HHsearch alignment for GI: 254781004 and conserved domain: PRK07569
>PRK07569 bidirectional hydrogenase complex protein HoxU; Validated.
Probab=94.68 E-value=0.28 Score=28.64 Aligned_cols=79 Identities=23% Similarity=0.276 Sum_probs=50.9
Q ss_pred CCCCEEEECCCCCEEECCCCCCHHHHHHHHCCCCCC-------------CEEEEEECC--EEEEC-CEEECCCEEEEECC
Q ss_conf 988708992899887418988899999863611011-------------289999898--89977-45303670798628
Q gi|254781004|r 1 MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAK-------------KAVAVAING--KVCDL-SDPVREGSIEIITP 64 (652)
Q Consensus 1 M~~~i~I~lpDG~~~~~~~g~t~~dia~~i~~~~~~-------------~~vaa~vng--~l~dL-~~~l~d~~i~~i~~ 64 (652)
T Consensus 1 M~-mvtltI-dG~~v~v~~G~tILeaa~~~Gi~IP~LCy~~~l~~~G~CR~C~VEveG~~~lv~sC~t~v~eGM~--V~T 76 (236)
T PRK07569 1 MS-VKTLTI-DDQLVSAREGETILQAAREAGIPIPTLCHLEGVSDVGACRLCLVEVEGSNKLLPACVTPVAEGMV--VQT 76 (236)
T ss_pred CC-EEEEEE-CCEEEEECCCCHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCE--EEE
T ss_conf 97-389999-99999968989599999985998472546899398886673279989985315663758899848--992
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999989999999
Q gi|254781004|r 65 EDPRSLAVIRHSCAHIMAE 83 (652)
Q Consensus 65 ~~~eg~~i~~hS~ahlL~~ 83 (652)
T Consensus 77 ~s~~v~~~Rk~~lellL~~ 95 (236)
T PRK07569 77 NTPRLQEYRRMIVELLFAE 95 (236)
T ss_pred CCHHHHHHHHHHHHHHHHC
T ss_conf 9989999999999999972