HHSEARCH alignment of GI: 254781009 and SCOP domain: d2o8sa1

Alignment
>d2o8sa1 a.295.1.1 (A:54-278) Uncharacterized protein AGR_C_984p {Agrobacterium tumefaciens [TaxId: 358]}
Probab=100.00  E-value=0  Score=380.05  Aligned_cols=208  Identities=30%  Similarity=0.472  Sum_probs=191.2

Q ss_pred             CCCCCCCC-CCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf             97520210-01254147999887608656889999998507758898996668999999997597244105999999982
Q gi|254781009|r    1 MIPSHVAP-FPSKDIQSKLFSTVSKDPIVSCEERYYRERIKHISTIDEFIKDKRLFSYALKAFGLSDMSHAEKFIKKILE   79 (750)
Q Consensus         1 ~~~~~~~~-~~~rd~~~~~~~~~a~~p~V~r~~~yy~~~I~~v~svDdll~D~rl~~yamkA~GLedm~~aka~~kKVLe   79 (750)
                      |+++|++| +..|++...+ ++++++|.|+||++||++|||+|+||||||+|+|||+|||+||||++|+++|+|||||||
T Consensus         1 ~~st~~~~~~l~r~~~~~~-~~~a~~~~v~re~~Yf~e~I~~v~svddll~D~rL~~~al~AfGL~~~~~~~~~lkkvL~   79 (225)
T d2o8sa1           1 VTSTYTSYRLISQDIGKSL-ERVSKQPDVARETEYYREKIGSVKSIDDFMADTRLYNYALKAHGLEDMAYAKAFIRKVLT   79 (225)
T ss_dssp             CCHHHHHHHHHHHTHHHHH-HHHTTSHHHHHHHHHHHHHGGGCCSHHHHHTCHHHHHHHHHHTTGGGSTTCHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHC
T ss_conf             9624999999983199999-998627788889999999836788899995488999999997699965363999999982


Q ss_pred             CCCCCCCHHHHHCCCHHHHHHHHHCCCCCC-CCCCCCHHHHHHHHHHH-HHHHHHHHCCCCHHHH---HHHHHCCCCCCH
Q ss_conf             689983301332066899999998187877-76442036788998877-8767753012210458---898511345899
Q gi|254781009|r   80 SDLSDPKSLVNQLNSLKYQYFARSYDFSPP-PKVIQSDIQHKTIIQDY-KQSHQHKEEVALEESK---YFRKNIHKINSV  154 (750)
Q Consensus        80 sd~~D~~s~aNkL~D~Ry~~fA~af~F~~~-~~~~~~~~~~~~~i~~y-~~~~~~~~~~~~~~~~---Yf~~~~~~Itsv  154 (750)
                      ||++||+||||||+|+||++||++|||+++ +..+|+..+++.++++| .++++...++++++++   ||+|++++|+++
T Consensus        80 sd~~d~~S~aN~l~D~Ry~~~a~AFnF~~~g~~~~~~~~~~~~i~~~Y~~~~~E~~~g~~d~~~rlALyf~r~~~~its~  159 (225)
T d2o8sa1          80 EGASDKNAFANKLSDNRYAELAKSLDFAGLGAAATATEAAKSGVIGNYARQTLEQEAGDDNNGVRLALYFERKAPTIKSG  159 (225)
T ss_dssp             HCSSSTTCGGGGSSSTHHHHHHHHTCHHHHGGGTTSSTTTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSTTCCSH
T ss_pred             CCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHCCH
T ss_conf             69987588988737888999999829999987554546889999999999998998457788899999999846012469


Q ss_pred             HHHHCCHHHHHHHHHHCCCCHHHCCHHHHH-------HHHCCCCCCCHHHHHCCCHHHHHHHHH
Q ss_conf             997243899999999739872120389998-------874188777002331035056999998
Q gi|254781009|r  155 DQLFKDRRLLDYVLQSFSITPKYISLPFLK-------DVLTLGLANPKKYFIESRDNRFRAMAE  211 (750)
Q Consensus       155 ddLL~D~~L~~vv~tAfGL~~~~~s~~~lk-------~vLtsD~sDp~S~~n~~~~~~y~~lAa  211 (750)
                      |+||+|++|++||+||||||++++..+..|       ++..+|+.||..+-.-  -.||..+-.
T Consensus       160 ~~iL~d~~L~~v~~talgLp~~~a~~did~Q~~~i~~k~d~sd~~DP~~v~~~--i~rf~~~~d  221 (225)
T d2o8sa1         160 LDFLADDALAQVFRTTFNLPDAFAAADVDKQAALIEKSINIKDLQDPEKVGKL--LERFTIMWE  221 (225)
T ss_dssp             HHHHTSHHHHHHHHTTTTC-----CCCCTTHHHHHHHSSCTTTTTCTTHHHHH--HHHHHHHHH
T ss_pred             HHHHCCHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHCCHHHCCCHHHHHHH--HHHHHHHHH
T ss_conf             99978889999999990998554338989999999965229755998999999--999999987


SCOP domain information

class: All alpha proteins
fold: AGR C 984p-like
superfamily: AGR C 984p-like
family: AGR C 984p-like
domain: Uncharacterized protein AGR C 984p
species: Agrobacterium tumefaciens [TaxId: 358]