HHsearch alignment for GI: 254781012 and conserved domain: cd01310

>cd01310 TatD_DNAse TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.
Probab=98.21  E-value=0.00051  Score=44.25  Aligned_cols=234  Identities=15%  Similarity=0.082  Sum_probs=104.9

Q ss_pred             CCEEEEECCC----HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCC---
Q ss_conf             6423750881----788987498741887399983895148989899999999999838688469950134527899---
Q gi|254781012|r    9 PDDWHLHLRD----GEILKTVLRDTAKNFRRALVMPNIDPPIITVDDACAYRQRILNALPPEYDFSPLMTIYLTETT---   81 (349)
Q Consensus         9 ~~D~HvH~Re----g~~~~~t~aa~aGG~TtV~~MPNT~Ppi~t~e~~~~~~~r~~~~~~~~~~~~~~~~~~lt~~~---   81 (349)
T Consensus         1 lIDsHcHL~~~~~~~d~~~vi~~a~~~gv~~ii~~~------~~~~~~~~~~~--la~~~~~i----~~~~GiHP~~~~~   68 (251)
T cd01310           1 LIDTHCHLDFPQFDADRDDVLARAREAGVIKIIVVG------TDLKSSKRALE--LAKKYDNV----YAAVGLHPHDADE   68 (251)
T ss_pred             CEEEEECCCCHHHCCCHHHHHHHHHHCCCCEEEEEC------CCHHHHHHHHH--HHHHCCCE----EEEECCCHHHHHH
T ss_conf             978504889814446999999999986998899968------99999999999--99759986----8982368376512


Q ss_pred             -C---HHHHHHHHHCCCEEEHHHCCCC-CEECCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             -9---8899874406872102210455-1002565410068899999999873982220257555554300146765457
Q gi|254781012|r   82 -D---PDDVEKGFTSQLVQAIKLYFAG-STTNSHHGIRNIDRVMPVLERMETIGMPLCIHGEILNQDIDIFDRELMFIDK  156 (349)
Q Consensus        82 -~---~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~v~~~~~~~~~le~~~~~~~~i~~H~E~~~~~~~~~~~E~~~~~~  156 (349)
T Consensus        69 ~~~~~~~~l~~~~~~~~~vaIGEiGLD~~~~~~~~-~~Q~~~F~~ql~lA~~~~lPv~iH~R~---------A~~~~l--  136 (251)
T cd01310          69 HVDEDLDLLELLAANPKVVAIGEIGLDYYRDKSPR-EVQKEVFRAQLELAKELNLPVVIHSRD---------AHEDVL--  136 (251)
T ss_pred             CCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCH-HHHHHHHHHHHHHHHHHCCCEEEEECC---------CHHHHH--
T ss_conf             35779999999972899069985014888889989-999999999999998757884898645---------479999--


Q ss_pred             HHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCCCCCEEECCCCC---CHHHHHHHHHH
Q ss_conf             899999620695399705785899999870573320230231003978861378883113213469---99999999999
Q gi|254781012|r  157 ILDPLRNKLPNLKIILEHITTSNGIDYVNNATNIAGSITVHHLIINRNAIFHDGLNPHYYCLPIPK---REKHRLSLRKA  233 (349)
Q Consensus       157 ~l~~~~a~~~~~~iHi~HiST~~sv~lir~ak~vtaEVTPHHL~lt~~d~~~~~~~~~~k~nPPlR---~~~dr~aL~~a  233 (349)
T Consensus       137 --~iL~~~~~~~~~v-~H~fsG-~~~~a~~~l~~---------------------G~yisi~g~it~~~~~~~~~-~~~~  190 (251)
T cd01310         137 --EILKEYGPPKRGV-FHCFSG-SAEEAKELLDL---------------------GFYISISGIVTFKNANELRE-VVKE  190 (251)
T ss_pred             --HHHHHCCCCCCEE-EEECCC-CHHHHHHHHHC---------------------CEEEECCCCCCCCHHHHHHH-HHHH
T ss_conf             --9999708887738-885689-99999986118---------------------90895374111424899999-9985


Q ss_pred             HHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHH--HCCCCHHHHHHHHHHCCHHHCC
Q ss_conf             976994189713888653133215457754454367999999997--2069999999998243178818
Q gi|254781012|r  234 ALSGNPRFFLGTDSAPHWDSSKESSCGCAGIYTARNALNCLAQIF--EEENKLENLESFVSINGATWYG  300 (349)
Q Consensus       234 i~~G~i~d~I~TDHAPH~~eeK~~~~~~~g~~~~~~~~~~~~~~~--~~~~~L~~l~~~~s~npa~~~g  300 (349)
T Consensus       191 iPldr--lllETDs-P~l~p~~-----~~g~~NeP~~i~~v~~~lA~i~~~~~~el~~~~~~N~~~lFG  251 (251)
T cd01310         191 IPLER--LLLETDS-PYLAPVP-----FRGKRNEPAYVKHVAEKIAELKGISVEEVAEVTTENAKRLFG  251 (251)
T ss_pred             CCCCE--EEEECCC-CCCCCCC-----CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
T ss_conf             99522--8982589-7778667-----799999728999999999988498999999999999998659