HHsearch alignment for GI: 254781011 and conserved domain: PRK12560

Probab=99.88  E-value=2.1e-22  Score=166.92  Aligned_cols=147  Identities=20%  Similarity=0.206  Sum_probs=112.2

Q ss_pred             EECCCCCCEEEE---CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf             311872640142---62135798999999999999866421756667899822312578899985158717876315642
Q gi|254781011|r   36 LTSGIVSPLYID---CRKLISFVRARSMIMDLTAKTVLRNIGFESIDIIAGGETAGIPFATLLAERLNLPMIYVRKKSKK  112 (228)
Q Consensus        36 L~SG~~Sp~Y~d---~r~~~s~P~~~~~i~~~~~~~i~~~~~~~~~d~I~G~a~~Gip~a~~iA~~l~~p~~~vRK~~K~  112 (228)
T Consensus        10 v~~g~-~~~~ihpitDgvP~l~p~~l~~i~~~ii~----~~D-~~iDkIv~iEa~GipiatalSl~t~iPlviiRKr~yg   83 (184)
T PRK12560         10 VNSGK-ALTTVNEFTDQLPALRPAVLLEVAHKVIQ----IID-MDIDKIVTEEDKGAPLATAVSLLSGKPLAMARWYPYS   83 (184)
T ss_pred             EECCC-CCEEECCCCCCCCCCCHHHHHHHHHHHHH----HCC-CCCCEEEEHHHCCCHHHHHHHHHHCCCEEEEECCCCC
T ss_conf             65065-42475676688757798999999999998----616-6876897413356388999999759988999814678


Q ss_pred             --------------CHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHH-HHH
Q ss_conf             --------------01100133103733414408788732236999999998659878568888741763248999-997
Q gi|254781011|r  113 --------------HGQKSQIEGHLFKGARVLVIEDLVTLGNSMFEFVKVIRDSGGIIQDGIGLFFYDIFPEVPAR-FRE  177 (228)
Q Consensus       113 --------------hG~~~~iEG~~~~g~~vliVDDviTtG~S~~~~i~~l~~~g~~V~~~~vii~~~~~~~~~~~-l~~  177 (228)
T Consensus        84 l~~~~e~~~~~~Tgys~g~iy~n~I~~GdrVlIVDDvlaTGGTl~a~~~ll~~~Ga~V~~i~~vIEk~-~~~Gr~~l~~~  162 (184)
T PRK12560         84 LSELNNNVVNISSEYFEGVVYLNGISAGDRVAIIDDTLSTGGTVIALIKAIQNSGGIVKDLICAVEKI-QNNGKKNIFTQ  162 (184)
T ss_pred             CCCCCEEEEEEECCEEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEEEECC-CCCCHHHHHHC
T ss_conf             88785288875155577689704679999899995120567589999999998699899999999816-65657777552


Q ss_pred             CCCEEEEECCHH
Q ss_conf             798099963299
Q gi|254781011|r  178 NNIKLHYLATWN  189 (228)
Q Consensus       178 ~gi~~~sl~t~~  189 (228)
T Consensus       163 ~G~~v~sLv~I~  174 (184)
T PRK12560        163 TGINVKTLMKIS  174 (184)
T ss_pred             CCCCEEEEEEEE
T ss_conf             598458999999