RPSBLAST alignment of GI: 254781003 and SCOP domain: d1wdua_

Alignment

 Score = 46.2 bits (108), Expect = 4e-06
 Identities = 34/285 (11%), Positives = 67/285 (23%), Gaps = 69/285 (24%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R++  N+                 R       L   A    A I  +QE   Y   AK  
Sbjct: 4   RVLQANLQ----------------RKKLATAELAIEAATRKAAIALIQEP--YVGGAKSM 45

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                   +        S    +  +  AIAV   ++ V+Q                   
Sbjct: 46  KGFRGVRVF-------QSTAQGDGTVKAAIAVFDHDLDVIQYPQL-----------TTNN 87

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
            V + +     +I ++  + +    ++S           +  +                 
Sbjct: 88  IVVVGIRTRAWEITLVSYYFEPDKPIESYLEQIKRVERKMGPK----------------R 131

Query: 205 FVIAGDFNRK------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
            +  GD N K             D    T+      I    +  +        R +  +D
Sbjct: 132 LIFGGDANAKSTWWGSKEDDARGDQLMGTLGELGLHILNEGDVPTFDTIRGGKRYQSRVD 191

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ++    +       +              SDH  +  +  
Sbjct: 192 VTFCTEDMLDLIDG---WRVD--------EDLVSSDHNGMVFNIR 225

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: DNase I-like
domain: Endonuclease domain of TRAS1 retrotransposon (ORF2)
species: Silkworm (Bombyx mori) [TaxId: 7091]