HHsearch alignment for GI: 254781004 and conserved domain: pfam03129

>pfam03129 HGTP_anticodon Anticodon binding domain. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases it is probably the anticodon binding domain.

Probab=99.80  E-value=9.4e-19  Score=149.24  Aligned_cols=90  Identities=27%  Similarity=0.451  Sum_probs=87.0

Q ss_pred             EEEEEECCHH--HHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEECHHHHHCCCEEEEECCCCCEEE
Q ss_conf             8999857966--89999999999998798899975896636766655434898899987425325818999889886633
Q gi|254781004|r  554 QAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK  631 (652)
Q Consensus       554 QV~Iipi~e~--~~eya~~i~~~L~~~girV~~Ddr~~~~G~Kir~a~l~giP~~ivIG~ke~e~~~Vtir~R~~~~~~~  631 (652)
T Consensus         1 qV~Vipi~~~~~~~~~a~~i~~~Lr~~gi~v~~d~~~~~~~~k~~~a~~~g~p~~iiiG~~E~~~~~v~ik~r~~~~~~~   80 (93)
T pfam03129         1 QVVVIPLGEKDELEDYAQKLAEELREAGIRVELDDRNESLGKKFRDADLIGIPFRLVVGEKELENGTVTVRDRDTGEKET   80 (93)
T ss_pred             CEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECHHHHHCCEEEEEECCCCCEEE
T ss_conf             99999822867689999999999987899799988999978999989870999078897788858989999999997889


Q ss_pred             ECHHHHHHHHHH
Q ss_conf             429999999987
Q gi|254781004|r  632 VSLLDAIPILTK  643 (652)
Q Consensus       632 i~lee~i~~l~~  643 (652)
T Consensus        81 v~~~~~~~~i~~   92 (93)
T pfam03129        81 VSLEELVEKLKE   92 (93)
T ss_pred             EEHHHHHHHHHH
T ss_conf             879999999974