HHsearch alignment for GI: 254781012 and conserved domain: PRK04250

>PRK04250 dihydroorotase; Provisional.
Probab=100.00  E-value=0  Score=519.65  Aligned_cols=317  Identities=19%  Similarity=0.174  Sum_probs=250.7

Q ss_pred             CEEEECCCCEEEEECCC------HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEE
Q ss_conf             65586466423750881------788987498741887399983895148989899999999999838688469950134
Q gi|254781012|r    2 KKISLRVPDDWHLHLRD------GEILKTVLRDTAKNFRRALVMPNIDPPIITVDDACAYRQRILNALPPEYDFSPLMTI   75 (349)
Q Consensus         2 ~~l~lp~~~D~HvH~Re------g~~~~~t~aa~aGG~TtV~~MPNT~Ppi~t~e~~~~~~~r~~~~~~~~~~~~~~~~~   75 (349)
T Consensus        47 G~~vlPG~ID~hvH~~~pg~~~ke~~~sgs~AAa~GGvTtv~~mPnt~p~~~~~~~~~~~~~~~----~~~~~~d~~~~~  122 (408)
T PRK04250         47 GKIILPGLIDVHVHLRDFEEKYKETIETGTKAALHGGITTVFDMPNTKPPIMDEKTLKLREGIF----EKKSYADYALGF  122 (408)
T ss_pred             CCEEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHH----CCCCEEEEEEEE
T ss_conf             9989578896450678888530346887899998389359976788999868799999999984----769757883079


Q ss_pred             EECCCCCHHHHHHHHHCCCEEEHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCH--HHHHHH
Q ss_conf             527899988998744068721022104551002565410068899999999873982220257555554300--146765
Q gi|254781012|r   76 YLTETTDPDDVEKGFTSQLVQAIKLYFAGSTTNSHHGIRNIDRVMPVLERMETIGMPLCIHGEILNQDIDIF--DRELMF  153 (349)
Q Consensus        76 ~lt~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~v~~~~~~~~~le~~~~~~~~i~~H~E~~~~~~~~~--~~E~~~  153 (349)
T Consensus       123 ~~~~~~-~~~~~~~~~-----~~k~~~~~~~----~~~~~-~~~~---~~~~~~~~~~~vHaEd~~l~~~~~~rP~~aE~  188 (408)
T PRK04250        123 LLAGNC-GEAKPVKAD-----FYKIFMGAST----GGIYS-ENFE---EDYACAPDIVSVHAEDPEIIRRYPERPPEAEV  188 (408)
T ss_pred             EEECCC-CHHHHHHHH-----HHHHEECCCC----CCHHH-HHHH---HHHHHCCCCEEECCCCHHHHHCCCCCCHHHHH
T ss_conf             960773-036788887-----7632303466----50657-8799---99986599789957997888448999999999


Q ss_pred             HHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCC--CCCEEEECCCCCCCHHHHHCCCCCCCEEECCCCCCHHHHHHHH
Q ss_conf             45789999962069539970578589999987057--3320230231003978861378883113213469999999999
Q gi|254781012|r  154 IDKILDPLRNKLPNLKIILEHITTSNGIDYVNNAT--NIAGSITVHHLIINRNAIFHDGLNPHYYCLPIPKREKHRLSLR  231 (349)
Q Consensus       154 ~~~~l~~~~a~~~~~~iHi~HiST~~sv~lir~ak--~vtaEVTPHHL~lt~~d~~~~~~~~~~k~nPPlR~~~dr~aL~  231 (349)
T Consensus       189 ~ai~r~~~la~~tg~~lhi~HvSs~~~l~~I~~a~~~~vt~Et~ph~L~l~~~~~~---~~~~~k~~PPLRs~~dr~aL~  265 (408)
T PRK04250        189 RAIKKALEAAKKLKKPLHICHVSTKDGLKEILKSNLPWVSFEVTPHHLFLTRKDYE---RNPLLKVYPPLRSEEDRRALW  265 (408)
T ss_pred             HHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEHHHHHCCHHHHC---CCCCEEECCCCCCHHHHHHHH
T ss_conf             99999999999849969999458899999999841798399981226447837757---568749789999788899999


Q ss_pred             HHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHH-HHCCCCHHHHHHHHHHCCHHHCCCCC------C
Q ss_conf             9997699418971388865313321545775445436799999999-72069999999998243178818898------8
Q gi|254781012|r  232 KAALSGNPRFFLGTDSAPHWDSSKESSCGCAGIYTARNALNCLAQI-FEEENKLENLESFVSINGATWYGIPV------N  304 (349)
Q Consensus       232 ~ai~~G~i~d~I~TDHAPH~~eeK~~~~~~~g~~~~~~~~~~~~~~-~~~~~~L~~l~~~~s~npa~~~gl~~------~  304 (349)
T Consensus       266 ~~l~--~I-d~i~SDH~P~~~e~K~~--~~~G~~glEt~lpl~~~~v~~g~isl~~lv~~~s~nPAki~gl~~~~i~~G~  340 (408)
T PRK04250        266 ENFS--RI-PIIASDHAPHTLEDKEA--GAAGLPGLETEVALLLDAANKGMITLKDIVEKMHINPARIFGIKNKGFEEGK  340 (408)
T ss_pred             HHHC--CC-CEEEECCCCCCHHHHCC--CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHCCCCCCCCCCC
T ss_conf             8626--88-88983688889788344--7789870888999999999817988999999974275996497888847998


Q ss_pred             CCEEEEEECCCCEEECHHHCCCCCCEEECCCCEEECCEEEE
Q ss_conf             85289994797178471122677771465797698338887
Q gi|254781012|r  305 TRKISLKRREQPIIFDEKITTSTGSITIFNPIFPLYWEVML  345 (349)
Q Consensus       305 ~~~i~l~d~~~~~~v~~~~~~sk~~~tpF~~g~~l~w~V~~  345 (349)
T Consensus       341 dADlvi~Dp~~~~~v~~~~~~s~~~~spf~-G~~l~G~v~~  380 (408)
T PRK04250        341 DADFTIVDMKKEWTIKAEEFYTKAGWTPYE-GWKVKGKVIM  380 (408)
T ss_pred             CCCEEEECCCCCEEECHHHCCCCCCCCCCC-CCEEEEEEEE
T ss_conf             675899949997898857752648857845-9788779999