HHsearch alignment for GI: 254781012 and conserved domain: KOG3968

Probab=97.67  E-value=0.0046  Score=38.35  Aligned_cols=114  Identities=15%  Similarity=0.050  Sum_probs=63.4

Q ss_pred             EEEECCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf             99705785899999870573320230231003978861378883113213469999999999999769941897138886
Q gi|254781012|r  170 IILEHITTSNGIDYVNNATNIAGSITVHHLIINRNAIFHDGLNPHYYCLPIPKREKHRLSLRKAALSGNPRFFLGTDSAP  249 (349)
Q Consensus       170 iHi~HiST~~sv~lir~ak~vtaEVTPHHL~lt~~d~~~~~~~~~~k~nPPlR~~~dr~aL~~ai~~G~i~d~I~TDHAP  249 (349)
T Consensus       277 aH~~hl~d~ei~~l~k~g~sv--shCP~----Sn-~~L~s--G~-----~~vr---------~lL~~~v~Vg-LGtDv~~  332 (439)
T KOG3968         277 AHLEHLSDEEIELLAKRGCSV--SHCPT----SN-SILGS--GI-----PRVR---------ELLDIGVIVG-LGTDVSG  332 (439)
T ss_pred             HHHEECCCHHHHHHHHCCCCE--EECCC----CH-HHHCC--CC-----CCHH---------HHHHCCCEEE-ECCCCCC
T ss_conf             641104711678998628744--77776----40-34306--88-----4589---------9975181673-1687666


Q ss_pred             CCHHHHHCCCCCCCCCCHHHHHHHHHHHHH--CCCCHHHHHHHHHHCCHHHCCCCCC--------CCEEEEEECCCC
Q ss_conf             531332154577544543679999999972--0699999999982431788188988--------852899947971
Q gi|254781012|r  250 HWDSSKESSCGCAGIYTARNALNCLAQIFE--EENKLENLESFVSINGATWYGIPVN--------TRKISLKRREQP  316 (349)
Q Consensus       250 H~~eeK~~~~~~~g~~~~~~~~~~~~~~~~--~~~~L~~l~~~~s~npa~~~gl~~~--------~~~i~l~d~~~~  316 (349)
T Consensus       333 ~s~l~a---------~r~A~~~s~hL~~~~~~~~Ls~~e~L~lATi~GA~aLg~d~~~Gs~eVGK~fDai~id~s~~  400 (439)
T KOG3968         333 CSILNA---------LRQAMPMSMHLACVLDVMKLSMEEALYLATIGGAKALGRDDTHGSLEVGKYFDAIIIDLSAP  400 (439)
T ss_pred             CCCHHH---------HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHCCCCCCCCCEECCCCCCEEEEECCCC
T ss_conf             410899---------99998999888742673248999999998505165406777656542145355699847987