RPSBLAST alignment of GI: 254781003 and SCOP domain: d2ddra1

Alignment

 Score = 58.5 bits (139), Expect = 6e-10
 Identities = 39/309 (12%), Positives = 90/309 (29%), Gaps = 39/309 (12%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +++++ N+  LS     +  +           L+       + D+V L E+   +A  +
Sbjct: 3   TLKVMTHNVYMLSTNLYPNWGQTERAD------LIGAADYIKNQDVVILNEVFDNSASDR 56

Query: 83  VFPKNTWCIFYSTERLINHSKRDSN-----------NDIHTAIAVRKKNVRVLQQSYPLL 131
           +           T  L   S  + +            D   AI  +      +Q  +   
Sbjct: 57  LLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKIQYVFAKG 116

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
              D+ S    +  V   ++ N + + V+  HL++   +    +         +Q  +  
Sbjct: 117 CGPDNLSN---KGFVYTKIKKNDRFVHVIGTHLQAEDSMCGKTSPA---SVRTNQLKEIQ 170

Query: 192 KDWITQKKESLVPFVIAGDFN--------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
                +   +    +I GD N           +   +         P+ +      +  +
Sbjct: 171 DFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGHTATWDATT 230

Query: 244 RCNANKNLRNKIP--IDYFVMDQNAYK------FLIQESFSEILYNEDDIKSRGKRLSDH 295
              A  N  +     +DY +  ++          ++Q    +        K      SDH
Sbjct: 231 NSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTYNDYSDH 290

Query: 296 CPISIDYDF 304
            P+      
Sbjct: 291 YPVEATISM 299

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Sphingomyelin phosphodiesterase-like
domain: Sphingomyelin phosphodiesterase C
species: Bacillus cereus [TaxId: 1396]