HHsearch alignment for GI: 254781011 and conserved domain: PRK03675
>PRK03675 consensus.
Probab=98.92 E-value=2e-08 Score=75.89 Aligned_cols=110 Identities=17% Similarity=0.312 Sum_probs=83.8
Q ss_pred HHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCHH--HHHHHHCCCCCCCEEEHHHHHHHHHHH
Q ss_conf 999866421756667899822312578899985158717876315642011--001331037334144087887322369
Q gi|254781011|r 65 TAKTVLRNIGFESIDIIAGGETAGIPFATLLAERLNLPMIYVRKKSKKHGQ--KSQIEGHLFKGARVLVIEDLVTLGNSM 142 (228)
Q Consensus 65 ~~~~i~~~~~~~~~d~I~G~a~~Gip~a~~iA~~l~~p~~~vRK~~K~hG~--~~~iEG~~~~g~~vliVDDviTtG~S~ 142 (228)
T Consensus 142 ~~~~~~~~~~--~-~vVVsPD~G~~~ra~~~A~~lg~~~~~~~K~R~~~~~v~~~~~~~dV-~Gk~vIIVDDiIdTGgTl 217 (279)
T PRK03675 142 IAEYFRDKLG--E-GLVLAPDKGALERAKAVAEVLGLEYSHFEKERISPTEVEMTPVDVDV-KGKNVLIVDDIISTGGTM 217 (279)
T ss_pred HHHHHHHHCC--C-CEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCC-CCCEEEEECCCCCCHHHH
T ss_conf 8999985089--8-68997898889999999986178657887326789821652555554-796799974510252789
Q ss_pred HHHHHHHHHCCCEEEEEEEEEECCCCH-HHHHHHHHCCCE
Q ss_conf 999999986598785688887417632-489999977980
Q gi|254781011|r 143 FEFVKVIRDSGGIIQDGIGLFFYDIFP-EVPARFRENNIK 181 (228)
Q Consensus 143 ~~~i~~l~~~g~~V~~~~vii~~~~~~-~~~~~l~~~gi~ 181 (228)
T Consensus 218 ~~aa~~Lk~~GA~~V--~~~aTHglfs~~A~~~l~~~-i~ 254 (279)
T PRK03675 218 IRAAEILRKLGAKKI--FVVATHGVFAEGAIERVSKA-VD 254 (279)
T ss_pred HHHHHHHHHCCCCEE--EEEEECCCCCCHHHHHHHHH-CC
T ss_conf 999999997699869--99997810680699999974-88