HHsearch alignment for GI: 254781011 and conserved domain: PRK02270
>PRK02270 consensus.
Probab=98.89 E-value=7.9e-08 Score=71.92 Aligned_cols=150 Identities=18% Similarity=0.267 Sum_probs=96.1
Q ss_pred HHHHHHHHHHCCCEEEECCCCEEEECCCCCCEEEECCC--CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHH
Q ss_conf 99999999865976820789867311872640142621--3579899999999999986642175666789982231257
Q gi|254781011|r 13 AELVAKMLFEIKAVNFSPENPYHLTSGIVSPLYIDCRK--LISFVRARSMIMDLTAKTVLRNIGFESIDIIAGGETAGIP 90 (228)
Q Consensus 13 ~~~~a~~L~~~~ai~~~~~g~F~L~SG~~Sp~Y~d~r~--~~s~P~~~~~i~~~~~~~i~~~~~~~~~d~I~G~a~~Gip 90 (228)
T Consensus 111 aklvA~lL~~~G~d~vi---tvDlH~~qiq-gfF~iPvd~l~a~~--------~l~~~i~~~~--~~-~vvVsPD~G~~~ 175 (327)
T PRK02270 111 AKLVADLLEKAGATKII---SVDLHNPSIQ-GFFDIPVDDIKGQY--------ILAKELKKKN--EK-FTVVSPDHGGAV 175 (327)
T ss_pred HHHHHHHHHHCCCCEEE---EECCCHHHHH-CCCCCCCEEEECCH--------HHHHHHHHCC--CC-EEEEECCCCHHH
T ss_conf 99999988524786478---8435768885-04699730477427--------8799886406--87-189976974899
Q ss_pred HHHHHHHHCC--CCEEEEECCCCCCHHHHH--HHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECC
Q ss_conf 8899985158--717876315642011001--331037334144087887322369999999986598785688887417
Q gi|254781011|r 91 FATLLAERLN--LPMIYVRKKSKKHGQKSQ--IEGHLFKGARVLVIEDLVTLGNSMFEFVKVIRDSGGIIQDGIGLFFYD 166 (228)
Q Consensus 91 ~a~~iA~~l~--~p~~~vRK~~K~hG~~~~--iEG~~~~g~~vliVDDviTtG~S~~~~i~~l~~~g~~V~~~~vii~~~ 166 (228)
T Consensus 176 ra~~~a~~Lg~~~~~a~~~K~R~~~~~~e~~~~iGdV-~Gk~~IIVDDiIdTGgTl~~aa~~Lk~~GA~~V--~~~aTHg 252 (327)
T PRK02270 176 RARILAEIISDQIKIAIIDKRRTGANKSEVLGLIGDV-DGKNAVIIDDIIDTGGTIINAAEVLKEKGAKKI--VLAATHG 252 (327)
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCCCCE-EEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEE--EEEEECH
T ss_conf 9999999853897488850246787742352045631-201489976700054779999999998799879--9999774
Q ss_pred CCHHHHH-HHHHCCC
Q ss_conf 6324899-9997798
Q gi|254781011|r 167 IFPEVPA-RFRENNI 180 (228)
Q Consensus 167 ~~~~~~~-~l~~~gi 180 (228)
T Consensus 253 vfs~~a~~~~~~s~i 267 (327)
T PRK02270 253 LFSKGFEIFEENPNI 267 (327)
T ss_pred HCCCHHHHHHHCCCC
T ss_conf 438049999658998