HHsearch results for GI: 254781011 and protein with PDBid: 1a3c_A
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding protein, pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=98.44 E-value=7.3e-07 Score=64.21 Aligned_cols=116 Identities=18% Similarity=0.191 Sum_probs=77.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCC----CC--EEEEEC-CCCCC-HHHH----
Q ss_conf 135798999999999999866421756667899822312578899985158----71--787631-56420-1100----
Q gi|254781011|r 50 KLISFVRARSMIMDLTAKTVLRNIGFESIDIIAGGETAGIPFATLLAERLN----LP--MIYVRK-KSKKH-GQKS---- 117 (228)
Q Consensus 50 ~~~s~P~~~~~i~~~~~~~i~~~~~~~~~d~I~G~a~~Gip~a~~iA~~l~----~p--~~~vRK-~~K~h-G~~~---- 117 (228)
.+++.-+..+.| +.++..|.++....+.-+++|+-.||++|++.+...+. .| ..++.- .-+++ +...
T Consensus 6 il~~~~~I~~~i-~~lA~qI~e~~~~~~~~vligil~Gg~~fa~~L~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 84 (181)
T 1a3c_A 6 VILDEQAIRRAL-TRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLSKKTSNDE 84 (181)
T ss_dssp EEECHHHHHHHH-HHHHHHHHHHCC----CEEEEESHHHHHHHHHHHHHHHHHHSSCCEEEEEEEECCC--------CCC
T ss_pred EECCHHHHHHHH-HHHHHHHHHHCCCCCCEEEEEECCCEEEHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCC
T ss_conf 963899999999-9999999986689998899987353997288999864221288741101344677425654556763
Q ss_pred -HHHH-C---CCCCCCEEEHHHHHHHHHHHHHHHHHHHHCC-CEEEEEEEEEECC
Q ss_conf -1331-0---3733414408788732236999999998659-8785688887417
Q gi|254781011|r 118 -QIEG-H---LFKGARVLVIEDLVTLGNSMFEFVKVIRDSG-GIIQDGIGLFFYD 166 (228)
Q Consensus 118 -~iEG-~---~~~g~~vliVDDviTtG~S~~~~i~~l~~~g-~~V~~~~vii~~~ 166 (228)
.+.. . -.+|++|+||||++-||.|+..+++.+.+.| +..+-+++++++.
T Consensus 85 ~~~~~~d~~~~l~gk~VliVDDIlDTG~TL~~~~~~l~~~~~~~~v~~avL~dk~ 139 (181)
T 1a3c_A 85 PLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRG 139 (181)
T ss_dssp CEEEEEECSSCCTTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred CEEECCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCC
T ss_conf 4786145762125978999940011218999999999743898689999998287