HHsearch alignment for GI: 254781004 and conserved domain: cd01616
>cd01616 TGS The TGS domain, named after the ThrRS, GTPase, and SpoT/RelA proteins where it occurs, is structurally similar to ubiquitin. TGS is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=98.87 E-value=6.5e-09 Score=81.34 Aligned_cols=59 Identities=32% Similarity=0.508 Sum_probs=55.3
Q ss_pred EEEECCCCCEEECCCCCCHHHHHHHHCCCCCCCEEEEEECCEEEECCEEECC-CEEEEEC
Q ss_conf 0899289988741898889999986361101128999989889977453036-7079862
Q gi|254781004|r 5 IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63 (652)
Q Consensus 5 i~I~lpDG~~~~~~~g~t~~dia~~i~~~~~~~~vaa~vng~l~dL~~~l~d-~~i~~i~ 63 (652)
T Consensus 1 i~vftP~G~~~~lP~GaT~~D~A~~Iht~lg~~~~~a~Vng~~~~l~~~L~~gd~V~IiT 60 (60)
T cd01616 1 MIIFTPDGSAVELPKGATAMDFALKIHTDLGKGFIGALVNGQLVDLSYTLQDGDTVSIVT 60 (60)
T ss_pred CEEECCCCCEEECCCCCCHHHHHHHHCCCHHHEEEEEEECCEECCCCCCCCCCCEEEEEC
T ss_conf 999899998798899898999999876361545999999999965166999999999979