HHsearch alignment for GI: 254781012 and conserved domain: PRK09061
>PRK09061 D-glutamate deacylase; Validated.
Probab=99.97 E-value=8.8e-30 Score=203.67 Aligned_cols=295 Identities=10% Similarity=-0.023 Sum_probs=172.0
Q ss_pred CEEEECCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECC-CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE-------
Q ss_conf 655864664237508817889874987418873999838-951489898999999999998386884699501-------
Q gi|254781012|r 2 KKISLRVPDDWHLHLRDGEILKTVLRDTAKNFRRALVMP-NIDPPIITVDDACAYRQRILNALPPEYDFSPLM------- 73 (349)
Q Consensus 2 ~~l~lp~~~D~HvH~Reg~~~~~t~aa~aGG~TtV~~MP-NT~Ppi~t~e~~~~~~~r~~~~~~~~~~~~~~~------- 73 (349)
T Consensus 51 G~~V~PGfID~HtH~~~~---~~~~~~~~~GvTT~v~~~~g~~p~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~ 121 (496)
T PRK09061 51 GLVVAPGFIDLHAHGQSL---PAYRMQAFDGVTTTLELEVGVLPVARWYAEQ-EGR-----GRLLNYGASVGWTPARIAA 121 (496)
T ss_pred CCEECCCCEEEEECCCCC---CCCHHHHCCCEEEEEECCCCCCCHHHHHHHH-HCC-----CCEECHHHHCCCHHHHHHH
T ss_conf 999864400421068999---7667887599689997489985335678755-322-----4401202113630555554
Q ss_pred -------------------EEEECCCCCHHHHHHHHHCCC----EEEHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf -------------------345278999889987440687----210221045510025654100688999999998739
Q gi|254781012|r 74 -------------------TIYLTETTDPDDVEKGFTSQL----VQAIKLYFAGSTTNSHHGIRNIDRVMPVLERMETIG 130 (349)
Q Consensus 74 -------------------~~~lt~~~~~~~~~~~~~~~~----~~~~k~~~~~~~~~~~~~v~~~~~~~~~le~~~~~~ 130 (349)
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~m~~l~~~~l~~Ga~G~s----~~~~y~p~~~~~El~~l~~~~~~~~ 197 (496)
T PRK09061 122 MTGPQAEGTIAWFGKAFSDNRWIERVATAAELAEILNRIEQGLDEGGLGIG----IGAAYAPGAGHKELYELCRLAARRD 197 (496)
T ss_pred HCCCCCHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCEEE----ECCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 315531135666544310351110489989999999999999981782152----1244477788899999999987539
Q ss_pred CCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCH------HHHHHHHHHCC----CCCEEEECCCCC
Q ss_conf 82220257555554300146765457899999620695399705785------89999987057----332023023100
Q gi|254781012|r 131 MPLCIHGEILNQDIDIFDRELMFIDKILDPLRNKLPNLKIILEHITT------SNGIDYVNNAT----NIAGSITVHHLI 200 (349)
Q Consensus 131 ~~i~~H~E~~~~~~~~~~~E~~~~~~~l~~~~a~~~~~~iHi~HiST------~~sv~lir~ak----~vtaEVTPHHL~ 200 (349)
T Consensus 198 ~~~~~h~r~~~~~~----~~~~~eai~~~i~la~~~g~~vhi~H~~~~~~~~~~~~~~~i~~A~~~G~~vt~e~~P~~~~ 273 (496)
T PRK09061 198 VPTYTHVRYGSNVE----PRSSFEAYQELIGLAAATGAHMHICHINSTSLQDIPLCAELVQTAQAQGLDVTTEAYPYGAG 273 (496)
T ss_pred CEEEEEECCCCCCC----HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 82899604677667----07799999999998887399479996436664567899999999997799688874156412
Q ss_pred CC--------HH-------------------------HHHC---CCCC--CCEEECCCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf 39--------78-------------------------8613---7888--311321346999999999999976994189
Q gi|254781012|r 201 IN--------RN-------------------------AIFH---DGLN--PHYYCLPIPKREKHRLSLRKAALSGNPRFF 242 (349)
Q Consensus 201 lt--------~~-------------------------d~~~---~~~~--~~~k~nPPlR~~~dr~aL~~ai~~G~i~d~ 242 (349)
T Consensus 274 ~t~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 351 (496)
T PRK09061 274 STVIGAAIFRDPGWQERMGVGYGDLQMVATGKRLTQEEFAKYQANDPGALVLMHFLDVENNPSDRALLDVSVLFPG--VA 351 (496)
T ss_pred CCHHHHHHCCCHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCC--CE
T ss_conf 1302012306937887628975665411134667899999874438884589950585458014899999842888--26
Q ss_pred EECCCCCCCHHHHHCCCCC-----CCC---CCHHHHHHH-HHH-HHH-CCCCHHHHHHHHHHCCHHHC-----CCC----
Q ss_conf 7138886531332154577-----544---543679999-999-972-06999999999824317881-----889----
Q gi|254781012|r 243 LGTDSAPHWDSSKESSCGC-----AGI---YTARNALNC-LAQ-IFE-EENKLENLESFVSINGATWY-----GIP---- 302 (349)
Q Consensus 243 I~TDHAPH~~eeK~~~~~~-----~g~---~~~~~~~~~-~~~-~~~-~~~~L~~l~~~~s~npa~~~-----gl~---- 302 (349)
T Consensus 352 i~sD~~~~~~~~~~~~~~~~~~~~~~~~~hp~~~g~~~~~l~~~vr~~~~lsLe~aV~~~T~~pA~~~~l~~~Gl~~rG~ 431 (496)
T PRK09061 352 IASDAMPWMLSDGKVYEGDAWPLPDDAVSHPRSAGTFARFLREYVRERKAVSLLEALRKCTLMPAQILENSVPAMRNKGR 431 (496)
T ss_pred EEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 98168522102544555655566666666774200489999998663685489999999989999988513357889736
Q ss_pred ---CCCCEEEEEECCC
Q ss_conf ---8885289994797
Q gi|254781012|r 303 ---VNTRKISLKRREQ 315 (349)
Q Consensus 303 ---~~~~~i~l~d~~~ 315 (349)
T Consensus 432 L~~G~~ADivIfDp~~ 447 (496)
T PRK09061 432 LQVGADADIVVFDPET 447 (496)
T ss_pred ECCCCCCCEEEECHHH
T ss_conf 3899817889988403