BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781010|ref|YP_003065423.1| hypothetical protein
CLIBASIA_04560 [Candidatus Liberibacter asiaticus str. psy62]
(195 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254781010|ref|YP_003065423.1| hypothetical protein CLIBASIA_04560 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040687|gb|ACT57483.1| hypothetical protein CLIBASIA_04560 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 195
Score = 357 bits (917), Expect = 3e-97, Method: Composition-based stats.
Identities = 195/195 (100%), Positives = 195/195 (100%)
Query: 1 MKSKNILIVSTLVICVLSISSCDLGDSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFK 60
MKSKNILIVSTLVICVLSISSCDLGDSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFK
Sbjct: 1 MKSKNILIVSTLVICVLSISSCDLGDSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFK 60
Query: 61 TEVKRDIRRASRLSLEEKSKNADKPTVIENQADNINIEVEVATNLNPNHQASEIDIAIEN 120
TEVKRDIRRASRLSLEEKSKNADKPTVIENQADNINIEVEVATNLNPNHQASEIDIAIEN
Sbjct: 61 TEVKRDIRRASRLSLEEKSKNADKPTVIENQADNINIEVEVATNLNPNHQASEIDIAIEN 120
Query: 121 LPDLKSNHQASEIDIAIENLPDLKSNHQASEIDIAIENLPDHQVDRNHTLSNLRGACYQP 180
LPDLKSNHQASEIDIAIENLPDLKSNHQASEIDIAIENLPDHQVDRNHTLSNLRGACYQP
Sbjct: 121 LPDLKSNHQASEIDIAIENLPDLKSNHQASEIDIAIENLPDHQVDRNHTLSNLRGACYQP 180
Query: 181 SLVSNSSLKLWDVAF 195
SLVSNSSLKLWDVAF
Sbjct: 181 SLVSNSSLKLWDVAF 195
>gi|71894021|ref|YP_279467.1| hypothetical protein MHJ_0673 [Mycoplasma hyopneumoniae J]
Length = 872
Score = 42.8 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 8/140 (5%)
Query: 39 IKKSINRVIQENNKPRNMTIFKTEVKRDIRRASRLSLEEKSKNADKPTVIENQADNINIE 98
++K N + ++N+ N ++ +++ SL+E N D T I N + ++IE
Sbjct: 265 MQKESNNLDEKNDNTINFKASINHLENQVQKNLENSLQETQINQDISTTISNNPEKVDIE 324
Query: 99 VEVATNLNPNHQASEIDIAIENLP-DLKSNHQASEIDIAIENLPDLKSNHQASEIDIAIE 157
+E N Q +++D++ LP + QA I++EN DL S + +++I E
Sbjct: 325 LEAILE---NSQENKVDLS--ELPANFNDKDQAESHQISLEN-ADLTSTNSVEKLEIE-E 377
Query: 158 NLPDHQVDRNHTLSNLRGAC 177
+ + Q D +NL C
Sbjct: 378 KIQEKQSDIRIISNNLEQNC 397
>gi|144227750|gb|AAZ44756.2| hypothetical protein MHJ_0673 [Mycoplasma hyopneumoniae J]
Length = 867
Score = 42.8 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 8/140 (5%)
Query: 39 IKKSINRVIQENNKPRNMTIFKTEVKRDIRRASRLSLEEKSKNADKPTVIENQADNINIE 98
++K N + ++N+ N ++ +++ SL+E N D T I N + ++IE
Sbjct: 260 MQKESNNLDEKNDNTINFKASINHLENQVQKNLENSLQETQINQDISTTISNNPEKVDIE 319
Query: 99 VEVATNLNPNHQASEIDIAIENLP-DLKSNHQASEIDIAIENLPDLKSNHQASEIDIAIE 157
+E N Q +++D++ LP + QA I++EN DL S + +++I E
Sbjct: 320 LEAILE---NSQENKVDLS--ELPANFNDKDQAESHQISLEN-ADLTSTNSVEKLEIE-E 372
Query: 158 NLPDHQVDRNHTLSNLRGAC 177
+ + Q D +NL C
Sbjct: 373 KIQEKQSDIRIISNNLEQNC 392
>gi|144575579|gb|AAZ54037.2| hypothetical protein MHP7448_0675 [Mycoplasma hyopneumoniae 7448]
Length = 867
Score = 42.0 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 39 IKKSINRVIQENNKPRNMTIFKTEVKRDIRRASRLSLEEKSKNADKPTVIENQADNINIE 98
++K N + ++N+ N +++ +++ SL+E N D T I N + ++IE
Sbjct: 260 MQKEANNLDEKNDNTINFKASINHLEKQVQKNLENSLQETQINQDISTTISNNPEKVDIE 319
Query: 99 VEVATNLNPNHQASEIDIAIENLP-DLKSNHQASEIDIAIENLPDLKSNHQASEIDIAIE 157
+E N Q +++D++ LP + QA I++EN DL S + +++I E
Sbjct: 320 LEAILE---NSQENKVDLS--ELPANFNDKDQAESHQISLEN-ADLTSTNSVEKLEIE-E 372
Query: 158 NLPDHQVDRNHTLSNLRGAC 177
+ + Q + +NL C
Sbjct: 373 KIQEKQSNIRIISNNLEQNC 392
>gi|72081002|ref|YP_288060.1| hypothetical protein MHP7448_0675 [Mycoplasma hyopneumoniae 7448]
Length = 872
Score = 42.0 bits (97), Expect = 0.039, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 39 IKKSINRVIQENNKPRNMTIFKTEVKRDIRRASRLSLEEKSKNADKPTVIENQADNINIE 98
++K N + ++N+ N +++ +++ SL+E N D T I N + ++IE
Sbjct: 265 MQKEANNLDEKNDNTINFKASINHLEKQVQKNLENSLQETQINQDISTTISNNPEKVDIE 324
Query: 99 VEVATNLNPNHQASEIDIAIENLP-DLKSNHQASEIDIAIENLPDLKSNHQASEIDIAIE 157
+E N Q +++D++ LP + QA I++EN DL S + +++I E
Sbjct: 325 LEAILE---NSQENKVDLS--ELPANFNDKDQAESHQISLEN-ADLTSTNSVEKLEIE-E 377
Query: 158 NLPDHQVDRNHTLSNLRGAC 177
+ + Q + +NL C
Sbjct: 378 KIQEKQSNIRIISNNLEQNC 397
>gi|312601630|gb|ADQ90885.1| Putative uncharacterized protein [Mycoplasma hyopneumoniae 168]
Length = 869
Score = 42.0 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 8/140 (5%)
Query: 39 IKKSINRVIQENNKPRNMTIFKTEVKRDIRRASRLSLEEKSKNADKPTVIENQADNINIE 98
++K N + ++N+ N ++ +++ SL+E N D T I N + ++IE
Sbjct: 260 MQKESNNLDEKNDNTINFKASINHLENQVQKNLENSLQETQINQDISTTISNNPEKVDIE 319
Query: 99 VEVATNLNPNHQASEIDIAIENLP-DLKSNHQASEIDIAIENLPDLKSNHQASEIDIAIE 157
+E N Q +++D++ LP + QA I+ EN DL S + +++I E
Sbjct: 320 LEAILE---NSQENKVDLS--ELPVNFNDKDQAENHQISFEN-TDLTSTNSVEKLEIE-E 372
Query: 158 NLPDHQVDRNHTLSNLRGAC 177
+ + Q D +NL C
Sbjct: 373 KIQEKQSDIRIISNNLEQNC 392
>gi|291231627|ref|XP_002735765.1| PREDICTED: small optic lobes-like [Saccoglossus kowalevskii]
Length = 1106
Score = 41.3 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 41/181 (22%), Positives = 71/181 (39%), Gaps = 35/181 (19%)
Query: 17 LSISSCDLGDSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFKTEVKRDIRRASRLSLE 76
LSI S L + K + GN K S +++ +P+ + + T+ RR + +
Sbjct: 154 LSIDSIRLSNEPTKNIDRFGNAQKTS--PIVKSPKRPKEIIVKPTDEVLPTRRLKAIKPK 211
Query: 77 EKSKNADKPTVIENQADNINIEVEVATNLNPN--------------------------HQ 110
++ KNA +P VI + + + NL +
Sbjct: 212 QELKNATEPVVIPSDIEPVVETASTLVNLTKDDGKYSGKACKVCKAPRIAKLKIPSTCQT 271
Query: 111 ASEIDIAIENLPDLKSNHQA-SEIDIAIENLPDLKSNHQASEIDIAIENLPDHQVDRNHT 169
S ID+ IEN ++ S H+ SE+D D+ S +D A+ N+ D + +H
Sbjct: 272 PSVIDVDIENSNNVLSEHKGTSEMDF------DVGSCKNERMLDNALNNMSDSKQCTDHN 325
Query: 170 L 170
L
Sbjct: 326 L 326
>gi|325478782|gb|EGC81893.1| DNA primase [Anaerococcus prevotii ACS-065-V-Col13]
Length = 543
Score = 40.5 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 37 NTIKKSINRVIQENNKPRNMTIFKTEVKRDIRRASR---LSLEEKSKNADKPTVIENQAD 93
++IK+ + R I NN + I K+ +K+ I R ++ L ++ K+ +KP ++EN+ +
Sbjct: 388 SSIKQELTREIFINNVSKLFEIDKSTLKQAIDRYNKDTDLKIKNNGKSYNKPIIVENKTN 447
Query: 94 NINI-EVEV 101
N NI E+EV
Sbjct: 448 NFNINELEV 456
>gi|54020658|ref|YP_116203.1| hypothetical protein mhp696 [Mycoplasma hyopneumoniae 232]
gi|53987831|gb|AAV28032.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 232]
Length = 867
Score = 39.3 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 11/159 (6%)
Query: 30 KKRNTIGNTIKKSINRVIQENNKPRNMTIFKTEVKRDIRRASRLSLEEKSKNADKPTVIE 89
KK NTI K SIN + + K ++ +T++ +DI ++ +S + + + ++E
Sbjct: 270 KKDNTI--RFKASINHLENQPEKNLENSLQETQINQDI--STTISNNPEKVDIELEAILE 325
Query: 90 NQADNINIEVEVATNLNPNHQASEIDIAIENLPDLKSNHQASEIDIAIENLPDLKSNHQA 149
N +N E+ N N QA I++EN DL S + +++I + K +
Sbjct: 326 NSQENKVDLSELPANFNDKDQAESHQISLEN-ADLTSTNSVEKLEI------EEKIQEKQ 378
Query: 150 SEIDIAIENLPDHQVDRNHTLSNLRGACYQPSLVSNSSL 188
S+I I NL + + + + Y+ ++ N+S
Sbjct: 379 SDIRIISNNLEQNCCPKQNAVEKEIEKTYEDNIEKNNSF 417
>gi|145504845|ref|XP_001438389.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405561|emb|CAK70992.1| unnamed protein product [Paramecium tetraurelia]
Length = 594
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 54 RNMTIFKTEVKRDIRRASRLSLEEKSKNADKPTVIENQADNINIEVEVATNLNPNHQASE 113
+N IFKT+ ++ +++ +S + + N+++ +++Q + E+ A L PN Q +
Sbjct: 314 QNGDIFKTQTEKQNQQSQFMSNLQNANNSNRNLFVQDQVSKLTYEIMAAQQLRPNQQ--Q 371
Query: 114 IDIAIENLPDLKSNHQASEID 134
I+ A++ L D N Q + D
Sbjct: 372 INNALQELQD---NEQIFKTD 389
>gi|242243001|ref|ZP_04797446.1| DNA segregation ATPase FtsK SpoIIIE family protein [Staphylococcus
epidermidis W23144]
gi|242233602|gb|EES35914.1| DNA segregation ATPase FtsK SpoIIIE family protein [Staphylococcus
epidermidis W23144]
Length = 1169
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 9/119 (7%)
Query: 71 SRLSLEEKSKNADKPTVIENQADNINIEVEVATNLNPNHQASEIDI-AIENLPDLKSNHQ 129
S L LE +S P +E Q ++ NI+ + N P+ EID+ A ++ +
Sbjct: 351 SSLDLENESNQDSSPNSLEKQTNSSNIDNKEVKNNAPSFNYEEIDLDATTDVYKVNEEET 410
Query: 130 ASEIDIAIENLPDLKSNHQASEIDIAIENLPDHQVDRNHTLSNLRGACYQPSLVSNSSL 188
S+ID E+L + SNH S D +E+ H++D N + + Q ++S+ S+
Sbjct: 411 ESKID---EDL--VSSNHYHSNDDSEVEDAEYHELDDNRQQNQSKS---QEDIISSESI 461
>gi|197927293|ref|NP_001128149.1| Werner syndrome ATP-dependent helicase [Pongo abelii]
gi|55726573|emb|CAH90053.1| hypothetical protein [Pongo abelii]
Length = 1486
Score = 39.0 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 19/138 (13%)
Query: 60 KTEVKRDIRRASRLSLEEKSKNADKPTVIENQADNINIEVEVATNLNPNHQASEIDIAIE 119
+ E DI S L + D VIE+ D +E+E+ +L+PN+ ++ IE
Sbjct: 410 QEEYLSDIAYKSTEHLSPNNNENDTSYVIESDED---LEMEMLKHLSPNNNENDTSYVIE 466
Query: 120 NLPDLK---------SNHQ-------ASEIDIAIENLPDLKSNHQASEIDIAIENLPDHQ 163
+ DL+ +N++ S+ D+ +E L L N+ ++ IE+ D +
Sbjct: 467 SDEDLEMEMLKHLSPNNNENDTSHVIESDEDLEMEMLKHLSPNNNENDTSHVIESDEDLE 526
Query: 164 VDRNHTLSNLRGACYQPS 181
++ +L NL +P+
Sbjct: 527 MEMLKSLENLNSGTVEPT 544
>gi|91216496|ref|ZP_01253462.1| putative protoporphyrinogen oxidase [Psychroflexus torquis ATCC
700755]
gi|91185290|gb|EAS71667.1| putative protoporphyrinogen oxidase [Psychroflexus torquis ATCC
700755]
Length = 281
Score = 39.0 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 35/73 (47%)
Query: 71 SRLSLEEKSKNADKPTVIENQADNINIEVEVATNLNPNHQASEIDIAIENLPDLKSNHQA 130
++L + S A K + ++ +N IE A L H EIDI + N P +K N QA
Sbjct: 140 AKLKALDISSEALKLAELNSEDNNTKIEYTQADLLTLKHLPEEIDIVVSNPPYVKFNEQA 199
Query: 131 SEIDIAIENLPDL 143
D ++N P L
Sbjct: 200 QMQDNVLKNEPHL 212
>gi|270008682|gb|EFA05130.1| hypothetical protein TcasGA2_TC015245 [Tribolium castaneum]
Length = 1314
Score = 39.0 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 82 ADKPTVIENQADNINIEVEVATNLNPNHQASEIDIAIENLPDLKSNHQASEIDIAIENLP 141
A+K T+ + ++++I + A N N+QAS ++ I P + NH+ +I I+ +NL
Sbjct: 597 ANKETINQGNRNSLDILINPA---NHNNQASHNNLDIPINPANQVNHKNRDILISPDNLV 653
Query: 142 DLKSNHQASEIDIAIENLPDHQVDRNHTLSNLRGACYQPSLVSNSS 187
+ S + D +ENL + + N L+NL Q +LVS +
Sbjct: 654 NQDSQDNHNNRDPQLENLNNRAIQDN--LNNLDNPVSQVNLVSQGN 697
>gi|238505954|ref|XP_002384179.1| histone-lysine N-methyltransferase (Ash1), putative [Aspergillus
flavus NRRL3357]
gi|220690293|gb|EED46643.1| histone-lysine N-methyltransferase (Ash1), putative [Aspergillus
flavus NRRL3357]
Length = 789
Score = 38.6 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 10/66 (15%)
Query: 19 ISSCDLGDSIAKKRNTIGNTIKKSINRVIQEN---NKPRNMTIFKTEVKRDIRRASRLSL 75
+ + D+G S+ ++ T++K + R++ E NK + +T+ E+K +RR+SRLSL
Sbjct: 135 LQASDMGTSLQQR------TLRKRVERILTEEGHGNKGK-VTVTAKEIKSPVRRSSRLSL 187
Query: 76 EEKSKN 81
EK+ +
Sbjct: 188 LEKASD 193
>gi|83773210|dbj|BAE63337.1| unnamed protein product [Aspergillus oryzae]
Length = 506
Score = 38.6 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 10/66 (15%)
Query: 19 ISSCDLGDSIAKKRNTIGNTIKKSINRVIQEN---NKPRNMTIFKTEVKRDIRRASRLSL 75
+ + D+G S+ ++ T++K + R++ E NK + +T+ E+K +RR+SRLSL
Sbjct: 135 LQASDMGTSLQQR------TLRKRVERILTEEGHGNKGK-VTVTAKEIKSPVRRSSRLSL 187
Query: 76 EEKSKN 81
EK+ +
Sbjct: 188 LEKASD 193
>gi|317151143|ref|XP_001824470.2| histone-lysine N-methyltransferase (Ash1) [Aspergillus oryzae
RIB40]
Length = 796
Score = 38.6 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 10/66 (15%)
Query: 19 ISSCDLGDSIAKKRNTIGNTIKKSINRVIQEN---NKPRNMTIFKTEVKRDIRRASRLSL 75
+ + D+G S+ ++ T++K + R++ E NK + +T+ E+K +RR+SRLSL
Sbjct: 167 LQASDMGTSLQQR------TLRKRVERILTEEGHGNKGK-VTVTAKEIKSPVRRSSRLSL 219
Query: 76 EEKSKN 81
EK+ +
Sbjct: 220 LEKASD 225
>gi|55820338|ref|YP_138780.1| aminodeoxychorismate lyase [Streptococcus thermophilus LMG 18311]
gi|55736323|gb|AAV59965.1| aminodeoxychorismate lyase [Streptococcus thermophilus LMG 18311]
Length = 658
Score = 38.6 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Query: 59 FKTEVKRDIRRASRL-SL--EEKSKNADKP-TVIENQADNINIEVEVATNLNPNHQASEI 114
FK ++ RD++ A+RL SL EE K+A P T + AD+ I+ A+N N S
Sbjct: 18 FKNQILRDLQEATRLRSLREEEHKKSAAVPETPLSMSADSHAIDSGSASNKVSNQNLSSH 77
Query: 115 DIAIENLPDLKSNHQASEIDIAIENLPDLKSNHQASEIDIAIENLPDHQVDRNHTLS 171
+A + ++ + +++ + +++ A ++ + + P QVD+ LS
Sbjct: 78 SVAHSAIAKTMTSETVRDFQYSVDLSSNSQADSSAPDVHSNVISSPKEQVDKEKNLS 134
>gi|312277653|gb|ADQ62310.1| Aminodeoxychorismate lyase [Streptococcus thermophilus ND03]
Length = 658
Score = 38.2 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Query: 59 FKTEVKRDIRRASRL-SL--EEKSKNADKP-TVIENQADNINIEVEVATNLNPNHQASEI 114
FK ++ RD++ A+RL SL EE K+A P T + AD+ I+ A+N N S
Sbjct: 18 FKNQILRDLQEATRLRSLREEEHKKSAAVPETPLSMSADSHAIDSGSASNKVSNQNLSSH 77
Query: 115 DIAIENLPDLKSNHQASEIDIAIENLPDLKSNHQASEIDIAIENLPDHQVDRNHTLS 171
+A + ++ + +++ + +++ A ++ + + P QVD+ LS
Sbjct: 78 SVAHSAIAKTMTSETVRDFQYSVDLSSNSQADSSAPDVHSNVISSPKEQVDKEKNLS 134
>gi|55822229|ref|YP_140670.1| aminodeoxychorismate lyase [Streptococcus thermophilus CNRZ1066]
gi|55738214|gb|AAV61855.1| aminodeoxychorismate lyase [Streptococcus thermophilus CNRZ1066]
Length = 658
Score = 38.2 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Query: 59 FKTEVKRDIRRASRL-SL--EEKSKNADKP-TVIENQADNINIEVEVATNLNPNHQASEI 114
FK ++ RD++ A+RL SL EE K+A P T + AD+ I+ A+N N S
Sbjct: 18 FKNQILRDLQEATRLRSLREEEHKKSAAVPETPLSMSADSHAIDSGSASNKVSNQNLSSH 77
Query: 115 DIAIENLPDLKSNHQASEIDIAIENLPDLKSNHQASEIDIAIENLPDHQVDRNHTLS 171
+A + ++ + +++ + +++ A ++ + + P QVD+ LS
Sbjct: 78 SVAHSAIAKTMTSETVRDFQYSVDLSSNSQADSSAPDVHSNVISSPKEQVDKEKNLS 134
>gi|116627174|ref|YP_819793.1| aminodeoxychorismate lyase [Streptococcus thermophilus LMD-9]
gi|116100451|gb|ABJ65597.1| Predicted periplasmic solute-binding protein [Streptococcus
thermophilus LMD-9]
Length = 658
Score = 38.2 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Query: 59 FKTEVKRDIRRASRL-SL--EEKSKNADKP-TVIENQADNINIEVEVATNLNPNHQASEI 114
FK ++ RD++ A+RL SL EE K+A P T + AD+ I+ A+N N S
Sbjct: 18 FKNQILRDLQEATRLRSLREEEHKKSAAVPETPLSMSADSHAIDSGSASNKVSNQNLSSH 77
Query: 115 DIAIENLPDLKSNHQASEIDIAIENLPDLKSNHQASEIDIAIENLPDHQVDRNHTLS 171
+A + ++ + +++ + +++ A ++ + + P QVD+ LS
Sbjct: 78 SVAHSAIAKTMTSETVRDFQYSVDLSSNSQADSSAPDVHSNVISSPKEQVDKEKNLS 134
>gi|436320|emb|CAA49309.1| p93 [Borrelia burgdorferi]
Length = 663
Score = 38.2 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 26 DSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFKTEVKRDIR-RASRLSLEEKSKNADK 84
D++ +R+T+ ++++IN +E N P+ + +V + ++ + S L+E+ K A
Sbjct: 314 DNLDIQRDTVREKLQENINETNKEKNLPKPGDVSSPKVDKQLQIKESLEDLQEQLKEASD 373
Query: 85 PTVIENQADNINIEVEVATN-----LNPNHQASEIDIAIENLPDLKSNHQASEIDIAIEN 139
ENQ I ++E+ N N +H+A ++ + + K + E D +++
Sbjct: 374 ----ENQKREIEKQIEIKKNDEELFKNKDHKALDLKQELNSKASSKEKIEGEEEDKELDS 429
Query: 140 LPDLKSNHQASEID 153
+L+ +A ++D
Sbjct: 430 KKNLEPVSEADKVD 443
>gi|111115573|ref|YP_710191.1| antigen, p83/100 [Borrelia afzelii PKo]
gi|436324|emb|CAA49311.1| p93 [Borrelia burgdorferi]
gi|110890847|gb|ABH02015.1| antigen, p83/100 [Borrelia afzelii PKo]
Length = 663
Score = 37.8 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 26 DSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFKTEVKRDIR-RASRLSLEEKSKNADK 84
D++ +R+T+ ++++IN +E N P+ + +V + ++ + S L+E+ K A
Sbjct: 314 DNLDIQRDTVREKLQENINETNKEKNLPKPGDVSSPKVDKQLQIKESLEDLQEQLKEASD 373
Query: 85 PTVIENQADNINIEVEVATN-----LNPNHQASEIDIAIENLPDLKSNHQASEIDIAIEN 139
ENQ I ++E+ N N +H+A ++ + + K + E D +++
Sbjct: 374 ----ENQKREIEKQIEIKKNDEELFKNKDHKALDLKQELNSKASSKEKIEGEEEDKELDS 429
Query: 140 LPDLKSNHQASEID 153
+L+ +A ++D
Sbjct: 430 KKNLEPVSEADKVD 443
>gi|436406|emb|CAA50521.1| p100 protein [Borrelia burgdorferi]
Length = 663
Score = 37.8 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 26 DSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFKTEVKRDIR-RASRLSLEEKSKNADK 84
D++ +R+T+ ++++IN +E N P+ + +V + ++ + S L+E+ K A
Sbjct: 314 DNLDIQRDTVREKLQENINETNKEKNLPKPGDVSSPKVDKQLQIKESLEDLQEQLKEASD 373
Query: 85 PTVIENQADNINIEVEVATN-----LNPNHQASEIDIAIENLPDLKSNHQASEIDIAIEN 139
ENQ I ++E+ N N +H+A ++ + + K + E D +++
Sbjct: 374 ----ENQKREIEKQIEIKKNDEELFKNKDHKALDLKQELNSKASSKEKIEGEEEDKELDS 429
Query: 140 LPDLKSNHQASEID 153
+L+ +A ++D
Sbjct: 430 KKNLEPVSEADKVD 443
>gi|30020980|ref|NP_832611.1| peptidylprolyl isomerase [Bacillus cereus ATCC 14579]
gi|46396822|sp|Q81CB1|PRSA4_BACCR RecName: Full=Foldase protein prsA 4; Flags: Precursor
gi|29896533|gb|AAP09812.1| Protein export protein prsA precursor [Bacillus cereus ATCC 14579]
Length = 280
Score = 37.8 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 71/147 (48%), Gaps = 8/147 (5%)
Query: 1 MKSKNILIVSTLVICVLSISSCDLGDSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFK 60
MK K ++I S L+ LS+S+C D+I ++ G+ + N+ ++EN +N++ +
Sbjct: 1 MKRKKLVIGSILMGMTLSLSACGSSDNIVTTKS--GSISESDFNKKLKENYGKQNLS--E 56
Query: 61 TEVKRDIRRASRLSLEEKSKNADKPTVIENQADNINIEVEVATNLNPNHQASEIDIAIEN 120
V++ + +++ EE +K ++ + + DN N +E N + ++ +
Sbjct: 57 MVVEKVLHDKYKVTDEEVTKQLEE--LKDKMGDNFNTYMESNGVKNEDQLKEKLKLTFAF 114
Query: 121 LPDLKSNHQASEIDIAIENLPDLKSNH 147
+K+ +E DI P L+ +H
Sbjct: 115 EKAIKAT--VTEKDIKDHYKPKLQVSH 139
>gi|319401049|gb|EFV89268.1| ftsK/SpoIIIE family protein [Staphylococcus epidermidis FRI909]
Length = 1169
Score = 37.8 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 71 SRLSLEEKSKNADKPTVIENQADNINIEVEVATNLNPNHQASEIDIAI-ENLPDLKSNHQ 129
S L LE +S P E Q ++ +I+ + A N P+ EID+ + ++ +
Sbjct: 351 SSLDLENESNQDSSPNSFEKQTNSSDIDNKEAKNNAPSFNYEEIDLDVTSDVYKVNEEET 410
Query: 130 ASEIDIAIENLPDLKSNHQASEIDIAIENLPDHQVDRNHTLSNLRGACYQPSLVSNSSL 188
S+ID E+L + SNH S D +E+ H++D N + + Q +++S+ S+
Sbjct: 411 ESKID---EDL--VSSNHYHSNDDSEVEDAEYHELDDNRQQNQSKS---QENIISSESI 461
>gi|115343115|gb|ABI94554.1| p83/100 [Borrelia afzelii]
Length = 663
Score = 37.8 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 26 DSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFKTEVKRDIR-RASRLSLEEKSKNADK 84
D++ +R+T+ ++++IN +E N P+ + +V + ++ + S L+E+ K A
Sbjct: 314 DNLDIQRDTVREKLQENINETNKEKNLPKPGDVSSPKVDKQLQIKESLEDLQEQLKEASD 373
Query: 85 PTVIENQADNINIEVEVATN-----LNPNHQASEIDIAIENLPDLKSNHQASEIDIAIEN 139
ENQ I ++E+ N N +H+A ++ + + K + E D +++
Sbjct: 374 ----ENQKREIEKQIEIKKNDEELLKNKDHKALDLKQELNSKASSKEKIEGEEEDKELDS 429
Query: 140 LPDLKSNHQASEID 153
+L+ +A ++D
Sbjct: 430 KKNLEPVSEADKVD 443
>gi|115343131|gb|ABI94562.1| p83/100 [Borrelia afzelii]
gi|187235687|gb|ACD02012.1| p83/100 [Borrelia afzelii]
Length = 663
Score = 37.8 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 26 DSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFKTEVKRDIR-RASRLSLEEKSKNADK 84
D++ +R+T+ ++++IN +E N P+ + +V + ++ + S L+E+ K A
Sbjct: 314 DNLDIQRDTVREKLQENINETNKEKNLPKPGDVSSPKVDKQLQIKESLEDLQEQLKEASD 373
Query: 85 PTVIENQADNINIEVEVATN-----LNPNHQASEIDIAIENLPDLKSNHQASEIDIAIEN 139
ENQ I ++E+ N N +H+A ++ + + K + E D +++
Sbjct: 374 ----ENQKREIEKQIEIKKNDEELLKNKDHKALDLKQELNSKASSKEKIEGEEEDKELDS 429
Query: 140 LPDLKSNHQASEID 153
+L+ +A ++D
Sbjct: 430 KKNLEPVSEADKVD 443
>gi|18407365|ref|NP_564786.1| PPR336 (pentatricopeptide repeat 336) [Arabidopsis thaliana]
gi|193806489|sp|Q8LE47|PPR87_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g61870, mitochondrial; AltName: Full=Protein
PENTATRICOPEPTIDE REPEAT 336; Flags: Precursor
gi|16226403|gb|AAL16159.1|AF428391_1 At1g61870/F8K4_8 [Arabidopsis thaliana]
gi|3367521|gb|AAC28506.1| Similar to gb|U08285 membrane-associated salt-inducible protein
from Nicotiana tabacum. ESTs gb|T44131 and gb|T04378
come from this gene [Arabidopsis thaliana]
gi|17065564|gb|AAL32936.1| Unknown protein [Arabidopsis thaliana]
gi|32815835|gb|AAP88326.1| At1g61870 [Arabidopsis thaliana]
gi|332195777|gb|AEE33898.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 408
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 42 SINRVIQENNKPRNMTIFKTEVKRDIRRASRLSLEEKSKNADKPTVIENQADNINIEVEV 101
S+ R + + + R+++ T + D + + L+ +EKSK A E D I +E+
Sbjct: 12 SLFRHLNASPQIRSLSSASTILSPDSK--TPLTSKEKSKAALSLLKSEKDPDRI-LEICR 68
Query: 102 ATNLNPNHQASEI--DIAIENLPDLKSNHQASEI-DIAIENLPDLKSNHQASEIDI--AI 156
A +L P+ + I A+ENL + K S + D IEN PDLKS A+ + A
Sbjct: 69 AASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQ 128
Query: 157 ENLPDHQV 164
N+ DH +
Sbjct: 129 ANMLDHSL 136
>gi|115343125|gb|ABI94559.1| p83/100 [Borrelia afzelii]
Length = 663
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 26 DSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFKTEVKRDIR-RASRLSLEEKSKNADK 84
D++ +R+T+ ++++IN +E N P+ + +V + ++ + S L+E+ K A
Sbjct: 314 DNLDIQRDTVREKLQENINETNKEKNLPKPGDVSSPKVDKQLQIKESLEDLQEQLKEASD 373
Query: 85 PTVIENQADNINIEVEVATN-----LNPNHQASEIDIAIENLPDLKSNHQASEIDIAIEN 139
ENQ I ++E+ N N +H+A ++ + + K + E D +++
Sbjct: 374 ----ENQKREIEKQIEIKKNDEELLKNKDHKALDLKQELNSKASSKEKIEGEEEDKELDS 429
Query: 140 LPDLKSNHQASEID 153
+L+ +A ++D
Sbjct: 430 KKNLEPVSEADKVD 443
>gi|115343129|gb|ABI94561.1| p83/100 [Borrelia afzelii]
Length = 663
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 26 DSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFKTEVKRDIR-RASRLSLEEKSKNADK 84
D++ +R+T+ ++++IN +E N P+ + +V + ++ + S L+E+ K A
Sbjct: 314 DNLDIQRDTVREKLQENINETNKEKNLPKPGDVSSPKVDKQLQIKESLEDLQEQLKEASD 373
Query: 85 PTVIENQADNINIEVEVATN-----LNPNHQASEIDIAIENLPDLKSNHQASEIDIAIEN 139
ENQ I ++E+ N N +H+A ++ + + K + E D +++
Sbjct: 374 ----ENQKREIEKQIEIKKNDEELLKNKDHKALDLKQELNSKASSKEKIEGEEEDKELDS 429
Query: 140 LPDLKSNHQASEID 153
+L+ +A ++D
Sbjct: 430 KKNLEPVSEADKVD 443
>gi|307149706|ref|YP_003891014.1| hypothetical protein Cyan7822_6704 [Cyanothece sp. PCC 7822]
gi|306986772|gb|ADN18649.1| hypothetical protein Cyan7822_6704 [Cyanothece sp. PCC 7822]
Length = 415
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 28 IAKKRNTIGNTIKKSINRVIQENNKPRNMTIFKTEVKRDIRRASRLSLEEKSKNADKPTV 87
+ ++ TI NT+K+ +N I E P + I +V ++I++A + +L+E+ KN P V
Sbjct: 145 LKNQQTTIENTVKQQLNDKIPE---PIKVEILMEQVSKNIKQAVKENLDEQFKNI-IPLV 200
Query: 88 IENQADN 94
I+N D+
Sbjct: 201 IKNLKDD 207
>gi|115343123|gb|ABI94558.1| p83/100 [Borrelia afzelii]
Length = 663
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 26 DSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFKTEVKRDIR-RASRLSLEEKSKNADK 84
D++ +R+T+ ++++IN +E N P+ + +V + ++ + S L+E+ K A
Sbjct: 314 DNLDIQRDTVREKLQENINETNKEKNLPKPGDVSSPKVDKQLQIKESLEDLQEQLKEASD 373
Query: 85 PTVIENQADNINIEVEVATN-----LNPNHQASEIDIAIENLPDLKSNHQASEIDIAIEN 139
ENQ I ++E+ N N +H+A ++ + + K + E D +++
Sbjct: 374 ----ENQKREIEKQIEIKKNDEELLKNKDHKALDLKQELNSKASSKEKIEGEEEDKELDS 429
Query: 140 LPDLKSNHQASEID 153
+L+ +A ++D
Sbjct: 430 KKNLEPVSEADKVD 443
>gi|242016412|ref|XP_002428815.1| dynein heavy chain, cytosolic, putative [Pediculus humanus corporis]
gi|212513512|gb|EEB16077.1| dynein heavy chain, cytosolic, putative [Pediculus humanus corporis]
Length = 4502
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 66/129 (51%), Gaps = 15/129 (11%)
Query: 65 RDIRRASRLSLEEKSKNADKPTVIENQADNINIEVEVATNLNPNHQASEIDIAIENLPDL 124
+ IR+ +++ +E SK+ +IE + + +E+ +N A+ +++ IE L
Sbjct: 1372 QQIRKIAKVDFDETSKDFTLEAIIEMKLQDFALEINEISN------AATMELNIE--AGL 1423
Query: 125 KSNHQA-SEIDIAIENLPDLKSNHQASEIDIAIENLPDHQVDRNHTLSNLRGACYQPSLV 183
KS + +E+++ ++N D+K+ ++ +D + L +H + L++++G + +
Sbjct: 1424 KSISEFWAEVNVTMDNYKDIKNLYRLKAVDDIFQTLEEHMIQ----LASMKGTKFSEPFM 1479
Query: 184 SNSSLKLWD 192
+ + W+
Sbjct: 1480 QD--IDYWE 1486
>gi|328772819|gb|EGF82857.1| hypothetical protein BATDEDRAFT_23083 [Batrachochytrium dendrobatidis
JAM81]
Length = 3415
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 9/148 (6%)
Query: 33 NTIGNTIKKSINRVIQENNKPRNMTIFKTEVKRDIRRASRLSLEEKSKNADKPTVIENQA 92
NTI +++ + + N+ +N + + + R+ R L E S + T +
Sbjct: 902 NTIDTKLEELKAKRSADPNEQKNFE-YSSTLNRN-----RPLLAEDSSTLLRLTTLHGNT 955
Query: 93 DNINIEVEVATNLNPNHQASEIDIAIENLPDLKSNHQASEIDIAIENLPDLKSNHQASEI 152
N + P + SE D PD +S H ++++ N PD HQ I
Sbjct: 956 RNTLQRKKAVQQTEPIQEESESDFVYPAFPDSESFHHKR--NLSVSNAPDEAQKHQTVRI 1013
Query: 153 DIAIENLPDHQVDRNHTLSNLRGACYQP 180
+EN ++ + H +L G+ +P
Sbjct: 1014 ITIMENC-GQELLKKHFFDSLVGSSARP 1040
>gi|315022680|gb|EFT35705.1| sensor histidine kinase [Riemerella anatipestifer RA-YM]
Length = 386
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 18/137 (13%)
Query: 56 MTIFKTEVKRDIRRASRLSLEEKSKNADKPTVIENQADNINIEVE---VATNLN-----P 107
+ I+ V +D+R+ ++ +K A + ENQ D +E+ + TN N
Sbjct: 27 LIIYSVVVVKDLRQKETANMAVFAK-AMRFLQDENQGDVRMLELVQEIITTNDNIPIIVT 85
Query: 108 NHQASEIDIAIENLPD-LKSNHQASEIDIAIENLPDLKSNHQASEIDIAIENLPDHQVDR 166
NHQ I I+N+PD +K N +A ++ L ++K + E+ I+ N+ D
Sbjct: 86 NHQGEPIKEFIKNIPDKIKDNPKALKV-----RLEEMKEGYPPFELQISEGNVQYLYFDN 140
Query: 167 NHTLSNLRGACYQPSLV 183
+ ++NLR Y P+L+
Sbjct: 141 SDLMNNLR---YYPALL 154
>gi|312864057|ref|ZP_07724293.1| YceG family protein [Streptococcus vestibularis F0396]
gi|322517499|ref|ZP_08070371.1| aminodeoxychorismate lyase [Streptococcus vestibularis ATCC 49124]
gi|311100470|gb|EFQ58677.1| YceG family protein [Streptococcus vestibularis F0396]
gi|322123875|gb|EFX95438.1| aminodeoxychorismate lyase [Streptococcus vestibularis ATCC 49124]
Length = 657
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 12/120 (10%)
Query: 59 FKTEVKRDIRRASRL-SL--EEKSKNADKP-TVIENQADNINIEVEVATNLNPNHQASEI 114
FK ++ RD++ A+RL SL EE K+A P T + AD+ I+ A+N N S
Sbjct: 18 FKNQILRDLQEATRLRSLREEEHKKSATMPETPLSMSADSHAIDSGSASNKVSNQNLSSH 77
Query: 115 DIAIENLPDLKSNHQASEIDIAIENLPDLKSNHQASEIDIAIEN----LPDHQVDRNHTL 170
+A + ++ A + ++ DL SN QA + + + P QVD+ L
Sbjct: 78 SVAHSAIVKTMTSETARDFQDSV----DLSSNSQADSLAPNVHSNVISSPKEQVDKEKNL 133
>gi|324505702|gb|ADY42446.1| Moesin/ezrin/radixin 1 [Ascaris suum]
Length = 567
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 69/153 (45%), Gaps = 10/153 (6%)
Query: 30 KKRNTIGNTIKKSINRVIQENNKPRNMTIFKTEVKRDIRRASRLSLEEKSKNADKPTVIE 89
++RN + + I++ +V + + T +KR++ A+RL E++++ A TV E
Sbjct: 407 EERNRLVSEIREREMQVAEMREQVDAKTAETNRLKREVEEAARLRREQEAQQAHALTVKE 466
Query: 90 NQAD-----NINIEVEVATNLNPNHQASEIDIAIENLPDLKSNHQASEIDIAIENLPDLK 144
D N ++ E+ + N E+D ++ H+ + +E + D +
Sbjct: 467 VDLDEELNENAHVHTELTARGDENVPQRELDRMTATEQNISLKHKLEALTADLEAVKDAQ 526
Query: 145 SNHQASEIDIA-IENLPDHQVDRNHTLSNLRGA 176
Q +E D+ +EN + D+ TL +RG
Sbjct: 527 ---QVTEYDLLHMENKRAGR-DKYKTLRQIRGG 555
>gi|311267326|ref|XP_003131510.1| PREDICTED: keratin, type I cytoskeletal 20-like [Sus scrofa]
Length = 430
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 16/159 (10%)
Query: 15 CVLSISSCDLGDSIAKKRNTIGNTIKKSINRVIQE-NNKPRNMTIFKTEVKRDIRRASR- 72
CVL I + L + + I+ ++ +Q +N ++T+ KT+++ I ++
Sbjct: 147 CVLQIDNAKLAAEDFRLKYETERGIRLAVEADLQGLHNVFDDLTLTKTDLEIQIEELNKD 206
Query: 73 LSLEEKSKNADKPTVIENQADNINIEVEVATNLNPNHQASEID-----IAIENLPDLKSN 127
L+L +K + ++ + +N+N+EV+ A +LN + SE+ +A ENL K
Sbjct: 207 LALLQKEHEEEVQSLRAHLGNNVNVEVDAAPSLNLSAIMSEMRQKYEAMAQENLQKAKEQ 266
Query: 128 HQ------ASEIDIAIENLPDLK---SNHQASEIDIAIE 157
Q E+ ++ E L K NH+ + + IE
Sbjct: 267 FQLQIETLQQEVTVSTEELKGAKDEVKNHRRTYQSLEIE 305
>gi|189238229|ref|XP_971219.2| PREDICTED: similar to AGAP004367-PA [Tribolium castaneum]
Length = 1458
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 106 NPNHQASEIDIAIENLPDLKSNHQASEIDIAIENLPDLKSNHQASEIDIAIENLPDHQVD 165
N N+QAS ++ I P + NH+ +I I+ +NL + S + D +ENL + +
Sbjct: 666 NHNNQASHNNLDIPINPANQVNHKNRDILISPDNLVNQDSQDNHNNRDPQLENLNNRAIQ 725
Query: 166 RNHTLSNLRGACYQPSLVSNSS 187
N L+NL Q +LVS +
Sbjct: 726 DN--LNNLDNPVSQVNLVSQGN 745
>gi|115343121|gb|ABI94557.1| p83/100 [Borrelia afzelii]
Length = 663
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 26 DSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFKTEVKRDIR-RASRLSLEEKSKNADK 84
D++ +R+T+ ++++IN +E N P+ + +V + ++ + S L+E+ K A
Sbjct: 314 DNLDIQRDTVREKLQENINETNKEKNLPKPGDVSSPKVDKQLQIKESLEDLQEQLKEASD 373
Query: 85 PTVIENQADNINIEVEVATN-----LNPNHQASEIDIAIENLPDLKSNHQASEIDIAIEN 139
ENQ I ++E+ N N +H+A ++ + + K + E D +++
Sbjct: 374 ----ENQKREIEKQIEIKKNDEELLKNKDHKAFDLKQELNSKASSKEKIEGEEEDKELDS 429
Query: 140 LPDLKSNHQASEID 153
L+ +A ++D
Sbjct: 430 KKKLEPVSEADKVD 443
>gi|115343113|gb|ABI94553.1| p83/100 [Borrelia afzelii]
Length = 663
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 26 DSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFKTEVKRDIR-RASRLSLEEKSKNADK 84
D++ +R+T+ ++++IN +E N P+ + +V + ++ + S L+E+ K A
Sbjct: 314 DNLDIQRDTVREKLQENINETNKEKNLPKPGDVSSPKVDKQLQIKESLEDLQEQLKEASD 373
Query: 85 PTVIENQADNINIEVEVATN-----LNPNHQASEIDIAIENLPDLKSNHQASEIDIAIEN 139
ENQ I ++E+ N N +H+A ++ + + K + E D +++
Sbjct: 374 ----ENQKREIEKQIEIKKNDEELLKNKDHKALDLKQELNSKASSKEKIEGEEEDKELDS 429
Query: 140 LPDLKSNHQASEID 153
L+ +A ++D
Sbjct: 430 KKKLEPVSEADKVD 443
>gi|17568261|ref|NP_508118.1| hypothetical protein F57C12.2 [Caenorhabditis elegans]
gi|14916336|gb|AAA83296.2| Hypothetical protein F57C12.2 [Caenorhabditis elegans]
Length = 556
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 40 KKSINRVIQENNKPRNMTIFKTEVKRDIRRASRLSLEEKSKNADKPTVIENQADNINIEV 99
K+++ + E N P+ + TE + SLE +SK +D T IENQ IN
Sbjct: 62 KQNLETQLSEKNSPKTPNV--TE--------NMWSLEYESKLSDAKTKIENQKKEINKLN 111
Query: 100 EVATNLNPNHQASEIDIAIENLPDLKSNHQASEIDIAIENL 140
E T L Q S ++ N D+++ ++ +E+ EN+
Sbjct: 112 EKVTQLKEEQQNSN-QLSKNNESDMRNENRLAEVRKVQENV 151
>gi|229128201|ref|ZP_04257182.1| Foldase protein prsA 1 [Bacillus cereus BDRD-Cer4]
gi|228655060|gb|EEL10917.1| Foldase protein prsA 1 [Bacillus cereus BDRD-Cer4]
Length = 303
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 71/147 (48%), Gaps = 8/147 (5%)
Query: 1 MKSKNILIVSTLVICVLSISSCDLGDSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFK 60
+K K ++I S L+ LS+S+C D+I ++ G+ + N+ ++EN +N++ +
Sbjct: 24 LKRKKLVIGSILMGMTLSLSACGSSDNIVTTKS--GSISESDFNKKLKENYGKQNLS--E 79
Query: 61 TEVKRDIRRASRLSLEEKSKNADKPTVIENQADNINIEVEVATNLNPNHQASEIDIAIEN 120
V++ + +++ EE +K ++ + + DN N +E N + ++ +
Sbjct: 80 MVVEKVLHDKYKVTDEEVTKQLEE--LKDKMGDNFNTYMESNGVKNEDQLKEKLKLTFAF 137
Query: 121 LPDLKSNHQASEIDIAIENLPDLKSNH 147
+K+ +E DI P L+ +H
Sbjct: 138 EKAIKAT--VTEKDIKDHYKPKLQVSH 162
>gi|115343119|gb|ABI94556.1| p83/100 [Borrelia afzelii]
Length = 663
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 26 DSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFKTEVKRDIR-RASRLSLEEKSKNADK 84
D++ +R+T+ ++++IN +E N P+ + +V + ++ + S L+E+ K A
Sbjct: 314 DNLDIQRDTVREKLQENINETNKEKNLPKPGDVSSPKVDKQLQIKESLEDLQEQLKEASD 373
Query: 85 PTVIENQADNINIEVEVATN-----LNPNHQASEIDIAIENLPDLKSNHQASEIDIAIEN 139
ENQ I ++E+ N N +H+A ++ + + K + E D +++
Sbjct: 374 ----ENQKREIEKQIEIKKNDEELLKNKDHKALDLKQELNSKASSKEKIEGEEEDKELDS 429
Query: 140 LPDLKSNHQASEID 153
L+ +A ++D
Sbjct: 430 KKKLEPVSEADKVD 443
>gi|115343117|gb|ABI94555.1| p83/100 [Borrelia afzelii]
Length = 663
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 26 DSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFKTEVKRDIR-RASRLSLEEKSKNADK 84
D++ +R+T+ ++++IN +E N P+ + +V + ++ + S L+E+ K A
Sbjct: 314 DNLDIQRDTVREKLQENINETNKEKNLPKPGDVSSPKVDKQLQIKESLEDLQEQLKEASD 373
Query: 85 PTVIENQADNINIEVEVATN-----LNPNHQASEIDIAIENLPDLKSNHQASEIDIAIEN 139
ENQ I ++E+ N N +H+A ++ + + K + E D +++
Sbjct: 374 ----ENQKREIEKQIEIKKNDEELLKNKDHKALDLKQELNSKASSKEKIEGEEEDKELDS 429
Query: 140 LPDLKSNHQASEID 153
L+ +A ++D
Sbjct: 430 KKKLEPVSEADKVD 443
>gi|218234193|ref|YP_002367583.1| peptidylprolyl isomerase [Bacillus cereus B4264]
gi|218162150|gb|ACK62142.1| foldase protein PrsA [Bacillus cereus B4264]
Length = 280
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 1 MKSKNILIVSTLVICVLSISSCDLGDSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFK 60
MK K ++I S L+ LS+S+C D+I ++ G+ + N+ ++EN +N++ +
Sbjct: 1 MKRKKLVIGSILMGMTLSLSACGSSDNIVTTKS--GSISESDFNKKLKENYGKQNLS--E 56
Query: 61 TEVKRDIRRASRLSLEEKSKNADKPTVIENQADNINIEVEVATNLNPNHQASEIDIAIEN 120
V++ + +++ EE +K + + + DN N +E N + ++ +
Sbjct: 57 MVVEKVLHDKYKVTDEEVTKQLKE--LKDKMGDNFNTYMESNGVKNEDQLKEKLKLTFAF 114
Query: 121 LPDLKSNHQASEIDIAIENLPDLKSNH 147
+K+ +E DI P L+ +H
Sbjct: 115 EKAIKAT--VTEKDIKDHYKPKLQVSH 139
>gi|64420477|gb|AAY41418.1| P83/100 [Borrelia afzelii]
Length = 663
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 26 DSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFKTEVKRDIR-RASRLSLEEKSKNADK 84
D++ +R+T+ ++++IN +E N P+ + +V + ++ + S L+E+ K A
Sbjct: 314 DNLDIQRDTVREKLQENINETNKEKNLPKPGDVSSPKVDKQLQIKESLEDLQEQLKEASD 373
Query: 85 PTVIENQADNINIEVEVATN-----LNPNHQASEIDIAIENLPDLKSNHQASEIDIAIEN 139
ENQ I ++E+ N N +H+A ++ + + K + E D +++
Sbjct: 374 ----ENQKREIEKQIEIKKNDEELLKNKDHKALDLKQELNSKASSKEKIEGEEEDKELDS 429
Query: 140 LPDLKSNHQASEID 153
L+ +A ++D
Sbjct: 430 KKKLEPVSEADKVD 443
>gi|221059932|ref|XP_002260611.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium
knowlesi strain H]
gi|193810685|emb|CAQ42583.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium
knowlesi strain H]
Length = 972
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 20 SSCDLGDSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFKTEVKRDIRRASRLSLEEKS 79
S+ ++ I K++N I + K I RV + N + E + ++ +S++E+S
Sbjct: 738 SANEMNKVILKRKNFIDRVVTKIIKRVNITGTRNTNKKGKREEESTSQKGSNTMSVKEES 797
Query: 80 KNADKPTVIENQADNINIEVEVATNLNPNH 109
N DK EN+ + NI E++ N + +H
Sbjct: 798 -NTDKVHSDENEKRDFNIYSELSQNFSQHH 826
>gi|296004640|ref|XP_966085.2| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
gi|225631726|emb|CAG25337.2| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
Length = 1034
Score = 36.6 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 85 PTVIENQADNINIEVEVATNLNPNHQASEIDIAIENLPDLKSN 127
P +I+ +N N+++E+ T NP H +++I IEN+ SN
Sbjct: 621 PLIIQKTNENFNLQIELNTKNNPRHVIKKMNINIENILLTNSN 663
>gi|123457285|ref|XP_001316371.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121899075|gb|EAY04148.1| hypothetical protein TVAG_125880 [Trichomonas vaginalis G3]
Length = 624
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 31/134 (23%)
Query: 27 SIAKKRN-------TIGNTIKKSINRVIQENNKPRNMTIFKTEVKRDIRRASRLSLEEKS 79
S+AK++N TI N + +NR ++ N + M E RD+ + ++LE+
Sbjct: 23 SLAKEKNIMIRELMTIFNDFDEKLNRTLKNNAMKQEML----EKGRDLLKKQTVTLEDAK 78
Query: 80 KNADKPTVIENQADNINIEVEVATNL----------NPNHQASEIDIAIENLPDLKSNHQ 129
+ +D + E + IN E ++A+ + PN+Q S+ID KS +
Sbjct: 79 RKSDIIKIAEQNTNPINNE-KLASQILALEKEIKRYTPNYQTSKID---------KSKNC 128
Query: 130 ASEIDIAIENLPDL 143
ID ++ L DL
Sbjct: 129 LYLIDTKLKRLEDL 142
>gi|242041405|ref|XP_002468097.1| hypothetical protein SORBIDRAFT_01g039530 [Sorghum bicolor]
gi|241921951|gb|EER95095.1| hypothetical protein SORBIDRAFT_01g039530 [Sorghum bicolor]
Length = 649
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 44 NRVIQENNKPRNMTIFKTEVKRDIRRASRLSLE--EKSKNADKPTVIENQADNINIEV-- 99
N++ N+K R + K E+++ ++ A + E E K D +EN A N+ +
Sbjct: 505 NKITITNDKGR---LSKEEIEKMVQEAEKYKAEDEEHKKKVDAKNSLENYAYNMRNTIRD 561
Query: 100 -EVATNLNPNHQASEIDIAIENLPDLKSNHQASEID 134
++A+ L P +ID AIE + N+Q +E+D
Sbjct: 562 DKIASKL-PEADKKKIDDAIEGAINWLDNNQLAEVD 596
>gi|324506618|gb|ADY42823.1| Moesin/ezrin/radixin 1 [Ascaris suum]
Length = 566
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 69/153 (45%), Gaps = 10/153 (6%)
Query: 30 KKRNTIGNTIKKSINRVIQENNKPRNMTIFKTEVKRDIRRASRLSLEEKSKNADKPTVIE 89
++RN + + I++ +V + + T +KR++ A+RL E++++ A TV E
Sbjct: 406 EERNRLVSEIREREMQVAEMREQVDAKTAETNRLKREVEEAARLRREQEAQQAHALTVKE 465
Query: 90 NQAD-----NINIEVEVATNLNPNHQASEIDIAIENLPDLKSNHQASEIDIAIENLPDLK 144
D N ++ E+ + N E+D ++ H+ + +E + D +
Sbjct: 466 VDLDEELNENAHVHTELTARGDENVPQRELDRMTATDQNISLKHKLEALTADLEAVKDAQ 525
Query: 145 SNHQASEIDIA-IENLPDHQVDRNHTLSNLRGA 176
Q +E D+ +EN + D+ TL +RG
Sbjct: 526 ---QVTEYDLLHMENKRAGR-DKYKTLRQIRGG 554
>gi|313205590|ref|YP_004044767.1| integral membrane sensor signal transduction histidine kinase
[Riemerella anatipestifer DSM 15868]
gi|312444906|gb|ADQ81261.1| integral membrane sensor signal transduction histidine kinase
[Riemerella anatipestifer DSM 15868]
Length = 390
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 18/137 (13%)
Query: 56 MTIFKTEVKRDIRRASRLSLEEKSKNADKPTVIENQADNINIEVE---VATNLN-----P 107
+ I+ + RD+R+ ++ +K A + ENQ D +E+ + TN N
Sbjct: 31 LIIYSVVIVRDLRQKETANMAVFAK-AMRFLQDENQGDVRMLELVQEIITTNDNIPIIVT 89
Query: 108 NHQASEIDIAIENLPD-LKSNHQASEIDIAIENLPDLKSNHQASEIDIAIENLPDHQVDR 166
NHQ I I+N+PD +K N +A ++ L ++K + E+ I+ N+ D
Sbjct: 90 NHQGEPIKEFIKNIPDKIKDNSKALKV-----RLEEMKEGYPPFELQISEGNIQYLYFDN 144
Query: 167 NHTLSNLRGACYQPSLV 183
+ +++LR Y P+L+
Sbjct: 145 SDLMNSLR---YYPALL 158
>gi|15613534|ref|NP_241837.1| hypothetical protein BH0971 [Bacillus halodurans C-125]
gi|10173586|dbj|BAB04690.1| BH0971 [Bacillus halodurans C-125]
Length = 1013
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 13/117 (11%)
Query: 58 IFKTEVKRDIRRASRLSLEEKSKN-ADKPTVIENQADNINIEVEVATNLNPNHQASEIDI 116
+F TE + + SR + EE K D V+ +D+I E ++ +L + + D+
Sbjct: 647 MFLTEDIKQFQEFSREAREEMDKLLKDTNAVLSKLSDDIKEEQQLIVSLVNDTR----DL 702
Query: 117 AIENLPDLKSNHQASEIDIA-IENLPD--LKSNHQASEIDI-----AIENLPDHQVD 165
A +L +KSNH+ EI+ IE L ++ +HQ S +++ ++ +L +HQ D
Sbjct: 703 AGNSLDQMKSNHKPIEIEAGPIEGLDGHLVQVSHQTSLMEVQLLGDSVSSLSEHQDD 759
>gi|216263582|ref|ZP_03435577.1| borrelia P83/100 protein [Borrelia afzelii ACA-1]
gi|215980426|gb|EEC21247.1| borrelia P83/100 protein [Borrelia afzelii ACA-1]
Length = 663
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 26 DSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFKTEVKRDIR-RASRLSLEEKSKNADK 84
D++ +R+T+ ++++IN +E N P+ + +V + ++ + S L+E+ K A
Sbjct: 314 DNLDIQRDTVREKLQENINETNKEKNLPKPGDVSSPKVDKQLQIKESLEDLQEQLKEASD 373
Query: 85 PTVIENQADNINIEVEVATN-----LNPNHQASEIDIAIENLPDLKSNHQASEIDIAIEN 139
ENQ I ++E+ N N +H+A ++ + + K + E D +++
Sbjct: 374 ----ENQKREIEKQIEIKKNDEELLKNKDHKALDLKQELNSKASSKEKIEGEEEDKELDS 429
Query: 140 LPDLKSNHQASEID 153
L+ +A ++D
Sbjct: 430 KKKLEPVSEADKVD 443
>gi|115343127|gb|ABI94560.1| p83/100 [Borrelia afzelii]
Length = 663
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 26 DSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFKTEVKRDIR-RASRLSLEEKSKNADK 84
D++ +R+T+ +++ IN +E N P+ + +V + ++ + S L+E+ K A
Sbjct: 314 DNLDIQRDTVREKLQEIINETNKEKNLPKPGDVSSPKVDKQLQIKESLEDLQEQLKEASD 373
Query: 85 PTVIENQADNINIEVEVATN-----LNPNHQASEIDIAIENLPDLKSNHQASEIDIAIEN 139
ENQ I ++E+ N N +H+A ++ + + K + E D +++
Sbjct: 374 ----ENQKREIEKQIEIKKNDEELLKNKDHKALDLKQELNSKASSKEKIEGEEEDKELDS 429
Query: 140 LPDLKSNHQASEID 153
+L+ +A ++D
Sbjct: 430 KKNLEPVSEADKVD 443
>gi|206971880|ref|ZP_03232829.1| foldase protein PrsA [Bacillus cereus AH1134]
gi|206733265|gb|EDZ50438.1| foldase protein PrsA [Bacillus cereus AH1134]
gi|326940633|gb|AEA16529.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 280
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 1 MKSKNILIVSTLVICVLSISSCDLGDSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFK 60
MK K ++I S L+ LS+S+C D+I ++ G+ + N+ ++EN +N++ +
Sbjct: 1 MKRKKLVIGSILMGMTLSLSACGSSDNIVTTKS--GSISESDFNKKLKENYGKQNLS--E 56
Query: 61 TEVKRDIRRASRLSLEEKSKNADKPTVIENQADNINIEVEVATNLNPNHQASEIDIAIEN 120
V++ + +++ EE +K + + + DN N +E N + ++ +
Sbjct: 57 MVVEKVLNDKYKVTDEEVTKQLKE--LKDKMGDNFNTYMESNGVKNEDQLKEKLKLTFAF 114
Query: 121 LPDLKSNHQASEIDIAIENLPDLKSNH 147
+K+ +E DI P L+ +H
Sbjct: 115 EKAIKAT--VTEKDIKDHYKPKLQVSH 139
>gi|223995597|ref|XP_002287472.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976588|gb|EED94915.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 185
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 1 MKSKNILIVSTLVICVLSISSCDLGDSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFK 60
M+S+++L+V T L D+I+ +G+TI+ S+ R + + N + +
Sbjct: 2 MESESMLLVKT--------EYSKLQDAISD----LGDTIQSSLERQKEVTQRAHNTDLQR 49
Query: 61 TEVKRDIRRASRLSLEEKSKNADKPTVIENQAD 93
+V+R+ + + LEE N ++ ++EN+ D
Sbjct: 50 LQVERESLKLEKSRLEESIANNERANLLENERD 82
>gi|121495540|emb|CAL80729.1| erythrocyte membrane protein 1 [Plasmodium falciparum]
Length = 3331
Score = 36.3 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 85 PTVIENQADNINIEVEVATNLNPNHQASEIDIAIENLPDLKSNHQASEIDIAIENLPDLK 144
P ++ NQ N+N+ V N+NPNHQ ++ + N D +N +I+++++N +K
Sbjct: 3265 PNLMGNQNPNLNL---VENNMNPNHQ-NQNQVGDTNFVDTPANPTNVQIEMSVKNHKLVK 3320
Query: 145 SNHQASEI 152
+ +++
Sbjct: 3321 EKYPIADV 3328
>gi|241949235|ref|XP_002417340.1| intra-Golgi transport complex subunit 3, putative; oligomeric Golgi
complex component 3, putative [Candida dubliniensis
CD36]
gi|223640678|emb|CAX44984.1| intra-Golgi transport complex subunit 3, putative [Candida
dubliniensis CD36]
Length = 843
Score = 36.3 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 58/116 (50%), Gaps = 18/116 (15%)
Query: 37 NTIKKSINRVIQENNKPRNMTIFKTEVKRDIRRASRLSLEEKSKN--ADKPTVIEN---- 90
N + +++ +++EN N+T T K + R+ LS E ++KN ++K V+E+
Sbjct: 21 NNSENALDYLLKENGGENNLTHTSTTYK--MSRSKSLSQEGENKNIESEKARVVESITYP 78
Query: 91 ---------QADNINIEVEVATNLNPNHQASEIDIAIENLPDLKSNHQASEIDIAI 137
+ DNIN + T L P + D+ ++N+ + KS Q ++++I +
Sbjct: 79 FTNDEFQKIEYDNIN-SYDYDTILKPRDISHITDLQLDNILNFKSMVQRNKVEIGL 133
>gi|225012873|ref|ZP_03703306.1| response regulator receiver protein [Flavobacteria bacterium
MS024-2A]
gi|225002995|gb|EEG40972.1| response regulator receiver protein [Flavobacteria bacterium
MS024-2A]
Length = 515
Score = 36.3 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 62 EVKRDIRRASRLSLEEKSKNADKPTVIENQADNINIEVEVATNLNPNHQASEIDIAIENL 121
E+++ + + EE KN + ++E Q + +N + ++ H+ +++ + + +
Sbjct: 284 EIQKKFPKWWKNDTEEGGKNLYEKELLEAQCERLNFKRPISY-----HKITQLQHSQQLI 338
Query: 122 PDLKSNHQASEIDIAIENLPDLKSNHQASEIDIAIENLPDHQVDRNHTLSNLRGACYQPS 181
+L+ NH + + N D+ S H +E+++ E PD++ R+ TLS R + +
Sbjct: 339 KNLQ-NHTHEGLTAVVYNFVDMIS-HAKTEMEVIKELAPDNKAYRSITLSWYRNSPLKEL 396
Query: 182 LVSNSSL 188
L +SL
Sbjct: 397 LKKAASL 403
>gi|255553518|ref|XP_002517800.1| conserved hypothetical protein [Ricinus communis]
gi|223543072|gb|EEF44607.1| conserved hypothetical protein [Ricinus communis]
Length = 190
Score = 36.3 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 75 LEEKSKNADKPTVIENQADNINIEVEVATNLNPNHQASEIDIAIENLPDLKSNHQASEID 134
L + N + + E+Q +N N+E++ N P + +I EN D SN Q D
Sbjct: 58 LHPQCINLQRCNIQEHQLENPNLEIQYQKNSQPQEE----EILEENAQD--SNAQGK--D 109
Query: 135 IAIENLPDLKSNHQASEIDIAIENLPDHQVDRNHTLSNLRGACYQPSLVSNSSL 188
+EN P+L+S HQ S ++ D + N SN +G +P+ +S +
Sbjct: 110 DQLEN-PNLESQHQES-----LQPEEDKTREANAQDSNAQGKDGEPNTSPSSGI 157
>gi|166031790|ref|ZP_02234619.1| hypothetical protein DORFOR_01491 [Dorea formicigenerans ATCC
27755]
gi|166028243|gb|EDR47000.1| hypothetical protein DORFOR_01491 [Dorea formicigenerans ATCC
27755]
Length = 820
Score = 36.3 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 68 RRASRLSLEEKSKNADKPT-VIENQADNINIEVEVATNLNPNHQASEIDIAIENLPDL-- 124
R+A R + E+ + A K T E ++D+ V +AT L+ Q+ E+ I++ P++
Sbjct: 184 RKAKRAKMREQEQKAAKNTNPNEKRSDHRVTGVSLATRLSDKFQSPEMK-EIKSNPEMIP 242
Query: 125 KSNHQASEIDIAIENLPDLKSNHQASEIDIAIENLPDHQVDRNHT 169
+ + + D I PD+ E D+ E Q D+N T
Sbjct: 243 EEDKTKKQPDFVINRAPDIPIEDIPEESDVTEEAFDFTQADKNPT 287
>gi|240102184|ref|YP_002958492.1| DNA polymerase II large subunit [Thermococcus gammatolerans EJ3]
gi|239909737|gb|ACS32628.1| DNA polymerase II large subunit DP2, intein containing (dp2/polC)
[Thermococcus gammatolerans EJ3]
Length = 1459
Score = 36.3 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 34/60 (56%)
Query: 88 IENQADNINIEVEVATNLNPNHQASEIDIAIENLPDLKSNHQASEIDIAIENLPDLKSNH 147
IE + I++ T L + +A E+ +A+ N+P + + +++++ N+P +++NH
Sbjct: 184 IERMVEEIDLYHRAVTRLQYHPEADEVRLAMRNIPIEITGEETDKVEVSHRNVPGVETNH 243
>gi|254173420|ref|ZP_04880093.1| DNA polymerase II, large subunit DP2 [Thermococcus sp. AM4]
gi|214032829|gb|EEB73658.1| DNA polymerase II, large subunit DP2 [Thermococcus sp. AM4]
Length = 1292
Score = 36.3 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 34/60 (56%)
Query: 88 IENQADNINIEVEVATNLNPNHQASEIDIAIENLPDLKSNHQASEIDIAIENLPDLKSNH 147
IE + I++ T L + +A E+ +A+ N+P + + +++++ N+P +++NH
Sbjct: 184 IERMVEEIDLYHRAVTRLQYHPEADEVRLAMRNIPIEITGEETDKVEVSHRNVPGVETNH 243
>gi|260817916|ref|XP_002603831.1| hypothetical protein BRAFLDRAFT_101334 [Branchiostoma floridae]
gi|229289154|gb|EEN59842.1| hypothetical protein BRAFLDRAFT_101334 [Branchiostoma floridae]
Length = 573
Score = 35.9 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 43/92 (46%)
Query: 82 ADKPTVIENQADNINIEVEVATNLNPNHQASEIDIAIENLPDLKSNHQASEIDIAIENLP 141
A P +E +I E + ++ A+ IA E PD+++ A+ IA E P
Sbjct: 103 ATDPVEVEGSYTVPHIAEETSPDMEVEGTATVPHIAEETSPDMEAGCTATVPHIAEETSP 162
Query: 142 DLKSNHQASEIDIAIENLPDHQVDRNHTLSNL 173
D++ A+ IA E PD +V+ T+ ++
Sbjct: 163 DMEVEGTATVPHIAEETSPDMEVEGTATVPHI 194
>gi|291333898|gb|ADD93578.1| potassium transporter peripheral membrane component [uncultured
marine bacterium MedDCM-OCT-S04-C385]
Length = 452
Score = 35.9 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 51 NKPRNMTIFKTEVKRDIRRASRLSLEEKSKNADKPTVIENQADNINIEVEVA 102
N N+TI TE R + +S + L+ NA P V+E QAD NI+V VA
Sbjct: 21 NDGHNITIVDTEADRLQKASSHIDLKTVEGNASYPKVLE-QADINNIDVAVA 71
>gi|261886548|ref|ZP_06010587.1| hypothetical protein CfetvA_16890 [Campylobacter fetus subsp.
venerealis str. Azul-94]
Length = 365
Score = 35.9 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 18/181 (9%)
Query: 27 SIAKKRNTIGNTIKKSINRVIQENNKPR--NMTIFKTEVKRDIRRASRLSLEEKSKNADK 84
S + + I N IK N + E+ K R + K ++ I+ + + +K+ +
Sbjct: 28 SAKEAKELIDNAIKLLQNAPLDEHTKERLTQLEAAKEQLSLKIQELETSAQQLVAKDGEL 87
Query: 85 PTVIEN-QADNINIEV------EVATNLNPNHQASEIDIAIENLPDLKSNHQASEIDIAI 137
I+N +A++IN E E+ T L P D+ I N+ ++ Q + + I
Sbjct: 88 SAKIDNLEANSINQESINVKIGELKTELEPKINTVRADL-ITNIT--TNSEQINLLSTKI 144
Query: 138 ENLPDLKSNHQASEIDIA-----IENLPDHQVDRNHTLSNLRGACYQPSLVSNSSLKLWD 192
+NL DL ++ S ++A ++N P H ++G C S V+ ++ KLWD
Sbjct: 145 DNL-DLTADFTISPEELAQLEDYLKNPPILNSIPEHESFYVQGYCPSNSYVNWTNFKLWD 203
Query: 193 V 193
+
Sbjct: 204 L 204
>gi|57641838|ref|YP_184316.1| DNA polymerase II large subunit [Thermococcus kodakarensis KOD1]
gi|73919248|sp|Q5JET0|DP2L_PYRKO RecName: Full=DNA polymerase II large subunit; Short=Pol II;
Contains: RecName: Full=Pko polC intein; AltName:
Full=Pko pol II intein
gi|57160162|dbj|BAD86092.1| DNA polymerase II, large subunit [Thermococcus kodakarensis KOD1]
Length = 1798
Score = 35.5 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 34/60 (56%)
Query: 88 IENQADNINIEVEVATNLNPNHQASEIDIAIENLPDLKSNHQASEIDIAIENLPDLKSNH 147
IE + +++ T L + +A E+ +A+ N+P + + +++++ N+P +++NH
Sbjct: 184 IERMVEEVDLYHRAVTRLQYHPEADEVRLAMRNIPIEITGEETDKVEVSHRNVPGVETNH 243
>gi|329725492|gb|EGG61972.1| stage III sporulation protein E [Staphylococcus epidermidis VCU144]
Length = 1169
Score = 35.5 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 71 SRLSLEEKSKNADKPTVIENQADNINIEVEVATNLNPNHQASEIDIAIENLPDLKSN-HQ 129
S L LE +S +E Q+++ NI+ + A N P EID+ D S+ ++
Sbjct: 351 SSLDLENESNQDSSSNSLEKQSNSSNIDNKEAQNNTPLFNYEEIDL------DTTSDVYK 404
Query: 130 ASEIDIAIENLPDL-KSNHQASEIDIAIENLPDHQVDRN 167
+E + +N DL SNH S D +E+ H++D N
Sbjct: 405 VNEEETESKNDEDLVSSNHYHSNDDAEVEDAEYHELDDN 443
>gi|329737508|gb|EGG73761.1| stage III sporulation protein E [Staphylococcus epidermidis VCU045]
Length = 1169
Score = 35.5 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 71 SRLSLEEKSKNADKPTVIENQADNINIEVEVATNLNPNHQASEIDIAIENLPDLKSN-HQ 129
S L LE +S +E Q+++ NI+ + A N P EID+ D S+ ++
Sbjct: 351 SSLDLENESNQDSSSNSLEKQSNSSNIDNKEAQNNTPLFNYEEIDL------DTTSDVYK 404
Query: 130 ASEIDIAIENLPDL-KSNHQASEIDIAIENLPDHQVDRN 167
+E + +N DL SNH S D +E+ H++D N
Sbjct: 405 VNEEETESKNDEDLVSSNHYHSNDDAEVEDAEYHELDDN 443
>gi|27468332|ref|NP_764969.1| DNA translocase stage III sporulation prot [Staphylococcus
epidermidis ATCC 12228]
gi|57867175|ref|YP_188873.1| FtsK/SpoIIIE family protein [Staphylococcus epidermidis RP62A]
gi|293366317|ref|ZP_06612997.1| FtsK/SpoIIIE family protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|27315878|gb|AAO05013.1|AE016748_247 DNA translocase stage III sporulation prot [Staphylococcus
epidermidis ATCC 12228]
gi|57637833|gb|AAW54621.1| FtsK/SpoIIIE family protein [Staphylococcus epidermidis RP62A]
gi|291319555|gb|EFE59921.1| FtsK/SpoIIIE family protein [Staphylococcus epidermidis
M23864:W2(grey)]
Length = 1169
Score = 35.5 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 71 SRLSLEEKSKNADKPTVIENQADNINIEVEVATNLNPNHQASEIDIAIENLPDLKSN-HQ 129
S L LE +S +E Q+++ NI+ + A N P EID+ D S+ ++
Sbjct: 351 SSLDLENESNQDSSSNSLEKQSNSSNIDNKEAQNNTPLFNYEEIDL------DTTSDVYK 404
Query: 130 ASEIDIAIENLPDL-KSNHQASEIDIAIENLPDHQVDRN 167
+E + +N DL SNH S D +E+ H++D N
Sbjct: 405 VNEEETESKNDEDLVSSNHYHSNDDAEVEDAEYHELDDN 443
>gi|307128590|ref|YP_003880620.1| molecular chaperone DnaK [Candidatus Sulcia muelleri CARI]
gi|306483052|gb|ADM89922.1| molecular chaperone DnaK [Candidatus Sulcia muelleri CARI]
Length = 631
Score = 35.5 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 76 EEKSKNADKPTVIE------NQADNINIEVEVATNLNPNHQASE----IDIAIENLPDLK 125
+E +NADK I+ N AD++ + E + N + E I++ ++NL D +
Sbjct: 511 KEAQENADKDKKIKEEIEKMNSADSVIFQTEKQLKEHGNKMSEETKKNIELNLKNLKDAR 570
Query: 126 SNHQASEIDIAIENLPD-LKSNHQ 148
++ + S+IDI I NL L S++Q
Sbjct: 571 NSKKISDIDIYINNLNKILSSSYQ 594
>gi|189310620|emb|CAQ57983.1| coenzyme A acylating aldehyde dehydrogenase [Clostridium
saccharobutylicum]
Length = 469
Score = 35.1 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 23 DLGDSIAKKRNTIGNT--IKKSINRVIQENNKPRNMTIFKTEVKRDIRRASRLSLEE--- 77
DL ++ K I N + + +N V+Q+NN+ TI K V +D ++L L+E
Sbjct: 291 DLIKNMLKNNAVIINKDQVSRLVNLVLQKNNETSEYTINKKWVGKD----AKLFLDEIDV 346
Query: 78 KSKNADKPTVIENQADNINIEVEVATNLNPNHQASEIDIAIE--NLPDLKSNHQASEIDI 135
+S + + + E AD+ + E+ + P + +ID AI+ + + H A
Sbjct: 347 ESSSDVRCIICEVDADHPFVMTELMMPILPIVRVKDIDEAIKYAKIAEQNRKHSAYIYSK 406
Query: 136 AIENLPDLKSNHQASEIDIAI 156
IENL N EID I
Sbjct: 407 NIENL-----NRFEKEIDTTI 422
>gi|84998272|ref|XP_953857.1| hypothetical protein [Theileria annulata]
gi|65304854|emb|CAI73179.1| hypothetical protein TA06390 [Theileria annulata]
Length = 403
Score = 35.1 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 70/158 (44%), Gaps = 16/158 (10%)
Query: 39 IKKSINRVIQENNKPRNMTIFKTEVKRDIRRASRLS--LEEKSKNADKPTVIENQADNIN 96
+K+ ++ + N+ P N K V D+R ++ ++ L + KN E ++ +
Sbjct: 140 LKRDYIKIKKSNDDPNNSLNDKVNVGEDLRYSADINIVLSSRKKNETTENPEETGTNDFS 199
Query: 97 IEVEVATNLNPNHQASEIDIAIENLPDLKSNHQASEIDIAIENLP--DLKSNHQASEIDI 154
+ VE A++ + + + + + N DL+ +H +S+ ++N DL + S+ D+
Sbjct: 200 LTVEPASDNSISEECCGKNSCVTNNSDLQISHFSSDSVRTLDNSENNDLSNKEPVSDEDV 259
Query: 155 AIENLPDHQVDRNHTLSNLRGACYQPSLVSNSSLKLWD 192
+ N PD D CY S N ++L D
Sbjct: 260 S--NNPDTAEDH----------CYNSSSTGNWGVELDD 285
>gi|194754868|ref|XP_001959716.1| GF13013 [Drosophila ananassae]
gi|190621014|gb|EDV36538.1| GF13013 [Drosophila ananassae]
Length = 1165
Score = 35.1 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 13/151 (8%)
Query: 26 DSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIFKTEVKRDIRRASRLSLEEKSKNADKP 85
D + T+ +T++ N Q+ N+ + E+ RD+ + + +E + +
Sbjct: 808 DKLKNSTGTLQDTVEALENNYKQQLNE-------RKELIRDLMKEMQDKKDEFIEYCHE- 859
Query: 86 TVIENQADNINIEVEVATNLNPNHQASEIDIAIENLPDLKSNHQASEIDIAIENLPDLKS 145
+EN + ++ + E L +++ + K Q+ EID +E + LK
Sbjct: 860 VELENDRNMVSTQTEYENKLTTERNETQMWRGKAGVLQKKYESQSKEIDNLLEEVEILKE 919
Query: 146 NHQASEIDIA-----IENLPDHQVDRNHTLS 171
HQ S+ +IA IE+L DR++ ++
Sbjct: 920 EHQKSQRNIAKQLRNIEDLQKDIADRDYAIN 950
>gi|251811124|ref|ZP_04825597.1| DNA translocase [Staphylococcus epidermidis BCM-HMP0060]
gi|282875840|ref|ZP_06284707.1| FtsK/SpoIIIE family protein [Staphylococcus epidermidis SK135]
gi|251805344|gb|EES58001.1| DNA translocase [Staphylococcus epidermidis BCM-HMP0060]
gi|281294865|gb|EFA87392.1| FtsK/SpoIIIE family protein [Staphylococcus epidermidis SK135]
gi|329737272|gb|EGG73526.1| stage III sporulation protein E [Staphylococcus epidermidis VCU028]
Length = 1169
Score = 35.1 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 71 SRLSLEEKSKNADKPTVIENQADNINIEVEVATNLNPNHQASEIDIAIENLPDLKSNHQA 130
S L LE +S +E Q+++ NI+ + A N P EI NL ++
Sbjct: 351 SSLDLENESNQDSSSNSLEKQSNSSNIDNKEAQNNTPLFNYEEI-----NLDTTSDVYKV 405
Query: 131 SEIDIAIENLPDL-KSNHQASEIDIAIENLPDHQVDRN 167
+E + +N DL SNH S D +E+ H++D N
Sbjct: 406 NEEETESKNDEDLVSSNHYHSNDDAEVEDAEYHELDDN 443
>gi|123390510|ref|XP_001299898.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121880841|gb|EAX86968.1| hypothetical protein TVAG_471120 [Trichomonas vaginalis G3]
Length = 431
Score = 35.1 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 47 IQENNKPRNMTIFKTEVKRDIRRASRLSLEEKSKNADKPTVIENQADNINIEVEVATNLN 106
++ N K N + +TE+ + +A + +++NA K T I DN N+ ++ T +
Sbjct: 74 LKHNEKGINYSTNETEIVQGRPKA----FQNENENATKDTTINETVDNYNLSRDILTRIT 129
Query: 107 PNHQASEIDIAIENLPDL--KSNHQ 129
++SE + + L ++ K+NH+
Sbjct: 130 ELKESSEFETVYKFLDEISSKANHE 154
>gi|325289913|ref|YP_004266094.1| DegS sensor signal transduction histidine kinase [Syntrophobotulus
glycolicus DSM 8271]
gi|324965314|gb|ADY56093.1| DegS sensor signal transduction histidine kinase [Syntrophobotulus
glycolicus DSM 8271]
Length = 380
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
Query: 72 RLSLEEKSKNADKPTVIENQADNINIEVEVATNLNPNHQASEIDIAIENLPDLKSNHQAS 131
++ + E KN D E Q + +E + Q E+ I +N S
Sbjct: 44 KVEISETIKNVDAQQKKEKQLRQVLMETSLNYKRYTEKQMMEVYIEAKN----------S 93
Query: 132 EIDIAIENLPDLKSNHQASEIDIAIENLPDHQVDRNHTLSN 172
+ID+ + +L+ H+ E++ +++NL DH V+R L N
Sbjct: 94 QIDLQLIQEKELQLRHRRDELERSLKNL-DHTVERADNLMN 133
>gi|212224793|ref|YP_002308029.1| DNA polymerase II large subunit [Thermococcus onnurineus NA1]
gi|212009750|gb|ACJ17132.1| DNA polymerase II, small subunit [Thermococcus onnurineus NA1]
Length = 1771
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 35/60 (58%)
Query: 88 IENQADNINIEVEVATNLNPNHQASEIDIAIENLPDLKSNHQASEIDIAIENLPDLKSNH 147
IE + I++ T L + +A E+ +A++N+P + + +++++ ++P +++NH
Sbjct: 183 IERMVEEIDLYHRAVTRLQYHPEADEVRLAMKNIPIEITGEETDKVEVSHRDVPGVETNH 242
>gi|256071510|ref|XP_002572083.1| hypothetical protein [Schistosoma mansoni]
gi|238657234|emb|CAZ28313.1| 4.1 G protein, putative [Schistosoma mansoni]
Length = 700
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Query: 26 DSIAKKRNTI--GNTI---KKSINRVIQENNKPRNMTIFKTEVKRDIRRASRLSLEEKSK 80
D+IA+K+++ G+ + KK IN I+E N+P+ I E +R + ++++
Sbjct: 469 DNIAEKKSSTIQGDLLTDKKKLINVTIEEKNEPKKSDIMDGEKQRTSTKTDQMNI-TNIM 527
Query: 81 NADKPTVIENQADNINIEVEVATNLNPNHQASEIDIAIENLPDLKSNHQASEIDIAIENL 140
N + N N ++ V N Q ++DI + N+ + +E ++
Sbjct: 528 NLIQSNTDHNNDVNDSLSSGVEANAEATEQPLQVDINLNNIDGGGNVSSLAEATKSLNLN 587
Query: 141 PDLKSNHQASEIDIAIENLPDHQVDRNHTLSN 172
+L S++ +SE+ + + +N +LSN
Sbjct: 588 KNLFSSNSSSEVILRTQP----STIQNQSLSN 615
>gi|331003935|ref|ZP_08327424.1| hypothetical protein HMPREF0491_02286 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411955|gb|EGG91355.1| hypothetical protein HMPREF0491_02286 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 486
Score = 34.3 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 38 TIKKSINRVIQENNKPRNMTI-FKTEVKRDIRRASR-----LSLEEKSKNADKPTVIENQ 91
+I+ + ++ N P M F ++ +I R ++ LSL + K+A T++ Q
Sbjct: 273 SIRVLADSLMSMENVPNEMYAEFMQDISDEIDREAKIIDDLLSLVKLDKSAT--TLVTEQ 330
Query: 92 ADNINIEVEVATNLNPNHQASEIDIAIENLPDLKSNHQASEIDIAIENLPD--LKSNHQA 149
D + ++ L P Q +I++ E + ++ ++ +++ +AI NL + +K N
Sbjct: 331 VDINQLIKQILKRLRPIAQKRDIEMTFETIREVNADVDETKLSLAINNLIENAIKYNKDG 390
Query: 150 SEIDIAIENLPDHQ 163
+ ++I+ DH+
Sbjct: 391 GYVKVSID--ADHK 402
>gi|307176226|gb|EFN65862.1| Chromodomain Y-like protein 2 [Camponotus floridanus]
Length = 1528
Score = 34.3 bits (77), Expect = 8.1, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 45 RVIQENNKPRNMTIFKTEVKRDIRRASRLSLEEKSKNADKPTVIENQ-ADNINIEVEVAT 103
+++Q P ++ + V +++ A+ + S A +P E+ AD+I+I+ EVA
Sbjct: 10 QILQVEEIPTDINVQTIHVDENLKAATSTEGSQDSPKACRPVSTESTLADDIDIKAEVAA 69
Query: 104 NLNPNHQASEIDIAIENL-PDLKSNHQA-SEIDIAIENLPDLKSNHQASEIDIAIENLPD 161
AS I+++++++ D N+Q SE+ N + K E E++ D
Sbjct: 70 E--DYLDASHIEVSVKDIDSDAGYNNQVKSEL-----NKSETKVYTSEQEQIKIYEHIKD 122
Query: 162 HQVDRNHTLSNL 173
+D NH L +L
Sbjct: 123 ETIDSNHELQHL 134
>gi|288559480|ref|YP_003422966.1| adhesin-like protein with cysteine protease domain
[Methanobrevibacter ruminantium M1]
gi|288542190|gb|ADC46074.1| adhesin-like protein with cysteine protease domain
[Methanobrevibacter ruminantium M1]
Length = 1100
Score = 34.3 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Query: 1 MKSKNILIVSTLVICVL-SISSCDLGDSIAKKRNTIGNTIKKSINRVIQENNKPRNMTIF 59
MK K+ V L+IC+L SIS+ D+ + N + IN+ +Q N ++ T
Sbjct: 1 MKLKSKYFVFLLIICILFSISTVSANDNDMSINQNLQNDANQDINQDLQLNEAYQSDTNL 60
Query: 60 KTEVKRDIRRASRLSLEEKSKNADKPTVIENQADNINIEVEVATNLNPNHQASEIDIAIE 119
++ + + L E D I+N D NIE + + NH + I I
Sbjct: 61 NQNLQANNQENDLLKASEDKTYNDLYNDIKNCEDTFNIENDYKYTESDNH--TFISINKT 118
Query: 120 NLPDLKSNH 128
NL +NH
Sbjct: 119 NLVINGNNH 127
>gi|322513561|ref|ZP_08066661.1| glucosamine-fructose-6-phosphate aminotransferase [Actinobacillus
ureae ATCC 25976]
gi|322120632|gb|EFX92526.1| glucosamine-fructose-6-phosphate aminotransferase [Actinobacillus
ureae ATCC 25976]
Length = 610
Score = 34.3 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 114 IDIAIENLPDLKSNHQASEIDIAIENLPDLKSNHQASEIDIAIENLPDHQVDRNHTLSNL 173
+++AI L S Q I A++ LP A D AIE L + D++HTL
Sbjct: 416 LNVAIGRLKGTVSEEQEHHIVQALQRLP--AQIESALVFDKAIEKLSEDFADKHHTLFLG 473
Query: 174 RGACYQPSLVSNSSLKLWDVAF 195
RG Y ++ S+LKL ++++
Sbjct: 474 RGEYYPIAM--ESALKLKEISY 493
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.312 0.128 0.347
Lambda K H
0.267 0.0397 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,430,659,729
Number of Sequences: 14124377
Number of extensions: 47873334
Number of successful extensions: 136474
Number of sequences better than 10.0: 204
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 189
Number of HSP's that attempted gapping in prelim test: 136289
Number of HSP's gapped (non-prelim): 337
length of query: 195
length of database: 4,842,793,630
effective HSP length: 131
effective length of query: 64
effective length of database: 2,992,500,243
effective search space: 191520015552
effective search space used: 191520015552
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 77 (34.3 bits)