HHsearch alignment for GI: 254781004 and conserved domain: PRK04172

>PRK04172 pheS phenylalanyl-tRNA synthetase subunit alpha; Provisional.
Probab=96.74  E-value=0.0075  Score=39.53  Aligned_cols=142  Identities=18%  Similarity=0.263  Sum_probs=80.7

Q ss_pred             HHHHHHHHHHHHHHHHH-CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCC-----------
Q ss_conf             78999999999998876-896385554324431000112100125554201001456777823774343-----------
Q gi|254781004|r  272 GWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM-----------  339 (652)
Q Consensus       272 G~~i~~~ie~~ir~~~~-~G~~eV~tP~l~~~~Lw~~SGh~~~y~~~mf~~~~~~~~~~~~~~~~LkPm-----------  339 (652)
T Consensus       243 ~~Hp~~~~~~~~r~i~~~mGF~e~~g~~v-e~~fwN--------fdaLf~Pq~HPARd~~Dtf~l~~~~~~~lp~~~~~~  313 (501)
T PRK04172        243 KKHPYREFIEEVRDILVEMGFEEVKGPIV-ETEFWN--------FDALFQPQDHPAREMQDTFYLKYPSKGELPEELVER  313 (501)
T ss_pred             CCCHHHHHHHHHHHHHHHCCCEEEECCCE-ECCCCC--------HHHHCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHH
T ss_conf             74889999999999999789768536610-100003--------343058989985554453786576545573788988


Q ss_pred             ----CHH------------------------HHHHHHHH-CCCCHHHCCHHHHHHEEEECCCCCCCCEEEEECCCCCCCC
Q ss_conf             ----125------------------------77776520-1222231043200010001278764520001056353344
Q gi|254781004|r  340 ----NCP------------------------GHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD  390 (652)
Q Consensus       340 ----ncp------------------------~h~~i~~~-~~~SYrdLPlrl~e~~~~~R~E~sg~l~GL~R~ReF~~~D  390 (652)
T Consensus       314 Vk~~HE~Gg~~gS~Gw~y~w~~~~~~~~~lRthtt~~~~r~l~~~~~~p~~~f~~~rvfR~e~~d~----tH~~~F~Q~e  389 (501)
T PRK04172        314 VKEVHEHGGDTGSRGWGYKWDEDIAKRLVLRTHTTALSARYLAERPEPPGKYFSIGRVFRPETIDA----THLPEFYQLE  389 (501)
T ss_pred             HHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEECCCCEEECCCCCC----CCCCEEEEEE
T ss_conf             999874277678877677778556643010436746679999746899835735650542688886----5441332224


Q ss_pred             CEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCC
Q ss_conf             2101053767887899999988766552133210001465
Q gi|254781004|r  391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR  430 (652)
Q Consensus       391 ah~F~~~eq~~~e~~~~~~~~~~v~~~~g~~~~~~~ls~~  430 (652)
T Consensus       390 g~v~~~----~~~~~~L~g~l~~f~~~~g~~~~rfrp~yf  425 (501)
T PRK04172        390 GIVMGE----DVSFRHLLGILKEFYKRLGFEEVKFRPAYF  425 (501)
T ss_pred             EEEECC----CCCHHHHHHHHHHHHHHHCCCCEEECCCCC
T ss_conf             899848----887999999999999985886078679989