HHsearch alignment for GI: 254781012 and conserved domain: PRK09357
>PRK09357 pyrC dihydroorotase; Validated.
Probab=100.00 E-value=0 Score=468.56 Aligned_cols=328 Identities=20% Similarity=0.176 Sum_probs=265.1
Q ss_pred CEEEECCCCEEEEECCC------HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEE
Q ss_conf 65586466423750881------788987498741887399983895148989899999999999838688469950134
Q gi|254781012|r 2 KKISLRVPDDWHLHLRD------GEILKTVLRDTAKNFRRALVMPNIDPPIITVDDACAYRQRILNALPPEYDFSPLMTI 75 (349)
Q Consensus 2 ~~l~lp~~~D~HvH~Re------g~~~~~t~aa~aGG~TtV~~MPNT~Ppi~t~e~~~~~~~r~~~~~~~~~~~~~~~~~ 75 (349)
T Consensus 50 G~~V~PGfID~H~H~~~pg~~~~~~~~~g~~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 125 (425)
T PRK09357 50 GLVVAPGLVDLHVHLREPGQEYKETIETGTRAAAAGGFTTVVAMPNTNPVIDTPEVVEYVLDLAKEAG----VVDVLPVG 125 (425)
T ss_pred CCEECCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCC----CCEEEEEE
T ss_conf 99992498977716788997630036676899985780589616898777785999999998642048----51146752
Q ss_pred EECCCCCHHHHHHHHHCCCEEEHHHCCCCCEECC--CCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCC-------
Q ss_conf 5278999889987440687210221045510025--6541006889999999987398222025755555430-------
Q gi|254781012|r 76 YLTETTDPDDVEKGFTSQLVQAIKLYFAGSTTNS--HHGIRNIDRVMPVLERMETIGMPLCIHGEILNQDIDI------- 146 (349)
Q Consensus 76 ~lt~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~--~~~v~~~~~~~~~le~~~~~~~~i~~H~E~~~~~~~~------- 146 (349)
T Consensus 126 ~~t~~~~~~~l~~~~~l~~~--------g~~~~s~~~~~~~~~~~l~~~~~~a~~~~~~~~~h~e~~~l~~~~~~~~g~~ 197 (425)
T PRK09357 126 AITKGLAGEELTEFGALAEA--------GVVAFSDDGIPVQDARLMRRALEYAKKLDLLIAQHCEDPSLTEGGVMNEGIV 197 (425)
T ss_pred CCCCCCCHHHHHHHHHHHHC--------CEEEEECCCCEECCHHHHHHHHHHHHHCCCEEEECCCCHHHHHCHHHCCCCC
T ss_conf 13577650456777765425--------7479813992304589999999888645956997425233442202246863
Q ss_pred --------HHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHC----CCCCEEEECCCCCCCHHHHHCCCCCCC
Q ss_conf --------01467654578999996206953997057858999998705----733202302310039788613788831
Q gi|254781012|r 147 --------FDRELMFIDKILDPLRNKLPNLKIILEHITTSNGIDYVNNA----TNIAGSITVHHLIINRNAIFHDGLNPH 214 (349)
Q Consensus 147 --------~~~E~~~~~~~l~~~~a~~~~~~iHi~HiST~~sv~lir~a----k~vtaEVTPHHL~lt~~d~~~~~~~~~ 214 (349)
T Consensus 198 ~~~~~~~~~p~~~E~~~i~r~~~la~~~g~~~hi~H~ss~~~le~i~~ak~~G~~vt~e~~p~~l~~t~~~~~~--~~~~ 275 (425)
T PRK09357 198 AARLGLPGIPEVAEEVAIARDVLLAEETGARYHICHVSTAGSVELIRFAKALGIKVTAEVTPHHLLLTDEDLLT--YDGN 275 (425)
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEECHHHHHCCHHHHHC--CCCC
T ss_conf 12038999976788989999999887619926875146165899999999838975234145565289857623--6863
Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCC--CCCCCCHHHHHHHHHHH--HHCCCCHHHHHHH
Q ss_conf 1321346999999999999976994189713888653133215457--75445436799999999--7206999999999
Q gi|254781012|r 215 YYCLPIPKREKHRLSLRKAALSGNPRFFLGTDSAPHWDSSKESSCG--CAGIYTARNALNCLAQI--FEEENKLENLESF 290 (349)
Q Consensus 215 ~k~nPPlR~~~dr~aL~~ai~~G~i~d~I~TDHAPH~~eeK~~~~~--~~g~~~~~~~~~~~~~~--~~~~~~L~~l~~~ 290 (349)
T Consensus 276 ~k~~PpLr~~~~~~~l~~~l~~g~i-~~i~tDh~P~~~~~k~~~~~~~~~G~~g~e~~~~~~~~~~v~~~~lsle~~v~~ 354 (425)
T PRK09357 276 YKVNPPLRSKEDREALIEALKDGTI-DAIATDHAPHAEEEKECEFEAAPFGITGLETALSLLYTTLVKTGLLDLEQLLEK 354 (425)
T ss_pred EEECCCCCCHHHHHHHHHHHHCCCE-EEEEECCCCCCHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 2207986525569999999966988-999968888886773445000778987477689999999987599999999999
Q ss_pred HHHCCHHHCCCCC------CCCEEEEEECCCCEEECHHHCCCCCCEEECCCCEEECCEEEE
Q ss_conf 8243178818898------885289994797178471122677771465797698338887
Q gi|254781012|r 291 VSINGATWYGIPV------NTRKISLKRREQPIIFDEKITTSTGSITIFNPIFPLYWEVML 345 (349)
Q Consensus 291 ~s~npa~~~gl~~------~~~~i~l~d~~~~~~v~~~~~~sk~~~tpF~~g~~l~w~V~~ 345 (349)
T Consensus 355 ~T~nPAk~lGl~~G~i~~G~dADivi~Dp~~~~~v~~~~~~s~~~~sp~~-g~~~~g~v~~ 414 (425)
T PRK09357 355 LSINPARILGLPAGPLAEGEPADLVIFDPEAEWTVDGEDFASKGKNTPFI-GMKLKGKVVY 414 (425)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEECHHHCCCCCCCCCCC-CCEEEEEEEE
T ss_conf 97999999599877648999466899939997898756661768978815-9788889999