BLAST/PSIBLAST alignment of GI: 254781009 and GI: 116248743 at iteration 1
>gi|116248743|ref|YP_764584.1| putative flagella associated protein [Rhizobium leguminosarum bv. viciae 3841] Length = 727
>gi|115253393|emb|CAK11781.1| putative flagella associated protein [Rhizobium leguminosarum bv. viciae 3841] Length = 727
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 209/712 (29%), Positives = 361/712 (50%), Gaps = 37/712 (5%)
Query: 1 MIPSHVAPFP-SKDIQSKLFSTVSKDPIVSCEERYYRERIKHISTIDEFIKDKRLFSYAL 59
M+ ++V+ ++++ + L S V+ V+ + YY+E I ++T+DEF+ D +L+SYA+
Sbjct: 1 MVSTYVSYLTVARNLNASL-SNVASQATVARDSAYYKENIDKVTTVDEFMSDYKLYSYAM 59
Query: 60 KAFGLSDMSHAEKFIKKILESDLSDPKSLVNQLNSLKYQYFARSYDFSPPPKVIQSDIQH 119
KA+GL DM++A+ F+KK+LESDLSD S N L+ +Y FA ++ F+ K QSD+Q
Sbjct: 60 KAYGLEDMTYAKAFMKKVLESDLSDSSSFANSLSDTRYAEFAAAFKFAGETKTAQSDVQR 119
Query: 120 KTIIQDYKQSHQHKEEVALEESKYFRKNIHKINSVDQLFKDRRLLDYVLQSFSITPKYIS 179
++ Y++S + + + YF NI I SVD L +L +YVL +F ++ +Y S
Sbjct: 120 DNLLDAYEESFDTEAGDIADATDYFEDNISSITSVDDLLSSSKLKNYVLTAFGLSTEYTS 179
Query: 180 LPFLKDVLTLGLANPKKYFIESRDNRFRAMAENFRFQPDGSLSKRDKILTDMQIEKIVSN 239
FLK VLT L + + D + +++ F F DG L+ D ++++ QI + S
Sbjct: 180 SSFLKSVLTSDLDETDSFVNQLDDEVYVNLSKAFNFNEDG-LTDGD-VMSEDQISLVTSA 237
Query: 240 YFNNTIDCVPIVSDQ------NYYKLAINSVSSFSDFLKDPKLFKMLQLSLFPLNPEITA 293
Y + I S + Y+ I +++S + + D KL L+ + + E
Sbjct: 238 Y---AVASATIASSETGEAYDTYFAAQIGNITSVDELMSDDKLVSYLRTAYGLTDSET-- 292
Query: 294 DKFLTLMQENDPIVSQV---KYFFQINFHRDN--SSSTKIQQDSQIQKMLDLYKKNCQIL 348
D F++ ++ I + + NF D + Q Q + +N ++L
Sbjct: 293 DNFISAALKSADIADAIGLSELHDAFNFDEDGALADGDTAQTSEQTAATTAAFDENYEVL 352
Query: 349 -HDDKMQSLIKDYQLPLGKIKSIDNLLSGKCQLEGPNSAEEPIITLQFALDAYNLNMQDL 407
+ + + +Y + + SID+ L + ++ + P + + AL AY+++ +
Sbjct: 353 IANTDTEDAVDNYTTRIASVTSIDDFLVSNDDDDDDDNDDLPEL-WEMALRAYDIDPDSV 411
Query: 408 DRDQLRNVLTSNPSDPDSYANKSKDDRLIKLNHAFNFNADGSIGPIPMMQSRLTIRDNVK 467
R ++R +L S+PSD SY N DDR + AFNF+ +G + +P+ ++ D+
Sbjct: 412 SRSEVRKILESDPSDSKSYVNSLDDDRFVAFRKAFNFDDNGDV-TVPLQAMSESVVDDYA 470
Query: 468 HY--ANRKRSIHDAENKSFNSMEQISTQKRINLEINSEVDYYTLNINTIHSFEELLANKR 525
Y N+ R + E M + + + + Y+ + TI + E LA+ R
Sbjct: 471 TYYKQNKIRYLEGDE------MTEATDAA------DEGITYFREQMATITTASEFLADDR 518
Query: 526 ILNFLLESKGIDSQKVREDFLCEIFKSDLKDPKSFANTYKDNRYKEIISSFNFDIHGELS 585
+++F+LE+KG+D V D L E+F SDL D S+ N DNR+ E++ +FNFD G +S
Sbjct: 519 LVSFVLEAKGLDPDDVTSDALEEMFASDLDDEDSYVNKLDDNRFAELVGAFNFDQDGNIS 578
Query: 586 HKKIGKVQDNFHIDDTCDLYKHQMIEKKEEEKDPNIALALYFKRTIPNIRNHYEILGDSK 645
+ G VQ + +T D Y +E + + + + LALYF+R P I + Y+ILGDS
Sbjct: 579 AEPTGTVQQRGDVLETIDAYVRLTLEDDQGDSNTGVRLALYFQRKAPEISSAYDILGDSA 638
Query: 646 LFKVVSKKLKLSPYFAVLPERKKIRILKKHIKINDFKDSKKVEDFLYAAKAM 697
LF+ + LS Y + + K+ ++ I I D D KV+D + AM
Sbjct: 639 LFEFFTTSFNLSSYVSNMDVDKQAEMIDNFIDIEDLSDPDKVDDLIKRFTAM 690