HHsearch alignment for GI: 254781012 and conserved domain: cd01313
>cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=98.86 E-value=1.1e-06 Score=60.71 Aligned_cols=37 Identities=14% Similarity=0.105 Sum_probs=30.0
Q ss_pred CHHHHHHHHHHCCHHHCCCC------CCCCEEEEEECCCCEEE
Q ss_conf 99999999824317881889------88852899947971784
Q gi|254781012|r 283 KLENLESFVSINGATWYGIP------VNTRKISLKRREQPIIF 319 (349)
Q Consensus 283 ~L~~l~~~~s~npa~~~gl~------~~~~~i~l~d~~~~~~v 319 (349)
T Consensus 348 ~~~~vl~mAT~~GA~aLgl~iGsLe~Gk~ADlvvvD~~~p~~~ 390 (418)
T cd01313 348 SARALLDAALAGGAQALGLATGALEAGARADLLSLDLDHPSLA 390 (418)
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCC
T ss_conf 8999999999999999689888778768307899889997657