RPSBLAST alignment of GI: 254781003 and protein with PDBid: 2ei9

>2ei9_A Non-LTR retrotransposon R1BMKS ORF2 protein; four layered alpha beta sandwich, gene regulation; 2.00A {Bombyx mori} Length = 240
 Score = 38.4 bits (88), Expect = 0.002
 Identities = 27/280 (9%), Positives = 61/280 (21%), Gaps = 69/280 (24%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++R+   N+                         L   A++L  DIV +QE        
Sbjct: 6   PRLRIGQINLGGAE----------------DATRELPSIARDLGLDIVLVQE-------- 41

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  + +     +   H K          + +R + +                    
Sbjct: 42  ------QYSMVGFLAQCGAHPK--------AGVYIRNRVLPCAVL-----------HHLS 76

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +      +V I G  ++++  + +    +D   +        L      +          
Sbjct: 77  STHIT--VVHIGGWDLYMVSAYFQYSDPIDPYLHRLGNILDRLRGARVVICADTNAHSPL 134

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
                     +         D   K  D   +        D           +  +D  +
Sbjct: 135 WHSL----PRHYVGRGQEVADRRAKMEDFIGARRLVVHNADGHLPTFSTANGESYVDVTL 190

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             +                   + +   +  SDH  I   
Sbjct: 191 STRGV--------------RVSEWRVTNESSSDHRLIVFG 216