HHsearch alignment for GI: 254781012 and conserved domain: PRK09059
>PRK09059 dihydroorotase; Validated.
Probab=100.00 E-value=0 Score=543.00 Aligned_cols=330 Identities=17% Similarity=0.138 Sum_probs=273.0
Q ss_pred CEEEECCCCEEEEECCC------HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEE
Q ss_conf 65586466423750881------788987498741887399983895148989899999999999838688469950134
Q gi|254781012|r 2 KKISLRVPDDWHLHLRD------GEILKTVLRDTAKNFRRALVMPNIDPPIITVDDACAYRQRILNALPPEYDFSPLMTI 75 (349)
Q Consensus 2 ~~l~lp~~~D~HvH~Re------g~~~~~t~aa~aGG~TtV~~MPNT~Ppi~t~e~~~~~~~r~~~~~~~~~~~~~~~~~ 75 (349)
T Consensus 55 G~~vlPG~ID~HvH~~~pg~~~~e~~~t~s~AA~~GGvTtv~~mPnt~P~~~~~~~~~~~~~~a~~~----~~~~~~~~~ 130 (429)
T PRK09059 55 GKAVAPGLVDARVFVGEPGAEHRETIASASRAAAAGGVTSIIMMPDTDPVIDNVALVEFVKRTARDT----AIVNIHPAA 130 (429)
T ss_pred CCEEECCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH----CCCCCCEEE
T ss_conf 9989489898862569988544344888999998289079997579988888499999999860321----553401378
Q ss_pred EECCCCCHHHHHHHHHCCCEEEHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCC----------
Q ss_conf 5278999889987440687210221045510025654100688999999998739822202575555543----------
Q gi|254781012|r 76 YLTETTDPDDVEKGFTSQLVQAIKLYFAGSTTNSHHGIRNIDRVMPVLERMETIGMPLCIHGEILNQDID---------- 145 (349)
Q Consensus 76 ~lt~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~v~~~~~~~~~le~~~~~~~~i~~H~E~~~~~~~---------- 145 (349)
T Consensus 131 ~~~~~~~~~~l~e~~~l~~~g~~~------f~~~~~~~~~~~~l~~~~~~~~~~~~~~~~h~Ed~~l~~~~~~~eg~~~~ 204 (429)
T PRK09059 131 AITKGLAGEEMTEFGLLRAAGAVA------FTDGRRSVANAQVMRRALTYARDFDAVIVHETEDPDLGGNGVMNEGLFAS 204 (429)
T ss_pred EEECCCCCCHHHHHHHHHHCCEEE------ECCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHCHHHCCCCCCC
T ss_conf 852488722345567898669067------50486356899999999999986698479888898888442432542000
Q ss_pred -----CHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCC----CCCEEEECCCCCCCHHHHHCCCCCCCEE
Q ss_conf -----0014676545789999962069539970578589999987057----3320230231003978861378883113
Q gi|254781012|r 146 -----IFDRELMFIDKILDPLRNKLPNLKIILEHITTSNGIDYVNNAT----NIAGSITVHHLIINRNAIFHDGLNPHYY 216 (349)
Q Consensus 146 -----~~~~E~~~~~~~l~~~~a~~~~~~iHi~HiST~~sv~lir~ak----~vtaEVTPHHL~lt~~d~~~~~~~~~~k 216 (349)
T Consensus 205 ~~~~~~~P~~~E~~av~r~i~la~~~~~~vhi~HiSs~~~~~~I~~ak~~G~~vt~ev~phhL~l~~~~~~~--~~~~~k 282 (429)
T PRK09059 205 WLGLSGIPREAEVIPLERDLRLAALTRGRYHAAQISCAESADALRRAKDRGLKVTAGVSINHLSLNENDIGE--YRTFFK 282 (429)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEHHHHCCCHHHHCC--CCCCCC
T ss_conf 138999998999999999999999859858986317267799999999739968999605752288557442--367223
Q ss_pred ECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCC--CCCCCCCHHHHHHHHHH-HHHCCCCHHHHHHHHHH
Q ss_conf 2134699999999999997699418971388865313321545--77544543679999999-97206999999999824
Q gi|254781012|r 217 CLPIPKREKHRLSLRKAALSGNPRFFLGTDSAPHWDSSKESSC--GCAGIYTARNALNCLAQ-IFEEENKLENLESFVSI 293 (349)
Q Consensus 217 ~nPPlR~~~dr~aL~~ai~~G~i~d~I~TDHAPH~~eeK~~~~--~~~g~~~~~~~~~~~~~-~~~~~~~L~~l~~~~s~ 293 (349)
T Consensus 283 ~~PPLR~~~d~~~L~~~l~~G~I-d~i~SDHaP~~~~~K~~~f~~a~~G~~gve~~lp~~~~~v~~~~isl~~~v~~~s~ 361 (429)
T PRK09059 283 LSPPLRTEEDRLAMVEAVASGTI-DVIVSDHDPQDVDTKRLPFAEAAAGAIGLETLLAAALRLYHNGEVPLLRLIEALST 361 (429)
T ss_pred CCCCCCCHHHHHHHHHHHHCCCC-EEEEECCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf 48999998999999999977997-09996999999777659863236785607659999999998599999999999969
Q ss_pred CCHHHCCCC------CCCCEEEEEECCCCEEECHHHCCCCCCEEECCCCEEECCEEEE
Q ss_conf 317881889------8885289994797178471122677771465797698338887
Q gi|254781012|r 294 NGATWYGIP------VNTRKISLKRREQPIIFDEKITTSTGSITIFNPIFPLYWEVML 345 (349)
Q Consensus 294 npa~~~gl~------~~~~~i~l~d~~~~~~v~~~~~~sk~~~tpF~~g~~l~w~V~~ 345 (349)
T Consensus 362 nPAki~Gl~kG~i~~G~dADlvi~D~~~~~~v~~~~~~s~~~~sp~~-G~~l~G~v~~ 418 (429)
T PRK09059 362 RPAELFGLPAGTLKPGAPADIIVIDLDEPWVVDPEDLKSRSKNTPFE-EARFQGRVVR 418 (429)
T ss_pred HHHHHHCCCCCCCCCCCCCCEEEEECCCCEEECHHHCCCCCCCCCCC-CCEEEEEEEE
T ss_conf 99999699888617998168899959998898857770758977855-9788889999