HHsearch alignment for GI: 254781012 and conserved domain: PRK09237
>PRK09237 dihydroorotase; Provisional.
Probab=99.79 E-value=2.3e-18 Score=133.05 Aligned_cols=291 Identities=16% Similarity=0.094 Sum_probs=127.8
Q ss_pred CEEEECCCCEEEEECCCHH-H--HHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEE-EEE
Q ss_conf 6558646642375088178-8--98749874188739998389514898989999999999983868846995013-452
Q gi|254781012|r 2 KKISLRVPDDWHLHLRDGE-I--LKTVLRDTAKNFRRALVMPNIDPPIITVDDACAYRQRILNALPPEYDFSPLMT-IYL 77 (349)
Q Consensus 2 ~~l~lp~~~D~HvH~Reg~-~--~~~t~aa~aGG~TtV~~MPNT~Ppi~t~e~~~~~~~r~~~~~~~~~~~~~~~~-~~l 77 (349)
T Consensus 52 G~~V~PG~ID~HvH~~~~~~~~~~~~~~~a~~~GvTTvvd~g~~~~--~~~~~---~~~~~~~~~~~~i~~~l~~~~~g~ 126 (384)
T PRK09237 52 GKYVSPGWIDLHVHVYPGSTIYGDEPDEVGVKSGVTTVVDAGSAGA--DNIDD---FRELTIEASKTRVLAFLNISRIGL 126 (384)
T ss_pred CCEECCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCC--CCHHH---HHHHHHHHCCCEEEEEECCCCCCC
T ss_conf 9997768827233888888766768668787558517860699985--53899---999985421441787631100046
Q ss_pred CCC--------CCHHHHHHHHH-C-CCEEEHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCH
Q ss_conf 789--------99889987440-6-8721022104551002565410068899999999873982220257555554300
Q gi|254781012|r 78 TET--------TDPDDVEKGFT-S-QLVQAIKLYFAGSTTNSHHGIRNIDRVMPVLERMETIGMPLCIHGEILNQDIDIF 147 (349)
Q Consensus 78 t~~--------~~~~~~~~~~~-~-~~~~~~k~~~~~~~~~~~~~v~~~~~~~~~le~~~~~~~~i~~H~E~~~~~~~~~ 147 (349)
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~k~~~~~~~~~-~---~~~~~~~~a~~~a~~~~~~~~vH~~~~~~~---- 198 (384)
T PRK09237 127 LAQDELANLRDIDADAVAEAVEKNPDFIVGIKARMSKSVVG-D---NGITPLELAKEIARENNLPLMVHIGNNPPD---- 198 (384)
T ss_pred CCCCCCCCHHHCCHHHHHHHHHHCCCCEEEEEEEECCCCCC-C---CCHHHHHHHHHHHHHCCCCEEEECCCCHHH----
T ss_conf 46755343322698999999986715567677752156336-5---544899999999987599679982897233----
Q ss_pred HHHHHHHHHHHHHHHHH-----HCCCEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCCCCCEEECCCCC
Q ss_conf 14676545789999962-----0695399705785899999870573320230231003978861378883113213469
Q gi|254781012|r 148 DRELMFIDKILDPLRNK-----LPNLKIILEHITTSNGIDYVNNATNIAGSITVHHLIINRNAIFHDGLNPHYYCLPIPK 222 (349)
Q Consensus 148 ~~E~~~~~~~l~~~~a~-----~~~~~iHi~HiST~~sv~lir~ak~vtaEVTPHHL~lt~~d~~~~~~~~~~k~nPPlR 222 (349)
T Consensus 199 ------~~~~~~~~~~g~~~~H~~~~~~~~~~~~~~~~~~~i~~a~~~G~~~~vgh------------g~~~------~- 253 (384)
T PRK09237 199 ------LDEVVELLRPGDILTHCFNGKPNGILTEDGELRPSVRRALERGVRLDVGH------------GTAS------F- 253 (384)
T ss_pred ------HHHHHHHHHCCCEEEEEECCCCCCEECCCCHHHHHHHHHHHCCCEEEEEC------------CCCC------C-
T ss_conf ------99999987469889997047788411465128899999997497899826------------8765------6-
Q ss_pred CHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHCCCC
Q ss_conf 99999999999976994189713888653133215457754454367999999997206999999999824317881889
Q gi|254781012|r 223 REKHRLSLRKAALSGNPRFFLGTDSAPHWDSSKESSCGCAGIYTARNALNCLAQIFEEENKLENLESFVSINGATWYGIP 302 (349)
Q Consensus 223 ~~~dr~aL~~ai~~G~i~d~I~TDHAPH~~eeK~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~l~~~~s~npa~~~gl~ 302 (349)
T Consensus 254 ---~~~~a~~~~~~G~~p~~i~tD~~~~~--~~~-----g~~~~l~~~~---~~~~~~Glsl~eav~~~T~nPA~~lGL~ 320 (384)
T PRK09237 254 ---SFKVARAAIAAGILPDTISTDIYCRN--RIN-----GPVYSLATTM---SKFLALGMPLEEVIAAVTKNAADALKLP 320 (384)
T ss_pred ---CHHHHHHHHHCCCCCCEECCCCCCCC--CCC-----CCEEHHHHHH---HHHHHCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf ---89999999866986636415656556--678-----7500199999---9999839999999999978999971998
Q ss_pred C-------CCCEEEEEECCC-CEEE---CHHHCCCCCCEEECCCCEEECCEEEE
Q ss_conf 8-------885289994797-1784---71122677771465797698338887
Q gi|254781012|r 303 V-------NTRKISLKRREQ-PIIF---DEKITTSTGSITIFNPIFPLYWEVML 345 (349)
Q Consensus 303 ~-------~~~~i~l~d~~~-~~~v---~~~~~~sk~~~tpF~~g~~l~w~V~~ 345 (349)
T Consensus 321 ~kG~I~~G~dADLVI~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 372 (384)
T PRK09237 321 EKGRLQVGADADLTIFTLKDGPFTLVDSEGDSLIAERLLTPLAA--VRGGKVYE 372 (384)
T ss_pred CCCCCCCCCCCCEEEEEEECCCEEEEECCCCEEEEEEEEEEEEE--EECCEEEE
T ss_conf 88863799966789998307954778589998973068868899--99999998