HHsearch alignment for GI: 254781011 and conserved domain: PRK04554

Probab=99.06  E-value=3.1e-09  Score=81.06  Aligned_cols=154  Identities=18%  Similarity=0.305  Sum_probs=101.3

Q ss_pred             HHHHHHHHHHCCCEEEECCCCEEEECCCCCCEEEECC--CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHH
Q ss_conf             9999999986597682078986731187264014262--13579899999999999986642175666789982231257
Q gi|254781011|r   13 AELVAKMLFEIKAVNFSPENPYHLTSGIVSPLYIDCR--KLISFVRARSMIMDLTAKTVLRNIGFESIDIIAGGETAGIP   90 (228)
Q Consensus        13 ~~~~a~~L~~~~ai~~~~~g~F~L~SG~~Sp~Y~d~r--~~~s~P~~~~~i~~~~~~~i~~~~~~~~~d~I~G~a~~Gip   90 (228)
T Consensus       113 ak~vA~lL~~~G~d~v---itvDlH~~qiqg-fF~ipvd~l~a~--------~~l~~~i~~~-~~~~-~vvVsPD~G~~~  178 (327)
T PRK04554        113 AKLVANMLYSAGIDRV---LTVDLHADQIQG-FFDIPVDNIYAT--------PILLNDIKQQ-RIEN-LTVVSPDIGGVV  178 (327)
T ss_pred             HHHHHHHHHHCCCCCC---EEECCCHHHHHC-CCCCCCCCCCCH--------HHHHHHHHHC-CCCC-CEEECCCCCHHH
T ss_conf             9999855762598850---476268488734-368970211121--------9999999860-7787-289837953899


Q ss_pred             HHHHHHHHCCCCEEEEECCCCCCHHH--HHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCC
Q ss_conf             88999851587178763156420110--0133103733414408788732236999999998659878568888741763
Q gi|254781011|r   91 FATLLAERLNLPMIYVRKKSKKHGQK--SQIEGHLFKGARVLVIEDLVTLGNSMFEFVKVIRDSGGIIQDGIGLFFYDIF  168 (228)
Q Consensus        91 ~a~~iA~~l~~p~~~vRK~~K~hG~~--~~iEG~~~~g~~vliVDDviTtG~S~~~~i~~l~~~g~~V~~~~vii~~~~~  168 (228)
T Consensus       179 ra~~~A~~L~~~~a~~~K~R~~~~~~~~~~~vgdV-~Gk~~IIVDDiIdTGgTl~~aa~~Lk~~GA~~V--~~~aTHglf  255 (327)
T PRK04554        179 RARAVAKSLNADLAIIDKRRPKANVAEVMNIIGDI-QGRTCLIVDDMIDTANTLCKAAVALKERGAERV--LAYASHAVF  255 (327)
T ss_pred             HHHHHHHHCCCCEEEEEEECCCCCCEEEECCCCCC-CCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEE--EEEEECCCC
T ss_conf             99999975688779999644899822651255641-222367204321350679999999997699878--999879160


Q ss_pred             H-HHHHHHHHCCCEEE
Q ss_conf             2-48999997798099
Q gi|254781011|r  169 P-EVPARFRENNIKLH  183 (228)
Q Consensus       169 ~-~~~~~l~~~gi~~~  183 (228)
T Consensus       256 s~~A~~rl~~s~i~~i  271 (327)
T PRK04554        256 SGEAVSRIASSEIDQV  271 (327)
T ss_pred             CCHHHHHHHHCCCCEE
T ss_conf             6339999971899789