HHsearch alignment for GI: 254781004 and conserved domain: PRK12305
>PRK12305 thrS threonyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=0 Score=1484.98 Aligned_cols=557 Identities=39% Similarity=0.721 Sum_probs=534.5
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
Q ss_conf 99999989999999999977998899724358855788408888889899999999999996699804853276785445
Q gi|254781004|r 70 LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL 149 (652)
Q Consensus 70 ~~i~~hS~ahlL~~Av~~l~p~~kl~igp~i~~GfYyD~~~~~~it~~dl~~Ie~~M~~ii~~~~pi~r~~vs~~eA~~~ 149 (652)
T Consensus 4 ~~~lRHS~AHila~Av~~l~p~~kl~iGP~ie~GFYYDf~~~~~~t~~Dl~~IE~~m~~iik~~~~~~r~~~~~----~~ 79 (576)
T PRK12305 4 DKKLNHSTSHLLAAAILKLYPNVKLGIGPAIDEGFYYDFDFEDPLSESDLLKIEKLMKKLASQNLKMVKVDGAN----YD 79 (576)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHH----HH
T ss_conf 52003359999999999977997699789868866686246999998999999999999985899879833507----86
Q ss_pred HHHCCCHHHHHHHHHCCC-CCCCEEECCCC------CEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
Q ss_conf 441671135566542034-55421302575------20100023552144422233333321110157756420689999
Q gi|254781004|r 150 FESKKEAYKVEILESIPA-KENVTLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222 (652)
Q Consensus 150 F~~~~~~~K~~li~~~~~-~~~v~~y~~g~------~~Dlc~GphvpsTg~ik~~fkL~~~sgayw~gd~~~~~l~Riyg 222 (652)
T Consensus 80 f~--~~~yK~eli~~~~~~~~~i~~y~~~~~~~~~~f~DLCrGpHv~~t~~ika-fkL~~vsgaYWrGd~~n~~LqRIYG 156 (576)
T PRK12305 80 FK--NQPYKKELYEELKKKGEEITFYSIVDPKNKELFFDLCAGNHVESTKEIKN-FKLLSIAGAYWRGDSKNKQLTRIYG 156 (576)
T ss_pred HC--CCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCE-EEEEECCCCEECCCCCCCEEEEEEE
T ss_conf 75--89079999852734696488996367666772658789988897232424-6886436630357875810089999
Q ss_pred EEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC-CCCEEEEECCHHHHHHHHHHHHHHHH-HCCCEEEECCCCC
Q ss_conf 983798899999999997532008875411440442267-87435650107899999999999887-6896385554324
Q gi|254781004|r 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300 (652)
Q Consensus 223 ~af~~~~~l~~~~~~~eea~~rdHr~lg~~~~lf~~~~~-~~G~~~wlP~G~~i~~~ie~~ir~~~-~~G~~eV~tP~l~ 300 (652)
T Consensus 157 ~af~~k~~L~~yl~~~eEakkRDHRklGkel~LF~f~~~~gpG~~~wlP~G~~i~~~le~~~r~~~~~~Gy~eV~TP~i~ 236 (576)
T PRK12305 157 TSWESKEELDKYLAILQERKERDHRKIGKDLKLFTFSSLAGQGFPIWLENGMIIKNAIRKFILELDRKYGFDEVLTPHFG 236 (576)
T ss_pred EEECCHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
T ss_conf 97179889999999999998657787642156587234468876467476789999999999999998699898464214
Q ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHCCHHHHHHEEEECCCCCCCCEEE
Q ss_conf 43100011210012555420100145677782377434312577776520122223104320001000127876452000
Q gi|254781004|r 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380 (652)
Q Consensus 301 ~~~Lw~~SGh~~~y~~~mf~~~~~~~~~~~~~~~~LkPmncp~h~~i~~~~~~SYrdLPlrl~e~~~~~R~E~sg~l~GL 380 (652)
T Consensus 237 ~~~Lw~~SGH~~~Y~e~Mf~~~~-----~~~e~~~lKPMNCP~H~~if~~~~rSYRdLPlR~aEfg~~~R~E~SG~L~GL 311 (576)
T PRK12305 237 EKKLYKTSGHLDHYKDDMFKPLK-----IENEELIPRPMTCPHHIILYSNELRSYRDLPIRLSEQSRLYRYEKSGALTGL 311 (576)
T ss_pred CHHHHHHCCCHHHHHHHCCCCEE-----CCCCEEEECCCCCHHHHHHHHCCCCCHHHCCHHHHCCCCEECCCCCCCCCCC
T ss_conf 28899766646556642573063-----1564165357786326777642775444324220004435447888655575
Q ss_pred EECCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCC----CCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 10563533442101053767887899999988766552133210001465----31125860357789999999998502
Q gi|254781004|r 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIK 456 (652)
Q Consensus 381 ~R~ReF~~~Dah~F~~~eq~~~e~~~~~~~~~~v~~~~g~~~~~~~ls~~----~~~~~g~~~~~~~ae~~l~~~l~~~~ 456 (652)
T Consensus 312 ~RvR~FtqDDAHIFct~dQi~~Ei~~~l~~i~~vy~~fGf~~~~~~lS~r~~~~~ek~~g~de~W~~Ae~~L~~al~~~g 391 (576)
T PRK12305 312 ERVRAMDLTEGHIFVRKDQIESEVKHLFKMIQEALSIFKIKIFYISLSLRDPNDKEKFFDDDQMWEQAEADLKKMLKDNK 391 (576)
T ss_pred CCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 54668876871212089999999999999999999853987315899943898875345972769999999999999749
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHCCCCCCCEEEEECCCEEEEEEEEECCCHHHHHHHH
Q ss_conf 12125667520555555455432110021103310012110111022346741673179721379964034103789999
Q gi|254781004|r 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536 (652)
Q Consensus 457 ~~~~~~~~~~~~~g~~afygpkid~~~~d~~gr~~~~~tiq~df~~p~~f~l~y~~~dg~~~~pvmihr~~~Gs~eR~ia 536 (652)
T Consensus 392 ------~~y~~~~GegAFYGPKID~~v~DalgR~wq~~TIQlDf~lPeRF~l~Y~~~dg~~~rPVmIHRAilGS~ERfig 465 (576)
T PRK12305 392 ------INYKEMIGEAAFYGPKIDFQVKTVLNKEITVSTIQLDFLLPEKFNISYINENNEKETPVLIHRGLIGTYERFIA 465 (576)
T ss_pred ------CCCEECCCCCCEECCCCCEEEECCCCCEEEEEEEEEEECCHHHCCCEEECCCCCCCCCEEEEECCCCCHHHHHH
T ss_conf ------97142306501056763469850678678742456663458557988877888767875987335474899999
Q ss_pred HHHHHHCCCCCCCCCCEEEEEEECCHH-HHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEECHHHHH
Q ss_conf 999973870887337808999857966-8999999999999879889997589663676665543489889998742532
Q gi|254781004|r 537 IMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615 (652)
Q Consensus 537 ~liE~~~g~~P~wLAP~QV~Iipi~e~-~~eya~~i~~~L~~~girV~~Ddr~~~~G~Kir~a~l~giP~~ivIG~ke~e 615 (652)
T Consensus 466 iLiEh~~G~~P~WLaP~Qv~IipV~e~~~~~ya~~v~~~L~~~giRv~vD~~~e~lg~KIR~a~~~kiPy~lVvGdkE~~ 545 (576)
T PRK12305 466 ILLEQTKGNLPFWLSPKQVIIIPVNENLNTDYAKELNKKLFKLGFRSEIDLRNERLSKKIREAQISKIKFQIIIGDEEIK 545 (576)
T ss_pred HHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEEHHHHH
T ss_conf 99997079998362730379995386035999999999999789879997899967699999753499989998003554
Q ss_pred CCCEEEEECCCCCEEEECHHHHHHHHHHH
Q ss_conf 58189998898866334299999999873
Q gi|254781004|r 616 ERSIGIRRFGSTTTQKVSLLDAIPILTKE 644 (652)
Q Consensus 616 ~~~Vtir~R~~~~~~~i~lee~i~~l~~e 644 (652)
T Consensus 546 ~~~VsvR~r~~~~~~~~~l~efi~~l~~l 574 (576)
T PRK12305 546 NNTITYRKYGSEETTTVSIEDFIKMLKNL 574 (576)
T ss_pred CCEEEEEECCCCCCCEEEHHHHHHHHHHH
T ss_conf 59689997788855546899999999973