HHsearch alignment for GI: 254781012 and conserved domain: PRK04250
>PRK04250 dihydroorotase; Provisional.
Probab=100.00 E-value=0 Score=519.65 Aligned_cols=317 Identities=19% Similarity=0.174 Sum_probs=250.7
Q ss_pred CEEEECCCCEEEEECCC------HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEE
Q ss_conf 65586466423750881------788987498741887399983895148989899999999999838688469950134
Q gi|254781012|r 2 KKISLRVPDDWHLHLRD------GEILKTVLRDTAKNFRRALVMPNIDPPIITVDDACAYRQRILNALPPEYDFSPLMTI 75 (349)
Q Consensus 2 ~~l~lp~~~D~HvH~Re------g~~~~~t~aa~aGG~TtV~~MPNT~Ppi~t~e~~~~~~~r~~~~~~~~~~~~~~~~~ 75 (349)
T Consensus 47 G~~vlPG~ID~hvH~~~pg~~~ke~~~sgs~AAa~GGvTtv~~mPnt~p~~~~~~~~~~~~~~~----~~~~~~d~~~~~ 122 (408)
T PRK04250 47 GKIILPGLIDVHVHLRDFEEKYKETIETGTKAALHGGITTVFDMPNTKPPIMDEKTLKLREGIF----EKKSYADYALGF 122 (408)
T ss_pred CCEEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHH----CCCCEEEEEEEE
T ss_conf 9989578896450678888530346887899998389359976788999868799999999984----769757883079
Q ss_pred EECCCCCHHHHHHHHHCCCEEEHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCH--HHHHHH
Q ss_conf 527899988998744068721022104551002565410068899999999873982220257555554300--146765
Q gi|254781012|r 76 YLTETTDPDDVEKGFTSQLVQAIKLYFAGSTTNSHHGIRNIDRVMPVLERMETIGMPLCIHGEILNQDIDIF--DRELMF 153 (349)
Q Consensus 76 ~lt~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~v~~~~~~~~~le~~~~~~~~i~~H~E~~~~~~~~~--~~E~~~ 153 (349)
T Consensus 123 ~~~~~~-~~~~~~~~~-----~~k~~~~~~~----~~~~~-~~~~---~~~~~~~~~~~vHaEd~~l~~~~~~rP~~aE~ 188 (408)
T PRK04250 123 LLAGNC-GEAKPVKAD-----FYKIFMGAST----GGIYS-ENFE---EDYACAPDIVSVHAEDPEIIRRYPERPPEAEV 188 (408)
T ss_pred EEECCC-CHHHHHHHH-----HHHHEECCCC----CCHHH-HHHH---HHHHHCCCCEEECCCCHHHHHCCCCCCHHHHH
T ss_conf 960773-036788887-----7632303466----50657-8799---99986599789957997888448999999999
Q ss_pred HHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCC--CCCEEEECCCCCCCHHHHHCCCCCCCEEECCCCCCHHHHHHHH
Q ss_conf 45789999962069539970578589999987057--3320230231003978861378883113213469999999999
Q gi|254781012|r 154 IDKILDPLRNKLPNLKIILEHITTSNGIDYVNNAT--NIAGSITVHHLIINRNAIFHDGLNPHYYCLPIPKREKHRLSLR 231 (349)
Q Consensus 154 ~~~~l~~~~a~~~~~~iHi~HiST~~sv~lir~ak--~vtaEVTPHHL~lt~~d~~~~~~~~~~k~nPPlR~~~dr~aL~ 231 (349)
T Consensus 189 ~ai~r~~~la~~tg~~lhi~HvSs~~~l~~I~~a~~~~vt~Et~ph~L~l~~~~~~---~~~~~k~~PPLRs~~dr~aL~ 265 (408)
T PRK04250 189 RAIKKALEAAKKLKKPLHICHVSTKDGLKEILKSNLPWVSFEVTPHHLFLTRKDYE---RNPLLKVYPPLRSEEDRRALW 265 (408)
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEHHHHHCCHHHHC---CCCCEEECCCCCCHHHHHHHH
T ss_conf 99999999999849969999458899999999841798399981226447837757---568749789999788899999
Q ss_pred HHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHH-HHCCCCHHHHHHHHHHCCHHHCCCCC------C
Q ss_conf 9997699418971388865313321545775445436799999999-72069999999998243178818898------8
Q gi|254781012|r 232 KAALSGNPRFFLGTDSAPHWDSSKESSCGCAGIYTARNALNCLAQI-FEEENKLENLESFVSINGATWYGIPV------N 304 (349)
Q Consensus 232 ~ai~~G~i~d~I~TDHAPH~~eeK~~~~~~~g~~~~~~~~~~~~~~-~~~~~~L~~l~~~~s~npa~~~gl~~------~ 304 (349)
T Consensus 266 ~~l~--~I-d~i~SDH~P~~~e~K~~--~~~G~~glEt~lpl~~~~v~~g~isl~~lv~~~s~nPAki~gl~~~~i~~G~ 340 (408)
T PRK04250 266 ENFS--RI-PIIASDHAPHTLEDKEA--GAAGLPGLETEVALLLDAANKGMITLKDIVEKMHINPARIFGIKNKGFEEGK 340 (408)
T ss_pred HHHC--CC-CEEEECCCCCCHHHHCC--CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHCCCCCCCCCCC
T ss_conf 8626--88-88983688889788344--7789870888999999999817988999999974275996497888847998
Q ss_pred CCEEEEEECCCCEEECHHHCCCCCCEEECCCCEEECCEEEE
Q ss_conf 85289994797178471122677771465797698338887
Q gi|254781012|r 305 TRKISLKRREQPIIFDEKITTSTGSITIFNPIFPLYWEVML 345 (349)
Q Consensus 305 ~~~i~l~d~~~~~~v~~~~~~sk~~~tpF~~g~~l~w~V~~ 345 (349)
T Consensus 341 dADlvi~Dp~~~~~v~~~~~~s~~~~spf~-G~~l~G~v~~ 380 (408)
T PRK04250 341 DADFTIVDMKKEWTIKAEEFYTKAGWTPYE-GWKVKGKVIM 380 (408)
T ss_pred CCCEEEECCCCCEEECHHHCCCCCCCCCCC-CCEEEEEEEE
T ss_conf 675899949997898857752648857845-9788779999