HHsearch alignment for GI: 254781012 and conserved domain: pfam02126

Probab=96.25  E-value=0.092  Score=30.31  Aligned_cols=244  Identities=13%  Similarity=0.158  Sum_probs=105.3

Q ss_pred             HHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEECC-------CCCHHHHHHHHHCCCE
Q ss_conf             874987418873999838951489898999999999998386884699501345278-------9998899874406872
Q gi|254781012|r   23 KTVLRDTAKNFRRALVMPNIDPPIITVDDACAYRQRILNALPPEYDFSPLMTIYLTE-------TTDPDDVEKGFTSQLV   95 (349)
Q Consensus        23 ~~t~aa~aGG~TtV~~MPNT~Ppi~t~e~~~~~~~r~~~~~~~~~~~~~~~~~~lt~-------~~~~~~~~~~~~~~~~   95 (349)
T Consensus        42 ~el~~fk~~Gg~tiVd~T~~g-~GRd~~~l----~~is~~tGv--~IV~~TG~y~~~~~p~~~~~~s~e~la~~~i~ei~  114 (308)
T pfam02126        42 EELLYLKARGVRTIVENTTTG-LGRDVHTL----AWVARATGV--HIVAATGLYVDADHPLATRLRSVEELTDVFVREIE  114 (308)
T ss_pred             HHHHHHHHHCCCEEEECCCCC-CCCCHHHH----HHHHHHCCC--EEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHHH
T ss_conf             999999982898799568977-68699999----999996398--39974766678769876662699999999999998


Q ss_pred             E-----EHHHCCCCCEECCCCCCCHH--HHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HCC
Q ss_conf             1-----02210455100256541006--889999999987398222025755555430014676545789999962-069
Q gi|254781012|r   96 Q-----AIKLYFAGSTTNSHHGIRNI--DRVMPVLERMETIGMPLCIHGEILNQDIDIFDRELMFIDKILDPLRNK-LPN  167 (349)
Q Consensus        96 ~-----~~k~~~~~~~~~~~~~v~~~--~~~~~~le~~~~~~~~i~~H~E~~~~~~~~~~~E~~~~~~~l~~~~a~-~~~  167 (349)
T Consensus       115 ~Gi~~T~ikaG~Ik~~~-~~~~it~~E~k~lrAaA~A~~~TG~pI~~H~~~~~~-----~-----~~e~l~il~e~Gvd~  183 (308)
T pfam02126       115 HGIDGTGIKAGIIGEIG-TSWKLTPSEEKVLEAAAHAHAQTGCPVSTHTGASPR-----A-----GLQQIRILQEEGVDL  183 (308)
T ss_pred             HCCCCCCCCCEEEEEEC-CCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCC-----C-----HHHHHHHHHHCCCCH
T ss_conf             43668874520788830-589998789999999999999769937970798755-----5-----199999999859894


Q ss_pred             CEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCCCCCEEECCCC--CCHHHHHHHHHHHH-CCCCE-EEE
Q ss_conf             539970578589999987057332023023100397886137888311321346--99999999999997-69941-897
Q gi|254781012|r  168 LKIILEHITTSNGIDYVNNATNIAGSITVHHLIINRNAIFHDGLNPHYYCLPIP--KREKHRLSLRKAAL-SGNPR-FFL  243 (349)
Q Consensus       168 ~~iHi~HiST~~sv~lir~ak~vtaEVTPHHL~lt~~d~~~~~~~~~~k~nPPl--R~~~dr~aL~~ai~-~G~i~-d~I  243 (349)
T Consensus       184 ~rvvigH~D~~~D~~y~~~la~~G~~l-----~fD---~~G~~-~~~~~~~~~~~~~~d~~r~~~i~~Li~~Gy~drIlL  254 (308)
T pfam02126       184 SRVVIGHCDDIDDLKYLLELAALGCYL-----GYD---LFGTE-LLGYQLSPDIDIPPDQKRIRRVHALVDRGYEDRILL  254 (308)
T ss_pred             HHEEEECCCCCCCHHHHHHHHHCCCEE-----EEC---CCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEE
T ss_conf             467885268889989999999749789-----853---56621-233444555689998999999999997798574897


Q ss_pred             ECCCCCCCHHHHHCCCCCCCC---CCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHC
Q ss_conf             138886531332154577544---54367999999997206999999999824317881
Q gi|254781012|r  244 GTDSAPHWDSSKESSCGCAGI---YTARNALNCLAQIFEEENKLENLESFVSINGATWY  299 (349)
Q Consensus       244 ~TDHAPH~~eeK~~~~~~~g~---~~~~~~~~~~~~~~~~~~~L~~l~~~~s~npa~~~  299 (349)
T Consensus       255 S~D~~~k~~---~~~~gg~g~g~~~i~~~~iP~L---~~~Gv~~~~i~~ilv~NP~r~l  307 (308)
T pfam02126       255 SHDITTKFR---SMKYGGHGYSPDLILTNVIPKL---RQRGVTQEVLDKILVENPKQFL  307 (308)
T ss_pred             ECCCCCCCC---CEECCCCCCCHHHHHHHHHHHH---HHCCCCHHHHHHHHHHCHHHHC
T ss_conf             256454002---1013898864688999888999---9869999999999987869762