RPSBLAST alignment of GI: 254781003 and protein with PDBid: 2jc4

>2jc4_A Exodeoxyribonuclease III; hydrolase, repair phosphodiesterase, DNA repair, exonuclease, endonuclease; HET: 1PE; 1.90A {Neisseria meningitidis} Length = 256
 Score = 51.3 bits (121), Expect = 3e-07
 Identities = 34/282 (12%), Positives = 73/282 (25%), Gaps = 29/282 (10%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAK 82
           ++ +WN+N       +++    V+              +   DI+ LQE  +      A 
Sbjct: 2   KITTWNVN------SLNVRLPQVQ----------NLLADNPPDILVLQELKLDQDKFPAA 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 W   +S ++  N     S +                Q+                
Sbjct: 46  ALQMMGWHCVWSGQKTYNGVAIVSRSVPQDVHFGLPALPDDPQRRVIAATVSGVRVINVY 105

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
               E L     K        L  F   +   +         +        +  +K    
Sbjct: 106 CVNGEALDSPKFKYKEQWFAALTEFVRDEMTRHGKLVLLGDFNIAPADADCYDPEKWHEK 165

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           +          +        D  + + P  +   +   + +       LR    ID+ ++
Sbjct: 166 IHCSSVERQWFQNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLR----IDHILV 221

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                  L       +           +R SDH P++ ++D+
Sbjct: 222 SPAMAAALKD---VRVDLETRA----LERPSDHAPVTAEFDW 256