L E+ + + V + ++ + + Sbjct: 50 YWNKLNHIGQSIIACGKHENKWLLPDLVALCEVENDSVVRDLTKRS-----LLRQARYEY 104 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVL 160 +S + +A+ + + R + + IN + V Sbjct: 105 VMTESPDVRGIDVALLYSPFTFKLLRWNSIRVTPIKGMRPTRDILYAAGQLINDDTLHVF 164 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 +H S + + + + +A D + + VIAGDFN + Sbjct: 165 VVHAPSRMGGELATRDHRMAVAKRLVEA---VDSVRNH-SNNAKIVIAGDFNDYQKDVSI 220 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 + K +D+ F + ++ + Sbjct: 221 QYVMHHDFLDISASAVGNHGAKG---TYKYRGEWGSLDHIFCSDPLIPFFQRCYVADFPF 277 Query: 281 --------------NEDDIKSRGKRLSDHCPISIDYDF 304 SDH P+ ++F Sbjct: 278 LLTEDEIYGGVQPLRNFHGARYQNGFSDHLPLVSLFNF 315 >gi|300784278|ref|YP_003764569.1| hypothetical protein AMED_2371 [Amycolatopsis mediterranei U32] gi|299793792|gb|ADJ44167.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] Length = 441 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 86/306 (28%), Gaps = 40/306 (13%) Query: 12 FLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 + P A A ++S+N+ L E TT+ + Y DI Sbjct: 17 VVSPAAAHAADGSGSFSVLSYNVAGLPESISS-APTPRDPATTAIGQRIAPY------DI 69 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 V ++E +Y+A + + + S + +++ + + + Sbjct: 70 VHVEEDFNYHAKLYAADNHPYRT-----PTSGGAGIGSGLNTLSSLPYDTDDFERVHWTS 124 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + + D + G + G + + H + + S Sbjct: 125 CQVDSGDCLTPKG--FTFMRVRLAEGMYVDFYNAHTNAGTNDGDEASRASN--------L 174 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 L +I + V+ GD N + D N + K Sbjct: 175 AQLTAFIKSH-SAGNAVVVMGDTNTRYTRAA--DTIAGFASDNGLTDAWVKLVRGGVAPA 231 Query: 249 KNL----------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +D + + L ++ + GK LSDH PI Sbjct: 232 PGSPALLCEPVVTNDCEIVDKVLYRSSNLVSLDATFYNNEHAK--FLDDSGKMLSDHDPI 289 Query: 299 SIDYDF 304 ++ + + Sbjct: 290 TVRFTW 295 >gi|289167379|ref|YP_003445648.1| exodeoxyribonuclease III [Streptococcus mitis B6] gi|288906946|emb|CBJ21780.1| exodeoxyribonuclease III [Streptococcus mitis B6] Length = 275 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 78/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K ++P +GA S R Sbjct: 55 KHLEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAP-STMDLEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +V ++ + ++ L + Sbjct: 114 I-----ITLEFDEFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAEL--------DKEK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 VMEIE 274 >gi|254823077|ref|ZP_05228078.1| hypothetical protein MintA_24325 [Mycobacterium intracellulare ATCC 13950] Length = 254 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 41/307 (13%), Positives = 75/307 (24%), Gaps = 84/307 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NI D LR + LD D++ LQE+ ++ Sbjct: 1 MRVATFNILHGRTVGDG-----------VDVARLRDCVRRLDPDVLSLQEVDCDQPRSER 49 Query: 84 FP------------KNTWCIFYSTER---LINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 ++ + S + + R+ IA+ + Q Sbjct: 50 ADLTAAAAEAMGAVEHRFVAAISGTPGATWMAATGREQPGTAAYGIALLSRYPVASWQVL 109 Query: 129 PLLGAKDSFS------------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 L F R AV + + V + HL + Sbjct: 110 RLPRIPMRFPMYLPGPNRVMIVDEEPRAAVIAQLRTPMGGLTVANTHLSFVPGWNR---- 165 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + L I + P ++ GD N +G Sbjct: 166 ------------RQLLRVIHDLRGFPGPRLLTGDLNMTPKTVGRWSGMRAL--------- 204 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ + D + S I SDH Sbjct: 205 ------ATAETFPADNPNRQLDHILTDDPRLRGGAVDASPMPI--------------SDH 244 Query: 296 CPISIDY 302 P+ +D Sbjct: 245 RPLVVDL 251 >gi|163854727|ref|YP_001629025.1| putative endonuclease [Bordetella petrii DSM 12804] gi|163258455|emb|CAP40754.1| putative endonuclease [Bordetella petrii] Length = 262 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 76/270 (28%), Gaps = 59/270 (21%) Query: 60 YAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + + AD++ LQE+ + + + + +S + +R Sbjct: 23 WMQTHSADVLCLQEIKISDADLTDDLRHPPGYTGHFCHAIKKGYSG--------VGMYLR 74 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 RV G A R + + K + V+ +L S D + Sbjct: 75 NTAERVQA------GLNCEEFDAEGRI-----IRADWKNLSVISAYLPSGSSGDERQQAK 123 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------LGNND 222 + L + + K++ FVI GD+N L Sbjct: 124 YRFLDVFGPWLDEL---MREHKKTGREFVICGDWNIAHKEIDLKNWKSNQKNSGFLPEER 180 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQE 273 + + + + D R N+ IDY + Sbjct: 181 AWLTEVFDKRGFVDVFRRLDERPEQYTWWSNRGQAWAKNVGWRIDYQIATPGLAARARSA 240 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 S + +R SDH P++IDYD Sbjct: 241 SI-----------YKDERFSDHAPLTIDYD 259 >gi|160885369|ref|ZP_02066372.1| hypothetical protein BACOVA_03368 [Bacteroides ovatus ATCC 8483] gi|298481599|ref|ZP_06999790.1| endonuclease/Exonuclease/phosphatase family protein [Bacteroides sp. D22] gi|156108991|gb|EDO10736.1| hypothetical protein BACOVA_03368 [Bacteroides ovatus ATCC 8483] gi|298272140|gb|EFI13710.1| endonuclease/Exonuclease/phosphatase family protein [Bacteroides sp. D22] Length = 341 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 39/343 (11%), Positives = 91/343 (26%), Gaps = 59/343 (17%) Query: 2 IRKYVLALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKN----------- 45 ++K ++ L + + Q+ + +N+ L + + Sbjct: 1 MKKSLMTLGVLALFVLMAYGQEKKFALYSVAFYNMENLFDTIHDEGKNDYEYLPNGTNQW 60 Query: 46 SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + + + + + L D I+ + E+ +Y + + + Sbjct: 61 NTMKYKAKLKNMSEILSLLSTDKLPMGPAIIGVSEIENYRVLEDILKQP---ALADRGYR 117 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 H + + + A K + + + + R + I +K+ Sbjct: 118 YVHYEGEDQRGVDCAFFYNPKLFELTNSKL-VPYVYINDTVHKTRGFLIASGNIADEKMH 176 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 + H S SP+ +Q + +KD + +++S VI GD N Sbjct: 177 FIVNHWPSR-------AAASPARERAGEQVRAIKDSL-LREDSAAKIVIMGDMNDDPMDK 228 Query: 219 GNNDDFWKTID-----PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLI 271 P D + D V N Sbjct: 229 SMAVALGAKRKPVDAGPTDLYNPWWDTLKKGYGTLMYKGKWNLFDQIVFTGNLLGTDRST 288 Query: 272 QESFSEILYNEDDIKSRGKR-----------------LSDHCP 297 + + +++ D + + + SDH P Sbjct: 289 LKFYKHEIFSRDFMFQKEGKYKGYPKRTQAGGVWLNGYSDHLP 331 >gi|157150318|ref|YP_001450810.1| exodeoxyribonuclease III [Streptococcus gordonii str. Challis substr. CH1] gi|157075112|gb|ABV09795.1| exodeoxyribonuclease III [Streptococcus gordonii str. Challis substr. CH1] Length = 275 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 80/305 (26%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q + +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLS------QAVLQTLQAENADIIAIQETKLSATGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K ++P +GA S R Sbjct: 55 KHLEILTNLFPDYENTWRSSQEPARKGYAGTMFLYKKELSPIVTFPEIGAP-STMDVEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +V ++ + + ++ L + Sbjct: 114 I-----ITLEFDDFFVTQVYTPNAGDGLKRLEDRQVWDAKYAEYLATL--------DEQK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F N Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERTGFTNLLAKGFTDTFRYLHGDIPNQY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 VMEIE 274 >gi|304390659|ref|ZP_07372612.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315654251|ref|ZP_07907159.1| exodeoxyribonuclease III [Mobiluncus curtisii ATCC 51333] gi|304326415|gb|EFL93660.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315491286|gb|EFU80903.1| exodeoxyribonuclease III [Mobiluncus curtisii ATCC 51333] Length = 286 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 83/312 (26%), Gaps = 58/312 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +R+ +WN+N + + + + + D++ +QE+ + Sbjct: 1 MRIATWNVN----------------SIRTRVNRVTAFLERENIDVLAMQEIKCRNDQFPT 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 F + +F + N + I + + + Q P + Sbjct: 45 LAFETAGYQVFVNGLNQWNGVAVAARQGISAHLLGTEFYGAIDQ---PYFSVPPKPPQLE 101 Query: 142 NRRAVELLVEINGKKIWVLDI----HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R + + ++V + HL L L++ S L + L ++ Sbjct: 102 PRVLGVRVAGVECWSLYVPNGREVGHLHYQYKLKWLDSLRSHVIRTLDTDPESLGLYLGD 161 Query: 198 K--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF---------------PKE 240 DF + + + D++ + Sbjct: 162 FNVAPRDEDVWDMADFAGATHVSEPERQVFAKLLDPDTVADAVTLHDDLIEGLPGNLTEI 221 Query: 241 KDSRCNANKNLRN---KIP------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + ID+ + + D + G++ Sbjct: 222 TRKFAPGWTYWDYQRARWRRNQGMKIDFALATPRLVSRVTGAYI-------DTAERDGEQ 274 Query: 292 LSDHCPISIDYD 303 SDH P+ +D++ Sbjct: 275 PSDHAPVIVDFE 286 >gi|45360457|ref|NP_988919.1| deoxyribonuclease I-like 3 [Xenopus (Silurana) tropicalis] gi|38181666|gb|AAH61621.1| deoxyribonuclease 1-like 3 [Xenopus (Silurana) tropicalis] Length = 295 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 37/300 (12%), Positives = 81/300 (27%), Gaps = 32/300 (10%) Query: 10 VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 + +++ S+N+ + E S + + ++R+ DI Sbjct: 4 LLLFWALFVPHTLGLQICSFNVQSFGE---------SKRDKPAVMNIVRKVISRC--DIT 52 Query: 70 FLQEMGSYNA-----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 L E+ + + + + R S + + RKK V V Sbjct: 53 LLMEIKDSSDTVIRSLMTQLNSQSETRNQFDLTISQRLGRKSYKEQY-GFIYRKKLVSVR 111 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 +Y ++ A +R + E + I + + E L Sbjct: 112 -GTYQYEDSQPGDPDAFSREPYVVWFEAPSTDVREFVIVPQH----TTPEAAVREIDELY 166 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + W + F+ GD N Y+ + + + +K+ Sbjct: 167 DVYLDVKQKW------NSENFIFMGDLNAGCAYVPKKAWGNIRLRTHSEFVWLIGDKEDT 220 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 I + ++ S + + + L SDH P+ + Sbjct: 221 TVKASTKCAYDRI--VMAGDKLLSSVVPGSAQVFDFMAVYGLTEDQALEVSDHFPVEVQL 278 >gi|325090500|gb|EGC43810.1| endonuclease/exonuclease/phosphatase [Ajellomyces capsulatus H88] Length = 299 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 37/295 (12%), Positives = 75/295 (25%), Gaps = 23/295 (7%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+++ NI + K R L ++ + + LQE+ Sbjct: 8 PIRILTHNIRY-ATSAPFRGEKPWKDRKQRLLNELHYHSCHNPETFICLQEVLHVQLNDI 66 Query: 83 VFPKNT-----------WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + N W + S A+ +++ V P + Sbjct: 67 LSGLNPSTSTSTGATTEWAYIGVGRDDGKQAGEYSPIFYRPAVWELEESKTVWLSETPSV 126 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + + R + + + VL + D + + L+ A Sbjct: 127 P-SRGWDASSIRIVTIGVFKHLVSRKRVLGMSTHL---DDQGSKSRYEAAKLILTMANLY 182 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW---KTIDPNDSLIRFPKEKDSRCNAN 248 ++ +AGDFN + N + +D + + Sbjct: 183 LTKNRLASRNINGIFLAGDFNSEENQEAYRVLTAVDSQFVDAQKQVDTALRYGSENTYTG 242 Query: 249 KNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + + E + G SDH + D Sbjct: 243 FGYEDEGPKRIDYVLFGPKHG--VNPAWSVEGYAVVPNKFDDGVLNSDHRAVVAD 295 >gi|328883057|emb|CCA56296.1| Exodeoxyribonuclease III [Streptomyces venezuelae ATCC 10712] Length = 276 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 32/275 (11%), Positives = 74/275 (26%), Gaps = 58/275 (21%) Query: 58 RQYAKNLDADIVFLQEMGSYNA--VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 ++ AD V LQE+ + A A+V W ++ + ++ Sbjct: 30 VEWLAGTSADAVCLQEVRAEEAQLPAEVRAPEGWFTVHAP----------AAAKGRAGVS 79 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + + + D R + ++ G + V ++L S ++ Sbjct: 80 LYTRREPDRVRVGFGSSEFDGSGR-------YVEADLPG--VTVASLYLPSGEAGTERQD 130 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LG 219 + L+ T+ V+ GD+N Sbjct: 131 EKYRFMGEFLPYLKELR---TRAAADGREVVVCGDWNIAHREADLKNWRANKKNAGFLPE 187 Query: 220 NNDDFWKTID--PNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYK 268 + + +D + + + IDY + Sbjct: 188 EREWLGRVLDEADGAYVDVVRALHPEQEGPYSWWSYRGRAFDNDTGWRIDYQIATPGLAA 247 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + + +R SDH P+++ Y+ Sbjct: 248 KAVKGYV-------ERAATHAERWSDHAPVTVVYE 275 >gi|317509131|ref|ZP_07966757.1| exodeoxyribonuclease III [Segniliparus rugosus ATCC BAA-974] gi|316252567|gb|EFV12011.1| exodeoxyribonuclease III [Segniliparus rugosus ATCC BAA-974] Length = 267 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 31/273 (11%), Positives = 66/273 (24%), Gaps = 55/273 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L + A+ + LQE+ + A A+ + + +A+ Sbjct: 23 LLGWLGESPAEYICLQEVRATEAEARAALAPVLADGWKLALAPA------AQKGRSGVAI 76 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + + +G D R +E + + ++L S + Sbjct: 77 LSRREPDAVR----IGFGDPQFADSGRY-----IEADFGTFTLASLYLPSGEAETERQVE 127 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK---------- 226 + +++ +I GD+N L + Sbjct: 128 KDQ-------FLKTFGEYLKPLARKRRDVLICGDWNIAHTELDIKNWKGNLKASGFLPHE 180 Query: 227 -------TIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFL 270 + +D + IDY V ++ K Sbjct: 181 RAWLSEVFGEGSDWTDVQRSFHPGEAGPYSWWSFRGQAFDNDSGWRIDYHVANKQLAKRA 240 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + R SDH P+ ++Y Sbjct: 241 A-------RVVTQRAERYDLRWSDHAPVIVEYT 266 >gi|149925921|ref|ZP_01914184.1| DNA-(apurinic or apyrimidinic site) lyase [Limnobacter sp. MED105] gi|149825209|gb|EDM84420.1| DNA-(apurinic or apyrimidinic site) lyase [Limnobacter sp. MED105] Length = 260 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 36/271 (13%), Positives = 74/271 (27%), Gaps = 61/271 (22%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + AD+V +QE+ ++ +A + P++ Y K S ++ + Sbjct: 22 DWMNQSQADVVCVQEIKAH--LADLGPEHLQPGAYKGYFQAAEKKGYSGVGLYCKVEPID 79 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 G ++ A R V + + V I+ S + + Sbjct: 80 VI----------YGLNNAEFDAEGRM-----VTAEFENMIVSSIYFPSGSSSEERQEAKF 124 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGNND 222 + + + P V+ GD+N Sbjct: 125 RFLEHF-------AEIFDEFESKKKPVVLCGDWNIAHQEIDLKNWKGNLKNSGFTPEERA 177 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNK---------IPIDYFVMDQNAYKFLIQ 272 I+ + + + N+ IDY ++ + + Sbjct: 178 WIGDVINKRGWIDAYRVLYPEETDGCYTWWSNRGQAYAKNVGWRIDYQMVSPALRDSIRE 237 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 S +G++ SDH P+ DYD Sbjct: 238 VSV-----------YKGQKFSDHAPLIADYD 257 >gi|326499027|dbj|BAK06004.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 605 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 50/346 (14%), Positives = 92/346 (26%), Gaps = 65/346 (18%) Query: 22 QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-- 77 ++S+NI + + + S T L + ADI+ LQE+ Sbjct: 252 GTFTVLSYNILADAYATSDAYSYCPTWALSWTYRRQNLMREIIGYHADIICLQEVQLNHF 311 Query: 78 -NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + A F K+ + Y ++ D R + V + A S Sbjct: 312 EDFFAPEFDKHGYQALYKKRTTEVYAGVPHAIDGCATFFRRDRFSHVKKYEVEFNKAAQS 371 Query: 137 FSR-----AGNRRAVELLVEINGKKIWVLDIHLKS-----------FCFLDSLENTYSPS 180 + A R A+ L++ N I VL+ + C ++ N + Sbjct: 372 LTDAIIPPAQKRVALNRLIKDNIALIAVLEAKFGNQGTENPGKRQLLCVANTHVNVHQDL 431 Query: 181 CSLLSQQAQWLKDWITQKKES-LVPFVIAGDFNRKINYLGNN------------------ 221 + + Q L + + S +P ++ GDFN + Sbjct: 432 KDVKLWEVQTLLKGLEKIANSADIPMLVCGDFNSIPGSTPHGLLAIGKVDQLHPDLAIDP 491 Query: 222 ------------------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 D R + N + Sbjct: 492 LGILRPVSKLTHQLPLVSAYSSFARMVGVGYDLEHQRRRMDSGTNEPLFTNCTRDFTGTV 551 Query: 258 DYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 DY + + E E +D + SDH + ++ Sbjct: 552 DYIFYTADSLSVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 597 >gi|66808471|ref|XP_637958.1| hypothetical protein DDB_G0285991 [Dictyostelium discoideum AX4] gi|60466398|gb|EAL64454.1| hypothetical protein DDB_G0285991 [Dictyostelium discoideum AX4] Length = 316 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 84/337 (24%), Gaps = 78/337 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNA 79 ++R VS+NI + + + W + L+ L ADI+ QE Sbjct: 3 NELRAVSYNIRFDNPSDKQNSWVHRKM-------LVFSNISFLKADIIGFQECLFHQIKD 55 Query: 80 VAKVFPKNTWCIF--------------------------YSTERLINHSKRDSNNDIHTA 113 + + N + N S +T Sbjct: 56 IKENLNNNYEMSYDFIGVGREYVTKIVLIILLKKKKKKNTYINYDGNEKGEFSPIFYNTK 115 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLD 171 + + P S++ A R L + K + L+ HL Sbjct: 116 KIELVHSHQFWVSETPYKVGSKSWNTACTRIVTWGLFKQKKTNKSFYFLNTHLDH----- 170 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID-- 229 L + L + +P ++ GDFN + TID Sbjct: 171 --------QSELARSEGTMLIKSFIATLKPQIPLILVGDFNSNDYQKPIENLISSTIDIN 222 Query: 230 ---------------PNDSLIRFPKEKDSRC-------NANKNLRNKIPIDYFVMDQNAY 267 F + + C + IDY ++Q Sbjct: 223 FAIKYIQLLEIPIRDDIAFQTLFNTKTIANCKIGPDSTFTGFDCAYSETIDYIFINQQFK 282 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +F + + SDH PI D F Sbjct: 283 AK----TFVVFNNHPSKVTKNSTIASDHFPIVADLKF 315 >gi|256372492|ref|YP_003110316.1| exodeoxyribonuclease III Xth [Acidimicrobium ferrooxidans DSM 10331] gi|256009076|gb|ACU54643.1| exodeoxyribonuclease III Xth [Acidimicrobium ferrooxidans DSM 10331] Length = 258 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 81/303 (26%), Gaps = 70/303 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +RL +WN+N + L+ +A+ + D++ LQE Sbjct: 2 TMRLATWNVN----------------SIRARIELVVAWAERVAPDVLLLQE---TKVATD 42 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP ++ + +AV + + G + Sbjct: 43 QFPADSLVSL-------GYHVTHWGTGAWNGVAVLTREAPREVR--YGTGFARAPLATEE 93 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 RA+ + +E W + +++ + LD Y L+ + Sbjct: 94 PRALAVRLEAG----WFMSVYVPNGRALDDPHYVYK------LTWLAELRAHLADLVADG 143 Query: 203 VPFVIAGDFNRKINYLGNNDD--------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN + D L + Sbjct: 144 --VVVGGDFNVAPSDHDVWDPSALEGATHVSLPERRALDALLGLGLTDVYRALHPDDPGF 201 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID + ++ + ++ + D R R SDH P+ Sbjct: 202 TWWDYRQGAFRRGMGMRIDLVLASEDIARNVVAV-------DVDIEARRAPRPSDHAPLV 254 Query: 300 IDY 302 +D Sbjct: 255 VDL 257 >gi|118791581|ref|XP_319828.3| AGAP009079-PA [Anopheles gambiae str. PEST] gi|116117671|gb|EAA15055.3| AGAP009079-PA [Anopheles gambiae str. PEST] Length = 565 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 33/323 (10%), Positives = 80/323 (24%), Gaps = 40/323 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWK-------NSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + R+VS+NI + L + AD++ LQE+ Sbjct: 241 GQFRVVSYNILADLYTDSEYSRTVLFGYTAPYALEIDYRKQLFVKEILGYRADLICLQEV 300 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI---------HTAIA---VRKKNVR 122 + + P + + + + ++ Sbjct: 301 DTKVFSLDLVPIFSRKNLAGHYQAKGKVAEGLATFYDLNKFELLEKDGVILSEILERYPL 360 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP--- 179 + + + + + LL + + +L + + D+ Sbjct: 361 LWDRIRDNQPLVERIANRSTALQLTLLRSKHDPRKHLLVANTHLYFAPDADHVRLLQMGY 420 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN------------YLGNNDDFWKT 227 + + +Q + ++ + + + V GDFN D Sbjct: 421 AMQYVCEQHERIRQQYELSEATDLALVFCGDFNSTPECGIYQLMTQQAVGPDVPDWVSNV 480 Query: 228 IDPNDSLIRFPKEKDS-----RCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYN 281 + + + N + K IDY + SE + Sbjct: 481 DEAVKGVSLSQPFQMGSACGCPEYTNYTVGFKACIDYIFFMRGALNVNDVIPMPSEEELS 540 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 SDH + ++++ Sbjct: 541 LYQAIPSLVFPSDHIALVANFEW 563 >gi|322375755|ref|ZP_08050267.1| exodeoxyribonuclease III [Streptococcus sp. C300] gi|321279463|gb|EFX56504.1| exodeoxyribonuclease III [Streptococcus sp. C300] Length = 275 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 77/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K S+P +GA S R Sbjct: 55 KHLEILEELFPGYENAWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDLEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +V ++ + ++ L + Sbjct: 114 I-----ITLEFDTFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAQL--------DKEK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 VLEIE 274 >gi|300859239|ref|YP_003784222.1| exodeoxyribonuclease III [Corynebacterium pseudotuberculosis FRC41] gi|300686693|gb|ADK29615.1| exodeoxyribonuclease III [Corynebacterium pseudotuberculosis FRC41] gi|302206930|gb|ADL11272.1| Putative exodeoxyribonuclease III [Corynebacterium pseudotuberculosis C231] gi|302331494|gb|ADL21688.1| Putative exodeoxyribonuclease III [Corynebacterium pseudotuberculosis 1002] gi|308277184|gb|ADO27083.1| Putative exodeoxyribonuclease III [Corynebacterium pseudotuberculosis I19] Length = 255 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 36/297 (12%), Positives = 79/297 (26%), Gaps = 62/297 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+V+WN+N + + + + + D++ +QE + Sbjct: 1 MRIVNWNVN----------------SARTRVDRMVDFLQRHNVDVLAVQETKCKDD---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y + I + + +A+ + Q + + + Sbjct: 41 ------QFPYERFQAIGYQVAHFGLNQWNGVAIISRVGLEDVQKHFPGQPGFNKDPQKEQ 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + + Y +WL ++ Sbjct: 95 AVEARAIGALCGGVRVWSLYVPNGREIADPHYDYK---------LRWLFALQLHAQDVTE 145 Query: 204 PFVIAGDFNRKINYLGNNDDFW---------KTIDPNDSLIRFPKEKDSRCNANKNLRN- 253 P V GDFN D + ++L S Sbjct: 146 PTVFLGDFNIAPRDQDVWDMSFFEGKTHVTEPERQAFEALTTSGLHIASPLEGYSYWDYQ 205 Query: 254 --------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ + + + D + GK SDH P+ +DY Sbjct: 206 AGRFLKNQGMLIDFQLATTDL---------TVENSFIDVDERSGKAASDHAPVIVDY 253 >gi|209738408|gb|ACI70073.1| Deoxyribonuclease gamma precursor [Salmo salar] Length = 274 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 36/283 (12%), Positives = 80/283 (28%), Gaps = 27/283 (9%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VA 81 +++ S+NI + + ++ L + DI+ + E+ + V Sbjct: 1 MKVASFNIQKFGQHKLLNPNT---------LATLVKIVSRY--DIIVILEVVDKSGTSVK 49 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K + L + + + + + ++ L ++ + A Sbjct: 50 KFLKELNKANENQKYTLQISPRLGRDKHKEQFMFLYRDDLVDLVNTWQYEDNQAGDVDAF 109 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R L K + + L E++ L + K W Sbjct: 110 AREPYILRF----KCLHSVLEDLVLIPVHTKPEDSVKELDELYDVFLEVTKKW------K 159 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 +I GDFN +YL I + + K+ N I + Sbjct: 160 TDNVMILGDFNADGSYLSKKGMKAIRIRSDKNFHWLIKDAVDTTANTGNDNTYDRI--VI 217 Query: 262 MDQNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDY 302 + ++ S + ++SDH P+ ++ Sbjct: 218 YGDDMLDAIVPNSAKPFNFQIAYGLSEEDALKVSDHYPVEVEL 260 >gi|147919368|ref|YP_686896.1| endonuclease/exonuclease [uncultured methanogenic archaeon RC-I] gi|110622292|emb|CAJ37570.1| predicted endonuclease/exonuclease [uncultured methanogenic archaeon RC-I] Length = 294 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 47/300 (15%), Positives = 82/300 (27%), Gaps = 31/300 (10%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + ++RL+SWNI G + + R + + + D++ LQE Sbjct: 6 SDRIRLLSWNICFGGIGAGRTGYDPITSR--ENLRGIVRAILGKSPDVIVLQEYRDAEE- 62 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K T N + I + S+ + + Sbjct: 63 TGGVIKAGLREAGYTCHSSNPGLDKNGILIALGRNLTDMYAVSPAASFKV-DTRRLDEIY 121 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY-SPSCSLLSQQAQWLKDWITQKK 199 R A L ++ G +L IH+ S L ++ +K Sbjct: 122 RYRWA-NLGLKSQGMSFELLGIHIPDVRPGRKGGPETFVRSIGHKQLIWDALIEYAREKL 180 Query: 200 ESLVPFVIAGDFNRKINYLGN----------------NDDFWKTIDPNDSLIRFPKEKDS 243 ++ +IAGDFN +N + R + Sbjct: 181 KTGSEAIIAGDFNTGLNAEDRSHNTDSYYLSDRMAYLKRLKNSHGEGLADAWRKFHPEPG 240 Query: 244 RCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + L N+ +DY + K L +S LSDH + D Sbjct: 241 PEDYTWFLGNRGFRLDYVFLTPGLGKRLSGVEYSHEERVS--------GLSDHSMVLADI 292 >gi|303312829|ref|XP_003066426.1| glucose-repressible alcohol dehydrogenase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240106088|gb|EER24281.1| glucose-repressible alcohol dehydrogenase, putative [Coccidioides posadasii C735 delta SOWgp] gi|320036731|gb|EFW18669.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Coccidioides posadasii str. Silveira] Length = 758 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 36/360 (10%), Positives = 87/360 (24%), Gaps = 81/360 (22%) Query: 22 QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 K +++N + + + + LL + DADIV LQE+ + Sbjct: 381 NKFTALTYNTLCDRYATNQQYGYAPSRALAWEFRRDLLLNEIRGHDADIVCLQEIDQGSY 440 Query: 80 VAKVFPKNTWCIFYSTERLINH------------SKRDSNNDIHTAIAVRKK---NVRVL 124 + + + + I + K + Sbjct: 441 HGFFREQLAYNDYKGVYWPKGRAQGMPEEEAKLVDGCATFFKGSKYILLEKNMIHFGQTA 500 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + G D ++R + + ++V + G+++ V++ + + ++ Sbjct: 501 VRRPDAKGQDDIYNRLWQKDNIAVIVFLENRLTGERMIVVN---AHIYWDPAYKDVKLIQ 557 Query: 181 CSLLSQQAQWLKD------------------------------------WITQKKESLVP 204 +++ ++ L + + S +P Sbjct: 558 VAIMMEEVTQLAEKYVKIPPCTDKTAFRFSEPEDGKESQGTSTPVEPAPSVEYSSASQIP 617 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC---- 245 ++ GDFN + + F + Sbjct: 618 ILVCGDFNSCPGSAVYNLLAHGRMAEEHPDLEKRLYGNLSRMGMSHPFTLKSAYSTIGEL 677 Query: 246 -NANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 N IDY N + + SDH + ++ Sbjct: 678 SFTNYTPGFTDVIDYIWYSSNTLQVTALLGEVDKEYLKRVPGFPNYHFPSDHLALMAEFS 737 >gi|190344380|gb|EDK36047.2| hypothetical protein PGUG_00145 [Meyerozyma guilliermondii ATCC 6260] Length = 497 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 87/311 (27%), Gaps = 47/311 (15%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 R+ S N+ ++ +KR + ++ L+ +V LQE+ + Sbjct: 196 TFRIYSHNVRNGGRDILDPGEESWLKRYRKITASI-KFNSQLN-TVVALQEVYKFQLDDI 253 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD------- 135 + N + E R + + + + K Y + + Sbjct: 254 MRDLNRYSPPEEPEWEAYGVGRIDGDQLGEFVPILFKTSEWEMVFYDSIWLNEDNPRMAL 313 Query: 136 -SFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + R + ++ ++G I V + HL E + S ++ + + Sbjct: 314 EGWDAKYLRIVSYVTLKHVSGNYINVFNTHL-----DHMGELSKQGSAQIILDKMNSINQ 368 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-----PKEKDSRCNAN 248 W P + GD N + N + + F K + Sbjct: 369 W---------PSFLCGDLNTEPNEKAYQIITEQFRNSAKLTTAFNKYGHSKSTVTGFEGE 419 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR----------------GKRL 292 L IDY + L + + L + G + Sbjct: 420 VLLNGGQNIDYIFA-PSYTAKLGETVLCDKLTTSPPSERYLDLRLKSFGMLHSKFNGLYM 478 Query: 293 SDHCPISIDYD 303 SDH PI D+ Sbjct: 479 SDHRPIVADFT 489 >gi|293371500|ref|ZP_06617920.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|292633537|gb|EFF52100.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] Length = 297 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 40/337 (11%), Positives = 79/337 (23%), Gaps = 75/337 (22%) Query: 1 MIRKYVLALVFFLVPCTASVAQ-----------------------------KVRLVSWNI 31 M + + L+ F+ AS + +R+ ++N+ Sbjct: 1 MKKIVIYTLITFIFSVFASSCEDNKDNSLYYPDFTWDTGDGEEDEDPVTETSMRVATYNL 60 Query: 32 NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----SYNAVAKVFPKN 87 + T+ + Q K+ D +I +E SY Sbjct: 61 Q-----------VETGTGWTNRRERVAQLIKDYDFEICGFEEASWEQRSYLGTQLASDYQ 109 Query: 88 TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE 147 T N + S + R P + + R V Sbjct: 110 ILAYGRDTGNDDNKAGEMSGILYKKSRYTLLDAGRFWFSETPEIPSNGWDETNFKRFCVW 169 Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207 + + + ++ Q L D ++ K + P Sbjct: 170 GKFKDSKTQKEFYLFETHMPLADNA-----------RKHACQMLVDAVSDKAKDNTPAFC 218 Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 GDFN + + + + K ID+ + Sbjct: 219 TGDFNATPDAPEIATTICQ---SGILKDAYREAAVQHGALFTFPSKKTRIDFIFV----- 270 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCP--ISIDY 302 + + + LSDH P I ++ Sbjct: 271 -----KHATVLSTRTIVSS-----LSDHYPMVIVVEI 297 >gi|224542024|ref|ZP_03682563.1| hypothetical protein CATMIT_01197 [Catenibacterium mitsuokai DSM 15897] gi|224525081|gb|EEF94186.1| hypothetical protein CATMIT_01197 [Catenibacterium mitsuokai DSM 15897] Length = 267 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 39/299 (13%), Positives = 84/299 (28%), Gaps = 56/299 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 ++L++ N ++LSE + + + + N D D++ LQE+ Sbjct: 1 MKLMTLNTHSLSESDEKN-----------KLQTIANFILNHDVDVICLQEVNQSMTAKSV 49 Query: 75 --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQS 127 S + ++ + + S ++ + +A+ K V ++ Sbjct: 50 STDSSYVGRDIIKEDNYALGLSRLLGDQYNWNYIPVKVGYDKFDEGVAIFSKYPIVNSEN 109 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 L D R ++ + + WV + D E + Sbjct: 110 TLLTQTNDYSFWKK-RNSLGVELVKENTHFWVYT--AHLGWWKDEEEPFINQWHK----- 161 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + VP +AGDFN + K D+ + Sbjct: 162 -------LKTIATKEVPVYLAGDFNAPDIIPNQSYTTIKEDGWFDTRDLADDVQGRFTAQ 214 Query: 248 NKNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 K IDY ++ ++ + +SDH + ++ Sbjct: 215 GKIDGWDEAVDGMRIDYIWCNKK---------EHVKSHHVIFDGTHEDVVSDHFGLFME 264 >gi|255727857|ref|XP_002548854.1| hypothetical protein CTRG_03151 [Candida tropicalis MYA-3404] gi|240133170|gb|EER32726.1| hypothetical protein CTRG_03151 [Candida tropicalis MYA-3404] Length = 400 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 35/334 (10%), Positives = 92/334 (27%), Gaps = 43/334 (12%) Query: 13 LVPCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 V ++S+N+ + S+ + + T + L+ + L DI+ Sbjct: 67 WVTINTERNNPFSIMSFNLLSQHYTWHL-TSVEQKYLDWTNYRFPLINKTISQLQCDIMC 125 Query: 71 LQEMG---SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK-KNVRVLQQ 126 QEM + FP + Y+ + L ++ +I + + + ++ Sbjct: 126 FQEMEFSVYKQFWSHNFPNPNFKSHYAKKTLPPCWGSSEDHIDGVSIFINTLRFDVLDKK 185 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD-----IHLKSFCFLDSLENTYSPSC 181 + A + + ++ + K ++ Sbjct: 186 EIHFANHILNHKEEFQLTADLKERMLPRNTVALIVKLFDKVANKIVYVANTHLYWSPEYN 245 Query: 182 SLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + + Q + L + + ++ ++AGD N +N ++ +D Sbjct: 246 DIKTLQMKILLNELNGFIQEDEDAYVLLAGDLNSTLNSSVIRILSSSGVNVSDCFSFKNY 305 Query: 240 EKDSRC-----------------------------NANKNLRNKIPIDYFVMDQNAYKFL 270 S + +D+ + ++ Sbjct: 306 NYGSNNCLVDKNGDIKNPFNFQSVYQPLISSNSLQFTSHTTGYSGILDHIFASKTKFQVN 365 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + Y + + SDH PI+ + + Sbjct: 366 RLLGGVDKSYIAKNGFPDAQFPSDHIPIAAEISY 399 >gi|56459690|ref|YP_154971.1| hypothetical protein IL0581 [Idiomarina loihiensis L2TR] gi|56178700|gb|AAV81422.1| Uncharacterized conserved secreted protein [Idiomarina loihiensis L2TR] Length = 402 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 44/396 (11%), Positives = 104/396 (26%), Gaps = 97/396 (24%) Query: 4 KYVLALVFFLVPCTAS----------VAQKVRLVSWNI-----NTLSEQEGVSLWKNSVK 48 +++L L F ++ S + +R+ ++N+ N LS+ E L K+ V Sbjct: 5 RFLLILTFVVLMIPTSFNAFAGSGKGEPETIRVATFNVSMDASNYLSDSELPQLDKSPVP 64 Query: 49 ----RTTSDYTLLRQYAKNLDADIVFLQE-----------MGSYNAVAKVFPKNTWCIFY 93 + + + + + DIV L E + ++ + Sbjct: 65 EVLQQDHEQIRGIAEILQRVRPDIVLLNEFDYVDKEIGVNVFQEKYLSIPQNGQKAIEYP 124 Query: 94 STERLINHSKRDSNND---------------------IHTAIAVRKKNVRVLQQSYPLLG 132 T ++ S D + + K + ++ Sbjct: 125 YTYIAPVNTGVASPFDLNRDGTAQGTGIDAWGFGWYPGQYGMVILSKYPLLTDKARTFQH 184 Query: 133 --------------------AKDSFSRAGNRRAVE---------LLVEINGKKIWVLDIH 163 D + A + V++ K I +L H Sbjct: 185 FLWKDMPGRHIPYVMNEQEQPTDEQWYSDEIMAQYPLSSKSHWDVPVQVGDKVIHLLAAH 244 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWL----------KDWITQKKESLVPFVIAGDFNR 213 F + + + A +L + + + F++ GD N Sbjct: 245 PVPPAFDGPENSNGMRNYDEIRLLADYLTPGSDNYLYDDNGVRGGLGADESFIVMGDMNA 304 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-------NKNLRNKIPIDYFVMDQNA 266 + G + + + P+ + ++ + +DY + + Sbjct: 305 EAGSGGIDGAIEQLLQHPRVNDVKPQSRGGEQHSPDKRGSQYHTAAWRKRVDYVLPSNDL 364 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + SDH + +D Sbjct: 365 VVKDAGVFWPVGDEAGSRLMQKRSASSDHRMVWLDI 400 >gi|228476525|ref|ZP_04061215.1| metal-dependent hydrolase [Streptococcus salivarius SK126] gi|228251946|gb|EEK10992.1| metal-dependent hydrolase [Streptococcus salivarius SK126] Length = 303 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 38/284 (13%), Positives = 79/284 (27%), Gaps = 54/284 (19%) Query: 48 KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST------------ 95 + + L++ DI+ QE+ + V + S Sbjct: 46 EDAEGKFQTLKEQILKAQYDIICFQEVNQEIETSVVDTDAYYHALPSATPIHQDHFVRLL 105 Query: 96 ----------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + ++ +AV + + L+ D + RR Sbjct: 106 VEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTASE--ILVSDVDDPTDYHTRRV 163 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++G+++ V +HL + E + K P Sbjct: 164 AVAETTVDGREVAVASVHLSWWDKGFQEEWARIE----------------ERFKAIGKPL 207 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYF 260 ++AGDFN G+ +++ DS + S + K + IDY Sbjct: 208 ILAGDFNNPAGREGHQAILASSLNLQDSFEVAKETTGSYTVGPGIDGWKGNEEPLRIDYV 267 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 Q+ ++ + + +SDH + + F Sbjct: 268 FASQD---------WTVERLSVIFDGNNQPLVSDHYGLEAELTF 302 >gi|260219779|emb|CBA26652.1| hypothetical protein Csp_H39670 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 263 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 31/274 (11%), Positives = 74/274 (27%), Gaps = 58/274 (21%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L + D + +QE+ + + + + + ++ + V Sbjct: 20 LEAWLTQAQPDCICVQEVKAQA--PDIAGRFEYFGELQGH------FHFAEKKGYSGVGV 71 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 K+ + D+ R VEL + +K ++ + S + + Sbjct: 72 YTKHAPSDVRIGYGSAEFDAEGRY-----VELRFDTPSRKFSIISAYFPSGSSGEERQAA 126 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGN 220 + Q L+ V+ GD N Sbjct: 127 KFRFLAEFYPHLQQLRA--------ERELVLCGDLNIAHQEVDLKNWKGNKKNSGFLPEE 178 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNK---------IPIDYFVMDQNAYKFL 270 K + + + + + + + N+ +DY Sbjct: 179 RAWMSKALSEGGLVDVYRQLEPTATDDCYTWWSNRGQAYAKNVGWRLDY----------- 227 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + ++ + ++ SDH PI++ YDF Sbjct: 228 HLATPALAATAKEVAIYKAEKFSDHAPITVSYDF 261 >gi|153001903|ref|YP_001367584.1| endonuclease/exonuclease/phosphatase [Shewanella baltica OS185] gi|151366521|gb|ABS09521.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS185] Length = 402 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 44/382 (11%), Positives = 90/382 (23%), Gaps = 104/382 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +++ S N+ E S + L ++ + DIV QE+ S + Sbjct: 18 IKIASINLFNFIEPPLAYYDFENIYSHGQWQKKCQWLSEFLTHRQPDIVGFQEVFSPEPL 77 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR---VLQQSYPLLGAKDSF 137 ++ ++ A+A R V V + + S Sbjct: 78 KRIASVQG-LAHFAVVDEPTLISDYIYRSPVVALASRYPIVEISSVEPGARLVAAMGLSS 136 Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENT-------------------- 176 A +R+ + +E+ K +H KS +LE Sbjct: 137 EFAFSRKVLRATIEVPHIGKCDFYVVHFKSKRAGLALEPKLIEPKLSEHQRFENQPLGFD 196 Query: 177 -----------------------YSPSCSLLSQQAQWL-KDWITQKKESLVPFVIAGDFN 212 S +A L + +++ S P ++ GDFN Sbjct: 197 NSAPAASMKLHSETQLLTEQALGRWASTMQRGAEAALLFNGILVRRQASKYPVIVMGDFN 256 Query: 213 RKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN----------- 246 + + + F + + Sbjct: 257 DSLTMGALDALTIQGESIHSNDIKAAGLGHLSDAALAAVFAQYQLKDAYELFIEANLFIN 316 Query: 247 --------------------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + +DY ++ + + Y D Sbjct: 317 ANQQGSLTGNTAFHREHRAATHYYGPKGSVLDYILLSSEFDASHGRSLAQVVDYQTCDRH 376 Query: 287 ------SRGKRLSDHCPISIDY 302 R +DH P+ ++ Sbjct: 377 LVRPEYERDAYSTDHAPVIVEL 398 >gi|238855799|ref|ZP_04646091.1| exodeoxyribonuclease III [Lactobacillus jensenii 269-3] gi|260665239|ref|ZP_05866088.1| exodeoxyribonuclease III [Lactobacillus jensenii SJ-7A-US] gi|282933520|ref|ZP_06338892.1| exodeoxyribonuclease III [Lactobacillus jensenii 208-1] gi|238831575|gb|EEQ23920.1| exodeoxyribonuclease III [Lactobacillus jensenii 269-3] gi|260560976|gb|EEX26951.1| exodeoxyribonuclease III [Lactobacillus jensenii SJ-7A-US] gi|281302366|gb|EFA94596.1| exodeoxyribonuclease III [Lactobacillus jensenii 208-1] Length = 275 Score = 74.6 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 83/303 (27%), Gaps = 56/303 (18%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L+SWNI++L+ + R + + DI+ +QE Sbjct: 3 LISWNIDSLNAALTSDSARAQKTRH------VLTQIAEKEPDILAIQETKLRATGPTKKH 56 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + S + + K + SYP +GA D+ G Sbjct: 57 AEILQEMFPDYDYVWRSSEEPARKGYAGTMYLYKKSLKPEVSYPKIGAPDTMDFEGR--- 113 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++ + + +V ++ + + + Q L + P Sbjct: 114 ---IITLEFPEYFVTQVYTPNAGGELKRLSDRQGWDKKYIEYLQEL--------DVQKPV 162 Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + +GD+N + + F K + Sbjct: 163 LASGDYNVAHEEIDLKHPENNHHSAGFTDEERADFTELLAAGFTDSFRKIHGNIPEVYSW 222 Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY++ + + ++ G+R DHCPI + Sbjct: 223 WAQRIRTAKANNSGWRIDYWLTSNRIADKIKKS----------EMMDTGERA-DHCPIVL 271 Query: 301 DYD 303 + + Sbjct: 272 EIE 274 >gi|306834074|ref|ZP_07467194.1| exodeoxyribonuclease III [Streptococcus bovis ATCC 700338] gi|304423647|gb|EFM26793.1| exodeoxyribonuclease III [Streptococcus bovis ATCC 700338] Length = 275 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 81/305 (26%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + R + +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAVMSR------AVIDTLVTENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + S + + K+ SYP +GA D+ G Sbjct: 55 KHLQILQDYFPEYEVSWRSSVEPARKGYAGTMFLYKSSLTPSISYPEIGAPDTMDSEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + K +V ++ + + L Sbjct: 114 -----IITLEFDKFFVTQVYTPNAGDGLKRLAERQIWDEKYADYLTELDQV--------K 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F + Sbjct: 161 PVLATGDYNVAHKEIDLAHPSSNRRSPGFTDEERAGFTNLLAKGFTDTFRYIHGDIPDVY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 SWWAQRSKTSKINNSGWRIDYWLTSSRIADKITKSEMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 VLEID 274 >gi|302524148|ref|ZP_07276490.1| exodeoxyribonuclease III [Streptomyces sp. AA4] gi|302433043|gb|EFL04859.1| exodeoxyribonuclease III [Streptomyces sp. AA4] Length = 282 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 31/272 (11%), Positives = 71/272 (26%), Gaps = 55/272 (20%) Query: 58 RQYAKNLDADIVFLQEMGSYNA--VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 ++ +AD+V QE+ + A A V W ++ S ++ Sbjct: 35 VEWLAATEADVVACQEVRAEAAQLPASVVAPEGWFAAHAP----------SVVKGRNGVS 84 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + + ++ + R L + + G + V ++L S ++ Sbjct: 85 LYSRVEPDEVRTGFGEPEFEDSGR-------YLEMHLPG--VVVASLYLPSGDVGTERQD 135 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN---- 231 L+ + V+ GD+N + + + + Sbjct: 136 EKERFMDAFLPYLVELRA---KSAAEGREVVVVGDWNIAYDTVDLKNWRGNQKNSGFLPE 192 Query: 232 -----------DSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLI 271 + + ID + + + Sbjct: 193 EREWMGRVYEAGYTDVQRRLDPEGPGPYTWWSYRGKAFDNDSGWRIDCQLATPGLAEKVK 252 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +S +R SDH P++ YD Sbjct: 253 SV-------VVERAESYDQRWSDHAPVTATYD 277 >gi|332669652|ref|YP_004452660.1| exodeoxyribonuclease III Xth [Cellulomonas fimi ATCC 484] gi|332338690|gb|AEE45273.1| exodeoxyribonuclease III Xth [Cellulomonas fimi ATCC 484] Length = 277 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 33/308 (10%), Positives = 76/308 (24%), Gaps = 67/308 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 + + + N+N + + ++ D++ LQE+ Sbjct: 8 LTIATVNVNGIRAAYKRG---------------MGEWLAVRKPDVLLLQEVRASDEILAD 52 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKDSFSRA 140 + ++ W + + S +A+ + + D+ Sbjct: 53 HLTAEDGWHLAH----------EASETKGRAGVAIASRLPMDAVRIGLRTGVTGDTGRWV 102 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 AV + + V+ ++ S PS + + + Sbjct: 103 EADLAVPSHDGAPARTVTVVSTYIHSGTLGT-------PSMDEKYAFLDHVTARLGDLSQ 155 Query: 201 SLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSR 244 + V+AGD N + + D + Sbjct: 156 AGGYAVVAGDLNIAHREADIKNWKGNLRSAGFLPQERAYLDRWFDDLSWRDLGRELGGEG 215 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + IDY + + + D + +R SDH Sbjct: 216 PGPFTWWSWRGQAFDNDSGWRIDYQLATPDLADAAVAA-------TVDRAPTYAERFSDH 268 Query: 296 CPISIDYD 303 P+ ++YD Sbjct: 269 APLVVEYD 276 >gi|114329634|gb|ABI58270.1| exodeoxyribonuclease [Streptomyces coelicolor A3(2)] Length = 267 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 33/308 (10%), Positives = 79/308 (25%), Gaps = 71/308 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + S N+N L + ++ AD++ LQE+ Sbjct: 2 LTVTSVNVNGL---------------LAAAKKGFVEWLAGTSADVLCLQEVR-------- 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + ++ H +++ + + D+ R Sbjct: 39 -AEPHQLPDHAGAPEGWHVTHAPAAAKGRAGVSLYTRREPDAVRVGFGSTEFDTSGR--- 94 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + ++ G + V ++L S ++ + L++ + Sbjct: 95 ----YVEADLPG--VTVASLYLPSGEVGTERQDEKVRFMGEFLAYLKELRERAAAQ---G 145 Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDP--NDSLIRFPKEKDSR 244 V+ GD+N + + +DP + Sbjct: 146 REVVVCGDWNIAHREADLKNWRANKKNSGFLPEEREWLGRVLDPAEGGYVDVVRALHPDV 205 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + IDY V ++ + + +R SDH Sbjct: 206 EGPYSWWSYRGRAFGNDAGWRIDYHVSTPGLAAKAVKGYV-------ERAATHAERWSDH 258 Query: 296 CPISIDYD 303 P+++ Y+ Sbjct: 259 APVTVVYN 266 >gi|223944849|gb|ACN26508.1| unknown [Zea mays] Length = 282 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 39/282 (13%), Positives = 83/282 (29%), Gaps = 25/282 (8%) Query: 27 VSWNI---NTLSEQEGVSLWKNSV-KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +S+NI + L R S L+ + ++ D D+V LQE+ + +A Sbjct: 1 MSYNILADYNARNHPDLYLDAPWDAMRWDSRRRLIIREIRHWDPDVVCLQEVDRFQDIAA 60 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + +R + AI + K + ++++ N Sbjct: 61 GMKSRGYEGIFQ--------RRTGDTRDGCAIFWKSKQLHLVEEDSIDFSE----FNLRN 108 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 A + E+NG +VL F + ++ W ++ + Sbjct: 109 NVAQICVFELNGTHKFVLGNIHVLFNPKRGDVKLGQTYPDISHSLLKY--QWTDEEVRNA 166 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 + + + K N L P + + + +DY Sbjct: 167 TGYSNVMVAEHPLKLSSSY-AMLKGNSNNRGLHGEPLAT------SYHRKFLGTVDYLWH 219 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + ++ + + SDH PI ++ F Sbjct: 220 THGIECSRVLDTLPISVLKRTRGLPTREIGSDHLPIVAEFAF 261 >gi|198422742|ref|XP_002124404.1| PREDICTED: similar to endonuclease/exonuclease/phosphatase family domain containing 1 [Ciona intestinalis] Length = 560 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 37/294 (12%), Positives = 93/294 (31%), Gaps = 38/294 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 VR+ +WN+ S R ++ I+ +QE+ NA+ ++ Sbjct: 261 VRVATWNLQHCSCD---------KTRNPGVREVVCMTILENGVKILGVQELDDENALNEI 311 Query: 84 FPKNTWCIFYSTERLINHS-----------KRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + + +R + S + ++ + V + L Sbjct: 312 VNELNNPTLPNIQRFKSTSTWKCSVLPTAEGKLFQGTEYSGFLWEESIVDYNNSA---LV 368 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 K + R+ + ++ + ++++H++ D + + + L + + Sbjct: 369 KKSVGGKKFARQPMLGFFKVGKVDLVLVNLHMEDDASDDLM--RFGENVKDLPEILDAVD 426 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + ++++ VI GDF+ + ++ + P + N Sbjct: 427 HHLDEEEK---VVVILGDFSVGPDETE-----FEALGAKSYKPVIPCNVPTNINRKDMKG 478 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK----RLSDHCPISIDY 302 ++ D ++Q+A E + G +SDHCP + Sbjct: 479 SRCR-DNLWLNQSATALYTSEWKVVRNGLTNPWIPDGWSWGGVVSDHCPAWVQL 531 >gi|139474328|ref|YP_001129044.1| exodeoxyribonuclease [Streptococcus pyogenes str. Manfredo] gi|134272575|emb|CAM30841.1| exodeoxyribonuclease [Streptococcus pyogenes str. Manfredo] Length = 275 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 83/306 (27%), Gaps = 56/306 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + R + DADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTGESPRALLSR------AVLDTLVAQDADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + S + + KN ++P +GA + G Sbjct: 55 KHIEALLSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +V ++ + + + L ++ Sbjct: 114 -----IITLEFEDFFVTQVYTPNAGDGLRRLDDRQIWDHKYADYLTEL--------DAQK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F + Sbjct: 161 PVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHLHGDIPHVY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLASNRLVDKVKRSEMISSGERQ-----------DHTPI 269 Query: 299 SIDYDF 304 +D DF Sbjct: 270 LLDIDF 275 >gi|194384902|dbj|BAG60857.1| unnamed protein product [Homo sapiens] Length = 392 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 83/287 (28%), Gaps = 48/287 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 L++WNI+ L + + Y D++FLQE+ Sbjct: 144 FSLITWNIDGLDLNN-----------LSERARGVCSYLALYSPDVIFLQEV--------- 183 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + TAI ++K V++ Q + R Sbjct: 184 --IPPYYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPST-----KMMR 236 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V ++G ++ ++ HL+S + Q + + + + Sbjct: 237 NLLCVHVNVSGNELCLMTSHLEST----------RGHAAERMNQLKMVLKKMQE-APESA 285 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKIPI 257 + AGD N + + I + + + N K+ Sbjct: 286 TVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRF 345 Query: 258 DYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D A + +I S + + G+ SDH + + D Sbjct: 346 DRIFFRAAAEEGHIIPRSLDLLGL---EKLDCGRFPSDHWGLLCNLD 389 >gi|119575862|gb|EAW55458.1| TRAF and TNF receptor associated protein, isoform CRA_a [Homo sapiens] Length = 392 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 83/287 (28%), Gaps = 48/287 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 L++WNI+ L + + Y D++FLQE+ Sbjct: 144 FSLITWNIDGLDLNN-----------LSERARGVCSYLALYSPDVIFLQEV--------- 183 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + TAI ++K V++ Q + R Sbjct: 184 --IPPYYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPST-----KMMR 236 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V ++G ++ ++ HL+S + Q + + + + Sbjct: 237 NLLCVHVNVSGNELCLMTSHLEST----------RGHAAERMNQLKMVLKKMQE-APESA 285 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKIPI 257 + AGD N + + I + + + N K+ Sbjct: 286 TVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRF 345 Query: 258 DYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D A + +I S + + G+ SDH + + D Sbjct: 346 DRIFFRAAAEEGHIIPRSLDLLGL---EKLDCGRFPSDHWGLLCNLD 389 >gi|7578789|gb|AAF64144.1|AF223469_1 AD022 protein [Homo sapiens] Length = 362 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 83/287 (28%), Gaps = 48/287 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 L++WNI+ L + + Y D++FLQE+ Sbjct: 114 FSLITWNIDGLDLNN-----------LSERARGVCSYLALYSPDVIFLQEV--------- 153 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + TAI ++K V++ Q + R Sbjct: 154 --IPPYYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPST-----KMMR 206 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V ++G ++ ++ HL+S + Q + + + + Sbjct: 207 NLLCVHVNVSGNELCLMTSHLEST----------RGHAAERMNQLKMVLKKMQE-APESA 255 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKIPI 257 + AGD N + + I + + + N K+ Sbjct: 256 TVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRF 315 Query: 258 DYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D A + +I S + + G+ SDH + + D Sbjct: 316 DRIFFRAAAEEGHIIPRSLDLLGL---EKLDCGRFPSDHWGLLCNLD 359 >gi|31652284|emb|CAD92510.1| TRAF and TNF receptor-associated protein (TTRAP)(EAP2, AD022, MGC9099) [Homo sapiens] gi|119575863|gb|EAW55459.1| TRAF and TNF receptor associated protein, isoform CRA_b [Homo sapiens] Length = 304 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 83/287 (28%), Gaps = 48/287 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 L++WNI+ L + + Y D++FLQE+ Sbjct: 56 FSLITWNIDGLDLNN-----------LSERARGVCSYLALYSPDVIFLQEV--------- 95 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + TAI ++K V++ Q + R Sbjct: 96 --IPPYYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPST-----KMMR 148 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V ++G ++ ++ HL+S + Q + + + + Sbjct: 149 NLLCVHVNVSGNELCLMTSHLEST----------RGHAAERMNQLKMVLKKMQE-APESA 197 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKIPI 257 + AGD N + + I + + + N K+ Sbjct: 198 TVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRF 257 Query: 258 DYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D A + +I S + + G+ SDH + + D Sbjct: 258 DRIFFRAAAEEGHIIPRSLDLLGL---EKLDCGRFPSDHWGLLCNLD 301 >gi|23510348|ref|NP_057698.2| tyrosyl-DNA phosphodiesterase 2 [Homo sapiens] gi|67462008|sp|O95551|TYDP2_HUMAN RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase; AltName: Full=ETS1-associated protein 2; AltName: Full=ETS1-associated protein II; Short=EAPII; AltName: Full=TRAF and TNF receptor-associated protein gi|11493669|gb|AAG35600.1|AF201687_1 ETS1-associated protein 2 [Homo sapiens] gi|4210353|emb|CAA21141.1| TRAF and TNF receptor-associated protein (TTRAP)(EAP2, AD022, MGC9099) [Homo sapiens] gi|8247254|emb|CAB92966.1| TRAF and TNF receptor associated protein [Homo sapiens] gi|17028465|gb|AAH17553.1| TRAF and TNF receptor associated protein [Homo sapiens] gi|47060297|gb|AAT09764.1| TRAF and TNF receptor associated protein [Homo sapiens] gi|83759169|gb|AAI10376.1| TRAF and TNF receptor associated protein [Homo sapiens] gi|167773417|gb|ABZ92143.1| TRAF and TNF receptor associated protein [synthetic construct] gi|306921401|dbj|BAJ17780.1| TRAF and TNF receptor associated protein [synthetic construct] Length = 362 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 83/287 (28%), Gaps = 48/287 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 L++WNI+ L + + Y D++FLQE+ Sbjct: 114 FSLITWNIDGLDLNN-----------LSERARGVCSYLALYSPDVIFLQEV--------- 153 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + TAI ++K V++ Q + R Sbjct: 154 --IPPYYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPST-----KMMR 206 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V ++G ++ ++ HL+S + Q + + + + Sbjct: 207 NLLCVHVNVSGNELCLMTSHLEST----------RGHAAERMNQLKMVLKKMQE-APESA 255 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKIPI 257 + AGD N + + I + + + N K+ Sbjct: 256 TVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRF 315 Query: 258 DYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D A + +I S + + G+ SDH + + D Sbjct: 316 DRIFFRAAAEEGHIIPRSLDLLGL---EKLDCGRFPSDHWGLLCNLD 359 >gi|7023883|dbj|BAA92119.1| unnamed protein product [Homo sapiens] Length = 362 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 83/287 (28%), Gaps = 48/287 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 L++WNI+ L + + Y D++FLQE+ Sbjct: 114 FSLITWNIDGLDLNN-----------LSERARGVCSYLALYSPDVIFLQEV--------- 153 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + TAI ++K V++ Q + R Sbjct: 154 --IPPYYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPST-----KMMR 206 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V ++G ++ ++ HL+S + Q + + + + Sbjct: 207 NLLCVHVNVSGNELCLMTSHLEST----------RGHAAERMNQLKMVLKKMQE-APESA 255 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKIPI 257 + AGD N + + I + + + N K+ Sbjct: 256 TVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRF 315 Query: 258 DYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D A + +I S + + G+ SDH + + D Sbjct: 316 DRIFFRAAAEEGHIIPRSLDLLGL---EKLDCGRFPSDHWGLLCNLD 359 >gi|114330706|ref|YP_746928.1| exodeoxyribonuclease III Xth [Nitrosomonas eutropha C91] gi|114307720|gb|ABI58963.1| exodeoxyribonuclease III Xth [Nitrosomonas eutropha C91] Length = 257 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 85/305 (27%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++ N+N L L + +AD++ +QE+ + Sbjct: 1 MRIITLNLNGLRSAASKG---------------LFDWLPQQEADVICVQELKAQQ----- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 N T + + ++ + + ++ + D+ R Sbjct: 41 ---NDINGVMRTPDGYSGYFHCAVKKGYSGVGIYTRHAPDQIVEGTGIAEIDAEGRF--- 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ + V+ I+L S + + Q L + Sbjct: 95 ------LRVDFGNLTVISIYLPSGSSGEHRQAAKFFFMEHFFPLLQSLAE-------GGR 141 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD+N L + T+ L+ + + + Sbjct: 142 EVLLCGDWNIAHKEIDLKNWRSNQKNSGFLPEERAWLSTVFDELKLVDVFRTINPEPDQY 201 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY + S + +R SDH P+ Sbjct: 202 TWWSNRGQAWAKNVGWRIDYQIATPGLASTATGASI-----------YKTERFSDHAPLL 250 Query: 300 IDYDF 304 IDYDF Sbjct: 251 IDYDF 255 >gi|325955052|ref|YP_004238712.1| endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922] gi|323437670|gb|ADX68134.1| Endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922] Length = 343 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 36/302 (11%), Positives = 81/302 (26%), Gaps = 78/302 (25%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 ++ + ++S+N + + + Q+ ADI+ QE Sbjct: 100 STAKPNLSVMSYNAHFIRDDGTD------------------QFIAKNLADIMMFQEAYEK 141 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 N + ++ + IA K + + + Sbjct: 142 NFKSIEKELQSYYSEHYGL-----------------IAFFSKYPIIETKQINFPTQNNKG 184 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL-------------- 183 + A ++ I +++I++++ +L + + + Sbjct: 185 T------AAYADIDTGKDTIRLVNIYMETMGVDKNLVKSTIEAENSAQVEEKTKKIENKL 238 Query: 184 ---LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + + LK+ + +S P ++ D N F + Sbjct: 239 IAGMLMHEKQLKEIMPYITKSPYPVLVGCDLNATPASYEYQQL------NAYLYDSFLQV 292 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 R I IDY + + D K K+ SDH P+ + Sbjct: 293 GKGNATTFHGFRFPIRIDYLFHSKE--------------FIPIDGKIIRKKFSDHYPVIV 338 Query: 301 DY 302 Y Sbjct: 339 QY 340 >gi|85717081|ref|ZP_01048042.1| exodeoxyribonuclease III [Nitrobacter sp. Nb-311A] gi|85696119|gb|EAQ34016.1| exodeoxyribonuclease III [Nitrobacter sp. Nb-311A] Length = 257 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 86/304 (28%), Gaps = 74/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 +++ ++NI+ ++ L ++ K+ D+V LQ++ + Sbjct: 1 MKIATFNIDNVNT----------------RLPNLLEWLKHSKPDVVCLQDLKCEERDFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + +++ +N AI R+ + V ++ P + Sbjct: 45 AALREAGYSAVWESQKSLN----------GVAILSRRSHPIVTRRRLPGDPSD------- 87 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R A + + G + + ++L E Y L + + Sbjct: 88 -REARYIEAAVGG--LLIACLYLPKGNPQPGPEFDYK------MSWLSRLTKHAARLQGQ 138 Query: 202 LVPFVIAGDFNRKINYLGN----------------NDDFWKTIDPNDSLIRFPKEKDSRC 245 P ++ G++N L F + + + R Sbjct: 139 DHPALLVGNYNVAPTDLDMCSTESWTNDARVQQTQRKAFASLLANGWTDALRDVYRHERV 198 Query: 246 NANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +D+F++ + LI+ D K SDH P Sbjct: 199 YTFWTYGRDRYEKDHAFRLDHFLLSKAVASRLIKAGV-------DGDGRSEKNASDHAPA 251 Query: 299 SIDY 302 I Sbjct: 252 WIKL 255 >gi|73539900|ref|YP_294420.1| AP endonuclease [Ralstonia eutropha JMP134] gi|72117313|gb|AAZ59576.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Ralstonia eutropha JMP134] Length = 258 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 88/307 (28%), Gaps = 78/307 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VA 81 +R++S N+N + + ++ DAD+V +QE+ + A Sbjct: 2 LRIISANLNGIRSASKKGFF---------------EWMGKQDADMVCVQELKAQAADMTE 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + ++ +S + R K RV+ G + + Sbjct: 47 AFLAPHGYHGYFHYAEKKGYSG--------VGLYTRHKPERVI------TGFGNPEFDSE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R VE+ + V+ +++ S + + L K S Sbjct: 93 GRY-----VEVQYPHLAVISVYVPSGSSSEERQQAKFRFMEAFLPHLLQL-------KAS 140 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKT---------------IDPNDSLIRFPKEKDSRCN 246 V+ GD N + + + + ++ D R Sbjct: 141 GREIVLCGDVNIAHKEIDIKNWKGNLKNSGFLPEERAWIGQLFDMHGYVDVFRQLDPRPE 200 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + S + ++ SDH P Sbjct: 201 QYTWWSNRGQAYAKNVGWRIDYHLATPKIAGTAHVCSI-----------YKDEKFSDHAP 249 Query: 298 ISIDYDF 304 +SIDY++ Sbjct: 250 LSIDYNY 256 >gi|19074877|ref|NP_586383.1| similarity to CARBON CATABOLITE REPRESSOR PROTEIN 4 [Encephalitozoon cuniculi GB-M1] gi|74621489|sp|Q8SU52|CCR4_ENCCU RecName: Full=Probable glucose-repressible alcohol dehydrogenase transcriptional effector homolog; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase gi|19069602|emb|CAD25987.1| similarity to CARBON CATABOLITE REPRESSOR PROTEIN 4 [Encephalitozoon cuniculi GB-M1] Length = 493 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 39/317 (12%), Positives = 80/317 (25%), Gaps = 41/317 (12%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 V + ++NI + ++ + V + + Q + DI+ LQE+ Y+ Sbjct: 169 GDTVSVGTFNILSNIYATRMTYAPSWVINSEFRREGVLQEIVLYNVDILCLQEIELYSFF 228 Query: 81 AKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKK----------------NVRV 123 + + S K + A+ + V Sbjct: 229 DFYKEQLEMRCNYDSIIYPRGRVKSVPDKKNVDGCAIFWRRSKFRLIAQFPIDFHQKVIQ 288 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + D + + N LL NG+++ V++ H+ ++ Sbjct: 289 DTRFNTNQELLDRYGKKDNIAIGALLERPNGQQVLVMNTHIFWDPDYPDIKLLQVLLLVE 348 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 ++ + ++ GDFN + ID D + Sbjct: 349 EIKRV--------SSRHPNACLLLQGDFNSLRSSSVYKSITTPVIDFADFGDTMQHLSNQ 400 Query: 244 RC----------------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + N K IDY + + Sbjct: 401 QFGDGLGLNDAYSNQDLGFTNFTPGFKGVIDYIFYGGGISLASVLSPVEDEYTENVAGLP 460 Query: 288 RGKRLSDHCPISIDYDF 304 SDH + + F Sbjct: 461 NMHFPSDHIFLGAKFAF 477 >gi|262273416|ref|ZP_06051230.1| hypothetical extracellular nuclease [Grimontia hollisae CIP 101886] gi|262222394|gb|EEY73705.1| hypothetical extracellular nuclease [Grimontia hollisae CIP 101886] Length = 936 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 46/385 (11%), Positives = 93/385 (24%), Gaps = 102/385 (26%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWK--------------NSVKRTTSDYT-------LL 57 +++ S+N+ N R D + Sbjct: 460 FEGTNLKVASFNVLNYFTSASAIGGDLNVTCDDQADADASNGCNRGAKDAAEFALQQAKI 519 Query: 58 RQYAKNLDADIVFLQEMGSYN-----AVAKVFPK---------NTWCIFYSTERLINHSK 103 +DADIV L E+ + A+A + + + + E + Sbjct: 520 VNALTAIDADIVGLMEVENNGFGDNGALANLVAELNAQFADSADHYAYVIPAEADLTEGA 579 Query: 104 RDSNNDIHTAIAVRKKNVRV-----------LQQSYPLLGAKDSFSRAGNRRAVELLVEI 152 ++ I A+ R V + S + R ++ + Sbjct: 580 FLGSDAIQVALIYRPARVELKGDARVIRMPEQHISGENPQGEIRQLDKFQRDSLMQTFSL 639 Query: 153 N-GKKIWVLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 N G+ + V H KS F D + + A+ L + + K Sbjct: 640 NHGETLSVAVSHFKSKGSGCYEDWVAGEFDDDPADLQGRCNAFRVSAAETLGNALADVKG 699 Query: 201 SLVPFVIAGDFNRKINYLGNN---------------------------DDFWKTIDPN-D 232 + GDFN D+ + + Sbjct: 700 D---VIALGDFNAYAKEDPIRLLTDYDADTAKRKIVTAAGTSVAGVTLDETAREVGDGFG 756 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + + +D+ + + + K + I E + R Sbjct: 757 YINLASEVLGDEAFSYTFDGELGSLDHALGNASVLKKMTGIEDWHINSVESSLFEYPSRF 816 Query: 293 -------------SDHCPISIDYDF 304 SDH P+ + + Sbjct: 817 TGDLVKSTNPYSSSDHDPVIVSLRY 841 >gi|190338709|gb|AAI63237.1| Smpd2 protein [Danio rerio] Length = 420 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 86/306 (28%), Gaps = 46/306 (15%) Query: 17 TASVAQKVRLVSWN---INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 K+R+ S N I LS+ Y ++ + DI LQE Sbjct: 2 APQQPGKLRVFSLNCWGIRFLSKL------------CAQRYEMIGELLGREQHDIALLQE 49 Query: 74 MGSYNAV----AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 + S K+ + + ++ + + + S + I A+ + Sbjct: 50 VWSERDFLFLKRKLSCSHPYTHYFKSGVIGSGLAVFSKHRIQDALLYQYSL-------NG 102 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 G + ++VE+ G K V HL + Q+ Sbjct: 103 YPYMLSHGDWFGGKAVGLVIVEVFGLKAHVYVTHLHA-----EYSRAQDGYLPHRIVQSW 157 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLG-----NNDDFWKTIDPNDSLIRFPKEKDSR 244 L+ ++ ++ GD N LG ++ D Sbjct: 158 ELQQFVRHTSHGADLVILGGDLNMHPQDLGNRLLRSHTGLRDCYTETDKFDGCEDGHTLI 217 Query: 245 CNANKN-------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N + I IDY +M + + ES S + D SDH Sbjct: 218 ANNHFTKKQDLIPFEKGIRIDYILMKGSQRVSVKCESLSTTKGSVSDKP---FPYSDHEA 274 Query: 298 ISIDYD 303 + D + Sbjct: 275 LMADLN 280 >gi|206968110|ref|ZP_03229066.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus AH1134] gi|228950924|ref|ZP_04113045.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229068121|ref|ZP_04201428.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185] gi|229176958|ref|ZP_04304353.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W] gi|206737030|gb|EDZ54177.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus AH1134] gi|228606433|gb|EEK63859.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W] gi|228714935|gb|EEL66803.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185] gi|228808651|gb|EEM55149.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 263 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 35/269 (13%), Positives = 73/269 (27%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 18 EKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGLLLLEELKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ + + ++ + +D+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK-TRKIVSTTIAYNGKDITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKGQVDRLMERVD----SNKLAFLMGDFNNNARLEG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +Q S Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQ---------S 233 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +SDH + + D Sbjct: 234 KKVHSSKVIFNGTNRNVISDHFGVEVQLD 262 >gi|68477573|ref|XP_717099.1| potential Endonuclease/Exonuclease/Phosphatase [Candida albicans SC5314] gi|68477734|ref|XP_717019.1| potential Endonuclease/Exonuclease/Phosphatase [Candida albicans SC5314] gi|46438715|gb|EAK98041.1| potential Endonuclease/Exonuclease/Phosphatase [Candida albicans SC5314] gi|46438798|gb|EAK98123.1| potential Endonuclease/Exonuclease/Phosphatase [Candida albicans SC5314] Length = 363 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 74/309 (23%), Gaps = 45/309 (14%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--- 79 +RL + NI ++ + R ++ + +I+ LQE+ Sbjct: 67 TLRLYTNNIRFDNKNYPDKYEQPWEIRKFQSINSMQFNTFQGNGNIICLQEVLHNQLIDI 126 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD---- 135 + + W + S + + + ++ L Sbjct: 127 LQGLNDIQEWNYYGVGRTDGEKSGEFAPILYKD-----QDFKIIENSTFWLSPTPHVPSK 181 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + A R + + +I + S L+ + + Sbjct: 182 GWDAALERIVTMVTFQSRLNPEIKFNIFNTHY--DHRGVEARRKSSQLIVDKMK------ 233 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR--FPKEKDSRCNANKNLRN 253 + P + GDFN + N + LI ++ Sbjct: 234 ---NYNDYPSFLCGDFNTEPNDEPYHILTKAGFKDGKILIDKKSAYGFETTFTGFDINNE 290 Query: 254 K-IPIDYFVMDQNAYKFLIQE------------------SFSEILYNEDDIKSRGKRLSD 294 IDY + + L + + G SD Sbjct: 291 PISRIDYIW-SPSFTRTLSNSENDTNQDSDDDNDNDKSYEVTLKQFGILSNWFNGHHFSD 349 Query: 295 HCPISIDYD 303 H P+ Y+ Sbjct: 350 HRPVVSTYE 358 >gi|168180262|ref|ZP_02614926.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum NCTC 2916] gi|182668813|gb|EDT80791.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum NCTC 2916] Length = 263 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 35/297 (11%), Positives = 88/297 (29%), Gaps = 52/297 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++++ N + ++ L + + D++ LQE+ + Sbjct: 1 MKILTLNCH-----------SWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKIL 49 Query: 84 FPKNTWCIFY------------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 F F + +++ + +A+ K+ ++S+ + Sbjct: 50 FDNIKEDNFAFILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHPIKEKKSFYIS 109 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 +KD R+ ++ ++ N I+ HL + D E+ Q L Sbjct: 110 KSKDKNFWK-TRKIIKCKIDYNNNPIYFYSCHL--GWWDDEEED--------FKSQVNKL 158 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----N 246 + ++ GD+N D+ D + + + Sbjct: 159 VQELK----EKETCILMGDYNNDAFLNNKGYDYLINKKLKDIYHLARSKDNGVTAIGDID 214 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K + +D + ++N + F+ I +SDH + + Sbjct: 215 GWKGNTKNMRLDLILSNKNLKVEYCKVIFNGIRKEI---------ISDHFGVEAKIE 262 >gi|150024176|ref|YP_001295002.1| exodeoxyribonuclease III [Flavobacterium psychrophilum JIP02/86] gi|149770717|emb|CAL42181.1| Exodeoxyribonuclease III [Flavobacterium psychrophilum JIP02/86] Length = 253 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 29/307 (9%), Positives = 87/307 (28%), Gaps = 81/307 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--- 80 ++++S+N+N + + + + + D++ LQE+ + Sbjct: 1 MKIISYNVNGIRA---------------AITKGFIDWLQAANPDVICLQEIKATQDQIPT 45 Query: 81 -AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 A + ++S + ++ +A+ K + G + Sbjct: 46 DAITAAGYPYQYYFSAQ-----------KKGYSGVAILCKTEP----KNIVFGTEIDHMD 90 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + ++ + ++ ++L S +++I K Sbjct: 91 FEGRN-----IRVDFDDLSIMSLYLPSGT--------NIERLDHKFMFMDDFQNYINNLK 137 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRC 245 + +I GD+N + ++ + + + Sbjct: 138 TKIPNLIICGDYNICHEAIDIHNPTQNAKTSGFLPEERAWLDAFIKSGFVDSFRHFNKEP 197 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + IDY ++ + + + + + SDHC Sbjct: 198 HHYSWWSYRAGARGNNKGWRIDYNLVSETLKERIKRAIIL-----------PDAKHSDHC 246 Query: 297 PISIDYD 303 P+ ++ + Sbjct: 247 PVLVEVE 253 >gi|59711773|ref|YP_204549.1| endonuclease/exonuclease/phosphatase family protein [Vibrio fischeri ES114] gi|59479874|gb|AAW85661.1| endonuclease/exonuclease/phosphatase family superfamily [Vibrio fischeri ES114] Length = 325 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 77/302 (25%), Gaps = 47/302 (15%) Query: 46 SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105 + + L++D++ QE+ S NA+ + + + F + + + Sbjct: 19 TQDEWQKKQGWFKDKITELNSDVIGFQEVFSPNALKALVDELGYAYFCTVDEPKSEDG-Y 77 Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLG-AKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164 N A A R + + NR V +E+ I + Sbjct: 78 VFNSPVVAFASRYPILNAQPVIAEQTQLERFGIEFEFNRIPVHASIELPHLGITDCYVVH 137 Query: 165 KSFCFLDSLENTYSPSCS--------------------LLSQQAQWLKDW-ITQKKESLV 203 E +A L + I Q+K++ Sbjct: 138 FKSQRPKEPEVNNEIDEESLSSLNQLHNEQLGSWLSTAQRGLEANILHNHIIQQRKKTNQ 197 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF------------------PKEKDSRC 245 V+ GDFN+ + + + + + + R Sbjct: 198 AIVVMGDFNKPLFHDEFKGLLSHELRFDKFSSDYLAQFQLKDSWNLYGKLKGIDLLEERT 257 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD------IKSRGKRLSDHCPIS 299 + +DY ++ + Y D + +DH +S Sbjct: 258 YTHYYGAKGSVLDYILLSNEFDSSFSGNILEVVDYTVTDKHIVNPTFDIDQFSTDHALVS 317 Query: 300 ID 301 I Sbjct: 318 IT 319 >gi|12852610|dbj|BAB29476.1| unnamed protein product [Mus musculus] Length = 278 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 84/287 (29%), Gaps = 35/287 (12%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78 A +R+ ++N+ + + + SV + Q DI +QE+ + Sbjct: 19 ATALRIGAFNVQSFGDNKVSDPDCGSV---------IAQILAGY--DIALVQEVRDPDLS 67 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 AV+ + + + + + RK V +Y +D Sbjct: 68 AVSLLMEQINRVSKHEYGFVSSKPLGRDQYKEMYLFVYRKDVASV-VSTYQYPDPED--- 123 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 A +R + + L + + +L + W Sbjct: 124 -AFSREPFVVKFSVPS----CATKELVLIPLHAAPHQAVAEIDALYDVYLDVIDKW---- 174 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + + DFN Y+ +D + ++ + N + D Sbjct: 175 --NTDDMLFLCDFNADCKYVKAHDWPSIRLRSSEVFKWLIPDSAHTTVGNSDCAY----D 228 Query: 259 YFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 V+ + L S S + E+ + + L SDH P+ + + Sbjct: 229 RIVVSGAHLRRSLKPHSASVHNFQEEFDLDQTQALAISDHFPVEVTF 275 >gi|322388347|ref|ZP_08061951.1| exodeoxyribonuclease [Streptococcus infantis ATCC 700779] gi|321141019|gb|EFX36520.1| exodeoxyribonuclease [Streptococcus infantis ATCC 700779] Length = 340 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 81/306 (26%), Gaps = 56/306 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + + Q +ADI+ +QE Sbjct: 66 MKLISWNIDSLNAALTSDSARAKLSQD------VLQTLVAENADIIAIQETKLSATGPTK 119 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K S+P +GA S + R Sbjct: 120 KHLEVLEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDSEGR 178 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +V ++ + ++ L + Sbjct: 179 I-----ITLEFDTFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAQL--------DKQK 225 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + + F Sbjct: 226 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEEREGFTNLLAKGFTDTFRHIHGDVPERY 285 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 286 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVSKSDMIDSGARQ-----------DHTPI 334 Query: 299 SIDYDF 304 ++ DF Sbjct: 335 VMEIDF 340 >gi|242004144|ref|XP_002422991.1| Recombination repair protein, putative [Pediculus humanus corporis] gi|212505907|gb|EEB10253.1| Recombination repair protein, putative [Pediculus humanus corporis] Length = 332 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 82/302 (27%), Gaps = 78/302 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 ++ SWN+ +L + +Y + D++ QE S Sbjct: 78 FKISSWNVVSLKSITNKNGM---------------EYVRRESPDVMCFQETKCSEKNAPS 122 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + +++ ++ +A+ K + + D+ R Sbjct: 123 ESKLPGYHRYFAAGVKEGYA----------GVALYSKLKPLSVKIGIGHKEHDTEGR--- 169 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 ++ + +++ ++ + + L +S Sbjct: 170 ------VITAEYEDFYLVTAYVPNAGRGLVTLPKRLKWDVAFKGYLKKL--------DSE 215 Query: 203 VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N N + D + + + F K ++ A Sbjct: 216 KPVILCGDLNVAHNEIDLKNPSTNTKTAGFTQEERDGFTKLLNAGFIDTFRKLYPNKEGA 275 Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +DYFV+ + + + +Y SDHCPI Sbjct: 276 YTYWNYIGNARSRNAGWRLDYFVVSERIMSTVCDSVIRKEVY-----------GSDHCPI 324 Query: 299 SI 300 ++ Sbjct: 325 TL 326 >gi|163745339|ref|ZP_02152699.1| hypothetical protein OIHEL45_07110 [Oceanibulbus indolifex HEL-45] gi|161382157|gb|EDQ06566.1| hypothetical protein OIHEL45_07110 [Oceanibulbus indolifex HEL-45] Length = 322 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 37/338 (10%), Positives = 92/338 (27%), Gaps = 64/338 (18%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++ + + A+ +R+ ++N LS + L ++ ++ + + Q + DI+ LQ Sbjct: 1 MLLASIAQAEPLRIATFNTE-LSRKGPGLLLRDILRGDDPSVSSVVQTISAANPDIIVLQ 59 Query: 73 EMG--------SYNAVAKVFPKNTWCIFYSTERLINHS-----------------KRDSN 107 + + A A + ++ Sbjct: 60 GIDYDLELSALTALADALTAAGAPYPYRFAAPPNAGRQSGVDLNGDGKLGGPRDAHGYGR 119 Query: 108 NDIHTAIAVRKKNVR----------VLQQSYPLLGAKDSFSRAGNRRAVELL-------- 149 A+A+ ++ ++ + P Sbjct: 120 FFGQGAMAILSRHPILTEDLQDFSTLIWRDLPSSLYPMIDGTPFAGAKAHATQRLSSNSH 179 Query: 150 ----VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 +E+ I +L H F + + + L I PF Sbjct: 180 WSLPIELPDGSITLLTYHATPPVFDGPEDRNGRRNHDETAFWVHHLAGEIGT--PPTHPF 237 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 ++ GD N D T+ + S+ + + + + +DY + ++ Sbjct: 238 ILLGDANLDPTRGDGRGDAITTLLAHPSIQDPLPDHPTVNWSQT---GPMRVDYLLPSRD 294 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + +G S H + +D Sbjct: 295 -WQVVDAGLIW----------PKGDTASRHALVWVDLT 321 >gi|145224965|ref|YP_001135643.1| endonuclease/exonuclease/phosphatase [Mycobacterium gilvum PYR-GCK] gi|145217451|gb|ABP46855.1| Endonuclease/exonuclease/phosphatase [Mycobacterium gilvum PYR-GCK] Length = 269 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 77/307 (25%), Gaps = 82/307 (26%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++LV++NI D LDADI+ LQE+ S A + Sbjct: 6 PMKLVTFNILHGRTPG-----------AEVDLDRFVDCVAGLDADILALQEVDSIQARSG 54 Query: 83 VFPKNTWCIFYSTER---------------LINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 + R + + + +A+ + V Q Sbjct: 55 LADLTALAAEAMGARSHRFVAAIAGTPGATWMAATGEEQPGTAAYGVALLSRYPAVSWQV 114 Query: 128 YPLLGAKDSFS------------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 L F R AV + ++ V + HL + Sbjct: 115 ARLPRIPFPFPLYLREPRKVVVVHEEPRAAVIGRFDTPLGELTVANTHLSFVPGWNRY-- 172 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 L + + P+++ GD N P Sbjct: 173 --------------QLHHLMRDVRGLPSPWIVTGDLNMPAK-------------PARRWS 205 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 R + R +D+ + D+ A + + +SDH Sbjct: 206 RLRCLASAPTFPA--DRPTRQLDHVLTDEPA-------------FTIRSYDTPEMAISDH 250 Query: 296 CPISIDY 302 P+ +D Sbjct: 251 RPLVVDL 257 >gi|291396737|ref|XP_002714939.1| PREDICTED: sphingomyelin phosphodiesterase 2, neutral-like [Oryctolagus cuniculus] Length = 423 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 39/296 (13%), Positives = 74/296 (25%), Gaps = 42/296 (14%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +N+N K + T L + D+ LQE+ S + Sbjct: 9 LRV--FNLNY-------WGIPYLSKHRAARLTRLGDFLNLESFDLALLQEVWSEQDFQYL 59 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP-----LLGAKDSFS 138 K + + + I + + V K+ + Sbjct: 60 KQKLS--------PTYPAAHYFRSGIIGSGLCVFSKHPIQDTTQHVYTLNGYPYMIHHGD 111 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + L++ ++G + HL + + QA L +I Sbjct: 112 WFCGKAVGLLVLHLSGLVVNAYVTHLHA-----EYSRQKDIYLAHRVAQAWELAHFIHHT 166 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-- 255 + ++ GD N LG W + + + + C Sbjct: 167 SKKADVVLLCGDLNMHPKDLGCRLLKEWTGLFDAYLEAQDFQGSEEGCTMVPGNCYVSQQ 226 Query: 256 ---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IDY + + I G LSDH + Sbjct: 227 DLKLFPCGIRIDYVLY-KAVPGLCISC--KTFRTTTGHDPHNGSPLSDHEALMATL 279 >gi|256847688|ref|ZP_05553133.1| exodeoxyribonuclease III [Lactobacillus coleohominis 101-4-CHN] gi|256715377|gb|EEU30353.1| exodeoxyribonuclease III [Lactobacillus coleohominis 101-4-CHN] Length = 275 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 79/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWNI+ S ++ T + D++ +QE Sbjct: 1 MKFISWNID--SINAALTGTSTRAGETRDVLHKIADLV----PDVIAIQETKLSKNGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ S + + + + SYP +GA + G Sbjct: 55 KHFTVLNELFPDYQVAWRSSVEPARKGYAGTMYLYRTGLTPKISYPQIGAPEPMDNEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V +++ + + Q L Sbjct: 114 -----MITLEFPYFFVTEVYTPNSGTGLRRLAERQIWDDRYREYLQQLDQ--------QK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + +GDFN + + + + F A Sbjct: 161 PVIASGDFNVAHEPIDLAHPENNHHSAGFTDEEREHFTKLLKAGFTDSFRHLHPEEKGAY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY+++ +++ S + DH PI Sbjct: 221 SWWAQRVITSKQNNSGWRIDYWLVSDRIADKVVKSSMIDTGARR-----------DHTPI 269 Query: 299 SIDYD 303 +D D Sbjct: 270 ELDID 274 >gi|148379569|ref|YP_001254110.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A str. ATCC 3502] gi|153934095|ref|YP_001383947.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A str. ATCC 19397] gi|148289053|emb|CAL83143.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A str. ATCC 3502] gi|152930139|gb|ABS35639.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A str. ATCC 19397] Length = 263 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 35/297 (11%), Positives = 88/297 (29%), Gaps = 52/297 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++++ N + ++ L + + D++ LQE+ + Sbjct: 1 MKILTLNCH-----------SWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKIL 49 Query: 84 FPKNTWCIFY------------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 F F + +++ + +A+ K+ ++S+ + Sbjct: 50 FDNIKEDNFAFILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHPIKEKKSFYIS 109 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 +KD R+ ++ ++ N I+ HL + D E+ Q L Sbjct: 110 KSKDKNFWK-TRKIIKCKIDYNNNPIYFYSCHL--GWWDDEEED--------FKFQVNKL 158 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----N 246 + ++ GD+N D+ D + + + Sbjct: 159 VQELK----EKETCILMGDYNNDAFLNNKGYDYLINKKLKDIYHLARSKDNGVTAIGDID 214 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K + +D + ++N + F+ I +SDH + + Sbjct: 215 GWKGNTKDMRLDLILSNKNLKVEYCKVIFNGIRKEI---------ISDHFGVEAKIE 262 >gi|91216089|ref|ZP_01253057.1| exodeoxyribonuclease [Psychroflexus torquis ATCC 700755] gi|91185606|gb|EAS71981.1| exodeoxyribonuclease [Psychroflexus torquis ATCC 700755] Length = 260 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 96/306 (31%), Gaps = 76/306 (24%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++++VS+N+N + + L + K DAD+V QE Sbjct: 5 EEMKIVSYNVNGIRA---------------ALKKGLIDWLKTTDADVVCFQE-------T 42 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K P+ + N + ++++ + K+ + G + Sbjct: 43 KAQPEQIDNSIFENIGYNNCYWYSAEKKGYSSVGILCKSEP----KHVEYGTGIDYMDRE 98 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + ++ + + ++ ++L S L K +I K+ Sbjct: 99 GRN-----LRVDFEDVSIMSLYLPSGTNDARLNYK--------FTYMDDFKVYIENLKKE 145 Query: 202 LVPFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRC 245 + P VI GD+N + +D K + + + F K + Sbjct: 146 IPPLVICGDYNICHEAIDIHDPVRLKTVSGFLPAEREWLSKFLKDSGFVDSFRKLNEDVV 205 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + +DY ++ + ++++ + SDHC Sbjct: 206 H-YSWWSYRANARQNNKGWRLDYLLV---------AQEIEDLVFRSVILPDAKH--SDHC 253 Query: 297 PISIDY 302 P+ ++ Sbjct: 254 PVLLEL 259 >gi|83645744|ref|YP_434179.1| beta-glucanase/beta-glucan synthetase [Hahella chejuensis KCTC 2396] gi|83633787|gb|ABC29754.1| Beta-glucanase/Beta-glucan synthetase [Hahella chejuensis KCTC 2396] Length = 1140 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 36/283 (12%), Positives = 78/283 (27%), Gaps = 56/283 (19%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 VR++++N+ T + + + + + + D++ LQE Sbjct: 910 GDSVRVMTFNVRTEQANDPGERN------WSHRKGEVVRTIQRQNPDLLGLQETTGGQ-- 961 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + N + + I R + L A Sbjct: 962 --------------YDFIKNTLGANWGATSYRQILYRSDRYTYVDGGLIDLVA----DVW 1003 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 G R A + N ++ I+ +S + + A L+D + + + Sbjct: 1004 GPRSAEWAKMRRNADGRELVFINTHWGVDGNSQQGS-----------ANILRDRLGEVNQ 1052 Query: 201 S-LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 + P V+ GD N N + N N++ +D+ Sbjct: 1053 NWGTPTVLLGDLNAIPGSGPVNTLVNQ--------TPLNSFFSGGTFNNWNVQAGDQLDH 1104 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + + SDH PI+ + Sbjct: 1105 V----------VGSRVNAAGCALETYREGDYPPSDHYPIACEL 1137 >gi|325263881|ref|ZP_08130614.1| endonuclease/exonuclease/phosphatase family protein [Clostridium sp. D5] gi|324030919|gb|EGB92201.1| endonuclease/exonuclease/phosphatase family protein [Clostridium sp. D5] Length = 351 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 43/322 (13%), Positives = 96/322 (29%), Gaps = 68/322 (21%) Query: 21 AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++++N G + S + ++ + K+ DADI FLQ Sbjct: 53 GESFTVLTYNTGYAGLSKDEDFFMDGGSKVQPESKELIENNLNGITSILKDQDADIYFLQ 112 Query: 73 EMGSYNAVAKVFPKNTWC---------------IFYSTERLINHSKRDSNNDIHTAIAV- 116 E+ + + + + + Y L K S T ++V Sbjct: 113 EVDRDSKRSYHIDEQEYYEQELGLPGMFACNFKVDYVPYPLPPIGKVTSGLVTMTGLSVS 172 Query: 117 -RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + S+P+ R ++ + K++ +++ HL+++ Sbjct: 173 KASRIALPESFSWPIKTCNLKRCMLETRIP----IKDSDKELVLINFHLEAY-------- 220 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK---INYLGNND-------DFW 225 S Q++ L + + + E + GDFN+ + +D Sbjct: 221 ---DSGEGKIAQSKLLAEKLASEYEKGNYVIAGGDFNQTFEGLETYPVHDKDSWVPGVIG 277 Query: 226 KTIDPNDSLIRFPKEKD------SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 K + P + N +D F++ N + ++ Sbjct: 278 KEVIPEGFSYAVANNAPTCRLLNGPYSGNYEDSQVYVLDGFIVSDNIEVSKVVNIDTDFE 337 Query: 280 YNEDDIKSRGKRLSDHCPISID 301 Y DH P+ ++ Sbjct: 338 YT------------DHQPVRVE 347 >gi|261193611|ref|XP_002623211.1| DNA lyase Apn2 [Ajellomyces dermatitidis SLH14081] gi|239588816|gb|EEQ71459.1| DNA lyase Apn2 [Ajellomyces dermatitidis SLH14081] Length = 629 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 78/331 (23%), Gaps = 71/331 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 VRL +WN+N + W R + + LDADIV QE + + Sbjct: 2 VRLTTWNVNGIRNPFSYHPW-----REKRSFEAM---FDALDADIVIFQETKIQKKDLQD 53 Query: 82 KVFPKNTWCIFYSTERLI---NHSKRDSNNDIHTAIAVRKKNV-RVLQQSYPLLGAKDSF 137 + N W F+S + + I A + P + Sbjct: 54 DMVLVNGWDCFFSLPKNSKCCPIRAEEGITGILCLPASVSPFPSPTSFRDLPEEAQIGGY 113 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS--LLSQQAQWLKDWI 195 A ++ + + + +F + + L + Sbjct: 114 PTAEQLALSDVDASTLDSEGRCMILEFPAFVLIGVYCPANRDETRDGFRTGFVNILDARV 173 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS---------------------- 233 ++ GD N + + + + N + Sbjct: 174 RNLVAMGKRVIVTGDLNICGSEIDSARALEEIRKGNLTDSEFVSAPVRRVFNQLVYGGKV 233 Query: 234 -------------LIRFPKEKDSRCNANKNL---------RNKIPIDYFVMDQNAYKFLI 271 + K R IDY + D+ + Sbjct: 234 IGDRDQGRETPILVDLCRKYHPDRPGMYTCWEQRVNARPGNYGSRIDYVLCDKRMEDWFS 293 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + G SDHCP+ D Sbjct: 294 ASNIQ-----------EGLMGSDHCPVFADL 313 >gi|92115234|ref|YP_575162.1| endonuclease/exonuclease/phosphatase [Chromohalobacter salexigens DSM 3043] gi|91798324|gb|ABE60463.1| Endonuclease/exonuclease/phosphatase [Chromohalobacter salexigens DSM 3043] Length = 271 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 31/288 (10%), Positives = 81/288 (28%), Gaps = 54/288 (18%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQYAKNLDADIVFLQEM 74 +RL++ N+ + + L+ + D DIV LQE+ Sbjct: 14 HSLRLLTCNLQVGIHTSAYHHYLTRSWQHVLPHPKRQGRLDLIGDTLR--DYDIVGLQEV 71 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + + + + + N + + + + Sbjct: 72 DGGSFRSGHVNQVEYLA-----KRGGFPHHYQQLNRNLGRVAQHSNGLLSRLTPRQVDEY 126 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R A+ + ++ HL ++Q +L + Sbjct: 127 RLPGTLPGRGAIHARFGEGPDALHLVVAHLALGH-------------RTRTRQLDYLSEI 173 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 I L V+ GD N + + + F + + + + + + Sbjct: 174 IQ----PLRHVVVMGDLNCTPDQINAHQRFCHALPLHPVAMPL---------SYPAWQPR 220 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D+ ++ + + + + SDH P+++D Sbjct: 221 RALDHILISSALHA--------------ERFEVLDRLFSDHLPVAVDI 254 >gi|30018623|ref|NP_830254.1| exodeoxyribonuclease III [Bacillus cereus ATCC 14579] gi|218231797|ref|YP_002365209.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus B4264] gi|228956830|ref|ZP_04118615.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229042269|ref|ZP_04190021.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676] gi|229125865|ref|ZP_04254890.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4] gi|229143158|ref|ZP_04271590.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24] gi|296501195|ref|YP_003662895.1| exodeoxyribonuclease III [Bacillus thuringiensis BMB171] gi|29894164|gb|AAP07455.1| Exodeoxyribonuclease III [Bacillus cereus ATCC 14579] gi|218159754|gb|ACK59746.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus B4264] gi|228640239|gb|EEK96637.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24] gi|228657523|gb|EEL13336.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4] gi|228727060|gb|EEL78265.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676] gi|228802871|gb|EEM49704.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pakistani str. T13001] gi|296322247|gb|ADH05175.1| exodeoxyribonuclease III [Bacillus thuringiensis BMB171] Length = 263 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 35/269 (13%), Positives = 73/269 (27%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 18 EKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ + + ++ + +D+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK-TRKIVSTTIAYNGKDITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKGQVDRLMERVD----SNKLAFLMGDFNNNARLKG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +Q S Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQ---------S 233 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +SDH + + D Sbjct: 234 KKVHSSKVIFNGTNRNVISDHFGVEVQLD 262 >gi|57168378|ref|ZP_00367512.1| exodeoxyribonuclease III [Campylobacter coli RM2228] gi|305432793|ref|ZP_07401952.1| exodeoxyribonuclease III [Campylobacter coli JV20] gi|57020186|gb|EAL56860.1| exodeoxyribonuclease III [Campylobacter coli RM2228] gi|304444190|gb|EFM36844.1| exodeoxyribonuclease III [Campylobacter coli JV20] Length = 252 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 79/304 (25%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + + D + QE+ A Sbjct: 1 MKLLSWNVNGLRAICDKNA---------------LDWIIKENIDFIGFQEI---KAHEDK 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FPK + + + + ++ + +++ + F R Sbjct: 43 FPKKIYEYPFKHMYSNSAKRA-----GYSGVMSLCNFDSEVKK-------CEFFDDEEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++E K I + +I+ + + + + + L Sbjct: 91 -----VLEHRFKNIALFNIYFPNGQKDEERLSFKMKFYAKFLVYLEKLLK-------DGF 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GD N L + + + F + Sbjct: 139 EIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFIDTFREINGDIKEKY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + L + ++ SDH P+ Sbjct: 199 SWWSYRMKARERNVGWRIDYFFISTGLKDKLKNAFIRDDIF-----------GSDHAPVG 247 Query: 300 IDYD 303 I+ D Sbjct: 248 IEID 251 >gi|319944723|ref|ZP_08018987.1| hypothetical protein HMPREF0551_1835 [Lautropia mirabilis ATCC 51599] gi|319741972|gb|EFV94395.1| hypothetical protein HMPREF0551_1835 [Lautropia mirabilis ATCC 51599] Length = 484 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 97/311 (31%), Gaps = 54/311 (17%) Query: 42 LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH 101 ++ + + L + + DIV +QE+ +AV +V K + Sbjct: 176 GPQHRRQDLDAKVRQLAELVRTARPDIVLMQEITDADAVRQVLGKGWTIHTTAERWNGGP 235 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK----- 156 ++ T +++ V V++ L + R AV L + + K Sbjct: 236 ISQNLAVAWPTHRFLQEPRVEVVES---LARSSPEGRRTRPGLAVYLPLPVPEKPSGTPP 292 Query: 157 --------IWVLDIHLKSFCFL----------DSLENTYSPSCSLLSQQAQWLKDWITQK 198 + +L++HLK+ C + + SC L Q L+ W+ ++ Sbjct: 293 KAARPAPTLAILNVHLKAGCRQGRLDRSLSRQPTRQWRRLSSCQTLQSQVPALEGWLDRQ 352 Query: 199 KESLVPFVIAGDFNRKI----------------------NYLGNNDDFWKTIDPNDSLIR 236 + +I+GDFNR + + +D R Sbjct: 353 MAAGHAVLISGDFNRDLRQELRQGLPARGDGSPAAAPIRTSDEMRRVASVLPELDDDQPR 412 Query: 237 FPKEKDSRCNANKNLRNK-IPIDYFVMDQNAYKFLIQES----FSEILYNEDDIKSRGKR 291 + + L ID F++ N +L + + R R Sbjct: 413 GTRLTLVASGPYRKLARCHHHIDVFLLSHNLDAWLRTPPEDLRVQVVPFEAPLSLER-PR 471 Query: 292 LSDHCPISIDY 302 SDHCP + Sbjct: 472 PSDHCPHVLQL 482 >gi|221221062|gb|ACM09192.1| Deoxyribonuclease gamma precursor [Salmo salar] Length = 331 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 82/288 (28%), Gaps = 33/288 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78 +++ S+N+ L S + L + ++ + E+ Sbjct: 1 MKVASFNVRRLGT---------SKVNDKNVLKYLIKIVSRYS--VLLILEVVDRTGKAMA 49 Query: 79 -AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + ++ T RD+ + R+ +V++ SY K Sbjct: 50 MFLKELNDTRANKKHPYTMVKSPRLGRDTYKEQFV-FLYRQDHVKLT-HSYQYKDNKVGD 107 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 A R L + L + DS++ + + +W Sbjct: 108 EDAFAREPYILRFTCLNTVLKDLVLIPVHTKPEDSVKELDKLYDVVKVVKKKW------- 160 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 +I GDFN +Y+ D I ++ + N I Sbjct: 161 ---KTDHIMILGDFNADGSYVTKGDMTNIRIRSDEKFHWVIGDDVDTTANTSNDHTYDRI 217 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYD 303 + + ++ S +++ S+ L SDH P+ ++ Sbjct: 218 --VMYGDDMLNAMVPNSAKPFNFHKAFRLSKAMALSISDHYPVEVELT 263 >gi|289741285|gb|ADD19390.1| transcriptional effector CCR4-related protein [Glossina morsitans morsitans] Length = 352 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 85/294 (28%), Gaps = 19/294 (6%) Query: 20 VAQKVRLVSWNI---NTLSEQEGVSLWKNSVK-RTTSDYTLLRQYAKNLDADIVFLQEMG 75 + RLVS+NI + L E + +S L+ + L DI+ LQEM Sbjct: 66 APNQFRLVSYNILAQDLLVEHLQLYQGIHSKLLHWEHRLEKLKSELEILQPDILCLQEMQ 125 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 YN + + + +R AI + ++ D Sbjct: 126 -YNHLKSFVQELSHKRKVEYIFKKKTGRRTDG----CAIIYDRNKFKLDDDQCVEYYTND 180 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + A+ ++ + + E+ +L + L + Sbjct: 181 VATLNRENVAIMAKFQVRNDPSTEFIVATTHLLYNPRREDVRISQVGVL---LRALASFA 237 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + K S +P ++AGDFN + + + S + + Sbjct: 238 IRSKHSRLPTILAGDFNFTPDTDAYKCLVTQRKFNEYLFQMESIDFGSDAVS-TFQDEWV 296 Query: 256 PIDYFVMD------QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +DY + ++ + + SDH ++I + Sbjct: 297 TVDYILKSIAEDKEKSITIESTYKLPTAESCMNIGKIPNTFLGSDHFSLAISFS 350 >gi|222149124|ref|YP_002550081.1| hypothetical protein Avi_2877 [Agrobacterium vitis S4] gi|221736109|gb|ACM37072.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 277 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 36/289 (12%), Positives = 86/289 (29%), Gaps = 55/289 (19%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + + + + S+N++ +G D + + + D++ LQE Sbjct: 34 PAGSPGLLVASYNVHKCVGVDGRF-----------DPERVLHVIREIGPDVIALQEADQR 82 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + + ++ + + ++ V + L G Sbjct: 83 FGDRTGLLDLARLQGEAGLTRVPVAGLPKSHGWRGNVLLFREGVVRNVHPFVLPGL---- 138 Query: 138 SRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R AV ++ G+++ ++ HL + QQA ++ + Sbjct: 139 ---EPRGAVVAEIDLDGGRELRIIAAHLGLLRW-------------ARRQQADFILKLMR 182 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 ++ + P V+ GDFN G+ ++ + + Sbjct: 183 ERADC--PTVLMGDFNEWRVGPGSALTRFEPLFGPLPPPVPSFPARLPV---------LA 231 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI--SIDYD 303 +D + ++ I + + SDH P+ ID D Sbjct: 232 LDRIMTNRPGL----------IADMQVHDSPLARLASDHLPLKAWIDLD 270 >gi|115378897|ref|ZP_01466034.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca DW4/3-1] gi|115364103|gb|EAU63201.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca DW4/3-1] Length = 1080 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 40/299 (13%), Positives = 80/299 (26%), Gaps = 43/299 (14%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 P +++ + ++N+ L + L T ++ DADI+ LQ Sbjct: 182 ASPGALPPPEELTVATFNV--LFDLHEAELLD-----TPRRIPAALSLLRSADADIIALQ 234 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ A + ++ + + + Sbjct: 235 EVTEPFLRALLETPWIREHYFL------SEGPGAATVTPYGQLLLSRFPFASLSQCVFSR 288 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 K + + + G +WV +HL S S S + Q + + Sbjct: 289 DKR---------VIAGEIRLKGGTLWVATLHLTSHRAH--------ASSSSRAAQLRAIV 331 Query: 193 DWITQKKESL---VPFVIAGDFNRKINYLGNND-------DFWKTIDPNDSLIRFPKEKD 242 W V+AGDFN + + D W + P + F E++ Sbjct: 332 GWANALGTQGLHSPDVVLAGDFNFSEDAPEGHAFAQHGFTDVWPLLRPGEPGYTFDPERN 391 Query: 243 SRCNANKNLRNKIPIDYFVM---DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +D ++ + L + SDH + Sbjct: 392 GLATVMTVSGRRQRLDRVLVRSPSGRLTPRAVTLFGETPLPAPEAPAGGPLFTSDHFGV 450 >gi|305666513|ref|YP_003862800.1| hypothetical protein FB2170_09596 [Maribacter sp. HTCC2170] gi|88708780|gb|EAR01015.1| hypothetical protein FB2170_09596 [Maribacter sp. HTCC2170] Length = 314 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 43/318 (13%), Positives = 94/318 (29%), Gaps = 63/318 (19%) Query: 2 IRKYVLALVFFLV-----------PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT 50 ++++L+ L+ + + + + + I T + + + Sbjct: 39 KKQFLLSFSIVLLGYFTQSTFFKTSSSNNETEDLDIG---ILTFNTHGSMGTKWSREPVF 95 Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 D + ++ D+DIV +QE K F + + + + Sbjct: 96 AED---ITRFIAKEDSDIVCIQEFDYKKV--KDFKRYPYKYVNYIFPNQKYVVQS----- 145 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 + K + + S ++++ A+ + I + V ++HL+S F Sbjct: 146 -----ILSKYPIIEKGSLDFPDSRNN--------AIYADILIKKDTVRVYNLHLQSLRFR 192 Query: 171 DSLENTY------SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 + L +Q + + +I GDFN N Sbjct: 193 AGMIKREEPQRLFKRLNGSLQKQLEQAELVKEHGNNVDYKKIICGDFNNTQFSNVYNSIK 252 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + D F ++ N ID+ +MD+ Sbjct: 253 GEMNDS------FQEKGSGFGNTYNFRFLPFRIDFILMDKEI--------------EITS 292 Query: 285 IKSRGKRLSDHCPISIDY 302 K+ +LSDH P+ + Sbjct: 293 HKNFNIQLSDHEPVMASF 310 >gi|67481873|ref|XP_656286.1| endonuclease/exonuclease/phosphatase domain containing protein [Entamoeba histolytica HM-1:IMSS] gi|56473475|gb|EAL50900.1| endonuclease/exonuclease/phosphatase domain containing protein [Entamoeba histolytica HM-1:IMSS] Length = 320 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 37/314 (11%), Positives = 88/314 (28%), Gaps = 41/314 (13%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + +R++++N+ + + R + D DI+ QE+ Sbjct: 13 KPIRILTYNMYLRPMLISAAGHDHKDSRLKVFCKE-----RLKDFDIICFQEVFKELNWR 67 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + R+ + + + V Q + L Sbjct: 68 REKLLKKAKKAGFKYRIQTEKPLFPLFLCDAGLIIISRFPIVENQ-FKLYKRSIYADAVA 126 Query: 142 NRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-TQKK 199 ++ + +EI + K + V + H ++ LD PS + Q + ++ + Sbjct: 127 SKGVLYAKIEIQSNKYLHVFNTHTQADYTLDPE--KAKPSRDVRLSQIRKYAKFVQKKCN 184 Query: 200 ESLVPFVIAGDFNRK-------INYLGNNDDFWK------------TIDPNDSLIRFP-- 238 P + GDFN +F + + N + Sbjct: 185 NDTFPVICCGDFNVNGRAGTDGTTESPEYTEFLQNFHFDSGELIDLLLRDNHGIQPVTFG 244 Query: 239 ------KEKDSRCNANKNLR----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 ++ C+ +K +DY + + + + + + Sbjct: 245 DSFIDENGTETPCDTEITYEVSCMDKSRLDYMFHWKKPNENPVITCKNCRVDKFQVSGKK 304 Query: 289 GKRLSDHCPISIDY 302 +SDH ++ D Sbjct: 305 YPFMSDHFGVTCDI 318 >gi|315186595|gb|EFU20354.1| exodeoxyribonuclease III Xth [Spirochaeta thermophila DSM 6578] Length = 256 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 33/306 (10%), Positives = 79/306 (25%), Gaps = 80/306 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81 V + SWN+N + + L + + +I+ LQE + + Sbjct: 2 VSVYSWNVNGIRA---------------AAKKGLLDWIEKERPEILCLQETKARRDQLPS 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + + +++ +S + L + + Sbjct: 47 ELARPDGYHTYWAEADKPGYSGVA---------------LFTLYEPVSVEPLGVEAFDRE 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + + + + + C+ +K+ + Sbjct: 92 GR-----TLIADFGSFVFFGCYFPNSQEAGARLDYKLAYCN-------AVKERADAYVAA 139 Query: 202 LVPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 +I+GDFN YL ++ + + F + Sbjct: 140 GRHVLISGDFNIAHTPLDLARPEANEKNPGYLPEEREWMTYFLSSGYVDTFRMFTKEGGH 199 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDY +++ + + + SDHCP Sbjct: 200 -YTWWTYRFKAREKDIGWRIDYHCVNEGFKDKVKESVIL-----------KNVMGSDHCP 247 Query: 298 ISIDYD 303 + I D Sbjct: 248 VKITLD 253 >gi|297160401|gb|ADI10113.1| hypothetical protein SBI_06993 [Streptomyces bingchenggensis BCW-1] Length = 255 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 35/259 (13%), Positives = 69/259 (26%), Gaps = 32/259 (12%) Query: 62 KNLDADIVFLQEMG---SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVR 117 + D++ LQE+ N + + ++ + + I AV Sbjct: 6 RRHARDVLGLQEVWADGDENLAGWLAQRLGMHWTWAASDSPQKWQHRIGDPTIDFGNAVL 65 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + + L A R A+ LV+ HL N Sbjct: 66 SRWPIAERDVARLPAAGGPDD---GRLALYALVDAPSHPAPFFTTHL----------NAD 112 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLV-PFVIAGDFNRKINYLGNN-------------DD 223 ++ Q L +I +++ + P V+ GD+N + Sbjct: 113 LHESAVRCAQVTALARFIAERRGAGPFPPVVTGDYNAWPDSDEMRLLGGCRTAPAVPGQV 172 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + D + + + + IDY + L S + Sbjct: 173 LLDVWEYADPAAPWATWDAANPYVARTFEPSVRIDYIHVGPPGPDGL-GHVRSVRRAGDG 231 Query: 284 DIKSRGKRLSDHCPISIDY 302 + G SDH + + Sbjct: 232 PVDEVGVWPSDHAAVVAEL 250 >gi|297849552|ref|XP_002892657.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis lyrata subsp. lyrata] gi|297338499|gb|EFH68916.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis lyrata subsp. lyrata] Length = 444 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 37/300 (12%), Positives = 80/300 (26%), Gaps = 53/300 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+N+ E ++L + + ++ QE+ + + Sbjct: 176 LKILSYNV-WFREDLELNL----------RMRAIGHLIQLHSPHLICFQEVTPE--IYDI 222 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F K+ W YS + + + + +S+ + R Sbjct: 223 FRKSNWWKAYS---CSVSVDVAVSRGYYCMLLSKLGVKSFSSKSF--------GNSIMGR 271 Query: 144 RAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 VE+ GK + HL+S C +QA+ + + Sbjct: 272 ELSIAEVEVPGGKPLVFATSHLESPCPGPPKW--DQMFSRERVEQAKEAIEILR----PN 325 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPND----SLIRFPKEKDSRCNANKNLRNKIPID 258 + GD N G K +D + + F + + + N + +D Sbjct: 326 TNVIFGGDMNWDDKLDGKFPLADKWVDVWEVMKPGDLGFTYDTKANPMLSGNRALQKRLD 385 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---------------LSDHCPISIDYD 303 + + S K SDH + + Sbjct: 386 RILCR---LDDYKLGGIEIVGKEAIPGLSYEKEKKVRGEIKKLELPVLPSDHFGLLLTLS 442 >gi|297160067|gb|ADI09779.1| hypothetical protein SBI_06659 [Streptomyces bingchenggensis BCW-1] Length = 298 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 37/282 (13%), Positives = 69/282 (24%), Gaps = 49/282 (17%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAK 82 R+ ++N+ + S D + ++ L+E +G + Sbjct: 59 RVANFNVCN--------PCRGSNPLYHVD--QIVDQIVKYRPQVIGLEEICVGETQRLIG 108 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + +N A+ + + + Sbjct: 109 KLRAKGYRYYAAHGSQLNTRWGCHEFGSAYGSAILSAAPLTNKVNRHYSQGG-----SEP 163 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R V + + GKK+ V HL S S+ Q L + + Sbjct: 164 RGYVAVDTTVAGKKVRVFATHL-----------AQSGQASVRKVQVGELIKAVRAYPQ-- 210 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI--PIDYF 260 ++ GDFN + N W D + C ++ R DY Sbjct: 211 --VIVLGDFNAEPNASEM-SPMWSKFHDADPACSPTQYLR-PCKMTEDSRRPGGKKFDYI 266 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + SDH I D Sbjct: 267 FLRNGGAFSSSSVGV-------------NGNFSDHNLIYADL 295 >gi|118462542|ref|YP_883226.1| endonuclease/exonuclease/phosphatase [Mycobacterium avium 104] gi|118163829|gb|ABK64726.1| endonuclease/exonuclease/phosphatase [Mycobacterium avium 104] Length = 252 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 68/303 (22%), Gaps = 82/303 (27%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-------- 78 ++NI + LR + LD D++ LQE+ Sbjct: 2 ATFNILHGRTVGDGVI-----------VERLRDCIRRLDPDVLSLQEVDCDQPRSEHADL 50 Query: 79 --AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-----TAIAVRKKNVRVLQQSYPLL 131 A A+ + + + D IA+ + Q L Sbjct: 51 TGAAAEAMGAVEHRFVAAISGTPGATWMAATGDEQPGTAAYGIALLSRYPVASWQVLRLP 110 Query: 132 GAKDSFS------------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 F R AV + ++ V + HL + Sbjct: 111 RIPMRFPMYLPGPNRVMIVDEEPRAAVIAQLRTPIGELTVANTHLSFVPGWNR------- 163 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + L+ I + P ++ GD N + Sbjct: 164 ---------RQLRRLIRDLRGLPGPRLLTGDLNMTPQTVRRWSGMRAL------------ 202 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 +D+ + + + +SDH P+ Sbjct: 203 ---GNAKTFPADNPNRQLDHIL-TDDRRLRCAAVQADLMP------------ISDHRPLV 246 Query: 300 IDY 302 +D Sbjct: 247 VDL 249 >gi|152974192|ref|YP_001373709.1| endonuclease/exonuclease/phosphatase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152022944|gb|ABS20714.1| Endonuclease/exonuclease/phosphatase [Bacillus cytotoxicus NVH 391-98] Length = 263 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 38/298 (12%), Positives = 88/298 (29%), Gaps = 54/298 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTT-SDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++++ N + + L + + + D++ LQE+ Sbjct: 1 MKVLTLN------------CHSWQEENQLEKIKYLAKTIQEENYDVIALQEVSQSIKAQS 48 Query: 83 VFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 V+ F ++ + A+ K+ + + S+ + Sbjct: 49 VYGNKKKDNFGLILLAELKQLGLENYSMVWDFAHIGYDIYEEGSAIITKHPIIKRGSFFV 108 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 +KD+ R+ V + GK I HL ++ +Q Sbjct: 109 SESKDTTYWK-TRKIVYATIFYQGKNITFYSCHLGW----------WNDEEEPFREQVNR 157 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + I + S + GDFN + G D+ + D+ ++ + K Sbjct: 158 FMEHIDDHELS----FLMGDFNNNAHLRGEGYDYMIQNNFYDTYALAMEKDEGTTVQGKI 213 Query: 251 LRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID + ++ F + F+ + +SDH + + + Sbjct: 214 AGWDENKQNLRIDLVLSNKPVKVFSSKVIFNGMNRKI---------ISDHFGVEVQLN 262 >gi|288931161|ref|YP_003435221.1| exodeoxyribonuclease III [Ferroglobus placidus DSM 10642] gi|288893409|gb|ADC64946.1| exodeoxyribonuclease III [Ferroglobus placidus DSM 10642] Length = 253 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 89/305 (29%), Gaps = 80/305 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N + KR + L+ + DI+ +QE + Sbjct: 2 LKVCTYNVN------------SIRKRLHIVFPLMEKV------DILCMQE---TKVEDRK 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + + S +A+ K S Sbjct: 41 FPEADFHL-------KGYHVVFSGGKARNGVAIASKFE---------PDEYFSGINGEKD 84 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + K+WV++++ ++S Y + LK+++++ + Sbjct: 85 RVIAARF----GKLWVINVYAPQGQSIESEYYRYKLEF------FKKLKEFLSEFVDFKG 134 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 +++ GD N + + +K I + ++ + Sbjct: 135 YYLLCGDMNVAPEDIDVHSPDKLRNHVCFHEDVKKAFKEIVQLGFVDVL-RKHHPKERIY 193 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +D+ + + + + + SDH P+ Sbjct: 194 TFYDYRVRDAVKRGLGWRVDHILATEKLAEKSKDCYVLLEYRTTE-------KPSDHVPL 246 Query: 299 SIDYD 303 +++ Sbjct: 247 VAEFE 251 >gi|255723798|ref|XP_002546828.1| hypothetical protein CTRG_01133 [Candida tropicalis MYA-3404] gi|240134719|gb|EER34273.1| hypothetical protein CTRG_01133 [Candida tropicalis MYA-3404] Length = 309 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 49/313 (15%), Positives = 96/313 (30%), Gaps = 34/313 (10%) Query: 5 YVLALVFFLVPCTASV----AQKVRLVSWNINTLSEQEGVSLWK-NSVKRTTSDYTLLRQ 59 +L ++ F V + + N+ + + S + + +R ++ Sbjct: 14 LLLGIILFTVLPLTISEIQGSTDFTIYDHNVRYAASRIKRSSKELSWSERKNGVINAIKS 73 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRK 118 K+ +V LQE + N + + + D ++ I ++ Sbjct: 74 ETKDY-PSLVGLQETDLSQLKDILQGLNEDESISNNWKYYGCGRNDGKEKGEYSPILYKE 132 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGN-----RRAVELLV--EINGKKIWVLDIHLKSFCFLD 171 + +++ S L R +GK + L+ HL Sbjct: 133 SDWKLISGSTKWLSLTPDKPSKYPGADKNRIVTITTFMHRSSGKVVNFLNTHLDH----- 187 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S A + D+I Q P + GDFN K D T+ + Sbjct: 188 -------KSKEAREYSANLISDYIKQ-LPHKFPTFLIGDFNSK-ESDVAYDIISDTMLDS 238 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVM--DQNAYKFLIQESFSEILYNEDDIKSRG 289 + + + + + ID+ ++Y + S++ I D+ G Sbjct: 239 SKVSEIVSGSELDTFSGFGNKKEFNIDFIWSFNSSDSYSTVTPTSYTVI----DNYMENG 294 Query: 290 KRLSDHCPISIDY 302 R SDH PI Y Sbjct: 295 YRFSDHRPIVARY 307 >gi|146298594|ref|YP_001193185.1| exodeoxyribonuclease III Xth [Flavobacterium johnsoniae UW101] gi|146153012|gb|ABQ03866.1| exodeoxyribonuclease III Xth [Flavobacterium johnsoniae UW101] Length = 253 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 33/303 (10%), Positives = 82/303 (27%), Gaps = 73/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+N+N + + ++ + D++ LQE+ + Sbjct: 1 MKIISYNVNGIRA---------------AITKGFIEWLQAASPDVICLQEIKATQD---- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ +A+ K + D R Sbjct: 42 ---QIPVEAITAAGYPYQYYYPATKKGYSGVAILSKIEPQKVVYGTGIHHMDFEGR---- 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + V+ ++L S +D + +I + K S+ Sbjct: 95 -----NLRADFDDVSVMSLYLPSGTNID--------RLDHKFMFMDDFQTYINELKISIP 141 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249 +I GD+N + +D I + + + Sbjct: 142 NLIICGDYNICHEAIDIHDPVRNKTVSGFLPEERAWLDAFMKSGFIDSFRHFNKDPHHYS 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY ++ L + + SDHCP+ + Sbjct: 202 WWSYRAGARGNNKGWRIDYNLVSNAIEHRLKRAVILPDAVH-----------SDHCPVLV 250 Query: 301 DYD 303 + + Sbjct: 251 EIE 253 >gi|81884455|sp|Q6AXQ5|PDE12_RAT RecName: Full=2',5'-phosphodiesterase 12; Short=2'-PDE; Short=2-PDE gi|50927785|gb|AAH79396.1| Phosphodiesterase 12 [Rattus norvegicus] gi|149015723|gb|EDL75071.1| similar to CG31759-PA [Rattus norvegicus] Length = 608 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 79/314 (25%), Gaps = 33/314 (10%) Query: 24 VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R VS+NI S L+++ +AD++ LQE+ Sbjct: 294 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDR 353 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + P R+ H + + + L + Sbjct: 354 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFRLLSQHDISFQEALKSDPLHKEL 413 Query: 136 SFSRAGNRRAVELLVEINGK-KIWVLDIHLKSF---CFLDSLENTYSPSCSLLSQQAQW- 190 A N A E +++ + +I VL S C ++ + + Q Sbjct: 414 LEKLALNPLAQEKVLQRSSVLQISVLQSTTDSSKKICVANTHLYWHPKGGYIRLIQMAAA 473 Query: 191 --LKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPNDSLIR 236 ++ +P + GDFN + + D + + Sbjct: 474 LVHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSVPEDHEDWASNGEEERCGMSL 533 Query: 237 FPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGK 290 K N +DY +D + S Sbjct: 534 THCFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQALPSVS 593 Query: 291 RLSDHCPISIDYDF 304 SDH + D + Sbjct: 594 HPSDHIALVCDLKW 607 >gi|84500676|ref|ZP_00998925.1| exodeoxyribonuclease III, putative [Oceanicola batsensis HTCC2597] gi|84391629|gb|EAQ03961.1| exodeoxyribonuclease III, putative [Oceanicola batsensis HTCC2597] Length = 262 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 29/308 (9%), Positives = 72/308 (23%), Gaps = 75/308 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAV 80 L +WNIN L+ ++ + D++ LQE S Sbjct: 2 PFTLATWNIN----------------SVRLREPLVLRFLQEEAPDVLCLQECKSPVDKIP 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + F + + +A+ K + Sbjct: 46 REAFSDLGYTHMI-----------ARGQKGYNGVAILSKMPIEDVGDRDFAALGHARH-- 92 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + +E + + + ++ + D + + ++DW ++ Sbjct: 93 -----IAGRLENG---VTIHNFYVPAG--GDKPDREVNVKFGQKLDYLTGMRDWFHAERP 142 Query: 201 SLVPFVIAGDFNRKINYLGN--NDDFWKTID-------------PNDSLIRFPKEKDSRC 245 V+ GD N + + + + ++ + Sbjct: 143 EKA--VLVGDLNIAPREDDVWNHKQLLRIVSHTPIEVEHLGQTQDAGKWVDITRKDIPQG 200 Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 N + +D+ + ++ SDH Sbjct: 201 NLYSWWSYRSPDWDAADKGRRLDHVWATPDIANAGHSS-------RILRHIRGYEQPSDH 253 Query: 296 CPISIDYD 303 P+ +D Sbjct: 254 APVLATFD 261 >gi|224477773|ref|YP_002635379.1| hypothetical protein Sca_2291 [Staphylococcus carnosus subsp. carnosus TM300] gi|222422380|emb|CAL29194.1| hypothetical protein SCA_2291 [Staphylococcus carnosus subsp. carnosus TM300] Length = 228 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 66/222 (29%), Gaps = 33/222 (14%) Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQ------------------SYPLLGAKDSFSRAG 141 N +I V+ + P ++ + Sbjct: 2 NKDGGQPGANIRVGFLYNPNRVQFDSKIKPGDANTAVSYQKGNLTRNPGRIDPNNPAFID 61 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ 197 +R+ + + GK++ + H S D+L P S + A+ + ++TQ Sbjct: 62 SRKPLAAQFKFRGKQVIAIANHWNSKNGDDALFGKNQPVNLGSEKQRVEIAKAVSRFVTQ 121 Query: 198 KK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 K V GDFN KT++ N + + N Sbjct: 122 VKQDNPKANIVALGDFNDFQWSQP-----LKTLEGNQMTDLVNSVPQNERYSYVYQGNSQ 176 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 +D+ V+ N S ++++ D R SDH P Sbjct: 177 SLDHVVVSNNLA----PHSKLDMVHVNSDFTDMSGRASDHDP 214 >gi|237786239|ref|YP_002906944.1| exodeoxyribonuclease III [Corynebacterium kroppenstedtii DSM 44385] gi|237759151|gb|ACR18401.1| exodeoxyribonuclease III [Corynebacterium kroppenstedtii DSM 44385] Length = 262 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 33/300 (11%), Positives = 76/300 (25%), Gaps = 60/300 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N + + D D++ +QE Sbjct: 1 MRLATWNVN----------------SVRTRLPRIIDVLNRHDIDVLAMQETKCSED---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S + +A+ + + P A Sbjct: 41 ------QFPRDAFTDAGYEVAVSGTNQWNGVAIASRVGLTDVHTLPHQPGFSKELTAEQ- 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + I V+ +++ + + ++ TY + ++++ ++ Sbjct: 94 AIEPRSIAATCGGIIVMSLYIPNGREISNIHFTYK------LRFLDAVRNYAATAVDNDP 147 Query: 204 --PFVIAGDFNRKINYLGNNDDFW------------KTIDP--NDSLIRFPKEKDSRCNA 247 + GD+N + D + + ++ Sbjct: 148 ELRLALVGDWNIAPHDTDVWDPQFFVGHTQVTPRERNALTALEDEGFTDVTHNSGYTYWD 207 Query: 248 NKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 R + ID + + S + K SDH P+ +DYD Sbjct: 208 YTAGRFGRNQGMRIDVQWASPALAENAGEVSV-------YKDERAAKGSSDHAPLIVDYD 260 >gi|227550110|ref|ZP_03980159.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecium TX1330] gi|227180754|gb|EEI61726.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecium TX1330] Length = 293 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 83/310 (26%), Gaps = 66/310 (21%) Query: 24 VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++++ N + L E+ + Q + D++ LQE+ + Sbjct: 20 MKIMTLNTHSWLEEEP------------QEKLKQIAQKICHEQYDVIALQEVNQTMDAKR 67 Query: 83 V----------------FPKNTWCIFY--------STERLINHSKRDSNNDIHTAIAVRK 118 + + + T A+ Sbjct: 68 LTSEQLKNFSQVQEQTPVRSDNFAYCLIQLLAEQGETYYWSWEMSHIGYAIYEEGNALLS 127 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K L L+ R+ + + + I V H + S Sbjct: 128 KQP--LTSQTHLVSETKEKEDYHTRKILVGQTSVKTQCITVASCHFSWWVDEKSG----- 180 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + + L+ + P + GDFN G + + D+ Sbjct: 181 -----FAFEWKELEASL---APLTTPLYLLGDFNNPAEGSGYDLVAKSQLPIRDAYPIAQ 232 Query: 239 KEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 K++ + +N + + IDY + Q+ + Y G +S Sbjct: 233 KKQAEATIEKRIDGWENNKEGLRIDYIYVPQDCF---------VTSYQRIFDGENGPIVS 283 Query: 294 DHCPISIDYD 303 DH +++ + Sbjct: 284 DHYGVAVTLE 293 >gi|150866588|ref|XP_001386237.2| hypothetical protein PICST_49245 [Scheffersomyces stipitis CBS 6054] gi|149387844|gb|ABN68208.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 318 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 44/308 (14%), Positives = 80/308 (25%), Gaps = 43/308 (13%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 R+ S N+ + V + KR + + IV LQE+ + Sbjct: 22 TFRIYSHNVKNGGHKALVPGEEPWTKRFRKITASI--HFNAQRDSIVCLQEVYKFQLNDI 79 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD------S 136 + N + + I ++ ++ L K+ Sbjct: 80 MKELNRYSPNEDWKYYGVGRIDGMELGEFVPIIYKESEWELVFSDSLWLNEKNTRSSLTG 139 Query: 137 FSRAGNRRAVELLVEINGKK--IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R + ++ G + I V + HL E + S L+ Q + + W Sbjct: 140 WDAQYPRIVSYVTMKHKGSENYINVFNTHL-----DHVGEKSKIGSVKLIGQTMKSINSW 194 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-- 252 P + GDFN + + D + F + + + Sbjct: 195 ---------PSFLCGDFNTEPDDAAFKQLEESFSDVSTLSTPFNRYGHEKSSVTGFEGEV 245 Query: 253 ---NKIPIDYFV---MDQNAYKFLIQESFSEILYNEDDIKS-----------RGKRLSDH 295 IDY +S G +SDH Sbjct: 246 LLQGGQSIDYIFAPKYTAKMSDKPQCDSIDVNSAANKLFLRLQGFGMLHSKFGGSYMSDH 305 Query: 296 CPISIDYD 303 PI D+ Sbjct: 306 RPIVADFS 313 >gi|1487952|emb|CAA59746.1| ANGEL 39 [Drosophila melanogaster] Length = 354 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 80/303 (26%), Gaps = 29/303 (9%) Query: 18 ASVAQKVRLVSWNI-------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 ++VS+NI L G+ S L + LD DI+ Sbjct: 62 PHKCSSFKVVSYNILAQDLLLEHLFLYVGIPHEFLS---WQRRQQNLLRELLKLDPDILC 118 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 LQEM + V + ++ AI +L Sbjct: 119 LQEMQFDHLPVLVQRLRMGNGKKLAYVYKKKTGCRTDG---CAIVYDSSKFELLDHQAVE 175 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 L + + A+ ++ K F + + + Q + Sbjct: 176 LYDQAVALLNRDNVALFARFRFKKQQ-----EQQKEFVVATTHLLFNTKRSDVRCAQVER 230 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL---IRFPKEKDSRCNA 247 + + + + P V+ GDFN + K D + + + DS Sbjct: 231 ILEELQSF-STDTPIVLTGDFNSLPDSSPIEFLVGKNGDVDSTACPEPLHFEIIDSGEGT 289 Query: 248 NKNLRNKIPI-DYFVMDQNAYKFLIQESFSEILYNEDDI------KSRGKRLSDHCPISI 300 +N+ I DY + + S + + SDH + Sbjct: 290 ASTYQNEWVIVDYILRSLGSRSRHKLLPLSVYSLPSINRCIGAGQIPNYRLGSDHYALGA 349 Query: 301 DYD 303 + Sbjct: 350 VFT 352 >gi|331265838|ref|YP_004325468.1| exodeoxyribonuclease III [Streptococcus oralis Uo5] gi|326682510|emb|CBZ00127.1| exodeoxyribonuclease III [Streptococcus oralis Uo5] Length = 275 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 78/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K S+P +GA S R Sbjct: 55 KHLEILEELFQGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDLEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +V ++ + + ++ L + Sbjct: 114 I-----ITLEFDTFFVTQVYTPNAGDGLKRLDERQVWDVKYAEYLAEL--------DKEK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPECY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 VLEIE 274 >gi|326495490|dbj|BAJ85841.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 460 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 45/351 (12%), Positives = 92/351 (26%), Gaps = 83/351 (23%) Query: 16 CTASVAQKVRLVSWNI---NTLSEQEGVSLWKNSVK-RTTSDYTLLRQYAKNLDADIVFL 71 + S + ++S+NI N + L R S L+ ++ D+D+V L Sbjct: 83 ASTSGSDACTIMSYNILADNNARNHPDLYLDVPWDALRWDSRRRLIIHEIRHWDSDLVCL 142 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 QE+ + +A + + R + A + + +R+L++ Sbjct: 143 QEVDRFREIAAEMKSKGYECSF--------KGRTGDAKDGCATFWKSERLRLLEEDSIDF 194 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 N A L+ E+NG + +VL + + Q + L Sbjct: 195 SE----FNLRNNVAQVLVFELNGTQKFVL---------GNIHVLFNPKRGDVKMGQIRML 241 Query: 192 KDWITQKKES--LVPFVIAGDF-------------------------------------- 211 + +P V+AGDF Sbjct: 242 LERANALAGKWDGIPIVLAGDFNSTPESAIYKFLSTMKLNVSLHDRRQLSGLDSSEFGLY 301 Query: 212 ----NRKINYLGNNDDFWKTIDPNDSLIR--------------FPKEKDSRCNANKNLRN 253 N + + + + + + + Sbjct: 302 CSLLNFEWSDEEVRNATGSSNVMVARHPLKLSSSYAMLKGNSSNRGHHGEPLATSYHKKF 361 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +DY + ++ + SDH PI ++ F Sbjct: 362 LGTVDYLWYTPGLECSRVLDTLPVDALKRTRGLPTREMGSDHLPIVAEFIF 412 >gi|313679171|ref|YP_004056910.1| endonuclease/exonuclease/phosphatase [Oceanithermus profundus DSM 14977] gi|313151886|gb|ADR35737.1| Endonuclease/exonuclease/phosphatase [Oceanithermus profundus DSM 14977] Length = 353 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 39/317 (12%), Positives = 88/317 (27%), Gaps = 61/317 (19%) Query: 24 VRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + L++WNI G W + + + K+ AD+V +QE+ Sbjct: 56 LSLLTWNIGYAGLGAEQDFFLDGGTHGWPGRAE-VERYLAGIAAHLKDRPADVVLIQEVD 114 Query: 76 --------SYNAVAKVFPKNTWCIFYSTER---LINHSKRDSNNDIHTAIAVRKKNVRVL 124 A+A + + + + + + + Sbjct: 115 LASRRSYGINEALALARALPDYAFVLAKNYDVAFVPVPVARPMGRVKSGLMTLSRWRPAA 174 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF--CFLDSLENTYSPSCS 182 + + L G R + + + + + + N+ + Sbjct: 175 AERHALPG----------RYGFLVQLVQLDRAFVLTRYPAADGRDWVVINTHNSAFDAGQ 224 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 L QQ ++K+ +T++ V+ GD+N + + + F + + FP++ Sbjct: 225 LREQQLGYIKEVMTREYARGNYVVVGGDWNLILPGVDPDAAFAHSEPRPGFYLPFPEDWT 284 Query: 243 SRCNANKNL-----------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 ID F++ N + Sbjct: 285 PAGWTWAYDARTPTNRSVSRPWRPGENYVTVIDGFLVSPNVEVQEV------------RT 332 Query: 286 KSRGKRLSDHCPISIDY 302 + G SDH P+ + Sbjct: 333 EDLGFASSDHNPVRVRL 349 >gi|312882321|ref|ZP_07742065.1| putative phospholipase C precursor [Vibrio caribbenthicus ATCC BAA-2122] gi|309370034|gb|EFP97542.1| putative phospholipase C precursor [Vibrio caribbenthicus ATCC BAA-2122] Length = 430 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 41/296 (13%), Positives = 91/296 (30%), Gaps = 33/296 (11%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 S + ++S+N LS ++S L+ + +N D+VF+QE+ Sbjct: 156 SSVESQENTIDIISYNTWMLSHIGQKMETRDS---------LIAKEVRNH--DVVFMQEV 204 Query: 75 GSYNAVAKVFPKN-TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 ++ + + S + S + K V Q + Sbjct: 205 FRSENEKEIKSTMGDYFNYTSDKLNGGGSNTYDG-----GVITFSKYPIVEQNQHVFDNC 259 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 K + A + + + + + + ++HL S+ + Q + Sbjct: 260 KGTDCAAD-KGVLYTKIVKDNQNYHLFNLHLGSW--------DTQQHRDVRILQLGEIFV 310 Query: 194 WITQ-KKESLVPFVIAGDFN-RKINYLGNNDDFWKTIDPNDS----LIRFPKEKDSRCNA 247 ++ P +I GDFN K + + + + +D + + + Sbjct: 311 FMQSLNLPDDEPIIIGGDFNINKHKFPLDYMQMLRILGVSDPELIGELIYSYDPLLNNFF 370 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + DY + N + + D LSDH I+ ++ Sbjct: 371 TPSEEGRERFDYLLYVDNGAILDSNSQIKAL-RSFDQSIWGTWDLSDHFAINANFT 425 >gi|149914631|ref|ZP_01903161.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. AzwK-3b] gi|149811424|gb|EDM71259.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. AzwK-3b] Length = 210 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 39/244 (15%), Positives = 60/244 (24%), Gaps = 44/244 (18%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + L AD+V LQE+ A + L S A+ VR Sbjct: 2 RVINALQADVVVLQEVDKRLAPRPAALPHDMVEEEGWHILPFGQPGGSLGWHGNAMLVRD 61 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + L G R A+ ++ + V+ +HL Sbjct: 62 GVQAIETAHIELPGL-------EPRGAIRADLDTPIGALRVIGLHLGLV----------- 103 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 Q + + Q +P V AGDFN N + L Sbjct: 104 --RRYRLLQLGAINRALRQLPP--MPTVFAGDFNEWGNGA----ALDAAVKLVRFLPAAA 155 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + R P+D + + SDH P+ Sbjct: 156 --------SYPAPRPVAPLDRIALSPDLLALSSGV----------HRGRPAHIASDHLPV 197 Query: 299 SIDY 302 D Sbjct: 198 WADL 201 >gi|313887924|ref|ZP_07821603.1| exodeoxyribonuclease III [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846090|gb|EFR33472.1| exodeoxyribonuclease III [Peptoniphilus harei ACS-146-V-Sch2b] Length = 275 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 76/305 (24%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++SWNI++++ + + R + D DI+ +QE Sbjct: 1 MKIISWNIDSINAALTSDSNRAQMSR------EVLATILREDPDIIAIQETKLPKGGPSK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 K ++ + S + + K ++P + A D+ G Sbjct: 55 KHKEILAEMFADYDYVFVSSEEPARKGYAGNMAFFKKGLEPTVTFPKIDAPDTMDFEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++ ++ + + L + Sbjct: 114 -----IITLEFDDFFLTQVYTPNAGGELKRLPLRQIWDEKYGEYLSSLDEI--------K 160 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GDFN + + F Sbjct: 161 PVIATGDFNVAHKEIDLANPDGNRMSAGFTDEERQGFTNLLDRGFTDTFRHIHGDVEGVF 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDYF++ + + + DH PI Sbjct: 221 TWWAQRVKTSKINNSGWRIDYFIVSDRIKDLVKDSKMIDSGERQ-----------DHTPI 269 Query: 299 SIDYD 303 +D + Sbjct: 270 LLDIN 274 >gi|221056961|ref|XP_002259618.1| endonuclease [Plasmodium knowlesi strain H] gi|193809690|emb|CAQ40391.1| endonuclease, putative [Plasmodium knowlesi strain H] Length = 2507 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 41/381 (10%), Positives = 96/381 (25%), Gaps = 91/381 (23%) Query: 15 PCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++V + +++WN+ E + + T + Q N DI+ LQ Sbjct: 2124 STVSNVNNQFTIMTWNVLAEIYGTIEAFPHCDPYMLAWSYRKTKIIQEILNNSPDIICLQ 2183 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLI---------NHSKRDSNNDIHTAIAVRKKNVRV 123 E+ + + + P + + + AI KK ++ Sbjct: 2184 EIQNEHFLDFFKPSLGELGYEGVYKQKTKEIFTSPSGKRRGGKYTIDGCAIFYNKKKLKF 2243 Query: 124 LQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGKKIWVLDIHLKSFCF------- 169 ++ + ++ + + + +L +++ + Sbjct: 2244 VETYALEFSKLIKEASVFTLPKEVQKNPSLVKRLLKDNVALVILLEYIQQYSKMYDSKEE 2303 Query: 170 ------------LDSLENTYSPSCSLLSQQAQWLKDWIT-------QKKESLVPFVIAGD 210 ++ + + QAQ L + +K E++ +I GD Sbjct: 2304 GVEKPNKNLIIVANTHIVANPEANYVKIWQAQILVKVVEYLRINFIKKYETIPSLIICGD 2363 Query: 211 FNRKINYLGNNDDFWKTIDP------NDSLIRFPKEKDS--------------------- 243 FN + + KT +D Sbjct: 2364 FNSTPSSAVYQLIYKKTCSRSHEDFSSDKYSLLTDLPLGHNLNLKSAYAISKLLSQKLNP 2423 Query: 244 -----------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK-- 290 N +DY + + + ++ + Sbjct: 2424 EEYSSKMEIFEPLFTNYTGNFIGCLDYIFYNDENLNIISTVNIADENQLMQEAHIYQLSN 2483 Query: 291 -------RLSDHCPISIDYDF 304 R SDH P+ ++F Sbjct: 2484 CALPSPIRPSDHLPLIAKFEF 2504 >gi|134093450|ref|YP_001098525.1| putative nuclease [Herminiimonas arsenicoxydans] gi|133737353|emb|CAL60396.1| Putative Nuclease [Herminiimonas arsenicoxydans] Length = 259 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 39/308 (12%), Positives = 76/308 (24%), Gaps = 80/308 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VA 81 +++VS N+N + + Q+ AD + +QE+ + A Sbjct: 2 LKIVSANLNGIRSAAKKGFF---------------QWMARHSADYICVQELKAQEADMTP 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + ++ +S +G A Sbjct: 47 DFLTPEGYFGYFHYAEKKGYSGAGVYCKTKPDNV--------------QIGFNCPEFDAE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R V+ + + V+ ++ S + + + L K Sbjct: 93 GRY-----VQCDFGNLSVISVYCPSGSSGEERQQAKFRFMDVFLPHLLEL-------KSQ 140 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 FVI GD+N N + + D + + + Sbjct: 141 GREFVICGDWNIAHNEIDLKNYKGNRKNSGFLPEEREWLTRVFDEVGLVDVYRRLHPGTT 200 Query: 246 NA-NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 N+ IDY V + + +R SDH Sbjct: 201 EECYTWWSNRGQAYAKNVGWRIDYQVATPSLAARAHAAEI-----------YKVERFSDH 249 Query: 296 CPISIDYD 303 P++I Y Sbjct: 250 APLTITYT 257 >gi|313891277|ref|ZP_07824895.1| exodeoxyribonuclease III [Streptococcus pseudoporcinus SPIN 20026] gi|313120344|gb|EFR43465.1| exodeoxyribonuclease III [Streptococcus pseudoporcinus SPIN 20026] Length = 275 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 82/305 (26%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + R + + DADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTGESPRALLSR------AVIDRLVSEDADIIAIQETKLSATGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 T ++ + S + + K ++P +GA + G Sbjct: 55 KHLETILSYFPNYLHVWRSSVEPARKGYAGTMFLYKQTLNPVVTFPEIGAPTTMDSEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +V ++ + + L ++ Sbjct: 114 -----IITLEFEDFFVTQVYTPNAGDGLRRLADRQEWDIKYADYLTQL--------DAQK 160 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N + + F N Sbjct: 161 PVLATGDYNVAHKEIDLANPSSNRRSAGFTDEERAGFTALLEKGFTDTFRHLHGDLPNVY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ +++ + + DH PI Sbjct: 221 TWWAQRSKTSKMNNTGWRIDYWLTSNRIADKVLKSEMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 LLEID 274 >gi|254459775|ref|ZP_05073191.1| endonuclease/exonuclease/phosphatase [Rhodobacterales bacterium HTCC2083] gi|206676364|gb|EDZ40851.1| endonuclease/exonuclease/phosphatase [Rhodobacteraceae bacterium HTCC2083] Length = 329 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 83/314 (26%), Gaps = 49/314 (15%) Query: 39 GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + L + +DAD + + E + R Sbjct: 17 DTCWSGRRGVKRADQAKALGHVFQRIDADAIMVIEAPDDHQHRSGTRALENFAKAYDLRS 76 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA------------------ 140 +N IA+ ++ P+ D Sbjct: 77 SKALIGFTNTTQQE-IALLYDPTKLTATHDPIGALGDPVPPFNETYQIDLDIDNRADSVR 135 Query: 141 GNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSL-----ENTYSPSCSLLSQQAQWLKDW 194 ++ +EL +E G + ++ HLKS + + QA WL+ Sbjct: 136 FSKPPLELAIETAAGNNLRMIGAHLKSKAPHGAHNAAEVMRFSIANRRKQLAQAVWLRAR 195 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--------------TIDPNDSLIRFPKE 240 + + ++ ++ GD N + F + DP+ + K Sbjct: 196 VEEHLDAGEALMVLGDLNDGPGLDEYENLFGRSSVEIILGEIGCPCLYDPHAARALKRKI 255 Query: 241 KDSRCNANKNLRNKIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 + L+ +DY ++ + + + R Sbjct: 256 GGEPTTSRFFLKKDNRYLQALLDYIMVSDDLRYKAKTWRIWHPFDDPECWVDLKLRDALL 315 Query: 292 -LSDHCPISIDYDF 304 SDH P+++D DF Sbjct: 316 TASDHFPVTLDLDF 329 >gi|262274349|ref|ZP_06052160.1| hypothetical protein VHA_001324 [Grimontia hollisae CIP 101886] gi|262220912|gb|EEY72226.1| hypothetical protein VHA_001324 [Grimontia hollisae CIP 101886] Length = 361 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 42/352 (11%), Positives = 91/352 (25%), Gaps = 74/352 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAVAK 82 +R ++N+ S +++ T Y + +++ D++ L E Sbjct: 8 LRFATFNVAM-SADAPGDIFRELKAGTHRRYAHIAAIIQHIQPDVLLLCEFDHPGQGGDD 66 Query: 83 VFPKNTWCIFYSTERLINHSKRDSN------------------------------NDIHT 112 + R + + Sbjct: 67 GMLAYFQQAYLEKPRCGQPAIHYPFQYAPPTNTGLAVCNGEDVATLPERAHGFGRHHGQY 126 Query: 113 AIAVRKKNVRVLQ--QSYPLLGAKDSFSRAGNRR----------------AVELLVEING 154 V + L+ +S+ LG R + L V ++ Sbjct: 127 GFVVLSRYPLDLENLRSWQTLGWASYPDSKMPRAYFAGKGLGSLRLSSKNHIALPVIVHD 186 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKKE------SLVPFV 206 K I ++ H F + + Y + L ++ D++ PFV Sbjct: 187 KVIQLVACHPTPPVFDGTEKRNYKRNADELRLLHDIVRGADFLVDDAGKAGGLTPSQPFV 246 Query: 207 IAGDFNRKI-NYLGNNDDFWKTIDPN---------DSLIRFPKEKDSRCNANKNLRNKIP 256 + GD N N G+++ + +D D +R + Sbjct: 247 VMGDLNADPVNGDGDHNAIRQLLDDAKIQDVKPESDGAEAALLHAHTRRKRQATHHRGLR 306 Query: 257 IDYFVMD------QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +DY + + ++ L + + SDH + +D Sbjct: 307 LDYVLPSIHFNVLDAGVFWPNPDNLLGHLIHNHKGNAVASHSSDHRLVWVDL 358 >gi|49083150|gb|AAT50960.1| PA5488 [synthetic construct] Length = 293 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 35/294 (11%), Positives = 79/294 (26%), Gaps = 62/294 (21%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 ++RL+S+NI E + + ++ + + D D+V L Sbjct: 30 PDDGRLRLLSFNIQVGISTERYRHYLTRGWQHLLPHAGRATNLKRIGELLA--DYDLVAL 87 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVLQQSY 128 QE + + + + I + R + + Sbjct: 88 QEADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRNLGRIAQHSNGLLSRWRPTLLEDHPL 147 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 P R A+ + + V+ +HL ++Q Sbjct: 148 PGPPG---------RGAIFVRFGEGADALVVVMMHLALG-------------ARTRTRQL 185 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++++ I V+ GD N + N L Sbjct: 186 AYIRELIGDY----RHQVLMGDMNTHAVD----------LLENSPLRDLGLMAPQVEATF 231 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + R + +D+ ++ + + + +SDH P+S++ Sbjct: 232 PSWRPQRNLDHILLSSDLALERVDV--------------LDQPISDHLPVSVEI 271 >gi|294657164|ref|XP_459475.2| DEHA2E03454p [Debaryomyces hansenii CBS767] gi|199432491|emb|CAG87693.2| DEHA2E03454p [Debaryomyces hansenii] Length = 618 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 87/315 (27%), Gaps = 47/315 (14%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 R+ S N+ VS + +R + T + IV LQE+ + Sbjct: 314 QPLNFRVYSHNVKNGGHDILVSGERTWAERVNNIATSIA--FNARHDTIVALQEVYKFQL 371 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDI--HTAIAVRKKNVRVLQQSYPLLGAKDS- 136 + N + E + R +I I + ++ L KD Sbjct: 372 DNILSELNRYSPPNKPEWAAYGAGRIDGRNIGEFVPILYKTSEWELVFSDTMWLNDKDPR 431 Query: 137 -----FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + R + ++ + + ++ F E + S S++ Q+ + Sbjct: 432 VSLEGWDAKYLRICSYVTLK-HKRTENYFNVFNTH--FDHVGELSRIGSASMIVQKMNEI 488 Query: 192 KDWITQKKESLVPFVIAGDFNRKINY------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 W P + GD N + + D K + K + Sbjct: 489 NKW---------PSIFCGDLNAEPKERTYQLITEDYKDVSKLTTAFNRY-GHTKSSVTGF 538 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS-----------------R 288 L+ IDY + QE + +D Sbjct: 539 EGEVLLQGGQNIDYIFA-PGYTTKVSQEDDCDKQSTPEDSPDANLSLKLQAFAMLHSKFN 597 Query: 289 GKRLSDHCPISIDYD 303 G +SDH P+ D+ Sbjct: 598 GAYMSDHRPLVADFT 612 >gi|60729594|pir||JC7951 deoxyribonuclease I (EC 3.1.21.1) - common carp Length = 279 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 94/307 (30%), Gaps = 36/307 (11%) Query: 3 RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 K + A+ LV + + + ++NI + +S + ++ + Sbjct: 1 MKIITAIGLLLVSV--HLGHSLLIGAFNIKSFG---------DSKASNATLLDIITKVVH 49 Query: 63 NLDADIVFLQEMGSYN--AVAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 DIV +QE+ + A K+ N Y + +++ S R+ Sbjct: 50 RY--DIVLIQEVRDSDLTATNKLMQSVNGGSSPYEYQYIVSEPLGRSTYKERYLFIYRRP 107 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 V V G + + NR ++ N + + Sbjct: 108 AVSVANSFQYDDGCESCGTDTFNREPFVVMFSSNTAVQQKFALVPQHTSP---------- 157 Query: 180 SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + + L D + ++ + ++ GDFN +Y+ N+D + + S Sbjct: 158 --EVAVTEIDALHDVVLDTRQRLNTNNIMLLGDFNAGCSYVSNSDWSKIRLRTDQSYTWL 215 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDH 295 + + N D V + K + S + + S+ L SDH Sbjct: 216 IPDSADTTVTHTNCPY----DRIVATSDMMKGVSAGSAQVFDFMQAHGLSQSWGLAVSDH 271 Query: 296 CPISIDY 302 P + Sbjct: 272 FPAEVQL 278 >gi|70993420|ref|XP_751557.1| transcription factor [Aspergillus fumigatus Af293] gi|74671761|sp|Q4WQG5|CCR4_ASPFU RecName: Full=Glucose-repressible alcohol dehydrogenase transcriptional effector; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase gi|66849191|gb|EAL89519.1| transcription factor, putative [Aspergillus fumigatus Af293] Length = 696 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 40/361 (11%), Positives = 90/361 (24%), Gaps = 72/361 (19%) Query: 15 PCTASVAQKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + KV ++S+N S Q V L+ ++ D+DI+ LQ Sbjct: 318 SSSNHRTDKVTVLSYNTLCDSSATQSHYGYAPARVLSWEFRRELILNELRSHDSDIICLQ 377 Query: 73 EMG----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 E+ + ++ + +++ R + + D+ A + +L + Sbjct: 378 EIDQGSYNEYFREQLAYNDYKGVYWPRGRAMGMQEEDAKCVDGCATFFKGSKFILLDKQL 437 Query: 129 PLLGAK-----------DSFSRAGNRRAVELLV----EINGKKIWVLDIHLKS------- 166 G D ++R + + ++V G + V++ HL Sbjct: 438 INFGQTAVRRPDAKGQDDIYNRLWQKDHIAVVVFLENRQTGARFIVVNAHLYWDPAFKDV 497 Query: 167 -----------------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 C + + + + + Sbjct: 498 KLIQTAILMEELTKLSETYAKWPPCTDKAAFRFSKEEGQSETPPLEEPAPSMQYASGDQI 557 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRC--- 245 P ++ GD N N + + F + Sbjct: 558 PLLMCGDLNSSPGSAAYNLIAHGRLDEEHPDLEKRLYGNLSKVGMTHPFKLKSAYGAIGE 617 Query: 246 --NANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N K +DY + + + + SDH + ++ Sbjct: 618 LPFTNYTPDFKDILDYIWYSSNSLHVSALLGEVDKDYLQRVPGFPNYHFPSDHIALLAEF 677 Query: 303 D 303 Sbjct: 678 T 678 >gi|22331849|ref|NP_191415.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] gi|75248588|sp|Q8W0Z9|CCR4A_ARATH RecName: Full=Carbon catabolite repressor protein 4 homolog 1; Short=CCR4 homolog 1 gi|18087604|gb|AAL58932.1|AF462845_1 AT3g58560/F14P22_150 [Arabidopsis thaliana] gi|22137046|gb|AAM91368.1| At3g58560/F14P22_150 [Arabidopsis thaliana] gi|332646278|gb|AEE79799.1| carbon catabolite repressor protein 4-like 1 [Arabidopsis thaliana] Length = 602 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 43/349 (12%), Positives = 86/349 (24%), Gaps = 64/349 (18%) Query: 18 ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 ++S+NI +T + + S T L + ADIV LQE+ Sbjct: 242 PLSMGTFTVLSYNILSDTYASSDIYSYCPTWALAWTYRRQNLLREIVKYRADIVCLQEVQ 301 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + P+ + + + N + A + R + Sbjct: 302 NDHFEEFFLPELDKHGYQGLFKRKTNEVFIGNTNTIDGCATFFRRDRFSHVKKYEVEFNK 361 Query: 136 --------SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY---------- 177 + + A+ LV+ N I VL+ S + + Sbjct: 362 AAQSLTEAIIPVSQKKNALNRLVKDNVALIVVLEAKFGSQAADNPGKRQLLCVANTHVNV 421 Query: 178 -SPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNN------------DD 223 + Q L + + + +P ++ GDFN + D Sbjct: 422 PHELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNTVPASAPHTLLAVGKVDPLHPDL 481 Query: 224 FWKTIDPNDSLIRFPKEKD-----------------------------SRCNANKNLRNK 254 + + + N Sbjct: 482 MVDPLGILRPHSKLTHQLPLVSAYSQFAKMGGNVITEQQRRRLDPASSEPLFTNCTRDFI 541 Query: 255 IPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +DY + + E E +D + SDH + ++ Sbjct: 542 GTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 590 >gi|17137276|ref|NP_477204.1| angel [Drosophila melanogaster] gi|17366486|sp|Q24239|ANGEL_DROME RecName: Full=Protein angel; AltName: Full=Angel 39; Short=ANG39 gi|7291622|gb|AAF47045.1| angel [Drosophila melanogaster] gi|16182602|gb|AAL13530.1| GH06351p [Drosophila melanogaster] gi|220944986|gb|ACL85036.1| angel-PA [synthetic construct] gi|220954812|gb|ACL89949.1| angel-PA [synthetic construct] Length = 354 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 80/303 (26%), Gaps = 29/303 (9%) Query: 18 ASVAQKVRLVSWNI-------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 ++VS+NI L G+ S L + LD DI+ Sbjct: 62 PHKCSSFKVVSYNILAQDLLLEHLFLYVGIPHEFLS---WQRRQQNLLRELLKLDPDILC 118 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 LQEM + V + ++ AI +L Sbjct: 119 LQEMQFDHLPVLVQRLRMGNGKKLAYVYKKKTGCRTDG---CAIVYDSSKFELLDHQAVE 175 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 L + + A+ ++ K F + + + Q + Sbjct: 176 LYDQAVALLNRDNVALFARFRFKKQQ-----EQQKEFVVATTHLLFNTKRSDVRCAQVER 230 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL---IRFPKEKDSRCNA 247 + + + + P V+ GDFN + K D + + + DS Sbjct: 231 ILEELQSF-STDTPIVLTGDFNSLPDSSPIEFLVGKNGDVDSTACPEPLHFEIIDSGEGT 289 Query: 248 NKNLRNKIPI-DYFVMDQNAYKFLIQESFSEILYNEDDI------KSRGKRLSDHCPISI 300 +N+ I DY + + S + + SDH + Sbjct: 290 ASTYQNEWVIVDYILRSLGSRSRHKLLPLSVYSLPSINRCIGAGQIPNYRLGSDHYALGA 349 Query: 301 DYD 303 + Sbjct: 350 VFT 352 >gi|294643629|ref|ZP_06721431.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294808048|ref|ZP_06766821.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|292641006|gb|EFF59222.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294444689|gb|EFG13383.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] Length = 297 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 39/337 (11%), Positives = 79/337 (23%), Gaps = 75/337 (22%) Query: 1 MIRKYVLALVFFLVPCTASVAQ-----------------------------KVRLVSWNI 31 M + + L+ F+ AS + +R+ ++N+ Sbjct: 1 MKKIVIYTLITFIFSVFASSCEDNKDNSLYYPDFTWDTGDGEEDEDPVTETSMRVATYNL 60 Query: 32 NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----SYNAVAKVFPKN 87 + T+ + Q ++ D +I +E SY Sbjct: 61 Q-----------VETGTGWTNRRERVAQLIRDYDFEICGFEEASWEQRSYLGTQLASDYQ 109 Query: 88 TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE 147 T N + S + R P + + R V Sbjct: 110 ILAYGRDTGNDDNKAGEMSGILYKKSRYTLLDAGRFWFSETPEIPSNGWDETNFKRFCVW 169 Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207 + + + ++ Q L D ++ K + P Sbjct: 170 GKFKDSKTQKEFYLFETHMPLADNA-----------RKHACQMLVDAVSDKAKDNTPAFC 218 Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 GDFN + + + + K ID+ + Sbjct: 219 TGDFNATPDAPEIATTICQ---SGILKDAYREAAVQHGALFTFPSKKTRIDFIFV----- 270 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCP--ISIDY 302 + + + LSDH P I ++ Sbjct: 271 -----KHATVLSTRTIVSS-----LSDHYPMVIVVEI 297 >gi|254504971|ref|ZP_05117122.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii DFL-11] gi|222441042|gb|EEE47721.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii DFL-11] Length = 361 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 40/294 (13%), Positives = 86/294 (29%), Gaps = 48/294 (16%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + ++ +++++VS N+ L + V L Y K D DI+ QE Sbjct: 103 LLTSSGDTREIKIVSINLEALFLGDLV----------------LTGYLKEADPDIIVFQE 146 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + K + + I R P + Sbjct: 147 --TLWNLQKWRWHQRGLPIGGPNTSVYPEHLLVGDLGELVIFSRFPIEDTSSLVIPGVTP 204 Query: 134 KD-SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 S +R + + I G+ + ++ +H S +N + + + A+ L Sbjct: 205 PGASVHYNADREILSFSINIEGQTVDLVSVHSDSPRTARRWQNKRAYFDKMDAVIAERL- 263 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + P + GD+N F ++++ ND +P + R Sbjct: 264 ------ESDATPLIAIGDWNSAPWSAR----FQRSLEANDLATAYPDGIPQVTRYFFDYR 313 Query: 253 NKIPI----DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + D + ++ + SDH P+ + Sbjct: 314 LRWILGSPVDQVAVSKDIGIVDVSLGPHI--------------GSDHRPLLVTL 353 >gi|222152632|ref|YP_002561807.1| exodeoxyribonuclease [Streptococcus uberis 0140J] gi|222113443|emb|CAR41130.1| exodeoxyribonuclease [Streptococcus uberis 0140J] Length = 275 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 79/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + R + D DI+ +QE Sbjct: 1 MKLISWNIDSLNAALTGESPRALLSR------AVLDTLVTEDPDILAIQETKLSATGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + S + + +N ++P +GA D G Sbjct: 55 KHMEILLSYFPNHLHVWRSSVEPARKGYAGTLFLYRNTLNPVVTFPEIGAPDPMDAEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V ++ + ++ L + Sbjct: 114 -----IITLEFDDFYVTQVYTPNAGDQLRRLPERQEWDIKYAEYLASL--------DRNK 160 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N + + + F N Sbjct: 161 PVLATGDYNVAHHEIDLANPASNRRSAGFTDEERAGFTALLAKGFTDTFRYLHGDIPNVY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ +I+ + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVIKSEMIHSGERQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 LLEID 274 >gi|152992239|ref|YP_001357960.1| exodeoxyribonuclease III [Sulfurovum sp. NBC37-1] gi|151424100|dbj|BAF71603.1| exodeoxyribonuclease III [Sulfurovum sp. NBC37-1] Length = 256 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 32/303 (10%), Positives = 72/303 (23%), Gaps = 76/303 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +SWN+N + E + ++ D D + LQE+ K Sbjct: 5 TFISWNVNGIRAVEKKNA---------------LKWIDESDIDFLGLQEI-------KAE 42 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + S + +A+ + + Sbjct: 43 ADQIPDSIFEKHYKFQSINSSSRKGQ-SGVALFTNIKGTASGGDHIDILNEGRIN----- 96 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 E + + +++ + + + +I + + Sbjct: 97 ------EYHFGSYVLFNVYFPNG-------QRSEERLAYKLAFYERFLAYINEVRTEGKS 143 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 +I GD N L + + N + F + Sbjct: 144 IIICGDVNTAHKEIDLARPKSNENTSGFLPVERAWMDKLLDNGYIDTFRYIHGDEPDRYS 203 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF + + + ++ + + SDHCP+ + Sbjct: 204 WWSYRTKARERNVGWRIDYFFVSDDLKEKIVDADILDHI-----------MGSDHCPVKL 252 Query: 301 DYD 303 D Sbjct: 253 VLD 255 >gi|297677283|ref|XP_002816533.1| PREDICTED: 5'-tyrosyl-DNA phosphodiesterase-like [Pongo abelii] Length = 392 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 84/287 (29%), Gaps = 48/287 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 L++WNI+ L + + Y D++FLQE+ Sbjct: 144 FSLITWNIDGLDLNN-----------LSERARGVCSYLALYSPDVIFLQEV--------- 183 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + TAI ++K V++ Q + R Sbjct: 184 --IPPYYSYLKKSSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPST-----KMMR 236 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V ++G ++ ++ HL+S + Q + + + + Sbjct: 237 NLLCVHVSVSGNELCLMTSHLEST----------RGHAAERMNQLKMVLKKMQE-APESA 285 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKIPI 257 + AGD N + + I + + + N K+ Sbjct: 286 TVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRF 345 Query: 258 DYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D A + ++ +S + + G+ SDH + + D Sbjct: 346 DRIFFRAAAEEGHIVPQSLDLLGL---EKLDCGRFPSDHWGLLCNLD 389 >gi|84516871|ref|ZP_01004229.1| hypothetical protein SKA53_06827 [Loktanella vestfoldensis SKA53] gi|84509339|gb|EAQ05798.1| hypothetical protein SKA53_06827 [Loktanella vestfoldensis SKA53] Length = 257 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 44/298 (14%), Positives = 82/298 (27%), Gaps = 63/298 (21%) Query: 3 RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 R Y++ ++ ++ +RL S+NI K D + Sbjct: 13 RAYIMGML-----PVTHKSRPLRLASYNIR-----------KAKGVDGRYDPGRIVDILA 56 Query: 63 NLDADIVFLQEMG-SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 LDAD++ LQE + + + + ++ DS A+ VR+ ++ Sbjct: 57 GLDADVIALQEADFRWRGRPGALSPDMIRQHTDYDLVPVTTQGDSLGWHGNAVLVRRGSL 116 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + L G R A+ + ++ G V+ HL Sbjct: 117 VTDVKRLILPGL-------EPRGALRIDMDAGG-PFSVIATHLGL--------------- 153 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + + L P + GDFN +R Sbjct: 154 -TRFHRQRQLAAISAAVAPDGRPTAVLGDFNEWSA------------TRGLDPLRADFTV 200 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + +D + + L + + R SDH PI Sbjct: 201 HAPGKSFHAAMPMAALDRIALGRGLT--LTDGGVVQT--------RQSLRASDHLPIW 248 >gi|229015755|ref|ZP_04172735.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273] gi|229021962|ref|ZP_04178522.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272] gi|228739337|gb|EEL89773.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272] gi|228745543|gb|EEL95565.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273] Length = 263 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 73/269 (27%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS--------- 102 L + + D D++ LQE+ V F + Sbjct: 18 EKIKYLAKVIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELRALNVKAYNII 77 Query: 103 ---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ V + ++ + KD+ R+ V + N K I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNIVKEDTFFISENKDTTYWK-TRKIVSATIAYNDKNITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKDQVDRLMERVN----SNELSFLMGDFNNNARLEG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +Q S Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQ---------S 233 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +SDH + + D Sbjct: 234 KTVHSSKVIFNGTNRNVISDHFGVEMQLD 262 >gi|332285653|ref|YP_004417564.1| catabolite repression control protein [Pusillimonas sp. T7-7] gi|330429606|gb|AEC20940.1| catabolite repression control protein [Pusillimonas sp. T7-7] Length = 260 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 81/309 (26%), Gaps = 80/309 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 +R++S N+N + + + +AD + +QE+ + N A Sbjct: 2 LRVISANLNGIRS---------------AVRKGFLDWVPQQNADFICMQELKAQADNMTA 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + ++ +S + P + A+ + Sbjct: 47 DMLNPEGYYGYFHYAEKKGYSGVGLYARQQ-------PLQVIQGLGVPEIDAEGRY---- 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E+ K+ V+ ++L S D + + L Sbjct: 96 --------LELVYDKLSVISVYLPSGSSGDHRQAAKFVFMEHFFKHLSELAQ-------C 140 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 V+ GD+N + D + + Sbjct: 141 GRQVVLCGDWNIAHQEIDLKNWKGNLKNSGFLPEERAWLTRVFDEIGWVDVYRSLYPDAT 200 Query: 246 N-ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 A N+ IDY + S + +R SDH Sbjct: 201 GEAYTWWSNRGQAWAKNVGWRIDYQIASPEIAATAKTASI-----------YKDERFSDH 249 Query: 296 CPISIDYDF 304 P++IDYD+ Sbjct: 250 APLTIDYDW 258 >gi|319952714|ref|YP_004163981.1| exodeoxyribonuclease iii xth [Cellulophaga algicola DSM 14237] gi|319421374|gb|ADV48483.1| exodeoxyribonuclease III Xth [Cellulophaga algicola DSM 14237] Length = 253 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 88/303 (29%), Gaps = 73/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+N+N + + K ++ D+V LQE+ K Sbjct: 1 MKIVSYNVNGIRAAINKGF---------------IDWLKIVNPDVVCLQEI-------KA 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + ++ +A+ K ++ G + R Sbjct: 39 MEEQLDLSLFEEAGYSYNYWYSAQKKGYSGVAILSKTKP----NHVEFGTGIDYMDFEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + V+ ++L S +D L ++++T K Sbjct: 95 N-----IRADYDGVSVMSMYLPSGTNIDRLSFKLK--------YMAEFQEYVTDLKVEHP 141 Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249 +I GD+N + ++ W ++ I + + + Sbjct: 142 NLIILGDYNICHKAIDIHNPVGLKNTSGFLPVEREWIGAFMDNGFIDSFRYFNEEPDKYT 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +DY ++ L + + SDHCPI + Sbjct: 202 WWSYRANARNNNKGWRLDYALVSTPLKDRLKRAVIL-----------AEAKHSDHCPILV 250 Query: 301 DYD 303 + Sbjct: 251 ELS 253 >gi|170088468|ref|XP_001875457.1| predicted protein [Laccaria bicolor S238N-H82] gi|164650657|gb|EDR14898.1| predicted protein [Laccaria bicolor S238N-H82] Length = 343 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 46/342 (13%), Positives = 90/342 (26%), Gaps = 106/342 (30%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + VRL +WNI L+ + Y + D DI+ L E Sbjct: 53 ITFPPREPGTVRLATWNICGLAASQKKGFKY---------------YVEAEDPDILVLTE 97 Query: 74 -----MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + + A+ K FP W I S+ ++ A+ K+ + Sbjct: 98 TKVNDVPNDPALTKRFPYAYWSI--------------SSKKSYSGTAILSKHEPLSVTRV 143 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 L G D G ++ + + +V+ ++ + + Sbjct: 144 -LPGHPDPSHVKGR------IITLEFENFYVVGTYVVNAGTDLKTLDEKKEWNVHFDAYI 196 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--------------------------- 221 + L +S P + GD N +G Sbjct: 197 RDL--------DSKKPVIWTGDLNVAPTEMGMYCNHPFGPRLITAADLANPKKKWNKTAG 248 Query: 222 ------DDFWKTIDPNDS-----LIRFPKEKDSRCNANKNLRNK---------IPIDYFV 261 F K + D + ++ + +D FV Sbjct: 249 YTEAETTAFRKILASPDDISANKFVDVWRQLHPEDRHYTYFSYRFNCRTKGLGWRLDMFV 308 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + + +Y SDHCP+ ++ + Sbjct: 309 LSERMMERVKMCEIRSEIY----------GASDHCPLVMEIE 340 >gi|163734305|ref|ZP_02141745.1| exodeoxyribonuclease III, putative [Roseobacter litoralis Och 149] gi|161392313|gb|EDQ16642.1| exodeoxyribonuclease III, putative [Roseobacter litoralis Och 149] Length = 262 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 31/305 (10%), Positives = 72/305 (23%), Gaps = 71/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 L +WNIN++ +EG+ + + D++ LQE S Sbjct: 3 FSLATWNINSVRLREGL----------------VLKLMTEEAPDVLCLQECKSPV---DK 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P + + + +A+ K + + Sbjct: 44 MPLDAFAAAGYAH------VVARGQKGYNGVAILSKIPMEEAAAEDFAALGHARH----- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E + V + ++ + D + + ++DW +K Sbjct: 93 --IAGRLENG---VTVHNFYVPAG--GDVADREVNEKFGQKLDYLTEMRDWFHTQKPEKS 145 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N D + ++ Sbjct: 146 --ILVGDLNIAPREDDVWDHKKLLKVVSHTPIEVEHLAQTQDAGGWVDITRQDIPEGKLF 203 Query: 249 KNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +D+ + ++ SDH P+ Sbjct: 204 SWWSYRAADWDAADKGRRLDHVWATSDIAAAGHDSRIV-------RGARGWEKPSDHAPV 256 Query: 299 SIDYD 303 +D Sbjct: 257 FAQFD 261 >gi|156309375|ref|XP_001617698.1| hypothetical protein NEMVEDRAFT_v1g225871 [Nematostella vectensis] gi|156195333|gb|EDO25598.1| predicted protein [Nematostella vectensis] Length = 232 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 34/242 (14%), Positives = 76/242 (31%), Gaps = 26/242 (10%) Query: 1 MIRKYVLALVFFLVPCTASV------AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54 M R + L F + +A + ++ +L++ N+ L + ++ + Sbjct: 1 MHRCLLSLLCFSTLALSAPIFAQANPDEQFKLLTHNVFLLPST----IKPGWGQQQRAAL 56 Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-- 112 Y + DA V L E+ A + + T L Sbjct: 57 IAEAAYIQGQDA--VILNELFDNPASNILLNGLQSQYPFQTPVLGRSRTGWDATLGAYSD 114 Query: 113 ------AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 +A+ + Q+ + N+ V + + NG+ + ++ H ++ Sbjct: 115 TTPEDGGVAIVSRWPI-EQRVQYVYSQGCGADYLSNKGFVYVKLNRNGQAVHIIGTHAQA 173 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFW 225 S ++ + Q L+++I+ + I GDFN +D Sbjct: 174 ADTGCS----DGKGTAVRASQFDELQNFISARGIALDQLVFIGGDFNVIKGSSEYHDMLV 229 Query: 226 KT 227 + Sbjct: 230 RL 231 >gi|123473915|ref|XP_001320143.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas vaginalis G3] gi|121902942|gb|EAY07920.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas vaginalis G3] Length = 407 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 98/298 (32%), Gaps = 25/298 (8%) Query: 19 SVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + ++SWNI ++ ++ L T TL Q + DI+ LQE + Sbjct: 121 PQERVFSILSWNILASKVARRDFYPLSTEKCMATYYRDTLTAQIVDEIHPDIIALQEFEA 180 Query: 77 YNA--VAKVFPKNTWCIFYST---ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP-- 129 A +K F +N + + + + + + T + + + +V + Q YP Sbjct: 181 RQASDWSKPFIENGYWVTVAPKGRYYTKKPADQLFVHGQATFVNLHRFDVLISQLFYPRD 240 Query: 130 --LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 L+ A D+ + + + V + K I F D+ + Sbjct: 241 SKLVSADDTDIKGCDDVVLITAVRTHSKPSKNYIILNVHMKFNDAEVRKRLAEIIMKETL 300 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + + + ++ GDFN K N + + Sbjct: 301 NFAHQQF------KVFGIIVVGDFNDKTNSPTLQRFYDFKLSNIYDAFHSTVNTAIFQK- 353 Query: 248 NKNLRNKIPIDYFVMDQNAYKF--LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ID+ ++ +N L Q+++ ++ I G SDH PI + Sbjct: 354 ----DDAARIDHILISKNIKVKSILSQDTYGQLAEAHPFIPCYGF-PSDHLPIGAVIE 406 >gi|260170324|ref|ZP_05756736.1| Endonuclease/exonuclease/phosphatase [Bacteroides sp. D2] Length = 297 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 40/337 (11%), Positives = 79/337 (23%), Gaps = 75/337 (22%) Query: 1 MIRKYVLALVFFLVPCTASVAQ-----------------------------KVRLVSWNI 31 M + + L+ F+ AS + +R+ ++N+ Sbjct: 1 MKKIVIYTLISFIFSVFASSCEDNKDNSLYYPDFTWDTGDGEEDEDPVTETSMRVATYNL 60 Query: 32 NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----SYNAVAKVFPKN 87 + T+ + Q K+ D +I +E SY Sbjct: 61 Q-----------VETGTGWTNRRERVAQLIKDYDFEICGFEEASWEQRSYLGTQLASDYQ 109 Query: 88 TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE 147 T N + S + R P + + R V Sbjct: 110 ILAYGRDTGNDDNKAGEMSGILYKKSRYTLLDAGRFWFSETPDIPSNGWDETNFKRFCVW 169 Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207 + + + ++ Q L D ++ K + P Sbjct: 170 GKFKDSKTQKEFYLFETHMPLADNA-----------RKHACQMLVDAVSDKAKDNTPAFC 218 Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 GDFN + + + + K ID+ + Sbjct: 219 TGDFNATPDAPEIATTICQ---SGILKDAYREAAVQHGALFTFPSKKTRIDFIFV----- 270 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCP--ISIDY 302 + + + LSDH P I ++ Sbjct: 271 -----KHATVLSTRTIVSS-----LSDHYPMVIVVEI 297 >gi|150402181|ref|YP_001329475.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C7] gi|150033211|gb|ABR65324.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C7] Length = 249 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 79/304 (25%), Gaps = 79/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++SWN+N + + + DI+ +QE + Sbjct: 1 MKMISWNVNGIRACLKNGFM---------------DFLERESPDIMCIQETKVQSG-QVQ 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ +S I + G K++ R Sbjct: 45 LGLDGYFQYWNYAEKKGYSGTAIFTKIKPNNVIL--------------GIKNTEHDGEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + K ++++++ + + + L+ + Sbjct: 91 -----VLTLEFDKYYLINVYTPNSQRGLTRLEYRQKWDQDFLNYIKTLE--------NEK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + I + + F + + Sbjct: 138 PVIFCGDLNVAHKEIDLKNPKNNVKNAGFTPEERIGFDNIVDSGFIDTFREFNKEP-DNY 196 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + + L + SDHCP+ Sbjct: 197 SWWSYRFNARSKNIGWRIDYFCISKILRDNLKDAFIMSEV-----------MGSDHCPVG 245 Query: 300 IDYD 303 I ++ Sbjct: 246 IIFE 249 >gi|15901674|ref|NP_346278.1| exodeoxyribonuclease [Streptococcus pneumoniae TIGR4] gi|15903702|ref|NP_359252.1| exodeoxyribonuclease [Streptococcus pneumoniae R6] gi|111658189|ref|ZP_01408884.1| hypothetical protein SpneT_02000620 [Streptococcus pneumoniae TIGR4] gi|116516049|ref|YP_817078.1| exodeoxyribonuclease III [Streptococcus pneumoniae D39] gi|149004304|ref|ZP_01829075.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS69] gi|168483377|ref|ZP_02708329.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC1873-00] gi|194397999|ref|YP_002038432.1| exodeoxyribonuclease III [Streptococcus pneumoniae G54] gi|237649626|ref|ZP_04523878.1| exodeoxyribonuclease III [Streptococcus pneumoniae CCRI 1974] gi|237822093|ref|ZP_04597938.1| exodeoxyribonuclease III [Streptococcus pneumoniae CCRI 1974M2] gi|303258792|ref|ZP_07344772.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP-BS293] gi|303261955|ref|ZP_07347901.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS292] gi|303263817|ref|ZP_07349739.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS397] gi|303265648|ref|ZP_07351547.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS457] gi|303268757|ref|ZP_07354546.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS458] gi|61223736|sp|P0A2X3|EXOA_STRPN RecName: Full=Exodeoxyribonuclease gi|61223737|sp|P0A2X4|EXOA_STRR6 RecName: Full=Exodeoxyribonuclease gi|153627|gb|AAA26879.1| exodeoxyribonuclease [Streptococcus pneumoniae] gi|14973347|gb|AAK75918.1| exodeoxyribonuclease [Streptococcus pneumoniae TIGR4] gi|15459332|gb|AAL00463.1| Exodeoxyribonuclease [Streptococcus pneumoniae R6] gi|116076625|gb|ABJ54345.1| exodeoxyribonuclease III [Streptococcus pneumoniae D39] gi|147757737|gb|EDK64752.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS69] gi|172043234|gb|EDT51280.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC1873-00] gi|194357666|gb|ACF56114.1| exodeoxyribonuclease III [Streptococcus pneumoniae G54] gi|302637038|gb|EFL67527.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS292] gi|302640293|gb|EFL70748.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP-BS293] gi|302641713|gb|EFL72071.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS458] gi|302644775|gb|EFL75023.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS457] gi|302646855|gb|EFL77080.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS397] gi|332200400|gb|EGJ14473.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47368] Length = 275 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K S+P +GA S R Sbjct: 55 KHVEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDLEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +V ++ + + ++ L + Sbjct: 114 I-----ITLEFDAFFVTQVYTPNAGDGLKRLEERQVWDAKYAEYLAEL--------DKEK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 VLEID 274 >gi|315613690|ref|ZP_07888597.1| exodeoxyribonuclease III [Streptococcus sanguinis ATCC 49296] gi|315314381|gb|EFU62426.1| exodeoxyribonuclease III [Streptococcus sanguinis ATCC 49296] Length = 296 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 38/322 (11%), Positives = 84/322 (26%), Gaps = 57/322 (17%) Query: 8 ALVFFLVPCTASVAQKV-RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 A ++ + C + K +L+SWNI++L+ + + + Q +A Sbjct: 5 AFFWYNIVCNLNEKGKFMKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENA 58 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 DI+ +QE + S ++ + K Sbjct: 59 DIIAIQETKLSAKGPTKKHLEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTI 118 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 S+P +GA S R + + +V ++ + ++ Sbjct: 119 SFPEIGAP-STMDLEGRI-----ITLEFDTFFVTQVYTPNAGDGLKRLEERQVWDVKYAE 172 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPN 231 L + P + GD+N R + + + Sbjct: 173 YLAQL--------DKEKPVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAT 224 Query: 232 DSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYN 281 F + IDY++ + + + + Sbjct: 225 GFTDTFRHIHGDVPERYTWWAQRSKTSKINNTGWRIDYWLTSNRVAEKVTKSDMIDSGAR 284 Query: 282 EDDIKSRGKRLSDHCPISIDYD 303 + DH PI ++ + Sbjct: 285 Q-----------DHTPIVLEIE 295 >gi|238028924|ref|YP_002913155.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia glumae BGR1] gi|237878118|gb|ACR30451.1| Endonuclease/exonuclease/phosphatase family protein [Burkholderia glumae BGR1] Length = 256 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 85/305 (27%), Gaps = 75/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++ N+N + + + + AD V +QE+ KV Sbjct: 2 LRVITANLNGIRSAAKKGFF---------------DWLGDQQADCVCVQEI-------KV 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + F + + A ++ ++G S A R Sbjct: 40 SADDLPAEFAAPHGFTGYFHHAQKKGYSGAGLYTRREP-----DDVIIGYGSSEFDAEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 VE K+ V+ +++ S D + + L ++ Sbjct: 95 Y-----VEARFGKLSVVSVYVPSGSSGDERQQAKYRFMNEFMPHLAEL--------KATR 141 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N + + + + + + D R + Sbjct: 142 EVIVCGDVNIVHKEIDIRNWKSNQKNSGCLPEERAWLTKLFDEVGYVDVFRTLDPRPDQY 201 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY + Q S R + SDH P++ Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKQTSI-----------FRDIKFSDHAPLT 250 Query: 300 IDYDF 304 +DYD+ Sbjct: 251 VDYDY 255 >gi|309806468|ref|ZP_07700473.1| exodeoxyribonuclease III [Lactobacillus iners LactinV 03V1-b] gi|308167141|gb|EFO69315.1| exodeoxyribonuclease III [Lactobacillus iners LactinV 03V1-b] Length = 275 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 84/303 (27%), Gaps = 56/303 (18%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 +SWNI++L+ + R+ + K + D+V +QE Sbjct: 3 FISWNIDSLNAALTGDSDRAHETRS------VLNKIKEANPDVVAIQETKLRANGPTKKH 56 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + + + S ++ + K Q SYPL+GA D+ + G Sbjct: 57 CDILADIFEDYQYVWRSSQEPARKSYAGTMFLYKKNYHPQVSYPLIGAPDTMDQEGR--- 113 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++ + ++ ++ + + + L P Sbjct: 114 ---IITLEFDTFYLTQVYTPNSGNELKRLADREIWDTKYQEYLAKLDQ--------NKPV 162 Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + +GD+N + + + F + Sbjct: 163 IASGDYNVAHQEIDLKHPETNHHNAGFTDEERKGFSKLLSLGFIDTFRYINGDITDVYSW 222 Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY+++ Q + Q + + DHCPI + Sbjct: 223 WSQRIRTSKTNNAGWRIDYYLVSQRLADKIEQSKMIDTGDRK-----------DHCPILL 271 Query: 301 DYD 303 D Sbjct: 272 KID 274 >gi|254472466|ref|ZP_05085866.1| exodeoxyribonuclease III protein [Pseudovibrio sp. JE062] gi|211958749|gb|EEA93949.1| exodeoxyribonuclease III protein [Pseudovibrio sp. JE062] Length = 243 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 25/272 (9%), Positives = 66/272 (24%), Gaps = 58/272 (21%) Query: 60 YAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + D++ LQE + + K + + +A+ Sbjct: 1 MLLDHAPDVLCLQETKCPDGSFPSAAINKLGYRYV-----------EVHGQKGYHGVALL 49 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + + D+ + V NG K+ + + ++ + + E Sbjct: 50 SRVPLENVERKEFCEMGDTRH-------IAADVAFNGGKVRIHNFYVPAGGDVPDPEVND 102 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG--NNDDFWKTI------- 228 + ++L + + K ++ GD N ++ K + Sbjct: 103 KFAHK-----LKFLDEMESWFKGFDGQSIVVGDLNIAPYENDVWSHKQLIKVVSHTPLEC 157 Query: 229 -------DPNDSLIRFPKEKDSRCNANKNLRNKI----------PIDYFVMDQNAYKFLI 271 + + + K + +D+ M + Sbjct: 158 QRLEDVREAGNYVDTMRKHMPMDQKIYTWWSYRAKDWSASDKGRRLDHVWMTPETAQHTK 217 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ SDH P+ + Sbjct: 218 DVQIM-------RDARGWEKPSDHAPVMAVLE 242 >gi|145534702|ref|XP_001453095.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124420795|emb|CAK85698.1| unnamed protein product [Paramecium tetraurelia] Length = 348 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 38/312 (12%), Positives = 86/312 (27%), Gaps = 76/312 (24%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 V++ SWN+N R + +Y ++ D++ L E+ + Sbjct: 82 FSTPTVKIASWNVNG--------------IRAATKREQAVKYLQDTKFDVICLNELKADQ 127 Query: 79 AV---AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 AV + + F N ++ +A+ K + + + D Sbjct: 128 AVFDKENLGAQFGKHYFLYLNFCKNKGG-------YSGVAIASKVKPISVKCDIGISKHD 180 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R + ++ +++ ++ + L+ L+ + L+ Sbjct: 181 QEGR---------TLTAEYERFYLVACYVPNAGQKLERLDYRTKEWDVDFQNYLEDLRK- 230 Query: 195 ITQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFP 238 P ++ GD N + D F + Sbjct: 231 -------KKPTILCGDLNVSHHEIDLANPAGNKKTAGFTQEERDQFTNYLQKGWVDSFRH 283 Query: 239 KEKDSRCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + R +DYF++++ + +I + Sbjct: 284 LHPKEVKYSYFSARFNSKQSNKGWRLDYFIINKESTDAIIMSDINT-----------AVE 332 Query: 292 LSDHCPISIDYD 303 SDH PI + D Sbjct: 333 GSDHVPIECEVD 344 >gi|325972140|ref|YP_004248331.1| endonuclease/exonuclease/phosphatase [Spirochaeta sp. Buddy] gi|324027378|gb|ADY14137.1| Endonuclease/exonuclease/phosphatase [Spirochaeta sp. Buddy] Length = 331 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 41/354 (11%), Positives = 94/354 (26%), Gaps = 79/354 (22%) Query: 2 IRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSE--------QEGVSLWKNSVKRT 50 + +L + C+ + R++S+N+ L + E + + Sbjct: 1 MVIVLLVFLILFSGCSCDIQDDPKHFRVLSYNVQNLFDAQLDGGEYPEYQDAKNWTDRSY 60 Query: 51 TSDYTLLRQYAKNLD---ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107 T L + D + L+E+ + V + + Y + S + Sbjct: 61 RMRLTTLSTMLLSDRIGFPDAIILEEVEGLSVVQDLLSLHLGRKGYRWYAVAKGSDAAIS 120 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 +A+ ++ + G R ++ + I + +H KS Sbjct: 121 ------VAIISRHPITSSLVH---------GSDGIRPVLQATIATQAGDICLFALHAKSQ 165 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW-- 225 S L A+ + + S ++ GDFN + + + Sbjct: 166 IGDGS---------ELRLALAKAVGSAAQKHASS--AVLLCGDFNEDPTSIWSTESGQPA 214 Query: 226 ------------------------KTIDPNDSLIRFPKEKDSRCNANK--NLRNKIPIDY 259 + + P + + + + D Sbjct: 215 LVDMSHPDAGVYQNAGSLGLVGSSQQLSPALYYCPYLDQAWTSSVSGSCNWDGQWHRYDQ 274 Query: 260 FVMDQNAYKFLIQE--SFSEILYNE---DDIKSRGKRL------SDHCPISIDY 302 + + + + E SF+ D + L SDH P+ + Sbjct: 275 ILCNNKLFDGMGWEYESFTIQNLPSLCSSDGRPYAWNLNTLQGVSDHFPVLMTL 328 >gi|317496367|ref|ZP_07954721.1| endonuclease/Exonuclease/phosphatase [Gemella moribillum M424] gi|316913503|gb|EFV34995.1| endonuclease/Exonuclease/phosphatase [Gemella moribillum M424] Length = 354 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 98/313 (31%), Gaps = 61/313 (19%) Query: 29 WNINTLSEQEGVSLWKN--------SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--- 77 WN+ + V + + ++ T + + K AD+ FLQE+ Sbjct: 61 WNVGYFGMDKDVDFFMDGGKMVHPIDKAHVENNLTNITRIIKEEAADVTFLQEVDVDSKR 120 Query: 78 -------NAVAKVFPKNT---WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 + + K ++ + + N+ I+T+ +N Q Sbjct: 121 TYNINQVDYLDKALDNSSIFAYNFRVAYIPYPLPPLGKVNSGIYTSTKFNIENAERYQMP 180 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 P + + +E + KK+ +++ HL ++ + + Q Sbjct: 181 IPFTFPTRLANLKRGFSVIYSNIENSDKKLVLINAHLDAYDKDNKGKIA----------Q 230 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNR------------KINYLGNNDDFWKTIDPNDSLI 235 + L +++ ++ ++ DFN+ L + F KT+ + + Sbjct: 231 TKQLIEFMEKEYAKGNYVLVGADFNQELRDLTKEEIEKTPAELWRAELFDKTLLKDKFKL 290 Query: 236 RFPKEKDS------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + S N + ID F+ N ++ + Sbjct: 291 YYDNSRPSARLNNKPYEKGSNGTYEFIIDGFIASDNIEVSQVK------------TLDQD 338 Query: 290 KRLSDHCPISIDY 302 R SDH P+ + + Sbjct: 339 YRYSDHNPVKLRF 351 >gi|297204418|ref|ZP_06921815.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC 29083] gi|197716686|gb|EDY60720.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC 29083] Length = 439 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 37/297 (12%), Positives = 83/297 (27%), Gaps = 39/297 (13%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + ++S+N+ L + TT+ + Y DIV ++E +Y+A Sbjct: 23 SGTFSVLSYNVAGLPSAISSASTP-RESSTTAIGQRIAPY------DIVHVEEDFNYHAY 75 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 N + S + + + + ++ + + + D + Sbjct: 76 LYAADTNH----AYRTPTSGGAGIGSGLNTLSKLPYDADDFERVRWNSCQVDSGDCLTPK 131 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 G G + ++H + + + L +I Sbjct: 132 G--FTFIRERLAEGVYVDFYNLHTNAGTNDGD--------LASRADNLNQLSAFIKTH-S 180 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA------------- 247 + V+ GD N + G D + N + + Sbjct: 181 AGNAVVVMGDTNTRYTRSG--DTIAEFAAANGLTDPWVQLIRGGTPPAKGSDALVCDQTG 238 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +D + + L S++ + S LSDH PI++ + + Sbjct: 239 TTVPNTCEVVDKVLYRSSKLVSLNATSYNNEHAK--FLTSDNLMLSDHDPITVGFTW 293 >gi|156543084|ref|XP_001605156.1| PREDICTED: similar to ENSANGP00000020924 [Nasonia vitripennis] Length = 391 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 32/301 (10%), Positives = 75/301 (24%), Gaps = 79/301 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAVAK 82 +++ +WN++ + + Y + DADI+ LQE + Sbjct: 140 IKICTWNVSGIRAVLKKNGMT---------------YLEREDADIIALQETKCETKKIPD 184 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + ++ + + +A+ K + D Sbjct: 185 EVKLKGYTRYFLDSKKAGY----------CGMALYSKKEPIDIS-----MGLDEEFDDEG 229 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + +++++++ + + Q L + Sbjct: 230 RL-----ITAEYEHFYLVNVYVPNAGNKLVTLPKRLKWNEAFKKHIQDL--------DKK 276 Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P +I GD N D + F + +A Sbjct: 277 KPVIICGDMNVAHQEIDLKNPKTNTKNAGFTKEERDGMTDFLQAGFVDTFRLLYPDKTDA 336 Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +DY+++ + + D + SDHCP+ Sbjct: 337 YTFWAYFNNARSKNIGWRLDYYIVSEKIKNKVC-----------DVVNRDQVFGSDHCPV 385 Query: 299 S 299 Sbjct: 386 V 386 >gi|145540457|ref|XP_001455918.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124423727|emb|CAK88521.1| unnamed protein product [Paramecium tetraurelia] Length = 243 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 36/287 (12%), Positives = 86/287 (29%), Gaps = 51/287 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++++ WN + + L + L+ Q+ K D+ +E+ Sbjct: 2 NTLKILQWNTLADTLSDAFPLINKQFLQWNHRSQLIAQFLKQHPCDVYCFEEVDHPEFFQ 61 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +V +F ++ N IA RK P L ++ Sbjct: 62 QVLVD---HLFIYQKKQHNSDGIL--------IAYRKDLKLQSVNIVPFLENNKVSNQFF 110 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 ++++ ++ HLK+ + Q + L + + K Sbjct: 111 --------IKVDFLDFILVVTHLKAKT----------DFEKIRRNQLEQLNKCVKEDK-- 150 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI---- 257 ++ GDFN + ++ + + K + +N+ + Sbjct: 151 ---VILCGDFNTQP-----------ELEAVSNFLEISGMKCTNTTVPTTSKNRGKLETNI 196 Query: 258 -DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 DY + + + Q +E + + SDH + +++ Sbjct: 197 KDYILY-KGVHLRQSQVGPTEGVQINESGLPSELFPSDHIFLIGEFE 242 >gi|332240176|ref|XP_003269266.1| PREDICTED: deoxyribonuclease-1-like [Nomascus leucogenys] Length = 281 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 34/285 (11%), Positives = 88/285 (30%), Gaps = 35/285 (12%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AV 80 +++ ++NI T E + + + Q DI +QE+ + AV Sbjct: 22 SLKIAAFNIQTFGET---------KMSNATLVSYIVQILSRY--DIALVQEVRDSHLTAV 70 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K+ + +++ ++ R V V+ Y G + + Sbjct: 71 GKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSVVDSYYYDDGCEPCGNDT 130 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD-WITQKK 199 +R + + + L + + + L D ++ ++ Sbjct: 131 FSREPAIVRFSQVTEVREFAIVPLHA-------------APEDAVAEIDALYDVYLDVQE 177 Query: 200 ESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + ++ GDFN +Y+ + + + + + + + D Sbjct: 178 KWGLEDIMLMGDFNAGCSYVRPSQWSSIRLRTSPTFQWLIPDTADTTATSTHCAY----D 233 Query: 259 YFVMDQNAYK-FLIQESFSEILYNEDDIKSR--GKRLSDHCPISI 300 V+ + ++ +S + S + +SDH P+ + Sbjct: 234 RIVVAGMLLQGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEV 278 >gi|256085040|ref|XP_002578732.1| neutral sphingomyelinase [Schistosoma mansoni] gi|238664115|emb|CAZ34970.1| putative neutral sphingomyelinase [Schistosoma mansoni] Length = 631 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 82/312 (26%), Gaps = 43/312 (13%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +K +++++N + +S R + D D++ LQE+ + Sbjct: 4 EKFKVLTFN-------CWAVFFPSSTVRKEDRVNAIASKLSVGDFDVILLQEIWLESDYR 56 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K+ YS N I + L+ D + G Sbjct: 57 KLRNILDEKYPYSNYFYCNLIGTGMCIFSKWTIECVFTHPFTANGYPHLIHQADYYCGKG 116 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + G +I HL + LD + + Y+ Q + +++ Sbjct: 117 --IGLARITSKEGFRINFYVTHLIARYELDRMLDRYNG---HRISQLVEVMEFVRMTSTG 171 Query: 202 LVPFVIAGDFNRKINYLGNN--------DDFW------------KTIDPNDSLIRFPKEK 241 +I GDFN + N D W ++ Sbjct: 172 SDAIIITGDFNLESNTSAIELFSTSLKLSDAWLNNTVALKNTNITDLESEGCTCDRADNP 231 Query: 242 DSRCNANKNLRNKIPIDYFVMDQN----------AYKFLIQESFSEILYNEDDIKSRGKR 291 N +DY +Y L+ S + G Sbjct: 232 YRNQLWTNTYGNGERLDYIFYRSGPSIIDSFYIPSYAKLVCNSCWLDMRKVP-GDPHGLH 290 Query: 292 LSDHCPISIDYD 303 SDH ++ + Sbjct: 291 YSDHEGVAASFT 302 >gi|330901156|gb|EGH32575.1| exonuclease III [Pseudomonas syringae pv. japonica str. M301072PT] Length = 219 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 26/256 (10%), Positives = 67/256 (26%), Gaps = 60/256 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDEQFPQ 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + H +A+ +N + G + + Sbjct: 45 AEVEALGYHVHFH------------GQKGHYGVALLSRNAPLALHK----GFEGDDEESQ 88 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + NG+ + +++ F + + + L+ + + + Sbjct: 89 KRFIWGTYADSNGQPVTIMN-----GYFPQGGSRDHPTKFPAKQRFYENLQTLLEGQFRN 143 Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240 P ++ GD N ++L ++ + + + F Sbjct: 144 DQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRHL 203 Query: 241 KDSRCNANKNLRNKIP 256 + + Sbjct: 204 HPEVVDRFSWFDYRSR 219 >gi|190344366|gb|EDK36033.2| hypothetical protein PGUG_00131 [Meyerozyma guilliermondii ATCC 6260] Length = 364 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 78/307 (25%), Gaps = 40/307 (13%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 VRL + NI + +R + + A +V LQE+ + + Sbjct: 65 VRLYTHNIR-FDNHNLDKHERYWSERKHLVTSSIDYNTDASFASVVCLQEVLHHQLQDIL 123 Query: 84 FPK------NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 F + W + + T+ N P + +K + Sbjct: 124 FNLNNKDTRDEWTYYGVGRSDGYTRGEYAPILYRTSDWDLVDNKTFWLSETPRIPSK-GW 182 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 A R + + + L+ F + AQ + + + Sbjct: 183 DAALERIVTMVTLRSKLNPLVTLNFFNTHF---------DHRGKAARRHSAQLIANKMEN 233 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL--IRFPKEKDSRCNANKNLRN-K 254 + P + GDFN + + + +L Sbjct: 234 Y--NNYPSFLCGDFNTQPTDEPYQILIKHGMKDSRALIDHLHHYGHTGTFTGFNKHNEAN 291 Query: 255 IPIDYFVM------DQNAYKFLIQESFSEILYNEDDIKS------------RGKRLSDHC 296 IDY + ES + ++ +SDH Sbjct: 292 SVIDYVWAPYFAENGNDQPSMETTESINYYNWDFHKTHKIALRSFAILHSYYDFYMSDHR 351 Query: 297 PISIDYD 303 P+S DYD Sbjct: 352 PVSADYD 358 >gi|121708426|ref|XP_001272127.1| transcription factor, putative [Aspergillus clavatus NRRL 1] gi|148886824|sp|A1CIJ6|CCR4_ASPCL RecName: Full=Glucose-repressible alcohol dehydrogenase transcriptional effector; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase gi|119400275|gb|EAW10701.1| transcription factor, putative [Aspergillus clavatus NRRL 1] Length = 667 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 39/360 (10%), Positives = 92/360 (25%), Gaps = 72/360 (20%) Query: 16 CTASVAQKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 ++ +K+ ++S+N S Q V L+ ++ +DIV LQE Sbjct: 290 TASASTEKITVLSYNTLCDSSATQSHYGYAPARVLSWEFRRELILSELRSHGSDIVCLQE 349 Query: 74 MG----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 + + ++ + +++ R + + D+ A + +L + Sbjct: 350 IDQGSYNEYFREQLAYNDYKGVYWPRGRAMGMQEEDAKGVDGCATFFKGSKFILLDKQLI 409 Query: 130 LLGAK-----------DSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSF------- 167 G D ++R + + ++V G + V++ HL Sbjct: 410 NFGQTAVRRPDAKGQDDIYNRLWQKDHIAVVVFLENRQTGSRFIVVNAHLYWDPAFKDVK 469 Query: 168 -----------------------CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 C + + + + +P Sbjct: 470 LIQTAILMEEITKLSETYAKWPACTDKAAFRFSKEEGQTEAPPPEEPAPSVQYSSGDQIP 529 Query: 205 FVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRC---- 245 ++ GD N N + + F + Sbjct: 530 LLMCGDLNSSPGSAAYNLIAHGRLDEEHPDLEKRLYGNLSKVGMTHPFKLKSAYGSIGEL 589 Query: 246 -NANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 N K +DY + + + + + SDH + ++ Sbjct: 590 PFTNYTPDFKDILDYIWYSSNSLHVSALLGEVDKDYLQKVPGFPNYHFPSDHIALFAEFT 649 >gi|291234355|ref|XP_002737116.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii] Length = 443 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 91/303 (30%), Gaps = 49/303 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NA 79 Q +R+ ++N+ S +L + DI+ +QE+ A Sbjct: 26 QPLRIAAFNVQVFGV---------SKMSKPMVPEILTKIILRY--DIILIQEVRDSTGQA 74 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-------------------TAIAVRKKN 120 + + + ++ + S ++I A RK Sbjct: 75 IQDLLYRVNTADALEKQQDASCDAEKSCDNIDGDFDMVISERLGRSSSKEQYAYIYRKSR 134 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 V V + G ++ + R + + I D++ Sbjct: 135 VSVTDSYHYDDGLEEDSTDHYEREPFIVRFHSPFTDVKDFAIGGIHTKPDDAVSEIDRL- 193 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 A D + + +IAGD+N +Y+ ++D + + + + Sbjct: 194 -------ADVYDDIVKRWSLED--VLIAGDYNAACSYVKSDDWKNIRLRSQERFLWLIAD 244 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLI-QESFSEILYNEDDIKSRGKR--LSDHCP 297 A D V+ + K + S E L++++ + + +SDH P Sbjct: 245 NVDTNVAGDICAY----DRLVVGGDLMKRAVWPGSAREFLFDKEYGLTDEQTSEVSDHYP 300 Query: 298 ISI 300 + + Sbjct: 301 VEM 303 >gi|94989847|ref|YP_597947.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS10270] gi|94543355|gb|ABF33403.1| Exodeoxyribonuclease III [Streptococcus pyogenes MGAS10270] Length = 303 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 38/327 (11%), Positives = 90/327 (27%), Gaps = 57/327 (17%) Query: 3 RKYVLALVFFLVPCTASVA-QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 + +++ + + +++L+SWNI++L+ + + R + Sbjct: 7 KSLIVSFFVTITTRLSVRKRNQMKLISWNIDSLNAALTGESPRALLSR------AVLDTL 60 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 DADI+ +QE T ++ + S + + KN Sbjct: 61 VAQDADIIAIQETKLSAKGPTKKHIETLLSYFPNYLHVWRSSVEPARKGYAGTMFLYKNT 120 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 ++P +GA + G ++ + + +V ++ + + Sbjct: 121 LNPVITFPEIGAPTTMDAEGR------IITLEFEDFFVTQVYTPNAGDGLRRLDDRQIWD 174 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWK 226 + L ++ P + GD+N R + + Sbjct: 175 HKYADYLTEL--------DAQKPVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERQGFT 226 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFS 276 + F + + IDY++ + + Sbjct: 227 NLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGWRIDYWLASNRLVDKVKRSEMI 286 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303 + DH PI +D D Sbjct: 287 SSGERQ-----------DHTPIFLDID 302 >gi|82913491|ref|XP_728665.1| exodeoxyribonuclease III [Plasmodium yoelii yoelii str. 17XNL] gi|23485131|gb|EAA20230.1| exodeoxyribonuclease III [Plasmodium yoelii yoelii] Length = 271 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 38/316 (12%), Positives = 89/316 (28%), Gaps = 80/316 (25%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + +R+++ N+N + + + +ADIV LQE+ Sbjct: 6 PSPSIPCLPMRIITLNVNGIRSAARKGFF---------------DWLPKQNADIVCLQEI 50 Query: 75 --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + ++F ++ +Y + + +A+ + Sbjct: 51 KAQTTQLNDELFWPESYACYYLEAEKKGY----------SGVALYARKEPDDVIQGLGWD 100 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 D+ +R +E ++ V+ +++ S + + ++ Sbjct: 101 DMDTEARY---------LEARFGELSVVSLYIPSGSSSEQRQ-------AVKFXFLDRFL 144 Query: 193 DWITQKKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIR 236 ++ S ++ GD+N + + + Sbjct: 145 PFLDDCARSGRQYIFCGDWNIAHKPIDLKNWRSNQKNSGFLPEERAWLDRVFEEAGWVDA 204 Query: 237 FPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 F N+ IDY V+ + + + Sbjct: 205 FRAVNPEPE-QYTWWSNRGQAWAKNVGWRIDYQVVSPGLRELIRSAAI-----------Y 252 Query: 288 RGKRLSDHCPISIDYD 303 + +R SDH P+ IDYD Sbjct: 253 KEERFSDHAPLIIDYD 268 >gi|239979144|ref|ZP_04701668.1| hypothetical protein SalbJ_06897 [Streptomyces albus J1074] gi|291451021|ref|ZP_06590411.1| conserved hypothetical protein [Streptomyces albus J1074] gi|291353970|gb|EFE80872.1| conserved hypothetical protein [Streptomyces albus J1074] Length = 341 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 86/320 (26%), Gaps = 85/320 (26%) Query: 1 MIRKYVLALVFFLVPCT-------------ASVAQKVRLVSWNINTLSEQEGVSLWKNSV 47 ++R+ AL+ L+P ++ + + + N+N + Sbjct: 90 LVRRSATALIALLLPAVVWLNLFGGLVTDKSATGGDLTVATHNVNADNP----------- 138 Query: 48 KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107 D + AD+V L+E+ + + + Sbjct: 139 -----DPAATARDLAASGADVVALEELSPEA-------------VPAFREALAATYPHHA 180 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS- 166 + + + L + A+ V+ + V HL S Sbjct: 181 VEGTVGLWSKYPLSATAPVDIKLGWTR----------ALRSTVDTPSGPLAVYVAHLPSV 230 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 +D+ S A+ L I E L V+ GD N +N + Sbjct: 231 RVKVDAGFTAGQRDSS-----AEALGLAIRG--EELDRVVLLGDLNGTMND--------R 275 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + P S +R + ID ++ + + S + Sbjct: 276 ALSPVTSQMRSTQGAAGNGFGFSWPASFPMARIDQIMV-----QGVEPVSSWTLP----- 325 Query: 285 IKSRGKRLSDHCPISIDYDF 304 + SDH PI+ F Sbjct: 326 -----RTASDHLPIAARISF 340 >gi|315445296|ref|YP_004078175.1| metal-dependent hydrolase [Mycobacterium sp. Spyr1] gi|315263599|gb|ADU00341.1| metal-dependent hydrolase [Mycobacterium sp. Spyr1] Length = 263 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 78/307 (25%), Gaps = 82/307 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LV++NI D LDADI+ LQE+ S A + + Sbjct: 1 MKLVTFNILHGRTPG-----------AEVDLDRFVDCVAGLDADILALQEVDSIQARSGL 49 Query: 84 FPKNTWCIFYSTER---------------LINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 R + + + +A+ + V Q Sbjct: 50 ADLTALAAEAMGARSHRFVAAIAGTPGATWMAATGEEQPGTAAYGVALLSRYPAVSWQVA 109 Query: 129 PLLGAKDSFS------------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 L F R AV + ++ V + HL + Sbjct: 110 RLPRIPFPFPLYLREPRKVVVVHEEPRAAVIGRFDTPLGELTVANTHLSFVPGWNRY--- 166 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 L + + P+++ GD N P R Sbjct: 167 -------------QLHHLMRDVRGLPSPWIVTGDLNMPAK-------------PARRWSR 200 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + R +D+ + D+ A + + +SDH Sbjct: 201 LHCLASAPTFPA--DRPTRQLDHVLTDEPA-------------FTIRSYDTPEMAISDHR 245 Query: 297 PISIDYD 303 P+ +D + Sbjct: 246 PLVVDLE 252 >gi|259500789|ref|ZP_05743691.1| exodeoxyribonuclease III [Lactobacillus iners DSM 13335] gi|302190760|ref|ZP_07267014.1| exonuclease III [Lactobacillus iners AB-1] gi|312871137|ref|ZP_07731235.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 3008A-a] gi|312872693|ref|ZP_07732758.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 2062A-h1] gi|312874955|ref|ZP_07734974.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 2053A-b] gi|329919752|ref|ZP_08276703.1| exodeoxyribonuclease III [Lactobacillus iners SPIN 1401G] gi|259167483|gb|EEW51978.1| exodeoxyribonuclease III [Lactobacillus iners DSM 13335] gi|311089700|gb|EFQ48125.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 2053A-b] gi|311091735|gb|EFQ50114.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 2062A-h1] gi|311093151|gb|EFQ51497.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 3008A-a] gi|328937099|gb|EGG33527.1| exodeoxyribonuclease III [Lactobacillus iners SPIN 1401G] Length = 275 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 84/303 (27%), Gaps = 56/303 (18%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 +SWNI++L+ + R+ + K + D+V +QE Sbjct: 3 FISWNIDSLNAALTGDSDRAHETRS------VLNKIKEANPDVVAIQETKLRANGPTKKH 56 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + + + S ++ + K Q +YPL+GA D+ + G Sbjct: 57 CDILADIFEDYQYVWRSSQEPARKSYAGTMFLYKKNYHPQVTYPLIGAPDTMDQEGR--- 113 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++ + ++ ++ + + + L P Sbjct: 114 ---IITLEFDTFYLTQVYTPNSGNELKRLADREIWDTKYQEYLAKLDQ--------NKPV 162 Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + +GD+N + + + F + Sbjct: 163 IASGDYNVAHQEIDLKHPETNHHNAGFTDEERKGFSKLLSLGFIDTFRYINGDITDVYSW 222 Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY+++ Q + Q + + DHCPI + Sbjct: 223 WSQRIRTSKTNNAGWRIDYYLVSQRLADKIEQSKMIDTGDRK-----------DHCPILL 271 Query: 301 DYD 303 D Sbjct: 272 KID 274 >gi|255536608|ref|YP_003096979.1| AP endonuclease domain protein [Flavobacteriaceae bacterium 3519-10] gi|255342804|gb|ACU08917.1| AP endonuclease domain protein [Flavobacteriaceae bacterium 3519-10] Length = 325 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 91/328 (27%), Gaps = 91/328 (27%) Query: 1 MIRK---YVLALVFFLVPCT---------ASVAQKVRLVSWNINTLSEQEGVSLWKNSVK 48 M +K + LA+ L+ T ++ +++V+ NI Sbjct: 60 MWKKRALFFLAVSLLLINPTRRWLNFTGESNEKANLKIVTMNIKGGGYG----------- 108 Query: 49 RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108 + +Y AD+V QE ++ Sbjct: 109 -----REAIYEYLNTSGADVVLAQE---------------------HMGELSVPGYSHRT 142 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 D + A+ K + Q+ + A + INGK I ++I+L F Sbjct: 143 DTYELTALNSKTEILHQEKIKTSENGE---------AFFADIRINGKTIRFVNIYLNPFS 193 Query: 169 FLDS---LENTYSPSCSLLSQQAQWLKDWITQKKES-----------LVPFVIAGDFNRK 214 F S Y + L L ++ P ++AGDFN Sbjct: 194 FDKSKVKPSEDYDKNKRKLRYILSTLIPTFKAHQDEVSVIKKTIAESPYPVIVAGDFNAV 253 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 N + F + + + + + I IDY + Sbjct: 254 PNSYEYYQL------SENLKDVFVETGNGNSTSFHDYKIPIRIDYVFCSEEITP------ 301 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302 R ++SDH PI ++ Sbjct: 302 -------VRYTVDRRAKMSDHYPIIAEF 322 >gi|152985117|ref|YP_001351598.1| hypothetical protein PSPA7_6287 [Pseudomonas aeruginosa PA7] gi|150960275|gb|ABR82300.1| hypothetical protein PSPA7_6287 [Pseudomonas aeruginosa PA7] Length = 274 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 35/294 (11%), Positives = 79/294 (26%), Gaps = 62/294 (21%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 ++RL+S+NI E + + ++ + + D D+V L Sbjct: 12 PGDGRLRLLSFNIQVGISTERYRHYLTRGWQHLLPHAGRATNLKRIGELLA--DYDLVAL 69 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVLQQSY 128 QE + + + + I + R + + Sbjct: 70 QEADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRNLGRIAQHSNGLLSRWRPSLLEDHPL 129 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 P R A+ + + V+ +HL ++Q Sbjct: 130 PGPPG---------RGAIFVRFGDGPDALVVVMMHLALG-------------ARTRTRQL 167 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++++ I V+ GD N + N L Sbjct: 168 AYIRELIGDY----RHQVLMGDMNTHAVD----------LLENSPLRDLGLMAPQVEATF 213 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + R + +D+ ++ + + + +SDH P+S++ Sbjct: 214 PSWRPQRNLDHILLSSDLALERVDV--------------LDQPISDHLPVSVEI 253 >gi|148984296|ref|ZP_01817591.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP3-BS71] gi|225859607|ref|YP_002741117.1| exodeoxyribonuclease III [Streptococcus pneumoniae 70585] gi|225861640|ref|YP_002743149.1| exodeoxyribonuclease III [Streptococcus pneumoniae Taiwan19F-14] gi|298230311|ref|ZP_06963992.1| exodeoxyribonuclease III [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254703|ref|ZP_06978289.1| exodeoxyribonuclease III [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503568|ref|YP_003725508.1| exodeoxyribonuclease III [Streptococcus pneumoniae TCH8431/19A] gi|147923585|gb|EDK74698.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP3-BS71] gi|225720715|gb|ACO16569.1| exodeoxyribonuclease III [Streptococcus pneumoniae 70585] gi|225726783|gb|ACO22634.1| exodeoxyribonuclease III [Streptococcus pneumoniae Taiwan19F-14] gi|298239163|gb|ADI70294.1| exodeoxyribonuclease III [Streptococcus pneumoniae TCH8431/19A] gi|301800627|emb|CBW33270.1| exodeoxyribonuclease [Streptococcus pneumoniae OXC141] gi|327390006|gb|EGE88351.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA04375] gi|332074195|gb|EGI84673.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA41301] Length = 275 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 77/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K ++P +GA S R Sbjct: 55 KHVEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAP-STMDLEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +V ++ + ++ L + Sbjct: 114 I-----ITLEFDAFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAEL--------DKEK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 VLEID 274 >gi|148989637|ref|ZP_01820969.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP6-BS73] gi|147924954|gb|EDK76036.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP6-BS73] Length = 275 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K S+P +GA S R Sbjct: 55 KHVEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDLEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +V ++ + + ++ L + Sbjct: 114 I-----ITLEFDAFFVTQVYTPNAGDGLKRLEERQVWDTKYAEYLAEL--------DKEK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 VLEID 274 >gi|317476874|ref|ZP_07936117.1| endonuclease/Exonuclease/phosphatase [Bacteroides eggerthii 1_2_48FAA] gi|316907049|gb|EFV28760.1| endonuclease/Exonuclease/phosphatase [Bacteroides eggerthii 1_2_48FAA] Length = 335 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 37/343 (10%), Positives = 90/343 (26%), Gaps = 61/343 (17%) Query: 1 MIRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSE-------QEGVSLWKNSVKRT 50 M + L F V + + + +N+ L + + L S + T Sbjct: 1 MRKVTFLFSFCFCVIVAVAQNTERKLYSIAFYNLENLFDTIHDAGKNDHDFLPDGSYQWT 60 Query: 51 TSDYT-----------LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99 Y L + ++ + E+ + + + + + Sbjct: 61 AKKYESKLHNLSMVLGSLSRNLVPEGPAVIGVAEVENRRVLTDLVSQPAISNYKFIHYEG 120 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + I A+ + V L + + R + + + +++ V Sbjct: 121 PDKR-----GIDCALLYDPQQFTVTNSKLVLSTPFEGDTVHLTRGFLIVDGRLADERVCV 175 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 + H S SP ++Q + L D + +++ + + GD N Sbjct: 176 IVNHWPSR-------GAKSPVRVHAAKQVKVLTDSL-LREDKKLKLFVMGDMNDDPMDES 227 Query: 220 N-----------------NDDFWKTIDPNDSLIRFPKEKDSRC------NANKNLRNKIP 256 + +WKT++ + K + + + Sbjct: 228 MQTLGARKYISGMKAKQFYNPWWKTLEDKGVGTLLYRGKWNLFDQIVLSRPLVKTKKGLR 287 Query: 257 IDY--FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 D+ + + + + SDH P Sbjct: 288 YDHNEVFIRDYLIQ--QDGKYKGSPLRTHGGRVWLNGYSDHLP 328 >gi|296217531|ref|XP_002755080.1| PREDICTED: 5'-tyrosyl-DNA phosphodiesterase-like [Callithrix jacchus] Length = 362 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 86/288 (29%), Gaps = 50/288 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 L++WN++ L + Y D+VFLQE+ Sbjct: 114 FSLMTWNVDGLDLNN-----------LAERARGVCSYLVLYSPDVVFLQEV--------- 153 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 +C + TAI ++K V++ Q + + R Sbjct: 154 --IPPYCSYLKKRAKNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTN-----MMR 206 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V ++G ++ ++ HL+S Q + + + + Sbjct: 207 NLLCVHVNVSGNELCLMTSHLESTKGH----------AKERMNQLKIVLKKMQE-APESA 255 Query: 204 PFVIAGDFNRK-------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + AGD N + N D W+ + ++ + N K+ Sbjct: 256 TVIFAGDTNLRDQEITKCGGLPSNIVDVWELL-GKPKHCQYTWDTQMNSNLGITAACKLR 314 Query: 257 IDYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D A + +I S + + G+ SDH + + D Sbjct: 315 FDRIFFRAAAEEGHIIPRSLDLLGL---EKLDCGRFPSDHWGLLCNLD 359 >gi|296197295|ref|XP_002746222.1| PREDICTED: 5'-tyrosyl-DNA phosphodiesterase-like [Callithrix jacchus] Length = 392 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 86/288 (29%), Gaps = 50/288 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 L++WN++ L + Y D+VFLQE+ Sbjct: 144 FSLMTWNVDGLDLNN-----------LAERARGVCSYLVLYSPDVVFLQEV--------- 183 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 +C + TAI ++K V++ Q + + R Sbjct: 184 --IPPYCSYLKKRAKNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTN-----MMR 236 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V ++G ++ ++ HL+S Q + + + + Sbjct: 237 NLLCVHVNVSGNELCLMTSHLESTKGH----------AKERMNQLKIVLKKMQE-APESA 285 Query: 204 PFVIAGDFNRK-------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + AGD N + N D W+ + ++ + N K+ Sbjct: 286 TVIFAGDTNLRDQEVTKCGGLPSNIVDVWELL-GKPKHCQYTWDTQMNSNLGITAACKLR 344 Query: 257 IDYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D A + +I S + + G+ SDH + + D Sbjct: 345 FDRIFFRAAAEEGHIIPRSLDLLGL---EKLDCGRFPSDHWGLLCNLD 389 >gi|157133993|ref|XP_001663108.1| carbon catabolite repressor protein [Aedes aegypti] gi|108870647|gb|EAT34872.1| carbon catabolite repressor protein [Aedes aegypti] Length = 465 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 39/342 (11%), Positives = 89/342 (26%), Gaps = 65/342 (19%) Query: 27 VSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 + +N+ + + ++ + + ++ ADI+ LQE+ + Sbjct: 1 MCYNVLCDKYATRQMYGYCPSWALSWEYRKKAILDEIRHYSADIISLQEVETDQFFNFFK 60 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 P+ + + +K S +D AI R ++++ + Sbjct: 61 PELKNDGYEGIFSPKSRAKTMSESDRKYVDGCAIFFRSSKFSLIKEHLVEFNQLAMANAE 120 Query: 141 GNRRAVELLVEINGKKIWV----------------------LDIHLKSFCFLDSLENTYS 178 G+ + ++ + + + + + + Sbjct: 121 GSDHMLNRVMPKDNIGLAALLKVKESAWEGVPPEQVAASQPILVCTAHIHWDPEFCDVKL 180 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPF-------VIAGDFNRKINYLGN----------- 220 +LS + + + D + F V+ GDFN + Sbjct: 181 IQTMMLSNELKTILDEVGHSFRPGHKFDVNNVQLVLCGDFNSLPDSGVIEFLSAGRVSMD 240 Query: 221 --------NDDFWKTIDPNDSLIRFPKEKDSRC--------NANKNLRNKIPIDYFVMDQ 264 + I D+ F N K IDY + Sbjct: 241 HQDFKELGYKSCLQRISNCDTPNEFTHSFKLASAYSEDIMPYTNYTFDFKGIIDYVFYSK 300 Query: 265 NA---YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 L S + N+ SDH P+ ++ + Sbjct: 301 QGMIPLGLLGPISSDWLRDNKVVGCPHPHIPSDHFPLLVELE 342 >gi|88813076|ref|ZP_01128318.1| exodeoxyribonuclease III [Nitrococcus mobilis Nb-231] gi|88789709|gb|EAR20834.1| exodeoxyribonuclease III [Nitrococcus mobilis Nb-231] Length = 267 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 33/310 (10%), Positives = 85/310 (27%), Gaps = 73/310 (23%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 S +++ + N+N + + + D++ +QE + Sbjct: 2 SAGMSLKITTLNLNGIRAAARKGFF---------------DWFARERPDVLCVQETKAQR 46 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 A +++ D+ ++ +A+ + ++ D Sbjct: 47 AQLDGNALFFPEGYHA-------FFHDAEQRGYSGVALYARQEPDEVRTGLGWPEIDREG 99 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R +E K+ V+ ++ S ++ + L D + Sbjct: 100 RW---------LEARFGKLSVVSFYMPSGTSGAQRQD-------FKYTFMEPLLDHLKSL 143 Query: 199 KESLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDS 243 E+ ++I GD+N +L + + + + + Sbjct: 144 CEAGREYIICGDWNIAHKPIDLKNWRSNQKNSGFLPEERAWLDRLFDEAGFVDAFRLVNL 203 Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + IDY ++ + + +R SD Sbjct: 204 EAEQYTWWSFRGQAWDNNTGWRIDYHMITPGLRERVRGAEI-----------YTAERFSD 252 Query: 295 HCPISIDYDF 304 H P+++ YD+ Sbjct: 253 HAPLTLAYDW 262 >gi|302338290|ref|YP_003803496.1| endonuclease/exonuclease/phosphatase [Spirochaeta smaragdinae DSM 11293] gi|301635475|gb|ADK80902.1| Endonuclease/exonuclease/phosphatase [Spirochaeta smaragdinae DSM 11293] Length = 250 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 76/287 (26%), Gaps = 49/287 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 L + NI ++ L + + DI QE+ + Sbjct: 7 FSLCTCNIWN-------------TEKWEQRKVALEDFLVRFNPDICCFQEIREETM--RF 51 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + I RK R + L + R Sbjct: 52 LDEAMPFHARVEDDFNGWRNEGN-------IYYRKDLFRETGHTELFLDMPEPDRRLF-- 102 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++L +G+K V +HL + + S ++A + W+ +K Sbjct: 103 -ILDLECLADGRKFQVCTVHLTH----QNNRDEQDTGTSYRHEEALKIARWLKNRKSDAP 157 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL------RNKIPI 257 P ++ GDFN + + + F + + N I Sbjct: 158 PLLLCGDFNDPWHPS-------RILAEAGLNDVFYELGLLQPPTFPNPALSEEIYMNETI 210 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D + L + +SDH P+ ++F Sbjct: 211 DRIMYGGGPLPVLASV-------VDFHGSGASCGVSDHKPVVAVFEF 250 >gi|255073017|ref|XP_002500183.1| predicted protein [Micromonas sp. RCC299] gi|226515445|gb|ACO61441.1| predicted protein [Micromonas sp. RCC299] Length = 590 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 39/355 (10%), Positives = 84/355 (23%), Gaps = 70/355 (19%) Query: 19 SVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 S ++++N+ + + E + + DADI+ LQE+ S Sbjct: 231 SEGGTFTVLTYNVLADLYATSEMYGYTPQWALSWNYRRQNILKEIVMHDADILCLQEVQS 290 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV--------RVLQQSY 128 + + + + + + A+ K V Sbjct: 291 DHFEDFFAGELAKAGYTAVYKKKTAQVFSQGTYVIDGCAIFFKKDRFTLIKKYEVEFNKA 350 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF-----------CFLDSLENTY 177 L + + + A+ L++ N I VL+ + C ++ + Sbjct: 351 ALSLVESLGGSSQKKDALNRLMKDNVALIVVLEALEQPGVQAPQGKRQLLCVANTHIHAN 410 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLV-PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + + Q L + + S P V+ GDFN ++ Sbjct: 411 TELNDVKLWQVHTLLKGLEKIAASAEIPMVVCGDFNSVPGSAA-HNLLSNGRVDGAHPEL 469 Query: 237 FPK---------------------------------------------EKDSRCNANKNL 251 N Sbjct: 470 ATDPFGILRPPSKLQHPLPLVSAYTALTKQPCLESEAAERQRTRMDAQGTGEPIFTNCTK 529 Query: 252 RNKIPIDYFVMDQNAYKFLIQESF--SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +DY + L + N+ + SDH + ++ + Sbjct: 530 DFFGTLDYIFYTDDTLAPLSLLELPSEKECRNKYGGLPNTQCSSDHVALMAEFQW 584 >gi|225567928|ref|ZP_03776953.1| hypothetical protein CLOHYLEM_04001 [Clostridium hylemonae DSM 15053] gi|225163216|gb|EEG75835.1| hypothetical protein CLOHYLEM_04001 [Clostridium hylemonae DSM 15053] Length = 350 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 35/319 (10%), Positives = 90/319 (28%), Gaps = 60/319 (18%) Query: 20 VAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 ++++N G + +S + + + + AD+ FL Sbjct: 50 AGDTFTVLTYNTGYAGLSRDEDFFMDGGEKVMPDSRELVEHNLKGITSVLREQKADVYFL 109 Query: 72 QEMGSYNAVAKVFPKNTWC---------IFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 QE+ + + + + Y+ + + + + Sbjct: 110 QEVDLDSKRSYHLNEKEYYEKELGLPGIFAYNFKCDYVPYPLPPIGKVESGLLTMTGIGM 169 Query: 123 VLQQSYPLLGAKDSFSRAGN--RRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYS 178 L + + N R +E + + G K++ +++ HL+++ Sbjct: 170 SEASRISLPESFTWPVKTCNLKRCMLETRIPVGGGDKELVLINFHLEAY----------- 218 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI---------D 229 S Q++ L + + + + GDFN+ + + D Sbjct: 219 DSGEGKIAQSKMLAQKLETEYKKGNYVIAGGDFNQTFEDMDKYPVHSRDNWTPGVVGKDD 278 Query: 230 PNDSLIRFPKEKDSRCN-------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + + C N +D F++ N ++ ++ Y Sbjct: 279 IPEGFSFAVSDNAPTCRLLNGPYSGNYEDSQVYVLDGFIVSDNVEVKELENIDTQFEYT- 337 Query: 283 DDIKSRGKRLSDHCPISID 301 DH P+ ++ Sbjct: 338 -----------DHQPVRME 345 >gi|167561089|ref|ZP_02354005.1| exodeoxyribonuclease III [Burkholderia oklahomensis EO147] gi|167568307|ref|ZP_02361181.1| exodeoxyribonuclease III [Burkholderia oklahomensis C6786] Length = 256 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 85/305 (27%), Gaps = 75/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++ N+N + + + +AD V +QE+ KV Sbjct: 2 LRVITANLNGIRSAAKKGFF---------------DWLGEQNADCVCVQEI-------KV 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + F ++ A ++ ++G S + R Sbjct: 40 SADDLPAEFVEPHGFRSYFHHAEKKGYSGAGLYLRREP-----DDVIIGYGSSEFDSEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 VE K+ V+ +++ S D + L ++ Sbjct: 95 Y-----VEARFGKLSVVSVYVPSGSSGDERQQAKYRFMDEFMPHLAEL--------KAKR 141 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N + + + + + + + D+R Sbjct: 142 EVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTKLFDDVGYVDVFRTLDARPEQY 201 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY + + S R + SDH P++ Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPGIAGTAKRTSI-----------FRDIKFSDHAPLT 250 Query: 300 IDYDF 304 +DYD+ Sbjct: 251 VDYDY 255 >gi|170092721|ref|XP_001877582.1| predicted protein [Laccaria bicolor S238N-H82] gi|164647441|gb|EDR11685.1| predicted protein [Laccaria bicolor S238N-H82] Length = 615 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 42/350 (12%), Positives = 79/350 (22%), Gaps = 67/350 (19%) Query: 19 SVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 A+ R++ +NI + + + L+ N AD + LQE+ Sbjct: 264 PNAETFRVLCYNILCERCATERLYGYTPSWALAWEYRKDLILTEIINSGADFLCLQEVDI 323 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDS--NNDIHTAIAVRKK-------------NV 121 + + S+ + + A K Sbjct: 324 AAYEDYFTKNLAEHGYEGVYWPKSRSRTMNEADRRQVDGCATFYKADRYQLVEKHLVEFS 383 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 V Q D F+R + + ++ + + I + + + Sbjct: 384 AVAMQRQDFKKTDDMFNRVLGKEHLAIVSLMEDKVTGTRFVIANAHIHWDPAYCDVKLVQ 443 Query: 181 CSLLSQQAQWLKDWITQKKESLV------------------------PFVIAGDFNRKIN 216 +LL + + + + P +I GDFN Sbjct: 444 AALLVDEIEKMASHFAKYPPRPPPSASTSSIVQAYRTPPVYTDGTKIPLIICGDFNSIP- 502 Query: 217 YLGNNDDFWKTIDPNDSLIR-----------------------FPKEKDSRCNANKNLRN 253 G D P D + N Sbjct: 503 SSGVYDFLSNGTLPADHVDFKSHKYGRYTSEGLRHRFGLKSAYAAPGAGEPPVTNYVPTF 562 Query: 254 KIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + IDY N I + + SDH I ++ Sbjct: 563 QGHIDYLWYSAANLGVNAILSGVDKDYLEKVVGFPNAHFPSDHVCIVAEF 612 >gi|71910153|ref|YP_281703.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS5005] gi|71852935|gb|AAZ50958.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS5005] Length = 303 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 38/327 (11%), Positives = 90/327 (27%), Gaps = 57/327 (17%) Query: 3 RKYVLALVFFLVPCTASVA-QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 + +++ + + +++L+SWNI++L+ + + R + Sbjct: 7 KSLIVSFFVTITTRLSVRKRNQMKLISWNIDSLNAALTGESPRALLSR------AVLDTL 60 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 DADI+ +QE T ++ + S + + KN Sbjct: 61 VAQDADIIAIQETKLSAKGPTKKHIETLLSYFPNYLHVWRSSVEPARKGYAGTMFLYKNT 120 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 ++P +GA + G ++ + + +V ++ + + Sbjct: 121 LNPVITFPEIGAPTTMDAEGR------IITLEFEDFFVTQVYTPNAGDGLRRLDDRQIWD 174 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWK 226 + L ++ P + GD+N R + + Sbjct: 175 HKYADYLTEL--------DAQKPVLATGDYNVAHKEIDLANPNSNRRSPGFTDEERQGFT 226 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFS 276 + F + + IDY++ + + Sbjct: 227 NLLARGFTDTFRHVHGDIPHVYTWWAQRSKTSKINNTGWRIDYWLASNRLVDKVKRSEMI 286 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303 + DH PI +D D Sbjct: 287 SSGERQ-----------DHTPILLDID 302 >gi|325913687|ref|ZP_08176049.1| exodeoxyribonuclease III [Lactobacillus iners UPII 60-B] gi|325477046|gb|EGC80196.1| exodeoxyribonuclease III [Lactobacillus iners UPII 60-B] Length = 275 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 84/303 (27%), Gaps = 56/303 (18%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 +SWNI++L+ + R+ + K + D+V +QE Sbjct: 3 FISWNIDSLNAALTGDSDRAHETRS------VLNKIKEANPDVVAIQETKLRANGPTKKH 56 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + + + S ++ + K Q SYPL+GA D+ + G Sbjct: 57 CDILADIFEDYQYVWRSSQEPARKSYAGTMFLYKKNYHPQVSYPLIGAPDTMDQEGR--- 113 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++ + ++ ++ + + + L P Sbjct: 114 ---IITLEFNSFYLTQVYTPNSGNELKRLADREIWDTKYQEYLTKLDQ--------NKPV 162 Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + +GD+N + + + F + Sbjct: 163 IASGDYNVAHQEIDLKHPETNHHNAGFTDEERKGFSKLLSLGFIDTFRYINGDITDVYSW 222 Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY+++ Q + Q + + DHCPI + Sbjct: 223 WSQRIRTSKTNNSGWRIDYYLVSQRLADKIEQSKMIDTGDRK-----------DHCPILL 271 Query: 301 DYD 303 D Sbjct: 272 KID 274 >gi|312873321|ref|ZP_07733376.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 2052A-d] gi|311091201|gb|EFQ49590.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 2052A-d] Length = 275 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 84/303 (27%), Gaps = 56/303 (18%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 +SWNI++L+ + R+ + K + D+V +QE Sbjct: 3 FISWNIDSLNAALTGDSDRAHETRS------VLNKIKEANPDVVAIQETKLRANGPTKKH 56 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + + + S ++ + K Q SYPL+GA D+ + G Sbjct: 57 CDILADIFEDYQYVWRSSQEPARKSYAGTMFLYKKNYHPQVSYPLIGAPDTMDQEGR--- 113 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++ + ++ ++ + + + L P Sbjct: 114 ---IITLEFNSFYLTQVYTPNSGNELKRLADREIWDTKYQEYLTKLDQ--------NKPV 162 Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + +GD+N + + + F + Sbjct: 163 IASGDYNVAHQEIDLKHPETNHHNAGFTDEERKGFSKLLSLGFIDTFRYINGDITDVYSW 222 Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY+++ Q + Q + + DHCPI + Sbjct: 223 WSQRIRTSKTNNAGWRIDYYLVSQRLADKIEQSKMIDTGDRK-----------DHCPILL 271 Query: 301 DYD 303 D Sbjct: 272 KID 274 >gi|228899090|ref|ZP_04063362.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 4222] gi|228860531|gb|EEN04919.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 4222] Length = 263 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 35/269 (13%), Positives = 73/269 (27%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 18 EKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGLLLLEELKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ + + ++ + +D+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK-TRKIVSTTLAYNGKDITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKGQVDRLMERVD----SNKLAFLMGDFNNNARLKG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +Q S Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHSLRIDLILCNQ---------S 233 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +SDH + + D Sbjct: 234 KKVHSSKVIFNGTNRNVISDHFGVEVQLD 262 >gi|114704450|ref|ZP_01437358.1| putative Endonuclease/Exonuclease/phosphatase family protein [Fulvimarina pelagi HTCC2506] gi|114539235|gb|EAU42355.1| putative Endonuclease/Exonuclease/phosphatase family protein [Fulvimarina pelagi HTCC2506] Length = 248 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 89/286 (31%), Gaps = 54/286 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +R+VSWNI+ +R + + + DI+ LQE+ Sbjct: 9 PGTLRIVSWNIHG-----------AIGRRRRPNPERTIAEIERMAPDILILQEVDGRTMF 57 Query: 81 AKVFPKNTWC--IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF- 137 + + + + + TA +L +P+ ++ Sbjct: 58 GRAAGAFEYVTGALWERLPRETEERASHIVEARTADWPSDDIGNLLWSRFPVSSSRIIDL 117 Query: 138 --SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 NR+ +E +VE+ G+++ VL HL + +QA+ + D + Sbjct: 118 PGPDIENRKVIEAIVELGGRRLRVLGTHLALLP-------------TTRLKQARTIVDHL 164 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 T +P V+ GD N + F + R PK R + Sbjct: 165 TGI--DHLPTVLGGDLN---------EWFPNGWVHSTLSCRLPKVHAPRTWPERVPI--A 211 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 P+D F Q+ SDH ISID Sbjct: 212 PLDRFYASQDVEIVARGTDAR------------AGVASDHRAISID 245 >gi|91792122|ref|YP_561773.1| endonuclease/exonuclease/phosphatase [Shewanella denitrificans OS217] gi|91714124|gb|ABE54050.1| Endonuclease/exonuclease/phosphatase [Shewanella denitrificans OS217] Length = 379 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 40/375 (10%), Positives = 91/375 (24%), Gaps = 90/375 (24%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQE 73 ++ A ++R+ S N+ S + + + + AD+V QE Sbjct: 2 SSLEASQIRIASINLFNFIAPPDAYYDFENIYSQDQWAKKLAWFKAFFEENPADVVGFQE 61 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR---VLQQSYPL 130 + S + + + + ++ A+A R V V Sbjct: 62 VFSPDELQSLMASLGYP-HFAVLDSAELIGDYVYKSPVVALASRFPIVEMALVTPAPQLC 120 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFL------------------- 170 + +R+ + + + + V +HLKS Sbjct: 121 QHIGVLADFSFSRKPLRATLALPQIGLCDVYVVHLKSKRSDLGQGSELVTDLNGGADLMA 180 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG----------- 219 + + ++ A + +++ S P ++ GDFN ++ Sbjct: 181 RQALGRVASNLQRATEAALLFHQIMLRRQNSSQPVILLGDFNDSLSSSALEAFKVTPKQI 240 Query: 220 ----------------------------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245 + D + D Sbjct: 241 YRADIEDKALKAMFEAQLTQALNHFCLFDSYDLHRHSVKLNQNLLQDEFESSASDADQEI 300 Query: 246 NANKNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYNEDDIK------S 287 + + L + +DY ++ + Y D Sbjct: 301 SPSLKLDSWQRASTHYFGNTGSVLDYILVSSEFDASQNASLAEVVNYQTFDRHLVRPDYE 360 Query: 288 RGKRLSDHCPISIDY 302 R +DH P+ + Sbjct: 361 RDNMSTDHAPVMMTL 375 >gi|86742342|ref|YP_482742.1| endonuclease/exonuclease/phosphatase [Frankia sp. CcI3] gi|86569204|gb|ABD13013.1| Endonuclease/exonuclease/phosphatase [Frankia sp. CcI3] Length = 356 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 36/288 (12%), Positives = 78/288 (27%), Gaps = 64/288 (22%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 A ++R++S N+ ++ L + + D++ L E Sbjct: 128 APQGAARLRVMSANLLYYNDH----------------ADRLGAQIRAANPDVLVLVE--- 168 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + P + S + AV + + + GA Sbjct: 169 ------LSPLTLARVTSSGALASYRYREVHPEPGAFGAAVFSRFPLHDAAAPIVGGAMS- 221 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + VE++ ++ +V+ + + + L Q + Sbjct: 222 ---------LRATVEVDERRRFVVYAVHTISPTTSAYTDRWRTQLDTLRAQLE------- 265 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--RNK 254 + +P V+AGDFN ++ + +K+L Sbjct: 266 ---HATLPVVMAGDFNATRDHRPFRRLVNSGVRD---AHDVVGGGWQPTWNSKSLILPPV 319 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ + + + G SDH P+ D Sbjct: 320 LRIDHVLASPA--------------FAVTGFEVGGDFGSDHRPVIADL 353 >gi|325954719|ref|YP_004238379.1| endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922] gi|323437337|gb|ADX67801.1| Endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922] Length = 400 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 35/293 (11%), Positives = 70/293 (23%), Gaps = 44/293 (15%) Query: 46 SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 + +R + + + D I+ L E+ + + + + Sbjct: 111 TSQRYNQKVNNIARVLSEIGTDVTKVPPVIIGLCEIENSQNMIDIANSPFLNKY---NYG 167 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVL-QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 + H + + +K V + YP+ SR R + + ++G++I Sbjct: 168 VVHFNSFDARGVDVGLMYQKDRFTVTYARPYPIFNYDKDGSRRYTRDILLVTGLLDGEEI 227 Query: 158 WVLDIHLKSFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216 L H S + + + ++ LK K + GDFN Sbjct: 228 SFLVNHWPSRSGGEKVSMPGRIEAAKVMRGIFDELKQ-----KNPNAKVIAMGDFNDDPV 282 Query: 217 YLGNNDDFWKT-----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF-- 269 + F + K D F+ + Sbjct: 283 SPSIRNTFKAAADKSSVKEGGYYNPMTKLFKKGYGTLAYRDAWNLFDQFIFTASLVTKEN 342 Query: 270 -------------------LIQESFSEILYNEDDIKSR-GKRLSDHCPISIDY 302 + Y + SDH PI Sbjct: 343 DFSSYRIFKTEIFTRDYLITKDGQWKGTPYRMWSGDTYRADGYSDHFPIYTIL 395 >gi|313228884|emb|CBY18036.1| unnamed protein product [Oikopleura dioica] Length = 515 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 36/328 (10%), Positives = 92/328 (28%), Gaps = 49/328 (14%) Query: 24 VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++ +N+ + ++ + R L+ + DAD++ LQE+ + Sbjct: 182 FSVMCYNVLSDKYCTRQMYGYSPSWCLRWEHRQRLIFEEMFTYDADVLCLQEVETCEFNN 241 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 P+ + + +K ++ AI + + +L+ Sbjct: 242 TFLPELRKHGYMGVFSPKSRAKTMIESESQNVDGCAIFWKTEKFLLLENHTFEFNQLAIK 301 Query: 138 SRAGNRRAVELLVEINGKKIWV-------------LDIHLKSFCFLDSLENTYSPSCSLL 184 + G++ + ++ + + V + + + + LL Sbjct: 302 NSGGDQDILNRVMTKDNVAVAVVLKTMKGQEDTQEIVVCNTHMHWDPEFSDVKMIQTFLL 361 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL----------GNNDDFWKTIDPNDS- 233 + + + + +K + VP ++ GD+N + N ++ + N Sbjct: 362 TTELDRVIRQM-GRKPTDVPVILCGDYNSLPSSGVTEFVKEGKVELNHPEFQRFNYNKKL 420 Query: 234 -----------------LIRFPKEKDSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESF 275 F + N K IDY + I Sbjct: 421 VKMNPKNGEVFWQFRFCFNLFSYLPELMPFTNYTYDFKGIIDYIYHSSPHLKTIGILGGL 480 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 + SDH + +++ Sbjct: 481 DDSYRRSVVGFPNPVIPSDHLCLLSEFE 508 >gi|229495737|ref|ZP_04389465.1| endonuclease/exonuclease/phosphatase [Porphyromonas endodontalis ATCC 35406] gi|229317311|gb|EEN83216.1| endonuclease/exonuclease/phosphatase [Porphyromonas endodontalis ATCC 35406] Length = 319 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 44/298 (14%), Positives = 89/298 (29%), Gaps = 38/298 (12%) Query: 26 LVSWNINTLSE--QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +WNI + + +S +S +R + + + D++ +QE+ S + + Sbjct: 37 IATWNIRGFGDLTRSWMSKEGDSPRRDLHSVHCIAEILRRF--DVIAIQEVKSN--IRAL 92 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV--------RVLQQSYPLLGAKD 135 + L + ++ + N A + V V+ + +K+ Sbjct: 93 RDTLKILGDEWSMILTDVNQGSAGNGERMAYLFDTRRVNLSGLAGELVVPDEWRSGVSKN 152 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R + + ++ +H+ S L AQWL W Sbjct: 153 VMQEQFVRSPYAVSFRSKHQTFILVTLHVLYG-------KKSSDRIKELKGIAQWLSSWA 205 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 +I GDFN + D +T P+ S+ + + Sbjct: 206 KDINAYHQNLIILGDFNIE----ARGDLLAETFLSEGLY--IPEGLQSKEVSRSIFNDTK 259 Query: 256 PIDYF--VMDQNAYKFLIQESFSEILYNEDDIKSRGK---------RLSDHCPISIDY 302 D N L E Y+ + + LSDH P+ ++ Sbjct: 260 FYDQIAWFNGSNGQPKLSLEFVRGGSYDFVATALKNRGLTKQKLSFMLSDHYPLWAEF 317 >gi|156095454|ref|XP_001613762.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148802636|gb|EDL44035.1| hypothetical protein, conserved [Plasmodium vivax] Length = 2718 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 39/385 (10%), Positives = 95/385 (24%), Gaps = 97/385 (25%) Query: 15 PCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + + +++WN+ E + + T + Q N DIV LQ Sbjct: 2333 STVTNPHNQFTIMTWNVLAEIYGTIEAFPHCDPYMLAWSYRKTKIIQEILNNSPDIVCLQ 2392 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLI---------NHSKRDSNNDIHTAIAVRKKNVRV 123 E+ + + + P + + + AI KK ++ Sbjct: 2393 EIQNEHFLDFFKPSLGEFGYEGVYKQKTKEIFTSPSGKRRGGKYTIDGCAIFYNKKKLKF 2452 Query: 124 LQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGKKIWVLDIHLKSFCF------- 169 ++ + ++ + + + +L +++ + Sbjct: 2453 VETYALEFSKLIKEASVFTLPKEIQKNPSLVKRLLKDNVALVILLEYIQQYSKMYEGKDD 2512 Query: 170 --------------LDSLENTYSPSCSLLSQQAQWLKDWIT-------QKKESLVPFVIA 208 ++ + + QAQ L + +K E++ +I Sbjct: 2513 DEEEEKPNKNLLIVANTHIVANPEANYVKIWQAQILVKVVEYLKINFIKKYETVPSLIIC 2572 Query: 209 GDFNRKINYL----------------------------------------GNNDDFWKTI 228 GDFN + + + + Sbjct: 2573 GDFNSTPSSAVYQLIYKKTCSRSHEDFSSDKYSLLTDLPLGHNLNLKSAYAISKLLSQKL 2632 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 +P + N +DY + + + ++ + Sbjct: 2633 NPEEYTSNLE--IFEPLFTNYTGNFIGCLDYIFYNDENLNIISTVNIADENQLMQEAHIY 2690 Query: 289 GK---------RLSDHCPISIDYDF 304 R SDH P+ ++F Sbjct: 2691 QLSNCALPSPIRPSDHLPLIAKFEF 2715 >gi|221201880|ref|ZP_03574917.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2M] gi|221207614|ref|ZP_03580622.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2] gi|221172460|gb|EEE04899.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2] gi|221178300|gb|EEE10710.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2M] Length = 256 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 84/305 (27%), Gaps = 75/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++ N+N + + + +AD V +QE+ KV Sbjct: 2 MRVITANLNGIRSAAKKGFF---------------DWLGEQNADCVCVQEI-------KV 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + F + L ++ + A ++ ++G S R Sbjct: 40 SADDLPAEFVAPHGLKSYFHHAAKKGYSGAGLYSRREP-----DDVIIGFGSSEFDPEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 VE K+ V+ +++ S D + L + Sbjct: 95 Y-----VEARYGKLSVVSVYVPSGSSGDERQQAKYRFMDEFMPHLAAL--------KKTR 141 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N + + + + + + + D R Sbjct: 142 EVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLSKLFDDVGYVDVFRTLDPRPEQY 201 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY + S + + SDH P++ Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPGVAATAKSTSI-----------FKDIKFSDHAPLT 250 Query: 300 IDYDF 304 +DYD+ Sbjct: 251 VDYDY 255 >gi|145511051|ref|XP_001441453.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124408703|emb|CAK74056.1| unnamed protein product [Paramecium tetraurelia] Length = 374 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 51/323 (15%), Positives = 87/323 (26%), Gaps = 90/323 (27%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL------Q 72 K+++ SWNIN L R +S Y + + DI+ L Q Sbjct: 100 FSQDKLKISSWNINGL--------------RASSKKESAVSYLNDKNFDIICLNELKVAQ 145 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E + PK+ + + + ++ ++ +A+ K + + + Sbjct: 146 EAFEKENLITKLPKD-YFAYLNFCKIKA---------GYSGVAILSKVKPISIKYDMGIE 195 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWL 191 D R + +K ++ ++ + LD L L Sbjct: 196 KHDQEGRI---------ITAEFEKFNLVACYVPNSGDKLDRLNYRTQEWDVDFQNYLDKL 246 Query: 192 KDWITQKKESLVPFVIAGDFNRKINY------------------------LGNNDDFWKT 227 K +I GD N D F K Sbjct: 247 KQ--------TKNTIICGDLNVSHTEIDLANPEGNKRSAGQLIIYDQRFTQEERDSFSKF 298 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILY 280 + + + R IDYFV++Q A +IQ + Sbjct: 299 LSKGWIDTFRHLHPKEIKYSYFSPRFNSRETNKGWRIDYFVVNQEAVGSVIQSDIKTTIL 358 Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303 SDH PI D D Sbjct: 359 -----------GSDHVPIECDID 370 >gi|83720785|ref|YP_440709.1| exodeoxyribonuclease III [Burkholderia thailandensis E264] gi|167579381|ref|ZP_02372255.1| exodeoxyribonuclease III [Burkholderia thailandensis TXDOH] gi|167617482|ref|ZP_02386113.1| exodeoxyribonuclease III [Burkholderia thailandensis Bt4] gi|257140643|ref|ZP_05588905.1| exodeoxyribonuclease III [Burkholderia thailandensis E264] gi|83654610|gb|ABC38673.1| exodeoxyribonuclease III [Burkholderia thailandensis E264] Length = 256 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 87/307 (28%), Gaps = 79/307 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+++ N+N + + ++ +AD V +QE + + + A Sbjct: 2 LRVITANLNGIRSAAKKGFF---------------EWLGEQNADCVCVQEIKVSADDLPA 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + ++ + +S + + +G S A Sbjct: 47 EFVGPHGFRSYFHHAQKKGYSGAGLYSRREPDDVI--------------IGYGSSEFDAE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R VE K+ ++ +++ S D + L +S Sbjct: 93 GRY-----VEARFGKLSIVSVYVPSGSSGDERQQAKYRFMDEFMPHLAEL--------KS 139 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD N + + + + + + DSR Sbjct: 140 KREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTKLFDEVGYVDVFRTLDSRPE 199 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + S R + SDH P Sbjct: 200 QYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKGTSI-----------FRDIKFSDHAP 248 Query: 298 ISIDYDF 304 +++DYD+ Sbjct: 249 LTVDYDY 255 >gi|297194729|ref|ZP_06912127.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|197722940|gb|EDY66848.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length = 343 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 50/300 (16%), Positives = 86/300 (28%), Gaps = 72/300 (24%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 L L L+ +A+ + + + N+N + G + + A Sbjct: 112 LNLFGGLLGESAATGGDLTIATHNVNADNPDPGGT----------------AEDVAAAGA 155 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D++ LQE+ + A + S + + L Sbjct: 156 DVLALQELPAGQVTA-------YEEALSATYPHHAVEGTVG----------------LWS 192 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLS 185 YPL R G RA+ V G + V H+ S L + S Sbjct: 193 KYPLTDTSPVDIRMGWTRAMRATVATPGGDVAVYVAHMPSVRVKLHAGFTANQRDNS--- 249 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 A L + I + E L V+ GD N +N ++++ S +R + Sbjct: 250 --ADALGEAIAR--ERLDRVVLLGDLNGTMND--------RSLNAVTSQMRSTQGAAGDG 297 Query: 246 NANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID ++ + S + SDH PI+ D Sbjct: 298 FGFSWPAAFPMARIDQIMVRG-----VEPVSSWTLPRTN----------SDHLPIAARVD 342 >gi|118098153|ref|XP_425256.2| PREDICTED: similar to deoxyribonuclease I-like 2 short form [Gallus gallus] Length = 278 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 78/288 (27%), Gaps = 33/288 (11%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 +R+ ++NI +S S ++ + DIV +QE+ + Sbjct: 18 PATAVLRIGAFNIQAFG---------DSKMSDESVADVIINILRRY--DIVLVQEVRDSD 66 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 A S+ S ++ + V Sbjct: 67 LSAVTELLEQLNSVSSSPYDYEISGPLGRDNYKEMYLFIYRTDAVSVVDTYQYEDP---Q 123 Query: 139 RAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 +R L V K + + L S + + + +L + W Sbjct: 124 DIFSREPFVLRVSAPHSKAEEFVMVPLHS-----APHDAVAEIDALYDVYLAVVNKW--- 175 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 V GDFN +Y+ +D + +D + + Sbjct: 176 ---GTDNIVFLGDFNADCSYVKQSDWASIRLRSSDVFKWLIPDSADTTVGKSDCAY---- 228 Query: 258 DYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 D V+ + ++ S + + + + L SDH P+ + Sbjct: 229 DRIVVCGAKLKRSIVPNSATVYNFQRAFQLEQEEALAVSDHYPVEVKL 276 >gi|13472526|ref|NP_104093.1| hypothetical protein mlr2853 [Mesorhizobium loti MAFF303099] gi|14023272|dbj|BAB49879.1| mlr2853 [Mesorhizobium loti MAFF303099] Length = 246 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 40/276 (14%), Positives = 82/276 (29%), Gaps = 53/276 (19%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + S+N++ + D + + +D D++ LQE + Sbjct: 19 VASYNVHKCIGVDRKF-----------DPERTSRVIREIDPDVIALQEADNRFGDRDGLL 67 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + S + H + + KK V L G R A Sbjct: 68 DLPRLERETGLVPVPISATGKGHGWHGNVLLFKKGVVRDVHQIRLPGL-------EPRGA 120 Query: 146 VELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 V +E+NG + + ++ HL SQQA+ + D ++ P Sbjct: 121 VVAEIELNGSETLRIIAAHLGLLRHS-------------RSQQARVVLDLMS--SPDEKP 165 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 ++ GD N + ++L + + + +D + ++ Sbjct: 166 TLLLGDLN---------EWRLGNRSALNTLHATFGPQPPAVPTFPSNLPLLALDRIMTNR 216 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + I E + SDH P++ Sbjct: 217 HGM----------IAAVEAHDTPLSRVASDHLPLTA 242 >gi|15600681|ref|NP_254175.1| hypothetical protein PA5488 [Pseudomonas aeruginosa PAO1] gi|107104590|ref|ZP_01368508.1| hypothetical protein PaerPA_01005669 [Pseudomonas aeruginosa PACS2] gi|116053638|ref|YP_793965.1| hypothetical protein PA14_72430 [Pseudomonas aeruginosa UCBPP-PA14] gi|218894591|ref|YP_002443461.1| putative hydrolase [Pseudomonas aeruginosa LESB58] gi|254237831|ref|ZP_04931154.1| hypothetical protein PACG_03928 [Pseudomonas aeruginosa C3719] gi|254243040|ref|ZP_04936362.1| hypothetical protein PA2G_03828 [Pseudomonas aeruginosa 2192] gi|296392353|ref|ZP_06881828.1| putative hydrolase [Pseudomonas aeruginosa PAb1] gi|313111571|ref|ZP_07797370.1| hypothetical protein PA39016_003370046 [Pseudomonas aeruginosa 39016] gi|9951822|gb|AAG08873.1|AE004961_8 hypothetical protein PA5488 [Pseudomonas aeruginosa PAO1] gi|115588859|gb|ABJ14874.1| putative hydrolase [Pseudomonas aeruginosa UCBPP-PA14] gi|126169762|gb|EAZ55273.1| hypothetical protein PACG_03928 [Pseudomonas aeruginosa C3719] gi|126196418|gb|EAZ60481.1| hypothetical protein PA2G_03828 [Pseudomonas aeruginosa 2192] gi|218774820|emb|CAW30638.1| putative hydrolase [Pseudomonas aeruginosa LESB58] gi|310883872|gb|EFQ42466.1| hypothetical protein PA39016_003370046 [Pseudomonas aeruginosa 39016] Length = 292 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 35/294 (11%), Positives = 79/294 (26%), Gaps = 62/294 (21%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71 ++RL+S+NI E + + ++ + + D D+V L Sbjct: 30 PDDGRLRLLSFNIQVGISTERYRHYLTRGWQHLLPHAGRATNLKRIGELLA--DYDLVAL 87 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVLQQSY 128 QE + + + + I + R + + Sbjct: 88 QEADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRNLGRIAQHSNGLLSRWRPTLLEDHPL 147 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 P R A+ + + V+ +HL ++Q Sbjct: 148 PGPPG---------RGAIFVRFGEGADALVVVMMHLALG-------------ARTRTRQL 185 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++++ I V+ GD N + N L Sbjct: 186 AYIRELIGDY----RHQVLMGDMNTHAVD----------LLENSPLRDLGLMAPQVEATF 231 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + R + +D+ ++ + + + +SDH P+S++ Sbjct: 232 PSWRPQRNLDHILLSSDLALERVDV--------------LDQPISDHLPVSVEI 271 >gi|315917346|ref|ZP_07913586.1| metal-dependent hydrolase [Fusobacterium gonidiaformans ATCC 25563] gi|313691221|gb|EFS28056.1| metal-dependent hydrolase [Fusobacterium gonidiaformans ATCC 25563] Length = 269 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 37/299 (12%), Positives = 92/299 (30%), Gaps = 54/299 (18%) Query: 22 QKVRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +K++L++ N++ L ++ LL + D++ LQE+ Sbjct: 3 KKMKLLTINVHSWL------------EEKQEEKMELLAKVIAEKRYDVIALQEVNQKIEA 50 Query: 81 AKVFPKNTWCIFYS------------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + + F + IA+ ++ + ++ + Sbjct: 51 RLLKGEIREDNFLYQLCKKIEKYTEEKYEYHWSHSHIGFDIYEEGIALLTRHSILEKEDF 110 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 +K +S + +R+ V++ +EI GK+I H+ ++ + Sbjct: 111 YCTNSKTVYSIS-SRKIVKIFLEIEGKEIEFYSCHMNLPDCIEENMEQNIQN-------- 161 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRK--INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 I + ++ GDFN + + + + +L + + + Sbjct: 162 ------ILKHSSRNCLKILMGDFNTDAFHDESSYQKILEQGLFDSYTLSKKKDDGVTVYK 215 Query: 247 ANKNLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N + +DY + + F+ Y +SDH + + Sbjct: 216 NISGWENSVEEKRLDYIFLTEQYEVESSYVIFNGKNYPC---------ISDHNGLEVIL 265 >gi|203284438|ref|YP_002222178.1| exodeoxyribonuclease III [Borrelia duttonii Ly] gi|201083881|gb|ACH93472.1| exodeoxyribonuclease III [Borrelia duttonii Ly] Length = 254 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 78/304 (25%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81 + L+SWN+N + + DI+ LQE + Sbjct: 2 MNLISWNVNGIRAVSNKGF---------------LNFIAEYSPDILCLQETKALKEQLPR 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + ++S S ++ +A+ K + L Sbjct: 47 ELIDIEGYYSYFSK----------SIIKGYSGVAIYSKIEPI-----KLENMNIEIFDRE 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + +++ + + + + + L+ S Sbjct: 92 GRCIIA-----HYHDFILINAYFPN-------SQSLRKRLNYKLEFLMSLESIANSFVTS 139 Query: 202 LVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ GDFN + + ++ K+ Sbjct: 140 GKNLIVCGDFNIAHTEIDLSNPKTSRESAGFYVEETNWMDNFLNRGYVDTFRMFNKEPGN 199 Query: 246 NANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + IDYFV+++ + + SDHCP+ Sbjct: 200 YTWWDYKTRARERNVGWRIDYFVINKAFQSKVKDALILNKV-----------MGSDHCPV 248 Query: 299 SIDY 302 + Sbjct: 249 FLKL 252 >gi|75759165|ref|ZP_00739268.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74493327|gb|EAO56440.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 267 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 35/269 (13%), Positives = 73/269 (27%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 22 EKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGLLLLEELKALHVKDYNIT 81 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ + + ++ + +D+ R+ V + NGK I Sbjct: 82 WDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK-TRKIVSTTLAYNGKDITF 140 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 141 YSCHLGW----------WNDEEESFKGQVDRLMERVD----SNKLAFLMGDFNNNARLKG 186 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +Q S Sbjct: 187 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHSLRIDLILCNQ---------S 237 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +SDH + + D Sbjct: 238 KKVHSSKVIFNGTNRNVISDHFGVEVQLD 266 >gi|107024036|ref|YP_622363.1| exodeoxyribonuclease III (xth) [Burkholderia cenocepacia AU 1054] gi|116691123|ref|YP_836746.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia HI2424] gi|170734454|ref|YP_001766401.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia MC0-3] gi|254246884|ref|ZP_04940205.1| AP endonuclease, family 1 [Burkholderia cenocepacia PC184] gi|105894225|gb|ABF77390.1| exodeoxyribonuclease III (xth) [Burkholderia cenocepacia AU 1054] gi|116649212|gb|ABK09853.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia HI2424] gi|124871660|gb|EAY63376.1| AP endonuclease, family 1 [Burkholderia cenocepacia PC184] gi|169817696|gb|ACA92279.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia MC0-3] Length = 257 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 84/307 (27%), Gaps = 79/307 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+++ N+N + + + +AD V +QE + + + A Sbjct: 2 MRVITANLNGIRSAAKKGFF---------------DWLGEQNADCVCVQEIKVSADDLPA 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + ++ +S + + +G S Sbjct: 47 EFVEPHGFKSYFHHAEKKGYSGAGVYSRREPDDVI--------------IGFGSSEFDPE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R VE K+ V+ +++ S + + + L + Sbjct: 93 GRY-----VEARYGKLSVVSVYVPSGSSGEERQQAKYRFMAEFMPHLAAL--------KK 139 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD N + + + + + + + D R Sbjct: 140 KREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEEREWLTKLFDDVGYVDVFRTLDQRPE 199 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + S + + SDH P Sbjct: 200 QYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKSTSI-----------FKDIKFSDHAP 248 Query: 298 ISIDYDF 304 ++IDYD+ Sbjct: 249 LTIDYDY 255 >gi|319947397|ref|ZP_08021629.1| exodeoxyribonuclease [Streptococcus australis ATCC 700641] gi|319746337|gb|EFV98598.1| exodeoxyribonuclease [Streptococcus australis ATCC 700641] Length = 275 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + R +L +ADI+ +QE Sbjct: 1 MKLISWNIDSLNA-----ALTSDSARAKLSQDVLLTLVAE-NADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S + + K + ++P +GA S R Sbjct: 55 KHLEVLEELFPGYENTWRSSVEPARKGYAGTMFLYKKELTPRVTFPEIGAP-STMDVEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +V ++ + + + L Sbjct: 114 I-----ITLEFDDFFVTQVYTPNAGDGLKRLEERQIWDAKYADYLAELDQ--------QK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F + Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDLPDQY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSAMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 VMEID 274 >gi|120556472|ref|YP_960823.1| endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8] gi|120326321|gb|ABM20636.1| Endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8] Length = 286 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 34/286 (11%), Positives = 78/286 (27%), Gaps = 56/286 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +RL+++NI + R + + D+V LQE Sbjct: 38 IRLLTFNIQVGINTSSYHHYLTRSWQHFLPNRRRYENLDRIATLLSQY--DVVALQECDG 95 Query: 77 YNAVAKVFPKNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + + + R+ + + + + + L G Sbjct: 96 GSLRSGYINQVQYLAEAAGIPYWYQQLNRNLGQIAQHSNGLLSRFRPLDVTEHKLPGL-- 153 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R A+ + ++ +HL Q + L +I Sbjct: 154 ----IPGRGAIIARYGDEEDPLVLVLMHLSLSKSA----------------QQKQL-GFI 192 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 ++ S V+ GD N + D + ++ + R + Sbjct: 193 REQIASYRHVVLMGDMNA----HAEQLLTRTPLKETDLIPL-----PDTAHSFPSWRPEK 243 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 +D+ ++ + + +SDH PI++D Sbjct: 244 ALDHILVSPSLEIRRSEVV--------------SYPVSDHLPIAMD 275 >gi|332823050|ref|XP_518271.3| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [Pan troglodytes] Length = 392 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 82/287 (28%), Gaps = 48/287 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 L++WNI+ L + + Y D++FLQE+ Sbjct: 144 FSLITWNIDGLDLNN-----------LSERARGVCSYLALYSPDVIFLQEV--------- 183 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + TAI ++K V++ Q + R Sbjct: 184 --IPPYYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPST-----KMMR 236 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V ++G ++ ++ HL+S Q + + + + Sbjct: 237 NLLCVHVNVSGNELCLMTSHLEST----------RGHAVERMNQLKMVLKKMQE-APESA 285 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKIPI 257 + AGD N + + I + + + N K+ Sbjct: 286 TVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRF 345 Query: 258 DYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D A + +I S + + G+ SDH + + D Sbjct: 346 DRIFFRAAAEEGHIIPRSLDLLGL---EKLDCGRFPSDHWGLLCNLD 389 >gi|307719602|ref|YP_003875134.1| hypothetical protein STHERM_c19260 [Spirochaeta thermophila DSM 6192] gi|306533327|gb|ADN02861.1| hypothetical protein STHERM_c19260 [Spirochaeta thermophila DSM 6192] Length = 256 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 83/306 (27%), Gaps = 80/306 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81 + + SWN+N + + L ++ + +I+ LQE + + Sbjct: 2 ISVYSWNVNGIRA---------------AAKKGLLEWIEKERPEILCLQETKARKDQLPS 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + + +++ +S + L + + Sbjct: 47 ELARPDGYHTYWAEADKPGYSGVA---------------LFTLHEPASVEPLGVDEFDRE 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + + + D + + + + C+ +K+ + Sbjct: 92 GR-----TLIADFRSFVLFDCYFPNSQEAGARLDYKLAYCN-------AVKERADAYVAA 139 Query: 202 LVPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 +I+GDFN YL ++ + + F + Sbjct: 140 GRHVLISGDFNIAHTPLDLARPEANEKNPGYLPEEREWMTYFLSSGYVDTFRMFTKEGGH 199 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDY +D+ + + + SDHCP Sbjct: 200 -YTWWTYRFKAREKDIGWRIDYHCVDERFKDKVKESVIL-----------KDVMGSDHCP 247 Query: 298 ISIDYD 303 + I D Sbjct: 248 VKITLD 253 >gi|302562602|ref|ZP_07314944.1| endonuclease/exonuclease/phosphatase [Streptomyces griseoflavus Tu4000] gi|302480220|gb|EFL43313.1| endonuclease/exonuclease/phosphatase [Streptomyces griseoflavus Tu4000] Length = 278 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 33/275 (12%), Positives = 69/275 (25%), Gaps = 49/275 (17%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA----- 79 R+++WN+ SD ++ LQE + + Sbjct: 47 RVMTWNLCN--------------PCEESDVDR-AAEIARHAPQVIALQEACARDVERIRD 91 Query: 80 -VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + + + R AV + Sbjct: 92 HLESLHGLVYHVEYGTVLRNWGRCGGAPWKPGAFGQAVLSAAPMTDRVLVEYPDGG---- 147 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + +R + + E+ G+ + V + HL + + QA L + + + Sbjct: 148 -SEDRGYMAVTTEVGGRSVRVFNTHL-----------AERRQEEVRAGQAGVLAEAVARH 195 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + ++ GDFN W+ + D R C + D Sbjct: 196 DRA----IVLGDFNAVPYAPELAR-MWELAEDADPRCRPSDA--GTCEPTTDWN--SKFD 246 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 Y + A Y++ + S Sbjct: 247 YVFLRGIAPLR---HHVEHTRYSDHHLLRTDLAPS 278 >gi|296138677|ref|YP_003645920.1| exodeoxyribonuclease III Xth [Tsukamurella paurometabola DSM 20162] gi|296026811|gb|ADG77581.1| exodeoxyribonuclease III Xth [Tsukamurella paurometabola DSM 20162] Length = 272 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 34/285 (11%), Positives = 73/285 (25%), Gaps = 60/285 (21%) Query: 47 VKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVAKVFPKNTWCIFYSTERLINHSKR 104 +R+ + +L + + AD+V LQE+ ++A + P S Sbjct: 16 KQRSEENLGML-PWLRETKADVVALQEVRATHKQSLAALAPALDEGWHLSAAE------- 67 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164 S+ +AV + + D R +E + + V ++L Sbjct: 68 -SSTAGRNGVAVLSRREPDAVRIGFGSAEFDETGRY---------LEADFGDLTVGSLYL 117 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------- 217 S ++ +++ V+ GD+N Sbjct: 118 PSGDVGTERQDEKDRFR-------AEFGEYLGTLGRRRRKAVVCGDWNIGHTELDIKNWK 170 Query: 218 ---------LGNNDDFWKTIDPNDSLIRFPKEKDSRC-NANKNLRNK---------IPID 258 I +E + ID Sbjct: 171 GNVKNSGFLPEERAWMSTYIGAGRPFTDVVRELHPGTPGPYAWWSWRGKAFDNDSGWRID 230 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + + ++ R SDH P++++Y Sbjct: 231 LQIANNALAQHATAA-------RVERAEAYSLRWSDHAPVTVEYS 268 >gi|239816655|ref|YP_002945565.1| endonuclease/exonuclease/phosphatase [Variovorax paradoxus S110] gi|239803232|gb|ACS20299.1| Endonuclease/exonuclease/phosphatase [Variovorax paradoxus S110] Length = 346 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 39/325 (12%), Positives = 95/325 (29%), Gaps = 52/325 (16%) Query: 23 KVRLVSWNINTLSEQ---EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + + + N+ L+ + + + L+AD++ +QE+ +A Sbjct: 10 TLFVATCNLLNLANPHRLYYENQDAYDEREYERKIAWTGERFHALNADVLAVQEVWDESA 69 Query: 80 VAKVFPKNTWCIFYSTER-----------LINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + ++ + + ++ + IA R + V Sbjct: 70 LKAAIARSGLRYDFVSVPGAENTPPPASPPGTPARPGAQGTPRVGIATRLQVDEVRSFVD 129 Query: 129 PLLG-----AKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFL------------ 170 G R + + + +G+++ VL +HLKS Sbjct: 130 FPPGFGVEVPGLGPHTRFERPPLLATLRMKHGQQVHVLTVHLKSKRPKFLQDAQGHALED 189 Query: 171 ----DSLENTYSPSCSLLSQQAQWLKDW-ITQKKESLVPFVIAGDFNRKINY-------L 218 S + +A L+ I + + P V+ GDFN + Sbjct: 190 REDRKVGVMASLRSLVMRGVEAAALRCIVIDLLQGTNTPLVVMGDFNDDPHSVTTQLVAA 249 Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNA---YKFL 270 + + K + + +S ++ + +D + + + Sbjct: 250 TSEVAYDKAARDVALFNAYEMQGESALKKDVAYSHIHQGFPAVLDQIFVSEEFVATSRRS 309 Query: 271 IQESFSEILYNEDDIKSRGKRLSDH 295 + + +N+ + R + SDH Sbjct: 310 LGDVRRVDYFNDHLHEGRDRSRSDH 334 >gi|326790116|ref|YP_004307937.1| endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM 5427] gi|326540880|gb|ADZ82739.1| Endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM 5427] Length = 266 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 38/298 (12%), Positives = 90/298 (30%), Gaps = 53/298 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA---- 79 +R+++ N + + + L + K D DI+ LQE+ A Sbjct: 1 MRILTLNTH-----------SWREENQEEKMSYLAEIIKERDYDIIALQEINQSTASPYL 49 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI---------AVRKKNVRVLQQSYPL 130 + ++ + + + ++ + + A+ K + + Sbjct: 50 QDRHLRRDNFMVVLQQLIEKIGGPKYNSFWDLSKVVRDEYEEGSAILCKMPITHTSCFTV 109 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 ++D R+ V++ V ++I + HL + Q Sbjct: 110 SKSRDR-DDVKARKIVKVTVTYKEQEIDLYSCHLGW----------WHDEIEPFEYQCDR 158 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 L + + S ++ GDFN N D+ D+ I ++ + Sbjct: 159 LVEEMD----SDKLSLLMGDFNNNANLREEGYDYLIDKGFYDTYILAGEKDQGVTVQGEI 214 Query: 251 LRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K ID ++++ + F+ +SDH + ++ + Sbjct: 215 AGWKGNKVGLRIDLILVNKTLTVKSSKVIFN---------GDYKNVVSDHYGVEVELE 263 >gi|218781643|ref|YP_002432961.1| exodeoxyribonuclease III Xth [Desulfatibacillum alkenivorans AK-01] gi|218763027|gb|ACL05493.1| exodeoxyribonuclease III Xth [Desulfatibacillum alkenivorans AK-01] Length = 253 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 79/306 (25%), Gaps = 80/306 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81 ++ VSWN+N + E K+ +ADI+ +QE + Sbjct: 2 LKFVSWNVNGIRAVEKKGF---------------TDMVKDFNADILAIQETRALKEQLSE 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + ++ + +S + Sbjct: 47 DLINIADYTSYWFSAEKKGYSGVSVYTKQ-------------------TPLDVMYGMDSP 87 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 A ++ + ++++++ + + L + A L Sbjct: 88 EHDAEGRVITLEYDDFYLMNVYFPNAQPKLVRLDWKLGFNQTLHKFANAL--------GE 139 Query: 202 LVPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 V+ GD+N Y + + + F + Sbjct: 140 KKSVVLCGDYNVAHKPIDLANPKQNEQNPGYSPEERAWMDEFIGSGYVDAFRMFNQEP-D 198 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDYF +D+ + + + SDHCP Sbjct: 199 NYTWWSYRFNARAKNIGWRIDYFCVDEKSKGRVKNAEILNEV-----------MGSDHCP 247 Query: 298 ISIDYD 303 +S+D++ Sbjct: 248 VSLDFE 253 >gi|159185011|ref|NP_354980.2| hypothetical protein Atu2011 [Agrobacterium tumefaciens str. C58] gi|159140285|gb|AAK87765.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 319 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 36/293 (12%), Positives = 75/293 (25%), Gaps = 59/293 (20%) Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK------KNVRV 123 LQE+ + A+ + + + + + + I A+ +R+ K V Sbjct: 25 CLQEVDNMAALQAFEYGYLYRMVGNGYLQKYLVEGNDSRGIDVAVVMREETRDGDKIEVV 84 Query: 124 LQQSYPLLGAKD-------------SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 +S+ L ++ + R +E+ + I GK + + H KS Sbjct: 85 DIKSHAALTYRNLDLFNPALAATNQIDDKIFKRDCLEIDLRIGGKPLTLYVTHFKSMTNA 144 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFNRKINY--------- 217 + + + +A ++ I + F I GD N Sbjct: 145 RDAVDARIATMPIREAEAMAVRRIIENRWGVGNTRNKNFAICGDMNDYQERVAISGDRRS 204 Query: 218 -------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQN 265 + + + R +DY + Sbjct: 205 GYSFTPVEEERSALDIFTADGFVVNPMTRRDVMDRWTLYHSRGPQEQHLCQLDYVWLSPR 264 Query: 266 AYKFLIQESFSEI---------------LYNEDDIKSRGKRLSDHCPISIDYD 303 + I + + SDHCP+ + D Sbjct: 265 LAETSATHVPEIIRNGQPFRTVFPPGQEVERYPRTGWDRPKASDHCPVVMTLD 317 >gi|21388714|dbj|BAC00811.1| DNase I [Cyprinus carpio] Length = 279 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 95/307 (30%), Gaps = 36/307 (11%) Query: 3 RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 K + A+ LV + + + ++NI + +S + ++ + Sbjct: 1 MKIITAIGLLLVSV--HLGHSLLIGAFNIKSFG---------DSKASNATLLDIITKVVH 49 Query: 63 NLDADIVFLQEMGSYN--AVAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 DIV +QE+ + A K+ N Y + +++ S R++ Sbjct: 50 RY--DIVLIQEVRDSDLTATNKLMQSVNGGSSPYEYQYIVSEPLGRSTYKERYLFIYRRQ 107 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 V V G + + NR ++ N + + Sbjct: 108 AVSVANSFQYDDGCESCGTDTFNREPFVVMFSSNTAVQQKFALVPQHTSP---------- 157 Query: 180 SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + + L D + ++ + ++ GDFN +Y+ N+D + + S Sbjct: 158 --EVAVTEIDALHDVVLDTRQRLNTNNIMLLGDFNAGCSYVSNSDWSKIRLRTDQSYTWL 215 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDH 295 + + N D V + K + S + + S+ L SDH Sbjct: 216 IPDSADTTVTHTNCPY----DRIVATSDMMKGVSAGSAQVFDFMQAHGLSQSWGLAVSDH 271 Query: 296 CPISIDY 302 P + Sbjct: 272 FPAEVQL 278 >gi|196001943|ref|XP_002110839.1| hypothetical protein TRIADDRAFT_12445 [Trichoplax adhaerens] gi|190586790|gb|EDV26843.1| hypothetical protein TRIADDRAFT_12445 [Trichoplax adhaerens] Length = 451 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 45/319 (14%), Positives = 79/319 (24%), Gaps = 48/319 (15%) Query: 22 QKVRLVSWNINTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +R+VS+NI + + R + L+ +ADI+ LQE Sbjct: 141 GDLRIVSYNILSSGYSNDVFRYCNPRYLRYSYRLPLIIDELVGYNADIICLQECD----- 195 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ--------------- 125 ++ + NH + + A+ + ++L Sbjct: 196 KELLQNVILPAMRTHGYSGNHIFKKAEVKEGLALLYNRSKFQLLSLHTFALRDLLLKDES 255 Query: 126 -----QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + A+ + + I L Sbjct: 256 LGHLAKQIKKHPQLKRKCVNLPNVAMACVFRWREAPNKLFCIGNTHLYANPMLPEVRLVQ 315 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL----------------GNNDDF 224 S++ Q + I K ++P ++ GDFN N D Sbjct: 316 ASVVLHQL----NLIRNKFTDVLPILLCGDFNSIPNSNVYQLLTTHQKHQKHFFPTTADR 371 Query: 225 WKTIDPNDSLIRFPKEKDS-RCNANKNLRNKIPIDYFVMDQNAYKFLIQESF-SEILYNE 282 WK ID N +DY ++ F +E Sbjct: 372 WKPIDLVLDNAFDFYSLCGIPQFTNYVQDFVGTLDYIFGEKEYVDVKQVVPFPTEDEIKR 431 Query: 283 DDIKSRGKRLSDHCPISID 301 D SDH + D Sbjct: 432 DKALPSPNAPSDHLALVCD 450 >gi|293115606|ref|ZP_05792271.2| exodeoxyribonuclease III [Butyrivibrio crossotus DSM 2876] gi|292809044|gb|EFF68249.1| exodeoxyribonuclease III [Butyrivibrio crossotus DSM 2876] Length = 237 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 33/269 (12%), Positives = 68/269 (25%), Gaps = 63/269 (23%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + ++DADI LQE+ + +N + + + ++ AV Sbjct: 7 DFFDSVDADIFCLQEIKLSEGQIEWNKENYYSYW-----------NYAEKKGYSGTAVFS 55 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K + + + D R ++ + + +++ ++ + + Sbjct: 56 KEKPLSVKYGIGIDEHDHEGR---------VITLEFENFYMVTVYTPNSQRELTRLEYRM 106 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------LGNNDD 223 L+ P V+ GD N Sbjct: 107 KWEDDFRNFLNDLRK--------TKPVVVTGDMNVAHKEIDLKNPKTNRKNAGFTDEERQ 158 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQES 274 + + + F IDYF+ + LI Sbjct: 159 KMTELLDSGFIDTFRYFYPDVEQKYSWWSYMFKSREKNAGWRIDYFLASKELEDRLISAE 218 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + SDHCPI + D Sbjct: 219 IHDKVL-----------GSDHCPIELVID 236 >gi|293376523|ref|ZP_06622751.1| exodeoxyribonuclease III [Turicibacter sanguinis PC909] gi|292644749|gb|EFF62831.1| exodeoxyribonuclease III [Turicibacter sanguinis PC909] Length = 251 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 31/303 (10%), Positives = 76/303 (25%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + + D + +QE Sbjct: 1 MKFISWNVNGLRACVKKGF---------------LDFVEAEQPDFLCVQETKLQEG-QID 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ + ++ A+ K+ + + D R Sbjct: 45 LQLDGYYQYWN----------YAVKKGYSGTAIFTKHEPLQVTYGLNIAEHDQEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +++ ++ + + + L Sbjct: 91 -----VITLEYNDFYLVTVYTPNSQNELARLDYRLTWEEAFRNYLIGLDVL--------K 137 Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248 P ++ GD N + + + + + F ++ N Sbjct: 138 PVIVCGDLNVAHQQIDLKNPKTNTKNAGFTIEERNEMTKLLNSGFIDTFRYFYPTKENCY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ + L ED SDHCP+ Sbjct: 198 SWWSYRAGARAKNVGWRIDYFITSKALESRL-----------EDARIYPDVLGSDHCPVG 246 Query: 300 IDY 302 + Sbjct: 247 LQL 249 >gi|239916907|ref|YP_002956465.1| putative glutamate--cysteine ligase/putative amino acid ligase [Micrococcus luteus NCTC 2665] gi|281414638|ref|ZP_06246380.1| putative glutamate--cysteine ligase/putative amino acid ligase [Micrococcus luteus NCTC 2665] gi|239838114|gb|ACS29911.1| putative glutamate--cysteine ligase/putative amino acid ligase [Micrococcus luteus NCTC 2665] Length = 902 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 88/352 (25%), Gaps = 75/352 (21%) Query: 15 PCTASVAQKVRLVSWNINTLSE----------------------QEGVSLWKNSVKRTTS 52 +V V + S+N+ + ++ + Sbjct: 488 AAPETVGGNVTVGSFNVLNYFTTLGQDVAGCSTYRDRAGTPVTTNGCLPRGAHTPEAFAR 547 Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYN---------------AVAKVFPKNTWCIFYSTER 97 + LD +V L+E+ + A+ + W S Sbjct: 548 QQEKIAAAINGLDTSVVALEEIENSEKFGLDRDHALAHLVEALNAQAGEQRWAFVASPAA 607 Query: 98 LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN-----RRAVELLVEI 152 + D I +A + V + +S L + + R A V Sbjct: 608 RPALADEDV---IRSAFIYQPAEVTPVGESVILDDQTNFDNAREPMAQLFRAADGTSVGA 664 Query: 153 NGKKIWVLDIHLKSFCFLDSLENT------YSPSCSLLSQQAQWLKDWITQKKESL--VP 204 G + + H KS + + + QA+ L + + K Sbjct: 665 AGTEFVAITNHFKSKGGSGATGDNVDTGDGQGAYNADRVGQAEALVAFAERMKAETGTDR 724 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 ++ GDFN + ++ + + + +D Sbjct: 725 VLLMGDFNSYEKEDPI-----RVLEAAGY---VSQGALTGEYSYAFGGAVGSLDGIYASP 776 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGK--------------RLSDHCPISIDY 302 +A + + I NE + R SDH PI + Sbjct: 777 SAAAAISGQDIWMINANESVALEYSRHNYVAEDLYSADQWRSSDHNPILVGL 828 >gi|70945553|ref|XP_742583.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56521649|emb|CAH81668.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 752 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 44/387 (11%), Positives = 90/387 (23%), Gaps = 98/387 (25%) Query: 16 CTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + + +++WNI E S + + T + Q N DIV LQE Sbjct: 363 NFPNTTNQFTVMTWNILAEIYGTVEAFSHCDPYMLSWSYRKTKIIQEILNHRPDIVCLQE 422 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLI---------NHSKRDSNNDIHTAIAVRKKNVRVL 124 + + + + P + + K AI KK + + Sbjct: 423 IQNEHFLEFFKPCLNQYEYQGVYKQKTKEIFTSPSGKHKGGKYTIDGCAIFYNKKKFKFV 482 Query: 125 -------QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + A+ + + + +L ++++ ++ Sbjct: 483 EIYALEFSKLIKEGSVISLPKEVQKNPALSKGLLKDNIALVLLLEYVQNNKTYEAENYEN 542 Query: 178 SPSCSLL------------------SQQAQWLKDWIT-------QKKESLVPFVIAGDFN 212 + Q Q L I QK E + +I GDFN Sbjct: 543 EKDKKKMVIVANTHIIANPEATYVKIWQTQILVKVIEYLKINFIQKYEIIPSMIICGDFN 602 Query: 213 RKINYLGN------------------------NDDFWKTIDPNDSL-------------- 234 N ++ + Sbjct: 603 STPNSAVYQLLYKKKCCRTHNDLNSDEHGLLEYLPMSHNLNLKSAYAISNFLSQTISSEE 662 Query: 235 --------IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 ++ N +DY + + + + + + Sbjct: 663 SINNIIINNTIDLDRFEPAFTNYTSNFIGCLDYIFYNDEDLNIISTVNIPDENQLIQESQ 722 Query: 287 SRGK---------RLSDHCPISIDYDF 304 R SDH P+ ++F Sbjct: 723 VYHLPTSALPSPIRSSDHFPLVAKFEF 749 >gi|169833563|ref|YP_001695212.1| exodeoxyribonuclease III [Streptococcus pneumoniae Hungary19A-6] gi|168996065|gb|ACA36677.1| exodeoxyribonuclease III [Streptococcus pneumoniae Hungary19A-6] Length = 275 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 77/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K S+P +GA S R Sbjct: 55 KHLEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDLEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +V ++ + ++ L + Sbjct: 114 I-----ITLEFDAFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAEL--------DKEK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 VLEID 274 >gi|167758256|ref|ZP_02430383.1| hypothetical protein CLOSCI_00594 [Clostridium scindens ATCC 35704] gi|167664153|gb|EDS08283.1| hypothetical protein CLOSCI_00594 [Clostridium scindens ATCC 35704] Length = 367 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 101/320 (31%), Gaps = 64/320 (20%) Query: 21 AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++++NI G + S K + + + K+ +ADI FLQ Sbjct: 65 GDAFTILTYNIGYAGLSKDEDFFMDGGSKVEPESKKLVEENLSGITSILKDQEADIYFLQ 124 Query: 73 EMGSYNAVAKVFPKNTWCIF---------------YSTERLINHSKRDSNNDIHTAIAVR 117 E+ + + + + + L K S T + V+ Sbjct: 125 EVDRDSKRSYHIDEQAYYEEELGLAGMFACNFKCDFVPYPLPPIGKVTSGLVTMTDLNVK 184 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + + L +S+ + R + +E K++ +++ HL+++ Sbjct: 185 EASRISLPESFSWPVKTCNLKRCMLEA--RVPLEGTDKELVLINFHLEAY---------- 232 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI----NYLGNNDDFW-----KTI 228 S Q++ L + + + + + GDFN+ Y +N D W Sbjct: 233 -DSGEGKIAQSKMLAEKLESEYQKGNYVIAGGDFNQTFEGMEKYPIHNKDKWVPGVVGAE 291 Query: 229 DPNDSLIRFPKEKDSRCN-------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 D + + C N + +D F++ N ++ ++ Y Sbjct: 292 DIPEGFSFAVSDNVPTCRLLDGPYSGNYDESQVYVLDGFIVSDNIKVNRVENIDTDFEYT 351 Query: 282 EDDIKSRGKRLSDHCPISID 301 DH P+ ++ Sbjct: 352 ------------DHQPVRME 359 >gi|116694965|ref|YP_729176.1| extracellular nuclease [Ralstonia eutropha H16] gi|113529464|emb|CAJ95811.1| predicted extracellular nuclease [Ralstonia eutropha H16] Length = 344 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 35/319 (10%), Positives = 80/319 (25%), Gaps = 48/319 (15%) Query: 22 QKVRLVSWNINTLSEQE---GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + + + ++N+ L+ S K K +DAD+V QE+ + Sbjct: 4 KTLSIATFNLYNLNVPGLPLYTDRNGWSEKEYERKIAWTASQLKLIDADVVGFQELWHGD 63 Query: 79 AVAKVFP----KNTWCIFYSTERLINHSKRD--SNNDIHTAIAVR-----KKNVRVLQQS 127 + + + + + A +K V + Sbjct: 64 GLLAAVEAAGLADAYDVLVPDNANGKGIVCAAIVRRGLLAGEAEWIADFPEKFVLKSKGD 123 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEI----NGKKIWVLDIHLKSFCFLDSLENTYSP---- 179 P R +R + + ++V K +D Sbjct: 124 DPQTPQISVSIRGFSRPVLHFTIRPREDEPAMHMYVCHFKSKQPTRIDGEAWYEKEIYAK 183 Query: 180 ---------SCSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWK--- 226 S + +A L+ + K + V+ GD N N + Sbjct: 184 HAKAVGAALSTIRRTAEAAALRFMLTDSMKGNNTAVVVMGDINDGQLSNTANILTEQPAY 243 Query: 227 ---TIDPNDSLIRFP-------KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 + + ++ + + +D+ ++ + Sbjct: 244 LVGDSVGGGDIALYTAQTLQEYRDTRDVYYTHVFQDFRESLDHILVSEQL---YDNSKRR 300 Query: 277 EILYNEDDIKSRGKRLSDH 295 L++ I + SDH Sbjct: 301 RWLFDGLIINNDHLNFSDH 319 >gi|322696490|gb|EFY88281.1| Endonuclease/Exonuclease/phosphatase family protein [Metarhizium acridum CQMa 102] Length = 325 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 82/293 (27%), Gaps = 26/293 (8%) Query: 20 VAQKVRLVSWNINTL-SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGS 76 VRL+S+NI +E E + R + +R ++ V LQE Sbjct: 45 ATMPVRLISFNIRYAANEDERALAEQPWDVRCPKVCSQMRFITAGHESPFVCLQESLYSQ 104 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 N + + W S + A + S Sbjct: 105 LNDIQAELGEP-WAHIGRGREEGETDGEFSPIFYRSD-AWACELSETRWLSKTPEKPSRG 162 Query: 137 FSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + A NR L NG K+ V+ H F S LL + A +W Sbjct: 163 WDAALNRIVTIGLFSHRANGTKVVVMSTH-----FDHIGVEARKNSAKLLIKFA---NEW 214 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-ANKNLRN 253 K +I GDFN + + +D P+ + + Sbjct: 215 SHGKGVPPSVVLIGGDFNSEPDDEAYQMMTAPGSGMSDISGLVPERGHYGNHLTYTSFGE 274 Query: 254 K----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ + + + +++ R SDH PI D Sbjct: 275 PNEHPQRIDFLFIQEPRTAQVETFGVLANSFDDQI------RFSDHRPIVSDL 321 >gi|212633735|ref|YP_002310260.1| endonuclease/exonuclease/phosphatase [Shewanella piezotolerans WP3] gi|212555219|gb|ACJ27673.1| Endonuclease/exonuclease/phosphatase [Shewanella piezotolerans WP3] Length = 361 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 45/346 (13%), Positives = 95/346 (27%), Gaps = 67/346 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +V++ S+N+ E S ++ L + DI+ QE+ S +A Sbjct: 13 QVKVASFNLFNYIEPPLAYYDFENIYSGEQWAKKQLWLANFLAENQPDIIGFQEVFSADA 72 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD---S 136 +A + ++ D AIA + V AK Sbjct: 73 LANQAREAGLE-HFAVVDEPTIVDDFICRDPVVAIASKFAFEDVQAVDVDSDYAKALGLE 131 Query: 137 FSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYS----------------- 178 S +R+ + + V + + +HLKS Sbjct: 132 ESFKYSRKPLRVTVVLPDIGHCDIYVVHLKSKRASLDELPPAQSMTVKHSGKANFGELLG 191 Query: 179 -------PSCSLLSQQAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTID- 229 S +A L + ++ E+ ++ GDFN +++ + + + Sbjct: 192 RNVLGQWASGIQRGTEAALLFHTMMLRRIETQNAMILLGDFNDSLSHQPLSLLLAQELRF 251 Query: 230 ---------------------------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 +++ R + +DY ++ Sbjct: 252 EREGSGELASYPLSDSYQLYYQREAEVNAENISDENSMPSQRQATHYYGAQGNVLDYILL 311 Query: 263 DQNAYKFLIQESFSEILYNEDDIK------SRGKRLSDHCPISIDY 302 Q+ + Y+ +D +R +DH P+ Sbjct: 312 SQDFNPHFHTSTAEVTDYHTEDRHLINPQYARDSHSTDHAPVLCTI 357 >gi|161526271|ref|YP_001581283.1| exodeoxyribonuclease III Xth [Burkholderia multivorans ATCC 17616] gi|189349015|ref|YP_001944643.1| exodeoxyribonuclease III [Burkholderia multivorans ATCC 17616] gi|221214692|ref|ZP_03587662.1| exodeoxyribonuclease III [Burkholderia multivorans CGD1] gi|160343700|gb|ABX16786.1| exodeoxyribonuclease III Xth [Burkholderia multivorans ATCC 17616] gi|189333037|dbj|BAG42107.1| exodeoxyribonuclease III [Burkholderia multivorans ATCC 17616] gi|221165582|gb|EED98058.1| exodeoxyribonuclease III [Burkholderia multivorans CGD1] Length = 256 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 84/305 (27%), Gaps = 75/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++ N+N + + + +AD V +QE+ KV Sbjct: 2 MRVITANLNGIRSAAKKGFF---------------DWLGEQNADCVCVQEI-------KV 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + F + L ++ + A ++ ++G S R Sbjct: 40 SADDLPAEFVAPHGLKSYFHHAAKKGYSGAGLYSRREP-----DDVIIGFGSSEFDPEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 VE K+ V+ +++ S D + L + Sbjct: 95 Y-----VEARYGKLSVVSVYVPSGSSGDERQQAKYRFMDEFMPHLAEL--------KKTR 141 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N + + + + + + + D R Sbjct: 142 EVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLSKLFDDVGYVDVFRTLDPRPEQY 201 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY + S + + SDH P++ Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPGVASTAKSTSI-----------FKDIKFSDHAPLT 250 Query: 300 IDYDF 304 +DYD+ Sbjct: 251 VDYDY 255 >gi|47220750|emb|CAG11819.1| unnamed protein product [Tetraodon nigroviridis] Length = 451 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 42/299 (14%), Positives = 78/299 (26%), Gaps = 46/299 (15%) Query: 23 KVRLVSWN---INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 VR+ S N I LS+ Y ++ DIV LQE+ S Sbjct: 3 SVRVFSLNCWGIRYLSKH------------VRQRYAMIGDMLSKEKHDIVLLQEVWSEKD 50 Query: 80 ----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 K+ + ++ + + + S + I A R Sbjct: 51 YLFLKQKLSSCHPHSHYFKSGVIGSGLALFSKHRIQDAFLYRYSL-------NGYPYMAH 103 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 G + ++ I V HL + P QA L+ ++ Sbjct: 104 HGDWFGGKAVGLAVLNIGSLTANVYVTHLHA-----EYCRDRDPYLPHRVVQAWELQQFV 158 Query: 196 TQKKESLVPFVIAGDFNRKI---------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC- 245 ++ GD N G D + +T + ++ Sbjct: 159 RHTSAGADVVILGGDLNMHPQDLGCRLLRTSTGLRDSYLETSKFDGCENGVTLIPENPFI 218 Query: 246 --NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 I IDY + ++ + + + + SDH ++ Sbjct: 219 CEKELGPFDKGIRIDYIMFKGSSKASICCDFMCTTKGSVSNQP---FPYSDHEAVTAHL 274 >gi|332228872|ref|XP_003263614.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [Nomascus leucogenys] Length = 392 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 83/287 (28%), Gaps = 48/287 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++WNI+ L + + Y D+VFLQE+ Sbjct: 144 FSFITWNIDGLDLNN-----------LSERARGVCSYLALYSPDVVFLQEV--------- 183 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + TAI ++K V++ Q + R Sbjct: 184 --IPPYYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPST-----KMMR 236 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V ++G ++ ++ HL+S + Q + + + + Sbjct: 237 NLLCVHVNVSGNELCLMTSHLEST----------RGHAAERMNQLKMVLKKMQE-APESA 285 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKIPI 257 + AGD N + + I + + + N K+ Sbjct: 286 TVIFAGDTNLRDQEVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRF 345 Query: 258 DYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D A + +I +S + + G+ SDH + + D Sbjct: 346 DRIFFRAAAEEGHIIPQSLDLLGL---EKLDCGRFPSDHWGLLCNLD 389 >gi|171915191|ref|ZP_02930661.1| Endonuclease/exonuclease/phosphatase [Verrucomicrobium spinosum DSM 4136] Length = 331 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 32/256 (12%), Positives = 80/256 (31%), Gaps = 43/256 (16%) Query: 49 RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108 R ++ L ++ D+V LQE+ A K+ + + Sbjct: 111 RRNQNHAALETLLRDRQPDVVVLQEVSPGWAEMLPRLKDLYPHQWLEYHRKGSW------ 164 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 +A+ + ++ +G + + + G+ + +L++H Sbjct: 165 ----GLAILSR------GAWEKVGLHKLGESGPKKLGMVAEFDFKGQPVSLLNVHAPHPT 214 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 + + + ++ W Q+++ ++AGDFN +K Sbjct: 215 SAAEIAD--------RHVMHEEIRLWSVQRQQEGRAVIVAGDFNCTP-----WAWLYKDF 261 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 L+ + + + L ++I ID+ + + + + Sbjct: 262 LYQTHLVDTSQGRLFEATRHVWLPDRIMIDHVFVSSD--------------WKVSGREVG 307 Query: 289 GKRLSDHCPISIDYDF 304 SDH P+ + D+ Sbjct: 308 PDFGSDHRPVFVSLDW 323 >gi|162147600|ref|YP_001602061.1| exodeoxyribonuclease III protein [Gluconacetobacter diazotrophicus PAl 5] gi|209542233|ref|YP_002274462.1| exodeoxyribonuclease III Xth [Gluconacetobacter diazotrophicus PAl 5] gi|161786177|emb|CAP55759.1| putative exodeoxyribonuclease III protein [Gluconacetobacter diazotrophicus PAl 5] gi|209529910|gb|ACI49847.1| exodeoxyribonuclease III Xth [Gluconacetobacter diazotrophicus PAl 5] Length = 270 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 38/307 (12%), Positives = 83/307 (27%), Gaps = 67/307 (21%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +R+V+WNIN+L + + L DI+ LQE Sbjct: 5 ATHMRIVTWNINSLRLRLPLLARLG----------------AELRPDIICLQE---TKVP 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +FP + + L + + +A+ + PL D +R+ Sbjct: 46 DDLFPAD------AIRDLGYVHIQHRGMKSYNGVAILSRVPLT-----PLDDTPDWCARS 94 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + + G+ + + + ++ + D + +P + W T + Sbjct: 95 DCRH-IAASFPMGGRPVELHNFYVPAG--GDIPDPDANPKFAHKLAFVDEATSWFTGRTS 151 Query: 201 SLVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ GD N ++ + Sbjct: 152 HRT--ILVGDLNIAPLEQDVWSHKQLLNVVSHTPPEVTRLMAWQACGFVDAMRHFVPPDE 209 Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ + + L + SDH Sbjct: 210 KLYTWWSYRNRDWKASNRGRRLDHVWITPDLTAALKDMTV-------LREARDWPTTSDH 262 Query: 296 CPISIDY 302 P+++D+ Sbjct: 263 VPVAMDF 269 >gi|260061515|ref|YP_003194595.1| exodeoxyribonuclease [Robiginitalea biformata HTCC2501] gi|88785647|gb|EAR16816.1| exodeoxyribonuclease [Robiginitalea biformata HTCC2501] Length = 269 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 83/305 (27%), Gaps = 73/305 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++++ S+N+N + + + D++ LQE Sbjct: 12 NRLKIASYNVNGIRA---------------AIRKGFLDWLVLAGPDVICLQE-------T 49 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K + + H + ++ +A+ + + + G + A Sbjct: 50 KAMKEQLDLEAFEKAGYPYHYWFSAEKKGYSGVAILSR----QRPDHVAYGTGIGYMDAE 105 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + + ++ ++L S Q + ++ K Sbjct: 106 GRN-----IRADFGGVSIMSLYLPSGT--------NIARLDHKLQYMADFQAYVDSLKRE 152 Query: 202 LVPFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNA 247 + VI GD+N + +D W + I + + + Sbjct: 153 IPELVICGDYNICHRPIDIHDPVRNKNVSGFLPVEREWIGNFIDSGFIDSFRHFNPDPHH 212 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +DY ++ + L + R SDHCPI Sbjct: 213 YTWWTYRAGARAKNKGWRLDYGMVSRPLEDRLARSVIL-----------PEARHSDHCPI 261 Query: 299 SIDYD 303 ++ Sbjct: 262 MLELS 266 >gi|301760096|ref|XP_002915856.1| PREDICTED: 5'-tyrosyl-DNA phosphodiesterase-like, partial [Ailuropoda melanoleuca] Length = 366 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 84/288 (29%), Gaps = 50/288 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++WN++ L + Y + D++FLQE+ Sbjct: 118 FSFITWNVDGLDLNN-----------LQERARGVCSYLTLYNPDVIFLQEV--------- 157 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 +C + TAI ++K V+ Q R Sbjct: 158 --IPPYCSYLKKRASSYEIITGHEEGYFTAIMLKKSRVKFKSQEIIPFPNT-----KMMR 210 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++G ++ ++ HL+S Q + + + + Sbjct: 211 NLLCVYASVSGNELCLMTSHLEST----------RGHAKERMNQFKTVLKKMQE-APESA 259 Query: 204 PFVIAGDFNRKINY-------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + AGD N + + N D W+ + ++ + CN K+ Sbjct: 260 TVIFAGDTNLRDHEVTKCGGLPSNILDVWEFL-GKPKHCQYTWDTQMNCNLGIAPACKLR 318 Query: 257 IDYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D A ++ +S + + G+ SDH + + D Sbjct: 319 FDRIFFRTAAESGHIVPQSLELLGL---EKLDCGRFPSDHWGLLCNLD 363 >gi|291222020|ref|XP_002731016.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii] Length = 338 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 37/324 (11%), Positives = 78/324 (24%), Gaps = 80/324 (24%) Query: 4 KYVLALVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 K L + F + + ++ ++LVSWN+N + +Y Sbjct: 64 KPTLDSLDFSLNAKTTDGKEWNIKLVSWNVNGVRAWCKNEG---------------HKYV 108 Query: 62 KNLDADIVFLQEMGSYNA-VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 D DI +QE V + + ++S ++ K Sbjct: 109 SKEDPDIFTIQETKCQEGEVPDDVKFDGYHSYWSYAEEKGYAGTGLY----------SKV 158 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + + D R + +K + + ++ + + Sbjct: 159 EPISVTYGIGINKHDKEGR---------CITAEYEKFYFISTYIPNAGKGLKRLSYRQEW 209 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------LGNNDDFW 225 + + L + P + GD N + + Sbjct: 210 DKDFREYMKKL--------DEKKPIIWCGDLNVAHQEIDLTNPKTNKKTAGFSKEEREGF 261 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFS 276 + + + +DYFV+ + L Sbjct: 262 TKHLEIGLVDSYRHLNPEKTGEWSFWTYMMNARGKNIGWRLDYFVLSKRLLPCLCDSIIR 321 Query: 277 EILYNEDDIKSRGKRLSDHCPISI 300 +Y SDH PI + Sbjct: 322 SQVY-----------GSDHAPIVL 334 >gi|281352756|gb|EFB28340.1| hypothetical protein PANDA_003873 [Ailuropoda melanoleuca] Length = 353 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 84/288 (29%), Gaps = 50/288 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++WN++ L + Y + D++FLQE+ Sbjct: 105 FSFITWNVDGLDLNN-----------LQERARGVCSYLTLYNPDVIFLQEV--------- 144 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 +C + TAI ++K V+ Q R Sbjct: 145 --IPPYCSYLKKRASSYEIITGHEEGYFTAIMLKKSRVKFKSQEIIPFPNT-----KMMR 197 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + ++G ++ ++ HL+S Q + + + + Sbjct: 198 NLLCVYASVSGNELCLMTSHLEST----------RGHAKERMNQFKTVLKKMQE-APESA 246 Query: 204 PFVIAGDFNRKINY-------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + AGD N + + N D W+ + ++ + CN K+ Sbjct: 247 TVIFAGDTNLRDHEVTKCGGLPSNILDVWEFL-GKPKHCQYTWDTQMNCNLGIAPACKLR 305 Query: 257 IDYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D A ++ +S + + G+ SDH + + D Sbjct: 306 FDRIFFRTAAESGHIVPQSLELLGL---EKLDCGRFPSDHWGLLCNLD 350 >gi|253569392|ref|ZP_04846802.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251841411|gb|EES69492.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 361 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 85/302 (28%), Gaps = 67/302 (22%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++ +S+N+ + E + Y + +ADI+ LQE S Sbjct: 99 GSIKFLSYNVMGFNNLEKKEGKNP-----------ILSYLADSEADIICLQEYNSTKNKK 147 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + ++ + H + + +A K + + + + Sbjct: 148 YLTDEDIRKALKAYPYRSIH----NPEKGGSQLACFSKFPILSARPIKYESTYNGSMQY- 202 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSL-----------------------ENTYS 178 +++N I +++ HL+S + Sbjct: 203 -------TLKVNEDTITLINNHLESNKLTKEDKVIYEDMIKDPNAKKVKTGLRQLIKKLA 255 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + ++ S QA + I K + GDFN + + + +D F Sbjct: 256 EASAIRSSQADSVAVAIANSKYPT--IIACGDFNDA-SISYTHRILTQQLDD-----AFT 307 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + ID ++ N + + + + SDH PI Sbjct: 308 QSGRGLGISYNLNKFYFRIDNILISPN--QKAYNCTVDRSIKD-----------SDHYPI 354 Query: 299 SI 300 Sbjct: 355 WC 356 >gi|332665289|ref|YP_004448077.1| endonuclease/exonuclease/phosphatase [Haliscomenobacter hydrossis DSM 1100] gi|332334103|gb|AEE51204.1| Endonuclease/exonuclease/phosphatase [Haliscomenobacter hydrossis DSM 1100] Length = 347 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 80/303 (26%), Gaps = 70/303 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++L+++N+ + L + L D++ +QE + Sbjct: 92 APNIKLMTFNVYGFDDFHQRGLP--------AAANELESLVYLHQPDVLCMQEF-----L 138 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + + HS + +A+ + + + Sbjct: 139 YDKQRGPAYLKALTQHNGLTHSVWKPAEE----LAIFSRYPILRSEVRYFGSTNGYR--- 191 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKS---------------------FCFLDSLENTYSP 179 +++ + I V ++HL+S + + S+ + Sbjct: 192 ------FADLQVGEQIIRVYNVHLRSNSITGLTNKVVDSGDLREKETWSSVGSILRNFKR 245 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + + Q + L + S P ++ GDFN + K D Sbjct: 246 AAQGRASQVEELMAHL---ANSPYPVLVCGDFNDIPQSYTYHRIRKKL----DDAFLSSG 298 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 A + IDY DQ + + SDH P+ Sbjct: 299 SGIGITYAGRIPGL--RIDYIFTDQR--------------FTPVYCERGKVSFSDHRPVI 342 Query: 300 IDY 302 Sbjct: 343 AVI 345 >gi|282880174|ref|ZP_06288894.1| endonuclease/exonuclease/phosphatase family protein [Prevotella timonensis CRIS 5C-B1] gi|281306047|gb|EFA98087.1| endonuclease/exonuclease/phosphatase family protein [Prevotella timonensis CRIS 5C-B1] Length = 267 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 41/299 (13%), Positives = 85/299 (28%), Gaps = 74/299 (24%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + V+++++N+ + + K AD + L E+ + ++ Sbjct: 18 AQETVKVITFNVRSFEPDFDTKPY--------------ADLLKGEQADFICLNEVENRSS 63 Query: 80 VAK------------VFPKNTWCIFYSTERLINHSKRDSNNDIH------TAIAVRKKNV 121 + + + F + L N + A+ + Sbjct: 64 RQQKNGKFRDVVQELALNLHMFGTFGYSYNLSNKQGEYPEANYKYCMNELYGNAILSRYP 123 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPS 180 + S L K S A R + V + GK I ++ HL Sbjct: 124 IMNVISKQLPRPKGS---ADQRSVIAADVLLPSGKTIRIISTHLDHIGG----------- 169 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 +QA+ + + S +P ++ GD N+ + N + ++ Sbjct: 170 ---QLEQAKVITS--DEITSSTLPTILTGDMNQGVGSSVINQYLTRYERMDND------- 217 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N ID+ + ++ + K LSDHCP+ Sbjct: 218 -------NGTYMGMSKIDFIFGSKG--------QWNLQSCKVLERFLNQKELSDHCPVL 261 >gi|332881400|ref|ZP_08449050.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680776|gb|EGJ53723.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 362 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 32/293 (10%), Positives = 77/293 (26%), Gaps = 53/293 (18%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++L+++N L+ E + + + Y +ADI+ LQE + + Sbjct: 98 DALKLLTYNTEFLARGEKNAEGRYP----------ILDYLAASEADIICLQEGVAPKNLK 147 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 S + R ++ V + + + Sbjct: 148 S-------EYVDSIMAKAGYHIRRLHDGKAEPQFVYSRLPILSVHRIAYESTTNGSLAVE 200 Query: 142 NRRAVELLVEING---------------KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 + ++ +N K+I + + L + + L Sbjct: 201 LLYGQDTVLLVNNHLESYKLTPEDKMKYKEIIKDPENGHAESNSRELVRKMAGASRLRGP 260 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 Q + +++ K ++ GD N + + F + + Sbjct: 261 QVDSVLNYVE--KSGRRAVIVCGDLNDSPISYSCHRLSSRLKSA------FRQSGNGLGL 312 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ + + + D + SDH P+ Sbjct: 313 SYNQKGFYFRIDHIFVSD----------YWQTYETHVDKTAPW---SDHYPMI 352 >gi|325962565|ref|YP_004240471.1| exodeoxyribonuclease III [Arthrobacter phenanthrenivorans Sphe3] gi|323468652|gb|ADX72337.1| exodeoxyribonuclease III [Arthrobacter phenanthrenivorans Sphe3] Length = 273 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 36/307 (11%), Positives = 78/307 (25%), Gaps = 65/307 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +R+ S N+N L + + + + DI+ LQE+ + +A+ Sbjct: 4 DHLRIASVNVNGLRAAFKNG---------------MAAWLEPREVDILCLQEVRAPDAIV 48 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + W I +S +A+ + + + + R Sbjct: 49 RQLLGDGWHILHSEAEAKG----------RAGVAIASREEPLATRDGIGDDYFATAGRWV 98 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 ++ V ++ S ++ +++ + L + Sbjct: 99 EADFRLTDSAGERVQLTVASAYVHSGEVGTPKQDDKFRFLDVMTTRLPEL-------SKH 151 Query: 202 LVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ GD N + F + + + Sbjct: 152 SDHALVVGDLNVAHTPLDIRNSKGNVKKAGHLPEERAYFDRFFGEEIGWHDVHRNLAGQV 211 Query: 246 -NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + IDY + I D S R SDH Sbjct: 212 DGPYTWWSQRGKAFDNDTGWRIDYHLATPALAASAISA-------VVDRAPSWDTRFSDH 264 Query: 296 CPISIDY 302 P+ +DY Sbjct: 265 APLVVDY 271 >gi|228469461|ref|ZP_04054469.1| AP endonuclease domain protein [Porphyromonas uenonis 60-3] gi|228309036|gb|EEK17679.1| AP endonuclease domain protein [Porphyromonas uenonis 60-3] Length = 392 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 89/297 (29%), Gaps = 60/297 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS N N K D Y DADI+ LQE + +K Sbjct: 131 IKVVSLNANAF----------QFTKLGAHDQHATTDYLAKSDADIICLQEAWLSSNKSKY 180 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + S + + ++ + V K + + L + Sbjct: 181 MSERSLRHTLSNYPYYSSAYAVKDHGSR--LIVLSKYPILSTRPIDLHSKFN-------- 230 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLE--------------------NTYSPSCSL 183 + + KK+ + ++HL+SF F + +SP+ Sbjct: 231 GGAVFTILVGEKKLVLYNLHLESFGFTREEQAHYFQLAQEVNPKGFTQAVGGRFSPAFKR 290 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 +QQ + + I ++ ++ GDFN ++ + + + Sbjct: 291 RAQQVEQIYQDINYQESP--YLLVCGDFNDTPISYTHHR-----LSAGLHDAIATTGRGT 343 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + ID+ + ++ + R +SDH PI Sbjct: 344 NYSYYFKSLIGVRIDHMLYS----DQIVARAAHV---------DRSVNISDHKPIIC 387 >gi|220933300|ref|YP_002512199.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. HL-EbGR7] gi|219994610|gb|ACL71212.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. HL-EbGR7] Length = 261 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 40/271 (14%), Positives = 79/271 (29%), Gaps = 63/271 (23%) Query: 59 QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + K DAD+V +QE + + F + +Y +S A+ Sbjct: 21 DWLKQQDADVVCIQETKAQEHQLGDETFWPQGYFTYYHDAEKKGYSG--------VALFC 72 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 R + + G R +E K+ V+ ++L S + + Sbjct: 73 RSEP------DRIITGLGSEEFDQEGRY-----IEAQFGKLSVISLYLPSGSSSEERQAA 121 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN---------------YLGNN 221 L + L+ +++ GD+N +L Sbjct: 122 KFRFMDLFLDHMRALRR-------KRREYIVCGDWNIAHKPIDLKNWKSNQKNSGFLPEE 174 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQ 272 + T+ + + ++ + N+ +DY V+ + Sbjct: 175 RAWLDTLFDELGWVDAFRVVNTEPDQYTWWSNRGQAWAKNVGWRLDYQVVSPGLRDKIRS 234 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 S +R SDH P+S+DYD Sbjct: 235 ASI-----------YTEQRFSDHAPLSMDYD 254 >gi|162312263|ref|NP_596144.2| inositol phosphosphingolipid phospholipase C (predicted) [Schizosaccharomyces pombe 972h-] gi|20138888|sp|O74369|NSMA_SCHPO RecName: Full=Putative neutral sphingomyelinase gi|157310440|emb|CAB39367.2| inositol phosphosphingolipid phospholipase C (predicted) [Schizosaccharomyces pombe] Length = 424 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 46/319 (14%), Positives = 89/319 (27%), Gaps = 63/319 (19%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++R++S+N L + K T + + D DIV LQE+ S Sbjct: 6 APELRVLSFNCWGL---------RFVSKYRTERLKAVGEKLAKCDYDIVLLQEVWSIYDF 56 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ--SYPLLGAKDSFS 138 ++ + + YS +A+ K + YPL G +F Sbjct: 57 QEIRNLVSCNLVYSRFFHSAAMGA--------GLAMFSKFPIIESSMNKYPLNGRPQAFW 108 Query: 139 RAGN---RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R + ++ G+ I + + HL + + QA ++ Sbjct: 109 RGDWYVGKGVATASLQHPSGRIISLFNTHLHAPYGKGADTY-----LCHRLSQAWYISKL 163 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK--------------- 239 + + + AGDFN + + + + + L +P Sbjct: 164 LRAAVQRGHIVIAAGDFNIQPLSVPHEIITSYGLVNDAWLSVYPDQVEHPPNRFSMNDKE 223 Query: 240 -----EKDSRCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDD 284 N N +DY + ++ + + Sbjct: 224 LVEIAGTTCDSRLNTWRENISSKDMDDFVAKRLDYVFHSPS---TCEAKNAKVVFL--ER 278 Query: 285 IKSRGKRLSDHCPISIDYD 303 + SDH I Sbjct: 279 VPKLDCSYSDHFAIETVLS 297 >gi|71018093|ref|XP_759277.1| hypothetical protein UM03130.1 [Ustilago maydis 521] gi|74702006|sp|Q4P9T3|CCR4_USTMA RecName: Full=Glucose-repressible alcohol dehydrogenase transcriptional effector; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase gi|46099127|gb|EAK84360.1| hypothetical protein UM03130.1 [Ustilago maydis 521] Length = 670 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 39/345 (11%), Positives = 96/345 (27%), Gaps = 64/345 (18%) Query: 19 SVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + ++S+NI + + + + Q + ADI LQE+G Sbjct: 299 ATQESFNVLSYNILFDRYATAQMYGYTPSWALAWDYRKEFILQEVMSYSADICCLQEVGV 358 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH----TAIAVRKKNVRVLQQSY---- 128 + + + ++ +++ AI + +++++ Sbjct: 359 EQYEDYFLHHLSQQDYEGVFYPKSRARTMRDDERRRVDGCAIFYKSNKYQLIEKQLVEFN 418 Query: 129 -------PLLGAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTY 177 ++D ++R + + ++ +++G +I V ++H + + Sbjct: 419 QIALQRPDFKKSEDMYNRVMTKDNIAVIALLENKLSGSRIVVANVHTHW---DPAFRDVK 475 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLV-----------------PFVIAGDFNRKINYLGN 220 ++L + + + P +I GDFN G Sbjct: 476 LVQVAMLMDEVEKAGARFAKLPPKPSVAEGYPPPPKYTHANQIPTIICGDFNSVP-ETGV 534 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRC---------------------NANKNLRNKIPIDY 259 D P D + N + IDY Sbjct: 535 YDFLANGAVPGDHEDFMDHVYGNYTAQGLQHSYKLESSYVPIGELPFTNYTPGYEGAIDY 594 Query: 260 FVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +N + + ++ SDH I +++ Sbjct: 595 IFYTKNTLSVTGVLGEIDKQYLSKVVGFPNAHFPSDHICIMSEFN 639 >gi|297561147|ref|YP_003680121.1| exodeoxyribonuclease III Xth [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296845595|gb|ADH67615.1| exodeoxyribonuclease III Xth [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 267 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 36/306 (11%), Positives = 68/306 (22%), Gaps = 69/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 + + S N+N L + DAD+V LQE + A Sbjct: 1 MTVSSVNVNGLRAAAKKDPGF-------------VGWLAGTDADVVCLQETRAEAEQLPA 47 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 V W + + + + P Sbjct: 48 GVVAPEGWHVVLAPAAARGRAGVAVY-----------------SRREPDEVRVGFGHAEF 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + V++ G + V ++L S + L + +E Sbjct: 91 EDAGRYVEVDLGG--VTVASLYLPSGEVGTERQEEKERFMEAFLPY---LVKRRAEVEER 145 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 V+ GD+N + + +D + + Sbjct: 146 GRELVVCGDWNIAHAEVDLKNWRANRKNAGFLPEEREWLSRVLDEAGFVDVVRSLHPDQE 205 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + ID V + + R SDH Sbjct: 206 GPYTWWSYRGRAFDNDAGWRIDLQVATPGLAGCAVDA-------RVERASEHAGRWSDHA 258 Query: 297 PISIDY 302 P+++ Y Sbjct: 259 PVTVRY 264 >gi|282879782|ref|ZP_06288512.1| endonuclease/exonuclease/phosphatase family protein [Prevotella timonensis CRIS 5C-B1] gi|281306451|gb|EFA98481.1| endonuclease/exonuclease/phosphatase family protein [Prevotella timonensis CRIS 5C-B1] Length = 348 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 32/324 (9%), Positives = 82/324 (25%), Gaps = 60/324 (18%) Query: 26 LVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLDADI------ 68 + +N L + + + T+ + + ++ D+ Sbjct: 29 VGFYNQENLFDTCHDKGKNDYDFLPTGSYKWDKLKYTNKLRNMARALADMGTDVLPKVGC 88 Query: 69 --VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-VLQ 125 + L E+ + + + + + H + I A+ + Sbjct: 89 AMIGLSEVENARVLDALVAQPP---LAARGYRYIHVEGPDRRGIDCALLYNPQLFTPQTV 145 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 + P + S R + + + G+ + V+ H S + + Sbjct: 146 KLVPYVPQLPKDSAFHTRGYLTVTGTLGGEHVAVIVCHWPSRYSGSYYR-------EVAA 198 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID------PNDSLIRFPK 239 Q + +KD + ++ + + ++ GD N + + + Sbjct: 199 AQVKAVKDSLLRQYPA-IKVMVMGDMNDDPTNRSMAKVLSAKAEVDEVGKDDMYNPWYNI 257 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK--------- 290 D V+ N + +S + Y + I Sbjct: 258 LAKQGRGTLMYQGGWNLFDQIVLSPNMLNQNGKRDYSSLKYWKCQIVRYDYLIQSTGKYK 317 Query: 291 --------------RLSDHCPISI 300 SDH P+ + Sbjct: 318 GAPKRTTAGGVWLNGYSDHLPVVV 341 >gi|307710716|ref|ZP_07647145.1| exodeoxyribonuclease III [Streptococcus mitis SK321] gi|307617487|gb|EFN96658.1| exodeoxyribonuclease III [Streptococcus mitis SK321] Length = 275 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 78/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K ++P +GA S R Sbjct: 55 KHLEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAP-STMDLEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + K +V ++ + ++ L + Sbjct: 114 I-----ITLEFDKFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAEL--------DKEK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADNVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 VMEIE 274 >gi|270293121|ref|ZP_06199332.1| exodeoxyribonuclease [Streptococcus sp. M143] gi|270279100|gb|EFA24946.1| exodeoxyribonuclease [Streptococcus sp. M143] Length = 275 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 78/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSTRAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K ++P +GA S R Sbjct: 55 KHLEILAELFPNYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAP-STMDLEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +V ++ + ++ L + Sbjct: 114 I-----ITLEFDEFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAEL--------DKEK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 VMEIE 274 >gi|294657145|ref|XP_459462.2| DEHA2E03124p [Debaryomyces hansenii CBS767] gi|199432478|emb|CAG87678.2| DEHA2E03124p [Debaryomyces hansenii] Length = 362 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 83/308 (26%), Gaps = 41/308 (13%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+RL + NI + V+ K KR + + + A++V LQE+ Sbjct: 63 KIRLYTHNIRFDNHHTDVNEEK-WSKRRQLVTSSIDFNTDSGSANVVCLQEVLHNQLEDI 121 Query: 83 VFPK------NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 ++ + W F + A N P + Sbjct: 122 LYNLNEGNTTDDWTYFGVGRTDGKTEGEYAPILFKRAEWNVVDNSTSWLSESPEVP-SRG 180 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + A R + +E L+ F + S L+ + + Sbjct: 181 WDAALERIVSMVTLESKANPFVRLNFFNTH--FDHKGKKARRESARLIVDRME------- 231 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL--IRFPKEKDSRCNANKN-LRN 253 + P + GDFN K + +L + N + Sbjct: 232 --NYNGYPSFLCGDFNTKPEDEPYQILKSHGFKDSRTLIDQLHSYGHKATFTGFDNLHED 289 Query: 254 KIPIDYF----VMDQNAYKFLIQESFSEILYNEDDIKSR---------------GKRLSD 294 IDY I ES Y+ D + G +SD Sbjct: 290 TAIIDYVWGPYFAKNGNQSPSILESEDINYYDLDLHEEYKVMIKQYAVLHSRFHGFYMSD 349 Query: 295 HCPISIDY 302 H P+S DY Sbjct: 350 HRPVSADY 357 >gi|70730243|ref|YP_259982.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens Pf-5] gi|68344542|gb|AAY92148.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens Pf-5] Length = 268 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 38/293 (12%), Positives = 81/293 (27%), Gaps = 52/293 (17%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM- 74 Q++R+++ N + LR+ ++ AD+VFLQE+ Sbjct: 9 PNPEAVQRLRVLTVNTHKGFTALNRRF----------ILPELREAVRSTQADLVFLQEVL 58 Query: 75 -GSYNAVAKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 +++ + S + + D H A+ K ++ Sbjct: 59 GEHERHASRLDNWPQQSQYEFLADSMWSDYAYGRNAVYPDGHHGNALLSKFPIRQYRNLD 118 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + R + ++++ G ++ + +HL L+ Sbjct: 119 VSITG-----PERRGLLHCVLDVPGHAEVHAICVHLSLLESHRQLQLALLGQLL------ 167 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + P +IAGDFN + ND F + Sbjct: 168 --------ESLPEEAPVIIAGDFNDWQMHGN-----ATLGRRNDLHEAFERHHGRPAKTY 214 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + +D + + LSDH P++++ Sbjct: 215 PARWPLLRLDRVYLRNAHSHR-----------PQILGNKPWTHLSDHLPLAVE 256 >gi|110639863|ref|YP_680073.1| exodeoxyribonuclease III [Cytophaga hutchinsonii ATCC 33406] gi|110282544|gb|ABG60730.1| exodeoxyribonuclease III [Cytophaga hutchinsonii ATCC 33406] Length = 254 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 33/306 (10%), Positives = 90/306 (29%), Gaps = 81/306 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81 ++++++N+N + + L + K +AD++ QE+ + Sbjct: 1 MKIITYNVNGIRA---------------AITKGLLTWVKATNADVLCFQEIKASVDQFDV 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F + + + + + +A+ K + V + + D R Sbjct: 46 ESFKALGYTTYAFPAQKKGY----------SGVAICTKEIPVHVEYGCGIEKYDFEGR-- 93 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 ++ + V+++++ S D + + +I++ ++ Sbjct: 94 -------VIRADYPTFSVMNVYMPSGSSGDDRQ-------AFKFGWMDDFLLYISEVRKK 139 Query: 202 LVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + ++ GD+N + K D + + + Sbjct: 140 IPNLIVCGDYNICHKAIDIHNPKSNAKTSGFLPEEREWMSKFFDSG--FVDAFRHFNEEP 197 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + IDY + Q L + + SDHC Sbjct: 198 HHYTWWSYRAGSRGKNLGWRIDYHSVTQEMVGKLKRSVILPDAIH-----------SDHC 246 Query: 297 PISIDY 302 P+ ++ Sbjct: 247 PVLLEI 252 >gi|94987973|ref|YP_596074.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS9429] gi|94991856|ref|YP_599955.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS2096] gi|94541481|gb|ABF31530.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS9429] gi|94545364|gb|ABF35411.1| Exodeoxyribonuclease III [Streptococcus pyogenes MGAS2096] Length = 303 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 38/327 (11%), Positives = 91/327 (27%), Gaps = 57/327 (17%) Query: 3 RKYVLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 + +++ + + + +++L+SWNI++L+ + + R + Sbjct: 7 KSLIVSFFVTITTRLSVRKRYQMKLISWNIDSLNAALTGESPRALLSR------AVLDTL 60 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 DADI+ +QE T ++ + S + + KN Sbjct: 61 VAQDADIIAIQETKLSAKGPTKKHIETLLSYFPNYLHVWRSSVEPARKGYAGTMFLYKNT 120 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 ++P +GA + G ++ + + +V ++ + + Sbjct: 121 LNPVITFPEIGAPTTMDAEGR------IITLEFEDFFVTQVYTPNAGDGLRRLDDRQIWD 174 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWK 226 + L ++ P + GD+N R + + Sbjct: 175 HKYADYLTEL--------DAQKPVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERQGFT 226 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFS 276 + F + + IDY++ + + Sbjct: 227 NLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGWRIDYWLASNRLVDKVKRSEMI 286 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303 + DH PI +D D Sbjct: 287 SSGERQ-----------DHTPILLDID 302 >gi|84497257|ref|ZP_00996079.1| hypothetical protein JNB_13723 [Janibacter sp. HTCC2649] gi|84382145|gb|EAP98027.1| hypothetical protein JNB_13723 [Janibacter sp. HTCC2649] Length = 1771 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 46/352 (13%), Positives = 86/352 (24%), Gaps = 69/352 (19%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGV-----------------------SLWKNSVKRTT 51 V V+L ++N+ G + N+ R Sbjct: 590 ATPEDVGGDVKLATFNVLNFFPTTGEEFVTSGLGTCTYFNDRDGNHITNNSCTNNGPRGA 649 Query: 52 SD-------YTLLRQYAKNLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTE 96 ++ + ADIV L+E+ + A+ ++ T Sbjct: 650 ANDANLTRQRAKIVAAINTAGADIVSLEELENSVQFGKNRDFAIGELVTALNADAGAGTW 709 Query: 97 RLINHSKRDSN----NDIHTAIAVRKKNVRVLQQSYPLLG-AKDSFSRAGNRRAVELLVE 151 + + I T + V ++ +S L + + A R + + Sbjct: 710 AFAPSASVLPPLAEQDVIRTGFIYKPAQVALVGESVVLADQSTGTEPFADAREPLAQAFK 769 Query: 152 INGKK----IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL--VPF 205 G V+ H KS + + QA L + K + Sbjct: 770 KVGSPDANAFGVVVNHFKSKGSGTPDPDGQGNANDRRILQANALVTFANDFKTTRGISRM 829 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 +AGDFN + +D+ + + Sbjct: 830 FLAGDFNAYSEEDPI------QVLEAAGYTNLESSSKPGEETYNFDGQIGSLDHVLANAP 883 Query: 266 AYKFLIQESFSEILYNEDDIKSRGK--------------RLSDHCPISIDYD 303 A + +I E + R SDH P I + Sbjct: 884 ALADVNAVDIWDINGYESVYYEYSRFNTNATNLYAPNQFRSSDHSPEIIGIN 935 >gi|323450990|gb|EGB06869.1| hypothetical protein AURANDRAFT_71920 [Aureococcus anophagefferens] Length = 556 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 39/332 (11%), Positives = 83/332 (25%), Gaps = 51/332 (15%) Query: 23 KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +R+ S+NI + + ++ Q + +AD++ LQE + Sbjct: 224 SLRVASYNILAEIYATAHAYPYCERWALEWQYRARVVIQELIDTNADVICLQEAQRDHFE 283 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 V P + + + + A+ K + + D Sbjct: 284 RDVEPAMKSAGYEGLFTQKSREAMGAAGKVD-GCAMFWKTTKYRVAEQRNVSFNDLAYAE 342 Query: 141 GNRR--------AVELLVEINGKKIWVLDIHLKSFCF-------LDSLENTYSPSCSLLS 185 A + + V+ + ++ ++ Sbjct: 343 AQNANLSERDEHAYLTRLVKDNVAQLVVLEDYPAPGHRSRRLAMANTHLYSHKDFPDTKL 402 Query: 186 QQAQWLKDWITQKKE---SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI------- 235 Q+ L + +P V+AGD N + + I+P + Sbjct: 403 WQSLCLLRALESFANRSRETLPLVLAGDLNSGPDSSVYELISTQAINPRHPDLAPRVGQF 462 Query: 236 ---------------------RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 N + + +DY DQ + + Sbjct: 463 GAVNVLPDARQISHRLPLGSAYATVAGAEPEFTNYTMGFRGTLDYIWFDQTMLRCAAVAT 522 Query: 275 F--SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + L D + SDH + D+ F Sbjct: 523 IPTVDALTRAGDALPNPQYPSDHTMLIADFLF 554 >gi|306825594|ref|ZP_07458933.1| RgfB protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431955|gb|EFM34932.1| RgfB protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 271 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 79/281 (28%), Gaps = 54/281 (19%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95 + LL Q + D D++ QE+ +V N + S Sbjct: 17 EEKFQLLLQDILDKDYDLICFQEINQEMTSPEVEVNNHYQALPSAEPIHQDHYVRLLVEK 76 Query: 96 -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148 + H +A+ K ++ L+ D + RR V Sbjct: 77 LAEKGKNYYWTWAYNHIGYDRYHEGVAILSKTPIKARE--ILVSDVDDPTDYHTRRVVLT 134 Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208 E+ GK++ V +HL + E + + L P ++A Sbjct: 135 ETEVEGKELAVASVHLSWWDKGFQEEWARFEAV------LKELNK----------PLILA 178 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263 GDFN G + D+L + S + K IDY Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDALEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ + G ++SDH ++ + Sbjct: 239 KDL---------EVESLHVVFDGQNGPQVSDHYGLNAVLTW 270 >gi|283955329|ref|ZP_06372828.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 414] gi|283793089|gb|EFC31859.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 414] Length = 252 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 78/304 (25%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + D + QE+ A Sbjct: 1 MKLLSWNVNGLRAICDKNA---------------LDWITKEKIDFIGFQEI---KAHEDK 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FPK + + + + ++ + +++ + F R Sbjct: 43 FPKKIYEYPFKHMYFNSAKRA-----GYSGVMSLCNFDSEVKK-------CEFFDDEEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++E K I + +I+ + + N + L Sbjct: 91 -----VLEHRFKNIALFNIYFPNGQKDEERLNFKMKFYADFLVYLDKLLK-------DGF 138 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GD N L + + + F + Sbjct: 139 EIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF + Q L E ++ SDH P+ Sbjct: 199 SWWSYRMKARERNVGWRIDYFFISQGLQNRLKNAFIREDIF-----------GSDHAPVG 247 Query: 300 IDYD 303 I+ D Sbjct: 248 IEID 251 >gi|229077725|ref|ZP_04210355.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2] gi|228705666|gb|EEL58022.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2] Length = 263 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 35/269 (13%), Positives = 73/269 (27%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS--------- 102 L + + + D++ LQE+ V F + Sbjct: 18 EKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGLLLLEELKALHVKDYNIT 77 Query: 103 ---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ + + ++ + +D+ R+ V + NGK I Sbjct: 78 WDLSHIGYDVYEEGLAIITKHNIIKEDTFFISKNEDTTYWK-TRKIVSTTIAYNGKDITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKGQVDRLMERVD----SNKLAFLMGDFNNNAWLEG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +Q S Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQ---------S 233 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +SDH + + D Sbjct: 234 KKVHSSKVIFNGTNRNVISDHFGVEVQLD 262 >gi|297820688|ref|XP_002878227.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis lyrata subsp. lyrata] gi|297324065|gb|EFH54486.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis lyrata subsp. lyrata] Length = 598 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 89/349 (25%), Gaps = 64/349 (18%) Query: 18 ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 ++S+NI +T + + + T L + ADIV LQE+ Sbjct: 242 PLSMGSFTVLSYNILSDTYASSDIYNYCPTWALAWTYRRQNLLREIVKYRADIVCLQEVQ 301 Query: 76 S---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + + K+ + + + + D R + V + Sbjct: 302 NDHFEEFFSPELDKHGYQGLFKRKTNEVFVGNTNTIDGCATFFRRDRFSHVKKYEVEFNK 361 Query: 133 AKDSFSRA-----GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY---------- 177 A S + A + A+ LV+ N I VL+ S + + Sbjct: 362 AAQSLTDAIIPVSQKKTALNRLVKDNVALIVVLEAKFGSQAADNPGKRQLLCVANTHVNV 421 Query: 178 -SPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNN------------DD 223 + Q L + + + +P ++ GDFN + D Sbjct: 422 PHELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNTVPASAPHTLLAMGKVDPLHPDL 481 Query: 224 FWKTIDPNDSLIRFPK-----------------------------EKDSRCNANKNLRNK 254 + + + N Sbjct: 482 MVDPLGILRPHTKLTHQLPLVSAYSSFARMGGSVIAEQQRRRMDPASNEPLFTNCTRDFI 541 Query: 255 IPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +DY + + E E +D + SDH + ++ Sbjct: 542 GTLDYIFYTADTLAVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 590 >gi|288801511|ref|ZP_06406963.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 299 str. F0039] gi|288331592|gb|EFC70078.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 299 str. F0039] Length = 314 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 28/256 (10%), Positives = 71/256 (27%), Gaps = 31/256 (12%) Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 DIV L E+ + + + + + + S + +A+ Sbjct: 72 PDIVALCEVENDSVMRDLTLRAPLRTL-----RYQYVMTQSPDLRGIDVALLYSPFTFSL 126 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + R + + + N + ++ +H S + S + Sbjct: 127 LQCHSVRVNPIKGMRPTRDILYVSGRVFNADTLHIMVVHAPSRMGGE------HFSRAFR 180 Query: 185 SQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 + A+ + + + + I GDFN + L + + K + Sbjct: 181 CEVAKKINEITDSIRSTSVNPNIAILGDFNDYVGNLSLEMLSNNGLFD---ISANVKGLN 237 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI--------------LYNEDDIKSR 288 K +D+ + + K+ + ++ + Sbjct: 238 GTKGTYKYKGEWDSLDHIFVSEPLRKYWLDCFINDADFLLCNDEKYGGKQPFRCYIGAKY 297 Query: 289 GKRLSDHCPISIDYDF 304 + SDH P+ ++F Sbjct: 298 HEGYSDHLPLVAHFEF 313 >gi|310817728|ref|YP_003950086.1| endonuclease/exonuclease/phosphatase domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309390800|gb|ADO68259.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella aurantiaca DW4/3-1] Length = 1024 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 40/299 (13%), Positives = 80/299 (26%), Gaps = 43/299 (14%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 P +++ + ++N+ L + L T ++ DADI+ LQ Sbjct: 126 ASPGALPPPEELTVATFNV--LFDLHEAELLD-----TPRRIPAALSLLRSADADIIALQ 178 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ A + ++ + + + Sbjct: 179 EVTEPFLRALLETPWIREHYFL------SEGPGAATVTPYGQLLLSRFPFASLSQCVFSR 232 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 K + + + G +WV +HL S S S + Q + + Sbjct: 233 DKR---------VIAGEIRLKGGTLWVATLHLTSHRAH--------ASSSSRAAQLRAIV 275 Query: 193 DWITQKKESL---VPFVIAGDFNRKINYLGNND-------DFWKTIDPNDSLIRFPKEKD 242 W V+AGDFN + + D W + P + F E++ Sbjct: 276 GWANALGTQGLHSPDVVLAGDFNFSEDAPEGHAFAQHGFTDVWPLLRPGEPGYTFDPERN 335 Query: 243 SRCNANKNLRNKIPIDYFVM---DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +D ++ + L + SDH + Sbjct: 336 GLATVMTVSGRRQRLDRVLVRSPSGRLTPRAVTLFGETPLPAPEAPAGGPLFTSDHFGV 394 >gi|50736245|ref|XP_419093.1| PREDICTED: similar to RP1-30M3.3 [Gallus gallus] Length = 369 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 46/288 (15%), Positives = 89/288 (30%), Gaps = 48/288 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L++WNI+ L + Y D+VFLQE+ Sbjct: 120 SFSLITWNIDGLDLGN-----------LQERARGVCSYLALYSPDVVFLQEV-------- 160 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + TA+ ++K V+VL+Q + Sbjct: 161 ---IPPYLCILQRRAGGYTIIPGNVDGYFTAMLLKKPRVKVLKQEIIRFPTT-----SMM 212 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + V I+G ++ ++ HL+S +Q Q + + + + + Sbjct: 213 RNLLVVHVNISGNELCLMTSHLEST----------RDHSKERMKQLQIVLNKMQE-ESQS 261 Query: 203 VPFVIAGDFNRKINY-------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + GD N + + N D W+ + R+ + S N + K+ Sbjct: 262 TTVIFGGDTNLRDSEVAKLGGLPKNITDIWEFL-GKPQHCRYTWDTSSNTNLRIESKCKL 320 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D A I + + G+ SDH + +D Sbjct: 321 RFDRLYFRPAAEGGHI--IPRNMDLIGLEKLDCGRFPSDHWGLLCRFD 366 >gi|74198544|dbj|BAE39752.1| unnamed protein product [Mus musculus] Length = 608 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 82/314 (26%), Gaps = 33/314 (10%) Query: 24 VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R VS+NI S L+++ +AD++ LQE+ Sbjct: 294 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDR 353 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + P R+ H + + + L + Sbjct: 354 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFRLLSQHDISFQEALKSDPLHKEL 413 Query: 136 SFSRAGNRRAVELLVEINGK-KIWVLDIHLKSF---CFLDSLENTYSPSCSLLSQQAQ-- 189 A N A E +++ + +I VL S C ++ + + Q + Sbjct: 414 LEKLALNPLAQEKVLQRSSVLQISVLQSTTDSSKKICVANTHLYWHPKGGYIRLIQMEVA 473 Query: 190 -WLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPNDSLIR 236 +++ +P + GDFN + + D + S+ Sbjct: 474 LVHIRHVSRDLYPGIPVIFCGDFNSTPSTGMYHFVISGSIAEDHEDWASNGEEERCSMPL 533 Query: 237 FPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGK 290 K N +DY +D + S Sbjct: 534 SHCFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNTLEVEQVIPLLSHEEVTTHQALPSVS 593 Query: 291 RLSDHCPISIDYDF 304 SDH + D + Sbjct: 594 HPSDHIALVCDLKW 607 >gi|134297280|ref|YP_001121015.1| exodeoxyribonuclease III Xth [Burkholderia vietnamiensis G4] gi|134140437|gb|ABO56180.1| exodeoxyribonuclease III Xth [Burkholderia vietnamiensis G4] Length = 257 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 82/307 (26%), Gaps = 79/307 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+++ N+N + + + +AD V +QE + + + A Sbjct: 2 MRVITANLNGIRSAAKKGFF---------------DWLGEQNADCVCVQEIKVSADDLPA 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + ++ +S + + +G S Sbjct: 47 EFVEPHGFKSYFHHAAKKGYSGAGVYSRREPDDVI--------------IGFGSSEFDPE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R VE K+ V+ +++ S + + LK Sbjct: 93 GRY-----VEARYGKLSVVSVYVPSGSSGEERQQAKYRFMDEFMPHLAELKQ-------- 139 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD N + + + + + + D R Sbjct: 140 QREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTQLFDEVGYVDVFRTLDPRPE 199 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + S + + SDH P Sbjct: 200 QYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKSTSI-----------FKDIKFSDHAP 248 Query: 298 ISIDYDF 304 +++DYD+ Sbjct: 249 LTVDYDY 255 >gi|255729400|ref|XP_002549625.1| hypothetical protein CTRG_03922 [Candida tropicalis MYA-3404] gi|240132694|gb|EER32251.1| hypothetical protein CTRG_03922 [Candida tropicalis MYA-3404] Length = 430 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 43/301 (14%), Positives = 79/301 (26%), Gaps = 36/301 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 R+ S NI E + R + ++ + I+ LQE+ Y + + Sbjct: 137 FRIYSHNIKNGGNHELSPGEQEWTARLVPLAASM-RFNTLVQNSIITLQEVYKYQMLDIM 195 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS------F 137 N D I + K ++ L KD + Sbjct: 196 NELNRHEPGKWEYYGRGRIDGD-EVGEFVPILWKAKEWGLVYSDTIWLNEKDPRTSVQGW 254 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R A + ++ ++ + F S L+ + + + W Sbjct: 255 DAVYVRIASFVTLKHKETNTYLNVFNSH---FDHIGVEAQLGSTELILDKMKEINQW--- 308 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-----RCNANKNLR 252 P GD N + N + + + + + + + S Sbjct: 309 ------PSFFCGDLNLEPNSKPHKKLTSELVSSVELVTPYNRYGHSWSSVTGFQGQVLKE 362 Query: 253 NKIPIDYFVMDQ-----------NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + + Y K G+ +SDH PI D Sbjct: 363 GGQNIDYIFAPKYAQSIDKETECSGNSVFDNIDLRLYQYGMLHSKFNGRYISDHRPIVAD 422 Query: 302 Y 302 Y Sbjct: 423 Y 423 >gi|86137122|ref|ZP_01055700.1| hypothetical protein MED193_15647 [Roseobacter sp. MED193] gi|85826446|gb|EAQ46643.1| hypothetical protein MED193_15647 [Roseobacter sp. MED193] Length = 360 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 41/354 (11%), Positives = 98/354 (27%), Gaps = 60/354 (16%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 I Y+ L+ + A+ +R+ ++N LS + L ++ + + Sbjct: 11 ILPYLTLLIPLVALPRLPQAETLRIATFNTE-LSRKGPGLLLRDIERGEDKQIAAVIAVI 69 Query: 62 KNLDADIVFLQEMG---SYNAVAKVF-----PKNTWCIFYSTERL--------------- 98 + DI+ LQ + + A+ + + + ++++ Sbjct: 70 AEANPDILLLQGIDWDYNNQALKALTQRLAQAGSPYPHLFASQPNAGLATELDLDGDGRL 129 Query: 99 --INHSKRDSNNDIHTAIAVRKKNVRVLQQSYP-------------LLGAKDSFSRAGNR 143 S+ + +AV ++ VL + L D + Sbjct: 130 GGPGDSQGYGDYTGRAGLAVLSRSPLVLDEMQDLSALLWREIPGATLPQHPDGSPFPSPQ 189 Query: 144 RAVELLVE-----------INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + NG+++ +L F + + + + +L Sbjct: 190 AQAIQRLSSTAHWVLPIMLANGQRLTLLCFQAAPPLFDGAEDRNGLRNADEIRLWQVFLD 249 Query: 193 DWI--TQKKESLVPFVIAGDFNRKINY-LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + FVI G N N G D + + P + Sbjct: 250 GLLPVELAPPPTRRFVIVGGANLDPNQGDGRRDSIAQLLQDRRLQDPLPYSTQANTATVD 309 Query: 250 N-LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ +DY + + + + + + S S H + +D Sbjct: 310 WGEGRRMRVDYLLPSKE---WQVAAAGVVWP---ESDSSPAAHASRHRLVWVDL 357 >gi|254166764|ref|ZP_04873618.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469] gi|289596498|ref|YP_003483194.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469] gi|197624374|gb|EDY36935.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469] gi|289534285|gb|ADD08632.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469] Length = 255 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 80/304 (26%), Gaps = 74/304 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ L+SWN+N + + + DI+ LQE+ + Sbjct: 2 ELLLISWNVNGIRACVRNGF---------------LDFLEKYKPDILALQEIKATED-NI 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + ++ + A+ K + + DS R Sbjct: 46 PIEVRYYPDYHKYWNPAK-------KKGYAGTALFTKIEPLNIKFGIGEDKFDSEGR--- 95 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 ++ +K ++++ + + + + L+ L+ Sbjct: 96 ------VITAEYEKFYLVNAYFPNSQHGLTRLDFKIEFDKLIHSYLNELRK--------K 141 Query: 203 VPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P ++ GDFN + + + K+ Sbjct: 142 KPVILCGDFNVAHKEIDLANPKQNVKNAGFTPQERAWMDEFLQDGYIDTFRMFTKEGGHY 201 Query: 247 ANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 R K +DYFV+ + + +Y SDH PI+ Sbjct: 202 TWWTYRFKARERNIGWRVDYFVVSEELKDKVKSSWILSEVY-----------GSDHAPIA 250 Query: 300 IDYD 303 + D Sbjct: 251 MVLD 254 >gi|228963475|ref|ZP_04124632.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar sotto str. T04001] gi|228796169|gb|EEM43620.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar sotto str. T04001] Length = 263 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 35/269 (13%), Positives = 73/269 (27%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 18 EKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ + + ++ + +D+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK-TRKIVSTTIAYNGKDITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKGQFDRLMERVD----SNKLAFLMGDFNNNARLEG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +Q S Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHSLRIDLILCNQ---------S 233 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +SDH + + D Sbjct: 234 KKVHSSKVIFNGTNRNVISDHFGVEVQLD 262 >gi|146421619|ref|XP_001486754.1| hypothetical protein PGUG_00131 [Meyerozyma guilliermondii ATCC 6260] Length = 364 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 77/306 (25%), Gaps = 38/306 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 VRL + NI + +R + + A +V LQE+ + + Sbjct: 65 VRLYTHNIR-FDNHNLDKHERYWSERKHLVTSSIDYNTDASFASVVCLQEVLHHQLQDIL 123 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-KKNVRVLQQSYPLLGAKD----SFS 138 F N + I R V +++ LL + Sbjct: 124 FNLNNKDTRDEWTYYGVGRSDGYTRGEYAPILYRTSDWDLVDNKTFWLLETPRIPSKGWD 183 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 A R + + + L+ F + AQ + + + Sbjct: 184 AALERIVTMVTLRSKLNPLVTLNFFNTHF---------DHRGKAARRHLAQLIANKMENY 234 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL--IRFPKEKDSRCNANKNLRN-KI 255 + P + GDFN + + + +L Sbjct: 235 --NNYPSFLCGDFNTQPTDEPYQILIKHGMKDSRALIDHLHHYGHTGTFTGFNKHNEANS 292 Query: 256 PIDYFVM------DQNAYKFLIQESFSEILYNEDDIKS------------RGKRLSDHCP 297 IDY + ES + ++ +SDH P Sbjct: 293 VIDYVWAPYFAENGNDQPSMETTESINYYNWDFHKTHKIALRSFAILHSYYDFYMSDHRP 352 Query: 298 ISIDYD 303 +S DYD Sbjct: 353 VSADYD 358 >gi|187928145|ref|YP_001898632.1| endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12J] gi|187725035|gb|ACD26200.1| Endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12J] Length = 287 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 39/302 (12%), Positives = 88/302 (29%), Gaps = 47/302 (15%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 +++WNI +G S+ R + ++ D++ LQE+ S + P Sbjct: 5 ILTWNIQWGRGADGHV----SLARQLKQGREMAEF------DVLCLQEVTSGFSDLPGQP 54 Query: 86 KNTWCIFYSTERLINHS--------KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + ++ + + + A+ + Q + L D+ Sbjct: 55 GADQWSELAEALGSEYTVIGGFALERHNGAHVQRFGNAIATRLPVHYIQRHALPCPPDAT 114 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD-----SLENTYSPSCSLLSQQAQWLK 192 R A+E +V+ + ++ HL+ + L + Q L Sbjct: 115 PC-MPRMAIEAVVQAPFGVLRIVTTHLEYYSELQRVAQIDALRAIHTEGCARANQPATLG 173 Query: 193 DWIT----QKKESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRC 245 + +I GDFN K + + F + +D+ Sbjct: 174 AEPEAGPFRPLAQTKATIICGDFNCKADSMPKRLATAPFAREPALHDAWEIAHGATPQPP 233 Query: 246 NANKNLRNKIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 R D+ ++ + +++ + + SDH P+ + Sbjct: 234 TFGVYDRADWTEPAYACDFMLISEPLKPRVLRLEIN-----------SATQASDHQPMLL 282 Query: 301 DY 302 Sbjct: 283 AL 284 >gi|42779563|ref|NP_976810.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus ATCC 10987] gi|42735479|gb|AAS39418.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus ATCC 10987] Length = 263 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 77/269 (28%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWC------------IFYSTERLI 99 L + + + D++ LQE+ V ++ + Sbjct: 18 EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALYVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ V + ++ + KD+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKDQVNRLMERVD----SNELSFLMGDFNNNARLQG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +++ + Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKVRSSKVI 242 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ N +SDH + + D Sbjct: 243 FNGTNRNV---------ISDHFGVEVQVD 262 >gi|146307309|ref|YP_001187774.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp] gi|145575510|gb|ABP85042.1| Endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp] Length = 262 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 33/256 (12%), Positives = 67/256 (26%), Gaps = 43/256 (16%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNA-----VAKVFPKNTWCIFY-STERLINHSKRDSN 107 LR + AD+VFLQE+ +A + S + + Sbjct: 41 LPELRSAVQATGADLVFLQEVLGSHAMHAKRFQDWPSVPQYEFLADSMWPQFAYGRNAVY 100 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKS 166 A+ + + + + + R + +++ G ++ + +HL Sbjct: 101 PAGDHGNALLSRFPILEYHNLDVTVSG-----TEQRGLLHCRLDVPGHAEVHAICVHLGL 155 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 +Q L + P ++AGDFN Sbjct: 156 R--------------ERHRRQQLGLLLDLLATLAPAAPVIVAGDFNDWRQRAD------D 195 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + P+ F + + +D + S Sbjct: 196 QLAPHALTEVFKHHHGKPARSFPARCPLLRLDRIYVRNATALKPQVLS-----------T 244 Query: 287 SRGKRLSDHCPISIDY 302 LSDH P++ + Sbjct: 245 RPWSHLSDHAPLAAEI 260 >gi|120435157|ref|YP_860843.1| hypothetical protein GFO_0800 [Gramella forsetii KT0803] gi|117577307|emb|CAL65776.1| conserved hypothetical protein, membrane [Gramella forsetii KT0803] Length = 344 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 41/292 (14%), Positives = 78/292 (26%), Gaps = 61/292 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L+S+N+ + E + + K + DI+ +QE Sbjct: 100 DFSLMSYNVRMFNAYEWSDRKDIP--------EKITGFIKENNPDILCVQE--------- 142 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHT---AIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + A+ K + Q S Sbjct: 143 -------HYIGAAALSEVYPYEYIKLKGKNAEFGSAIFSKYPIINQASLDFP------HD 189 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ--------QAQWL 191 N LV + V ++H +S +++ L Q + Sbjct: 190 GNNNAIFTDLVIDKKDTVRVYNVHFQSLNIKPGIDDLQKEDSKKLLGRIGYGFSLQQEQA 249 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-NANKN 250 + + K+S +IAGDFN + + I +D E S + K Sbjct: 250 EILLADIKKSPYRTIIAGDFNNT-----SFSYIYDLIKQDDRFNDAFLEAGSGFGKSFKL 304 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ ++ E ++ + SDH P+ Sbjct: 305 NYFPLRIDFLLI--------------ENNMKINEFRILDIDYSDHYPVLTKI 342 >gi|117619849|ref|YP_857930.1| nuclease [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561256|gb|ABK38204.1| nuclease [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 714 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 48/381 (12%), Positives = 97/381 (25%), Gaps = 97/381 (25%) Query: 16 CTASVAQ--KVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT----------------- 55 T + A +R+ S+N+ N + V N + + +D Sbjct: 307 STPARADGTDLRVGSFNVLNYFTSHSSVGGALNVLCKDQADADSAKGCNRGAKNLEDFQK 366 Query: 56 ---LLRQYAKNLDADIVFLQEMGSYNA--------------VAKVFPKNTWCIFYSTERL 98 + +DAD++ L EM + + + + L Sbjct: 367 QRAKIVNAITEMDADLLGLMEMENNGFDSHSAISDLVLALNAQQKEADKQYAFVTLPKAL 426 Query: 99 INHSKRDSNNDIHTAIAVRKKNV-------RVLQQSYPLLGAKDSFSRAGNRRAVELLVE 151 + + I A+ R + + L AK +A R ++ Sbjct: 427 LQGEHYFGGDAIMVAMIYRPAKLAPQGDANVITLPVQKYLDAKGVEKQASQRDSLVQTFT 486 Query: 152 ING--KKIWVLDIHLKSFCFLDSLENTYSPSC-------SLLSQQAQWLKDWITQKKESL 202 + G + ++ HLKS A+ L + +++ Sbjct: 487 VEGSKDPLTLVVNHLKSKGSGCLENLDGKEPADLQGKCTEFRVSAAKVLGEAVSKLPGQ- 545 Query: 203 VPFVIAGDFNRKINYLGNN---------------DDFWKTIDPN-------------DSL 234 ++ GDFN + + Sbjct: 546 --VLLVGDFNSYAREDAIRVLTDYVPTDGQRKIVSASQTFLGDQVFEQTGSEVAKSYGLV 603 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291 K + + +DY + + +I + I E ++ G+ Sbjct: 604 DMNVKFNKEKAISYSYEAELGTLDYALANPALAGKVIAVADWHINSFESNLFEYGRDFTG 663 Query: 292 ----------LSDHCPISIDY 302 SDH PI +D Sbjct: 664 DMIKSDNPFSASDHDPIIVDL 684 >gi|290789945|pdb|3FZI|A Chain A, 1.9 Angstrom Structure Of The Thermophilic Exonuclease Iii Homologue Mth0212 gi|290789950|pdb|3G0A|A Chain A, Mth0212 With Two Bound Manganese Ions gi|290789955|pdb|3G1K|A Chain A, Mth0212 (Wt) Crystallized In A Monoclinic Space Group gi|290789956|pdb|3G1K|B Chain B, Mth0212 (Wt) Crystallized In A Monoclinic Space Group gi|290789957|pdb|3G2C|A Chain A, Mth0212 In Complex With A Short Ssdna (Cgta) gi|290789958|pdb|3G2C|B Chain B, Mth0212 In Complex With A Short Ssdna (Cgta) gi|290789969|pdb|3G3C|A Chain A, Mth0212 (Wt) In Complex With A 6bp Dsdna Containing A Single One Nucleotide Long 3'-Overhang gi|290789970|pdb|3G3C|B Chain B, Mth0212 (Wt) In Complex With A 6bp Dsdna Containing A Single One Nucleotide Long 3'-Overhang gi|290789976|pdb|3G3Y|A Chain A, Mth0212 In Complex With Ssdna In Space Group P32 gi|290789977|pdb|3G3Y|B Chain B, Mth0212 In Complex With Ssdna In Space Group P32 gi|290789979|pdb|3G4T|A Chain A, Mth0212 (Wt) In Complex With A 7bp Dsdna gi|290789980|pdb|3G4T|B Chain B, Mth0212 (Wt) In Complex With A 7bp Dsdna Length = 265 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 82/302 (27%), Gaps = 81/302 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81 ++++SWN+N L ++ DI+ LQE+ + Sbjct: 4 LKIISWNVNGLRAVHRKGF---------------LKWFMEEKPDILCLQEIKAAPEQLPR 48 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K+ + F++ + + +A+ K + + D+ R Sbjct: 49 KLRHVEGYRSFFTPAERKGY----------SGVAMYTKVPPSSLREGFGVERFDTEGRIQ 98 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + +I+ + + + + + ++++S Sbjct: 99 I---------ADFDDFLLYNIYFPNGKMSEER-------LKYKLEFYDAFLEDVNRERDS 142 Query: 202 LVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245 +I GDFN + K I+ + + +S Sbjct: 143 GRNVIICGDFNTAHREIDLARPKENSNVSGFLPVERAWIDKFIENG--YVDTFRMFNSDP 200 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +DYF +++ + + SDHC Sbjct: 201 GQYTWWSYRTRARERNVGWRLDYFFVNEEFKGKVKRSWIL-----------SDVMGSDHC 249 Query: 297 PI 298 PI Sbjct: 250 PI 251 >gi|148272146|ref|YP_001221707.1| putative exonuclease III [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830076|emb|CAN01005.1| putative exonuclease III [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 281 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 36/322 (11%), Positives = 85/322 (26%), Gaps = 84/322 (26%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +R+ S N N + + + + D DI+ +QE+ + + Sbjct: 2 PSNLRVASINTNGIRA---------------AFRKGMGDWLATRDVDILAIQEVRAETSD 46 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + W + + +A+ + + + DS R Sbjct: 47 IEGLLGPEWNVLHDAATAKG----------RAGVAIASRRRAEIHRVAIGEEDFDSAGRW 96 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +E +++G + V+ ++ S + ++ + ++ + + Sbjct: 97 -----LEADYDVDGTIVTVVSAYVHSGEVGTAKQDEK-------WRFLDGMERRLPEIAA 144 Query: 201 SLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSR 244 V+ GD N L + + + I Sbjct: 145 HSELAVVVGDLNVGHRELDIRNWKGNVKRAGFLPRERAYLDRILGARGEEITGVDGSTGP 204 Query: 245 C---------------NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILY 280 + IDY + + ++ Y Sbjct: 205 GLGWVDVGRQQAGEVDGPYTWWSWRGKAFDNDTGWRIDYQLATPALAEKVVG-------Y 257 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 D ++ +R SDH P+ +DY Sbjct: 258 AVDRAEAYDQRWSDHTPVVVDY 279 >gi|327265929|ref|XP_003217760.1| PREDICTED: LOW QUALITY PROTEIN: 2',5'-phosphodiesterase 12-like [Anolis carolinensis] Length = 559 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 43/327 (13%), Positives = 84/327 (25%), Gaps = 45/327 (13%) Query: 18 ASVAQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + +R VS+N+ LS +LL++ +AD++ Sbjct: 237 PAGPASLRAVSYNVLADAYAQSELSRTVLYPYCAPYALEMDYRQSLLQKELLGYNADLLC 296 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 LQE+ + P RL R K + + L Sbjct: 297 LQEVDRAAFADGMGPALDAAGLEGLFRLKERQHEGLAT-----FFRRDKLRLLTRHDVAL 351 Query: 131 L-GAKDSFSRAGNRRAVELLVEINGK-----------KIWVLDIHLKSFCFLDSLENTYS 178 D + + R A++ + K + ++ + C ++ + Sbjct: 352 HRALLDDPAHSPLRHALDACPALRDKVLQRSSVLQVSVLQTINDPSRQICVANTHLYWHP 411 Query: 179 PSCSLLSQQAQ---WLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDD 223 ++ Q +T P + GDFN + + D Sbjct: 412 KGGNIRLIQIAIALSHLRHVTHDLYPGTPLLFCGDFNSTPSTGTYGFVINGSIAEDHEDW 471 Query: 224 FWKTIDPNDSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277 +P+ S+ + N +DY +D + S Sbjct: 472 RSDGEEPHCSMSLTHPFRLKSACGEPAYTNYVGGFHGCLDYIFIDADALEVEQVIPLPSH 531 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 SDH + D + Sbjct: 532 EEVTTHQALPSVSHPSDHIALVCDLKW 558 >gi|298504828|gb|ADI83551.1| endonuclease/exonuclease/phosphatase family protein [Geobacter sulfurreducens KN400] Length = 335 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 41/331 (12%), Positives = 90/331 (27%), Gaps = 57/331 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 V++ SWN+ L + + + + + L DI+ L E + A Sbjct: 2 GTVKITSWNVAHL----ERLTRAHPTAKERRRRDAVVREIRELAPDILCLLEGPAGEAGI 57 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV--------------LQQS 127 + + + + + + D VR+ + + Sbjct: 58 DLVANDLLDGEWVAVKAAD-GNYATRGDQWIWFLVRQDLADRASLLPVGTWDTFAGVSWT 116 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 L G + R L+++ NG ++ + +HLKS + + Sbjct: 117 CHLWGEFTEGTHRHYRHPQVLILDWNGLRVEFIGLHLKSKFINQGERLWRDERERFIREA 176 Query: 188 AQW----------LKDWITQKKES--LVPFVIAGDFNRKINYL--GNNDDFWKTIDPNDS 233 ++ +I K + GDFN F+ I Sbjct: 177 LTARIKMATEAVNVRAYIDAKFRQVGNPALFVLGDFNDGPGKEYFEEQYLFFDLIANIQG 236 Query: 234 LIRFP---------KEKDSRCNANKNLRNKIP-------IDYF-----VMDQNAYKFLIQ 272 + D C + P +D+ +++ + + Sbjct: 237 NVFATSRFLNHGLFDIPDELCWTVRFRDFVQPDRRPEILLDHILFTQGLVNGSLPWQVKP 296 Query: 273 ESFSEILYN---EDDIKSRGKRLSDHCPISI 300 + + + + SDH P+S+ Sbjct: 297 HAGKVEHEVHELVNAGLPKDSQTSDHRPVSL 327 >gi|322411221|gb|EFY02129.1| exodeoxyribonuclease III [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 275 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 83/305 (27%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + RT + DADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTGESPRALLSRT------VLDTLVAQDADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + S + + KN ++P +GA + G Sbjct: 55 KHVESLLSYFPDYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +V ++ + + L ++ Sbjct: 114 -----MITLEFEDFFVTQVYTPNAGDGLRRLEDRQIWDQKYADYLAEL--------DAQK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F N Sbjct: 161 PVLATGDYNVAHKEIDLANPGSNRRSPGFTDEERQGFTNLLAKGFTDTFRHLHGDIPNVY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRLVDKINRSEMISSGERQ-----------DHTPI 269 Query: 299 SIDYD 303 +D D Sbjct: 270 LLDID 274 >gi|307136223|gb|ADN34060.1| endonuclease/exonuclease/phosphatase family protein [Cucumis melo subsp. melo] Length = 481 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 83/302 (27%), Gaps = 54/302 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + V+++++N+ E + + L Q + D++ QE+ + Sbjct: 212 KPVKIMTYNV-WFREDLEL----------RNRMRALGQLIQRHSPDVICFQEV-TPAIYD 259 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 N W ++ + +HS+ + K P + Sbjct: 260 IFQITNWWKVYRCSVIKDSHSRGYF-------CMLLSKLPVKSFSCQPFPNS------IM 306 Query: 142 NRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R +E+ NG + V HL+S C N QA+ D++ Sbjct: 307 GRELCIGNLEVQNGISLTVATSHLESPCPAPPKWN--QMYSKERVVQAKQAVDFLK---- 360 Query: 201 SLVPFVIAGDFNRKINYLG----NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + GD N G + + + + S + N + Sbjct: 361 ETPNVIFGGDMNWDDKLDGQFPFPDGWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQKR 420 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---------------LSDHCPISID 301 +D F+ + S I + + K SDH + + Sbjct: 421 LDRFIC---KLQDFKVNSIEMIGTDSIPGLTYTKEKKVGKEMKTLELPVLPSDHYGLLLT 477 Query: 302 YD 303 Sbjct: 478 IS 479 >gi|296875948|ref|ZP_06900007.1| RgfB protein [Streptococcus parasanguinis ATCC 15912] gi|296433023|gb|EFH18811.1| RgfB protein [Streptococcus parasanguinis ATCC 15912] Length = 270 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 38/283 (13%), Positives = 77/283 (27%), Gaps = 54/283 (19%) Query: 48 KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST------------ 95 + + L++ D++ QE+ A V + S Sbjct: 14 ENAQQKFETLKEQILEAQYDVICFQEVNQEMASETVETDEYYQAAPSAVAIHKDHFVHVL 73 Query: 96 ----------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + ++ +AV + L+ L+ D + RR Sbjct: 74 VEELAAQGLHYYWTWAYNHIGYDHLNEGVAVLSRQP--LKADEILVSNMDDPTDYHTRRV 131 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++GK+I V +HL + ++ + Q ++ PF Sbjct: 132 AVAHTSVDGKEIVVGSVHLSW-------------WDKGFQFEWPRIEKYFNQVEK---PF 175 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-----PKEKDSRCNANKNLRNKIPIDYF 260 ++AGDFN G ++ DS I + + + + IDY Sbjct: 176 ILAGDFNNPAGQEGYETILSSSLKLQDSFIEAKETKGTYTVGPGIDGWTDNQVPLRIDYV 235 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +SDH + + Sbjct: 236 FASPE---------WEIKRLHVIFDGQNKPLVSDHYGLEAELS 269 >gi|91787259|ref|YP_548211.1| endonuclease/exonuclease/phosphatase [Polaromonas sp. JS666] gi|91696484|gb|ABE43313.1| Endonuclease/exonuclease/phosphatase [Polaromonas sp. JS666] Length = 345 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 31/262 (11%), Positives = 80/262 (30%), Gaps = 20/262 (7%) Query: 30 NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89 N+ L + + + ++ + Q + D+V +QE+ S A+ + + Sbjct: 35 NVGYLPLYQKGAFEIFNAEQRKLAALAITQG-NTVLPDVVCIQEVESLIALREFNERFLA 93 Query: 90 CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149 + L + R + + + K ++ A + +R +E+ Sbjct: 94 AAYPYAVVLDSRDLRQID------VGILSKYPLDSVATHVDDTAAGKY--IFSRDCLEVR 145 Query: 150 VEINGKKIWVLDIH-----LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE---- 200 + + L I+ L ++ + + QA + + + Sbjct: 146 LRVKKTAFVTLFINHFKSKLALGANEEARNRERAAANEKRQLQADTVAKLLKTRFPGAAF 205 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 F + GD N + K+ + + P+E+ + K + +D+ Sbjct: 206 QSDYFAVLGDLNDTPLAPQLSRLCLKSGLVDALAMLEPEERW--THYWKAKNSVSQLDHV 263 Query: 261 VMDQNAYKFLIQESFSEILYNE 282 ++ L Q + Sbjct: 264 LLSPALAGKLKQNGITVERRGI 285 >gi|302837660|ref|XP_002950389.1| hypothetical protein VOLCADRAFT_104648 [Volvox carteri f. nagariensis] gi|300264394|gb|EFJ48590.1| hypothetical protein VOLCADRAFT_104648 [Volvox carteri f. nagariensis] Length = 1732 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 32/309 (10%), Positives = 76/309 (24%), Gaps = 55/309 (17%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + ++ WNIN L+ ++ R + +L DI QE+ Sbjct: 12 AEAHPGVLNIMCWNINCLTPTVRNMELRHKSFRG---------FMDHLQLDIACFQEVKL 62 Query: 77 YNAV--AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 A ++ + F+++ TA A L G + Sbjct: 63 PAARITRELACVEGFQSFWAS-STSKPGYSGVTTWCRTATA-----APRDAAVDCLGGDE 116 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R + + +L++++ + + + + L+ Sbjct: 117 RPELDTEGRFVL-----TDHGAFVLLNVYVPN-----AGDRPERARLPYKLAFLRALRTK 166 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDF----------WKTIDP--NDSLIRFPKEKD 242 + + V+ GD N + + + Sbjct: 167 MDELTALGRQVVLVGDLNIAAERRDVHPTLDFDSMYDKQELAELSGLIAAYPDVWRHLHP 226 Query: 243 SRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + + IDY ++ ++ + S Sbjct: 227 DTEGSYTVWDERTSARAFNTGLRIDYVLVSPGLLPYVQSCEILTAAAIPP-------KWS 279 Query: 294 DHCPISIDY 302 DH I + Sbjct: 280 DHAAILLTL 288 >gi|29348242|ref|NP_811745.1| hypothetical protein BT_2833 [Bacteroides thetaiotaomicron VPI-5482] gi|29340145|gb|AAO77939.1| endonuclease/exonuclease/phosphatase-like protein [Bacteroides thetaiotaomicron VPI-5482] Length = 361 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 39/302 (12%), Positives = 86/302 (28%), Gaps = 67/302 (22%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++ +S+N+ + E + Y + +ADI+ LQE S Sbjct: 99 GSIKFLSYNVMGFNNLEKKEGKNP-----------ILSYLADSEADIICLQEYNSTKNKK 147 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + ++ + H + + +A K + + +S + Sbjct: 148 YLTDEDIRKALKAYPYRSIH----NPEKGGSQLACFSKFPILSARPIKYESTYNSSMQY- 202 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSL-----------------------ENTYS 178 +++N I +++ HL+S + Sbjct: 203 -------TLKVNEDTITLINNHLESNKLTKEDKVIYEDMIKDPNAKKVKTGLRQLIKKLA 255 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + ++ S QA + I K + GDFN + + + +D F Sbjct: 256 EASAIRSSQADSVAVAIANSKYPT--IIACGDFNDA-SISYTHRILTQQLDD-----AFT 307 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + ID ++ N + + + + SDH PI Sbjct: 308 QSGRGLGISYNLNKFYFRIDNILISPN--QKAYNCTVDRSIKD-----------SDHYPI 354 Query: 299 SI 300 Sbjct: 355 WC 356 >gi|225558763|gb|EEH07047.1| DNA lyase Apn2 [Ajellomyces capsulatus G186AR] Length = 636 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 83/344 (24%), Gaps = 84/344 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 VRL +WN+N + W R + + L+ADIV QE + + Sbjct: 2 VRLTTWNVNGIRNPFSYHPW-----REKRSFEAM---FDALEADIVIFQETKIQRKDLQD 53 Query: 82 KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVR----------------VL 124 + N W F+S + +S +R + Sbjct: 54 DMVLVNGWDCFFSLPKYKKGYSGVVIYTRNSICCPIRAEEGITGILCLPTSGSNLSSPTS 113 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS-- 182 + P + A ++ + + + +F + Sbjct: 114 FRDLPEEAQIGGYPTAEQLALSDVDAATLDSEGRCMILEFPAFVLIGVYCPANRDETRDG 173 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------------YLGN 220 + L + ++ GD N + Sbjct: 174 FRTGFVNVLDARVRNLAAMGKRVIVTGDLNISGSQIDSARALEGVRKGTLTDSEFVSSPV 233 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLR-----------------NKIPID 258 F + +D + +++ C R ID Sbjct: 234 RRIFNQLVDGGKVIGDRDHGRETPVLVDLCRKYHPDRLGMYTCWEQRVNARPGNYGARID 293 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 Y + D++ + + G SDHCP+ + Sbjct: 294 YVLCDRSMQDWFSASNIQ-----------EGLMGSDHCPVYAEL 326 >gi|218895489|ref|YP_002443900.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus G9842] gi|218543762|gb|ACK96156.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus G9842] Length = 263 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 35/269 (13%), Positives = 73/269 (27%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 18 EKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ + + ++ + +D+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK-TRKIVSTTIAYNGKDITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKGQFDRLMERVD----SNKLAFLMGDFNNNARLEG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +Q S Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQ---------S 233 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +SDH + + D Sbjct: 234 KKVHSSKVIFNGTNRNVISDHFGVEVQLD 262 >gi|149024967|ref|ZP_01836347.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP23-BS72] gi|168494239|ref|ZP_02718382.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC3059-06] gi|147929460|gb|EDK80455.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP23-BS72] gi|183575787|gb|EDT96315.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC3059-06] Length = 275 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 76/305 (24%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K S+P +GA Sbjct: 55 KHVEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPS-------- 106 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +++ G+ I + +++ + + Sbjct: 107 -----TMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEERQVWDAKYAEYLAK-LDKEK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 VLEID 274 >gi|119500018|ref|XP_001266766.1| transcription factor, putative [Neosartorya fischeri NRRL 181] gi|148886826|sp|A1CW67|CCR4_NEOFI RecName: Full=Glucose-repressible alcohol dehydrogenase transcriptional effector; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase gi|119414931|gb|EAW24869.1| transcription factor, putative [Neosartorya fischeri NRRL 181] Length = 750 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 40/361 (11%), Positives = 90/361 (24%), Gaps = 72/361 (19%) Query: 15 PCTASVAQKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + KV ++S+N S Q V L+ ++ D+DI+ LQ Sbjct: 372 SSSNHRTDKVTVLSYNTLCDSSATQSHYGYAPARVLSWEFRRELILNELRSHDSDIICLQ 431 Query: 73 EMG----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 E+ + ++ + +++ R + + D+ A + +L + Sbjct: 432 EIDQGSYNEYFREQLAYNDYKGVYWPRGRAMGMQEEDAKCVDGCATFFKASKFILLDKQL 491 Query: 129 PLLGAK-----------DSFSRAGNRRAVELLV----EINGKKIWVLDIHLKS------- 166 G D ++R + + ++V G + V++ HL Sbjct: 492 INFGQTAVRRPDAKGQDDIYNRLWQKDHIAVVVFLENRQTGSRFIVVNAHLYWDPAFKDV 551 Query: 167 -----------------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 C + + + + + Sbjct: 552 KLIQTAILMEELTKLSETYAKWPPCTDKAAFRFSKEEGQSETPPLEEPAPSMQYASGDQI 611 Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRC--- 245 P ++ GD N N + + F + Sbjct: 612 PLLMCGDLNSSPGSAAYNLIAHGRLDEEHPDLEKRLYGNLSKVGMTHPFKLKSAYGAIGE 671 Query: 246 --NANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N K +DY + + + + SDH + ++ Sbjct: 672 LPFTNYTPDFKDILDYIWYSSNSLHVSALLGEVDKDYLQRVPGFPNYHFPSDHIALLAEF 731 Query: 303 D 303 Sbjct: 732 T 732 >gi|260889173|ref|ZP_05900436.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia hofstadii F0254] gi|260861233|gb|EEX75733.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia hofstadii F0254] Length = 263 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 29/301 (9%), Positives = 79/301 (26%), Gaps = 60/301 (19%) Query: 24 VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++L++ N++ L E +L + D++ +QE+ Sbjct: 1 MKLLTINVHAWLEEN------------QMEKIDILAKDIAEKQYDVIAMQEVNQLMNNPI 48 Query: 83 VFPKNTWCIFY------------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 +F + + + + + +A+ ++ + + Sbjct: 49 IFDDIRQENYGWVLLEKLQEYTDTDYYYHWSNSHIGFSKYNEGVAIITRHKIKDEDEF-Y 107 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 S RR V + ++ G+ I H+ + Sbjct: 108 CTFAQSVRTISARRIVSITIDYKGQDIEFYSCHMNLPNCETEDMGENLRNILNR------ 161 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC----- 245 ++ ++ GDFN N + ++ I + + Sbjct: 162 --------SKTDNLKILMGDFNTDANGNPED---YQNILNQGLFDTYTLAEKKDSGVTVD 210 Query: 246 ---NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +++ IDY ++ +SDH + ++ Sbjct: 211 KGIHGWDQDKSQKRIDYIFCNKE---------IKVKESKVIFDGKNKGVVSDHFGVEVEI 261 Query: 303 D 303 + Sbjct: 262 E 262 >gi|39995817|ref|NP_951768.1| endonuclease/exonuclease/phosphatase family protein [Geobacter sulfurreducens PCA] gi|39982581|gb|AAR34041.1| endonuclease/exonuclease/phosphatase family protein [Geobacter sulfurreducens PCA] Length = 335 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 88/331 (26%), Gaps = 57/331 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 V++ SWN+ L + + + + + L DI+ L E + A Sbjct: 2 GTVKITSWNVAHL----ERLTRAHPTAKERRRRDAVVREIRELAPDILCLLEGPAGEAGI 57 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV--------------LQQS 127 + + + + + + D VR+ + + Sbjct: 58 DLVANDLLDGEWVAVKAAD-GNYATRGDQWIWFLVRQDLAARASLLPVGTWDAFAGVSWT 116 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS-- 185 L G + R L+++ NG ++ + +HLKS + Sbjct: 117 CHLWGEFTEGTHRHYRHPQVLILDWNGLRVEFIGLHLKSKFINQGERLWRDERERFIREA 176 Query: 186 --------QQAQWLKDWITQKKES--LVPFVIAGDFNRKINYL--GNNDDFWKTIDPNDS 233 +A ++ +I K + GDFN F+ I Sbjct: 177 LTARIKMATEAANVRAYIDAKFRQVGNPALFVLGDFNDGPGKEYFEEQYLFFDLIANIQG 236 Query: 234 LIRFP---------KEKDSRCNANKNLRNKIP-------IDYFVMDQNAYKFLIQESFSE 277 + D C + P +D+ + Q + Sbjct: 237 NVFATSRFLNHGLFDIPDELCWTVRFRDFVQPDRRPEILLDHILFTQGLVNGSLPWQVKP 296 Query: 278 ILYNEDD--------IKSRGKRLSDHCPISI 300 + + + SDH P+S+ Sbjct: 297 HAGKVEHEVHELANAGLPKDSQTSDHRPVSL 327 >gi|312864007|ref|ZP_07724243.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus vestibularis F0396] gi|311100420|gb|EFQ58627.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus vestibularis F0396] Length = 271 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 38/284 (13%), Positives = 75/284 (26%), Gaps = 54/284 (19%) Query: 48 KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST------------ 95 + + L++ DI+ QE+ A V + S Sbjct: 14 EDAEGKFQTLKEQILKAQYDIICFQEVNQEIETAAVETDAYYHALPSATPIHQDHFVRLL 73 Query: 96 ----------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + ++ +AV + + L+ D + RR Sbjct: 74 VEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTSSE--ILVSDVDDPTDYHTRRV 131 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++G+++ V +HL + E + + P Sbjct: 132 AVAETAVDGREVAVASVHLSWWDKGFQEEWARIEG----------------RFQSIGKPL 175 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYF 260 ++AGDFN G + DS + S + K + IDY Sbjct: 176 ILAGDFNNPAGREGYQAILASPLTLQDSFQVAQETNGSYTVGPGIDGWKGNEEPLRIDYV 235 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 Q ++ + + +SDH + + F Sbjct: 236 FASQE---------WAVNHLSVIFDGNNQPLVSDHYGLEAELTF 270 >gi|212694729|ref|ZP_03302857.1| hypothetical protein BACDOR_04261 [Bacteroides dorei DSM 17855] gi|212662708|gb|EEB23282.1| hypothetical protein BACDOR_04261 [Bacteroides dorei DSM 17855] Length = 334 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 36/255 (14%), Positives = 76/255 (29%), Gaps = 42/255 (16%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + +++LV WN + + L IV LQE N Sbjct: 91 PDSNQLKLVCWNAEGFRLNKDT-------------LAKAAHSIRILQPGIVCLQERPHTN 137 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 +A W + + +S D +AV + Q Y + + Sbjct: 138 LLA-------WDTIQAAFPDYPYCIINSREDEILNLAVFSRWPVGNVQEYYFPDSYNKM- 189 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-----PSCSLLSQQAQWLKD 193 ++ + + G+ + ++HL++ +S ++QA L + Sbjct: 190 -------LQADIRMIGQTFRLFNVHLQTTGMNESSSMKDRLQTMRHHAIRRNRQADLLAN 242 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 I + S P ++ GDFN +++ + + + + Sbjct: 243 AIAE---SPYPVIVCGDFNDIPASYVYRK-ISRSLQDCFLQAGRTWK-----GSYQRWGD 293 Query: 254 KIPIDYFVMDQNAYK 268 + IDY + Sbjct: 294 FLRIDYTLCSPAFQV 308 >gi|115389660|ref|XP_001212335.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|121740235|sp|Q0CT27|CCR4_ASPTN RecName: Full=Glucose-repressible alcohol dehydrogenase transcriptional effector; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase gi|114194731|gb|EAU36431.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 677 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 44/368 (11%), Positives = 102/368 (27%), Gaps = 78/368 (21%) Query: 11 FFLVPCTASVAQKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 + ++ T+S +KV ++S N S + L+ ++ D+DI Sbjct: 295 WVILDDTSSSTEKVTVLSHNALCDSSATSSHFGYTPSRALSWEFRRELILSELRSHDSDI 354 Query: 69 VFLQEMG----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 V LQE+ + ++ + +++ R + + ++ N A + +L Sbjct: 355 VCLQEVDQGSYNGFFREQLAYNDYKGVYWPRGRAMGMQEEEAKNVDGCATFFKGSKFILL 414 Query: 125 QQSYPLLGAK-----------DSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCF 169 + G D ++R + + ++V + G + V++ HL + Sbjct: 415 DKQMINFGQTAVRRPDAKGQDDIYNRLWQKDHIAVVVFLENRLTGSRFIVVNAHL---YW 471 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV-------------------------- 203 + ++ ++L ++ L D + Sbjct: 472 DPAFKDVKLIQTAILMEEITKLSDGYAKWPPCTDKTAFRFSEAEGGGESENQPEPAPSME 531 Query: 204 -------PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEK 241 P + GDFN N + + F + Sbjct: 532 YASGDQIPLFMCGDFNSSPGSAAYNLIANGRLTEEHPDLEKRLYGNLSRVGMTHPFKLKS 591 Query: 242 DSR-----CNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 N K +DY + + + + SDH Sbjct: 592 AYGSIGELSFTNYTPDFKDILDYIWYTSNTLHVSALLGEVDKDYLQKVPGFPNFHFPSDH 651 Query: 296 CPISIDYD 303 + ++ Sbjct: 652 IALFAEFS 659 >gi|290986733|ref|XP_002676078.1| predicted protein [Naegleria gruberi] gi|284089678|gb|EFC43334.1| predicted protein [Naegleria gruberi] Length = 340 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 92/318 (28%), Gaps = 66/318 (20%) Query: 11 FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 F + + ++ + +SWN+N +S R +Y + + + + Sbjct: 62 FLGTNNSYELNKQFKFISWNVNGISAVF----------RKEPNYLKM--LVEKEEPTCLC 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 LQE V K+ + R + TA V K +VL + Sbjct: 110 LQETKLSEDV-KLSEMAQYKFKNYIGHFNTSRARKGYSG--TACFVLKHGPKVLNVKF-- 164 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G R + + + ++++ + + S +N Sbjct: 165 -GIGKDKHDLEGR-----TITVEYEDFYLVNTYCPN-----SGQNLDRLEYRTKEWDVDL 213 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF------WKTIDPNDSLIRFPKEKDSR 244 LK + +K E P + GD N I+ + +D T++ S K Sbjct: 214 LKYF--EKLEKKKPIIWGGDLNVAISEMDIHDPLTLSKSPGFTLEERQSSPLVTKASPPF 271 Query: 245 CNA----------NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 ++ IDYFV + ++ E + Sbjct: 272 IDSFRYKNPYKKQYTYYGYINDMRLQKKGWRIDYFVCSNSLKDKIVNSYILEEYF----- 326 Query: 286 KSRGKRLSDHCPISIDYD 303 SDH PI + + Sbjct: 327 ------GSDHLPIGLIIN 338 >gi|225431130|ref|XP_002265926.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 625 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 41/345 (11%), Positives = 99/345 (28%), Gaps = 79/345 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++V++N+N L + + L ++ +LDADI+ +QE + + A Sbjct: 1 MKIVTYNVNGLRPRIS-------------QFGSLLKFLSSLDADIICVQETKLSRHELTA 47 Query: 82 KVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS--YPLLGAK 134 V + + F+S ++ + +S + + +A + + + + + LL Sbjct: 48 DVVMADGYESFFSCTRTNSKGRVGYSGVATFCRVKSAFSSTEVALPIAAEEGFTGLLEKS 107 Query: 135 DSFSRAGNRRAVELL----------VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 F + V+ ++++ + ++ H F S + Sbjct: 108 GGFGTGKDEIPVKAEGLEEFAKDELLKVDSEGRCIITDHGHFVLFNIYGPRADSEDTERI 167 Query: 185 SQ---QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------------NDDFWKTI- 228 Q L+ ++ + GD N + F + Sbjct: 168 QFKHTFFQILQKRWETLQQQGRRIFVVGDLNIAPAAIDRCDAGPDFEKNEFRRWFRSMLV 227 Query: 229 ------DPNDSLIRFPKEKDSRCNANKN----LRNKIPIDYFVMDQN------AYKFLIQ 272 + + C ++ ID+ + + + I Sbjct: 228 ECGGPFFDVFRAKHPDRREAYTCWSSSTGAEEFNYGSRIDHILSSGSCLHQDHCLQDRIF 287 Query: 273 ESFSEILYNEDDIKSRGK---------------RLSDHCPISIDY 302 + + R K SDH P+ + Sbjct: 288 VTCHVKECDILTQFKRWKPGNKPRWKGGRSIKLEGSDHAPVFMSL 332 >gi|189345695|ref|YP_001942224.1| exodeoxyribonuclease III Xth [Chlorobium limicola DSM 245] gi|189339842|gb|ACD89245.1| exodeoxyribonuclease III Xth [Chlorobium limicola DSM 245] Length = 258 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 29/304 (9%), Positives = 73/304 (24%), Gaps = 75/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWNIN + L + DI+ LQE+ ++ Sbjct: 1 MKIASWNING----------------IRARNASLEAWILRNQPDILLLQEVKAHE----- 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + + ++ + ++ + + D +R G Sbjct: 40 --EDIPPAISDLDAYRKFWNGSTVRKGYSGTGILLRDSCKVDDVVWEVPDFDIENRTGV- 96 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ ++ ++ + + + L+ +I +S Sbjct: 97 --------LHTTHFTLIGTYVPRGESDEHY--------RIKLDYLESLRRYICSLLDSGR 140 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++AGD N + + Sbjct: 141 QVILAGDMNIAHRDIDVHRSQNKPGAVGLRPEERAAIDAQIASGLQDIMRSMHPDAADLF 200 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ID F + + S ++ SDH P+ Sbjct: 201 TWWPYWKPARERNLGWRIDCFYLSSELAAKVTVASV-----------DLEEKSSDHAPVI 249 Query: 300 IDYD 303 ++ Sbjct: 250 LELS 253 >gi|300118993|ref|ZP_07056704.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus SJ1] gi|298723609|gb|EFI64340.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus SJ1] Length = 263 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 75/269 (27%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 18 EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ V + ++ + KD+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWK-TRKIVSATITYNGKNITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKDQVNRLMERVD----SNELSFLMGDFNNNARLQG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ K+ + + ID + +++ + Sbjct: 183 EGYEYMMQKGLYDTYELAIKKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKIRSSKVV 242 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ +SDH + + D Sbjct: 243 FNGTNRKV---------ISDHFGVEVQVD 262 >gi|302550838|ref|ZP_07303180.1| endonuclease/exonuclease/phosphatase [Streptomyces viridochromogenes DSM 40736] gi|302468456|gb|EFL31549.1| endonuclease/exonuclease/phosphatase [Streptomyces viridochromogenes DSM 40736] Length = 253 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 40/294 (13%), Positives = 70/294 (23%), Gaps = 57/294 (19%) Query: 13 LVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 L+P + + +R++S+NI D L + K + D+V Sbjct: 3 LLPNSRTEPDGSAVIRVLSYNIR----------------SMRDDTAALARVIKACEPDLV 46 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-VLQQSY 128 +QE + K + + T A+ V + Sbjct: 47 LVQEAPRFFRWRKKLARLARAADLVIV---------TGGATTTGPAILSSLRAGVERTED 97 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 LL R R +V G ++ VL HL S +Q Sbjct: 98 ILLPPTPGLHR---RGFATAVVRFAGTRLGVLSCHL-------------SLQKDERYEQG 141 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 L D + + GD N + + + Sbjct: 142 GMLLDRLAGMGVEHA--IAGGDLNERPDGRTFRRL------AGSLTDCRVAAPWGGEHTW 193 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID + D+ + +DH P+ Sbjct: 194 TPSDPYQRIDAIFVTGGIEVLGCGVPVGHPGVTGTDL----RAATDHLPVLAAL 243 >gi|148993303|ref|ZP_01822843.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP9-BS68] gi|148998707|ref|ZP_01826145.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP11-BS70] gi|149006502|ref|ZP_01830201.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP18-BS74] gi|168487344|ref|ZP_02711852.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC1087-00] gi|168489877|ref|ZP_02714076.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP195] gi|168491840|ref|ZP_02715983.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC0288-04] gi|168574966|ref|ZP_02720929.1| exodeoxyribonuclease III [Streptococcus pneumoniae MLV-016] gi|182684788|ref|YP_001836535.1| exodeoxyribonuclease [Streptococcus pneumoniae CGSP14] gi|221232582|ref|YP_002511736.1| exodeoxyribonuclease [Streptococcus pneumoniae ATCC 700669] gi|225855280|ref|YP_002736792.1| exodeoxyribonuclease III [Streptococcus pneumoniae JJA] gi|303254644|ref|ZP_07340746.1| exodeoxyribonuclease [Streptococcus pneumoniae BS455] gi|307068457|ref|YP_003877423.1| exonuclease III [Streptococcus pneumoniae AP200] gi|307128039|ref|YP_003880070.1| exodeoxyribonuclease III [Streptococcus pneumoniae 670-6B] gi|147755401|gb|EDK62450.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP11-BS70] gi|147761800|gb|EDK68763.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP18-BS74] gi|147928070|gb|EDK79089.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP9-BS68] gi|182630122|gb|ACB91070.1| exodeoxyribonuclease [Streptococcus pneumoniae CGSP14] gi|183569805|gb|EDT90333.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC1087-00] gi|183571693|gb|EDT92221.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP195] gi|183573869|gb|EDT94397.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC0288-04] gi|183578942|gb|EDT99470.1| exodeoxyribonuclease III [Streptococcus pneumoniae MLV-016] gi|220675044|emb|CAR69622.1| exodeoxyribonuclease [Streptococcus pneumoniae ATCC 700669] gi|225724139|gb|ACO19992.1| exodeoxyribonuclease III [Streptococcus pneumoniae JJA] gi|301794808|emb|CBW37264.1| exodeoxyribonuclease [Streptococcus pneumoniae INV104] gi|301802537|emb|CBW35298.1| exodeoxyribonuclease [Streptococcus pneumoniae INV200] gi|302598356|gb|EFL65400.1| exodeoxyribonuclease [Streptococcus pneumoniae BS455] gi|306409994|gb|ADM85421.1| Exonuclease III [Streptococcus pneumoniae AP200] gi|306485101|gb|ADM91970.1| exodeoxyribonuclease III [Streptococcus pneumoniae 670-6B] gi|332072666|gb|EGI83149.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17570] gi|332072995|gb|EGI83476.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17545] gi|332199864|gb|EGJ13939.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA41317] gi|332201253|gb|EGJ15324.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47901] Length = 275 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 77/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K S+P +GA S R Sbjct: 55 KHVEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDLEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +V ++ + ++ L + Sbjct: 114 I-----ITLEFDAFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAEL--------DKEK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 VLEID 274 >gi|325960168|ref|YP_004291634.1| exodeoxyribonuclease iii Xth [Methanobacterium sp. AL-21] gi|325331600|gb|ADZ10662.1| exodeoxyribonuclease III Xth [Methanobacterium sp. AL-21] Length = 257 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 77/305 (25%), Gaps = 77/305 (25%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNA 79 K+R++SWN+N + + N DI+ +QE + Sbjct: 2 DKIRILSWNVNGIRAVHKKGF---------------LDWFNNEKPDILCIQETKAVRKQF 46 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + + ++ S +S + L+ G Sbjct: 47 PPDIRAVDGYQLYVSEASRKGYSGTATYTS--------------LKPEGVKYGFGVEKFD 92 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + + + +I+ + + + A LKD Sbjct: 93 TEGR-----TLITDYGDFVLFNIYFPNGKMSKERLDYKMEFYDTFLEYADELKD------ 141 Query: 200 ESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDS 243 V+ GD N K +D ++ Sbjct: 142 -QGKNIVVCGDVNTAHREIDLAHPKENSKISGFLPEERAWIDKLLDHGYVDTFREFNQEP 200 Query: 244 RCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + R + +DYF ++++ K + SDHC Sbjct: 201 EEYTWWSYRTRARERNVGWRLDYFFVNRDFMKNVSAA-----------YILPEVMGSDHC 249 Query: 297 PISID 301 P+ ID Sbjct: 250 PVGID 254 >gi|301156521|emb|CBW15992.1| unnamed protein product [Haemophilus parainfluenzae T3T1] Length = 263 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 39/297 (13%), Positives = 82/297 (27%), Gaps = 54/297 (18%) Query: 24 VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++L++ N++ L +L D DI+ LQE+ + Sbjct: 1 MKLLTLNVHAWLEAN------------QAEKIEILADTIVEKDYDIIALQEVNQLMSAPA 48 Query: 83 VFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 + P + L + + IA + ++ Sbjct: 49 ISPTLKQDNYGVILLNKINQRVAQKYSLFWSNSHIGYDKYDEGIAFLTRLPVYDVDAF-Y 107 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 +R+ + L VE G+ I H+ + Sbjct: 108 CSQHQRLDSILSRKIIGLTVEYQGQLIECYSCHINLPNCDGENQLDN------------- 154 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC----- 245 +I ++ +S ++ GDFN K++ D+ ++ Sbjct: 155 -VRYIVERSQSANLKILMGDFNTDAISDQKAYQQIKSLGLFDTFEMAEQKDSGITVEKAI 213 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + K + +DY ++Q Q F+ +SDH + +D Sbjct: 214 DGWKGHSQEKRLDYIFLNQAKRVLSNQVIFNGKNKPI---------VSDHFGVEVDL 261 >gi|209558893|ref|YP_002285365.1| Putative 3-exo-deoxyribonuclease [Streptococcus pyogenes NZ131] gi|209540094|gb|ACI60670.1| Putative 3-exo-deoxyribonuclease [Streptococcus pyogenes NZ131] Length = 303 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 37/327 (11%), Positives = 89/327 (27%), Gaps = 57/327 (17%) Query: 3 RKYVLALVFFLVPCTASVA-QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 + +++ + + +++L+SWNI++L+ + + R + Sbjct: 7 KSLIVSFFVTITTRLSVRKRNQMKLISWNIDSLNAALTGESPRALLSR------AVLDTL 60 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 DADI+ +QE ++ + S + + KN Sbjct: 61 VAQDADIIAIQETKLSAKGPSKKHIEALLSYFPNYLHVWRSSVEPARKGYAGTMFLYKNT 120 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 ++P +GA + G ++ + + +V ++ + + Sbjct: 121 LNPVITFPEIGAPTTMDAEGR------IITLEFEDFFVTQVYTPNAGDGLRRLDDRQIWD 174 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWK 226 + L ++ P + GD+N R + + Sbjct: 175 HKYADYLTEL--------DAQKPVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERQGFT 226 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFS 276 + F + + IDY++ + + Sbjct: 227 NLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGWRIDYWLASNRIVDKVKRSEMI 286 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303 + DH PI +D D Sbjct: 287 SSGERQ-----------DHTPILLDID 302 >gi|296236749|ref|XP_002763464.1| PREDICTED: deoxyribonuclease-1-like 1-like [Callithrix jacchus] gi|167045821|gb|ABZ10489.1| deoxyribonuclease I-like 1 precursor (predicted) [Callithrix jacchus] Length = 302 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 36/299 (12%), Positives = 77/299 (25%), Gaps = 36/299 (12%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 AL+F ++ AQ R+ ++N L+ + L + D Sbjct: 6 ALLFLILAN---EAQAFRICAFNAQRLTL---------AKVAREQVMDTLVRILARC--D 51 Query: 68 IVFLQEM-GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 I LQE+ S + + + S S + + ++ + Sbjct: 52 ISVLQEVVDSSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVL 111 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSCSL 183 S+ + KD R + K + ++ +H L Y + Sbjct: 112 SFYVYNDKD---DLFAREPFVAQFSLPSKVLPSLVLVPLHTTPKAVEKELNALYHVFLEV 168 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 ++ GDFN L + + + Sbjct: 169 SQHW-------------QTKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADGED 215 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 I + + L + + + + +SDH P+ ++ Sbjct: 216 TTVRASTHCTYDRI--VLHGERCQSLLHTAAAFDFPTSFQLTEEEALNISDHYPVEVEL 272 >gi|145351707|ref|XP_001420209.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580442|gb|ABO98502.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 349 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 53/355 (14%), Positives = 96/355 (27%), Gaps = 76/355 (21%) Query: 14 VPCTASVAQKVRLVSWNI-------------NTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 + + S A+ +++ +N E + + + T L + Sbjct: 1 MTTSTSGARTIQVCQYNALADALALNDAFASAYYGEDDAEANEEMYDLNWTKRSKDLLRA 60 Query: 61 AKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + D D++ +QE Y + K E + ++ I Sbjct: 61 ITSNDSTTAPDVICMQECDHYYDFFEPELKKLGYAGLYKEDQWSPCRKFGAPCDGVCIFY 120 Query: 117 RKKNVRVLQQSYPLLG---------------------AKDSFSRAGNRRAVELLVEINGK 155 + + +L P KD S +G R A+ L+ N K Sbjct: 121 KTDKLELLSSHAPGTPRARKDDPALNAGKTLMARFRLKKDPRSESGIRNAIGTLIRGNAK 180 Query: 156 K---------IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE------ 200 I V+ HL+S +D + +Q + L + Sbjct: 181 PVFSGEDLQEIVVVTTHLESAKTVDGII--------TRLEQTKELCRHLNAFATSLCADV 232 Query: 201 SLVPFVIAGDFNRKINYL-----------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 V +IAGD N N +D + +S + K Sbjct: 233 DKVQIIIAGDLNATPNEACVVHLRGRGMRNAYEDMSAALGDKNSNRFSTWKTR--TGLFK 290 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQES--FSEILYNEDDIKSRGKRLSDHCPISIDY 302 K IDY + + ++ + E D SDH P+ Sbjct: 291 TGEVKHTIDYILYSAHRGSKVVSVAKLPDESEIPSDVGLPTFGFPSDHLPLQARI 345 >gi|298386065|ref|ZP_06995622.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 1_1_14] gi|298261293|gb|EFI04160.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 1_1_14] Length = 361 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 85/302 (28%), Gaps = 67/302 (22%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++ +S+N+ + E + Y + +ADI+ LQE S Sbjct: 99 GSIKFLSYNVMGFNNLEKKEGKNP-----------ILSYLADSEADIICLQEYNSTKNKK 147 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + ++ + H + + +A K + + + + Sbjct: 148 YLTDEDIRKALKAYPYRSIH----NPERGGSQLACFSKFPILSARPIKYESTYNGSMQY- 202 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSL-----------------------ENTYS 178 +++N I +++ HL+S + Sbjct: 203 -------TLKVNEDTITLINNHLESNKLTKEDKVIYEDMIKDPNAKKVKTGLRQLIKKLA 255 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + ++ S QA + I K + GDFN + + + +D F Sbjct: 256 EASAIRSSQADSVAVAIANSKYPT--IITCGDFNDA-SISYTHRILTQQLDD-----AFT 307 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + ID ++ N + + + + SDH PI Sbjct: 308 QSGRGLGISYNLNKFYFRIDNILISPN--QKAYNCTVDRSIKD-----------SDHYPI 354 Query: 299 SI 300 Sbjct: 355 WC 356 >gi|297735011|emb|CBI17373.3| unnamed protein product [Vitis vinifera] Length = 400 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 41/345 (11%), Positives = 99/345 (28%), Gaps = 79/345 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++V++N+N L + + L ++ +LDADI+ +QE + + A Sbjct: 1 MKIVTYNVNGLRPRIS-------------QFGSLLKFLSSLDADIICVQETKLSRHELTA 47 Query: 82 KVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS--YPLLGAK 134 V + + F+S ++ + +S + + +A + + + + + LL Sbjct: 48 DVVMADGYESFFSCTRTNSKGRVGYSGVATFCRVKSAFSSTEVALPIAAEEGFTGLLEKS 107 Query: 135 DSFSRAGNRRAVELL----------VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 F + V+ ++++ + ++ H F S + Sbjct: 108 GGFGTGKDEIPVKAEGLEEFAKDELLKVDSEGRCIITDHGHFVLFNIYGPRADSEDTERI 167 Query: 185 SQ---QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------------NDDFWKTI- 228 Q L+ ++ + GD N + F + Sbjct: 168 QFKHTFFQILQKRWETLQQQGRRIFVVGDLNIAPAAIDRCDAGPDFEKNEFRRWFRSMLV 227 Query: 229 ------DPNDSLIRFPKEKDSRCNANKN----LRNKIPIDYFVMDQN------AYKFLIQ 272 + + C ++ ID+ + + + I Sbjct: 228 ECGGPFFDVFRAKHPDRREAYTCWSSSTGAEEFNYGSRIDHILSSGSCLHQDHCLQDRIF 287 Query: 273 ESFSEILYNEDDIKSRGK---------------RLSDHCPISIDY 302 + + R K SDH P+ + Sbjct: 288 VTCHVKECDILTQFKRWKPGNKPRWKGGRSIKLEGSDHAPVFMSL 332 >gi|221112376|ref|XP_002160726.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 511 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 43/343 (12%), Positives = 90/343 (26%), Gaps = 94/343 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81 +++++WNIN R TS L +L+ADI+ LQE + Sbjct: 1 MKILTWNING--------------IRATSRNHSLGNLLDSLEADIICLQETKITRNLLTD 46 Query: 82 KVFPKNTWCIFYS-TERLINHSKRDSNND---------IHTAIAVRKKNVRVLQQSYPLL 131 + + F+S ++R +S + K +V+ Sbjct: 47 HLANVEGYYAFFSFSKRKTGYSGVATFCKKTLCPIAAEEGLTGLFTSKMEQVVGFYNNPP 106 Query: 132 GAKDSFSR---AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 D R + R + V +G+++ +++++ + Sbjct: 107 EYSDELLRSLDSEGRCMITEHVTSDGQRLCIINVYCP------RADVEEKERFHYKMCFY 160 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD------------------------- 223 + L+ I ++ GD N + + D Sbjct: 161 RLLQMRIISLMREKRNIIVVGDLNVSHKRIDSCDPCEICIQIFFFKVELLAVDAVVDLTV 220 Query: 224 -------------------FWKTIDPNDSLIRFPKEKDSRCNANKNL----RNKIPIDYF 260 + + ++ C + ID+ Sbjct: 221 DKISEHIQIKGSESFSEKNVNNFLVDTFRIFHPNEQNAYTCWNTQTRARETNFGTRIDFI 280 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + D L + SDHCP+ D++ Sbjct: 281 LADHQLCTVLTNCVIL-----------ADVQGSDHCPVVADFN 312 >gi|213512198|ref|NP_001135227.1| DNA-(apurinic or apyrimidinic site) lyase [Salmo salar] gi|197631957|gb|ACH70702.1| APEX nuclease 1 [Salmo salar] gi|209154634|gb|ACI33549.1| DNA-apurinic or apyrimidinic site lyase [Salmo salar] gi|209154684|gb|ACI33574.1| DNA-apurinic or apyrimidinic site lyase [Salmo salar] Length = 312 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 75/304 (24%), Gaps = 73/304 (24%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +++ SWN++ L + ++ D++ LQE Sbjct: 54 AANMKITSWNVDGLRAWVKKKG---------------LDWVRDEAPDVLCLQE---TKCA 95 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K P + E + + ++ +A+ K + G Sbjct: 96 EKSLPDEITSM---PEFPHKYWAGSDEKEGYSGVAMLCKTEPLKVT----YGIGKEEHDK 148 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R ++ +++ ++ + + L + Sbjct: 149 EGR-----VITAEFPTFFLVTAYVPNSGRGLVRLDYRKTWDVEFKAYLSDL--------D 195 Query: 201 SLVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245 P V+ GD N + + + + F + + Sbjct: 196 KRKPLVLCGDLNVAHEEIDLKNSKGNKKNAGFTAEEREGFNQLLAAGFTDSFRELYPEQA 255 Query: 246 NANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 NA +DYFV+ L SDHC Sbjct: 256 NAYTFWTYMMNSRSKNVGWRLDYFVLSSALLPGLCDSKIR-----------NQAMGSDHC 304 Query: 297 PISI 300 PI++ Sbjct: 305 PITL 308 >gi|71902993|ref|YP_279796.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS6180] gi|71802088|gb|AAX71441.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS6180] Length = 303 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 38/327 (11%), Positives = 90/327 (27%), Gaps = 57/327 (17%) Query: 3 RKYVLALVFFLVPCTASVA-QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 + +++ + + +++L+SWNI++L+ + + R + Sbjct: 7 KSLIVSFFVTITTRLSVRKRNQMKLISWNIDSLNAALTGESPRALLSR------AVLDTL 60 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 DADI+ +QE T ++ + S + + KN Sbjct: 61 VAQDADIIAIQETKLSAKGPTKKHIETLLSYFPNYLHVWRSSVEPARKGYAGTMFLYKNT 120 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 ++P +GA + G ++ + + +V ++ + + Sbjct: 121 LNPVITFPEIGAPTTMDAEGR------IITLEFEDFFVTQVYTPNAGDGLRRLDDRQIWD 174 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWK 226 + L ++ P + GD+N R + + Sbjct: 175 HKYADYLTEL--------DAQKPVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERQGFT 226 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFS 276 + F + + IDY++ + + Sbjct: 227 NLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGWRIDYWLASNRIVDKVKRSEMI 286 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303 + DH PI +D D Sbjct: 287 SSGERQ-----------DHTPILLDID 302 >gi|148228766|ref|NP_001090620.1| deoxyribonuclease I-like 1 [Xenopus laevis] gi|120538429|gb|AAI29561.1| LOC100036866 protein [Xenopus laevis] Length = 297 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 38/295 (12%), Positives = 78/295 (26%), Gaps = 33/295 (11%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 +VPC + ++ ++N+ E L+ + + + I LQ Sbjct: 1 MVPCVCAT----KICAFNMQHFGE---------KKVAKEHILNLIVKIIQRCE--ISVLQ 45 Query: 73 EMGSYN--AVAKVFPKNTWCIFYSTER--LINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 E+ A++++ T R S + + R V+ QQ Sbjct: 46 EVQDPKGLALSRLLQSLNKAHKKDTFMAVTSPPLGRKSYTEQYV-FIYRSDKVQATQQYK 104 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 D+ R + + GK + L + N +L Sbjct: 105 YADDDSDA-PDVFAREPYIVRFSVFGKGLRDLVLVPMHTVPE----NASREIDALYDVFL 159 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + W + GDFN +YL + ++ + Sbjct: 160 DIMVRW------DAKNILFLGDFNAACSYLSRKKKRTLRLYKDERFHWLIDDSADTTVRG 213 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 I + + + + +SDH P+ +D + Sbjct: 214 STNCAYDRI--VAYGEQLMTNVQTAGVYNFTKELGLSEIQALEISDHYPVELDLN 266 >gi|104782141|ref|YP_608639.1| DNase [Pseudomonas entomophila L48] gi|95111128|emb|CAK15848.1| putative DNase with DNase I-like domain [Pseudomonas entomophila L48] Length = 255 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 78/291 (26%), Gaps = 56/291 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---- 74 + +++ +++ N++ LR+ + AD+VFLQE+ Sbjct: 14 TQVRRLTVMTLNVHKGFTPFNRRF----------ILPELREAVRATGADLVFLQEVHGSH 63 Query: 75 GSYNAVAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + + +P+ F + + + A+ K + + Sbjct: 64 QRHASRHPGWPEAPQYEFLADSMWPQFAYGRNAVYPHGDHGNALLSKFPIRDHVNLDVSV 123 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + R + +++ V I + D + +LL Sbjct: 124 HGN-----EERGLLHCELDVPDHG-PVHAICVHLGLREDHRQRQVGLLLALLDN------ 171 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 P ++AGDFN W+ + + + Sbjct: 172 ------LPPDEPVIVAGDFND-----------WRLKADARLSGHLLEAFGTPPRSFPARL 214 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +D + + S + LSDH P+ + Sbjct: 215 PLLRLDRIYLRNACAEQARVLS-----------RYPWTHLSDHAPLVAEVT 254 >gi|229495328|ref|ZP_04389063.1| AP endonuclease domain protein [Porphyromonas endodontalis ATCC 35406] gi|229317771|gb|EEN83669.1| AP endonuclease domain protein [Porphyromonas endodontalis ATCC 35406] Length = 402 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 41/331 (12%), Positives = 93/331 (28%), Gaps = 74/331 (22%) Query: 3 RKYVLALVFFLVP-------------CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKR 49 R ++ + + + V+++S N + ++ + N R Sbjct: 108 RGFIFNFLLLALSWWSIRSYIPLHPTPSVIPPHAVKVLSLNCQAFAYEKHTADKPNPTLR 167 Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 Y K+ ADIV LQE + + + + Sbjct: 168 ----------YIKDSHADIVCLQEAAIMRDDSPYVSAKKITEYLPEYPYVVTRYAQGDRG 217 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 T++ + K + PL + + +++ G+++ V ++HL+SF Sbjct: 218 --TSLMLLSKFPVRNTRMLPLESTFN--------GGIAYTLDVAGRELTVFNLHLESFRL 267 Query: 170 LDSLENTYSPSCSL--------------------LSQQAQWLKDWITQKKESLVPFVIAG 209 Y+ ++QA + + E ++ G Sbjct: 268 TTEDGTRYARLAREIEAVALKEQMEQKLGPAFLKRAKQADRV--HVEIIHEKTPYILVCG 325 Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269 DFN + + + + + R ID+ + + + Sbjct: 326 DFNDTPISYAHQRI------ASGLIDAYASTGCGTGYSFTFKRLGFRIDHILHSRRVKSY 379 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + +SDH P+S Sbjct: 380 -------------NCKVDKSATISDHKPLSC 397 >gi|332522573|ref|ZP_08398825.1| exodeoxyribonuclease III [Streptococcus porcinus str. Jelinkova 176] gi|332313837|gb|EGJ26822.1| exodeoxyribonuclease III [Streptococcus porcinus str. Jelinkova 176] Length = 275 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 84/305 (27%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + R + + DADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTGESPRALLSR------AVIDRLVSEDADIIAIQETKLSATGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + S + + K ++P +GA + G Sbjct: 55 KHLESILNYFPNYLHVWRSSVEPARKGYAGTMFLYKQTLNPVVTFPEIGAPTTMDSEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V ++ + ++ L ++ Sbjct: 114 -----IITLEFDDFFVTQVYTPNAGDGLRRLADRQEWDIKYAEYLAQL--------DAQK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F N Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTALLEKGFTDTFRHLHGDIPNVY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ +++ + + DH PI Sbjct: 221 TWWAQRSKTSKMNNTGWRIDYWLTSNRVADKVLKSEMLDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 LLEID 274 >gi|294508891|ref|YP_003572950.1| endonuclease/exonuclease/phosphatase family [Salinibacter ruber M8] gi|294345220|emb|CBH25998.1| endonuclease/exonuclease/phosphatase family [Salinibacter ruber M8] Length = 317 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 34/314 (10%), Positives = 77/314 (24%), Gaps = 77/314 (24%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + ++++N+ + G + + +D D+V LQE+ S + Sbjct: 42 PDSLTVMTYNVLYATPDTGT-----------------VRAIEAVDPDVVALQEI-SEPRL 83 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + + +S E N T + R Sbjct: 84 RHIADELDYYFHHSDEHEANE--------EDTGLLSRYPI------------------SR 117 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS--------PSCSLLSQQAQWLK 192 R L + ++ I + ++HL + + + S + + + Sbjct: 118 PTRYGALLYLTVDD-PIRIANVHLSPYPYEPYALRDDEMTPQEAVAQARKTRSPEIKPVL 176 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK----------- 241 D + + + VP + GDFN + + + Sbjct: 177 DALAKSVQEDVPTFLMGDFNEPSHLDWTPAAAEAGLHLGLEVPWPTSRAVTERGFRDAFR 236 Query: 242 ---------DSRCNANKNLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 ID+ + + + + D G Sbjct: 237 VAHPDEVKRPGYTWTTLTEDPDEVHDRIDFIYVAGASVSVETAYTVGLRDASPTDRSVSG 296 Query: 290 KRLSDHCPISIDYD 303 SDH + Sbjct: 297 Y-PSDHRSVVTTVS 309 >gi|225010201|ref|ZP_03700673.1| exodeoxyribonuclease III Xth [Flavobacteria bacterium MS024-3C] gi|225005680|gb|EEG43630.1| exodeoxyribonuclease III Xth [Flavobacteria bacterium MS024-3C] Length = 254 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 83/303 (27%), Gaps = 73/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+N+N + + + + D++ LQE ++ + Sbjct: 1 MKIISYNVNGIRAALKKGF---------------LDWLQGANPDVLCLQETKAHKDQLDL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + H + ++ +AV K + G + R Sbjct: 46 -------SLFEAAGYPYHYWFSAQKKGYSGVAVLCKTKPEDV----VYGTGIDYMDFEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + V G I ++ ++L S D+ KE+ Sbjct: 95 NLL---VRYPG--ISIMSMYLPSGT--------NQDRLDFKFNYMDDFLDYTKSLKETDP 141 Query: 204 PFVIAGDFNRKINYLGNNDDFWKT----IDPNDSLIRFPKEKDSRCNA----------NK 249 VI GD+N + +D P + + ++ Sbjct: 142 NLVICGDYNICHQAIDIHDPVRNKNISGFLPEERAWLSALLESGFTDSFRQINTAPDQYS 201 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +DY ++ + ++ + SDHCP+++ Sbjct: 202 WWSYRANSRANNKGWRLDYALVSKPLDTQILNAQILSAAVH-----------SDHCPVTV 250 Query: 301 DYD 303 + Sbjct: 251 EIS 253 >gi|54022898|ref|YP_117140.1| putative exonuclease [Nocardia farcinica IFM 10152] gi|54014406|dbj|BAD55776.1| putative exonuclease [Nocardia farcinica IFM 10152] Length = 259 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 29/270 (10%), Positives = 64/270 (23%), Gaps = 56/270 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + + +ADIV LQE + + V + + + + + Sbjct: 21 MLAWLAATEADIVCLQETRATDEQTAVALAPALADGWQ------LAHAEPGAKGRAGVGI 74 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + + D R +E + ++ V +++ S ++ Sbjct: 75 LSRRAPDAVRIGFGSSEFDGSGRY---------LEADFGEVTVASVYVHSGDAGTPRQDE 125 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK---------- 226 + + FV+ GD+N + Sbjct: 126 KYRFMTEFGAYLKA----------RTGDFVVCGDWNIAHTERDLKNWKGNRKSAGFLPEE 175 Query: 227 -----TIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQ 272 + + + IDY + Q Sbjct: 176 RAWIDELLAAGYVDVVRALHPDVDGPYSWWSYRGRAFDNDSGWRIDYHLARGELAGRAKQ 235 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + S +R SDH P+++ Y Sbjct: 236 A-------VVERAPSYDQRWSDHAPVTVQY 258 >gi|167383741|ref|XP_001736653.1| sphingomyelinase C precursor [Entamoeba dispar SAW760] gi|165900834|gb|EDR27066.1| sphingomyelinase C precursor, putative [Entamoeba dispar SAW760] Length = 320 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 36/314 (11%), Positives = 88/314 (28%), Gaps = 41/314 (13%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + +R++++N+ + + R + D DI+ QE+ Sbjct: 13 KPIRILTYNMYLRPMLISAAGHDHKDSRLKMFCKE-----RLKDFDIICFQEVFKELNWR 67 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + R+ + + + V + L Sbjct: 68 REKLLKKAKKAGFKYRIQTEKPLFPLFLCDAGLIIISRFPIVE-SQFKLYKRSIYADAVA 126 Query: 142 NRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-TQKK 199 ++ + +E+ + K + V + H ++ LD PS + Q + ++ + + Sbjct: 127 SKGVLYAKIELQSNKYLHVFNTHTQADYTLDPE--KAKPSRDVRLNQIRKYAKFVQKKCR 184 Query: 200 ESLVPFVIAGDFNRK-------INYLGNNDDFWK--TIDPNDSLIRF------------- 237 P + GDFN +F + D + + Sbjct: 185 NDTFPVICCGDFNVNGRAGTDGTTESPEYTEFLQNFHFDSGELIDLLLRDNHGIQPITFG 244 Query: 238 -----PKEKDSRCNANKNLR----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 ++ C+ +K +DY + + I + + + Sbjct: 245 DSFIDENGTETPCDTEITYEVSCMDKSRLDYMFHWKKPNENPIITCKNCHVDKFQVSGKK 304 Query: 289 GKRLSDHCPISIDY 302 +SDH ++ D Sbjct: 305 YPFMSDHFGVTCDI 318 >gi|114769839|ref|ZP_01447449.1| exodeoxyribonuclease III, putative [alpha proteobacterium HTCC2255] gi|114549544|gb|EAU52426.1| exodeoxyribonuclease III, putative [alpha proteobacterium HTCC2255] Length = 262 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 32/309 (10%), Positives = 76/309 (24%), Gaps = 77/309 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--V 80 +++ SWNIN + + D++ LQE S Sbjct: 2 PIKVCSWNIN----------------SVRLREDSVCRLLSEETPDVLCLQECKSPEDKIP 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + F K + S + +A+ + + Sbjct: 46 TEKFSKLGYKYLI-----------ASGQKGYNGVAILSRLPLKEIARRDFASLEH----- 89 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 A + V ++ K + + + ++ + D + + + ++ +K Sbjct: 90 ----ARHIAVNVDNK-LNIHNFYVPAG--GDIPDRNINEKFGQKLDYLSEMAEYFQSQKP 142 Query: 201 SLVPFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSR 244 ++ GD N D + + + + K+ S Sbjct: 143 QKS--ILVGDLNIAPGEEDVWDHKKLLKIVSHTPQEIQALNEVMLSANWVDIIRKDIPSG 200 Query: 245 CNANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + +D+ ++ ++ SD Sbjct: 201 L-LYSWWSYRARDWDTANKGRRLDHIWATKDIADKGYGSYI-------SRDVRGWEKPSD 252 Query: 295 HCPISIDYD 303 H PI +D Sbjct: 253 HAPIFSSFD 261 >gi|296225495|ref|XP_002758540.1| PREDICTED: 2',5'-phosphodiesterase 12 [Callithrix jacchus] Length = 608 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 36/319 (11%), Positives = 76/319 (23%), Gaps = 43/319 (13%) Query: 24 VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R VS+NI S L+++ +AD++ LQE+ Sbjct: 294 IRTVSYNILADTYAQTDFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDR 353 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKN------------VRV 123 + P R+ H + ++ + + Sbjct: 354 AVFSDSLVPALDAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFHEALESDPLHKEL 413 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L++ A++ + + V +L + + + Sbjct: 414 LEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVA 473 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPN 231 L ++ +P + GDFN + + D + Sbjct: 474 L-----AHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGNIPEDHEDWASNGEEER 528 Query: 232 DSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDI 285 ++ K N +DY +D + S Sbjct: 529 CNMSLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQA 588 Query: 286 KSRGKRLSDHCPISIDYDF 304 SDH + D + Sbjct: 589 LPSVSHPSDHIALVCDLKW 607 >gi|164688495|ref|ZP_02212523.1| hypothetical protein CLOBAR_02140 [Clostridium bartlettii DSM 16795] gi|164602908|gb|EDQ96373.1| hypothetical protein CLOBAR_02140 [Clostridium bartlettii DSM 16795] Length = 252 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 75/303 (24%), Gaps = 82/303 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N + + +DADI LQE Sbjct: 1 MKFISWNVNGIRACVTKGF---------------LDFFNEVDADIFCLQETKLQEG-QIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S + Sbjct: 45 LDLPGYHQYWNYAEKKGYSGTAIFTKQE---------PISVNYG---------------- 79 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KKES 201 + +E + K+ V+ + +F F+ L + +W D+ K S Sbjct: 80 ----IQIEEHDKEGRVITLEFDNFYFVTVYTPNSQSELKRLDYRMKWEDDFRKYLLKLNS 135 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD N + + + + + + + Sbjct: 136 KKGVIVCGDLNVAHKEIDLKNPKTNRKNAGFTDQEREKFTELLESGFIDTYRHFNPDKEG 195 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDYF ++ L+ + SDHCP Sbjct: 196 IYSWWSYRFKAREKNAGWRIDYFCASKDLENNLVSADIHTQIL-----------GSDHCP 244 Query: 298 ISI 300 I + Sbjct: 245 IEL 247 >gi|115497626|ref|NP_001069601.1| 2',5'-phosphodiesterase 12 [Bos taurus] gi|122132244|sp|Q08DF7|PDE12_BOVIN RecName: Full=2',5'-phosphodiesterase 12; Short=2'-PDE; Short=2-PDE gi|115304913|gb|AAI23773.1| Phosphodiesterase 12 [Bos taurus] gi|296474836|gb|DAA16951.1| 2',5'-phosphodiesterase 12 [Bos taurus] Length = 609 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 41/325 (12%), Positives = 81/325 (24%), Gaps = 55/325 (16%) Query: 24 VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R VS+NI S L+++ +AD++ LQE+ Sbjct: 295 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDR 354 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG---- 132 + P R+ H + + ++ ++ ++ Sbjct: 355 CVFTDSLMPALEAFGLEGVFRIKQHEGLATFYR-KSKFSLLSQHDIAFHEALQSDPLHKE 413 Query: 133 -------AKDSFSRAGNRRAVELL-----VEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + R R +V + + + KKI V + HL Sbjct: 414 LLEKLALYPSAQERVLQRSSVVQVSVLQSTKDSSKKICVANTHLYWHPKGG--------- 464 Query: 181 CSLLSQQAQ---WLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFW 225 + Q ++ +P + GDFN + + D Sbjct: 465 -YIRLIQMAVALAHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIAEDHEDWTS 523 Query: 226 KTIDPNDSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEIL 279 + ++ K N +DY +D + S Sbjct: 524 NGEEERCNMSLSHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLHALEVEQVIPLPSHEE 583 Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304 SDH + D + Sbjct: 584 VTTHQALPSVSHPSDHIALVCDLKW 608 >gi|257455440|ref|ZP_05620675.1| endonuclease/exonuclease/phosphatase [Enhydrobacter aerosaccus SK60] gi|257447402|gb|EEV22410.1| endonuclease/exonuclease/phosphatase [Enhydrobacter aerosaccus SK60] Length = 335 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 39/322 (12%), Positives = 91/322 (28%), Gaps = 48/322 (14%) Query: 22 QKVRLVSWNINTLSEQEGV---SLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + + + N+ + V + + K+ L + L ADI+ QE+ Sbjct: 3 NQFVIATANLLNFALPNRVFYRNQDVYTPKQYQQKINALAPIFRQLQADIIGCQEIWDEQ 62 Query: 79 AVAKVFPKNTWCIFYSTERLIN-------HSKRDSNNDIHTAIAVRKKNVRVLQQSYP-- 129 A+ + ++ T L + R + + R + + + Sbjct: 63 ALIDLCRAAGLNDYHVTVPLASNQPDSPLTQGRGAVGTPSVGLVSRFEIINTQLLTQMPA 122 Query: 130 ---LLGAKDSFSRAGNRRAVELLVEINGKKI-WVLDIHLKSFCF---------------- 169 L + NR + + + + V+ HLKS Sbjct: 123 IALLEVPDVGLYQQFNRPPLIADIRLPNGMLVTVIVAHLKSKRPEFLENAQGEPLEDRND 182 Query: 170 LDSLENTYSPSCSLLSQQAQWLKD-WITQKKESLVPFVIAGDFNRKINYLG--------- 219 S + + +A ++ I + + P ++ GD N + + Sbjct: 183 PLIRVRAKLRSLCMRAAEAAGIRQVVIEKLSHNNHPLILLGDMNDVMQSVTCQLLSESGE 242 Query: 220 ---NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY---KFLIQE 273 + + ++ + + +D ++ + KF I E Sbjct: 243 VFYDKSMRDIVLYDASTVQSRMHWLKDVAYTHIHQGMPEVLDQILVSEQFLADSKFNIGE 302 Query: 274 SFSEILYNEDDIKSRGKRLSDH 295 +N+ +R +DH Sbjct: 303 VLQVDYFNDHLKFIVEQRPTDH 324 >gi|325094515|gb|EGC47825.1| conserved hypothetical protein [Ajellomyces capsulatus H88] Length = 636 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 80/344 (23%), Gaps = 84/344 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 VRL +WN+N + W R + + L+ADIV QE + + Sbjct: 2 VRLTTWNVNGIRNPFSYHPW-----REKRSFEAM---FDALEADIVIFQETKIQRKDLQD 53 Query: 82 KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVR----------------VL 124 + N W F+S + +S +R + Sbjct: 54 DMVLVNGWDCFFSLPKYKKGYSGVVIYTRNSICCPIRAEEGITGILCLPTSGSNLSSPTS 113 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS-- 182 + P + A ++ + + + +F + Sbjct: 114 FRDLPEEAQIGGYPTAEQLALSDVDAATLDSEGRCMILEFPAFVLIGVYCPANRDETRDG 173 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------------YLGN 220 + L + ++ GD N + Sbjct: 174 FRTGFVNVLDARVRNLAAMGKRVIVTGDLNISGSQIDSARALEGIRKGTLTDSEFVSSPV 233 Query: 221 NDDFWKTIDPND-------------SLIRFPKEKDSRCNANKNL---------RNKIPID 258 F + +D + K R ID Sbjct: 234 RRIFNQLVDGGKVIGDRDDGRETPVLVDLCRKYHPDRLGMYTCWEQRVNARPGNYGARID 293 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 Y + D++ + + G SDHCP+ + Sbjct: 294 YVLCDRSMQDWFSASNIQ-----------EGLMGSDHCPVYAEL 326 >gi|297671025|ref|XP_002813650.1| PREDICTED: 2',5'-phosphodiesterase 12-like [Pongo abelii] Length = 608 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 36/319 (11%), Positives = 76/319 (23%), Gaps = 43/319 (13%) Query: 24 VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R VS+NI S L+++ +AD++ LQE+ Sbjct: 294 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDR 353 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKN------------VRV 123 + P R+ H + ++ + + Sbjct: 354 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFYEALESDPLHKEL 413 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L++ A++ + + V +L + + + Sbjct: 414 LEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVA 473 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPN 231 L ++ +P + GDFN + + D + Sbjct: 474 L-----AHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEER 528 Query: 232 DSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDI 285 ++ K N +DY +D + S Sbjct: 529 CNMSLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQA 588 Query: 286 KSRGKRLSDHCPISIDYDF 304 SDH + D + Sbjct: 589 LPSVSHPSDHIALVCDLKW 607 >gi|295099755|emb|CBK88844.1| exodeoxyribonuclease III [Eubacterium cylindroides T2-87] Length = 249 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 80/303 (26%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N + LDADI +QE + +V Sbjct: 1 MKLISWNVNGIRAVLNKGF---------------IDILNTLDADIFCIQETKAQPDQIEV 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + + + + K + + D+ R Sbjct: 46 DCDLYLYQYINSAQRKGY----------SGTMIFSKIEPLSVHYGIDIPEHDTEGR---- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V+ ++ + S Q L Sbjct: 92 -----VITLEFDSYYVVTVYTPNSGDGLKRLEYRMEWDKAFSNYIQSL----------DK 136 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P ++ GD N D F K + D + Sbjct: 137 PVLLTGDLNVANEEIDIKNPKTNRRNAGFTDEERDSFKKNLLTILKDSYRTLYPDKVEYS 196 Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + R K IDY+++ + + +Y SDHCP+ + Sbjct: 197 WWSYRFKAREKNAGWRIDYWLVSEELMPKVKDSKILTDIY-----------GSDHCPVQL 245 Query: 301 DYD 303 + + Sbjct: 246 EIE 248 >gi|240275156|gb|EER38671.1| conserved hypothetical protein [Ajellomyces capsulatus H143] Length = 636 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 80/344 (23%), Gaps = 84/344 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 VRL +WN+N + W R + + L+ADIV QE + + Sbjct: 2 VRLTTWNVNGIRNPFSYHPW-----REKRSFEAM---FDALEADIVIFQETKIQRKDLQD 53 Query: 82 KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVR----------------VL 124 + N W F+S + +S +R + Sbjct: 54 DMVLVNGWDCFFSLPKYKKGYSGVVIYTRNSICCPIRAEEGITGILCLPTSGSNLSSPTS 113 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS-- 182 + P + A ++ + + + +F + Sbjct: 114 FRDLPEEAQIGGYPTAEQLALSDVDAATLDSEGRCMILEFPAFVLIGVYCPANRDETRDG 173 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------------YLGN 220 + L + ++ GD N + Sbjct: 174 FRTGFVNVLDARVRNLAAMGKRVIVTGDLNISGSQIDSARALEGVRKGTLTDSEFVSSPV 233 Query: 221 NDDFWKTIDPND-------------SLIRFPKEKDSRCNANKNL---------RNKIPID 258 F + +D + K R ID Sbjct: 234 RRIFNQLVDGGKVIGDRDDGRETPVLVDLCRKYHPDRLGMYTCWEQRVNARPGNYGARID 293 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 Y + D++ + + G SDHCP+ + Sbjct: 294 YVLCDRSMQDWFSASNIQ-----------EGLMGSDHCPVYAEL 326 >gi|237727294|ref|ZP_04557775.1| conserved hypothetical protein [Bacteroides sp. D4] gi|229434150|gb|EEO44227.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] Length = 334 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 36/255 (14%), Positives = 76/255 (29%), Gaps = 42/255 (16%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + +++LV WN + + L IV LQE N Sbjct: 91 PDSNQLKLVCWNAEGFRLNKDT-------------LAKAIHSIRILQPGIVCLQERPHTN 137 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 +A W + + +S D +AV + Q Y + + Sbjct: 138 LLA-------WDTIRAAFPDYPYCIVNSREDEILNLAVFSRWPVGNVQEYYFPDSYNKM- 189 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-----PSCSLLSQQAQWLKD 193 ++ + + G+ + ++HL++ +S ++QA L + Sbjct: 190 -------LQADIRMIGQTFRLFNVHLQTTGMNESSSMKDRLQTMRHHAIRRNRQADLLAN 242 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 I + S P ++ GDFN +++ + + + + Sbjct: 243 AIAE---SPYPVIVCGDFNDTPASYVYRK-ISRSLQDCFLQAGRTWK-----GSYQRWGD 293 Query: 254 KIPIDYFVMDQNAYK 268 + IDY + Sbjct: 294 FLRIDYTLCSPAFQV 308 >gi|189027129|ref|NP_808881.3| 2',5'-phosphodiesterase 12 [Homo sapiens] gi|172046137|sp|Q6L8Q7|PDE12_HUMAN RecName: Full=2',5'-phosphodiesterase 12; Short=2'-PDE; Short=2-PDE Length = 609 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 36/319 (11%), Positives = 76/319 (23%), Gaps = 43/319 (13%) Query: 24 VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R VS+NI S L+++ +AD++ LQE+ Sbjct: 295 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDR 354 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKN------------VRV 123 + P R+ H + ++ + + Sbjct: 355 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFYEALESDPLHKEL 414 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L++ A++ + + V +L + + + Sbjct: 415 LEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVA 474 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPN 231 L ++ +P + GDFN + + D + Sbjct: 475 L-----AHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEER 529 Query: 232 DSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDI 285 ++ K N +DY +D + S Sbjct: 530 CNMSLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQA 589 Query: 286 KSRGKRLSDHCPISIDYDF 304 SDH + D + Sbjct: 590 LPSVSHPSDHIALVCDLKW 608 >gi|190690435|gb|ACE86992.1| phosphodiesterase 12 protein [synthetic construct] gi|190691813|gb|ACE87681.1| phosphodiesterase 12 protein [synthetic construct] Length = 609 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 36/319 (11%), Positives = 76/319 (23%), Gaps = 43/319 (13%) Query: 24 VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R VS+NI S L+++ +AD++ LQE+ Sbjct: 295 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDR 354 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKN------------VRV 123 + P R+ H + ++ + + Sbjct: 355 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFYEALESDPLHKEL 414 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L++ A++ + + V +L + + + Sbjct: 415 LEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVA 474 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPN 231 L ++ +P + GDFN + + D + Sbjct: 475 L-----AHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEER 529 Query: 232 DSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDI 285 ++ K N +DY +D + S Sbjct: 530 CNMSLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQA 589 Query: 286 KSRGKRLSDHCPISIDYDF 304 SDH + D + Sbjct: 590 LPSVSHPSDHIALVCDLKW 608 >gi|126662685|ref|ZP_01733684.1| hypothetical protein FBBAL38_05000 [Flavobacteria bacterium BAL38] gi|126626064|gb|EAZ96753.1| hypothetical protein FBBAL38_05000 [Flavobacteria bacterium BAL38] Length = 371 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 38/371 (10%), Positives = 92/371 (24%), Gaps = 78/371 (21%) Query: 1 MIRKYVLALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKN---------S 46 M K++LA ++ ++ +Q + +N L + + + Sbjct: 1 MKIKHLLAGFIVILSVNSAFSQDKKFKVHTVAFYNFENLFDTINDPDTYDEEYTPVKGWT 60 Query: 47 VKRTTSDYTLLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 K L + L I+ E+ + + + + Sbjct: 61 SKNYKKKLDNLSRVLVELGTSENQKNSPVIIGACEIENRRVLEDLVKQPR---LIDKGYK 117 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS---------------------- 136 I H I ++K+ + L D+ Sbjct: 118 IVHFDSPDKRGIDVGFLYQEKHFQPTSYINVPLYIYDNETSADKKDKKSDDETDDKGSVD 177 Query: 137 --FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R R + + ++G++I ++ H S + + + + L++ + + Sbjct: 178 AKTKRIYTRDQLLVTGLLDGEEINIIVNHWPSRSGGEKKSSPFREAAGRLNR--KIMDSL 235 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS------LIRFPKEKDSRCNAN 248 I F+ GD N ++ ++ F + ++ Sbjct: 236 IK--INPNAKFITMGDLNDGAYNKSVKQGIGAKLNKSELKEPRDVYNPFEQMAKDGHSSL 293 Query: 249 KNLRNKIPIDYFVMDQNAYK---------FLIQESFSEILYNEDDIKSRGKRL------- 292 + D ++ Q + + Sbjct: 294 FYRDSGDIFDQIMVSQQFIPADKNDYSTFKYWKAGIYNKPFLIQKTGQYKGYPLRNQNGV 353 Query: 293 ---SDHCPISI 300 SDH P+ I Sbjct: 354 PGFSDHFPVYI 364 >gi|109037975|ref|XP_001099328.1| PREDICTED: 2',5'-phosphodiesterase 12 isoform 2 [Macaca mulatta] Length = 609 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 36/319 (11%), Positives = 76/319 (23%), Gaps = 43/319 (13%) Query: 24 VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R VS+NI S L+++ +AD++ LQE+ Sbjct: 295 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDR 354 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKN------------VRV 123 + P R+ H + ++ + + Sbjct: 355 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFYEALESDPLHKEL 414 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L++ A++ + + V +L + + + Sbjct: 415 LEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVA 474 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPN 231 L ++ +P + GDFN + + D + Sbjct: 475 L-----AHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEER 529 Query: 232 DSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDI 285 ++ K N +DY +D + S Sbjct: 530 CNMSLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQA 589 Query: 286 KSRGKRLSDHCPISIDYDF 304 SDH + D + Sbjct: 590 LPSVSHPSDHIALVCDLKW 608 >gi|47826687|dbj|BAD20938.1| 2'-phosphodiesterase [Homo sapiens] gi|119585746|gb|EAW65342.1| 2'-phosphodiesterase, isoform CRA_a [Homo sapiens] gi|194390702|dbj|BAG62110.1| unnamed protein product [Homo sapiens] Length = 609 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 36/319 (11%), Positives = 76/319 (23%), Gaps = 43/319 (13%) Query: 24 VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R VS+NI S L+++ +AD++ LQE+ Sbjct: 295 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDR 354 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKN------------VRV 123 + P R+ H + ++ + + Sbjct: 355 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFYEALESDPLHKEL 414 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L++ A++ + + V +L + + + Sbjct: 415 LEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVA 474 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPN 231 L ++ +P + GDFN + + D + Sbjct: 475 L-----AHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEER 529 Query: 232 DSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDI 285 ++ K N +DY +D + S Sbjct: 530 CNMSLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQA 589 Query: 286 KSRGKRLSDHCPISIDYDF 304 SDH + D + Sbjct: 590 LPSVSHPSDHIALVCDLKW 608 >gi|47567194|ref|ZP_00237908.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus G9241] gi|47556037|gb|EAL14374.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus G9241] Length = 263 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 77/269 (28%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 18 EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ V + ++ + KD+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKGQVNRLMEHVD----SNEISFLMGDFNNNARLQG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ +D+ ++ + + ID + +++ + Sbjct: 183 EGYEYMMQKGLHDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKVRSSKVI 242 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ N +SDH + + D Sbjct: 243 FNGTNRNI---------ISDHFGVEVQVD 262 >gi|50422749|ref|XP_459951.1| DEHA2E14872p [Debaryomyces hansenii CBS767] gi|49655619|emb|CAG88197.1| DEHA2E14872p [Debaryomyces hansenii] Length = 301 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 39/277 (14%), Positives = 79/277 (28%), Gaps = 18/277 (6%) Query: 30 NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89 N+ + + + +R L+ +V LQE+ + + N Sbjct: 35 NVR-VDTDNRFASEQPWSERKGGVIQALQSR-NENGPTLVGLQELKHNQLLDILQGLNGN 92 Query: 90 CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL----LGAKDSFSRAGNRRA 145 + ++A+ + +L + A R Sbjct: 93 GNNIPWTHFGVGRDDGAEKGEYSAVLYNTEEWSLLNGTSRWLSETPDTPSIAWGAATIRI 152 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 V + + + V++ F S + A + WI Q + P Sbjct: 153 VTMTTMQHKQSGKVVNYFNTHF---------DHKSEEARQKSADLIAGWIQQM-PNNYPT 202 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 ++GDFN + + D N + + S + N+ ID+ Sbjct: 203 FLSGDFNSISSDVAYQTLQKSLKDSNTAAYQHINGNLSTYTGFEKNDNQSIIDFIW--SP 260 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + Y D G R SDH P+++ + Sbjct: 261 LNTNQENSNTYALEYEVLDNMYNGSRFSDHRPVNVHF 297 >gi|290789984|pdb|3G91|A Chain A, 1.2 Angstrom Structure Of The Exonuclease Iii Homologue Mth0212 Length = 265 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 82/302 (27%), Gaps = 81/302 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81 ++++SWN+N L ++ DI+ LQE+ + Sbjct: 4 LKIISWNVNGLRAVHRKGF---------------LKWFMEEKPDILCLQEIKAAPEQLPR 48 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K+ + F++ + + +A+ K + + D+ R Sbjct: 49 KLRHVEGYRSFFTPAERKGY----------SGVAMYTKVPPSSLREGFGVERFDTEGRIQ 98 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + +I+ + + + + + ++++S Sbjct: 99 I---------ADFDDFLLYNIYFPNGAMSEER-------LKYKLEFYDAFLEDVNRERDS 142 Query: 202 LVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245 +I GDFN + K I+ + + +S Sbjct: 143 GRNVIICGDFNTAHREIDLARPKENSNVSGFLPVERAWIDKFIENG--YVDTFRMFNSDP 200 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +DYF +++ + + SDHC Sbjct: 201 GQYTWWSYRTRARERNVGWRLDYFFVNEEFKGKVKRSWIL-----------SDVMGSDHC 249 Query: 297 PI 298 PI Sbjct: 250 PI 251 >gi|229056209|ref|ZP_04195634.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603] gi|228721126|gb|EEL72659.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603] Length = 263 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 75/269 (27%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS--------- 102 L + + D D++ LQE+ V F + Sbjct: 18 EKIKYLAKVIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELRALNVKEYNII 77 Query: 103 ---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ V + ++ + KD+ R+ V + N K I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNIVKEDTFFVSENKDTTYWK-TRKIVSATIAYNDKNITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKDQVDRLMERVN----SNELSFLMGDFNNNARLEG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +Q+ + Sbjct: 183 EGYEYTMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKQNLRIDLILSNQSKTVNSSKVI 242 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ N +SDH + + D Sbjct: 243 FNGTNRNV---------ISDHFGVEVQLD 262 >gi|190691695|gb|ACE87622.1| phosphodiesterase 12 protein [synthetic construct] Length = 575 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 36/319 (11%), Positives = 76/319 (23%), Gaps = 43/319 (13%) Query: 24 VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R VS+NI S L+++ +AD++ LQE+ Sbjct: 261 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDR 320 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKN------------VRV 123 + P R+ H + ++ + + Sbjct: 321 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFYEALESDPLHKEL 380 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L++ A++ + + V +L + + + Sbjct: 381 LEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVA 440 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPN 231 L ++ +P + GDFN + + D + Sbjct: 441 L-----AHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEER 495 Query: 232 DSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDI 285 ++ K N +DY +D + S Sbjct: 496 CNMSLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQA 555 Query: 286 KSRGKRLSDHCPISIDYDF 304 SDH + D + Sbjct: 556 LPSVSHPSDHIALVCDLKW 574 >gi|146282503|ref|YP_001172656.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas stutzeri A1501] gi|145570708|gb|ABP79814.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas stutzeri A1501] gi|327480758|gb|AEA84068.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas stutzeri DSM 4166] Length = 267 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 41/292 (14%), Positives = 91/292 (31%), Gaps = 52/292 (17%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A+ +R+++ N + LR+ +++ AD+VFLQE+ Sbjct: 19 ATAVNSIRILTVNTHKGFTALNRRF----------ILPELREAVRSVSADVVFLQEVLGT 68 Query: 78 NAVAKV----FPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + + +PK F + + + D A+ K + ++ + Sbjct: 69 HEKHAMRFHNWPKTPQYEFLADSIWTDFAYGRNAVYPDGDHGNALLSKFPIIRYENLDIS 128 Query: 132 GAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 A R + ++++ G ++ + +HL S +QQ + Sbjct: 129 IAG-----PERRGLLHSVLQVPGHEEFHAICVHLGLR-------------ESHRAQQLEL 170 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 L + + P V+AGDFN + D + + + ++ + Sbjct: 171 LCNLLDS-LPQGAPVVVAGDFNDWRLRATHTLDRCAGLHE---VFAVAHGQVAKTFPARW 226 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + LSDH P++++ Sbjct: 227 PML--RLDRIYVRNATSHK-----------PRILGNKPWTHLSDHLPLAVEI 265 >gi|89074584|ref|ZP_01161056.1| hypothetical protein SKA34_11975 [Photobacterium sp. SKA34] gi|89049688|gb|EAR55247.1| hypothetical protein SKA34_11975 [Photobacterium sp. SKA34] Length = 379 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 45/378 (11%), Positives = 96/378 (25%), Gaps = 92/378 (24%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 +P Q +R+ +N+ SE E +++ + T + L +N++AD++ L Sbjct: 4 FLPTVLETKQSLRVAMFNVAM-SEPEQGRIFQLTSSLTNKRFQRLAAIIQNVNADVLLLC 62 Query: 73 EMGSYNA-----------VAKVFPKNTWCIFYSTERLINHSK------------------ 103 E + + S Sbjct: 63 EFDHPGNGGDDGSLDNFCLNYLSHSQYQQPVIDYPYRYCPSSNTGLLTEIDLNDDGVCSL 122 Query: 104 -----RDSNNDIHTAIAVRKKNV-----RVLQQSYPLLGAKDSFS-------------RA 140 H V K Q + ++ R Sbjct: 123 PEDAQGYGEFHGHFGFVVLSKYPLQQENIRTWQHFLWKDMPNNLMPVDYYSKYAQDILRL 182 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK- 199 ++ V + + + K+I +L H F + + + Q L D I Sbjct: 183 SSKNHVVIPIVVKDKEINLLCCHPTPPVFDGNE----RRNAKRNHDEIQLLIDIINDAPY 238 Query: 200 -----------ESLVPFVIAGDFNRKINYLGNNDDFWKTI-----------------DPN 231 + F++ GD N I+ K + Sbjct: 239 LVDDNDQVGGLKPDDAFIVMGDLNADIDDGDGYKAAIKQLLKHDKINKTVSRGKYTPKSE 298 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK------FLIQESFSEILYNEDDI 285 + ++K + + +DY + +N + + L + Sbjct: 299 GGRHYYSRQKRTGRKNEWTHLAGLRLDYVLPSENLEVIKTGVFWPDKSDALRELILDCKG 358 Query: 286 KSRGKRLSDHCPISIDYD 303 + + SDH + +D + Sbjct: 359 REKPVAGSDHRMVWVDIN 376 >gi|223647596|gb|ACN10556.1| Deoxyribonuclease gamma precursor [Salmo salar] Length = 298 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 33/289 (11%), Positives = 78/289 (26%), Gaps = 35/289 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NI + E ++ DI+ + E+ + K Sbjct: 29 LKICTFNIQSFGE---------KKIEKQEVVDVILALIARC--DIMLVMEIKDLSG--KA 75 Query: 84 FPKNTWCIFYSTERLINHSKRDSNN-------DIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 FP+ + N ++ A R++ V V ++ Y + Sbjct: 76 FPQLMTQLNSDYSSRKNEYNYVISDRLGRKSYKEQYAFIYRQRLVSV-KEVYQYPDTQLG 134 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 A +R + + I S +++ +D Sbjct: 135 DEDAFSREPFIVWFSSPKTVVQDFVIIPIHTTPDT--------SVREINELYDVFQDVKQ 186 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + +I GDFN Y+ + + S + + Sbjct: 187 RWTSKN--VIIMGDFNADCGYVPKKQWSSIRLRSDTSFLWLTGDTIDTTVKESTDCAYDR 244 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDYD 303 + + + + S + + + +SDH P+ I + Sbjct: 245 V--VLHGDKMIQAVKPTSLDVFDFRQAYGLTELQALAVSDHYPVCITVN 291 >gi|319794897|ref|YP_004156537.1| endonuclease/exonuclease/phosphatase [Variovorax paradoxus EPS] gi|315597360|gb|ADU38426.1| Endonuclease/exonuclease/phosphatase [Variovorax paradoxus EPS] Length = 346 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 40/325 (12%), Positives = 96/325 (29%), Gaps = 52/325 (16%) Query: 23 KVRLVSWNINTLSEQE---GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + + + N+ L+ + + + + + L+AD++ +QE+ A Sbjct: 10 TLFVATCNLLNLANPNRVYYENQDAYNEREYERKIDWIGERFHALNADVLAVQEVWDEAA 69 Query: 80 VAKVFPKNTWCIFYSTER-----------LINHSKRDSNNDIHTAIAVRKKNVRVLQ-QS 127 + ++ + + + + IA R + V Sbjct: 70 LKAAIARSGLRYDFVSVPGAENTPPPGSPPGTPPRAGAQGTPRVGIATRLQVDNVQSFVD 129 Query: 128 YPLLGAKD----SFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFL------------ 170 +P D R + + + +G+++ VL +HLKS Sbjct: 130 FPPAFGVDVPGLGPHTRFERPPLLATLRMKHGQQVHVLTVHLKSKRPKFLQDAQGNHLED 189 Query: 171 ----DSLENTYSPSCSLLSQQAQWLKDW-ITQKKESLVPFVIAGDFNRKINY-------L 218 S + +A L+ I + + P V+ GDFN + Sbjct: 190 RDDRKVGVMASLRSLLMRGAEAAALRCIVIDLLQGTNTPLVVMGDFNDNPHSVTTQLVAA 249 Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYKFLI-- 271 + + K + + +S ++ + +D ++ + Sbjct: 250 TSEVAYDKAARDVALFNAYEMQGESALKKDVAYSHIHQGFPDVLDQILVSEEFIASSRHS 309 Query: 272 -QESFSEILYNEDDIKSRGKRLSDH 295 + +N+ + R + SDH Sbjct: 310 LGDVRRVDYFNDHLHEGRDRSRSDH 334 >gi|291515225|emb|CBK64435.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301] Length = 292 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 29/282 (10%), Positives = 67/282 (23%), Gaps = 39/282 (13%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 +S+NI + + + + D++ QE Sbjct: 38 MSFNIRYY------KPGADGDNGWVARRAACLEMIRAESPDVIGFQEPHRPQIDYLKVNL 91 Query: 87 NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK-----DSFSRAG 141 + ++ + H I R+ +L + + + Sbjct: 92 PEYAEVDMGRDAATDIEKKPDGGEHLMIMYRRSKYILLDSGFFWISPTPECPSRGWDAMC 151 Query: 142 NRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R V + ++ GK+ + D H ++ A+ + + + Sbjct: 152 RRVTVWVQLKDRKTGKEFFYFDTHFDHIGK------------QARAESARMMVARMKRIA 199 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-PID 258 ++GD N + + + R + + ID Sbjct: 200 GEKAAVFLSGDLNTTYD-----NALLDPLKAWMQSARHAAPVTDELPTFNDFGKRSLWID 254 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + D + LSDH P+ Sbjct: 255 FIFARNARALAY--------RTLVDSGRYGVPFLSDHNPVYA 288 >gi|257466188|ref|ZP_05630499.1| Endonuclease/exonuclease/phosphatase [Fusobacterium gonidiaformans ATCC 25563] Length = 265 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 36/297 (12%), Positives = 90/297 (30%), Gaps = 54/297 (18%) Query: 24 VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++L++ N++ L ++ LL + D++ LQE+ Sbjct: 1 MKLLTINVHSWL------------EEKQEEKMELLAKVIAEKRYDVIALQEVNQKIEARL 48 Query: 83 VFPKNTWCIFYS------------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 + + F + IA+ ++ + ++ + Sbjct: 49 LKGEIREDNFLYQLCKKIEKYTEEKYEYHWSHSHIGFDIYEEGIALLTRHSILEKEDFYC 108 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 +K +S + +R+ V++ +EI GK+I H+ ++ + Sbjct: 109 TNSKTVYSIS-SRKIVKIFLEIEGKEIEFYSCHMNLPDCIEENMEQNIQN---------- 157 Query: 191 LKDWITQKKESLVPFVIAGDFNRK--INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 I + ++ GDFN + + + + +L + + + Sbjct: 158 ----ILKHSSRNCLKILMGDFNTDAFHDESSYQKILEQGLFDSYTLSKKKDDGVTVYKNI 213 Query: 249 KNLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N + +DY + + F+ Y +SDH + + Sbjct: 214 SGWENSVEEKRLDYIFLTEQYEVESSYVIFNGKNYPC---------ISDHNGLEVIL 261 >gi|302545710|ref|ZP_07298052.1| putative secreted protein [Streptomyces hygroscopicus ATCC 53653] gi|302463328|gb|EFL26421.1| putative secreted protein [Streptomyces himastatinicus ATCC 53653] Length = 446 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 33/293 (11%), Positives = 78/293 (26%), Gaps = 40/293 (13%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + +++N+ L E + + + DIV +QE +Y+A Sbjct: 39 SGSFNALTYNVAGLPEGLSSGHPEKNTPLISPRLGA---------YDIVNVQEDFNYHAA 89 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + R + ++T + + Sbjct: 90 -------LYAGDDHPYRTPTSGGAAFGDGLNT----LSDLPYDDFERVKWTKCNGTDCLT 138 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + + G + + ++H + + L D+I Sbjct: 139 PKGFTLARVRLAEGAYLDLYNVHTNAGTTD--------ADLAARRANITQLSDFI-TANS 189 Query: 201 SLVPFVIAGDFNRKINYLG--NNDDFWKTIDPNDSLIRFPKEKDSR-------CNANKNL 251 + ++ GD N + D + + + C+ + Sbjct: 190 AGNAVLVMGDTNTRYTRAADNIRDLATRNGLTDAWVNLVRGGSAPPAGSDALVCDPDNVT 249 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +D + L ++ D + + GK LSDH P ++D+ + Sbjct: 250 NTCEVVDKVLYRSGPLLSLTAARYNNEN--TDFLDAEGKPLSDHYPHTVDFSW 300 >gi|90022590|ref|YP_528417.1| metal-dependent hydrolase-like protein [Saccharophagus degradans 2-40] gi|89952190|gb|ABD82205.1| Endonuclease/exonuclease/phosphatase [Saccharophagus degradans 2-40] Length = 261 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 74/301 (24%), Gaps = 59/301 (19%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 + ++A + C A+ ++S+NI T + L + Sbjct: 18 MGTLIVASLLAASSCMAN-----TVMSFNIRTEHANDPGELA------WEKRKNNVVDVI 66 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + ++ LQE + + L + + + Sbjct: 67 VKANPSVIGLQEASTNQ-------QQYIEEALGPNWLPVANAPILFRSDMYRLLAKGAIE 119 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 V + R A + ++ L I S + Sbjct: 120 LVEDK-------------WEKRFAYWVKLKAKNTNTSWLFITTHWGVDEASQLGSAE--- 163 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 L I + +P V+ GDFN + N K ++ + F Sbjct: 164 ----ILLNALPAVIKNWQ---LPVVLVGDFNAEPNSEPY----LKMVNGSPLQNNFWGLT 212 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + + IDY + D + SDH PI + Sbjct: 213 FTGFKSKAI----AQIDYAW----------AAGLTINKCKADRFDAYATPASDHYPIICE 258 Query: 302 Y 302 + Sbjct: 259 F 259 >gi|124506311|ref|XP_001351753.1| CCR4 [Plasmodium falciparum 3D7] gi|23504682|emb|CAD51560.1| CCR4 [Plasmodium falciparum 3D7] Length = 2488 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 41/370 (11%), Positives = 89/370 (24%), Gaps = 87/370 (23%) Query: 22 QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + +++WN+ E + + T + Q N DIV LQE+ + + Sbjct: 2116 NQFTIMTWNVLAEIYGTIEAFPHCDPYMLAWSYRKTKIIQEILNNSPDIVCLQEIQNEHF 2175 Query: 80 VAKVFPKNTWCIFYSTERLI-------NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + P + + KR A+ ++ L Sbjct: 2176 LDFFKPSLGEFGYEGVYKQKTKEIFTSPSGKRRGGKYTIDGCAIFYNKKKLKFVETYALE 2235 Query: 133 AKDSFSRA---------GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----- 178 A ++ + + + +L ++ + + Sbjct: 2236 FSKLIKEASVLTLPKEIQKNPSLVKRLLKDNVALVILLECIQQYSKIYDKSEEKQNKKLL 2295 Query: 179 -----------PSCSLLSQQAQWLKDWIT-------QKKESLVPFVIAGDFNRKINYL-- 218 + + Q Q L I +K E++ +I GDFN + Sbjct: 2296 IVANTHIVANPEANYVKIWQTQILVKVIEYLKINFIKKYETIPSLIICGDFNSTPSSAVY 2355 Query: 219 -------------GNNDDFWKTIDPNDSLIRFPKEKDS---------------------- 243 N D + + + Sbjct: 2356 QLIYKKTCSRTHEDFNSDKYSLLTDLKLGHNLNLKSAYAISKLLSQKLNPEEYNNLELYE 2415 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK---------RLSD 294 N +DY + + + ++ + + R SD Sbjct: 2416 PLFTNYTSNFIGCLDYIFYNDENLNIISTVNVADENQLIQEAQMYQLSDCALPSPIRPSD 2475 Query: 295 HCPISIDYDF 304 H P+ ++F Sbjct: 2476 HLPLIAQFEF 2485 >gi|323495481|ref|ZP_08100555.1| nuclease [Vibrio sinaloensis DSM 21326] gi|323319362|gb|EGA72299.1| nuclease [Vibrio sinaloensis DSM 21326] Length = 1007 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 40/395 (10%), Positives = 97/395 (24%), Gaps = 117/395 (29%) Query: 23 KVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--------------------LLRQYA 61 +R+ S+N+ N + + N+ +D + Sbjct: 474 DLRVASFNVLNYFTSHSSIGGPLNASCDDQADADASRGCNRGAKELDEFLVQKAKIVNAM 533 Query: 62 KNLDADIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSN 107 +DADI+ L E+ + +A+ + ++ + + + + Sbjct: 534 VKMDADIIGLMEVENNGFAEGSAIQDLVDALNAKISDTEDHYSFVEIEDGDKYNDDFFGS 593 Query: 108 NDIHTAIAVRKKNVR-------------------VLQQSYPLLGAKDSFSRAGNRRAVEL 148 + I AI R +V + + + R ++ Sbjct: 594 DAIMVAILYRADSVTPKEAATVIITPEQHIAADTITRDDGKGGQEGNPAYDKYQRHSLLQ 653 Query: 149 LVEIN--GKKIWVLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + G+ + ++ H KS + + A + + + Sbjct: 654 TFTVKETGEDLSIVVNHFKSKGSECIEEWIAGVEDTEPTDLQGNCNNFRVSAAHAVGEAL 713 Query: 196 TQKKESLVPFVIAGDFNR-------------KINYLGNNDDFWKTI-------------- 228 K ++ GD N + N D+ + I Sbjct: 714 KDVKGD---VLVMGDLNAYGMEDPLLTLTDYDASDAENGKDYGREIYTAAYTNVAGGEVS 770 Query: 229 -------DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + + +D+ + + + ++ I Sbjct: 771 AERTKIEKGFGYTNLNTLLHGADTFSYTYSGELGNLDHALASSSLAQKVVAIEDWHINSL 830 Query: 282 EDDIKSRGKR-------------LSDHCPISIDYD 303 E ++ + SDH P+ I D Sbjct: 831 ESNLFEYSSKYTGNMPKYTDVYSASDHDPVLIAID 865 >gi|307709700|ref|ZP_07646152.1| exodeoxyribonuclease III [Streptococcus mitis SK564] gi|307619598|gb|EFN98722.1| exodeoxyribonuclease III [Streptococcus mitis SK564] Length = 275 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K S+P +GA S R Sbjct: 55 KHLEILAELFPNYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDLEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + K +V ++ + ++ L + Sbjct: 114 I-----ITLEFDKFFVTQVYTPNAGDGLKRLEERQIWDVKYAEYLAEL--------DKEK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 VLEIE 274 >gi|332216271|ref|XP_003257271.1| PREDICTED: 2',5'-phosphodiesterase 12 [Nomascus leucogenys] Length = 609 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 35/319 (10%), Positives = 75/319 (23%), Gaps = 43/319 (13%) Query: 24 VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R VS+NI S L+++ +AD++ LQE+ Sbjct: 295 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDR 354 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKN------------VRV 123 + P R+ H + ++ + + Sbjct: 355 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFYEALESDPLHKEL 414 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L++ A++ + + V +L + + + Sbjct: 415 LEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVA 474 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPN 231 L ++ +P + GDFN + + D + Sbjct: 475 L-----AHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEER 529 Query: 232 DSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDI 285 ++ N +DY +D + S Sbjct: 530 CNMSLTHFFNLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQA 589 Query: 286 KSRGKRLSDHCPISIDYDF 304 SDH + D + Sbjct: 590 LPSVSHPSDHIALVCDLKW 608 >gi|299752303|ref|XP_002911744.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Coprinopsis cinerea okayama7#130] gi|298409772|gb|EFI28250.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Coprinopsis cinerea okayama7#130] Length = 684 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 99/352 (28%), Gaps = 71/352 (20%) Query: 22 QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---S 76 + V ++S+NI + + + + + + DI+ LQE+ Sbjct: 309 ETVSVLSYNILCEKYATERLYGYTPSWALAWSYRKHQIMKEITEHGTDIICLQEVDIAQY 368 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND--IHTAIAVRKKNVRVLQQSYPLLG-- 132 + ++ ++ + Y + +S+ AI + +++++ + Sbjct: 369 EDFFSRDLEEHGYAGAYHPKSRSRTIHNESDRRLVDGCAIFYKSSRFQLVEKQHIEFSAL 428 Query: 133 ---------AKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCF-LDSLENTYS 178 D F+R + + +L ++ G +I + ++H+ D + Sbjct: 429 AMQRQDFKKTDDMFNRVLGKDHIAVLCLLEDKVTGTRILIANVHVHWDPAYSDVKLVQVA 488 Query: 179 PSCSLLSQQAQWLKDWITQKKES------------------------LVPFVIAGDFNRK 214 + + A L + + +S VP +IAGDFN Sbjct: 489 LLVDEVEKSANQLAKYPPRPPKSATPGAGDSEPGKPERNPPHYTDGTKVPLIIAGDFNST 548 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-----------------------ANKNL 251 + ++ PN + K + N Sbjct: 549 PDSSVYEFLSTGSLPPNHADFLSHKYGRYTSDGMKHRLNLRSAYASPSLAAEQHLTNYTP 608 Query: 252 RNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +DY N I + SDH I + Sbjct: 609 SFQGELDYIWYSASNLAVNQILSPMDHRYLEKVVGFPNVHFPSDHISIGCEL 660 >gi|238881455|gb|EEQ45093.1| conserved hypothetical protein [Candida albicans WO-1] Length = 359 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 74/309 (23%), Gaps = 45/309 (14%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--- 79 +RL + NI ++ + R ++ + +I+ LQE+ Sbjct: 63 TLRLYTNNIRFDNKNYPDKYEQPWEIRKFQSINSMQFNTFQGNGNIICLQEVLHNQLIDI 122 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD---- 135 + + W + S + + + ++ L Sbjct: 123 LQGLNDIQEWNYYGVGRTDGEKSGEFAPILYKD-----QDFKIIENSTFWLSPTPHVPSK 177 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + A R + + +I + S L+ + + Sbjct: 178 GWDAALERIVTMVTFQSRLNPEIKFNIFNTHY--DHRGVEARRKSSQLIVDKMK------ 229 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR--FPKEKDSRCNANKNLRN 253 + P + GDFN + N + LI ++ Sbjct: 230 ---NYNDYPSFLCGDFNTEPNDEPYHILTKAGFKDGKILIDKKSAYGFETTFTGFDINNE 286 Query: 254 K-IPIDYFVMDQNAYKFLIQE------------------SFSEILYNEDDIKSRGKRLSD 294 IDY + + L + + G SD Sbjct: 287 PISRIDYIW-SPSFTRILSNSNNDTNQDSDDDNDNDESYEVTLKQFGILSNWFNGHHFSD 345 Query: 295 HCPISIDYD 303 H P+ Y+ Sbjct: 346 HRPVVSTYE 354 >gi|300774843|ref|ZP_07084706.1| endonuclease/exonuclease/phosphatase family protein [Chryseobacterium gleum ATCC 35910] gi|300506658|gb|EFK37793.1| endonuclease/exonuclease/phosphatase family protein [Chryseobacterium gleum ATCC 35910] Length = 396 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 34/296 (11%), Positives = 80/296 (27%), Gaps = 36/296 (12%) Query: 35 SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS 94 ++ G ++K + + + +V L E+ + + + + + Sbjct: 105 AKNYGTKIYKAKLANEAKVISEMGAQYTKTAPAVVGLIEVENRQVIQDLVNEPALKKYDY 164 Query: 95 TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKDSFSRAGNRRAVELLVEIN 153 N I A+ +K+ L+ D+ R R + + ++ Sbjct: 165 GIIHYNS---YDYRGIDVALIYQKRRFTPTNSLKKELVIYGDNGKREYTRDILVVTGFLD 221 Query: 154 GKKIWVLDIHLKSFCFLDSLE-NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 +K+ H S +++ + + +LL QQ ++ + GDFN Sbjct: 222 NEKVAFFMNHWPSRRGGEAISLPKRNAAAALLKQQMDSVRA-----ADPTTKLFAMGDFN 276 Query: 213 RKINYLGNNDDFWKTIDPND------SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 + +P D L + D ++ +N Sbjct: 277 DDPVSPSLKNHLKAQANPKDLSEETPYLNLMYPLYKKGVASLAYQDAPNLFDQIIVSKNL 336 Query: 267 YKFLIQESFSE--------------------ILYNEDDIKSRGKRLSDHCPISIDY 302 + + +S + + SDH P + Sbjct: 337 ISDQVTKEYSVYKTEIFAPAYLVNKEGNYKGYPFRSWNGDQFTGGYSDHFPAFVVL 392 >gi|167736590|ref|ZP_02409364.1| exodeoxyribonuclease III [Burkholderia pseudomallei 14] Length = 256 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 85/305 (27%), Gaps = 75/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++ N+N + + ++ +AD V +QE+ KV Sbjct: 2 LRVITANLNGIRSAAKKGFF---------------EWLGEQNADCVCVQEI-------KV 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + F L +H A ++ ++G S A R Sbjct: 40 SADDLPAEFVEPHGLRSHFHHAQKKGYSGAGLYSRREP-----DDVIIGYGSSEFDAEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 VE K+ V+ +++ S D + L ++ Sbjct: 95 Y-----VEARFGKLSVVSVYVPSGSSGDERQQAKYRFMDEFMPHLAEL--------KAKR 141 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N + + + + + + + D R Sbjct: 142 EVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTKLFDDVGYVDVFRTLDPRPEQY 201 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY + S R + SDH P++ Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKNTSI-----------FRDIKFSDHAPLT 250 Query: 300 IDYDF 304 +DYD+ Sbjct: 251 VDYDY 255 >gi|317418621|emb|CBN80659.1| '2',5'-phosphodiesterase 12' [Dicentrarchus labrax] Length = 562 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 45/326 (13%), Positives = 85/326 (26%), Gaps = 52/326 (15%) Query: 23 KVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 VR+VS+NI LS+ + L+++ +ADIV LQE+ Sbjct: 243 SVRVVSYNILADIYAQTELSKNVLYPYCAPYALQLDYRQNLIKKELAGYNADIVCLQEVD 302 Query: 76 S---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL-------- 124 +++ + + + + R + Sbjct: 303 KVVFTDSLTPALDAFGLDGVFRVKEKQHEGLATYYRRSKFQLLSRHDIMLSEALTSDPIH 362 Query: 125 ------QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + L K + +V + G+K+ V + HL ++ Sbjct: 363 SALLEKVSANSALKDKILMRSTALQVSVLEDLNKPGRKVCVANTHLYWHPKGGNVR---- 418 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + Q L I + P V GDFN N G + + P Sbjct: 419 --LVQMGVALQHLSHVINEVAP-GAPLVFCGDFNSTPNS-GVFQLVSEAVVPQQHPDWSS 474 Query: 239 KEKDSRC-------------------NANKNLRNKIPIDYFVMDQNAYKFLIQESF-SEI 278 + C N +DY + ++ + + Sbjct: 475 SGPEESCSMELLSTFPPLLSACSQPAYTNYVGGFHGCLDYIFIQPDSMQVEQMIPLPTHQ 534 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 + SDH + D + Sbjct: 535 EVTTYEALPSVAHPSDHIALICDLRW 560 >gi|315918688|ref|ZP_07914928.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D2] gi|313692563|gb|EFS29398.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D2] Length = 289 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 35/286 (12%), Positives = 69/286 (24%), Gaps = 46/286 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----SYN 78 +R+ ++N+ + T+ + Q K+ D +I +E SY Sbjct: 44 SMRVATYNLQ-----------VETGTGWTNRRERVAQLIKDYDFEICGFEEASWEQRSYL 92 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 T N + S + R P + + Sbjct: 93 GTQLASDYQILAYGRDTGNDDNKAGEMSGILYKKSRYTLLDAGRFWFSETPDIPSNGWDE 152 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R V + + + ++ Q L D ++ K Sbjct: 153 TNFKRFCVWGKFKDSKTQKEFYLFETHMPLADNA-----------RKHACQMLVDAVSDK 201 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + P GDFN + + + + K ID Sbjct: 202 AKDNTPAFCTGDFNATPDAPEIATTICQ---SGILKDAYREAAVQHGALFTFPSKKTRID 258 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP--ISIDY 302 + + + + + LSDH P I ++ Sbjct: 259 FIFV----------KHATVLSTRTIVSS-----LSDHYPMVIVVEI 289 >gi|307324753|ref|ZP_07603959.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger Tu 4113] gi|306889635|gb|EFN20615.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger Tu 4113] Length = 380 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 31/295 (10%), Positives = 74/295 (25%), Gaps = 40/295 (13%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + ++++N+ L E + + DIV +QE +Y+ Sbjct: 38 AATGTFNVLTYNVAGLPEGLSSGHPAKNTPLISPRLGA---------YDIVNVQEDFNYH 88 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 A + + S + + + + Sbjct: 89 AALYAGDDHPYRTPTSG-----------GAGLGDGLNTLSGLPYDDFERVKWNRCNGTDC 137 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + + G + + ++H + + L D+I Sbjct: 138 LTPKGFTLARVRPAEGAYLDLYNVHTNAGTTD--------ADLAARRANVTQLSDYI-TA 188 Query: 199 KESLVPFVIAGDFNRKINYLG--NNDDFWKTIDPNDSLIRFPKEKDSR-------CNANK 249 + ++ GD N + D + + + C+ Sbjct: 189 NSAGNAVLVMGDTNTRYTRAADNIRDLATRNGLTDAWVDLVRGGSAPPAGSDALVCDPEN 248 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +D + L + + + + GK LSDH P ++D + Sbjct: 249 VTDTCEVVDKVLYRSGPLLSLAATRYH--NEHTSFLDAEGKPLSDHYPHTVDLSW 301 >gi|19745558|ref|NP_606694.1| 3'-exo-deoxyribonuclease [Streptococcus pyogenes MGAS8232] gi|19747679|gb|AAL97193.1| putative 3'-exo-deoxyribonuclease [Streptococcus pyogenes MGAS8232] Length = 275 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 83/305 (27%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + R + DADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTGESPRALLSR------AVLDTLVAQDADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + S + + KN ++P +GA + G Sbjct: 55 KHIEALLSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVSTFPEIGAPTTMDAEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + +V ++ + + + L ++ Sbjct: 114 -----IITLEFEDFFVTQVYTPNAGDGLRRLDDRQIWDHKYADYLTEL--------DAQK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + AGD+N R + + + F + Sbjct: 161 PVLAAGDYNVAHKEIDLANPSSNRRSPGFTDEERQSFTNLLARGFTDTFRHLHGDIPHVY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLASNRLVDKVKRSEMISSGERQ-----------DHTPI 269 Query: 299 SIDYD 303 +D D Sbjct: 270 LLDID 274 >gi|149175989|ref|ZP_01854606.1| deoxyribonuclease gamma (precursor) [Planctomyces maris DSM 8797] gi|148845143|gb|EDL59489.1| deoxyribonuclease gamma (precursor) [Planctomyces maris DSM 8797] Length = 343 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 30/288 (10%), Positives = 76/288 (26%), Gaps = 37/288 (12%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-- 75 + +R+ ++NI S + +L + + D+V +QE+ Sbjct: 71 PRSDETIRIATFNIQVFGH---------SKMQKPEVPQILARIIQQF--DVVAVQEIRAL 119 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + + R ++ + + + + +Y ++ D Sbjct: 120 DQSFLDEFLKILNAGEQQYGCLVGPRQGRTASKEQYAYFYNTARITVNEKWTYTVIDKYD 179 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R L + I++ + E + + Sbjct: 180 KLHRPPYVAHFRTLSPSSSNPFTFSLINIHTDPDETDQELNV----------LDDVYRVV 229 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 ++ GD N +LG + N K+ + Sbjct: 230 ANDGSQEDDVILLGDLNVDDQHLGE---------LGQVSDIMWTVSKTPTNTRKSKQY-- 278 Query: 256 PIDYFVMDQNAYKFLIQES-FSEILYNEDDIKSRGKRLSDHCPISIDY 302 D + + + +S + + +SDH PI ++ Sbjct: 279 --DNILFSRRRSQEFTGKSGVYDFRTRFKLSEKEALTVSDHLPIWAEF 324 >gi|108797936|ref|YP_638133.1| endonuclease/exonuclease/phosphatase [Mycobacterium sp. MCS] gi|119867032|ref|YP_936984.1| endonuclease/exonuclease/phosphatase [Mycobacterium sp. KMS] gi|108768355|gb|ABG07077.1| Endonuclease/exonuclease/phosphatase [Mycobacterium sp. MCS] gi|119693121|gb|ABL90194.1| Endonuclease/exonuclease/phosphatase [Mycobacterium sp. KMS] Length = 255 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 74/307 (24%), Gaps = 81/307 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78 +R+ ++NI D L Q + LDADIV LQE+ + Sbjct: 1 MRVATFNILHGRSVHDG----------EVDVDRLAQSIRELDADIVALQEVDLHQPRSGT 50 Query: 79 -----AVAKVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 A+ + + + + R+ IA+ + Q Sbjct: 51 TDLTAVAAEAMRAVSHRFVAAIAGTPGATWMAATGREQPGTAAYGIALLSRFPAETWQVV 110 Query: 129 PLLGAKDSFS------------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 L F R A+ + + V + HL + Sbjct: 111 RLPRIPVPFPMYLPGPNRVQIVNEEPRAAMVGTFDTPLGPLTVANTHLSFVPGWN----- 165 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 Q + L + + P ++ GD N Sbjct: 166 --------RVQMRHLVRDLRGFEG---PRMLLGDLNMSPP---------------TPARW 199 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 +D+ + + + + S + +SDH Sbjct: 200 ARMRSLGEGLTFPAHAPDRQLDHVL-TDDPRLRVEKCSAVSLP------------ISDHR 246 Query: 297 PISIDYD 303 + +D Sbjct: 247 ALVVDIS 253 >gi|53717833|ref|YP_106819.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei K96243] gi|53724973|ref|YP_102006.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 23344] gi|67642475|ref|ZP_00441231.1| exodeoxyribonuclease III [Burkholderia mallei GB8 horse 4] gi|76809547|ref|YP_331785.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710b] gi|121600000|ref|YP_994076.1| exodeoxyribonuclease III [Burkholderia mallei SAVP1] gi|124386596|ref|YP_001028261.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10229] gi|126438610|ref|YP_001057228.1| exodeoxyribonuclease III [Burkholderia pseudomallei 668] gi|126449280|ref|YP_001081905.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10247] gi|126452249|ref|YP_001064469.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106a] gi|134284078|ref|ZP_01770772.1| exodeoxyribonuclease III [Burkholderia pseudomallei 305] gi|167001940|ref|ZP_02267730.1| exodeoxyribonuclease III [Burkholderia mallei PRL-20] gi|167717548|ref|ZP_02400784.1| exodeoxyribonuclease III [Burkholderia pseudomallei DM98] gi|167813690|ref|ZP_02445370.1| exodeoxyribonuclease III [Burkholderia pseudomallei 91] gi|167822205|ref|ZP_02453676.1| exodeoxyribonuclease III [Burkholderia pseudomallei 9] gi|167843799|ref|ZP_02469307.1| exodeoxyribonuclease III [Burkholderia pseudomallei B7210] gi|167892298|ref|ZP_02479700.1| exodeoxyribonuclease III [Burkholderia pseudomallei 7894] gi|167900793|ref|ZP_02487998.1| exodeoxyribonuclease III [Burkholderia pseudomallei NCTC 13177] gi|167909017|ref|ZP_02496108.1| exodeoxyribonuclease III [Burkholderia pseudomallei 112] gi|167917055|ref|ZP_02504146.1| exodeoxyribonuclease III [Burkholderia pseudomallei BCC215] gi|217424907|ref|ZP_03456403.1| exodeoxyribonuclease III [Burkholderia pseudomallei 576] gi|226194644|ref|ZP_03790239.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pakistan 9] gi|237810366|ref|YP_002894817.1| exodeoxyribonuclease III [Burkholderia pseudomallei MSHR346] gi|242317805|ref|ZP_04816821.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106b] gi|254177087|ref|ZP_04883744.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 10399] gi|254182229|ref|ZP_04888826.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1655] gi|254188156|ref|ZP_04894668.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pasteur 52237] gi|254196563|ref|ZP_04902987.1| exodeoxyribonuclease III [Burkholderia pseudomallei S13] gi|254203686|ref|ZP_04910046.1| exodeoxyribonuclease III [Burkholderia mallei FMH] gi|254208662|ref|ZP_04915010.1| exodeoxyribonuclease III [Burkholderia mallei JHU] gi|254260883|ref|ZP_04951937.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710a] gi|254295731|ref|ZP_04963188.1| exodeoxyribonuclease III [Burkholderia pseudomallei 406e] gi|254360283|ref|ZP_04976553.1| exodeoxyribonuclease III [Burkholderia mallei 2002721280] gi|52208247|emb|CAH34178.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei K96243] gi|52428396|gb|AAU48989.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 23344] gi|76579000|gb|ABA48475.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710b] gi|121228810|gb|ABM51328.1| exodeoxyribonuclease III [Burkholderia mallei SAVP1] gi|124294616|gb|ABN03885.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10229] gi|126218103|gb|ABN81609.1| exodeoxyribonuclease III [Burkholderia pseudomallei 668] gi|126225891|gb|ABN89431.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106a] gi|126242150|gb|ABO05243.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10247] gi|134244530|gb|EBA44634.1| exodeoxyribonuclease III [Burkholderia pseudomallei 305] gi|147745198|gb|EDK52278.1| exodeoxyribonuclease III [Burkholderia mallei FMH] gi|147750538|gb|EDK57607.1| exodeoxyribonuclease III [Burkholderia mallei JHU] gi|148029523|gb|EDK87428.1| exodeoxyribonuclease III [Burkholderia mallei 2002721280] gi|157806098|gb|EDO83268.1| exodeoxyribonuclease III [Burkholderia pseudomallei 406e] gi|157935836|gb|EDO91506.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pasteur 52237] gi|160698128|gb|EDP88098.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 10399] gi|169653306|gb|EDS85999.1| exodeoxyribonuclease III [Burkholderia pseudomallei S13] gi|184212767|gb|EDU09810.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1655] gi|217391927|gb|EEC31953.1| exodeoxyribonuclease III [Burkholderia pseudomallei 576] gi|225933345|gb|EEH29337.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pakistan 9] gi|237506823|gb|ACQ99141.1| exodeoxyribonuclease III [Burkholderia pseudomallei MSHR346] gi|238523636|gb|EEP87073.1| exodeoxyribonuclease III [Burkholderia mallei GB8 horse 4] gi|242141044|gb|EES27446.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106b] gi|243062348|gb|EES44534.1| exodeoxyribonuclease III [Burkholderia mallei PRL-20] gi|254219572|gb|EET08956.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710a] Length = 256 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 85/305 (27%), Gaps = 75/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++ N+N + + ++ +AD V +QE+ KV Sbjct: 2 LRVITANLNGIRSAAKKGFF---------------EWLGEQNADCVCVQEI-------KV 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + F L ++ A ++ ++G S A R Sbjct: 40 SADDLPAEFVEPHGLRSYFHHAQKKGYSGAGLYSRREP-----DDVIIGYGSSEFDAEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 VE K+ V+ +++ S D + L ++ Sbjct: 95 Y-----VEARFGKLSVVSVYVPSGSSGDERQQAKYRFMDEFMPHLAEL--------KAKR 141 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N + + + + + + + D R Sbjct: 142 EVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTKLFDDVGYVDVFRTLDPRPEQY 201 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY + S R + SDH P++ Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKNTSI-----------FRDIKFSDHAPLT 250 Query: 300 IDYDF 304 +DYD+ Sbjct: 251 VDYDY 255 >gi|152002965|gb|ABS19620.1| DNA lyase [Coccidioides posadasii] Length = 606 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 38/335 (11%), Positives = 75/335 (22%), Gaps = 78/335 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80 +RL +WN+N + W R + + + DI+ QE + + Sbjct: 2 PLRLTTWNVNGIRNPFSYQPW-----RENKSFERMFDILEG---DIIVFQETKIQKRDLR 53 Query: 81 AKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVR-------------KKNVRVLQQ 126 + W F+S +S +R Sbjct: 54 DDMVLIPGWDCFFSLPRHKKGYSGVVIYTRCSACSPIRAEEGLTGTLSSPGSPLPYRELP 113 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 +G + + + ++ G+ + +L+ + N + Sbjct: 114 EDDQIGGYPTPEQLELLPIDPVTIDSEGRCV-ILEFPAFVLLGVYCPANRDETRDVFRAA 172 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------------YLGNNDDF 224 L + V+ GD N + F Sbjct: 173 FLNVLDMRVRNLTAMGKRVVLMGDMNISREVIDSAHVIEAIRKGKTTETEFLSSPSRRLF 232 Query: 225 WKTIDPND-----------SLIRFPKEKDSRCNANKNL---------RNKIPIDYFVMDQ 264 + + L K R IDY + Sbjct: 233 NQLVGGGGARAKDSEDTPVLLDVCRKFHPDRLGMYTCWEQRVNARPGNYGARIDYVLCSV 292 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + + + G SDHCP+ Sbjct: 293 DMEDWFTESNIQ-----------EGLMGSDHCPVY 316 >gi|126310825|ref|XP_001378942.1| PREDICTED: similar to sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase) [Monodelphis domestica] Length = 614 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 42/320 (13%), Positives = 82/320 (25%), Gaps = 51/320 (15%) Query: 13 LVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 ++P S + +++ +N+N K L + D+ Sbjct: 173 VLPTMESESGSSVSLKV--FNLNC-------WAIPYMSKHQQVRMQHLGDLLNQKNFDLA 223 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 LQE+ S + K ++ + I + + V K+ + Sbjct: 224 LLQEVWSERDFESLRQKLLPNYTWA--------HYFRSGFIGSGLCVFSKHPIQEIFQHT 275 Query: 130 L-----LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + +++EI G + V HL + + + Sbjct: 276 FSLNGYPYKLHHGDWFCGKAVGMVVLEICGILVNVYVTHLHA-----EYNREHDSYLAHR 330 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDS 243 QA L +I +++GD N +G W +D + + + + Sbjct: 331 VAQAWELAQFIHHTSRRADVVLLSGDLNSHPGDVGYRLIKEWIGLDDSYLETQDFQGCED 390 Query: 244 RCNANKNLRNKI-----------PIDYFVMD---------QNAYKFLIQESFSEILYNED 283 C N IDY + + Sbjct: 391 GCTMVPNNCFVNSKEMESFPRGVRIDYILFKAISGFHITCDALTTTTGSGPNDTTGSGPN 450 Query: 284 DIKSRGKRLSDHCPISIDYD 303 D G LSDH + Sbjct: 451 DTTGHGLPLSDHEALMATLS 470 >gi|153004094|ref|YP_001378419.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5] gi|152027667|gb|ABS25435.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5] Length = 371 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 35/292 (11%), Positives = 67/292 (22%), Gaps = 66/292 (22%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 A A +R++S+N T D T + D++ LQE+ Sbjct: 126 SAPAHGAIALRVMSYNTW----------------ATNLDATRIASVVLRYRPDVLLLQEI 169 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + S + D+ AI R + Sbjct: 170 RGDV-------LSRFTEAASGLYAGAPLHLVYDPDLEQAIVSRYAIEPAASLARKG---- 218 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 ++++ G ++ V ++H S Q L D Sbjct: 219 ---------NVQKVVLCAPGARVTVFNVHPP-----------RSGGWRHRYTQISALVD- 257 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-- 252 P ++ GDFN + + + Sbjct: 258 -EDVLREDGPVILGGDFNAPDRSQLYERVSSALANAHAQRGLGFGFTYPALVRSPFGPVP 316 Query: 253 --NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ + SDH P+ ++ Sbjct: 317 TVPLVRIDHLFFSDHFVA-------------VRAGTLDDSGGSDHRPVFVEL 355 >gi|325282271|ref|YP_004254812.1| Endonuclease/exonuclease/phosphatase [Deinococcus proteolyticus MRP] gi|324314080|gb|ADY25195.1| Endonuclease/exonuclease/phosphatase [Deinococcus proteolyticus MRP] Length = 326 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 75/287 (26%), Gaps = 59/287 (20%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + L+++NI + T L + DAD+V LQE Sbjct: 97 PQPVPPGSLTLLTYNI---------------ARGTQGSAETLAAQIRAQDADLVTLQETN 141 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 ++A F ++ + + + + L Sbjct: 142 GWDA-----------EFTPELLRRLPGYHAAHTGAGGELLTLSRLPVLGSREVHLPET-- 188 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 RR + V+ ++ V+++H + P+ + + Q L+ Sbjct: 189 ------TRRFLVTTVQTPRGQLDVVNVHFSTVMVSGVFRGQVIPTRNRRATQLDRLQRET 242 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 Q ++AGDFN K ++ D+ + + Sbjct: 243 AQLPR----VLVAGDFNTPPRGRVYRALSGKFVNAWDAA------GQGFGFTFPSRLPAL 292 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ L + SDH + + Sbjct: 293 RIDHVFARG-----LQPLRAEVLPA----------GGSDHRGLRVVL 324 >gi|326917345|ref|XP_003204960.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like [Meleagris gallopavo] Length = 366 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 88/287 (30%), Gaps = 46/287 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 L++WNI+ L + Y D+VFLQE+ Sbjct: 117 SFSLITWNIDGLDLGN-----------LQERARGVCSYLTLYSPDVVFLQEV-------- 157 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + TA+ ++K V+VL+Q + Sbjct: 158 ---IPPYLCILQRRAGGYTIIPGNVDGYFTAMLLKKPRVKVLKQEIIRFPTT-----SMM 209 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + V I+G ++ ++ HL+S +Q Q + + + + + Sbjct: 210 RNLLVVHVNISGNELCLMTSHLEST----------RDHSKERMKQLQIVLNKMQE-ESES 258 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI------RFPKEKDSRCNANKNLRNKIP 256 + GD N + + + K I + R+ + S N + K+ Sbjct: 259 TTVIFGGDTNLRDSEVAKLGGLPKNITDVWEFLGKPQHCRYTWDTSSNTNLRIESKCKLR 318 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D A I + + G+ SDH + +D Sbjct: 319 FDRLYFRPAAEGGHI--IPRNMDLIGLEKLDCGRFPSDHWGLLCHFD 363 >gi|159906029|ref|YP_001549691.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C6] gi|159887522|gb|ABX02459.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C6] Length = 249 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 31/302 (10%), Positives = 80/302 (26%), Gaps = 77/302 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++SWN+N + + + DI+ +QE + Sbjct: 1 MKMISWNVNGIRACLKNGFM---------------NFLERESPDIMCIQETKVQSG-QVQ 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ +S I + G ++ R Sbjct: 45 LGLDGYFQYWNYAERKGYSGTAVFTKIKPNEVI--------------YGIGNNEHDGEGR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + ++++++ + + + L+ + Sbjct: 91 -----VITLKFDEYYLVNVYTPNSQRGLTRLEYRQKWDQDFLNYVKTLE--------NKK 137 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNANK 249 P + GD N + + + N + +E + + Sbjct: 138 PVIFCGDLNVAHKEVDLKNPKTNVKNAGFTPEERKGFDNIVNSGFLDTFREFNKEPDNYS 197 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF + ++ L D SDHCP+ I Sbjct: 198 WWSYRFNARARNIGWRIDYFCISESLRGNLK-----------DAFIMPEIMGSDHCPVGI 246 Query: 301 DY 302 + Sbjct: 247 IF 248 >gi|325474290|gb|EGC77478.1| exodeoxyribonuclease III [Treponema denticola F0402] Length = 256 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 80/304 (26%), Gaps = 84/304 (27%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------SYN 78 ++SWN+N + E + + D++ +QE S Sbjct: 3 SIISWNVNGIRAVEKKGF---------------LDWLNTENPDVLCVQETKAAKAQLSKE 47 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 P + ++++ + + + A+ K + ++ L D Sbjct: 48 LTEADLPNGKYFAYWASAKKAGY----------SGTAIFTKKEPLQVRTMGLKEFDDEGR 97 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 ++ + K+ ++ + + + + C + ++ Sbjct: 98 ----------VLVADFDKVSIISAYFPNSQDGGARLDYKLDFC-------AAILEFCDSV 140 Query: 199 KESLVPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 +E ++ GDFN YL + + F Sbjct: 141 QEEGNNVILCGDFNIAHKPIDLANPKSNEKNPGYLPEERAWMDEFTSSGYTDTFRHFCQE 200 Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + +DY ++ + + + + G SD Sbjct: 201 PAK-YTWWSYRFRAREKNIGWRLDYHCVNDSFLAKIKESIILD-----------GVMGSD 248 Query: 295 HCPI 298 HCP+ Sbjct: 249 HCPV 252 >gi|311696215|gb|ADP99088.1| endonuclease/exonuclease/phosphatase [marine bacterium HP15] Length = 286 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 32/286 (11%), Positives = 78/286 (27%), Gaps = 56/286 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEMGS 76 +RL+++NI + + + + + D+V LQE Sbjct: 38 IRLLTFNIQVGINTSSYRHYLTRSWQHILPHRNRIENLDRIASLLRGY--DVVALQECDG 95 Query: 77 YNAVAKVFPKNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + + + + + R+ + + + + + L G Sbjct: 96 GSLRSGYINQVQYLAEAAGIPYWYQQLNRNLGQIAQHSNGLLSRYRPLDVTEHKLPGL-- 153 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R A+ + ++ +HL + Q + L +I Sbjct: 154 ----IPGRGAIIARYGTEHDPLVLVLMHLSL----------------SKTAQQRQL-GYI 192 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + V+ GD N + D + ++ + R + Sbjct: 193 RELIADYRHVVLMGDMNA----HAEQLLTQTPLRETDLVPL-----PDTAHSFPSWRPEK 243 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 +D+ ++ + + +SDH PI++D Sbjct: 244 ALDHILVSPSLEIRRSEVV--------------SYPMSDHLPIAMD 275 >gi|170783171|ref|YP_001711505.1| putative nuclease [Clavibacter michiganensis subsp. sepedonicus] gi|169157741|emb|CAQ02943.1| putative nuclease [Clavibacter michiganensis subsp. sepedonicus] Length = 281 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 37/322 (11%), Positives = 86/322 (26%), Gaps = 84/322 (26%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +R+ S N N + + + + D DI+ +QE+ + + Sbjct: 2 PSNLRVASINTNGIRA---------------AFRKGMGDWLDTRDVDILAIQEVRAETSD 46 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + W + + +A+ + + + DS R Sbjct: 47 IEGLLGPEWNVLHDAATAKG----------RAGVAIASRRRAEIHRVAIGAEDFDSAGRW 96 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +E +++G + V+ ++ S + ++ + ++ + + E Sbjct: 97 -----LEADYDVDGTIVTVVSAYVHSGEVGTAKQDEK-------WRFLDGMEKRLPEIAE 144 Query: 201 SLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSR 244 V+ GD N L + + + + Sbjct: 145 HSELAVVVGDLNVGHRELDIRNWKGNVKRAGFLPRERAYLDRILGARGEDVTGVDGSTGP 204 Query: 245 C---------------NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILY 280 + IDY + + ++ Y Sbjct: 205 GLGWVDVGRQQAGEVDGPYTWWSWRGKAFDNDTGWRIDYQLATPALAEKVVG-------Y 257 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 D ++ KR SDH P+ +DY Sbjct: 258 AVDRAEAYDKRWSDHTPVVVDY 279 >gi|217035255|pdb|2VOA|A Chain A, Structure Of An Ap Endonuclease From Archaeoglobus Fulgidus gi|217035256|pdb|2VOA|B Chain B, Structure Of An Ap Endonuclease From Archaeoglobus Fulgidus Length = 257 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 77/306 (25%), Gaps = 77/306 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++N+N S ++ + K DI+ +QE N Sbjct: 2 LKIATFNVN----------------SIRSRLHIVIPWLKENKPDILCMQETKVENR---- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + I + S + +A+ KD Sbjct: 42 ------KFPEADFHRIGYHVVFSGSKGRNGVAIASLEEPEDVSFGLDSEPKDEDR----- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 L+ I V++ ++ +DS + Y Q + L ++ + + Sbjct: 91 -----LIRAKIAGIDVINTYVPQGFKIDSEKYQYK------LQWLERLYHYLQKTVDFRS 139 Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 V GD N + + K ++ + ++ Sbjct: 140 FAVWCGDMNVAPEPIDVHSPDKLKNHVXFHEDARRAYKKILELG--FVDVLRKIHPNERI 197 Query: 248 NKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + D + + + D ++ SDH P Sbjct: 198 YTFYDYRVKGAIERGLGWRGDAILATPPLAERCVDCYA-------DIKPRLAEKPSDHLP 250 Query: 298 ISIDYD 303 + +D Sbjct: 251 LVAVFD 256 >gi|118361193|ref|XP_001013827.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila] gi|89295594|gb|EAR93582.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila SB210] Length = 279 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 77/292 (26%), Gaps = 60/292 (20%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +K++ +S+N+ LR+ D D + LQE+ Sbjct: 34 EKLKFISYNVWF------------EKHNFEERNIELRKIFLQFDPDFICLQEVTQD---- 77 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 IF + + S+ + + K F Sbjct: 78 -----FLQLIFSDDQICDKYYFSSSSLVQAYDVLILSKYPI--------PFKCRYFPSEM 124 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + ++ IN I + HL+S + D Q ++D +ES Sbjct: 125 GRNLLFGVITINDIDISIGTTHLESIDYNDDY----------RLCQLTAIEDQFKSYQES 174 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 ++ GDFN N D ++ I D + Sbjct: 175 ----ILMGDFNFAKKSEDQNIPE----GYYDVWHALHPNEEGHTMQASQQYPSIRFDRII 226 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKR---------LSDHCPISIDYDF 304 + + L D + S + SDH + ++ F Sbjct: 227 ----LKQSENWKPSHIELIGRDPLPSYQSKQFAPFEIITPSDHYGLYLELSF 274 >gi|99078734|ref|YP_611992.1| endonuclease/exonuclease/phosphatase [Ruegeria sp. TM1040] gi|99035872|gb|ABF62730.1| Endonuclease/exonuclease/phosphatase [Ruegeria sp. TM1040] Length = 341 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 83/311 (26%), Gaps = 56/311 (18%) Query: 9 LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 L + + +R+ ++N + G+ L R + ADI Sbjct: 14 LFWTSASDAGPQSGTLRVATFNTELSRKGPGLLLRDLR--RGDDQIRAVVGTIVEAGADI 71 Query: 69 VFLQEMG------SYNAVAKVFPKNTWCIFYSTERLINHS-------------------K 103 + LQ + S A+ Y+ N Sbjct: 72 LALQGVDWDYDLYSLRALQHRLKGAGQDYPYAFAVRPNSGLASGLDLDGDGRLAEPEDSW 131 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLG-------------------AKDSFSRAGNR- 143 IA+ K+ ++ L D+ + A R Sbjct: 132 GWGQFTGQGGIALLSKHPIAASKAVNLTDMLWKDLPGHRMPVTLDGTLYPDAETAARLRL 191 Query: 144 -----RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 AV + +E NG+ +W+L H F + + + + L + + Sbjct: 192 SSTNHWAVPVTLE-NGQFLWILSFHAAPPVFDGAEDRNGRRNADEILIWTYLLDGTLDAQ 250 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-KIPI 257 PFV+ GD N +D + + L ++ ++ + + Sbjct: 251 IPD--PFVLMGDANNDPERGEGQNDAITRLLHHPRLQDVTPSDEAGQHSVIWDSTGPMRV 308 Query: 258 DYFVMDQNAYK 268 DY + Sbjct: 309 DYVLPSAGLSV 319 >gi|329941236|ref|ZP_08290515.1| exodeoxyribonuclease [Streptomyces griseoaurantiacus M045] gi|329299767|gb|EGG43666.1| exodeoxyribonuclease [Streptomyces griseoaurantiacus M045] Length = 267 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 79/309 (25%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 + + S N+N L + ++ AD++ LQE+ + Sbjct: 2 LTVTSVNVNGLRA---------------AARKGFVEWLAATSADVLCLQEVRAEPHQMPQ 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +V W + ++ + V + + P S Sbjct: 47 EVREPQGWHVVHAPAAAKGRAG-----------------VSLYTRREPDAVRVGFGSTEF 89 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + ++ G + V ++L S ++ + L+ + Sbjct: 90 DVSGRYVEADLPG--VTVASLYLPSGQVGTERQDEKYRFMDEFLAYLKELR---VRAAAE 144 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTID--PNDSLIRFPKEKDS 243 V+ GD+N + + +D + Sbjct: 145 GREVVVCGDWNIAHHEADLKNWRANTKNAGFLPEERAWLSRVLDAEDGGYVDVMRALHPE 204 Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + ID V + ++ + S +R SD Sbjct: 205 VEGPYTWWSYRGRAFDNDSGWRIDLAVATPGLARRAVKGFV-------ERAASHEERWSD 257 Query: 295 HCPISIDYD 303 H P+++ Y+ Sbjct: 258 HAPVTVVYE 266 >gi|225857433|ref|YP_002738944.1| exodeoxyribonuclease III [Streptococcus pneumoniae P1031] gi|225724673|gb|ACO20525.1| exodeoxyribonuclease III [Streptococcus pneumoniae P1031] Length = 275 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAKNADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K S+P +GA S R Sbjct: 55 KHVEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDLEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +V ++ + + ++ L + Sbjct: 114 I-----ITLEFDAFFVTQVYTPNAGDGLKRLEERQVWDAKYAEYLAEL--------DKEK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 VLEID 274 >gi|126730825|ref|ZP_01746634.1| extracellular nuclease [Sagittula stellata E-37] gi|126708541|gb|EBA07598.1| extracellular nuclease [Sagittula stellata E-37] Length = 1407 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 44/378 (11%), Positives = 81/378 (21%), Gaps = 89/378 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQ------------EGVSLWKNSVKRTTSDYTLLRQYAK 62 V +++ S+N+ + ++ + Sbjct: 1028 TTAPDVGGSLQVASYNVLNFFTTIDEGSNATGPNGDLDPRGADTADEFARQSAKIVDGII 1087 Query: 63 NLDADIVFLQEMGSYNA-----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 A+++ LQE+ + + + Y+ + I T I Sbjct: 1088 GTGAEVLALQEIENNGTTAIGTLVDLLNAEGTAATYAYVDPTGTGDFIGEDAITTGIIYD 1147 Query: 118 KKNVRVLQQSYPLLGAKDSF------------------SRAGNRRAVELLVE-INGKKIW 158 V +L Y + + NR +V E +G Sbjct: 1148 ASAVTLLHSEYLVYAEPSADATAAIAMDLASYIGGSFDDYQRNRPSVAATFEDASGNTFT 1207 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSL----------------------------------- 183 V+ H KS L Sbjct: 1208 VVSSHFKSKGPSGLDNLAGDAETWLTNNPGNANYTTVEGLLADLYADPNYDQGDGQGFWN 1267 Query: 184 --LSQQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 A L DWI + + + GD N D + F Sbjct: 1268 GVRLDAAVELADWIANTYDGGGTTNYALLGDMN-SYAEEDAVQYLDDNAGLVDLIDTFVP 1326 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG---------- 289 + + +D + D + + I +E + Sbjct: 1327 GGQDEAYSYVFDGQRGTLDQGLADTALAAHVTGAAEWHINADEPGLIGYDTSFNDPDFYN 1386 Query: 290 ---KRLSDHCPISIDYDF 304 SDH P+ DF Sbjct: 1387 DGVYASSDHDPLIFGLDF 1404 >gi|116328536|ref|YP_798256.1| exodeoxyribonuclease III [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331264|ref|YP_800982.1| exodeoxyribonuclease III [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116121280|gb|ABJ79323.1| Exodeoxyribonuclease III [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124953|gb|ABJ76224.1| Exodeoxyribonuclease III [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 254 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 71/269 (26%), Gaps = 58/269 (21%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L Y ++ D + QE A + P + W T + ++ +AV Sbjct: 19 LSDYIRDRKPDFICFQE---TKATQEQIPPSLWEEGGYT-----PVFHSAEKKGYSGVAV 70 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 K +G D F R + + + + + S + + Sbjct: 71 LYKKPP----QKITIGLGDPFFDKEGRS-----IYLEYPDFALWNSYFPSGTTGEVRQAV 121 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT-------ID 229 L ++A ++++ ++ GD N +D + Sbjct: 122 KMKFLDLFQKEAA-------KRRKKQPNILLCGDINIAHTPQDIHDPKGNAKSSGFLPEE 174 Query: 230 PNDSLIRFPKEKDSRCNA-------NKNLRNK---------IPIDYFVMDQNAYKFLIQE 273 K + IDYF + K + + Sbjct: 175 REWLTQFLEKGWVDTFRYLYPEKQEYSWWTFRAGARAKNKGWRIDYFFVTAELKKNVKSQ 234 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302 S R K LSDH P+ ++ Sbjct: 235 SI-----------YRDKPLSDHAPLELEI 252 >gi|299145528|ref|ZP_07038596.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] gi|298516019|gb|EFI39900.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] Length = 289 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 33/288 (11%), Positives = 71/288 (24%), Gaps = 50/288 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+ ++N+ + T+ + Q K+ D +I +E Sbjct: 44 SMRVATYNLQ-----------VETGTGWTNRRERVAQLIKDYDFEICGFEEASWEQ--RS 90 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-KKNVRVLQQSYPLLGAKDSFSRA- 140 + + D+ + I + + + + G D S Sbjct: 91 YLGTQLASDYQILAYGRDTGNDDNKAGEMSGILYKKSRYTLLDAGRFWFSGTPDIPSNGW 150 Query: 141 ----GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R V + + + ++ Q L D ++ Sbjct: 151 DETNFKRFCVWGKFKDSKTQKEFYLFETHMPLADNA-----------RKHACQMLVDAVS 199 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 K + P GDFN + + + + K Sbjct: 200 DKAKDNTPAFCTGDFNATPDAPEIATTICQ---SGILKDAYREAAVQHGALFTFPSKKTR 256 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP--ISIDY 302 ID+ + + + + LSDH P I ++ Sbjct: 257 IDFIFV----------KHATVLSTRTIVSS-----LSDHYPMVIVVEI 289 >gi|296118910|ref|ZP_06837483.1| 5'-nucleotidase family protein [Corynebacterium ammoniagenes DSM 20306] gi|295968008|gb|EFG81260.1| 5'-nucleotidase family protein [Corynebacterium ammoniagenes DSM 20306] Length = 901 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 30/287 (10%), Positives = 78/287 (27%), Gaps = 46/287 (16%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGS-----------YNAVAKVFPKNTWCIFYSTERLI 99 + L+AD++ L E+ A++ + Sbjct: 537 QDQQEKIVSAINGLNADVIALSEIEDTFAVTGDIARRDEALSTLVDALNADGGNWKYVES 596 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI-- 157 + + I A V + +S +D R + + + + Sbjct: 597 PQQVPNDPDVIRVAFIYNPDRVEPVGESRIF---EDERFTGTAREPLAQEFKPVDEDVTE 653 Query: 158 WVLDIHLKSFC-----FLDSLENTYS-PSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGD 210 + + D+ + + +L QA+ + D + ++ + + GD Sbjct: 654 TFVAVANHFKSKGSIAGGDADQGDGQGNNANLRVSQAEAVLDHLAKQSDWQDKATFVMGD 713 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 N + + ++ + + + +D+ + + N + Sbjct: 714 LNSYTREHAIDT------FRDAGYSIPQEDHQAAT-SYQFDGMLGSLDHVLANAN--VEV 764 Query: 271 IQESFSEILYNEDDIKSRGKRL--------------SDHCPISIDYD 303 I +E +RL SDH P+ + ++ Sbjct: 765 QDAQVWNINADESIAFEYSRRLYNVVDYHDDSPFRSSDHDPVKVGFN 811 >gi|240102422|ref|YP_002958731.1| Metal-dependent hydrolase [Thermococcus gammatolerans EJ3] gi|239909976|gb|ACS32867.1| Metal-dependent hydrolase [Thermococcus gammatolerans EJ3] Length = 584 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 84/308 (27%), Gaps = 65/308 (21%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M V+AL + + + ++N++ + L Sbjct: 335 MASIVVMALFHAGPTYMGAKKDVL-VWTYNVHQGFGPYDGTFNGY----------ELVNL 383 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKK 119 DI F QE+ + + + ++ + IAV Sbjct: 384 LAEQKPDIWFAQEVVGG-----MIGNGYQDVPLFVSAHLGYAYEYKPAVEGTYGIAVFSH 438 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 + L R A ++ +E G I V+++H+ Sbjct: 439 WHMKTESELNLPSVG------EARPAQKVSIEELG--ITVVNVHMGL------------- 477 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 S + QA+ L + + S V VIAGD N + N Sbjct: 478 SEEERAMQAEELLKFA---EASPVAQVIAGDTNAEPNERAIEILTR---------DYRDA 525 Query: 240 EKDSRCNANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + RN K IDY ++ + + DD +SDH Sbjct: 526 FPERPPYTFLWERNGVVDKENIDYILLKNDWPAEVK-----------DDGCLCDVLVSDH 574 Query: 296 CPISIDYD 303 P+ + Sbjct: 575 RPVWAVIE 582 >gi|167033635|ref|YP_001668866.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida GB-1] gi|166860123|gb|ABY98530.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida GB-1] Length = 257 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 35/286 (12%), Positives = 76/286 (26%), Gaps = 56/286 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----GSYNA 79 + +++ N++ LR+ + AD+VFLQE+ + Sbjct: 21 LNVLTLNVHKGFTFFNRRF----------ILPELREAVRATGADLVFLQEVHGSHQQHAQ 70 Query: 80 VAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +P+ F + + + A+ K S Sbjct: 71 RHAAWPETPQYEFLADSMWPQFAYGRNAVYPHGDHGNALLSKFPI-----SHFNNLDVSV 125 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R + +E+ G V + + + +Q + D + Sbjct: 126 QGNEQRGLLHCQLEVPGHD-QVHAVCVHLGLR-----------EAHRQRQVTLMLDLLAS 173 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 P ++AGDFN W+ + + + + Sbjct: 174 -LPPQAPVIVAGDFND-----------WRLKADAVLCEHLIEAFGKPARSFPARLPLLRL 221 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + + + + K LSDH P++ + + Sbjct: 222 DRIYLRNA-----VPGAAQVLS------KYPWSHLSDHVPLAAEIN 256 >gi|58583508|ref|YP_202524.1| hypothetical protein XOO3885 [Xanthomonas oryzae pv. oryzae KACC10331] gi|188575228|ref|YP_001912157.1| endonuclease/exonuclease/phosphatase [Xanthomonas oryzae pv. oryzae PXO99A] gi|58428102|gb|AAW77139.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|188519680|gb|ACD57625.1| endonuclease/exonuclease/phosphatase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 255 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 41/295 (13%), Positives = 85/295 (28%), Gaps = 60/295 (20%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVF 70 AS ++ +R+++ NI S S + + + DIV Sbjct: 3 ASDSRILRVLTANIQAGSSTRRYSDYVTRSWSHALPLGSKRTSLDSIAALVGER--DIVG 60 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYP 129 LQE + + + + + +H R +A + K + Q + Sbjct: 61 LQEADPGSLRSGFTNQTHYLAERAGFDYWSHQPNRRMGGVASSANGLLSKLEPLEVQDHA 120 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 L G R G R + + V HL + Q Sbjct: 121 LPG------RIGGRGILLAKFGEGRDGLAVAVAHLSLG-------------ANSRMAQLA 161 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC--NA 247 ++ + ++ + ++ GDFN + L R + + C + Sbjct: 162 FIAELLSDHPNA----MLMGDFNCMADRPEMQS-----------LYRHTRLQPPSCEVHT 206 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + R ID+ ++ + + ++ SDH + +D Sbjct: 207 FPSWRPDRAIDHILVSDSL--------------VIEHTEAIPAAFSDHLAVGMDI 247 >gi|321459337|gb|EFX70391.1| hypothetical protein DAPPUDRAFT_328284 [Daphnia pulex] Length = 560 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 41/328 (12%), Positives = 84/328 (25%), Gaps = 56/328 (17%) Query: 24 VRLVSWNINTLSEQEGV-------SLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 R+V++NI + L+ + +ADI+ LQE+ Sbjct: 241 FRVVTYNILADLYTDSEYTRKVLHPYCPPYALAIDYRKQLILKELIGYNADIICLQEVDG 300 Query: 77 ---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + +F + +S + + V + + ++ Sbjct: 301 KVFDSDLKPIFSSLGFGAEFSKKGGQVSEGMTCLFNTSKFRLVESCSHILAEELPKNPLV 360 Query: 134 KDSF--------------SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL-----E 174 D + R + + L NGK++ V + HL D + Sbjct: 361 NDLWEAVKKNEDLSKRIIDRTTSCHLLVLESLFNGKRVVVANTHLYFHPNADHIRLLQSC 420 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + +L + Q + V + GDFN + ID ++ Sbjct: 421 VALRLAQNLRNCQLE---------LGKEVSLLFCGDFNSTPGSGVFELMTLQHIDHDNEA 471 Query: 235 I-----------------RFPKEKDSRCNANKNLRNKIPIDYFVMDQN-AYKFLIQESFS 276 + N +DY +++ + S Sbjct: 472 WSSKPEEAVRDLSLHNPIAMETACGTPPFTNYTSGFSGCLDYIFFEKSKLVVEQVVPLPS 531 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYDF 304 SDH + D + Sbjct: 532 LEEVTRHCALPSIVFPSDHIALIADLKW 559 >gi|323699266|ref|ZP_08111178.1| exodeoxyribonuclease III [Desulfovibrio sp. ND132] gi|323459198|gb|EGB15063.1| exodeoxyribonuclease III [Desulfovibrio desulfuricans ND132] Length = 255 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 74/301 (24%), Gaps = 72/301 (23%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + SWN+N R + D+V LQE + Sbjct: 3 IYSWNVNGYRAVLKKDF---------------RDWLDGCGGDVVMLQETKVEPDQLALDE 47 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + ++ +A + G D R R Sbjct: 48 REPDSFSNHYWNWSKK------KKGYSGVACFANPEPIR----WDTGLPDDRFRDEGR-- 95 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++ + + +I+ + D + + AQ L+ P Sbjct: 96 ---VLHLEYPDFHLFNIYFPNGQMSDERLDFKMGFYDTFLEHAQALRR--------TKPI 144 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANKNL 251 V+ GDFN + + + + + + + Sbjct: 145 VVGGDFNTAHREIDLKNPKANSERSGFLPVERAWIDKFIEHGYVDTFRLFEDGPHHYSWW 204 Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + IDYF + + +++ + SDHCPI ++ Sbjct: 205 SYRFNARKNNAGWRIDYFFVSEELKDKVVRAWIEPDVL-----------GSDHCPIGVEI 253 Query: 303 D 303 D Sbjct: 254 D 254 >gi|312843088|gb|ADR02759.1| XthA [Treponema pallidum subsp. pertenue] gi|313505178|gb|ADR64329.1| exodeoxyribonuclease III [Treponema pallidum subsp. pertenue] gi|313505198|gb|ADR64348.1| exodeoxyribonuclease III [Treponema pallidum subsp. pertenue str. Gauthier] gi|313505297|gb|ADR64434.1| exodeoxyribonuclease III [Treponema pallidum] Length = 264 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 31/302 (10%), Positives = 73/302 (24%), Gaps = 69/302 (22%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAKV 83 R++SWN+N + E + D++ LQE+ + ++ Sbjct: 6 RIISWNVNGIRAIERKDF---------------LSWLAREAPDVLCLQEIKAHESQLSAA 50 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 W + ++ A+ K + + + R Sbjct: 51 LRAPVWSAGAGGTYY--TYFHSAQRPGYSGTALFSKRAPDAVRFFGVPAFDCEGRMLAAR 108 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ V+ + + C + + +++ + Sbjct: 109 F----------GELTVVSAYFPNAQEGGKRLAYKLDFC-------AAFRAFCDEERTAGQ 151 Query: 204 PFVIAGDFNRKINYLG--------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GD+N + + W + + Sbjct: 152 HVILCGDYNIAHKEIDLAHPQENEGNPGFLPQERAWMDTFTEAGYADSFRAFCTEGQQYT 211 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY +DQ + + SDHCP+ + Sbjct: 212 WWSYRARARARNIGWRIDYQCVDQAFLARVTSSQILSEVT-----------GSDHCPVCL 260 Query: 301 DY 302 Y Sbjct: 261 TY 262 >gi|156095775|ref|XP_001613922.1| sphingomyelin phosphodiesterase [Plasmodium vivax SaI-1] gi|148802796|gb|EDL44195.1| sphingomyelin phosphodiesterase, putative [Plasmodium vivax] Length = 753 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 67/219 (30%), Gaps = 40/219 (18%) Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 + V K+ + + + K + A+ L +N K + V+ HL++ D Sbjct: 510 GVIVLSKHAFMHKHALIYSNCKFP-DMFCTKGAIYLKCCVNNKPVNVIATHLQAGDTSDQ 568 Query: 173 LENTYSPSCSLLSQQAQWLKDWI-----TQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 +Q L +W+ + + P GDFN + + F + Sbjct: 569 QN--------CRWKQLNELSNWVYNGAPSFHIKKNEPLFFVGDFNIRYHLD--KSFFDRV 618 Query: 228 IDPNDSLIRFPKEKDSRCNANK------------NLRNKIPIDYFVMDQNAYKF-LIQES 274 + K+ + + + +DY +++ ++ L+ ++ Sbjct: 619 LSSGCLNSSVTKKALETTYDSYLNDYCMHMERDYSFKYNYTLDYILVNNDSDVKTLVPQT 678 Query: 275 FSEILYN-----------EDDIKSRGKRLSDHCPISIDY 302 + Y + SDH PI + Sbjct: 679 AIQKDYRPIQIIKSLLGFIPYKCTYIHHPSDHFPIYATF 717 Score = 42.2 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 33/97 (34%), Gaps = 2/97 (2%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + ++S+N+ LS + N R + + + DI+ L E+ + N Sbjct: 11 TLTIMSYNVQMLSVPLSNQI--NLSTRQDAVIDYICSLDDLHNIDILVLNEVFTSNCYDM 68 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 + F +I + + + V++ Sbjct: 69 LTKGKVKDKFPYHTNVIGTKCQGPEKWSSSIVEVKED 105 >gi|40538842|ref|NP_848783.3| 2',5'-phosphodiesterase 12 [Mus musculus] gi|172044638|sp|Q3TIU4|PDE12_MOUSE RecName: Full=2',5'-phosphodiesterase 12; Short=2'-PDE; Short=2-PDE gi|39963618|gb|AAH64450.1| RIKEN cDNA E430028B21 gene [Mus musculus] Length = 608 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 82/314 (26%), Gaps = 33/314 (10%) Query: 24 VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R VS+NI S L+++ +AD++ LQE+ Sbjct: 294 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDR 353 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + P R+ H + + + L + Sbjct: 354 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFRLLSQHDISFQEALKSDPLHKEL 413 Query: 136 SFSRAGNRRAVELLVEINGK-KIWVLDIHLKSF---CFLDSLENTYSPSCSLLSQQAQ-- 189 A N A E +++ + +I VL S C ++ + + Q + Sbjct: 414 LEKLALNPLAQEKVLQRSSVLQISVLQSTTDSSKKICVANTHLYWHPKGGYIRLIQMEVA 473 Query: 190 -WLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPNDSLIR 236 +++ +P + GDFN + + D + S+ Sbjct: 474 LVHIRHVSRDLYPGIPVIFCGDFNSTPSTGMYHFVISGSIAEDHEDWASNGEEERCSMPL 533 Query: 237 FPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGK 290 K N +DY +D + S Sbjct: 534 SHCFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNTLEVEQVIPLPSHEEVTTHQALPSVS 593 Query: 291 RLSDHCPISIDYDF 304 SDH + D + Sbjct: 594 HPSDHIALVCDLKW 607 >gi|26350127|dbj|BAC38703.1| unnamed protein product [Mus musculus] Length = 608 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 82/314 (26%), Gaps = 33/314 (10%) Query: 24 VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R VS+NI S L+++ +AD++ LQE+ Sbjct: 294 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDR 353 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + P R+ H + + + L + Sbjct: 354 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFRLLSQHDISFQEALKSDPLHKEL 413 Query: 136 SFSRAGNRRAVELLVEINGK-KIWVLDIHLKSF---CFLDSLENTYSPSCSLLSQQAQ-- 189 A N A E +++ + +I VL S C ++ + + Q + Sbjct: 414 LEKLALNPLAQEKVLQRSSVLQISVLQSTTDSSKKICVANTHLYWHPKGGYIRLIQMEVA 473 Query: 190 -WLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPNDSLIR 236 +++ +P + GDFN + + D + S+ Sbjct: 474 LVHIRHVSRDLYPGIPVIFCGDFNSTPSTGMYHFVISGSIAEDHEDWASNGEEERCSMPL 533 Query: 237 FPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGK 290 K N +DY +D + S Sbjct: 534 SHCFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNTLEVEQVIPLPSHEEVTTHQALPSVS 593 Query: 291 RLSDHCPISIDYDF 304 SDH + D + Sbjct: 594 HPSDHIALVCDLKW 607 >gi|71991697|ref|NP_493169.2| hypothetical protein T27F6.6 [Caenorhabditis elegans] gi|33302616|sp|O45870|NSMA_CAEEL RecName: Full=Putative neutral sphingomyelinase gi|31441797|emb|CAB04885.2| C. elegans protein T27F6.6, confirmed by transcript evidence [Caenorhabditis elegans] Length = 434 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 92/322 (28%), Gaps = 50/322 (15%) Query: 11 FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 F + A+++R+V+ N L + W + QY + DIV Sbjct: 26 FAALRRNNVAARQLRVVTLNAWCLPQP-----WPIGSTDRVHRLNKIGQYMIDELYDIVG 80 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 LQE+ SY ++ + S+ H + R V L Y L Sbjct: 81 LQELWSYYDFVRLSEQ------VSSVYPYFHYFHSGFTGSGVCVFSRHPIVSTLTNRYSL 134 Query: 131 LGAKDSFSRAGNRRAVEL---LVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 G R + +EI+G ++ HL + + + Sbjct: 135 NGFAHHIHRGDWFGGKVVGLTEIEIDGDLRVNFYTTHLHA-----EYDRENDLYLPHRTA 189 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKI---------------------NYLGNNDDFW 225 QA L ++ ++ GD N + + + N D Sbjct: 190 QAFELAQFVRHTARGADVVIVTGDLNMEPCDLGFRLILSHAKLFDAWRMSHEVENEDSEG 249 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKI---PIDYFVM-DQNAYKFLIQESFSEILYN 281 + + ++ C + L+N IDY + L + + Sbjct: 250 ELLKFRGIAKGGTCDRPDNCYTKRALKNVDDSKRIDYMLFKSGRCNVKLEECEITL---- 305 Query: 282 EDDIKSRGKRLSDHCPISIDYD 303 + I SDH + + Sbjct: 306 -NQIPGEDLNYSDHVGLRARFT 326 >gi|163938364|ref|YP_001643248.1| endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis KBAB4] gi|163860561|gb|ABY41620.1| Endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis KBAB4] Length = 263 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 75/269 (27%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS--------- 102 L + + D D++ LQE+ V F + Sbjct: 18 EKIKYLAKAIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELRALNVKEYNII 77 Query: 103 ---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ V + ++ + KD+ R+ V + N K I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNIVKEDTFFVSENKDTTYWK-TRKIVSATIAYNDKNITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKDQVDRLMERVN----SNELSFLMGDFNNNARLEG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +Q+ + Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKQNLRIDLILSNQSKTVNSSKVI 242 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ N +SDH + + D Sbjct: 243 FNGTNRNV---------ISDHFGVEVQLD 262 >gi|330818664|ref|YP_004362369.1| Endonuclease/exonuclease/phosphatase family protein [Burkholderia gladioli BSR3] gi|327371057|gb|AEA62413.1| Endonuclease/exonuclease/phosphatase family protein [Burkholderia gladioli BSR3] Length = 257 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 84/305 (27%), Gaps = 74/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++ N+N + + + + AD V +QE+ KV Sbjct: 2 LRVITANLNGIRSAAKKGFF---------------DWLGDQKADCVCVQEI-------KV 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + F + H A ++ ++G S + R Sbjct: 40 SADDLPPEFAAPHGFTGHFHHAEKKGYSGAGLYTRREP-----DDLIIGYGSSEFDSEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 VE K+ V+ +++ S + + + L K Sbjct: 95 Y-----VEARYGKLSVISVYVPSGSSGEERQQAKFRFMAEFMPHLAEL-------KAKKR 142 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N + + + + + + D R + Sbjct: 143 EVILCGDVNIVHKEIDIRNWKSNQKNSGCLPEERAWLTQLFDEVGYVDVFRTLDPRPDQY 202 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY + Q S R + SDH P++ Sbjct: 203 TWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKQTSI-----------FRDIKFSDHAPLT 251 Query: 300 IDYDF 304 +DYD+ Sbjct: 252 VDYDY 256 >gi|296470685|gb|DAA12800.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Bos taurus] Length = 514 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 83/331 (25%), Gaps = 71/331 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +RLVSWNIN + + + + + LDADIV LQE + Sbjct: 2 LRLVSWNINGIRSPLQGVRCEEPSSCSAM---AMGRILDKLDADIVCLQETKVTRDVLTE 58 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKDS 136 + + ++S R + + +A V + G D Sbjct: 59 PLAIIEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLSTQNGDVGCYGNMDD 118 Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLL 184 F++ R E K + +++++ LL Sbjct: 119 FTQEELRALDSEGRALLTQHKICTWEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLL 178 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230 +A+ L + +I GD N + Sbjct: 179 QIRAEALLA-------AGSHVIILGDLNTAHRPIDHWDAVNMECFEEDPGRKWMDGLLSN 231 Query: 231 NDSLIRFPKEK------------------DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 S + ++L +DY + D+ Q Sbjct: 232 LGCESGSHMGPFIDSYRCFQPKQKGAFTCWSTVSGARHLNYGSRLDYVLGDRTLVIDTFQ 291 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 SF SDHCP+ Sbjct: 292 SSF----------LLPEVMGSDHCPVGAVLS 312 >gi|219683204|ref|YP_002469587.1| exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis AD011] gi|241191164|ref|YP_002968558.1| exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196570|ref|YP_002970125.1| exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis DSM 10140] gi|219620854|gb|ACL29011.1| possible exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis AD011] gi|240249556|gb|ACS46496.1| exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251124|gb|ACS48063.1| exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289177272|gb|ADC84518.1| Exodeoxyribonuclease III [Bifidobacterium animalis subsp. lactis BB-12] gi|295794157|gb|ADG33692.1| exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis V9] Length = 286 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 34/275 (12%), Positives = 72/275 (26%), Gaps = 42/275 (15%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS-----NNDIHTA 113 +AK ++ +QE + + + ++ + + + Sbjct: 23 HWAKAHTPNVWCMQETRAPQEIIADIYGELAADYVHAGKIASPEELHTLVDVCRIKGRAG 82 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 + + + + +D S R + G I V+ +++ + +D Sbjct: 83 VGMISDMPVLETRVGLPGLEEDVDS---GRWIEADVRTEQGYVITVVCVYVHAGGLVDDP 139 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------Y 217 + L + ++ + V+ GDFN N + Sbjct: 140 KEAQK--YRFLDTMTERMQQLQDEAASGGRQAVVCGDFNIAHNPIDLKNPKSNENNNGYF 197 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYK 268 K ID D + + +DY + Sbjct: 198 PRERAYMDKWIDQMDYVDVMRDLAGDIQGPYTWWSQRGRAFDNDSGWRLDYQFATPELAQ 257 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + D S R SDH P++I YD Sbjct: 258 QARG-------FVVDRASSYDSRWSDHAPLTISYD 285 >gi|168008755|ref|XP_001757072.1| predicted protein [Physcomitrella patens subsp. patens] gi|162691943|gb|EDQ78303.1| predicted protein [Physcomitrella patens subsp. patens] Length = 536 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 83/303 (27%), Gaps = 58/303 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +R+ SWN+N L ++ + + L+ADIV QE + K Sbjct: 82 MRIFSWNVNGLRTTLKDVAACHTSASN--------YFCQVLNADIVCFQEAKIQEEKLEK 133 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 ++S K S + A+ + + + + Sbjct: 134 WIA--CVDGYHSHWAFSREKKGYSGVVTYVKEAL---SPLDAKADWLGENSSAEDLCNEG 188 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + +L++++ + D P + + L+ S Sbjct: 189 RL-----MCTDHGSFVLLNVYVPNSGDGD----KGRPRLDFKMRYLKALEQTCDDLVRSG 239 Query: 203 VPFVIAGDFNRKIN--------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 VI GDFN L + + + + N Sbjct: 240 KHIVIVGDFNVAHKDIDVHSRWKVEEIYSLEEREWLDGFLSR--YIDLYRHFHPDEKNIF 297 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 K IDY + ++ ++ E DI K+ SDH + Sbjct: 298 SVWDQKSDARTRNEGLRIDYAICNEGFLTEVL----------ETDIVKMQKQWSDHAAVV 347 Query: 300 IDY 302 + Sbjct: 348 VTL 350 >gi|90579026|ref|ZP_01234836.1| hypothetical protein VAS14_04953 [Vibrio angustum S14] gi|90439859|gb|EAS65040.1| hypothetical protein VAS14_04953 [Vibrio angustum S14] Length = 379 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 39/375 (10%), Positives = 92/375 (24%), Gaps = 86/375 (22%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + Q +R+ +N+ SE E +++ + T + L ++++AD++ L Sbjct: 4 FLATVLETKQSLRVAMFNVAM-SEPEQGRIFQQTSGLTHKRFQRLAAIIQHVNADVLLLC 62 Query: 73 EMGSYN--AVAKVFPKNTWCIFYSTERLINHSKR-------------------------- 104 E ++ + Sbjct: 63 EFDHPGNGGDDGSLDNFCQHYLSHSQYQQSAIDYPYRYCPSSNTGLITEIDLNGDGVCTL 122 Query: 105 ------DSNNDIHTAIAVRKKNVR----------VLQQSYPLLGAKDSFSRAGNRRAV-- 146 H + K L + P + + + Sbjct: 123 PEDAQGYGEFHGHFGFVILSKYPLQQENIRTWQHFLWKDMPNNLMPVDYYSKEAQHILRL 182 Query: 147 ------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD---WITQ 197 + + + K+I +L H F S + + + D + Sbjct: 183 SSKNHVVVPIVVEDKEINLLCCHPTPPVFDGSERRNAKRNHDEIQFLIDIINDESYLVDD 242 Query: 198 K-----KESLVPFVIAGDFNRKINYLGNNDDFWKTI-----------------DPNDSLI 235 + F++ GD N I+ K + + Sbjct: 243 NGQVGGLKPDDAFIVMGDLNADIDDGDGFKAAIKHLLKLDKINTRVSSGKQTPKSEGARH 302 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD-------IKSR 288 +P +K + + +DY + +N + F ++ + + Sbjct: 303 YYPWQKRTGRKNEWTHLAGLRLDYVLPSKNL-DVIETGVFWPDKHDSLRELILDCKGREK 361 Query: 289 GKRLSDHCPISIDYD 303 SDH + D + Sbjct: 362 PSAGSDHRMVWADIN 376 >gi|61554419|gb|AAX46554.1| apurinic/apyrimidinic endonuclease 2 [Bos taurus] Length = 407 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 83/331 (25%), Gaps = 71/331 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +RLVSWNIN + + + + + LDADIV LQE + Sbjct: 2 LRLVSWNINGIRSPLQGVRCEEPSSCSAM---AMGRILDKLDADIVCLQETKVTRDVLTE 58 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKDS 136 + + ++S R + + +A V + G D Sbjct: 59 PLAIIEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLSTQNGDVGCYGNMDD 118 Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLL 184 F++ R E K + +++++ LL Sbjct: 119 FTQEELRALDSEGRALLTQHKICTWEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLL 178 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230 +A+ L + +I GD N + Sbjct: 179 QIRAEALLA-------AGSHVIILGDLNTAHRPIDHWDAVNMECFEEDPGRKWMDGLLSN 231 Query: 231 NDSLIRFPKEK------------------DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 S + ++L +DY + D+ Q Sbjct: 232 LGCESGSHMGPFIDSYRCFQPKQKGAFTCWSTVSGARHLNYGSRLDYVLGDRTLVIDTFQ 291 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 SF SDHCP+ Sbjct: 292 SSF----------LLPEVMGSDHCPVGAVLS 312 >gi|62751813|ref|NP_001015577.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Bos taurus] gi|73921675|sp|Q5E9N9|APEX2_BOVIN RecName: Full=DNA-(apurinic or apyrimidinic site) lyase 2; AltName: Full=APEX nuclease 2; AltName: Full=Apurinic-apyrimidinic endonuclease 2; Short=AP endonuclease 2 gi|59858127|gb|AAX08898.1| apurinic/apyrimidinic endonuclease 2 [Bos taurus] Length = 514 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 83/331 (25%), Gaps = 71/331 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +RLVSWNIN + + + + + LDADIV LQE + Sbjct: 2 LRLVSWNINGIRSPLQGVRCEEPSSCSAM---AMGRILDKLDADIVCLQETKVTRDVLTE 58 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKDS 136 + + ++S R + + +A V + G D Sbjct: 59 PLAIIEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLSTQNGDVGCYGNMDD 118 Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLL 184 F++ R E K + +++++ LL Sbjct: 119 FTQEELRALDSEGRALLTQHKICTWEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLL 178 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230 +A+ L + +I GD N + Sbjct: 179 QIRAEALLA-------AGSHVIILGDLNTAHRPIDHWDAVNMECFEEDPGRKWMDGLLSN 231 Query: 231 NDSLIRFPKEK------------------DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 S + ++L +DY + D+ Q Sbjct: 232 LGCESGSHMGPFIDSYRCFQPKQKGAFTCWSTVSGARHLNYGSRLDYVLGDRTLVIDTFQ 291 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 SF SDHCP+ Sbjct: 292 SSF----------LLPEVMGSDHCPVGAVLS 312 >gi|49183387|ref|YP_026639.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Sterne] gi|165870723|ref|ZP_02215376.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0488] gi|167634744|ref|ZP_02393063.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0442] gi|167641246|ref|ZP_02399499.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0193] gi|170688988|ref|ZP_02880189.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0465] gi|170707115|ref|ZP_02897571.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0389] gi|177654552|ref|ZP_02936408.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0174] gi|190567531|ref|ZP_03020444.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis Tsiankovskii-I] gi|227813041|ref|YP_002813050.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. CDC 684] gi|254686762|ref|ZP_05150620.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. CNEVA-9066] gi|254724838|ref|ZP_05186621.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A1055] gi|254739015|ref|ZP_05196717.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Western North America USA6153] gi|254744602|ref|ZP_05202281.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Kruger B] gi|254756141|ref|ZP_05208170.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Vollum] gi|254761959|ref|ZP_05213808.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Australia 94] gi|49177314|gb|AAT52690.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Sterne] gi|164713557|gb|EDR19081.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0488] gi|167510754|gb|EDR86147.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0193] gi|167529818|gb|EDR92566.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0442] gi|170127893|gb|EDS96764.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0389] gi|170667089|gb|EDT17851.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0465] gi|172080664|gb|EDT65747.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0174] gi|190561318|gb|EDV15290.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis Tsiankovskii-I] gi|227005247|gb|ACP14990.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. CDC 684] Length = 263 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 76/269 (28%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 18 EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ V + ++ + KD+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ L Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEELFKGQVNRLMERVD----SNELSFLMGDFNNNARLQG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +++ + Sbjct: 183 EGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKIRSSKVV 242 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ +SDH + + D Sbjct: 243 FNGTNRKI---------ISDHFGVEVQVD 262 >gi|258546221|ref|ZP_05706455.1| exodeoxyribonuclease III [Cardiobacterium hominis ATCC 15826] gi|258518646|gb|EEV87505.1| exodeoxyribonuclease III [Cardiobacterium hominis ATCC 15826] Length = 253 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 81/302 (26%), Gaps = 74/302 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + SWN+N+L+ + QY K DI+ LQE+ +A Sbjct: 1 MNITSWNVNSLN----------------VRLPHVLQYLKETAPDILGLQELKQTDAA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 I + + + +A+ + + G D +RA Sbjct: 42 -------IDRTALAAAGYHLESHGQKTYNGVALLAREALTDVVRG-IPGYADEQARA--- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + N + VL++++ + + + TY + +I K Sbjct: 91 ------IAANVGDVRVLNLYVPNGKAVGDEKYTYK------LHWLDAVTRYIDDLKREHP 138 Query: 204 PFVIAGDFNRKINYLGNND---DFWKTI-----------DPNDSLIRFPKEKDSRCNANK 249 VI GD+N L +D + + + Sbjct: 139 KLVIIGDYNIAPADLDVHDPDKWRDQILCSAPERQALANLLALGFKDAYRTLHPDTQQFS 198 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ ID + + D +R SDH P + Sbjct: 199 WWDYRMGGLRRNIGLRIDLTLTSDAL---------TLADAGIDTAPRHWERPSDHAPAWV 249 Query: 301 DY 302 Sbjct: 250 KI 251 >gi|183602482|ref|ZP_02963848.1| possible exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis HN019] gi|183218401|gb|EDT89046.1| possible exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis HN019] Length = 284 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 34/275 (12%), Positives = 72/275 (26%), Gaps = 42/275 (15%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS-----NNDIHTA 113 +AK ++ +QE + + + ++ + + + Sbjct: 21 HWAKAHTPNVWCMQETRAPQEIIADIYGELAADYVHAGKIASPEELHTLVDVCRIKGRAG 80 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 + + + + +D S R + G I V+ +++ + +D Sbjct: 81 VGMISDMPVLETRVGLPGLEEDVDS---GRWIEADVRTEQGYVITVVCVYVHAGGLVDDP 137 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------Y 217 + L + ++ + V+ GDFN N + Sbjct: 138 KEAQK--YRFLDTMTERMQQLQDEAASGGRQAVVCGDFNIAHNPIDLKNPKSNENNNGYF 195 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYK 268 K ID D + + +DY + Sbjct: 196 PRERAYMDKWIDQMDYVDVMRDLAGDIQGPYTWWSQRGRAFDNDSGWRLDYQFATPELAQ 255 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + D S R SDH P++I YD Sbjct: 256 QARG-------FVVDRASSYDSRWSDHAPLTISYD 283 >gi|119899953|ref|YP_935166.1| exodeoxyribonuclease III [Azoarcus sp. BH72] gi|119672366|emb|CAL96280.1| Exodeoxyribonuclease III [Azoarcus sp. BH72] Length = 260 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 81/306 (26%), Gaps = 76/306 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R++S N+N + + +AD+V +QE+ + + Sbjct: 2 LRIISANLNGIRSATTKGF---------------LDWLPAQNADVVCVQELKAQAG--DL 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 Y K S I++ A + G + A R Sbjct: 45 TDAMRAPAGYQGWFHYAEKKGYSGVGIYSRKAP----------DRVVEGLGIADIDAEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + + V+ ++L S + + + L+ Sbjct: 95 Y-----LQADFGALSVISLYLPSGSSSEERQQAKFSFMERFMPRLAELRR-------CGQ 142 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPK-EKDSRCN 246 VI GD+N D + + + ++ + Sbjct: 143 EVVICGDWNIAHREIDLKNWKSNQKNSGFLPEERAWIGTLFDTHGWVDVYRALYPEATGD 202 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + N+ IDY + S + +R SDH P Sbjct: 203 SYTWWSNRGQAWAKNVGWRIDYQIATPGIAARARAGSV-----------YKAQRFSDHAP 251 Query: 298 ISIDYD 303 + +DYD Sbjct: 252 LVVDYD 257 >gi|169769326|ref|XP_001819133.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus oryzae RIB40] gi|83766991|dbj|BAE57131.1| unnamed protein product [Aspergillus oryzae] Length = 305 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 44/300 (14%), Positives = 89/300 (29%), Gaps = 31/300 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD-IVFLQEMGSYNAVA 81 +RL++ NI T+ K R L + + + I+ LQE+ Sbjct: 10 PIRLITHNIRTIPWFT-FPPEKPWNIRRNHIVNQL-DFNTTHNPEAIICLQEVMHRQLTD 67 Query: 82 KVFPKNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG---- 132 + NT S + + + ++ I R + V + L Sbjct: 68 ILTGLNTAPDSESIEGEEIWKHVGCGRDGGQKGEYSPIIYRARVWEVEWATTRWLSETPD 127 Query: 133 -AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + A R +++ G VL ++ D + S L+ + + + Sbjct: 128 TPSRGWDAAYRRIVTYVVLRHRGSGRKVLAMNTHL---DDRGKVARFESAKLILEWMEEV 184 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA--NK 249 + +S+ V+ GDFN N+D + + + R N Sbjct: 185 LK--KKDSDSVEGVVLCGDFN---TNSRENNDAFGVLTAGAMVHTRDCVDGERRYGNVNS 239 Query: 250 NLRN------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +DY ++ + + + G SDH ++ D + Sbjct: 240 WTGFNDTPIDDALLDYVLVGP-LKSGHVPWNIRTYGILTNR-FDDGIFNSDHRAVAADVE 297 >gi|325278018|ref|ZP_08143544.1| endonuclease/exonuclease/phosphatase [Pseudomonas sp. TJI-51] gi|324096847|gb|EGB95167.1| endonuclease/exonuclease/phosphatase [Pseudomonas sp. TJI-51] Length = 261 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 40/299 (13%), Positives = 78/299 (26%), Gaps = 55/299 (18%) Query: 13 LVPCTASVAQKVR---LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 +P + + VR +++ N++ LR+ + AD+V Sbjct: 7 ALPRSTDQSTAVRRLNVLTLNVHKGFTFFNRRF----------ILPELREAVRATGADLV 56 Query: 70 FLQEMG---SYNAVAKVFPKNTWCIFY---STERLINHSKRDSNNDIHTAIAVRKKNVRV 123 FLQE+ +A+ +T + S + + A+ K Sbjct: 57 FLQEVHGSHQQHALRHPAWPDTPQYEFLADSMWPQFAYGRNAVYPQGDHGNALLSKFPI- 115 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 S R + +E+ G V I + + Sbjct: 116 ----QRFNNLDVSVQGKEQRGLLHCQLEVPGHD-QVHAICVHLGLR-----------EAH 159 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 Q Q + P ++AGDFN + + F + + Sbjct: 160 RQSQIQL-LLDLLASLPPQAPVIVAGDFNDW-------RLKADAVLGEHLVEAFGERFGT 211 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + +D + S LSDH P++ + Sbjct: 212 PARSFPARLPLLRLDRIYLRNAMPSAAQVLS-----------NYPWSHLSDHAPLAAEI 259 >gi|229917706|ref|YP_002886352.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b] gi|229469135|gb|ACQ70907.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b] Length = 263 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 35/288 (12%), Positives = 73/288 (25%), Gaps = 46/288 (15%) Query: 30 NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89 NI TL+ + R + + + + D + LQE+ + ++ Sbjct: 2 NILTLNCHAWL------EDRQQEKIDAIVERIASEEYDFIALQEVNQHKEAPLIYGNIRE 55 Query: 90 CIFYS-----------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 F + + +A+ + + +S+ + D + Sbjct: 56 NNFAHVLVERLKELDLHYHMTWDFAHYGYDIYEEGVAILSRTPFLSTESFFVSKTTDPDN 115 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 +R+ V+ ++E V HL + + Q L + Sbjct: 116 YK-SRKIVKAVIEGPETPTTVYSCHLGW----------WHDEEEPVKHQLDELLRRVE-- 162 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI--- 255 ++ GDFN G D+ D + + K Sbjct: 163 --HDDHALLLGDFNNDAFIRGEGYDYLMENGLQDLFHLATEREGDATVQGKIAGWDENKK 220 Query: 256 --PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 ID + + G +SDH + Sbjct: 221 SLRIDLML---------TNAPIHVSRHAVVFDGENGPVVSDHAGVEAT 259 >gi|313206096|ref|YP_004045273.1| exodeoxyribonuclease iii xth [Riemerella anatipestifer DSM 15868] gi|312445412|gb|ADQ81767.1| exodeoxyribonuclease III Xth [Riemerella anatipestifer DSM 15868] gi|315023722|gb|EFT36725.1| Exodeoxyribonuclease III [Riemerella anatipestifer RA-YM] gi|325336460|gb|ADZ12734.1| Exonuclease III [Riemerella anatipestifer RA-GD] Length = 253 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 85/306 (27%), Gaps = 81/306 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+N+N + L + + D++ QE + + Sbjct: 1 MKIISYNVNGIRAAFNKD---------------LIGWLGHAAPDVICFQESKAQKDQIDI 45 Query: 84 --FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 F K + ++ + +S I + G Sbjct: 46 ASFEKEGYHTYWFSAEKKGYSGVGIATKIQP--------------KHVEYGCDMELYDKE 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R ++ ++ + V+ +++ S +D L+ C + L+ I Sbjct: 92 GR-----VIRVDFEDFSVISVYVPSATNIDRLDFKMQ-FCYDFLAYIKELRKTI------ 139 Query: 202 LVPFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRC 245 +I+GDFN + +D + + + F Sbjct: 140 -PNLIISGDFNICHQAIDIHDPVRLKNVSGFLPIEREWMTEFLKECGLIDSFRYFNTEP- 197 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 N + +DY + + L + Y+ SDHC Sbjct: 198 NQYSWWSYRQNARANNKGWRLDYHFVSDSLESRLSRGLILSDAYH-----------SDHC 246 Query: 297 PISIDY 302 P+ ++ Sbjct: 247 PVLVEL 252 >gi|146320230|ref|YP_001199941.1| metal-dependent hydrolase [Streptococcus suis 98HAH33] gi|145691036|gb|ABP91541.1| Metal-dependent hydrolase [Streptococcus suis 98HAH33] Length = 286 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 81/301 (26%), Gaps = 54/301 (17%) Query: 21 AQKVRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---S 76 ++L++ N++ L +R +L Q D++ LQE+ + Sbjct: 21 GGAMKLLTINVHAWL------------EERQDEKLDVLAQTIAEKAYDVIALQEVNQLIT 68 Query: 77 YNAVAKVFPKNTWCIFY---------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 + V K + + + + + IA K Sbjct: 69 ADLVTKDLKADNYGLILLEKLRTLGQFDYSYYWSNSHIGYDKYEEGIAFLTKLPVYEVDQ 128 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 + S +R+ + L V + I + H+ + + + + Sbjct: 129 F-YCSQNKSIDSILSRKIMGLTVFYQDQLIDLYSCHINLPGSEEEDQLDNIRTIVERT-- 185 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-- 245 + ++ GDFN + + DS ++ Sbjct: 186 ------------GNRRFKILMGDFNTDAFSDREAYEAITELGLYDSYNLAMEKDQGITVE 233 Query: 246 ---NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + +DY ++Q F+ +SDH + ++ Sbjct: 234 KAIDGWAGHSQEKRLDYIFLNQKKEVLSSLVIFNGENRPI---------ISDHFGVEVEI 284 Query: 303 D 303 + Sbjct: 285 N 285 >gi|30260540|ref|NP_842917.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Ames] gi|47525644|ref|YP_016993.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|229601471|ref|YP_002864988.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0248] gi|30253908|gb|AAP24403.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Ames] gi|47500792|gb|AAT29468.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|229265879|gb|ACQ47516.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0248] Length = 263 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 76/269 (28%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D+V LQE+ V F + Sbjct: 18 EKIKYLAKVIQEEEYDVVALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ V + ++ + KD+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ L Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEELFKGQVNRLMERVD----SNELSFLMGDFNNNARLQG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +++ + Sbjct: 183 EGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKIRSSKVV 242 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ +SDH + + D Sbjct: 243 FNGTNRKI---------ISDHFGVEVQVD 262 >gi|148230446|ref|NP_001085108.1| endonuclease/exonuclease/phosphatase family domain-containing protein 1 [Xenopus laevis] gi|82184764|sp|Q6IND4|EEPD1_XENLA RecName: Full=Endonuclease/exonuclease/phosphatase family domain-containing protein 1 gi|47939840|gb|AAH72349.1| MGC83496 protein [Xenopus laevis] Length = 556 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 28/296 (9%), Positives = 81/296 (27%), Gaps = 39/296 (13%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+ S + + ++ ++ +QE+ +A+ K+ Sbjct: 254 LRVATWNLQNCSLDKANNPGV---------REVVCMTLLENSIKLLAVQELSDKDALEKL 304 Query: 84 FPKNTWCIFYSTERLINHSKRD------------SNNDIHTAIAVR-KKNVRVLQQSYPL 130 + + + S + + + + + Sbjct: 305 CTELNQPSLPNIRKWKGMRGSWKCIISEKSLCGPSEKEEYFGFLWDVSAGIELKNVNLSE 364 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + + + ++ + +++IHL + + Q Sbjct: 365 NMQTNGNGKHMYLQPYIAHFKVGTCDLTLVNIHL---SPPTVETVKHQNDTYKSAVFGQA 421 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 L++ + + +I G F+ + + + P + + Sbjct: 422 LQETLK----NERDVIILGCFSLPADSSE-----FDVLRKEKFHCLLPLNTFTNISTKNP 472 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302 NK +D + ++ K S I S+HCP+ ++ Sbjct: 473 QGNKS-LDNIWISKSLKKIFTGYSLVVREGLTNPWIPDNWSWGGVASEHCPVLAEF 527 >gi|288817830|ref|YP_003432177.1| exodeoxyribonuclease III [Hydrogenobacter thermophilus TK-6] gi|288787229|dbj|BAI68976.1| exodeoxyribonuclease III [Hydrogenobacter thermophilus TK-6] gi|308751428|gb|ADO44911.1| exodeoxyribonuclease III Xth [Hydrogenobacter thermophilus TK-6] Length = 268 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 80/302 (26%), Gaps = 73/302 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ S+N+N+++ L+ + + DI+ LQE+ + + Sbjct: 10 SFKIASYNVNSINT----------------RKELVLSWLERDPVDILCLQELKTTDE--- 50 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + +A+ + + G D+ Sbjct: 51 -------NFPKEDFMKMGYECYTHGQKTYNGVAICSRFLLEEV----FKGMGDATYDQEK 99 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R ++ K +W+++ + + +IT+ Sbjct: 100 R-----VIGGRFKDVWIINAYFPHGES------RGGRKFFWKLGFYEKFLRFITESFSPN 148 Query: 203 VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 V+ GD N + D K I + + Sbjct: 149 DKIVLVGDMNVAMEDIDVYDPVLLKDTIGTMKEERDALKKLIS--WGFVDAFRYLYPEKR 206 Query: 247 ANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDY ++ + +L ++ + K R + SDH P Sbjct: 207 QFTWWDYIGGMVWKDQGMRIDYILITKPLLAYL-----RDVYVDMWPRKRRNPKPSDHAP 261 Query: 298 IS 299 I Sbjct: 262 IV 263 >gi|301792507|ref|XP_002931219.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like [Ailuropoda melanoleuca] gi|281349729|gb|EFB25313.1| hypothetical protein PANDA_022064 [Ailuropoda melanoleuca] Length = 516 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 41/330 (12%), Positives = 82/330 (24%), Gaps = 69/330 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+VSWNIN + +++ + + LDADIV LQE + Sbjct: 2 LRVVSWNINGIRSPLQGMVYEEPSNCAAM---AMGRILDKLDADIVCLQETKVTRDVLTE 58 Query: 82 KVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPLLGAKDS 136 + + ++S R +S + + G D Sbjct: 59 PLAIIEGYNSYFSFSRNRSGYSGVATFCKDSVTPMAAEEGLSGLLATHNGDVGCYGNMDE 118 Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 F++ R E K + +++++ S + Sbjct: 119 FTQEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADAGKPE----RLSFKMRF 174 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDPN 231 + ++ + +I GD N + Sbjct: 175 YRLLQIRA--EALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDGLLSNL 232 Query: 232 D---------SLIRFPKEKDSRCNANKNLR---------NKIPIDYFVMDQNAYKFLIQE 273 + + + + A +DY + D+ Sbjct: 233 GCQAGSHVRPFIDSYRCFQPKQEGAFTCWSAVSGARHLNYGSRLDYVLGDRTL------- 285 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 I +D + SDHCP+ Sbjct: 286 ---VIDTFQDSFRLPEVMGSDHCPVGAVLS 312 >gi|217969119|ref|YP_002354353.1| exodeoxyribonuclease III Xth [Thauera sp. MZ1T] gi|217506446|gb|ACK53457.1| exodeoxyribonuclease III Xth [Thauera sp. MZ1T] Length = 260 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 84/307 (27%), Gaps = 76/307 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++ N+N + + L + AD + +QE+ + +A + Sbjct: 2 LRIITLNLNGIRS---------------ACTKGLLDWLPAQQADFLCVQELKAQDA--DL 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P+ + ++ + + ++ + A D+ R Sbjct: 45 RPEMRAPAGMQGW------FHAAEKKGYSGVGIYSRHAPDRVVEGLGIPAIDAEGRF--- 95 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++++ K+ V+ ++L S + L S Sbjct: 96 ------LQLDFGKLSVVSLYLPSGSSSAERQQVKFDFMDRFLPHMDQLFQ-------SGQ 142 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 V+ GD+N + D + + + A Sbjct: 143 EVVVCGDWNIAHREADLKNWKSNQKNSGFLPEERAWLGRLFDEQGWIDVYRRLHPEATEA 202 Query: 248 -NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ +DY V + +R SDH P Sbjct: 203 CYTWWSNRGQAWAKNVGWRLDYQVATPGLAASAQAAEV-----------YKAQRFSDHAP 251 Query: 298 ISIDYDF 304 +++DYD+ Sbjct: 252 LTVDYDW 258 >gi|238501800|ref|XP_002382134.1| conserved hypothetical protein [Aspergillus flavus NRRL3357] gi|220692371|gb|EED48718.1| conserved hypothetical protein [Aspergillus flavus NRRL3357] Length = 304 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 44/300 (14%), Positives = 90/300 (30%), Gaps = 32/300 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD-IVFLQEMGSYNAVA 81 +RL++ NI T+ K R L + + + I+ LQE+ Sbjct: 10 PIRLITHNIRTIPWFT-FPPEKPWNIRRNHIVNQL-DFNTTHNPEAIICLQEVMHRQLTD 67 Query: 82 KVFPKNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG---- 132 + NT S + + + ++ I R + V + L Sbjct: 68 ILTGLNTAPDSESIEGEEIWKHVGCGRDGGQKGEYSPIIYRARVWEVEWATTRWLSETPD 127 Query: 133 -AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + A R +++ G VL ++ D + S L+ + + + Sbjct: 128 TPSRGWDAAYRRIVTYVVLRHRGSGRKVLAMNTHL---DDRGKVARFESAKLILEWMEEV 184 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA--NK 249 + + +S+ V+ GDFN N+D + + + R N Sbjct: 185 ---LKKDSDSVEGVVLCGDFN---TNSRENNDAFGVLTAGAMVHTRDCVDGERRYGNVNS 238 Query: 250 NLRN------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +DY ++ + + + G SDH ++ D + Sbjct: 239 WTGFNDTPIDDALLDYVLVGP-LKSGHVPWNIRTYGILTNR-FDDGIFNSDHRAVAADVE 296 >gi|307705505|ref|ZP_07642359.1| exodeoxyribonuclease III [Streptococcus mitis SK597] gi|307620963|gb|EFO00046.1| exodeoxyribonuclease III [Streptococcus mitis SK597] Length = 275 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 78/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K ++P +GA S R Sbjct: 55 KHLEILEELFPGYANTWRSSQEPARKGYAGTMFLYKKELSPTVTFPEIGAP-STMDLEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + K +V ++ + ++ L + Sbjct: 114 I-----ITLEFDKFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAEL--------DKQK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDAPERY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADNVTKSDMIDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 VMEIE 274 >gi|281183305|ref|NP_001162517.1| deoxyribonuclease-1-like 1 [Papio anubis] gi|160213460|gb|ABX10988.1| deoxyribonuclease I-like 1, isoform 1 (predicted) [Papio anubis] Length = 302 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 72/301 (23%), Gaps = 40/301 (13%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 AL+F ++ AQ R+ ++N L+ + L + D Sbjct: 6 ALLFLILVN---GAQAFRICAFNAQRLTL---------AKVAREQVMDTLVRILARC--D 51 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVL 124 I+ LQE+ + A F ++ S + R +VL Sbjct: 52 IMVLQEVVDSSGSAIPLLLRELNRFDASGPYSTLSSPQLGRSTYVETYVYFYRSHKTQVL 111 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSC 181 D R + + ++ +H L Y Sbjct: 112 SSYVY-----DDEDDVFAREPFVAQFSLPSDVLPSLVLVPLHTTPKAVEKELNALYDVFL 166 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + ++ GDFN L + + Sbjct: 167 EVSQHW-------------QSKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADG 213 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + I + + L + + + +SDH P+ ++ Sbjct: 214 EDTTVRASTHCAYDRI--VLHGERCRSLLHTAAAFDFPTTFQLTEEEALNISDHYPVEVE 271 Query: 302 Y 302 Sbjct: 272 L 272 >gi|324515683|gb|ADY46281.1| Recombination repair protein 1 [Ascaris suum] Length = 378 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 32/310 (10%), Positives = 78/310 (25%), Gaps = 76/310 (24%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 S + + +++WN+ L ++ + ADIV LQE Sbjct: 119 SANRPLTIITWNVAGLRALVKKDAC---------------RFITSDKADIVLLQETKCAE 163 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + + H + + K + Q+ ++ Sbjct: 164 V----------PTGFPVKGFKAFVGENPGKTGHAGVILLSKQKPIKVQTKLENVPEELG- 212 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R V K ++++ ++ + + L Sbjct: 213 -VEGRLIVA-----EYDKFYLINAYVPNSGRGLVNLAKRKIWDDFFIDYIKQL------- 259 Query: 199 KESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ + AGD N + + + + Sbjct: 260 -DASKAVIYAGDLNVAHEEIDLANPKTNRNKTAGFTDQERGDFTRLLQAGFVDVYRSLHP 318 Query: 243 SRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + A +DYFV+ + +++ + + S Sbjct: 319 DKTGAYTFWSTMHNARATNIGWRLDYFVVSERLMDKVVKCEINSRV-----------MGS 367 Query: 294 DHCPISIDYD 303 DHCP+++ + Sbjct: 368 DHCPLTLQIN 377 >gi|228913117|ref|ZP_04076756.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228846522|gb|EEM91535.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 263 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 75/269 (27%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 18 EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ V + ++ + KD+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKGQVNRLMERVD----SNELSFLMGDFNNNARLQG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +++ + Sbjct: 183 EGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKIRSSKVV 242 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ +SDH + + D Sbjct: 243 FNGTNRKV---------ISDHFGVEVQVD 262 >gi|269861372|ref|XP_002650396.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Enterocytozoon bieneusi H348] gi|263405653|sp|B7XK66|CCR4_ENTBH RecName: Full=Probable glucose-repressible alcohol dehydrogenase transcriptional effector homolog; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase gi|220066167|gb|EED43664.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Enterocytozoon bieneusi H348] Length = 481 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 37/316 (11%), Positives = 80/316 (25%), Gaps = 39/316 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----SY 77 + ++NI ++ + V +L Q + DI+ LQE+ + Sbjct: 167 ETYSFGTFNILCSLYASNLTYAPSWVINLECRKDILMQTFIAYNLDILCLQEVDINVFNT 226 Query: 78 NAVAKVFPKNTWCIFY---------STERLINHSKRDSNNDIHTAIAVRKKN----VRVL 124 ++ K + + + H + + + Sbjct: 227 FYKEQLAQKLDYDGVILPKKSFDKVTDQPKKFHGIVTFWKKNKFKLIEQVSIDFFQKIIN 286 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + + L + + + E I ++ ++ + + + + L Sbjct: 287 DKRFKYLSDIHTRIFQKTNVGLITIFETCNTNIIIIVANVHLYWNPEFNDIKILQTIIYL 346 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF------- 237 + ++LK+ K V+ GDFN N + + N Sbjct: 347 E-EIEFLKE-----KYKHAHIVLQGDFNSLQNSHVYQYIINRKLPTNIFDPWDYGSLNNG 400 Query: 238 ---------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + N K IDY + I + Sbjct: 401 VTHSLTLRNAYDGHDITFTNFTPSFKAVIDYIFYSKYLNLISIISPIEDEYTKTTIGLPN 460 Query: 289 GKRLSDHCPISIDYDF 304 SDH I + F Sbjct: 461 IHFPSDHILIGAKFQF 476 >gi|126433598|ref|YP_001069289.1| endonuclease/exonuclease/phosphatase [Mycobacterium sp. JLS] gi|126233398|gb|ABN96798.1| Endonuclease/exonuclease/phosphatase [Mycobacterium sp. JLS] Length = 255 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 74/307 (24%), Gaps = 81/307 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78 +R+ ++NI D L Q + LDADIV LQE+ + Sbjct: 1 MRVATFNILHGRSVHDG----------EVDVDRLAQSIRELDADIVALQEVDLHQPRSGT 50 Query: 79 -----AVAKVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 A+ + + + + R+ IA+ + Q Sbjct: 51 TDLTAVAAEAMHAVSHRFVAAIAGTPGATWMAATGREQPGTAAYGIALLSRFPAETWQVV 110 Query: 129 PLLGAKDSFS------------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 L F R A+ + + V + HL + Sbjct: 111 RLPRIPVPFPMYLPGPNRVQIVNEEPRAAMVGTFDTPLGPLTVANTHLSFVPGWN----- 165 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 Q + L + K P ++ GD N Sbjct: 166 --------RVQMRHLVRDLRGFKG---PRMLLGDLNMSPP---------------TPARW 199 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 +D+ + + + + S + +SDH Sbjct: 200 ARMRSLGEGLTFPAHAPDRQLDHVL-TDDPRLRVEKCSAVSLP------------ISDHR 246 Query: 297 PISIDYD 303 + +D Sbjct: 247 ALVVDIS 253 >gi|73985329|ref|XP_541830.2| PREDICTED: similar to 2-phosphodiesterase [Canis familiaris] Length = 616 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 37/320 (11%), Positives = 77/320 (24%), Gaps = 45/320 (14%) Query: 24 VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R VS+N+ S L+++ +AD++ LQE+ Sbjct: 302 IRTVSYNLLADTYAQTEFSRSVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDR 361 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY-------- 128 + P R+ H + T ++ ++ ++ Sbjct: 362 NVFTDSLVPALEAFGLEGVFRIKQHEGLATFYR-KTKFSLLSQHDISFHEALESDPLHKE 420 Query: 129 ---PLLGAKDSFSRAGNRRAVE---LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 L+ + R R +V +L + + + Sbjct: 421 LLEKLVVYPSAQERVLQRSSVLQVSVLQSTKDSSKRLCVANTHLYWHPKGGYIRLIQMAV 480 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDP 230 L ++ +P + GDFN + + D + Sbjct: 481 AL-----AHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVVNGSIPEDHEDWASNGEEE 535 Query: 231 NDSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDD 284 ++ K N +DY +D + S Sbjct: 536 RCNMSLSHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQ 595 Query: 285 IKSRGKRLSDHCPISIDYDF 304 SDH + D + Sbjct: 596 ALPSVSHPSDHIALVCDLKW 615 >gi|193213004|ref|YP_001998957.1| endonuclease/exonuclease/phosphatase [Chlorobaculum parvum NCIB 8327] gi|193086481|gb|ACF11757.1| Endonuclease/exonuclease/phosphatase [Chlorobaculum parvum NCIB 8327] Length = 354 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 38/354 (10%), Positives = 80/354 (22%), Gaps = 79/354 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTS---------DYTLLRQYAKNLD----ADIVF 70 + + WN+ L + ++ + + K + D++ Sbjct: 4 INVAFWNVQNLFDTTASTIATDLDFTPEEGWTEEVFNIKVDNIANIIKQMHGGAGPDLLG 63 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 L E+ + V + K + + + I++A V L Sbjct: 64 LCEVENKEVVNYLLEKIGRNDYRLAHVEAPDIRGIDCSLIYSAKVFND--PPVEDMKGHL 121 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA-- 188 + + V L ++ G ++ V H S + + + Q Sbjct: 122 VNFRFPTRDIFQ---VRLTLKATGAELNVFVNHWPSRRQGQYQSEPHRITVAERCGQLVN 178 Query: 189 --------------QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-------- 226 + ++ GDFN D Sbjct: 179 DVLKLSRQEYAEVHDAAGELEKLNARWNRNVLLMGDFNDDPFCRSITDYLLASKDLDKVE 238 Query: 227 ----------------------TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 + + + + ++ + D F++ + Sbjct: 239 EVVKASSNHEIPAISTYIKRQPALFNLSWPLLAQPDTGTIFFSSDSANTMNLFDQFMVSR 298 Query: 265 NA-----YKFLIQESFSEILYNE----------DDIKSRGKRLSDHCPISIDYD 303 ES E K K SDH PI + D Sbjct: 299 GLCYGESGLKTRPESMRIFTTPEMAPGNKQRPKAFDKKTKKGFSDHFPIEMTID 352 >gi|42527240|ref|NP_972338.1| exodeoxyribonuclease III [Treponema denticola ATCC 35405] gi|41817664|gb|AAS12249.1| exodeoxyribonuclease III [Treponema denticola ATCC 35405] Length = 256 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 80/304 (26%), Gaps = 84/304 (27%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------SYN 78 ++SWN+N + E + + D++ +QE S Sbjct: 3 SIISWNVNGIRAVEKKGF---------------LDWLNTENPDVLCVQETKAAKAQLSKE 47 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 P + ++++ + + + A+ K + ++ L D Sbjct: 48 LTEPDLPNGKYFAYWASAKKAGY----------SGTAIFTKKEPLQVRTMGLKEFDDEGR 97 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 ++ + K+ ++ + + + + C + ++ Sbjct: 98 ----------VLVADFDKVSIISAYFPNSQDGGARLDYKLDFC-------AAILEFCDSV 140 Query: 199 KESLVPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 +E ++ GDFN YL + + F Sbjct: 141 QEEGNNVILCGDFNIAHKPIDLANPKSNEKNPGYLPEERAWMDEFTSSGYTDTFRHFCKE 200 Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + +DY ++ + + + + G SD Sbjct: 201 PAK-YTWWSYRFRAREKNIGWRLDYHCVNDSFLAKIKESIILD-----------GVMGSD 248 Query: 295 HCPI 298 HCP+ Sbjct: 249 HCPV 252 >gi|229194746|ref|ZP_04321537.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293] gi|228588757|gb|EEK46784.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293] Length = 263 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 77/269 (28%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 18 EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ V + ++ + KD+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTAYWK-TRKIVSATIAYNGKNITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKGQVNRLMEHVD----SNELSFLMGDFNNNARLQG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ +D+ ++ + + ID + +++ + Sbjct: 183 EGYEYMMQKGLHDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKVRSSKVI 242 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ N +SDH + + D Sbjct: 243 FNGTNRNI---------ISDHFGVEVQVD 262 >gi|315023036|gb|EFT36049.1| hypothetical protein RAYM_01957 [Riemerella anatipestifer RA-YM] gi|325336276|gb|ADZ12550.1| Endonuclease/exonuclease/phosphatase [Riemerella anatipestifer RA-GD] Length = 397 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 34/296 (11%), Positives = 76/296 (25%), Gaps = 35/296 (11%) Query: 35 SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS 94 ++ S++ + + L +V L E+ + V + + F Sbjct: 106 AKNYNTSIYNQKLINAARVISELGASVTKTAPVVVGLLEVENRQVVEDLVKQPALKKFDY 165 Query: 95 TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG-NRRAVELLVEIN 153 N I A+ +K+ + L + R R + + ++ Sbjct: 166 GVIHYNS---YDYRGIDVALIYQKRRFSPTYSTKKELKIYNEEGRREYTRDLLVVSGYLD 222 Query: 154 GKKIWVLDIHLKSFCFLDSLE-NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 G+K+ H S +++ + + LL Q ++ ++ + GDFN Sbjct: 223 GEKVAFFVNHWPSRRGGEAVSLPKRNAAAQLLRAQMDSVRAL-----DANTKLIAMGDFN 277 Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEK------DSRCNANKNLRNKIPIDYFVMDQNA 266 + + +P + D ++ +N Sbjct: 278 DDPISSSFKNHLKAVGSVKELSPEYPYINLMYPLYKKGVASLAYRDAPNLFDQIIVSENL 337 Query: 267 YKFLIQE-------------------SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 SF + + SDH P+ Sbjct: 338 VNPKDTSYSVFRTEVYAPAYLINKEGSFKGYPFRSWNGDKFTGGYSDHFPVFTILS 393 >gi|195996511|ref|XP_002108124.1| hypothetical protein TRIADDRAFT_20232 [Trichoplax adhaerens] gi|190588900|gb|EDV28922.1| hypothetical protein TRIADDRAFT_20232 [Trichoplax adhaerens] Length = 552 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 42/327 (12%), Positives = 82/327 (25%), Gaps = 53/327 (16%) Query: 19 SVAQKVRLVSWNINTLSEQEG-------VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 + R+VS+N+ + L+ + +ADI+ L Sbjct: 233 TQPDSFRIVSYNVLADTYSSQEHTQKVLFPYCPPYALSIDYRKLLITRELYGYNADIICL 292 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 QE K + F NN A ++ + Sbjct: 293 QECD------KDIFNQFYAPFMKGLGYDGIQDSKINNREGEATFYHMDRFNMIDHHCQSI 346 Query: 132 GA--------------KDSFSRAGNRRAVELLVEINGKK---IWVLDIHLKSFCFLDSLE 174 G R NR ++ +V + K+ I ++ ++ + + Sbjct: 347 GNTLKNDEIFEQICKCPTLKYRLLNRNSIVQIVTLQPKELENIRLVVVNTHFYFRPQASH 406 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 S+L ++ + + + V + GDFN ++ ND + Sbjct: 407 IRILQGYSMLKC----VEKYCEKFIGNDVRVLYCGDFNSHPRTALVKLMTTGSVQSNDPV 462 Query: 235 IRFPK------------------EKDSRCNANKNLRNKIPIDYFVMDQNAYK-FLIQESF 275 N +DY ++ + S Sbjct: 463 WHEGGEEEFCENISLRNDKKCVSFTGYPQFTNFVNGFVECLDYIFGQPEHFQVEQVFPSM 522 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 +E + SDH I D Sbjct: 523 TEEVAAAYTALPSVVSPSDHVAIGCDL 549 >gi|170077908|ref|YP_001734546.1| exodeoxyribonuclease III [Synechococcus sp. PCC 7002] gi|169885577|gb|ACA99290.1| exodeoxyribonuclease III [Synechococcus sp. PCC 7002] Length = 224 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 26/238 (10%), Positives = 72/238 (30%), Gaps = 43/238 (18%) Query: 90 CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR--VLQQSYPLLGAKDSFSRAGNRRAVE 147 + + S + +A+ + V+ P++GA + +R + Sbjct: 5 DFPRQPFEALGYHTSISGQKSYNGVALLSREPLQDVIIGFTPVVGAAIAQDFDAQKRVIS 64 Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207 ++ + V+++++ + + S + Y + LK ++ + + ++ Sbjct: 65 GVI----GDVRVVNLYVPNGSAVGSEKYDYK------LGWFEVLKAYLKELCKDDREILM 114 Query: 208 AGDFNRKINYLGNN--------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 GDFN + + I F ++ + + Sbjct: 115 CGDFNIALEDRDIYMPKKPDHIMASPAERETLTAILDFGFQDVF-RKFNQEADQFSWWDY 173 Query: 254 K---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ + + Y + D ++ SDH P+ ++ Sbjct: 174 RTRGFSRNRGWRIDHIYLTEKLYGQAKRCWI-------DREPRGWEKPSDHTPVIVEL 224 >gi|332672018|ref|YP_004455026.1| exodeoxyribonuclease III Xth [Cellulomonas fimi ATCC 484] gi|332341056|gb|AEE47639.1| exodeoxyribonuclease III Xth [Cellulomonas fimi ATCC 484] Length = 263 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 70/304 (23%), Gaps = 68/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WNIN + + + D++ LQE + Sbjct: 1 MRLATWNIN----------------SIRARTERTVAFLERSGVDVLALQETKCTDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + S +AV + + +G + Sbjct: 41 ------QFPREPFEALGYEVATSGFSQWNGVAVLSRVGLQDVE----VGFPGMPTWGEPA 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KES 201 A + + V +++ + +D Y L+D + Sbjct: 91 AAEARALGATCGGVRVWSLYVPNGREVDDPHYVYKLD------WLARLRDAAEGWLVADP 144 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247 + + GD+N D W +E + Sbjct: 145 QLAAALVGDWNIAPLDTDVWDPAWFAGRTHVTPAERAAFTAIAEAGWTEVSREHLPAEHT 204 Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID + + +GK SDH P+ Sbjct: 205 YTYWDYQRLRFPRNEGMRIDLTYATPALAARVRGAQIV-------RDERKGKAPSDHVPV 257 Query: 299 SIDY 302 +D Sbjct: 258 VLDI 261 >gi|238502459|ref|XP_002382463.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus flavus NRRL3357] gi|220691273|gb|EED47621.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus flavus NRRL3357] Length = 323 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 38/300 (12%), Positives = 89/300 (29%), Gaps = 29/300 (9%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---- 78 +R+++ NI + + K +R L +N DA + LQE+ Sbjct: 8 PLRILTNNIRY-ATKSPFKGEKPWEERRQPLLNQLLYNTRNQDA-FICLQEVLHDQLIDI 65 Query: 79 ---------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 A + ++ W + + S ++ + V P Sbjct: 66 HSGLNREHSAASAEAGEDVWAYIGVGRDDGHEAGEYSPIFYRPSVWQLRHWETVWLSETP 125 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + +K S+ A R + + + +L ++ D + + ++ ++ Sbjct: 126 HVPSK-SWDAASIRIVTIGVFTHHTSRQTILAMNTHL---DDQGSRSRFEAAHIILRKID 181 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-AN 248 + + K+ + + GD N + + D+ + + Sbjct: 182 EYES--GEHKDVISAVFLTGDLNSEETQEAYSVLTGNESTLIDAAKAVDPAEHYGNHLTW 239 Query: 249 KNLRN----KIPIDYFVMDQNAYKFLIQES--FSEILYNE-DDIKSRGKRLSDHCPISID 301 IDY ++ + L + Y+ + G SDH + +D Sbjct: 240 TGFGYEKEDPSRIDYVLLGPRPMEVLNNGGQPWKVEGYSVLANRFDDGVFNSDHRAVVVD 299 >gi|150863920|ref|XP_001382566.2| hypothetical protein PICST_30030 [Scheffersomyces stipitis CBS 6054] gi|149385176|gb|ABN64537.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 320 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 34/280 (12%), Positives = 81/280 (28%), Gaps = 30/280 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++L S NI + + ++ KR + IV LQE+ Sbjct: 63 TIQLYSHNIRCDTWNLKRNE-ESWAKRRARVIDCITH-CSAHLPTIVGLQEVKKNQLDDI 120 Query: 83 VFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + W F + ++ P +K + A Sbjct: 121 IQGLGSGWDYFGVGRDDGIDKGEFAPIFYKSSEWQLVSGTTYWLSETPAKPSK-GWDAAL 179 Query: 142 NRRA--VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + + + +G++I ++ H + + S+ + L Sbjct: 180 PRIVTSIIVKHKQSGREIKCMNTHYDH---------KGKEARNNSSRMIKELA------S 224 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 + + GDFN + +++ + + + + ++ IDY Sbjct: 225 DHSHVCCVLGDFNAEPDHVAYSILASGNLLDTATNCFKRDGFQYTFSGFSKEESESTIDY 284 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + ++ + + + SDH P+S Sbjct: 285 IWVT---------LPARILKFHVMNNEFNDRNFSDHRPLS 315 >gi|313244439|emb|CBY15231.1| unnamed protein product [Oikopleura dioica] Length = 524 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 81/291 (27%), Gaps = 36/291 (12%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVAK 82 + S+NI N+ + + K DI +QE+ +A K Sbjct: 256 KFSSFNIQVFG---------NTKYSKEPVKNQIVEILKRY--DISTIQEIRDSTESAFPK 304 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + S+ + I R ++ + Sbjct: 305 LVDDINAAEDKYDWFTGERQGTTSSKEQIGFIWDRNMFSKIDGYDFNDTATSWFERPPTV 364 Query: 143 RRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 V +K+ ++ HLK + +++ + +++ + + Sbjct: 365 LVLERSSVNAPNFKTQKLAIISAHLKPATGVTNMDTENE------INHLKDVENDLRARH 418 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 ++ +IAGDFN +Y D T+ +D ++ D+ Sbjct: 419 PTVNDVIIAGDFNADCDY--VRDPEDLTLFSESDNSWLISFEDDTTVSSTICAY----DH 472 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--------LSDHCPISIDY 302 V+ + + S Y +SDH P+ ++ Sbjct: 473 IVLSGDIQDNAVAGSGKVFDYQNFYDTDSIFYNGEPITALISDHFPVVFEF 523 >gi|39971297|ref|XP_367039.1| hypothetical protein MGG_10669 [Magnaporthe oryzae 70-15] gi|145012239|gb|EDJ96895.1| hypothetical protein MGG_10669 [Magnaporthe oryzae 70-15] Length = 618 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 43/333 (12%), Positives = 91/333 (27%), Gaps = 61/333 (18%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + V + +N+ L S + L K D+VFLQ Sbjct: 290 ATLASTGSCSGVTVGIFNVENLCP---------SSAHLPAIAAQLVDALKT--PDLVFLQ 338 Query: 73 EMGSYN-------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ + AV+ + + + N +I A Sbjct: 339 EVQDDSCATNDGVVDATNTLEALRFAVSNLTDGKVDYSWVEVAPVDNQDGGQPGGNIRVA 398 Query: 114 IAVRKKNVRVLQ--------------------QSYPLLGAKDSFSRAGNRRAVELLVEIN 153 + + + + + P + + A R+ + + Sbjct: 399 YLYKPSVLTLAEPTNSVGTGADANEVLPGPTLKFNPGRIDPANAAWAATRKPLVAAWKAL 458 Query: 154 G--KKIWVLDIHLKSFCFLDSLENT----YSPSCSLLSQQAQWLKDWITQK--KESLVPF 205 K + +++H S SL + + +QQA ++I + ++ Sbjct: 459 NATKPFFTVNVHFSSKGGSSSLHGDLRTPDNSGVTKRTQQATVTGEFIAKILAEDPEAQV 518 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 + AGDFN I + + L + + N +D+ + + Sbjct: 519 IAAGDFNEFIPVSPLQ--TFMKVSGLLDLDEVVEMAPEERYSYLFDMNTQQLDHTFVSPS 576 Query: 266 AYKFLIQESFSEILY-NEDDIKSRGKRLSDHCP 297 S + + + +SDH P Sbjct: 577 LSVRTPCSRRSHFQHLHVNTWSDTAGEVSDHDP 609 >gi|288924711|ref|ZP_06418648.1| endonuclease/Exonuclease/phosphatase [Prevotella buccae D17] gi|288338498|gb|EFC76847.1| endonuclease/Exonuclease/phosphatase [Prevotella buccae D17] Length = 345 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 37/349 (10%), Positives = 86/349 (24%), Gaps = 65/349 (18%) Query: 6 VLALVFFLVPCTASVAQKVR---LVSWNINTLSEQEGVSLWKN-----------SVKRTT 51 +L L+ + S +K + +N L + + + R T Sbjct: 1 MLIAACLLISMSVSAQKKYSGYAVGFYNQENLFDTCHDAGKNDYDFLPNGSYHWDAMRYT 60 Query: 52 SDYTLLRQYAKNLDAD----------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH 101 + + + ++ D ++ L E+ + A+ + + + H Sbjct: 61 NKLKNMARALADMGTDKEPLRNTGCAVIGLSEVENSRALDDLVAQPQ---LRARGYKYVH 117 Query: 102 SKRDSNNDIHTAIAVRKKNVRVL-QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 + + A+ V + P + S R + + + + + + Sbjct: 118 VEGPDRRGVDCALLYNPALFTVETVKLVPYVQELAKDSAYKTRGFLTVTGRMADEHVAFI 177 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 H S + ++ L +S + GD N Sbjct: 178 VCHWPSRFSGPFYRESAGRQTRVVKDSLLRL--------DSECKIFVMGDMNDDPVNKSM 229 Query: 221 NDDFWKTID------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 + + + + D VM N + Sbjct: 230 TEALGAKAEISEVGEGEMYNPWYNLLAKQGIGTLSYRGSWNLFDQIVMTPNLLNPKGSKD 289 Query: 275 FSEILYNEDDIKSRGK-----------------------RLSDHCPISI 300 FS + + ++ I R SDH P+ + Sbjct: 290 FSTLKFWQNQIVRRDYLLQQEGPYKGSPKRTTAGGVWLNGYSDHLPVVV 338 >gi|237716420|ref|ZP_04546901.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262408021|ref|ZP_06084569.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 2_1_22] gi|229444067|gb|EEO49858.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262354829|gb|EEZ03921.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 2_1_22] Length = 289 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 34/286 (11%), Positives = 69/286 (24%), Gaps = 46/286 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----SYN 78 +R+ ++N+ + T+ + Q ++ D +I +E SY Sbjct: 44 SMRVATYNLQ-----------VETGTGWTNRRERVAQLIRDYDFEICGFEEASWEQRSYL 92 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 T N + S + R P + + Sbjct: 93 GTQLASDYQILAYGRDTGNDDNKAGEMSGILYKKSRYTLLDAGRFWFSETPEIPSNGWDE 152 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R V + + + ++ Q L D ++ K Sbjct: 153 TNFKRFCVWGKFKDSKTQKEFYLFETHMPLADNA-----------RKHACQMLVDAVSDK 201 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + P GDFN + + + + K ID Sbjct: 202 AKDNTPAFCTGDFNATPDAPEIATTICQ---SGILKDAYREAAVQHGALFTFPSKKTRID 258 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP--ISIDY 302 + + + + + LSDH P I ++ Sbjct: 259 FIFV----------KHATVLSTRTIVSS-----LSDHYPMVIVVEI 289 >gi|228919300|ref|ZP_04082670.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840407|gb|EEM85678.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 272 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 35/269 (13%), Positives = 73/269 (27%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 18 EKIQYLAKVIQEEEYDVIALQEVSQSIQAEIVCGNKKEDNFGLLLLEELKELHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ + + ++ + +D+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK-TRKIVSTTLAYNGKDITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKGQVDRLMERVD----SNKLAFLMGDFNNNARLKG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +Q S Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHSLRIDLILCNQ---------S 233 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +SDH + + D Sbjct: 234 KKVHSSKVIFNGTNRNVISDHFGVEVQLD 262 >gi|226322570|ref|ZP_03798088.1| hypothetical protein COPCOM_00342 [Coprococcus comes ATCC 27758] gi|225209064|gb|EEG91418.1| hypothetical protein COPCOM_00342 [Coprococcus comes ATCC 27758] Length = 366 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 40/332 (12%), Positives = 104/332 (31%), Gaps = 69/332 (20%) Query: 18 ASVAQKVR------LVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 + A + +++N+ G S W S + SD + + Sbjct: 52 TAAADTLTTEKEYSALTYNVGFGAYTPDFSFFMDGGKSSWAKSKESVESDIQGAGELVAS 111 Query: 64 LDADIVFLQEMGSYNAVAKVFPK--------NTWCIFYSTERLIN---HSKRDSNNDIHT 112 D D +QE+ + + + ++ ++ + + + Sbjct: 112 KDPDFALIQEVDLNSTRSYHVDEYSILKDTIPSYNTVFAQNYDSAFLFYPFTQPHGRSRS 171 Query: 113 AIAVRKKNVRVLQ--QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 +A+ K +S+P+ + F ++ + NGK++ + +H+ ++ Sbjct: 172 GLALFSKYPVTDSLRRSFPISTSFSKFFDLDRCYSISKVPVDNGKELVIFLLHMSAYGNS 231 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN-------------- 216 D+ + Q + L + ++ E+ + GDFN + Sbjct: 232 DA----------IREAQIRMLSADMEKEYEAGNYVLCGGDFNHDLKASEKNAENCESWAY 281 Query: 217 ------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 + + ++ + +++ + + + +D F+ N Sbjct: 282 PFPREELPEHFSFCLDNLSDSEKDALWDSARNADMEYVPGVTHTVTLDGFITSDN----- 336 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 I Y E + + G SDH P+ + + Sbjct: 337 -------IEYTEYENVNTGYSYSDHDPVYMKF 361 >gi|197116747|ref|YP_002137174.1| endonuclease/exonuclease/phosphatase family protein [Geobacter bemidjiensis Bem] gi|197086107|gb|ACH37378.1| endonuclease/exonuclease/phosphatase family protein [Geobacter bemidjiensis Bem] Length = 343 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 36/293 (12%), Positives = 83/293 (28%), Gaps = 56/293 (19%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +R+++WNI D L + + DIV Q+ A Sbjct: 91 SGTPLRVMTWNIKY----------------GKHDLMPLVEELERSRPDIVLFQDAVRAGA 134 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 W + LI S ++ + +L+ + ++ S Sbjct: 135 GPLAGYFKDWHLLSQGRYLIASRYPLSAAEVFELPYSGRSKEYLLRCKVRVGSSEISLYD 194 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 + + + + + ++ + + +L QA+ + +++ Sbjct: 195 --------VHFKTPRRSLNAFRKAKQGPWYIPDAVERFEDNVTLRLIQARTVAGYLS--- 243 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR------- 252 P ++AGD N ++ +T+ F + + Sbjct: 244 REKGPVLVAGDLN-----SPDSSLVCRTLREAGLADAFAAAGEGYGYTYGHFLLKNRIPL 298 Query: 253 ---NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + ID+ + + +L R SDH P+ D+ Sbjct: 299 LRVSWMRIDHVMTN----SWLTASRCRV----------GTGRASDHRPVIADF 337 >gi|26342330|dbj|BAC34827.1| unnamed protein product [Mus musculus] Length = 436 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 82/314 (26%), Gaps = 33/314 (10%) Query: 24 VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R VS+NI S L+++ +AD++ LQE+ Sbjct: 122 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDR 181 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + P R+ H + + + L + Sbjct: 182 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFRLLSQHDISFQEALKSDPLHKEL 241 Query: 136 SFSRAGNRRAVELLVEINGK-KIWVLDIHLKSF---CFLDSLENTYSPSCSLLSQQAQ-- 189 A N A E +++ + +I VL S C ++ + + Q + Sbjct: 242 LEKLALNPLAQEKVLQRSSVLQISVLQSTTDSSKKICVANTHLYWHPKGGYIRLIQMEVA 301 Query: 190 -WLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPNDSLIR 236 +++ +P + GDFN + + D + S+ Sbjct: 302 LVHIRHVSRDLYPGIPVIFCGDFNSTPSTGMYHFVISGSIAEDHEDWASNGEEERCSMPL 361 Query: 237 FPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGK 290 K N +DY +D + S Sbjct: 362 SHCFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNTLEVEQVIPLPSHEEVTTHQALPSVS 421 Query: 291 RLSDHCPISIDYDF 304 SDH + D + Sbjct: 422 HPSDHIALVCDLKW 435 >gi|224045985|ref|XP_002194287.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 311 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 51/288 (17%), Positives = 94/288 (32%), Gaps = 50/288 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 L++WNI+ L + Y D+VFLQE+ + Sbjct: 63 FSLITWNIDGLDLGN-----------VKDRARGICTYLALYSPDVVFLQEVIPPHLPLLQ 111 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + I + ++ TA+ ++K V++L+ A R Sbjct: 112 MKAGNYTII-----------PGNIDEYFTAVMLKKSRVKLLKHDIIPFPTT-----AMKR 155 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V I+G ++ ++ HL+S +Q Q + + + QK+ Sbjct: 156 NLLVVHVSISGIELCLMTSHLEST----------KNHSKERIKQLQIVFNEM-QKESEST 204 Query: 204 PFVIAGDFNRKINY-------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + GD N + + N D W+ + R+ + S N N + K+ Sbjct: 205 TVIFGGDTNLRDSEVTKLGNLPDNIKDAWEFL-GKPQHCRYTWDTQSNTNLNAAYKCKMR 263 Query: 257 IDYFVMDQNAY-KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D I S I + G+ SDH I ++D Sbjct: 264 FDRIYFRPAVEGGHFIPRSMDLIGL---EKLECGRFPSDHWGILCNFD 308 >gi|114587433|ref|XP_517033.2| PREDICTED: 2',5'-phosphodiesterase 12 [Pan troglodytes] Length = 609 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 36/319 (11%), Positives = 76/319 (23%), Gaps = 43/319 (13%) Query: 24 VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R VS+NI S L+++ +AD++ LQE+ Sbjct: 295 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDR 354 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKN------------VRV 123 + P R+ H + ++ + + Sbjct: 355 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFYEALESDPLHKEL 414 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L++ A++ + + V +L + + + Sbjct: 415 LEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVA 474 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPN 231 L ++ +P + GDFN + + D + Sbjct: 475 L-----AHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEER 529 Query: 232 DSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDI 285 ++ K N +DY +D + S Sbjct: 530 CNMSLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNTLEVEQVIPLPSHEEVTTHQA 589 Query: 286 KSRGKRLSDHCPISIDYDF 304 SDH + D + Sbjct: 590 LPSVSHPSDHIALVCDLKW 608 >gi|330996514|ref|ZP_08320396.1| endonuclease/exonuclease/phosphatase family protein [Paraprevotella xylaniphila YIT 11841] gi|329573070|gb|EGG54689.1| endonuclease/exonuclease/phosphatase family protein [Paraprevotella xylaniphila YIT 11841] Length = 362 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 32/293 (10%), Positives = 76/293 (25%), Gaps = 53/293 (18%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++L+++N L+ E + + + Y +ADI+ LQE + + Sbjct: 98 DALKLLTYNTEFLARGEKDAEGRYP----------ILDYLVASEADIICLQEGVAPKNLK 147 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 S + R ++ V + + + Sbjct: 148 S-------EYVDSIMAKAGYHIRRLHDGKAEPQFVYSRLPVLSVHRIAYESTTNGSLAVE 200 Query: 142 NRRAVELLVEING---------------KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 + ++ +N K+I + L + + L Sbjct: 201 LLYGQDTVLLVNNHLESYKLTPEDKMKYKEIIKDPESGHAESNSRELVRKMAGASRLRGP 260 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 Q + +++ K ++ GD N + + F + + Sbjct: 261 QVDSVLNYVE--KSGRKAVIVCGDLNDSPISYSCHRLSSRLKSA------FRQSGNGLGL 312 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ + + + D + SDH P+ Sbjct: 313 SYNQKGFYFRIDHIFVSD----------YWQTYETHVDKTAPW---SDHYPMI 352 >gi|319940717|ref|ZP_08015059.1| exodeoxyribonuclease III [Sutterella wadsworthensis 3_1_45B] gi|319805868|gb|EFW02635.1| exodeoxyribonuclease III [Sutterella wadsworthensis 3_1_45B] Length = 263 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 36/307 (11%), Positives = 76/307 (24%), Gaps = 80/307 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VA 81 R++++N N + + + + + D++ +QE+ + + Sbjct: 2 FRIITFNANGIRSASRKGFFT---------------WLRTMSPDVLCMQELKAQESDLTE 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + ++ + +S + R K V G +S A Sbjct: 47 DLRTPLGFRGYFHCAQKKGYSG--------CGLWSRVKPFAVR------TGFGNSEFDAE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R VE + + V+ ++ S D ++ L+ S Sbjct: 93 GRY-----VEADFGSVIVISVYFPSGSSSDDRQSAKFRFLDAFKVHMDELRQ-------S 140 Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 +I GD N + + F Sbjct: 141 GREVIICGDINIAHKEIDLKNWKGNLDHSGFLPEERAWLDQRFGKEGWVDVFRMLDPRPE 200 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + IDY + ++ SDH Sbjct: 201 R-YTWWSQRGQARAKNVGWRIDYQITTPGIAALARNTGI-----------FPDEKFSDHA 248 Query: 297 PISIDYD 303 P+ +DYD Sbjct: 249 PLWVDYD 255 >gi|288574340|ref|ZP_06392697.1| hypothetical protein Dpep_1612 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570081|gb|EFC91638.1| hypothetical protein Dpep_1612 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 284 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 85/305 (27%), Gaps = 37/305 (12%) Query: 1 MIR--KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 M R + + ++ A + + + ++N+ S + S+ +LL Sbjct: 1 MKRHGTIAVTIGIMVLLILAEPSWSLTIATFNMEYFSISG-------PRGYSRSERSLLA 53 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Q + A+IV LQE+ + ++ Y +R Sbjct: 54 QKIEASGAEIVALQEIEGDETMRTFVSEDLPGWSYGGNDTQGKQDLYFIWKSDK---IRS 110 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + + K S + R +E E + I++ Sbjct: 111 IKPLRPRMVEERINWKGSIHKLFQRPPLEGTFEEISTETTFSAINVHLRGLSTRGNGNRL 170 Query: 179 PSCSLLS--QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + + + +QAQ L + ++ P I GDFN Sbjct: 171 DAVAANNGIRQAQILSLGVLS-EKHDDPLFILGDFNT------------------TEPTL 211 Query: 237 FPKEKDSRCNANKNLRNKIPIDYF-VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 P K ID+ ++ E+ + + G++ DH Sbjct: 212 APFPTLKLEEGYSYDDLKCTIDHIGYVN---ISPESNWGLRELETSIPERSRAGRQHPDH 268 Query: 296 CPISI 300 + + Sbjct: 269 DMVIL 273 >gi|227540901|ref|ZP_03970950.1| possible exodeoxyribonuclease III [Corynebacterium glucuronolyticum ATCC 51866] gi|227183161|gb|EEI64133.1| possible exodeoxyribonuclease III [Corynebacterium glucuronolyticum ATCC 51866] Length = 233 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 35/294 (11%), Positives = 81/294 (27%), Gaps = 75/294 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + + + D D++ LQE Sbjct: 1 MRIATWNVN----------------SARARFGRITELLARHDIDVLALQETKIKEF---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + Q+ G D + R Sbjct: 41 ------------PPVKGYEVAHVGYNQWNGVAILSRVGLKDVQT-SFTGQPDYEGKKEGR 87 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + GK + ++++ + +D Y ++L ++ S Sbjct: 88 AISAV---CGGK--RIWNLYVPNGRAVDHPHYDYK---------LRFLYNFARYAAPSAD 133 Query: 204 PFVIAGDFNRKI-------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + GDFN + ++ + ++ A + Sbjct: 134 --LAMGDFNVIPGAEDVYDESPFETHVTEPERAAFEYLTDVLPVVSPTGYTYWDYQARRF 191 Query: 251 -LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ID+ + A + D R + SDH P+ +Y+ Sbjct: 192 DRDQGMRIDFHLSTTPATSGFV------------DRAERAAKSSDHAPVICEYE 233 >gi|15639119|ref|NP_218565.1| exodeoxyribonuclease (exoA) [Treponema pallidum subsp. pallidum str. Nichols] gi|189025359|ref|YP_001933131.1| exodeoxyribonuclease [Treponema pallidum subsp. pallidum SS14] gi|3322391|gb|AAC65116.1| exodeoxyribonuclease (exoA) [Treponema pallidum subsp. pallidum str. Nichols] gi|189017934|gb|ACD70552.1| exodeoxyribonuclease [Treponema pallidum subsp. pallidum SS14] gi|291059544|gb|ADD72279.1| exodeoxyribonuclease III [Treponema pallidum subsp. pallidum str. Chicago] gi|313505256|gb|ADR64396.1| exodeoxyribonuclease III [Treponema pallidum subsp. pallidum] gi|313505276|gb|ADR64415.1| exodeoxyribonuclease III [Treponema pallidum subsp. pallidum str. Mexico A] Length = 264 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 31/302 (10%), Positives = 73/302 (24%), Gaps = 69/302 (22%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAKV 83 R++SWN+N + E + D++ LQE+ + ++ Sbjct: 6 RIISWNVNGIRAIERKDF---------------LSWLAREAPDVLCLQEIKAHESQLSAA 50 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 W + ++ A+ K + + + R Sbjct: 51 LRAPVWSAGAGGTYY--TYFHSAQRPGYSGTALFSKRAPDAVRFFGVPAFDCEGRMLAAR 108 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ V+ + + C + + +++ + Sbjct: 109 F----------GELTVVSAYFPNAQEGGKRLAYKLDFC-------AAFRAFCDEERTAGQ 151 Query: 204 PFVIAGDFNRKINYLG--------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GD+N + + W + + Sbjct: 152 HVILCGDYNIAHKEIDLAHPQENEGNPGFLPQERAWMDTFTEAGYADSFRAFCTEGQQYT 211 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY +DQ + + SDHCP+ + Sbjct: 212 WWSYRARARARNIGWRIDYQCVDQAFLARVTSSQILSEVT-----------GSDHCPVCL 260 Query: 301 DY 302 Y Sbjct: 261 TY 262 >gi|322805921|emb|CBZ03486.1| exodeoxyribonuclease III [Clostridium botulinum H04402 065] Length = 263 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 37/297 (12%), Positives = 92/297 (30%), Gaps = 52/297 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++++ N + ++ L + + D++ LQE+ + Sbjct: 1 MKILTLNCH-----------SWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKIL 49 Query: 84 FPKNTWCIFY------------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 F F + +++ + +A+ K++ ++S+ + Sbjct: 50 FDNIKEDNFAFILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHLIKEKKSFYIS 109 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 +KD R+ ++ ++ N I+ HL + D E+ QA L Sbjct: 110 KSKDKNFWK-TRKVIKCKIDYNNNPIYFYSCHL--GWWDDEEED--------FKFQANKL 158 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----N 246 + + Q ++ GD+N D+ D + + + Sbjct: 159 IEDLKQ----DETCILMGDYNNDAFLNNKGYDYLINKKLKDIYHLARSKDNGVTAIGDID 214 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K + +D + ++N + F+ I +SDH + + Sbjct: 215 GWKGNTKNMRLDLILSNKNLKVEYCKVIFNGIRKEI---------ISDHFGVEAKIE 262 >gi|255947092|ref|XP_002564313.1| Pc22g02690 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591330|emb|CAP97557.1| Pc22g02690 [Penicillium chrysogenum Wisconsin 54-1255] Length = 681 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 42/361 (11%), Positives = 95/361 (26%), Gaps = 72/361 (19%) Query: 15 PCTASVAQKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + S +K+ ++S+N S Q + V L+ ++ +ADIV LQ Sbjct: 303 TSSNSNTEKITVLSYNTLCDSSATQSHYGYVPSRVLSWEFRRELILNELRSHNADIVCLQ 362 Query: 73 EMG----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 E+ + ++ + +++ R + + D+ A + +L + Sbjct: 363 EVDQGSYNNFFREQLAYNDYKGVYWPRGRAMGMQEEDARMVDGCATFFKGSKYILLDKQL 422 Query: 129 PLLGAK-----------DSFSRAGNR-RAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 G D ++R + ++ N + + + ++ Sbjct: 423 INFGQTAVRRPDAKGQDDIYNRLWQKDHIAVVVFLENRQTGARFISVNAHLYWDPAFKDV 482 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLV--------------------------------- 203 ++L ++ L D + Sbjct: 483 KLIQTAILMEEITKLSDNYAKWPACTDKTAFRFSEAESGSETTPVVEPAPSMEYTSGDQI 542 Query: 204 PFVIAGDFNRKINY-----------LGNNDDFWKTIDPNDSLIRFPKEK---------DS 243 P ++ GDFN ++ D K + N S + Sbjct: 543 PVLMCGDFNSSPGSAAYNLISTGRLPEDHPDLEKRLYGNLSKVGMTHPFKLKSAYSSMGE 602 Query: 244 RCNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +DY N + + + SDH + ++ Sbjct: 603 LSFTNYTSDFTAILDYVWYSSNTLHVSALLGEVDKEYLRRVPGFPNFHFPSDHVALLAEF 662 Query: 303 D 303 Sbjct: 663 T 663 >gi|260817292|ref|XP_002603521.1| hypothetical protein BRAFLDRAFT_79056 [Branchiostoma floridae] gi|229288840|gb|EEN59532.1| hypothetical protein BRAFLDRAFT_79056 [Branchiostoma floridae] Length = 282 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 35/287 (12%), Positives = 86/287 (29%), Gaps = 31/287 (10%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--A 79 +++ ++NI S +L + + DI+ +QE+ A Sbjct: 20 DGLKIGAFNIQIFGT---------SKMAQPEIADMLVRICQRY--DILLIQEVRDSTGTA 68 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS- 138 + + + + +I+ + + A R + SY ++ Sbjct: 69 IVDLLNRVNSAGHANYGMVISDRLGRTTSKEQYAFFYRTDVGLTVTSSYHYDDGNEALGT 128 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R + + + + ++E Q +++ I + Sbjct: 129 DTFEREPFIVRFSSSRTAVHDFVLVAIHTSPDHAVEE---------IQALDTVRESIVSR 179 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTI-DPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 +I GDFN NY+ + ++ + + N Sbjct: 180 WRITD-IMIMGDFNADCNYVRPSHWDSISLWTRYRTYDWLIGHDADTTVTSTNCAY---- 234 Query: 258 DYFVMD-QNAYKFLIQESFSEILYNEDDIKS-RGKRLSDHCPISIDY 302 D V+ ++ S S ++ + + + + +SDH P+ +D Sbjct: 235 DRIVVSGPTLKGSVLPHSASVYDFSRNLHCNCQAEAVSDHYPVEVDL 281 >gi|297197975|ref|ZP_06915372.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|197715024|gb|EDY59058.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length = 279 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 31/285 (10%), Positives = 73/285 (25%), Gaps = 61/285 (21%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------YN 78 R+++WN+ + R ++ LQE + Sbjct: 48 RVMTWNLCN-------PCKTGNDDR--------AAEIATFAPQVIGLQEACVGDVEKIRD 92 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + + + + N A+ + Sbjct: 93 YLENLHGLVYHVEYGAVLQSWGRCGGAPWNPGGYGEAILSAAPMTDVVTEEYPDGG---- 148 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + +R +E+ + G+ + V + HL ++ + Q L + + Sbjct: 149 -SEDRGYMEVTTTVGGRPVRVFNTHL-----------AERRQEAVRADQVGVLAKEVARH 196 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + ++ GDFN + W+ D R + C + + D Sbjct: 197 DRA----IVIGDFNAVPDAYELTK-MWRLATDADPHCRP--GAATTCEPTTDWQ--SKFD 247 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 Y + + ++SDH + D + Sbjct: 248 YVFLRG-----YVPARHRVHP----------NQVSDHHVLYADVN 277 >gi|146421647|ref|XP_001486768.1| hypothetical protein PGUG_00145 [Meyerozyma guilliermondii ATCC 6260] Length = 497 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 86/311 (27%), Gaps = 47/311 (15%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 R+ S N+ ++ +KR + ++ L+ +V LQE+ + Sbjct: 196 TFRIYSHNVRNGGRDILDPGEESWLKRYRKITASI-KFNSQLN-TVVALQEVYKFQLDDI 253 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD------- 135 + N + E R + + + + K Y + + Sbjct: 254 MRDLNRYSPPEEPEWEAYGVGRIDGDQLGEFVPILFKTSEWEMVFYDSIWLNEDNPRMAL 313 Query: 136 -SFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + R + ++ ++G I V + HL E + ++ + + Sbjct: 314 EGWDAKYLRIVSYVTLKHVSGNYINVFNTHL-----DHMGELSKQGLAQIILDKMNSINQ 368 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-----PKEKDSRCNAN 248 W P + GD N + N + + F K + Sbjct: 369 W---------PSFLCGDLNTEPNEKAYQIITEQFRNLAKLTTAFNKYGHSKSTVTGFEGE 419 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR----------------GKRL 292 L IDY + L + + L + G + Sbjct: 420 VLLNGGQNIDYIFA-PSYTAKLGETVLCDKLTTSPPSERYLDLRLKSFGMLHSKFNGLYM 478 Query: 293 SDHCPISIDYD 303 SDH PI D+ Sbjct: 479 SDHRPIVADFT 489 >gi|118361195|ref|XP_001013828.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila] gi|89295595|gb|EAR93583.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila SB210] Length = 277 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 45/294 (15%), Positives = 93/294 (31%), Gaps = 64/294 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 QK++ +S+N+ + V L++ N D D + +QE+ + Sbjct: 34 QKLKFISYNV-WFDQHNFV-----------ERSIELKKIFLNYDPDFICMQEVTQPFLIQ 81 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K +Y + +N + + K +Q + F Sbjct: 82 LAQDKEICQKYYFSSPFVN----------QYDVFILSKYPISFKQMF--------FPSQM 123 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + IN +KI + HL+S D+ +Q + +K+ ++ ES Sbjct: 124 GRNLLFGEININNRKIVIGTTHLESLKNNDNY----------RMEQLKIIKELLSSYDES 173 Query: 202 LVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + GDFN + N D WK + PN+ + + Sbjct: 174 ----IFMGDFNMSKLNEEQSIPENYIDIWKALHPNE---------EGHTMQASKKFPSVR 220 Query: 257 IDYFVM------DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D ++ + + + ++ ++ SDH + + F Sbjct: 221 FDRVLLRQSTYWSPSHIEIIGKDPIPYYQNHQKKQIYEIVTPSDHYGLYAEISF 274 >gi|229823722|ref|ZP_04449791.1| hypothetical protein GCWU000282_01024 [Catonella morbi ATCC 51271] gi|229786761|gb|EEP22875.1| hypothetical protein GCWU000282_01024 [Catonella morbi ATCC 51271] Length = 275 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 31/305 (10%), Positives = 79/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + + ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLSK------AVLDQLAQAGADIIAIQETKLSPTGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ S ++ + + + ++P +GA Sbjct: 55 KHEEILAEYFPGYAHTWRSSQEPARKGYAGTLFLYREHLQPKVTFPEIGAPS-------- 106 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +++ G+ I + + D++ ++ Sbjct: 107 -----TMDLEGRIITLEFDDCYVTQVYTPNAGDGLKRLAERQVWDAKYADYLVS-LDAKK 160 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GDFN + + F + Sbjct: 161 PVLATGDFNVAHQEIDLANPGANRQSAGFTDEERAGFTHLLSRGFTDSFRHLHGDVPHQY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY+++ + + + + DH PI Sbjct: 221 TWWAQRSRTSKINNTGWRIDYWLVSDRIADKVTKSEMLDSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 LLEIN 274 >gi|94993733|ref|YP_601831.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS10750] gi|94547241|gb|ABF37287.1| Exodeoxyribonuclease III [Streptococcus pyogenes MGAS10750] Length = 303 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 38/327 (11%), Positives = 91/327 (27%), Gaps = 57/327 (17%) Query: 3 RKYVLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 + +++ + + + +++L+SWNI++L+ + + R + Sbjct: 7 KSLIVSFFVTITTRLSVRKRYQMKLISWNIDSLNAALTGESPRALLSR------AVLDTL 60 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 DADI+ +QE T ++ + S + + KN Sbjct: 61 VAQDADIIAIQETKLSAKGPTKKHIETLLSYFPNYLHVWRSSVEPARKGYAGTMFLYKNT 120 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 ++P +GA + G ++ + + +V ++ + + Sbjct: 121 LNPVITFPEIGAPTTMDAEGR------IITLEFEDFFVTQVYTPNAGDGLRRLDDRQIWD 174 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWK 226 + L ++ P + GD+N R + + Sbjct: 175 HKYADYLTEL--------DTQKPVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERQGFT 226 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFS 276 + F + + IDY++ + + Sbjct: 227 NLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGWRIDYWLASNRIVDKIKRSEMI 286 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303 + DH PI +D D Sbjct: 287 SSGERQ-----------DHTPILLDID 302 >gi|40063316|gb|AAR38134.1| exodeoxyribonuclease III [uncultured marine bacterium 578] Length = 254 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 89/304 (29%), Gaps = 75/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++ N+N + E + + K +AD+V LQE+ A Sbjct: 1 MRIITINVNGIRAAERKGFF---------------SWLKKQNADVVCLQEI---KAQEDQ 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + T K S ++ + + + + R Sbjct: 43 LDERFYPPSMYTYYHSAERKGYSGTGLYCK-----------SKPDRVAYSPWEDINSEGR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++ V+ I+L S + + + + + ++ Sbjct: 92 I-----IQADFGELSVISIYLPSGSSKEERQAFKMEFITDRF------LPHLRKLQKDGR 140 Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++I GD+N +L + T+ I +E + Sbjct: 141 KYIICGDWNIAHKKIDLKNWRSNQKNSGFLPEERAWLDTLYDEVGYIDSFREINYDEFQY 200 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ +DY V+ N + +R SDH P+ Sbjct: 201 TWWSNRGQAWLNNTGWRLDYQVVSSNLAGLASSCEI-----------YKKERFSDHSPLI 249 Query: 300 IDYD 303 IDY+ Sbjct: 250 IDYN 253 >gi|313206282|ref|YP_004045459.1| endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM 15868] gi|312445598|gb|ADQ81953.1| Endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM 15868] Length = 395 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 34/296 (11%), Positives = 76/296 (25%), Gaps = 35/296 (11%) Query: 35 SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS 94 ++ S++ + + L +V L E+ + V + + F Sbjct: 104 AKNYNTSIYNQKLINAARVISELGASVTKTAPVVVGLLEVENRQVVEDLVKQPALKKFDY 163 Query: 95 TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG-NRRAVELLVEIN 153 N I A+ +K+ + L + R R + + ++ Sbjct: 164 GVIHYNS---YDYRGIDVALIYQKRRFSPTYSTKKELKIYNEEGRREYTRDLLVVSGYLD 220 Query: 154 GKKIWVLDIHLKSFCFLDSLE-NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 G+K+ H S +++ + + LL Q ++ ++ + GDFN Sbjct: 221 GEKVAFFVNHWPSRRGGEAVSLPKRNAAAQLLRAQMDSVRAL-----DANTKLIAMGDFN 275 Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEK------DSRCNANKNLRNKIPIDYFVMDQNA 266 + + +P + D ++ +N Sbjct: 276 DDPISSSFKNHLKAVGSVKELSPEYPYINLMYPLYKKGVASLAYRDAPNLFDQIIVSENL 335 Query: 267 YKFLIQE-------------------SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 SF + + SDH P+ Sbjct: 336 VNPKDTSYSVFRTEVYAPAYLINKEGSFKGYPFRSWNGDKFTGGYSDHFPVFTILS 391 >gi|281312468|sp|Q28FQ5|TYDP2_XENTR RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase; AltName: Full=TRAF and TNF receptor-associated protein homolog Length = 373 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 81/285 (28%), Gaps = 46/285 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++WNI+ L E + Y D+VFLQE+ Sbjct: 125 FSFLTWNIDGLDESN-----------VAERARGVCSYLALYSPDVVFLQEV--------- 164 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + ++ TA+ ++K V+++ Q + R Sbjct: 165 --IPPYYEYLKKRAVSYTIITGNEDEYFTAMMLKKSRVKLISQEIVPYPST-----VMMR 217 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + V I+G I ++ HL+S +Q + + L Sbjct: 218 NLLVANVNISGNSICLMTSHLEST----------KDHSKERLKQLDIVLKKMMD-APPLA 266 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI------PI 257 + GD N + + I + P+ + N + Sbjct: 267 TVIFGGDTNLRDQEVAKIGGMPNNILDVWDFLGKPEHCRYTWDTKVNKNLRAPYICRLRF 326 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D + + Q + + G+ SDH + D+ Sbjct: 327 DRIFFRAS--QEGSQVIPQSLYLAGTEKLDCGRFPSDHWGLLCDF 369 >gi|228983625|ref|ZP_04143829.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228776110|gb|EEM24472.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 263 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 76/269 (28%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 18 EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEGLKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ V + ++ + KD+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKGQVNRLMEHVD----SNEISFLMGDFNNNARLQG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +++ + Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKVRSSKVI 242 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ N +SDH + + D Sbjct: 243 FNGTNRNI---------ISDHFGVEVQVD 262 >gi|62858529|ref|NP_001016944.1| tyrosyl-DNA phosphodiesterase 2 [Xenopus (Silurana) tropicalis] gi|89268280|emb|CAJ81630.1| novel protein similar to ttrap [Xenopus (Silurana) tropicalis] gi|183986439|gb|AAI66146.1| TRAF and TNF receptor associated protein [Xenopus (Silurana) tropicalis] Length = 384 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 81/285 (28%), Gaps = 46/285 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++WNI+ L E + Y D+VFLQE+ Sbjct: 136 FSFLTWNIDGLDESN-----------VAERARGVCSYLALYSPDVVFLQEV--------- 175 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + ++ TA+ ++K V+++ Q + R Sbjct: 176 --IPPYYEYLKKRAVSYTIITGNEDEYFTAMMLKKSRVKLISQEIVPYPST-----VMMR 228 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + V I+G I ++ HL+S +Q + + L Sbjct: 229 NLLVANVNISGNSICLMTSHLEST----------KDHSKERLKQLDIVLKKMMD-APPLA 277 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI------PI 257 + GD N + + I + P+ + N + Sbjct: 278 TVIFGGDTNLRDQEVAKIGGMPNNILDVWDFLGKPEHCRYTWDTKVNKNLRAPYICRLRF 337 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D + + Q + + G+ SDH + D+ Sbjct: 338 DRIFFRAS--QEGSQVIPQSLYLAGTEKLDCGRFPSDHWGLLCDF 380 >gi|229089490|ref|ZP_04220760.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-42] gi|228693876|gb|EEL47569.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-42] Length = 263 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 75/269 (27%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 18 EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ V + ++ + KD+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKDQVNRLMERVD----SNELSFLMGDFNNNARLQG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +++ + Sbjct: 183 EGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKIRSSKVV 242 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ +SDH + + D Sbjct: 243 FNGTNRKV---------ISDHFGVEVQVD 262 >gi|293365069|ref|ZP_06611786.1| endonuclease/exonuclease/phosphatase family protein RgfB [Streptococcus oralis ATCC 35037] gi|307702222|ref|ZP_07639182.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus oralis ATCC 35037] gi|291316519|gb|EFE56955.1| endonuclease/exonuclease/phosphatase family protein RgfB [Streptococcus oralis ATCC 35037] gi|307624235|gb|EFO03212.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus oralis ATCC 35037] Length = 271 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 40/281 (14%), Positives = 75/281 (26%), Gaps = 54/281 (19%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95 + +L Q D D++ QE+ +V N + S Sbjct: 17 EEKFQILLQDILEKDYDLICFQEINQEMTSPEVEVNNHYQALPSAEPIHQDHYVQLLVEK 76 Query: 96 -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148 + H +A+ K ++ L+ D + RR + Sbjct: 77 LAEKGKNYYWTWAYNHIGYDRYHEGVAILSKTPIKARE--ILVSDVDDPTDYHTRRVALV 134 Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208 E+ GK++ + +HL + E + + L P ++A Sbjct: 135 ETEVEGKELALASVHLSWWDKGFQEEWARFEAV------LKELNK----------PLILA 178 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263 GDFN GN + D+ + S + K IDY Sbjct: 179 GDFNNPAGQEGNQAILASPLGLQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + ++SDH ++ + Sbjct: 239 KEL---------EVESLQVVFDGQNSPQVSDHYGLNAVLTW 270 >gi|315636243|ref|ZP_07891495.1| exodeoxyribonuclease III [Arcobacter butzleri JV22] gi|315479452|gb|EFU70133.1| exodeoxyribonuclease III [Arcobacter butzleri JV22] Length = 262 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 35/308 (11%), Positives = 77/308 (25%), Gaps = 71/308 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A++ + +SWN+N + + ++ ++ D++ +QE S Sbjct: 2 AKRYKFISWNVNGIRAVDKKDA---------------LKWIDEIEVDLLGVQETKS---- 42 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K+ ++ S + A+ Q + D Sbjct: 43 ----MKDQIPKTIFSKEFKTLFASASAIKGRSGTALFSDIEPTFQSICESVDILDEGR-- 96 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 E+ + K I +++ + + + L K+ Sbjct: 97 ----INEIHFNLADKNIAFFNVYFPNGQSSQERLDYKMEFYDRFLNHCENL-------KK 145 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWK-------TIDPNDSLIRFPKEKDSRCNA------ 247 ++ GD N + ++ + Sbjct: 146 DGKSIIVCGDVNTAHTEIDIARPKANENTSGFLQMERDWITKFLSHGYIDTFRLINGDIK 205 Query: 248 --NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + IDYF + + Y +D SDHC Sbjct: 206 DKYSWWSYRANARANNVGWRIDYFYVSSDLKD-----------YVKDAYILDNIEGSDHC 254 Query: 297 PISIDYDF 304 PI ++ +F Sbjct: 255 PIGLEMEF 262 >gi|297290189|ref|XP_001105245.2| PREDICTED: 5'-tyrosyl-DNA phosphodiesterase-like [Macaca mulatta] Length = 388 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 82/285 (28%), Gaps = 48/285 (16%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 ++WNI+ L + + Y D++FLQE+ Sbjct: 142 FITWNIDGLDLNN-----------LSERARGVCSYLALYSPDVIFLQEV----------- 179 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + TAI ++K V++ Q + R Sbjct: 180 IPPYYSYLKKRASDYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPST-----KMMRNL 234 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + + V ++G ++ ++ HL+S + Q + + + + Sbjct: 235 LCVHVNVSGNELCLMTSHLEST----------RGHAAERMNQLKMVLKKMQE-APESATV 283 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKIPIDY 259 + AGD N + + I + + + N K+ D Sbjct: 284 IFAGDTNLRDQEVTKCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRFDR 343 Query: 260 FVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 A + +I S + + G+ SDH + + D Sbjct: 344 IFFRAAAEEGHIIPRSLDLLGL---EKLDCGRFPSDHWGLLCNLD 385 >gi|151553571|gb|AAI48925.1| Deoxyribonuclease I-like 1 [Bos taurus] Length = 316 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 34/289 (11%), Positives = 72/289 (24%), Gaps = 33/289 (11%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 AS A+ R+ ++N L+ + L + DI+ LQE+ Sbjct: 23 ASGAETFRICAFNAQRLTL---------AKVAREPVLDTLVKILARC--DIMVLQEVVDS 71 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-AIAVRKKNVRVLQQSYPLLGAKDS 136 + A F + +HS + ++ + + +D Sbjct: 72 SDTAIPLLLRELNRFGDSGPYASHSSLLLGRSTYKEKYVYLYRSHEAEVRDSYMYDDQD- 130 Query: 137 FSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 R + K + ++ +H L Y + Sbjct: 131 --DLFTREPFVCWFSLRSKVLPSLVLVPLHTTPKAVETELNALYDVFLDASGRW------ 182 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 ++ GDFN L + + Sbjct: 183 -------QTKDVILLGDFNADCTSLTKKRLDDLVLRTQAGFHWAIADGVDTTVRASTHCT 235 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 I + ++ L + + + + +SDH P+ +D Sbjct: 236 YDRI--VLHGEHLQSLLRGAAAFDFPQSFGLTEQEALNISDHYPVEVDL 282 >gi|119503212|ref|ZP_01625296.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2080] gi|119460858|gb|EAW41949.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2080] Length = 259 Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 85/306 (27%), Gaps = 78/306 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81 +R+++ N N + + + + DAD V +QE + Sbjct: 1 MRVITCNTNGIRAAQRKGFF---------------SWLSQQDADFVCIQETKAQIHQLDP 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +F + Y+ + + + AV + + DS R Sbjct: 46 ALFAPEGYHCTYNDAQKPGY----------SGTAVFSRIKPKTVVTKLGWEPMDSQGRY- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 ++ + K V+ +++ S ++ ++ Q LK Sbjct: 95 --------LQADFKGFSVISLYVPSGSSGEAAQDRKEIFMEKFLPHLQALKR-------K 139 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 F+I GD+N + + + + + + + + Sbjct: 140 RREFIICGDWNICHREIDLKNWRGNRKNSGFLPHERAWLDRVYDELGWVDVFRRINPNPD 199 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ +DY + S R +R SDH P Sbjct: 200 QYTWWSNRGQAWAKNVGWRLDYMLCTPGIASAGSSASI-----------YRDERFSDHAP 248 Query: 298 ISIDYD 303 + ID+D Sbjct: 249 LIIDFD 254 >gi|325924898|ref|ZP_08186330.1| exodeoxyribonuclease III [Xanthomonas perforans 91-118] gi|325544685|gb|EGD16036.1| exodeoxyribonuclease III [Xanthomonas perforans 91-118] Length = 266 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 89/313 (28%), Gaps = 83/313 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R++S+N N L + + DAD++ +QE + ++ Sbjct: 1 MRIISFNANGLRSAASKGFF---------------AWFAAQDADVLCVQETKAQE--HQL 43 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + S ++ +A+ ++ ++ D R Sbjct: 44 AGPD-----FLPTGYKAWFRDASTKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRY--- 95 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + V+ ++ S + ++ Q QWL+ + Q S Sbjct: 96 ------IEARFGNLSVVSFYIPSGSSGELRQDYK-------FQVMQWLRPILEQWLASGR 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN------DSLIRFPKEKDSRCNA---------- 247 +V+ GD+N L + + D L + N Sbjct: 143 QYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPERDWLNGLCADAPEDTNPAEGRGWVDSY 202 Query: 248 ---------NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 N+ IDY ++ L S R Sbjct: 203 RVLHPQGQDYTWWSNRGAARANNVGWRIDYQLVTPGLRDTLKACSI-----------YRE 251 Query: 290 KRLSDHCPISIDY 302 +R SDH P +DY Sbjct: 252 ERFSDHAPYIVDY 264 >gi|260431780|ref|ZP_05785751.1| endonuclease/exonuclease/phosphatase [Silicibacter lacuscaerulensis ITI-1157] gi|260415608|gb|EEX08867.1| endonuclease/exonuclease/phosphatase [Silicibacter lacuscaerulensis ITI-1157] Length = 347 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 98/335 (29%), Gaps = 56/335 (16%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-- 75 A+ AQ++R+ ++N +++G L ++R + DIV LQ + Sbjct: 13 AAQAQELRIATFNTEL--QRDGPGLLLRDIQRDHHQVRAVVDVLVATKPDIVALQGIDWD 70 Query: 76 -SYNAVAKVFP-----KNTWCIFYSTERLINH-----------------SKRDSNNDIHT 112 A++++ + +S++ S+ Sbjct: 71 HEQRALSELAGKLSAAGLNYLHLFSSQPNSGMMTPSDLDGDERLGGAGDSQGWGRFTGQG 130 Query: 113 AIAVRKKNVRVLQQ-------SYPLLGAKDSFSRAGNRRAV---------------ELLV 150 +AV K V + + L R G+ + + Sbjct: 131 GLAVLSKFPIVSDEFRDYSQLRWRDLPGASLPKRDGSPFPSDQAQSIQRLSSTGHWIVPI 190 Query: 151 EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGD 210 + ++ ++ H F + + + + L + FVIAGD Sbjct: 191 DTPLGRLNLMTFHATPPVFDGPEDRNGLRNRDEIRFWSVLLNGGL--GPAPTDRFVIAGD 248 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI--PIDYFVMDQNAYK 268 N + D + + + L + + ++ +DY + Sbjct: 249 ANLDPFRGEGHTDAIRDLLAHPLLQDPAPRDSNGSDTTVQWKSVGERRVDYVLPS---TD 305 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + I+ + L D+ + S H + +D Sbjct: 306 WKIEHAGIYWLDANGDVVPAAQTASRHRLVWVDLS 340 >gi|167585100|ref|ZP_02377488.1| exodeoxyribonuclease III Xth [Burkholderia ubonensis Bu] Length = 257 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 85/307 (27%), Gaps = 79/307 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+++ N+N + + ++ +AD V +QE + + + A Sbjct: 2 MRVITANLNGIRSAAKKGFF---------------EWLGEQNADCVCVQEIKVSADDLPA 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + ++ +S + + +G S + Sbjct: 47 EFVEPHGLRSYFHHAEKKGYSGAGLYSRREPDDVI--------------IGFGSSEFDSE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R VE K+ V+ +++ S D + L + Sbjct: 93 GRY-----VEARYGKLSVVSVYVPSGSSGDERQQAKYRFMDEFMPHLAEL--------KK 139 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD N + + + + + + + D R Sbjct: 140 KREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTQLFDDVGYVDVFRALDPRPE 199 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + + S + + SDH P Sbjct: 200 QYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKRTSI-----------FKDIKFSDHAP 248 Query: 298 ISIDYDF 304 +++DYD+ Sbjct: 249 LTVDYDY 255 >gi|49479897|ref|YP_034699.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|196045232|ref|ZP_03112464.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus 03BB108] gi|218901573|ref|YP_002449407.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus AH820] gi|225862411|ref|YP_002747789.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus 03BB102] gi|228925624|ref|ZP_04088713.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228931871|ref|ZP_04094767.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229120029|ref|ZP_04249284.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201] gi|229182756|ref|ZP_04309996.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1] gi|49331453|gb|AAT62099.1| possible endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|196023816|gb|EDX62491.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus 03BB108] gi|218537236|gb|ACK89634.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus AH820] gi|225785970|gb|ACO26187.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus 03BB102] gi|228600729|gb|EEK58309.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1] gi|228663495|gb|EEL19080.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201] gi|228827851|gb|EEM73589.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228834102|gb|EEM79650.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 263 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 75/269 (27%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 18 EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ V + ++ + KD+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNVVKEDAFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKDQVNRLMERVD----SNELSFLMGDFNNNARLQG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +++ + Sbjct: 183 EGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKIRSSKVV 242 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ +SDH + + D Sbjct: 243 FNGTNRKV---------ISDHFGVEVQVD 262 >gi|297161245|gb|ADI10957.1| hypothetical protein SBI_07837 [Streptomyces bingchenggensis BCW-1] Length = 271 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 75/297 (25%), Gaps = 49/297 (16%) Query: 9 LVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 +V +P +A+ VR++S+NI D L + + Sbjct: 1 MVLADLPASATAQDAAVVRVLSYNIR----------------SMRDDREALVRVVRACAP 44 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-NVRVLQ 125 D++ +QE W S + T + V + Sbjct: 45 DVLCVQEAP---------RFFRWRKAASWLARETGLVHTTGGATATGPMLLTSLRAHVER 95 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 LL R R ++ G + L + S + + Sbjct: 96 TEDILLPHVPGLHR---RGLATAVLRFGGGH------RGDNGIRLGVVSCHLSLAEAERY 146 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 QA + D + + + V+AGD N D + + Sbjct: 147 DQAGMVLDQLARL--DVPYTVLAGDINDPPEGRAFRRLAGPLRDAWATEPWGSELT---- 200 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + ID + E D+ + SDH P+ Sbjct: 201 --YPPGQPRERIDALFATEGVEILGCGVPAGLPGVTEADL----RAASDHLPVLAAL 251 >gi|196034583|ref|ZP_03101991.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus W] gi|228944177|ref|ZP_04106556.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|195992626|gb|EDX56586.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus W] gi|228815566|gb|EEM61808.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 263 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 75/269 (27%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 18 EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ V + ++ + KD+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKDQVNRLMERVD----SNELSFLMGDFNNNARLQG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +++ + Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKIRSSKVV 242 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ +SDH + + D Sbjct: 243 FNGTNRKV---------ISDHFGVEVQVD 262 >gi|163740390|ref|ZP_02147784.1| hypothetical protein RG210_09822 [Phaeobacter gallaeciensis 2.10] gi|161386248|gb|EDQ10623.1| hypothetical protein RG210_09822 [Phaeobacter gallaeciensis 2.10] Length = 354 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 41/339 (12%), Positives = 85/339 (25%), Gaps = 56/339 (16%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ-- 72 P A A+ +R+ S+N LS + L ++ + + Q DADI+ LQ Sbjct: 18 PAEADPAKTLRIASFNTE-LSRKGPGLLLRDLQRGKDPQVGAILQTLTEADADILVLQGI 76 Query: 73 ----EMGSYNAVAKVFPKNTWCIFYSTERLINHSK-------------------RDSNND 109 E S + + K + N Sbjct: 77 DWDHEGRSVTELRNLLSKRIPRYGHIYAARPNTGMQTGHDMDGDGRLGTARDAQGYGRFT 136 Query: 110 IHTAIAVRKKNVRVLQQSYPL------------LGAKDSFSRAGNRRAVELL-------- 149 +A+ + + + L L + +R A+ Sbjct: 137 GQDGMAILSRLPILRAEVRDLSELLWQDLPGATLPTYPHGTPFPSRDALAAQRLSTTGHW 196 Query: 150 ----VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + +G+++ V+ F + + + L + P+ Sbjct: 197 IVPILLPSGEQLSVMAFQATPPLFDGPEDRNGLRNQDEIRLWQVLLDGGL--GPTPTEPW 254 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK--IPIDYFVMD 263 VI G N + + + L + N + +DY + Sbjct: 255 VIVGGANLDPDKGAGRRTAIADLLRDPRLQDPRPPDAAGRTDTVNWGTSGSMRVDYVLPS 314 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ++ + S H + D Sbjct: 315 RALQ--VVASGLIWPAEITAKEGGADRPASRHALVWTDL 351 >gi|133712474|gb|ABO37085.1| ExoA [Treponema paraluiscuniculi] Length = 264 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 31/302 (10%), Positives = 73/302 (24%), Gaps = 69/302 (22%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAKV 83 R++SWN+N + E + D++ LQE+ + ++ Sbjct: 6 RIISWNVNGIRAIERXDF---------------LSWLAREAPDVLCLQEIKAHESQLSAA 50 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 W + ++ A+ K + + + R Sbjct: 51 LRAPVWSAGAGGTYY--TYFHSAQRPGYSGTALFSKRAPDAVRFFGVPAFDCEGRMLAAR 108 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ V+ + + C + + +++ + Sbjct: 109 F----------GELTVVSAYFPNAQEGGKRLAYKLDFC-------AAFRAFCDEERTAGQ 151 Query: 204 PFVIAGDFNRKINYLG--------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 ++ GD+N + + W + + Sbjct: 152 HVILCGDYNIAHKEIDLAHPQENEGNPGFLPQERAWMDTFTEAGYADSFRAFCTEGQQYT 211 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDY +DQ + + SDHCP+ + Sbjct: 212 WWSYRARARARNIGWRIDYQCVDQAFLARVTSSQILSEVT-----------GSDHCPVCL 260 Query: 301 DY 302 Y Sbjct: 261 TY 262 >gi|149238650|ref|XP_001525201.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146450694|gb|EDK44950.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 547 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 104/334 (31%), Gaps = 52/334 (15%) Query: 2 IRKYVLALVFFLVPCTASVAQKV-RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ- 59 ++ ++++ + S +++ +L+++N L + K+ R + L Sbjct: 83 VKLIRVSMLTLDISTDCSSRKQLIKLLTFNTWGL-----KFVSKHRKHRLQAIADELANP 137 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 D DIV LQE+ + + + K AI ++ Sbjct: 138 KTVEDDYDIVALQEIWCEEDWDYLD-----RVCRNRYPYRRVFKSGIITGPGLAILSKQP 192 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI------NGKKIWVLDIHLKSFCFLDSL 173 V +P+ G +F R + V I I +L+ H+ + Sbjct: 193 IVETFLYRFPINGRSSAFFRGDWYVGKSISVTIFQPHKEGSLPIALLNSHMHAPYGHGDA 252 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--------DDFW 225 + +C QA + K++ + GD N K L D W Sbjct: 253 SYSTHRAC-----QAWDFAKLVRMLKKAGYAVIQVGDLNSKPESLPYKIFTVEGGLTDSW 307 Query: 226 KTIDPNDSLIRFPKEKDSR------------CNANKNLRNKI-----PIDYFVMDQNAYK 268 + +D + K S N +N+ +DY ++D N Sbjct: 308 NVLHKDDLMNAAELAKLSPEDQIALGGVTCNSRLNTWRKNRRLSEACRLDYALIDANNIV 367 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + + S SDH S+++ Sbjct: 368 PVTAGVKFTGILPKPWLCSY----SDHFAYSVEF 397 >gi|317025526|ref|XP_001389249.2| glucose-repressible alcohol dehydrogenase transcriptional effector [Aspergillus niger CBS 513.88] Length = 749 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 39/363 (10%), Positives = 99/363 (27%), Gaps = 77/363 (21%) Query: 15 PCTASVAQKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + S +K+ ++S N S + V L+ ++ D+DI+ LQ Sbjct: 372 SSSNSPTEKITVLSHNALCDSSATPSHFGYTPSRVLSWEFRRELILSELRSHDSDIICLQ 431 Query: 73 EMG----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 E+ + ++ + +++ R + + ++ + A + +L + Sbjct: 432 EIDQGSYNGFFREQLAYNDYKGVYWPRGRAMGMQEEEAKSVDGCATFFKGSKFILLDKQM 491 Query: 129 PLLGAK-----------DSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSL 173 G D ++R + + +++ + G + V++ HL + + Sbjct: 492 INFGQTAVRRPDAKGQDDIYNRLWQKDHIAVVIFLENRLTGSRFIVVNAHL---YWDPAF 548 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLV------------------------------ 203 ++ ++L ++ L + + Sbjct: 549 KDVKLIQTAILMEEITKLSEKYAKFPPCTDKTAFRFSEAEGESDTPPPEPAPSVEYASGD 608 Query: 204 --PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSR-- 244 P + GDFN N + + F + Sbjct: 609 QIPLFMCGDFNSAPGSAAYNLVAHGRLTESHPDLEKRLYGNLSRVGMTHPFKLKSAYNSI 668 Query: 245 ---CNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 N K +DY + + + + SDH + Sbjct: 669 GELSFTNYTPDFKDILDYIWYTSNTLHVSALLGEVDKEYLQKVPGFPNFHFPSDHVALFA 728 Query: 301 DYD 303 ++ Sbjct: 729 EFT 731 >gi|301755468|ref|XP_002913572.1| PREDICTED: deoxyribonuclease gamma-like [Ailuropoda melanoleuca] Length = 304 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 91/285 (31%), Gaps = 32/285 (11%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-----A 79 RL S+N+ + E + K + ++ + K DI+ L E+ N Sbjct: 22 RLCSFNVRSFGE---------AKKENKNAMDVITKVIKRC--DIILLMEIKDSNNMICPT 70 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + N+ + + R++ + + A ++K V V ++SY + + Sbjct: 71 LMERLNGNSRRGIMYNYVISSRLGRNTYKEQY-AFLYKEKLVSV-KKSYLYHDYQAGDAD 128 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 +R + + + I S++ + + +W Sbjct: 129 VFSREPFVVWFQSPYTVVKDFVIVPLHTTPETSMKEIDELADVYWDVKRRW--------- 179 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 F+ GDFN +Y+ + + + +++ I Sbjct: 180 -KTENFIFMGDFNAGCSYVPKKAWKNIRLRTDPEFVWLIGDQEDTTVKRSTSCAYDRI-- 236 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 + Q ++ +S S + + + + L SDH P+ Sbjct: 237 VLRGQEIISSIVPKSNSTFNFQKAYELTEEEALDVSDHFPVEFKL 281 >gi|91206583|sp|Q2QDE6|DNSL1_CRIGR RecName: Full=Deoxyribonuclease-1-like 1; AltName: Full=DNase X; AltName: Full=Deoxyribonuclease I-like 1; Short=DNase I-like 1; Flags: Precursor gi|73921498|gb|AAZ94279.1| DNase X [Cricetulus griseus] Length = 304 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 38/298 (12%), Positives = 73/298 (24%), Gaps = 33/298 (11%) Query: 10 VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 V L+ A + R+ ++N L+ S L Q DI+ Sbjct: 11 VALLLIFLAGGTEAFRICAFNAQRLTL---------SKLAKEPVMDTLVQILARC--DIM 59 Query: 70 FLQEMGSYNAVA---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 LQE+ + + N + + L + S R ++L Sbjct: 60 VLQEVVDSSQKTVSLLLRELNRFDSSRTYSFLNSSLLGRSTYKEKYVYIYRSDKTQILNS 119 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSLLS 185 + + R + K + V+ + L + E L Sbjct: 120 -----YQYNDTNDLFAREPFVAQFALPSKILPSVVLVPLHTTPKDVEKELNALYDVFLDV 174 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 Q ++ GDFN L + + + Sbjct: 175 SQRWQ-----------NEDVILLGDFNADCASLTKKRLNSLLLRTEAGFHWVISDGEDTT 223 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 I + Q L + + + +SDH P+ ++ Sbjct: 224 VRASTNCTYDRI--VMHGQGCQTLLRAAAPFNFPRSFQLTEEEALSISDHYPVEVELS 279 >gi|109896865|ref|YP_660120.1| endonuclease/exonuclease/phosphatase [Pseudoalteromonas atlantica T6c] gi|109699146|gb|ABG39066.1| Endonuclease/exonuclease/phosphatase [Pseudoalteromonas atlantica T6c] Length = 391 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 42/372 (11%), Positives = 96/372 (25%), Gaps = 92/372 (24%) Query: 21 AQKVRLVSWNI-----NTLS---EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 A+ VR+ ++N+ N L G L++N + + + + DI+ L Sbjct: 20 AKTVRIATFNVSMEASNYLPKGVTPTGQELFENLQSGDNQQIKNIAEIIQRVRPDIILLN 79 Query: 73 EMGSYNAVAKVFPKN---------------TWCIFY------------------STERLI 99 E + K + +Y ++ Sbjct: 80 EFDYTSDDDKGVKAFISHYLAVSQLGTKSIDYPYYYIAPVNTGVPSGVDLNHNGTSTDNG 139 Query: 100 NHSKRDSNNDIHTAIAVRKKNVR-------------------------VLQQSYPLLGAK 134 + + + + + + Sbjct: 140 GDTFAFGLYPGQYGMVLLSRFPIEREQLRTFQHFLWKDMPNGLLNSVKTEEGADWYSPQA 199 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL--- 191 + R ++ ++ + I+GK + VL H F + + ++ Sbjct: 200 KAIFRLSSKSHWDVPISIDGKLVHVLASHPTPPVFDGPENRNGKRNHDEIRFWTDYISGG 259 Query: 192 --KDWITQKKE-----SLVPFVIAGDFNRKINYLGNNDDFWKTIDPN------------D 232 D+I K+ FV+ GD N + D ++ N Sbjct: 260 KGADYIYDDKQQRGGLRSEHFVVLGDLNASAEEGDGHKDGIGSLLKNSKVNSHNIPMSAG 319 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + P+ + ++ DY + + + F + ++ Sbjct: 320 GAVHSPENALGASHTAFW---RMRADYVLPSKKLGEVSTSGVFWPTSDEASYRLIQNRQA 376 Query: 293 -SDHCPISIDYD 303 SDH + +D D Sbjct: 377 SSDHRLVWVDVD 388 >gi|333025455|ref|ZP_08453519.1| hypothetical protein STTU_2959 [Streptomyces sp. Tu6071] gi|332745307|gb|EGJ75748.1| hypothetical protein STTU_2959 [Streptomyces sp. Tu6071] Length = 334 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 37/350 (10%), Positives = 76/350 (21%), Gaps = 77/350 (22%) Query: 1 MIRKYVLALVFFLVPCTASVA---------QKVRLVSWNINTLSEQEGVSLWKNSVKRTT 51 M + ALV + + A +R++++N+ + G T Sbjct: 1 MAISALTALVLTAGAVSPASAAGFTNNPNPDTLRVLTYNVCMNTRCAGTYGLAG----TE 56 Query: 52 SDYTLLRQYAKNLD-----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 ++++ N D D++ LQE + + Sbjct: 57 DRLRQIQEWVVNRDGQSRRPDVLVLQEA-------------NYKEVSTGTAGDGEKLEAI 103 Query: 107 NNDIHTA-------IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + A I + V +G D+ S+ G Sbjct: 104 FEEYKIASKQDERWILYNTSTLSVTDSGTVGVGEPDAASKVFP----WAQFARKGTNNRA 159 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 + + + + L + V+AGDFN + Sbjct: 160 TVVDVHLANGDAERQGR----------ELDRLAAGLGAALPLGTRTVVAGDFNARRTDAT 209 Query: 220 NNDDFWKTIDPNDSLIRF----------PKEKDSRCNANKNLRNKI-----PIDYFVMDQ 264 L + + + PID+ Sbjct: 210 AAHVNDAFASRTGPLTDAVPAGRRTSTLHAKTFTTAYSPVWYGEPEGAGNLPIDHVYFGS 269 Query: 265 NA----------YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + R SDH + + + Sbjct: 270 GLHCVPGAGQVYKDRGEPRVVTSQAEEDARWAEVHARRSDHNAVYTELSW 319 >gi|289741011|gb|ADD19253.1| glucose-repressible alcohol dehydrogenase transcriptional effector CCR4 [Glossina morsitans morsitans] Length = 627 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 35/325 (10%), Positives = 84/325 (25%), Gaps = 46/325 (14%) Query: 25 RLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS- 76 R+VS+NI S + L+ + +ADI+ LQE+ Sbjct: 296 RIVSYNILADLYADTDYSRTHLFPYCPAYALKADYRKQLIIKEILGYNADIICLQEVDVK 355 Query: 77 --YNAVAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + + ++ I + ++ + +N + + L Sbjct: 356 FFNFDLQHILEDDQQAFKGLLAQKGICGEGVATFYNVKRFDLLETRNFNIGENIRVLTIF 415 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWV----LDIHLKSFCFLDSLENTYSPSCSLLSQQA- 188 +D + + + + + + + ++ + + + Q Sbjct: 416 RDLWQKIQTNEKLAERICDRSTTLQLTLLKMKECEHYLLVANTHLYFHPDADHIRLLQFG 475 Query: 189 ----------QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + L + +E+ + V +GDFN G + +D + Sbjct: 476 LSMLYIEDMYRKLIKQLNLNEENQLAVVFSGDFNSVP-ECGIFRLMTEGFVEDDFIDWRS 534 Query: 239 KEKDS------------------RCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEIL 279 +++ N +DY + + Sbjct: 535 NTEEALAGVSLKQPFRMQSACGTPQYTNFTHAFAACLDYIFYQSDRLDVEQVVPLPALEE 594 Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304 SDH + D F Sbjct: 595 LKSHIAIPSVVFPSDHVALVADLRF 619 >gi|225555928|gb|EEH04218.1| endonuclease/exonuclease/phosphatase [Ajellomyces capsulatus G186AR] Length = 307 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 76/303 (25%), Gaps = 31/303 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+++ NI + K R L ++ + + LQE+ Sbjct: 8 PIRILTHNIRY-ATSAPFRGEKPWKDRKQRLLNELHYHSCHNPETFICLQEVLHVQLNDI 66 Query: 83 VFPKNT-------------------WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 + N W + S A+ +++ V Sbjct: 67 LSGLNPSTSTSTSTSTSTSTGATTEWAYIGVGRDDGKQAGEYSPIFYRPAVWELEESKTV 126 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 P + + + R + + + VL + D + + L Sbjct: 127 WLSETPSVP-SRGWDASSIRIVTIGVFKHLVSRKRVLGMSTHL---DDQGSKSRYEAAKL 182 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW---KTIDPNDSLIRFPKE 240 + A ++ +AGDFN + N + +D + + Sbjct: 183 ILTMANLYLTKNRLASRNINGIFLAGDFNSEENQEAYRVLTAVDSQFVDAQKQVDTALRY 242 Query: 241 KDSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 IDY ++ + E + G SDH + Sbjct: 243 GSENTYTGFGYEDEGPKRIDYVLIGPKHG--VNPAWSVEGYAVVPNKFDDGVLNSDHRAV 300 Query: 299 SID 301 D Sbjct: 301 VAD 303 >gi|12862077|dbj|BAB32346.1| unnamed protein product [Mus musculus] Length = 385 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 46/330 (13%), Positives = 77/330 (23%), Gaps = 70/330 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-- 81 +R+VSWNIN + + T LR+ LDADIV LQE V Sbjct: 2 LRVVSWNINGIRSPLQGLACQEPSSC----PTALRRVLDELDADIVCLQETKVTRDVLTE 57 Query: 82 --KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDS 136 + +S R D T +A L G D Sbjct: 58 PLAIVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYGNMDE 117 Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 F++ R +E K + +++++ + Sbjct: 118 FTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPX------KPERLTFKM 171 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDPN 231 + + L+ + +I GD N + Sbjct: 172 RFYRLLQMRAEPLLAAGSHVIILGDLNTAHRPIDHCDASSLECFEXDPGRKWMDGLLSNP 231 Query: 232 DSLIRFPKEKDSRCNANKNL------------------RNKIPIDYFVMDQNAYKFLIQE 273 + +DY + D+ Sbjct: 232 GDEAGPHIGLFMDSYRYLHPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRAL------- 284 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 I + SDHCP+ + Sbjct: 285 ---VIDTFQASFLLPEVMGSDHCPVGAVLN 311 >gi|57101132|ref|XP_533780.1| PREDICTED: similar to Deoxyribonuclease gamma precursor (DNase gamma) (Deoxyribonuclease I-like 3) (DNase I homolog protein DHP2) (Liver and spleen DNase) (LS-DNase) (LSD) [Canis familiaris] Length = 304 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 36/285 (12%), Positives = 89/285 (31%), Gaps = 32/285 (11%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-----A 79 RL S+N+ + + + + ++ + K DI+ L E+ N Sbjct: 22 RLCSFNVRSFG---------GAKRENKNAMDVIVKVIKRC--DIILLMEVKDSNNMICPT 70 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + N+ + + R++ + + A ++K V V ++ Y + + Sbjct: 71 LLEKLNGNSRRGIKYNYVISSRLGRNTYKEQY-AFLYKEKLVSV-KKYYLYHDYQAGDAD 128 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 +R + + + I S + + D + K Sbjct: 129 VFSREPFVVWFQSPFTAVKDFVIVPLHTTP--------EASVKEIDELVDVYLDVKRRWK 180 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 F+ GDFN +Y+ + + + +++ + I Sbjct: 181 AEN--FIFMGDFNAGCSYVPKKAWKIIRLRTDPGFVWLIGDQEDTTVKSSTHCAYDRI-- 236 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 + + ++ S S + + + + + L SDH P+ Sbjct: 237 VLRGPEIIRSVVPRSNSTFDFQKAFLLTEEEALNVSDHFPVEFKL 281 >gi|157828223|ref|YP_001494465.1| exodeoxyribonuclease III [Rickettsia rickettsii str. 'Sheila Smith'] gi|157800704|gb|ABV75957.1| exodeoxyribonuclease III [Rickettsia rickettsii str. 'Sheila Smith'] Length = 271 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 77/304 (25%), Gaps = 72/304 (23%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 +V+WNIN+L LLR+ A DI+ LQE +++ Sbjct: 3 IVTWNINSL----------------RLRIDLLRKLAYEHQPDIILLQETKVADSL----- 41 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + S + +A+ K S L + R Sbjct: 42 ----FPLEVIKNIGYEHVIYSGQKSYNGVAIISKFPLNNVFSLELYNSDK-------RHI 90 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++ +I +V D + + + + +++W+T + Sbjct: 91 AAMVNDIEIHNFYV-------PAGGDIPDIEVNTKFKHKLEYIRLMQEWLTTNRTKNDKM 143 Query: 206 VIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 +I GD N + + + + Sbjct: 144 IIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSLLVELQNALGFIDSSRHFVSLDEKFYT 203 Query: 250 NLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +D+ + N L + SDH P Sbjct: 204 WWSYRNIDWKKSNRGRRLDHIWVSDNLKGAL-------FSMHLLSEARDWFSPSDHVPYF 256 Query: 300 IDYD 303 + ++ Sbjct: 257 VTFN 260 >gi|116251927|ref|YP_767765.1| hypothetical protein RL2169 [Rhizobium leguminosarum bv. viciae 3841] gi|115256575|emb|CAK07661.1| hypothetical exported protein [Rhizobium leguminosarum bv. viciae 3841] Length = 417 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 98/344 (28%), Gaps = 73/344 (21%) Query: 27 VSWNINTLSEQE-----GVSLWKNSVKRTTSDYTLLRQYA-KNLDADIVFLQEMGSYNAV 80 +SWNI+ L + G + L + + D++ QE+ AV Sbjct: 79 ISWNISVLPPCDVFKTPGFDTVPVTEAAYVKRSGQLTTFIENKIAPDVIAFQEVSGEQAV 138 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 V P + + + AV + L S L + Sbjct: 139 RDVLPNDGADYLVCSFGSHKVQRLAFAWKKEFGPAVECEVEDALSLSSSL------AEKD 192 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLD--------SLENTYSPSCSLLSQQAQWLK 192 R + L + I+GK LD+HLKS C C L QQ L+ Sbjct: 193 RVRPGLALALTIDGKLTRFLDVHLKSGCVSPFDNPPDALDGNAGDDDPCITLQQQVVPLE 252 Query: 193 DWITQKKESLVPFVIAGDFNR------------KINYLGNNDDF---------------- 224 WI +K V+ GDFNR + + + Sbjct: 253 KWIERKSADTNRVVVLGDFNRNVWHETHEPGKTRTDGSDPKSELPSTVKVRKLIDEVNDG 312 Query: 225 ------WKTIDPNDSLIRFPKEKDSRCNANK--------------NLRNKIPIDYFVM-- 262 +D + E R + K RN + +D+ ++ Sbjct: 313 APEGSKLTLLDEACPINTASDEACKRLKSAKMSDDEKLLKRSENLGCRNPVGLDHIMIGA 372 Query: 263 ---DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + L + + LSDHCP++ Sbjct: 373 GFSSPHPAEKVALGRQGRTLSASAEHPNPLLSLSDHCPLTAVVS 416 >gi|325954373|ref|YP_004238033.1| endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922] gi|323436991|gb|ADX67455.1| Endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922] Length = 320 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 41/298 (13%), Positives = 78/298 (26%), Gaps = 63/298 (21%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 ++L F+ + + ++ S NI SD L Q+ Sbjct: 83 FMLIRPFYFGENAKTESPNYKVASVNIY----------------SQNSDVYTLMQFINKE 126 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 AD+V LQE+ + + + ++ R N IA+ + Sbjct: 127 KADLVLLQEVTTKWQNNLDNLRTLYPYYHEEVRDNN-----------FGIALYSRYPIDS 175 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + + + + + KKI VL H + Sbjct: 176 LVVKNYIDDRHPS--------LWATISVGEKKIQVLGTHPVPPLPNQARFEK-------R 220 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + Q + +K I + ++ GD N + N + Sbjct: 221 NLQLELMKKDIE--ESDHENILLVGDLNCTLFSPNINKIKNDKLKDARL-----GFGFQN 273 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ + +N + D SDH PI + Sbjct: 274 SWNAFVPIFRTNIDHIWVSKN---------IKVTNFYRGDFIE-----SDHFPIIAEL 317 >gi|183979969|ref|NP_001038753.2| 2'-phosphodiesterase [Danio rerio] Length = 591 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 39/322 (12%), Positives = 87/322 (27%), Gaps = 37/322 (11%) Query: 19 SVAQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 + +R+VS+NI LS+ + L+++ +ADI+ L Sbjct: 266 TDEGSLRVVSYNILADVYAQTDLSKTVLYPYCAPYALQMDYRQNLIKKELSGYNADIICL 325 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERL--INHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 QE+ V + P R+ H + V + +V + + Sbjct: 326 QEVDKCVFVDLLCPALDAFGLDGVFRIKEKQHEGLATYFRRSKLKLVEQYDVMLSEALTT 385 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF-----CFLDSLENTYSPSCSLL 184 + + + +++ +E + V + C ++ ++ Sbjct: 386 DPIHRQLWEKVSCSPSLKEKIEKRSTTLQVTVLQSLCDPSRILCVGNTHLYWRPEGGNVR 445 Query: 185 SQQAQWLKDWITQKKESLVP---FVIAGDFNRKINY------------LGNNDD------ 223 Q + + Q P + +GDFN + + D Sbjct: 446 LVQIAVALEHMKQVVTEKHPGARLIFSGDFNSTPSSGLFQLLSQGCIPEDHEDWGSGGPE 505 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNE 282 + + N + +DY ++ + S + Sbjct: 506 EQIRLGLTNPFQLSSACGVPDF-TNFVGGFQGCLDYIFVEPRTLQVEQVIPLPSLEEVSN 564 Query: 283 DDIKSRGKRLSDHCPISIDYDF 304 SDH + D + Sbjct: 565 CVALPSISHPSDHIALVCDLKW 586 >gi|196040092|ref|ZP_03107394.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus NVH0597-99] gi|196028947|gb|EDX67552.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus NVH0597-99] Length = 263 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 75/269 (27%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 18 EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ V + ++ + KD+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKDQVNRLMERVD----SNELSFLMGDFNNNARLQG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +++ + Sbjct: 183 EGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKIRSSKVV 242 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ +SDH + + D Sbjct: 243 FNGTNRKI---------ISDHFGVEVQVD 262 >gi|148692768|gb|EDL24715.1| RIKEN cDNA E430028B21 [Mus musculus] Length = 575 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 81/314 (25%), Gaps = 33/314 (10%) Query: 24 VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R VS+NI S L+++ +AD++ LQE+ Sbjct: 261 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDR 320 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + P R+ H + + + L + Sbjct: 321 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFRLLSQHDISFQEALKSDPLHKEL 380 Query: 136 SFSRAGNRRAVELLVEINGK-KIWVLDIHLKSF---CFLDSLENTYSPSCSLLSQQAQ-- 189 A N A E +++ + +I VL S C ++ + + Q Sbjct: 381 LEKLALNPLAQEKVLQRSSVLQISVLQSTTDSSKKICVANTHLYWHPKGGYIRLIQMAVA 440 Query: 190 -WLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPNDSLIR 236 +++ +P + GDFN + + D + S+ Sbjct: 441 LVHIRHVSRDLYPGIPVIFCGDFNSTPSTGMYHFVISGSIAEDHEDWASNGEEERCSMPL 500 Query: 237 FPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGK 290 K N +DY +D + S Sbjct: 501 SHCFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNTLEVEQVIPLPSHEEVTTHQALPSVS 560 Query: 291 RLSDHCPISIDYDF 304 SDH + D + Sbjct: 561 HPSDHIALVCDLKW 574 >gi|134024958|gb|AAI34884.1| Zgc:136374 protein [Danio rerio] Length = 579 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 39/322 (12%), Positives = 87/322 (27%), Gaps = 37/322 (11%) Query: 19 SVAQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 + +R+VS+NI LS+ + L+++ +ADI+ L Sbjct: 254 TDEGSLRVVSYNILADVYAQTDLSKTVLYPYCAPYALQMDYRQNLIKKELSGYNADIICL 313 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERL--INHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 QE+ V + P R+ H + V + +V + + Sbjct: 314 QEVDKCVFVDLLCPALDAFGLDGVFRIKEKQHEGLATYFRRSKLKLVEQYDVMLSEALTT 373 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF-----CFLDSLENTYSPSCSLL 184 + + + +++ +E + V + C ++ ++ Sbjct: 374 DPIHRQLWEKVSCSPSLKEKIEKRSTTLQVTVLQSLCDPSRILCVGNTHLYWRPEGGNVR 433 Query: 185 SQQAQWLKDWITQKKESLVP---FVIAGDFNRKINY------------LGNNDD------ 223 Q + + Q P + +GDFN + + D Sbjct: 434 LVQIAVALEHMKQVVTEKHPGARLIFSGDFNSTPSSGLFQLLSQGCIPEDHEDWGSGGPE 493 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNE 282 + + N + +DY ++ + S + Sbjct: 494 EQIRLGLTNPFQLSSACGVPDF-TNFVGGFQGCLDYIFVEPRTLQVEQVIPLPSLEEVSN 552 Query: 283 DDIKSRGKRLSDHCPISIDYDF 304 SDH + D + Sbjct: 553 CVALPSISHPSDHIALVCDLKW 574 >gi|26353952|dbj|BAC40606.1| unnamed protein product [Mus musculus] gi|74196280|dbj|BAE33039.1| unnamed protein product [Mus musculus] Length = 608 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 81/314 (25%), Gaps = 33/314 (10%) Query: 24 VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R VS+NI S L+++ +AD++ LQE+ Sbjct: 294 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDR 353 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + P R+ H + + + L + Sbjct: 354 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFRLLSQHDISFQEALKSDPLHKEL 413 Query: 136 SFSRAGNRRAVELLVEINGK-KIWVLDIHLKSF---CFLDSLENTYSPSCSLLSQQAQ-- 189 A N A E +++ + +I VL S C ++ + + Q Sbjct: 414 LEKLALNPLAQEKVLQRSSVLQISVLQSTTDSSKKICVANTHLYWHPKGGYIRLIQMAVA 473 Query: 190 -WLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPNDSLIR 236 +++ +P + GDFN + + D + S+ Sbjct: 474 LVHIRHVSRDLYPGIPVIFCGDFNSTPSTGMYHFVISGSIAEDHEDWASNGEEERCSMPL 533 Query: 237 FPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGK 290 K N +DY +D + S Sbjct: 534 SHCFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNTLEVEQVIPLPSHEEVTTHQALPSVS 593 Query: 291 RLSDHCPISIDYDF 304 SDH + D + Sbjct: 594 HPSDHIALVCDLKW 607 >gi|52144875|ref|YP_081954.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus E33L] gi|51978344|gb|AAU19894.1| possible endonuclease/exonuclease/phosphatase family protein [Bacillus cereus E33L] Length = 263 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 76/269 (28%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 18 EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKKDNFGLLLLEELKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ V + ++ + KD+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNVVKEDAFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKDQVNRLMERVD----SNELSFLMGDFNNNARLQG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +++ + Sbjct: 183 EGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKVRSSKVI 242 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ N +SDH + + D Sbjct: 243 FNGTNRNI---------ISDHFGVEVQVD 262 >gi|46395493|ref|NP_996840.1| deoxyribonuclease-1 precursor [Gallus gallus] gi|14194703|sp|Q9YGI5|DNAS1_CHICK RecName: Full=Deoxyribonuclease-1; AltName: Full=Deoxyribonuclease I; Short=DNase I; Flags: Precursor gi|4107168|emb|CAA10503.1| deoxyribonuclease I [Gallus gallus] Length = 282 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 37/284 (13%), Positives = 79/284 (27%), Gaps = 32/284 (11%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVA 81 R+ ++NI T +S + + DI +QE+ + Sbjct: 22 RISAFNIRTFG---------DSKMSNQTVAGFIVSILVQY--DITLVQEVRDADLSSVKK 70 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 V N+ + + R+S + + R V VL+ Y G + + Sbjct: 71 LVSQLNSASSYPYSFLSSIPLGRNSYKEQYV-FIYRSDIVSVLESYYYDDGCESCGTDIF 129 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R + ++ I + + ++ D I + + + Sbjct: 130 SREPFIVKFSSPTTQLDEFVIVPLHAEPSSAP--------AEINALTDVYTDVINKWETN 181 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 GDFN +Y+ + S + + + D V Sbjct: 182 N--IFFMGDFNADCSYVTAEQWPSIRLRSLSSCEWLIPDSADTTVTSTDCAY----DRIV 235 Query: 262 M-DQNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDY 302 + + S + + E +SDH P+ + Sbjct: 236 ACGSALRQAVEYGSATVNNFQETLRIQNKDALAISDHFPVEVTL 279 >gi|319781720|ref|YP_004141196.1| endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167608|gb|ADV11146.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 282 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 37/276 (13%), Positives = 80/276 (28%), Gaps = 53/276 (19%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + S+N++ + D + + +D D++ LQE + Sbjct: 39 VASYNVHKCIGVDRKF-----------DPDRTIRVIREIDPDVIALQEADNRFGDRDGLL 87 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + S + H + + KK V L G R A Sbjct: 88 DLPRLERETGLVPVPISATGKGHGWHGNVLLFKKGVVRDVHQIKLPGL-------EPRGA 140 Query: 146 VELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 V ++++G + + ++ HL SQQA+ + D + P Sbjct: 141 VVAEIDLDGSRTLRIIAAHLGLL-------------RRSRSQQARVVLDLMN--SPDERP 185 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 ++ GD N + ++L + + + +D + ++ Sbjct: 186 TLLLGDLN---------EWRLGNRSALNTLHATFGPQPPAVPTFPSNLPLLALDRIMANR 236 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + I + SDH P++ Sbjct: 237 HGMIAAIDA----------HDTPLSRVASDHLPLTA 262 >gi|116496201|ref|YP_807935.1| metal-dependent hydrolase [Lactobacillus casei ATCC 334] gi|116106351|gb|ABJ71493.1| Metal-dependent hydrolase [Lactobacillus casei ATCC 334] Length = 355 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 44/324 (13%), Positives = 89/324 (27%), Gaps = 65/324 (20%) Query: 21 AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 Q +++NI G S K + + + + + D+ F Q Sbjct: 52 GQTYTAMTYNIGYGSYPPSYSFFMDGGKYSRAYSKKSVRTSINGVIKTTQAQNPDVAFYQ 111 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTER-----------LINHSKRDSNNDIHTAIAVRKKNV 121 E+ ++ + + + + + I K Sbjct: 112 EIDPDGDRSQHVNEVKMVTGAQQQYANIYGQNYDSAYLFYPFTQPIGKAKSGILTLSKAK 171 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP 179 + Y L D RA NGK+ +++IH+ +F Sbjct: 172 VDSSRRYSLPVDTDFNKIIDLDRAFTATKTTVANGKQFVMVNIHMSAFTPN--------- 222 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + Q L +I Q + ++AGD+N ++ K +D + + Sbjct: 223 -VKIQQAQFTKLFKYIEQAYKQGNYVMVAGDYNHRLLKDTAEIFHTKDLDETWTHLFPKS 281 Query: 240 EKDSRCN--------------------ANKNLRNKIPID-YFVMDQNAYKFLIQESFSEI 278 + + + ID Y + N + ES + Sbjct: 282 KLPAGFHIPTMGLAKAAVPSVRALDQPYQPGKSFVTLIDGYIL-SPN----IKAESVHVV 336 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 G + SDH P+ + + Sbjct: 337 ST--------GFQYSDHNPVVLKF 352 >gi|225869981|ref|YP_002745928.1| exodeoxyribonuclease [Streptococcus equi subsp. equi 4047] gi|225699385|emb|CAW92824.1| exodeoxyribonuclease [Streptococcus equi subsp. equi 4047] Length = 275 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 80/305 (26%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + R + DADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTGESPRALLSR------AVLDTLVAQDADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + S + + K ++P +GA + G Sbjct: 55 KHLESLLGYFPNHLNVWRSSVEPARKGYAGTMFLYKKELNPIVTFPDIGAPTTMDAEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V ++ + + L ++ Sbjct: 114 -----IITLEFNDFFVTQVYTPNAGDGLRRLEERQLWDQKYADYLAQL--------DAQK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F N Sbjct: 161 PVLATGDYNVAHKEIDLANPASNHRSPGFTDEERLGFTNLLNRGFTDTFRFIHGDIPNVY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + DH PI Sbjct: 221 SWWAQRSKTSKLNNTGWRIDYWLTSNRLIDKVSRSEMISSGERQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 LLEID 274 >gi|182419446|ref|ZP_02950698.1| endonuclease/exonuclease/phosphatase family protein [Clostridium butyricum 5521] gi|237666690|ref|ZP_04526675.1| endonuclease/exonuclease/phosphatase family protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376777|gb|EDT74349.1| endonuclease/exonuclease/phosphatase family protein [Clostridium butyricum 5521] gi|237657889|gb|EEP55444.1| endonuclease/exonuclease/phosphatase family protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 265 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 38/272 (13%), Positives = 81/272 (29%), Gaps = 43/272 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMG---SYNAVAKVFPKNTWCIFY---------STERLI 99 L + + D++ LQE+ + + ++ + + S Sbjct: 18 DKIKYLAKVISEKNYDVIALQEVSQSIDCKIIDGILKEDNFIVLLKEELNKFTKSNYEFY 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ ++ + +S+ + + D R+ ++ +EIN K++ Sbjct: 78 WDFSHIGYDIYEEGLAIMTRHKFINSESFFITKSMDRTYWK-TRKIIKSSIEINNKEVDF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL + + QA L D + KK + + GDFN Sbjct: 137 YSCHLGW----------WKDDEEPFTYQADKLLDTVNSKKTA----IFMGDFNNNAFVRN 182 Query: 220 NNDDFW--KTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQ 272 D+ K ++ E+ S K +D + N Sbjct: 183 EGYDYLINKNLNDLYLKTDKSDEECSATVKGKIDGWDENKEKLRLDLIL-SNNLL----- 236 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +SDH + ++ DF Sbjct: 237 ---KVKNARVIFNGINKEIISDHYGVELEIDF 265 >gi|6681456|dbj|BAA88714.1| Deoxyribonuclease I [Gallus gallus] Length = 283 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 38/285 (13%), Positives = 79/285 (27%), Gaps = 34/285 (11%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVA 81 R+ ++NI T +S + + DI +QE+ + Sbjct: 23 RISAFNIRTFG---------DSKMSNQTVAGFIVSILVQY--DITLVQEVRDADLSSVKK 71 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 V N+ + + R+S + + R V VL+ Y G + + Sbjct: 72 LVSQLNSASSYPYSFLSSIPLGRNSYKEQYV-FIYRSDIVSVLESYYYDDGCESCGTDIF 130 Query: 142 NRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +R + ++ + + L + E D I + + Sbjct: 131 SREPFIVKFSSPTTQLDEFVIVPLHAEPACAPAEINALTDVYT---------DVINKWET 181 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 + GDFN +Y+ + S + + + D Sbjct: 182 NN--IFFMGDFNADCSYVTAEQWPSIRLRSLSSCEWLIPDSADTTVTSTDCAY----DRI 235 Query: 261 VM-DQNAYKFLIQESFSEILYNE--DDIKSRGKRLSDHCPISIDY 302 V + + S + + E +SDH P+ + Sbjct: 236 VACGSALRQAVEYGSATVDNFQETLHIQNKDALAISDHFPVEVTL 280 >gi|324324468|gb|ADY19728.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 263 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 76/269 (28%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 18 EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ V + ++ + KD+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKDQVNRLMERVD----SNELSFLMGDFNNNARLQG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +++ + Sbjct: 183 EGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKVRSSKVI 242 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ N +SDH + + D Sbjct: 243 FNGTNRNV---------ISDHFGVEVQVD 262 >gi|91774073|ref|YP_566765.1| exodeoxyribonuclease III [Methanococcoides burtonii DSM 6242] gi|91713088|gb|ABE53015.1| Exodeoxyribonuclease III [Methanococcoides burtonii DSM 6242] Length = 251 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 29/271 (10%), Positives = 70/271 (25%), Gaps = 62/271 (22%) Query: 58 RQYAKNLDADIVFLQEMGSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 ++ + DI+ LQE + ++ + + ++ + + + + Sbjct: 13 VEWMEATQPDILCLQETKATETQLPKELRHIHGYVPYFFSAERKGY----------SGVG 62 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + K V + + D R + + + + +I+ + D Sbjct: 63 IYTKVPPVEVKYGLGVPRFDKEGR---------TLIVEFEDFALFNIYFPNGKASDER-- 111 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG---------------- 219 + K++ +I GD N + Sbjct: 112 -----LEYKMDFYNAFMEVADSMKDAGKNVIICGDVNTAHKEIDLARPKQNERSSGFLPQ 166 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-------IPIDYFVMDQNAYKFLIQ 272 + + E +S +++ + IDYF + + Sbjct: 167 EREWIDTFLGHGYLDTLRMFEPESGNYTWWDMKTRARDRNVGWRIDYFFASVSLKDRIRS 226 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 SDHCPI I+ + Sbjct: 227 A-----------YILSDVMGSDHCPIGIEVE 246 >gi|312868313|ref|ZP_07728513.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus parasanguinis F0405] gi|311096058|gb|EFQ54302.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus parasanguinis F0405] Length = 270 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 38/280 (13%), Positives = 73/280 (26%), Gaps = 54/280 (19%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95 + L++ D++ QE+ + V + S Sbjct: 17 QQKFETLKEQILEAKYDVICFQEVNQEMSSEAVETDEFYQALPSAVAIHKDHFVRVLVEE 76 Query: 96 -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148 + ++ +A+ + L+ L+ D + RR Sbjct: 77 LAAQGLHYYWTWAYNHIGYDHLNEGVAILSRQP--LKADEILVSNMDDPTDYHTRRVAVA 134 Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208 ++GK+I V +HL + D P Q PF++A Sbjct: 135 HTSVDGKEIAVASVHL---SWWDKGFQFEWPRIEKYFSQV-------------GKPFILA 178 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRF-----PKEKDSRCNANKNLRNKIPIDYFVMD 263 GDFN G ++ DS I + + + + IDY Sbjct: 179 GDFNNPAGQEGYETILSSPLELQDSFIEAKETKGTYTVGPGIDGWTDNQVPLRIDYVFAS 238 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +SDH + + Sbjct: 239 PE---------WDIQRLHVIFDGQNKSHVSDHYGLEAELS 269 >gi|184199933|ref|YP_001854140.1| hypothetical protein KRH_02870 [Kocuria rhizophila DC2201] gi|183580163|dbj|BAG28634.1| hypothetical protein [Kocuria rhizophila DC2201] Length = 636 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 44/351 (12%), Positives = 89/351 (25%), Gaps = 74/351 (21%) Query: 17 TASVAQKVRLVSWNINT---------------LSEQEGVSLWKNSVKRTTSDYTLL---- 57 T V +V + S+N+ S ++ + R D L Sbjct: 291 TPRVGGQVSVASFNVLNYFTTTGQQKKCKGGNFSTDGTYNVAQGCDVRGAYDAADLQRQQ 350 Query: 58 ---RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN------- 107 L+A +V L E+ + + + + + + + K Sbjct: 351 AKTVAAINQLNASVVGLMEIENSAKLGEEPDEALATLVSALNGAAGYEKWAIAPVDASQL 410 Query: 108 ------NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN-RRAVELLVEIN------- 153 + I AI + ++ ++ L + N R + Sbjct: 411 QPVADQDVITNAIIYQPAEASLMGEAQALGAEAGAGGAFENARTPLAASFTATRGKGRGT 470 Query: 154 GKKIWVLDIHLKSFCFLD------SLENTYSPSCSLLSQQAQWLKDWITQKKES--LVPF 205 I V+ H KS + + QA+ L DWI + + Sbjct: 471 NAPITVVVNHFKSKGSGPKNGPNADAGDGQGAWNAARVAQAEALVDWIPELADRAGSADV 530 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 + GDFN + F + + + +D+ ++ ++ Sbjct: 531 ALLGDFNSYTQEDPMQVFYSAG---------FASAPAADEHTYVHGGQVGSLDHLLVSRS 581 Query: 266 AYKFLIQESFSEIL--------------YNEDDIKSRGKRLSDHCPISIDY 302 + I D + SDH P + Sbjct: 582 LQQRTTGADVWNINSGQSPLLQYAQYRTTALDYYRPDAAASSDHDPAIAGF 632 >gi|109130906|ref|XP_001092143.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2 [Macaca mulatta] Length = 518 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 77/331 (23%), Gaps = 71/331 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+VSWNIN + + + + LDADIV LQE + Sbjct: 2 LRVVSWNINGIRRPVQGVANQEPSNCAAV---AVGRILDELDADIVCLQETKVTRDALTE 58 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKDS 136 + + ++S R + + A V + G D Sbjct: 59 PLAIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGNVGCYGNMDE 118 Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLL 184 F++ R E + + +++++ LL Sbjct: 119 FTQEELRALDSEGRALLTQHKIRTWEGKERILTLINVYCPHADPGRPERLVFKMRFYRLL 178 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230 +A+ L + +I GD N + Sbjct: 179 QIRAEALLA-------AGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDSLLSN 231 Query: 231 NDSLIRFPKEKDSRCN------------------ANKNLRNKIPIDYFVMDQNAYKFLIQ 272 ++L +DY + D+ Sbjct: 232 LGCQSASHVGPFIDSYRCFQPKQEGAFTCWSAVTGARHLNYGSRLDYVLGDRTL------ 285 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 I SDHCP+ Sbjct: 286 ----VIDTFRASFLLPEVMGSDHCPVGAVLS 312 >gi|126738233|ref|ZP_01753954.1| hypothetical protein RSK20926_06852 [Roseobacter sp. SK209-2-6] gi|126720730|gb|EBA17435.1| hypothetical protein RSK20926_06852 [Roseobacter sp. SK209-2-6] Length = 357 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 43/350 (12%), Positives = 92/350 (26%), Gaps = 60/350 (17%) Query: 6 VLALVFFLVPCTASVAQK-VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 +L L+ + + + A + VR+ ++N S + L ++ + T + Q + + Sbjct: 12 LLFLLGLIQSPSPAGAGEGVRIATYNTE-FSRRGPGLLLRDIERGTDPQVKAVLQVIQEI 70 Query: 65 DADIVFLQ------EMGSYNAVAKVFPKNTWCIFYSTERLINHSKR-------------- 104 DI+ LQ E+ + A+ + + N R Sbjct: 71 QPDILLLQGVDWDFELRALKALERKLSLAGHPYPHLFMAQPNRGMRTGLDLDGDGLLNGP 130 Query: 105 -----DSNNDIHTAIAVRKKNVR----------VLQQSYPLLGAKDSFSRAG-------- 141 + IA+ + +L + P Sbjct: 131 GDAQGYARFTGKGGIALLSRLPIANAGVTDLSTLLWKDLPGASLPKGKDGTEYFSKEALD 190 Query: 142 -NRRAVELLV-----EINGKKIWVLDIHLKSFCFLDSLENTY-SPSCSLLSQQAQWLKDW 194 R A NG+ + +L + F + + Q Sbjct: 191 ILRLATTAHWVIPINLTNGQVLQLLCFQAGTPLFDGVEDRNGLRNRDEIRLWQVFLDGAL 250 Query: 195 ITQKKESLVPFVIAGDFNRKINY-LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR- 252 FV+ G N G ++ + P+ + + + Sbjct: 251 PGLPSPPDSQFVLLGGANLDPRRGQGYRSAMRDLLEDSRLQDPAPQGEGGGSETVEWAKA 310 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + Y + ++ L + D + R S H I D Sbjct: 311 GRMRVSYLLPSRDLTV-LDAGVLWPL-----DPEHPANRASRHRLIWADI 354 >gi|118476126|ref|YP_893277.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis str. Al Hakam] gi|118415351|gb|ABK83770.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis str. Al Hakam] Length = 267 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 75/269 (27%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 22 EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 81 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ V + ++ + KD+ R+ V + NGK I Sbjct: 82 WDFSHIGYDVYEEGLAIITKHNVVKEDAFFISENKDTTYWK-TRKIVSATIAYNGKNITF 140 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 141 YSCHLGW----------WNDEEESFKDQVNRLMERVD----SNELSFLMGDFNNNARLQG 186 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +++ + Sbjct: 187 EGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKIRSSKVV 246 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ +SDH + + D Sbjct: 247 FNGTNRKV---------ISDHFGVEVQVD 266 >gi|329910713|ref|ZP_08275356.1| Exodeoxyribonuclease III [Oxalobacteraceae bacterium IMCC9480] gi|327546113|gb|EGF31174.1| Exodeoxyribonuclease III [Oxalobacteraceae bacterium IMCC9480] Length = 256 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 36/271 (13%), Positives = 74/271 (27%), Gaps = 63/271 (23%) Query: 59 QYAKNLDADIVFLQEMGSYNAV--AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 ++ DAD + +QE+ + A ++ + ++ +S + Sbjct: 22 EWMAKQDADFICVQELKAQAADMSPEMLAPEGYHGYFHYAEKKGYSGTGVYSKR------ 75 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + G A R V+ + + ++ ++ S + + Sbjct: 76 --------VPDQVITGFGTPEFDAEGRY-----VQCDYGNLSIVSVYCPSGSSGEERQLA 122 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------LGNN 221 + L K S VI GD+N L Sbjct: 123 KFRFMDVFLPHLAAL-------KASGREVVICGDWNIAHQEIDLKNWKGNKKNSGFLPEE 175 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQ 272 + + +L+ + D R N+ IDY + Sbjct: 176 RAWLSRLFDEVALVDVFRRVDERAEQYTWWSNRGQAWANNVGWRIDYQIATPGIAATAKA 235 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +R SDH P++I+YD Sbjct: 236 VAI-----------YKDERFSDHAPLTIEYD 255 >gi|34499702|ref|NP_903917.1| exodeoxyribonuclease III [Chromobacterium violaceum ATCC 12472] gi|34105553|gb|AAQ61907.1| exodeoxyribonuclease III [Chromobacterium violaceum ATCC 12472] Length = 258 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 84/305 (27%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81 +R+VS N+N + + + + +DAD V +QE+ + Sbjct: 2 LRIVSANLNGIRSADKKGFF---------------DWLAGIDADFVCVQELKAQAGDLSE 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + ++ +S V G + A Sbjct: 47 RMRNPDGLAGYFHYAEKKGYSGVGLYTRHQPDAVV--------------EGLGVDWIDAE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R ++++ K+ V+ ++L S D + + + L+ Sbjct: 93 GRF-----LQLDFGKLSVVSLYLPSGSSSDERQQVKFDFLDVFMPHLEKLRA-------E 140 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKT---------------IDPNDSLIRFPKEKDSRCN 246 VI GD+N N + + + + Sbjct: 141 GRDIVICGDWNIAHNEIDLKNWKGNLKNSGFLPEERAWMTDLLGRVGWRDVWRNLYPEAP 200 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY ++ + + S + ++ SDH P Sbjct: 201 GYTWWSNRGQAYAKDVGWRIDYQIVTPSLMELAESASV-----------YKDEKFSDHAP 249 Query: 298 ISIDY 302 + +DY Sbjct: 250 LIVDY 254 >gi|307945480|ref|ZP_07660816.1| endonuclease/exonuclease/phosphatase [Roseibium sp. TrichSKD4] gi|307771353|gb|EFO30578.1| endonuclease/exonuclease/phosphatase [Roseibium sp. TrichSKD4] Length = 347 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 87/344 (25%), Gaps = 72/344 (20%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKR-------------TTSDYTLLRQYAKNLD----ADI 68 L WN+ L E + VK+ L + ++ DI Sbjct: 6 LAFWNLENLFGPENHPHRLDWVKKDIASDLVGWTQALYDKKLAQLASIIRQMNDGAGPDI 65 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + + E + + + + +I + S I TA K V + Sbjct: 66 LGVCEAEDEHVLKDLINTLAPSLPNRNYSVIAETNDLSYRGIDTAFIYDKGRFSVDEA-- 123 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-----FCFLDSLENTYSPSCSL 183 L+ R G R +++ + N + ++ + ++ + + Sbjct: 124 -LVFNHRVMRRTGTRDILQVTFKTNQGRRELVAMANHWPSRYGGAGPEASAGFRATAGET 182 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 LS + + K+ P + GD N + T + D + + Sbjct: 183 LSYWHSRIFE--EATKKDRTPVIAFGDMNDDPWDRSLTVNALATRERGDVERARSPKFYN 240 Query: 244 RCNAN-------------------KNLRNKIPIDYFVMDQNAYK-------FLIQESFSE 277 N D+ ++++ + S Sbjct: 241 LAWEYLVTPAIDHKGNSRMLEGTLYYNYNGNIFDHLLVNRPLVDANPDSEFKYVDGSGGI 300 Query: 278 ILYNEDDIKSRGKRL-------------------SDHCPISIDY 302 I + E G SDH P+ + Sbjct: 301 IAFPEMVSHRTGDGPIRFGLPEGDAASNVNEAGYSDHFPVGLKI 344 >gi|302564774|ref|NP_001181848.1| deoxyribonuclease-1-like 1 [Macaca mulatta] Length = 302 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 74/301 (24%), Gaps = 40/301 (13%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 AL+F ++ S AQ R+ ++N L+ + L + D Sbjct: 6 ALLFLILV---SGAQAFRICAFNAQRLTL---------AKVAREQVMDTLVRILARC--D 51 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVL 124 I+ LQE+ + A F ++ S + R +VL Sbjct: 52 IMVLQEVVDSSGSAIPLLLRELNRFDASGPYSTLSSPQLGRSTYVETYVYFYRSHKTQVL 111 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSC 181 + R + + ++ +H L Y Sbjct: 112 SSYVY-----NDEDDVFAREPFVAQFSLPSDVLPSLVLVPLHTTPKAVEKELNALYHVFL 166 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + Q ++ GDFN L + + Sbjct: 167 EVSQQW-------------QSKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADG 213 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + I + + L + + + +SDH P+ ++ Sbjct: 214 EDTTVRASTHCAYDRI--VLHGERCRSLLHTAAAFDFPTTFQLTEEEALNISDHYPVEVE 271 Query: 302 Y 302 Sbjct: 272 L 272 >gi|256078810|ref|XP_002575687.1| hypothetical protein [Schistosoma mansoni] gi|238660930|emb|CAZ31920.1| expressed protein [Schistosoma mansoni] Length = 425 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 43/322 (13%), Positives = 97/322 (30%), Gaps = 51/322 (15%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +P +S+ + +R+ SWN+N + + ++ ++ ++ LQE Sbjct: 119 LPRISSIERHIRIGSWNLNRFNLSKAEHPGF---------MEVVCLTILRMNVSLILLQE 169 Query: 74 MGSYNAVAKVFPKNTWCI-----------------FYSTERLINHSKRDSNNDIHTAIAV 116 + + + + + ++ I + + Sbjct: 170 VSDPSVADYLCNELNYPSLPHIKRWVEKFPLSIPPYWKASCSIQPTGSMFRAKEYAVFLY 229 Query: 117 RKKNVRVLQQSYPLLGAKDS---FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 + + ++ L + +S ++ R I + ++ +HLK+ +S Sbjct: 230 NSRCGIRISRTSLLEKSSNSLSVSRKSFTRSPCGASCHIQHVNLVLISVHLKASGLRNSQ 289 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 L L + + S +IAGDFN + + + + Sbjct: 290 IGRTISEIESLGY----LVQAFYETQPSGTYLIIAGDFNLSSTHEAY-----RVLHEHGL 340 Query: 234 LIRFPKEKDSRCNANKNLRNKIP-IDYFVMDQNAY------------KFLIQESFSEILY 280 E+ + N K+ N + D + N +I + L Sbjct: 341 WPVLKGEQQTTTNHCKSGSNHLRAYDNAWLSANLSLTSESTIRWTGDSGVILKGLRHPLI 400 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 E+ +SDH PI D Sbjct: 401 PEETGSGANGLVSDHAPIWFDI 422 >gi|306829996|ref|ZP_07463183.1| exodeoxyribonuclease III [Streptococcus mitis ATCC 6249] gi|304428007|gb|EFM31100.1| exodeoxyribonuclease III [Streptococcus mitis ATCC 6249] Length = 275 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 77/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + Q +ADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K ++P +GA S R Sbjct: 55 KHLEVLEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTITFPEIGAP-STMDVEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +V ++ + + + ++ L Sbjct: 114 I-----ITLEFDDFFVTQVYTPNAGDGLKRLDDRQVWDAKYAEYLATLDQ--------QK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F Sbjct: 161 PVLATGDYNVAHKEIDLANPASNHRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMINSGARQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ + Sbjct: 270 VMEIE 274 >gi|229170375|ref|ZP_04298048.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621] gi|228613072|gb|EEK70224.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621] Length = 263 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 74/269 (27%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS--------- 102 L + + D D++ LQE+ V F + Sbjct: 18 EKIKYLAKAIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELRALNVKEYNII 77 Query: 103 ---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ V + + + KD+ R+ V + N K I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNIVKEDTLFVSENKDTTYWK-TRKIVSATIAYNDKNITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKDQVDRLMERVN----SNELSFLMGDFNNNARLEG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +Q+ + Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKQNLRIDLILSNQSKTVNSSKVI 242 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ N +SDH + + D Sbjct: 243 FNGTNRNV---------ISDHFGVEVQLD 262 >gi|65317801|ref|ZP_00390760.1| COG3568: Metal-dependent hydrolase [Bacillus anthracis str. A2012] Length = 263 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 76/269 (28%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D+V LQE+ V F + Sbjct: 18 EKIKYLAKVIQEEEYDVVALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ V + ++ + KD+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ L Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEELFKGQVNRLMERVD----SNELSFLMGDFNNNARLQG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +++ + Sbjct: 183 EGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKIRSSKVV 242 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ +SDH + + D Sbjct: 243 FNGTNRKI---------ISDHFGVEVXVD 262 >gi|82701358|ref|YP_410924.1| exodeoxyribonuclease III [Nitrosospira multiformis ATCC 25196] gi|82409423|gb|ABB73532.1| exodeoxyribonuclease III [Nitrosospira multiformis ATCC 25196] Length = 259 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 33/307 (10%), Positives = 87/307 (28%), Gaps = 78/307 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81 +R+++ N+N + + ++ DADIV +QE+ + + Sbjct: 1 MRIITLNLNGIRSAANKGFF---------------RWLPLQDADIVCVQELKAQVGDITG 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +V + + ++ +S P + A+ + Sbjct: 46 EVVSPDGYHGYFHCAEKRGYSGVGIYTRQKPG-------GVTEGLGVPEIDAEGRY---- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++ ++ ++ I+ S + + ++ + + + Sbjct: 95 --------LRVDFGQLSIISIYFPSGSAGEHRQ-------AVKYFFMEQFFPMLEKLAAC 139 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD+N + + + + + + + + Sbjct: 140 GSEIILCGDWNIAHKEIDLRNWRSNQKNSGFLPQERAWLTDVFQELGFVDVFRRINPEPD 199 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + S + +R SDH P Sbjct: 200 QYTWWSNRGQAWAKNVGWRIDYQIATPGIAGKANAVSI-----------YKTERFSDHSP 248 Query: 298 ISIDYDF 304 + IDYD+ Sbjct: 249 LIIDYDY 255 >gi|225690560|ref|NP_998318.2| deoxyribonuclease I-like 3 [Danio rerio] Length = 317 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 91/310 (29%), Gaps = 40/310 (12%) Query: 2 IRKYVLALVFF--LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 IR+ +L++ L+ C R+ ++N+ + +S + + Sbjct: 5 IRRILLSIFLLSGLLTC-----YGFRICAFNVQSFG---------DSKSADAKIMNSISR 50 Query: 60 YAKNLDADIVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 DI LQE+ A+ ++ + + + + + Sbjct: 51 IVARC--DICLLQEVRDQKNKAIPRLLEAVNKIGDNDFQYVASERLGRTQTYQEQYVFFY 108 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLE 174 +K+ +L+ Y + A +R + + K+ ++ H ++ Sbjct: 109 RKSTAILKGQYQYPDTQTGDIDAFSREPFVVYFQAPKTLAKEFVLIPQHTTPSNATKEID 168 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 Y + + + GDFN Y+ + + + S Sbjct: 169 ELYDVFVDVKVRW-------------ETENVMFLGDFNAACGYVAKKNRKNIRLYTDPSF 215 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-- 292 ++ I V + + + S + ++ + + + L Sbjct: 216 TWLIQDNVDTTVKESTDCAYDRI--VVHGEPFLRSIKPFSAQPFNFPKEFLLTEAQALEV 273 Query: 293 SDHCPISIDY 302 SDH PI + Sbjct: 274 SDHYPIEVVL 283 >gi|254251096|ref|ZP_04944414.1| Exonuclease III [Burkholderia dolosa AUO158] gi|124893705|gb|EAY67585.1| Exonuclease III [Burkholderia dolosa AUO158] Length = 257 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 83/305 (27%), Gaps = 75/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++ N+N + + + +AD V +QE+ KV Sbjct: 2 MRVITANLNGIRSAAKKGFF---------------DWLGQQNADCVCVQEI-------KV 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + F L ++ + A ++ ++G S R Sbjct: 40 SADDLPAEFVEPHGLRSYFHHAAKKGYSGAGLYSRREP-----DDVIIGFGSSEFDPEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 VE K+ ++ +++ S D + L + Sbjct: 95 Y-----VEARYGKLSIVSVYVPSGSSGDERQQAKYRFMDEFMPHLAEL--------KKKR 141 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N + + + + + + + D R Sbjct: 142 EVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTKLFDDVGYVDVFRTLDPRPEQY 201 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY + S + + SDH P++ Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPGVAATAKSTSI-----------FKDIKFSDHAPLT 250 Query: 300 IDYDF 304 +DYD+ Sbjct: 251 VDYDY 255 >gi|313232077|emb|CBY09188.1| unnamed protein product [Oikopleura dioica] Length = 392 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 82/309 (26%), Gaps = 70/309 (22%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 A R+V+WN+ L + K LD DI+ LQE Sbjct: 127 QAGMFRIVTWNVAGLYACIKKDFC---------------KAVKTLDCDILCLQETK---- 167 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 ++ P E + ++ A+ K+ + Q D F R Sbjct: 168 LSLKKPPPAEIAEQLKEWKYRNYANSEGKAGYSGTAILSKSKPISVQRGIGKTKHDDFGR 227 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 + E K V S L +L+ + S L L Sbjct: 228 SCT-----AEFE---KFFLVTSYVPNSGRGLVNLDYRTNEWESDLRNYLTKLNK------ 273 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDF----------------WKTIDPNDSLIRFPKEKDS 243 P + GD N + +D + + + + K + Sbjct: 274 --DKPVIYCGDLNVAHTAIDLKNDKSNYNKSAGYTQAEIDELEKLLELGYVDAYRKLYPA 331 Query: 244 RCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + +DYF+M + ED + + SD Sbjct: 332 EEDCYTFWSYMGGARSKNVGWRLDYFLM------KIKDCEEWI----EDVVVHSKVQGSD 381 Query: 295 HCPISIDYD 303 HCP+ I + Sbjct: 382 HCPVEIKLN 390 >gi|291514133|emb|CBK63343.1| Exonuclease III [Alistipes shahii WAL 8301] Length = 297 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 37/334 (11%), Positives = 93/334 (27%), Gaps = 78/334 (23%) Query: 2 IRKYVLALVF------FLVPCTA-SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54 I+K A++ V C S + ++++ +NI ++ TT Sbjct: 4 IQKLTAAILLTASCAGLSVSCVPRSETKNLKIICYNILYGMRRD-----------TTQGK 52 Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 L ++ + + DI+ LQE+ + + + + + Sbjct: 53 RLFAEWVRQQNPDILALQEVNDFTQFTLETLAAEYGHDYAVISKDPKLIPGSVGSRTKFP 112 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 +++ K+ V + ++ G + VL ++ + Sbjct: 113 VSISSKSPVVNVDKVLDNMWHG-----------FIKCKVEGYNVIVLHLNPHLY------ 155 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN--RKINYLGNNDDFW------ 225 ++ + + + + Q ++I GDFN ++ D + Sbjct: 156 --------EARRREIRTVLETVKQ-SGLFEKWIIMGDFNTVSPLDSAVYADGKYLQRKKE 206 Query: 226 -------KTIDPNDSLIR----------FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 P+ L F + + ID+ + + Sbjct: 207 QEKVHTRNNNLPDGQLDFAVSQAILDFGFVDAGWADRENYRKDGFTRRIDFIYVSPDLRD 266 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + + SDH P+ + Sbjct: 267 RIVSCRYITDDFTAAY--------SDHIPVELVL 292 >gi|190405580|gb|EDV08847.1| inositol phosphosphingolipids phospholipase C [Saccharomyces cerevisiae RM11-1a] gi|256273772|gb|EEU08697.1| Isc1p [Saccharomyces cerevisiae JAY291] gi|259145925|emb|CAY79185.1| Isc1p [Saccharomyces cerevisiae EC1118] gi|323333910|gb|EGA75299.1| Isc1p [Saccharomyces cerevisiae AWRI796] gi|323337923|gb|EGA79162.1| Isc1p [Saccharomyces cerevisiae Vin13] gi|323348959|gb|EGA83195.1| Isc1p [Saccharomyces cerevisiae Lalvin QA23] Length = 477 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 40/328 (12%), Positives = 91/328 (27%), Gaps = 62/328 (18%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-----------------QYA 61 S A ++ +++N L + K+ +R + L Sbjct: 34 SKAYSIKFLTFNTWGL-----KYVSKHRKERLRAIADKLAGHSTLTPISDELLPNGGDSN 88 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 +N D D++ LQE+ + S AI + Sbjct: 89 ENEDYDVIALQEIWCVEDWKYLAS-----ACASKYPYQRLFHSGILTGPGLAILSKVPIE 143 Query: 122 RVLQQSYPL---LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 +P+ A + ++ + I +++ H+ + + Sbjct: 144 STFLYRFPINGRPSAVFRGDWYVGKSIAITVLNTGTRPIAIMNSHMHAPYAKQG----DA 199 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF--------WKTIDP 230 S QA I +++ ++ GD N + L + W+ + Sbjct: 200 AYLCHRSCQAWDFSRLIKLYRQAGYAVIVVGDLNSRPGSLPHKFLTQEAGLVDSWEQLHG 259 Query: 231 NDSLIRFPKEKD--------SRCNA--NKNLRNKI-----PIDYFVMDQNAYKFLIQESF 275 L + + C++ N + +DY ++D + + + Sbjct: 260 KQDLAVIARLSPLQQLLKGCTTCDSLLNTWRAQRQPDEACRLDYALIDPDFLQTVDAG-- 317 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + I +SDH S + Sbjct: 318 ---VRFTERIPHLDCSVSDHFAYSCTLN 342 >gi|290961878|ref|YP_003493060.1| hydrolase [Streptomyces scabiei 87.22] gi|260651404|emb|CBG74526.1| putative hydrolase [Streptomyces scabiei 87.22] Length = 489 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 70/301 (23%), Gaps = 53/301 (17%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 +R+++WN+ R + AD+V LQE Sbjct: 217 PDGPALRVMTWNLWHGGT------------RVRDHRAKQLEVITETGADVVGLQETYGTA 264 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 A ++ W + + L + ++ + P +G + Sbjct: 265 A-RELADALGWYHHQAGDNLG----------------IISRHPITARFGDPDVGFYGAAG 307 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R V++ + F + Q + I Sbjct: 308 -VRVRTGSGAEVDVWTVHLDYKPYGPYEAAFDGLEAAELIAHEEVRLAQLRDCLRRID-- 364 Query: 199 KESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 VP V+ GDFN + + + D P + + + Sbjct: 365 --GSVPVVLVGDFNSPSHLDRPDVDWPVTLAAETAGLRDSYREAHPDPVRQPGHTWSPIH 422 Query: 251 ---------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + ID+ + L + SDH + Sbjct: 423 VEHEDGSGRPEPQDRIDFVLHRG--LTVLDSRTCVSGTPRPWPDVEDNDWPSDHAAVITT 480 Query: 302 Y 302 + Sbjct: 481 F 481 >gi|293571332|ref|ZP_06682364.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecium E980] gi|291608597|gb|EFF37887.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecium E980] Length = 274 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 82/310 (26%), Gaps = 66/310 (21%) Query: 24 VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++++ N + L E+ + Q + D++ LQE+ Sbjct: 1 MKIMTLNTHSWLEEEP------------QEKLKQIAQKICHEQYDVIALQEVNQTMDAKG 48 Query: 83 V----------------FPKNTWCIFY--------STERLINHSKRDSNNDIHTAIAVRK 118 + + + T A+ Sbjct: 49 LTSEQLKNFSQVQEQTPVRSDNFAYCLIQLLAEQGETYYWSWEMSHIGYAIYEEGNALLS 108 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K L L+ R+ + + + I V H + S Sbjct: 109 KQP--LTSQTHLVSETKEKEDYHTRKILVGQTSVKTQCITVASCHFSWWVDEKSG----- 161 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + + L+ + P + GDFN G + + D+ Sbjct: 162 -----FAFEWKELEASL---APLTTPLYLLGDFNNPAEGSGYDLVAKSQLPIRDAYPIAQ 213 Query: 239 KEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 K++ + +N + + IDY + Q+ + Y G +S Sbjct: 214 KKQAEATIEKRIDGWENNKEGLRIDYIYVPQDCF---------VTSYQRIFDGENGPIVS 264 Query: 294 DHCPISIDYD 303 DH +++ + Sbjct: 265 DHYGVAVTLE 274 >gi|254465689|ref|ZP_05079100.1| endonuclease/exonuclease/phosphatase family protein [Rhodobacterales bacterium Y4I] gi|206686597|gb|EDZ47079.1| endonuclease/exonuclease/phosphatase family protein [Rhodobacterales bacterium Y4I] Length = 234 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 40/284 (14%), Positives = 69/284 (24%), Gaps = 57/284 (20%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 +R+ ++NI + Q L AD+ LQE Sbjct: 5 PPPDALRIATYNIQKCVGMD-----------LRRRPERTLQVLSGLGADVAVLQEADKR- 52 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + + + + ++ S A+ R + L G Sbjct: 53 LPPRPAALPHFLVEETGWQAVDLGGAGSLGWHGNAVLFRDSVRLRAEGHIALPGL----- 107 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R AV L E + V+ HL +Q Sbjct: 108 --EPRGAVWALFETEAGLVRVIGAHLGLTG-------------RARREQM---HALARAA 149 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + V+AGDFN + + I P + + + LR +D Sbjct: 150 EADDAAVVLAGDFN-----EWSRSPVLEHIAPALTFL-------PPKASFPALRPLGALD 197 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + SDH P+ D Sbjct: 198 RIAHCRRLEA--VAHGVH--------GARPAHIASDHLPVWADL 231 >gi|194333003|ref|YP_002014863.1| exodeoxyribonuclease III Xth [Prosthecochloris aestuarii DSM 271] gi|194310821|gb|ACF45216.1| exodeoxyribonuclease III Xth [Prosthecochloris aestuarii DSM 271] Length = 258 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 29/306 (9%), Positives = 71/306 (23%), Gaps = 79/306 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 +++ +WN+N + + L + DI+ LQE+ + Sbjct: 1 MKIATWNVNG----------------IRARKSALYDWVVGTMPDILILQELKADEESIPD 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + F++ + VR + + D +R Sbjct: 45 EILSLEGYSKFWNGSTFKKGYSG-------VGMLVRDDLNGNDGCYHYEIPDFDIENR-- 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 V ++G+ ++ ++ + + +I + Sbjct: 96 -------TVVLHGRGFSLIGTYVPRGEGDAHYGVK--------LNYLEGVATYIGGLLDE 140 Query: 202 LVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ GD N + + + R Sbjct: 141 GREIILTGDMNVAHTALDVHHSQNKPGAVGLRAEERSALDRQL-QLGLHDIMRERHPGRE 199 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 ID F + + ++ SDH Sbjct: 200 GLYTWWPYWKGARERNLGWRIDCFYLSGGLLSQVQDVVVDI-----------EEKSSDHA 248 Query: 297 PISIDY 302 P+ +D Sbjct: 249 PVILDI 254 >gi|317058560|ref|ZP_07923045.1| endonuclease/exonuclease/phosphatase [Fusobacterium sp. 3_1_5R] gi|313684236|gb|EFS21071.1| endonuclease/exonuclease/phosphatase [Fusobacterium sp. 3_1_5R] Length = 269 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 36/299 (12%), Positives = 92/299 (30%), Gaps = 54/299 (18%) Query: 22 QKVRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +K++L++ N++ L ++ LL + D++ +QE+ Sbjct: 3 KKMKLLTINVHSWL------------EEKQEEKMELLAKVIAEKRYDVIAMQEVNQKIEA 50 Query: 81 AKVFPKNTWCIFYS------------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + + F + IA+ ++ + ++ + Sbjct: 51 RLLKGEIREDNFLYQLCKKIEKYTEEKYEYHWSHSHIGFDIYEEGIALLTRHSILEKEDF 110 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 +K +S + +R+ V++ +EI GK+I H+ ++ + Sbjct: 111 YCTNSKTVYSIS-SRKIVKIFLEIEGKEIEFYSCHMNLPNCIEENMEQNIQN-------- 161 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRK--INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 I + ++ GDFN + + + + +L + + + Sbjct: 162 ------ILKHSSRNCLKILMGDFNTDAFHDQSSYQKILEQGLFDSYTLSKKKDDGVTVYK 215 Query: 247 ANKNLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N + +DY + + F+ Y +SDH + + Sbjct: 216 NISGWENSVEEKRLDYIFLTEQYEVESSYVIFNGKNYPC---------ISDHNGLEVIL 265 >gi|197334477|ref|YP_002155962.1| endonuclease/exonuclease/phosphatase [Vibrio fischeri MJ11] gi|197315967|gb|ACH65414.1| endonuclease/exonuclease/phosphatase [Vibrio fischeri MJ11] Length = 325 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 83/320 (25%), Gaps = 50/320 (15%) Query: 31 INTLSEQEGVSLWKNSVKRTTSDYTL---LRQYAKNLDADIVFLQEMGSYNAVAKVFPKN 87 + E ++ R L++D++ QE+ S NA+ + + Sbjct: 1 MFNFVEPPNAFYDFENILTQDEWLKKQGWFRDKITELNSDVIGFQEVFSPNALEALVNEL 60 Query: 88 TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKDSFSRAGNRRAV 146 + F + + + N A A R + + + NR V Sbjct: 61 GYAYFCTVDEPKSEDG-YVFNSPIVAFASRYPILSAQPVIAEKEQLERFGIEFEFNRIPV 119 Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS--------------------LLSQ 186 +E+ I + E Sbjct: 120 HASIELPHLGITDCYVVHFKSQRPKEPEVNNEIDEENLSSLNQLHDEQLGSWLSTVQRGL 179 Query: 187 QAQWLKDW-ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-------- 237 +A L + I Q+K++ V+ GDFN+ + + + + + Sbjct: 180 EANILHNHIIQQRKKTSQAVVVMGDFNKPLFHDEFKGLLSHELRFDKFSSDYLALFQLKD 239 Query: 238 ----------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD--- 284 + R + + + +DY ++ I Y D Sbjct: 240 SWDIYSELKGTDLLEKRAHTHYHGAKGSVLDYILLSNEFDSSFSGNILEIIDYTVTDKHI 299 Query: 285 ---IKSRGKRLSDHCPISID 301 + +DH +SI Sbjct: 300 VNPRFDIDQFSTDHALVSIT 319 >gi|83595025|ref|YP_428777.1| exodeoxyribonuclease III xth [Rhodospirillum rubrum ATCC 11170] gi|83577939|gb|ABC24490.1| Exodeoxyribonuclease III xth [Rhodospirillum rubrum ATCC 11170] Length = 249 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 25/273 (9%), Positives = 62/273 (22%), Gaps = 55/273 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + + ++ D++ LQE+ + + + + + + + Sbjct: 1 MARLVESRAIDVLCLQEIKARPDHVPTAALAEMGLVHQALHTMP---------GYNGVGI 51 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + + D R A + +++ + D + Sbjct: 52 FSRLPLEDSTPFDWCDRVDCRH-LRTRVA----------GFTLHCLYIPAG--GDIPDPE 98 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND-------------- 222 +P L DW + + +P ++ GDFN D Sbjct: 99 ENPRFRHKLAFFDALTDWFDRTLDPDMPAMVVGDFNVAPLETDVWDHRKMRGVVSHTPVE 158 Query: 223 --DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI----------PIDYFVMDQNAYKFL 270 + + + +D+ + L Sbjct: 159 VAKLGALQASGPWIDAMRRFVPPEEKLFTWWSYRAKDWRLTNRGRRLDHIWVTPALVDRL 218 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + SDH P+ + D Sbjct: 219 RGLEVMDDT-------RDWTPPSDHVPVIVHID 244 >gi|317148498|ref|XP_001822371.2| endonuclease/exonuclease/phosphatase family protein [Aspergillus oryzae RIB40] Length = 325 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 38/300 (12%), Positives = 89/300 (29%), Gaps = 29/300 (9%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---- 78 +R+++ NI + + K +R L +N DA + LQE+ Sbjct: 8 PLRILTNNIRY-ATKSPFKGEKPWEERRQPLLNQLLYNTRNQDA-FICLQEVLHDQLIDI 65 Query: 79 ---------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 A + ++ W + + S ++ + V P Sbjct: 66 HSGLNREHSAASAEAGEDAWAYIGVGRDDGHEAGEYSPIFYRPSVWQLRHWETVWLSETP 125 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + +K S+ A R + + + +L ++ D + + ++ ++ Sbjct: 126 HVPSK-SWDAASIRIVTIGVFTHHTSRQTILAMNTHL---DDQGSRSRFEAAHIILRKID 181 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-AN 248 + + K+ + + GD N + + D+ + + Sbjct: 182 EYES--GEHKDVISAVFLTGDLNSEETQEAYSVLTGNESTLIDAAKAVDPVEHYGNHLTW 239 Query: 249 KNLRN----KIPIDYFVMDQNAYKFLIQES--FSEILYNE-DDIKSRGKRLSDHCPISID 301 IDY ++ + L + Y+ + G SDH + +D Sbjct: 240 TGFGYEKEDPSRIDYVLLGPRPMEVLNNGGQPWKVEGYSVLANRFDDGVFNSDHRAVVVD 299 >gi|291393905|ref|XP_002713317.1| PREDICTED: deoxyribonuclease I-like 3 [Oryctolagus cuniculus] Length = 307 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 36/285 (12%), Positives = 88/285 (30%), Gaps = 32/285 (11%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-----A 79 +L S+N+ + S + ++ + K DI+ L E+ N Sbjct: 24 KLCSFNVRSFGY---------SKRENRQAMDVIVKIIKRC--DIILLMEIKDSNNMICPT 72 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + N+ + + R+ + + A ++K V V +++Y + + Sbjct: 73 LMEKLNGNSRRGITYNYVISSRLGRNVYKEQY-AFLYKEKLVTV-KKNYLYHDYEAGDAD 130 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 A +R + + + I S + + D + Sbjct: 131 AFSREPYVVWFQSPFTAVKDFVIVPLHTSP--------EASVKEIDELVDVYMDVKRRWN 182 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 F+ GDFN +Y+ + + + +++ I Sbjct: 183 AEN--FIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDEEDTTVKKSTSCAYDRI-- 238 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 + Q+ + ++ +S + + + + L SDH P+ Sbjct: 239 VLRGQDIIRSVVPDSNGVFDFRKAYKLTEEEALDVSDHFPVEFKL 283 >gi|189234750|ref|XP_974371.2| PREDICTED: similar to GA16037-PA [Tribolium castaneum] Length = 562 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 37/347 (10%), Positives = 90/347 (25%), Gaps = 67/347 (19%) Query: 24 VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++ +N+ + + ++ S + + + ++ ADI+ LQE+ Sbjct: 200 FTVMCYNVLCDKYATRQMYSYCPSWALNWDYRKKGILEEIRHYSADIINLQEVEMEQFYN 259 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137 P+ + + +K + ++ AI R ++++ Sbjct: 260 YFLPELKQDGYAGIYSPKSRAKHMAESERKYVDGCAIFYRTSKFTLIKEHLVEFNQLAMA 319 Query: 138 SRAGNRRAVELLVEINGKKIWV----------------------LDIHLKSFCFLDSLEN 175 + G + ++ + + + + + + Sbjct: 320 NADGLDHMLNRVMPKDNIGLAALLQTTEAAWENTPADAPFIQQPILVCTAHIHWDPEFCD 379 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPF---------VIAGDFNRKINYL-------- 218 +LS + + + D Q + V+ GDFN + Sbjct: 380 VKLIQTMMLSNELKSILDKSAQALRASENVNADPNSIQLVLCGDFNSLPDSGVIEFLSTG 439 Query: 219 ------------GNNDDFWKTIDPNDSLIRFPKEKDSRCN-------ANKNLRNKIPIDY 259 K + + K + N K IDY Sbjct: 440 RVSQDHKDFKDFSYKQCLEKVLSCDKPNEFTHSFKLASAYNDEIMPFTNYTFDFKGIIDY 499 Query: 260 FVMDQNA---YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + L S + N+ SDH P+ ++ + Sbjct: 500 IFYAKQTMTPLGLLGPISSEWLTQNKVIGCPHPHVFSDHFPLLVELE 546 >gi|171060718|ref|YP_001793067.1| exodeoxyribonuclease III Xth [Leptothrix cholodnii SP-6] gi|170778163|gb|ACB36302.1| exodeoxyribonuclease III Xth [Leptothrix cholodnii SP-6] Length = 262 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 35/274 (12%), Positives = 81/274 (29%), Gaps = 58/274 (21%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L + + + D + +QE+ + +A + + + ++ + + Sbjct: 19 LIPWVEAAEIDCMGVQELKAQHA--------DLTADMTVLHGMQGHFHCAEKKGYSGVGL 70 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 ++ ++G + A R VE + +K+ ++ + S D + Sbjct: 71 YSRHEPSDV----VIGLGHADFDAEGRY-VEARYDTPQRKLSIISCYFPSGSSGDERQQA 125 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGN 220 L+ + L ++ FV+ GD N Sbjct: 126 KFRFLDLIEPHLRAL--------KAGREFVLMGDVNIAHQEIDLKNWKGNLKNSGFLPEE 177 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCN-ANKNLRNK---------IPIDYFVMDQNAYKFL 270 + + + + + + + A N+ IDY + Sbjct: 178 RAWMTRLLGDTGLVDVYRRLRPDATDEAYTWWSNRGQARAKNVGWRIDYHLATPGLAATA 237 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + S + + SDH P++IDYDF Sbjct: 238 RETSI-----------YKAQWFSDHAPLTIDYDF 260 >gi|86130871|ref|ZP_01049470.1| exodeoxyribonuclease III (Xth) [Dokdonia donghaensis MED134] gi|85818282|gb|EAQ39442.1| exodeoxyribonuclease III (Xth) [Dokdonia donghaensis MED134] Length = 254 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 90/305 (29%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81 +++VS+N+N + + K D D+V LQE + Sbjct: 1 MKIVSYNVNGIRAALRKDF---------------ALWLKQTDPDVVLLQETKATPDQVDV 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 VF + + ++ + + + + +AV K + G + Sbjct: 46 AVFEELGYEHYWFSAQKKGY----------SGVAVLTKKTP----KHIEYGTGIASMDFE 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + ++ + V+ ++L S S + L+D++ + K+ Sbjct: 92 GRN-----IRVDFDDVSVMSMYLPSGT--------NSARLEHKLEYMDLLQDYVNELKQD 138 Query: 202 LVPFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNA 247 VI GD+N + +D W I + + + Sbjct: 139 KPNLVIGGDYNICHEAIDIHDPVRNKKVSGFLPVEREWIGNFMESGFIDSFRHLNKEPDN 198 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY ++ + + + + SDHCP Sbjct: 199 YTWWSYRANARANNKGWRIDYNMVSEPLKDKISRAIIL-----------SDAKHSDHCPH 247 Query: 299 SIDYD 303 ++ D Sbjct: 248 MVELD 252 >gi|310779140|ref|YP_003967473.1| Endonuclease/exonuclease/phosphatase [Ilyobacter polytropus DSM 2926] gi|309748463|gb|ADO83125.1| Endonuclease/exonuclease/phosphatase [Ilyobacter polytropus DSM 2926] Length = 281 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 98/305 (32%), Gaps = 33/305 (10%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 + + L +FL+ + + + S+N L + DY + ++ Sbjct: 1 MNFFKKILTYFLISFSVFSQEAY-IASFNSLHLGWDKN------------KDYKSITEFL 47 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKN 120 D++ LQE+ + V K+ + + + ++S + A + Sbjct: 48 SLF--DLIGLQEVMKKDGVKKLTAELERTTGEKWKYLISDYSVGTKRYREYYAYIWKDDK 105 Query: 121 VRVLQQS--YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 V+++ + + + + R R+ +I + H+ Sbjct: 106 VKLINKRRGFYKSDNETADKREYMRKPYGADFKIGEFDFTYVLCHVVYG--------DSI 157 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + + E+ +I GDFN L DD ++ + ++ I + Sbjct: 158 RERRAEAYLLDKVYTYFQDIDENEQDILIGGDFN-----LPAYDDSFRRLFSHEDQIFYG 212 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ++ K D K S I + + + K +SDH P+ Sbjct: 213 IDPVNKTTIGKK-GLSNSYDNIFYSYRYTKEFTGNS-GVIDFTQGNYSEVRKSISDHLPV 270 Query: 299 SIDYD 303 I+ D Sbjct: 271 FIEVD 275 >gi|297820690|ref|XP_002878228.1| hypothetical protein ARALYDRAFT_907339 [Arabidopsis lyrata subsp. lyrata] gi|297324066|gb|EFH54487.1| hypothetical protein ARALYDRAFT_907339 [Arabidopsis lyrata subsp. lyrata] Length = 602 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 91/347 (26%), Gaps = 64/347 (18%) Query: 20 VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A ++S+NI +T + + S L + AD+V LQE+ S Sbjct: 247 SAGSFTVLSYNILSDTSASSDLYSYCPPWALSWPYRRQNLLREIVGYRADVVCLQEVQSD 306 Query: 78 NAVAKVFPK---NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + P+ + + Y + S S D R + V + A Sbjct: 307 HFHEIFAPELEKHGYQALYKRKTNEVLSGSTSAIDGCATFFRRDRFSHVKKYDVEFNKAA 366 Query: 135 DSFSRA-----GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT-----------YS 178 S + A R A+ LV+ N I VL+ + S + Sbjct: 367 QSLTDALIPQTQKRAALNRLVKDNIALIVVLEAKFGNQPTDPSGKRQLICVANTHVNVQQ 426 Query: 179 PSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + Q L + + + +P ++ GDFN + +DP + Sbjct: 427 DLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNTIPGSAPHTLLVMGKVDPGHPDLAV 486 Query: 238 PK-----------------------------------------EKDSRCNANKNLRNKIP 256 + N Sbjct: 487 DPLNILRPHTKLTHQLPLVSAYSSFVRNGMGVGLEQHRRRIDLNTNEPLFTNCTRDFIGT 546 Query: 257 IDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 DY + + E E +D + S+H + ++ Sbjct: 547 HDYIFYTADTLMVESLLELLDEDGLRKDTALPSPEWSSNHIALLAEF 593 >gi|119585747|gb|EAW65343.1| 2'-phosphodiesterase, isoform CRA_b [Homo sapiens] Length = 436 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 36/319 (11%), Positives = 76/319 (23%), Gaps = 43/319 (13%) Query: 24 VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R VS+NI S L+++ +AD++ LQE+ Sbjct: 122 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDR 181 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKN------------VRV 123 + P R+ H + ++ + + Sbjct: 182 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFYEALESDPLHKEL 241 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L++ A++ + + V +L + + + Sbjct: 242 LEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVA 301 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPN 231 L ++ +P + GDFN + + D + Sbjct: 302 L-----AHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEER 356 Query: 232 DSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDI 285 ++ K N +DY +D + S Sbjct: 357 CNMSLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQA 416 Query: 286 KSRGKRLSDHCPISIDYDF 304 SDH + D + Sbjct: 417 LPSVSHPSDHIALVCDLKW 435 >gi|119120921|ref|NP_001073156.1| deoxyribonuclease-1-like 2 [Monodelphis domestica] gi|82659555|gb|ABB88875.1| deoxyribonuclease 1-like 2 [Monodelphis domestica] Length = 288 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 37/285 (12%), Positives = 78/285 (27%), Gaps = 35/285 (12%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AV 80 KVR+ ++NI + +S + + Q D+ +QE+ + AV Sbjct: 31 KVRVGAFNIRSFG---------DSKVADPACGNYIAQILAEY--DVTLVQEVRDPDLSAV 79 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + + Y+ + + N R + + VL Sbjct: 80 SALLEEINRISEYTYSYVASEPLGRDNYKEMYLFVYRTETISVLDSYCYPDPE-----DV 134 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +R + + + + N + +L + W Sbjct: 135 FSREPFIVKFSSPNTAVKEFVLVPLH----SAPHNAVAEIDALYDVYLHVIDKW------ 184 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 + GDFN Y+ ND + ++ + N + D Sbjct: 185 GTDDILFLGDFNADCKYVRPNDWAKIRLRTSEIFKWLIPDDTDTTVGNSDCAY----DRI 240 Query: 261 VMDQN-AYKFLIQESFSEILYNEDDIKS--RGKRLSDHCPISIDY 302 V + K + S + + +SDH P+ + Sbjct: 241 VACGSHLRKCIAPNSAMVNNFQKSFSLDQTAALAISDHFPVEVTL 285 >gi|91082233|ref|XP_972708.1| PREDICTED: similar to 2-phosphodiesterase [Tribolium castaneum] gi|270007451|gb|EFA03899.1| hypothetical protein TcasGA2_TC014029 [Tribolium castaneum] Length = 571 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 37/323 (11%), Positives = 85/323 (26%), Gaps = 38/323 (11%) Query: 20 VAQKVRLVSWNINTLSEQEGV-------SLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 R+VS+NI + L + + D++ LQ Sbjct: 247 SGDTFRVVSYNILADLYCDSDFTREVLHPYCPPYALAIDYRKQLFIKEITGYNGDLICLQ 306 Query: 73 EMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH------TAIAVRKKNVRV 123 E+ + +F + + + +R + T V + Sbjct: 307 EVDRKIYNYDLQPLFEQLGYDSDFCIKRGSVAEGLACFYNRERFKCLETFRLVLSDELNT 366 Query: 124 LQQSYPLLGAKDSFSRAGNRR-----AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + + R +++ + + + VL + F ++ Sbjct: 367 NSLFSDIWAKIEGNKNLTERILNRSTVLQVNILESLENDEVLVVGNTHLYFHPDADHIRL 426 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-----------NYLGNNDDFWKT 227 + + + + L D K + + ++ GDFN + ++ DF Sbjct: 427 LQGAAIIRYLEHLMDEFRNKYKKRLSLILCGDFNSTPECGIYQLYTTGHVPEDHIDFKSN 486 Query: 228 IDPNDSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYN 281 + + + + N +DY +N + S N Sbjct: 487 AEEAIKVPLSQSLRLFSACGTPKYTNFTAGFADCLDYIYFESKNFEVVQVVPFPSLEELN 546 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 + SDH + D + Sbjct: 547 QHTALPSIVFPSDHISLISDLKW 569 >gi|886276|gb|AAB00495.1| DNase I [Homo sapiens] gi|1203972|gb|AAA92647.1| DNase I-like protein [Homo sapiens] Length = 302 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 72/301 (23%), Gaps = 40/301 (13%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 AL+F ++ AQ R+ ++N L+ + L + D Sbjct: 6 ALLFLILAN---GAQAFRICAFNAQRLTL---------AKVAREQVMDTLVRILARC--D 51 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVL 124 I+ LQE+ + A F + S + R +VL Sbjct: 52 IMVLQEVVDSSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVL 111 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSC 181 + R + + ++ +H L Y Sbjct: 112 SSYVY-----NDEDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFL 166 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + ++ GDFN L + + Sbjct: 167 EVSQHW-------------QSKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADG 213 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + + + + L + + + + +SDH P+ ++ Sbjct: 214 EDTTVRASTHCTYARV--VLHGERCRSLLHTAAAFDFPTSFQLTEEEALNISDHYPVEVE 271 Query: 302 Y 302 Sbjct: 272 L 272 >gi|65318105|ref|ZP_00391064.1| hypothetical protein Bant_01001334 [Bacillus anthracis str. A2012] Length = 206 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 69/189 (36%), Gaps = 20/189 (10%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ T E S +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y N+ V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI 195 Q + ++D+I Sbjct: 198 QLKEIQDFI 206 >gi|323355424|gb|EGA87248.1| Isc1p [Saccharomyces cerevisiae VL3] Length = 477 Score = 72.3 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 40/328 (12%), Positives = 91/328 (27%), Gaps = 62/328 (18%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-----------------QYA 61 S A ++ +++N L + K+ +R + L Sbjct: 34 SKAYSIKFLTFNTWGL-----KYVSKHRKERLRAIADKLAGHSTLTPISDELLPNGGDSN 88 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 +N D D++ LQE+ + S AI + Sbjct: 89 ENEDYDVIALQEIWCVEDWKYLAS-----ACASKYPYQRLFHSGILTGPGLAILSKVPIE 143 Query: 122 RVLQQSYPL---LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 +P+ A + ++ + I +++ H+ + + Sbjct: 144 STFLYRFPINGRPSAVFRGDWYVGKSIAITVLNTGTRPIAIMNSHMHAPYAKQG----DA 199 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF--------WKTIDP 230 S QA I +++ ++ GD N + L + W+ + Sbjct: 200 AYLCHRSCQAWDFSRLIKLYRQAGYAVIVVGDLNSRPGSLPHKFLTQEAGLVDSWEQLHG 259 Query: 231 NDSLIRFPKEKD--------SRCNA--NKNLRNKI-----PIDYFVMDQNAYKFLIQESF 275 L + + C++ N + +DY ++D + + + Sbjct: 260 KQDLAVIARLSPLQQLLKGCTTCDSLLNTWRAQRQPDEACRLDYALIDPDFLQTVDAG-- 317 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + I +SDH S + Sbjct: 318 ---VRFTERIPHLDCSVSDHFAYSCTLN 342 >gi|170703197|ref|ZP_02894004.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria IOP40-10] gi|170131894|gb|EDT00415.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria IOP40-10] Length = 257 Score = 72.3 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 85/307 (27%), Gaps = 79/307 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+++ N+N + + ++ +AD V +QE + + + A Sbjct: 2 MRVITANLNGIRSAAKKGFF---------------EWLGEQNADCVCVQEIKVSADDLPA 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + ++ +S + + +G S Sbjct: 47 DFVEPHGFRSYFHHAEKKGYSGAGVYSRHEPDDVI--------------IGFGSSEFDPE 92 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R VE K+ V+ +++ S + + L +S Sbjct: 93 GRY-----VEARYGKLSVVSVYVPSGSSGEERQQAKYRFMDEFMPHLAEL--------KS 139 Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246 ++ GD N + + + + + + + D R Sbjct: 140 KREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTQLFDDVGYVDVFRTLDPRPE 199 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY + + S + + SDH P Sbjct: 200 QYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKRTSI-----------FKDIKFSDHAP 248 Query: 298 ISIDYDF 304 +++DYD+ Sbjct: 249 LTVDYDY 255 >gi|163759035|ref|ZP_02166121.1| hypothetical protein HPDFL43_04705 [Hoeflea phototrophica DFL-43] gi|162283439|gb|EDQ33724.1| hypothetical protein HPDFL43_04705 [Hoeflea phototrophica DFL-43] Length = 344 Score = 72.3 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 38/337 (11%), Positives = 90/337 (26%), Gaps = 69/337 (20%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRT-------------TSDYTLLRQYAKNLD----ADI 68 + WN+ L EG + + + L + D+ Sbjct: 6 VGFWNLENLFAPEGFPAREPWIAKKNAGDLKGWTQALFDRKIDQLASIIVQMGGGAGPDL 65 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + + E+ + A+ + + + +++ I TA K + +++ Sbjct: 66 LGVCEVENRFALEALSDRLDQLLPGRNYSIVHADSTKDKRGIDTAFIFDKNRLVIIETEI 125 Query: 129 PLLGAKDSFSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLD-SLENTYSPSCSLLSQ 186 + R G R + +G ++ L H S + L Sbjct: 126 F---SHFVMRRTGTRDITQCTFVTNSGNQLIALSNHWPSRSGGTIESAGYRMTAGETLGY 182 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDP 230 + I ++++ + GD N + + + Sbjct: 183 W----HERIREERDKDAAVIAMGDMNDDPYDASLMVHANARRERDDVEGSTSAMFYNLSW 238 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKI---PIDYFVMDQNAYK-----FLIQESFSEILYNE 282 N + + L K D ++ ++ K +++++ Y E Sbjct: 239 NLLRQTVTSKSGRKRTLYGTLYFKGDANLFDQILVSRSLLKGSTPLKVLEDTVRIEAYPE 298 Query: 283 DDIKSRGKRL-------------------SDHCPISI 300 S+ + SDH P+S+ Sbjct: 299 MTSNSKNEGPIRFGMAKGNAARNVNTDGYSDHFPVSV 335 >gi|6320856|ref|NP_010935.1| Isc1p [Saccharomyces cerevisiae S288c] gi|731443|sp|P40015|ISC1_YEAST RecName: Full=Inositol phosphosphingolipids phospholipase C; Short=IPS phospholipase C; Short=IPS-PLC; AltName: Full=Neutral sphingomyelinase; Short=N-SMase; Short=nSMase gi|603611|gb|AAB64552.1| Yer019wp [Saccharomyces cerevisiae] gi|285811643|tpg|DAA07671.1| TPA: Isc1p [Saccharomyces cerevisiae S288c] Length = 477 Score = 72.3 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 40/328 (12%), Positives = 91/328 (27%), Gaps = 62/328 (18%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-----------------QYA 61 S A ++ +++N L + K+ +R + L Sbjct: 34 SKAYSIKFLTFNTWGL-----KYVSKHRKERLRAIADKLAGHSMLTPISDELLPNGGDSN 88 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 +N D D++ LQE+ + S AI + Sbjct: 89 ENEDYDVIALQEIWCVEDWKYLAS-----ACASKYPYQRLFHSGILTGPGLAILSKVPIE 143 Query: 122 RVLQQSYPL---LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 +P+ A + ++ + I +++ H+ + + Sbjct: 144 STFLYRFPINGRPSAVFRGDWYVGKSIAITVLNTGTRPIAIMNSHMHAPYAKQG----DA 199 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF--------WKTIDP 230 S QA I +++ ++ GD N + L + W+ + Sbjct: 200 AYLCHRSCQAWDFSRLIKLYRQAGYAVIVVGDLNSRPGSLPHKFLTQEAGLVDSWEQLHG 259 Query: 231 NDSLIRFPKEKD--------SRCNA--NKNLRNKI-----PIDYFVMDQNAYKFLIQESF 275 L + + C++ N + +DY ++D + + + Sbjct: 260 KQDLAVIARLSPLQQLLKGCTTCDSLLNTWRAQRQPDEACRLDYALIDPDFLQTVDAG-- 317 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + I +SDH S + Sbjct: 318 ---VRFTERIPHLDCSVSDHFAYSCTLN 342 >gi|294628891|ref|ZP_06707451.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. e14] gi|292832224|gb|EFF90573.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. e14] Length = 248 Score = 72.3 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 41/293 (13%), Positives = 76/293 (25%), Gaps = 55/293 (18%) Query: 13 LVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 L+P + + VR++ +NI +L D+ L + + D+V Sbjct: 2 LLPNSRTEPDGSAVVRVLGYNIRSL----------------QDDFEALARVIRACAPDLV 45 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 LQE + K + S L+ + + ++R R P Sbjct: 46 LLQEAPRFFRWRKKLAR-----LASATDLVILTGGATAAGPAVLCSLRATVERTEDVLLP 100 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 L + R +V ++ VL HL + Q+ Sbjct: 101 LTPGQHR------RGLATAVVRFGDARLGVLACHLSLV-------------AAERQDQSG 141 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L D + + ++ GD N D + + Sbjct: 142 LLLDRLAEMGVEHA--IVGGDINEGPEGPAFRRLADALQDGYATAPW------GGEHTWS 193 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID + E D+ + +DH P+ Sbjct: 194 ATEPHRRIDAIFATPGIEVLGCGVPLDQPGVTEADL----RAATDHRPVLAAL 242 >gi|255066357|ref|ZP_05318212.1| endonuclease/exonuclease/phosphatase family protein [Neisseria sicca ATCC 29256] gi|255049237|gb|EET44701.1| endonuclease/exonuclease/phosphatase family protein [Neisseria sicca ATCC 29256] Length = 241 Score = 72.3 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 33/256 (12%), Positives = 79/256 (30%), Gaps = 38/256 (14%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNA-----VAKVFPKNTWCIFYST-ERLINHSKR 104 + + + + +D++FLQE+ + + K + I ++ K Sbjct: 11 KVQVDSMAEELRGIGSDVLFLQEVQGQHLTRSSRLPDFPEKPHYDILGDRLSYNRSYGKN 70 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164 H A+ + + + + S ++ R + V G + ++ + Sbjct: 71 AVYPQRHHGNAILSRLPLETRHNLNI-----SVNKLEQRGVLHCEVLPEGWETPLVCLCA 125 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 ++Q + + +++ + P ++AGDFN + Sbjct: 126 HLNLREPD-----------RAKQYRAIFEYVVHHIDPQSPLILAGDFNDWRQKSALS--L 172 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 ++ N+ F R + +D + + Sbjct: 173 GNALNLNE---VFVDSNGKRPKTFPARLPVLSLDRVYTRN----------LEVLDSQIHN 219 Query: 285 IKSRGKRLSDHCPISI 300 K +RLSDH P+S+ Sbjct: 220 GK-NWQRLSDHLPLSV 234 >gi|126664651|ref|ZP_01735635.1| Metal-dependent hydrolase [Marinobacter sp. ELB17] gi|126630977|gb|EBA01591.1| Metal-dependent hydrolase [Marinobacter sp. ELB17] Length = 289 Score = 72.3 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 30/293 (10%), Positives = 78/293 (26%), Gaps = 56/293 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFL 71 + +RL+++NI + + + + N D++ L Sbjct: 33 AEGGHLRLLTFNIQVGISTSSYRHYLTRSWQHVLPHRSRFENLDRIATLLSNY--DVIAL 90 Query: 72 QEMGSYNAVAKVFPKNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE + + + + + R+ + + + + + + L Sbjct: 91 QECDGGSLRSGHINQVQYLAEAAGIPYWYQQLNRNLGQFAQHSNGLLSRFRPLEVKEHRL 150 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G R + + ++ +HL Q + Sbjct: 151 PGL------IPGRGVIVAKYGNPEDPLLLVMMHLSLSKSA----------------QQRQ 188 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 L +++ V+ GD N + D + + ++ + Sbjct: 189 L-GFVSDLISDYRHVVLMGDMNA----HAEQLLTNTPLKQTDLIPL-----PANAHSFPS 238 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 R + +D+ ++ + +SDH PI++D Sbjct: 239 WRPEKALDHILVSPSL--------------QVHSSGVVSYPVSDHLPIALDIT 277 >gi|17554634|ref|NP_499388.1| hypothetical protein R17.2 [Caenorhabditis elegans] gi|3879187|emb|CAB07271.1| C. elegans protein R17.2, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 628 Score = 72.3 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 81/322 (25%), Gaps = 43/322 (13%) Query: 23 KVRLVSWNI------------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 +R++S+NI L + + RT L + + ++F Sbjct: 306 TIRIMSYNILADLYLNLTLPQEQLFFNYCQKSSQRIIYRTPIFLKQLHDFIHSARCSLIF 365 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLI----NHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 LQE+ + P + S + + + K Sbjct: 366 LQEVDLSRHENFIVPFLNTISYSSEIAKKVGTVSEGVAIIFDSQRFQVISSKCYGVAELA 425 Query: 127 SYPLLGAKDSFSRAGNRR-----AVELLVEINGKKIWVLDIHLKSFCFLD-SLENTYSPS 180 S +LG ++ + R ++++V + + +L + Sbjct: 426 SGDILGILETSEESKERFSTRPTVLQIVVLKDSRTGKLLVCGNTHLHHNPIDEHVKVLQA 485 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL----------GNNDDFW----- 225 + + + ++ K V + GDFN N D W Sbjct: 486 LTCTRKLLEIYEETRELNKGIEVLVLFGGDFNSTPNGAVFNLMSMGNLPKEDAVWNCDSK 545 Query: 226 ---KTIDPNDSLIRFPKEKDSRCNANKN--LRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 + I + + + + +DY E + Sbjct: 546 ITPQDIKIDKKMDCLTGTPEYTNYTASSQKDGFVGCLDYIWGVGATSIRHCPLPSHEKVI 605 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 SDH PI D Sbjct: 606 K-YTALPSPISPSDHLPIICDI 626 >gi|257126278|ref|YP_003164392.1| endonuclease/exonuclease/phosphatase [Leptotrichia buccalis C-1013-b] gi|257050217|gb|ACV39401.1| Endonuclease/exonuclease/phosphatase [Leptotrichia buccalis C-1013-b] Length = 263 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 34/299 (11%), Positives = 83/299 (27%), Gaps = 54/299 (18%) Query: 24 VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNA 79 +++++ N++ L E +L + D++ +QE+ + Sbjct: 1 MKILTVNVHAWLEEN------------QMEKIDILARTIAEKQYDVIAMQEVNQLMNNKI 48 Query: 80 VAKVFPKNTWCIFY---------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 + + + + L + + +AV ++ + + Sbjct: 49 IFDDIREENYAWVLLETLQKYTDTDYYLHWSNSHIGFGKYNEGVAVITRHKIKAEDEF-Y 107 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 S RR V + + G+ I H+ Sbjct: 108 CTFAQSVRTISARRIVSITINYEGQDIEFYSCHMNLPNCETEDMGKN------------- 154 Query: 191 LKDWITQKKESLVPFVIAGDFNRK--INYLGNNDDFWKTIDPNDSLIRFPKEK---DSRC 245 I + ++ ++ GDFN N + + + + + D Sbjct: 155 -IQTILNRTQNSNLKILMGDFNTDAIGNVAAYENILSQGLFDTYVMAEKKDDGITVDKSI 213 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + N + K +DY ++ + F+ +SDH I + +F Sbjct: 214 HGWDNDKAKKRLDYIFSNKELKVKESKVIFNNKNKEI---------VSDHFGIEVKIEF 263 >gi|45657327|ref|YP_001413.1| exodeoxyribonuclease [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|294828126|ref|NP_712697.2| exodeoxyribonuclease [Leptospira interrogans serovar Lai str. 56601] gi|45600565|gb|AAS70050.1| exodeoxyribonuclease [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|293385973|gb|AAN49715.2| exodeoxyribonuclease [Leptospira interrogans serovar Lai str. 56601] Length = 254 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 71/269 (26%), Gaps = 58/269 (21%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L Y +N D + QE A P + W T + ++ +AV Sbjct: 19 LADYIRNTKPDFICFQE---TKANQDQVPPSLWEEGGYT-----PVFHSAEKKGYSGVAV 70 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 K +G D F R + + + +++ S D + Sbjct: 71 LYKKPP----EKITIGIGDPFFDKEGRS-----IYLEYPNFALWNLYFPSGTTGDIRQAA 121 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------YLGN 220 + + +++++ ++ GD N Sbjct: 122 K-------MKFLDLFQKESSKRRKKQPNIIVCGDVNIAHTPQDIHDPKGNAKSSGFLPEE 174 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-------NKIPIDYFVMDQNAYKFLIQE 273 + + ++ D + + R IDYF + + K + Sbjct: 175 REWLSEFLNKGWVDTFRYLYPDKQEYSWWTFRAGARAKNKGWRIDYFFVTEELKKNVKSH 234 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302 S R K SDH P+ + Sbjct: 235 SI-----------FRDKPFSDHAPLEFEI 252 >gi|307564579|ref|ZP_07627119.1| endonuclease/exonuclease/phosphatase family protein [Prevotella amnii CRIS 21A-A] gi|307346737|gb|EFN92034.1| endonuclease/exonuclease/phosphatase family protein [Prevotella amnii CRIS 21A-A] Length = 349 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 35/324 (10%), Positives = 81/324 (25%), Gaps = 60/324 (18%) Query: 26 LVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLDADI------ 68 + +N L + + + + + + + + D+ Sbjct: 29 VGFYNQENLFDYTHDKGKNDYDFTPNGSYHWNKMKYSHKLANMSRVLSEMGTDVLPKVGC 88 Query: 69 --VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 + L E + + V + + H + I A + K V Sbjct: 89 AFIGLAECENDHVVKDLVAQP---ALAQRGYKYIHIEGPDRRGIDCAFIYQPKLFTVRNT 145 Query: 127 S-YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 P + S R + + + + + V+ HL S + Sbjct: 146 KLIPYIYELAKDSAHATRGFLTISGTMANEHVSVIVCHLPSRGASSYYRELGAK------ 199 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID------PNDSLIRFPK 239 Q + +KD + Q ++ ++ GD N + + + + Sbjct: 200 -QIKVIKDSLLQ-EDPNCKVIVMGDMNDDPTNASMHKYLSAKAEISEVGTNDMYNPWYNI 257 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK--------- 290 + D ++ N + F+ + Y ++ I R Sbjct: 258 LVKQGTGTLQYQGRWNLFDQIILSPNFLNKNGSKDFTTLKYWKNQIFKRDYLFQQEGKYK 317 Query: 291 --------------RLSDHCPISI 300 SDH P + Sbjct: 318 GNTKRTTAGGVWLDGYSDHLPTVV 341 >gi|291234353|ref|XP_002737115.1| PREDICTED: deoxyribonuclease I-like [Saccoglossus kowalevskii] Length = 279 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 84/310 (27%), Gaps = 38/310 (12%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M A++ C + V + +WNI + S ++ Sbjct: 1 MKIHIAFAILVLGAACVQAS---VYISAWNIQVFGK---------SKMSDPEVVQVIVDV 48 Query: 61 AKNLDADIVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + DI +QE+ + AV + + + + +++ A R Sbjct: 49 IERY--DICAVQEVRDIDEIAVYDLLDELNAQNNGAFSLELGPRVGRTSSKEQYAFYYRH 106 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 V V++ DS R + + + D++ Sbjct: 107 DVVSVVRSYTYD----DSKHDYFEREPHMVDFSTSHSALTRFVFGAIHVKPDDAVAEIDY 162 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 L + + V +I GD+N +Y+ +D + + Sbjct: 163 L----------TLVNDDAVDVYNNVNVLIGGDYNADCDYVREDDWQYISYRTQSRFSWLI 212 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI-----KSRGKRLS 293 + A+ + + + S Y+ D + +S Sbjct: 213 GDDADTNLASSSCAYDRLVTH---GAGFTDAFRPGSAKVFYYDIDLYGTPMDPTLALDVS 269 Query: 294 DHCPISIDYD 303 DH P+ + D Sbjct: 270 DHYPVEMIID 279 >gi|301067802|ref|YP_003789825.1| metal-dependent hydrolase [Lactobacillus casei str. Zhang] gi|300440209|gb|ADK19975.1| Metal-dependent hydrolase [Lactobacillus casei str. Zhang] Length = 355 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 44/324 (13%), Positives = 89/324 (27%), Gaps = 65/324 (20%) Query: 21 AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 Q +++NI G S K + + + + + D+ F Q Sbjct: 52 GQTYTAMTYNIGYGSYPPSYSFFMDGGKYSRAYSKKSVRTSINGVIKTTQAQNPDVAFYQ 111 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTER-----------LINHSKRDSNNDIHTAIAVRKKNV 121 E+ ++ + + + + + I K Sbjct: 112 EIDPDGDRSQHVNEVKMVTGAQQQYANIYGQNYDSAYLFYPFTQPIGKTKSGILTLSKAK 171 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP 179 + Y L D RA NGK+ +++IH+ +F Sbjct: 172 VDSSRRYSLPVDTDFNKIIDLDRAFTATKTTVANGKQFVMVNIHMSAFTPN--------- 222 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + Q L +I Q + ++AGD+N ++ K +D + + Sbjct: 223 -VKIQQAQFTKLFKYIEQAYQQGNYVMVAGDYNHRLLKNTAEIFHTKDLDETWTHLFPKS 281 Query: 240 EKDSRCN--------------------ANKNLRNKIPID-YFVMDQNAYKFLIQESFSEI 278 + + + ID Y + N + ES + Sbjct: 282 KLPAGFHIPTMGLAKAAVPSVRALDQPYQPGKSFVTLIDGYIL-SPN----IKAESVHVV 336 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 G + SDH P+ + + Sbjct: 337 ST--------GFQYSDHNPVVLKF 352 >gi|301052087|ref|YP_003790298.1| putative endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis CI] gi|300374256|gb|ADK03160.1| possible endonuclease/exonuclease/phosphatase family protein [Bacillus cereus biovar anthracis str. CI] Length = 263 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 75/269 (27%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 18 EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ V + ++ + KD+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNVVKEDAFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKDQVNRLVERVD----SNELSFLMGDFNNNARLQG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +++ + Sbjct: 183 EGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKIRSSKVV 242 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ +SDH + + D Sbjct: 243 FNGTNRKV---------ISDHFGVEVQVD 262 >gi|323305214|gb|EGA58961.1| Isc1p [Saccharomyces cerevisiae FostersB] Length = 471 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 40/328 (12%), Positives = 91/328 (27%), Gaps = 62/328 (18%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-----------------QYA 61 S A ++ +++N L + K+ +R + L Sbjct: 28 SKAYSIKFLTFNTWGL-----KYVSKHRKERLRAIADKLAGHSTLTPISDELLPNGGDSN 82 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 +N D D++ LQE+ + S AI + Sbjct: 83 ENEDYDVIALQEIWCVEDWKYLAS-----ACASKYPYQRLFHSGILTGPGLAILSKVPIE 137 Query: 122 RVLQQSYPL---LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 +P+ A + ++ + I +++ H+ + + Sbjct: 138 STFLYRFPINGRPSAVFRGDWYVGKSIAITVLNTGTRPIAIMNSHMHAPYAKQG----DA 193 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF--------WKTIDP 230 S QA I +++ ++ GD N + L + W+ + Sbjct: 194 AYLCHRSCQAWDFSRLIKLYRQAGYAVIVVGDLNSRPGSLPHKFLTQEAGLVDSWEQLHG 253 Query: 231 NDSLIRFPKEKD--------SRCNA--NKNLRNKI-----PIDYFVMDQNAYKFLIQESF 275 L + + C++ N + +DY ++D + + + Sbjct: 254 KQDLAVIARLSPLQQLLKGCTTCDSLLNTWRAQRQPDEACRLDYALIDPDFLQTVDAG-- 311 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + I +SDH S + Sbjct: 312 ---VRFTERIPHLDCSVSDHFAYSCTLN 336 >gi|149279400|ref|ZP_01885531.1| hypothetical protein PBAL39_13817 [Pedobacter sp. BAL39] gi|149229926|gb|EDM35314.1| hypothetical protein PBAL39_13817 [Pedobacter sp. BAL39] Length = 275 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 88/305 (28%), Gaps = 41/305 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 IRK L FF + A AQ + + SWN+ +TT+ + + Sbjct: 7 IRKATLFATFFFIHIVAF-AQTISICSWNVKDFG-----------QSKTTAQLQFIARTI 54 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 K D DIV +QE+ + K + + + + ++ D ++ Sbjct: 55 K--DFDIVAIQEVVAGVGGPKAVIRLHEELNKTGQEWQYSISHGTSGDRYSKERYVFFWK 112 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 Q + ++ NR + K + H E +Y Sbjct: 113 SKKLQMIGPAWLEKKYNLEINREPYLARFNMGKKTFMIGSFHAIPKSKQPETEISYLKFL 172 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP---NDSLIRFP 238 L Q ++ GDFN ++ N +P N Sbjct: 173 PALYPQ---------------DQLILCGDFNLSQSHSVFNPLKKMGYEPSMINQKTSLRQ 217 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 K + C A++ D F + + + +SDH P+ Sbjct: 218 KCINGDCLASEY-------DNFFY-PGKGINCKSSGI-IPFFQQFSDFKDARLVSDHVPV 268 Query: 299 SIDYD 303 + + Sbjct: 269 FLKFS 273 >gi|49116840|gb|AAH73585.1| LOC443670 protein [Xenopus laevis] Length = 559 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 84/331 (25%), Gaps = 55/331 (16%) Query: 19 SVAQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 + A R VS+NI LS + LLR+ AD++ L Sbjct: 238 AGAGTFRTVSYNILADVYARTELSRDVLYPYCPARALGAQYRHNLLRRELSGYRADVLCL 297 Query: 72 QEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-------- 120 QE A+ V + Y ++ + + + + Sbjct: 298 QEAERDVFEGALGPVLEELGMEGRYLEKQRQHEGLATFYSRDRFRLLGQHDISLSEGLLS 357 Query: 121 -VRVLQQSYPLLGAKDSFSRAGNRRAVELL-----VEINGKKIWVLDIHLKSFCFLDSLE 174 R+ L +++ + R +V + +E ++I V + HL + Sbjct: 358 DPRLSDLRERLSLYREAREKLLKRSSVLQVLVLESIEDPSRRICVANTHLYFHPKGGN-- 415 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKES---LVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 + Q + +P V GDFN + + + + Sbjct: 416 --------IRLLQVAVALAHLGHVANELYGGIPVVFCGDFNSLPDTGLHRFIKGGAVGED 467 Query: 232 DSLIR-----------------FPKEKDSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQE 273 D N +DY + I Sbjct: 468 DEDWTSNGEEEQCNMALTHPFKLTSACGEPAYTNYIGEFHGCLDYIFIDSARLAVERIIP 527 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + SDH + D + Sbjct: 528 LPTHQEVTKYRALPSIEHPSDHMALVCDLKW 558 >gi|33604227|gb|AAH56304.1| Deoxyribonuclease I-like 3 [Danio rerio] Length = 315 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 91/310 (29%), Gaps = 40/310 (12%) Query: 2 IRKYVLALVFF--LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 IR+ +L++ L+ C R+ ++N+ + +S + + Sbjct: 3 IRRILLSIFLLSGLLTC-----YGFRICAFNVQSFG---------DSKSADAKIMNSISR 48 Query: 60 YAKNLDADIVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 DI LQE+ A+ ++ + + + + + Sbjct: 49 IVARC--DICLLQEVRDQKNKAIPRLLEAVNKIGDNDFQYVASERLGRTQTYQEQYVFFY 106 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLE 174 +K+ +L+ Y + A +R + + K+ ++ H ++ Sbjct: 107 RKSTAILKGQYQYPDTQTGDVDAFSREPFVVYFQAPKTLAKEFVLIPQHTTPSNATKEID 166 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 Y + + + GDFN Y+ + + + S Sbjct: 167 ELYDVFVDVKGRW-------------ETENVMFLGDFNAACGYVAKKNRKNIRLYTDPSF 213 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-- 292 ++ I V + + + S + ++ + + + L Sbjct: 214 TWLIQDNVDTTVKESTDCAYDRI--VVHGEPFLRSIEPFSAQPFNFPKEFLLTEAQALEV 271 Query: 293 SDHCPISIDY 302 SDH PI + Sbjct: 272 SDHYPIEVVL 281 >gi|288560371|ref|YP_003423857.1| exodeoxyribonuclease III Xth1 [Methanobrevibacter ruminantium M1] gi|288543081|gb|ADC46965.1| exodeoxyribonuclease III Xth1 [Methanobrevibacter ruminantium M1] Length = 246 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 38/297 (12%), Positives = 79/297 (26%), Gaps = 72/297 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81 ++++SWN+N RT + + DI+ QE + Sbjct: 4 LKIISWNVNG--------------IRTRIKNKDINPVLEKE-PDIILFQETKASYEQMDK 48 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K KN + ++ S +I I R A Sbjct: 49 KFLNKNPYDYYFLKGESARTGGLASFTNIVPKIIKRFFIKS---------------QDAF 93 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R V ++ + ++ I+ + + N + L + + K Sbjct: 94 HRACV-----LDFEDFTLIHIYAPAGTGKKANFNQKLDYFNSLLKYVE---------KNK 139 Query: 202 LVPFVIAGDFNRKINY------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 +IAGDFN N ++ + + + Sbjct: 140 DKNLIIAGDFNIAHNDIDISNKDTKVSFTDEERSVLDKLESFGFVDALRLFNEEESFSYW 199 Query: 250 NL---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +DYF + ++ + S + H PI ++ + Sbjct: 200 KNKEENDGARLDYFFVSESLKDKVKSSSILVDVEGSK-----------HLPIELEIE 245 >gi|227489312|ref|ZP_03919628.1| possible exodeoxyribonuclease III, exonuclease III [Corynebacterium glucuronolyticum ATCC 51867] gi|227090685|gb|EEI25997.1| possible exodeoxyribonuclease III, exonuclease III [Corynebacterium glucuronolyticum ATCC 51867] Length = 233 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 35/294 (11%), Positives = 79/294 (26%), Gaps = 75/294 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + + + + D D++ LQE Sbjct: 1 MRIATWNVN----------------SARARFGRITELLARHDIDVLALQETKIKEF---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +A+ + Q+ G D + R Sbjct: 41 ------------PPVKGYEVAHVGYNQWNGVAILSRVGLKDVQT-SFTGQPDYEGKKEGR 87 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + GK + I++ + +D Y ++L ++ Sbjct: 88 AISAV---CGGK--RIWSIYVPNGRAVDHPHYDYK---------LRFLYNFARYAAPGAD 133 Query: 204 PFVIAGDFNRKI-------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + GDFN + ++ + ++ A + Sbjct: 134 --LAMGDFNVIPGPEDVYDESPFETHVTEPERAAFEYLTDVLPVVSPTGYTYWDYQARRF 191 Query: 251 -LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ID+ + A + D R + SDH P+ +Y+ Sbjct: 192 DRDQGMRIDFHLSTTPATSGFV------------DRAERAAKSSDHAPVICEYE 233 >gi|146278429|ref|YP_001168588.1| endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides ATCC 17025] gi|145556670|gb|ABP71283.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides ATCC 17025] Length = 240 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 37/282 (13%), Positives = 74/282 (26%), Gaps = 54/282 (19%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++ + S+NI+ K D LDAD+V LQE Sbjct: 3 APEITVASYNIH-----------KGIGTDRRRDLRRTSAVIAELDADLVALQEADRRFGD 51 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + + H + + ++ L G Sbjct: 52 RAGLLDLEHLRAETGLVPVQVEGSGRAHGWHGNLLLVREAEVEEVHKIVLPG-------F 104 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R A+ + + ++G+ + V+ HL + Q + L + I Sbjct: 105 EPRGALMIDLLMHGRPLRVIAAHLGLLPGS-------------RAAQTRHLLERIEAGAP 151 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 P ++ GD N + + + + + +D Sbjct: 152 --RPTLLMGDLNEWRGSGAAMSHLARHFTGAVMV-----------RSFPSRFPILALDRL 198 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ++ + +R SDH PI Sbjct: 199 MTCKHGRLQDV----------VPHDTPLARRASDHLPIKARL 230 >gi|58580132|ref|YP_199148.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae KACC10331] gi|58424726|gb|AAW73763.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae KACC10331] Length = 285 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 43/322 (13%), Positives = 86/322 (26%), Gaps = 83/322 (25%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + +R++S+N N L + + DAD++ +QE Sbjct: 11 PFPNPGSSSMRIISFNANGLRSAASKGFF---------------AWFAAQDADVLCVQET 55 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + ++ + + + S ++ +A+ ++ ++ Sbjct: 56 KAQE--HQLAGPD-----FLPTGYKAWFRDASTKKGYSGVAIYSRHEPDEVRTALGWPEF 108 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D R +E V+ ++ S + + Q QWL+ Sbjct: 109 DEEGRY---------IEARFGNRSVVSFYIPSGSSGELRQGYK-------FQVMQWLRPI 152 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN-----------------DSLIRF 237 + + S +V+ GD+N L + + D Sbjct: 153 LDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPERDWLNGLCADVPDDANAA 212 Query: 238 PKEKDSRCNA--------NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILY 280 N+ IDY ++ L S Sbjct: 213 EGRGWVDSYRVLHPQGQDYTWWSNRGAARTNNVGWRIDYQLVTPGLRDTLRACSI----- 267 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 R +R SDH P +DY Sbjct: 268 ------YREERFSDHAPYIVDY 283 >gi|15672773|ref|NP_266947.1| exodeoxyribonuclease A [Lactococcus lactis subsp. lactis Il1403] gi|12723711|gb|AAK04889.1|AE006312_9 exodeoxyribonuclease A [Lactococcus lactis subsp. lactis Il1403] gi|326406342|gb|ADZ63413.1| exodeoxyribonuclease III [Lactococcus lactis subsp. lactis CV56] Length = 334 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 33/311 (10%), Positives = 84/311 (27%), Gaps = 62/311 (19%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 + +SWNI++L+ + +R + + D++ +QE + K Sbjct: 53 KFISWNIDSLNA-----ALTGTSERAALSL-AVVKNLAQAQPDVLAIQETKLPSTGPKKA 106 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + +++ S + ++ + K A R Sbjct: 107 HLEVLEELFKGYKIVWRSSVEPARKGYSGTMILYKETLPEPVITFPEIDAPEPMDAEGRI 166 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + + +V ++ + + + L ++ P Sbjct: 167 -----ITLEFPDFFVTTVYTPNAQEGLTRLDLRGIWDDNYRNYLTSL--------DAQKP 213 Query: 205 FVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIR------FPKEKD 242 GDFN + + F + ++ + K + Sbjct: 214 VFACGDFNAAYTEIDLANPRGNHNSAGFTDQEREKFGQLLEAGFTDTFRQLHGQVEKFYE 273 Query: 243 SRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + IDY+++ + + + G+RL Sbjct: 274 EGRSIYTWFAQRAKTSKLNNSGWRIDYWLVSNRLAQAV----------KVSEPLDSGERL 323 Query: 293 SDHCPISIDYD 303 DH PI ++++ Sbjct: 324 -DHVPILLEFE 333 >gi|322710982|gb|EFZ02556.1| endonuclease/exonuclease/phosphatase family protein [Metarhizium anisopliae ARSEF 23] Length = 641 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 37/332 (11%), Positives = 84/332 (25%), Gaps = 64/332 (19%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIVFLQEMGS 76 ++ + + +N L+ +++ Q L D++FLQE+ Sbjct: 326 SANCNGLTVADYNAENLAPNSAHLP------------SVVSQIVTKLRTPDLIFLQEVQD 373 Query: 77 YNA-VAKVFPKNT----------------WCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 + V F + +I A R Sbjct: 374 NSGPVDDGVTSANLTLSTLTQGIEKTSGVRYDFVEVAPVDGQDGGQPGGNIRCAYLYRPD 433 Query: 120 NVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELL---VEINGKKIW 158 V + + P + + R+ + + V+ K + Sbjct: 434 AVELYKPNPGGSNDENAVVDGPSIKYNPGRIGQSDANFEATRKPLVAMWKPVKGPNKVFF 493 Query: 159 VLDIHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFN 212 +++H S L + Q + ++I Q ++ + AGDFN Sbjct: 494 TINVHFSSKGGSTGLHGDPRPPVNKGVEKRTGQMELTANFIAQILAQDPKARIITAGDFN 553 Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 + + +N +D+ + + Sbjct: 554 EFTQVQPV--TTFTSKSGLLDADEVAGLAAVERYTYLFDQNSEALDHMYISRGL-----A 606 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + ++ + SDH P +F Sbjct: 607 NHAQVEHLHLNTWQNYDGQTSDHDPSVAKLNF 638 >gi|151944728|gb|EDN62987.1| Inositol phosphosphingolipid phospholipase C [Saccharomyces cerevisiae YJM789] Length = 471 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 40/328 (12%), Positives = 91/328 (27%), Gaps = 62/328 (18%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-----------------QYA 61 S A ++ +++N L + K+ +R + L Sbjct: 28 SKAYSIKFLTFNTWGL-----KYVSKHRKERLRAIADKLAGHSTLTPISDELLPNGGDSN 82 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 +N D D++ LQE+ + S AI + Sbjct: 83 ENEDYDVIALQEIWCVEDWKYLAS-----ACASKYPYQRLFHSGILTGPGLAILSKVPIE 137 Query: 122 RVLQQSYPL---LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 +P+ A + ++ + I +++ H+ + + Sbjct: 138 STFLYRFPINGRPSAVFRGDWYVGKSIAITVLNTGTRPIAIMNSHMHAPYAKQG----DA 193 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF--------WKTIDP 230 S QA I +++ ++ GD N + L + W+ + Sbjct: 194 AYLCHRSCQAWDFSRLIKLYRQAGYAVIVVGDLNSRPGSLPHKFLTQEAGLVDSWEQLHG 253 Query: 231 NDSLIRFPKEKD--------SRCNA--NKNLRNKI-----PIDYFVMDQNAYKFLIQESF 275 L + + C++ N + +DY ++D + + + Sbjct: 254 KQDLAVIARLSPLQQLLKGCTTCDSLLNTWRAQRQPDEACRLDYALIDPDFLQTVDAG-- 311 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + I +SDH S + Sbjct: 312 ---VRFTERIPHLDCSVSDHFAYSCTLN 336 >gi|332883313|gb|EGK03596.1| hypothetical protein HMPREF9456_01663 [Dysgonomonas mossii DSM 22836] Length = 305 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 39/331 (11%), Positives = 77/331 (23%), Gaps = 66/331 (19%) Query: 4 KYVLALVFFLVPCTASVAQ-----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 K +L ++F + C+ S AQ +++++S+NI Sbjct: 6 KALLIILFIFIVCSHSKAQSVAPIELKVMSFNIWHGGGSS---------------IGATG 50 Query: 59 QYAKNLDADIVFLQEMGSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + ADI+ +QE N + W + + Sbjct: 51 KVFVESQADIIGIQESTHKEKNTAVHLADSLGWHSYVFE-----------------GRTI 93 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 K V + L+ + + I L S + Sbjct: 94 ITKYPIVDTSANNHGVKIKIDKDHFVWMFNVHLMYCPYEPYQLNGIEYCGGPILHSAQEA 153 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID------- 229 + + I + ++ P + GDFN + Sbjct: 154 IASAIKSRGSTVDSNIADIIEVRKEGYPIFLTGDFNEPSYLDWTAKAADAGLCKTAVEWP 213 Query: 230 -----------PNDSLIRFPKEKDSRCNANKNLRNK-------IPIDYFVMDQNAYKFLI 271 + +P E + L ID+ + + Sbjct: 214 STKVFSEKGGMKDSYRTFYPDEVRKPGHTWTTLPETTAYKEVLDRIDFVLFSGEKIELKN 273 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + E D SDH + + Sbjct: 274 SQIVGEESPLSDIRFKN--YPSDHRAVLSTF 302 >gi|326508336|dbj|BAJ99435.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 912 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 26/248 (10%), Positives = 63/248 (25%), Gaps = 9/248 (3%) Query: 17 TASVAQKVRLVSWNI--NTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 A++ +++S+NI + L+ Q+ + + + DI+ Q Sbjct: 184 PPRHAERFKVLSYNILADYLAQEHQDLYRDIPSFIMDWNWRKNRIGLEISCWRPDIICFQ 243 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKKNVRVLQQSYPLL 131 E+ + + + + + + ++ + Sbjct: 244 EVDKFTDLEQEMSTRGYTGIWKMRTGNAVDGCAIFWRTARFQLCYKEDIEFNKLGLRDNV 303 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 R ++ I C + L N L Q + L Sbjct: 304 AQLCVLESVFQRNVQTGSTHLSTSSIHPQQAKQVVICNIHVLYNPKRGDIKL--GQIRTL 361 Query: 192 KDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 D + + P ++ GDFN N + ++ + + + Sbjct: 362 LDRAYATSKRWNDAPVILCGDFNATPKSPLYNYILEQKLNLFGLARNAISGQQTSSHGLY 421 Query: 250 NLRNKIPI 257 N Sbjct: 422 TGSNTSRY 429 Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 23/76 (30%) Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + N + +DY ++ + ++F E + E Sbjct: 835 TDVEDFHGTKDANKEPLVTSYNRKFMGTVDYIWASEDLQTVSVLDTFPEGILKETIGFPT 894 Query: 289 GKRLSDHCPISIDYDF 304 K SDH + + F Sbjct: 895 KKWGSDHIALVCELAF 910 >gi|254491099|ref|ZP_05104280.1| exodeoxyribonuclease III [Methylophaga thiooxidans DMS010] gi|224463612|gb|EEF79880.1| exodeoxyribonuclease III [Methylophaga thiooxydans DMS010] Length = 259 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 90/307 (29%), Gaps = 78/307 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81 +R+++ N+N + + + +AD+V +QE + Sbjct: 1 MRIITVNVNGIRAAARKGFF---------------DWLLKQNADVVCIQETKAQIHQLED 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 VF + FY +S A+ R + V+ G + Sbjct: 46 AVFTPQGYHCFYHDAEKKGYSG--------VALYCRSEPDEVIV------GMDNPEFDVE 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R +E K+ V+ +++ S + + + Q +K S Sbjct: 92 GRY-----IEARFGKLSVISLYMPSGSSKEERQQVKYRCMDFFEIKMQEMKA-------S 139 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKT---------------IDPNDSLIRFPKEKDSRCN 246 +VI GD+N + + + +E + + Sbjct: 140 GRDYVITGDWNIAHKNEDIRNWKGNLKNSGFLPEERAWLDKLFDEMGFVDAFRELPQQEH 199 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY ++ + + R +R SDH P Sbjct: 200 EYTWWSNRGQAWANNVGWRIDYHILSPSMKGTVKATDI-----------YRDERFSDHAP 248 Query: 298 ISIDYDF 304 ++IDYD+ Sbjct: 249 LTIDYDY 255 >gi|195977651|ref|YP_002122895.1| exodeoxyribonuclease ExoA [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974356|gb|ACG61882.1| exodeoxyribonuclease ExoA [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 275 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 80/305 (26%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + R + DADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTGESPRALLSR------AVLDTLVAQDADIIAIQETKLSAKGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + S + + K ++P +GA + G Sbjct: 55 KHLESLLGYFPNHLNVWRSSVEPARKGYAGTMFLYKKELNPIVTFPDIGAPTTMDAEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + +V ++ + + L ++ Sbjct: 114 -----IITLEFDDFFVTQVYTPNAGDGLRRLEERQLWDQKYADYLAQL--------DAQK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + F N Sbjct: 161 PVLATGDYNVAHKEIDLANPASNHRSPGFTDEERLGFTNLLNRGFTDTFRFIHGDIPNVY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + DH PI Sbjct: 221 SWWAQRSKTSKLNNTGWRIDYWLTSNRLIDKVSRSEMISSGERQ-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 LLEID 274 >gi|325293384|ref|YP_004279248.1| endonuclease/exonuclease/phosphatase [Agrobacterium sp. H13-3] gi|325061237|gb|ADY64928.1| endonuclease/exonuclease/phosphatase [Agrobacterium sp. H13-3] Length = 343 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 41/339 (12%), Positives = 86/339 (25%), Gaps = 68/339 (20%) Query: 26 LVSWNINTLSEQEGVSLWKNS-VKRTTSDYT---------------LLRQYAKNLDADIV 69 L WN+ L EG + +R +D L+ + D++ Sbjct: 6 LAFWNVENLFAPEGYPAREPWIAERLKNDLKGWTEDLFKTKLRQLGLIIRQIGGAGPDLL 65 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 + E+ + + + + R+++ I TA K + + + Sbjct: 66 GVCEVENRFVLETLAEHLNDLMPERAYRVVHADSSKDQRGIDTAFIYDSKKLLINETEIF 125 Query: 130 LLGAKDSFSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLD-SLENTYSPSCSLLSQQ 187 + R G R + G+++ L H S + L Sbjct: 126 ---SHFVMRRTGTRDITQCTFITKGGRQLIALSNHWPSRSGGAVESAGFRMTAGETLGYW 182 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 I ++K + + V GDFN + T + +D + Sbjct: 183 ----HQRIREEKGNDIAVVAFGDFNDDPSDASLRYHANSTRERDDVESSQSAMFYNLTWN 238 Query: 248 N-------------------KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS- 287 + D ++ ++ + E + I + Sbjct: 239 YLRQQVVDSVGSARTIYGTLYFNGDANIFDQILVSRSLLNGSSGFAVREETAKIEAIAAM 298 Query: 288 -----------------------RGKRLSDHCPISIDYD 303 SDH P+S+ + Sbjct: 299 VSHSKNEGPIRFGLSKGDAVKNVNLGGFSDHFPVSVIIE 337 >gi|312870577|ref|ZP_07730692.1| exodeoxyribonuclease III [Lactobacillus oris PB013-T2-3] gi|311093892|gb|EFQ52221.1| exodeoxyribonuclease III [Lactobacillus oris PB013-T2-3] Length = 275 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 78/305 (25%), Gaps = 56/305 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWNI++++ + + R + + L+ D V +QE Sbjct: 1 MKFISWNIDSINAALTGTSTRAGETR------AVLKKISALEPDAVAIQETKLSKNGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ S + + ++ +YP +GA + G Sbjct: 55 KHLQVLADLFPGYQIAWRSSVEPARKGYAGTMYLYRDQYQPTVTYPQIGAPEPMDSEGR- 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++ +++ + L + Sbjct: 114 -----IITLEFHDFFLTEVYTPNSGNGLKRLADREQWDDCYRDYLHQL--------DEQK 160 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + +GDFN + + F A Sbjct: 161 PVIASGDFNVAHEEIDLAHPANNHHSAGFTDEERSHFGQLLAAGFTDSFRFLHPEEAGAY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY+++ + S + DH PI Sbjct: 221 SWWAQRVLTSKQNNSGWRIDYWLVSNRLADRVSSSSMIDSGERR-----------DHTPI 269 Query: 299 SIDYD 303 ++ D Sbjct: 270 MLEID 274 >gi|119470261|ref|ZP_01613020.1| putative orphan protein [Alteromonadales bacterium TW-7] gi|119446433|gb|EAW27708.1| putative orphan protein [Alteromonadales bacterium TW-7] Length = 387 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 42/375 (11%), Positives = 91/375 (24%), Gaps = 80/375 (21%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQY 60 L + A + +R+ ++N++ + T + + Sbjct: 10 LLTAASLSLNAYASDTIRVATFNVSMDATNYTAKGEPIKSDALVKALTSNTQQIKNIAEI 69 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN------------ 108 + + DI+ L E + T + S + S Sbjct: 70 IQRVRPDIILLNEFDFVPKEQGIDYFKTHYLAVSQNKQKAVDYPYSYIAPVNTGLATEFD 129 Query: 109 --------------------DIHTAIAVRKKNVRVLQ--QSYPLLGAKDSFSRAGNRRAV 146 + H +A+ K ++ KD + + Sbjct: 130 LDNDGKKSKVMGDAQGFGFFEGHYGMAILSKYPIDFDKIRTLQTFKYKDMPNAKMPLMPI 189 Query: 147 ----------------------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 ++ V I+ K + VL H F + + + Sbjct: 190 TGENWYNAKEWQALRLSSKSFWDVPVVIDNKAVHVLAPHPTPPVFDGEEDRNGKRNHDEI 249 Query: 185 SQQAQWLKDWITQKKESLV--------PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 A ++ + ++ FVI GD N + + N + Sbjct: 250 RLIADYVANADYLYDDNGTKGGLEAQSRFVILGDLNAAPEGDKARLETTDQLLKNPLVNA 309 Query: 237 FPKEKDSRCN--------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 K + + + +DY + F + NE + Sbjct: 310 QFVPKSAGAKQQYELAYAQHFTANWQARVDYVLPSTYGLDIKEGGVFWPVESNEQYRLIK 369 Query: 289 GKRL-SDHCPISIDY 302 + SDH + +D Sbjct: 370 DRSASSDHRLVWLDL 384 >gi|116333326|ref|YP_794853.1| exonuclease III [Lactobacillus brevis ATCC 367] gi|116098673|gb|ABJ63822.1| Exonuclease III [Lactobacillus brevis ATCC 367] Length = 254 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 68/304 (22%), Gaps = 78/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L + + L+AD +QE A Sbjct: 1 MKFISWNVNGLRAIVKKGF---------------VETFQELNADFFGIQETK-LQAGQIE 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S + PL + + Sbjct: 45 LDLPGYYQYWNYAERKGYSGTALFT-----------------KHQPLNVIYGIDAPEFDH 87 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +E +VL + + + Q L ++ Sbjct: 88 EGRAITLEYPD--FYVLTCYTPNSGSGLKRLDFRLGWEHAFLTFIQKL--------DAQK 137 Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD N + F Sbjct: 138 PVIFCGDLNVAHTEIDLKNPKTNHHNAGFTDEERAKMTALLAAGYTDTFRYFNPDVTERY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF+ Q L + + SDHCP+ Sbjct: 198 SWWSYRFHARDNNAGWRIDYFITSQRLQNHLQDAKILDQI-----------MGSDHCPVE 246 Query: 300 IDYD 303 +D Sbjct: 247 LDVT 250 >gi|116511599|ref|YP_808815.1| exonuclease III [Lactococcus lactis subsp. cremoris SK11] gi|116107253|gb|ABJ72393.1| Exonuclease III [Lactococcus lactis subsp. cremoris SK11] Length = 285 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 33/311 (10%), Positives = 80/311 (25%), Gaps = 62/311 (19%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 + +SWNI++L+ + +R + + D++ +QE + K Sbjct: 4 KFISWNIDSLNA-----ALTGTSERAALSL-AVVKNLAQAQPDVLAIQETKLPSTGPKKA 57 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + +++ S + ++ + K A R Sbjct: 58 HLEVLEDLFKGYKIVWRSSVEPARKGYSGTMILYKETLPEPVITFPEIDAPEPMDAEGRI 117 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + + +V ++ + + + L ++ P Sbjct: 118 -----ITLEFPDFFVTTVYTPNAQEGLTRLDLRGIWDDNYRNYLTSL--------DAQKP 164 Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDS------ 243 + GDFN + + + F K Sbjct: 165 VFVCGDFNAAYTEIDLANPRGNHNSAGFTDQEREKFGQLLEAGFTDTFRKLHGPVEKFYE 224 Query: 244 -RCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + IDY+++ + + G+RL Sbjct: 225 EGRSIYTWFAQRAKTSKLNNSGWRIDYWLVSNRLADAI----------KVSEPLDSGERL 274 Query: 293 SDHCPISIDYD 303 DH PI ++++ Sbjct: 275 -DHVPILLEFE 284 >gi|32450017|gb|AAH54141.1| Drng-A-prov protein [Xenopus laevis] Length = 265 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 37/299 (12%), Positives = 87/299 (29%), Gaps = 59/299 (19%) Query: 9 LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DA 66 L+ C + +R+ S+N+ + E + D + + + Sbjct: 4 LLLLCALCV-PHSLGLRICSFNVQSFGE-------------SKRDKPAVMNVVRKIISRC 49 Query: 67 DIVFLQEM-GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 DI L E+ S N V ++ + +KN+ ++ Sbjct: 50 DITLLMEIKDSSNTVIRLLMAQ----------------------------LNRKNLVSVK 81 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 +Y + A +R + + G ++ I + ++ L Sbjct: 82 GTYQYKDLQPGDEDAFSREPYVVWFQAPGTEVKEFVIVPQHTTPEAAVREIDELYDVDLD 141 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + +W + F+ GD N +Y+ + + + + + Sbjct: 142 VKQKW----------NSENFIFMGDLNAGCSYVPKKSWKNIRLRNHTEFVWLIGDNNDTT 191 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 + I V+ + ++ S + + + + L SDH PI + Sbjct: 192 VKSSTNCAYDRI--VVVGEKLVSSIVPGSANVFDFMVAYGLTEEQALEVSDHFPIEVRL 248 >gi|228937659|ref|ZP_04100296.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970548|ref|ZP_04131198.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977118|ref|ZP_04137519.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407] gi|228782566|gb|EEM30743.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407] gi|228789135|gb|EEM37064.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228822033|gb|EEM68024.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938155|gb|AEA14051.1| exodeoxyribonuclease III [Bacillus thuringiensis serovar chinensis CT-43] Length = 263 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 35/269 (13%), Positives = 72/269 (26%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99 L + + + D++ LQE+ V F + Sbjct: 18 EKIKYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGLLLLEELKALHVKDYNIT 77 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ + + ++ + +D+ R+ V + NGK I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK-TRKIVSTTIAYNGKDITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKGQINRLMGRVD----SNKLAFLMGDFNNNARLEG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +Q S Sbjct: 183 EGYEYMMQKGLYDTYGLAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQ---------S 233 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +SDH + + D Sbjct: 234 KKVHSSKVIFNGTNRNVISDHFGVEVQLD 262 >gi|156975999|ref|YP_001446905.1| hypothetical protein VIBHAR_04769 [Vibrio harveyi ATCC BAA-1116] gi|156527593|gb|ABU72678.1| hypothetical protein VIBHAR_04769 [Vibrio harveyi ATCC BAA-1116] Length = 451 Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 38/291 (13%), Positives = 86/291 (29%), Gaps = 36/291 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNAVA 81 +++ ++N+ + +SD ++ D++ LQE S +A Sbjct: 183 LQVATYNLWMIPS-------------VSSDIAARAAMMEHSLSGYDVLVLQEAFS-SARD 228 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +F + DS + + + + + A Sbjct: 229 PMFDALE----LEYPYQTDVVGGDSAALYDGGVVTLSRYPILETDALVFDHCSGTDCYAD 284 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + V ++ NG+ + + HL SF + L + +T++ + Sbjct: 285 -KGIVYTKIDKNGQIYHIFNTHLASFNTSAAKRLRRLQLGLLRTF-------MLTKQIPA 336 Query: 202 LVPFVIAGDFNRKINYLG-NNDDFWKTIDPNDSLIRFPKEKDSRCNANKN-------LRN 253 + AGDFN N T++ + +E + N Sbjct: 337 DEAVIYAGDFNIDKNSDFMEYFLMLATLEVDPPTYLGYREATFDPSINSYASAKYSGGSQ 396 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +DY ++ + + ++ + LSDH + + F Sbjct: 397 SEYLDYVLVSSEHRRAFENTNTVKLRQRVSEETWGEWHLSDHFSVEGQFVF 447 >gi|323356483|ref|YP_004222879.1| metal-dependent hydrolase [Microbacterium testaceum StLB037] gi|323272854|dbj|BAJ72999.1| metal-dependent hydrolase [Microbacterium testaceum StLB037] Length = 278 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 34/284 (11%), Positives = 71/284 (25%), Gaps = 29/284 (10%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 A + ++S+NI + + R LR + ++ QE A Sbjct: 10 AAPDLHVMSFNIR----RRFDRMTWPPADRWPMRKQRLRTFLSANRPHLLGSQEAMPDQA 65 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + R N + ++ +V+ P + + Sbjct: 66 LWVQQSLGSAYGRIGLGRGKNRDGEGTPLFYDRDRIEVEEWEQVMLSDTPDVPGSTGWGN 125 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R AV + ++ F + WL D + ++ Sbjct: 126 TIPRVAVIAQLRDRATDARFTFVNTHFDAFSRRARRRSAS----------WLHDLVAARE 175 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK--DSRCNANKNLR-NKIP 256 P + D N + F + + + N + R Sbjct: 176 ---RPLLFTADVNAHVRSAELAGMFADGLLVDTWAYAPARRTAEWGTFNNYASPRVGARR 232 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ID + + + D + + SDH P+ Sbjct: 233 IDALLATPDVGVRAVG---------IDPRPTGTQWPSDHLPVQA 267 >gi|264676398|ref|YP_003276304.1| exodeoxyribonuclease III Xth [Comamonas testosteroni CNB-2] gi|262206910|gb|ACY31008.1| exodeoxyribonuclease III Xth [Comamonas testosteroni CNB-2] Length = 267 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 34/275 (12%), Positives = 75/275 (27%), Gaps = 62/275 (22%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + + D + +QE+ + + + + + ++ + V Sbjct: 22 AWIEATAPDCICVQEIKAQAS--------DMAGRFEVLAGMKGYFHFAEKKGYSGVGVYT 73 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 ++ + D+ R VE + G+K V+ + S + + Sbjct: 74 RHEPSDVVVGFDIEEFDAEGRY-----VETRFDTPGRKFSVISAYFPSGSSGELRQEAKF 128 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------YLGNND 222 + + ++ FV+ GD N D Sbjct: 129 RFLAKMHSHL--------MHLKAERDFVLCGDINIAHQKEDLKNWRGNQKNSGFLPEERD 180 Query: 223 DFWKTID----PNDSLIRFPKEKDSRCNA-NKNLRNK---------IPIDYFVMDQNAYK 268 K + + + + + +A N+ +DY + Sbjct: 181 WMSKLLHKTEAGGGLVDVYRQLQPDTTDACYTWWSNRGQAYANNVGWRLDYHLATPAIAA 240 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ES +G++ SDH PI+I YD Sbjct: 241 LARTESI-----------YKGEKFSDHAPITIGYD 264 >gi|57157233|dbj|BAD83646.1| deoxyribonuclease I [Pagrus major] Length = 281 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 36/279 (12%), Positives = 89/279 (31%), Gaps = 29/279 (10%) Query: 29 WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AVAKVFPK 86 +NI + +++ + + DIV +QE+ + A ++ Sbjct: 25 FNIKSFGDKKSSNTT----------LMNIISTIV-HRYDIVLIQEVRDSDLSATKRLMEH 73 Query: 87 -NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 N + +++ S+ R++ V V++ G + + +R Sbjct: 74 VNKGSPQFRYSHIVSEPIGRSSYKERYLFLYREQTVSVVKNYTYDDGCEPCGTDTFSREP 133 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++ + + + +++ + ++ + +W + Sbjct: 134 FVVMFSSRYSAVKNFVLIPQHTSPDSAVKEVNALYDVVVDVRTRW----------NTNDI 183 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 V+ GDFN NY+ +D + + S + + D V+ + Sbjct: 184 VLLGDFNTDCNYVSGSDWQHIRLFTDKSFRWLIGNEVDSTVSQTTN---CAYDRIVVTTD 240 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 K ++ S + D S L SDH P+ ++ Sbjct: 241 MLKGVLLGSAQVYNFMTDLKLSHSLTLAVSDHYPVEVEL 279 >gi|322392394|ref|ZP_08065855.1| exodeoxyribonuclease [Streptococcus peroris ATCC 700780] gi|321144929|gb|EFX40329.1| exodeoxyribonuclease [Streptococcus peroris ATCC 700780] Length = 275 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 79/304 (25%), Gaps = 56/304 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWNI++L+ + + + + Q DADI+ +QE Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQD------VLQTLVAEDADIIAIQETKLSATGPTK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ + K S+P +GA S + R Sbjct: 55 KHLEVLEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDSEGR 113 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +V ++ + ++ L + Sbjct: 114 I-----ITLEFDTFFVTQVYTPNAGDGLKRLEERQVWDIKYAEYLAEL--------DKKK 160 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P + GD+N R + + + + F Sbjct: 161 PVLATGDYNVAHKEIDLANPASNHRSPGFTDEEREGFTNLLAKGFTDTFRHVHGDVPERY 220 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY++ + + + + DH PI Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGPRQ-----------DHTPI 269 Query: 299 SIDY 302 ++ Sbjct: 270 VLEI 273 >gi|170693993|ref|ZP_02885149.1| exodeoxyribonuclease III Xth [Burkholderia graminis C4D1M] gi|170141065|gb|EDT09237.1| exodeoxyribonuclease III Xth [Burkholderia graminis C4D1M] Length = 260 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 77/304 (25%), Gaps = 75/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++ N+N + + + +AD++ +QE+ Sbjct: 2 LRVITANLNGIRSAAKKGFF---------------DWFGEQNADVLCVQEIKCSQD---- 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + F + + + A + + +G R Sbjct: 43 ---DMTPEFLAPHDFTGYFQHAVKKGYSGAGVYTRHEPDEVV-----IGFGSEEFDPEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 VE+ K+ V+ +++ S + + L Sbjct: 95 Y-----VELRFGKLSVVSVYVPSGSSGEERQQAKYRFMDEFMPHLAQLAR--------ER 141 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N + + + + + + D R Sbjct: 142 EVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTKLFDEVGYVDVFRTLDQRPEQY 201 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY + + R + SDH P++ Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPGIASKAKRTEV-----------FRDIKFSDHAPLT 250 Query: 300 IDYD 303 +DYD Sbjct: 251 VDYD 254 >gi|28896473|ref|NP_802823.1| 3'-exo-deoxyribonuclease [Streptococcus pyogenes SSI-1] gi|28811724|dbj|BAC64656.1| putative 3'-exo-deoxyribonuclease [Streptococcus pyogenes SSI-1] Length = 313 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 37/327 (11%), Positives = 90/327 (27%), Gaps = 57/327 (17%) Query: 3 RKYVLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 + +++ + + + +++L+SWNI++L+ + + R + Sbjct: 17 KSLIVSFFVTITTRLSVRKRYQMKLISWNIDSLNAALTGESPRALLSR------AVLDTL 70 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 DADI+ +QE ++ + S + + KN Sbjct: 71 VAQDADIIAIQETKLSAKGPTKKHIEALLSYFPNYLHVWRSSVEPARKGYAGTMFLYKNT 130 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 ++P +GA + G ++ + + +V ++ + + Sbjct: 131 LNPVITFPEIGAPTTMDAEGR------IITLEFEDFFVTQVYTPNAGDGLRRLDDRQIWD 184 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWK 226 + L ++ P + GD+N R + + Sbjct: 185 HKYADYLTEL--------DAQKPVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERQGFT 236 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFS 276 + F + + IDY++ + + Sbjct: 237 NLLARGFTDTFRHVHGDIPHVYTWWAQRSKTSKINNTGWRIDYWLASNRIVDKVKRSEMI 296 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303 + DH PI +D D Sbjct: 297 SSGERQ-----------DHTPILLDID 312 >gi|302546099|ref|ZP_07298441.1| endonuclease/exonuclease/phosphatase [Streptomyces hygroscopicus ATCC 53653] gi|302463717|gb|EFL26810.1| endonuclease/exonuclease/phosphatase [Streptomyces himastatinicus ATCC 53653] Length = 257 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 73/291 (25%), Gaps = 45/291 (15%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 + VR++S+NI +L + D L + + D D+V + Sbjct: 5 LPASTSGPDGAVVRVLSYNIRSLRD----------------DREALARVIRACDPDVVCV 48 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 QE + K + + T + ++++ +L Sbjct: 49 QEAPRFFRWRKAVARLARETGLV---------YATGGATATGPMILTSLRAQVERTEDIL 99 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + R ++ G I L SL + + QA L Sbjct: 100 LPR--VPGLHRRGFATAVLRFGGGHRDDDGIRLGVVSCHLSL------AAAERYDQAGML 151 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 D + + V AGD N + + D + + + Sbjct: 152 LDRVAAL--DVPYAVAAGDINEQPDGRAFRRIAGTLRDGWATEPWGSEHTFDPGDP---- 205 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID + + +DH P+ Sbjct: 206 --RRRIDALFASDGIEI----IGCGVPSGLPGVGDADLRAATDHLPVLAAL 250 >gi|159491237|ref|XP_001703579.1| predicted protein [Chlamydomonas reinhardtii] gi|158270653|gb|EDO96491.1| predicted protein [Chlamydomonas reinhardtii] Length = 598 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 47/321 (14%), Positives = 87/321 (27%), Gaps = 57/321 (17%) Query: 8 ALVFFLVPCTASVA----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 A + +P A +R+ + N+ +L + Sbjct: 22 ACLGLTLPAGTGAAFGPPHPLRIATHNMQSLRLPGAARRVAAAALIW-----------AE 70 Query: 64 LDADIVFLQEMG-----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 L DI+ LQE A + + + S ++ S A VR+ Sbjct: 71 LRLDIICLQETHWTCRADQAAFEQTLQLIAYELHLSGWKVTGAQWSTSRATAGVAFLVRQ 130 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + + P L + AG R AV L + G+ I + + + + + + Sbjct: 131 ELWESSTITAPALSPVPTAMLAG-RLAV-LKLRWGGRSITIANTYFPAASTHAAEQAKRE 188 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR--------------KINYLGNNDDF 224 L +Q A + + AGDFN + Sbjct: 189 LISQLRTQAALS------AAATAGEVVIWAGDFNFVENPALDSSAGPGGRPGDAPLAALL 242 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDYFVMDQNAYKFLIQESFSEILYN 281 P + + +RC ++ +D + A + + + Sbjct: 243 RAADQPQMVDMYRHRHPTARCYSHLYRAPVKGGSRLDRIYVSAAAAAAVCHADIALVS-- 300 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 SDH P ID Sbjct: 301 ----------SSDHRPAFIDL 311 >gi|119026076|ref|YP_909921.1| exodeoxyribonuclease [Bifidobacterium adolescentis ATCC 15703] gi|154488848|ref|ZP_02029697.1| hypothetical protein BIFADO_02156 [Bifidobacterium adolescentis L2-32] gi|118765660|dbj|BAF39839.1| possible exodeoxyribonuclease [Bifidobacterium adolescentis ATCC 15703] gi|154082985|gb|EDN82030.1| hypothetical protein BIFADO_02156 [Bifidobacterium adolescentis L2-32] Length = 286 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 33/311 (10%), Positives = 74/311 (23%), Gaps = 57/311 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-AVA 81 + + + N+N + + + Q+A D+ +QE+ + + Sbjct: 2 TITITTSNVNGIRA---------------AKRKGIEQWAAKNTPDVWCMQEVRAPQNEID 46 Query: 82 KVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +F + + + + ++ + + + ++ A+D Sbjct: 47 PIFDEFGFEYATAGRIADQSGLDRMNEICRIKGRAGVGLLSALPVIDKRYGLPGLAEDVD 106 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 S +E V+ + L + + Sbjct: 107 SGRW----IEADVKTPQGYTVTVVCVYVH-AGNTDDPEKMKQKYRFLDTMLVRMGQLRDE 161 Query: 198 KKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEK 241 V+ GDFN K + + + Sbjct: 162 AAHGGKQAVLCGDFNIAHTPLDIKNAKANEKHAGFLPEERAYVDKWLGELEFVDVMRSLC 221 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + IDY + + + D + R Sbjct: 222 GDIQGPYTWWSQRGRAFDNNVGWRIDYQFATPELAE-------TARGFVIDKAPTYDLRW 274 Query: 293 SDHCPISIDYD 303 SDH P+SI YD Sbjct: 275 SDHAPLSITYD 285 >gi|262037299|ref|ZP_06010773.1| metal-dependent hydrolase [Leptotrichia goodfellowii F0264] gi|261748682|gb|EEY36047.1| metal-dependent hydrolase [Leptotrichia goodfellowii F0264] Length = 263 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 30/297 (10%), Positives = 81/297 (27%), Gaps = 52/297 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNAV 80 ++L++ N++ + +L + D D++ +QE+ + + Sbjct: 1 MKLLTINVH-----------AWIEENQDEKMEILAKVIAENDYDVIAMQEVNQSMNSLVL 49 Query: 81 AKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + ++ + + + +A+ K+ + + Sbjct: 50 FRAIRQDNYGWVLLDKISKYTDRTYYYHWSNSHIGYDKYDEGLAIITKHKLLDVDEF-YC 108 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 S + +RR +E G+ + H+ + + Sbjct: 109 TRAQSVNTITSRRINSATIEYKGQIMEFYTCHMNLPTNKEEKMSDN-------------- 154 Query: 192 KDWITQKKESLVPFVIAGDFN-RKINYLGNNDDFWKTIDPNDSLIRFPKEK----DSRCN 246 I ++ ++ ++ GDFN IN + + K+ + Sbjct: 155 IQRILKRSQTDNLKILMGDFNTDAINSPEDYKMILSQGLYDTYTAAIEKDSGITVGGNID 214 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + IDY ++ + +SDH + + D Sbjct: 215 GWSKNKEDKRIDYIFSNKK---------IKVLSSKVIFNGKNHPVVSDHYGLEVILD 262 >gi|254470152|ref|ZP_05083556.1| endonuclease/exonuclease/phosphatase family protein [Pseudovibrio sp. JE062] gi|211960463|gb|EEA95659.1| endonuclease/exonuclease/phosphatase family protein [Pseudovibrio sp. JE062] Length = 346 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 36/284 (12%), Positives = 72/284 (25%), Gaps = 52/284 (18%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 A+ ++S N+ L++ + D++ QE S Sbjct: 111 PEAKSFDVMSLNLLH----------------MQFGKEALQELIEKRQPDLIVFQETASAT 154 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + F + + + T + V K + + G + Sbjct: 155 PRLQAFLRENYQYAILPPEKKD-----------TDLTVFSKFPLENSKRNLVPGLGFNGY 203 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R + V +NG+KI + IH S + + ++ I + Sbjct: 204 I--PREFLSADVNVNGRKIQLYAIHPASP--------RSKRRLNGRTTYVDYVSKHIQKH 253 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + P ++ GD+N + P+ N +D Sbjct: 254 -RTDTPIMVLGDWNTPVWSDTFQKLLADLKLKTTFTSFVPQTTRYFINPFLGKVLGSKVD 312 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + D+ SDH PI Sbjct: 313 HITSSEKIIIK--------------DLMIGEDVGSDHFPIFATL 342 >gi|54307508|ref|YP_128528.1| extracellular nuclease [Photobacterium profundum SS9] gi|46911928|emb|CAG18726.1| hypothetical extracellular nuclease [Photobacterium profundum SS9] Length = 781 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 46/390 (11%), Positives = 103/390 (26%), Gaps = 100/390 (25%) Query: 15 PCTASVAQKVRLVSWNINTLSEQE---GVSLWKNSVKRTTSDYTL--------------- 56 + +++ S+N+ L G L + +D Sbjct: 294 APVEYIGGNIKVASFNVLNLFTSASEVGGDLNATCSDQADADAAKGCNRGAKTLSEFSLQ 353 Query: 57 ---LRQYAKNLDADIVFLQEMGSYNA--------------VAKVFPKNTWCIFYSTERLI 99 + K +DADI+ + EM + + + + + Sbjct: 354 RTKIVNALKAMDADILGIMEMENNGFGANSAIANLVTELNLQFNDSADHYAYIEIADEDK 413 Query: 100 NHSKRDSNNDIHTAIAVRKKNV--------RVLQQSYPLLGAKDSFS---RAGNRRAVEL 148 N K ++ I A+ R V + + + D + R ++ Sbjct: 414 NQGKYLGSDAIMVALIYRPAKVTPADDAQVIRMPEQHITGNNPDGEAKQLDKYQRDSLMQ 473 Query: 149 LVEING-----KKIWVLDIHLKS---FCFLDSLENTYSPSCSLLSQQAQWLK-----DWI 195 +I G + + V+ HLKS C+ D + Y + L + Sbjct: 474 TFKIVGTKKKKETLSVVVNHLKSKGSGCYEDWINGEYEDDPADLQGHCNAFRVSGAMTLS 533 Query: 196 TQKKESLVPFVIAGDFNRK--------INYLGNNDDFWKTIDPNDS-------------- 233 + K+ ++ GD N + K + + + Sbjct: 534 QELKKVKGDLLVMGDMNAYGMEDPVRVLTDYKPKKAERKIMSASGTSIAGQPLHATGIEA 593 Query: 234 ------LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + + + +D+ + +++ K ++ I E+ + Sbjct: 594 GKGLGLINLASEWHGDDSYSYSYGGELGSLDHALANKSLKKKVVGIEDWHINSVENSLFE 653 Query: 288 RG-------------KRLSDHCPISIDYDF 304 SDH P+ I + Sbjct: 654 YSGKYSGSLAKSEGPYSASDHDPVIISLKY 683 >gi|146318051|ref|YP_001197763.1| metal-dependent hydrolase [Streptococcus suis 05ZYH33] gi|253751249|ref|YP_003024390.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus suis SC84] gi|253753150|ref|YP_003026290.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus suis P1/7] gi|253754973|ref|YP_003028113.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus suis BM407] gi|145688857|gb|ABP89363.1| Metal-dependent hydrolase [Streptococcus suis 05ZYH33] gi|251815538|emb|CAZ51120.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus suis SC84] gi|251817437|emb|CAZ55177.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus suis BM407] gi|251819395|emb|CAR44833.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus suis P1/7] gi|292557816|gb|ADE30817.1| phosphatase [Streptococcus suis GZ1] gi|319757526|gb|ADV69468.1| metal-dependent hydrolase [Streptococcus suis JS14] Length = 263 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 34/298 (11%), Positives = 81/298 (27%), Gaps = 54/298 (18%) Query: 24 VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNA 79 ++L++ N++ L +R +L Q D++ LQE+ + + Sbjct: 1 MKLLTINVHAWL------------EERQDEKLDVLAQTIAEKAYDVIALQEVNQLITADL 48 Query: 80 VAKVFPKNTWCIFY---------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 V K + + + + + IA K + Sbjct: 49 VTKDLKADNYGLILLEKLRTLGQFDYSYYWSNSHIGYDKYEEGIAFLTKLPVYEVDQF-Y 107 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 S +R+ + L V + I + H+ + + + + Sbjct: 108 CSQNKSIDSILSRKIMGLTVFYQDQLIDLYSCHINLPGSEEEDQLDNIRTIVERT----- 162 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC----- 245 + ++ GDFN + + DS ++ Sbjct: 163 ---------GNRRFKILMGDFNTDAFSDREAYEAITELGLYDSYNLAMEKDQGITVEKAI 213 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +DY ++Q F+ +SDH + ++ + Sbjct: 214 DGWAGHSQEKRLDYIFLNQKKEVLSSLVIFNGENRPI---------ISDHFGVEVEIN 262 >gi|295396429|ref|ZP_06806591.1| exodeoxyribonuclease III [Brevibacterium mcbrellneri ATCC 49030] gi|294970731|gb|EFG46644.1| exodeoxyribonuclease III [Brevibacterium mcbrellneri ATCC 49030] Length = 272 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 78/305 (25%), Gaps = 67/305 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + S N+N + + + I+ LQE+ + N +A Sbjct: 2 ITVASVNVNGIRAAMRKGMEP---------------WFNQNTPQILTLQEVRAANDIAYS 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + YS + +AV + + +G D + R Sbjct: 47 VMEPFGGSAYSADAEA---------KGRAGVAVVSQTPAREVR----IGIGDEYFAGAGR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +G + V+ ++ S ++ + ++ L Sbjct: 94 WIECDYDLDDGSTLTVVSAYVHSGEAGTPKQDDKYRFLDRMKERLPQLARHADYA----- 148 Query: 204 PFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNA 247 ++ GD N L + F + + K Sbjct: 149 --LVTGDLNVGHTELDIKNWKANQKKAGFLPEERAYFDEFFGDLGWIDVHRKLSGEVPGP 206 Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + IDY + N + S G+R SDH P+ Sbjct: 207 YTWWSMRGKAFDNDAGWRIDYHMATPNLAELASNAQVH-------RAASWGERWSDHAPL 259 Query: 299 SIDYD 303 IDYD Sbjct: 260 VIDYD 264 >gi|268679182|ref|YP_003303613.1| exodeoxyribonuclease III [Sulfurospirillum deleyianum DSM 6946] gi|268617213|gb|ACZ11578.1| exodeoxyribonuclease III [Sulfurospirillum deleyianum DSM 6946] Length = 254 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 84/306 (27%), Gaps = 79/306 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 ++L+SWN+N + + + + D++ LQE+ ++ Sbjct: 1 MKLISWNVNGIRAVANKNAF---------------SWVDEEKPDVLCLQEIKAEAHQIPE 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +F C ++ +S S + + ++ + Sbjct: 46 PLFTHPFTCKHINSATKKGYSGTMSFS---------TRLFDTTNTAWHI------DHTKE 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R +E + + + +++ + + S + L+ Sbjct: 91 GRI-----LEHHFGDVVLFNVYFPNGQQSEERLRHKMQFYSDFLAHTEALRTM------- 138 Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 +I GD N L + T+ L F + + + Sbjct: 139 GKGIIICGDVNTAHREIDLANPKANEDISGFLPIERAWIDTLLAKGYLDTFREVHGNVKD 198 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 A + IDYF + + K L + + SDHCP Sbjct: 199 AYSWWSYRSGARERNVGWRIDYFFISKELQKNLKDAFILPHI-----------QGSDHCP 247 Query: 298 ISIDYD 303 + I+ Sbjct: 248 VGIEIT 253 >gi|289168236|ref|YP_003446505.1| hypothetical protein smi_1403 [Streptococcus mitis B6] gi|288907803|emb|CBJ22643.1| conserved hypothetical protein [Streptococcus mitis B6] Length = 271 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 37/281 (13%), Positives = 76/281 (27%), Gaps = 54/281 (19%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95 + L + D D++ QE+ +V + + + Sbjct: 17 EEKFQFLLEDILEKDYDLICFQEINQEITSPEVEVNDFYQALPAAEPIHQDHYVRLLVEK 76 Query: 96 -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148 + H +A+ K ++ L+ D + RR Sbjct: 77 LSEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVALA 134 Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208 ++GK++ V +HL + E + + L P ++A Sbjct: 135 ETVVDGKELAVASVHLSWWDKGFQEEWARFEAV------LKELNK----------PLLLA 178 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263 GDFN G + D+ ++ S + K IDY Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + ++ ++SDH +S + Sbjct: 239 KELA---------VEKLHVVFDGNKSPQVSDHYGLSAILSW 270 >gi|290958156|ref|YP_003489338.1| hypothetical protein SCAB_36991 [Streptomyces scabiei 87.22] gi|260647682|emb|CBG70787.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 925 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 75/288 (26%), Gaps = 43/288 (14%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A+ VR+++WN + + + D++ LQE+ Sbjct: 116 AAGGDNVRVLTWNTLWDRYDADLIDSAGRRPLLLRALR-------DAEVDVIALQEVE-- 166 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A+ + W T + + + + + + L K Sbjct: 167 AALLAMLLSEPWVRAEWTLGSDPRGR----DVAECGLLLLSRLPVREAAFHALGPHK--- 219 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 ++VE + + V HL S D L Sbjct: 220 ------AVASVVVEAGQRPLVVAATHLSSDHSADGAGRRT-----------AELARIAEG 262 Query: 198 KKESLVPFVIAGDFNRKINYL----GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 V+ GDFN + G D + +T P+D+ F + + Sbjct: 263 FAALDAGLVLLGDFNDGGDTPQVTLGMRDAWSETHGPDDATPTFDPVANPLAAVSSLTGR 322 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 +D ++ D G +SDH + + Sbjct: 323 ASRLDRVLVRGPGLA------VRSAELYGDTPSPDGLFVSDHYGVRAE 364 >gi|311114963|ref|YP_003986184.1| exodeoxyribonuclease III [Gardnerella vaginalis ATCC 14019] gi|310946457|gb|ADP39161.1| exodeoxyribonuclease III [Gardnerella vaginalis ATCC 14019] Length = 290 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 32/279 (11%), Positives = 70/279 (25%), Gaps = 44/279 (15%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN-------ND 109 + + ++ D+ +QE+ + ++ S + R + Sbjct: 23 MLDWVQDHTPDVWCMQEVRAPQDAIDPIMSKIKDLYTSKSGESGQNDRRFSVTNQICEIK 82 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 +A+ V Q+ ++D S R + G I V +++ + Sbjct: 83 GRAGVALVTTLPVVEQRYGLPGLSEDVDS---GRWVETDVHTPQGYDITVASVYVHAGNV 139 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN------------- 216 D L + L + ++ GDFN Sbjct: 140 DD--PQKMQQKFRFLDTMLKRLGELRDIAASGGNQAILCGDFNIAHTPLDIKNAKANEKS 197 Query: 217 ---YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQ 264 + I+ + + + +DY Sbjct: 198 AGFLPEERAYIDRWINEYEFVDVMRMLAGDIQGPYTWWSQRGKAFDNNVGWRLDYQFATP 257 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + D +S R SDH ++I Y+ Sbjct: 258 EIAETACG-------FVIDRAQSYDSRWSDHAALNIKYN 289 >gi|281491287|ref|YP_003353267.1| exodeoxyribonuclease III [Lactococcus lactis subsp. lactis KF147] gi|281375028|gb|ADA64546.1| Exodeoxyribonuclease III [Lactococcus lactis subsp. lactis KF147] Length = 334 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 33/311 (10%), Positives = 84/311 (27%), Gaps = 62/311 (19%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 + +SWNI++L+ + +R + + D++ +QE + K Sbjct: 53 KFISWNIDSLNA-----ALTGTSERAALSL-AVVKNLAQAQPDVLAIQETKLPSTGPKKA 106 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 + +++ S + ++ + K A R Sbjct: 107 HLEVLEELFKGYKIVWRSSVEPARKGYSGTMILYKETLPEPVITFPEIDAPEPMDAEGRI 166 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + + +V ++ + + + L ++ P Sbjct: 167 -----ITLEFPDFFVTTVYTPNAQEGLTRLDLRGIWDDNYRNYLTSL--------DAQKP 213 Query: 205 FVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIR------FPKEKD 242 GDFN + + F + ++ + K + Sbjct: 214 VFACGDFNAAYTEIDLANPRANHNSAGFTDQEREKFGQLLEAGFTDTFRKLHGQVEKFYE 273 Query: 243 SRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + + IDY+++ + + + G+RL Sbjct: 274 EGRSIYTWFAQRAKTSKLNNSGWRIDYWLVSNRLAQAV----------KVSEPLDSGERL 323 Query: 293 SDHCPISIDYD 303 DH PI ++++ Sbjct: 324 -DHVPILLEFE 333 >gi|16904254|gb|AAL30835.1|AF440398_3 DNA lyase-like protein [Mycosphaerella graminicola] Length = 594 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 40/337 (11%), Positives = 85/337 (25%), Gaps = 77/337 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +RL +WN+N + W N+ + + ++ DIV +QE + + Sbjct: 1 MRLTTWNVNGIRNPFSYPPWNNTRS-----FKSMFDILES---DIVVMQELKIQKKDLRD 52 Query: 82 KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQ---------QSYPLL 131 + + W ++S + +S T +R + + + P Sbjct: 53 DMVLVDGWDCYFSLPKYKKGYSGVGIYTRNATCAPIRAEEGLLGVLQSPSGTPYRDLPES 112 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS--LLSQQAQ 189 + + A + + + + + +F + S Sbjct: 113 ESIGGYPSAFQVAELGVDPAALDAEGRCVIVEFPAFVLFGVYVPANTSGLQDAFRSGFFL 172 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINY---------------------LGNNDDFWKTI 228 L I V+ GD N + G N + + Sbjct: 173 ALDCRIRNLMRQGKRVVLVGDLNVTRHEIDSAGHLEDIRKRNATHEDIVSGPNRRIFNQL 232 Query: 229 -------------DPNDSLIRFPKEKDSRCNA-NKNLRNK---------IPIDYFVMDQN 265 L + + K ID+ ++ Sbjct: 233 LTDGEVIGERDEGRDAGVLWDTTRGFHPTRRGMYTHWDTKKNARPGNSGSRIDFVLVADV 292 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + G SDHCP+ D+ Sbjct: 293 MQSWVKDANIQ-----------EGLLGSDHCPVYADF 318 >gi|21732296|emb|CAD38538.1| hypothetical protein [Homo sapiens] Length = 488 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 36/319 (11%), Positives = 76/319 (23%), Gaps = 43/319 (13%) Query: 24 VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R VS+NI S L+++ +AD++ LQE+ Sbjct: 174 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDR 233 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKN------------VRV 123 + P R+ H + ++ + + Sbjct: 234 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFYEALESDPLHKEL 293 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L++ A++ + + V +L + + + Sbjct: 294 LEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVA 353 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPN 231 L ++ +P + GDFN + + D + Sbjct: 354 L-----AHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEER 408 Query: 232 DSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDI 285 ++ K N +DY +D + S Sbjct: 409 CNMSLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQA 468 Query: 286 KSRGKRLSDHCPISIDYDF 304 SDH + D + Sbjct: 469 LPSVSHPSDHIALVCDLKW 487 >gi|54696842|gb|AAV38793.1| deoxyribonuclease I-like 1 [Homo sapiens] gi|61355625|gb|AAX41159.1| deoxyribonuclease I-like 1 [synthetic construct] Length = 302 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 72/301 (23%), Gaps = 40/301 (13%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 AL+F ++ AQ R+ ++N L+ + L + D Sbjct: 6 ALLFLILAN---GAQAFRICAFNAQRLTL---------AKVAREQVMDTLVRILARC--D 51 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVL 124 I+ LQE+ + A F + S + R +VL Sbjct: 52 IMVLQEVVDSSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVL 111 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSC 181 + R + + ++ +H L Y Sbjct: 112 SSYVY-----NDEDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFL 166 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + ++ GDFN L + + Sbjct: 167 EVSQHW-------------QSKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADG 213 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + + + + L + + + + +SDH P+ ++ Sbjct: 214 EDTTVRASTHCTYDRV--VLHGERCRSLLHTAAVFDFPTSFQLTEEEALNISDHYPVEVE 271 Query: 302 Y 302 Sbjct: 272 L 272 >gi|56477309|ref|YP_158898.1| exodeoxyribonuclease III [Aromatoleum aromaticum EbN1] gi|56313352|emb|CAI07997.1| exodeoxyribonuclease III [Aromatoleum aromaticum EbN1] Length = 260 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 35/307 (11%), Positives = 85/307 (27%), Gaps = 76/307 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++ N+N + G + +AD V +QE+ K Sbjct: 2 LRVITLNLNGVRSAVGKGF---------------LDWLATQNADAVCVQEL-------KA 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + I H ++ + + + + D+ R Sbjct: 40 QAGDLTGAVRTPNGYIGHFHHA-EKKGYSGVGLYARRPPDRIVEGLGIADIDAEGRF--- 95 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++++ + V+ ++L S + + L++ Sbjct: 96 ------LQLDFGPLSVVSLYLPSGSSSEERQQVKFGFMERFLPHLATLRN-------CGR 142 Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPK-EKDSRCN 246 ++ GD+N F + ++ + + + D+ Sbjct: 143 EIIVCGDWNIAHREIDLKNWKSNQKNSGFLPEERAWFSRVLEEQAWVDVYRRLYPDAGGE 202 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ +DY + + + +R SDH P Sbjct: 203 GYTWWSNRGQAWAKNVGWRLDYQIATPGIAATAKSAAV-----------YKAERFSDHAP 251 Query: 298 ISIDYDF 304 +++DYDF Sbjct: 252 LAVDYDF 258 >gi|322374633|ref|ZP_08049147.1| RgfB protein [Streptococcus sp. C300] gi|321280133|gb|EFX57172.1| RgfB protein [Streptococcus sp. C300] Length = 271 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 39/281 (13%), Positives = 74/281 (26%), Gaps = 54/281 (19%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95 + +L Q + D D++ QE+ +V N + S Sbjct: 17 EEKFQILLQDILDKDYDLICFQEINQEMTSPEVEVNNHYQALPSAEPIHQDHYVRLLVEK 76 Query: 96 -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148 + H +A+ K ++ L+ D + RR Sbjct: 77 LAEKGKNYYWTWAYNHVGYDRYHEGVAILSKTPIKARE--ILVSDVDDPTDYHTRRVALA 134 Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208 E+ GK++ + +HL + E + + L P ++A Sbjct: 135 ETEVEGKELALASVHLSWWDKGFQEEWARFEAV------LKELNK----------PLILA 178 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263 GDFN G + D+ + S + K IDY Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + ++SDH ++ + Sbjct: 239 KEL---------EVESLQVVFDGQNSPQVSDHYGLNAVLTW 270 >gi|326798804|ref|YP_004316623.1| exodeoxyribonuclease III Xth [Sphingobacterium sp. 21] gi|326549568|gb|ADZ77953.1| exodeoxyribonuclease III Xth [Sphingobacterium sp. 21] Length = 255 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 82/306 (26%), Gaps = 78/306 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80 ++++++N+N R + + K DADIV LQE+ Sbjct: 1 MKIITYNVNG--------------IRAAMRKDWI-NWLKESDADIVCLQEIKASPDQLID 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + ++ +S + + G Sbjct: 46 LLLIEGLGYEHYWFPAEKKGYSGTA--------------ILTKRSPKHVEYGCGIEAYDK 91 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + + +++ ++ + S D+ ++ Q + + + Sbjct: 92 EGRI-----IRADFEELSIISAYFPSGSSGDARQD-------FKYQFLDDFRRYSDKLLT 139 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCN 246 VI+GD+N + ++ N I + + Sbjct: 140 EFPSLVISGDYNICHRAIDIHNPKSNANSSGFLPEERAWMESFINSGYIDTFRHLHPEPH 199 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDY + + + Q + + SDHCP Sbjct: 200 QYTWWSYRANARAKNLGWRIDYNMASRALEGRIKQAAILTDALH-----------SDHCP 248 Query: 298 ISIDYD 303 + ++ D Sbjct: 249 VFLELD 254 >gi|154148197|ref|YP_001407152.1| exodeoxyribonuclease III [Campylobacter hominis ATCC BAA-381] gi|153804206|gb|ABS51213.1| exodeoxyribonuclease III [Campylobacter hominis ATCC BAA-381] Length = 251 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 78/303 (25%), Gaps = 76/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L R L + D + LQE+ Sbjct: 1 MKLISWNVNGL--------------RACVKNDALG-WITQEKPDFLALQEIK-------- 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ N ++ +A ++ + Sbjct: 38 VSEDKIPSEIYNLGFENLDVNSGEKAGYSGVASLHNLKCATFKNLFFQENEGR------- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +++ + +I + +I+ + ++ N L K+ Sbjct: 91 -----VLQHDFNEISLFNIYFPNGQKDENRLNFKMEFYDKFLIYLDKL-------KKQGR 138 Query: 204 PFVIAGDFNRKINYLGNNDDFWKT-------IDPNDSLIRFPKEKDSRCNA-------NK 249 +I GD N + + + I+ A Sbjct: 139 KIIICGDVNTAHREIDLKNPKSNSDRSGFLPIERAWIDKLLSHGFVDTFRAINGDKIAYS 198 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + IDYF + ++ + L + + SDHCP+ I Sbjct: 199 WWSYRFNARAKNAGWRIDYFFISEDLRENLTNAFILD-----------DIKGSDHCPVGI 247 Query: 301 DYD 303 + + Sbjct: 248 EIN 250 >gi|313202195|ref|YP_004040853.1| exodeoxyribonuclease III xth [Methylovorus sp. MP688] gi|312441511|gb|ADQ85617.1| exodeoxyribonuclease III Xth [Methylovorus sp. MP688] Length = 260 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 84/306 (27%), Gaps = 80/306 (26%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VAK 82 R++S N+N + + + + +ADIV +QE+ + A + Sbjct: 5 RIISANLNGIRSAANKGFYP---------------WLQQQNADIVCMQELKAQLADMTPE 49 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + ++ +S +Q ++G + A Sbjct: 50 MLNPEGYFGYFHYAEKKGYSGVGIYTR--------------VQPDAVIVGLGIADIDAEG 95 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R +E+ + V+ ++L S + + + + L+ + Sbjct: 96 RY-----LELQFGNLSVVSLYLPSGSSGEERQAFKFSVMTRFLVHLEALRA-------AG 143 Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 VI GD+N D + + + Sbjct: 144 RDVVICGDWNIAHKEADLKNWKGNKKNSGFLPEERAWLTDLFDRVGWVDVYRVLHPDTTD 203 Query: 247 A-NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 N+ IDY + + I S + +R SDH Sbjct: 204 ECYTWWSNRGQAWAKNVGWRIDYQIATPDFAAKAIAASI-----------YKLERFSDHA 252 Query: 297 PISIDY 302 P+ IDY Sbjct: 253 PLIIDY 258 >gi|91781453|ref|YP_556659.1| exodeoxyribonucleaseiii xth [Burkholderia xenovorans LB400] gi|91685407|gb|ABE28607.1| ExodeoxyribonucleaseIII xth [Burkholderia xenovorans LB400] Length = 259 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 76/304 (25%), Gaps = 75/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++ N+N + + + AD++ +QE+ Sbjct: 2 LRVITANLNGIRSAAKKGFF---------------DWFGEQKADVLCVQEIKCSQD---- 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + F + + + A + + +G R Sbjct: 43 ---DMTPEFMAPHDFTGYFQHAVKKGYSGAGVYTRHEPDEVV-----IGFGSEEFDPEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 VE+ K+ V+ +++ S D + L Sbjct: 95 Y-----VELRFGKLSVISVYVPSGSSGDERQQAKYRFMDEFMPHLAELAQ--------ER 141 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N + + + + + + D R Sbjct: 142 EVIVCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTKLFDEVGYVDVFRTLDQRPEQY 201 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY + + R + SDH P++ Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPGIASKAKRTDV-----------FRDIKFSDHAPLT 250 Query: 300 IDYD 303 +DYD Sbjct: 251 VDYD 254 >gi|300313958|ref|YP_003778050.1| exodeoxyribonuclease III protein [Herbaspirillum seropedicae SmR1] gi|300076743|gb|ADJ66142.1| exodeoxyribonuclease III protein [Herbaspirillum seropedicae SmR1] Length = 258 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 77/271 (28%), Gaps = 61/271 (22%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 ++ + D V +QE+ + A + F + + H + ++ + V Sbjct: 22 EWLQKEAPDFVCVQELKAQAA-------DMTEQFLAPAGYVGH-FHYAQKKGYSGVGVYS 73 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + + +G ++ R VE + + V+ ++ S + + Sbjct: 74 RRQPDSVR----IGFGNTEFDDEGRY-----VECDYGDLTVISLYAPSGSSSEERQEAK- 123 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGNND 222 + + + + ++S VI GD+N Sbjct: 124 ------FRFMEAFLPHLMELEKSGREVVICGDWNIAHKEIDLKNWKSNQKNSGFLPEERA 177 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCN-ANKNLRNK---------IPIDYFVMDQNAYKFLIQ 272 + D + + + A N+ IDY V + Sbjct: 178 WMTRIFDQLGLVDVYRRLHPETTGEAYTWWSNRGQAWANNVGWRIDYHVSTPGIAAKAVS 237 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +R SDH P+++ Y Sbjct: 238 AAI-----------YKEQRFSDHAPLTVVYS 257 >gi|300723413|ref|YP_003712716.1| exonuclease III [Xenorhabdus nematophila ATCC 19061] gi|297629933|emb|CBJ90553.1| exonuclease III [Xenorhabdus nematophila ATCC 19061] Length = 277 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 33/282 (11%), Positives = 71/282 (25%), Gaps = 66/282 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VS+NIN L + L + D++ LQE+ ++ Sbjct: 1 MKFVSFNINGL----------------RARPHQLAAIVEQHRPDVIGLQEI---KVHDEM 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + H +A+ + V + D+ R Sbjct: 42 FP-------LEEINKLGYHVFYHGQKSHYGVALLTRQKPVDVRKGFPTDGDDA-----QR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + +E + V++ F + + Q L+ ++ Sbjct: 90 RIIMADLETPLGLLTVIN-----GYFPQGESRDHPVKFPAKEKFYQDLQSYLGNNHSPES 144 Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242 +I GD N ++ + + + F + Sbjct: 145 NILIMGDMNISPTDSDIGIGENNQKRWLKTGKCSFLPEEREWMERLKNWGFIDTFRFQYP 204 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESF 275 + + ID + +Q S Sbjct: 205 EANDQFSWFDYRSKGFDDNRGLRIDLLLASHWLKGVSLQVSI 246 >gi|226955352|gb|ACO95347.1| DNase X (predicted) [Dasypus novemcinctus] Length = 305 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 28/287 (9%), Positives = 71/287 (24%), Gaps = 33/287 (11%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + R+ ++N L+ + L + DI LQE+ + Sbjct: 16 TEAFRICAFNAQRLTL---------AKVAREHVLDTLVRILARC--DITVLQEVVDSSGS 64 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA-KDSFSR 139 A F + + S+ + + + ++ L Sbjct: 65 AIPLLIRELNRF---DDSGPYEHLSSSPLGRSTYMEKYVYIYRSHKTQVLQSYLYKDLDD 121 Query: 140 AGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R + K + ++ +H L Y + Sbjct: 122 LFAREPFVAKFTLPSKVLPSLVLVPLHTTPKAVDQELNALYDVFLEVSQLW--------- 172 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 ++ GDFN L + + +++ + Sbjct: 173 ----PGEDVILLGDFNADCASLTKKRLGELALRTQEGFHWVIGDREDTTVRSSTHCAYDR 228 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 I + + + + + + + +SDH P+ ++ + Sbjct: 229 I--VLYGERCPSLVRAAGAFDFPGSFQLTEEQALAISDHYPVEVELN 273 >gi|256833418|ref|YP_003162145.1| Endonuclease/exonuclease/phosphatase [Jonesia denitrificans DSM 20603] gi|256686949|gb|ACV09842.1| Endonuclease/exonuclease/phosphatase [Jonesia denitrificans DSM 20603] Length = 260 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 41/283 (14%), Positives = 76/283 (26%), Gaps = 42/283 (14%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +Q++R+ S+N+ + +D L Q KNLDAD++ LQE Sbjct: 16 SQRLRVASYNVKGFA----------------ADRRALWQVLKNLDADVLALQEPPRSFQG 59 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + + A + V + P G + + Sbjct: 60 PARLRALAHSLHMECVVPGGYPFGGVTTALLVADRISSSVVAAGARVLPW-GLPQWWPQL 118 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +R ++ + L + + +W Sbjct: 119 VDRP------SWPSRRGFSWVDVGNVVVVSAHLGLNPAERVRHGRIIMDAVNEW------ 166 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 ++AGD N + D+ R + R + ID Sbjct: 167 GSERTIVAGDLNEEPGGPV---WELCDSLLPDARPRALSASPDVAVTFPSHRARRRIDSI 223 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + A + SF + SDH P+ I+ D Sbjct: 224 FVPSRAVVW----SFEV------RAGAAVSAASDHRPVVIEVD 256 >gi|322390094|ref|ZP_08063629.1| RgfB protein [Streptococcus parasanguinis ATCC 903] gi|321143221|gb|EFX38664.1| RgfB protein [Streptococcus parasanguinis ATCC 903] Length = 270 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 40/283 (14%), Positives = 74/283 (26%), Gaps = 54/283 (19%) Query: 48 KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST------------ 95 + + L++ D++ QE+ A V + S Sbjct: 14 ENAQQKFETLKEQILEAQYDVICFQEVNQEMASEVVKTDEYYQALPSAVAIHKDHFVRVL 73 Query: 96 ----------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + ++ +AV + L+ L+ D + RR Sbjct: 74 VEELAAQGLHYYWTWAYNHIGYDHLNEGVAVLSRQP--LKADEILVSNMDDPTDYHTRRV 131 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++GK+I V +HL + D P Q PF Sbjct: 132 AVAHTSVDGKEIAVASVHL---SWWDKGFQFEWPRIEKYFSQV-------------GKPF 175 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-----PKEKDSRCNANKNLRNKIPIDYF 260 ++AGDFN G ++ DS I + + + + IDY Sbjct: 176 ILAGDFNNPAGQEGYETILSSSLKLQDSFIEAKETKGTYTVGPGIDGWTDNQVPLRIDYV 235 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +SDH + + Sbjct: 236 FASPE---------WDIQRLHVIFDDQNKPHVSDHYGLEAELS 269 >gi|291548571|emb|CBL24833.1| Metal-dependent hydrolase [Ruminococcus torques L2-14] Length = 284 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 32/316 (10%), Positives = 80/316 (25%), Gaps = 69/316 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L++ N ++L E + D+V LQE+ + + Sbjct: 1 MKLMTLNTHSLVESS-----------YEEKKEKFIETLIAEQPDVVALQEVNQTASAGII 49 Query: 84 --FPKNTWCIFY-----------------------STERLINHSKRDSNNDIHTAIAVRK 118 + S + +A+ Sbjct: 50 PDVMLAGYKRCMDFGLPVREDNHAKEVVEALREKDVYYYWTWLSAKIGYGKYDEGMALLS 109 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K + + + L+ D + R+ + + E + + + ++ Sbjct: 110 KKPIMRVKQF-LISQTDDYDNWKTRKILGMQTEGSDDIFFTVH------------MGWWN 156 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 L +Q + ++ ++ + GDFN N + DS Sbjct: 157 DEEEPLKKQWEKMEKLTKSLEKKDRTIWLMGDFNSLDNVKQEGYELICESGWKDSYCLAE 216 Query: 239 KEKDSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 ++ + + +DY + + + Y Sbjct: 217 QKDSGVTVEEEIDGWRDGEGGGAVKDAKRLDYIFCNTQKKVKSSKVVCNGKNYPV----- 271 Query: 288 RGKRLSDHCPISIDYD 303 +SDH + I+ + Sbjct: 272 ----VSDHYGVIIEVE 283 >gi|302419937|ref|XP_003007799.1| DNA-(apurinic or apyrimidinic site) lyase [Verticillium albo-atrum VaMs.102] gi|261353450|gb|EEY15878.1| DNA-(apurinic or apyrimidinic site) lyase [Verticillium albo-atrum VaMs.102] Length = 334 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 40/338 (11%), Positives = 80/338 (23%), Gaps = 80/338 (23%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAK 82 R+ +WN+N + G W R + + + ADI+ QE + + Sbjct: 3 RITTWNVNGIRNPFGYQPW-----REKRTFEAMFDILE---ADIIIFQETKIQRKDLKDD 54 Query: 83 VFPKNTWCIFYS--TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + W +++S + +S T +R + P K Sbjct: 55 MVLIPGWDVYFSLPKYKKAGYSGVVIYTRNATCCPIRAEEGIFGVLCPPDSSTKFRDLPK 114 Query: 141 GNRR------------AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + E ++ G+ + +L+ S N Sbjct: 115 EQQIGGYPTAEQLSSDIDEATLDSEGRCV-ILEFPAFVLIGTYSPANRDESRQEFRLGYL 173 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINY----------------------LGNNDDFWK 226 L + + ++ GD N + + + F + Sbjct: 174 SALDARVRNLVAAGKQVILTGDLNVSRSEIDTINLSEQLRKEDMTMDDWMAIPSRRLFNQ 233 Query: 227 TIDPNDSLIRFPKEK----------------------DSRCNANKNLRNKIPIDYFVMDQ 264 + + + N IDY + Sbjct: 234 LLFEGQVRGDRDPGREQPVLWDICRCFHPDRKGMFTCWDTKRNTRPANNGARIDYLLCSA 293 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + I + G SDHCP+ Sbjct: 294 GIKDWFIDSNIQ-----------EGLHGSDHCPVYGTL 320 >gi|226944569|ref|YP_002799642.1| Endonuclease/exonuclease/phosphatase [Azotobacter vinelandii DJ] gi|226719496|gb|ACO78667.1| Endonuclease/exonuclease/phosphatase [Azotobacter vinelandii DJ] Length = 276 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 38/287 (13%), Positives = 84/287 (29%), Gaps = 53/287 (18%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----GSY 77 + +++ N + LR+ +++ AD+VFLQE+ + Sbjct: 33 DSLHILTVNTHKGFTALNRRF----------ILHELREAVRDVSADLVFLQEVLGTHERH 82 Query: 78 NAVAKVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + +P+ F + + + + D AV K ++ + Sbjct: 83 ARRHRDWPETPHYEFLADSMWGDFAYGRNAVYPDGDHGNAVLSKYPIQRHRNLDISVPG- 141 Query: 136 SFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R + +E+ G+ + + +HL S +Q L + Sbjct: 142 ----PERRGLLHCELEVPGQPEVHAICVHLGLL-------------ESHRQKQLGLLCEL 184 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 I + ++AGDFN + + F + Sbjct: 185 IGS-LPAQARILVAGDFNDWRLRASAR------LRDCGLIEVFEHSHGRCARSFPARLPL 237 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + +D + L + + + LSDH P++ + Sbjct: 238 LRLDRIYVRN-----LDPLHARVLSH------TPWPHLSDHLPLAAE 273 >gi|259482425|tpe|CBF76897.1| TPA: DNA lyase Apn2 (AFU_orthologue; AFUA_3G06180) [Aspergillus nidulans FGSC A4] Length = 612 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 38/338 (11%), Positives = 81/338 (23%), Gaps = 81/338 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 R+ +WN G++ + R+T + + + ADIV +QE + + Sbjct: 3 FRITTWN--------GLNPFSYEPWRSTRTFESMFDILE---ADIVVVQETKIQRKDLRD 51 Query: 82 KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVR----------KKNVRVLQQSYPL 130 + W ++S + +S T +R N V + P Sbjct: 52 DMVLVPGWDCYFSLPKVKKGYSGVAIYTRNATCAPIRAEEGLTGTLCPPNSLVSFRDLPE 111 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS--LLSQQA 188 + ++L E + + + +F + Sbjct: 112 DQQIGGYPTIEQLSKLKLDAETLDSEGRCVILEFPAFVLIGLYCPANRDESRDAFRQNFL 171 Query: 189 QWLKDWITQKKESLVPFVIAGDFN----------------------RKINYLGNNDDFWK 226 + + + GD N F + Sbjct: 172 DLMDARVRNLVALGKRVFVTGDINISRGEIDAAHAAENIKKGVTTEDDFVSAPARRLFNQ 231 Query: 227 TIDPNDSLIRFPKEKDSR-----CNANKNLR-----------------NKIPIDYFVMDQ 264 + + + ++ C + R IDY + Sbjct: 232 LLIDGKVVGDRDEGREQPVLFDICRSFHPKRKGMYTCWEQRINARPGNYGSRIDYVLCSL 291 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + G SDHCP+ + Sbjct: 292 DMKDWFFDSNIQ-----------EGLMGSDHCPVYAVF 318 >gi|169595280|ref|XP_001791064.1| hypothetical protein SNOG_00377 [Phaeosphaeria nodorum SN15] gi|111070752|gb|EAT91872.1| hypothetical protein SNOG_00377 [Phaeosphaeria nodorum SN15] Length = 635 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 38/336 (11%), Positives = 77/336 (22%), Gaps = 78/336 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 VR+ +WN+N + G W + + + AD+V +QE + + Sbjct: 2 VRITTWNVNGIRNPFGYKPWSE-----KRTFNAMFDILE---ADVVVMQELKIQRKDLTD 53 Query: 82 KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK------ 134 + W ++S + +S +R + + P Sbjct: 54 DMVLVPGWDCYFSLPKHKKGYSGVGIYTRQSVCAPIRAEEGLLGVLCPPGSTTPYRELPQ 113 Query: 135 DSFSRAGNRRAVELLVEINGKKIW------VLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 D+ A + ++ + V++ + S N+ Sbjct: 114 DASIGGYPTAAQVADLGVDPAALDAEGRCLVIEFPAFVLFGVYSPANSNGLRDDFRYGFL 173 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKIN---------------------YLGNNDDFWKT 227 L I ++ GD N + N + Sbjct: 174 TALDTRIRNLNNMGKNVILTGDLNVSRDLIDTARAEDSMRSEGMTHTEYLSTPNRRVFNQ 233 Query: 228 IDPND--------------SLIRFPKEKDSRCNANKNL---------RNKIPIDYFVMDQ 264 + N + R + ID+ + Sbjct: 234 LLMNGQVPGERDEGREAPVLYDLCREFHPDREGMYTHWEQKINARPGNFGSRIDFVLCSI 293 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + G SDHCP+ Sbjct: 294 AIKDWFKDSDIQ-----------EGLMGSDHCPVYA 318 >gi|304317722|ref|YP_003852867.1| endonuclease/exonuclease/phosphatase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779224|gb|ADL69783.1| Endonuclease/exonuclease/phosphatase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 248 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 74/287 (25%), Gaps = 47/287 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------S 76 + +++WNI ++G + + + K A IV LQE+ Sbjct: 2 TINILTWNIKAGQNKDGGYPDPKT-----ENLDKIADEIKTSGASIVCLQEVDAYTIRSG 56 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 N + N T + + N + A+ L Sbjct: 57 TNIHQAEYISNKLTAITGTTWNYKYITSINMNPCYYGNAIISSCSLTTALRVYLSKV--- 113 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + + NR + + V+ +V HL QAQ +KD + Sbjct: 114 -NSSENRSFLLVRVDFGSSYFYVGTAHLGLNGD--------------QVIQAQKIKDELN 158 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 S +I D N N N D C N N Sbjct: 159 NNGFSNERLIIGCDLNDGENSDTYNIMLNNVFSMVD--SGPAGICTLECYNNSNNPK--- 213 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID+ + + +SDH P+ + Sbjct: 214 IDFLFNCGTSIDATKSKVLQVD-------------ISDHRPVMAYIN 247 >gi|254574412|ref|XP_002494315.1| Mitochondrial membrane localized inositol phosphosphingolipid phospholipase C [Pichia pastoris GS115] gi|238034114|emb|CAY72136.1| Mitochondrial membrane localized inositol phosphosphingolipid phospholipase C [Pichia pastoris GS115] Length = 413 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 84/310 (27%), Gaps = 50/310 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++L+++N L + K+ +R + L D DIV LQE+ Sbjct: 2 SLKLLTFNTWGL-----KYVSKHRQERLRAIADELADD-TKHDYDIVALQEVWCDEDWEY 55 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + K + R +P+ G+ +F R Sbjct: 56 LTTKCNKKY-----PHSRRFYAGIIAGPGLCVLSRIPIESTFLYRFPINGSPSAFFRGDW 110 Query: 143 RR------AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + G+ I +L+ H+ + L+ + + QA Sbjct: 111 YVGKSVGVIKLAPLREGGRPIALLNSHMHAPYALNG----SASYLCHRTCQAWDFAHLAE 166 Query: 197 QKKESLVPFVIAGDFNRKINYLGNN------------DDFWKTIDPNDSLIRFPKEKDSR 244 + S V+ GD N + + + TID P+E+ Sbjct: 167 ALRSSGYAVVVVGDLNSRPGSIPYRIFQQIGQLSDSWELVHGTIDSKVVAQLSPEEQVIT 226 Query: 245 CNANKN-----------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + ++ +D+ ++ + S + S Sbjct: 227 AGTTCDSLLNTWRLKCAPQSAARLDFALVS---ADRIKPTSAKVVFT---TPIPNVGSYS 280 Query: 294 DHCPISIDYD 303 DH + + Sbjct: 281 DHFAYATTLE 290 >gi|229131369|ref|ZP_04260269.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196] gi|228652113|gb|EEL08050.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196] Length = 263 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 71/269 (26%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS--------- 102 L + + D D++ LQE+ V F + Sbjct: 18 EKIKYLAKAIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELRALNVKEYNII 77 Query: 103 ---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ V + ++ + KD+ R+ V + N K I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNIVKEDTFFVSENKDTTYWK-TRKIVSATIAYNDKNITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL ++ Q L + + S + GDFN G Sbjct: 137 YSCHLGW----------WNDEEESFKDQVDRLMERVN----SNELSFLMGDFNNNARLEG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + S Sbjct: 183 EGYEYTMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKQNLRIDLIL---------SNRS 233 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +SDH + + D Sbjct: 234 KTVNSSKVIFNGTNRNVISDHFGVEVQLD 262 >gi|260820272|ref|XP_002605459.1| hypothetical protein BRAFLDRAFT_212438 [Branchiostoma floridae] gi|229290792|gb|EEN61469.1| hypothetical protein BRAFLDRAFT_212438 [Branchiostoma floridae] Length = 566 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 37/315 (11%), Positives = 84/315 (26%), Gaps = 36/315 (11%) Query: 24 VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 R+VS+NI LS LL + +AD++ LQE G Sbjct: 251 FRVVSYNILADVYAKTELSLTVLYPYCPPYALELDYRRQLLLKELVGYNADLLVLQETGK 310 Query: 77 ---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 +A+ + Y + + + + ++ + Sbjct: 311 SLFNDALVPALDLSGMDGVYIGKGQQSEGEAIFYHRDKFRFLSQEDINVGECLT-SDPSC 369 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDI-----HLKSFCFLDSLENTYSPSCSLLSQQA 188 D + AV V + V+ + + C ++ + + + Q Sbjct: 370 HDLQKWLSHSPAVLNKVTSRSTVLQVVLLESIEDPSRRLCVANTHLYWHPRAPHVRLVQM 429 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC--- 245 ++ + +S V ++ GD N + + + + + + + Sbjct: 430 AVCLKFLEK-IDSSVSLLLCGDLNSHPTSGLYELLTKQAVPASHTDWFPAEPQTTDEGVD 488 Query: 246 ---------------NANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRG 289 N + +DY ++ + + Sbjct: 489 LSHPFTLTSACGLPDYTNYVGGFQGTLDYIMIDTCQLAVNQTIPMPTHEEVTANTALPSI 548 Query: 290 KRLSDHCPISIDYDF 304 SDH I D ++ Sbjct: 549 VFPSDHIAIIADVEW 563 >gi|116330262|ref|YP_799980.1| sphingomyelinase B [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116123951|gb|ABJ75222.1| Sphingomyelinase B [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 741 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 40/300 (13%), Positives = 93/300 (31%), Gaps = 26/300 (8%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + S +++++S N++ +S + W + ++ ++ Y K+ DI+ + + Sbjct: 259 SNSQNLEIKILSHNVSLMST--QLPAWADWGQKERAEQIANSDYIKHQ--DIIVFEGLSD 314 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSY 128 NA + Y TE + + + + + + + Y Sbjct: 315 ANARKILLDGIRSQYPYQTEAVGSTRNGWNATLGVYRQSTSADGGVVIVSQWPIEEKVQY 374 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + ++ + + NGKK V+ ++ S + Q Sbjct: 375 IFDNPGCGVESSYHKGFNYVRINKNGKKFHVIGTQVQMVGPACSDLGRS-----VRMNQF 429 Query: 189 QWLKDWITQKK-ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 +KD+I K +IAGD N P +D + NA Sbjct: 430 NNIKDFIDTKAIPRDELVLIAGDLNVTRGSDEYYGMLTSLNVSEPKYAGIPYTQDPQVNA 489 Query: 248 ----NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----KRLSDHCPIS 299 +Y ++ ++ + + ++ + + K SD P+ Sbjct: 490 LTALRHRDSQPTYTNYVLVSKSHSQPEVWQNLAYDPISPKIWKRSNGHISYEFSDSYPVY 549 >gi|329847403|ref|ZP_08262431.1| exodeoxyribonuclease III [Asticcacaulis biprosthecum C19] gi|328842466|gb|EGF92035.1| exodeoxyribonuclease III [Asticcacaulis biprosthecum C19] Length = 265 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 77/306 (25%), Gaps = 70/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +WN+N ++ + + DI+ LQE+ Sbjct: 3 LSFATWNVN----------------SVRLRMPQIQAFLAQTEIDILCLQEIKCQE----- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + L + +A+ K P F R G Sbjct: 42 ----HEFPYDAFRALGFEHIHVAGQKGWHGVAIVSKVPFESGDLLP-------FCRRGEA 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 RA + V+ + + + ++ + + L + L + Q+ Sbjct: 91 RAQAIRVDN----VDIWNFYIPAGGDVPDRTTNDKFDHKLEFY--ERLCTHLAQR-NRDH 143 Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 P +I GD N + + F + D F Sbjct: 144 PLLICGDLNIAPGEFDVWSHRQMLRVVSHTPLEIEAFGNFMACGDFHDPFRVAYPEPQKI 203 Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ +++ + + D + SDH P Sbjct: 204 FTWWSYRASDYRASNRGLRLDHVLLNPALMARVAN-----LTAKIHDDVRGWTQPSDHVP 258 Query: 298 ISIDYD 303 + ++ Sbjct: 259 AQVTFE 264 >gi|257452011|ref|ZP_05617310.1| Endonuclease/exonuclease/phosphatase [Fusobacterium sp. 3_1_5R] Length = 265 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 35/297 (11%), Positives = 90/297 (30%), Gaps = 54/297 (18%) Query: 24 VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++L++ N++ L ++ LL + D++ +QE+ Sbjct: 1 MKLLTINVHSWL------------EEKQEEKMELLAKVIAEKRYDVIAMQEVNQKIEARL 48 Query: 83 VFPKNTWCIFYS------------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 + + F + IA+ ++ + ++ + Sbjct: 49 LKGEIREDNFLYQLCKKIEKYTEEKYEYHWSHSHIGFDIYEEGIALLTRHSILEKEDFYC 108 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 +K +S + +R+ V++ +EI GK+I H+ ++ + Sbjct: 109 TNSKTVYSIS-SRKIVKIFLEIEGKEIEFYSCHMNLPNCIEENMEQNIQN---------- 157 Query: 191 LKDWITQKKESLVPFVIAGDFNRK--INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 I + ++ GDFN + + + + +L + + + Sbjct: 158 ----ILKHSSRNCLKILMGDFNTDAFHDQSSYQKILEQGLFDSYTLSKKKDDGVTVYKNI 213 Query: 249 KNLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N + +DY + + F+ Y +SDH + + Sbjct: 214 SGWENSVEEKRLDYIFLTEQYEVESSYVIFNGKNYPC---------ISDHNGLEVIL 261 >gi|91206582|sp|Q2QDF1|DNSL1_CERAE RecName: Full=Deoxyribonuclease-1-like 1; AltName: Full=DNase X; AltName: Full=Deoxyribonuclease I-like 1; Short=DNase I-like 1; Flags: Precursor gi|73921488|gb|AAZ94274.1| DNase X [Chlorocebus aethiops] Length = 302 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 72/301 (23%), Gaps = 40/301 (13%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 AL+F ++ AQ R+ ++N L+ + L + D Sbjct: 6 ALLFLILVN---GAQAFRICAFNAQRLTL---------AKVAREQVMDTLVRILARC--D 51 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVL 124 I+ LQE+ + A F ++ S + R +VL Sbjct: 52 IMVLQEVVDSSGSAIPLLLRELNRFDASGPYSTLSSPQLGRTTYVETYVYFYRSHKTQVL 111 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSC 181 + R + + ++ +H L Y Sbjct: 112 SSYVY-----NDEDDVFAREPFVAQFSLPSDVLPSLVLVPLHTTPKAVEKELNALYDVFL 166 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + ++ GDFN L + + Sbjct: 167 EVSQHW-------------QSKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADG 213 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + I + + L + + + +SDH P+ ++ Sbjct: 214 EDTTVRASTHCAYDRI--VLHGERCRSLLHTAAAFDFPTTFQLTEEEALNISDHYPVEVE 271 Query: 302 Y 302 Sbjct: 272 L 272 >gi|296161384|ref|ZP_06844191.1| exodeoxyribonuclease III Xth [Burkholderia sp. Ch1-1] gi|295888370|gb|EFG68181.1| exodeoxyribonuclease III Xth [Burkholderia sp. Ch1-1] Length = 259 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 77/304 (25%), Gaps = 75/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++ N+N + + + AD++ +QE+ Sbjct: 2 LRVITANLNGIRSAAKKGFF---------------DWFGEQKADVLCVQEIKCSQD---- 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + F + + + A + + +G R Sbjct: 43 ---DMTPEFMAPHNFTGYFQHAVKKGYSGAGVYTRHEPDEVV-----IGFGSEEFDPEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 VE+ K+ V+ +++ S D + L Sbjct: 95 Y-----VELRFGKLSVISVYVPSGSSGDERQQAKYRFMDEFMPHLAELAQ--------ER 141 Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GD N + + + + + + D R Sbjct: 142 EVIVCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTKLFDEVGYVDVFRTLDQRPEQY 201 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ IDY + + + R + SDH P++ Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPDIASKAKRTDV-----------FRDIKFSDHAPLT 250 Query: 300 IDYD 303 +DYD Sbjct: 251 VDYD 254 >gi|319404920|emb|CBI78520.1| conserved hypothetical protein [Bartonella sp. AR 15-3] Length = 277 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 36/283 (12%), Positives = 78/283 (27%), Gaps = 51/283 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + + + S+NI+ + + + + L ADI+ LQE Sbjct: 30 SYDLTVASYNIHKCVGVDKIFNPV-----------RIVRVITELQADILALQEADRRFGK 78 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + N A+ + R+ S L Sbjct: 79 RTGLIDLQLLKAETGLIPVPLKTMSPNGHGWHGNALFLRQGRIHNISQITLPG------F 132 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R A+ + +++ I V+ H F ++Q + L + + Sbjct: 133 EPRGAIIVELKMKSGFIRVIAAHFGLFRHS-------------RNKQVKMLLALLKKY-- 177 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 S++P ++ GD N + + + + + + +D Sbjct: 178 SVMPTLLVGDLN---------EWRKGKSSSLNFFFPYFDITFGSVPSFPSPFPFLALDRI 228 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + I+ E+ + SDH PI + Sbjct: 229 FAFPH----------QLIINVENHYSPLARIASDHLPIKAYLN 261 >gi|282855380|ref|ZP_06264703.1| exodeoxyribonuclease III [Pyramidobacter piscolens W5455] gi|282586760|gb|EFB92005.1| exodeoxyribonuclease III [Pyramidobacter piscolens W5455] Length = 307 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 72/304 (23%), Gaps = 75/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++N+N+L S +L ++ DI+ LQE + Sbjct: 52 MRVATFNVNSL----------------RSRLPILERWLPGAGVDILALQETKVQD----- 90 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ K + G D S + Sbjct: 91 -----QEFPLADMEQLGYRAAFRGEKSYNGVAILSKREPDEV----IHGFSDGVSPLWDT 141 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + IW+LD ++ + + + Sbjct: 142 RLIAARF----GDIWILDTYVPQGKEITHPDYEAKKEFLRRTAALIA--------ARKDE 189 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + GD N L D + + + + Sbjct: 190 KLLWTGDLNVAPTELDVTNPANKKDHVCFVKELRDLFAELCAPLVVDLL-RVHHPGEELY 248 Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ + D ++ SDH P+ Sbjct: 249 SFFDYRIKNALERRIGWRIDHMLATPALAGQSRACWI-------DTEPRGWEKPSDHTPM 301 Query: 299 SIDY 302 D+ Sbjct: 302 LADF 305 >gi|227494748|ref|ZP_03925064.1| possible exodeoxyribonuclease III [Actinomyces coleocanis DSM 15436] gi|226831748|gb|EEH64131.1| possible exodeoxyribonuclease III [Actinomyces coleocanis DSM 15436] Length = 273 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 30/272 (11%), Positives = 70/272 (25%), Gaps = 50/272 (18%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + D++ LQE+ + + + W + + + + + Sbjct: 21 MASVLAETAPDVLALQEVRANDKILADLMGEDWEMVNYSCEIKGRAGVAV-------LVR 73 Query: 117 RKKNVRV--LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 R +V + + D R +E+ V + + V+ +L S Sbjct: 74 RSSHVELLADSARFGAPEGGDKVPVDTGRW-LEVDVVDGDRTVTVISAYLHSGELGTEKM 132 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-------- 226 + + + + + + S V+ GD N + + Sbjct: 133 DQK-------YAHLKLVTERMAEIVASGKHAVVVGDLNIVRSEKDIKNWKGNHNKSAGVM 185 Query: 227 ---------TIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYK 268 + + I + + IDY Sbjct: 186 DEEIAYVDGWMSSGWTDISRQLHGAEQQGPYTWWSWRGKSFDNDAGWRIDY-------QL 238 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + + D + KR SDH P+ + Sbjct: 239 ATAELAATATSCVVDRADAYEKRFSDHAPLRV 270 >gi|223982777|ref|ZP_03633005.1| hypothetical protein HOLDEFILI_00279 [Holdemania filiformis DSM 12042] gi|223965277|gb|EEF69561.1| hypothetical protein HOLDEFILI_00279 [Holdemania filiformis DSM 12042] Length = 656 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 88/313 (28%), Gaps = 63/313 (20%) Query: 2 IRKYVLALVFFLVPCTASVAQ-----------KVRLVSWNINTLSEQEGVSLWKNSVKRT 50 I K+ L L+ ++P T A +R+ +WNI + Sbjct: 4 IMKFTLGLLLLMLPVTGCSASPQTSAGSSGPVTLRVGTWNI---------------AAKN 48 Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 D + + D V +Q++ N V + +K + Sbjct: 49 HPDTQAMAELFAQHHLDAVGIQKVDVLNDRNPV--DMVQSFVNEDYPYAHFAKGRDFANG 106 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 + + + + S PL ++ R +++E +G +I + + HL Sbjct: 107 AFGVGILSRYEPLAVSSIPLESTGSRATKTLER----VVIEKDGVQIALYNTHLSW---- 158 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 + L +Q + + + + + +I DFN + + Sbjct: 159 --------ENLDLRRRQIAQVIERVN--ADPVEYKIITADFNTDQHAYEYSMFRDNFNLA 208 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 N N + D + I DI+ Sbjct: 209 NGY------------NGMWYDTYREGDD-----PSMQVLTIDNVLCTKNMRITDIQRVES 251 Query: 291 RLSDHCPISIDYD 303 LSDH +++ Sbjct: 252 ELSDHDLFYAEFE 264 >gi|53802367|ref|YP_112853.1| exodeoxyribonuclease III [Methylococcus capsulatus str. Bath] gi|53756128|gb|AAU90419.1| exodeoxyribonuclease III [Methylococcus capsulatus str. Bath] Length = 257 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 87/307 (28%), Gaps = 80/307 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 +R+++ N+N + + + +ADIV LQE+ + Sbjct: 1 MRIITLNVNGIRSAARKGFF---------------DWLPKQNADIVCLQEIKAQTTQLND 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++F ++ +Y + + +A+ + D+ +R Sbjct: 46 ELFWPESYACYYLEAEKKGY----------SGVALYARKEPDDVIQGLGWDDMDTEARY- 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E ++ V+ +++ S + + ++ ++ S Sbjct: 95 --------LEARFGELSVVSLYIPSGSSSEQRQ-------AVKFGFLDRFLPFLDDCARS 139 Query: 202 LVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 ++ GD+N + + + F Sbjct: 140 GRQYIFCGDWNIAHKPIDLKNWRSNQKNSGFLPEERAWLDRVFEEAGWVDAFRAVNPEPE 199 Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 N+ IDY V+ + + + + +R SDH Sbjct: 200 -QYTWWSNRGQAWAKNVGWRIDYQVVSPGLRELIRSAAI-----------YKEERFSDHA 247 Query: 297 PISIDYD 303 P+ IDYD Sbjct: 248 PLIIDYD 254 >gi|228924088|ref|ZP_04087364.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835578|gb|EEM80943.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 334 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 88/311 (28%), Gaps = 60/311 (19%) Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 T + + + +D DI+ +QE S +F +N + S + ++ Sbjct: 28 THETVSRVADTIREIDPDILAIQEAPSRPEEMALFIQN----YLSNNGESIYKFILGDSG 83 Query: 110 IHTAIAVRKK-----------NVRVLQQSYPLLGAKDSF----SRAGNRRAVELLVEING 154 +A+ K + + P L D S R + + +I G Sbjct: 84 QQQKLAILYKPNAVDSLMLAPHPEIKNLIDPWLADIDGDELLESYEFTRSPLVINTQIGG 143 Query: 155 KKIWVLDIHLKSFCFL------------DSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + ++ +H KS + + + S +A ++ ++ + Sbjct: 144 HHLQLIVLHTKSNFVNLGKEMWENLATRQNYVHEALRNRRRNSAEAMRVRQYVDSMLHAD 203 Query: 203 --VPFVIAGDFNRKINYLGNNDDFWKTIDPN-----------DSLIRFPKEKDSRCNANK 249 ++ GD N ++ + E Sbjct: 204 LTKNIIVLGDLNDGPGMDYFERNYLTHNTVDVIVGSTFEPEFIFHHAQHDENPQDRYTAV 263 Query: 250 NLRNK-------IPIDYFVMDQNAYK----FLIQESFSEI-----LYNEDDIKSRGKRLS 293 + +D+ ++ +Q S + ++ R R S Sbjct: 264 FDDFVTGEANSHLLLDHILLSPGLSTNSGLRRVQNSGKIHHAEYNNHTVNNGNFRENRPS 323 Query: 294 DHCPISIDYDF 304 DH P+SI ++ Sbjct: 324 DHRPVSILLEY 334 >gi|162457539|ref|YP_001619906.1| hypothetical protein sce9253 [Sorangium cellulosum 'So ce 56'] gi|161168121|emb|CAN99426.1| hypothetical protein sce9253 [Sorangium cellulosum 'So ce 56'] Length = 231 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 34/247 (13%), Positives = 61/247 (24%), Gaps = 26/247 (10%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 L + +L ++ LQE+ + A + + + S A+ Sbjct: 2 LARLIGDLRPCLLGLQEVHAPAASGDLGQAGELSRLAGGYRAWFAPGRVAASGECEGVAL 61 Query: 115 AVRKKNVRVLQQSYPL-LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 R+ + L L D F R R + + G + VL HL + Sbjct: 62 LCREDIEVLDHSVEALTLDRDDPFERDSQRVVLRAAIRHAGAVVDVLVTHLSLSKRARAR 121 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 S + +Q K V+ GDFN + + + Sbjct: 122 TVRELVSFAARERQ-----------KSGSHGAVLMGDFNALPSEEAVCYLQASAGNGSWL 170 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 IDY + + + S Sbjct: 171 DAWTQAHPGKAGGTWPAGLPLRRIDYVFVQPG------------EGWAITRCERAPFSGS 218 Query: 294 DHCPISI 300 DH ++ Sbjct: 219 DHLGVAA 225 >gi|331266731|ref|YP_004326361.1| metal-dependent hydrolase superfamily protein [Streptococcus oralis Uo5] gi|326683403|emb|CBZ01021.1| metal-dependent hydrolase superfamily protein [Streptococcus oralis Uo5] Length = 271 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 38/281 (13%), Positives = 74/281 (26%), Gaps = 54/281 (19%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95 + +L + + D D++ QE+ +V N + S Sbjct: 17 EEKFQILLRDILDKDYDLICFQEINQEMTSPEVEVNNHYQALPSAEPIHQDHYVRLLVEK 76 Query: 96 -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148 + H +A+ K ++ L+ D + RR Sbjct: 77 LAEKGKNYYWTWAYNHIGYDRYHEGVAILSKTPIKARE--ILVSDVDDPTDYHTRRVALA 134 Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208 E+ GK++ + +HL + E + + L P ++A Sbjct: 135 ETEVEGKELALASVHLSWWDKGFQEEWARFEAV------LKELNK----------PLILA 178 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263 GDFN G + D+ + S + K IDY Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + ++SDH ++ + Sbjct: 239 KEL---------EVESLQVVFDGQNSPQVSDHYGLNAVLTW 270 >gi|320592520|gb|EFX04950.1| DNA lyase [Grosmannia clavigera kw1407] Length = 795 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 41/343 (11%), Positives = 77/343 (22%), Gaps = 85/343 (24%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVAKVF 84 V+WN+N + + W N L+ LDADIV QE+ + + + Sbjct: 12 VTWNVNGIRNPFKYAPWNNDKT--------LQAMFDRLDADIVCFQEVKTPKPSLTDDLV 63 Query: 85 PKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRK--------KNVRVLQQSYPLLGAKD 135 W FYS +S + R + + + Sbjct: 64 FIPGWDSFYSFPHSQTGYSGVSVYTRDSCCVPTRVEEGVTGVLRAPGTTTRYIDRPADRQ 123 Query: 136 SFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSL--LSQQAQWL 191 R+ V + + L + F ++ L Sbjct: 124 IGGYPTERQLQSAAVARDLIDAEGRCLVLDFPLFVLINVYCPARRNDDRTDFRDAFLLAL 183 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLG---------------------------NNDDF 224 + + V+ GD N ++L + F Sbjct: 184 DARVRNLVAAGRHVVLCGDMNTMRHHLDTAAVWGHHGQVLPAEALAFDEDYLSLRSAAIF 243 Query: 225 WKTIDPNDSLIRFPKEKDSRCNA----------------NKNLR---------NKIPIDY 259 + + D + + ID+ Sbjct: 244 GRLLFDGDRITNTTTDIPPSSPPILHDACRELHPQRRGMYTCWDTRKNHRPANFGSRIDF 303 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + L+ SDHCP+ + Sbjct: 304 VLCSPRLMQLLV----------IQADIQPQLLGSDHCPVYVVL 336 >gi|294788545|ref|ZP_06753787.1| exodeoxyribonuclease III [Simonsiella muelleri ATCC 29453] gi|294483422|gb|EFG31107.1| exodeoxyribonuclease III [Simonsiella muelleri ATCC 29453] Length = 259 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 76/307 (24%), Gaps = 78/307 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81 +R++S N+N + Y ADIV +QE+ + + Sbjct: 1 MRIISANVNGIRSAYKKGF---------------LAYIAQSGADIVCVQELKAQESDLSD 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + +S + + +G Sbjct: 46 DMQRPHGMHGVWHCAQKRGYSGVAIYSKQKP--------------DHVQIGLGIEKFDNE 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R V + + V+ ++L S + + LK S Sbjct: 92 GRF-----VRADFGHLSVISLYLPSGTSAEERQAYKYEFLDAFYPLLAELKA-------S 139 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCN 246 V+ GD+N + + + + + Sbjct: 140 GRDVVVCGDWNIAHQNIDIKNWKGNLKNSGFLPEEREWIGHVITKLGWVDIWRTLYPDVA 199 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N+ IDY ++ N + + SDH P Sbjct: 200 GYTWWSNRGQAYANDVGWRIDYQMVTPNLATKAHTAHV-----------YKEVKFSDHAP 248 Query: 298 ISIDYDF 304 + +DYD+ Sbjct: 249 LVVDYDY 255 >gi|308234996|ref|ZP_07665733.1| putative exodeoxyribonuclease III [Gardnerella vaginalis ATCC 14018] Length = 287 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 32/279 (11%), Positives = 70/279 (25%), Gaps = 44/279 (15%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN-------ND 109 + + ++ D+ +QE+ + ++ S + R + Sbjct: 20 MLDWVQDHTPDVWCMQEVRAPQDAIDPIMSKIKDLYTSKSGESGQNDRRFSVTNQICEIK 79 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 +A+ V Q+ ++D S R + G I V +++ + Sbjct: 80 GRAGVALVTTLPVVEQRYGLPGLSEDVDS---GRWVETDVHTPQGYDITVASVYVHAGNV 136 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN------------- 216 D L + L + ++ GDFN Sbjct: 137 DD--PQKMQQKFRFLDTMLKRLGELRDIAASGGNQAILCGDFNIAHTPLDIKNAKANEKS 194 Query: 217 ---YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQ 264 + I+ + + + +DY Sbjct: 195 AGFLPEERAYIDRWINEYEFVDVMRMLAGDIQGPYTWWSQRGKAFDNNVGWRLDYQFATP 254 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + D +S R SDH ++I Y+ Sbjct: 255 EIAETACG-------FVIDRAQSYDSRWSDHAALNIKYN 286 >gi|333029608|ref|ZP_08457669.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM 18011] gi|332740205|gb|EGJ70687.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM 18011] Length = 363 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 98/307 (31%), Gaps = 68/307 (22%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + ++++S+N+ + + + + KN + +Y K +ADI+ +QE Sbjct: 95 PPQEAIKIISYNVMSFNGFKKEADGKN----------NILEYLKKSNADIICMQEYNVSK 144 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 +V ++ + D + AI + +++ Y Sbjct: 145 NKKQVTQQDVEKALSRYPYHNIQAVGDRGSGNKLAIYSKYPISNIVKIDY---------- 194 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP------------------- 179 ++ ++ V I+G K +++ H +S + Y Sbjct: 195 KSAYNGSIAYTVNIDGNKTLIINNHFESNKITMEDKVVYERILKMEDKTQIVKDTKGLVS 254 Query: 180 ----SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 + S+ +QA+ + + + L ++ GDFN N + Sbjct: 255 KIVEASSIRQKQAKKVDNVVK--ISKLPFIIVCGDFNDSPLCYTNR------LLEETLDN 306 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF--LIQESFSEILYNEDDIKSRGKRLS 293 F K + + ID ++ +N + ++ +S + S Sbjct: 307 AFVKSGKGLGISYNQNKFYFRIDNILISRNLKAYNCMVDKSIKD---------------S 351 Query: 294 DHCPISI 300 DH PI Sbjct: 352 DHYPIWC 358 >gi|281420679|ref|ZP_06251678.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella copri DSM 18205] gi|281405452|gb|EFB36132.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella copri DSM 18205] Length = 356 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 30/323 (9%), Positives = 74/323 (22%), Gaps = 59/323 (18%) Query: 26 LVSWNINTLSEQEGVSLWKN---------SVKRTTSDYTLLRQYAKNLDADI-------- 68 + +N L + + + + + T+ + + ++ D+ Sbjct: 38 VGFYNQENLFDTCHDAGKNDYEYLPAKGWNGMKYTNKLKNMSRALADMGTDVLPNVGCAF 97 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS- 127 + L E+ + N + + + + H + I A+ V Sbjct: 98 IGLSEVENANVLKDLTAQPPLK---ARNMQFCHIEGPDKRGIDCALLYNPALFTVKNTRL 154 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 P + S R + E+ G+ + V+ H S + + ++ Sbjct: 155 VPYVQELAKDSAYKTRGFFTVRGELAGEDVAVIVCHWPSRFSGPFYRESGARQTKVVKDS 214 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID------PNDSLIRFPKEK 241 L + + GD N + + + + Sbjct: 215 LLRLNPAMK--------VFVMGDMNDDPTDASMHKVLKAKAEISEVGADDMYNPWYNILA 266 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKF------------------------LIQESFSE 277 + D V+ N + + Sbjct: 267 KEGKGTLFYSGSWNLFDQIVITPNLLNRDSKNKDYSSLKFWKNHIFRRDYLIQQEGQYKG 326 Query: 278 ILYNEDDIKSRGKRLSDHCPISI 300 SDH P+ + Sbjct: 327 APLRTKAGGRWLNGYSDHLPVVM 349 >gi|322387486|ref|ZP_08061096.1| RgfB protein [Streptococcus infantis ATCC 700779] gi|321142015|gb|EFX37510.1| RgfB protein [Streptococcus infantis ATCC 700779] Length = 272 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 39/281 (13%), Positives = 74/281 (26%), Gaps = 54/281 (19%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS---------------- 94 + LL Q D++ QE+ +V + S Sbjct: 17 EEKFQLLLQDILENSYDLICFQEINQEITSTQVESGPLYNPLPSAEPIHQDHYVRLLVEK 76 Query: 95 ------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148 + H +++ K ++ L+ D + RR + Sbjct: 77 LSEKGLDYYWTWAYNHIGYDRYHEGVSILSKTPIKARE--ILVSDVDDPTDYHTRRVALV 134 Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208 + GK++ V +HL + E + + L P ++A Sbjct: 135 ETVVEGKELAVASVHLSWWDKGFQEEWARFEAV------LKELNK----------PLLLA 178 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263 GDFN G +D D+ + S + K IDY M Sbjct: 179 GDFNNPAGQEGYQAILSSPLDLQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFMT 238 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ ++SDH + + + Sbjct: 239 KDL---------QVEKLQVVFDGQASPQVSDHFGLQAELSW 270 >gi|303391389|ref|XP_003073924.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Encephalitozoon intestinalis ATCC 50506] gi|303303073|gb|ADM12564.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Encephalitozoon intestinalis ATCC 50506] Length = 492 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 78/310 (25%), Gaps = 45/310 (14%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + + ++NI + + + V + Q + DI+ LQE+ Y+ Sbjct: 169 GDTISVGTFNILSNVWAARSTYAPSWVINPEFRREGILQEIVLYNVDILCLQEIELYSFF 228 Query: 81 AKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKN---------------VRVL 124 + + S K ++ A+ + Sbjct: 229 DFYKEQLEMRCNYDSIIYPRGRIKNVADKKNVDGCAIFWRRSKFRLIAQFPIDFCQKITQ 288 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + + + A+ L+E NG+++ V++ H+ + Sbjct: 289 DTRFNINQELLDRYGKKDNIAIGALLERPNGQQVLVVNTHIFWDP----------DYSDV 338 Query: 184 LSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 Q L + + + ++ GDFN + +TID D Sbjct: 339 KLLQVILLIEEVRKISSRHPNACLLLQGDFNSLKSSSVYKSITTQTIDLADFRGTMHHLS 398 Query: 242 DSRC----------------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 N K IDY D + + Sbjct: 399 SQEFGEGLKLNDSYRNQDLGFTNFTPLFKDVIDYIFYDSKVTLTSVLAPVEDEYAENIAG 458 Query: 286 KSRGKRLSDH 295 SDH Sbjct: 459 LPNMHFPSDH 468 >gi|307706951|ref|ZP_07643750.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus mitis SK321] gi|307617665|gb|EFN96833.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus mitis SK321] Length = 271 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 38/281 (13%), Positives = 80/281 (28%), Gaps = 54/281 (19%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS---------------- 94 + LL + + D D++ QE+ +V + + + Sbjct: 17 EEKFQLLLEDILDKDYDLICFQEINQEITSPEVEVNDLYQALPAAEPIHQDHYVRLLVEK 76 Query: 95 ------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148 + H +A+ K ++ L+ D + RR Sbjct: 77 LSEQGKDYYWTWAYNHIGYDRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVAVA 134 Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208 ++GK++ V +HL + E + + L P ++A Sbjct: 135 ETVVDGKELAVASVHLSWWDKGFQEEWARFEAV------LKELNK----------PLLLA 178 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263 GDFN G + D+ ++ S + K IDY Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + ++G ++SDH ++ ++ Sbjct: 239 KEL---------EVENLHVVFDGNKGPQVSDHYGLNAILNW 270 >gi|68075767|ref|XP_679803.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56500627|emb|CAH99781.1| conserved hypothetical protein [Plasmodium berghei] Length = 958 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 45/399 (11%), Positives = 95/399 (23%), Gaps = 105/399 (26%) Query: 11 FFLVPCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 F + + + + +++WNI E + + + T + Q N DI Sbjct: 557 FKTLNSSNTSDNQFTVMTWNILAEIYGTSEAFAHCDPYMLSWSYRKTKIIQEILNYRPDI 616 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLI------NHSKRDSNNDIHTAIAVRKKNVR 122 + LQE+ + + + P + + + + K A+ + Sbjct: 617 ICLQEIQNEHFLEFFKPCLSQYEYQGVYKQKTKEIFTSPGKHKGGKYTIDGCAIFFNKKK 676 Query: 123 VLQQSYPLLGAKD---------SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 L A+ + + + +L H+++ DS Sbjct: 677 FKFVEIYALEFSKLIKEGSVISLPKEVQKNPALSKGLLKDNIALVLLLEHVENNKIYDSE 736 Query: 174 ENTYSPSCS--------------------------LLSQQAQWLKDWIT-------QKKE 200 + + + + Q Q L I QK E Sbjct: 737 KWEKNNNPRFENRKNKKKVVIVANTHIIANPEATYVKIWQTQILVKVIEYLKINFIQKYE 796 Query: 201 SLVPFVIAGDFNRKINYLGN------------------------NDDFWKTIDPNDSL-- 234 + +I GDFN N ++ + Sbjct: 797 IIPSIIICGDFNSTPNSAVYQLLYKKKCFPTHHDINSDEHGLLEYLPMSHNLNLKSAYAI 856 Query: 235 --------------------IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 +K N +DY + + + Sbjct: 857 SNFLSQTINTEESINNIIINNTIDLDKFEPPFTNYTSNFIGCLDYIFYNDEDLNIISTVN 916 Query: 275 FSEILYNEDDIKSRGK---------RLSDHCPISIDYDF 304 + + + R SDH P+ ++F Sbjct: 917 IPDENQLIQESQIYHLSSSALPSPIRSSDHFPLIAKFEF 955 >gi|115953191|ref|XP_784408.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115958815|ref|XP_001178780.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 1354 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 36/329 (10%), Positives = 89/329 (27%), Gaps = 43/329 (13%) Query: 19 SVAQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 + +R+ S+NI S LL + +ADI+ L Sbjct: 1023 TSPDCLRIFSYNILADMYADSDFSRDYLYPYCSPVALDIDYREQLLLKEISGYNADILCL 1082 Query: 72 QEMGSYNAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 QE G + P T + R + + + + Sbjct: 1083 QECGKKLYEYSLKPALTDQGYKGLLICKTRQTPEGEALFYREDRFRLLEQYDISLAEAFQ 1142 Query: 128 YPLLGAKDSFSRAGNRRAVELLV------------EINGKKIWVLDIHLKSFCFLDSLEN 175 + + + + + ++ + + + + + + + Sbjct: 1143 KESSNSDLIEAVSKSPAMLNQVLTRSSVLQVAVLEDCHDPRRRICVANTHLYFHPRAGHI 1202 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 + ++L + + + + + + ++ GD N + G + K P +++ Sbjct: 1203 RLIQTITILRHLQKIQQQHLEKNPDIKLAMILCGDLNSAPSCPGVYELLSKKHIPENNVQ 1262 Query: 236 RFPKEKDSRC-------------------NANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 + K+ C N +DY ++D N + + + Sbjct: 1263 WYCGGKEEFCGGMTLSHSVDFTNACTSQEYTNFVAGFVASLDYVLIDSNHLEVIREIPMP 1322 Query: 277 EILYNE-DDIKSRGKRLSDHCPISIDYDF 304 + SDH I D + Sbjct: 1323 DHDDVIAHVALPNEVFPSDHLAIGCDVRW 1351 >gi|319442381|ref|ZP_07991537.1| exodeoxyribonuclease III [Corynebacterium variabile DSM 44702] Length = 259 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 37/297 (12%), Positives = 76/297 (25%), Gaps = 65/297 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WNIN + +R + D D++ LQE +A Sbjct: 1 MRVATWNIN----------------SVRTREARVRDFLSRSDVDVLCLQETKCTDA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + +AV + + D A Sbjct: 41 --------QFPDFSDTGYEQAHHGLGSFNGVAVLSRVGIDEVTTDFGQPGFDKDPAAPQE 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + + V +++ + + TY +L + ++ Sbjct: 93 QEARA-LGVTCGGVRVWSLYVPNGREISDRHYTYK---------LDFLDALASYAEQEHR 142 Query: 204 PFVIAGDFNRKINYLGNNDDFW-----------KTIDPNDSLIRFPKEKDSRCNANKNLR 252 P V+ GDFN D + + + + + Sbjct: 143 PTVVTGDFNITPTDDDVWDPSFFVGKTHVTPRERDALRHLEDAGLTEATATLHGRYSYWD 202 Query: 253 NKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID + D + RGK SDH P+ + Sbjct: 203 YQAMRFQRGQGIRIDLQYCRG-------ITPADDPEPWVDVDERRGKGASDHAPVIV 252 >gi|224532103|ref|ZP_03672735.1| exodeoxyribonuclease III [Borrelia valaisiana VS116] gi|224511568|gb|EEF81974.1| exodeoxyribonuclease III [Borrelia valaisiana VS116] Length = 255 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 33/303 (10%), Positives = 80/303 (26%), Gaps = 77/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAVAK 82 ++L+SWN+N + ++ K DI+ +QE + + K Sbjct: 1 MKLISWNVNGIRAVLKKGF---------------LEFVKEYAPDILCVQETKALREQLPK 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + ++S ++ +S + + + Sbjct: 46 DLILENYYSYFSKSKIKGYSGVCIYSK---------------VEPIAVNFLGKEIFDNEG 90 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + +++ + + ++++ I Sbjct: 91 RGIIA-----YYDDFVLINGYFPN-------SQALRRRLVYKLDFLSYIENLIDSLVNGG 138 Query: 203 VPFVIAGDFNRKINYLG--------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 VI GDFN + + W N + + + Sbjct: 139 KNVVICGDFNIAHTEIDLISPDSNRDSPGYYIEETTWIDNFLNKGYVDTFRIFNKEPGYY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYFV+++ + + + + + SDHCP+ Sbjct: 199 TWWNYRTGAREKNMGWRIDYFVVNEFFKRNVKKSLILDKV-----------MGSDHCPVF 247 Query: 300 IDY 302 ++ Sbjct: 248 LEL 250 >gi|86135128|ref|ZP_01053710.1| exodeoxyribonuclease III (Xth) [Polaribacter sp. MED152] gi|85821991|gb|EAQ43138.1| exodeoxyribonuclease III (Xth) [Polaribacter sp. MED152] Length = 253 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 33/302 (10%), Positives = 91/302 (30%), Gaps = 72/302 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+N+N + + K + D++ +QE ++ + Sbjct: 1 MKIISYNVNGIRAALKKGF---------------SDWLKAANPDVICIQETKAHKEQLDL 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + H + ++++A+ K + ++ G R Sbjct: 46 -------SLFEDAGYPYHYWFSAQKKGYSSVAILCK----EKPNHIEYGTGIESMDFEGR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ + ++ ++L S + +++IT ++ + Sbjct: 95 N-----LRVDFDDVSIMSLYLPSGT--------NALRLDYKFNYMDEFQEYITNLRKEIP 141 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP-------------NDSLIRFPKEKDSRCNANKN 250 VI GD+N + ++ K + N I + + Sbjct: 142 NLVICGDYNICHEEIDIHNPKMKGVSGFLPEERTWIGNFINSGFIDSFRYLNKELQQYSW 201 Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + +DY ++ + + + + SDHCPI+++ Sbjct: 202 WSYRANARANNKGWRLDYAMVSEPLKDKISRA-----------YILPEAKHSDHCPIALE 250 Query: 302 YD 303 D Sbjct: 251 LD 252 >gi|239832679|ref|ZP_04681008.1| endonuclease/exonuclease/phosphatase [Ochrobactrum intermedium LMG 3301] gi|239824946|gb|EEQ96514.1| endonuclease/exonuclease/phosphatase [Ochrobactrum intermedium LMG 3301] Length = 285 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 29/278 (10%), Positives = 64/278 (23%), Gaps = 51/278 (18%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + S+N++ + + +DAD++ LQE Sbjct: 38 IASYNVHKCIGIDKQFNP-----------QRTAEVISEIDADVIALQEADRRFGERSGLL 86 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + + + V L R A Sbjct: 87 DLGLLERRHGLVPVPITATMPKGHGWHGNVLLFREGVVRNVQQLKLPG------VEPRGA 140 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + ++ + V+ HL QQA+ + + + +P Sbjct: 141 LVADLQFPAGPLRVIAAHLGLLK-------------RSREQQAESILTVLQ--EADTLPT 185 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 ++ GD N ++ ++ +D + Sbjct: 186 LLIGDLN-------EWRVGKRSSLAALMPTFNHVATAVPSFPSRFPVF--ALDRVL---- 232 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + E + SDH P+ D Sbjct: 233 ------GAPHNLVTSVEVHNTPLARLASDHLPVKAHLD 264 >gi|255530372|ref|YP_003090744.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] gi|255343356|gb|ACU02682.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] Length = 303 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 82/297 (27%), Gaps = 40/297 (13%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-- 74 A A K ++++ NI + + + + DI+ +QE+ Sbjct: 32 PAIAAGKHKMLTCNIR-----VDLPEDEQAGFGWNGRKEICAAIMLQQKPDIICMQEVLR 86 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ-----QSYP 129 + K + + + + + K+ + P Sbjct: 87 NQNEDLKKALKG-YFSFGFEGPEMDAFTTGYHGIAKNPIFFSEKRYELLSAGGYWLSETP 145 Query: 130 LLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 L+ S+ A R A + ++ +GK V+++HL +Q Sbjct: 146 LMAGSLSWDSARARNANWVRLKDRQSGKDFRVVNLHLDHKSQP------------AREKQ 193 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSR 244 + + Q P ++AGDFN WK I P + Sbjct: 194 MEMVLADAAQY-PRDYPQLLAGDFNASAENKVYELVISAKWKDIYTTLHGEAEPGYTVHQ 252 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + ID+ + +GK SDH +S + Sbjct: 253 FQGENYSKKGKKIDFIFCKGE---------VTAQSAGILKDNVKGKYPSDHYFVSAE 300 >gi|117644396|emb|CAL37693.1| hypothetical protein [synthetic construct] gi|261859534|dbj|BAI46289.1| deoxyribonuclease I-like 1 [synthetic construct] Length = 302 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 72/301 (23%), Gaps = 40/301 (13%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 AL+F ++ AQ R+ ++N L+ + L + D Sbjct: 6 ALLFLILAN---GAQAFRICAFNAQRLTL---------AKVAREQVMDTLVRILARC--D 51 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVL 124 I+ LQE+ + A F + S + R +VL Sbjct: 52 IMVLQEVVDSSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVL 111 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSC 181 + R + + ++ +H L Y Sbjct: 112 SSYVY-----NDEDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFL 166 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + ++ GDFN L + + Sbjct: 167 EVSQHW-------------QSKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADG 213 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + + + + L + + + + +SDH P+ ++ Sbjct: 214 EDTTVRASTHCTYDRV--VLHGERCRSLLHTAAAFDFPTSFQLTEEEALNISDHYPVEVE 271 Query: 302 Y 302 Sbjct: 272 L 272 >gi|54696840|gb|AAV38792.1| deoxyribonuclease I-like 1 [synthetic construct] gi|61365622|gb|AAX42737.1| deoxyribonuclease I-like 1 [synthetic construct] Length = 303 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 72/301 (23%), Gaps = 40/301 (13%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 AL+F ++ AQ R+ ++N L+ + L + D Sbjct: 6 ALLFLILAN---GAQAFRICAFNAQRLTL---------AKVAREQVMDTLVRILARC--D 51 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVL 124 I+ LQE+ + A F + S + R +VL Sbjct: 52 IMVLQEVVDSSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVL 111 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSC 181 + R + + ++ +H L Y Sbjct: 112 SSYVY-----NDEDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFL 166 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + ++ GDFN L + + Sbjct: 167 EVSQHW-------------QSKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADG 213 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + + + + L + + + + +SDH P+ ++ Sbjct: 214 EDTTVRASTHCTYDRV--VLHGERCRSLLHTAAAFDFPTSFQLTEEEALNISDHYPVEVE 271 Query: 302 Y 302 Sbjct: 272 L 272 >gi|296128411|ref|YP_003635661.1| exodeoxyribonuclease III Xth [Cellulomonas flavigena DSM 20109] gi|296020226|gb|ADG73462.1| exodeoxyribonuclease III Xth [Cellulomonas flavigena DSM 20109] Length = 264 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 31/303 (10%), Positives = 72/303 (23%), Gaps = 70/303 (23%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L +WNIN + + + D++ LQE + FP Sbjct: 3 LATWNIN----------------SIRARVDRAVAFLERTGVDVLALQE---TKVKDEAFP 43 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + +S +A+ + + RA Sbjct: 44 REPFEALGYEVATHGYS-------QWNGVAIVSRVGLTDVERGFPGQPTWGDPGVAEARA 96 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KESLV 203 + + V +++ + ++ TY L+D + Sbjct: 97 LGATC----GGVRVWSLYVPNGREIEDPHYTYKLD------WLGALRDAAEGWLTADPRA 146 Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + GD+N + ++ + + + + Sbjct: 147 QVALVGDWNIAPLDTDVWDIARFAGRTHVTPAERQAFEAL-AHAGYSEVSRVHVPAEHTY 205 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID + + +GK+ SDH P+ Sbjct: 206 TYWDYQQLRFPRNEGMRIDLTYASPTLA-------ARVTGVRIERDERKGKQPSDHVPVV 258 Query: 300 IDY 302 ++ Sbjct: 259 LEI 261 >gi|229009858|ref|ZP_04167078.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048] gi|228751476|gb|EEM01282.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048] Length = 263 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 74/269 (27%), Gaps = 41/269 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS--------- 102 L + + D D++ LQE+ V F + Sbjct: 18 EKIKYLAKAIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELRALNVKEYNII 77 Query: 103 ---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + +A+ K+ V + ++ + KD+ R+ V + N K I Sbjct: 78 WDFSHIGYDVYEEGLAIITKHNIVKEDTFFVSENKDTTYWK-TRKIVSATIAYNDKNITF 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 H ++ Q L + + S + GDFN G Sbjct: 137 YSCHFGW----------WNDEEESFKDQVDRLMERVN----SNELSFLMGDFNNNARLEG 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274 ++ D+ ++ + + ID + +Q+ + Sbjct: 183 EGYEYTMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKQNLRIDLILSNQSKTVNSSKVI 242 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 F+ N +SDH + + D Sbjct: 243 FNGTNRNV---------ISDHFGVEVQLD 262 >gi|330469350|ref|YP_004407093.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris AB-18-032] gi|328812321|gb|AEB46493.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris AB-18-032] Length = 236 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 41/281 (14%), Positives = 81/281 (28%), Gaps = 60/281 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+VS+N++ D L + L D++ +QE + Sbjct: 9 PLRVVSYNVHG----------------QRDDVAALATVVRQLAPDVLIVQE-----GPRR 47 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + ++ L+ + +++R + V Q +PL + Sbjct: 48 FGWRAKSATLAASFGLVVAAGGLPALGNLLLVSLRVRVTGVRHQRFPLTPGRHM------ 101 Query: 143 RRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R A + G + V HL + QA+ K + + Sbjct: 102 RGAAYADCVVGGPARFTVAGSHL-------------ATDPVERPDQAKLFKRELDV---A 145 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 +P + A D N + + + + + ID Sbjct: 146 PLPVIAAADLNEEPDGPAW------CTVAHGLTDAAVAADRADRLTYSCADPRRRIDGVF 199 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + + Y+ D +R SDH PI +D Sbjct: 200 VDPR---------ITVVDYDVLDTP-LSRRASDHFPIVVDL 230 >gi|5803007|ref|NP_006721.1| deoxyribonuclease-1-like 1 precursor [Homo sapiens] gi|58430942|ref|NP_001009932.1| deoxyribonuclease-1-like 1 precursor [Homo sapiens] gi|58430944|ref|NP_001009933.1| deoxyribonuclease-1-like 1 precursor [Homo sapiens] gi|58430946|ref|NP_001009934.1| deoxyribonuclease-1-like 1 precursor [Homo sapiens] gi|1352319|sp|P49184|DNSL1_HUMAN RecName: Full=Deoxyribonuclease-1-like 1; AltName: Full=DNase X; AltName: Full=Deoxyribonuclease I-like 1; Short=DNase I-like 1; AltName: Full=Muscle-specific DNase I-like; AltName: Full=XIB; Flags: Precursor gi|929628|emb|CAA62037.1| DNase protein [Homo sapiens] gi|1620214|gb|AAB17022.1| XIB [Homo sapiens] gi|16306751|gb|AAH01561.1| Deoxyribonuclease I-like 1 [Homo sapiens] gi|24081084|gb|AAH28092.1| Deoxyribonuclease I-like 1 [Homo sapiens] gi|57284183|emb|CAI43204.1| deoxyribonuclease I-like 1 [Homo sapiens] gi|119593137|gb|EAW72731.1| deoxyribonuclease I-like 1, isoform CRA_a [Homo sapiens] gi|119593138|gb|EAW72732.1| deoxyribonuclease I-like 1, isoform CRA_a [Homo sapiens] gi|119593139|gb|EAW72733.1| deoxyribonuclease I-like 1, isoform CRA_a [Homo sapiens] gi|119593140|gb|EAW72734.1| deoxyribonuclease I-like 1, isoform CRA_a [Homo sapiens] gi|119593141|gb|EAW72735.1| deoxyribonuclease I-like 1, isoform CRA_a [Homo sapiens] gi|123981556|gb|ABM82607.1| deoxyribonuclease I-like 1 [synthetic construct] gi|123996381|gb|ABM85792.1| deoxyribonuclease I-like 1 [synthetic construct] Length = 302 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 72/301 (23%), Gaps = 40/301 (13%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 AL+F ++ AQ R+ ++N L+ + L + D Sbjct: 6 ALLFLILAN---GAQAFRICAFNAQRLTL---------AKVAREQVMDTLVRILARC--D 51 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVL 124 I+ LQE+ + A F + S + R +VL Sbjct: 52 IMVLQEVVDSSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVL 111 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSC 181 + R + + ++ +H L Y Sbjct: 112 SSYVY-----NDEDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFL 166 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + ++ GDFN L + + Sbjct: 167 EVSQHW-------------QSKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADG 213 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + + + + L + + + + +SDH P+ ++ Sbjct: 214 EDTTVRASTHCTYDRV--VLHGERCRSLLHTAAAFDFPTSFQLTEEEALNISDHYPVEVE 271 Query: 302 Y 302 Sbjct: 272 L 272 >gi|315612842|ref|ZP_07887753.1| RgfB protein [Streptococcus sanguinis ATCC 49296] gi|315314952|gb|EFU62993.1| RgfB protein [Streptococcus sanguinis ATCC 49296] Length = 271 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 38/281 (13%), Positives = 74/281 (26%), Gaps = 54/281 (19%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95 + +L Q + D D++ QE+ +V N + S Sbjct: 17 EEKFQILLQDILDKDYDLICFQEINQEMTSPEVEANNHYQALPSAEPIHQDHYVRLLVEK 76 Query: 96 -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148 + H +A+ K ++ L+ D + RR Sbjct: 77 LAEKGKNYYWTWAYNHIGYDRYHEGVAILSKTPIKARE--ILVSDVDDPTDYHTRRVALA 134 Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208 E+ GK++ + +HL + + + + L P ++A Sbjct: 135 ETEVEGKELALASVHLSWWDKG------FQEEWARFEVVLKDLNK----------PLILA 178 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263 GDFN G + D+ + S + K IDY Sbjct: 179 GDFNNPAGQEGYQAILASQLGLQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + ++SDH ++ + Sbjct: 239 KEL---------EVESLQVVFDGQNSPQVSDHYGLNAVLTW 270 >gi|307180961|gb|EFN68749.1| 2',5'-phosphodiesterase 12 [Camponotus floridanus] Length = 565 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 41/320 (12%), Positives = 80/320 (25%), Gaps = 38/320 (11%) Query: 21 AQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + R++S+NI S+ L+ + ++DI+ LQE Sbjct: 242 GRSFRIMSYNILADTYADSDFSKDVLYPYCPQYALDMDYRKQLILKEIIGFNSDIICLQE 301 Query: 74 MGSYNAVAKVFP---KNTWCIFYSTERLINHSKRDSNNDIHT----------AIAVRKKN 120 + + P + + T+ IN N A + Sbjct: 302 VDRSVYEHDLLPSLYMLNYDGVFITKNEINEGLATFFNQERFEKLRFEYSVIAKNIDFPR 361 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + K+ F V L + ++ + + D+ Sbjct: 362 FTTIWSKINNNKTKERFCSRNTTIQVTTLRSKENQSEILIIGNTHLYFKPDADHIRLLQG 421 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI----------NYLGNNDDFWKTIDP 230 ++ + K + E V ++ GDFN NY+ + W++ Sbjct: 422 YYTITYVHEIAKKIQEENPECNVSVLLCGDFNSVPECGIYQLMTKNYVPETCEDWRSNTD 481 Query: 231 N-------DSLIRFPKEKDSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNE 282 + + N +DY I S+ Sbjct: 482 EAIENVSLTQDLCMSSACGTPQYTNYTPEFSGCLDYIFYEKDKFEVEQIIPMPSKEELTL 541 Query: 283 DDIKSRGKRLSDHCPISIDY 302 SDH + D Sbjct: 542 HTGLPSVVFPSDHISLCADL 561 >gi|111115360|ref|YP_709978.1| exodeoxyribonuclease III [Borrelia afzelii PKo] gi|216263647|ref|ZP_03435642.1| exodeoxyribonuclease III [Borrelia afzelii ACA-1] gi|110890634|gb|ABH01802.1| exodeoxyribonuclease III [Borrelia afzelii PKo] gi|215980491|gb|EEC21312.1| exodeoxyribonuclease III [Borrelia afzelii ACA-1] Length = 255 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 29/304 (9%), Positives = 82/304 (26%), Gaps = 77/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAVAK 82 ++L+SWN+N + ++ + DI+ +QE + + + Sbjct: 1 MKLISWNVNGIRAVLKKGF---------------LEFVREYTPDILCVQETKALKEQLPR 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + ++S ++ +S + + + Sbjct: 46 DLILENYYSYFSKSKIKGYSGVCIYSK---------------VKPIAVNLLGKEIFDNEG 90 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + + +++ + + ++++ I Sbjct: 91 RGLIA-----HYEDFVLINGYFPN-------SQALRRRLVYKLDFLSYVENLIDSFVNDG 138 Query: 203 VPFVIAGDFNRKINYLG--------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I GDFN + + W N + + + Sbjct: 139 KNIIICGDFNIAHTEIDLISPDSNRDSPGYYIEETTWLDSFLNKGYVDTFRIFNKEPGYY 198 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++++ + + + + + SDHCP+ Sbjct: 199 TWWSYRTRAREKNIGWRIDYFIVNEFFKRNVKKSLILDKV-----------MGSDHCPVF 247 Query: 300 IDYD 303 ++ Sbjct: 248 LELT 251 >gi|326497739|dbj|BAK05959.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 524 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 31/302 (10%), Positives = 74/302 (24%), Gaps = 55/302 (18%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NA 79 + ++++++N+ E ++ L ++ + D++ QE+ Sbjct: 255 KTIKVMTYNV-WFREDLELT----------KRMHALGNLIQHHNPDLICFQEVTPNIYQL 303 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + K + S + K P + Sbjct: 304 LQKSGWWQEYKCSLSARMAMQRQYY---------CMQMSKLPVNSFNCIPFSNS------ 348 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + I G VL + L+S QA + + + Sbjct: 349 VMERELCVGDINIGGVTKMVL-----ATSHLESPCAWNQMYSKERVVQANASMRILDKFR 403 Query: 200 ESLVPFVIAGDFNRKINYLG----NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + GD N G N + + + + N + + Sbjct: 404 N----VIFCGDMNWDDKGDGPFPLPNGWIDAWAELKPGEDGWTYDTRANGMLAGNRKLQK 459 Query: 256 PIDYF-------------VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D F ++ + A + + + SDH + + Sbjct: 460 RLDRFVCKLPDFEIDSIEMIGKEAIPGI-SHYKEKTVRKVVQNIEYPVLPSDHFGLVLSI 518 Query: 303 DF 304 + Sbjct: 519 TY 520 >gi|302696131|ref|XP_003037744.1| hypothetical protein SCHCODRAFT_46538 [Schizophyllum commune H4-8] gi|300111441|gb|EFJ02842.1| hypothetical protein SCHCODRAFT_46538 [Schizophyllum commune H4-8] Length = 442 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 39/313 (12%), Positives = 91/313 (29%), Gaps = 38/313 (12%) Query: 6 VLALVFF-LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 +LA+ V ++ + ++S N+ L + + T++ L+ Q + Sbjct: 8 LLAISLVRSVVAASAASGTFNILSMNVAGLPAILNGNGEEGDK---TTNTNLIGQNMAKI 64 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 D++ +QE +Y+A + + S +N R K Sbjct: 65 GYDLIHVQEDFNYHAALYAADTHPYRTATSGGVPFGSGLNTLSNSDWVDF-SRTKWATCS 123 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 S F+ R G I +++H + + + Sbjct: 124 DASESDCLTPKGFTFMRWRV-------DEGVYIDAINLHADAGTEDEDNVARSAN----- 171 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 ++D+I + ++ GD N + + + + K Sbjct: 172 ---LDQVRDFIAAN-SAGNAVLVFGDTNSRYTRA-VDTGIRDLVADEGMTDAWVKHARGG 226 Query: 245 CNA------------NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK-SRGKR 291 + +D + L+ ++ Y+ D G Sbjct: 227 SPPEGGADALLCPDGVPANISCETVDKVFFRGS---KLLDLQSTDFFYDTDRFLSENGTL 283 Query: 292 LSDHCPISIDYDF 304 L+DH P+ +++ + Sbjct: 284 LTDHNPVRVEFSW 296 >gi|326929306|ref|XP_003210808.1| PREDICTED: deoxyribonuclease-1-like [Meleagris gallopavo] Length = 284 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 36/283 (12%), Positives = 76/283 (26%), Gaps = 32/283 (11%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAK 82 + ++NI T +S + + DI +QE+ + Sbjct: 25 ISAFNIRTFG---------DSKMSNQTIADFIVSILVEY--DITLVQEVRDADLSSVNKL 73 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + N + + R+S + + R V VL+ Y G + + + Sbjct: 74 ISQLNRASSYPYSFLSSIPLGRNSYKEQYV-FIYRSDIVSVLESYYYDDGCESCGTDIFS 132 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + ++ I ++ + +S A D + + Sbjct: 133 REPFIVKFSSPTTQVDEFVIVPLHAEPSNAP--------AEISALADVYTDVTDKWATNN 184 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 GDFN +Y+ + S + + + D V Sbjct: 185 --IFFMGDFNADCSYVTAEQWPSIRLRSLSSCEWLIPDSADTTVTSTDCAY----DRIVA 238 Query: 263 -DQNAYKFLIQESFSEILYNE--DDIKSRGKRLSDHCPISIDY 302 + + S + E +SDH P+ + Sbjct: 239 CGSALRQAVEYGSAKVNNFQETLHIQNKDALAISDHFPVEVTL 281 >gi|288926600|ref|ZP_06420516.1| endonuclease/Exonuclease/phosphatase [Prevotella buccae D17] gi|288336622|gb|EFC74992.1| endonuclease/Exonuclease/phosphatase [Prevotella buccae D17] Length = 312 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 29/308 (9%), Positives = 81/308 (26%), Gaps = 46/308 (14%) Query: 30 NINTLSEQEGVSLWKNS-----------VKRTTSDYTLLRQYAKNLD--------ADIVF 70 N L + SL ++ R + + L D+V Sbjct: 16 NCENLFDTRHDSLKNDTEFLPEGSHHWTRTRYWHKLNDIGREIIALGDDSAGWRLPDVVA 75 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 + E+ + + + + ++ + + S ++ +A+ V S+ Sbjct: 76 MCEVENDSVMYDLTKRSLLRKARYEYLMTD-----SPDERGIDVALMYNPVTFRPLSHHA 130 Query: 131 LGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + R + + + + + +H S + + A Sbjct: 131 IRIPLLPDMRPTRDILYVAGLVGEADTLHLFVVHAPSRMGGERASRPFRLQVVRRLITAI 190 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + ++AGDFN + + + I ++ + + + Sbjct: 191 DSIRLLQ----PDAQIILAGDFNDYADSPALDSLY---IHDMHNVSATARGANGARGTYR 243 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILY--------------NEDDIKSRGKRLSDH 295 +D + + L+ ++ + + SDH Sbjct: 244 FRGEWGSLDQIICSLSVAGKLVDCRIGDLPFLLEEDEKYGGVHPRRTYLGPKYQRGFSDH 303 Query: 296 CPISIDYD 303 P+ ++ Sbjct: 304 LPLVARFN 311 >gi|242005512|ref|XP_002423609.1| CCR4-NOT transcription complex subunit, putative [Pediculus humanus corporis] gi|212506757|gb|EEB10871.1| CCR4-NOT transcription complex subunit, putative [Pediculus humanus corporis] Length = 559 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 37/328 (11%), Positives = 87/328 (26%), Gaps = 40/328 (12%) Query: 17 TASVAQKVRLVSWNINTL-------SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 + + +K+R+V +NI ++ + + + LL ++DI+ Sbjct: 230 SETKPEKIRVVCYNILADTYTNTKEAKNSIFAYCNSDALDLENRKRLLLTELTGYNSDII 289 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYS------------TERLINHSKRDSNNDIH-TAIAV 116 LQE+ P + F S ++ + A+ + Sbjct: 290 CLQEVDKKLYDTVFLPFCNFKNFNSVYNKKEGFREGCAMFYKKSKFEFIDHVQYLYAVEL 349 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI--WVLDIHLKSFCFLDSLE 174 + + + K + ++++V + +++ + + D+ Sbjct: 350 KNNKIFKNLKEIIYNNNKLVTRLNSLQTLLQVVVLKSLTSANDYLVVGNTHLYFHPDADH 409 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN------------YLGNND 222 + + + V + GDFN + D Sbjct: 410 IRLLQGIMGFDLLNNTANELKRKLPDINVSIIFCGDFNSTPDCGVYKYITEGYIEGSEID 469 Query: 223 DFWKTIDPNDSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 + D K + N K +DY N + F Sbjct: 470 WKSNLEEAVDGYSANHSVKMISACGTPEFTNYTKGFKACLDYIYFQNNRLELESFVPFPS 529 Query: 278 I-LYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + SDH + D + Sbjct: 530 LDDLSREVALPSTFFPSDHVALIADLKW 557 >gi|198420194|ref|XP_002123983.1| PREDICTED: similar to APEX nuclease (multifunctional DNA repair enzyme) 1 [Ciona intestinalis] Length = 337 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 33/301 (10%), Positives = 71/301 (23%), Gaps = 74/301 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+ + ++ K DI LQE Sbjct: 82 LKISSWNVAGVRAWVKKDG---------------VKWVKGESPDIFTLQETKCSE----- 121 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 K+ + + + + + K + + + D R Sbjct: 122 --KDIPQELKDLKEYHMSWNVAKSTKGFSGVGLFSKVKPLEVKFGIGVEEHDQEGR---- 175 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + K +++ ++ + S + L + Sbjct: 176 -----TITAEYDKFYLVSTYVPNAQRGLKRLEYRLKWNSDFLAYIKSL--------DEKK 222 Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 P V+ GD N + + D + + + Sbjct: 223 PVVLCGDMNVSHHEIDLANPKGNKKNAGFSQEERDGMTELLQSGFTDTYRDLYPDLTGQY 282 Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 +DYF++ + D+I SDHCPI+ Sbjct: 283 TFWTYMGNCRAKNVGWRLDYFILSNKWKDNVC-----------DNIIETSAMGSDHCPIT 331 Query: 300 I 300 + Sbjct: 332 L 332 >gi|160871859|ref|ZP_02061991.1| exodeoxyribonuclease III [Rickettsiella grylli] gi|159120658|gb|EDP45996.1| exodeoxyribonuclease III [Rickettsiella grylli] Length = 254 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 38/307 (12%), Positives = 93/307 (30%), Gaps = 79/307 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-AVAK 82 +R++S N+N + + ++ K+ DAD+V LQE + + Sbjct: 1 MRIISLNVNGIRSAARKGFF---------------EWLKHQDADVVCLQETKAQKHQLND 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + ++ + + +A+ + G + + Sbjct: 46 SVFIQGYEAYFFDAEKKGY----------SGVAIYSRLKPNNVT----TGLGWACADKEG 91 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R ++++ ++ + +++ S +S + L Q + ++++ Sbjct: 92 RY-----IQLHFSQLSIASLYMPSGSSGESRQ-------RLKFQFLDSYLPILKKQRQQA 139 Query: 203 VPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 F+I GD+N + + P + F + Sbjct: 140 GDFIICGDWNIAHKPIDLKNWRCNQKNSGFLPQERAWLTQVLGPIGYVDAFRALNPQP-D 198 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 ++ IDY ++ + + + +R SDH P Sbjct: 199 HYTWWSHRGRAWENNVGWRIDYQIVSKEIKNKIKSAMI-----------YKDQRFSDHAP 247 Query: 298 ISIDYDF 304 + IDY+F Sbjct: 248 LIIDYNF 254 >gi|61355637|gb|AAX41160.1| deoxyribonuclease I-like 1 [synthetic construct] Length = 302 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 72/301 (23%), Gaps = 40/301 (13%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 AL+F ++ AQ R+ ++N L+ + L + D Sbjct: 6 ALLFLILAN---GAQAFRICAFNAQRLTL---------AKVAREQVMDTLVRILARC--D 51 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVL 124 I+ LQE+ + A F + S + R +VL Sbjct: 52 IMVLQEVVDSSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVL 111 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSC 181 + R + + ++ +H L Y Sbjct: 112 SSYVY-----NDEDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFL 166 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + ++ GDFN L + + Sbjct: 167 EVSQHW-------------QSKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADG 213 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + + + + L + + + + +SDH P+ ++ Sbjct: 214 EDTTVLASTHCTYDRV--VLHGERCRSLLHTAAAFDFPTSFQLTEEEALNISDHYPVEVE 271 Query: 302 Y 302 Sbjct: 272 L 272 >gi|223932635|ref|ZP_03624635.1| Endonuclease/exonuclease/phosphatase [Streptococcus suis 89/1591] gi|330832220|ref|YP_004401045.1| endonuclease/exonuclease/phosphatase [Streptococcus suis ST3] gi|223898745|gb|EEF65106.1| Endonuclease/exonuclease/phosphatase [Streptococcus suis 89/1591] gi|329306443|gb|AEB80859.1| Endonuclease/exonuclease/phosphatase [Streptococcus suis ST3] Length = 263 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 33/298 (11%), Positives = 81/298 (27%), Gaps = 54/298 (18%) Query: 24 VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNA 79 ++L++ N++ L +R +L + D++ LQE+ + + Sbjct: 1 MKLLTINVHAWL------------EERQDEKLDVLAKTIAEKAYDVIALQEVNQLITADL 48 Query: 80 VAKVFPKNTWCIFY---------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 V K + + + + + IA K + Sbjct: 49 VTKDLKADNYGLILLEKLRALGQFDYSYYWSNSHIGYDKYEEGIAFLTKLPVYEVDPF-Y 107 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 S +R+ + L V + I + H+ + + + + Sbjct: 108 CSQNKSVDSILSRKIMGLTVFYQDQLIDLYSCHINLPGSEEEDQLDNVRTIVERT----- 162 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC----- 245 + ++ GDFN + + DS ++ Sbjct: 163 ---------GNRRFKILMGDFNTDAFSDREAYEAITELGLYDSYNLAMEKDQGITVEKAI 213 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +DY ++Q F+ +SDH + ++ + Sbjct: 214 DGWAGHSQEKRLDYIFLNQKKEVLSSLVIFNGENRPI---------ISDHFGVEVEIN 262 >gi|227532810|ref|ZP_03962859.1| endonuclease/exonuclease/phosphatase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239630649|ref|ZP_04673680.1| metal-dependent hydrolase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|227189551|gb|EEI69618.1| endonuclease/exonuclease/phosphatase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239526932|gb|EEQ65933.1| metal-dependent hydrolase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 355 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 44/324 (13%), Positives = 89/324 (27%), Gaps = 65/324 (20%) Query: 21 AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 Q +++NI G S K + + + + + D+ F Q Sbjct: 52 GQTYTAMTYNIGYGSYPPSYSFFMDGGKYSRAYSKKSVRTSINGVIKTTQAQNPDVAFYQ 111 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTER-----------LINHSKRDSNNDIHTAIAVRKKNV 121 E+ ++ + + + + + I K Sbjct: 112 EIDPDGDRSQHVNEVKMVTGAQQQYANIYGQNYDSAYLFYPFTQPIGKAKSGILTLSKAK 171 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP 179 + Y L D RA NGK+ +++IH+ +F Sbjct: 172 VDSSRRYSLPVDTDFNKIIDLDRAFTATKTTVANGKQFVMVNIHMSAFTPN--------- 222 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + Q L +I Q + ++AGD+N ++ K +D + + Sbjct: 223 -VKIQQAQFTKLFKYIEQAYQQGNYVMVAGDYNHRLLKNTAEIFHTKDLDETWTHLFPKS 281 Query: 240 EKDSRCN--------------------ANKNLRNKIPID-YFVMDQNAYKFLIQESFSEI 278 + + + ID Y + N + ES + Sbjct: 282 KLPAGFHIPTMGLAKAAVPSVRALDQPYQPGKSFVTLIDGYIL-SPN----IKAESVHVV 336 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 G + SDH P+ + + Sbjct: 337 ST--------GFQYSDHNPVVLKF 352 >gi|253698977|ref|YP_003020166.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M21] gi|251773827|gb|ACT16408.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M21] Length = 343 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 34/293 (11%), Positives = 80/293 (27%), Gaps = 56/293 (19%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +R+++WNI D L + + DIV Q+ Sbjct: 91 SGTPLRVMTWNIKY----------------GKHDLMPLVEELERSRPDIVLFQDAVR--- 131 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDI