RPSBLAST alignment of GI: 254781003 and protein with PDBid: 2jc4
>2jc4_A Exodeoxyribonuclease III; hydrolase, repair phosphodiesterase, DNA repair, exonuclease, endonuclease; HET: 1PE; 1.90A {Neisseria meningitidis} Length = 256
Score = 51.3 bits (121), Expect = 3e-07
Identities = 34/282 (12%), Positives = 73/282 (25%), Gaps = 29/282 (10%)
Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAK 82
++ +WN+N +++ V+ + DI+ LQE + A
Sbjct: 2 KITTWNVN------SLNVRLPQVQ----------NLLADNPPDILVLQELKLDQDKFPAA 45
Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
W +S ++ N S + Q+
Sbjct: 46 ALQMMGWHCVWSGQKTYNGVAIVSRSVPQDVHFGLPALPDDPQRRVIAATVSGVRVINVY 105
Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
E L K L F + + + + +K
Sbjct: 106 CVNGEALDSPKFKYKEQWFAALTEFVRDEMTRHGKLVLLGDFNIAPADADCYDPEKWHEK 165
Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
+ + D + + P + + + + LR ID+ ++
Sbjct: 166 IHCSSVERQWFQNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLR----IDHILV 221
Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
L + +R SDH P++ ++D+
Sbjct: 222 SPAMAAALKD---VRVDLETRA----LERPSDHAPVTAEFDW 256