HHsearch alignment for GI: 254781012 and conserved domain: cd01298
>cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.
Probab=99.62 E-value=1.5e-13 Score=103.25 Aligned_cols=108 Identities=19% Similarity=0.146 Sum_probs=60.3
Q ss_pred HHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCHHHH--HHHHHHHHHCCCCHHHHHHHHHHCCHHHCCCC-----
Q ss_conf 99999769941897138886531332154577544543679--99999997206999999999824317881889-----
Q gi|254781012|r 230 LRKAALSGNPRFFLGTDSAPHWDSSKESSCGCAGIYTARNA--LNCLAQIFEEENKLENLESFVSINGATWYGIP----- 302 (349)
Q Consensus 230 L~~ai~~G~i~d~I~TDHAPH~~eeK~~~~~~~g~~~~~~~--~~~~~~~~~~~~~L~~l~~~~s~npa~~~gl~----- 302 (349)
T Consensus 286 ~~~l~~~Gv~-v~igTD~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~s~~eal~~~T~n~A~~lgl~~~GsI 357 (411)
T cd01298 286 VPEMLEAGVN-VGLGTDGAASNNNL-------DMFEEMRLAALLQKLAHGDPTALPAEEALEMATIGGAKALGLDEIGSL 357 (411)
T ss_pred HHHHHHCCCC-EEEECCCCCCCCCC-------CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 9999875995-79956889889974-------689999999999997526777899999999999999999498997516
Q ss_pred --CCCCEEEEEECCCCEEEC-----HHHCCCCCCEEECCCCEEECCEEEEEC
Q ss_conf --888528999479717847-----112267777146579769833888741
Q gi|254781012|r 303 --VNTRKISLKRREQPIIFD-----EKITTSTGSITIFNPIFPLYWEVMLHD 347 (349)
Q Consensus 303 --~~~~~i~l~d~~~~~~v~-----~~~~~sk~~~tpF~~g~~l~w~V~~~~ 347 (349)
T Consensus 358 ~~Gk~ADlvi~D~d~~~~~~~~~~~~~~~~~~~~~~i~~--v~~~g~~v~~~ 407 (411)
T cd01298 358 EVGKKADLILIDLDGPHLLPVHDPISHLVYSANGGDVDT--VIVNGRVVMED 407 (411)
T ss_pred CCCCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCE--EEECCEEEEEC
T ss_conf 999826889997999765786697999770289998349--99999999999