HHsearch alignment for GI: 254781004 and conserved domain: pfam00152

Probab=98.12  E-value=1.8e-05  Score=57.64  Aligned_cols=118  Identities=16%  Similarity=0.178  Sum_probs=73.6

Q ss_pred             HHHHHHHHHHHHHHHH-HCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCHHHHHHHHHH
Q ss_conf             7899999999999887-689638555432443100011210012555420100145677782377434312577776520
Q gi|254781004|r  272 GWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH  350 (652)
Q Consensus       272 G~~i~~~ie~~ir~~~-~~G~~eV~tP~l~~~~Lw~~SGh~~~y~~~mf~~~~~~~~~~~~~~~~LkPmncp~h~~i~~~  350 (652)
T Consensus        21 ~l~~Rs~i~~~iR~ff~~~~f~EV~TP~L~~~~---~e~~a-----~~F~~~~~-----~~~~~yL~~Spel~~k~ll~-   86 (341)
T pfam00152        21 NLKLRSKIIRAIREFLDERGFLEVETPILTKST---PEGGA-----RDFLVPKF-----YAKEAYLPQSPQLYKQLLMV-   86 (341)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC---CCCCC-----CEEEECCC-----CCCCEEECCCHHHHHHHHHH-
T ss_conf             999999999999999998898998798200558---98777-----66450267-----89823405488999999986-


Q ss_pred             CCCCHHHCCHHHHHHEEEECCCCC-CCCEEEEECCCCCCCCCE-EECCHHHHHHHHHHHHHHHHH
Q ss_conf             122223104320001000127876-452000105635334421-010537678878999999887
Q gi|254781004|r  351 GLKSYRELPVRLAEFGSVYRNEPS-GSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIIS  413 (652)
Q Consensus       351 ~~~SYrdLPlrl~e~~~~~R~E~s-g~l~GL~R~ReF~~~Dah-~F~~~eq~~~e~~~~~~~~~~  413 (652)
T Consensus        87 ---~--g~-~rVfei~~~FR~E~~~t~r----H~~EFtmlE~y~a~~d~~d~m~~~E~li~~i~~  141 (341)
T pfam00152        87 ---A--GF-DRVFQIAPCFRDEDLRTDR----HPPEFTQLDLEMSFVDYEDVMDLTEDLIKYVFK  141 (341)
T ss_pred             ---C--CC-CCCEEEECHHCCCCCCCCC----CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf             ---5--88-7637972320279898865----507788776755359999999999999999999