HHsearch alignment for GI: 254781012 and conserved domain: TIGR03583
>TIGR03583 EF_0837 probable amidohydrolase EF_0837/AHA_3915. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. These proteins resemble aminohydrolases (see pfam01979), including dihydroorotases. The function is unknown.
Probab=99.78 E-value=1.5e-17 Score=128.06 Aligned_cols=104 Identities=14% Similarity=0.075 Sum_probs=61.3
Q ss_pred CCCCC-HHHHHHHHHHHHCCCCEEEEECCCCCCCH--HHH--HCCCCC----------CCCCCHHHHHHH-HHHHHHCCC
Q ss_conf 34699-99999999999769941897138886531--332--154577----------544543679999-999972069
Q gi|254781012|r 219 PIPKR-EKHRLSLRKAALSGNPRFFLGTDSAPHWD--SSK--ESSCGC----------AGIYTARNALNC-LAQIFEEEN 282 (349)
Q Consensus 219 PPlR~-~~dr~aL~~ai~~G~i~d~I~TDHAPH~~--eeK--~~~~~~----------~g~~~~~~~~~~-~~~~~~~~~ 282 (349)
T Consensus 215 ~il~~~g~v~~~v~~A~~rGv~~d-vghg~~sfsf~~a~~a~~~g~~pdtistD~~~~~~~~gp~~~l~~~msk~l~~G~ 293 (365)
T TIGR03583 215 GILRETGEVKPSVLEAYNRGVILD-VGHGTASFSFHVAEKAKRAGIFPDTISTDIYIRNRINGPVYSLATVMSKFLALGY 293 (365)
T ss_pred CCCCCCCCHHHHHHHHHHCCEEEE-EECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 525778641389999986885999-8358765578899988636988874066533356668761205899999997499
Q ss_pred CHHHHHHHHHHCCHHHCCCCC-------CCCEEEEEECCC-CEEECHHH
Q ss_conf 999999998243178818898-------885289994797-17847112
Q gi|254781012|r 283 KLENLESFVSINGATWYGIPV-------NTRKISLKRREQ-PIIFDEKI 323 (349)
Q Consensus 283 ~L~~l~~~~s~npa~~~gl~~-------~~~~i~l~d~~~-~~~v~~~~ 323 (349)
T Consensus 294 sL~~vI~~~T~nPAk~l~L~~kG~L~~G~dADitIfdl~~~~~~~~D~~ 342 (365)
T TIGR03583 294 SLEEVIEKVTKNAAEILKLTQKGRLQEGYDADLTIFTVKAEPKKLTDSE 342 (365)
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEEECC
T ss_conf 9999999998899998498888752799856789999846954788589