HHsearch alignment for GI: 254781004 and conserved domain: PRK04173
>PRK04173 glycyl-tRNA synthetase; Provisional.
Probab=100.00 E-value=0 Score=368.59 Aligned_cols=346 Identities=19% Similarity=0.278 Sum_probs=272.1
Q ss_pred CCCEEEEECCHHHHHHHHHHHHHHHH--HC-CCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECC--------------
Q ss_conf 87435650107899999999999887--68-96385554324431000112100125554201001--------------
Q gi|254781004|r 262 GSGVIFWHRKGWKIFQTLISYMRRKI--KD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA-------------- 324 (652)
Q Consensus 262 ~~G~~~wlP~G~~i~~~ie~~ir~~~--~~-G~~eV~tP~l~~~~Lw~~SGh~~~y~~~mf~~~~~-------------- 324 (652)
T Consensus 29 ~ag~~DyGPlG~~LK~Ni~~~W~~~fv~~~~~~~~id~~ii~~~~V~~ASGHv~~F~D~~v~c~~~~~r~RaD~Lie~~~ 108 (460)
T PRK04173 29 LAGFWDYGPLGVELKNNIKKAWWKSFVQERPDVVGIDSPIIMPPEVWKASGHVDNFSDPLVECKKCKKRYRADHLIEEYL 108 (460)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCCCCCCCCCEEECCCCCCEECHHHHHHHHH
T ss_conf 12361558535999999999999998652587788614444898785446774656762347576783630167766653
Q ss_pred ---------------------------------------------CCCCCCCCEEEECCCCHHHHHHHHHHCCCCHHH-C
Q ss_conf ---------------------------------------------456777823774343125777765201222231-0
Q gi|254781004|r 325 ---------------------------------------------DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE-L 358 (652)
Q Consensus 325 ---------------------------------------------~~~~~~~~~~~LkPmncp~h~~i~~~~~~SYrd-L 358 (652)
T Consensus 109 ~~~~~~~~~~~l~~~i~~~~i~cP~cg~~~lt~~~~FNLMF~T~iG~~~~~~~~~YLRPETAQGiFvnFk~v~~~~r~Kl 188 (460)
T PRK04173 109 GIDAEGLSNEELEELIEENNIKCPECGGENWTEVRQFNLMFKTFIGPVEDSSSLGYLRPETAQGIFVNFKNVLRTARKKL 188 (460)
T ss_pred HHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 20123358999999999708879999996775443120555751355667775023160441045661199999717788
Q ss_pred CHHHHHHEEEECCCCCCCCEEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCH
Q ss_conf 43200010001278764520001056353344210105376788789999998876655213321000146531125860
Q gi|254781004|r 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438 (652)
Q Consensus 359 Plrl~e~~~~~R~E~sg~l~GL~R~ReF~~~Dah~F~~~eq~~~e~~~~~~~~~~v~~~~g~~~~~~~ls~~~~~~~g~~ 438 (652)
T Consensus 189 PFgiaQIGKaFRNEIsP-r~~lfR~REFeQmEiE~F~~P~~~~e~~~yw~~~~~~fl~~lGi~~~~lR~r~h~~~----- 262 (460)
T PRK04173 189 PFGIAQIGKSFRNEITP-RNFIFRTREFEQMELEFFVKPGTDEEWFAYWIALRKNFLLDLGIDPENLRFREHLPE----- 262 (460)
T ss_pred CEEEEECCCCCCCCCCC-CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCH-----
T ss_conf 80431004001243065-545122345555243310586745899999999999999983998899478630613-----
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC----CCCCCHHHHCCCCCCCCCCCHHHHCCCCCCCEEEEE-
Q ss_conf 357789999999998502121256675205555554554----321100211033100121101110223467416731-
Q gi|254781004|r 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP----KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS- 513 (652)
Q Consensus 439 ~~~~~ae~~l~~~l~~~~~~~~~~~~~~~~~g~~afygp----kid~~~~d~~gr~~~~~tiq~df~~p~~f~l~y~~~- 513 (652)
T Consensus 263 elAHYa~-------------~~~D~E~~~~~Gw~E~~Gia~RtdyDL~~H~~---------------~-Sg~~L~~~d~~ 313 (460)
T PRK04173 263 ELAHYSK-------------ATWDIEYKFPFGWGELEGIANRTDYDLSRHSK---------------H-SGEDLSYFDQE 313 (460)
T ss_pred HHCCCCH-------------HHEEEEEECCCCEEEEEEECCCCHHHHHHHHH---------------H-CCCCEEEEECC
T ss_conf 4200022-------------00558994589828876640642102788987---------------4-48871798225
Q ss_pred CCCEEEEEEEEECCCHHHHHHHHHHHHH-H------C------CCCCCCCCCEEEEEEEC--CHHHHHHHHHHHHHHHHC
Q ss_conf 7972137996403410378999999997-3------8------70887337808999857--966899999999999987
Q gi|254781004|r 514 HSEKCHPVMIHRAVFGSIERFIGIMIEN-F------K------GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSH 578 (652)
Q Consensus 514 dg~~~~pvmihr~~~Gs~eR~ia~liE~-~------~------g~~P~wLAP~QV~Iipi--~e~~~eya~~i~~~L~~~ 578 (652)
T Consensus 314 ~~~k~iPhVIE-pS~G-vdR~~la~L~~ay~ee~~~~~e~R~vL~l~p~lAPikvaVlPL~kk~~l~~~a~~i~~~L~~~ 391 (460)
T PRK04173 314 TGEKYIPYVIE-PSFG-LDRLFLAFLEDAYTEEELGDGDKRTVLRLPPALAPVKVAVLPLVKKDKLSEKAREIYAELRKD 391 (460)
T ss_pred CCCEECCEEEE-ECCC-CCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 58561340564-0467-108999999876520004787505899626645771699996556612589999999999877
Q ss_pred CCEEEEECCCCCCCHHHHHHHHCCCCEEEEECHHHHHCCCEEEEECCCCCEEEECHHHHHHHHHHHC
Q ss_conf 9889997589663676665543489889998742532581899988988663342999999998731
Q gi|254781004|r 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645 (652)
Q Consensus 579 girV~~Ddr~~~~G~Kir~a~l~giP~~ivIG~ke~e~~~Vtir~R~~~~~~~i~lee~i~~l~~e~ 645 (652)
T Consensus 392 ~~~~~~D~sg-sIGkRY~R~DeiGtPf~ITiD~~tled~tVTiR~RDt~~Q~Rv~i~~l~~~l~~~~ 457 (460)
T PRK04173 392 GFNVDYDDSG-SIGKRYRRQDEIGTPFCVTVDFDTLEDNTVTIRDRDTMEQVRVKIDELEDYLAEKL 457 (460)
T ss_pred CCEEEEECCC-CHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHH
T ss_conf 9759996899-85454453102689879997688676894897835875348989999999999986