RPSBLAST alignment for GI: 254781012 and conserved domain: TIGR00856

>gnl|CDD|129935 TIGR00856, pyrC_dimer, dihydroorotase, homodimeric type. This homodimeric form of dihydroorotase is less common in microbial genomes than a related dihydroorotase that appears in a complex with aspartyltranscarbamoylase or as a homologous domain in multifunctional proteins of pyrimidine biosynthesis in higher eukaryotes. Length = 341

 Score =  414 bits (1065), Expect = e-116
 Identities = 176/316 (55%), Positives = 237/316 (75%), Gaps = 1/316 (0%)

Query: 3   KISLRVPDDWHLHLRDGEILKTVLRDTAKNFRRALVMPNIDPPIITVDDACAYRQRILNA 62
           ++++R PDDWHLHLRDG +LK VL  T++ F RA+VMPN+ PP+ TV+ A AYR+RIL+A
Sbjct: 1   ELTIRRPDDWHLHLRDGAMLKAVLPYTSEIFSRAIVMPNLAPPVTTVEAAVAYRERILDA 60

Query: 63  LPPEYDFSPLMTIYLTETTDPDDVEKGFTSQLVQAIKLYFAGSTTNSHHGIRNIDRVMPV 122
           +P  +DF+PLMT+YLT++  P+++E+     +V+A+KLY AG+TTNS HG+ +ID +MPV
Sbjct: 61  VPAGHDFTPLMTLYLTDSLTPEELERAKNEGVVRAVKLYPAGATTNSSHGVTDIDAIMPV 120

Query: 123 LERMETIGMPLCIHGEILNQDIDIFDRELMFIDKILDPLRNKLPNLKIILEHITTSNGID 182
           LE ME IG+PL +HGE+ + DIDIFDRE  FI+ +L+PLR + P LK++LEHITT + ID
Sbjct: 121 LEAMEKIGLPLLLHGEVTHGDIDIFDREARFIESVLEPLRQRFPALKVVLEHITTKDAID 180

Query: 183 YVNNATN-IAGSITVHHLIINRNAIFHDGLNPHYYCLPIPKREKHRLSLRKAALSGNPRF 241
           YV +  N +A +IT  HL+  RN +   G+NPH YCLPI KR  H+ +L + A SG P+F
Sbjct: 181 YVEDGNNRLAATITPQHLMFTRNDLLGGGVNPHLYCLPILKRNIHQQALLELAASGFPKF 240

Query: 242 FLGTDSAPHWDSSKESSCGCAGIYTARNALNCLAQIFEEENKLENLESFVSINGATWYGI 301
           FLGTDSAPH    KESSCGCAG ++A  AL   A++FEE N LENLE+F S NG  +YG+
Sbjct: 241 FLGTDSAPHARHRKESSCGCAGCFSAPTALPSYAEVFEEMNALENLEAFCSDNGPQFYGL 300

Query: 302 PVNTRKISLKRREQPI 317
           PVN+ KI L ++EQ I
Sbjct: 301 PVNSTKIELVKKEQQI 316