HHsearch results for GI: 254781011 and protein with PDBid: 3dah_A
>3dah_A Ribose-phosphate pyrophosphokinase; seattle structural genomics center for infectious disease, ssgcid, cytoplasm, magnesium; HET: AMP; 2.30A {Burkholderia pseudomallei 1710B}
Probab=99.03 E-value=3e-09 Score=79.74 Aligned_cols=150 Identities=15% Similarity=0.260 Sum_probs=100.5
Q ss_pred HHHHHHHHHHCCCEE---EECCCCEEEECCCCCCEEEECC--CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
Q ss_conf 999999998659768---2078986731187264014262--13579899999999999986642175666789982231
Q gi|254781011|r 13 AELVAKMLFEIKAVN---FSPENPYHLTSGIVSPLYIDCR--KLISFVRARSMIMDLTAKTVLRNIGFESIDIIAGGETA 87 (228)
Q Consensus 13 ~~~~a~~L~~~~ai~---~~~~g~F~L~SG~~Sp~Y~d~r--~~~s~P~~~~~i~~~~~~~i~~~~~~~~~d~I~G~a~~ 87 (228)
++.+|++|-..|+=+ +.+| |.... -||+.. .+-..|. +. ..+.+. ...+ .+|++|-.|
T Consensus 114 a~~va~ll~~~g~d~vitvDlH------~~~i~-~~f~~pv~~l~~~~~----~~----~~~~~~-~~~~-~vvvsPD~G 176 (319)
T 3dah_A 114 AKVVANMLEIAGVERIITMDLH------ADQIQ-GFFDIPVDNIYATPI----LL----GDLRKQ-NYPD-LLVVSPDVG 176 (319)
T ss_dssp HHHHHHHHHHHTCCEEEEESCS------CGGGG-GGCSSCEEEECCHHH----HH----HHHHTT-CCTT-EEEECCSST
T ss_pred HHHHHHHHHHCCCCEEEEECCC------HHHHH-HCCCCCCHHHHCCHH----HH----HHHHHH-CCCC-CEEECCCCC
T ss_conf 9999844400588559995778------48784-166997033312578----88----999974-7987-389856885
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCHHH--HHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEC
Q ss_conf 25788999851587178763156420110--0133103733414408788732236999999998659878568888741
Q gi|254781011|r 88 GIPFATLLAERLNLPMIYVRKKSKKHGQK--SQIEGHLFKGARVLVIEDLVTLGNSMFEFVKVIRDSGGIIQDGIGLFFY 165 (228)
Q Consensus 88 Gip~a~~iA~~l~~p~~~vRK~~K~hG~~--~~iEG~~~~g~~vliVDDviTtG~S~~~~i~~l~~~g~~V~~~~vii~~ 165 (228)
+...+..+|..++.|+.+..|+..+.+.- ..+.|.+ +|+.|+||||++.||+|+.++++.|++.||.-+. ++..+
T Consensus 177 a~kra~~~A~~l~~~~~~~~K~R~~~~~v~~~~~~gdv-~gr~vIIVDDii~TGgTi~~aa~~Lk~~GA~~V~--~~~TH 253 (319)
T 3dah_A 177 GVVRARALAKQLNCDLAIIDKRRPKANVAEVMNIIGEV-EGRTCVIMDDMVDTAGTLCKAAQVLKERGAKQVF--AYATH 253 (319)
T ss_dssp THHHHHHHHHHTTCEEEC---------------------CCSEEEEEEEEESSCHHHHHHHHHHHHTTCSCEE--EEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCC-CCCEEEEECCHHCCCHHHHHHHHHHHHCCCCEEE--EEEEC
T ss_conf 69999998986499889999991899936773144343-7987897373440620199999999977998648--99746
Q ss_pred CCCH-HHHHHHHHCCCEE
Q ss_conf 7632-4899999779809
Q gi|254781011|r 166 DIFP-EVPARFRENNIKL 182 (228)
Q Consensus 166 ~~~~-~~~~~l~~~gi~~ 182 (228)
+.|. ++.+++.+.+++-
T Consensus 254 glfs~~a~e~l~~s~i~~ 271 (319)
T 3dah_A 254 PVLSGGAADRIAASALDE 271 (319)
T ss_dssp ECCCTTHHHHHHTSSCSE
T ss_pred CCCCHHHHHHHHHCCCCE
T ss_conf 644807999986189998