HHsearch alignment for GI: 254781011 and conserved domain: KOG1448

Probab=98.13  E-value=1.9e-05  Score=56.48  Aligned_cols=152  Identities=20%  Similarity=0.267  Sum_probs=106.1

Q ss_pred             HHHHHHHHHHHHCCCEEEECCCCEEEECCCC---CCEEEECCCC--CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
Q ss_conf             9999999999865976820789867311872---6401426213--5798999999999999866421756667899822
Q gi|254781011|r   11 IIAELVAKMLFEIKAVNFSPENPYHLTSGIV---SPLYIDCRKL--ISFVRARSMIMDLTAKTVLRNIGFESIDIIAGGE   85 (228)
Q Consensus        11 ~~~~~~a~~L~~~~ai~~~~~g~F~L~SG~~---Sp~Y~d~r~~--~s~P~~~~~i~~~~~~~i~~~~~~~~~d~I~G~a   85 (228)
T Consensus       107 i~aklVanlls~aG~dh-------vIt~DlHa~Q~qgfF~ipVdnly~~p~~l~~--------ir~~~~~~~~~vivSPd  171 (316)
T KOG1448         107 ILAKLVANLLSSAGADH-------VITMDLHASQIQGFFDIPVDNLYAEPAVLNY--------IRENIPDSENAVIVSPD  171 (316)
T ss_pred             HHHHHHHHHHHCCCCCE-------EEEECCCCHHHCCEEECCCHHHCCCHHHHHH--------HHHHCCCCCCEEEECCC
T ss_conf             89999985020058965-------9982465342075240202110256388899--------98618874531898788


Q ss_pred             CCHHHHHHHHHHHCCCCEEEEECC-CCCCHHH--HHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE
Q ss_conf             312578899985158717876315-6420110--0133103733414408788732236999999998659878568888
Q gi|254781011|r   86 TAGIPFATLLAERLNLPMIYVRKK-SKKHGQK--SQIEGHLFKGARVLVIEDLVTLGNSMFEFVKVIRDSGGIIQDGIGL  162 (228)
Q Consensus        86 ~~Gip~a~~iA~~l~~p~~~vRK~-~K~hG~~--~~iEG~~~~g~~vliVDDviTtG~S~~~~i~~l~~~g~~V~~~~vi  162 (228)
T Consensus       172 aGgaKR~~s~ad~l~~~fali~ker~k~~~v~~~m~LVGDv-~gkvaIlVDDm~dt~GTl~~aa~~L~~~GA~kV--~a~  248 (316)
T KOG1448         172 AGGAKRVTSLADRLNLDFALIHKERRKANEVDIRMVLVGDV-KGKVAILVDDMADTCGTLIKAADKLLEHGAKKV--YAI  248 (316)
T ss_pred             CCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEECC-CCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEE--EEE
T ss_conf             64556667777752115553301420045542589998536-786899943641136419999999986587459--999


Q ss_pred             EECCCCHH-HHHHHHHCCC
Q ss_conf             74176324-8999997798
Q gi|254781011|r  163 FFYDIFPE-VPARFRENNI  180 (228)
Q Consensus       163 i~~~~~~~-~~~~l~~~gi  180 (228)
T Consensus       249 ~THgVfs~~a~er~~~s~~  267 (316)
T KOG1448         249 VTHGVFSGPAIERLNESAL  267 (316)
T ss_pred             ECCEECCCCHHHHHHHCCC
T ss_conf             7132226318877344043