RPSBLAST alignment of GI: 254781003 and protein with PDBid: 3ngq
>3ngq_A CCR4-NOT transcription complex subunit 6-like; alpha/beta sandwich fold, hydrolase; HET: 1PS; 1.80A {Homo sapiens} PDB: 3ngo_A 3ngn_A Length = 398
Score = 44.6 bits (104), Expect = 3e-05
Identities = 41/353 (11%), Positives = 89/353 (25%), Gaps = 69/353 (19%)
Query: 21 AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-- 76
+ ++ +N+ + + ++ + + + N DADI+ LQE+ +
Sbjct: 29 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ 88
Query: 77 -YNAVAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS------- 127
+ + F R S+++ + AI + + ++Q+
Sbjct: 89 YFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 148
Query: 128 --YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL---KSFCFLDSLENTYSPSCS 182
G++ +R + + + V + K + L + N +
Sbjct: 149 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGMKPIHAADKQLLIVANAHMHWDP 208
Query: 183 LLS----QQAQWLKDWITQKKESL-------------VPFVIAGDFN--------RKINY 217
S Q + E +P V+ D N ++
Sbjct: 209 EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSN 268
Query: 218 LGNNDDF-----------WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---------- 256
G D+ N N +
Sbjct: 269 GGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDFK 328
Query: 257 --IDY-FVMDQNAY--KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
IDY F + L ++ N SDH + +
Sbjct: 329 GVIDYIFYSKTHMNVEGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLEL 381