HHsearch alignment for GI: 254781004 and conserved domain: KOG1885

>KOG1885 consensus.
Probab=96.24  E-value=0.025  Score=35.91  Aligned_cols=97  Identities=23%  Similarity=0.262  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHHHHH-HCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCHHHHHHHHHHC
Q ss_conf             899999999999887-6896385554324431000112100125554201001456777823774343125777765201
Q gi|254781004|r  273 WKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG  351 (652)
Q Consensus       273 ~~i~~~ie~~ir~~~-~~G~~eV~tP~l~~~~Lw~~SGh~~~y~~~mf~~~~~~~~~~~~~~~~LkPmncp~h~~i~~~~  351 (652)
T Consensus       225 f~~RakII~~iRkfld~rgFlEVETPmmn~i-----aGGA~A-k--PFIT--~hn--dldm~LylRiAPEL~lK~LvVGG  292 (560)
T KOG1885         225 FRIRAKIISYIRKFLDSRGFLEVETPMMNMI-----AGGATA-K--PFIT--HHN--DLDMDLYLRIAPELYLKMLVVGG  292 (560)
T ss_pred             HHHHHHHHHHHHHHHHHCCCEEECCHHHCCC-----CCCCCC-C--CEEE--CCC--CCCCCEEEEECHHHHHHHHHHCC
T ss_conf             9999999999999865449568444655254-----686325-7--6043--145--56755145636599999898601


Q ss_pred             CCCHHHCCHHHHHHEEEECCCCCCCCEEEEECCCCCCCCCE
Q ss_conf             22223104320001000127876452000105635334421
Q gi|254781004|r  352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH  392 (652)
Q Consensus       352 ~~SYrdLPlrl~e~~~~~R~E~sg~l~GL~R~ReF~~~Dah  392 (652)
T Consensus       293 l-------drVYEIGr~FRNEGI----DlTHNPEFTTcEfY  322 (560)
T KOG1885         293 L-------DRVYEIGRQFRNEGI----DLTHNPEFTTCEFY  322 (560)
T ss_pred             H-------HHHHHHHHHHHHCCC----CCCCCCCCCHHHHH
T ss_conf             7-------899998787630576----65458774218999