HHsearch alignment for GI: 254781011 and conserved domain: COG1040
>COG1040 ComFC Predicted amidophosphoribosyltransferases [General function prediction only].
Probab=98.58 E-value=2.3e-07 Score=68.95 Aligned_cols=106 Identities=25% Similarity=0.350 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC-------HHHHHHHHHH----HCCCCEEEEECCC--CCCHH-----HH
Q ss_conf 99999999999986642175666789982231-------2578899985----1587178763156--42011-----00
Q gi|254781011|r 56 RARSMIMDLTAKTVLRNIGFESIDIIAGGETA-------GIPFATLLAE----RLNLPMIYVRKKS--KKHGQ-----KS 117 (228)
Q Consensus 56 ~~~~~i~~~~~~~i~~~~~~~~~d~I~G~a~~-------Gip~a~~iA~----~l~~p~~~vRK~~--K~hG~-----~~ 117 (228)
T Consensus 92 ~l~~~la~~l~~~~~~--~~~~~~~iVpVPls~~r~~~RGFNQ~~~la~~l~~~~~~~~~l~r~k~~~~q~~l~~~~rr~ 169 (225)
T COG1040 92 DLAKLLARLLAKALDD--FLEKPDLIVPVPLSPSRLLERGFNQSELLARALARRLGKPIALRRVKDTSPQQGLKALERRR 169 (225)
T ss_pred HHHHHHHHHHHHHHHH--CCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCHHHEECCCCCCCCCCCHHHHHH
T ss_conf 7899999999998651--13466759973698778874687899999999877647642110000673100455589998
Q ss_pred HHHHCC------CCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEE
Q ss_conf 133103------7334144087887322369999999986598785688887
Q gi|254781011|r 118 QIEGHL------FKGARVLVIEDLVTLGNSMFEFVKVIRDSGGIIQDGIGLF 163 (228)
Q Consensus 118 ~iEG~~------~~g~~vliVDDviTtG~S~~~~i~~l~~~g~~V~~~~vii 163 (228)
T Consensus 170 nl~~aF~~~~~~~~~~~vlLvDDV~TTGaTl~~~~~~L~~~Ga~~v~~~~la 221 (225)
T COG1040 170 NLKGAFRLKKGIEEPKNVLLVDDVYTTGATLKEAAKLLREAGAKRVFVLTLA 221 (225)
T ss_pred HCCCCEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEE
T ss_conf 4605631478767677289994006667999999999997599169999998