HHsearch alignment for GI: 254781012 and conserved domain: pfam07969

Probab=98.82  E-value=6.1e-08  Score=68.56  Aligned_cols=165  Identities=15%  Similarity=0.143  Sum_probs=81.8

Q ss_pred             CCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHH-HHHHCCCEEEEECCCHHHHHHHHHHCCCCC
Q ss_conf             1006889999999987398222025755555430014676545789999-962069539970578589999987057332
Q gi|254781012|r  113 IRNIDRVMPVLERMETIGMPLCIHGEILNQDIDIFDRELMFIDKILDPL-RNKLPNLKIILEHITTSNGIDYVNNATNIA  191 (349)
Q Consensus       113 v~~~~~~~~~le~~~~~~~~i~~H~E~~~~~~~~~~~E~~~~~~~l~~~-~a~~~~~~iHi~HiST~~sv~lir~ak~vt  191 (349)
T Consensus       209 ~~~~~~~~~~v~~a~~~G~~v~~Ha~gd~-----------ai~~~l~a~~~~~~~~~~i~H~~~~~~~~~~~~~~-lg~~  276 (392)
T pfam07969       209 IDDAEELEELVAAAHAAGLQVRVHASGDA-----------AIDAVLNAYEAVLADLGRLIHAGVATTDTIDRAAE-LGLR  276 (392)
T ss_pred             CCCHHHHHHHHHHHHHCCCEEEEEECCHH-----------HHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHH-CCCC
T ss_conf             79999999999999986994799855426-----------79999999999765468763013389889999998-2981


Q ss_pred             EEEECCCCCCCHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCHHHHH
Q ss_conf             02302310039788613788831132134699999999999997699418971388865313321545775445436799
Q gi|254781012|r  192 GSITVHHLIINRNAIFHDGLNPHYYCLPIPKREKHRLSLRKAALSGNPRFFLGTDSAPHWDSSKESSCGCAGIYTARNAL  271 (349)
Q Consensus       192 aEVTPHHL~lt~~d~~~~~~~~~~k~nPPlR~~~dr~aL~~ai~~G~i~d~I~TDHAPH~~eeK~~~~~~~g~~~~~~~~  271 (349)
T Consensus       277 ~~~~p~~~~~~~~~~~~-~~~-------~~r~-~~~~p~~~l~~~Gv-~v~~gsD~-pv~~~---~P~-----~~~~~a~  337 (392)
T pfam07969       277 ADTQPHFLAYDGYWDRS-RLG-------PERA-RGSLPIKLLLNAGV-KVALGSDA-PVATY---DPW-----SGIGAAV  337 (392)
T ss_pred             EEECCCEECCCCHHHHH-CCC-------HHHH-HCCCHHHHHHHCCC-EEEEECCC-CCCCC---CHH-----HHHHHHH
T ss_conf             56113410353046652-242-------7776-41344999997598-89973789-88886---779-----9999985


Q ss_pred             H--------HHHHHHHCCCCHHHHHHHHHHCCHHHCCCCCCCCEE
Q ss_conf             9--------999997206999999999824317881889888528
Q gi|254781012|r  272 N--------CLAQIFEEENKLENLESFVSINGATWYGIPVNTRKI  308 (349)
Q Consensus       272 ~--------~~~~~~~~~~~L~~l~~~~s~npa~~~gl~~~~~~i  308 (349)
T Consensus       338 ~r~~~~~~~~~~~~~~~~ls~~eAl~~~T~~~A~~~g~e~~~Gsi  382 (392)
T pfam07969       338 MRRTAEMLEGRVLKPDERLSLEEALALYTRGPAYALGLEDRKGTL  382 (392)
T ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             157766788766582568799999999999999994876787165