HHsearch alignment for GI: 254781012 and conserved domain: PRK07572
>PRK07572 cytosine deaminase; Validated.
Probab=99.04 E-value=9.3e-07 Score=61.21 Aligned_cols=279 Identities=13% Similarity=0.134 Sum_probs=139.9
Q ss_pred CEEEECCCCEEEEECCC------------H-------------------HHHH----HHHHHHCCCCEEEEECCCC-CCC
Q ss_conf 65586466423750881------------7-------------------8898----7498741887399983895-148
Q gi|254781012|r 2 KKISLRVPDDWHLHLRD------------G-------------------EILK----TVLRDTAKNFRRALVMPNI-DPP 45 (349)
Q Consensus 2 ~~l~lp~~~D~HvH~Re------------g-------------------~~~~----~t~aa~aGG~TtV~~MPNT-~Pp 45 (349)
T Consensus 45 G~LvlPgfVd~H~HLDkt~~~g~p~~~~~gtl~~~i~~~~~~~~~~t~edv~~Ra~~~l~~a~a~Gtt~iRtHvdv~d~~ 124 (425)
T PRK07572 45 GRLVSPPFVDPHFHMDATLSYGLPRVNASGTLLEGIALWGELKPLLTQEALVERALRYCDWAVARGLLAIRSHVDVCDPR 124 (425)
T ss_pred CCEECCCCCCCEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf 98768787760058545623479887888788999999997532078778999999999999975965255136257973
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCC-CHHHHHHHHHCCC-EEEHHHCCCCCEECCCCCCCHHHHHHHHH
Q ss_conf 989899999999999838688469950134527899-9889987440687-21022104551002565410068899999
Q gi|254781012|r 46 IITVDDACAYRQRILNALPPEYDFSPLMTIYLTETT-DPDDVEKGFTSQL-VQAIKLYFAGSTTNSHHGIRNIDRVMPVL 123 (349)
Q Consensus 46 i~t~e~~~~~~~r~~~~~~~~~~~~~~~~~~lt~~~-~~~~~~~~~~~~~-~~~~k~~~~~~~~~~~~~v~~~~~~~~~l 123 (349)
T Consensus 125 l~~~ea~~~~r~~~~~~~~lq--iVAfpq~g~~~~~~~~~ll~~al~~Gad~v------GG~p~~~~t~~d~~~~l~~~f 196 (425)
T PRK07572 125 LLAVEALLEVRERVAPYLDLQ--LVAFPQDGVLRSPGALANLKRALDMGVDVV------GGIPHFERTMADGAASVRLLC 196 (425)
T ss_pred HHHHHHHHHHHHHHHHHCCCC--EEECCCCCCCCCCCHHHHHHHHHHCCCCEE------ECCCCCCCCCHHHHHHHHHHH
T ss_conf 138999999999724322120--465266433358458999999996289788------454687666143899999999
Q ss_pred HHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHH---------HHHHHHHCCCCCEEE
Q ss_conf 99987398222025755555430014676545789999962069539970578589---------999987057332023
Q gi|254781012|r 124 ERMETIGMPLCIHGEILNQDIDIFDRELMFIDKILDPLRNKLPNLKIILEHITTSN---------GIDYVNNATNIAGSI 194 (349)
Q Consensus 124 e~~~~~~~~i~~H~E~~~~~~~~~~~E~~~~~~~l~~~~a~~~~~~iHi~HiST~~---------sv~lir~ak~vtaEV 194 (349)
T Consensus 197 ~lA~~~g~~iDiHldE~~d---~~---~~~l~~la~~t~~~G~~grVt~sH~~~L~~~~~~~~~~~i~~lAea-gi~vv~ 269 (425)
T PRK07572 197 EIAAERGLRVDMHCDESDD---PL---SRHIETLAAETQRLGLQGRVAGSHLTSMHSMDNYYVSKLIPLMAEA-GVAAIA 269 (425)
T ss_pred HHHHHCCCCEEEEECCCCC---HH---HHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHC-CCCEEE
T ss_conf 9999749975873468777---15---7899999999998289885561363111349999999999999982-995552
Q ss_pred ECC-CCCCCHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCC-HHHHHH
Q ss_conf 023-100397886137888311321346999999999999976994189713888653133215457754454-367999
Q gi|254781012|r 195 TVH-HLIINRNAIFHDGLNPHYYCLPIPKREKHRLSLRKAALSGNPRFFLGTDSAPHWDSSKESSCGCAGIYT-ARNALN 272 (349)
Q Consensus 195 TPH-HL~lt~~d~~~~~~~~~~k~nPPlR~~~dr~aL~~ai~~G~i~d~I~TDHAPH~~eeK~~~~~~~g~~~-~~~~~~ 272 (349)
T Consensus 270 ~P~~Nl~L~g------R~~----~~p~~RGvtpv~eL~~a---GV-~ValGtDnv-------~D~~~p~G~~DmLe~a~- 327 (425)
T PRK07572 270 NPLINITLQG------RHD----TYPKRRGMTRVPELMAA---GI-NVAFGHDCV-------MDPWYSLGSGDMLEVAH- 327 (425)
T ss_pred CCCCCCEECC------CCC----CCCCCCCCCCHHHHHHC---CC-EEEEECCCC-------CCCCCCCCCCCHHHHHH-
T ss_conf 5655523036------678----88988888899999976---98-599906888-------78775678876899999-
Q ss_pred HHHHHHHC--CCCHHHHHHHHHHCCHHHCCCC------CCCCEEEEEECCCCE
Q ss_conf 99999720--6999999999824317881889------888528999479717
Q gi|254781012|r 273 CLAQIFEE--ENKLENLESFVSINGATWYGIP------VNTRKISLKRREQPI 317 (349)
Q Consensus 273 ~~~~~~~~--~~~L~~l~~~~s~npa~~~gl~------~~~~~i~l~d~~~~~ 317 (349)
T Consensus 328 l~~~~~~l~~~~~~~~~~~~vT~~~A~~lGl~~~gl~~G~~ADlVl~da~~~~ 380 (425)
T PRK07572 328 MGLHVAQMTGQDAMRACFDAVTVNPARIMGLEGYGLAPGCRADLVLLQARDPV 380 (425)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHH
T ss_conf 99998746888999999999733788851998658489996568999698989