HHsearch alignment for GI: 254781012 and conserved domain: COG0084

>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair].
Probab=96.68  E-value=0.051  Score=31.91  Aligned_cols=234  Identities=15%  Similarity=0.134  Sum_probs=102.5

Q ss_pred             CCCEEEEECCC----HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCC--
Q ss_conf             66423750881----788987498741887399983895148989899999999999838688469950134527899--
Q gi|254781012|r    8 VPDDWHLHLRD----GEILKTVLRDTAKNFRRALVMPNIDPPIITVDDACAYRQRILNALPPEYDFSPLMTIYLTETT--   81 (349)
Q Consensus         8 ~~~D~HvH~Re----g~~~~~t~aa~aGG~TtV~~MPNT~Ppi~t~e~~~~~~~r~~~~~~~~~~~~~~~~~~lt~~~--   81 (349)
T Consensus         2 ~liDtH~HL~~~~~~~d~~~vi~~a~~~gv~~~~~------~g~~~~~~~~~~~--la~~y~----~v~~~~G~HP~~~~   69 (256)
T COG0084           2 MLIDTHCHLDFEEFDEDRDEVIARAREAGVKKMVV------VGTDLEDFKRALE--LAEKYP----NVYAAVGVHPLDAD   69 (256)
T ss_pred             CCEEEEECCCCHHHCCCHHHHHHHHHHCCCCEEEE------EECCHHHHHHHHH--HHHHCC----CEEEEEEECCCCCC
T ss_conf             62785057880332689999999999859937999------6158888899999--998689----86899866887333


Q ss_pred             C--HH---HHHHHHHC-CCEEEHHHCCCCCEECCCCCCCHHHHH----HHHHHHHHHCCCCEECCCCCCCCCCCCHHHHH
Q ss_conf             9--88---99874406-872102210455100256541006889----99999998739822202575555543001467
Q gi|254781012|r   82 D--PD---DVEKGFTS-QLVQAIKLYFAGSTTNSHHGIRNIDRV----MPVLERMETIGMPLCIHGEILNQDIDIFDREL  151 (349)
Q Consensus        82 ~--~~---~~~~~~~~-~~~~~~k~~~~~~~~~~~~~v~~~~~~----~~~le~~~~~~~~i~~H~E~~~~~~~~~~~E~  151 (349)
T Consensus        70 ~~~~~~~~~l~~~~~~~~~vvaIGEiGLD--y~~~~~~-~~~~Q~~~F~~ql~lA~~~~lPviIH~R~---------A~~  137 (256)
T COG0084          70 EHSEEDLEELEQLAEHHPKVVAIGEIGLD--YYWDKEP-DKERQEEVFEAQLELAKELNLPVIIHTRD---------AHE  137 (256)
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEEECCCC--CCCCCCC-CHHHHHHHHHHHHHHHHHCCCCEEEECCC---------CHH
T ss_conf             36788999999987218985899833468--5656664-47899999999999999739977998674---------279


Q ss_pred             HHHHHHHHHHHHHH--CCCEEEEECCCHHHHH-HHHHHCCCCCEEEECCCCCCCHHHHHCCCCCCCEEECCCCCCHHHHH
Q ss_conf             65457899999620--6953997057858999-99870573320230231003978861378883113213469999999
Q gi|254781012|r  152 MFIDKILDPLRNKL--PNLKIILEHITTSNGI-DYVNNATNIAGSITVHHLIINRNAIFHDGLNPHYYCLPIPKREKHRL  228 (349)
Q Consensus       152 ~~~~~~l~~~~a~~--~~~~iHi~HiST~~sv-~lir~ak~vtaEVTPHHL~lt~~d~~~~~~~~~~k~nPPlR~~~dr~  228 (349)
T Consensus       138 d----~~~iL~~~~~~~~gi~H-cFsGs~e~a~~~~d~G---------~yisis---------G~itf----k~a~~~~e  190 (256)
T COG0084         138 D----TLEILKEEGAPVGGVLH-CFSGSAEEARKLLDLG---------FYISIS---------GIVTF----KNAEKLRE  190 (256)
T ss_pred             H----HHHHHHHCCCCCCEEEE-CCCCCHHHHHHHHHCC---------EEEEEC---------CEEEC----CCCHHHHH
T ss_conf             9----99999864878888998-3789799999999769---------289978---------66641----78588999


Q ss_pred             HHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHH--CCCCHHHHHHHHHHCCHHHCCC
Q ss_conf             999999769941897138886531332154577544543679999999972--0699999999982431788188
Q gi|254781012|r  229 SLRKAALSGNPRFFLGTDSAPHWDSSKESSCGCAGIYTARNALNCLAQIFE--EENKLENLESFVSINGATWYGI  301 (349)
Q Consensus       229 aL~~ai~~G~i~d~I~TDHAPH~~eeK~~~~~~~g~~~~~~~~~~~~~~~~--~~~~L~~l~~~~s~npa~~~gl  301 (349)
T Consensus       191 v~~~iPld-r--LL~ETDs-Pyl~P-----~p~rGkrNeP~~v~~v~~~iAelk~~~~eeva~~t~~N~~~lf~~  256 (256)
T COG0084         191 VARELPLD-R--LLLETDA-PYLAP-----VPYRGKRNEPAYVRHVAEKLAELKGISAEEVAEITTENAKRLFGL  256 (256)
T ss_pred             HHHHCCHH-H--EEECCCC-CCCCC-----CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
T ss_conf             99959976-7--6864579-88888-----777999999647999999999875979999999999999998568