RPSBLAST alignment of GI: 254781003 and SCOP domain: d1sr4b_

Alignment

 Score = 49.5 bits (116), Expect = 3e-07
 Identities = 35/288 (12%), Positives = 86/288 (29%), Gaps = 36/288 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-- 79
              ++ +WN+             ++V  +  +  + +  +    ADI+ +QE GS  +  
Sbjct: 3   SDFKVATWNLQ----------GSSAVNESKWNINVRQLLSGEQGADILMVQEAGSLPSSA 52

Query: 80  --VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK--NVRVLQQSYPLLGAKD 135
              ++V       I   T  L   S+ +     ++ + V     N+ ++ +         
Sbjct: 53  VRTSRVIQHGGTPIEEYTWNLGTRSRPNMVYIYYSRLDVGANRVNLAIVSRRQADEAFIV 112

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
               +  +    + + I         +H  +    D++                      
Sbjct: 113 HSDSSVLQSRPAVGIRIGT--DVFFTVHALATGGSDAVSLIR--------NIFTTFNSSS 162

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
           +  +  +  +++ GDFNR        +                    +            
Sbjct: 163 SPPERRVYSWMVVGDFNR-----APANLEVALRQEPAVSENTIIIAPTEPTHRSGNI--- 214

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +DY ++         +++   I  +    + R +  SDH P+S   D
Sbjct: 215 -LDYAILHDAHLPR-REQARERIGASLMLNQLRSQITSDHFPVSFVRD 260

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: DNase I-like
domain: Cytolethal distending toxin subunit B
species: Haemophilus ducreyi [TaxId: 730]