PSIBLAST alignment of GI: 254781004 and protein with PDB id: 1qf6
gi|5107656|pdb|1QF6|A Chain A, Structure Of E. Coli Threonyl-Trna Synthetase Complexed With Its Cognate Trna Length = 642
Score = 641 bits (1652), Expect = 0.0, Method: Composition-based stats.
Identities = 298/655 (45%), Positives = 431/655 (65%), Gaps = 19/655 (2%)
Query: 1 MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
MP +T PDGS +++ + DVA I LAK +A +NG++ D D + + +
Sbjct: 1 MPV---ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQL 57
Query: 60 EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
IIT +D L +IRHSCAH++ A++ +WP ++AIGP+I++GFYYD D ++ + +++
Sbjct: 58 SIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDV 117
Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGE 178
+EK+M E+ ++ +K+ +S +ARE F ++ E+YKV IL+ A ++ LY E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEE 177
Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
+ D+CRGPHV + + FKLMK AGAYWRGDSN ML RIYGTAW ++ L YL L
Sbjct: 178 YVDMCRGPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236
Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTP 297
EE+ KRDHRK+ +++DL+H+ E+ G++FWH GW IF+ L ++R K + Y+E+ P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296
Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
++D+ LW+++GHWD+Y+ MF + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTT------SSENREYCIKPMNCPGHVQIFNQGLKSYRD 350
Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E L+ +Y
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYST 410
Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
FGFEKI+VKLSTRPEKR+GSD +WD AE + L+ ++ I LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464
Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
K E+ L D + R WQCGT+Q+DF+LPSR +A YV +E+ PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGI 524
Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
+ E F G P WL+P+Q ++ IT S EY E+ L + + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIRE 584
Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
H+++++P +++CGDKE + +R + + + I L +E ++
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQ 639