BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781013|ref|YP_003065426.1| phage-associated protein
[Candidatus Liberibacter asiaticus str. psy62]
(302 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254781013|ref|YP_003065426.1| phage-associated protein [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040690|gb|ACT57486.1| phage-associated protein [Candidatus Liberibacter asiaticus str.
psy62]
Length = 302
Score = 625 bits (1613), Expect = e-177, Method: Compositional matrix adjust.
Identities = 302/302 (100%), Positives = 302/302 (100%)
Query: 1 MKKRTFTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDE 60
MKKRTFTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDE
Sbjct: 1 MKKRTFTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDE 60
Query: 61 EPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHS 120
EPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHS
Sbjct: 61 EPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHS 120
Query: 121 TEQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKMADGSNISPENVVEQIKKPVRFD 180
TEQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKMADGSNISPENVVEQIKKPVRFD
Sbjct: 121 TEQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKMADGSNISPENVVEQIKKPVRFD 180
Query: 181 SDSEFATLESQLVKGFKSMPPQLTKEFQEAQVQIKKDSAIARSIQESNIMRFAYSNRSFW 240
SDSEFATLESQLVKGFKSMPPQLTKEFQEAQVQIKKDSAIARSIQESNIMRFAYSNRSFW
Sbjct: 181 SDSEFATLESQLVKGFKSMPPQLTKEFQEAQVQIKKDSAIARSIQESNIMRFAYSNRSFW 240
Query: 241 VTIVWITIIVAFLLTQIINSNVFAQLCESKYIATVVSLSAIICGFWAIVGKGLFGVHNDT 300
VTIVWITIIVAFLLTQIINSNVFAQLCESKYIATVVSLSAIICGFWAIVGKGLFGVHNDT
Sbjct: 241 VTIVWITIIVAFLLTQIINSNVFAQLCESKYIATVVSLSAIICGFWAIVGKGLFGVHNDT 300
Query: 301 QP 302
QP
Sbjct: 301 QP 302
>gi|294502072|ref|YP_003566137.1| phage-associated protein [Salinibacter ruber M8]
gi|294342056|emb|CBH22721.1| phage-associated protein [Salinibacter ruber M8]
Length = 170
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 76/149 (51%), Gaps = 8/149 (5%)
Query: 9 TNPPYSTIAVANFFIDKGVKYSI--PIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWK 66
++PPY +AVANFFID V+ P+ LK+Q+ +Y+ H + + ++ E +AW+
Sbjct: 2 SSPPYPAVAVANFFIDTAVEDPDVGPVTQLKLQKLVYIAHGWHLAIYDEHLIKEPVEAWE 61
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIMD-LSFRIFPKI-----ANQEIGEIMESIWNKYQSHS 120
GPV +Y R + S PI +D S R P++ +++ + S+W Y+ +S
Sbjct: 62 FGPVVRDLYSRAGDYGSDPISDRLDGTSSRSAPELLEIPSSDERTRNFLRSVWQTYREYS 121
Query: 121 TEQLQEIVQEENKTWRRLYDPNDPNTNRT 149
+L I +E+ W ++ N+T
Sbjct: 122 AVELTSITHKEDTPWYDTWERRGGKENKT 150
>gi|260910168|ref|ZP_05916845.1| phage protein [Prevotella sp. oral taxon 472 str. F0295]
gi|260635672|gb|EEX53685.1| phage protein [Prevotella sp. oral taxon 472 str. F0295]
Length = 174
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 75/137 (54%), Gaps = 11/137 (8%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLD---EEPQAWKQGPV 70
+ ++VAN+FI+ + + LK+ + +Y+ + + +S++D ++ +AW+ GPV
Sbjct: 4 NALSVANYFIELAKNDKVDVRPLKLMKLVYMAYGYALAIIDRSIIDPRFDKVEAWRYGPV 63
Query: 71 FVGVYHRFKYFDSHPI---EVIMDLSFR-----IFPKIANQEIGEIMESIWNKYQSHSTE 122
VYH FK + ++P+ V+M+ S + + PK+ ++ ++ + +W +Y+ HS
Sbjct: 64 IPSVYHSFKQYRNNPVTEKTVVMEPSDKYEVKFVEPKLEDKSARKVCDFVWKRYRDHSDS 123
Query: 123 QLQEIVQEENKTWRRLY 139
L ++ E W ++Y
Sbjct: 124 GLVSLLHGEATPWAQVY 140
>gi|262381010|ref|ZP_06074148.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262296187|gb|EEY84117.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 169
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 76/141 (53%), Gaps = 16/141 (11%)
Query: 14 STIAVANFFIDKGVKYSIP--IDHLKIQQFIYLTHCDVVLQKKKSMLDE---EPQAWKQG 68
IA+AN+FIDK + P + L++ +++Y+ + + +S+L+E + +AW+ G
Sbjct: 4 DAIAIANYFIDKAKETYPPYELTLLRLVKYVYIAYGFGLALLDRSILNERFDKVEAWRYG 63
Query: 69 PVFVGVYHRFKYFDSHPI----------EVIMDLSFRIFPKIANQEIGEIMESIWNKYQS 118
PV VYH FK+ + PI + +L F + PK+ ++ I I++ +W++Y+
Sbjct: 64 PVIPSVYHSFKHNQNRPITDKSSILSYEDDNGNLYFDV-PKVKDEGIIMILDFVWDRYKD 122
Query: 119 HSTEQLQEIVQEENKTWRRLY 139
S L EI+ ++ W+ Y
Sbjct: 123 KSVHDLIEILHKDGTPWKFCY 143
>gi|146302603|ref|YP_001197194.1| phage-associated protein [Flavobacterium johnsoniae UW101]
gi|146157021|gb|ABQ07875.1| Uncharacterized phage-associated protein [Flavobacterium johnsoniae
UW101]
Length = 149
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 8/146 (5%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
Y+ +A +FI+ + +D +K+ + Y++H + K + D E QAWK G V
Sbjct: 2 YNCFDIAKYFIELAEEEGQGLDPMKLLKLTYISHGWHLGITGKPLFDNEVQAWKYGSVIP 61
Query: 73 GVYHRFKYFDSHPIE-VIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
+Y+ + F P++ ++++S + K QE E ++ IWN Y+ S QL + EE
Sbjct: 62 DLYYEIRMFGKDPVDPFLINISAKTPLK---QEDKEFLKKIWNNYKGLSGLQLSALTHEE 118
Query: 132 NKTWRRLYDPNDPNTNRTITVEEITK 157
W + +D T+ I +I K
Sbjct: 119 GSPWSQTWD----GTHNVIIGNDIIK 140
>gi|121608301|ref|YP_996108.1| hypothetical protein Veis_1323 [Verminephrobacter eiseniae EF01-2]
gi|121552941|gb|ABM57090.1| conserved hypothetical protein [Verminephrobacter eiseniae EF01-2]
Length = 161
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 10/137 (7%)
Query: 9 TNPPYSTIAVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQ 67
+P YS A+AN F+ K + +IP + +K+Q+ +Y T + + +LD+ WK
Sbjct: 2 AHPEYSAFAIANAFVQKAGQGAIPNLTPMKLQKLLYFTQAWHLKVRGFPLLDDHFARWKH 61
Query: 68 GPVFVGVYHRFKYFDSHPIE------VIMDLSFRI---FPKIANQEIGEIMESIWNKYQS 118
GPV VYH F+ + PI + D + + +A+++ ++++I ++Y +
Sbjct: 62 GPVIPAVYHEFRAYGHRPITRKATTLAMSDDDYAVKIPMVPLADRDTWGLIDAIIDRYGA 121
Query: 119 HSTEQLQEIVQEENKTW 135
++L + E W
Sbjct: 122 VDAQELSRMTHLEGSAW 138
>gi|291458021|ref|ZP_06597411.1| putative prophage protein [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291419353|gb|EFE93072.1| putative prophage protein [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 156
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 14/137 (10%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
YS +AN+F+ KG + H K+Q+ Y K + D + QAW GPV
Sbjct: 12 YSVFDIANWFLSKG-----EMTHKKLQKLCYYAQAWCYALKGYRLEDTDYQAWIHGPVSP 66
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
++ RFK F PI++ + RI P E ++ +W+ Y ++ L+ + E
Sbjct: 67 ALWERFKSFAYDPIKIKGTVRLRIDP-----EDEALLNDVWDTYGENTGNALETLTHRE- 120
Query: 133 KTW---RRLYDPNDPNT 146
W RR Y+P++ T
Sbjct: 121 LPWIEARRGYEPDERCT 137
>gi|16127745|ref|NP_422309.1| hypothetical protein CC_3515 [Caulobacter crescentus CB15]
gi|221236566|ref|YP_002519003.1| hypothetical protein CCNA_03630 [Caulobacter crescentus NA1000]
gi|13425245|gb|AAK25477.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220965739|gb|ACL97095.1| hypothetical protein CCNA_03630 [Caulobacter crescentus NA1000]
Length = 188
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 10/149 (6%)
Query: 17 AVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYH 76
AVAN +DK IPI +L +Q+ +Y H ++ K + +++ +AWK GPV VY
Sbjct: 15 AVANLLLDKAAALDIPISNLALQKLLYFAHGRFLVDKGRPLVNGFFEAWKFGPVHPVVYR 74
Query: 77 RF-----KYFDSHPI--EVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
F KY + I +++ L + P +Q+I E +E + S QL +
Sbjct: 75 CFSANGPKYIINRAIKKDILSGLHIIVSPP-RDQDIHEGIERVLLTMGRMSASQLVAVSH 133
Query: 130 EENKTWRRLYDPNDPNTNRTITVEEITKM 158
W + N P TN + + K+
Sbjct: 134 ASGGPWDVIA--NGPGTNLGLGLRICDKV 160
>gi|229588705|ref|YP_002870824.1| hypothetical protein PFLU1166 [Pseudomonas fluorescens SBW25]
gi|229360571|emb|CAY47428.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 164
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 12/134 (8%)
Query: 13 YSTIAVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
YS +AVAN FI++ + + + +K+Q+ ++ T + +++ ++D+ W+ GPV
Sbjct: 5 YSALAVANAFIERAKEGKLSGLTPMKLQKLLFYTQSWHLRERELPLMDDHFARWQYGPVI 64
Query: 72 VGVYHRFKYFDSHPIEVIM--------DLSFRIFPKIANQEI--GEIMESIWNKYQSHST 121
+YH K + S P+ ++ D+ F + P+I + +++ I NKY S
Sbjct: 65 PSLYHELKSYGSRPVTSLLSNLKPDVEDIVF-VTPRIPESDTYAQRLIDRIINKYGKWSG 123
Query: 122 EQLQEIVQEENKTW 135
QL + EE W
Sbjct: 124 TQLSNLSHEEGTAW 137
>gi|307271322|ref|ZP_07552601.1| hypothetical protein HMPREF9514_00077 [Enterococcus faecalis
TX0855]
gi|306512071|gb|EFM81062.1| hypothetical protein HMPREF9514_00077 [Enterococcus faecalis
TX0855]
Length = 182
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
PY + VA++ ID K+ I I++LK+Q+ +Y +++ + ++DEE Q WK GPV
Sbjct: 4 PYLAMYVADYIIDYCNKHDIEINNLKLQKVMYYLQAKSLVETNEPLIDEELQKWKYGPVV 63
Query: 72 VGVYHRFK 79
VYH +K
Sbjct: 64 PTVYHEYK 71
>gi|71274687|ref|ZP_00650975.1| similar to Uncharacterized phage-associated protein [Xylella
fastidiosa Dixon]
gi|71902094|ref|ZP_00684130.1| similar to Uncharacterized phage-associated protein [Xylella
fastidiosa Ann-1]
gi|170730076|ref|YP_001775509.1| phage-associated protein-like protein [Xylella fastidiosa M12]
gi|71164419|gb|EAO14133.1| similar to Uncharacterized phage-associated protein [Xylella
fastidiosa Dixon]
gi|71728139|gb|EAO30334.1| similar to Uncharacterized phage-associated protein [Xylella
fastidiosa Ann-1]
gi|167964869|gb|ACA11879.1| Uncharacterized phage-associated protein-like protein [Xylella
fastidiosa M12]
Length = 173
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
PY +AN F+ K + + L++ + +YL H + ++ ++DE +AW+ GPV
Sbjct: 2 PYLPTIIANDFLQKASQEGRALTPLQVLKLVYLAHGWCLGVHRQPLIDEPVEAWRAGPVI 61
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIA--NQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
+Y+ K + S+ I + + + + + + I+ S+W Y+ + +L EI +
Sbjct: 62 RSLYNAIKQYGSNAITERLPVRWFSWGRALKIDATAAAILASVWVTYRRYGGVELAEITR 121
Query: 130 EENKTW 135
E W
Sbjct: 122 AEGSPW 127
>gi|90022360|ref|YP_528187.1| phage-associated protein-like protein [Saccharophagus degradans
2-40]
gi|89951960|gb|ABD81975.1| Uncharacterized phage-associated protein-like protein
[Saccharophagus degradans 2-40]
Length = 159
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 10/158 (6%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+S I VA F+ K + +++Q+ +Y+ H + ++ ++ AWK GPV
Sbjct: 4 HSAIDVAYKFLQKAASEGGSLTPMQLQKLVYIAHGCSLGWCDAPLIKDDVYAWKFGPVIE 63
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIAN--QEIGEIMESIWNKYQSHSTEQLQEIVQE 130
+YH FK F + ++V D + A EI++++WN Y+ +S QL ++ +
Sbjct: 64 DLYHCFKRFRADEVQVT-DKQIEAMVEAAGFSDAEDEIIDAVWNNYKHYSGPQLSDLTHQ 122
Query: 131 ENKTWRRLYDPNDPN------TNRTITVEEITKMADGS 162
W + + D + NRTI E M G+
Sbjct: 123 PGTPWYQTWRHGDSSYAGAVIDNRTI-AEHYKHMLAGA 159
>gi|117676333|ref|YP_863932.1| hypothetical protein BPSphi5223_0049 [Burkholderia phage phi52237]
gi|117670160|gb|ABK56726.1| conserved hypothetical protein [Burkholderia phage phi52237]
Length = 157
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 36 LKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFR 95
L IQ+ Y H + + +++E +AW+ GPV G+YH K F S+PI L
Sbjct: 28 LAIQKLAYFCHGWHLALSGEPLVNEPFEAWRFGPVLPGLYHTLKVFSSNPIPANHPLVIS 87
Query: 96 IFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYD--PNDPNTNRTITV 152
A G++++ + N Y ST QL I + W++++ P+ TN +I
Sbjct: 88 QASLPAGSWSGQLIDHVLNVYGGLSTTQLVSISHASDGPWQQVWSQGPSSWITNESIAT 146
>gi|330874252|gb|EGH08401.1| phage-associated protein [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
Length = 196
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+S ++AN+F++ I +K+Q+ +Y H + +++E +AW+ GPV
Sbjct: 33 FSAKSIANYFLELAAASGQSISPMKLQKLVYYAHGWYSGYTDRPLINEPVEAWQYGPVIP 92
Query: 73 GVYHRFKYFDSHPIEVIM----DLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIV 128
+YH FK F S I+ L R ++ + +++++N Y +S +L E+
Sbjct: 93 SLYHEFKRFGSGDIQCKAFDYDALGVREAATPSDPNVRTFLQNVFNSYGKYSGIRLSEMT 152
Query: 129 QEENKTW 135
W
Sbjct: 153 HASGTPW 159
>gi|153871345|ref|ZP_02000541.1| phage-associated protein [Beggiatoa sp. PS]
gi|152072191|gb|EDN69461.1| phage-associated protein [Beggiatoa sp. PS]
Length = 173
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 12 PYSTIAVANFFIDKGV-KYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV 70
PYS+ AVAN FI K K I +K+Q+ +Y H + + + EE QAWK GPV
Sbjct: 4 PYSSKAVANSFILKAKEKGCTDISPMKLQKLVYFAHGWFMAFTDQEFIKEEVQAWKFGPV 63
Query: 71 FVGVYHRFKYFDSHPIEVIM-DLSFR------IFPKI--ANQEIGEIMESIWNKYQSHST 121
+Y FK + + IE++ +L F I P I + + I+ +W Y +
Sbjct: 64 IPDIYFEFKEYGNSNIEILAKELRFTGSKLELITPNIDDDDDDANRIINEVWRAYGEFTP 123
Query: 122 EQLQEIVQEENKTWR 136
QL I + W
Sbjct: 124 IQLSNITHAKGSPWE 138
>gi|330970699|gb|EGH70765.1| phage-associated protein [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 165
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+S ++AN+F++ I +K+Q+ +Y H + +++E +AW+ GPV
Sbjct: 2 FSAKSIANYFLELAAASGQSISPMKLQKLVYYAHGWYSGYTDRPLINEPVEAWQYGPVIP 61
Query: 73 GVYHRFKYFDSHPIEVIM----DLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIV 128
+YH FK F S I+ L R ++ + +++++N Y +S +L E+
Sbjct: 62 SLYHEFKRFGSGDIQCKAFDYDALGVREAATPSDPNVRTFLQNVFNSYGKYSGIRLSEMT 121
Query: 129 QEENKTW 135
W
Sbjct: 122 HASGTPW 128
>gi|322433755|ref|YP_004215967.1| phage-associated protein-like protein [Acidobacterium sp. MP5ACTX9]
gi|321161482|gb|ADW67187.1| phage-associated protein-like protein [Acidobacterium sp. MP5ACTX9]
Length = 161
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
P+ AVAN +D+ + + + IQ+ +Y H + ++ + +AW+ GPV
Sbjct: 2 PFPATAVANELLDRASAEGLSLTQINIQKLVYFAHGWNLGWSANPLILDPIEAWQYGPVV 61
Query: 72 VGVYHRFKYFDSHPI-----EVIMDLSFRI---FPKIANQEIGEIMESIWNKYQSHSTEQ 123
+Y++F+ F S PI E +D + +I P + + ++ ++WN+Y +
Sbjct: 62 RNLYNQFRRFGSSPITGKAVEFRIDSNGKIGTTCPTLEDAYSKSVVGAVWNQYGRLQPFK 121
Query: 124 LQEIVQEENKTWRRLYD 140
L E+ W ++
Sbjct: 122 LVELTHAPGSPWEAAWN 138
>gi|315497342|ref|YP_004086146.1| phage-associated protein-like protein [Asticcacaulis excentricus CB
48]
gi|315415354|gb|ADU11995.1| uncharacterized phage-associated protein-like protein
[Asticcacaulis excentricus CB 48]
Length = 159
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 11 PPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV 70
P +S A+AN F+ P+D +K+Q+ +Y+ H + ++ ++ + +AW GPV
Sbjct: 2 PGHSATAIANEFVRLN---GGPLDQMKLQKLVYMAHGWNLALNQEPLVKDRIEAWDGGPV 58
Query: 71 FVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGE---IMESIWNKYQSHSTEQLQEI 127
F ++ K+F ++D F P N +++ +W KY+ ++ L E+
Sbjct: 59 FRAIWDHIKFFGISGSGFLVD-PFARNPITTNALTPNERAVIDHVWKKYKPYTGHMLSEM 117
Query: 128 VQEENKTWRRLY 139
+ W Y
Sbjct: 118 THQRGTPWYNSY 129
>gi|319942310|ref|ZP_08016625.1| hypothetical protein HMPREF9464_01844 [Sutterella wadsworthensis
3_1_45B]
gi|319942641|ref|ZP_08016949.1| hypothetical protein HMPREF9464_02168 [Sutterella wadsworthensis
3_1_45B]
gi|319803820|gb|EFW00752.1| hypothetical protein HMPREF9464_02168 [Sutterella wadsworthensis
3_1_45B]
gi|319804183|gb|EFW01083.1| hypothetical protein HMPREF9464_01844 [Sutterella wadsworthensis
3_1_45B]
Length = 157
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 5/126 (3%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
P ++ V + +D K I ++ K+Q+ +Y + + Q + E PQAW+ GPVF
Sbjct: 10 PLDSLQVMAYIVDMCRKQHIEVNVTKLQKLLYCCYGVALAQLGIRLTKESPQAWQYGPVF 69
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
+YF HPIE + D S + A+ E+ +++ + S QL +
Sbjct: 70 PKT---LEYFRKHPIESLTDSS--VLESTASDELKKLLIGTLTYFGQFSASQLSTWSHQI 124
Query: 132 NKTWRR 137
W R
Sbjct: 125 GSPWYR 130
>gi|312897856|ref|ZP_07757271.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
gi|310621055|gb|EFQ04600.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
Length = 217
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 69/132 (52%), Gaps = 10/132 (7%)
Query: 15 TIAVANFFIDKGVKYSIPID----HLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV 70
I VA FFI+ + S+P D +L++ + +Y + + + + ++ +AWK GPV
Sbjct: 39 AIDVARFFIN--IVNSLPTDDLMTNLRVNKLLYFAQGECLKKLGHPLFTDDIEAWKYGPV 96
Query: 71 FVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
VY ++K + +PI+ + S F ++E E++ + + Y S+ L ++ +
Sbjct: 97 VPSVYEQYKSLEKNPIQESIPYSKGAF----SEEERELLFDVASYYGQISSSALVKMSHQ 152
Query: 131 ENKTWRRLYDPN 142
+ W+++YDPN
Sbjct: 153 KGSPWQQVYDPN 164
>gi|251791488|ref|YP_003006209.1| hypothetical protein Dd1591_3930 [Dickeya zeae Ech1591]
gi|247540109|gb|ACT08730.1| conserved hypothetical protein [Dickeya zeae Ech1591]
Length = 174
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 20/166 (12%)
Query: 13 YSTIAVANFFIDKGVKYSI-PIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
YS I+VAN I+K I + +K+Q+ +Y H ++ ++ +++E +AWK GPV
Sbjct: 3 YSAISVANSLIEKAKNRGITDLTPMKLQKLVYFAHAWMLAIDERPLINETVKAWKFGPVI 62
Query: 72 VGVYHRFKYFDSHPIEV---------------IMDLSFRIFPKI--ANQEIGEIMESIWN 114
VYH FK + + I+ + D+ F I P + ++ +M++I +
Sbjct: 63 DSVYHEFKAYGAKNIDSFGTEFDLIDAEDNGGVPDVGF-ITPYVDSSDTRAHSVMDAILD 121
Query: 115 KYQSHSTEQLQEIVQEENKTWRRLYDPNDPNTNRTITVE-EITKMA 159
Y S L + + W + + R ++ EI K A
Sbjct: 122 TYGDKSATFLSNLTHAPDSAWSITKSDHHDGSRRGFVIDNEIIKSA 167
>gi|115334623|ref|YP_764469.1| GepA protein [Geobacillus phage GBSV1]
gi|155042929|ref|YP_001425596.1| GepA [Bacillus virus 1]
gi|84688573|gb|ABC61269.1| GepA protein [Geobacillus phage GBSV1]
gi|115529833|gb|ABJ09612.1| GepA [Bacillus virus 1]
Length = 249
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 31 IPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIM 90
IP HLK+Q+ +Y + + +L+ + + E A+K GPV V+H++K S I+
Sbjct: 106 IPSSHLKLQKLLYFAYAEFLLRTGEKLFREPILAFKYGPVVESVFHKYKVHGSSIIDYKE 165
Query: 91 DLSFRIFP----------KIANQEIGEI----MESIWNKYQSHSTEQLQEIVQEENKTWR 136
D + I+P KIA+ E G I + ++ KY S ++L W
Sbjct: 166 DETVCIYPEELAVTPSFMKIASSEHGLIALDCLIDVFEKYGHLSAQELVYKTHRPGGPWD 225
Query: 137 RLYDPN 142
R+Y P
Sbjct: 226 RVYKPG 231
>gi|119383205|ref|YP_914261.1| hypothetical protein Pden_0451 [Paracoccus denitrificans PD1222]
gi|119372972|gb|ABL68565.1| conserved hypothetical protein [Paracoccus denitrificans PD1222]
Length = 183
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 6/135 (4%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
PY A+AN +D+ + I +L +Q+ +Y H + + K+ ++ +AW+ GPV
Sbjct: 4 PYDPRAIANLMLDEADRRGWKITNLALQKLLYFAHGIHLTKTKRPLVSGYFEAWQYGPVH 63
Query: 72 VGVYHRFKYFDSHPI------EVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQ 125
VY FK S PI + + R PK + E+ +++ + Y +L
Sbjct: 64 PAVYRAFKPSGSAPIINRAAAKDPLTGKTRDLPKPTDLEVIDLVSDVMRSYGHLPPGRLV 123
Query: 126 EIVQEENKTWRRLYD 140
++ ++ W + D
Sbjct: 124 DLSHAKDSPWSVVVD 138
>gi|332686858|ref|YP_004456632.1| phage protein [Melissococcus plutonius ATCC 35311]
gi|332370867|dbj|BAK21823.1| phage protein [Melissococcus plutonius ATCC 35311]
Length = 199
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
PY I VA++ ID + I I++LK+Q+ +Y ++ +K + DE Q W+ GPV
Sbjct: 21 PYLAIYVADYIIDLCDQKGIEINNLKLQKIMYYLQARYLIDTEKPLFDENIQKWRYGPVI 80
Query: 72 VGVYHRFK 79
VYH +K
Sbjct: 81 PSVYHEYK 88
>gi|167461417|ref|ZP_02326506.1| putative phage-associated protein [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322383513|ref|ZP_08057287.1| hypothetical protein PL1_1439 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321152200|gb|EFX45032.1| hypothetical protein PL1_1439 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 249
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 16/125 (12%)
Query: 30 SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVI 89
++ + HLK+Q+ +Y + D +L K + E A++ GPV V+H++K S I+
Sbjct: 105 TVQVSHLKLQKLLYYVYADFLLATGKKLFKEPIVAFEYGPVVEEVFHKYKVHGSSEIDYK 164
Query: 90 MDLSFRI----------FPKIANQE-----IGEIMESIWNKYQSHSTEQLQEIVQEENKT 134
D F I F ++A+ E +G I++ + +KY+S+S +L + +
Sbjct: 165 EDEYFCIYTDEFAVTPSFMRVASSEHGIYAVGFILK-VLDKYESYSAGELVKKTHQVGGP 223
Query: 135 WRRLY 139
W+R+Y
Sbjct: 224 WKRVY 228
>gi|157311186|ref|YP_001469231.1| hypothetical protein P9_gp51 [Streptococcus phage P9]
gi|119104335|gb|ABL61080.1| hypothetical protein [Streptococcus phage P9]
Length = 173
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 15 TIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+ VAN+ I+ K PI++LK+Q+ +Y + +L+ + +E + WK GPV V
Sbjct: 3 ALFVANYIIEYSNKKGYPINNLKLQKLLYFVNVRNILENGAPLFEESMEKWKYGPVVPDV 62
Query: 75 YHRFKYFDSHPI---EVIMD 91
YH +K F + I E+IM+
Sbjct: 63 YHEYKRFGAFSISTDEMIME 82
>gi|326560181|gb|EGE10569.1| phage-associated protein [Moraxella catarrhalis 7169]
gi|326565730|gb|EGE15892.1| phage-associated protein [Moraxella catarrhalis BC1]
Length = 170
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
PY+ I VAN+ + + ++ P+ HLK+Q+ +Y + K ++ E W+ GPV
Sbjct: 5 PYNPIDVANYIVAEAIRREKPVTHLKLQKLLYYVVAKYLQTHNKPLIAENVVKWQYGPVV 64
Query: 72 VGVYHRFKYFDS 83
VYH+FK S
Sbjct: 65 KSVYHQFKILGS 76
>gi|153869326|ref|ZP_01998966.1| phage-associated protein [Beggiatoa sp. PS]
gi|152074156|gb|EDN71042.1| phage-associated protein [Beggiatoa sp. PS]
Length = 159
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 13/129 (10%)
Query: 13 YSTIAVANFF---IDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGP 69
Y +A++F ID+ +I HLK+Q+ +Y + K + DE+ +AW GP
Sbjct: 4 YQVNQIADWFLAAIDREAGDTIS--HLKLQKLMYYAQAWSLALNHKCLFDEDFEAWTHGP 61
Query: 70 VFVGVYHRFKYFD--SHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEI 127
V ++ RFK FD S P E I+ + + +E E++ I N Y S + L+E+
Sbjct: 62 VLPTLWQRFKEFDWNSIPPEAIISNTDGL-----TEEDEELLSDILNSYGDLSAKHLEEL 116
Query: 128 VQEENKTWR 136
E WR
Sbjct: 117 THSETP-WR 124
>gi|307947548|ref|ZP_07662879.1| cdse [Roseibium sp. TrichSKD4]
gi|307769254|gb|EFO28484.1| cdse [Roseibium sp. TrichSKD4]
Length = 169
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 14/134 (10%)
Query: 13 YSTIAVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
Y VAN F+ + + I +D LK+Q+ +Y H + + + E +AW GPV
Sbjct: 11 YKPSWVANTFLVRAREDRISDVDPLKLQKLMYCLHGWNLAVRGHPAVGERFEAWPHGPVL 70
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIA----------NQEIGEIMESIWNKYQSHST 121
+YH+FK + I L+ I P ++ E+ + +W++Y+ S
Sbjct: 71 SSIYHQFKSYGGFRIH---GLAEEIDPTTGEKATLIVAKSDENFYEVFDRVWDRYKKFSG 127
Query: 122 EQLQEIVQEENKTW 135
+L E+ + N W
Sbjct: 128 LKLSEMTHQPNTPW 141
>gi|225869434|ref|YP_002745382.1| hypothetical protein SZO_18870 [Streptococcus equi subsp.
zooepidemicus]
gi|225871436|ref|YP_002747383.1| hypothetical protein SEQ_2178 [Streptococcus equi subsp. equi 4047]
gi|225700840|emb|CAW95560.1| hypothetical protein SEQ_2178 [Streptococcus equi subsp. equi 4047]
gi|225702710|emb|CAX00835.1| hypothetical protein SZO_18870 [Streptococcus equi subsp.
zooepidemicus]
Length = 249
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 17/147 (11%)
Query: 8 QTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQ 67
Q++ S I VA FF+ P+ HL++Q+ +YL + +L +S+ DE+ A++
Sbjct: 87 QSDSKISAIDVAKFFLAMR-----PLSHLQLQKLVYLAYKTYLLAYGESLFDEKIVAFQY 141
Query: 68 GPVFVGVYHRFKYF-------DSHPIEVIMDLSF-----RIFPKIANQEIGEIMESIWNK 115
GPV VYH FK + D H ++ D+ R+ ++I ++ + +
Sbjct: 142 GPVVEEVYHSFKKYGSEVIDIDDHTEYILKDIHLPQALGRMLLVEDAKKIVPVLLDVVKQ 201
Query: 116 YQSHSTEQLQEIVQEENKTWRRLYDPN 142
Y + +L ++ E W+ ++ P
Sbjct: 202 YGDLTGGELVKLTHSEKGPWQTVFRPQ 228
>gi|16271827|ref|NP_438164.1| hypothetical protein phiNIH1.1_51 [Temperate phage phiNIH1.1]
gi|19746216|ref|NP_607352.1| hypothetical protein spyM18_1241 [Streptococcus pyogenes MGAS8232]
gi|21910743|ref|NP_665011.1| hypothetical protein SpyM3_1207 [Streptococcus pyogenes MGAS315]
gi|28876321|ref|NP_795600.1| hypothetical protein SpyM3_1207 [Streptococcus pyogenes phage
315.4]
gi|28895567|ref|NP_801917.1| hypothetical protein SPs0655 [Streptococcus pyogenes SSI-1]
gi|71903887|ref|YP_280690.1| phage protein [Streptococcus pyogenes MGAS6180]
gi|94990811|ref|YP_598911.1| phage protein [Streptococcus pyogenes MGAS10270]
gi|139473391|ref|YP_001128107.1| hypothetical protein SpyM50531 [Streptococcus pyogenes str.
Manfredo]
gi|16156219|gb|AAL15093.1| hypothetical protein-phage associated [temperate phage PhiNIH1.1]
gi|19748400|gb|AAL97851.1| hypothetical phage protein [Streptococcus pyogenes MGAS8232]
gi|21904947|gb|AAM79814.1| conserved hypothetical protein - phage-associated [Streptococcus
pyogenes MGAS315]
gi|28810816|dbj|BAC63750.1| hypothetical protein (phage associated) [Streptococcus pyogenes
SSI-1]
gi|71802982|gb|AAX72335.1| phage protein [Streptococcus pyogenes MGAS6180]
gi|94544319|gb|ABF34367.1| phage protein [Streptococcus pyogenes MGAS10270]
gi|134271638|emb|CAM29869.1| hypothetical phage protein [Streptococcus pyogenes str. Manfredo]
Length = 174
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 15 TIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+ VAN+ I+ K I++LK+Q+ +Y + +L+ + +E + WK GPV V
Sbjct: 3 ALFVANYIIEYSNKKGYKINNLKLQKLLYFVNVRNILENGAPLFEESMEKWKYGPVVPDV 62
Query: 75 YHRFKYFDSHPI---EVIMD-LSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEI 127
YH +K F + I E+IM+ + F + P GE+ + +Y S E Q I
Sbjct: 63 YHEYKRFGAFSISTDEMIMEYVEFSVSP------FGELSDLEITEYDSQKVENTQLI 113
>gi|254712605|ref|ZP_05174416.1| hypothetical protein BcetM6_04357 [Brucella ceti M644/93/1]
gi|254715677|ref|ZP_05177488.1| hypothetical protein BcetM_04377 [Brucella ceti M13/05/1]
gi|261217425|ref|ZP_05931706.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261320299|ref|ZP_05959496.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|260922514|gb|EEX89082.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261292989|gb|EEX96485.1| conserved hypothetical protein [Brucella ceti M644/93/1]
Length = 185
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%)
Query: 9 TNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQG 68
+ PY A+AN +D+ + I + +L +Q+ +Y H +++ K ++ +AW+ G
Sbjct: 4 SGGPYDPRAIANLMLDEADRSGIQVTNLALQKLLYFAHSIFLIETKHPLVSGYFEAWQYG 63
Query: 69 PVFVGVYHRFKYFDSHPIE 87
PV Y FK S+PI+
Sbjct: 64 PVHPAAYSAFKTAGSYPID 82
>gi|209559953|ref|YP_002286425.1| phage-associated protein [Streptococcus pyogenes NZ131]
gi|209541154|gb|ACI61730.1| Uncharacterized phage-associated protein [Streptococcus pyogenes
NZ131]
Length = 174
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 15 TIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+ VAN+ I+ K I++LK+Q+ +Y + +L+ + +E + WK GPV V
Sbjct: 3 ALFVANYIIEYSNKKGYKINNLKLQKLLYFVNVRNILENGTPLFEESMEKWKYGPVVPDV 62
Query: 75 YHRFKYFDSHPI---EVIMD-LSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEI 127
YH +K F + I E+IM+ + F + P GE+ + +Y S E Q I
Sbjct: 63 YHEYKRFGAFSISTDEMIMEYVEFSVSP------FGELSDLEITEYDSQKVENTQLI 113
>gi|62317337|ref|YP_223190.1| hypothetical protein BruAb2_0400 [Brucella abortus bv. 1 str.
9-941]
gi|225629298|ref|ZP_03787331.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|237816891|ref|ZP_04595883.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254690835|ref|ZP_05154089.1| hypothetical protein Babob68_11893 [Brucella abortus bv. 6 str.
870]
gi|254695855|ref|ZP_05157683.1| hypothetical protein Babob3T_14760 [Brucella abortus bv. 3 str.
Tulya]
gi|254698617|ref|ZP_05160445.1| hypothetical protein Babob28_13199 [Brucella abortus bv. 2 str.
86/8/59]
gi|254700044|ref|ZP_05161872.1| hypothetical protein Bsuib55_04177 [Brucella suis bv. 5 str. 513]
gi|254703164|ref|ZP_05164992.1| hypothetical protein Bsuib36_04362 [Brucella suis bv. 3 str. 686]
gi|254705690|ref|ZP_05167518.1| hypothetical protein BpinM_01443 [Brucella pinnipedialis
M163/99/10]
gi|254710922|ref|ZP_05172733.1| hypothetical protein BpinB_11810 [Brucella pinnipedialis B2/94]
gi|254732064|ref|ZP_05190642.1| hypothetical protein Babob42_12999 [Brucella abortus bv. 4 str.
292]
gi|256015595|ref|YP_003105604.1| putative phage-associated protein [Brucella microti CCM 4915]
gi|256029304|ref|ZP_05442918.1| hypothetical protein BpinM2_01368 [Brucella pinnipedialis
M292/94/1]
gi|256043706|ref|ZP_05446629.1| hypothetical protein Bmelb1R_04397 [Brucella melitensis bv. 1
str. Rev.1]
gi|256058993|ref|ZP_05449204.1| hypothetical protein Bneo5_01358 [Brucella neotomae 5K33]
gi|256111251|ref|ZP_05452282.1| hypothetical protein Bmelb3E_01433 [Brucella melitensis bv. 3
str. Ether]
gi|256157499|ref|ZP_05455417.1| hypothetical protein BcetM4_01398 [Brucella ceti M490/95/1]
gi|256253523|ref|ZP_05459059.1| hypothetical protein BcetB_04342 [Brucella ceti B1/94]
gi|256256019|ref|ZP_05461555.1| hypothetical protein Babob9C_01348 [Brucella abortus bv. 9 str.
C68]
gi|256262266|ref|ZP_05464798.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260167604|ref|ZP_05754415.1| putative phage-associated protein [Brucella sp. F5/99]
gi|260544571|ref|ZP_05820392.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260564894|ref|ZP_05835379.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
16M]
gi|260567907|ref|ZP_05838376.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|260756415|ref|ZP_05868763.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260759847|ref|ZP_05872195.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260763086|ref|ZP_05875418.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260882237|ref|ZP_05893851.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261220653|ref|ZP_05934934.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261313110|ref|ZP_05952307.1| conserved hypothetical protein [Brucella pinnipedialis
M163/99/10]
gi|261318504|ref|ZP_05957701.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261322937|ref|ZP_05962134.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261750526|ref|ZP_05994235.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261753784|ref|ZP_05997493.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|261757026|ref|ZP_06000735.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265986303|ref|ZP_06098860.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265990127|ref|ZP_06102684.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265992763|ref|ZP_06105320.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|265995997|ref|ZP_06108554.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|62197530|gb|AAX75829.1| conserved hypothetical protein [Brucella abortus bv. 1 str.
9-941]
gi|225615794|gb|EEH12843.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|237787704|gb|EEP61920.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|255998255|gb|ACU49942.1| putative phage-associated protein [Brucella microti CCM 4915]
gi|260097842|gb|EEW81716.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260152537|gb|EEW87630.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
16M]
gi|260154572|gb|EEW89653.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|260670165|gb|EEX57105.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260673507|gb|EEX60328.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260676523|gb|EEX63344.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260871765|gb|EEX78834.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260919237|gb|EEX85890.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261297727|gb|EEY01224.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261298917|gb|EEY02414.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261302136|gb|EEY05633.1| conserved hypothetical protein [Brucella pinnipedialis
M163/99/10]
gi|261737010|gb|EEY25006.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|261740279|gb|EEY28205.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261743537|gb|EEY31463.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262550294|gb|EEZ06455.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|262763633|gb|EEZ09665.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263000796|gb|EEZ13486.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263091983|gb|EEZ16289.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|264658500|gb|EEZ28761.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 185
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%)
Query: 9 TNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQG 68
+ PY A+AN +D+ + I + +L +Q+ +Y H +++ K ++ +AW+ G
Sbjct: 4 SGGPYDPRAIANLMLDEADRSGIQVTNLALQKLLYFAHSIFLIETKHPLVSGYFEAWQYG 63
Query: 69 PVFVGVYHRFKYFDSHPIE 87
PV Y FK S+PI+
Sbjct: 64 PVHPAAYSAFKTAGSYPID 82
>gi|17988803|ref|NP_541436.1| hypothetical protein BMEII0458 [Brucella melitensis bv. 1 str.
16M]
gi|261216275|ref|ZP_05930556.1| conserved hypothetical protein [Brucella abortus bv. 3 str.
Tulya]
gi|297249377|ref|ZP_06933078.1| hypothetical protein BAYG_02125 [Brucella abortus bv. 5 str.
B3196]
gi|17984622|gb|AAL53700.1| hypothetical protein BMEII0458 [Brucella melitensis bv. 1 str.
16M]
gi|260917882|gb|EEX84743.1| conserved hypothetical protein [Brucella abortus bv. 3 str.
Tulya]
gi|297173246|gb|EFH32610.1| hypothetical protein BAYG_02125 [Brucella abortus bv. 5 str.
B3196]
Length = 183
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%)
Query: 9 TNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQG 68
+ PY A+AN +D+ + I + +L +Q+ +Y H +++ K ++ +AW+ G
Sbjct: 2 SGGPYDPRAIANLMLDEADRSGIQVTNLALQKLLYFAHSIFLIETKHPLVSGYFEAWQYG 61
Query: 69 PVFVGVYHRFKYFDSHPIE 87
PV Y FK S+PI+
Sbjct: 62 PVHPAAYSAFKTAGSYPID 80
>gi|326570377|gb|EGE20417.1| phage-associated protein [Moraxella catarrhalis BC8]
Length = 167
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
PY+ I VAN+ + + +K P+ HLK+Q+ +Y +++E+ W+ GPV
Sbjct: 5 PYNPIDVANYIVAEAIKREKPVTHLKLQKLLYYVVAKYAKTYNTILINEDIVKWQYGPVV 64
Query: 72 VGVYHRFK 79
VYH FK
Sbjct: 65 KSVYHYFK 72
>gi|326559800|gb|EGE10206.1| phage-associated protein [Moraxella catarrhalis 46P47B1]
Length = 239
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
PY+ I VAN+ + + VK P+ HLK+Q+ +Y +++E+ W+ GPV
Sbjct: 77 PYNPIDVANYIVAEAVKREKPVTHLKLQKLLYYVVAKYAKTYNTILINEDIVKWQYGPVV 136
Query: 72 VGVYHRFK 79
VYH FK
Sbjct: 137 KSVYHYFK 144
>gi|229111150|ref|ZP_04240707.1| hypothetical protein bcere0018_33970 [Bacillus cereus Rock1-15]
gi|228672314|gb|EEL27601.1| hypothetical protein bcere0018_33970 [Bacillus cereus Rock1-15]
Length = 155
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 33 IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDL 92
I +LK+Q+ +Y + K+K++ +E+ +AW GPV VY FK + + I+ I D
Sbjct: 23 ITNLKLQKLLYYAQGFCLAIKEKALFEEDIEAWVHGPVVPEVYSEFKGYTYNDIDGIYDE 82
Query: 93 SFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
+ + K +EI ++++++W +QS+S + L+E+ E
Sbjct: 83 NKIVLTK---EEI-DLLDNMWKIFQSYSGKVLEEMTHNE 117
>gi|326565556|gb|EGE15722.1| phage-associated protein [Moraxella catarrhalis 103P14B1]
gi|326573356|gb|EGE23324.1| phage-associated protein [Moraxella catarrhalis 101P30B1]
Length = 217
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%)
Query: 3 KRTFTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEP 62
K+ PY+ + VAN+ + + +K P+ HLK+Q+ +Y +++E+
Sbjct: 46 KKGVVMIKAPYNPMDVANYIVAEAIKREKPVTHLKLQKLLYYVVAKYAKTYNTILINEDI 105
Query: 63 QAWKQGPVFVGVYHRFK 79
W+ GPV VYH FK
Sbjct: 106 VKWQYGPVVKSVYHYFK 122
>gi|149204320|ref|ZP_01881287.1| hypothetical protein RTM1035_18245 [Roseovarius sp. TM1035]
gi|149142205|gb|EDM30252.1| hypothetical protein RTM1035_18245 [Roseovarius sp. TM1035]
Length = 182
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 6/134 (4%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
Y +AN +D+ K I +L +Q+ +Y H + + K+ ++ +AW+ GPV
Sbjct: 4 YDPRTIANLMLDEADKRGWKITNLALQKLLYFAHGIHLTRNKRPLVSGYFEAWQYGPVHP 63
Query: 73 GVYHRFKYFDSHPI------EVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQE 126
VY FK + PI + + R PK + EI +++ + Y +L +
Sbjct: 64 AVYRAFKPSGAAPIVNRAVAKDPLTCKTRELPKPTDVEIIDLVSDVMRSYGHLPPGRLVD 123
Query: 127 IVQEENKTWRRLYD 140
+ ++ W + D
Sbjct: 124 LSHAKDSPWSVIVD 137
>gi|38234221|ref|NP_939988.1| hypothetical protein DIP1646 [Corynebacterium diphtheriae NCTC
13129]
gi|38200483|emb|CAE50176.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
Length = 159
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 56/135 (41%), Gaps = 3/135 (2%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
Y +AN +++ I +K+Q+ +Y + KS+ E + W+ GPV
Sbjct: 3 YVPTLIANNVLNRAFAEKYRISPMKLQKILYFAAAEYQKNTGKSLFSERFETWQYGPVLR 62
Query: 73 GVYHRFKYFDSHPIEVI---MDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
VY F+ F I + + + A+ + +++++W+ + HS L I
Sbjct: 63 SVYSEFRPFSRDFITRFAKDAENQSHMINESADPALQRVLDTVWSATKGHSAVDLSRITH 122
Query: 130 EENKTWRRLYDPNDP 144
EN W + + P
Sbjct: 123 MENSAWDKSFQNEQP 137
>gi|153810977|ref|ZP_01963645.1| hypothetical protein RUMOBE_01368 [Ruminococcus obeum ATCC 29174]
gi|149832865|gb|EDM87948.1| hypothetical protein RUMOBE_01368 [Ruminococcus obeum ATCC 29174]
Length = 152
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+ + VAN +++G I I +K+Q+ +YL + K + + + WK GPV
Sbjct: 3 TALNVANNVLERGFSEDIDITPMKLQKLVYLIYKKYYQDTDKILFQDRFEVWKYGPVVRS 62
Query: 74 VYHRFKYFDSHPIEVI---MDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
+Y FK F + I+ + S I + + E + +IW+KY+ + L + +
Sbjct: 63 IYDEFKEFGGNAIKRYSKEKNGSVLIVNEKKAADFRECINAIWDKYKLYDGIPLSAMTHK 122
Query: 131 ENKTWRRLYDPNDP 144
+ W + +P
Sbjct: 123 KGTAWYKAAKRQEP 136
>gi|187736496|ref|YP_001878608.1| Uncharacterized phage-associated protein-like protein [Akkermansia
muciniphila ATCC BAA-835]
gi|187426548|gb|ACD05827.1| Uncharacterized phage-associated protein-like protein [Akkermansia
muciniphila ATCC BAA-835]
Length = 161
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 2/142 (1%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+T + N+FI + + + +K+ + L + + +++E +AW GPV
Sbjct: 13 TTQKLCNWFIQQANAKELILTPVKLNHLVILADWWHLHRTGAFLINERVEAWPSGPVLPS 72
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
+YH +K D P I S R P +I +E IWN Y ++ +QL I +
Sbjct: 73 IYHEYK--DQPPYSSIEHPSRRQPPLEEETDIIPFLEHIWNVYGKYTAQQLGRINTAPSS 130
Query: 134 TWRRLYDPNDPNTNRTITVEEI 155
W++ ++ + IT E +
Sbjct: 131 PWKQSQGKHEQAHRQQITEEHV 152
>gi|217977601|ref|YP_002361748.1| hypothetical protein Msil_1421 [Methylocella silvestris BL2]
gi|217502977|gb|ACK50386.1| conserved hypothetical protein [Methylocella silvestris BL2]
Length = 188
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 11 PPYSTIAVANFFIDKGVK---YSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQ 67
PPY AVAN ++ K +PI +L +Q+ +Y H +++ ++ +AWK
Sbjct: 4 PPYDPRAVANLLLELAAKEEEGPMPISNLALQKLLYFAHGHFLIRTGVPLVQGAFEAWKY 63
Query: 68 GPVFVGVYHRFKYFDSHPIE 87
GPV VY FK PI
Sbjct: 64 GPVHPAVYQAFKGEADQPIR 83
>gi|291529520|emb|CBK95106.1| Uncharacterized phage-associated protein [Eubacterium rectale
M104/1]
Length = 144
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
Y + ++ + I+K V +IPI ++++Q+ +Y + + KK M +E +AW GPV
Sbjct: 2 YKALDISKYIINKCVNDNIPISNMQLQKILYCIQRECLQLYKKEMFVDEIEAWPFGPVIP 61
Query: 73 GVYHRFKYFDSHPIEV 88
VY+ + F ++PI +
Sbjct: 62 EVYYMYCGFGANPIRI 77
>gi|197294690|ref|YP_001799231.1| phage-associated protein [Candidatus Phytoplasma australiense]
gi|171854017|emb|CAM11984.1| Uncharacterized phage-associated protein [Candidatus Phytoplasma
australiense]
Length = 156
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 4/142 (2%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR 77
VAN+ I + I ++KI + +Y + Q K++ E+ +AW GPV + +Y
Sbjct: 12 VANYLISQTDTNKYKISNMKINKLLYYIQGHYIAQTGKTLFPEKIEAWLFGPVILNIYSE 71
Query: 78 FKYFDSHPIEVIMDLSFRIFPKIA-NQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWR 136
F F +PI D + K E +I++ + NKY S +L EE W+
Sbjct: 72 FFNFVDNPIP--NDYVCKGASKNELTTEAKKIIDKVINKYSPFSARELSVKTHEE-LPWK 128
Query: 137 RLYDPNDPNTNRTITVEEITKM 158
Y+P N IT + + K
Sbjct: 129 EAYNPRKKWQNNIITHQLLEKF 150
>gi|281357129|ref|ZP_06243618.1| phage-associated protein [Victivallis vadensis ATCC BAA-548]
gi|281316160|gb|EFB00185.1| phage-associated protein [Victivallis vadensis ATCC BAA-548]
Length = 157
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 68/145 (46%), Gaps = 15/145 (10%)
Query: 16 IAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVY 75
+ +A++ I+K + I +LK+Q+ +Y ++ + DE+ QAW GPV +Y
Sbjct: 9 LTIASYLIEKSITSGDCITNLKLQKLVYYAQAWFIVLFGIKLFDEDIQAWVHGPVVRSIY 68
Query: 76 HRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEI---MESIWNKYQSHSTEQLQEIVQEEN 132
+K + P+ P++ + G++ ++ I + +S QL E++ +
Sbjct: 69 DCYKQYGYKPLPC---------PRVKSDLPGDVQKHLDEILKIFGGYSGFQL-ELMTHQE 118
Query: 133 KTWR--RLYDPNDPNTNRTITVEEI 155
W+ R P D +R I+ E++
Sbjct: 119 APWKNARKGLPPDMACDRVISPEDM 143
>gi|317479190|ref|ZP_07938326.1| hypothetical protein HMPREF1007_01442 [Bacteroides sp. 4_1_36]
gi|316904634|gb|EFV26452.1| hypothetical protein HMPREF1007_01442 [Bacteroides sp. 4_1_36]
Length = 151
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
YS + +A++F+ + +K IPI ++ + + IY H K K ++D+ AW GPV
Sbjct: 2 YSGLVIADYFVRECLKKRIPITNMSVLKMIYFAHGFYYALKGKKLVDDPFYAWPWGPVEK 61
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKI-ANQEIGEIM 109
Y FK + S PI D + + K+ A++++ +
Sbjct: 62 KTYDCFKKYVSSPIIATSDTTDKELAKLDADKDLTSFL 99
>gi|258516059|ref|YP_003192281.1| phage-associated protein [Desulfotomaculum acetoxidans DSM 771]
gi|257779764|gb|ACV63658.1| Putative phage-associated protein [Desulfotomaculum acetoxidans DSM
771]
Length = 339
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 14 STIAVANFFIDKGV-KYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+T+ V+ FFI K + I HLK+Q+ +Y + + E+ +AW GPVF
Sbjct: 170 NTLNVSKFFITKIYPEAGEVITHLKLQKMVYYVQSWYLAFFQSPFFHEDCEAWVHGPVFP 229
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
G+Y +K F + PI + + IF N + I+ +W Y + + L+++ E
Sbjct: 230 GLYDIYKDFGNKPITKLTRFNENIF----NNDQKFILNMVWQVYGKYDAKYLEKLTHIE- 284
Query: 133 KTWRRLYDP--NDPNTNRTITVEEI 155
W+++ + D ++ I E+I
Sbjct: 285 YPWKKVRESYKKDERSSEVIVKEDI 309
>gi|288958028|ref|YP_003448369.1| hypothetical protein AZL_011870 [Azospirillum sp. B510]
gi|288910336|dbj|BAI71825.1| hypothetical protein AZL_011870 [Azospirillum sp. B510]
Length = 172
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 17 AVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYH 76
AVANF +D + +L +Q+ +Y H ++ + ++ + +AW+ GPV +Y
Sbjct: 13 AVANFVLDFCEARGRKVTNLALQKIVYFCHVWSLIMLDRPLVKHQFEAWQYGPVLQYLYR 72
Query: 77 RFKYFDSHPIE 87
+FK FD PIE
Sbjct: 73 QFKAFDRRPIE 83
>gi|239502391|ref|ZP_04661701.1| phage-associated protein [Acinetobacter baumannii AB900]
Length = 149
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 10/143 (6%)
Query: 15 TIAVANF--FIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+ VAN+ +++ + S I LK+Q+ +Y + K + E +AW GPV
Sbjct: 5 ALDVANYILWLENRFEGSEGITPLKLQKLVYYCQGFHLAMFDKELFPESIEAWLHGPVVP 64
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
VYH FK + + D + I + + + E++ES Y S +L+ + EE
Sbjct: 65 SVYHHFKAAGNDIVTPPKDFNIEILSEAQRELLDEVIES----YGQFSAWRLRNMTHEE- 119
Query: 133 KTWRRLYDPNDPNTNRTITVEEI 155
W+ Y +P N I+++++
Sbjct: 120 APWKNAY---EPGCNNEISIKDM 139
>gi|15838393|ref|NP_299081.1| hypothetical protein XF1793 [Xylella fastidiosa 9a5c]
gi|9106870|gb|AAF84601.1|AE004001_6 hypothetical protein XF_1793 [Xylella fastidiosa 9a5c]
Length = 102
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
PYS +AN F+ K + + L++ + +YL H + ++ ++DE +AW+ GPV
Sbjct: 2 PYSPTIIANAFLQKAPQEGRALTPLQVLKLVYLAHGWCLGVHRQPLIDEPVEAWRAGPVI 61
Query: 72 VGVYHRFKYFDSHPIEVIMDLSF 94
+Y+ K + S I ++ + +
Sbjct: 62 RSLYNAIKQYGSSGITKLLPVRW 84
>gi|238764937|ref|ZP_04625876.1| hypothetical protein ykris0001_360 [Yersinia kristensenii ATCC
33638]
gi|238696878|gb|EEP89656.1| hypothetical protein ykris0001_360 [Yersinia kristensenii ATCC
33638]
Length = 156
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 13 YSTIAVANFFIDKGVKYSIP-IDHLKIQQFIYLTHC-DVVLQKKKSMLDEEPQAWKQGPV 70
YS +AVAN FI+K +K + + +K+Q+ ++ T + L+ + D+ WK GPV
Sbjct: 3 YSAVAVANAFIEKALKGELKELTPMKLQKLLFYTQSWHLKLRGGTPLFDDLFARWKFGPV 62
Query: 71 FVGVYHRFKYFDSHPIEVIM------DLSF-RIFPKIA--NQEIGEIMESIWNKYQSHST 121
+Y K + ++ I+ + D F RI P I ++E ++++ I Y +S
Sbjct: 63 IPTLYRLLKKYGANEIDSKISFIQESDGDFERITPSIQKDDEETRKLVDKIIEVYGEYSG 122
Query: 122 EQLQEIVQEENKTWRRLYDPNDPNTNRTIT 151
+L + N W + P +++ +
Sbjct: 123 PELSSMTHAPNTAWSKGATDGGPISHKDMA 152
>gi|331092230|ref|ZP_08341058.1| hypothetical protein HMPREF9477_01701 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330401662|gb|EGG81241.1| hypothetical protein HMPREF9477_01701 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 145
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
YS + +A + + K PI +L++Q+ +Y + + + DEE AW+ GPV
Sbjct: 3 YSALNIAKYVVTFCFKRGNPISNLQLQKILYYIQGYSLALRDEEAFDEEIVAWQYGPVIK 62
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESI 112
VY F + + PIE SFRI +I +QE +++ I
Sbjct: 63 AVYDFFSIYAAMPIEN----SFRI--EIEDQEFEKMIRVI 96
>gi|229070620|ref|ZP_04203858.1| Prophage ps3 protein 01 [Bacillus cereus F65185]
gi|228712525|gb|EEL64462.1| Prophage ps3 protein 01 [Bacillus cereus F65185]
Length = 352
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 17 AVANFFIDKGVKYS------IPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV 70
+V FFI KG +++ + + LK+Q+ +Y + ++ QAW+ GPV
Sbjct: 192 SVEKFFIIKGQEFNEKDEDDLRVSPLKLQKLMYFAQGWSHAFTGHDLFEDNFQAWQHGPV 251
Query: 71 FVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
+YHR+K + S I+ ++S ++Q I+ IW+KY + L+++
Sbjct: 252 IPDLYHRYKSYGSKRIDKDFNVSIHDLGLTSDQ--LSILHWIWDKYSKFEAKFLEDLTHM 309
Query: 131 ENKTWRR 137
E WR+
Sbjct: 310 EY-PWRK 315
>gi|168206179|ref|ZP_02632184.1| prophage ps3 protein 01 [Clostridium perfringens E str. JGS1987]
gi|170662328|gb|EDT15011.1| prophage ps3 protein 01 [Clostridium perfringens E str. JGS1987]
Length = 141
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
Y+ +A + +D ++ P+ +LK+Q+ +Y +++K + +EE + W+ GPV
Sbjct: 3 YNVKDIAAYIVDYSIENGCPVSNLKLQKILYYVQAYFLIKKNEPCFEEEIECWRHGPVVR 62
Query: 73 GVYHRF-KYFDSH 84
VY + KYF+ +
Sbjct: 63 EVYSEYKKYFNDN 75
>gi|315575459|gb|EFU87650.1| conserved hypothetical protein [Enterococcus faecalis TX0309B]
gi|315580100|gb|EFU92291.1| conserved hypothetical protein [Enterococcus faecalis TX0309A]
Length = 254
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 28/167 (16%)
Query: 8 QTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQ 67
+++ + +A FF+ G + +LK+Q+ IY ++ +++ K + DE A+K
Sbjct: 89 ESDKKIDVMDIAKFFLSFG-----SLTNLKLQKLIYFSYATHLVRTGKKLFDEPIVAFKY 143
Query: 68 GPVFVGVYHRFKYFDSHPIEV--------IMDLSFRI-FPKIANQE--------IGEIME 110
GPV VYH +K F I + I + S + KIA E + E++E
Sbjct: 144 GPVVKDVYHIYKDFGRESINIEDDGPKFHISEFSIPVSLAKIALNESSSEILLTLTEVIE 203
Query: 111 SIWNKYQSHSTEQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITK 157
S W+K + +L I W Y D + IT E I K
Sbjct: 204 SYWDK----TASKLVNISHVAGGPWDHAY--KDGKHDVIITDELIKK 244
>gi|228982581|ref|ZP_04142840.1| Uncharacterized phage-associated protein [Bacillus thuringiensis
Bt407]
gi|228776764|gb|EEM25072.1| Uncharacterized phage-associated protein [Bacillus thuringiensis
Bt407]
Length = 156
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 66/127 (51%), Gaps = 15/127 (11%)
Query: 16 IAVANFFIDKGV---KYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+ +A +FI KG KY + + K+ + +Y + + + K + EE ++ GP+
Sbjct: 9 LEIAKYFIFKGKNSEKYRVT--NTKLHKLLYFSQGFHLAIENKPIFLEEIYMFEHGPLIK 66
Query: 73 GVYHRFKYFDSH--PIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
V+ +++ + H P E D SF NQE E ++ IWN ++ ++++ L+EI+
Sbjct: 67 SVHEKYRKYTYHTIPEECNDDFSF-------NQETREFLDDIWNLFKLYTSKVLEEIIT- 118
Query: 131 ENKTWRR 137
++ W+R
Sbjct: 119 NDEPWKR 125
>gi|146298679|ref|YP_001193270.1| phage-associated protein [Flavobacterium johnsoniae UW101]
gi|146153097|gb|ABQ03951.1| Uncharacterized phage-associated protein [Flavobacterium johnsoniae
UW101]
Length = 209
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 33 IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDL 92
I +LK+Q+ +Y + K + D+ +AW+ GPV +Y FK F S I + ++
Sbjct: 81 ISNLKLQKLLYYMQGYYIAIFNKKLFDDVIEAWQYGPVVPTMYMHFKEFGSSAITISDEI 140
Query: 93 SFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPN 142
I ++ E + ++ +Y +S L + +E K WR++++ N
Sbjct: 141 KENII-RLNTDEEENLFNDVFEQYNQYSAIALMNMTHDE-KPWRQIFNAN 188
>gi|185178710|ref|ZP_02554581.2| conserved hypothetical protein [Ureaplasma urealyticum serovar 5
str. ATCC 27817]
gi|188024436|ref|ZP_02570664.2| conserved hypothetical protein [Ureaplasma urealyticum serovar 7
str. ATCC 27819]
gi|225551416|ref|ZP_03772362.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 8
str. ATCC 27618]
gi|184209305|gb|EDU06348.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 5
str. ATCC 27817]
gi|188018729|gb|EDU56769.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 7
str. ATCC 27819]
gi|225379231|gb|EEH01596.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 8
str. ATCC 27618]
Length = 157
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 77/152 (50%), Gaps = 20/152 (13%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHC-------DVVLQKKKSMLDEEPQAWK 66
+ + VAN+F+ K S+ + K+Q+ +Y + + V K + DE+ +AW
Sbjct: 5 TPLIVANWFLTKE---SMTLK--KVQKLVYYAYSWYLTLMNEKVDDLKNKLFDEKIKAWV 59
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQE 126
GP +Y+ FK + + I I D + + + N + +I+ +W++Y +S QL+
Sbjct: 60 HGPAIPMLYNEFKEYKYNSIPKINDFNEQEY---FNLDTIDILNQVWDEYGHYSANQLES 116
Query: 127 IVQEENKTW---RRLYDPNDPNTNRTITVEEI 155
I +E+ W R+ ++P D + N I+ +EI
Sbjct: 117 ITHQED-PWIKARKGFEPLD-SCNAVISDKEI 146
>gi|253990607|ref|YP_003041963.1| hypothetical protein PAU_03133 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782057|emb|CAQ85221.1| Hypothetical Protein PAU_03133 [Photorhabdus asymbiotica]
Length = 155
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 13 YSTIAVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
Y TIAVAN FI+K ++ IP + +K+Q+ ++ + ++D+ W+ GPV
Sbjct: 3 YPTIAVANAFINKAIQGQIPDLTPMKLQKLMFYAQSWHLKIHNDPLVDDFFAKWQYGPVI 62
Query: 72 VGVYHRFKYFDSHPI 86
+YH K + ++PI
Sbjct: 63 PSLYHEVKRYGANPI 77
>gi|171920265|ref|ZP_02690891.2| conserved hypothetical protein [Ureaplasma parvum serovar 1 str.
ATCC 27813]
gi|171902669|gb|EDT48958.1| conserved hypothetical protein [Ureaplasma parvum serovar 1 str.
ATCC 27813]
Length = 157
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 20/152 (13%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHC-------DVVLQKKKSMLDEEPQAWK 66
+ + VAN+F+ K + K+Q+ +Y + + V K + DE+ +AW
Sbjct: 5 TPLIVANWFLTKE-----SMTPKKVQKLVYYAYSWYLTLMNEKVDDLKNKLFDEKIKAWV 59
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQE 126
GP +Y+ FK + + I I D + + + N + +I+ +W++Y +S QL+
Sbjct: 60 HGPAIPMLYNEFKEYKYNSIPKINDFNEQEY---FNLDTIDILNQVWDEYGHYSANQLES 116
Query: 127 IVQEENKTW---RRLYDPNDPNTNRTITVEEI 155
I +E+ W R+ ++P D + N I+ +EI
Sbjct: 117 ITHQED-LWIKARKGFEPLD-SCNAVISDKEI 146
>gi|19551563|ref|NP_599565.1| uncharacterized phage-associated protein [Corynebacterium
glutamicum ATCC 13032]
gi|62389211|ref|YP_224613.1| phage-associated protein [Corynebacterium glutamicum ATCC 13032]
gi|21323078|dbj|BAB97707.1| Uncharacterized phage-associated protein [Corynebacterium
glutamicum ATCC 13032]
gi|41324544|emb|CAF18884.1| putative phage-associated protein [Corynebacterium glutamicum ATCC
13032]
Length = 148
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 60/123 (48%), Gaps = 9/123 (7%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
S +A +F+ G + + LK+Q+ +Y + + + + + ++ AW+ GPV G
Sbjct: 5 SAREIAEWFVAWGDELDAEVSPLKLQKLLYYSQGEHIAATGRKLFSDKILAWQHGPVTPG 64
Query: 74 VYHRFKYFDSHPIE----VIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
VY K + +PI+ V + ++ + ++++ + ++W KY +S L+E
Sbjct: 65 VYSDTKSYGRNPIDPDEFVSDEFNWDDYSDVSDELV-----TVWRKYGIYSAWALREKTH 119
Query: 130 EEN 132
E+
Sbjct: 120 SES 122
>gi|197294475|ref|YP_001799016.1| phage-associated protein [Candidatus Phytoplasma australiense]
gi|197294810|ref|YP_001799351.1| phage-associated protein [Candidatus Phytoplasma australiense]
gi|171853802|emb|CAM11738.1| Uncharacterized phage-associated protein [Candidatus Phytoplasma
australiense]
gi|171854137|emb|CAM12128.1| Uncharacterized phage-associated protein [Candidatus Phytoplasma
australiense]
Length = 185
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+ VAN+ I K + + H+K+ + IY ++ +++ KK ++ E P+AWK GP+F
Sbjct: 11 NVFDVANYIIIKFKNNNQNLTHMKLHKLIYFSYVKYLIEYKKRLILEHPKAWKYGPIFGE 70
Query: 74 VYHRFKYFDSHPI 86
+Y K + PI
Sbjct: 71 LYVVLKDYFEKPI 83
>gi|254424290|ref|ZP_05038008.1| hypothetical protein S7335_4449 [Synechococcus sp. PCC 7335]
gi|196191779|gb|EDX86743.1| hypothetical protein S7335_4449 [Synechococcus sp. PCC 7335]
Length = 148
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 8/141 (5%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
S +A++FI + I +LK+Q+ +Y + + E+ QAW GPV
Sbjct: 2 SCFDIADYFIWLANETGSFISNLKLQKLVYYAQAWHIALYDDPLFAEDFQAWVHGPVIPS 61
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
+Y ++K F PI D PK+ +++ + ++ + +Y + +L+++ E
Sbjct: 62 LYQKYKTFGWQPILEDAD------PKLP-EDVFQFLDEVAEEYFACDAYELEQMTHAEAP 114
Query: 134 -TWRRLYDPNDPNTNRTITVE 153
W R P+D ++N I E
Sbjct: 115 WDWARGDLPSDASSNEVIKKE 135
>gi|85715204|ref|ZP_01046188.1| Uncharacterized phage-associated protein [Nitrobacter sp. Nb-311A]
gi|85698119|gb|EAQ35992.1| Uncharacterized phage-associated protein [Nitrobacter sp. Nb-311A]
Length = 171
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 18 VANFFIDKGVKYS-IPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYH 76
+A +FI++ + + + HLK+Q+ IY + + K + E+ +AW GPV V+H
Sbjct: 25 IAKWFINRADREAGDDMTHLKLQKLIYFSQAWHLANFNKPLFQEDIEAWAHGPVVPSVWH 84
Query: 77 RFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWR 136
++K + I I D F + +A ++ I+ +Y S + L+ + E+ WR
Sbjct: 85 QYKEYRWGSIPPITD-DFDVDANVAG-----YLDKIYARYGELSGKALERLTH-EHAPWR 137
Query: 137 RLYDPNDPNTNRTITV 152
P T T+
Sbjct: 138 ETRGDLPPEAKCTDTI 153
>gi|171920661|ref|ZP_02695533.2| conserved hypothetical protein [Ureaplasma urealyticum serovar 13
str. ATCC 33698]
gi|188524188|ref|ZP_02557555.2| conserved hypothetical protein [Ureaplasma urealyticum serovar 12
str. ATCC 33696]
gi|198273404|ref|ZP_03205940.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 4
str. ATCC 27816]
gi|171903394|gb|EDT49683.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 13
str. ATCC 33698]
gi|195660086|gb|EDX53466.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 12
str. ATCC 33696]
gi|198249924|gb|EDY74704.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 4
str. ATCC 27816]
Length = 157
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 20/152 (13%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHC-------DVVLQKKKSMLDEEPQAWK 66
+ + VAN+F+ K S+ + K+Q+ +Y + + V K + DE+ +AW
Sbjct: 5 TPLIVANWFL---TKESMTLK--KVQKLVYYAYSWYLILMNEKVDDLKNKLFDEKIKAWV 59
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQE 126
GP +Y+ FK + I I D + + + N + +I+ +W++Y +S QL+
Sbjct: 60 HGPAIPMLYNEFKKHKYNSIPKINDFNEQEY---FNLDTIDILNQVWDEYGHYSANQLES 116
Query: 127 IVQEENKTW---RRLYDPNDPNTNRTITVEEI 155
I +E+ W R+ + P D + N TI+ +EI
Sbjct: 117 ITHQED-PWIKARKGFGPLD-SCNETISDKEI 146
>gi|291520067|emb|CBK75288.1| Uncharacterized phage-associated protein [Butyrivibrio fibrisolvens
16/4]
Length = 140
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 69/147 (46%), Gaps = 8/147 (5%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
YS + ++ + + + +K PI +L +Q+ +Y D + +K + +AW+ GPV
Sbjct: 2 YSAVDLSKYVVSRCIKKENPISNLHLQKILYYIQKDFLCKKGDIAFPDTIEAWQFGPVVP 61
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
VY+ F + + PI D+S +++ I+++I ++ +L + N
Sbjct: 62 IVYYYFCAYGAMPITDYYDVSI-------DEDDSFIIDTIIDEKCIKDPWELVAETHKPN 114
Query: 133 KTWRRLYDPNDPNTNRTITVEEITKMA 159
W ++Y + N N I +E I ++
Sbjct: 115 GAWDQVYKNGNGNHN-PIPIELIKEVG 140
>gi|195867386|ref|ZP_03079390.1| cdse [Ureaplasma urealyticum serovar 9 str. ATCC 33175]
gi|195660862|gb|EDX54115.1| cdse [Ureaplasma urealyticum serovar 9 str. ATCC 33175]
Length = 157
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 20/152 (13%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHC-------DVVLQKKKSMLDEEPQAWK 66
+ + VAN+F+ K S+ + K+Q+ +Y + + V K + DE+ +AW
Sbjct: 5 TPLIVANWFL---TKESMTLK--KVQKLVYYAYSWYLILMNEKVDDLKNKLFDEKIKAWV 59
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQE 126
GP +Y+ FK + I I D + + + N + +I+ +W++Y +S QL+
Sbjct: 60 HGPAIPMLYNEFKEHKYNSIPKINDFNEQEY---FNLDTIDILNQVWDEYGHYSANQLES 116
Query: 127 IVQEENKTW---RRLYDPNDPNTNRTITVEEI 155
I +E+ W R+ + P D + N TI+ +EI
Sbjct: 117 ITHQED-PWIKARKGFGPLD-SCNETISDKEI 146
>gi|170782774|ref|YP_001711108.1| putative prophage protein [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157344|emb|CAQ02531.1| putative prophage protein [Clavibacter michiganensis subsp.
sepedonicus]
Length = 161
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 33 IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDL 92
+ +LK+Q+ +Y + + + +E QAW GPV VY ++K S+ I D
Sbjct: 34 LSNLKLQKLLYYAQGHHLARFGAPLFADEIQAWTHGPVVPVVYRQYKDHGSNAIPFTEDF 93
Query: 93 SFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
F + E +++ S+W + S S +L+E+ E
Sbjct: 94 DFF----QVDTETTDLLASVWETFGSKSAWKLREMTHSE 128
>gi|160915529|ref|ZP_02077740.1| hypothetical protein EUBDOL_01537 [Eubacterium dolichum DSM 3991]
gi|158432649|gb|EDP10938.1| hypothetical protein EUBDOL_01537 [Eubacterium dolichum DSM 3991]
Length = 182
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 15 TIAVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+ ANFFID I +L++ + +Y + ++ + D+E +AWK GPV
Sbjct: 4 AVDYANFFIDLANSSDDDYISNLRLNKLLYFAQGYSLYKRGMPLFDDEIEAWKYGPVVPS 63
Query: 74 VYHRFKYFDSHPI-EVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
VY FK I E D + F ++ E+ EI+ ++ ++ +S+ +L +I +
Sbjct: 64 VYRTFKVCGRGNIDETYGDYNVENF---SSDEL-EILLNVAEEFGKYSSPKLVDITHAQG 119
Query: 133 KTWRRLYD 140
W+++++
Sbjct: 120 SPWQQVFN 127
>gi|218507675|ref|ZP_03505553.1| hypothetical protein RetlB5_08707 [Rhizobium etli Brasil 5]
Length = 113
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
Y AVAN +D+ + I + H+ +Q+ +Y H +++ K ++ +AW+ GPV
Sbjct: 5 YDPRAVANLMLDEADRLDIGVSHIVLQKLLYFAHGIYLMRTKAPLVSGYFEAWQYGPVHP 64
Query: 73 GVYHRFK 79
Y FK
Sbjct: 65 AAYKSFK 71
>gi|239947434|ref|ZP_04699187.1| phage-associated protein [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921710|gb|EER21734.1| phage-associated protein [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 207
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 20/180 (11%)
Query: 14 STIAVANFF---IDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV 70
S VAN+F +D+ SI LK+Q+ IY + K++ +EE +AWK GPV
Sbjct: 11 SCFDVANYFLVLVDREAGDSIT--QLKLQKLIYFAQGIHLALFDKALFEEEIKAWKHGPV 68
Query: 71 FVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
+ F F + I + ++ F I+ ++ + ++ +++ Y +HS L+ +
Sbjct: 69 VPALRSIFGNFRDNVIPLPYEIDFAIYTELQKK----LIHKVYSFYGAHSAAYLRNLTH- 123
Query: 131 ENKTWRRLYDPNDPNTNRTITVEEITKMADGSNISPENVVEQIKKPVRFDSDSEFATLES 190
+ W + D TIT E+I + N++ IK + + + A +E+
Sbjct: 124 THSIWYEAIEKAD----NTITKEKIQEFFKA------NIINNIKDYILSITKEDIAQIEN 173
>gi|47564893|ref|ZP_00235937.1| uncharacterized phage-associated protein [Bacillus cereus G9241]
gi|47558266|gb|EAL16590.1| uncharacterized phage-associated protein [Bacillus cereus G9241]
Length = 169
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 17/152 (11%)
Query: 13 YSTIAVANFFIDKGVKYSIP---IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGP 69
+S VAN+F+++ S P + HLK+Q+ Y V ++ + E +AW GP
Sbjct: 19 HSVSQVANYFLNRSQNDSRPSTDVTHLKLQKLAYYAQAWHVTILRRRLFAERIEAWVHGP 78
Query: 70 VFVGVYHRFKYFDSHPI--EVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEI 127
V +Y ++++ I ++ + F N+ ++ ++W Y ++L+++
Sbjct: 79 VSPDLYSEYRHYGYQSIYGNIVQENQF-------NEPTLGVLNAVWITYGDKDAKELEKL 131
Query: 128 VQEENKTWRRLYDPNDPNT---NRTITVEEIT 156
E + W +L N P T N I+VE +
Sbjct: 132 THSE-EPW-KLARGNMPATMYGNNEISVEGMA 161
>gi|224541600|ref|ZP_03682139.1| hypothetical protein CATMIT_00771 [Catenibacterium mitsuokai DSM
15897]
gi|224525512|gb|EEF94617.1| hypothetical protein CATMIT_00771 [Catenibacterium mitsuokai DSM
15897]
Length = 332
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 11/129 (8%)
Query: 22 FIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYF 81
++ KG+ P L +Q+ +YL M E QAW GPV+ VYH FK F
Sbjct: 173 YLFKGLNEVTP---LMLQKLLYLIQGTSYALYDHPMFIEHSQAWVHGPVYPDVYHLFKQF 229
Query: 82 DSHPIEVIMDLSFRIFPKIAN---QEIGEIMESIWNKYQSHSTEQLQEIVQEENK--TWR 136
+PI+ D F +F ++ N +E +++ + + Y +S + L+ I ++ + R
Sbjct: 230 SFNPID---DDRFVLFEELENTLSEEECHVIDLVIHTYGLYSAKVLETITHTQDPWISAR 286
Query: 137 RLYDPNDPN 145
+ Y+ P+
Sbjct: 287 KGYEGTIPS 295
>gi|91228525|ref|ZP_01262446.1| Uncharacterized phage-associated protein [Vibrio alginolyticus
12G01]
gi|91187901|gb|EAS74212.1| Uncharacterized phage-associated protein [Vibrio alginolyticus
12G01]
Length = 155
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
YS + VA + + +L++Q+ Y+ H + ++ ++ ++ AWK GPV
Sbjct: 7 YSAVDVAWSLLKHAKEQGKCFSNLQLQKLTYVCHGLSLAHFQRPLVVDDVFAWKFGPVVP 66
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
VY RFK + S I D++ +QE I++ + +K + QL ++ E
Sbjct: 67 SVYFRFKSYGSSVITEQCDVAL-------DQESESIVKDVVSKLGHLTGPQLVDLTHREG 119
Query: 133 KTWRRLYD 140
W +++D
Sbjct: 120 SPWHQVWD 127
>gi|225870235|ref|YP_002746182.1| phage protein [Streptococcus equi subsp. equi 4047]
gi|225699639|emb|CAW93312.1| hypothetical phage protein [Streptococcus equi subsp. equi 4047]
Length = 180
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 41/72 (56%)
Query: 15 TIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+ VAN+ I+ +++ I++L+IQ+ +Y + +++ + ++ + WK GPV V
Sbjct: 4 ALFVANYIIEYCNDHNLEINNLRIQKLLYFINARNLVENGSPLFQDKIEKWKFGPVVPKV 63
Query: 75 YHRFKYFDSHPI 86
YH +K F + I
Sbjct: 64 YHEYKRFGASTI 75
>gi|194246651|ref|YP_002004290.1| phage-associated protein [Candidatus Phytoplasma mali]
gi|193807008|emb|CAP18444.1| phage-associated protein [Candidatus Phytoplasma mali]
Length = 217
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 70/125 (56%), Gaps = 20/125 (16%)
Query: 18 VANFFIDKGVKYSIP---IDHLKIQQFIYLTHCDVVLQ----KKKSMLDEEPQAWKQGPV 70
VAN+ I K K +P + H+K+ + IY ++ ++Q K K ++ E+P+AWK GPV
Sbjct: 47 VANYIITKSKK--LPNNNLTHMKLHKIIYYSYISYLIQNQTSKTKRLIFEKPKAWKYGPV 104
Query: 71 FVGVYHRFK-YFD---SHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQE 126
F ++H + Y++ + P+E ++S KI ++E E++ +I K ++ + QL E
Sbjct: 105 FGQLFHILRNYYEKIITKPLEG-GNMS-----KI-DKERAEVINNILEKTKNMNAVQLSE 157
Query: 127 IVQEE 131
I +
Sbjct: 158 ISHNQ 162
>gi|158422490|ref|YP_001523782.1| uncharacterized phage-associated protein [Azorhizobium caulinodans
ORS 571]
gi|158329379|dbj|BAF86864.1| uncharacterized phage-associated protein [Azorhizobium caulinodans
ORS 571]
Length = 213
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/127 (19%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+S++ +AN F+D + + +++ + +Y+ H ++ ++++E QAWK GPV
Sbjct: 63 HSSLTIANRFLDLANEEGDTLTPMQLLKLVYIAHGWMLGLYGVPLINDEVQAWKYGPVIP 122
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+YH F S P+ + + P ++ + +++ ++ Y + + +L + +
Sbjct: 123 KLYHSISQFRSDPVRGPLR-AHDPDPLVSVEN--ALIQQVYEIYGNMTGIELSRLTHQPG 179
Query: 133 KTWRRLY 139
W + Y
Sbjct: 180 SPWAQTY 186
>gi|67459185|ref|YP_246809.1| phage-associated protein [Rickettsia felis URRWXCal2]
gi|67004718|gb|AAY61644.1| Uncharacterized phage-associated protein [Rickettsia felis
URRWXCal2]
Length = 213
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 8 QTNPPYSTIAVANFF---IDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQA 64
Q S VAN+F +D+ + I LK+Q+ +Y + K + +EE +A
Sbjct: 5 QKEQALSCFDVANYFLVLVDR--EAGDIISQLKLQKLVYFAQGVHLALFNKPLFEEEIEA 62
Query: 65 WKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQL 124
W+ GPV + F I ++ F I+ ++ +M I++ Y HS L
Sbjct: 63 WQHGPVAPKLRIPFSSLKDGSIAASGEMDFDIY----TEQQKNLMYKIFSLYGEHSARYL 118
Query: 125 QEIVQEENKTWRRLYDPNDPNTNRTITVEEITKMADGSNISPENVVEQIKKPVRF---DS 181
+ + ++ WR + +D TIT E+I + N+V IK + D
Sbjct: 119 RNLTH-KHSIWREAIESSD----NTITKEKIQEFFKA------NIVNDIKDYILLITEDD 167
Query: 182 DSEFATLESQLVKGFKSMPP--QLTKEFQEAQVQIKKDSAI 220
+ E Q + S P +T E EA+ ++K+ I
Sbjct: 168 IQQMENAEDQWWMNYDSGVPAEDVTNEILEAKKELKEGKGI 208
>gi|270717131|ref|ZP_06223248.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
gi|319776465|ref|YP_004138953.1| hypothetical protein-related [Haemophilus influenzae F3047]
gi|319897242|ref|YP_004135437.1| uncharacterised protein, phage-related [Haemophilus influenzae
F3031]
gi|329123965|ref|ZP_08252514.1| hypothetical protein HMPREF9095_1732 [Haemophilus aegyptius ATCC
11116]
gi|270315532|gb|EFA27756.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
gi|317432746|emb|CBY81111.1| putative uncharacterised protein, phage-related [Haemophilus
influenzae F3031]
gi|317451056|emb|CBY87289.1| putative uncharacterised protein, phage-related [Haemophilus
influenzae F3047]
gi|327467759|gb|EGF13252.1| hypothetical protein HMPREF9095_1732 [Haemophilus aegyptius ATCC
11116]
Length = 146
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
Query: 12 PYSTIAVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV 70
YS + VAN FI K + IP + +K+Q+ ++ + K + ++E W+ GPV
Sbjct: 2 AYSAMQVANAFIQKAQEGKIPNLTPMKLQKLLFFAQSWYLKNNKSRLFNDEFIRWQYGPV 61
Query: 71 FVGVYHRFKYFDSHPIEVIMDLSFRI-FPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
VY+ F I+ SF F N+E ++ + Y ++ QL E+
Sbjct: 62 VQSVYYEFAKNKGTEIKHKAKNSFGTDFESRLNREDEFFLDELITAYGEYTGWQLSEMTH 121
Query: 130 EENKTWRR 137
+ W +
Sbjct: 122 TQGGAWEK 129
>gi|288904688|ref|YP_003429909.1| phage-associated protein [Streptococcus gallolyticus UCN34]
gi|288731413|emb|CBI12965.1| putative phage-associated protein [Streptococcus gallolyticus
UCN34]
Length = 179
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%)
Query: 15 TIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+ VAN+ I+ + + I++LK+Q+ +Y + +L+ + +E + WK GPV V
Sbjct: 4 ALFVANYIIEYSNERNYEINNLKLQKLLYFINARCLLENDVPIFEESFEKWKFGPVVPQV 63
Query: 75 YHRFKYFDSHPI 86
YH +K F + I
Sbjct: 64 YHEYKGFGAFNI 75
>gi|301300644|ref|ZP_07206833.1| hypothetical protein HMPREF9269_0365 [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300851752|gb|EFK79447.1| hypothetical protein HMPREF9269_0365 [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 168
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
S +AVANF I K P+ +LK+Q+ ++ + + +++ W+ GPV
Sbjct: 9 SPMAVANFIIGVAKKEDKPVTNLKLQKVLFFLQGYCLSEYDTPLINGNFSKWRYGPVEEE 68
Query: 74 VYHRFKYFDSHPIE 87
VY FKY+ PIE
Sbjct: 69 VYGDFKYYGPAPIE 82
>gi|260844980|ref|YP_003222758.1| hypothetical protein ECO103_2857 [Escherichia coli O103:H2 str.
12009]
gi|257760127|dbj|BAI31624.1| hypothetical protein ECO103_2857 [Escherichia coli O103:H2 str.
12009]
gi|323176675|gb|EFZ62265.1| hypothetical protein ECOK1180_4037 [Escherichia coli 1180]
Length = 156
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 22 FIDKGVKYSIP-IDHLKIQQFIYLTHC-DVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFK 79
FIDK + I + +K+Q+ ++ T + L K + D+ W GPV +YH K
Sbjct: 12 FIDKAKRGEIKDLTPMKLQKLLFYTQSWHLKLFNGKPLFDDLFARWPYGPVIPHLYHMLK 71
Query: 80 YFDSHPIE----VIMDLSF---RIFPKIANQ--EIGEIMESIWNKYQSHSTEQLQEIVQE 130
+ S+ I+ +I+D RI P I N E G +++ I Y S+S +L +
Sbjct: 72 KYGSNEIQEMISIIIDSDGEWKRITPTIQNGDTETGRLIDKIVEVYGSYSGTELSNMTHA 131
Query: 131 ENKTWRR 137
N W +
Sbjct: 132 PNAAWSK 138
>gi|227487241|ref|ZP_03917557.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227541589|ref|ZP_03971638.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227092899|gb|EEI28211.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227182557|gb|EEI63529.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51866]
Length = 177
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 56/131 (42%), Gaps = 3/131 (2%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
PYS VAN + + K + +K+Q+ +Y + + +L+ W GPV
Sbjct: 19 PYSPTVVANNILARAFKEKLYPTPMKLQKILYFVSSQYIKKTGHPLLESPFLTWAYGPVV 78
Query: 72 VGVYHRFKYFDSHPIE-VIMDLSFRIFPKIANQE--IGEIMESIWNKYQSHSTEQLQEIV 128
VY F+ F + I+ D + + + N++ + E + +W + L +I
Sbjct: 79 YTVYDEFRPFSKNGIKRYARDAAGQSYIVDENEDRALAESLSEVWEATKYRGAVDLSKIT 138
Query: 129 QEENKTWRRLY 139
+E+ W + Y
Sbjct: 139 HKESSAWDKAY 149
>gi|320536603|ref|ZP_08036624.1| conserved domain protein [Treponema phagedenis F0421]
gi|320146547|gb|EFW38142.1| conserved domain protein [Treponema phagedenis F0421]
Length = 139
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 66/141 (46%), Gaps = 8/141 (5%)
Query: 15 TIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+ VA + I++ PI +L++Q+ +Y + + + D+ +AW+ GPV V
Sbjct: 3 AMVVAQYIINRCTIEGNPISNLQLQKILYYVQVACLQELGEPCFDDPIEAWQFGPVVRAV 62
Query: 75 YHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKT 134
Y+++ F + PI+ D I++ I++++ ++ ++ L K
Sbjct: 63 YYQYCGFGAFPIDWEYD------SIISDSRKKTIIDTVIDEKKNLPPWALVFDDYSPGKA 116
Query: 135 WRRLYDPNDPNTNRTITVEEI 155
W R+Y N P TI++ ++
Sbjct: 117 WSRVYKNNSPKA--TISLRDM 135
>gi|125974149|ref|YP_001038059.1| phage-associated protein-like protein [Clostridium thermocellum
ATCC 27405]
gi|125714374|gb|ABN52866.1| Uncharacterized phage-associated protein-like protein [Clostridium
thermocellum ATCC 27405]
Length = 332
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 33 IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDL 92
I L +Q+ +Y + + + +E+ +AW GPV+ VY+R+ + PIE +
Sbjct: 182 ITPLALQKALYYVQGFYYAFEGRFLFEEDCEAWVHGPVYRDVYNRYSSYRFDPIESVEAF 241
Query: 93 SFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYD--PNDPNTNRTI 150
+F I++S+ + +S + L++ E K WR D P D ++NR I
Sbjct: 242 DESVFTTAEKA----ILDSVIKNFCCYSGKILEKFTHLE-KPWRYTRDGLPVDAHSNRVI 296
Query: 151 TVEEI 155
E I
Sbjct: 297 PKELI 301
>gi|167465465|ref|ZP_02330554.1| putative prophage protein (ps3) [Paenibacillus larvae subsp. larvae
BRL-230010]
Length = 154
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 5/146 (3%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR 77
VA +FI + HLK+Q+ Y + +SM D+E +AW GPV +Y
Sbjct: 7 VAKYFIKYANSRRELLCHLKLQKLCYYAQAWYLAFFGESMFDDEFEAWVHGPVNYKLYLD 66
Query: 78 FKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWR- 136
+K F PI+ + F+ + ++ +++ +W +Y + L+ + E+ W+
Sbjct: 67 YKKFGWSPIKENTE-GFQEDSIFDDNQL-HVLDQVWERYGRLDVKVLEALTHGED-PWKK 123
Query: 137 -RLYDPNDPNTNRTITVEEITKMADG 161
R+ NDP + I +++ G
Sbjct: 124 ARMLLENDPYSPAIIVKDDMMSFYRG 149
>gi|300864260|ref|ZP_07109140.1| putative Similar to A0ZKW1_NODSP prophage protein [Oscillatoria sp.
PCC 6506]
gi|300337725|emb|CBN54286.1| putative Similar to A0ZKW1_NODSP prophage protein [Oscillatoria sp.
PCC 6506]
Length = 195
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 7/137 (5%)
Query: 15 TIAVANFFIDKGVKYSIPID--HLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+ VA +FI + + I + ++K+Q+ +Y + + + EE QAW+ GPV
Sbjct: 4 CLNVACYFIIRAYEDGIEAEMTNMKVQKLLYYAQSLHLALYNEPLFAEEIQAWRYGPVCP 63
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
Y + F++ + + S FP E E++E IW + + +L ++ E
Sbjct: 64 PAYRFYSDFEARQLPIPRKESLSDFP----SEKKELLEEIWEYFGGYHAYRLSDMTHGEF 119
Query: 133 KTWRRLYDPNDPNTNRT 149
W+R P + T
Sbjct: 120 -PWKRARKGLPPQASST 135
>gi|209554130|ref|YP_002284448.1| hypothetical protein UUR10_0035 [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
gi|209541631|gb|ACI59860.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
Length = 157
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 20/152 (13%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHC-------DVVLQKKKSMLDEEPQAWK 66
+ + VAN+F+ K S+ + K+Q+ +Y + + V K + DE+ +AW
Sbjct: 5 TPLIVANWFLTKE---SMTLK--KVQKLVYYAYSWYLILMNEKVDDLKNKLFDEKIKAWV 59
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQE 126
GP +Y+ FK + I I D + + + N + +I+ +W++Y +S QL+
Sbjct: 60 HGPAIPMLYNEFKEHKYNSIPKINDFNEQEY---FNLDTIDILNQVWDEYGHYSANQLES 116
Query: 127 IVQEENKTW---RRLYDPNDPNTNRTITVEEI 155
I +E+ W R+ + P D + N I+ +EI
Sbjct: 117 ITHQED-PWIKARKGFGPLD-SCNAVISDKEI 146
>gi|119511541|ref|ZP_01630649.1| Putative prophage protein (ps3) [Nodularia spumigena CCY9414]
gi|119463776|gb|EAW44705.1| Putative prophage protein (ps3) [Nodularia spumigena CCY9414]
Length = 149
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 8/140 (5%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+S VAN+FI + I +LK+Q+ +Y + + + E+ QAW GPV
Sbjct: 5 FSCFNVANYFIWLANETGSFISNLKLQKLVYYAQAWHLALYETPLFPEDFQAWIHGPVIP 64
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIA-NQEIGEIMESIWNKYQSHSTEQLQEIVQ-E 130
+Y ++K F PI + D + P++ E+ E ++ + +Y + +L+++ E
Sbjct: 65 VLYQKYKPFGWQPI--LQDAN----PELELPDEVREFLDELAEEYFACDAYELEQMTHDE 118
Query: 131 ENKTWRRLYDPNDPNTNRTI 150
E W R +D +N I
Sbjct: 119 EPWKWARGNLASDAPSNEII 138
>gi|300864696|ref|ZP_07109552.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300337302|emb|CBN54700.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 210
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 7 TQTNPP-YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAW 65
TQTN + + +AN+FI K I+ K+Q+ +Y + + + DE+ QAW
Sbjct: 51 TQTNSEKLTCVDIANYFIWLASKTDREINVYKLQKLVYYAQAWHLGVYETLLFDEDFQAW 110
Query: 66 KQGPVFVGVYHRFKY-FDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQL 124
GPV + +++Y F+ PI ++ PK++ Q I E +E + Y + E L
Sbjct: 111 IHGPVIPDLLEKYQYQFNWEPIVEKIEK-----PKLSEQ-IEEFIEEVAEAYFEYDDETL 164
Query: 125 QEIVQEENKTW--RRLYDPNDPNTNRTITVEEITK 157
+ ++ E K W R P + + + I+ E + K
Sbjct: 165 ERMICSE-KPWLEARGDLPREESCHAIISQESMKK 198
>gi|291522557|emb|CBK80850.1| Uncharacterized phage-associated protein [Coprococcus catus GD/7]
Length = 144
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 36 LKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFR 95
+K+Q+ +YL+ + K++ E+ AW+ GP VY FK + I +S
Sbjct: 26 VKLQKILYLSQGWSFVWDSKALFPEDFCAWEYGPANEKVYETFKKYGRSEISAAEGIS-- 83
Query: 96 IFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPNDPNTNRTITV 152
+A+++ + +E++WN+Y + L +++ + W+ N TN I
Sbjct: 84 ---GVADKDARDTLEAVWNEYGKRTAYDLVDLICSQTP-WKNARADNIRITNACICT 136
>gi|288801930|ref|ZP_06407371.1| phage protein [Prevotella melaninogenica D18]
gi|288335365|gb|EFC73799.1| phage protein [Prevotella melaninogenica D18]
Length = 156
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 64/131 (48%), Gaps = 12/131 (9%)
Query: 28 KYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIE 87
+Y ID +K+ + +YLT + +++ + + +++ +AWK GPV V+ F+ H E
Sbjct: 18 EYGRQIDEMKLHKLLYLTQREAIIETGEPLFEDQFEAWKYGPVLYSVHKAFQTDKLHG-E 76
Query: 88 VIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPNDPNT- 146
++ + + + K + + +++ Y + L + E +WR+ + DP++
Sbjct: 77 MLSEETIGKYKK--------VFDKVFSSYAPKDSWSLSTLSHGEY-SWRKAREGYDPDSA 127
Query: 147 -NRTITVEEIT 156
I VE+I
Sbjct: 128 CRAKIRVEDIC 138
>gi|186701742|ref|ZP_02553389.2| conserved hypothetical protein [Ureaplasma parvum serovar 6 str.
ATCC 27818]
gi|186701012|gb|EDU19294.1| conserved hypothetical protein [Ureaplasma parvum serovar 6 str.
ATCC 27818]
Length = 157
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 22/153 (14%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHC-------DVVLQKKKSMLDEEPQAWK 66
+ + VAN+F+ K + K+Q+ +Y + + V K + DE+ +AW
Sbjct: 5 TPLIVANWFLTKE-----SMTPKKVQKLVYYAYSWYLTLMNEKVDDLKNKLFDEKIKAWV 59
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIMDLS-FRIFPKIANQEIGEIMESIWNKYQSHSTEQLQ 125
GP +Y+ FK + I I D + F N + +I+ +W++Y +S QL+
Sbjct: 60 HGPAIPMLYNEFKEHKYNSIPKINDFNELEYF----NLDTIDILNQVWDEYGHYSANQLE 115
Query: 126 EIVQEENKTW---RRLYDPNDPNTNRTITVEEI 155
I +E+ W R+ + P D + N I+ +EI
Sbjct: 116 SITHQED-PWIKARKGFGPLD-SCNAVISDKEI 146
>gi|260914611|ref|ZP_05921078.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
gi|260631302|gb|EEX49486.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
Length = 148
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 13 YSTIAVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
YS + VAN FI + ++ + +K+Q+ ++ + + + D+ W+ GPV
Sbjct: 3 YSAMQVANSFIQRAKDGAVTDLTPMKLQKLMFFAQSWSLKETGYPLFDDFFSRWQYGPVI 62
Query: 72 VGVYHRFKYFDSHPIEV--IMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
+YH FK F PI I + + + E+++ I +Y +S QL +
Sbjct: 63 PSIYHEFKSFRDQPITSYGIDVFGNTVMVSEDDPQSWELIDDIIKEYGEYSASQLSWMTH 122
Query: 130 EENKTW 135
+ W
Sbjct: 123 QPKTAW 128
>gi|119512866|ref|ZP_01631932.1| Putative prophage protein (ps3) [Nodularia spumigena CCY9414]
gi|119462494|gb|EAW43465.1| Putative prophage protein (ps3) [Nodularia spumigena CCY9414]
Length = 195
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Query: 14 STIAVANFFIDKGVKYSIPID--HLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
+ + A +FI + + I + ++K+Q+ +Y + + + + DEE QAW+ GPV
Sbjct: 3 NCLDAARYFIARAYEDGIEAEMTNMKVQKLLYYSQSLYLAVYDQPLFDEEIQAWRYGPVC 62
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
Y + F++ + + S + +I E ++E IW + + +L ++ E
Sbjct: 63 PPAYRFYSEFEAQQLPIP---SQELLLQIPQNE-KRLLEEIWGYFGGYHAYRLSDMTHLE 118
Query: 132 NKTWRRLYDPNDPNTNRT--ITVEEITKMA 159
W++ PN + T I +E++ +
Sbjct: 119 F-PWKKARQGLPPNASSTEPILLEDMKALG 147
>gi|237751053|ref|ZP_04581533.1| prophage ps3 protein [Helicobacter bilis ATCC 43879]
gi|229373498|gb|EEO23889.1| prophage ps3 protein [Helicobacter bilis ATCC 43879]
Length = 138
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 37/59 (62%)
Query: 30 SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEV 88
S + +L++Q+ +Y D + + KKS++D+ +AW+ GPV VY ++ + ++ I+V
Sbjct: 15 SKRLSNLELQKTLYFAEVDFIKEHKKSLIDDNFEAWQFGPVVRDVYMEYRDYGANSIDV 73
>gi|218281122|ref|ZP_03487657.1| hypothetical protein EUBIFOR_00218 [Eubacterium biforme DSM 3989]
gi|218217636|gb|EEC91174.1| hypothetical protein EUBIFOR_00218 [Eubacterium biforme DSM 3989]
Length = 333
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Query: 36 LKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFR 95
L +Q+ +Y + + M +E +AW GPV+ VY+ FK F + I+ + F
Sbjct: 183 LMLQKLLYYIQGLSFVLNGREMFEENCEAWVHGPVYKDVYNIFKQFGFNVIDDPKFIMFE 242
Query: 96 IFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTW---RRLYDPNDPNTNRTITV 152
+ K + E I++ + N + + + L++ +EN W R Y + P +N IT
Sbjct: 243 GYKKYLDDEDKYIIDLVVNTFGQYGGKTLEKTTHKEN-PWLIARNGYGDDIP-SNELITK 300
Query: 153 EEI----TKMADGSNISPE 167
+ I K+ + +IS E
Sbjct: 301 DSIKNYFIKICNEYDISKE 319
>gi|153869744|ref|ZP_01999277.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152073781|gb|EDN70714.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 144
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 18 VANFFIDKGVK-YSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYH 76
VANFFI KG+ I +LK+Q+ +Y ++++ E AW GPV +Y
Sbjct: 7 VANFFIMKGIDDEESGISNLKLQKLLYYAKGFHQAIFEEALFPENLWAWTYGPVVPEMYQ 66
Query: 77 RFKYFDSHPI-EVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTW 135
+K + PI +V D + R ++E E++ +W+ + S +L+++ E K W
Sbjct: 67 AYKQYGKDPITQVEYDPTHRF-----DEEQLELLNEVWSTFGQFSAWKLRDMTHNE-KPW 120
>gi|239621772|ref|ZP_04664803.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|239514963|gb|EEQ54830.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
Length = 159
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 3/121 (2%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR 77
VAN + + + +K+Q+ ++ C + +L E Q W+ GPV VY
Sbjct: 11 VANSILRRAFGTDEHVTPMKLQKLLFFVTCLYQRYTGRRLLTESFQPWQYGPVCRSVYDE 70
Query: 78 FKYFDSHPIEVIMDLSFRIFPKI---ANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKT 134
FK F PI + + ++ + + + +W S +L + N
Sbjct: 71 FKGFGGKPINRYAQDALGKVTAVDESSSPSLRKALNLVWENMGDLSAVKLSRVTHRPNSA 130
Query: 135 W 135
W
Sbjct: 131 W 131
>gi|197294208|ref|YP_001798749.1| phage-associated protein [Candidatus Phytoplasma australiense]
gi|171853535|emb|CAM11393.1| Uncharacterized phage-associated protein [Candidatus Phytoplasma
australiense]
Length = 163
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 17 AVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYH 76
A+AN+ I ++ ++H K+Q+ +Y H ++ K+S+ + +AW++GP+F ++
Sbjct: 15 ALANYLIQ-----NMEVNHWKLQKLLYYAHAKHLVDFKESLAAAQVEAWEKGPIFRTLFD 69
Query: 77 RFKYFDSHPI 86
+ K DS I
Sbjct: 70 KLKDHDSKEI 79
>gi|237750673|ref|ZP_04581153.1| prophage ps3 protein [Helicobacter bilis ATCC 43879]
gi|229373763|gb|EEO24154.1| prophage ps3 protein [Helicobacter bilis ATCC 43879]
Length = 175
Score = 42.7 bits (99), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 23/151 (15%)
Query: 14 STIAVANFFI--------------DKGVKYSIPID---HLKIQQFIYLTHCDVVLQKKKS 56
+ + VAN+F+ DK ++ D HLK+Q+ +Y + K
Sbjct: 3 NVVNVANYFLLLNKRRYEKISSEDDKDSRFQTEADMITHLKLQKLVYYAQGLYLAYFNKP 62
Query: 57 MLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGE--IMESIWN 114
+ + +AW+ GPV +YH FK + + +M L+ +I + E I++ +
Sbjct: 63 LFTQSVEAWRHGPVVNDLYHIFKPYHKND---LMPLADKINENDLQLDDNEKFIIKMTFK 119
Query: 115 KYQSHSTEQLQEIVQEENKTWRRLYDPNDPN 145
+Y S L++ EE TW Y+ N N
Sbjct: 120 RYGGLSANTLRDKTHEE-PTWLNTYELNKNN 149
>gi|294783258|ref|ZP_06748582.1| phage-associated protein [Fusobacterium sp. 1_1_41FAA]
gi|294480136|gb|EFG27913.1| phage-associated protein [Fusobacterium sp. 1_1_41FAA]
Length = 152
Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
Y + +A + I K + I +L++Q+ ++ + + ++ + +AW+ GPV
Sbjct: 4 YDALDIAKYIIRWCDKNKLRITNLQLQKILFFIQKESIRKRGYGIFSNRIEAWQYGPVVP 63
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPK-IANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
V+++F F + + + DL + PK I + + EI+E I +Y S L
Sbjct: 64 DVFYQFAGFGAMKLVLYEDLFSDVSPKDIIDDQSKEIIEGILREYIHVSPWDLVAKSHVS 123
Query: 132 NKTW 135
N W
Sbjct: 124 NGAW 127
>gi|153869049|ref|ZP_01998748.1| phage-associated protein [Beggiatoa sp. PS]
gi|152074402|gb|EDN71261.1| phage-associated protein [Beggiatoa sp. PS]
Length = 144
Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 33 IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDL 92
I +LK+Q+ +Y + + + E +AW GPV +++ ++ ++++ I DL
Sbjct: 23 ISNLKLQKLVYYAQGINLALHELPLFPETLEAWIHGPVVPVLFYTYQRYNANAIPPPNDL 82
Query: 93 SFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
F I+ N +I E+++ ++ + +S +L ++ EE
Sbjct: 83 DFSIY----NSQIRELLDEVYVVFGQYSAWKLYQMTHEE 117
>gi|261866994|ref|YP_003254916.1| hypothetical protein D11S_0286 [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261412326|gb|ACX81697.1| hypothetical protein D11S_0286 [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 147
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 13 YSTIAVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
YS+IA+AN FI K I + +K+Q+ ++ T + K + + + W+ GPV
Sbjct: 3 YSSIAIANSFIGKANIGEISNLTPMKLQKLMFYTQSWYIKLYGKPLFEGGVERWQFGPVL 62
Query: 72 VGVYHRFKYFDSHPI 86
+YH FK F S I
Sbjct: 63 PEIYHEFKPFGSRII 77
>gi|159029382|emb|CAO90758.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 195
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 6/119 (5%)
Query: 15 TIAVANFFIDKGVKYSIPID--HLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+ VA +FI + + I + ++K+Q+ +Y + + + EE QAW+ GPV
Sbjct: 4 CLTVARYFIIRAYEDGIDAEMTNMKVQKLLYYAQSLHLALYDEPLFKEEIQAWRYGPVCP 63
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
Y + F++ + + S P E E++E IW + ++ +L ++ E
Sbjct: 64 AAYKFYSDFEAKQLPIPRQESLSGLP----SEKKELLEEIWQYFGNYHAYRLSDMTHAE 118
>gi|269977797|ref|ZP_06184754.1| putative phage-associated protein [Mobiluncus mulieris 28-1]
gi|269933967|gb|EEZ90544.1| putative phage-associated protein [Mobiluncus mulieris 28-1]
Length = 201
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 17 AVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVY 75
AVA + + + P + LK+ + +YL + + + ++D + +A++ GPV +
Sbjct: 24 AVAEYILMLDSRREDPDVTQLKLHKLLYLAQANYLASTGRRLMDSDVEAFRHGPVIDAIR 83
Query: 76 HRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTW 135
+K +D ++I++ + + + IW YQ +S L+ + ++ W
Sbjct: 84 STYKPYDR---DIIVNRRKPSKKTTLPPDAADFLNRIWEMYQDNSASYLRNLTHRQD-PW 139
Query: 136 RRLY 139
R Y
Sbjct: 140 RDNY 143
>gi|295112182|emb|CBL28932.1| Uncharacterized phage-associated protein [Synergistetes bacterium
SGP1]
Length = 139
Score = 42.4 bits (98), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 9/145 (6%)
Query: 15 TIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+ +A + + K VK S I +L++Q+ +Y D + + + + LD +AW GPV V
Sbjct: 3 ALDLAKYIVTKCVKDSCAISNLQLQKILYFIQKDFLCRGEFAFLDAI-EAWPFGPVVPAV 61
Query: 75 YHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKT 134
Y+ F F S I + I K I I+E+ + L E +N
Sbjct: 62 YYHFCIFGSMSITTAYE-GITIEAK-DRARIDPIVEA----KRVLPPWDLVEDTHRKNGA 115
Query: 135 WRRLYDPNDPNTNRTITVEEITKMA 159
W ++Y D NR + ++ K+A
Sbjct: 116 WDQIY--QDGAGNRKVIPPDLIKVA 138
>gi|189183561|ref|YP_001937346.1| hypothetical protein OTT_0654 [Orientia tsutsugamushi str. Ikeda]
gi|189180332|dbj|BAG40112.1| hypothetical protein OTT_0654 [Orientia tsutsugamushi str. Ikeda]
Length = 197
Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 14/156 (8%)
Query: 5 TFTQTNPPYSTIAVANFF---IDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEE 61
T Q S VA++F +D+ + I LK+Q+ +Y + K + E+
Sbjct: 2 TIQQKGELLSCFDVASYFLVLVDR--EAGDVITQLKLQKLVYFAQGVHLALFDKHLFKED 59
Query: 62 PQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHST 121
+AW+ GPV + F F+++ I + F I+ NQ+ E++ I++ Y H+
Sbjct: 60 IEAWENGPVVRHLRSIFGGFEANAIPAPGQIDFSIY---TNQQ-KELIYKIYSSYGEHTA 115
Query: 122 EQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITK 157
L+++ + + + P +R IT EE+ K
Sbjct: 116 SYLRDLTHLHSILQQAIIRP-----SRVITKEEMRK 146
>gi|253682420|ref|ZP_04863217.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
gi|253562132|gb|EES91584.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
Length = 335
Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 23 IDKGVKY----SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRF 78
ID VKY + I L +Q+ +Y + + + + + +AW GPV+ +YH +
Sbjct: 168 IDSVVKYILYKCVDITPLALQKLLYYCQGFYKVFNGEYLFNNDCEAWVHGPVYKSIYHEY 227
Query: 79 KYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN--KTWR 136
K + +PIE ++ + +I EI+++I +S + L++I E +T R
Sbjct: 228 KNYGYNPIEENIEFNHGELTEIER----EIIDNIIINLGCYSGKILEKITHSEMPWRTTR 283
Query: 137 RLYDPNDPNTNRTITVEEI 155
+ D N+ ++R I E I
Sbjct: 284 KGLDANEL-SDRIINKELI 301
>gi|306817761|ref|ZP_07451502.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
gi|304649410|gb|EFM46694.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
Length = 208
Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 17 AVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVY 75
AVA + + + P + LK+ + +YL + + + ++D + +A++ GPV +
Sbjct: 31 AVAEYILMLDSRREDPDVTQLKLHKLLYLAQANYLASTGRRLMDSDVEAFRHGPVIDAIR 90
Query: 76 HRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTW 135
+K +D ++I++ + + + IW YQ +S L+ + ++ W
Sbjct: 91 STYKPYDR---DIIVNRHKPSKKTTLPPDAADFLNRIWEMYQDNSASYLRNLTHRQD-PW 146
Query: 136 RRLY 139
R Y
Sbjct: 147 RDNY 150
>gi|300772213|ref|ZP_07082083.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
gi|300760516|gb|EFK57342.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
Length = 169
Score = 42.4 bits (98), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 13/137 (9%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR 77
+A FF+ K V LK+Q+ +Y + V + + + +AW GPV ++++
Sbjct: 11 IAPFFVKKKVS------PLKLQKLLYYSQVWYVKKFDLKLFSDPIKAWVFGPVVPVIWNK 64
Query: 78 FKYFDSHPIEVIMDLS-FRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE---NK 133
FK ++I ++ F P I Q + + +E IWN Y S +L ++ E N
Sbjct: 65 FKIVRRS--DIIAPIAHFYPCPTILPQNVLDHLEEIWNSYGHLSGSELVDLTHSEYPWNA 122
Query: 134 TWRRLYDPNDPNTNRTI 150
+ + L D P+ N I
Sbjct: 123 SRKGLLD-TQPSDNEII 138
>gi|157964587|ref|YP_001499411.1| Phage-associated protein [Rickettsia massiliae MTU5]
gi|157844363|gb|ABV84864.1| Phage-associated protein [Rickettsia massiliae MTU5]
Length = 207
Score = 42.4 bits (98), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 9/119 (7%)
Query: 14 STIAVANFF---IDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV 70
S VAN+F +D+ SI LK+Q+ IY + K + +EE +AWK GPV
Sbjct: 11 SCFDVANYFLVLVDREAGDSIT--QLKLQKLIYFAQGIHLALFDKVLFEEEIKAWKHGPV 68
Query: 71 FVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
+ F F + I + ++ F I+ ++ +++ +++ Y HS L+ +
Sbjct: 69 VPALRSIFGSFRDNVIPLPGEIDFAIY----TEQQKKLLHKVYSFYGEHSAAYLRNLTH 123
>gi|149908524|ref|ZP_01897186.1| possible prophage ps3 protein01-like protein [Moritella sp. PE36]
gi|149808358|gb|EDM68295.1| possible prophage ps3 protein01-like protein [Moritella sp. PE36]
Length = 145
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 33 IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDL 92
I +LK+Q+ Y + K + D+E QAW GPV +YH++K + ++ D
Sbjct: 23 ITNLKLQKITYYAQGFYLALFDKPLFDDEIQAWAHGPVIPDLYHKYKI--NGKNHIVSDA 80
Query: 93 SFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
F +A QE E + +++ + S +L+ + EE
Sbjct: 81 MFDAEKCLAEQE-REHLNDVYDIFGQFSAWKLRNMTHEE 118
>gi|33152650|ref|NP_874003.1| prophage ps3 protein01-like protein [Haemophilus ducreyi 35000HP]
gi|33148874|gb|AAP96392.1| possible prophage ps3 protein01-like protein [Haemophilus ducreyi
35000HP]
Length = 132
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 33 IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDL 92
I +LKIQ+ +Y + K + E+ QAW GPV +Y+++K + + + DL
Sbjct: 31 ISNLKIQKLVYYAQGFSLAINNKPLFSEKIQAWTHGPVTPELYNKYKQYGNGALPTT-DL 89
Query: 93 SFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
F K +N+E +++ I + Y S +L+ + EE
Sbjct: 90 DID-FDKFSNEE-KDLLNDINDVYGQFSAWKLRNMTHEE 126
>gi|254453001|ref|ZP_05066438.1| hypothetical protein OA238_3618 [Octadecabacter antarcticus 238]
gi|198267407|gb|EDY91677.1| hypothetical protein OA238_3618 [Octadecabacter antarcticus 238]
Length = 86
Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 57 MLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQE---IGEIMESIW 113
M E P+ WK GPVF +YH FK F PI + P+ +Q+ ++ IW
Sbjct: 1 MTTEGPEIWKHGPVFDSLYHAFKVFGRKPITAPQSSNPFAAPENVDQDDENTRNLVTWIW 60
Query: 114 NKYQSHSTEQLQEIVQEE 131
+Y S L ++ ++
Sbjct: 61 GRYGHLSGFALSDLTHKD 78
>gi|257059424|ref|YP_003137312.1| phage-associated protein [Cyanothece sp. PCC 8802]
gi|256589590|gb|ACV00477.1| uncharacterized phage-associated protein [Cyanothece sp. PCC 8802]
Length = 196
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 6/120 (5%)
Query: 14 STIAVANFFIDKGVKYSIP--IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
S + VA +FI + + I ++K+Q+ +Y T C + + + EE QAW+ GPV
Sbjct: 3 SPLEVAKYFIIRAYEEGRENHITNMKVQKLLYYTQCLHLALYNEPLFAEEIQAWRYGPVC 62
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
Y + F++ + + QE +++E +W + + L ++ E
Sbjct: 63 PPAYRFYSEFEAQQLPIPTQNKLETL----TQEKLDLLEEVWQYFGEYHAYYLSDMTHLE 118
>gi|288573122|ref|ZP_06391479.1| phage-associated protein [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288568863|gb|EFC90420.1| phage-associated protein [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 149
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Query: 14 STIAVANFFIDKG-VKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
S VA++ + K + I HLK+Q+ +Y V+ + + E +AW GPV
Sbjct: 3 SVFDVASYILSKADLDEGDGITHLKLQKLVYYAQGFSVVLLGRPLFPETIEAWTHGPVVP 62
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
+Y+++++F + I + P E +++ +++ Y +S +L+ + E
Sbjct: 63 ELYNKYRHFGPNVISKAQGGT----PDNLTTEEKTLIDDVFSVYGEYSASKLRNLTHNE 117
>gi|314940587|ref|ZP_07847721.1| conserved hypothetical protein [Enterococcus faecium TX0133a04]
gi|314942538|ref|ZP_07849376.1| conserved hypothetical protein [Enterococcus faecium TX0133C]
gi|314953905|ref|ZP_07856764.1| conserved hypothetical protein [Enterococcus faecium TX0133A]
gi|314992729|ref|ZP_07858139.1| conserved hypothetical protein [Enterococcus faecium TX0133B]
gi|314996740|ref|ZP_07861760.1| conserved hypothetical protein [Enterococcus faecium TX0133a01]
gi|313589126|gb|EFR67971.1| conserved hypothetical protein [Enterococcus faecium TX0133a01]
gi|313592749|gb|EFR71594.1| conserved hypothetical protein [Enterococcus faecium TX0133B]
gi|313594122|gb|EFR72967.1| conserved hypothetical protein [Enterococcus faecium TX0133A]
gi|313598697|gb|EFR77542.1| conserved hypothetical protein [Enterococcus faecium TX0133C]
gi|313640232|gb|EFS04813.1| conserved hypothetical protein [Enterococcus faecium TX0133a04]
Length = 155
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
Query: 18 VANFFI-DKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYH 76
VA +F+ + V I LKIQ+ +Y + + ++D E +AW GPV VYH
Sbjct: 7 VAKWFVANTDVASGSQITPLKIQKLLYYAQAWYLAIYNEPLMDTEFEAWAHGPVVPEVYH 66
Query: 77 RFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWR 136
F +P+ + + F +++ ++ ++++ I + Y + + L+++ +E+ +
Sbjct: 67 GLSDFKYNPVSISAEY-FSDAEEVSCEQEVDLLQQIMDIYGIYDGKYLEKLTHQEDPWIQ 125
Query: 137 RLYD-PNDPNTNRTITVE 153
D P + N I+ E
Sbjct: 126 TRGDLPPEARCNEVISRE 143
>gi|225550956|ref|ZP_03771905.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 2
str. ATCC 27814]
gi|225380110|gb|EEH02472.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 2
str. ATCC 27814]
Length = 157
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 20/152 (13%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHC-------DVVLQKKKSMLDEEPQAWK 66
+ + VAN+F+ K S+ + K+Q+ +Y + + V K + DE+ +A
Sbjct: 5 TPLIVANWFL---TKESMTLK--KVQKLVYYAYSWYLILMNEKVDDLKNKLFDEKIKARV 59
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQE 126
GP +Y+ FK + I I D + + + N + +I+ +W++Y +S QL+
Sbjct: 60 HGPAIPMLYNEFKEHKYNSIPKINDFNEQEY---FNLDTIDILNQVWDEYGHYSANQLES 116
Query: 127 IVQEENKTW---RRLYDPNDPNTNRTITVEEI 155
I +E+ W R+ + P D + N TI+ +EI
Sbjct: 117 ITHQED-PWIKARKGFGPLD-SCNETISDKEI 146
>gi|283955465|ref|ZP_06372962.1| hypothetical protein C414_000470009 [Campylobacter jejuni subsp.
jejuni 414]
gi|283793038|gb|EFC31810.1| hypothetical protein C414_000470009 [Campylobacter jejuni subsp.
jejuni 414]
Length = 143
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
S + +A + + K K + +L++Q+ +Y T D + + K ++ +E +AWK GPV
Sbjct: 3 SALDLAKYILKKSNK---ELSNLELQKTLYFTELDYIKKFNKHLIKDEFEAWKYGPVSRE 59
Query: 74 VYHRFKYFDSHPIE 87
VY ++ + ++ I+
Sbjct: 60 VYCEYRNYGANSID 73
>gi|146329725|ref|YP_001209182.1| hypothetical protein DNO_0260 [Dichelobacter nodosus VCS1703A]
gi|1628368|emb|CAA67161.1| gepA [Dichelobacter nodosus]
gi|146233195|gb|ABQ14173.1| conserved hypothetical protein [Dichelobacter nodosus VCS1703A]
Length = 156
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 62/130 (47%), Gaps = 5/130 (3%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
Y I VA+ + + P+ +LK+Q+ YL + + M + +AWK GPV
Sbjct: 6 YKAIDVADALVRLALADKKPLTNLKVQKLTYLVYGCWLGFTNFQMFQDRVEAWKYGPVIP 65
Query: 73 GVYHRFKYFDSHPI-EVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
+Y++ + ++ I E I++ + P + E +++ I+N+++ QL + ++
Sbjct: 66 VLYNQLARYGANFIQEPILEKN----PIPKDSEEYQLIHDIYNEFKDLKAWQLVYLTHQK 121
Query: 132 NKTWRRLYDP 141
W + + P
Sbjct: 122 GSPWHQTHTP 131
>gi|261416854|ref|YP_003250537.1| Uncharacterized phage-associated protein-like protein [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261373310|gb|ACX76055.1| Uncharacterized phage-associated protein-like protein [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|302327608|gb|ADL26809.1| conserved hypothetical protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 145
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 55/120 (45%), Gaps = 6/120 (5%)
Query: 13 YSTIAVANFFIDKGVKYSIPI-DHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
Y + +A + K + + + +LK+Q+ +Y + + DE +AW GPV
Sbjct: 3 YKALQIAQLLLSKAAERNQELMSNLKLQKMLYYEQGFHLAAFDTPLFDENIEAWMFGPVV 62
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
VY ++ +D+ IE + ++ N+E + ++++ Y +S +L E+ E
Sbjct: 63 PEVYEKYAKYDAKGIEPPTQIDIKL-----NEEETTLFNNVFDVYNQYSAVKLVEMTHSE 117
>gi|197294474|ref|YP_001799015.1| phage-associated protein [Candidatus Phytoplasma australiense]
gi|171853801|emb|CAM11737.1| Uncharacterized phage-associated protein [Candidatus Phytoplasma
australiense]
Length = 159
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 36 LKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPI 86
+K+ + IY H ++Q KK +L E+ Q W GPVF + + K F PI
Sbjct: 27 MKLNKMIYYAHTKHLVQTKKPLLKEQIQTWIYGPVFPELCKQLKEFTYQPI 77
>gi|224543434|ref|ZP_03683973.1| hypothetical protein CATMIT_02643 [Catenibacterium mitsuokai DSM
15897]
gi|224523561|gb|EEF92666.1| hypothetical protein CATMIT_02643 [Catenibacterium mitsuokai DSM
15897]
Length = 204
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDE-EPQAWKQGPVFVGVYH 76
VA++F+ KG + + KIQ+ Y + + + D E +AW GPV +Y
Sbjct: 59 VADWFLLKG-----NMSNKKIQKLCYYAEAWSLTLLDQDIADHSEFEAWVHGPVNPTLYQ 113
Query: 77 RFKYFDSHPIEVIMDLSFRIFPKIANQ---EIGEIMESIWNKYQSHSTEQLQEIVQEE 131
FK + H +++ + ++ N E E++E++W+ Y + +QL+ + E
Sbjct: 114 TFKGYGWHELKITN--REEVMARMENLFTPEQVEVLEAVWDTYGEYGADQLEALTHTE 169
>gi|296501671|ref|YP_003663371.1| prophage protein 01 [Bacillus thuringiensis BMB171]
gi|296322723|gb|ADH05651.1| Prophage ps3 protein 01 [Bacillus thuringiensis BMB171]
Length = 349
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 10/145 (6%)
Query: 18 VANFFIDKG-----VKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
V FFI KG + + LK+Q+ +Y ++ ++ QAW GPV
Sbjct: 191 VEMFFIIKGQELDDEDDDLRVSPLKLQKLMYYAQGWTFAYTGLNLYKDDFQAWVHGPVIP 250
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+Y ++K + S I+ + +I E +I+ +WN+Y + L+++ E+
Sbjct: 251 DLYAKYKEYGSRRID--ENFGMKIESLKLTFEQLQILHWVWNQYSKFEAKFLEDLTHMES 308
Query: 133 KTWR--RLYDPNDPNTNRTITVEEI 155
WR R PN+ N I E+I
Sbjct: 309 -PWRNTRGDLPNNQGCNWIIRKEDI 332
>gi|282900240|ref|ZP_06308193.1| Putative prophage protein (Ps3) [Cylindrospermopsis raciborskii
CS-505]
gi|281194882|gb|EFA69826.1| Putative prophage protein (Ps3) [Cylindrospermopsis raciborskii
CS-505]
Length = 152
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR 77
VA +FI + I +LK+Q+ +Y + ++ +EE +AW GPV +Y +
Sbjct: 7 VARYFIHLANETGSYISNLKLQKLVYYAQAWHLALYDTALFEEEFEAWVHGPVIPVLYQQ 66
Query: 78 FKYFDSHPIE 87
+K F PI+
Sbjct: 67 YKGFGWRPIQ 76
>gi|315168861|gb|EFU12878.1| conserved hypothetical protein [Enterococcus faecalis TX1341]
Length = 151
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 10 NPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHC-DVVLQKKKSMLDEEPQAWKQG 68
N YS +A++F++K + K+Q+ Y + L + D E QAW G
Sbjct: 2 NKKYSIFEIADWFLNKE-----SMTPKKLQKLCYYAQAWNNALLDDSIIDDSEFQAWAHG 56
Query: 69 PVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIV 128
PV +Y++++ + + I P + + +++ES+W Y S +L+ +
Sbjct: 57 PVSPELYNKYREYRWNSIPKCTS------PAAIDNQTVDVLESVWITYGDKSANELEALT 110
Query: 129 QEE 131
E
Sbjct: 111 HTE 113
>gi|13357589|ref|NP_077863.1| hypothetical protein UU033 [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|170762084|ref|YP_001752113.1| hypothetical protein UPA3_0033 [Ureaplasma parvum serovar 3 str.
ATCC 27815]
gi|11345919|pir||F82941 hypothetical UU033 [imported] - Ureaplasma urealyticum
gi|6898980|gb|AAF30438.1|AE002103_3 hypothetical [Ureaplasma parvum serovar 3 str. ATCC 700970]
gi|168827661|gb|ACA32923.1| conserved hypothetical protein [Ureaplasma parvum serovar 3 str.
ATCC 27815]
Length = 157
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 22/153 (14%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHC-------DVVLQKKKSMLDEEPQAWK 66
+ + VAN+F+ K + K+Q+ +Y + + V K + DE+ +AW
Sbjct: 5 TPLIVANWFLTKE-----SMTPKKVQKLVYYAYSWYLTLMNEKVDDLKNKLFDEKIKAWV 59
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIMDLS-FRIFPKIANQEIGEIMESIWNKYQSHSTEQLQ 125
P +Y+ FK + I I D + F N + +I+ +W++Y +S QL+
Sbjct: 60 HEPAIPMLYNEFKEHKYNSIPKINDFNELEYF----NLDTIDILNQVWDEYGHYSANQLE 115
Query: 126 EIVQEENKTW---RRLYDPNDPNTNRTITVEEI 155
I +E+ W R+ + P D + N I+ +EI
Sbjct: 116 SITHQED-PWIKARKGFGPLD-SCNAVISDKEI 146
>gi|146173942|ref|XP_001019205.2| hypothetical protein TTHERM_00997650 [Tetrahymena thermophila]
gi|146144816|gb|EAR98960.2| hypothetical protein TTHERM_00997650 [Tetrahymena thermophila
SB210]
Length = 468
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 67/139 (48%), Gaps = 14/139 (10%)
Query: 107 EIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKMADGSNISP 166
EI+ +I ++ + + +EIVQ+ W++ ++ N P T + + ++ K+A G N+
Sbjct: 3 EILSNILESKKTKTLREYEEIVQKSGMIWKKSFEYNTPITGQ-VNFDDFFKIA-GKNV-- 58
Query: 167 ENVVEQIKKPVRFDSDSEFA--------TLESQLVKGFKSMPPQL--TKEFQEAQVQIKK 216
+ V + I K + E+ T+ ++V+GF+ M PQ +F E +++
Sbjct: 59 QKVCKFIVKCIDRGDSIEYVRSVQFFYKTVSGEIVEGFQQMHPQAPSKGKFAEKIFELED 118
Query: 217 DSAIARSIQESNIMRFAYS 235
D I + I + + A+
Sbjct: 119 DEYIIKMIGRTGLFLDAFG 137
>gi|294782259|ref|ZP_06747585.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA]
gi|294480900|gb|EFG28675.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA]
Length = 142
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+ + +A F + + PI +L++Q+ +Y + ++ +++ + +AW+ GPV
Sbjct: 2 FDAVQLAWFILRRCANSGTPISNLQLQKMLYFLQRANLQRENEALFFQNIRAWQFGPVVR 61
Query: 73 GVYHRFKYF----------DSHPIEVIMD 91
VY+ F F D +P+++I++
Sbjct: 62 EVYYTFSVFSSLKIIPEDSDPNPVDIILE 90
>gi|208435383|ref|YP_002267049.1| hypothetical protein HPG27_1440 [Helicobacter pylori G27]
gi|208433312|gb|ACI28183.1| hypothetical protein HPG27_1440 [Helicobacter pylori G27]
Length = 145
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+T+ +A + + K + +L++Q+ +Y T D + + K ++ ++ +AWK GPV
Sbjct: 3 NTLELAKYILKHSNK---ELSNLELQKTLYFTELDYIKKFDKHLVSDDFEAWKYGPVARE 59
Query: 74 VYHRFKYFDSHPIE 87
VY+ ++ + ++ I+
Sbjct: 60 VYYEYRNYGANSID 73
>gi|325996551|gb|ADZ51956.1| Uncharacterized phage-associated protein [Helicobacter pylori 2018]
gi|325998140|gb|ADZ50348.1| putative phage-associated protein [Helicobacter pylori 2017]
Length = 148
Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 9/123 (7%)
Query: 15 TIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+ A I+ + PI +LK+Q+ +Y+ + ++ E+ QAW GPV V
Sbjct: 3 ALDAAKILINLSLDNQKPITNLKLQKMLYIAQA----ESDSKLIKEDFQAWDYGPVIPDV 58
Query: 75 YHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKT 134
Y F S PI ++ P ++E + + I+N+Y+ + ++
Sbjct: 59 YRNFCINGSTPITKREEI-----PNNIDREKEKELAKIYNQYKDADAWNMVRATHQKESA 113
Query: 135 WRR 137
W +
Sbjct: 114 WSK 116
>gi|39938576|ref|NP_950342.1| uncharacterized phage-associated protein [Onion yellows
phytoplasma OY-M]
gi|39721685|dbj|BAD04175.1| uncharacterized phage-associated protein [Onion yellows
phytoplasma OY-M]
Length = 66
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 19 ANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
AN+ I K I ++H+K+Q+ +Y ++ + + K+S+ +AW++GPVF
Sbjct: 16 ANYIIKK-----IDVNHMKLQKLLYYSYAAYLFKYKESLSVNLVEAWQKGPVF 63
>gi|269124040|ref|YP_003306617.1| Putative phage-associated protein [Streptobacillus moniliformis
DSM 12112]
gi|268315366|gb|ACZ01740.1| Putative phage-associated protein [Streptobacillus moniliformis
DSM 12112]
Length = 169
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 16 IAVANFFIDKGVK-YSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
I VA F + + + YS ID +K+Q+ IY T + +L + E+ +AW+ GPV + V
Sbjct: 10 IEVARFIVKRYKEMYSENIDEIKLQKLIYFTQKESILYTGNLLFIEKMKAWRLGPVSIKV 69
Query: 75 YHRFK 79
+ ++
Sbjct: 70 RNGYR 74
>gi|227501664|ref|ZP_03931713.1| possible phage-associated protein [Corynebacterium accolens ATCC
49725]
gi|227077689|gb|EEI15652.1| possible phage-associated protein [Corynebacterium accolens ATCC
49725]
Length = 149
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 36 LKIQQFIYLTHCDVVLQKKK-SMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIE----VIM 90
LKIQ+ +Y + + +E +AW GPV V +YH K + PI+ +
Sbjct: 28 LKIQKLLYYAKGLYMRASGGVPLFNERMEAWAHGPVVVDIYHELKKYGKSPIDPDTFISD 87
Query: 91 DLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRR 137
D ++ + + + I +WNKY +S L+ E+ W++
Sbjct: 88 DFNWDDYRPVEDTLI-----EVWNKYGPYSAWALRNKTHTES-PWKK 128
>gi|188528286|ref|YP_001910973.1| Uncharacterized phage-associated protein [Helicobacter pylori
Shi470]
gi|188144526|gb|ACD48943.1| Uncharacterized phage-associated protein [Helicobacter pylori
Shi470]
Length = 145
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+T+ +A + + K + +L++Q+ +Y T D + + K ++ ++ +AWK GPV
Sbjct: 3 NTLELAKYILKHSNK---ELSNLELQKTLYFTELDYIKKFDKHLVSDDFEAWKYGPVARE 59
Query: 74 VYHRFKYFDSHPIE 87
VY+ ++ + ++ I+
Sbjct: 60 VYYEYRNYGANSID 73
>gi|194466406|ref|ZP_03072393.1| phage protein [Lactobacillus reuteri 100-23]
gi|194453442|gb|EDX42339.1| phage protein [Lactobacillus reuteri 100-23]
Length = 192
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 15/133 (11%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
PY+ + VANF +D K PI ++ + + +Y L K + E + W GPV
Sbjct: 26 PYNAMDVANFLVDFFNKKGTPITNIMLLKILYYLQA-FYLTHDKKLFVENIEKWGYGPVV 84
Query: 72 VGVYHRFKYFDSHPIE-------------VIMDLSFRIFPKIANQEIGEIMESIWNKYQS 118
VY FK + I +++D S R + ++I I I+ +Y +
Sbjct: 85 PVVYSYFKDNGAATITKTESYVVKNDDELLLLDPSMRKLDEADEKKISWIANKIFERYHN 144
Query: 119 HSTEQLQEIVQEE 131
+ E L E+ E
Sbjct: 145 NPFE-LVEVTHRE 156
>gi|167648674|ref|YP_001686337.1| hypothetical protein Caul_4719 [Caulobacter sp. K31]
gi|167351104|gb|ABZ73839.1| uncharacterized phage-associated protein-like protein [Caulobacter
sp. K31]
Length = 166
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/136 (19%), Positives = 57/136 (41%), Gaps = 14/136 (10%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
Y + +AN F+ + + + + +Q+ Y+ H + ++ ++ +AW GPV
Sbjct: 3 YRAVEIANEFL-RLPGAADRLTQMHLQKLTYIAHGWNWAINNEPLIADDIEAWSFGPVVR 61
Query: 73 GVYHRFKYFDSHPIEVIMDLS----FRIFPKIAN---------QEIGEIMESIWNKYQSH 119
+Y K+F + PI ++ R F K + +++E +W +Y
Sbjct: 62 DLYEHTKFFGTQPIGRLISPDDSQVARFFGKTGDAAPYRADLTDRERQVIEQVWARYSGL 121
Query: 120 STEQLQEIVQEENKTW 135
+ +L E+ + W
Sbjct: 122 NAIRLSELTHQPGTPW 137
>gi|317179695|dbj|BAJ57483.1| uncharacterized phage-associated protein [Helicobacter pylori
F30]
Length = 145
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+ + +A + + + K + +L++Q+ +Y T D + + K ++ ++ +AWK GPV
Sbjct: 3 NALELAKYILKRSNK---ELSNLELQKTLYFTELDYIKKFDKHLVSDDFEAWKYGPVARE 59
Query: 74 VYHRFKYFDSHPIE 87
VY+ ++ + ++ I+
Sbjct: 60 VYYEYRNYGANSID 73
>gi|228969638|ref|ZP_04130429.1| CDSE [Bacillus thuringiensis serovar sotto str. T04001]
gi|228790076|gb|EEM37867.1| CDSE [Bacillus thuringiensis serovar sotto str. T04001]
Length = 193
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 14 STIAVANFFI---DKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV 70
S VAN+F+ G SI LK+Q+ + + + + DE+ +AW GPV
Sbjct: 40 SIYDVANYFLYLSSPGTPRSI--TPLKLQKLTFYAQALNYAMEGEPLFDEDFEAWVHGPV 97
Query: 71 FVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
+Y+ +K + S I D S + PK+ ++++ +++ IW Y + + L+
Sbjct: 98 SPELYYEYKNYGSREI----DSSTIMKPKL-DKKVKNVIKIIWRMYGTKDGKYLENKTHN 152
Query: 131 ENKTWRR 137
E K W++
Sbjct: 153 E-KPWQQ 158
>gi|189183139|ref|YP_001936924.1| hypothetical protein OTT_0232 [Orientia tsutsugamushi str. Ikeda]
gi|189179910|dbj|BAG39690.1| hypothetical protein OTT_0232 [Orientia tsutsugamushi str. Ikeda]
Length = 148
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 5 TFTQTNPPYSTIAVANFF---IDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEE 61
T Q S VA++F +D+ + I LK+Q +Y + K + E+
Sbjct: 2 TIQQKGELLSCFDVASYFLVLVDR--EAGDIITQLKLQNLVYFAQGVHLALFDKPLFKED 59
Query: 62 PQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHST 121
+AW+ GPV + F F+++ I ++ F I+ + + E++ I++ Y H+
Sbjct: 60 IEAWENGPVVRHLRSIFGGFEANAIPAPGEIDFSIYTR----QQKEVIYKIYSSYGEHTA 115
Query: 122 EQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKM 158
L+++ + + P +R IT EE+ K
Sbjct: 116 SYLRDLTYLHSIWQEAIIRP-----SRVITKEEMRKF 147
>gi|71275398|ref|ZP_00651684.1| conserved hypothetical protein [Xylella fastidiosa Dixon]
gi|71898570|ref|ZP_00680741.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
gi|170730373|ref|YP_001775806.1| hypothetical protein Xfasm12_1233 [Xylella fastidiosa M12]
gi|71163698|gb|EAO13414.1| conserved hypothetical protein [Xylella fastidiosa Dixon]
gi|71731694|gb|EAO33754.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
gi|167965166|gb|ACA12176.1| conserved hypothetical protein [Xylella fastidiosa M12]
Length = 127
Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 58 LDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEI--GEIMESIWNK 115
+DE +AW+ GPV +Y+ K + S I + + + + + + ++ I+ S+W
Sbjct: 1 MDEPVEAWRAGPVIHSLYNAIKQYGSSGITERLPVRWFSWGRASKLDVTAAAILASVWAT 60
Query: 116 YQSHSTEQLQEIVQEENKTW 135
Y+ + +L I + E W
Sbjct: 61 YRRYGGVELAAITRAEGSPW 80
>gi|257438939|ref|ZP_05614694.1| putative prophage ps3 protein 01 [Faecalibacterium prausnitzii
A2-165]
gi|257198617|gb|EEU96901.1| putative prophage ps3 protein 01 [Faecalibacterium prausnitzii
A2-165]
Length = 340
Score = 39.3 bits (90), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 36 LKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFR 95
L +Q+ +Y + K + D +AW GPV+ VY+ F+ F +PI+ + +
Sbjct: 193 LTLQKLLYYIQGNYAAIYDKPLFDAPCEAWVHGPVYRNVYNLFRDFKYNPIDDDRFVPLK 252
Query: 96 IFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTW---RRLYDPND 143
E E+++ + + + +S + L+ I +E W RR + P++
Sbjct: 253 ESALPLTPEAKEVVDRVLDTFGMYSGKVLESITHKE-APWLDARRGFLPDE 302
>gi|224436575|ref|ZP_03657584.1| prophage ps3 protein01-like protein [Helicobacter cinaedi CCUG
18818]
gi|313143077|ref|ZP_07805270.1| prophage protein [Helicobacter cinaedi CCUG 18818]
gi|313128108|gb|EFR45725.1| prophage protein [Helicobacter cinaedi CCUG 18818]
Length = 175
Score = 39.3 bits (90), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 33 IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKY----FDSHPIEV 88
I +LK+Q+ +Y +L K + +E+ +AW GPV V++ K +
Sbjct: 30 ITNLKVQKLLYYAQAYSLLYYNKPLFNEKIEAWPHGPVVKEVFNEIKKEIGENGCRNLGD 89
Query: 89 IMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
I L+ F N + +I+ ++WNKY ++ +L+ + +E
Sbjct: 90 IWHLTKENFN--LNDDDMDILLNVWNKYGKYTASKLRNMTHDE 130
>gi|15837139|ref|NP_297827.1| hypothetical protein XF0537 [Xylella fastidiosa 9a5c]
gi|9105394|gb|AAF83347.1|AE003901_10 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 135
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 54 KKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIA--NQEIGEIMES 111
++ ++DE +AW+ GPV +Y+ K + S I + + + + + + I+ S
Sbjct: 5 RQPLIDEPVEAWRAGPVIRSLYNAIKQYGSSAITERLPVRWFSWGRALKIDATAAAILAS 64
Query: 112 IWNKYQSHSTEQLQEIVQEENKTW 135
+W Y+ + +L I + E W
Sbjct: 65 VWATYRRYGGVELAAITRAEGSPW 88
>gi|194246803|ref|YP_002004442.1| Uncharacterized phage-associated protein [Candidatus Phytoplasma
mali]
gi|193807160|emb|CAP18598.1| Uncharacterized phage-associated protein [Candidatus Phytoplasma
mali]
Length = 166
Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 12/129 (9%)
Query: 18 VANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQK--KKSMLDEEPQAWKQGPVFVGV 74
VAN+ I IP + +LKIQ+ I+ + +++ K M +AW GPVF +
Sbjct: 12 VANYIIANK---KIPDLTNLKIQKLIFYIYVVYLVKTNPKTKMFHSNIEAWPYGPVFPEL 68
Query: 75 YHRFKYFDSHPIEVIMDLSFRI-FPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
Y F + VI+D + FPK+ N +E I KY + +L + +E +
Sbjct: 69 YFALSKFHN----VIIDKPLVVDFPKVINHLPKSCIEYILQKYGNLKAYELTRQIHDE-E 123
Query: 134 TWRRLYDPN 142
W +Y N
Sbjct: 124 LWNDVYVDN 132
>gi|170718371|ref|YP_001783596.1| hypothetical protein HSM_0245 [Haemophilus somnus 2336]
gi|168826500|gb|ACA31871.1| conserved hypothetical protein [Haemophilus somnus 2336]
Length = 145
Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 13 YSTIAVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
YS + VAN FI K + +P + +K+Q+ ++ + + ++D+ W+ GPV
Sbjct: 3 YSAMQVANAFIQKAQEGKVPALTPMKLQKLMFFAQSWYLKKYHVRLIDDHFVRWQYGPVI 62
Query: 72 VGVYHRFKYFDS 83
VY+ F F S
Sbjct: 63 PSVYYEFSSFGS 74
>gi|148284657|ref|YP_001248747.1| hypothetical protein OTBS_1191 [Orientia tsutsugamushi str.
Boryong]
gi|146740096|emb|CAM80257.1| hypothetical protein OTBS_1191 [Orientia tsutsugamushi str.
Boryong]
Length = 129
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 9/128 (7%)
Query: 5 TFTQTNPPYSTIAVANFF---IDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEE 61
T Q S VA++F +D+ + I LK+Q+ +Y + + K + E+
Sbjct: 2 TVQQKGELLSCFDVASYFLVLVDR--EAGDVITQLKLQKLVYFSQGVHLALFDKPLFKED 59
Query: 62 PQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHST 121
+AW+ GPV + F F+++ I ++ F I+ NQ+ E++ I++ Y H+
Sbjct: 60 IEAWQNGPVVRHLRSIFGSFEANAIPGPGEIDFSIY---TNQQ-KELIYKIYSSYGEHTA 115
Query: 122 EQLQEIVQ 129
L+++
Sbjct: 116 SYLRDLTH 123
>gi|283783645|ref|YP_003374399.1| hypothetical protein HMPREF0424_1204 [Gardnerella vaginalis 409-05]
gi|283442150|gb|ADB14616.1| conserved domain protein [Gardnerella vaginalis 409-05]
Length = 153
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 23/148 (15%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVY-- 75
VA++ +D + I +K+Q+ Y + + + +E+ QAW+ GPV ++
Sbjct: 7 VASYILD----ITGTITTMKLQKLAYYSQAYSLAATGHPLFNEDFQAWRNGPVCPELFAL 62
Query: 76 HRFKYFDSHP------IEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
HR K+ E + D S KI ++E + K+ +S L +
Sbjct: 63 HRGKFLIRKGELVIPNTEKLQDNSLTDVQKI-------LVEKVCEKFAGYSGSDLSAMTH 115
Query: 130 EENKTWRRLYDPNDPNTNRTITVEEITK 157
E+ W+ YD + + I V++ITK
Sbjct: 116 SEDP-WKNAYDATN---SSAICVQKITK 139
>gi|300867705|ref|ZP_07112350.1| putative Phage-associated protein [Oscillatoria sp. PCC 6506]
gi|300334288|emb|CBN57522.1| putative Phage-associated protein [Oscillatoria sp. PCC 6506]
Length = 151
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 10/122 (8%)
Query: 14 STIAVANFF---IDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV 70
S + VA +F +D+ I LK+Q+ +Y ++ + + + E+ QAW GP
Sbjct: 3 SALDVARYFLYRVDRDA--GDTISPLKLQKLVYYAQAWSLVLRDQPLFYEDIQAWVHGPA 60
Query: 71 FVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
V+ +K + I + + E++E +WN Y S ++L+++
Sbjct: 61 IYEVWDTYKDYRYGAIPEPEEEL-----PEFEDDEIEVLEEVWNAYGELSAKRLEDLTHS 115
Query: 131 EN 132
E
Sbjct: 116 EE 117
>gi|322513457|ref|ZP_08066569.1| hypothetical protein HMPREF0027_0321 [Actinobacillus ureae ATCC
25976]
gi|322120748|gb|EFX92629.1| hypothetical protein HMPREF0027_0321 [Actinobacillus ureae ATCC
25976]
Length = 148
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 10/132 (7%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHL---KIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGP 69
YS + +AN FI K + + +L K+Q+ ++ + + + ++D+ W GP
Sbjct: 3 YSAMQIANAFIRKAQETPNELPNLTPMKLQKLMFFAQSWYIKKLRARLIDDNFMRWPYGP 62
Query: 70 VFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGE----IMESIWNKYQSHSTEQLQ 125
V +Y+ FK IEV S IF + ++ ++ I + Y L
Sbjct: 63 VIPSIYYEFKDNGGGNIEVP---SKNIFGTPFDSQLEARDEYFLDEIIHVYGGFDGWTLS 119
Query: 126 EIVQEENKTWRR 137
++ +E WR+
Sbjct: 120 DMTHQEGTAWRK 131
>gi|307152153|ref|YP_003887537.1| putative phage-associated protein [Cyanothece sp. PCC 7822]
gi|306982381|gb|ADN14262.1| putative phage-associated protein [Cyanothece sp. PCC 7822]
Length = 155
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
S +A FFI + + +LK+Q+ +Y + + +E+ +AW GPV
Sbjct: 3 SCYKIAQFFIRYAHEAGSLLTNLKLQKLVYYAQAWHLAIHGSPLFEEDFEAWVHGPVIPE 62
Query: 74 VYHRFKYFDSHPIEVIMD 91
+Y ++K + +PI +D
Sbjct: 63 LYQKYKQYKWNPISEDVD 80
>gi|256847418|ref|ZP_05552864.1| prophage ps3 protein 01 [Lactobacillus coleohominis 101-4-CHN]
gi|256716082|gb|EEU31057.1| prophage ps3 protein 01 [Lactobacillus coleohominis 101-4-CHN]
Length = 156
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 35 HLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSF 94
+K+ + +Y + K M D + AWK GPV V+ ++K + E I D
Sbjct: 30 QMKVMKLLYYIQAASLSITNKRMFDNDIVAWKYGPVVEAVHEKYKGYRGIVGE-ITDEDL 88
Query: 95 RIFPKI-ANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWR 136
R + K+ ++ I+ SI++ Y S L E K W+
Sbjct: 89 RDYSKLQSDATASSILNSIYDVYGYSSAYDLMRQTHRE-KPWK 130
>gi|160947087|ref|ZP_02094254.1| hypothetical protein PEPMIC_01018 [Parvimonas micra ATCC 33270]
gi|158446221|gb|EDP23216.1| hypothetical protein PEPMIC_01018 [Parvimonas micra ATCC 33270]
Length = 153
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 33 IDHLKIQQFIYLTHCDVVLQKK--KSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPI 86
I +L++Q+ +Y + V KK +++ DE + W+ GPV VY ++K F S PI
Sbjct: 34 ITNLQLQKVMYFSMKTVNADKKFLQNLYDEPFKVWRYGPVVKSVYDKYKIFVSSPI 89
>gi|166368019|ref|YP_001660292.1| putative prophage protein [Microcystis aeruginosa NIES-843]
gi|166090392|dbj|BAG05100.1| putative prophage protein [Microcystis aeruginosa NIES-843]
Length = 195
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/119 (20%), Positives = 52/119 (43%), Gaps = 6/119 (5%)
Query: 15 TIAVANFFIDKGVKYSIPID--HLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+ VA +FI + + + + ++K+Q+ +Y + + + EE QAW+ GPV
Sbjct: 4 CLTVARYFIIRAYEDGMDAEMTNMKVQKLLYYAQSLHLALYDEPLFKEEIQAWRYGPVCP 63
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
Y + F++ + + P E E++ IW + ++ +L ++ E
Sbjct: 64 AAYKFYSDFEAEQLPIPRQECLSGLP----SEKKELLAEIWQYFGNYHAYRLSDMTHAE 118
>gi|237704836|ref|ZP_04535317.1| phage-associated protein [Escherichia sp. 3_2_53FAA]
gi|226901202|gb|EEH87461.1| phage-associated protein [Escherichia sp. 3_2_53FAA]
gi|332344139|gb|AEE57473.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 147
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 14 STIAVANFFIDKGVKYSIPI-DHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+ VA++F+ + S I +LKIQ+ Y ++ K + +E+ +AW GPV
Sbjct: 3 TCFDVADYFLAHCDEESGDIISNLKIQKLTYYAQGFSLVLLGKPLFNEKIEAWMHGPVVP 62
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+Y +++ + + + + K + EI E+++ ++ Y S +L+ + EE
Sbjct: 63 ELYRKYRDCGNGALPAPENFDAK---KFSEDEI-ELLDEVYKVYGQFSAWKLRNMTHEE- 117
Query: 133 KTWRRLY 139
+ W+ Y
Sbjct: 118 QPWKDAY 124
>gi|257453083|ref|ZP_05618382.1| putative prophage protein (ps3) [Fusobacterium sp. 3_1_5R]
gi|317059620|ref|ZP_07924105.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
gi|313685296|gb|EFS22131.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
Length = 150
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 21/76 (27%)
Query: 63 QAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIG-------EIMESIWNK 115
+AW GPVF +Y F+Y + + K N +I + +E IWN
Sbjct: 57 EAWVHGPVFRDLYTDFRYNE--------------YTKTKNAQIENLDKDTLDFLERIWNV 102
Query: 116 YQSHSTEQLQEIVQEE 131
Y S S EQL+E+ E
Sbjct: 103 YGSFSGEQLEEMTHNE 118
>gi|210622827|ref|ZP_03293371.1| hypothetical protein CLOHIR_01319 [Clostridium hiranonis DSM 13275]
gi|210154044|gb|EEA85050.1| hypothetical protein CLOHIR_01319 [Clostridium hiranonis DSM 13275]
Length = 327
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 57 MLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKY 116
+ +E+ +AW GPV+ VY RFK + + IE +L +F + EI I++S+ +
Sbjct: 201 LFEEDCEAWIHGPVYKDVYDRFKDYRYNQIESEENLDELLFTSL---EIS-ILDSVIKNF 256
Query: 117 QSHSTEQLQEIVQEENKTW 135
+S + L+E E K W
Sbjct: 257 GCYSGKILEEFTHTE-KPW 274
>gi|154488282|ref|ZP_02029399.1| hypothetical protein BIFADO_01856 [Bifidobacterium adolescentis
L2-32]
gi|154083433|gb|EDN82478.1| hypothetical protein BIFADO_01856 [Bifidobacterium adolescentis
L2-32]
Length = 168
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 20/153 (13%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
++I VAN FI + I I +L + + +Y + + + K + +++ +AW GPV
Sbjct: 2 NSIQVANAFILRHGS-DIDITNLVLNKLVYFAQVESLRETGKPLFEDKIEAWSYGPVERD 60
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPK-----IANQEIGEIMESIWNKYQSHSTEQLQEIV 128
VY F+ + + I PK ++ +++ KY + L
Sbjct: 61 VYFTFQKYGRNRI-----------PKPEGETAKDERTLSVVDRTAKKYGFLTAFDLVGFS 109
Query: 129 QEENKTWRRLYDPNDPNTNRTITVEEITKMADG 161
+N W+ +Y + N IT ++I DG
Sbjct: 110 HRKNSAWKNVYRKGE---NVEITNDDILASDDG 139
>gi|315288228|gb|EFU47627.1| conserved hypothetical protein [Escherichia coli MS 110-3]
Length = 149
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 14 STIAVANFFIDKGVKYSIPI-DHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+ VA++F+ + S I +LKIQ+ Y ++ K + +E+ +AW GPV
Sbjct: 5 TCFDVADYFLAHCDEESGDIISNLKIQKLTYYAQGFSLVLLGKPLFNEKIEAWMHGPVVP 64
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+Y +++ + + + + K + EI E+++ ++ Y S +L+ + EE
Sbjct: 65 ELYRKYRDCGNGALPAPENFDAK---KFSEDEI-ELLDEVYKVYGQFSAWKLRNMTHEE- 119
Query: 133 KTWRRLY 139
+ W+ Y
Sbjct: 120 QPWKDAY 126
>gi|258513790|ref|YP_003190012.1| phage-associated protein [Desulfotomaculum acetoxidans DSM 771]
gi|257777495|gb|ACV61389.1| Putative phage-associated protein [Desulfotomaculum acetoxidans DSM
771]
Length = 334
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 57 MLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKY 116
+ E+ +AW GPV+ +Y+R+ + PIE + +F +++SI +
Sbjct: 206 LFTEDCEAWVHGPVYREIYNRYSSYRFDPIESNDEFDVSVFTDAEKA----VIDSIIQNF 261
Query: 117 QSHSTEQLQEIVQEEN---KTWRRLYDPNDPNTNRTITVE 153
+S + L+ E KT L P D ++NR I+ E
Sbjct: 262 CCYSGKILERFTHSEMPWIKTRGNL--PADTHSNRKISKE 299
>gi|217031865|ref|ZP_03437368.1| hypothetical protein HPB128_199g73 [Helicobacter pylori B128]
gi|298735512|ref|YP_003728033.1| hypothetical protein HPB8_12 [Helicobacter pylori B8]
gi|216946517|gb|EEC25119.1| hypothetical protein HPB128_199g73 [Helicobacter pylori B128]
gi|298354697|emb|CBI65569.1| conserved hypothetical protein [Helicobacter pylori B8]
Length = 145
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 35/55 (63%)
Query: 33 IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIE 87
+ +L++Q+ +Y T D + + K ++ ++ +AW+ G V VY+ ++ + ++PI+
Sbjct: 19 LSNLELQKTLYFTELDYIKKFDKHLVSDDFEAWRYGSVAREVYYEYRNYGANPID 73
>gi|258517004|ref|YP_003193226.1| prophage ps3 protein 01 [Desulfotomaculum acetoxidans DSM 771]
gi|257780709|gb|ACV64603.1| prophage ps3 protein 01 [Desulfotomaculum acetoxidans DSM 771]
Length = 163
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 6 FTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAW 65
Q NP + V + DKG + + HLK+Q+ IY + + +++++ +AW
Sbjct: 2 LKQINPIDLSRHVIKYVNDKGHE----VSHLKLQKLIYYVDAWHNVYFNQPLIEDQFEAW 57
Query: 66 KQGPVFVGVYHRFK----YFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHST 121
GPV +++ F+ +D PI+ + + F I I+++++ E++ + ++Y +
Sbjct: 58 MHGPVVRNIWNYFRDKSVLYD--PIK-LEEGYFDISEYISSEQL-ELINDVLDEYGDKTA 113
Query: 122 EQLQEIVQEENKTWRRL---YDPNDPNTNRTITVEEITKMADGSNISPEN 168
L+ + E + WRR Y P+D + +++ K GS + +N
Sbjct: 114 YYLECLTHSE-EPWRRARLGYAPSD--KCEAVIYKDLIKQFYGSMLYGKN 160
>gi|150016592|ref|YP_001308846.1| prophage ps3 protein 01, [Clostridium beijerinckii NCIMB 8052]
gi|149903057|gb|ABR33890.1| prophage ps3 protein 01, putative [Clostridium beijerinckii NCIMB
8052]
Length = 336
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 7/113 (6%)
Query: 23 IDKGVKYSI----PIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRF 78
ID +KY + L IQ+ +Y + M +E+ +AWK GP + +Y R+
Sbjct: 165 IDAVIKYLLIRCEDFTALSIQKLLYYVQAFHYVFTGNFMFEEDCEAWKDGPFYPSLYERY 224
Query: 79 KYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
+ F I D+ ++ N E I+ESI Y +S + L+E+ + E
Sbjct: 225 EQFGYEKIN--KDIMANDKLRLENFE-RNIVESIIKFYGCYSGKILKEMTKSE 274
>gi|254780025|ref|YP_003058132.1| hypothetical protein HELPY_1490 [Helicobacter pylori B38]
gi|254001938|emb|CAX30193.1| Conserved hypothetical protein [Helicobacter pylori B38]
Length = 118
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 42 IYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIE 87
+Y T D + + K ++ ++ +AWK GPV VY++++ + ++PI+
Sbjct: 1 MYFTELDYIKKFDKHLVSDDFEAWKYGPVAREVYYKYRNYGANPID 46
>gi|288802236|ref|ZP_06407676.1| putative prophage ps3 protein 01 [Prevotella melaninogenica D18]
gi|288335203|gb|EFC73638.1| putative prophage ps3 protein 01 [Prevotella melaninogenica D18]
Length = 178
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 22 FIDKGVKYSIPIDHLKIQQFIYLTHC--DVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFK 79
I+KG + + LK+Q+ +Y V+ + K++ + PQAW GPV+ +Y+ +K
Sbjct: 15 LINKG----LSVSPLKLQKILYYVQSWNMVIFGRNKTLFAQAPQAWVNGPVYPEIYYEYK 70
>gi|218280922|ref|ZP_03487532.1| hypothetical protein EUBIFOR_00090 [Eubacterium biforme DSM 3989]
gi|218217778|gb|EEC91316.1| hypothetical protein EUBIFOR_00090 [Eubacterium biforme DSM 3989]
Length = 177
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 19/122 (15%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLD------EEPQAWKQGPVF 71
VAN+F+ K + H KIQ+ Y +++LD E QAW GPV
Sbjct: 30 VANWFLLKE-----DMSHKKIQKLCYYAEA-----WSETLLDAPICKNNEFQAWIHGPVN 79
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFR--IFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
+ +++ +K + I + S +F K ++ ++ EI+ S+W+ Y ++S + L+
Sbjct: 80 LKLWNIYKDYGWSLIHLQCTKSEEDSLFSKFSDSQL-EILNSVWHSYGAYSADTLEAQTH 138
Query: 130 EE 131
E
Sbjct: 139 SE 140
>gi|229817872|ref|ZP_04448154.1| hypothetical protein BIFANG_03158 [Bifidobacterium angulatum DSM
20098]
gi|229784772|gb|EEP20886.1| hypothetical protein BIFANG_03158 [Bifidobacterium angulatum DSM
20098]
Length = 168
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 62/152 (40%), Gaps = 20/152 (13%)
Query: 15 TIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+I VAN FI + I I +L + + +Y + + + K + +++ +AW GPV V
Sbjct: 3 SIQVANAFILRHGS-DIDITNLVLNKLVYFAQVESLRETGKPLFEDKIEAWPYGPVEKNV 61
Query: 75 YHRFKYFDSHPI-----EVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
Y F+ + + I EV D + +++ KY + L
Sbjct: 62 YFAFQKYGRNRIPKPEGEVTKD-----------ERTLSVVDRTARKYGFLTAFDLVGFSH 110
Query: 130 EENKTWRRLYDPNDPNTNRTITVEEITKMADG 161
+N W+ +Y + N IT + I DG
Sbjct: 111 RKNSAWKNVYREGE---NVEITNDAILASDDG 139
>gi|306830690|ref|ZP_07463855.1| phage protein [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
gi|304427198|gb|EFM30305.1| phage protein [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
Length = 142
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 18/98 (18%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDE--------EP-QA 64
S +AN I +PI +L++Q+ +Y T L+ + LDE EP
Sbjct: 2 SMKELANHIIAVAHDNELPITNLQLQKILYFT-----LRNSRRYLDEDTLKETYNEPFLV 56
Query: 65 WKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIAN 102
W+ GPV Y+RF + S P I+D SF PK N
Sbjct: 57 WRYGPVVESQYNRFYSYGSSP---IID-SFNQIPKYEN 90
>gi|291560455|emb|CBL39255.1| Uncharacterized phage-associated protein [butyrate-producing
bacterium SSC/2]
Length = 338
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 33 IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDL 92
I +L +Q+ +Y L + ++ +E +AW+ GPVF +Y ++K F E+I+DL
Sbjct: 181 ITNLFLQKILYYIKAIGKLLVEYPIITDECEAWRFGPVFPNIYEKYKNFGKQ--EIILDL 238
Query: 93 SFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
+ +E ++ + + N + ++ L+++ E
Sbjct: 239 PVDYAKNLLTKEEKQVTDFVLNTFGIYNIWFLKDLTHME 277
>gi|306835838|ref|ZP_07468835.1| XRE family transcriptional regulator [Corynebacterium accolens ATCC
49726]
gi|304568312|gb|EFM43880.1| XRE family transcriptional regulator [Corynebacterium accolens ATCC
49726]
Length = 149
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 36 LKIQQFIYLTHCDVVLQKKK-SMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIE----VIM 90
LKIQ+ +Y + + +E +AW GPV V +Y K + PI+ +
Sbjct: 28 LKIQKLLYYAKGLYMRASGGVPLFNERMEAWAHGPVVVDIYRELKKYGKSPIDPDTFISD 87
Query: 91 DLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRR 137
D ++ + + + + + +WNKY +S L+ E+ W++
Sbjct: 88 DFNWDDY-----RPVEDTLIDVWNKYGPYSAWALRNKTHTES-PWKK 128
>gi|84390146|ref|ZP_00991408.1| Uncharacterized phage-associated protein [Vibrio splendidus 12B01]
gi|84376800|gb|EAP93675.1| Uncharacterized phage-associated protein [Vibrio splendidus 12B01]
Length = 155
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/132 (18%), Positives = 58/132 (43%), Gaps = 15/132 (11%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
YS + V+ + + +L++++ Y+ H + ++ ++ ++ AW+ GP+
Sbjct: 7 YSAVDVSLSLLKHAYEQGKCFSNLQLEKLTYVCHGLSLAHFQRPLVIDDVFAWRFGPLVP 66
Query: 73 GVYHRFKYFDSHPI----EVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIV 128
VY RFK + + I +V++D K ++G + + QL E+
Sbjct: 67 SVYFRFKSYGVNVITEQGDVVLDAESESIVKDVVSQLGHL-----------TGPQLMELT 115
Query: 129 QEENKTWRRLYD 140
+ W +++D
Sbjct: 116 HRDGSPWHQVWD 127
>gi|167768483|ref|ZP_02440536.1| hypothetical protein CLOSS21_03042 [Clostridium sp. SS2/1]
gi|167710007|gb|EDS20586.1| hypothetical protein CLOSS21_03042 [Clostridium sp. SS2/1]
Length = 357
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 33 IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDL 92
I +L +Q+ +Y L + ++ +E +AW+ GPVF +Y ++K F E+I+DL
Sbjct: 200 ITNLFLQKILYYIKAIGKLLVEYPIITDECEAWRFGPVFPNIYEKYKNFGKQ--EIILDL 257
Query: 93 SFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
+ +E ++ + + N + ++ L+++ E
Sbjct: 258 PVDYAKNLLTKEEKQVTDFVLNTFGIYNIWFLKDLTHME 296
>gi|110801844|ref|YP_697682.1| prophage ps3 protein 01 [Clostridium perfringens SM101]
gi|110682345|gb|ABG85715.1| putative prophage ps3 protein 01 [Clostridium perfringens SM101]
Length = 335
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 36 LKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIE 87
L +Q+ +Y KK M +E +AW GPVF +Y+++K + PI+
Sbjct: 185 LALQKILYYIQGFYYAFLKKFMFEENCEAWVHGPVFRNIYYKYKEYRFDPIK 236
>gi|293400463|ref|ZP_06644608.1| conserved hypothetical protein [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291305489|gb|EFE46733.1| conserved hypothetical protein [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 247
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Query: 31 IPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPI---- 86
+P LK+Q+ +YL + D +++ + +E+ A+K GP + ++K I
Sbjct: 107 VPCSKLKLQKLVYLCYADFLVKYDMKLFEEKIYAFKYGPFIKEIDGKYKTRGKERIKDEL 166
Query: 87 ------EVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYD 140
E+ L+ +F K + + + +I KY S L I + W R Y
Sbjct: 167 YEFTNSEIPPLLARMVFSKNGKEIVNSCLLTI-GKYADKSPANLINITHTKGGPWDRTYV 225
Query: 141 PN 142
N
Sbjct: 226 VN 227
>gi|242309858|ref|ZP_04809013.1| predicted protein [Helicobacter pullorum MIT 98-5489]
gi|239523859|gb|EEQ63725.1| predicted protein [Helicobacter pullorum MIT 98-5489]
Length = 134
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/74 (18%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+ + ++++ + VK + +L++Q+ +Y T + + K ++ ++ +AW+ GP+
Sbjct: 3 NALELSSYILKNSVK---GLSNLELQKILYFTELAYIKKFNKHLIIDDFEAWQYGPIIRS 59
Query: 74 VYHRFKYFDSHPIE 87
VY+ ++ + ++ I+
Sbjct: 60 VYYEYRNYGANSID 73
>gi|325270745|ref|ZP_08137336.1| putative phage-associated protein [Prevotella multiformis DSM
16608]
gi|324986861|gb|EGC18853.1| putative phage-associated protein [Prevotella multiformis DSM
16608]
Length = 153
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 12 PYSTIAVANFFIDKGVK-YSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV 70
P S++ AN + K +SI ++ ++ + +++ + + + + E P+AW GPV
Sbjct: 2 PLSSVDFANQLRNMAYKRHSINLNKTQVNKLLFMCYGFYLAFYNQRLFHEPPKAWPYGPV 61
Query: 71 FVGVYHRFKYFD 82
F VY ++ F+
Sbjct: 62 FPNVYKQYSLFE 73
>gi|172036018|ref|YP_001802519.1| hypothetical protein cce_1103 [Cyanothece sp. ATCC 51142]
gi|171697472|gb|ACB50453.1| unknown [Cyanothece sp. ATCC 51142]
Length = 196
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 16 IAVANFFI----DKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
+ +A +FI + G +Y + ++K+Q+ +Y + C + + + +E QAW+ GPV
Sbjct: 5 LEIAKYFIIRAYEDGREYQM--TNMKVQKLLYYSQCLHLALYDEPLFSQEIQAWRYGPVC 62
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIW 113
Y + F++ + + E E++E +W
Sbjct: 63 PPAYRFYSEFEAKQLPIPQQDKLETL----TPEKKELLEEVW 100
>gi|273809596|ref|YP_003344834.1| phage-associated protein [Aggregatibacter phage S1249]
gi|261410503|gb|ACX80334.1| phage-associated protein [Aggregatibacter phage S1249]
Length = 146
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 4/127 (3%)
Query: 12 PYSTIAVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV 70
YS + VAN FI K + IP + +K+Q+ ++ + ++++E W+ GPV
Sbjct: 2 AYSAMQVANAFIQKAQEGKIPALTPMKLQKLMFFAQSWYLRVHSCRLINDEFVRWQYGPV 61
Query: 71 FVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGE--IMESIWNKYQSHSTEQLQEIV 128
VY+ F I FR E + ++ + Y + S QL E+
Sbjct: 62 IQSVYYEFARNGGGIIRQFAK-DFRGEDVAYQLETTDDLFLDKVIATYGAFSGWQLSEMT 120
Query: 129 QEENKTW 135
+++ W
Sbjct: 121 HDKDGAW 127
>gi|27363593|ref|NP_759121.1| hypothetical protein VV1_0109 [Vibrio vulnificus CMCP6]
gi|27359709|gb|AAO08648.1| Uncharacterized phage-associated protein [Vibrio vulnificus
CMCP6]
Length = 191
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 32/63 (50%)
Query: 19 ANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRF 78
A + + + I + +LK+Q+ Y + Q ++ + DE+ +AW GPV +Y +
Sbjct: 8 AKALLQRASENGIQVSNLKLQKLAYYCQGYHLAQYEEPLFDEDLKAWDHGPVVRSLYEEY 67
Query: 79 KYF 81
+ +
Sbjct: 68 QTY 70
>gi|254227208|ref|ZP_04920709.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|125620267|gb|EAZ48700.1| conserved hypothetical protein [Vibrio cholerae V51]
Length = 105
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
YS + VA + + +L++Q+ Y+ H + ++ ++ ++ AWK GPV
Sbjct: 7 YSAVDVAWSLLKHAKEQGKCFSNLQLQKLTYVCHGLSLAHFQRPLVVDDVFAWKFGPVVP 66
Query: 73 GVYHRFKYFDSHPI----EVIMD 91
VY RFK + S+ I +V++D
Sbjct: 67 SVYFRFKSYGSNVITEQCDVVLD 89
>gi|257877357|ref|ZP_05657010.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
gi|257811523|gb|EEV40343.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
Length = 594
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 168 NVVEQIKKPVRFDSDSEFATLESQLVKG---FKSMPPQLTKEFQEAQVQIKKDSAIARSI 224
+ + Q+ +P+RF SDSE +T ++ L K F L +E + I A S
Sbjct: 222 DTINQVGEPIRFSSDSELSTADTFLKKNDDRFLIAKSTLPMSNKEDIITIYSADTNAYSN 281
Query: 225 QESNIMRFAYSNRSFWVTIVWI----TIIVAFLLTQIINSNVFAQLCESKYIATV 275
+N++R W TIV + T I+ FL + + +QL ++ Y A++
Sbjct: 282 LRANLIR--------WSTIVLVILITTFIIVFLFARFFTKRI-SQLQQAVYFASI 327
>gi|237709229|ref|ZP_04539710.1| phage-associated protein [Bacteroides sp. 9_1_42FAA]
gi|237726530|ref|ZP_04557011.1| phage-associated protein [Bacteroides sp. D4]
gi|256840936|ref|ZP_05546444.1| phage-associated protein [Parabacteroides sp. D13]
gi|270295253|ref|ZP_06201454.1| phage-associated protein [Bacteroides sp. D20]
gi|282877647|ref|ZP_06286462.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
gi|294776637|ref|ZP_06742106.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|299148741|ref|ZP_07041803.1| toxin-antitoxin system, antitoxin component, Xre family
[Bacteroides sp. 3_1_23]
gi|301309629|ref|ZP_07215570.1| toxin-antitoxin system, antitoxin component, Xre family
[Bacteroides sp. 20_3]
gi|317475394|ref|ZP_07934658.1| hypothetical protein HMPREF1016_01640 [Bacteroides eggerthii
1_2_48FAA]
gi|325299634|ref|YP_004259551.1| phage-associated protein [Bacteroides salanitronis DSM 18170]
gi|229435056|gb|EEO45133.1| phage-associated protein [Bacteroides dorei 5_1_36/D4]
gi|229456925|gb|EEO62646.1| phage-associated protein [Bacteroides sp. 9_1_42FAA]
gi|256738208|gb|EEU51534.1| phage-associated protein [Parabacteroides sp. D13]
gi|270274500|gb|EFA20361.1| phage-associated protein [Bacteroides sp. D20]
gi|281300219|gb|EFA92573.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
gi|294449552|gb|EFG18083.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|298513502|gb|EFI37389.1| toxin-antitoxin system, antitoxin component, Xre family
[Bacteroides sp. 3_1_23]
gi|300832373|gb|EFK63002.1| toxin-antitoxin system, antitoxin component, Xre family
[Bacteroides sp. 20_3]
gi|316908422|gb|EFV30112.1| hypothetical protein HMPREF1016_01640 [Bacteroides eggerthii
1_2_48FAA]
gi|324319187|gb|ADY37078.1| phage-associated protein [Bacteroides salanitronis DSM 18170]
Length = 159
Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 35 HLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRF---KYFDSHPIEVIMD 91
+LK+Q+ +Y KK M D E +AW GPV +Y+RF KY S E+ +D
Sbjct: 26 NLKLQKLLYYVQAWSYGINKKPMFDGEFEAWIHGPVNREIYNRFNSTKYLYS---EINID 82
Query: 92 LSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
+++++ E ++ I Y +S +L+ + E
Sbjct: 83 DCMNHNVSLSSED-AEFIDFILENYLKYSGAELERLSHNE 121
>gi|254569824|ref|XP_002492022.1| hypothetical protein [Pichia pastoris GS115]
gi|238031819|emb|CAY69742.1| Hypothetical protein PAS_chr2-2_0178 [Pichia pastoris GS115]
gi|328351485|emb|CCA37884.1| Protein ERGIC-53-like [Pichia pastoris CBS 7435]
Length = 445
Score = 36.6 bits (83), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 155 ITKMADGSNI-SPENVVEQIKKPVRFDSDSEFATLESQLVKGFKSMPPQLTKEFQEAQVQ 213
++ ++D SNI + E + E ++ + A + + K P+ ++ + AQ
Sbjct: 318 LSSISDLSNILNDEYIDEYVQNESENEVKERIAKQRHRRLTKDKRPEPEASERRKTAQRL 377
Query: 214 IKKDSAIARSIQESNIMRFAYSNR------SFWVTIVWITIIVAFLLTQIINSNVFAQL 266
K + + R +E+N+ ++ Y +R + W+ + W II++FLL I N +L
Sbjct: 378 RKAEERLRRQHRENNLNKYGYESRLTYFLQTVWLLLKWTFIIISFLLVGFILYNRIRKL 436
>gi|326470293|gb|EGD94302.1| hypothetical protein TESG_01821 [Trichophyton tonsurans CBS 112818]
Length = 617
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 145 NTNRTITVEEITKMADGSNISPENV--VEQIKKP----VRFDSDSEFATLESQLVKGFKS 198
T+R V T A G P+NV + IK P ++ A + + +K F +
Sbjct: 44 GTSRPCLVGSPTNFAVGFPAEPQNVPTSDSIKSPQSPTEEWEGSGTIAYITDKSIKKFLN 103
Query: 199 MPPQLTKEFQEAQVQIKKDSAIARSIQESN 228
+PP++ + Q A Q+ + IAR E++
Sbjct: 104 LPPEVHQRLQLASAQLAAEHMIARGAAEAD 133
>gi|307565079|ref|ZP_07627592.1| putative K+-dependent Na+/Ca+ exchanger [Prevotella amnii CRIS
21A-A]
gi|307346248|gb|EFN91572.1| putative K+-dependent Na+/Ca+ exchanger [Prevotella amnii CRIS
21A-A]
Length = 321
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 203 LTKEFQEAQVQIKKDSAIARSIQESNIMRFAYSNRSFWVTIVWITIIVAFLLTQIINSNV 262
+ K QEA+ +K D A ++SI NI+ ++ WV+++W I+ LL I+ SN+
Sbjct: 140 MIKTLQEAKSDVKIDKANSKSIISENIIS-EKQHKKIWVSVIW---IIVGLLCLILGSNL 195
Query: 263 FAQ 265
F
Sbjct: 196 FVS 198
>gi|153873089|ref|ZP_02001787.1| phage-associated protein [Beggiatoa sp. PS]
gi|152070447|gb|EDN68215.1| phage-associated protein [Beggiatoa sp. PS]
Length = 158
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%)
Query: 32 PIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFK 79
P+ +K+Q+ +Y + ++ +K + DE+ +AW GPV +Y+ K
Sbjct: 31 PMSAMKLQKLVYYSQAWSLVWDEKPLFDEQIEAWTNGPVVRELYNEHK 78
>gi|225351691|ref|ZP_03742714.1| hypothetical protein BIFPSEUDO_03288 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225158035|gb|EEG71318.1| hypothetical protein BIFPSEUDO_03288 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 168
Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 63/150 (42%), Gaps = 16/150 (10%)
Query: 15 TIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+I VAN FI + I I +L + + +Y + + K + +++ +AW GPV V
Sbjct: 3 SIQVANAFILRHGS-DIDITNLVLNKLVYFAQVESLRATGKPLFEDKIEAWPYGPVERNV 61
Query: 75 YHRFKYFDSHPIEVIMDLSFRIFPK---IANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
Y F+ + + I + P+ +++ +++ KY + L +
Sbjct: 62 YFTFQKYGRNRI---------LKPEGETAKDEQALSVVDGTAKKYGFLTAFDLVRFSHRK 112
Query: 132 NKTWRRLYDPNDPNTNRTITVEEITKMADG 161
N W+ +Y + N IT + I DG
Sbjct: 113 NSAWKNVYREEE---NVEITNDAILASDDG 139
>gi|212716276|ref|ZP_03324404.1| hypothetical protein BIFCAT_01192 [Bifidobacterium catenulatum DSM
16992]
gi|212660788|gb|EEB21363.1| hypothetical protein BIFCAT_01192 [Bifidobacterium catenulatum DSM
16992]
Length = 168
Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 63/150 (42%), Gaps = 16/150 (10%)
Query: 15 TIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+I VAN FI + I I +L + + +Y + + K + +++ +AW GPV V
Sbjct: 3 SIQVANAFILRHGS-DIDITNLVLNKLVYFAQVESLRATGKPLFEDKIEAWPYGPVERNV 61
Query: 75 YHRFKYFDSHPIEVIMDLSFRIFPK---IANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
Y F+ + + I + P+ +++ +++ KY + L +
Sbjct: 62 YFTFQKYGRNRI---------LKPEGETAKDEQALSVVDGTAKKYGFLTAFDLVGFSHRK 112
Query: 132 NKTWRRLYDPNDPNTNRTITVEEITKMADG 161
N W+ +Y + N IT + I DG
Sbjct: 113 NSAWKNVYREGE---NVEITNDAILASDDG 139
>gi|227543484|ref|ZP_03973533.1| prophage ps3 protein 01 [Lactobacillus reuteri CF48-3A]
gi|300910156|ref|ZP_07127616.1| XRE family transcriptional regulator [Lactobacillus reuteri SD2112]
gi|77745371|gb|ABB02586.1| uncharacterized phage-associated protein [Lactobacillus reuteri]
gi|227186508|gb|EEI66579.1| prophage ps3 protein 01 [Lactobacillus reuteri CF48-3A]
gi|300892804|gb|EFK86164.1| XRE family transcriptional regulator [Lactobacillus reuteri SD2112]
Length = 159
Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 20/144 (13%)
Query: 33 IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDL 92
+ +K+ + +Y + K M D + AWK GPV V+ ++ I++
Sbjct: 28 LSQMKVMKLLYYIQAASLSISGKRMFDNDIVAWKYGPVVEAVHRKYS-----GCRGIVNS 82
Query: 93 SFRIFPKI--------ANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPNDP 144
++ I P+ A+++ I+ SI++ Y S L E K W++ P+
Sbjct: 83 NYPITPQDLEDYKELQADEQASSILNSIYDVYGYSSAYDLMRQTHSE-KPWQQT--PH-- 137
Query: 145 NTNRTITVEEITKMADGSNISPEN 168
NR I + I G IS EN
Sbjct: 138 --NRVIKDKYIKDFYSGVFISDEN 159
>gi|256846086|ref|ZP_05551544.1| gp27 [Fusobacterium sp. 3_1_36A2]
gi|256719645|gb|EEU33200.1| gp27 [Fusobacterium sp. 3_1_36A2]
Length = 161
Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 33 IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
ID +K+Q+ +Y + + + K + +EE + WK GP+ GV
Sbjct: 23 IDEMKLQKLLYFSQRETLAILNKPLFNEEFEGWKYGPISRGV 64
>gi|262275918|ref|ZP_06053727.1| periplasmic sensor signal transduction histidine kinase [Grimontia
hollisae CIP 101886]
gi|262219726|gb|EEY71042.1| periplasmic sensor signal transduction histidine kinase [Grimontia
hollisae CIP 101886]
Length = 666
Score = 35.8 bits (81), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 149 TITVEEITKMADGSNISPENVVEQIKKPVRFDSDSEFATLESQLVKG-FKSMPPQLTKEF 207
T+TV +I + + P+N + Q K + D ++ E+QL+ G +S+ Q F
Sbjct: 251 TVTVRQIATQVEALTLGPKNPISQSLKRLELDENNRTLLTENQLLIGSVRSIIDQAVS-F 309
Query: 208 QEAQVQIKKDSAIARSIQESNIMRFAYSNRSFWVTIVWITIIV-AFLLTQIIN--SNVF 263
E Q + I Q SN ++F V IV +T+ V A+L +Q++N SNV
Sbjct: 310 AEQQSSETSQALIDVIEQSSNQLKFT------LVGIVILTLFVGAYLRSQLLNRLSNVL 362
Searching..................................................done
Results from round 2
>gi|254781013|ref|YP_003065426.1| phage-associated protein [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040690|gb|ACT57486.1| phage-associated protein [Candidatus Liberibacter asiaticus str.
psy62]
Length = 302
Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats.
Identities = 302/302 (100%), Positives = 302/302 (100%)
Query: 1 MKKRTFTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDE 60
MKKRTFTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDE
Sbjct: 1 MKKRTFTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDE 60
Query: 61 EPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHS 120
EPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHS
Sbjct: 61 EPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHS 120
Query: 121 TEQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKMADGSNISPENVVEQIKKPVRFD 180
TEQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKMADGSNISPENVVEQIKKPVRFD
Sbjct: 121 TEQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKMADGSNISPENVVEQIKKPVRFD 180
Query: 181 SDSEFATLESQLVKGFKSMPPQLTKEFQEAQVQIKKDSAIARSIQESNIMRFAYSNRSFW 240
SDSEFATLESQLVKGFKSMPPQLTKEFQEAQVQIKKDSAIARSIQESNIMRFAYSNRSFW
Sbjct: 181 SDSEFATLESQLVKGFKSMPPQLTKEFQEAQVQIKKDSAIARSIQESNIMRFAYSNRSFW 240
Query: 241 VTIVWITIIVAFLLTQIINSNVFAQLCESKYIATVVSLSAIICGFWAIVGKGLFGVHNDT 300
VTIVWITIIVAFLLTQIINSNVFAQLCESKYIATVVSLSAIICGFWAIVGKGLFGVHNDT
Sbjct: 241 VTIVWITIIVAFLLTQIINSNVFAQLCESKYIATVVSLSAIICGFWAIVGKGLFGVHNDT 300
Query: 301 QP 302
QP
Sbjct: 301 QP 302
>gi|330874252|gb|EGH08401.1| phage-associated protein [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
Length = 196
Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+S ++AN+F++ I +K+Q+ +Y H + +++E +AW+ GPV
Sbjct: 33 FSAKSIANYFLELAAASGQSISPMKLQKLVYYAHGWYSGYTDRPLINEPVEAWQYGPVIP 92
Query: 73 GVYHRFKYFDSHPIEVIM----DLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIV 128
+YH FK F S I+ L R ++ + +++++N Y +S +L E+
Sbjct: 93 SLYHEFKRFGSGDIQCKAFDYDALGVREAATPSDPNVRTFLQNVFNSYGKYSGIRLSEMT 152
Query: 129 QEENKTWRRLYDP 141
W +
Sbjct: 153 HASGTPWDTTWSK 165
>gi|330970699|gb|EGH70765.1| phage-associated protein [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 165
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+S ++AN+F++ I +K+Q+ +Y H + +++E +AW+ GPV
Sbjct: 2 FSAKSIANYFLELAAASGQSISPMKLQKLVYYAHGWYSGYTDRPLINEPVEAWQYGPVIP 61
Query: 73 GVYHRFKYFDSHPIEVIM----DLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIV 128
+YH FK F S I+ L R ++ + +++++N Y +S +L E+
Sbjct: 62 SLYHEFKRFGSGDIQCKAFDYDALGVREAATPSDPNVRTFLQNVFNSYGKYSGIRLSEMT 121
Query: 129 QEENKTWRRLYDP 141
W +
Sbjct: 122 HASGTPWDTTWSK 134
>gi|294502072|ref|YP_003566137.1| phage-associated protein [Salinibacter ruber M8]
gi|294342056|emb|CBH22721.1| phage-associated protein [Salinibacter ruber M8]
Length = 170
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 8 QTNPPYSTIAVANFFIDKGVKYSI--PIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAW 65
++PPY +AVANFFID V+ P+ LK+Q+ +Y+ H + + ++ E +AW
Sbjct: 1 MSSPPYPAVAVANFFIDTAVEDPDVGPVTQLKLQKLVYIAHGWHLAIYDEHLIKEPVEAW 60
Query: 66 KQGPVFVGVYHRFKYFDSHPIEVIMD-LSFRIFPKI-----ANQEIGEIMESIWNKYQSH 119
+ GPV +Y R + S PI +D S R P++ +++ + S+W Y+ +
Sbjct: 61 EFGPVVRDLYSRAGDYGSDPISDRLDGTSSRSAPELLEIPSSDERTRNFLRSVWQTYREY 120
Query: 120 STEQLQEIVQEENKTWRRLYDPNDPNTNRT 149
S +L I +E+ W ++ N+T
Sbjct: 121 SAVELTSITHKEDTPWYDTWERRGGKENKT 150
>gi|90022360|ref|YP_528187.1| phage-associated protein-like protein [Saccharophagus degradans
2-40]
gi|89951960|gb|ABD81975.1| Uncharacterized phage-associated protein-like protein
[Saccharophagus degradans 2-40]
Length = 159
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 10/158 (6%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+S I VA F+ K + +++Q+ +Y+ H + ++ ++ AWK GPV
Sbjct: 4 HSAIDVAYKFLQKAASEGGSLTPMQLQKLVYIAHGCSLGWCDAPLIKDDVYAWKFGPVIE 63
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIA--NQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
+YH FK F + ++ + D + A + EI++++WN Y+ +S QL ++ +
Sbjct: 64 DLYHCFKRFRADEVQ-VTDKQIEAMVEAAGFSDAEDEIIDAVWNNYKHYSGPQLSDLTHQ 122
Query: 131 ENKTWRRLYDPNDPN------TNRTITVEEITKMADGS 162
W + + D + NRTI E M G+
Sbjct: 123 PGTPWYQTWRHGDSSYAGAVIDNRTIA-EHYKHMLAGA 159
>gi|146302603|ref|YP_001197194.1| phage-associated protein [Flavobacterium johnsoniae UW101]
gi|146157021|gb|ABQ07875.1| Uncharacterized phage-associated protein [Flavobacterium johnsoniae
UW101]
Length = 149
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 8/146 (5%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
Y+ +A +FI+ + +D +K+ + Y++H + K + D E QAWK G V
Sbjct: 2 YNCFDIAKYFIELAEEEGQGLDPMKLLKLTYISHGWHLGITGKPLFDNEVQAWKYGSVIP 61
Query: 73 GVYHRFKYFDSHPIE-VIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
+Y+ + F P++ ++++S + K QE E ++ IWN Y+ S QL + EE
Sbjct: 62 DLYYEIRMFGKDPVDPFLINISAKTPLK---QEDKEFLKKIWNNYKGLSGLQLSALTHEE 118
Query: 132 NKTWRRLYDPNDPNTNRTITVEEITK 157
W + +D T+ I +I K
Sbjct: 119 GSPWSQTWD----GTHNVIIGNDIIK 140
>gi|121608301|ref|YP_996108.1| hypothetical protein Veis_1323 [Verminephrobacter eiseniae EF01-2]
gi|121552941|gb|ABM57090.1| conserved hypothetical protein [Verminephrobacter eiseniae EF01-2]
Length = 161
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 8 QTNPPYSTIAVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWK 66
+P YS A+AN F+ K + +IP + +K+Q+ +Y T + + +LD+ WK
Sbjct: 1 MAHPEYSAFAIANAFVQKAGQGAIPNLTPMKLQKLLYFTQAWHLKVRGFPLLDDHFARWK 60
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIM--------DLSFRIFP-KIANQEIGEIMESIWNKYQ 117
GPV VYH F+ + PI D + +I +A+++ ++++I ++Y
Sbjct: 61 HGPVIPAVYHEFRAYGHRPITRKATTLAMSDDDYAVKIPMVPLADRDTWGLIDAIIDRYG 120
Query: 118 SHSTEQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEI 155
+ ++L + E W IT E+I
Sbjct: 121 AVDAQELSRMTHLEGSAWAT----GGGADGTVITAEQI 154
>gi|251791488|ref|YP_003006209.1| hypothetical protein Dd1591_3930 [Dickeya zeae Ech1591]
gi|247540109|gb|ACT08730.1| conserved hypothetical protein [Dickeya zeae Ech1591]
Length = 174
Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 18/165 (10%)
Query: 13 YSTIAVANFFIDKGVKYSI-PIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
YS I+VAN I+K I + +K+Q+ +Y H ++ ++ +++E +AWK GPV
Sbjct: 3 YSAISVANSLIEKAKNRGITDLTPMKLQKLVYFAHAWMLAIDERPLINETVKAWKFGPVI 62
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPK----------------IANQEIGEIMESIWNK 115
VYH FK + + I+ I + ++ +M++I +
Sbjct: 63 DSVYHEFKAYGAKNIDSFGTEFDLIDAEDNGGVPDVGFITPYVDSSDTRAHSVMDAILDT 122
Query: 116 YQSHSTEQLQEIVQEENKTWRRLYDPNDPNTNRTITVE-EITKMA 159
Y S L + + W + + R ++ EI K A
Sbjct: 123 YGDKSATFLSNLTHAPDSAWSITKSDHHDGSRRGFVIDNEIIKSA 167
>gi|322433755|ref|YP_004215967.1| phage-associated protein-like protein [Acidobacterium sp. MP5ACTX9]
gi|321161482|gb|ADW67187.1| phage-associated protein-like protein [Acidobacterium sp. MP5ACTX9]
Length = 161
Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
P+ AVAN +D+ + + + IQ+ +Y H + ++ + +AW+ GPV
Sbjct: 2 PFPATAVANELLDRASAEGLSLTQINIQKLVYFAHGWNLGWSANPLILDPIEAWQYGPVV 61
Query: 72 VGVYHRFKYFDSHPI-----EVIMDLSFRI---FPKIANQEIGEIMESIWNKYQSHSTEQ 123
+Y++F+ F S PI E +D + +I P + + ++ ++WN+Y +
Sbjct: 62 RNLYNQFRRFGSSPITGKAVEFRIDSNGKIGTTCPTLEDAYSKSVVGAVWNQYGRLQPFK 121
Query: 124 LQEIVQEENKTWRRLYDPNDP-NTNRTI 150
L E+ W ++ N I
Sbjct: 122 LVELTHAPGSPWEAAWNAKKALIENEDI 149
>gi|238764937|ref|ZP_04625876.1| hypothetical protein ykris0001_360 [Yersinia kristensenii ATCC
33638]
gi|238696878|gb|EEP89656.1| hypothetical protein ykris0001_360 [Yersinia kristensenii ATCC
33638]
Length = 156
Score = 162 bits (409), Expect = 8e-38, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 11/151 (7%)
Query: 13 YSTIAVANFFIDKGVKYSI-PIDHLKIQQFIYLTHCDVVLQKK-KSMLDEEPQAWKQGPV 70
YS +AVAN FI+K +K + + +K+Q+ ++ T + + + D+ WK GPV
Sbjct: 3 YSAVAVANAFIEKALKGELKELTPMKLQKLLFYTQSWHLKLRGGTPLFDDLFARWKFGPV 62
Query: 71 FVGVYHRFKYFDSHPIEVIM------DLSF-RIFPKIA--NQEIGEIMESIWNKYQSHST 121
+Y K + ++ I+ + D F RI P I ++E ++++ I Y +S
Sbjct: 63 IPTLYRLLKKYGANEIDSKISFIQESDGDFERITPSIQKDDEETRKLVDKIIEVYGEYSG 122
Query: 122 EQLQEIVQEENKTWRRLYDPNDPNTNRTITV 152
+L + N W + P +++ +
Sbjct: 123 PELSSMTHAPNTAWSKGATDGGPISHKDMAE 153
>gi|119383205|ref|YP_914261.1| hypothetical protein Pden_0451 [Paracoccus denitrificans PD1222]
gi|119372972|gb|ABL68565.1| conserved hypothetical protein [Paracoccus denitrificans PD1222]
Length = 183
Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 10 NPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGP 69
+ PY A+AN +D+ + I +L +Q+ +Y H + + K+ ++ +AW+ GP
Sbjct: 2 SGPYDPRAIANLMLDEADRRGWKITNLALQKLLYFAHGIHLTKTKRPLVSGYFEAWQYGP 61
Query: 70 VFVGVYHRFKYFDSHPI------EVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQ 123
V VY FK S PI + + R PK + E+ +++ + Y +
Sbjct: 62 VHPAVYRAFKPSGSAPIINRAAAKDPLTGKTRDLPKPTDLEVIDLVSDVMRSYGHLPPGR 121
Query: 124 LQEIVQEENKTWRRLYDP 141
L ++ ++ W + D
Sbjct: 122 LVDLSHAKDSPWSVVVDK 139
>gi|239502391|ref|ZP_04661701.1| phage-associated protein [Acinetobacter baumannii AB900]
Length = 149
Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 10/145 (6%)
Query: 14 STIAVANFFI--DKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
+ VAN+ + + + S I LK+Q+ +Y + K + E +AW GPV
Sbjct: 4 KALDVANYILWLENRFEGSEGITPLKLQKLVYYCQGFHLAMFDKELFPESIEAWLHGPVV 63
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
VYH FK + + D + I + E+++ + Y S +L+ + EE
Sbjct: 64 PSVYHHFKAAGNDIVTPPKDFNIEILSEAQ----RELLDEVIESYGQFSAWRLRNMTHEE 119
Query: 132 NKTWRRLYDPNDPNTNRTITVEEIT 156
W+ Y +P N I+++++
Sbjct: 120 -APWKNAY---EPGCNNEISIKDMK 140
>gi|117676333|ref|YP_863932.1| hypothetical protein BPSphi5223_0049 [Burkholderia phage phi52237]
gi|117670160|gb|ABK56726.1| conserved hypothetical protein [Burkholderia phage phi52237]
Length = 157
Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 4/143 (2%)
Query: 14 STIAVANFFIDKGVKYSIP--IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
S + +A I + S P +L IQ+ Y H + + +++E +AW+ GPV
Sbjct: 4 SALQLAAELIRRSDAQSRPQFTTNLAIQKLAYFCHGWHLALSGEPLVNEPFEAWRFGPVL 63
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
G+YH K F S+PI L A G++++ + N Y ST QL I
Sbjct: 64 PGLYHTLKVFSSNPIPANHPLVISQASLPAGSWSGQLIDHVLNVYGGLSTTQLVSISHAS 123
Query: 132 NKTWRRLYD--PNDPNTNRTITV 152
+ W++++ P+ TN +I
Sbjct: 124 DGPWQQVWSQGPSSWITNESIAT 146
>gi|149204320|ref|ZP_01881287.1| hypothetical protein RTM1035_18245 [Roseovarius sp. TM1035]
gi|149142205|gb|EDM30252.1| hypothetical protein RTM1035_18245 [Roseovarius sp. TM1035]
Length = 182
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 6/135 (4%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
Y +AN +D+ K I +L +Q+ +Y H + + K+ ++ +AW+ GPV
Sbjct: 4 YDPRTIANLMLDEADKRGWKITNLALQKLLYFAHGIHLTRNKRPLVSGYFEAWQYGPVHP 63
Query: 73 GVYHRFKYFDSHPI------EVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQE 126
VY FK + PI + + R PK + EI +++ + Y +L +
Sbjct: 64 AVYRAFKPSGAAPIVNRAVAKDPLTCKTRELPKPTDVEIIDLVSDVMRSYGHLPPGRLVD 123
Query: 127 IVQEENKTWRRLYDP 141
+ ++ W + D
Sbjct: 124 LSHAKDSPWSVIVDK 138
>gi|187736496|ref|YP_001878608.1| Uncharacterized phage-associated protein-like protein [Akkermansia
muciniphila ATCC BAA-835]
gi|187426548|gb|ACD05827.1| Uncharacterized phage-associated protein-like protein [Akkermansia
muciniphila ATCC BAA-835]
Length = 161
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 6/164 (3%)
Query: 1 MKKRTFTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDE 60
M+ F+ N +T + N+FI + + + +K+ + L + + +++E
Sbjct: 1 MEATHFSMANST-TTQKLCNWFIQQANAKELILTPVKLNHLVILADWWHLHRTGAFLINE 59
Query: 61 EPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHS 120
+AW GPV +YH +K D P I S R P +I +E IWN Y ++
Sbjct: 60 RVEAWPSGPVLPSIYHEYK--DQPPYSSIEHPSRRQPPLEEETDIIPFLEHIWNVYGKYT 117
Query: 121 TEQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEIT---KMADG 161
+QL I + W++ ++ + IT E + K G
Sbjct: 118 AQQLGRINTAPSSPWKQSQGKHEQAHRQQITEEHVQAYFKSLAG 161
>gi|229588705|ref|YP_002870824.1| hypothetical protein PFLU1166 [Pseudomonas fluorescens SBW25]
gi|229360571|emb|CAY47428.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 164
Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 10/133 (7%)
Query: 13 YSTIAVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
YS +AVAN FI++ + + + +K+Q+ ++ T + +++ ++D+ W+ GPV
Sbjct: 5 YSALAVANAFIERAKEGKLSGLTPMKLQKLLFYTQSWHLRERELPLMDDHFARWQYGPVI 64
Query: 72 VGVYHRFKYFDSHPIEVIM-----DLSFRIFPKI----ANQEIGEIMESIWNKYQSHSTE 122
+YH K + S P+ ++ D+ +F ++ +++ I NKY S
Sbjct: 65 PSLYHELKSYGSRPVTSLLSNLKPDVEDIVFVTPRIPESDTYAQRLIDRIINKYGKWSGT 124
Query: 123 QLQEIVQEENKTW 135
QL + EE W
Sbjct: 125 QLSNLSHEEGTAW 137
>gi|307947548|ref|ZP_07662879.1| cdse [Roseibium sp. TrichSKD4]
gi|307769254|gb|EFO28484.1| cdse [Roseibium sp. TrichSKD4]
Length = 169
Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 8/155 (5%)
Query: 13 YSTIAVANFFIDKGVKYSI-PIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
Y VAN F+ + + I +D LK+Q+ +Y H + + + E +AW GPV
Sbjct: 11 YKPSWVANTFLVRAREDRISDVDPLKLQKLMYCLHGWNLAVRGHPAVGERFEAWPHGPVL 70
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIA-------NQEIGEIMESIWNKYQSHSTEQL 124
+YH+FK + I + + + A ++ E+ + +W++Y+ S +L
Sbjct: 71 SSIYHQFKSYGGFRIHGLAEEIDPTTGEKATLIVAKSDENFYEVFDRVWDRYKKFSGLKL 130
Query: 125 QEIVQEENKTWRRLYDPNDPNTNRTITVEEITKMA 159
E+ + N W + + +++
Sbjct: 131 SEMTHQPNTPWSYARKNGLQYISDQMIRNHFIELS 165
>gi|260910168|ref|ZP_05916845.1| phage protein [Prevotella sp. oral taxon 472 str. F0295]
gi|260635672|gb|EEX53685.1| phage protein [Prevotella sp. oral taxon 472 str. F0295]
Length = 174
Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 81/156 (51%), Gaps = 15/156 (9%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLD---EEPQAWKQGPV 70
+ ++VAN+FI+ + + LK+ + +Y+ + + +S++D ++ +AW+ GPV
Sbjct: 4 NALSVANYFIELAKNDKVDVRPLKLMKLVYMAYGYALAIIDRSIIDPRFDKVEAWRYGPV 63
Query: 71 FVGVYHRFKYFDSHPI---EVIMDLSFR-----IFPKIANQEIGEIMESIWNKYQSHSTE 122
VYH FK + ++P+ V+M+ S + + PK+ ++ ++ + +W +Y+ HS
Sbjct: 64 IPSVYHSFKQYRNNPVTEKTVVMEPSDKYEVKFVEPKLEDKSARKVCDFVWKRYRDHSDS 123
Query: 123 QLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKM 158
L ++ E W ++Y T E +TK+
Sbjct: 124 GLVSLLHGEATPWAQVYREGQNCT----IPEVMTKI 155
>gi|260914611|ref|ZP_05921078.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
gi|260631302|gb|EEX49486.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
Length = 148
Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 3/127 (2%)
Query: 13 YSTIAVANFFIDKGVKYSI-PIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
YS + VAN FI + ++ + +K+Q+ ++ + + + D+ W+ GPV
Sbjct: 3 YSAMQVANSFIQRAKDGAVTDLTPMKLQKLMFFAQSWSLKETGYPLFDDFFSRWQYGPVI 62
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFR--IFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
+YH FK F PI F + + + E+++ I +Y +S QL +
Sbjct: 63 PSIYHEFKSFRDQPITSYGIDVFGNTVMVSEDDPQSWELIDDIIKEYGEYSASQLSWMTH 122
Query: 130 EENKTWR 136
+ W
Sbjct: 123 QPKTAWS 129
>gi|158422490|ref|YP_001523782.1| uncharacterized phage-associated protein [Azorhizobium caulinodans
ORS 571]
gi|158329379|dbj|BAF86864.1| uncharacterized phage-associated protein [Azorhizobium caulinodans
ORS 571]
Length = 213
Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 66/152 (43%), Gaps = 5/152 (3%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+S++ +AN F+D + + +++ + +Y+ H ++ ++++E QAWK GPV
Sbjct: 63 HSSLTIANRFLDLANEEGDTLTPMQLLKLVYIAHGWMLGLYGVPLINDEVQAWKYGPVIP 122
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+YH F S P+ + P +++ ++ Y + + +L + +
Sbjct: 123 KLYHSISQFRSDPVRGPLRAHD---PDPLVSVENALIQQVYEIYGNMTGIELSRLTHQPG 179
Query: 133 KTWRRLYDPNDPN--TNRTITVEEITKMADGS 162
W + Y N + + + +A G+
Sbjct: 180 SPWAQTYQDGVSNIVISNDLIEDHYRTLASGA 211
>gi|71274687|ref|ZP_00650975.1| similar to Uncharacterized phage-associated protein [Xylella
fastidiosa Dixon]
gi|71902094|ref|ZP_00684130.1| similar to Uncharacterized phage-associated protein [Xylella
fastidiosa Ann-1]
gi|170730076|ref|YP_001775509.1| phage-associated protein-like protein [Xylella fastidiosa M12]
gi|71164419|gb|EAO14133.1| similar to Uncharacterized phage-associated protein [Xylella
fastidiosa Dixon]
gi|71728139|gb|EAO30334.1| similar to Uncharacterized phage-associated protein [Xylella
fastidiosa Ann-1]
gi|167964869|gb|ACA11879.1| Uncharacterized phage-associated protein-like protein [Xylella
fastidiosa M12]
Length = 173
Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
PY +AN F+ K + + L++ + +YL H + ++ ++DE +AW+ GPV
Sbjct: 2 PYLPTIIANDFLQKASQEGRALTPLQVLKLVYLAHGWCLGVHRQPLIDEPVEAWRAGPVI 61
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIA--NQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
+Y+ K + S+ I + + + + + + I+ S+W Y+ + +L EI +
Sbjct: 62 RSLYNAIKQYGSNAITERLPVRWFSWGRALKIDATAAAILASVWVTYRRYGGVELAEITR 121
Query: 130 EENKTWRRLYD 140
E W +
Sbjct: 122 AEGSPWWTTWK 132
>gi|153810977|ref|ZP_01963645.1| hypothetical protein RUMOBE_01368 [Ruminococcus obeum ATCC 29174]
gi|149832865|gb|EDM87948.1| hypothetical protein RUMOBE_01368 [Ruminococcus obeum ATCC 29174]
Length = 152
Score = 152 bits (383), Expect = 8e-35, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+ + VAN +++G I I +K+Q+ +YL + K + + + WK GPV
Sbjct: 3 TALNVANNVLERGFSEDIDITPMKLQKLVYLIYKKYYQDTDKILFQDRFEVWKYGPVVRS 62
Query: 74 VYHRFKYFDSHPIEVIM---DLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
+Y FK F + I+ + S I + + E + +IW+KY+ + L + +
Sbjct: 63 IYDEFKEFGGNAIKRYSKEKNGSVLIVNEKKAADFRECINAIWDKYKLYDGIPLSAMTHK 122
Query: 131 ENKTWRRLYDPNDP 144
+ W + +P
Sbjct: 123 KGTAWYKAAKRQEP 136
>gi|153871345|ref|ZP_02000541.1| phage-associated protein [Beggiatoa sp. PS]
gi|152072191|gb|EDN69461.1| phage-associated protein [Beggiatoa sp. PS]
Length = 173
Score = 152 bits (383), Expect = 8e-35, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 10/142 (7%)
Query: 12 PYSTIAVANFFIDKGVKYS-IPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV 70
PYS+ AVAN FI K + I +K+Q+ +Y H + + + EE QAWK GPV
Sbjct: 4 PYSSKAVANSFILKAKEKGCTDISPMKLQKLVYFAHGWFMAFTDQEFIKEEVQAWKFGPV 63
Query: 71 FVGVYHRFKYFDSHPIEVIMDLSFRIFPKIA---------NQEIGEIMESIWNKYQSHST 121
+Y FK + + IE++ K+ + + I+ +W Y +
Sbjct: 64 IPDIYFEFKEYGNSNIEILAKELRFTGSKLELITPNIDDDDDDANRIINEVWRAYGEFTP 123
Query: 122 EQLQEIVQEENKTWRRLYDPND 143
QL I + W +
Sbjct: 124 IQLSNITHAKGSPWEMVASSYG 145
>gi|17988803|ref|NP_541436.1| hypothetical protein BMEII0458 [Brucella melitensis bv. 1 str. 16M]
gi|261216275|ref|ZP_05930556.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|297249377|ref|ZP_06933078.1| hypothetical protein BAYG_02125 [Brucella abortus bv. 5 str. B3196]
gi|17984622|gb|AAL53700.1| hypothetical protein BMEII0458 [Brucella melitensis bv. 1 str. 16M]
gi|260917882|gb|EEX84743.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|297173246|gb|EFH32610.1| hypothetical protein BAYG_02125 [Brucella abortus bv. 5 str. B3196]
Length = 183
Score = 151 bits (382), Expect = 9e-35, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 6/141 (4%)
Query: 8 QTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQ 67
+ PY A+AN +D+ + I + +L +Q+ +Y H +++ K ++ +AW+
Sbjct: 1 MSGGPYDPRAIANLMLDEADRSGIQVTNLALQKLLYFAHSIFLIETKHPLVSGYFEAWQY 60
Query: 68 GPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPK------IANQEIGEIMESIWNKYQSHST 121
GPV Y FK S+PI+ + + + + + I + Y S
Sbjct: 61 GPVHPAAYSAFKTAGSYPIDFRATGQNVMTGEQAALELPEDLTVRRHLARIMSSYGQLSP 120
Query: 122 EQLQEIVQEENKTWRRLYDPN 142
+L +I + W + D
Sbjct: 121 GRLVDISHAKGAPWDFIVDKG 141
>gi|281357129|ref|ZP_06243618.1| phage-associated protein [Victivallis vadensis ATCC BAA-548]
gi|281316160|gb|EFB00185.1| phage-associated protein [Victivallis vadensis ATCC BAA-548]
Length = 157
Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
Query: 15 TIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+ +A++ I+K + I +LK+Q+ +Y ++ + DE+ QAW GPV +
Sbjct: 8 PLTIASYLIEKSITSGDCITNLKLQKLVYYAQAWFIVLFGIKLFDEDIQAWVHGPVVRSI 67
Query: 75 YHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEI---MESIWNKYQSHSTEQLQEIVQEE 131
Y +K + P+ P++ + G++ ++ I + +S QL+ + +E
Sbjct: 68 YDCYKQYGYKPLPC---------PRVKSDLPGDVQKHLDEILKIFGGYSGFQLELMTHQE 118
Query: 132 NKTWRRLYD--PNDPNTNRTITVEEITKM 158
W+ P D +R I+ E++
Sbjct: 119 -APWKNARKGLPPDMACDRVISPEDMRTF 146
>gi|229070620|ref|ZP_04203858.1| Prophage ps3 protein 01 [Bacillus cereus F65185]
gi|228712525|gb|EEL64462.1| Prophage ps3 protein 01 [Bacillus cereus F65185]
Length = 352
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 17 AVANFFIDKG------VKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV 70
+V FFI KG + + + LK+Q+ +Y + ++ QAW+ GPV
Sbjct: 192 SVEKFFIIKGQEFNEKDEDDLRVSPLKLQKLMYFAQGWSHAFTGHDLFEDNFQAWQHGPV 251
Query: 71 FVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
+YHR+K + S I+ ++S ++Q I+ IW+KY + L+++
Sbjct: 252 IPDLYHRYKSYGSKRIDKDFNVSIHDLGLTSDQL--SILHWIWDKYSKFEAKFLEDLTHM 309
Query: 131 ENKTWRRLYDP--NDPNTNRTITVEEITKMAD 160
E WR+ +D + + I E+I D
Sbjct: 310 E-YPWRKTRADLTDDASCDWVIEKEDIHHFFD 340
>gi|254712605|ref|ZP_05174416.1| hypothetical protein BcetM6_04357 [Brucella ceti M644/93/1]
gi|254715677|ref|ZP_05177488.1| hypothetical protein BcetM_04377 [Brucella ceti M13/05/1]
gi|261217425|ref|ZP_05931706.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261320299|ref|ZP_05959496.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|260922514|gb|EEX89082.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261292989|gb|EEX96485.1| conserved hypothetical protein [Brucella ceti M644/93/1]
Length = 185
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 6/140 (4%)
Query: 9 TNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQG 68
+ PY A+AN +D+ + I + +L +Q+ +Y H +++ K ++ +AW+ G
Sbjct: 4 SGGPYDPRAIANLMLDEADRSGIQVTNLALQKLLYFAHSIFLIETKHPLVSGYFEAWQYG 63
Query: 69 PVFVGVYHRFKYFDSHPIEVIMDLSFRIFPK------IANQEIGEIMESIWNKYQSHSTE 122
PV Y FK S+PI+ + + + + + I + Y S
Sbjct: 64 PVHPAAYSAFKTAGSYPIDFRATGQNVMTGEQAALELPEDLTVRRHLARIMSSYGQLSPG 123
Query: 123 QLQEIVQEENKTWRRLYDPN 142
+L +I + W + D
Sbjct: 124 RLVDISHAKGAPWDFIVDKG 143
>gi|62317337|ref|YP_223190.1| hypothetical protein BruAb2_0400 [Brucella abortus bv. 1 str.
9-941]
gi|225629298|ref|ZP_03787331.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|237816891|ref|ZP_04595883.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254690835|ref|ZP_05154089.1| hypothetical protein Babob68_11893 [Brucella abortus bv. 6 str.
870]
gi|254695855|ref|ZP_05157683.1| hypothetical protein Babob3T_14760 [Brucella abortus bv. 3 str.
Tulya]
gi|254698617|ref|ZP_05160445.1| hypothetical protein Babob28_13199 [Brucella abortus bv. 2 str.
86/8/59]
gi|254700044|ref|ZP_05161872.1| hypothetical protein Bsuib55_04177 [Brucella suis bv. 5 str. 513]
gi|254703164|ref|ZP_05164992.1| hypothetical protein Bsuib36_04362 [Brucella suis bv. 3 str. 686]
gi|254705690|ref|ZP_05167518.1| hypothetical protein BpinM_01443 [Brucella pinnipedialis
M163/99/10]
gi|254710922|ref|ZP_05172733.1| hypothetical protein BpinB_11810 [Brucella pinnipedialis B2/94]
gi|254732064|ref|ZP_05190642.1| hypothetical protein Babob42_12999 [Brucella abortus bv. 4 str.
292]
gi|256015595|ref|YP_003105604.1| putative phage-associated protein [Brucella microti CCM 4915]
gi|256029304|ref|ZP_05442918.1| hypothetical protein BpinM2_01368 [Brucella pinnipedialis
M292/94/1]
gi|256043706|ref|ZP_05446629.1| hypothetical protein Bmelb1R_04397 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256058993|ref|ZP_05449204.1| hypothetical protein Bneo5_01358 [Brucella neotomae 5K33]
gi|256111251|ref|ZP_05452282.1| hypothetical protein Bmelb3E_01433 [Brucella melitensis bv. 3 str.
Ether]
gi|256157499|ref|ZP_05455417.1| hypothetical protein BcetM4_01398 [Brucella ceti M490/95/1]
gi|256253523|ref|ZP_05459059.1| hypothetical protein BcetB_04342 [Brucella ceti B1/94]
gi|256256019|ref|ZP_05461555.1| hypothetical protein Babob9C_01348 [Brucella abortus bv. 9 str.
C68]
gi|256262266|ref|ZP_05464798.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260167604|ref|ZP_05754415.1| putative phage-associated protein [Brucella sp. F5/99]
gi|260544571|ref|ZP_05820392.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260564894|ref|ZP_05835379.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260567907|ref|ZP_05838376.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|260756415|ref|ZP_05868763.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260759847|ref|ZP_05872195.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260763086|ref|ZP_05875418.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260882237|ref|ZP_05893851.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261220653|ref|ZP_05934934.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261313110|ref|ZP_05952307.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261318504|ref|ZP_05957701.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261322937|ref|ZP_05962134.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261750526|ref|ZP_05994235.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261753784|ref|ZP_05997493.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|261757026|ref|ZP_06000735.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265986303|ref|ZP_06098860.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265990127|ref|ZP_06102684.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265992763|ref|ZP_06105320.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|265995997|ref|ZP_06108554.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|62197530|gb|AAX75829.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|225615794|gb|EEH12843.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|237787704|gb|EEP61920.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|255998255|gb|ACU49942.1| putative phage-associated protein [Brucella microti CCM 4915]
gi|260097842|gb|EEW81716.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260152537|gb|EEW87630.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260154572|gb|EEW89653.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|260670165|gb|EEX57105.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260673507|gb|EEX60328.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260676523|gb|EEX63344.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260871765|gb|EEX78834.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260919237|gb|EEX85890.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261297727|gb|EEY01224.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261298917|gb|EEY02414.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261302136|gb|EEY05633.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261737010|gb|EEY25006.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|261740279|gb|EEY28205.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261743537|gb|EEY31463.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262550294|gb|EEZ06455.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|262763633|gb|EEZ09665.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263000796|gb|EEZ13486.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263091983|gb|EEZ16289.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|264658500|gb|EEZ28761.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 185
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 6/140 (4%)
Query: 9 TNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQG 68
+ PY A+AN +D+ + I + +L +Q+ +Y H +++ K ++ +AW+ G
Sbjct: 4 SGGPYDPRAIANLMLDEADRSGIQVTNLALQKLLYFAHSIFLIETKHPLVSGYFEAWQYG 63
Query: 69 PVFVGVYHRFKYFDSHPIEVIMDLSFRIFPK------IANQEIGEIMESIWNKYQSHSTE 122
PV Y FK S+PI+ + + + + + I + Y S
Sbjct: 64 PVHPAAYSAFKTAGSYPIDFRATGQNVMTGEQAALELPEDLTVRRHLARIMSSYGQLSPG 123
Query: 123 QLQEIVQEENKTWRRLYDPN 142
+L +I + W + D
Sbjct: 124 RLVDISHAKGAPWDFIVDKG 143
>gi|253990607|ref|YP_003041963.1| hypothetical protein PAU_03133 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782057|emb|CAQ85221.1| Hypothetical Protein PAU_03133 [Photorhabdus asymbiotica]
Length = 155
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 10/148 (6%)
Query: 13 YSTIAVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
Y TIAVAN FI+K ++ IP + +K+Q+ ++ + ++D+ W+ GPV
Sbjct: 3 YPTIAVANAFINKAIQGQIPDLTPMKLQKLMFYAQSWHLKIHNDPLVDDFFAKWQYGPVI 62
Query: 72 VGVYHRFKYFDSHPIEVIM-------DLSFRIFPKIANQEIGE--IMESIWNKYQSHSTE 122
+YH K + ++PI + + + P I ++ +++ I N Y
Sbjct: 63 PSLYHEVKRYGANPICRTISTLLNTEEGFAIVTPTIPKEDTRTNVLIDKIINVYGPLRGT 122
Query: 123 QLQEIVQEENKTWRRLYDPNDPNTNRTI 150
QL + W + + N +
Sbjct: 123 QLSYLTHLPGTAWSETTEDSAVINNELL 150
>gi|315497342|ref|YP_004086146.1| phage-associated protein-like protein [Asticcacaulis excentricus CB
48]
gi|315415354|gb|ADU11995.1| uncharacterized phage-associated protein-like protein
[Asticcacaulis excentricus CB 48]
Length = 159
Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 8/147 (5%)
Query: 11 PPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV 70
P +S A+AN F+ P+D +K+Q+ +Y+ H + ++ ++ + +AW GPV
Sbjct: 2 PGHSATAIANEFVRL---NGGPLDQMKLQKLVYMAHGWNLALNQEPLVKDRIEAWDGGPV 58
Query: 71 FVGVYHRFKYFDSHPIEVIMDLSFR--IFPKIANQEIGEIMESIWNKYQSHSTEQLQEIV 128
F ++ K+F ++D R I +++ +W KY+ ++ L E+
Sbjct: 59 FRAIWDHIKFFGISGSGFLVDPFARNPITTNALTPNERAVIDHVWKKYKPYTGHMLSEMT 118
Query: 129 QEENKTWRRLYDPNDPNTNRTITVEEI 155
+ W Y N I+ E I
Sbjct: 119 HQRGTPWYNSYLS---GRNTAISDEAI 142
>gi|197294690|ref|YP_001799231.1| phage-associated protein [Candidatus Phytoplasma australiense]
gi|171854017|emb|CAM11984.1| Uncharacterized phage-associated protein [Candidatus Phytoplasma
australiense]
Length = 156
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+ VAN+ I + I ++KI + +Y + Q K++ E+ +AW GPV +
Sbjct: 8 NVFDVANYLISQTDTNKYKISNMKINKLLYYIQGHYIAQTGKTLFPEKIEAWLFGPVILN 67
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIA-NQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+Y F F +PI D + K E +I++ + NKY S +L EE
Sbjct: 68 IYSEFFNFVDNPIPN--DYVCKGASKNELTTEAKKIIDKVINKYSPFSARELSVKTHEE- 124
Query: 133 KTWRRLYDPNDPNTNRTITVEEITKM 158
W+ Y+P N IT + + K
Sbjct: 125 LPWKEAYNPRKKWQNNIITHQLLEKF 150
>gi|258516059|ref|YP_003192281.1| phage-associated protein [Desulfotomaculum acetoxidans DSM 771]
gi|257779764|gb|ACV63658.1| Putative phage-associated protein [Desulfotomaculum acetoxidans DSM
771]
Length = 339
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Query: 14 STIAVANFFIDKGV-KYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+T+ V+ FFI K + I HLK+Q+ +Y + + E+ +AW GPVF
Sbjct: 170 NTLNVSKFFITKIYPEAGEVITHLKLQKMVYYVQSWYLAFFQSPFFHEDCEAWVHGPVFP 229
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
G+Y +K F + PI + + IF N + I+ +W Y + + L+++ E
Sbjct: 230 GLYDIYKDFGNKPITKLTRFNENIF----NNDQKFILNMVWQVYGKYDAKYLEKLTHIE- 284
Query: 133 KTWRRLYD--PNDPNTNRTITVEEITKMADGSNISPE-NVVEQIKKPV 177
W+++ + D ++ I E+I I N +E + K V
Sbjct: 285 YPWKKVRESYKKDERSSEVIVKEDIKDYYTHIKIKHNINSIEDLNKYV 332
>gi|288958028|ref|YP_003448369.1| hypothetical protein AZL_011870 [Azospirillum sp. B510]
gi|288910336|dbj|BAI71825.1| hypothetical protein AZL_011870 [Azospirillum sp. B510]
Length = 172
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 60/139 (43%), Gaps = 6/139 (4%)
Query: 11 PPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV 70
AVANF +D + +L +Q+ +Y H ++ + ++ + +AW+ GPV
Sbjct: 7 AGLDGRAVANFVLDFCEARGRKVTNLALQKIVYFCHVWSLIMLDRPLVKHQFEAWQYGPV 66
Query: 71 FVGVYHRFKYFDSHPIE------VIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQL 124
+Y +FK FD PIE + R+ + + +++ I + Y S L
Sbjct: 67 LQYLYRQFKAFDRRPIEGRATEIDPATGANRVVTYRFDDDTEHMLQEIVDFYSRISAGDL 126
Query: 125 QEIVQEENKTWRRLYDPND 143
E+ W ++++ +
Sbjct: 127 VELSHAAGSPWDQVWNHKE 145
>gi|38234221|ref|NP_939988.1| hypothetical protein DIP1646 [Corynebacterium diphtheriae NCTC
13129]
gi|38200483|emb|CAE50176.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
Length = 159
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 56/135 (41%), Gaps = 3/135 (2%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
Y +AN +++ I +K+Q+ +Y + KS+ E + W+ GPV
Sbjct: 3 YVPTLIANNVLNRAFAEKYRISPMKLQKILYFAAAEYQKNTGKSLFSERFETWQYGPVLR 62
Query: 73 GVYHRFKYFDSHPIEVI---MDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
VY F+ F I + + + A+ + +++++W+ + HS L I
Sbjct: 63 SVYSEFRPFSRDFITRFAKDAENQSHMINESADPALQRVLDTVWSATKGHSAVDLSRITH 122
Query: 130 EENKTWRRLYDPNDP 144
EN W + + P
Sbjct: 123 MENSAWDKSFQNEQP 137
>gi|16127745|ref|NP_422309.1| hypothetical protein CC_3515 [Caulobacter crescentus CB15]
gi|221236566|ref|YP_002519003.1| hypothetical protein CCNA_03630 [Caulobacter crescentus NA1000]
gi|13425245|gb|AAK25477.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220965739|gb|ACL97095.1| hypothetical protein CCNA_03630 [Caulobacter crescentus NA1000]
Length = 188
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 66/160 (41%), Gaps = 10/160 (6%)
Query: 6 FTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAW 65
TQ AVAN +DK IPI +L +Q+ +Y H ++ K + +++ +AW
Sbjct: 4 LTQDPQSVDARAVANLLLDKAAALDIPISNLALQKLLYFAHGRFLVDKGRPLVNGFFEAW 63
Query: 66 KQGPVFVGVYHRFKYFDSHPI-------EVIMDLSFRIFPKIANQEIGEIMESIWNKYQS 118
K GPV VY F I +++ L + P +Q+I E +E +
Sbjct: 64 KFGPVHPVVYRCFSANGPKYIINRAIKKDILSGLHIIVSP-PRDQDIHEGIERVLLTMGR 122
Query: 119 HSTEQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKM 158
S QL + W + N P TN + + K+
Sbjct: 123 MSASQLVAVSHASGGPWDVIA--NGPGTNLGLGLRICDKV 160
>gi|291458021|ref|ZP_06597411.1| putative prophage protein [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291419353|gb|EFE93072.1| putative prophage protein [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 156
Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 8 QTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQ 67
+ YS +AN+F+ KG + H K+Q+ Y K + D + QAW
Sbjct: 7 ENTGKYSVFDIANWFLSKG-----EMTHKKLQKLCYYAQAWCYALKGYRLEDTDYQAWIH 61
Query: 68 GPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEI 127
GPV ++ RFK F PI++ + RI P E ++ +W+ Y ++ L+ +
Sbjct: 62 GPVSPALWERFKSFAYDPIKIKGTVRLRIDP-----EDEALLNDVWDTYGENTGNALETL 116
Query: 128 VQEENKTW---RRLYDPNDPNT 146
E W RR Y+P++ T
Sbjct: 117 THRE-LPWIEARRGYEPDERCT 137
>gi|260844980|ref|YP_003222758.1| hypothetical protein ECO103_2857 [Escherichia coli O103:H2 str.
12009]
gi|257760127|dbj|BAI31624.1| hypothetical protein ECO103_2857 [Escherichia coli O103:H2 str.
12009]
gi|323176675|gb|EFZ62265.1| hypothetical protein ECOK1180_4037 [Escherichia coli 1180]
Length = 156
Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 11/141 (7%)
Query: 22 FIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQ-KKKSMLDEEPQAWKQGPVFVGVYHRFK 79
FIDK + I + +K+Q+ ++ T + K + D+ W GPV +YH K
Sbjct: 12 FIDKAKRGEIKDLTPMKLQKLLFYTQSWHLKLFNGKPLFDDLFARWPYGPVIPHLYHMLK 71
Query: 80 YFDSHPIEVIMDLSF-------RIFPKIA--NQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
+ S+ I+ ++ + RI P I + E G +++ I Y S+S +L +
Sbjct: 72 KYGSNEIQEMISIIIDSDGEWKRITPTIQNGDTETGRLIDKIVEVYGSYSGTELSNMTHA 131
Query: 131 ENKTWRRLYDPNDPNTNRTIT 151
N W + P + +
Sbjct: 132 PNAAWSKGQPDGGPILHTDMA 152
>gi|261866994|ref|YP_003254916.1| hypothetical protein D11S_0286 [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261412326|gb|ACX81697.1| hypothetical protein D11S_0286 [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 147
Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 3/127 (2%)
Query: 13 YSTIAVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
YS+IA+AN FI K I + +K+Q+ ++ T + K + + + W+ GPV
Sbjct: 3 YSSIAIANSFIGKANIGEISNLTPMKLQKLMFYTQSWYIKLYGKPLFEGGVERWQFGPVL 62
Query: 72 VGVYHRFKYFDSHPIEVIMDLSF--RIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
+YH FK F S I + + K ++++ ++ I Y QL +
Sbjct: 63 PEIYHEFKPFGSRIISSFGTDIWGKQQIIKESDKDTLLFLDKIIEIYGKFDGPQLSWMTH 122
Query: 130 EENKTWR 136
+ W
Sbjct: 123 QPETAWS 129
>gi|170718371|ref|YP_001783596.1| hypothetical protein HSM_0245 [Haemophilus somnus 2336]
gi|168826500|gb|ACA31871.1| conserved hypothetical protein [Haemophilus somnus 2336]
Length = 145
Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 1/125 (0%)
Query: 13 YSTIAVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
YS + VAN FI K + +P + +K+Q+ ++ + + ++D+ W+ GPV
Sbjct: 3 YSAMQVANAFIQKAQEGKVPALTPMKLQKLMFFAQSWYLKKYHVRLIDDHFVRWQYGPVI 62
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
VY+ F F S I F I ++ + Y S +L + +
Sbjct: 63 PSVYYEFSSFGSCDINQPATNPFGIIAPNLTIADDAFIDEVIATYGSFDGWKLSVMTHQP 122
Query: 132 NKTWR 136
W
Sbjct: 123 KTAWS 127
>gi|312897856|ref|ZP_07757271.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
gi|310621055|gb|EFQ04600.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
Length = 217
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 80/173 (46%), Gaps = 10/173 (5%)
Query: 14 STIAVANFFIDKGVKYSIP--IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
I VA FFI+ + +L++ + +Y + + + + ++ +AWK GPV
Sbjct: 38 KAIDVARFFINIVNSLPTDDLMTNLRVNKLLYFAQGECLKKLGHPLFTDDIEAWKYGPVV 97
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
VY ++K + +PI+ + S F ++E E++ + + Y S+ L ++ ++
Sbjct: 98 PSVYEQYKSLEKNPIQESIPYSKGAF----SEEERELLFDVASYYGQISSSALVKMSHQK 153
Query: 132 NKTWRRLYDPNDPNTNRTITVEEITKMADGSNISP--ENVVEQIKKPVRFDSD 182
W+++YDPN + I ++ I N P V+ +I+ R D +
Sbjct: 154 GSPWQQVYDPNRK--HVKIDIDSIYSYFSQQNPIPTFSEVINKIETVGRRDDE 204
>gi|170782774|ref|YP_001711108.1| putative prophage protein [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157344|emb|CAQ02531.1| putative prophage protein [Clavibacter michiganensis subsp.
sepedonicus]
Length = 161
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 6/132 (4%)
Query: 13 YSTIAVANFFIDKGV-KYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
Y +A +F+ + + +LK+Q+ +Y + + + +E QAW GPV
Sbjct: 13 YDASTIARWFLAWADSEEEGALSNLKLQKLLYYAQGHHLARFGAPLFADEIQAWTHGPVV 72
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
VY ++K S+ I D F + E +++ S+W + S S +L+E+ E
Sbjct: 73 PVVYRQYKDHGSNAIPFTEDFDFFQV----DTETTDLLASVWETFGSKSAWKLREMTHSE 128
Query: 132 NKTWRRLYDPND 143
W Y +
Sbjct: 129 -APWTSSYRDGE 139
>gi|217977601|ref|YP_002361748.1| hypothetical protein Msil_1421 [Methylocella silvestris BL2]
gi|217502977|gb|ACK50386.1| conserved hypothetical protein [Methylocella silvestris BL2]
Length = 188
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 9/143 (6%)
Query: 8 QTNPPYSTIAVANFFIDKGVKYS---IPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQA 64
PPY AVAN ++ K +PI +L +Q+ +Y H +++ ++ +A
Sbjct: 1 MIKPPYDPRAVANLLLELAAKEEEGPMPISNLALQKLLYFAHGHFLIRTGVPLVQGAFEA 60
Query: 65 WKQGPVFVGVYHRFKYFDSHPI------EVIMDLSFRIFPKIANQEIGEIMESIWNKYQS 118
WK GPV VY FK PI M + ++++ ++ + Y
Sbjct: 61 WKYGPVHPAVYQAFKGEADQPIRTRATGRNPMTGAVYALEIPDDRQVRRHLKEVLRAYGH 120
Query: 119 HSTEQLQEIVQEENKTWRRLYDP 141
S +L +I W + +
Sbjct: 121 LSPGRLVDIAHAAKGPWATVVNK 143
>gi|85715204|ref|ZP_01046188.1| Uncharacterized phage-associated protein [Nitrobacter sp. Nb-311A]
gi|85698119|gb|EAQ35992.1| Uncharacterized phage-associated protein [Nitrobacter sp. Nb-311A]
Length = 171
Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 62/149 (41%), Gaps = 10/149 (6%)
Query: 15 TIAVANFFIDKGVKY-SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+A +FI++ + + HLK+Q+ IY + + K + E+ +AW GPV
Sbjct: 22 PTDIAKWFINRADREAGDDMTHLKLQKLIYFSQAWHLANFNKPLFQEDIEAWAHGPVVPS 81
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
V+H++K + I I D + + ++ I+ +Y S + L+ + E+
Sbjct: 82 VWHQYKEYRWGSIPPITDDFD------VDANVAGYLDKIYARYGELSGKALERLTH-EHA 134
Query: 134 TWRRLYD--PNDPNTNRTITVEEITKMAD 160
WR P + TI+ +
Sbjct: 135 PWRETRGDLPPEAKCTDTISKNLMRDFYA 163
>gi|91228525|ref|ZP_01262446.1| Uncharacterized phage-associated protein [Vibrio alginolyticus
12G01]
gi|91187901|gb|EAS74212.1| Uncharacterized phage-associated protein [Vibrio alginolyticus
12G01]
Length = 155
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 67/145 (46%), Gaps = 11/145 (7%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
YS + VA + + +L++Q+ Y+ H + ++ ++ ++ AWK GPV
Sbjct: 7 YSAVDVAWSLLKHAKEQGKCFSNLQLQKLTYVCHGLSLAHFQRPLVVDDVFAWKFGPVVP 66
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
VY RFK + S I D++ +QE I++ + +K + QL ++ E
Sbjct: 67 SVYFRFKSYGSSVITEQCDVAL-------DQESESIVKDVVSKLGHLTGPQLVDLTHREG 119
Query: 133 KTWRRLYDPNDPNTNRTITVEEITK 157
W +++D T++ + + + +
Sbjct: 120 SPWHQVWD----GTHQKVIPDHLIQ 140
>gi|225869434|ref|YP_002745382.1| hypothetical protein SZO_18870 [Streptococcus equi subsp.
zooepidemicus]
gi|225871436|ref|YP_002747383.1| hypothetical protein SEQ_2178 [Streptococcus equi subsp. equi 4047]
gi|225700840|emb|CAW95560.1| hypothetical protein SEQ_2178 [Streptococcus equi subsp. equi 4047]
gi|225702710|emb|CAX00835.1| hypothetical protein SZO_18870 [Streptococcus equi subsp.
zooepidemicus]
Length = 249
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 19/162 (11%)
Query: 6 FTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAW 65
Q++ S I VA FF+ P+ HL++Q+ +YL + +L +S+ DE+ A+
Sbjct: 85 VLQSDSKISAIDVAKFFLAM-----RPLSHLQLQKLVYLAYKTYLLAYGESLFDEKIVAF 139
Query: 66 KQGPVFVGVYHRFKYFDSHPIEVIMDLSF------------RIFPKIANQEIGEIMESIW 113
+ GPV VYH FK + S I++ + R+ ++I ++ +
Sbjct: 140 QYGPVVEEVYHSFKKYGSEVIDIDDHTEYILKDIHLPQALGRMLLVEDAKKIVPVLLDVV 199
Query: 114 NKYQSHSTEQLQEIVQEENKTWRRLYDP--NDPNTNRTITVE 153
+Y + +L ++ E W+ ++ P N T+ I +
Sbjct: 200 KQYGDLTGGELVKLTHSEKGPWQTVFRPQLNCEITDEVILAQ 241
>gi|282900240|ref|ZP_06308193.1| Putative prophage protein (Ps3) [Cylindrospermopsis raciborskii
CS-505]
gi|281194882|gb|EFA69826.1| Putative prophage protein (Ps3) [Cylindrospermopsis raciborskii
CS-505]
Length = 152
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 59/146 (40%), Gaps = 11/146 (7%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+ VA +FI + I +LK+Q+ +Y + ++ +EE +AW GPV
Sbjct: 3 TCFDVARYFIHLANETGSYISNLKLQKLVYYAQAWHLALYDTALFEEEFEAWVHGPVIPV 62
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
+Y ++K F PI+ + + I ++ + Y +L+ + +E
Sbjct: 63 LYQQYKGFGWRPIQQ------EVEEPNLPENIRSFLDEVVEVYFQCDAYELERMTHQE-T 115
Query: 134 TW----RRLYDPNDPNTNRTITVEEI 155
W R P D N IT E I
Sbjct: 116 PWIESRARGSLPMDAPCNEIITKESI 141
>gi|115334623|ref|YP_764469.1| GepA protein [Geobacillus phage GBSV1]
gi|155042929|ref|YP_001425596.1| GepA [Bacillus virus 1]
gi|84688573|gb|ABC61269.1| GepA protein [Geobacillus phage GBSV1]
gi|115529833|gb|ABJ09612.1| GepA [Bacillus virus 1]
Length = 249
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 22/167 (13%)
Query: 6 FTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAW 65
+ + VA F + IP HLK+Q+ +Y + + +L+ + + E A+
Sbjct: 86 LVSQDQELTAYDVAKFILSV-----IPSSHLKLQKLLYFAYAEFLLRTGEKLFREPILAF 140
Query: 66 KQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFP----------KIANQEIG----EIMES 111
K GPV V+H++K S I+ D + I+P KIA+ E G + +
Sbjct: 141 KYGPVVESVFHKYKVHGSSIIDYKEDETVCIYPEELAVTPSFMKIASSEHGLIALDCLID 200
Query: 112 IWNKYQSHSTEQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKM 158
++ KY S ++L W R+Y P N IT + I +
Sbjct: 201 VFEKYGHLSAQELVYKTHRPGGPWDRVYKPGK---NAVITDDLILQY 244
>gi|262381010|ref|ZP_06074148.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262296187|gb|EEY84117.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 169
Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 75/145 (51%), Gaps = 16/145 (11%)
Query: 14 STIAVANFFIDKGVKYSIP--IDHLKIQQFIYLTHCDVVLQKKKSMLDEEP---QAWKQG 68
IA+AN+FIDK + P + L++ +++Y+ + + +S+L+E +AW+ G
Sbjct: 4 DAIAIANYFIDKAKETYPPYELTLLRLVKYVYIAYGFGLALLDRSILNERFDKVEAWRYG 63
Query: 69 PVFVGVYHRFKYFDSHPI----------EVIMDLSFRIFPKIANQEIGEIMESIWNKYQS 118
PV VYH FK+ + PI + +L F + PK+ ++ I I++ +W++Y+
Sbjct: 64 PVIPSVYHSFKHNQNRPITDKSSILSYEDDNGNLYFDV-PKVKDEGIIMILDFVWDRYKD 122
Query: 119 HSTEQLQEIVQEENKTWRRLYDPND 143
S L EI+ ++ W+ Y
Sbjct: 123 KSVHDLIEILHKDGTPWKFCYKEGS 147
>gi|270717131|ref|ZP_06223248.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
gi|319776465|ref|YP_004138953.1| hypothetical protein-related [Haemophilus influenzae F3047]
gi|319897242|ref|YP_004135437.1| uncharacterised protein, phage-related [Haemophilus influenzae
F3031]
gi|329123965|ref|ZP_08252514.1| hypothetical protein HMPREF9095_1732 [Haemophilus aegyptius ATCC
11116]
gi|270315532|gb|EFA27756.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
gi|317432746|emb|CBY81111.1| putative uncharacterised protein, phage-related [Haemophilus
influenzae F3031]
gi|317451056|emb|CBY87289.1| putative uncharacterised protein, phage-related [Haemophilus
influenzae F3047]
gi|327467759|gb|EGF13252.1| hypothetical protein HMPREF9095_1732 [Haemophilus aegyptius ATCC
11116]
Length = 146
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
Query: 13 YSTIAVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
YS + VAN FI K + IP + +K+Q+ ++ + K + ++E W+ GPV
Sbjct: 3 YSAMQVANAFIQKAQEGKIPNLTPMKLQKLLFFAQSWYLKNNKSRLFNDEFIRWQYGPVV 62
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRI-FPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
VY+ F I+ SF F N+E ++ + Y ++ QL E+
Sbjct: 63 QSVYYEFAKNKGTEIKHKAKNSFGTDFESRLNREDEFFLDELITAYGEYTGWQLSEMTHT 122
Query: 131 ENKTWRRL 138
+ W +
Sbjct: 123 QGGAWEKG 130
>gi|314940587|ref|ZP_07847721.1| conserved hypothetical protein [Enterococcus faecium TX0133a04]
gi|314942538|ref|ZP_07849376.1| conserved hypothetical protein [Enterococcus faecium TX0133C]
gi|314953905|ref|ZP_07856764.1| conserved hypothetical protein [Enterococcus faecium TX0133A]
gi|314992729|ref|ZP_07858139.1| conserved hypothetical protein [Enterococcus faecium TX0133B]
gi|314996740|ref|ZP_07861760.1| conserved hypothetical protein [Enterococcus faecium TX0133a01]
gi|313589126|gb|EFR67971.1| conserved hypothetical protein [Enterococcus faecium TX0133a01]
gi|313592749|gb|EFR71594.1| conserved hypothetical protein [Enterococcus faecium TX0133B]
gi|313594122|gb|EFR72967.1| conserved hypothetical protein [Enterococcus faecium TX0133A]
gi|313598697|gb|EFR77542.1| conserved hypothetical protein [Enterococcus faecium TX0133C]
gi|313640232|gb|EFS04813.1| conserved hypothetical protein [Enterococcus faecium TX0133a04]
Length = 155
Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 66/149 (44%), Gaps = 5/149 (3%)
Query: 13 YSTIAVANFFIDKGV-KYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
+ VA +F+ I LKIQ+ +Y + + ++D E +AW GPV
Sbjct: 2 HKPKDVAKWFVANTDVASGSQITPLKIQKLLYYAQAWYLAIYNEPLMDTEFEAWAHGPVV 61
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
VYH F +P+ + + F +++ ++ ++++ I + Y + + L+++ +E
Sbjct: 62 PEVYHGLSDFKYNPVSISAEY-FSDAEEVSCEQEVDLLQQIMDIYGIYDGKYLEKLTHQE 120
Query: 132 NKTWRRLYD--PNDPNTNRTITVEEITKM 158
+ W + P + N I+ E +
Sbjct: 121 D-PWIQTRGDLPPEARCNEVISREVMKDF 148
>gi|160915529|ref|ZP_02077740.1| hypothetical protein EUBDOL_01537 [Eubacterium dolichum DSM 3991]
gi|158432649|gb|EDP10938.1| hypothetical protein EUBDOL_01537 [Eubacterium dolichum DSM 3991]
Length = 182
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 70/157 (44%), Gaps = 7/157 (4%)
Query: 14 STIAVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+ ANFFID I +L++ + +Y + ++ + D+E +AWK GPV
Sbjct: 3 KAVDYANFFIDLANSSDDDYISNLRLNKLLYFAQGYSLYKRGMPLFDDEIEAWKYGPVVP 62
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
VY FK I+ + + + EI+ ++ ++ +S+ +L +I +
Sbjct: 63 SVYRTFKVCGRGNIDETYGDY---NVENFSSDELEILLNVAEEFGKYSSPKLVDITHAQG 119
Query: 133 KTWRRLYDPNDPNTNRTITVEEI-TKMADGSNISPEN 168
W+++++ + + I+ + I D +SP N
Sbjct: 120 SPWQQVFNVD--AKHTIISKKSIADYFRDKMKLSPFN 154
>gi|273809596|ref|YP_003344834.1| phage-associated protein [Aggregatibacter phage S1249]
gi|261410503|gb|ACX80334.1| phage-associated protein [Aggregatibacter phage S1249]
Length = 146
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 2/125 (1%)
Query: 13 YSTIAVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
YS + VAN FI K + IP + +K+Q+ ++ + ++++E W+ GPV
Sbjct: 3 YSAMQVANAFIQKAQEGKIPALTPMKLQKLMFFAQSWYLRVHSCRLINDEFVRWQYGPVI 62
Query: 72 VGVYHRFKYFDSHPI-EVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
VY+ F I + D ++ + Y + S QL E+ +
Sbjct: 63 QSVYYEFARNGGGIIRQFAKDFRGEDVAYQLETTDDLFLDKVIATYGAFSGWQLSEMTHD 122
Query: 131 ENKTW 135
++ W
Sbjct: 123 KDGAW 127
>gi|322513457|ref|ZP_08066569.1| hypothetical protein HMPREF0027_0321 [Actinobacillus ureae ATCC
25976]
gi|322120748|gb|EFX92629.1| hypothetical protein HMPREF0027_0321 [Actinobacillus ureae ATCC
25976]
Length = 148
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 51/129 (39%), Gaps = 4/129 (3%)
Query: 13 YSTIAVANFFIDKGVKYSIPI---DHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGP 69
YS + +AN FI K + + +K+Q+ ++ + + + ++D+ W GP
Sbjct: 3 YSAMQIANAFIRKAQETPNELPNLTPMKLQKLMFFAQSWYIKKLRARLIDDNFMRWPYGP 62
Query: 70 VFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIA-NQEIGEIMESIWNKYQSHSTEQLQEIV 128
V +Y+ FK IEV F ++ I + Y L ++
Sbjct: 63 VIPSIYYEFKDNGGGNIEVPSKNIFGTPFDSQLEARDEYFLDEIIHVYGGFDGWTLSDMT 122
Query: 129 QEENKTWRR 137
+E WR+
Sbjct: 123 HQEGTAWRK 131
>gi|315288228|gb|EFU47627.1| conserved hypothetical protein [Escherichia coli MS 110-3]
Length = 149
Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 14 STIAVANFFIDKGVKY-SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+ VA++F+ + I +LKIQ+ Y ++ K + +E+ +AW GPV
Sbjct: 5 TCFDVADYFLAHCDEESGDIISNLKIQKLTYYAQGFSLVLLGKPLFNEKIEAWMHGPVVP 64
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+Y +++ + + + + F +++ E+++ ++ Y S +L+ + EE
Sbjct: 65 ELYRKYRDCGNGALPAPENFDAKKF----SEDEIELLDEVYKVYGQFSAWKLRNMTHEEQ 120
Query: 133 KTWRRLYDPNDPNTNRTITVEEITKM 158
W+ Y + ++ IT++ +
Sbjct: 121 -PWKDAYI--EGAVSQEITLDSMKGF 143
>gi|237704836|ref|ZP_04535317.1| phage-associated protein [Escherichia sp. 3_2_53FAA]
gi|226901202|gb|EEH87461.1| phage-associated protein [Escherichia sp. 3_2_53FAA]
gi|332344139|gb|AEE57473.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 147
Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 14 STIAVANFFIDKGVKY-SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+ VA++F+ + I +LKIQ+ Y ++ K + +E+ +AW GPV
Sbjct: 3 TCFDVADYFLAHCDEESGDIISNLKIQKLTYYAQGFSLVLLGKPLFNEKIEAWMHGPVVP 62
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+Y +++ + + + + F +++ E+++ ++ Y S +L+ + EE
Sbjct: 63 ELYRKYRDCGNGALPAPENFDAKKF----SEDEIELLDEVYKVYGQFSAWKLRNMTHEEQ 118
Query: 133 KTWRRLYDPNDPNTNRTITVEEITKM 158
W+ Y + ++ IT++ +
Sbjct: 119 -PWKDAYI--EGAVSQEITLDSMKGF 141
>gi|153869326|ref|ZP_01998966.1| phage-associated protein [Beggiatoa sp. PS]
gi|152074156|gb|EDN71042.1| phage-associated protein [Beggiatoa sp. PS]
Length = 159
Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 6/147 (4%)
Query: 13 YSTIAVANFFIDKGVKY-SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
Y +A++F+ + I HLK+Q+ +Y + K + DE+ +AW GPV
Sbjct: 4 YQVNQIADWFLAAIDREAGDTISHLKLQKLMYYAQAWSLALNHKCLFDEDFEAWTHGPVL 63
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
++ RFK FD + I +S ++E ++ I N Y S + L+E+ E
Sbjct: 64 PTLWQRFKEFDWNSIPPEAIISNTDGLTEEDEE---LLSDILNSYGDLSAKHLEELTHSE 120
Query: 132 NKTWRRLYDPNDPNTNRTITVEEITKM 158
W R N P R+I + +M
Sbjct: 121 -TPW-RSARGNLPIEARSIHIINKERM 145
>gi|296501671|ref|YP_003663371.1| prophage protein 01 [Bacillus thuringiensis BMB171]
gi|296322723|gb|ADH05651.1| Prophage ps3 protein 01 [Bacillus thuringiensis BMB171]
Length = 349
Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 10/149 (6%)
Query: 17 AVANFFIDKG-----VKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
V FFI KG + + LK+Q+ +Y ++ ++ QAW GPV
Sbjct: 190 DVEMFFIIKGQELDDEDDDLRVSPLKLQKLMYYAQGWTFAYTGLNLYKDDFQAWVHGPVI 249
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
+Y ++K + S I+ + +I E +I+ +WN+Y + L+++ E
Sbjct: 250 PDLYAKYKEYGSRRID--ENFGMKIESLKLTFEQLQILHWVWNQYSKFEAKFLEDLTHME 307
Query: 132 NKTWRRLYD--PNDPNTNRTITVEEITKM 158
WR PN+ N I E+I +
Sbjct: 308 -SPWRNTRGDLPNNQGCNWIIRKEDIEEF 335
>gi|146329725|ref|YP_001209182.1| hypothetical protein DNO_0260 [Dichelobacter nodosus VCS1703A]
gi|1628368|emb|CAA67161.1| gepA [Dichelobacter nodosus]
gi|146233195|gb|ABQ14173.1| conserved hypothetical protein [Dichelobacter nodosus VCS1703A]
Length = 156
Score = 135 bits (339), Expect = 9e-30, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
Y I VA+ + + P+ +LK+Q+ YL + + M + +AWK GPV
Sbjct: 6 YKAIDVADALVRLALADKKPLTNLKVQKLTYLVYGCWLGFTNFQMFQDRVEAWKYGPVIP 65
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+Y++ + ++ I+ + P + E +++ I+N+++ QL + ++
Sbjct: 66 VLYNQLARYGANFIQEPI---LEKNPIPKDSEEYQLIHDIYNEFKDLKAWQLVYLTHQKG 122
Query: 133 KTWRRLYDPNDPNT 146
W + + P +
Sbjct: 123 SPWHQTHTPETKGS 136
>gi|288573122|ref|ZP_06391479.1| phage-associated protein [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288568863|gb|EFC90420.1| phage-associated protein [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 149
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Query: 14 STIAVANFFIDKGV-KYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
S VA++ + K I HLK+Q+ +Y V+ + + E +AW GPV
Sbjct: 3 SVFDVASYILSKADLDEGDGITHLKLQKLVYYAQGFSVVLLGRPLFPETIEAWTHGPVVP 62
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+Y+++++F + I + P E +++ +++ Y +S +L+ + E
Sbjct: 63 ELYNKYRHFGPNVISKAQGGT----PDNLTTEEKTLIDDVFSVYGEYSASKLRNLTHNE- 117
Query: 133 KTWRRLYDPND 143
W + D
Sbjct: 118 TPWMEAENKED 128
>gi|146298679|ref|YP_001193270.1| phage-associated protein [Flavobacterium johnsoniae UW101]
gi|146153097|gb|ABQ03951.1| Uncharacterized phage-associated protein [Flavobacterium johnsoniae
UW101]
Length = 209
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 3/135 (2%)
Query: 13 YSTIAVANFFIDKGVKY-SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
Y+ + +AN I I +LK+Q+ +Y + K + D+ +AW+ GPV
Sbjct: 60 YNVVDIANKIIANINTEAGDLISNLKLQKLLYYMQGYYIAIFNKKLFDDVIEAWQYGPVV 119
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
+Y FK F S I + ++ I ++E + ++ +Y +S L + +E
Sbjct: 120 PTMYMHFKEFGSSAITISDEIKENIIRLNTDEE-ENLFNDVFEQYNQYSAIALMNMTHDE 178
Query: 132 NKTWRRLYDPNDPNT 146
K WR++++ N
Sbjct: 179 -KPWRQIFNANPKGE 192
>gi|319942310|ref|ZP_08016625.1| hypothetical protein HMPREF9464_01844 [Sutterella wadsworthensis
3_1_45B]
gi|319942641|ref|ZP_08016949.1| hypothetical protein HMPREF9464_02168 [Sutterella wadsworthensis
3_1_45B]
gi|319803820|gb|EFW00752.1| hypothetical protein HMPREF9464_02168 [Sutterella wadsworthensis
3_1_45B]
gi|319804183|gb|EFW01083.1| hypothetical protein HMPREF9464_01844 [Sutterella wadsworthensis
3_1_45B]
Length = 157
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 5/127 (3%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
P ++ V + +D K I ++ K+Q+ +Y + + Q + E PQAW+ GPVF
Sbjct: 10 PLDSLQVMAYIVDMCRKQHIEVNVTKLQKLLYCCYGVALAQLGIRLTKESPQAWQYGPVF 69
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
+YF HPIE + D S + A+ E+ +++ + S QL +
Sbjct: 70 PKT---LEYFRKHPIESLTDSS--VLESTASDELKKLLIGTLTYFGQFSASQLSTWSHQI 124
Query: 132 NKTWRRL 138
W R
Sbjct: 125 GSPWYRS 131
>gi|159029382|emb|CAO90758.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 195
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 66/147 (44%), Gaps = 9/147 (6%)
Query: 14 STIAVANFFIDKGVKYSI--PIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
+ VA +FI + + I + ++K+Q+ +Y + + + EE QAW+ GPV
Sbjct: 3 DCLTVARYFIIRAYEDGIDAEMTNMKVQKLLYYAQSLHLALYDEPLFKEEIQAWRYGPVC 62
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
Y + F++ + + S P E E++E IW + ++ +L ++ E
Sbjct: 63 PAAYKFYSDFEAKQLPIPRQESLSGLP----SEKKELLEEIWQYFGNYHAYRLSDMTHAE 118
Query: 132 NKTWRRLYD--PNDPNTNRTITVEEIT 156
W++ P + ++ I ++++
Sbjct: 119 -FPWKKARKGLPPEESSTEPILLDDMK 144
>gi|167465465|ref|ZP_02330554.1| putative prophage protein (ps3) [Paenibacillus larvae subsp. larvae
BRL-230010]
Length = 154
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 62/146 (42%), Gaps = 5/146 (3%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR 77
VA +FI + HLK+Q+ Y + +SM D+E +AW GPV +Y
Sbjct: 7 VAKYFIKYANSRRELLCHLKLQKLCYYAQAWYLAFFGESMFDDEFEAWVHGPVNYKLYLD 66
Query: 78 FKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRR 137
+K F PI+ + I + +++ +W +Y + L+ + E+ W++
Sbjct: 67 YKKFGWSPIKENTEG--FQEDSIFDDNQLHVLDQVWERYGRLDVKVLEALTHGED-PWKK 123
Query: 138 LY--DPNDPNTNRTITVEEITKMADG 161
NDP + I +++ G
Sbjct: 124 ARMLLENDPYSPAIIVKDDMMSFYRG 149
>gi|254424290|ref|ZP_05038008.1| hypothetical protein S7335_4449 [Synechococcus sp. PCC 7335]
gi|196191779|gb|EDX86743.1| hypothetical protein S7335_4449 [Synechococcus sp. PCC 7335]
Length = 148
Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 64/147 (43%), Gaps = 10/147 (6%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
S +A++FI + I +LK+Q+ +Y + + E+ QAW GPV
Sbjct: 2 SCFDIADYFIWLANETGSFISNLKLQKLVYYAQAWHIALYDDPLFAEDFQAWVHGPVIPS 61
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
+Y ++K F PI D +++ + ++ + +Y + +L+++ E
Sbjct: 62 LYQKYKTFGWQPILEDADPKLP-------EDVFQFLDEVAEEYFACDAYELEQMTHAE-A 113
Query: 134 TWR--RLYDPNDPNTNRTITVEEITKM 158
W R P+D ++N I E + +
Sbjct: 114 PWDWARGDLPSDASSNEVIKKEWMKEY 140
>gi|229111150|ref|ZP_04240707.1| hypothetical protein bcere0018_33970 [Bacillus cereus Rock1-15]
gi|228672314|gb|EEL27601.1| hypothetical protein bcere0018_33970 [Bacillus cereus Rock1-15]
Length = 155
Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 65/123 (52%), Gaps = 6/123 (4%)
Query: 14 STIAVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+ VA + I++ + I +LK+Q+ +Y + K+K++ +E+ +AW GPV
Sbjct: 3 KVMDVAKYLINQSRPGTQENITNLKLQKLLYYAQGFCLAIKEKALFEEDIEAWVHGPVVP 62
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
VY FK + + I+ I D + + K E ++++++W +QS+S + L+E+ E
Sbjct: 63 EVYSEFKGYTYNDIDGIYDENKIVLTK----EEIDLLDNMWKIFQSYSGKVLEEMTHNEE 118
Query: 133 KTW 135
W
Sbjct: 119 -PW 120
>gi|261416854|ref|YP_003250537.1| Uncharacterized phage-associated protein-like protein [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261373310|gb|ACX76055.1| Uncharacterized phage-associated protein-like protein [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|302327608|gb|ADL26809.1| conserved hypothetical protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 145
Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 63/147 (42%), Gaps = 11/147 (7%)
Query: 13 YSTIAVANFFIDKGVKYSIPI-DHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
Y + +A + K + + + +LK+Q+ +Y + + DE +AW GPV
Sbjct: 3 YKALQIAQLLLSKAAERNQELMSNLKLQKMLYYEQGFHLAAFDTPLFDENIEAWMFGPVV 62
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
VY ++ +D+ IE + ++ N+E + ++++ Y +S +L E+ E
Sbjct: 63 PEVYEKYAKYDAKGIEPPTQIDIKL-----NEEETTLFNNVFDVYNQYSAVKLVEMTHSE 117
Query: 132 NKTWRRLYDPNDPNTNRTITVEEITKM 158
W + P I+ E + K
Sbjct: 118 -PPWNSV----SPGKGNIISQESMKKF 139
>gi|300864260|ref|ZP_07109140.1| putative Similar to A0ZKW1_NODSP prophage protein [Oscillatoria sp.
PCC 6506]
gi|300337725|emb|CBN54286.1| putative Similar to A0ZKW1_NODSP prophage protein [Oscillatoria sp.
PCC 6506]
Length = 195
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 64/147 (43%), Gaps = 9/147 (6%)
Query: 14 STIAVANFFIDKGVKYSIP--IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
+ VA +FI + + I + ++K+Q+ +Y + + + EE QAW+ GPV
Sbjct: 3 DCLNVACYFIIRAYEDGIEAEMTNMKVQKLLYYAQSLHLALYNEPLFAEEIQAWRYGPVC 62
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
Y + F++ + + S FP E E++E IW + + +L ++ E
Sbjct: 63 PPAYRFYSDFEARQLPIPRKESLSDFP----SEKKELLEEIWEYFGGYHAYRLSDMTHGE 118
Query: 132 NKTWRRLYD--PNDPNTNRTITVEEIT 156
W+R P ++ I + ++
Sbjct: 119 -FPWKRARKGLPPQASSTEPILLNDMK 144
>gi|239621772|ref|ZP_04664803.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|239514963|gb|EEQ54830.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
Length = 159
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 53/151 (35%), Gaps = 4/151 (2%)
Query: 8 QTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQ 67
+ VAN + + + +K+Q+ ++ C + +L E Q W+
Sbjct: 1 MVGAGLTPTTVANSILRRAFGTDEHVTPMKLQKLLFFVTCLYQRYTGRRLLTESFQPWQY 60
Query: 68 GPVFVGVYHRFKYFDSHPIEVIMD---LSFRIFPKIANQEIGEIMESIWNKYQSHSTEQL 124
GPV VY FK F PI + ++ + + + +W S +L
Sbjct: 61 GPVCRSVYDEFKGFGGKPINRYAQDALGKVTAVDESSSPSLRKALNLVWENMGDLSAVKL 120
Query: 125 QEIVQEENKTWRR-LYDPNDPNTNRTITVEE 154
+ N W + + +NR + +
Sbjct: 121 SRVTHRPNSAWSQAVAGHKTFISNRAMAGDH 151
>gi|166368019|ref|YP_001660292.1| putative prophage protein [Microcystis aeruginosa NIES-843]
gi|166090392|dbj|BAG05100.1| putative prophage protein [Microcystis aeruginosa NIES-843]
Length = 195
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 64/147 (43%), Gaps = 9/147 (6%)
Query: 14 STIAVANFFIDKGVKYSI--PIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
+ VA +FI + + + + ++K+Q+ +Y + + + EE QAW+ GPV
Sbjct: 3 DCLTVARYFIIRAYEDGMDAEMTNMKVQKLLYYAQSLHLALYDEPLFKEEIQAWRYGPVC 62
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
Y + F++ + + P E E++ IW + ++ +L ++ E
Sbjct: 63 PAAYKFYSDFEAEQLPIPRQECLSGLP----SEKKELLAEIWQYFGNYHAYRLSDMTHAE 118
Query: 132 NKTWRRLYD--PNDPNTNRTITVEEIT 156
W++ P + ++ I ++++
Sbjct: 119 -FPWKKARKGLPPEESSTEPILLDDMK 144
>gi|119511541|ref|ZP_01630649.1| Putative prophage protein (ps3) [Nodularia spumigena CCY9414]
gi|119463776|gb|EAW44705.1| Putative prophage protein (ps3) [Nodularia spumigena CCY9414]
Length = 149
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 7/146 (4%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+S VAN+FI + I +LK+Q+ +Y + + + E+ QAW GPV
Sbjct: 5 FSCFNVANYFIWLANETGSFISNLKLQKLVYYAQAWHLALYETPLFPEDFQAWIHGPVIP 64
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+Y ++K F PI + + E+ E ++ + +Y + +L+++ +E
Sbjct: 65 VLYQKYKPFGWQPILQDANPELELP-----DEVREFLDELAEEYFACDAYELEQMTHDEE 119
Query: 133 KTWRRLYDP-NDPNTNRTITVEEITK 157
W+ + I ++ K
Sbjct: 120 -PWKWARGNLASDAPSNEIIKKDWMK 144
>gi|149908524|ref|ZP_01897186.1| possible prophage ps3 protein01-like protein [Moritella sp. PE36]
gi|149808358|gb|EDM68295.1| possible prophage ps3 protein01-like protein [Moritella sp. PE36]
Length = 145
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 10/148 (6%)
Query: 14 STIAVANFFIDKGVKYSIPI-DHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+ VA F I + I +LK+Q+ Y + K + D+E QAW GPV
Sbjct: 3 NVTDVAEFIIGLANRDDDDIITNLKLQKITYYAQGFYLALFDKPLFDDEIQAWAHGPVIP 62
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+YH++K + I + D F +A QE E + +++ + S +L+ + EE
Sbjct: 63 DLYHKYKINGKNHI--VSDAMFDAEKCLAEQE-REHLNDVYDIFGQFSAWKLRNMTHEE- 118
Query: 133 KTWRRLYDPNDPNTNRTITVEEITKMAD 160
W ++ + IT E+ + D
Sbjct: 119 APW-----IDNEKSANIITKTELKRYFD 141
>gi|47564893|ref|ZP_00235937.1| uncharacterized phage-associated protein [Bacillus cereus G9241]
gi|47558266|gb|EAL16590.1| uncharacterized phage-associated protein [Bacillus cereus G9241]
Length = 169
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 65/155 (41%), Gaps = 11/155 (7%)
Query: 6 FTQTNPPYSTIAVANFFIDKGVKYSIP---IDHLKIQQFIYLTHCDVVLQKKKSMLDEEP 62
+S VAN+F+++ S P + HLK+Q+ Y V ++ + E
Sbjct: 12 MVIGEAEHSVSQVANYFLNRSQNDSRPSTDVTHLKLQKLAYYAQAWHVTILRRRLFAERI 71
Query: 63 QAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTE 122
+AW GPV +Y ++++ I + + N+ ++ ++W Y +
Sbjct: 72 EAWVHGPVSPDLYSEYRHYGYQSIYGNI-----VQENQFNEPTLGVLNAVWITYGDKDAK 126
Query: 123 QLQEIVQEENKTWR--RLYDPNDPNTNRTITVEEI 155
+L+++ E W+ R P N I+VE +
Sbjct: 127 ELEKLTHSEE-PWKLARGNMPATMYGNNEISVEGM 160
>gi|307152153|ref|YP_003887537.1| putative phage-associated protein [Cyanothece sp. PCC 7822]
gi|306982381|gb|ADN14262.1| putative phage-associated protein [Cyanothece sp. PCC 7822]
Length = 155
Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 9/145 (6%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
S +A FFI + + +LK+Q+ +Y + + +E+ +AW GPV
Sbjct: 3 SCYKIAQFFIRYAHEAGSLLTNLKLQKLVYYAQAWHLAIHGSPLFEEDFEAWVHGPVIPE 62
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
+Y ++K + +PI +D E + + Y S+ +L+ + E
Sbjct: 63 LYQKYKQYKWNPISEDVDKPVLSEELEEFLEE------VIDVYFSYDAYELERMTHCE-A 115
Query: 134 TW--RRLYDPNDPNTNRTITVEEIT 156
W R P D +N IT E +
Sbjct: 116 PWIEARGAIPIDEPSNAIITKESMK 140
>gi|167461417|ref|ZP_02326506.1| putative phage-associated protein [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322383513|ref|ZP_08057287.1| hypothetical protein PL1_1439 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321152200|gb|EFX45032.1| hypothetical protein PL1_1439 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 249
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 22/167 (13%)
Query: 6 FTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAW 65
+ VA F + ++ + HLK+Q+ +Y + D +L K + E A+
Sbjct: 86 LIAEDQELKAYDVAKFIVS-----TVQVSHLKLQKLLYYVYADFLLATGKKLFKEPIVAF 140
Query: 66 KQGPVFVGVYHRFKYFDSHPIEVIMDLSFRI----------FPKIANQEIG----EIMES 111
+ GPV V+H++K S I+ D F I F ++A+ E G +
Sbjct: 141 EYGPVVEEVFHKYKVHGSSEIDYKEDEYFCIYTDEFAVTPSFMRVASSEHGIYAVGFILK 200
Query: 112 IWNKYQSHSTEQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKM 158
+ +KY+S+S +L + + W+R+Y N IT E I +
Sbjct: 201 VLDKYESYSAGELVKKTHQVGGPWKRVYVK---GMNYEITDELIKRY 244
>gi|228969638|ref|ZP_04130429.1| CDSE [Bacillus thuringiensis serovar sotto str. T04001]
gi|228790076|gb|EEM37867.1| CDSE [Bacillus thuringiensis serovar sotto str. T04001]
Length = 193
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 40/175 (22%), Positives = 77/175 (44%), Gaps = 11/175 (6%)
Query: 2 KKRTFTQTNPPYSTIAVANFFIDKGVKY-SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDE 60
K F + P S VAN+F+ I LK+Q+ + + + + DE
Sbjct: 29 KGGGFMKEKKP-SIYDVANYFLYLSSPGTPRSITPLKLQKLTFYAQALNYAMEGEPLFDE 87
Query: 61 EPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHS 120
+ +AW GPV +Y+ +K + S I+ S I ++++ +++ IW Y +
Sbjct: 88 DFEAWVHGPVSPELYYEYKNYGSREID-----SSTIMKPKLDKKVKNVIKIIWRMYGTKD 142
Query: 121 TEQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKMADGSNISPENVVEQIKK 175
+ L+ E K W++ + D + + E I K + + S + +V+Q K+
Sbjct: 143 GKYLENKTHNE-KPWQQARNGLDYYQH---SNEIIDKTSIKNYYSKKFIVKQTKQ 193
>gi|167648674|ref|YP_001686337.1| hypothetical protein Caul_4719 [Caulobacter sp. K31]
gi|167351104|gb|ABZ73839.1| uncharacterized phage-associated protein-like protein [Caulobacter
sp. K31]
Length = 166
Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 56/143 (39%), Gaps = 14/143 (9%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
Y + +AN F+ + + +Q+ Y+ H + ++ ++ +AW GPV
Sbjct: 3 YRAVEIANEFLRLPGAADR-LTQMHLQKLTYIAHGWNWAINNEPLIADDIEAWSFGPVVR 61
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRI-----------FPKIAN--QEIGEIMESIWNKYQSH 119
+Y K+F + PI ++ P A+ +++E +W +Y
Sbjct: 62 DLYEHTKFFGTQPIGRLISPDDSQVARFFGKTGDAAPYRADLTDRERQVIEQVWARYSGL 121
Query: 120 STEQLQEIVQEENKTWRRLYDPN 142
+ +L E+ + W + +
Sbjct: 122 NAIRLSELTHQPGTPWFQAFQRG 144
>gi|291520067|emb|CBK75288.1| Uncharacterized phage-associated protein [Butyrivibrio fibrisolvens
16/4]
Length = 140
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
YS + ++ + + + +K PI +L +Q+ +Y D + +K + +AW+ GPV
Sbjct: 2 YSAVDLSKYVVSRCIKKENPISNLHLQKILYYIQKDFLCKKGDIAFPDTIEAWQFGPVVP 61
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
VY+ F + + PI D+S +++ I+++I ++ +L + N
Sbjct: 62 IVYYYFCAYGAMPITDYYDVSI-------DEDDSFIIDTIIDEKCIKDPWELVAETHKPN 114
Query: 133 KTWRRLYDPNDPNTNRTITVEEITKM 158
W ++Y N + I +E I ++
Sbjct: 115 GAWDQVYK-NGNGNHNPIPIELIKEV 139
>gi|326560181|gb|EGE10569.1| phage-associated protein [Moraxella catarrhalis 7169]
gi|326565730|gb|EGE15892.1| phage-associated protein [Moraxella catarrhalis BC1]
Length = 170
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 8 QTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQ 67
PY+ I VAN+ + + ++ P+ HLK+Q+ +Y + K ++ E W+
Sbjct: 1 MIKAPYNPIDVANYIVAEAIRREKPVTHLKLQKLLYYVVAKYLQTHNKPLIAENVVKWQY 60
Query: 68 GPVFVGVYHRFKYFDSHPIEVI-----------------MDLSFRIFPKIANQEIGEIME 110
GPV VYH+FK S I + ++ + + E ++
Sbjct: 61 GPVVKSVYHQFKILGSLEITELCEYIESKDDKKLFSVKWANVDANVKTLENDPEFAKVAN 120
Query: 111 SIWNKYQSHSTEQLQEIVQEENKTWRR 137
++ + S S L +I E WR
Sbjct: 121 TVIDDLLSVSAFGLVDITHAE-AAWRN 146
>gi|154488282|ref|ZP_02029399.1| hypothetical protein BIFADO_01856 [Bifidobacterium adolescentis
L2-32]
gi|154083433|gb|EDN82478.1| hypothetical protein BIFADO_01856 [Bifidobacterium adolescentis
L2-32]
Length = 168
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 67/157 (42%), Gaps = 11/157 (7%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
++I VAN FI + I I +L + + +Y + + + K + +++ +AW GPV
Sbjct: 2 NSIQVANAFILR-HGSDIDITNLVLNKLVYFAQVESLRETGKPLFEDKIEAWSYGPVERD 60
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
VY F+ + + I + ++ +++ KY + L +N
Sbjct: 61 VYFTFQKYGRNRIPKPEGET------AKDERTLSVVDRTAKKYGFLTAFDLVGFSHRKNS 114
Query: 134 TWRRLYDPNDPNTNRTITVEEITKMADGSNISPENVV 170
W+ +Y + N IT ++I DG P+N +
Sbjct: 115 AWKNVYRKGE---NVEITNDDILASDDGLTF-PKNTL 147
>gi|332686858|ref|YP_004456632.1| phage protein [Melissococcus plutonius ATCC 35311]
gi|332370867|dbj|BAK21823.1| phage protein [Melissococcus plutonius ATCC 35311]
Length = 199
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 20/143 (13%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
PY I VA++ ID + I I++LK+Q+ +Y ++ +K + DE Q W+ GPV
Sbjct: 21 PYLAIYVADYIIDLCDQKGIEINNLKLQKIMYYLQARYLIDTEKPLFDENIQKWRYGPVI 80
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIAN-------------------QEIGEIMESI 112
VYH +K + I+ PK +E E++ +
Sbjct: 81 PSVYHEYKDKGAANIDKKDIGFIVRDPKENEVANFLGYYFKEEYTSEMIIKEDREVIGEV 140
Query: 113 WNKYQSHSTEQLQEIVQEENKTW 135
N + ++ L + E W
Sbjct: 141 VNALKDYTGFDLVKFTH-EQSIW 162
>gi|326565556|gb|EGE15722.1| phage-associated protein [Moraxella catarrhalis 103P14B1]
gi|326573356|gb|EGE23324.1| phage-associated protein [Moraxella catarrhalis 101P30B1]
Length = 217
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 58/149 (38%), Gaps = 15/149 (10%)
Query: 3 KRTFTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEP 62
K+ PY+ + VAN+ + + +K P+ HLK+Q+ +Y +++E+
Sbjct: 46 KKGVVMIKAPYNPMDVANYIVAEAIKREKPVTHLKLQKLLYYVVAKYAKTYNTILINEDI 105
Query: 63 QAWKQGPVFVGVYHRFKYFDSHPIEVIM--------------DLSFRIFPKIANQEIGEI 108
W+ GPV VYH FK I + D+ ++ + +
Sbjct: 106 VKWQYGPVVKSVYHYFKLHGDRIITKPIAYLESAEIFNLKFTDVDVNNAQLGNDKRLVDT 165
Query: 109 MESIWNKYQSHSTEQLQEIVQEENKTWRR 137
+ + N + +L E +E WR
Sbjct: 166 VGQVLNDTDLLTAYELVERTHKE-PAWRN 193
>gi|300867705|ref|ZP_07112350.1| putative Phage-associated protein [Oscillatoria sp. PCC 6506]
gi|300334288|emb|CBN57522.1| putative Phage-associated protein [Oscillatoria sp. PCC 6506]
Length = 151
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 14 STIAVANFFIDKGVKY-SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
S + VA +F+ + + I LK+Q+ +Y ++ + + + E+ QAW GP
Sbjct: 3 SALDVARYFLYRVDRDAGDTISPLKLQKLVYYAQAWSLVLRDQPLFYEDIQAWVHGPAIY 62
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
V+ +K + I + + E++E +WN Y S ++L+++ E
Sbjct: 63 EVWDTYKDYRYGAIPEPEEELPEFE-----DDEIEVLEEVWNAYGELSAKRLEDLTHSEE 117
Query: 133 KTWRRLYDPNDPN--TNRTITVEEIT 156
W +P +++ I+ E++
Sbjct: 118 -PWINARKGLEPAQKSSKVISHEDMK 142
>gi|326559800|gb|EGE10206.1| phage-associated protein [Moraxella catarrhalis 46P47B1]
Length = 239
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 58/149 (38%), Gaps = 15/149 (10%)
Query: 3 KRTFTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEP 62
++ PY+ I VAN+ + + VK P+ HLK+Q+ +Y +++E+
Sbjct: 68 EKGVVMIKAPYNPIDVANYIVAEAVKREKPVTHLKLQKLLYYVVAKYAKTYNTILINEDI 127
Query: 63 QAWKQGPVFVGVYHRFKYFDSHPIEVIM--------------DLSFRIFPKIANQEIGEI 108
W+ GPV VYH FK I + D+ ++ + +
Sbjct: 128 VKWQYGPVVKSVYHYFKLHGDRIITKPIAYLESAEIFNLKFTDVDANNAQLGNDKRLVDA 187
Query: 109 MESIWNKYQSHSTEQLQEIVQEENKTWRR 137
+ + N + +L E +E WR
Sbjct: 188 VGQVLNDTDLLTAYELVERTHKE-PAWRN 215
>gi|153869744|ref|ZP_01999277.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152073781|gb|EDN70714.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 144
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 14 STIAVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+ VANFFI KG+ I +LK+Q+ +Y ++++ E AW GPV
Sbjct: 3 TAQDVANFFIMKGIDDEESGISNLKLQKLLYYAKGFHQAIFEEALFPENLWAWTYGPVVP 62
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+Y +K + PI + F ++E E++ +W+ + S +L+++ E
Sbjct: 63 EMYQAYKQYGKDPITQVEYDPTHRF----DEEQLELLNEVWSTFGQFSAWKLRDMTHNE- 117
Query: 133 KTW 135
K W
Sbjct: 118 KPW 120
>gi|119512866|ref|ZP_01631932.1| Putative prophage protein (ps3) [Nodularia spumigena CCY9414]
gi|119462494|gb|EAW43465.1| Putative prophage protein (ps3) [Nodularia spumigena CCY9414]
Length = 195
Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 65/147 (44%), Gaps = 9/147 (6%)
Query: 14 STIAVANFFIDKGVKYSIP--IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
+ + A +FI + + I + ++K+Q+ +Y + + + + DEE QAW+ GPV
Sbjct: 3 NCLDAARYFIARAYEDGIEAEMTNMKVQKLLYYSQSLYLAVYDQPLFDEEIQAWRYGPVC 62
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
Y + F++ + + P Q ++E IW + + +L ++ E
Sbjct: 63 PPAYRFYSEFEAQQLPIPSQELLLQIP----QNEKRLLEEIWGYFGGYHAYRLSDMTHLE 118
Query: 132 NKTWRRLYD--PNDPNTNRTITVEEIT 156
W++ P + ++ I +E++
Sbjct: 119 -FPWKKARQGLPPNASSTEPILLEDMK 144
>gi|84390146|ref|ZP_00991408.1| Uncharacterized phage-associated protein [Vibrio splendidus 12B01]
gi|84376800|gb|EAP93675.1| Uncharacterized phage-associated protein [Vibrio splendidus 12B01]
Length = 155
Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 66/146 (45%), Gaps = 11/146 (7%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
YS + V+ + + +L++++ Y+ H + ++ ++ ++ AW+ GP+
Sbjct: 7 YSAVDVSLSLLKHAYEQGKCFSNLQLEKLTYVCHGLSLAHFQRPLVIDDVFAWRFGPLVP 66
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
VY RFK + + I D+ + + E I++ + ++ + QL E+ +
Sbjct: 67 SVYFRFKSYGVNVITEQGDV-------VLDAESESIVKDVVSQLGHLTGPQLMELTHRDG 119
Query: 133 KTWRRLYDPNDPNTNRTITVEEITKM 158
W +++D T++ + + + +
Sbjct: 120 SPWHQVWD----GTHQKVIPDHLIQS 141
>gi|320536603|ref|ZP_08036624.1| conserved domain protein [Treponema phagedenis F0421]
gi|320146547|gb|EFW38142.1| conserved domain protein [Treponema phagedenis F0421]
Length = 139
Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 66/141 (46%), Gaps = 8/141 (5%)
Query: 15 TIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+ VA + I++ PI +L++Q+ +Y + + + D+ +AW+ GPV V
Sbjct: 3 AMVVAQYIINRCTIEGNPISNLQLQKILYYVQVACLQELGEPCFDDPIEAWQFGPVVRAV 62
Query: 75 YHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKT 134
Y+++ F + PI+ D I++ I++++ ++ ++ L K
Sbjct: 63 YYQYCGFGAFPIDWEYD------SIISDSRKKTIIDTVIDEKKNLPPWALVFDDYSPGKA 116
Query: 135 WRRLYDPNDPNTNRTITVEEI 155
W R+Y N P TI++ ++
Sbjct: 117 WSRVYKNNSPKA--TISLRDM 135
>gi|315575459|gb|EFU87650.1| conserved hypothetical protein [Enterococcus faecalis TX0309B]
gi|315580100|gb|EFU92291.1| conserved hypothetical protein [Enterococcus faecalis TX0309A]
Length = 254
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 21/165 (12%)
Query: 6 FTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAW 65
+++ + +A FF+ G + +LK+Q+ IY ++ +++ K + DE A+
Sbjct: 87 MLESDKKIDVMDIAKFFLSFG-----SLTNLKLQKLIYFSYATHLVRTGKKLFDEPIVAF 141
Query: 66 KQGPVFVGVYHRFKYFDSHPIEVIMDLSF-------------RIFPKIANQEIGEIMESI 112
K GPV VYH +K F I + D +I ++ EI + +
Sbjct: 142 KYGPVVKDVYHIYKDFGRESINIEDDGPKFHISEFSIPVSLAKIALNESSSEILLTLTEV 201
Query: 113 WNKYQSHSTEQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITK 157
Y + +L I W Y + I +E+ K
Sbjct: 202 IESYWDKTASKLVNISHVAGGPWDHAYKDGK---HDVIITDELIK 243
>gi|227487241|ref|ZP_03917557.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227541589|ref|ZP_03971638.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227092899|gb|EEI28211.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227182557|gb|EEI63529.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51866]
Length = 177
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 61/149 (40%), Gaps = 7/149 (4%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
PYS VAN + + K + +K+Q+ +Y + + +L+ W GPV
Sbjct: 19 PYSPTVVANNILARAFKEKLYPTPMKLQKILYFVSSQYIKKTGHPLLESPFLTWAYGPVV 78
Query: 72 VGVYHRFKYFDSHPIEVIMD---LSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIV 128
VY F+ F + I+ I + ++ + E + +W + L +I
Sbjct: 79 YTVYDEFRPFSKNGIKRYARDAAGQSYIVDENEDRALAESLSEVWEATKYRGAVDLSKIT 138
Query: 129 QEENKTWRRLYDPNDPNTNRTITVEEITK 157
+E+ W + Y + T++ E++ +
Sbjct: 139 HKESSAWDKAYQRGED----TLSWEDVKQ 163
>gi|19551563|ref|NP_599565.1| uncharacterized phage-associated protein [Corynebacterium
glutamicum ATCC 13032]
gi|62389211|ref|YP_224613.1| phage-associated protein [Corynebacterium glutamicum ATCC 13032]
gi|21323078|dbj|BAB97707.1| Uncharacterized phage-associated protein [Corynebacterium
glutamicum ATCC 13032]
gi|41324544|emb|CAF18884.1| putative phage-associated protein [Corynebacterium glutamicum ATCC
13032]
Length = 148
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 57/130 (43%), Gaps = 2/130 (1%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
S +A +F+ G + + LK+Q+ +Y + + + + + ++ AW+ GPV G
Sbjct: 5 SAREIAEWFVAWGDELDAEVSPLKLQKLLYYSQGEHIAATGRKLFSDKILAWQHGPVTPG 64
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
VY K + +PI+ + F ++ + + ++W KY +S L+E E
Sbjct: 65 VYSDTKSYGRNPID-PDEFVSDEFNWDDYSDVSDELVTVWRKYGIYSAWALREKTHSE-S 122
Query: 134 TWRRLYDPND 143
W +
Sbjct: 123 PWLDAWAQGQ 132
>gi|291529520|emb|CBK95106.1| Uncharacterized phage-associated protein [Eubacterium rectale
M104/1]
Length = 144
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
Y + ++ + I+K V +IPI ++++Q+ +Y + + KK M +E +AW GPV
Sbjct: 2 YKALDISKYIINKCVNDNIPISNMQLQKILYCIQRECLQLYKKEMFVDEIEAWPFGPVIP 61
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
VY+ + F ++PI + R I+N ++ ++ K + L E V +
Sbjct: 62 EVYYMYCGFGANPIRIRSAADCR--NNISNADLV-LINYTVEKIRILKPWNLTEDVHRKG 118
Query: 133 KTWRRLYDPNDPNTNRTITVEEITK 157
+ +YD N +R I + I K
Sbjct: 119 HAYDIIYD-NGLGNHRVIPKDLIKK 142
>gi|168206179|ref|ZP_02632184.1| prophage ps3 protein 01 [Clostridium perfringens E str. JGS1987]
gi|170662328|gb|EDT15011.1| prophage ps3 protein 01 [Clostridium perfringens E str. JGS1987]
Length = 141
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
Y+ +A + +D ++ P+ +LK+Q+ +Y +++K + +EE + W+ GPV
Sbjct: 3 YNVKDIAAYIVDYSIENGCPVSNLKLQKILYYVQAYFLIKKNEPCFEEEIECWRHGPVVR 62
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
VY +K + + I ++ D K + ++ + + Y+ +S ++ + +E+
Sbjct: 63 EVYSEYKKYFNDNIFMVEDY------KEIEERDCNLINQVVDSYRKYSPWEMVDKTHQED 116
Query: 133 KTW 135
W
Sbjct: 117 -PW 118
>gi|317479190|ref|ZP_07938326.1| hypothetical protein HMPREF1007_01442 [Bacteroides sp. 4_1_36]
gi|316904634|gb|EFV26452.1| hypothetical protein HMPREF1007_01442 [Bacteroides sp. 4_1_36]
Length = 151
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
YS + +A++F+ + +K IPI ++ + + IY H K K ++D+ AW GPV
Sbjct: 2 YSGLVIADYFVRECLKKRIPITNMSVLKMIYFAHGFYYALKGKKLVDDPFYAWPWGPVEK 61
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKI-ANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
Y FK + S PI D + + K+ A++++ + + L + E
Sbjct: 62 KTYDCFKKYVSSPIIATSDTTDKELAKLDADKDLTSFLNQFLPL-ANIDPFLLSQKSHEA 120
Query: 132 NKTWRRL 138
W
Sbjct: 121 GGPWAVT 127
>gi|229817872|ref|ZP_04448154.1| hypothetical protein BIFANG_03158 [Bifidobacterium angulatum DSM
20098]
gi|229784772|gb|EEP20886.1| hypothetical protein BIFANG_03158 [Bifidobacterium angulatum DSM
20098]
Length = 168
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 63/157 (40%), Gaps = 11/157 (7%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+I VAN FI + I I +L + + +Y + + + K + +++ +AW GPV
Sbjct: 2 KSIQVANAFILR-HGSDIDITNLVLNKLVYFAQVESLRETGKPLFEDKIEAWPYGPVEKN 60
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
VY F+ + + I ++ +++ KY + L +N
Sbjct: 61 VYFAFQKYGRNRIPKPEGEV------TKDERTLSVVDRTARKYGFLTAFDLVGFSHRKNS 114
Query: 134 TWRRLYDPNDPNTNRTITVEEITKMADGSNISPENVV 170
W+ +Y N IT + I DG P+N +
Sbjct: 115 AWKNVYR---EGENVEITNDAILASDDGLTF-PKNTL 147
>gi|294783258|ref|ZP_06748582.1| phage-associated protein [Fusobacterium sp. 1_1_41FAA]
gi|294480136|gb|EFG27913.1| phage-associated protein [Fusobacterium sp. 1_1_41FAA]
Length = 152
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 66/148 (44%), Gaps = 3/148 (2%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
Y + +A + I K + I +L++Q+ ++ + + ++ + +AW+ GPV
Sbjct: 3 KYDALDIAKYIIRWCDKNKLRITNLQLQKILFFIQKESIRKRGYGIFSNRIEAWQYGPVV 62
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPK-IANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
V+++F F + + + DL + PK I + + EI+E I +Y S L
Sbjct: 63 PDVFYQFAGFGAMKLVLYEDLFSDVSPKDIIDDQSKEIIEGILREYIHVSPWDLVAKSHV 122
Query: 131 ENKTWRRLYDPND--PNTNRTITVEEIT 156
N W + P T++ I+ E +
Sbjct: 123 SNGAWANSISMGEKYPITDQDISYEILK 150
>gi|186701742|ref|ZP_02553389.2| conserved hypothetical protein [Ureaplasma parvum serovar 6 str.
ATCC 27818]
gi|186701012|gb|EDU19294.1| conserved hypothetical protein [Ureaplasma parvum serovar 6 str.
ATCC 27818]
Length = 157
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKS-------MLDEEPQAWK 66
+ + VAN+F+ K + K+Q+ +Y + + + + DE+ +AW
Sbjct: 5 TPLIVANWFLTK-----ESMTPKKVQKLVYYAYSWYLTLMNEKVDDLKNKLFDEKIKAWV 59
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQE 126
GP +Y+ FK + I I D + + N + +I+ +W++Y +S QL+
Sbjct: 60 HGPAIPMLYNEFKEHKYNSIPKINDFNE---LEYFNLDTIDILNQVWDEYGHYSANQLES 116
Query: 127 IVQEENKTWRRLYDPNDP--NTNRTITVEEI 155
I +E+ W + P + N I+ +EI
Sbjct: 117 ITHQED-PWIKARKGFGPLDSCNAVISDKEI 146
>gi|153869049|ref|ZP_01998748.1| phage-associated protein [Beggiatoa sp. PS]
gi|152074402|gb|EDN71261.1| phage-associated protein [Beggiatoa sp. PS]
Length = 144
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 62/126 (49%), Gaps = 6/126 (4%)
Query: 14 STIAVANFFIDKGVKY-SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+ VA +F+ + + I +LK+Q+ +Y + + + E +AW GPV
Sbjct: 3 NCYDVARYFLAQVDEDAGDLISNLKLQKLVYYAQGINLALHELPLFPETLEAWIHGPVVP 62
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+++ ++ ++++ I DL F I+ N +I E+++ ++ + +S +L ++ EE
Sbjct: 63 VLFYTYQRYNANAIPPPNDLDFSIY----NSQIRELLDEVYVVFGQYSAWKLYQMTHEE- 117
Query: 133 KTWRRL 138
W+
Sbjct: 118 PPWKNT 123
>gi|322382660|ref|ZP_08056525.1| hypothetical protein PL1_2573 [Paenibacillus larvae subsp. larvae
B-3650]
gi|322384063|ref|ZP_08057784.1| hypothetical protein PL1_2192 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321151236|gb|EFX44532.1| hypothetical protein PL1_2192 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321153375|gb|EFX45797.1| hypothetical protein PL1_2573 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 162
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 61/147 (41%), Gaps = 11/147 (7%)
Query: 17 AVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYH 76
VA F+ + K+Q+ Y + + +K + D+ +AW GPV +Y
Sbjct: 20 DVAKAFLRL-----ESMTPKKLQKLCYYAYSFYLAIYEKKLFDDNFEAWVHGPVNPQLYT 74
Query: 77 RFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWR 136
++ + I ++ I N+ + EI+E ++ Y QL+ + ++E+ W+
Sbjct: 75 EYREYGWQEIPQEINYPNSIM---KNERVREIIEEVYESYGHLDGSQLEYLTRQED-PWK 130
Query: 137 RLYDPNDP--NTNRTITVEEITKMADG 161
+ P ++ I E+I G
Sbjct: 131 NARNRLQPYESSRNVIDDEDIRSYYVG 157
>gi|167461419|ref|ZP_02326508.1| putative prophage protein (ps3) [Paenibacillus larvae subsp. larvae
BRL-230010]
Length = 160
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 61/147 (41%), Gaps = 11/147 (7%)
Query: 17 AVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYH 76
VA F+ + K+Q+ Y + + +K + D+ +AW GPV +Y
Sbjct: 18 DVAKAFLRL-----ESMTPKKLQKLCYYAYSFYLAIYEKKLFDDNFEAWVHGPVNPQLYT 72
Query: 77 RFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWR 136
++ + I ++ I N+ + EI+E ++ Y QL+ + ++E+ W+
Sbjct: 73 EYREYGWQEIPQEINYPNSIM---KNERVREIIEEVYESYGHLDGSQLEYLTRQED-PWK 128
Query: 137 RLYDPNDP--NTNRTITVEEITKMADG 161
+ P ++ I E+I G
Sbjct: 129 NARNRLQPYESSRNVIDDEDIRSYYVG 155
>gi|253682420|ref|ZP_04863217.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
gi|253562132|gb|EES91584.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
Length = 335
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 63/141 (44%), Gaps = 11/141 (7%)
Query: 17 AVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYH 76
+V + + K + I L +Q+ +Y + + + + + +AW GPV+ +YH
Sbjct: 170 SVVKYILYKC----VDITPLALQKLLYYCQGFYKVFNGEYLFNNDCEAWVHGPVYKSIYH 225
Query: 77 RFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWR 136
+K + +PIE ++ + +I EI+++I +S + L++I E WR
Sbjct: 226 EYKNYGYNPIEENIEFNHGELTEIE----REIIDNIIINLGCYSGKILEKITHSE-MPWR 280
Query: 137 RLYD--PNDPNTNRTITVEEI 155
+ ++R I E I
Sbjct: 281 TTRKGLDANELSDRIINKELI 301
>gi|225351691|ref|ZP_03742714.1| hypothetical protein BIFPSEUDO_03288 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225158035|gb|EEG71318.1| hypothetical protein BIFPSEUDO_03288 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 168
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 65/157 (41%), Gaps = 11/157 (7%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+I VAN FI + I I +L + + +Y + + K + +++ +AW GPV
Sbjct: 2 KSIQVANAFILR-HGSDIDITNLVLNKLVYFAQVESLRATGKPLFEDKIEAWPYGPVERN 60
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
VY F+ + + I + +++ +++ KY + L +N
Sbjct: 61 VYFTFQKYGRNRILKPEGET------AKDEQALSVVDGTAKKYGFLTAFDLVRFSHRKNS 114
Query: 134 TWRRLYDPNDPNTNRTITVEEITKMADGSNISPENVV 170
W+ +Y + N IT + I DG P+N +
Sbjct: 115 AWKNVYREEE---NVEITNDAILASDDGLTF-PKNTL 147
>gi|195867386|ref|ZP_03079390.1| cdse [Ureaplasma urealyticum serovar 9 str. ATCC 33175]
gi|195660862|gb|EDX54115.1| cdse [Ureaplasma urealyticum serovar 9 str. ATCC 33175]
Length = 157
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 71/151 (47%), Gaps = 18/151 (11%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKS-------MLDEEPQAWK 66
+ + VAN+F+ K + K+Q+ +Y + ++ + + DE+ +AW
Sbjct: 5 TPLIVANWFLTK-----ESMTLKKVQKLVYYAYSWYLILMNEKVDDLKNKLFDEKIKAWV 59
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQE 126
GP +Y+ FK + I I D + + + N + +I+ +W++Y +S QL+
Sbjct: 60 HGPAIPMLYNEFKEHKYNSIPKINDFNEQ---EYFNLDTIDILNQVWDEYGHYSANQLES 116
Query: 127 IVQEENKTWRRLYDPNDP--NTNRTITVEEI 155
I +E+ W + P + N TI+ +EI
Sbjct: 117 ITHQED-PWIKARKGFGPLDSCNETISDKEI 146
>gi|171920661|ref|ZP_02695533.2| conserved hypothetical protein [Ureaplasma urealyticum serovar 13
str. ATCC 33698]
gi|188524188|ref|ZP_02557555.2| conserved hypothetical protein [Ureaplasma urealyticum serovar 12
str. ATCC 33696]
gi|198273404|ref|ZP_03205940.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 4
str. ATCC 27816]
gi|171903394|gb|EDT49683.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 13
str. ATCC 33698]
gi|195660086|gb|EDX53466.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 12
str. ATCC 33696]
gi|198249924|gb|EDY74704.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 4
str. ATCC 27816]
Length = 157
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 71/151 (47%), Gaps = 18/151 (11%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKS-------MLDEEPQAWK 66
+ + VAN+F+ K + K+Q+ +Y + ++ + + DE+ +AW
Sbjct: 5 TPLIVANWFLTK-----ESMTLKKVQKLVYYAYSWYLILMNEKVDDLKNKLFDEKIKAWV 59
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQE 126
GP +Y+ FK + I I D + + + N + +I+ +W++Y +S QL+
Sbjct: 60 HGPAIPMLYNEFKKHKYNSIPKINDFNEQ---EYFNLDTIDILNQVWDEYGHYSANQLES 116
Query: 127 IVQEENKTWRRLYDPNDP--NTNRTITVEEI 155
I +E+ W + P + N TI+ +EI
Sbjct: 117 ITHQED-PWIKARKGFGPLDSCNETISDKEI 146
>gi|185178710|ref|ZP_02554581.2| conserved hypothetical protein [Ureaplasma urealyticum serovar 5
str. ATCC 27817]
gi|188024436|ref|ZP_02570664.2| conserved hypothetical protein [Ureaplasma urealyticum serovar 7
str. ATCC 27819]
gi|225551416|ref|ZP_03772362.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 8
str. ATCC 27618]
gi|184209305|gb|EDU06348.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 5
str. ATCC 27817]
gi|188018729|gb|EDU56769.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 7
str. ATCC 27819]
gi|225379231|gb|EEH01596.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 8
str. ATCC 27618]
Length = 157
Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 71/151 (47%), Gaps = 18/151 (11%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKS-------MLDEEPQAWK 66
+ + VAN+F+ K + K+Q+ +Y + + + + DE+ +AW
Sbjct: 5 TPLIVANWFLTK-----ESMTLKKVQKLVYYAYSWYLTLMNEKVDDLKNKLFDEKIKAWV 59
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQE 126
GP +Y+ FK + + I I D + + + N + +I+ +W++Y +S QL+
Sbjct: 60 HGPAIPMLYNEFKEYKYNSIPKINDFNEQ---EYFNLDTIDILNQVWDEYGHYSANQLES 116
Query: 127 IVQEENKTWRRLYDPNDP--NTNRTITVEEI 155
I +E+ W + +P + N I+ +EI
Sbjct: 117 ITHQED-PWIKARKGFEPLDSCNAVISDKEI 146
>gi|16271827|ref|NP_438164.1| hypothetical protein phiNIH1.1_51 [Temperate phage phiNIH1.1]
gi|19746216|ref|NP_607352.1| hypothetical protein spyM18_1241 [Streptococcus pyogenes MGAS8232]
gi|21910743|ref|NP_665011.1| hypothetical protein SpyM3_1207 [Streptococcus pyogenes MGAS315]
gi|28876321|ref|NP_795600.1| hypothetical protein SpyM3_1207 [Streptococcus pyogenes phage
315.4]
gi|28895567|ref|NP_801917.1| hypothetical protein SPs0655 [Streptococcus pyogenes SSI-1]
gi|71903887|ref|YP_280690.1| phage protein [Streptococcus pyogenes MGAS6180]
gi|94990811|ref|YP_598911.1| phage protein [Streptococcus pyogenes MGAS10270]
gi|139473391|ref|YP_001128107.1| hypothetical protein SpyM50531 [Streptococcus pyogenes str.
Manfredo]
gi|16156219|gb|AAL15093.1| hypothetical protein-phage associated [temperate phage PhiNIH1.1]
gi|19748400|gb|AAL97851.1| hypothetical phage protein [Streptococcus pyogenes MGAS8232]
gi|21904947|gb|AAM79814.1| conserved hypothetical protein - phage-associated [Streptococcus
pyogenes MGAS315]
gi|28810816|dbj|BAC63750.1| hypothetical protein (phage associated) [Streptococcus pyogenes
SSI-1]
gi|71802982|gb|AAX72335.1| phage protein [Streptococcus pyogenes MGAS6180]
gi|94544319|gb|ABF34367.1| phage protein [Streptococcus pyogenes MGAS10270]
gi|134271638|emb|CAM29869.1| hypothetical phage protein [Streptococcus pyogenes str. Manfredo]
Length = 174
Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 20/162 (12%)
Query: 15 TIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+ VAN+ I+ K I++LK+Q+ +Y + +L+ + +E + WK GPV V
Sbjct: 3 ALFVANYIIEYSNKKGYKINNLKLQKLLYFVNVRNILENGAPLFEESMEKWKYGPVVPDV 62
Query: 75 YHRFKYFDSHPIE------VIMDLSFRIFPKIANQEIGE----------IMESIWNKYQS 118
YH +K F + I ++ S F ++++ EI E ++E+ +
Sbjct: 63 YHEYKRFGAFSISTDEMIMEYVEFSVSPFGELSDLEITEYDSQKVENTQLIENTVDALHG 122
Query: 119 HSTEQLQEIVQEENKTWRRLYDPNDPNTNRTI--TVEEITKM 158
+L +I ++ W++ Y+ + + I T+EEI
Sbjct: 123 FGPFELVDITH-DHTPWKK-YEDRIMDGVQGIKYTIEEIKDF 162
>gi|257059424|ref|YP_003137312.1| phage-associated protein [Cyanothece sp. PCC 8802]
gi|256589590|gb|ACV00477.1| uncharacterized phage-associated protein [Cyanothece sp. PCC 8802]
Length = 196
Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 14 STIAVANFFIDKGVKYSIP--IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
S + VA +FI + + I ++K+Q+ +Y T C + + + EE QAW+ GPV
Sbjct: 3 SPLEVAKYFIIRAYEEGRENHITNMKVQKLLYYTQCLHLALYNEPLFAEEIQAWRYGPVC 62
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
Y + F++ + + + QE +++E +W + + L ++ E
Sbjct: 63 PPAYRFYSEFEAQQLPIPTQNKL----ETLTQEKLDLLEEVWQYFGEYHAYYLSDMTHLE 118
Query: 132 NKTWRRLYD--PNDPNTNRTITVEEI 155
W++ + ++ I +E++
Sbjct: 119 -FPWKKARAGLSSYESSTNPILLEDM 143
>gi|209559953|ref|YP_002286425.1| phage-associated protein [Streptococcus pyogenes NZ131]
gi|209541154|gb|ACI61730.1| Uncharacterized phage-associated protein [Streptococcus pyogenes
NZ131]
Length = 174
Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 20/162 (12%)
Query: 15 TIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+ VAN+ I+ K I++LK+Q+ +Y + +L+ + +E + WK GPV V
Sbjct: 3 ALFVANYIIEYSNKKGYKINNLKLQKLLYFVNVRNILENGTPLFEESMEKWKYGPVVPDV 62
Query: 75 YHRFKYFDSHPIE------VIMDLSFRIFPKIANQEIGE----------IMESIWNKYQS 118
YH +K F + I ++ S F ++++ EI E ++E+ +
Sbjct: 63 YHEYKRFGAFSISTDEMIMEYVEFSVSPFGELSDLEITEYDSQKVENTQLIENTVDALHG 122
Query: 119 HSTEQLQEIVQEENKTWRRLYDPNDPNTNRTI--TVEEITKM 158
+L +I ++ W++ Y+ + + I T+EEI
Sbjct: 123 FGPFELVDITH-DHTPWKK-YEDRIMDGVQGIKYTIEEIKDF 162
>gi|227501664|ref|ZP_03931713.1| possible phage-associated protein [Corynebacterium accolens ATCC
49725]
gi|227077689|gb|EEI15652.1| possible phage-associated protein [Corynebacterium accolens ATCC
49725]
Length = 149
Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 63/154 (40%), Gaps = 14/154 (9%)
Query: 13 YSTIAVANFFIDKGVK-YSIPIDHLKIQQFIYLTHCDVV-LQKKKSMLDEEPQAWKQGPV 70
++ +A + + + + LKIQ+ +Y + + +E +AW GPV
Sbjct: 4 FTARQIAEWLVAWAEETEEADLTPLKIQKLLYYAKGLYMRASGGVPLFNERMEAWAHGPV 63
Query: 71 FVGVYHRFKYFDSHPIE----VIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQE 126
V +YH K + PI+ + D ++ + + + + +WNKY +S L+
Sbjct: 64 VVDIYHELKKYGKSPIDPDTFISDDFNWDDYRPVEDT-----LIEVWNKYGPYSAWALRN 118
Query: 127 IVQEENKTWRRLYDPNDPNTNRTITVEEITKMAD 160
E W++ + + I+ ++ + D
Sbjct: 119 KTHTE-SPWKKNFVEEERG--LEISDADLKEYFD 149
>gi|171920265|ref|ZP_02690891.2| conserved hypothetical protein [Ureaplasma parvum serovar 1 str.
ATCC 27813]
gi|171902669|gb|EDT48958.1| conserved hypothetical protein [Ureaplasma parvum serovar 1 str.
ATCC 27813]
Length = 157
Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 71/151 (47%), Gaps = 18/151 (11%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKS-------MLDEEPQAWK 66
+ + VAN+F+ K + K+Q+ +Y + + + + DE+ +AW
Sbjct: 5 TPLIVANWFLTK-----ESMTPKKVQKLVYYAYSWYLTLMNEKVDDLKNKLFDEKIKAWV 59
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQE 126
GP +Y+ FK + + I I D + + + N + +I+ +W++Y +S QL+
Sbjct: 60 HGPAIPMLYNEFKEYKYNSIPKINDFNEQ---EYFNLDTIDILNQVWDEYGHYSANQLES 116
Query: 127 IVQEENKTWRRLYDPNDP--NTNRTITVEEI 155
I +E+ W + +P + N I+ +EI
Sbjct: 117 ITHQEDL-WIKARKGFEPLDSCNAVISDKEI 146
>gi|157964587|ref|YP_001499411.1| Phage-associated protein [Rickettsia massiliae MTU5]
gi|157844363|gb|ABV84864.1| Phage-associated protein [Rickettsia massiliae MTU5]
Length = 207
Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats.
Identities = 40/178 (22%), Positives = 76/178 (42%), Gaps = 16/178 (8%)
Query: 14 STIAVANFFIDKGVKY-SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
S VAN+F+ + I LK+Q+ IY + K + +EE +AWK GPV
Sbjct: 11 SCFDVANYFLVLVDREAGDSITQLKLQKLIYFAQGIHLALFDKVLFEEEIKAWKHGPVVP 70
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+ F F + I + ++ F I+ ++ +++ +++ Y HS L+ + +
Sbjct: 71 ALRSIFGSFRDNVIPLPGEIDFAIY----TEQQKKLLHKVYSFYGEHSAAYLRNLTHR-H 125
Query: 133 KTWRRLYDPNDPNTNRTITVEEITKMADGSNISPENVVEQIKKPVRFDSDSEFATLES 190
W + D IT E+I + N++ IK + + + A +E+
Sbjct: 126 SIWYEAIEKAD----NIITKEKIKEFFKA------NIINDIKDYILSITKEDIAQIEN 173
>gi|307271322|ref|ZP_07552601.1| hypothetical protein HMPREF9514_00077 [Enterococcus faecalis
TX0855]
gi|306512071|gb|EFM81062.1| hypothetical protein HMPREF9514_00077 [Enterococcus faecalis
TX0855]
Length = 182
Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 20/145 (13%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
PY + VA++ ID K+ I I++LK+Q+ +Y +++ + ++DEE Q WK GPV
Sbjct: 4 PYLAMYVADYIIDYCNKHDIEINNLKLQKVMYYLQAKSLVETNEPLIDEELQKWKYGPVV 63
Query: 72 VGVYHRFKYFDS--------HPIEVIMDLSFRI-----------FPKIANQEIGEIMESI 112
VYH +K + PI ++ + P++ Q+ + +
Sbjct: 64 PTVYHEYKNNGAGNIGISDIGPILRKARVNEKANFLGRYVQEEYSPELIEQDDRNSINEV 123
Query: 113 WNKYQSHSTEQLQEIVQEENKTWRR 137
N ++ +L + W+
Sbjct: 124 VNSLSDYTGFELVNETHG-HSIWKN 147
>gi|315168861|gb|EFU12878.1| conserved hypothetical protein [Enterococcus faecalis TX1341]
Length = 151
Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 64/151 (42%), Gaps = 17/151 (11%)
Query: 10 NPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDE-EPQAWKQG 68
N YS +A++F++K + K+Q+ Y S++D+ E QAW G
Sbjct: 2 NKKYSIFEIADWFLNK-----ESMTPKKLQKLCYYAQAWNNALLDDSIIDDSEFQAWAHG 56
Query: 69 PVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIV 128
PV +Y++++ + + I P + + +++ES+W Y S +L+ +
Sbjct: 57 PVSPELYNKYREYRWNSIPK------CTSPAAIDNQTVDVLESVWITYGDKSANELEALT 110
Query: 129 QEENKTWRRLYDP----NDPNTNRTITVEEI 155
E W++ + I+ E++
Sbjct: 111 HTE-LPWKQARLRAGVSEGDSCREKISTEDM 140
>gi|257438939|ref|ZP_05614694.1| putative prophage ps3 protein 01 [Faecalibacterium prausnitzii
A2-165]
gi|257198617|gb|EEU96901.1| putative prophage ps3 protein 01 [Faecalibacterium prausnitzii
A2-165]
Length = 340
Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 22 FIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYF 81
I + L +Q+ +Y + K + D +AW GPV+ VY+ F+ F
Sbjct: 179 VIAYIFSALHEVTPLTLQKLLYYIQGNYAAIYDKPLFDAPCEAWVHGPVYRNVYNLFRDF 238
Query: 82 DSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTW---RRL 138
+PI+ + + E E+++ + + + +S + L+ I +E W RR
Sbjct: 239 KYNPIDDDRFVPLKESALPLTPEAKEVVDRVLDTFGMYSGKVLESITHKE-APWLDARRG 297
Query: 139 YDPNDPNTNRTITVEEI----TKMADGSNISPEN 168
+ P D ++ I+++ + K+ + NI E+
Sbjct: 298 FLP-DETSHAEISLDAMKAYFKKVDEKYNIRTED 330
>gi|212716276|ref|ZP_03324404.1| hypothetical protein BIFCAT_01192 [Bifidobacterium catenulatum DSM
16992]
gi|212660788|gb|EEB21363.1| hypothetical protein BIFCAT_01192 [Bifidobacterium catenulatum DSM
16992]
Length = 168
Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 64/157 (40%), Gaps = 11/157 (7%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+I VAN FI + I I +L + + +Y + + K + +++ +AW GPV
Sbjct: 2 KSIQVANAFILR-HGSDIDITNLVLNKLVYFAQVESLRATGKPLFEDKIEAWPYGPVERN 60
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
VY F+ + + I + +++ +++ KY + L +N
Sbjct: 61 VYFTFQKYGRNRILKPEGET------AKDEQALSVVDGTAKKYGFLTAFDLVGFSHRKNS 114
Query: 134 TWRRLYDPNDPNTNRTITVEEITKMADGSNISPENVV 170
W+ +Y N IT + I DG P+N +
Sbjct: 115 AWKNVYR---EGENVEITNDAILASDDGLTF-PKNTL 147
>gi|326570377|gb|EGE20417.1| phage-associated protein [Moraxella catarrhalis BC8]
Length = 167
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 56/144 (38%), Gaps = 15/144 (10%)
Query: 8 QTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQ 67
PY+ I VAN+ + + +K P+ HLK+Q+ +Y +++E+ W+
Sbjct: 1 MIKAPYNPIDVANYIVAEAIKREKPVTHLKLQKLLYYVVAKYAKTYNTILINEDIVKWQY 60
Query: 68 GPVFVGVYHRFKYFDSHPIEVIM--------------DLSFRIFPKIANQEIGEIMESIW 113
GPV VYH FK I + D+ ++ + + + +
Sbjct: 61 GPVVKSVYHYFKLHGDRIITKPIAYLESAEIFNLKFTDVDVNNAQLGNDKRLVDTVGQVL 120
Query: 114 NKYQSHSTEQLQEIVQEENKTWRR 137
N + +L E +E WR
Sbjct: 121 NDTDLLTAYELVERTHKE-PAWRN 143
>gi|209554130|ref|YP_002284448.1| hypothetical protein UUR10_0035 [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
gi|209541631|gb|ACI59860.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
Length = 157
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKS-------MLDEEPQAWK 66
+ + VAN+F+ K + K+Q+ +Y + ++ + + DE+ +AW
Sbjct: 5 TPLIVANWFLTK-----ESMTLKKVQKLVYYAYSWYLILMNEKVDDLKNKLFDEKIKAWV 59
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQE 126
GP +Y+ FK + I I D + + + N + +I+ +W++Y +S QL+
Sbjct: 60 HGPAIPMLYNEFKEHKYNSIPKINDFNEQ---EYFNLDTIDILNQVWDEYGHYSANQLES 116
Query: 127 IVQEENKTWRRLYDPNDP--NTNRTITVEEI 155
I +E+ W + P + N I+ +EI
Sbjct: 117 ITHQED-PWIKARKGFGPLDSCNAVISDKEI 146
>gi|294671001|ref|ZP_06735857.1| hypothetical protein NEIELOOT_02708 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307488|gb|EFE48731.1| hypothetical protein NEIELOOT_02708 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 116
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 14 STIAVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+ VA + + ++ I +LK+Q+ Y + K + +E +AW GPV
Sbjct: 3 TAKDVAQYLLKLDEQHGGEGISNLKLQKLAYYSQGFFGAIYDKPLFNERVEAWTHGPVIP 62
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
+YH +K S+ I + K E E++ +++ + S +L+ + E
Sbjct: 63 DLYHEYKCHGSNLIPSSGIPNETSLSK----EEAELISEVYDVFGQFSAWKLRNMTHE 116
>gi|157311186|ref|YP_001469231.1| hypothetical protein P9_gp51 [Streptococcus phage P9]
gi|119104335|gb|ABL61080.1| hypothetical protein [Streptococcus phage P9]
Length = 173
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 15 TIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+ VAN+ I+ K PI++LK+Q+ +Y + +L+ + +E + WK GPV V
Sbjct: 3 ALFVANYIIEYSNKKGYPINNLKLQKLLYFVNVRNILENGAPLFEESMEKWKYGPVVPDV 62
Query: 75 YHRFKYFDSHPI---EVIMDLSFRIFPKIANQEIGE----------IMESIWNKYQSHST 121
YH +K F + I E+IM+ A+ EI E ++E+ +
Sbjct: 63 YHEYKRFGAFSISTDEMIMEYVEFSHSPFADLEITEYNPENVENTGLIENTVAALNNRDP 122
Query: 122 EQLQEIVQEENKTWRR 137
+L I + W++
Sbjct: 123 FELVNITHR-HTPWKK 137
>gi|27363593|ref|NP_759121.1| hypothetical protein VV1_0109 [Vibrio vulnificus CMCP6]
gi|27359709|gb|AAO08648.1| Uncharacterized phage-associated protein [Vibrio vulnificus CMCP6]
Length = 191
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 72/182 (39%), Gaps = 12/182 (6%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
S A + + + I + +LK+Q+ Y + Q ++ + DE+ +AW GPV
Sbjct: 3 SADIFAKALLQRASENGIQVSNLKLQKLAYYCQGYHLAQYEEPLFDEDLKAWDHGPVVRS 62
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
+Y ++ + I + + + + ++ + + QL+E E
Sbjct: 63 LYEEYQTYKKGTITASVGNAICEL----SDRAVQTIDFVLMTLGNMGAWQLREKSHRE-A 117
Query: 134 TW-RRLYDPNDPNTNRTITVEEITKMADGSNISPENVVEQIKKPVRFDSDSEFATLESQL 192
W + + +TIT +E+ + + EQ + + D A +ES++
Sbjct: 118 PWLAHVSKESKKVDYQTITHQELIDFFA------QELNEQHDRLLSIHMDRMEAAMESEV 171
Query: 193 VK 194
++
Sbjct: 172 IE 173
>gi|237750673|ref|ZP_04581153.1| prophage ps3 protein [Helicobacter bilis ATCC 43879]
gi|229373763|gb|EEO24154.1| prophage ps3 protein [Helicobacter bilis ATCC 43879]
Length = 175
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 66/179 (36%), Gaps = 32/179 (17%)
Query: 14 STIAVANFFIDKGVKYSIPI-----------------DHLKIQQFIYLTHCDVVLQKKKS 56
+ + VAN+F+ + I HLK+Q+ +Y + K
Sbjct: 3 NVVNVANYFLLLNKRRYEKISSEDDKDSRFQTEADMITHLKLQKLVYYAQGLYLAYFNKP 62
Query: 57 MLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKY 116
+ + +AW+ GPV +YH FK + + + + D + I++ + +Y
Sbjct: 63 LFTQSVEAWRHGPVVNDLYHIFKPYHKNDLMPLAD-KINENDLQLDDNEKFIIKMTFKRY 121
Query: 117 QSHSTEQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKMADGSNISPENVVEQIKK 175
S L++ EE W Y+ N N I E + VEQIK+
Sbjct: 122 GGLSANTLRDKTHEEPT-WLNTYELNK---NNVIDNELMKSF----------FVEQIKQ 166
>gi|67459185|ref|YP_246809.1| phage-associated protein [Rickettsia felis URRWXCal2]
gi|67004718|gb|AAY61644.1| Uncharacterized phage-associated protein [Rickettsia felis
URRWXCal2]
Length = 213
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 50/219 (22%), Positives = 93/219 (42%), Gaps = 21/219 (9%)
Query: 8 QTNPPYSTIAVANFFIDKGVKY-SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWK 66
Q S VAN+F+ + I LK+Q+ +Y + K + +EE +AW+
Sbjct: 5 QKEQALSCFDVANYFLVLVDREAGDIISQLKLQKLVYFAQGVHLALFNKPLFEEEIEAWQ 64
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQE 126
GPV + F I ++ F I+ ++ +M I++ Y HS L+
Sbjct: 65 HGPVAPKLRIPFSSLKDGSIAASGEMDFDIY----TEQQKNLMYKIFSLYGEHSARYLRN 120
Query: 127 IVQEENKTWRRLYDPNDPNTNRTITVEEITKMADGSNISPENVVEQIKKPVRFDSDSEFA 186
+ ++ WR + +++ TIT E+I + N+V IK + ++ +
Sbjct: 121 LTH-KHSIWREAIE----SSDNTITKEKIQEFFKA------NIVNDIKDYILLITEDDIQ 169
Query: 187 TLES---QLVKGFKSMPP--QLTKEFQEAQVQIKKDSAI 220
+E+ Q + S P +T E EA+ ++K+ I
Sbjct: 170 QMENAEDQWWMNYDSGVPAEDVTNEILEAKKELKEGKGI 208
>gi|239947434|ref|ZP_04699187.1| phage-associated protein [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921710|gb|EER21734.1| phage-associated protein [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 207
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 16/178 (8%)
Query: 14 STIAVANFFIDKGVKY-SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
S VAN+F+ + I LK+Q+ IY + K++ +EE +AWK GPV
Sbjct: 11 SCFDVANYFLVLVDREAGDSITQLKLQKLIYFAQGIHLALFDKALFEEEIKAWKHGPVVP 70
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+ F F + I + ++ F I+ ++ +++ +++ Y +HS L+ + +
Sbjct: 71 ALRSIFGNFRDNVIPLPYEIDFAIYTELQ----KKLIHKVYSFYGAHSAAYLRNLTHT-H 125
Query: 133 KTWRRLYDPNDPNTNRTITVEEITKMADGSNISPENVVEQIKKPVRFDSDSEFATLES 190
W + D TIT E+I + N++ IK + + + A +E+
Sbjct: 126 SIWYEAIEKAD----NTITKEKIQEFFKA------NIINNIKDYILSITKEDIAQIEN 173
>gi|33152650|ref|NP_874003.1| prophage ps3 protein01-like protein [Haemophilus ducreyi 35000HP]
gi|33148874|gb|AAP96392.1| possible prophage ps3 protein01-like protein [Haemophilus ducreyi
35000HP]
Length = 132
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 5/114 (4%)
Query: 20 NFFIDKGV--KYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR 77
N+F+ + + I +LKIQ+ +Y + K + E+ QAW GPV +Y++
Sbjct: 16 NYFLSQCNSEENGDLISNLKIQKLVYYAQGFSLAINNKPLFSEKIQAWTHGPVTPELYNK 75
Query: 78 FKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
+K + + + I + E +++ I + Y S +L+ + EE
Sbjct: 76 YKQYGN---GALPTTDLDIDFDKFSNEEKDLLNDINDVYGQFSAWKLRNMTHEE 126
>gi|59801484|ref|YP_208196.1| putative phage associated protein [Neisseria gonorrhoeae FA 1090]
gi|194099446|ref|YP_002002558.1| putative phage associated protein [Neisseria gonorrhoeae NCCP11945]
gi|239999683|ref|ZP_04719607.1| putative phage associated protein [Neisseria gonorrhoeae 35/02]
gi|240014427|ref|ZP_04721340.1| putative phage associated protein [Neisseria gonorrhoeae DGI18]
gi|240016861|ref|ZP_04723401.1| putative phage associated protein [Neisseria gonorrhoeae FA6140]
gi|240081450|ref|ZP_04725993.1| putative phage associated protein [Neisseria gonorrhoeae FA19]
gi|240113644|ref|ZP_04728134.1| putative phage associated protein [Neisseria gonorrhoeae MS11]
gi|240116382|ref|ZP_04730444.1| putative phage associated protein [Neisseria gonorrhoeae PID18]
gi|240117609|ref|ZP_04731671.1| putative phage associated protein [Neisseria gonorrhoeae PID1]
gi|240120854|ref|ZP_04733816.1| putative phage associated protein [Neisseria gonorrhoeae PID24-1]
gi|240123163|ref|ZP_04736119.1| putative phage associated protein [Neisseria gonorrhoeae PID332]
gi|240126046|ref|ZP_04738932.1| putative phage associated protein [Neisseria gonorrhoeae SK-92-679]
gi|240127869|ref|ZP_04740530.1| putative phage associated protein [Neisseria gonorrhoeae
SK-93-1035]
gi|260439788|ref|ZP_05793604.1| putative phage associated protein [Neisseria gonorrhoeae DGI2]
gi|268599707|ref|ZP_06133874.1| phage-associated protein [Neisseria gonorrhoeae MS11]
gi|268602049|ref|ZP_06136216.1| phage-associated protein [Neisseria gonorrhoeae PID18]
gi|268603315|ref|ZP_06137482.1| phage-associated protein [Neisseria gonorrhoeae PID1]
gi|268681791|ref|ZP_06148653.1| phage-associated protein [Neisseria gonorrhoeae PID332]
gi|268684637|ref|ZP_06151499.1| phage-associated protein [Neisseria gonorrhoeae SK-92-679]
gi|268686264|ref|ZP_06153126.1| phage-associated protein [Neisseria gonorrhoeae SK-93-1035]
gi|291043051|ref|ZP_06568781.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|293399347|ref|ZP_06643512.1| phage associated protein [Neisseria gonorrhoeae F62]
gi|59718379|gb|AAW89784.1| hypothetical protein, putative phage associated protein [Neisseria
gonorrhoeae FA 1090]
gi|193934736|gb|ACF30560.1| putative phage associated protein [Neisseria gonorrhoeae NCCP11945]
gi|268583838|gb|EEZ48514.1| phage-associated protein [Neisseria gonorrhoeae MS11]
gi|268586180|gb|EEZ50856.1| phage-associated protein [Neisseria gonorrhoeae PID18]
gi|268587446|gb|EEZ52122.1| phage-associated protein [Neisseria gonorrhoeae PID1]
gi|268622075|gb|EEZ54475.1| phage-associated protein [Neisseria gonorrhoeae PID332]
gi|268624921|gb|EEZ57321.1| phage-associated protein [Neisseria gonorrhoeae SK-92-679]
gi|268626548|gb|EEZ58948.1| phage-associated protein [Neisseria gonorrhoeae SK-93-1035]
gi|291013026|gb|EFE05002.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|291610761|gb|EFF39871.1| phage associated protein [Neisseria gonorrhoeae F62]
gi|317164954|gb|ADV08495.1| putative phage associated protein [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 179
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 14 STIAVANFFID-KGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+ VA+FF+ + I +LK+Q+ +Y + + + E + W+ GPV
Sbjct: 3 NAYDVADFFLSPFEEEDGEQISNLKLQKLLYYAQGYALAILNRPLFAENIEHWQHGPVVP 62
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+Y +K + P+ I P E ++ + + ++ L+ +E
Sbjct: 63 CIYRTYKKYGGSPLPA-----AHIEPDKYADEELVVLNRVRKEQGCYTAWALRNKTHQE- 116
Query: 133 KTWRRLYD 140
W +
Sbjct: 117 APWIQTRQ 124
>gi|331092230|ref|ZP_08341058.1| hypothetical protein HMPREF9477_01701 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330401662|gb|EGG81241.1| hypothetical protein HMPREF9477_01701 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 145
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
YS + +A + + K PI +L++Q+ +Y + + + DEE AW+ GPV
Sbjct: 3 YSALNIAKYVVTFCFKRGNPISNLQLQKILYYIQGYSLALRDEEAFDEEIVAWQYGPVIK 62
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
VY F + + PIE SFRI +I +QE +++ I + +L E E
Sbjct: 63 AVYDFFSIYAAMPIE----NSFRI--EIEDQEFEKMIRVIALDKMNIPVWKLVEQTHNE- 115
Query: 133 KTWRRLYDPNDPNTNRTITVEEITKM 158
W+ + + I E I +
Sbjct: 116 APWKYTTELFGMGS--VIPKEYIRRY 139
>gi|300772213|ref|ZP_07082083.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
gi|300760516|gb|EFK57342.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
Length = 169
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 11/150 (7%)
Query: 8 QTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQ 67
N + +A FF+ K + LK+Q+ +Y + V + + + +AW
Sbjct: 1 MVNFSLTANDIAPFFVKK------KVSPLKLQKLLYYSQVWYVKKFDLKLFSDPIKAWVF 54
Query: 68 GPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEI 127
GPV ++++FK I + F P I Q + + +E IWN Y S +L ++
Sbjct: 55 GPVVPVIWNKFKIVRRSDIIAPI-AHFYPCPTILPQNVLDHLEEIWNSYGHLSGSELVDL 113
Query: 128 VQEENKTW---RRLYDPNDPNTNRTITVEE 154
E W R+ P+ N I +
Sbjct: 114 THSE-YPWNASRKGLLDTQPSDNEIIINND 142
>gi|13357589|ref|NP_077863.1| hypothetical protein UU033 [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|170762084|ref|YP_001752113.1| hypothetical protein UPA3_0033 [Ureaplasma parvum serovar 3 str.
ATCC 27815]
gi|11345919|pir||F82941 hypothetical UU033 [imported] - Ureaplasma urealyticum
gi|6898980|gb|AAF30438.1|AE002103_3 hypothetical [Ureaplasma parvum serovar 3 str. ATCC 700970]
gi|168827661|gb|ACA32923.1| conserved hypothetical protein [Ureaplasma parvum serovar 3 str.
ATCC 27815]
Length = 157
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKS-------MLDEEPQAWK 66
+ + VAN+F+ K + K+Q+ +Y + + + + DE+ +AW
Sbjct: 5 TPLIVANWFLTK-----ESMTPKKVQKLVYYAYSWYLTLMNEKVDDLKNKLFDEKIKAWV 59
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQE 126
P +Y+ FK + I I D + + N + +I+ +W++Y +S QL+
Sbjct: 60 HEPAIPMLYNEFKEHKYNSIPKINDFNE---LEYFNLDTIDILNQVWDEYGHYSANQLES 116
Query: 127 IVQEENKTWRRLYDPNDP--NTNRTITVEEI 155
I +E+ W + P + N I+ +EI
Sbjct: 117 ITHQED-PWIKARKGFGPLDSCNAVISDKEI 146
>gi|172036018|ref|YP_001802519.1| hypothetical protein cce_1103 [Cyanothece sp. ATCC 51142]
gi|171697472|gb|ACB50453.1| unknown [Cyanothece sp. ATCC 51142]
Length = 196
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 63/147 (42%), Gaps = 9/147 (6%)
Query: 14 STIAVANFFIDKGVKYS--IPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
+ +A +FI + + + ++K+Q+ +Y + C + + + +E QAW+ GPV
Sbjct: 3 DPLEIAKYFIIRAYEDGREYQMTNMKVQKLLYYSQCLHLALYDEPLFSQEIQAWRYGPVC 62
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
Y + F++ + + + E E++E +W + + L ++ E
Sbjct: 63 PPAYRFYSEFEAKQLPIPQQDKL----ETLTPEKKELLEEVWLYFGEYHAYYLSDMTHLE 118
Query: 132 NKTWRRLYD--PNDPNTNRTITVEEIT 156
W++ + + TI ++++
Sbjct: 119 -FPWKKARKGLSSYERSTNTIDLKDMK 144
>gi|224541600|ref|ZP_03682139.1| hypothetical protein CATMIT_00771 [Catenibacterium mitsuokai DSM
15897]
gi|224525512|gb|EEF94617.1| hypothetical protein CATMIT_00771 [Catenibacterium mitsuokai DSM
15897]
Length = 332
Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 5/137 (3%)
Query: 22 FIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYF 81
I K + L +Q+ +YL M E QAW GPV+ VYH FK F
Sbjct: 170 VIAYLFKGLNEVTPLMLQKLLYLIQGTSYALYDHPMFIEHSQAWVHGPVYPDVYHLFKQF 229
Query: 82 DSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTW---RRL 138
+PI+ + F ++E +++ + + Y +S + L+ I ++ W R+
Sbjct: 230 SFNPIDDDRFVLFEELENTLSEEECHVIDLVIHTYGLYSAKVLETITHTQD-PWISARKG 288
Query: 139 YDPNDPNTNRTITVEEI 155
Y+ P ++ I E I
Sbjct: 289 YEGTIP-SHEPIIEENI 304
>gi|224436575|ref|ZP_03657584.1| prophage ps3 protein01-like protein [Helicobacter cinaedi CCUG
18818]
gi|313143077|ref|ZP_07805270.1| prophage protein [Helicobacter cinaedi CCUG 18818]
gi|313128108|gb|EFR45725.1| prophage protein [Helicobacter cinaedi CCUG 18818]
Length = 175
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 66/158 (41%), Gaps = 15/158 (9%)
Query: 14 STIAVANFFI---------DKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQA 64
I VA F+ D+ + I +LK+Q+ +Y +L K + +E+ +A
Sbjct: 2 KAIEVAKAFVFLFQQQLLNDEAQEEGDTITNLKVQKLLYYAQAYSLLYYNKPLFNEKIEA 61
Query: 65 WKQGPVFVGVYHRFKY-FDSHPIEVIMDL-SFRIFPKIANQEIGEIMESIWNKYQSHSTE 122
W GPV V++ K + + D+ N + +I+ ++WNKY ++
Sbjct: 62 WPHGPVVKEVFNEIKKEIGENGCRNLGDIWHLTKENFNLNDDDMDILLNVWNKYGKYTAS 121
Query: 123 QLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKMAD 160
+L+ + +E + +Y + N IT I D
Sbjct: 122 KLRNMTHDEQ-PYLNVYVESK---NNEITQTSIKAYFD 155
>gi|283769251|ref|ZP_06342155.1| toxin-antitoxin system, antitoxin component, Xre domain protein
[Bulleidia extructa W1219]
gi|283104227|gb|EFC05606.1| toxin-antitoxin system, antitoxin component, Xre domain protein
[Bulleidia extructa W1219]
Length = 151
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 53/145 (36%), Gaps = 11/145 (7%)
Query: 8 QTNPPYSTIAVANFFID-----KGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEP 62
Y VA +F++ + I +LK+Q+ +Y + + + +E
Sbjct: 1 MEKKGYKANYVAKWFLNYNRLIMSESDADLISNLKLQKLLYYAQGCFLACFDRPLFNEPI 60
Query: 63 QAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTE 122
AW+ GPV VY +K ++ I D + + ++N + +S
Sbjct: 61 VAWEHGPVVESVYQEYKVNRANGIVFDEDFINEFDDEEESLLEE-----VYNTFAKYSAW 115
Query: 123 QLQEIVQEENKTWRRLYDPNDPNTN 147
L+ + +E W + + N
Sbjct: 116 GLRNMTHQE-TPWINTQQSGEISQN 139
>gi|218281122|ref|ZP_03487657.1| hypothetical protein EUBIFOR_00218 [Eubacterium biforme DSM 3989]
gi|218217636|gb|EEC91174.1| hypothetical protein EUBIFOR_00218 [Eubacterium biforme DSM 3989]
Length = 333
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 22 FIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYF 81
I + + L +Q+ +Y + + M +E +AW GPV+ VY+ FK F
Sbjct: 169 VISYIFEKLDEVTPLMLQKLLYYIQGLSFVLNGREMFEENCEAWVHGPVYKDVYNIFKQF 228
Query: 82 DSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTW---RRL 138
+ I+ + F + K + E I++ + N + + + L++ +EN W R
Sbjct: 229 GFNVIDDPKFIMFEGYKKYLDDEDKYIIDLVVNTFGQYGGKTLEKTTHKEN-PWLIARNG 287
Query: 139 YDPNDPNTNRTITVEEI----TKMADGSNISPENVVEQ 172
Y + P +N IT + I K+ + +IS E + +
Sbjct: 288 YGDDIP-SNELITKDSIKNYFIKICNEYDISKEEDIHK 324
>gi|309805020|ref|ZP_07699077.1| conserved hypothetical protein [Lactobacillus iners LactinV 09V1-c]
gi|309806809|ref|ZP_07700798.1| conserved hypothetical protein [Lactobacillus iners LactinV 03V1-b]
gi|325912764|ref|ZP_08175143.1| hypothetical protein HMPREF0523_0447 [Lactobacillus iners UPII
60-B]
gi|308165679|gb|EFO67905.1| conserved hypothetical protein [Lactobacillus iners LactinV 09V1-c]
gi|308166783|gb|EFO68973.1| conserved hypothetical protein [Lactobacillus iners LactinV 03V1-b]
gi|325477895|gb|EGC81028.1| hypothetical protein HMPREF0523_0447 [Lactobacillus iners UPII
60-B]
Length = 154
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 65/153 (42%), Gaps = 20/153 (13%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKK-------KSMLDE-EPQA 64
Y+ VA +F+ KG K I K+Q+ +Y + + + ++ + +A
Sbjct: 3 YTFKDVAKWFLAKGNKD---ISPKKLQKLVYYAYAWTLTLLNDSSDDLENKLFEDGKFEA 59
Query: 65 WKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQL 124
W GPV +Y + + I + ++++ +++ +W Y +S +QL
Sbjct: 60 WIHGPVIRKLYVMYADYGFEDIPEKPEKPKF------SKDVEDVLNQVWEVYGDYSADQL 113
Query: 125 QEIVQEENKTWRRLYDPNDP--NTNRTITVEEI 155
+ I +E W++ P N + I+ ++I
Sbjct: 114 ESITHQEE-PWQKARKGFSPLQNCDNIISDKDI 145
>gi|225550956|ref|ZP_03771905.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 2
str. ATCC 27814]
gi|225380110|gb|EEH02472.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 2
str. ATCC 27814]
Length = 157
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKS-------MLDEEPQAWK 66
+ + VAN+F+ K + K+Q+ +Y + ++ + + DE+ +A
Sbjct: 5 TPLIVANWFLTK-----ESMTLKKVQKLVYYAYSWYLILMNEKVDDLKNKLFDEKIKARV 59
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQE 126
GP +Y+ FK + I I D + + + N + +I+ +W++Y +S QL+
Sbjct: 60 HGPAIPMLYNEFKEHKYNSIPKINDFNEQEY---FNLDTIDILNQVWDEYGHYSANQLES 116
Query: 127 IVQEENKTWRRLYDPNDP--NTNRTITVEEI 155
I +E+ W + P + N TI+ +EI
Sbjct: 117 ITHQED-PWIKARKGFGPLDSCNETISDKEI 146
>gi|258517004|ref|YP_003193226.1| prophage ps3 protein 01 [Desulfotomaculum acetoxidans DSM 771]
gi|257780709|gb|ACV64603.1| prophage ps3 protein 01 [Desulfotomaculum acetoxidans DSM 771]
Length = 163
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 74/160 (46%), Gaps = 10/160 (6%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+ I ++ I + HLK+Q+ IY + + +++++ +AW GPV
Sbjct: 6 NPIDLSRHVIKYVNDKGHEVSHLKLQKLIYYVDAWHNVYFNQPLIEDQFEAWMHGPVVRN 65
Query: 74 VYHRF--KYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
+++ F K PI+ + + F I I+++++ E++ + ++Y + L+ + E
Sbjct: 66 IWNYFRDKSVLYDPIK-LEEGYFDISEYISSEQL-ELINDVLDEYGDKTAYYLECLTHSE 123
Query: 132 NKTWRRL---YDPNDPNTNRTITVEEITKMADGSNISPEN 168
WRR Y P+D + +++ K GS + +N
Sbjct: 124 E-PWRRARLGYAPSDKC--EAVIYKDLIKQFYGSMLYGKN 160
>gi|306835838|ref|ZP_07468835.1| XRE family transcriptional regulator [Corynebacterium accolens ATCC
49726]
gi|304568312|gb|EFM43880.1| XRE family transcriptional regulator [Corynebacterium accolens ATCC
49726]
Length = 149
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 55/139 (39%), Gaps = 12/139 (8%)
Query: 13 YSTIAVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVV-LQKKKSMLDEEPQAWKQGPV 70
Y+ +A + + + + LKIQ+ +Y + + +E +AW GPV
Sbjct: 4 YTAHQIAEWLVAWAEETEEAELTPLKIQKLLYYAKGLYMRASGGVPLFNERMEAWAHGPV 63
Query: 71 FVGVYHRFKYFDSHPIE----VIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQE 126
V +Y K + PI+ + D ++ + + + + +WNKY +S L+
Sbjct: 64 VVDIYRELKKYGKSPIDPDTFISDDFNWDDYRPVEDT-----LIDVWNKYGPYSAWALRN 118
Query: 127 IVQEENKTWRRLYDPNDPN 145
E W++ +
Sbjct: 119 KTHTE-SPWKKNFVEEKRG 136
>gi|15838393|ref|NP_299081.1| hypothetical protein XF1793 [Xylella fastidiosa 9a5c]
gi|9106870|gb|AAF84601.1|AE004001_6 hypothetical protein XF_1793 [Xylella fastidiosa 9a5c]
Length = 102
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 46/90 (51%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
PYS +AN F+ K + + L++ + +YL H + ++ ++DE +AW+ GPV
Sbjct: 2 PYSPTIIANAFLQKAPQEGRALTPLQVLKLVYLAHGWCLGVHRQPLIDEPVEAWRAGPVI 61
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIA 101
+Y+ K + S I ++ + + + +
Sbjct: 62 RSLYNAIKQYGSSGITKLLPVRWFSWGLAS 91
>gi|42560746|ref|NP_975197.1| putative prophage protein (ps3) [Mycoplasma mycoides subsp.
mycoides SC str. PG1]
gi|42492242|emb|CAE76839.1| Putative prophage protein (ps3) [Mycoplasma mycoides subsp.
mycoides SC str. PG1]
Length = 191
Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 61/155 (39%), Gaps = 14/155 (9%)
Query: 5 TFTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKK-SMLDEEPQ 63
P YS ++++F+ K + K+Q+ Y + + D Q
Sbjct: 38 GGVNMRPKYSYKNISDWFLSK-----ESMTPKKLQKLTYYAEAWAYALFDEGILSDTSFQ 92
Query: 64 AWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQ 123
AW GPV ++ +K + + I + +++ ++ E+++++W+ Y + +
Sbjct: 93 AWIHGPVSPELWREYKDYGWNEIPKKENNDYKL-----DKNTLELLDAVWSTYGERTGYE 147
Query: 124 LQEIVQEENKTWRRLYDPND--PNTNRTITVEEIT 156
L+ I E W + + + I E++
Sbjct: 148 LEAISHSE-TPWINARKGLEELETSTKLIKPEDMK 181
>gi|288904688|ref|YP_003429909.1| phage-associated protein [Streptococcus gallolyticus UCN34]
gi|288731413|emb|CBI12965.1| putative phage-associated protein [Streptococcus gallolyticus
UCN34]
Length = 179
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 62/143 (43%), Gaps = 20/143 (13%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+ VAN+ I+ + + I++LK+Q+ +Y + +L+ + +E + WK GPV
Sbjct: 3 PALFVANYIIEYSNERNYEINNLKLQKLLYFINARCLLENDVPIFEESFEKWKFGPVVPQ 62
Query: 74 VYHRFKYFDSHPIEV----------------IMDLSFRIFPKIANQEI---GEIMESIWN 114
VYH +K F + I + +I + + E+++S +
Sbjct: 63 VYHEYKGFGAFNIPKSDIVREKHTIDFGRNPFENNKLKISTEYYDSNDIQHKELIQSTVD 122
Query: 115 KYQSHSTEQLQEIVQEENKTWRR 137
+ + +L E E+N W++
Sbjct: 123 SLKGFTPFELVENTHEQNI-WKK 144
>gi|224477005|ref|YP_002634611.1| putative phage-associated protein [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421612|emb|CAL28426.1| putative phage-associated protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 151
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 23/148 (15%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKK-------SMLDEEPQAWKQGPV 70
+ +F+ + + K+Q+ +Y V + + D++ +AW GPV
Sbjct: 8 IVEWFLSQ-----QSMSPKKLQKMLYYAQAWCVTLSNETSEEIENKLFDDKFEAWVHGPV 62
Query: 71 FVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
VY +K + + I I + ++I +++ + + Y + + QL+ I +
Sbjct: 63 IPEVYQTYKKYGYNNIPKIDE------NIQLEEDIEDVLIQVMDVYGNFNGNQLENITHQ 116
Query: 131 ENKTW---RRLYDPNDPNTNRTITVEEI 155
E K W R Y P + N N IT EE+
Sbjct: 117 E-KPWIDARIGYSPLE-NCNEIITEEEM 142
>gi|225870235|ref|YP_002746182.1| phage protein [Streptococcus equi subsp. equi 4047]
gi|225699639|emb|CAW93312.1| hypothetical phage protein [Streptococcus equi subsp. equi 4047]
Length = 180
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 66/142 (46%), Gaps = 21/142 (14%)
Query: 15 TIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+ VAN+ I+ +++ I++L+IQ+ +Y + +++ + ++ + WK GPV V
Sbjct: 4 ALFVANYIIEYCNDHNLEINNLRIQKLLYFINARNLVENGSPLFQDKIEKWKFGPVVPKV 63
Query: 75 YHRFKYFDSHPIEV------IMDLSFRIFP--------------KIANQEIGEIMESIWN 114
YH +K F + I I +F + P + + +++ES
Sbjct: 64 YHEYKRFGASTITKDDISAQIWKFNFEVSPFGEESPIEVLTYNKEEFSDSQIQLIESTIL 123
Query: 115 KYQSHSTEQLQEIVQEENKTWR 136
+ +ST +L ++ E++ W+
Sbjct: 124 ALKKYSTFKLVDLTHEDDM-WK 144
>gi|301320700|gb|ADK69343.1| conserved hypothetical protein [Mycoplasma mycoides subsp. mycoides
SC str. Gladysdale]
Length = 150
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 60/149 (40%), Gaps = 14/149 (9%)
Query: 11 PPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKK-SMLDEEPQAWKQGP 69
P YS ++++F+ K + K+Q+ Y + + D QAW GP
Sbjct: 3 PKYSYKDISDWFLSK-----ESMTPKKLQKLTYYAEAWAYALFDEGILSDTSFQAWIHGP 57
Query: 70 VFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
V ++ +K + + I + +++ ++ E+++++W+ Y + +L+ I
Sbjct: 58 VSPELWRDYKDYGWNEIPKKENNDYKL-----DKNTLELLDAVWSTYGERTGYELEAISH 112
Query: 130 EENKTWRRLYDPND--PNTNRTITVEEIT 156
E W + + I E++
Sbjct: 113 SE-TPWINARKGLGELEASTKLIKPEDMK 140
>gi|313665379|ref|YP_004047250.1| hypothetical protein MSB_A0506 [Mycoplasma leachii PG50]
gi|312949417|gb|ADR24013.1| conserved hypothetical protein [Mycoplasma leachii PG50]
Length = 150
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 61/149 (40%), Gaps = 14/149 (9%)
Query: 11 PPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKK-SMLDEEPQAWKQGP 69
P YS ++++F+ K + K+Q+ Y + + D QAW GP
Sbjct: 3 PKYSYKDISDWFLSK-----ESMTPKKLQKLTYYAEAWAYALFDEGILSDTSFQAWIHGP 57
Query: 70 VFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
V ++ +K + + I + +++ ++ E+++++W+ Y + +L+ I
Sbjct: 58 VSPELWRDYKVYGWNEIPKKENNDYKL-----DKNTLELLDAVWSTYGERTGYELEAISH 112
Query: 130 EENKTWRRLYDPND--PNTNRTITVEEIT 156
E W + + + I E++
Sbjct: 113 SE-TPWINARKGLEELEASTKLIKPEDMK 140
>gi|301320789|gb|ADK69432.1| conserved hypothetical protein [Mycoplasma mycoides subsp. mycoides
SC str. Gladysdale]
Length = 150
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 61/149 (40%), Gaps = 14/149 (9%)
Query: 11 PPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKK-SMLDEEPQAWKQGP 69
P YS ++++F+ K + K+Q+ Y + + D QAW GP
Sbjct: 3 PKYSYKNISDWFLSK-----ESMTPKKLQKLTYYAEAWAYALFDEGILSDTSFQAWIHGP 57
Query: 70 VFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
V ++ +K + + I + +++ ++ E+++++W+ Y + +L+ I
Sbjct: 58 VSPELWREYKDYGWNEIPKKENNDYKL-----DKNTLELLDAVWSTYGERTGYELEAISH 112
Query: 130 EENKTWRRLYDPND--PNTNRTITVEEIT 156
E W + + + I E++
Sbjct: 113 SE-TPWINARKGLEELETSTKLIKPEDMK 140
>gi|268595496|ref|ZP_06129663.1| phage-associated protein [Neisseria gonorrhoeae 35/02]
gi|268597550|ref|ZP_06131717.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268548885|gb|EEZ44303.1| phage-associated protein [Neisseria gonorrhoeae 35/02]
gi|268551338|gb|EEZ46357.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
Length = 173
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 47/123 (38%), Gaps = 7/123 (5%)
Query: 19 ANFFID-KGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR 77
A+FF+ + I +LK+Q+ +Y + + + E + W+ GPV +Y
Sbjct: 2 ADFFLSPFEEEDGEQISNLKLQKLLYYAQGYALAILNRPLFAENIEHWQHGPVVPCIYRT 61
Query: 78 FKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRR 137
+K + P+ I P E ++ + + ++ L+ +E W +
Sbjct: 62 YKKYGGSPLPA-----AHIEPDKYADEELVVLNRVRKEQGCYTAWALRNKTHQE-APWIQ 115
Query: 138 LYD 140
Sbjct: 116 TRQ 118
>gi|210622827|ref|ZP_03293371.1| hypothetical protein CLOHIR_01319 [Clostridium hiranonis DSM 13275]
gi|210154044|gb|EEA85050.1| hypothetical protein CLOHIR_01319 [Clostridium hiranonis DSM 13275]
Length = 327
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 11/139 (7%)
Query: 19 ANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRF 78
+ + I K + L +Q+ +Y + +E+ +AW GPV+ VY RF
Sbjct: 167 SKYIIKKCG----DVTPLSLQKMLYYVQGFYYAFFNSFLFEEDCEAWIHGPVYKDVYDRF 222
Query: 79 KYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRL 138
K + + IE +L +F + I++S+ + +S + L+E E K W
Sbjct: 223 KDYRYNQIESEENLDELLFTSLE----ISILDSVIKNFGCYSGKILEEFTHTE-KPWLVA 277
Query: 139 YD--PNDPNTNRTITVEEI 155
P + + I+ E I
Sbjct: 278 RGNIPQNKKSQNIISKESI 296
>gi|125974149|ref|YP_001038059.1| phage-associated protein-like protein [Clostridium thermocellum
ATCC 27405]
gi|125714374|gb|ABN52866.1| Uncharacterized phage-associated protein-like protein [Clostridium
thermocellum ATCC 27405]
Length = 332
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 7/138 (5%)
Query: 20 NFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFK 79
+ I + I L +Q+ +Y + + + +E+ +AW GPV+ VY+R+
Sbjct: 169 DSIIQYLLYKCEDITPLALQKALYYVQGFYYAFEGRFLFEEDCEAWVHGPVYRDVYNRYS 228
Query: 80 YFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLY 139
+ PIE + +F I++S+ + +S + L++ E K WR
Sbjct: 229 SYRFDPIESVEAFDESVFTTAE----KAILDSVIKNFCCYSGKILEKFTHLE-KPWRYTR 283
Query: 140 D--PNDPNTNRTITVEEI 155
D P D ++NR I E I
Sbjct: 284 DGLPVDAHSNRVIPKELI 301
>gi|325996551|gb|ADZ51956.1| Uncharacterized phage-associated protein [Helicobacter pylori 2018]
gi|325998140|gb|ADZ50348.1| putative phage-associated protein [Helicobacter pylori 2017]
Length = 148
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 58/143 (40%), Gaps = 12/143 (8%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+ A I+ + PI +LK+Q+ +Y+ + ++ E+ QAW GPV
Sbjct: 2 KALDAAKILINLSLDNQKPITNLKLQKMLYIAQ----AESDSKLIKEDFQAWDYGPVIPD 57
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
VY F S PI ++ P ++E + + I+N+Y+ + ++
Sbjct: 58 VYRNFCINGSTPITKREEI-----PNNIDREKEKELAKIYNQYKDADAWNMVRATHQKES 112
Query: 134 TWRRLYDPNDPNTNRTITVEEIT 156
W + + + I ++I
Sbjct: 113 AWSK---HHVKGMRKVIKRDDIK 132
>gi|331003171|ref|ZP_08326679.1| hypothetical protein HMPREF0491_01541 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330412927|gb|EGG92306.1| hypothetical protein HMPREF0491_01541 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 335
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 62/148 (41%), Gaps = 11/148 (7%)
Query: 22 FIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYF 81
I + I L +Q+ +Y + + +E+ +AW GPV+ VY F+ F
Sbjct: 170 VIAYIFEKLEEITPLMLQKLLYFIQGVYSALYGRPIFEEDCRAWVHGPVYPEVYELFRDF 229
Query: 82 DSHPIEVIMDLSFRIFPKIAN---QEIGEIMESIWNKYQSHSTEQLQEIVQEENKTW--- 135
+PIE D F + + ++E + N + + + L++I E W
Sbjct: 230 KYNPIE---DARFALLNGTKDALTDNEKRVIELVVNTFGMYGGKVLEKITHNEE-PWIEA 285
Query: 136 RRLYDPNDPNTNRTITVEEITKMADGSN 163
R+ Y + P +N ++ E I + +N
Sbjct: 286 RKGYGDSIP-SNEILSKERIMQYYTITN 312
>gi|295112182|emb|CBL28932.1| Uncharacterized phage-associated protein [Synergistetes bacterium
SGP1]
Length = 139
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 59/145 (40%), Gaps = 9/145 (6%)
Query: 15 TIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+ +A + + K VK S I +L++Q+ +Y D + + + + +AW GPV V
Sbjct: 3 ALDLAKYIVTKCVKDSCAISNLQLQKILYFIQKDFLCR-GEFAFLDAIEAWPFGPVVPAV 61
Query: 75 YHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKT 134
Y+ F F S I + + ++ I + L E +N
Sbjct: 62 YYHFCIFGSMSITTAYEG------ITIEAKDRARIDPIVEAKRVLPPWDLVEDTHRKNGA 115
Query: 135 WRRLYDPNDPNTNRTITVEEITKMA 159
W ++Y D NR + ++ K+A
Sbjct: 116 WDQIY--QDGAGNRKVIPPDLIKVA 138
>gi|148284657|ref|YP_001248747.1| hypothetical protein OTBS_1191 [Orientia tsutsugamushi str.
Boryong]
gi|146740096|emb|CAM80257.1| hypothetical protein OTBS_1191 [Orientia tsutsugamushi str.
Boryong]
Length = 129
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Query: 5 TFTQTNPPYSTIAVANFFIDKGVKY-SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQ 63
T Q S VA++F+ + I LK+Q+ +Y + + K + E+ +
Sbjct: 2 TVQQKGELLSCFDVASYFLVLVDREAGDVITQLKLQKLVYFSQGVHLALFDKPLFKEDIE 61
Query: 64 AWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQ 123
AW+ GPV + F F+++ I ++ F I+ + E++ I++ Y H+
Sbjct: 62 AWQNGPVVRHLRSIFGSFEANAIPGPGEIDFSIY----TNQQKELIYKIYSSYGEHTASY 117
Query: 124 LQEIVQ 129
L+++
Sbjct: 118 LRDLTH 123
>gi|146298683|ref|YP_001193274.1| phage-associated protein [Flavobacterium johnsoniae UW101]
gi|146153101|gb|ABQ03955.1| Uncharacterized phage-associated protein [Flavobacterium johnsoniae
UW101]
Length = 156
Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 8/134 (5%)
Query: 19 ANFFI-DKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR 77
++ I + S ++HLK+Q+ +Y + D + QAW GPV +Y R
Sbjct: 8 CDYIIFRLKSEESGSLNHLKLQKLLYYVQSWHLAFYGTRFFDGKFQAWIHGPVNRAIYDR 67
Query: 78 FK--YFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTW 135
FK + I+ + DLS E+ E ++ + Y S L+ +E W
Sbjct: 68 FKDTKYMYSTID-LDDLSDTEITTKLPLEVKEHIDVVLETYAGFSDTDLESKTHQEE-PW 125
Query: 136 ---RRLYDPNDPNT 146
R+ + P++
Sbjct: 126 INARKGFKPSERCE 139
>gi|213692364|ref|YP_002322950.1| hypothetical protein Blon_1491 [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|213523825|gb|ACJ52572.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|320458503|dbj|BAJ69124.1| hypothetical phage protein [Bifidobacterium longum subsp. infantis
ATCC 15697]
Length = 145
Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 52/141 (36%), Gaps = 12/141 (8%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
S VA + +DK + +K+++ Y + ++ ++ + E +AW GPV
Sbjct: 3 SIFDVAAYVLDKLGV----MTTMKLEKLCYYSQAWSLVWDERRLFPERFEAWANGPVCPD 58
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
+YH K I P +++ ++++ Y QL E+ E
Sbjct: 59 LYHAHK--GMFKITR---GDIHGDPSNIDEDGINTIDAVLKAYGKMGAYQLSELTHSER- 112
Query: 134 TWRRLYD--PNDPNTNRTITV 152
W+ P N IT
Sbjct: 113 PWKDARGNLPQGAICNTEITE 133
>gi|313678592|ref|YP_004056332.1| hypothetical protein MBOVPG45_0501 [Mycoplasma bovis PG45]
gi|312950116|gb|ADR24711.1| conserved hypothetical protein [Mycoplasma bovis PG45]
Length = 150
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 61/152 (40%), Gaps = 14/152 (9%)
Query: 10 NPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKK-SMLDEEPQAWKQG 68
N YS V+N+F+ K + K+Q+ Y + + D QAW G
Sbjct: 2 NKKYSYKDVSNWFLSK-----ESMTPKKLQKLTYYAEAWANALLGEGILSDTAFQAWVHG 56
Query: 69 PVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIV 128
PV ++H +K + + IE + + ++ I E+++++W Y S +L+ I
Sbjct: 57 PVSPELWHDYKEYGWNEIEQLKPNDEKF-----SKNILELLDAVWITYGDKSGYELEAIS 111
Query: 129 QEENKTWRRLYD--PNDPNTNRTITVEEITKM 158
E W + + + + I ++
Sbjct: 112 HSEE-PWLKARNGLSEFEISTKVIDPADMKNF 142
>gi|317473126|ref|ZP_07932424.1| hypothetical protein HMPREF1011_02774 [Anaerostipes sp. 3_2_56FAA]
gi|316899350|gb|EFV21366.1| hypothetical protein HMPREF1011_02774 [Anaerostipes sp. 3_2_56FAA]
Length = 150
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 56/149 (37%), Gaps = 9/149 (6%)
Query: 15 TIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
VA + + K P+ +K+++ Y + + DEE +AW GPV +
Sbjct: 7 VFDVAKYILHK----KGPMTTMKLEKLTYYCQAWSLAWDDVPLFDEEFEAWANGPVCPQL 62
Query: 75 YHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKT 134
+ K+ ++ + + +++ E M+++ Y + L E+ +E
Sbjct: 63 FE--KHRGLFVVDEDIFTDSGSIQNVFSEDELETMDNVLEYYGDKEPQWLSELTHKE-AP 119
Query: 135 WRRLYDPNDPN--TNRTITVEEITKMADG 161
W+ P N IT E + G
Sbjct: 120 WKIARAGCAPGAYCNEVITKESMQSYYGG 148
>gi|159904495|ref|YP_001548157.1| putative prophage protein (ps3) [Methanococcus maripaludis C6]
gi|159885988|gb|ABX00925.1| putative prophage protein (ps3) [Methanococcus maripaludis C6]
Length = 161
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 58/146 (39%), Gaps = 15/146 (10%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSML-DEEPQAWKQGPVF 71
Y+ +AN+F+ K + H K+Q+ Y K ++ ++ +AW GPV
Sbjct: 14 YTIFELANWFLSKS-----SMTHKKLQKLCYYAVAWHYALYDKQLISNDTFEAWVHGPVS 68
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
+Y +++ + +PI + + + + +E ++ Y+ QL+ EE
Sbjct: 69 RELYEKYRGYAWNPIGQRSE------APNFDADDNQYLEILYETYKHLDGHQLEARTHEE 122
Query: 132 NKTWRRLYDPNDPN--TNRTITVEEI 155
W+ +N I E +
Sbjct: 123 -LPWKEARKGLGELDPSNNIINPETM 147
>gi|189183139|ref|YP_001936924.1| hypothetical protein OTT_0232 [Orientia tsutsugamushi str. Ikeda]
gi|189179910|dbj|BAG39690.1| hypothetical protein OTT_0232 [Orientia tsutsugamushi str. Ikeda]
Length = 148
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 14/157 (8%)
Query: 5 TFTQTNPPYSTIAVANFFIDKGVKY-SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQ 63
T Q S VA++F+ + I LK+Q +Y + K + E+ +
Sbjct: 2 TIQQKGELLSCFDVASYFLVLVDREAGDIITQLKLQNLVYFAQGVHLALFDKPLFKEDIE 61
Query: 64 AWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQ 123
AW+ GPV + F F+++ I ++ F I+ + E++ I++ Y H+
Sbjct: 62 AWENGPVVRHLRSIFGGFEANAIPAPGEIDFSIYTRQQ----KEVIYKIYSSYGEHTASY 117
Query: 124 LQEIV--QEENKTWRRLYDPNDPNTNRTITVEEITKM 158
L+++ W+ +R IT EE+ K
Sbjct: 118 LRDLTYLH---SIWQEAIIRP----SRVITKEEMRKF 147
>gi|300869079|ref|ZP_07113680.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300332936|emb|CBN58876.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 159
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 65/141 (46%), Gaps = 10/141 (7%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR 77
+A+++I + + K+Q+ +Y + + + DE+ QAW GP +++
Sbjct: 13 LADYYIWFANDVGSYLSNQKLQKLLYYAQAWYLAFEDTPLFDEDFQAWVHGPTIPALFYE 72
Query: 78 FK-YFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWR 136
+K F PI + ++ FP +E+ + ++ + ++Y +L+ +V+ E+ W
Sbjct: 73 YKEQFGFKPI--LKEVEKPEFP----EEVQKFLDDLSDEYFFLDAYELELMVRRED-PWI 125
Query: 137 RLYD--PNDPNTNRTITVEEI 155
+ P D + IT E +
Sbjct: 126 KARGDLPRDQPCHAIITKELM 146
>gi|189183561|ref|YP_001937346.1| hypothetical protein OTT_0654 [Orientia tsutsugamushi str. Ikeda]
gi|189180332|dbj|BAG40112.1| hypothetical protein OTT_0654 [Orientia tsutsugamushi str. Ikeda]
Length = 197
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 67/155 (43%), Gaps = 10/155 (6%)
Query: 5 TFTQTNPPYSTIAVANFFIDKGVKY-SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQ 63
T Q S VA++F+ + I LK+Q+ +Y + K + E+ +
Sbjct: 2 TIQQKGELLSCFDVASYFLVLVDREAGDVITQLKLQKLVYFAQGVHLALFDKHLFKEDIE 61
Query: 64 AWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQ 123
AW+ GPV + F F+++ I + F I+ + E++ I++ Y H+
Sbjct: 62 AWENGPVVRHLRSIFGGFEANAIPAPGQIDFSIY----TNQQKELIYKIYSSYGEHTASY 117
Query: 124 LQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKM 158
L+++ + + + P +R IT EE+ K
Sbjct: 118 LRDLTHLHSILQQAIIRP-----SRVITKEEMRKF 147
>gi|301300644|ref|ZP_07206833.1| hypothetical protein HMPREF9269_0365 [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300851752|gb|EFK79447.1| hypothetical protein HMPREF9269_0365 [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 168
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 7/129 (5%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
S +AVANF I K P+ +LK+Q+ ++ + + +++ W+ GPV
Sbjct: 9 SPMAVANFIIGVAKKEDKPVTNLKLQKVLFFLQGYCLSEYDTPLINGNFSKWRYGPVEEE 68
Query: 74 VYHRFKYFDSHPIE------VIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEI 127
VY FKY+ PIE + F E +I++ + +K T +L +
Sbjct: 69 VYGDFKYYGPAPIENKSIYFNKEKIEFYSEEVNLPNEFKKILQEVISKMLDVETWELVNL 128
Query: 128 VQEENKTWR 136
+ W+
Sbjct: 129 THYHSS-WK 136
>gi|300864696|ref|ZP_07109552.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300337302|emb|CBN54700.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 210
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 7 TQTNP-PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAW 65
TQTN + + +AN+FI K I+ K+Q+ +Y + + + DE+ QAW
Sbjct: 51 TQTNSEKLTCVDIANYFIWLASKTDREINVYKLQKLVYYAQAWHLGVYETLLFDEDFQAW 110
Query: 66 KQGPVFVGVYHRFKY-FDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQL 124
GPV + +++Y F+ PI +I +++I E +E + Y + E L
Sbjct: 111 IHGPVIPDLLEKYQYQFNWEPI------VEKIEKPKLSEQIEEFIEEVAEAYFEYDDETL 164
Query: 125 QEIVQEENKTWRRLYD--PNDPNTNRTITVEEITKM 158
+ ++ E K W P + + + I+ E + K
Sbjct: 165 ERMICSE-KPWLEARGDLPREESCHAIISQESMKKY 199
>gi|224543434|ref|ZP_03683973.1| hypothetical protein CATMIT_02643 [Catenibacterium mitsuokai DSM
15897]
gi|224523561|gb|EEF92666.1| hypothetical protein CATMIT_02643 [Catenibacterium mitsuokai DSM
15897]
Length = 204
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 12/150 (8%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDE-EPQAWKQGPVFV 72
VA++F+ KG + + KIQ+ Y + + + D E +AW GPV
Sbjct: 55 DITDVADWFLLKGN-----MSNKKIQKLCYYAEAWSLTLLDQDIADHSEFEAWVHGPVNP 109
Query: 73 GVYHRFKYFDSHP--IEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
+Y FK + H I ++ R+ E E++E++W+ Y + +QL+ +
Sbjct: 110 TLYQTFKGYGWHELKITNREEVMARMENLFT-PEQVEVLEAVWDTYGEYGADQLEALTHT 168
Query: 131 ENKTW--RRLYDPNDPNTNRTITVEEITKM 158
E W +R+ + + I+ + +
Sbjct: 169 ER-PWLEQRVGLGKFESCHSVISSTTMKEY 197
>gi|293557209|ref|ZP_06675758.1| hypothetical protein EfmE1039_2500 [Enterococcus faecium E1039]
gi|291600632|gb|EFF30935.1| hypothetical protein EfmE1039_2500 [Enterococcus faecium E1039]
Length = 158
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 18/137 (13%)
Query: 21 FFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKK-------SMLDEEPQAWKQGPVFVG 73
+F+ K + K+Q+ +Y + ++ + + D + QAW GPV
Sbjct: 13 WFLSK-----QSMSPKKLQKMLYYAYSWGLVLLNEDPENLDNKLFDAQFQAWVHGPVIPE 67
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
+Y +K + I + E+ +++ ++ Y S QL+ + E
Sbjct: 68 IYSEYKTYGFRDIPKKEFGFGEDLAL--DSEVEDVLNQVFEVYSEFSGNQLENLTHSEE- 124
Query: 134 TWRRLYD---PNDPNTN 147
W+ P DP+TN
Sbjct: 125 PWQEARKDCLPMDPSTN 141
>gi|237709229|ref|ZP_04539710.1| phage-associated protein [Bacteroides sp. 9_1_42FAA]
gi|237726530|ref|ZP_04557011.1| phage-associated protein [Bacteroides sp. D4]
gi|256840936|ref|ZP_05546444.1| phage-associated protein [Parabacteroides sp. D13]
gi|270295253|ref|ZP_06201454.1| phage-associated protein [Bacteroides sp. D20]
gi|282877647|ref|ZP_06286462.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
gi|294776637|ref|ZP_06742106.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|299148741|ref|ZP_07041803.1| toxin-antitoxin system, antitoxin component, Xre family
[Bacteroides sp. 3_1_23]
gi|301309629|ref|ZP_07215570.1| toxin-antitoxin system, antitoxin component, Xre family
[Bacteroides sp. 20_3]
gi|317475394|ref|ZP_07934658.1| hypothetical protein HMPREF1016_01640 [Bacteroides eggerthii
1_2_48FAA]
gi|325299634|ref|YP_004259551.1| phage-associated protein [Bacteroides salanitronis DSM 18170]
gi|229435056|gb|EEO45133.1| phage-associated protein [Bacteroides dorei 5_1_36/D4]
gi|229456925|gb|EEO62646.1| phage-associated protein [Bacteroides sp. 9_1_42FAA]
gi|256738208|gb|EEU51534.1| phage-associated protein [Parabacteroides sp. D13]
gi|270274500|gb|EFA20361.1| phage-associated protein [Bacteroides sp. D20]
gi|281300219|gb|EFA92573.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
gi|294449552|gb|EFG18083.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|298513502|gb|EFI37389.1| toxin-antitoxin system, antitoxin component, Xre family
[Bacteroides sp. 3_1_23]
gi|300832373|gb|EFK63002.1| toxin-antitoxin system, antitoxin component, Xre family
[Bacteroides sp. 20_3]
gi|316908422|gb|EFV30112.1| hypothetical protein HMPREF1016_01640 [Bacteroides eggerthii
1_2_48FAA]
gi|324319187|gb|ADY37078.1| phage-associated protein [Bacteroides salanitronis DSM 18170]
Length = 159
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 60/150 (40%), Gaps = 14/150 (9%)
Query: 17 AVANFFIDKGVKYSI--PIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+ ++ I + + +LK+Q+ +Y KK M D E +AW GPV +
Sbjct: 6 DITDYIILRVKSEDRFASLINLKLQKLLYYVQAWSYGINKKPMFDGEFEAWIHGPVNREI 65
Query: 75 YHRFKY----FDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
Y+RF + I+ M+ + + + E E ++ I Y +S +L+ +
Sbjct: 66 YNRFNSTKYLYSEINIDDCMNHNVSL-----SSEDAEFIDFILENYLKYSGAELERLSHN 120
Query: 131 ENKTWRRLYDP--NDPNTNRTITVEEITKM 158
E W + ++ IT E + +
Sbjct: 121 E-MPWIETRGDLNVNERCDKVITPELMIEY 149
>gi|159904805|ref|YP_001548467.1| putative prophage protein (ps3) [Methanococcus maripaludis C6]
gi|159886298|gb|ABX01235.1| putative prophage protein (ps3) [Methanococcus maripaludis C6]
Length = 153
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 15/146 (10%)
Query: 16 IAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDE-EPQAWKQGPVFVGV 74
VA +F++K + H K+Q+ Y K ++ E +AW GPV +
Sbjct: 10 FDVAKWFLNK-----ESMSHKKLQKLCYYALSWYSAVYDKELIPTVEFEAWVHGPVIREL 64
Query: 75 YHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKT 134
Y +K + I + ++E+ ++SI+ Y S ++L+ + +E
Sbjct: 65 YENYKSYKFFDIPKETEKPDF------SKELNNFLDSIYETYGEMSGDELESLTHQEE-P 117
Query: 135 W--RRLYDPNDPNTNRTITVEEITKM 158
W R+ + ++ I E I K
Sbjct: 118 WINARMGLKDYESSKNIINNEIIKKF 143
>gi|326955259|gb|AEA28954.1| hypothetical protein Psed_6886 [Pseudonocardia dioxanivorans
CB1190]
Length = 153
Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 52/132 (39%), Gaps = 12/132 (9%)
Query: 17 AVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYH 76
VA + + K P+ +K+Q+ +Y ++ ++ M E QAW GPV +Y
Sbjct: 6 DVAAYILSK----HGPMTAMKLQKLVYYCQAWHLVWAEQPMFSSEIQAWANGPVVYDLYK 61
Query: 77 RFK-YFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTW 135
+ F +P E+ D P + +++I + Y S L E+ E+ W
Sbjct: 62 LHRGRFTLNPGEIPGD------PDALDGHEKYTVDAIIDAYGDKSAHWLSELTHAED-PW 114
Query: 136 RRLYDPNDPNTN 147
R +
Sbjct: 115 RNARERAGLGER 126
>gi|306817761|ref|ZP_07451502.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
gi|304649410|gb|EFM46694.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
Length = 208
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 56/134 (41%), Gaps = 5/134 (3%)
Query: 14 STIAVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
AVA + + + P + LK+ + +YL + + + ++D + +A++ GPV
Sbjct: 28 DPQAVAEYILMLDSRREDPDVTQLKLHKLLYLAQANYLASTGRRLMDSDVEAFRHGPVID 87
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+ +K +D I S + + + IW YQ +S L+ + ++
Sbjct: 88 AIRSTYKPYDRDIIVNRHKPSKKTTLPPDAAD---FLNRIWEMYQDNSASYLRNLTHRQD 144
Query: 133 KTWRRLYDPNDPNT 146
WR Y + +T
Sbjct: 145 -PWRDNYVEGESHT 157
>gi|256384054|gb|ACU78624.1| CdsE [Mycoplasma mycoides subsp. capri str. GM12]
gi|256384886|gb|ACU79455.1| CdsE [Mycoplasma mycoides subsp. capri str. GM12]
gi|296455308|gb|ADH21543.1| cdse [synthetic Mycoplasma mycoides JCVI-syn1.0]
Length = 151
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 65/148 (43%), Gaps = 13/148 (8%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEE-PQAWKQGPV 70
YS ++++F+ K + H K+Q+ Y K +L++ QAW GPV
Sbjct: 4 KYSYKDISDWFLAK-----ESMTHKKLQKLTYYAEAWSWALLKHGILNDTAFQAWIHGPV 58
Query: 71 FVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
++ +K + + I + +F +++ ++++++W Y S +L+ +
Sbjct: 59 SPELWEVYKNYGWNDIPKKDLRNDYLF----DEKTLDVLDAVWTTYGQKSGYELECLSHS 114
Query: 131 ENKTWRRLYDP--NDPNTNRTITVEEIT 156
E+ W++ + +N I E++
Sbjct: 115 ED-PWKKARNGLLEFQPSNNVINSEDMK 141
>gi|37523466|ref|NP_926843.1| hypothetical protein glr3897 [Gloeobacter violaceus PCC 7421]
gi|35214470|dbj|BAC91838.1| glr3897 [Gloeobacter violaceus PCC 7421]
Length = 142
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 57/140 (40%), Gaps = 13/140 (9%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+ A + ++K I +K+Q+ +Y + ++ + DE +AW GPV
Sbjct: 3 TADDAAAYILNKLGA----ITAMKLQKLLYYSQAWSLVWDDHPLFDERIEAWANGPVIPA 58
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
+Y + + + ++ P + E ++++ Y S++ L ++ +E
Sbjct: 59 IYEQHRG------QYLVTEWLAGNPGNLGSDAIETIDAVLKVYGDKSSQWLSDLTHKE-A 111
Query: 134 TWR--RLYDPNDPNTNRTIT 151
WR RL P + IT
Sbjct: 112 PWRDARLGIPTGVPCKQEIT 131
>gi|331703477|ref|YP_004400164.1| hypothetical protein MLC_4580 [Mycoplasma mycoides subsp. capri LC
str. 95010]
gi|328802032|emb|CBW54186.1| Conserved hypothetical protein [Mycoplasma mycoides subsp. capri LC
str. 95010]
Length = 153
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 65/148 (43%), Gaps = 13/148 (8%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEE-PQAWKQGPV 70
YS ++++F+ K + H K+Q+ Y K +L++ QAW GPV
Sbjct: 6 KYSYKDISDWFLAK-----ESMTHKKLQKLTYYAEAWSWALLKHGILNDTAFQAWIHGPV 60
Query: 71 FVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
++ +K + + I + +F +++ ++++++W Y S +L+ +
Sbjct: 61 SPELWEVYKNYGWNDIPKKDLRNDYLF----DEKTLDVLDAVWTTYGQKSGYELECLSHS 116
Query: 131 ENKTWRRLYDP--NDPNTNRTITVEEIT 156
E+ W++ + +N I E++
Sbjct: 117 ED-PWKKARNGLLEFQPSNNVINSEDMK 143
>gi|148377907|ref|YP_001256783.1| putative prophage protein (ps3) [Mycoplasma agalactiae PG2]
gi|148291953|emb|CAL59344.1| Putative prophage protein (ps3) [Mycoplasma agalactiae PG2]
Length = 150
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 60/147 (40%), Gaps = 14/147 (9%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEE-PQAWKQGPV 70
YS ++ +F+ K + K+Q+ Y +L + QAW GPV
Sbjct: 4 KYSYKDISGWFLSK-----ESMTPKKLQKLTYYAEAWAYALLDDGILKDTAFQAWIHGPV 58
Query: 71 FVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
++ ++ + + IE ++ ++ + E+++++W Y S +L+ +
Sbjct: 59 SPELWKDYRDYGWNEIEKKAFDESKL-----DKNVLELLDAVWTTYGDKSGYELEAVSHS 113
Query: 131 ENKTWRRLYDPND--PNTNRTITVEEI 155
E W+ +NR I+ +++
Sbjct: 114 EE-PWKNARKGLGEFEASNRLISPDDM 139
>gi|291320632|ref|YP_003515897.1| putative prophage protein (ps3) [Mycoplasma agalactiae]
gi|290752968|emb|CBH40943.1| Putative prophage protein (ps3) [Mycoplasma agalactiae]
Length = 150
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 60/147 (40%), Gaps = 14/147 (9%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEE-PQAWKQGPV 70
YS ++ +F+ K + K+Q+ Y +L++ QAW GPV
Sbjct: 4 KYSYKDISGWFLSK-----ESMTPKKLQKLTYYAEAWAYALLDDGILNDTAFQAWIHGPV 58
Query: 71 FVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
++ ++ + IE ++ ++ + E+++++W Y S +L+ +
Sbjct: 59 SPELWKDYRNYGWDEIEKKAFDESKL-----DKNVLELLDAVWTTYGDKSGYELEAVSHS 113
Query: 131 ENKTWRRLYDPND--PNTNRTITVEEI 155
E W+ +NR I+ +++
Sbjct: 114 EE-PWKNARKGLGEFEASNRLISPDDM 139
>gi|291459459|ref|ZP_06598849.1| putative prophage ps3 protein 01 [Oribacterium sp. oral taxon 078
str. F0262]
gi|291417916|gb|EFE91635.1| putative prophage ps3 protein 01 [Oribacterium sp. oral taxon 078
str. F0262]
Length = 169
Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 54/150 (36%), Gaps = 14/150 (9%)
Query: 9 TNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQG 68
T P +A F+ + H K+Q+ Y + ++LDE +AW G
Sbjct: 25 TKHPGDIFDMATAFLSI-----ESMSHKKLQKLCYYAKAWYLALYDMNILDENFEAWVHG 79
Query: 69 PVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIV 128
V +Y R+K + I + + S +E I++ Y ++L+ +
Sbjct: 80 AVQPDLYQRYKIYGFSYIPKVANTSEI------PEEFLSFSREIFDSYGELDGDELERLN 133
Query: 129 QEENKTWRRLYDPNDPN--TNRTITVEEIT 156
E W P N I+ +++
Sbjct: 134 HTE-APWLNARGELKPWQNCNEVISEDDMK 162
>gi|325270745|ref|ZP_08137336.1| putative phage-associated protein [Prevotella multiformis DSM
16608]
gi|324986861|gb|EGC18853.1| putative phage-associated protein [Prevotella multiformis DSM
16608]
Length = 153
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 60/154 (38%), Gaps = 9/154 (5%)
Query: 12 PYSTIAVANFFIDKGVKYS-IPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV 70
P S++ AN + K I ++ ++ + +++ + + + + E P+AW GPV
Sbjct: 2 PLSSVDFANQLRNMAYKRHSINLNKTQVNKLLFMCYGFYLAFYNQRLFHEPPKAWPYGPV 61
Query: 71 FVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
F VY ++ F+ PI + + + ++ I+ + +KY S L
Sbjct: 62 FPNVYKQYSLFEV-PIYIPEEKNKEFEN---DERAKGILTQVVDKYSHISAYDLSLWSHL 117
Query: 131 ENKTWRRLY----DPNDPNTNRTITVEEITKMAD 160
W + + N+ I+ + I
Sbjct: 118 PGGPWSQTVYGIKGDKNSGWNKEISDDLIKNYFA 151
>gi|269977797|ref|ZP_06184754.1| putative phage-associated protein [Mobiluncus mulieris 28-1]
gi|269933967|gb|EEZ90544.1| putative phage-associated protein [Mobiluncus mulieris 28-1]
Length = 201
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 55/134 (41%), Gaps = 5/134 (3%)
Query: 14 STIAVANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
AVA + + + P + LK+ + +YL + + + ++D + +A++ GPV
Sbjct: 21 DPQAVAEYILMLDSRREDPDVTQLKLHKLLYLAQANYLASTGRRLMDSDVEAFRHGPVID 80
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+ +K +D I S + + + IW YQ +S L+ + ++
Sbjct: 81 AIRSTYKPYDRDIIVNRRKPSKKTTLPPDAAD---FLNRIWEMYQDNSASYLRNLTHRQD 137
Query: 133 KTWRRLYDPNDPNT 146
WR Y +T
Sbjct: 138 -PWRDNYVEGKSHT 150
>gi|283955465|ref|ZP_06372962.1| hypothetical protein C414_000470009 [Campylobacter jejuni subsp.
jejuni 414]
gi|283793038|gb|EFC31810.1| hypothetical protein C414_000470009 [Campylobacter jejuni subsp.
jejuni 414]
Length = 143
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
S + +A + + K K + +L++Q+ +Y T D + + K ++ +E +AWK GPV
Sbjct: 3 SALDLAKYILKKSNKE---LSNLELQKTLYFTELDYIKKFNKHLIKDEFEAWKYGPVSRE 59
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
VY ++ + ++ I+ + I +++ +++++ N + L E ++
Sbjct: 60 VYCEYRNYGANSIDKPEQEN---LSGILDKDELDVIDTAINNCNQETYWDLVERSHKKGG 116
Query: 134 TWRRLYDPNDPNTNRTITVEEITKMA 159
W + + + + I E I K A
Sbjct: 117 AWEKSFKED---SKEIIKKELIKKEA 139
>gi|294102139|ref|YP_003553997.1| prophage ps3 protein 01 [Aminobacterium colombiense DSM 12261]
gi|293617119|gb|ADE57273.1| prophage ps3 protein 01 [Aminobacterium colombiense DSM 12261]
Length = 143
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 59/144 (40%), Gaps = 12/144 (8%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
S VA + ++K + +K+Q+ +Y + ++ + DEE +AW GPV
Sbjct: 3 SVFDVAKYILEK----YGAVSAMKLQKLVYYSQAWSLVWDDDPLFDEEIEAWANGPVVRE 58
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
+Y + + ++++ S + + + + + Y + ++L ++ +E
Sbjct: 59 LYEKHRGIFKVHVDMMSGCSGNLTDNEKDT-----INIVCDFYNKKNAQELSDMTHQEG- 112
Query: 134 TWRRLYDPNDPNTN--RTITVEEI 155
W+ + R I+ E +
Sbjct: 113 PWKDARFGLEERERGSRIISKESM 136
>gi|237751053|ref|ZP_04581533.1| prophage ps3 protein [Helicobacter bilis ATCC 43879]
gi|229373498|gb|EEO23889.1| prophage ps3 protein [Helicobacter bilis ATCC 43879]
Length = 138
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 62/146 (42%), Gaps = 10/146 (6%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
VA + + K + +L++Q+ +Y D + + KKS++D+ +AW+ GPV
Sbjct: 2 KASDVAKYILKNSSKR---LSNLELQKTLYFAEVDFIKEHKKSLIDDNFEAWQFGPVVRD 58
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
VY ++ + ++ I+V D ++ A +E + + + S L E
Sbjct: 59 VYMEYRDYGANSIDVP-DNQEKLDLSDAEKET---IAKTIKQCNNKSYWDLVGETHREGG 114
Query: 134 TWRRLYDPNDPNTNRTITVEEITKMA 159
W + Y + I E I K A
Sbjct: 115 AWDKTY---QKGQKKIIDKELIRKEA 137
>gi|291320225|ref|YP_003515486.1| hypothetical protein MAGa3150 [Mycoplasma agalactiae]
gi|291320401|ref|YP_003515664.1| hypothetical protein MAGa5000 [Mycoplasma agalactiae]
gi|291320588|ref|YP_003515852.1| hypothetical protein MAGa6950 [Mycoplasma agalactiae]
gi|98985914|emb|CAJ32617.1| CDSE [Mycoplasma agalactiae]
gi|290752557|emb|CBH40529.1| CDSE [Mycoplasma agalactiae]
gi|290752735|emb|CBH40710.1| CDSE [Mycoplasma agalactiae]
gi|290752923|emb|CBH40898.1| CDSE [Mycoplasma agalactiae]
Length = 150
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 62/148 (41%), Gaps = 14/148 (9%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEE-PQAWKQGPV 70
YS ++N+F+ K + K+Q+ Y +L++ QAW PV
Sbjct: 4 KYSYKDISNWFLSK-----ESMTPKKLQKLTYYAEAWAYALLDDGILNDTAFQAWIHSPV 58
Query: 71 FVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
+++ +K + + I+ + ++ ++ + E+++++W Y S +L+ I
Sbjct: 59 SPELWNDYKEYGWNEIKQKVFDESKL-----DKNVLELLDAVWTTYGDKSGYELEAITHL 113
Query: 131 ENKTWRRLYDPNDPN--TNRTITVEEIT 156
E W++ + + I E++
Sbjct: 114 EE-PWKKARKGLGEFEPSTKLIDTEDMK 140
>gi|237741819|ref|ZP_04572300.1| prophage ps3 protein 01 [Fusobacterium sp. 4_1_13]
gi|229429467|gb|EEO39679.1| prophage ps3 protein 01 [Fusobacterium sp. 4_1_13]
Length = 151
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 56/143 (39%), Gaps = 12/143 (8%)
Query: 13 YSTIAVANFFI-------DKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAW 65
Y +A++FI + + + I ++K+Q+ ++ + K + + E AW
Sbjct: 2 YDVNKIADWFIWYNEYIRNFKDEDTDNISNMKLQKLLFYAQSAFLAIKGQPLFKNEILAW 61
Query: 66 KQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQ 125
+ GPV +Y ++K + I + K ++ I+N + +S L+
Sbjct: 62 EHGPVIKEIYDKYKNKGNQGITEYNVDDIKDISKDDT----NLLIDIYNLFAEYSAWGLR 117
Query: 126 EIVQEENKTWRRLYDPNDPNTNR 148
+ E W+ T++
Sbjct: 118 NLTHSE-TPWKSTKRNEVIKTDK 139
>gi|258513790|ref|YP_003190012.1| phage-associated protein [Desulfotomaculum acetoxidans DSM 771]
gi|257777495|gb|ACV61389.1| Putative phage-associated protein [Desulfotomaculum acetoxidans DSM
771]
Length = 334
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 7/129 (5%)
Query: 29 YSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEV 88
I L +Q+ +Y + E+ +AW GPV+ +Y+R+ + PIE
Sbjct: 178 RCEDITPLALQKALYYIQGFYYAFMDSFLFTEDCEAWVHGPVYREIYNRYSSYRFDPIES 237
Query: 89 IMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYD--PNDPNT 146
+ +F +++SI + +S + L+ E W + P D ++
Sbjct: 238 NDEFDVSVF----TDAEKAVIDSIIQNFCCYSGKILERFTHSE-MPWIKTRGNLPADTHS 292
Query: 147 NRTITVEEI 155
NR I+ E I
Sbjct: 293 NRKISKEII 301
>gi|194466406|ref|ZP_03072393.1| phage protein [Lactobacillus reuteri 100-23]
gi|194453442|gb|EDX42339.1| phage protein [Lactobacillus reuteri 100-23]
Length = 192
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 18/167 (10%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
PY+ + VANF +D K PI ++ + + +Y + K + E + W GPV
Sbjct: 26 PYNAMDVANFLVDFFNKKGTPITNIMLLKILYYLQAFYL-THDKKLFVENIEKWGYGPVV 84
Query: 72 VGVYHRFKYFDSHPIEV-------------IMDLSFRIFPKIANQEIGEIMESIWNKYQS 118
VY FK + I ++D S R + ++I I I+ +Y
Sbjct: 85 PVVYSYFKDNGAATITKTESYVVKNDDELLLLDPSMRKLDEADEKKISWIANKIFERY-H 143
Query: 119 HSTEQLQEIVQEENKTWRRLYDP--NDPNTNRTITVEEITKMADGSN 163
++ +L E+ E W + N + + E I+ G+N
Sbjct: 144 NNPFELVEVTHRE-PMWSESKEDILNGEHHIQYSESEIISYFEKGTN 189
>gi|291522557|emb|CBK80850.1| Uncharacterized phage-associated protein [Coprococcus catus GD/7]
Length = 144
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 58/133 (43%), Gaps = 7/133 (5%)
Query: 19 ANFFIDKGVKYSI-PIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR 77
A + + + + +K+Q+ +YL+ + K++ E+ AW+ GP VY
Sbjct: 8 ARYLVYLSYQEDRHSLTPVKLQKILYLSQGWSFVWDSKALFPEDFCAWEYGPANEKVYET 67
Query: 78 FKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRR 137
FK + I +S +A+++ + +E++WN+Y + L +++ W+
Sbjct: 68 FKKYGRSEISAAEGISG-----VADKDARDTLEAVWNEYGKRTAYDLVDLI-CSQTPWKN 121
Query: 138 LYDPNDPNTNRTI 150
N TN I
Sbjct: 122 ARADNIRITNACI 134
>gi|325000070|ref|ZP_08121182.1| hypothetical protein PseP1_14940 [Pseudonocardia sp. P1]
Length = 135
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 52/130 (40%), Gaps = 8/130 (6%)
Query: 36 LKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFR 95
+K+Q+ Y + ++ ++ + D E +AW GPV VY +K D
Sbjct: 1 MKLQKLCYYSQAWHLVWREIPLFDSEVEAWANGPV---VYDLYKLHRGKFTLSGPDDIRG 57
Query: 96 IFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPNDPNTNR----TIT 151
P+ ++ +E++ + Y S L E+ E+ WR + I+
Sbjct: 58 GNPEALDEHERFAIETVLDAYGDKSAHWLSELTHAED-PWRLAREQEGLADRERGNAVIS 116
Query: 152 VEEITKMADG 161
++ + + DG
Sbjct: 117 LDSMFEYYDG 126
>gi|256851109|ref|ZP_05556498.1| phage associated protein [Lactobacillus jensenii 27-2-CHN]
gi|260660533|ref|ZP_05861448.1| phage associated protein [Lactobacillus jensenii 115-3-CHN]
gi|256616171|gb|EEU21359.1| phage associated protein [Lactobacillus jensenii 27-2-CHN]
gi|260548255|gb|EEX24230.1| phage associated protein [Lactobacillus jensenii 115-3-CHN]
Length = 275
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 58/141 (41%), Gaps = 7/141 (4%)
Query: 8 QTNPPYSTIAVANFFI------DKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEE 61
+ P Y+ + +AN+ + + K P+ +K+ + +Y + + K +
Sbjct: 117 KIKPKYTAVQLANWLLVENYFERECNKNIDPLSQMKVIKLLYFAYGRYLASTKNKLFSSP 176
Query: 62 PQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIA-NQEIGEIMESIWNKYQSHS 120
+ GPV V+ +FK E I + + ++ ++EI E++ ++ KY ++
Sbjct: 177 IIHLQYGPVVTEVHEKFKGQTVLNDEKIEKGAIEDYNTVSQDEEISELLHAVNQKYIDYT 236
Query: 121 TEQLQEIVQEENKTWRRLYDP 141
L +I + W +
Sbjct: 237 AAGLSKITHRKGSPWSLTQEK 257
>gi|282933766|ref|ZP_06339121.1| toxin-antitoxin system, antitoxin component, Xre family
[Lactobacillus jensenii 208-1]
gi|297205974|ref|ZP_06923369.1| XRE family transcriptional regulator [Lactobacillus jensenii
JV-V16]
gi|281302145|gb|EFA94392.1| toxin-antitoxin system, antitoxin component, Xre family
[Lactobacillus jensenii 208-1]
gi|297149100|gb|EFH29398.1| XRE family transcriptional regulator [Lactobacillus jensenii
JV-V16]
Length = 307
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 58/141 (41%), Gaps = 7/141 (4%)
Query: 8 QTNPPYSTIAVANFFI------DKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEE 61
+ P Y+ + +AN+ + + K P+ +K+ + +Y + + K +
Sbjct: 149 KIKPKYTAVQLANWLLVENYFERECNKNIDPLSQMKVIKLLYFAYGRYLASTKNKLFSSP 208
Query: 62 PQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIA-NQEIGEIMESIWNKYQSHS 120
+ GPV V+ +FK E I + + ++ ++EI E++ ++ KY ++
Sbjct: 209 IIHLQYGPVVTEVHEKFKGQTVLNDEKIEKGAIEDYNTVSQDEEISELLHAVNQKYIDYT 268
Query: 121 TEQLQEIVQEENKTWRRLYDP 141
L +I + W +
Sbjct: 269 AAGLSKITHRKGSPWSLTQEK 289
>gi|110801844|ref|YP_697682.1| prophage ps3 protein 01 [Clostridium perfringens SM101]
gi|110682345|gb|ABG85715.1| putative prophage ps3 protein 01 [Clostridium perfringens SM101]
Length = 335
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 61/166 (36%), Gaps = 16/166 (9%)
Query: 17 AVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYH 76
+V N+ + + I L +Q+ +Y KK M +E +AW GPVF +Y+
Sbjct: 170 SVVNYLLCECE----DITPLALQKILYYIQGFYYAFLKKFMFEENCEAWVHGPVFRNIYY 225
Query: 77 RFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWR 136
++K + PI+ I++S+ +S + L+ E W
Sbjct: 226 KYKEYRFDPIKEESINKQFDLSISE----KVIIDSVIKNLGCYSGKVLEAFTHAE-MPWI 280
Query: 137 RLYDP--NDPNTNRTITVEEITKMADGSN-----ISPENVVEQIKK 175
T+R I I + I+P ++ + KK
Sbjct: 281 ETRGDLSASIGTDRIIDKRLIADYFNSVKEKNNMINPSDIGDYSKK 326
>gi|313678298|ref|YP_004056038.1| hypothetical protein MBOVPG45_0188 [Mycoplasma bovis PG45]
gi|312950310|gb|ADR24905.1| conserved hypothetical protein (ICEB-2 encoded) [Mycoplasma bovis
PG45]
Length = 150
Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 60/148 (40%), Gaps = 14/148 (9%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKK-SMLDEEPQAWKQGPV 70
YS ++ +F+ K + K+Q+ Y + + D QAW GPV
Sbjct: 4 KYSYKDISGWFLSK-----ESMTPKKLQKLTYYAEAWANALLGEGILSDTAFQAWVHGPV 58
Query: 71 FVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
+++ +K + + IE + + N+ I E+++++W Y S S +L+ I
Sbjct: 59 SPELWNDYKEYGWNEIEQLKPNDEKF-----NKNILELLDAVWTTYGSKSGYELEAISHS 113
Query: 131 ENKTWRRLYD--PNDPNTNRTITVEEIT 156
E W + + + + I ++
Sbjct: 114 EE-PWLKARNGLSEFEISTKIIDPADMK 140
>gi|83319679|ref|YP_424466.1| hypothetical protein MCAP_0493 [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
gi|83283565|gb|ABC01497.1| hypothetical protein MCAP_0493 [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
Length = 131
Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 51/127 (40%), Gaps = 9/127 (7%)
Query: 33 IDHLKIQQFIYLTHCDVVLQKKK-SMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMD 91
+ K+Q+ Y + + D QAW GPV ++ +K + + I +
Sbjct: 1 MTPKKLQKLTYYAEAWAYALFDEGILSDTSFQAWIHGPVSPELWRDYKNYGWNEIPKKEN 60
Query: 92 LSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPND--PNTNRT 149
+++ ++ E+++++W+ Y + +L+ I E W + + +
Sbjct: 61 NDYKL-----DKNTLELLDAVWSTYGERTGYELEAISHSE-TPWINARKGLEELEASTKL 114
Query: 150 ITVEEIT 156
I E++
Sbjct: 115 IKPEDMK 121
>gi|260664472|ref|ZP_05865324.1| phage associated protein [Lactobacillus jensenii SJ-7A-US]
gi|313472083|ref|ZP_07812575.1| toxin-antitoxin system, antitoxin component, Xre family
[Lactobacillus jensenii 1153]
gi|239530114|gb|EEQ69115.1| toxin-antitoxin system, antitoxin component, Xre family
[Lactobacillus jensenii 1153]
gi|260561537|gb|EEX27509.1| phage associated protein [Lactobacillus jensenii SJ-7A-US]
Length = 275
Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 57/141 (40%), Gaps = 7/141 (4%)
Query: 8 QTNPPYSTIAVANFFI------DKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEE 61
+ P Y+ + +AN+ + + K P+ +K+ + +Y + + K +
Sbjct: 117 KIKPKYTAVQLANWLLVENYFERECNKNIDPLSQMKVIKLLYFAYGRYLASTKNKLFSSP 176
Query: 62 PQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIA-NQEIGEIMESIWNKYQSHS 120
+ GPV V+ +FK E I + + ++ + EI E++ ++ KY ++
Sbjct: 177 IIHLQYGPVVTEVHEKFKGQTVLNDEKIEKGAIEDYNTVSQDGEISELLHAVNQKYIDYT 236
Query: 121 TEQLQEIVQEENKTWRRLYDP 141
L +I + W +
Sbjct: 237 AAGLSKITHRKGSPWSLTQEK 257
>gi|238855034|ref|ZP_04645363.1| phage associated protein [Lactobacillus jensenii 269-3]
gi|282934074|ref|ZP_06339354.1| toxin-antitoxin system, antitoxin component, Xre family
[Lactobacillus jensenii 208-1]
gi|238832405|gb|EEQ24713.1| phage associated protein [Lactobacillus jensenii 269-3]
gi|281301876|gb|EFA94140.1| toxin-antitoxin system, antitoxin component, Xre family
[Lactobacillus jensenii 208-1]
Length = 307
Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 57/141 (40%), Gaps = 7/141 (4%)
Query: 8 QTNPPYSTIAVANFFI------DKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEE 61
+ P Y+ + +AN+ + + K P+ +K+ + +Y + + K +
Sbjct: 149 KIKPKYTAVQLANWLLVENYFERECNKNIDPLSQMKVIKLLYFAYGRYLASTKNKLFSSP 208
Query: 62 PQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIA-NQEIGEIMESIWNKYQSHS 120
+ GPV V+ +FK E I + + ++ + EI E++ ++ KY ++
Sbjct: 209 IIHLQYGPVVTEVHEKFKGQTVLNDEKIEKGAIEDYNTVSQDGEISELLHAVNQKYIDYT 268
Query: 121 TEQLQEIVQEENKTWRRLYDP 141
L +I + W +
Sbjct: 269 AAGLSKITHRKGSPWSLTQEK 289
>gi|146276480|ref|YP_001166639.1| phage-associated protein-like protein [Rhodobacter sphaeroides ATCC
17025]
gi|145554721|gb|ABP69334.1| Uncharacterized phage-associated protein-like protein [Rhodobacter
sphaeroides ATCC 17025]
Length = 178
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 57/147 (38%), Gaps = 6/147 (4%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
AVAN + + + + +Q+ Y H +L M+ E +A + GP+
Sbjct: 4 DARAVANEILSRAWELGFEPTQIDVQKITYFLHGHHLLDHGVPMVQTEFEAMQYGPIQRI 63
Query: 74 VYHRFKYFDSHPIEVIM---DLSFRI---FPKIANQEIGEIMESIWNKYQSHSTEQLQEI 127
+ F+ + PI + D R+ P+I + I E ++ Y + +L ++
Sbjct: 64 LLDSFRKWADQPIGELAEKFDPVRRVHEQLPRIVDNAILETIDRYLAAYLCLPSFELVDM 123
Query: 128 VQEENKTWRRLYDPNDPNTNRTITVEE 154
N W + D + N + + +
Sbjct: 124 THARNTPWSKTVDAARNSVNIGMRISD 150
>gi|291558343|emb|CBL37143.1| Uncharacterized phage-associated protein [butyrate-producing
bacterium SSC/2]
Length = 145
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 64/147 (43%), Gaps = 6/147 (4%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
Y+ + VA++ + + P+ +L++Q+ +Y + + + + ++ QA + GP
Sbjct: 2 YNAVDVASYIVGRCANLGRPVTNLQLQKILYYVQLNFLRRFDECAFWDDIQALRHGPAVK 61
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
VY+++ + + I S + + E+++ + + +L E Q+
Sbjct: 62 EVYYKYNIWGRNEIVPRAVQSAKETFLEKD---RELIDRVTDACLLLDPWELVERSQKAG 118
Query: 133 KTWRRLYDPNDPNTNRTITVEEITKMA 159
W R + D N ++ I E + K A
Sbjct: 119 GPWHRSF---DGNLDKVIPKELMKKYA 142
>gi|317179695|dbj|BAJ57483.1| uncharacterized phage-associated protein [Helicobacter pylori F30]
Length = 145
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 67/150 (44%), Gaps = 9/150 (6%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+ + +A + + + K + +L++Q+ +Y T D + + K ++ ++ +AWK GPV
Sbjct: 3 NALELAKYILKRSNKE---LSNLELQKTLYFTELDYIKKFDKHLVSDDFEAWKYGPVARE 59
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
VY+ ++ + ++ I+ + + + E + K S L + +E+
Sbjct: 60 VYYEYRNYGANSIDKPKEETLSQNLRKDELET---INYSIEKCNEKSYWDLVKESHKEDG 116
Query: 134 TWRRLYDPNDPNTNRTITVEEITKMADGSN 163
W + + + I+ + I + A +N
Sbjct: 117 AWHKSFKEDRK---EVISKDLIKREAKQAN 143
>gi|218507675|ref|ZP_03505553.1| hypothetical protein RetlB5_08707 [Rhizobium etli Brasil 5]
Length = 113
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
Y AVAN +D+ + I + H+ +Q+ +Y H +++ K ++ +AW+ GPV
Sbjct: 5 YDPRAVANLMLDEADRLDIGVSHIVLQKLLYFAHGIYLMRTKAPLVSGYFEAWQYGPVHP 64
Query: 73 GVYHRFKYFDSHPIEVIMDLSF------RIFPKIANQEIGEIMESIW 113
Y FK I R + I +++ +
Sbjct: 65 AAYKSFKQAGKDAIAFRASGQDPLSGEPRQIQTPNDPHIVDLLRQVL 111
>gi|153873089|ref|ZP_02001787.1| phage-associated protein [Beggiatoa sp. PS]
gi|152070447|gb|EDN68215.1| phage-associated protein [Beggiatoa sp. PS]
Length = 158
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 65/162 (40%), Gaps = 13/162 (8%)
Query: 2 KKRTFTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEE 61
+K +N + +A + + K P+ +K+Q+ +Y + ++ +K + DE+
Sbjct: 7 EKLGGIMSNT--TVFDIARYIL----KKYGPMSAMKLQKLVYYSQAWSLVWDEKPLFDEQ 60
Query: 62 PQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHST 121
+AW GPV +Y+ K I+ + S +Q + + + Y S
Sbjct: 61 IEAWTNGPVVRELYNEHK--GMFLIDKTLLKSKEKHKLNEDQ--KDTINEVLKAYSGKSA 116
Query: 122 EQLQEIVQEENKTWRRLYDPNDPNTN--RTITVEEITKMADG 161
+ L + E W + N RTIT+ + + +G
Sbjct: 117 QWLSDQTHSEQ-PWILAREGLSENERGGRTITLASMAEYYEG 157
>gi|257125735|ref|YP_003163849.1| prophage protein [Leptotrichia buccalis C-1013-b]
gi|257049674|gb|ACV38858.1| putative prophage protein [Leptotrichia buccalis C-1013-b]
Length = 144
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 50/124 (40%), Gaps = 12/124 (9%)
Query: 13 YSTIAVANFFID-----KGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQ 67
Y +AN+F+ + + + + +LK Q+ +Y + K + AW
Sbjct: 2 YDVKDIANWFLIYNSYMETNQGADGMSNLKFQKLLYYAQSAYLALKNAPLFSNNIVAWNH 61
Query: 68 GPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEI 127
G V +Y ++K S I+ + ++E +I+ ++N + +S L+ +
Sbjct: 62 GSVVEEIYQKYKKCSSDDIKEFDKVDI-------DKETEKILTEVYNVFGEYSAWGLRNL 114
Query: 128 VQEE 131
E
Sbjct: 115 THTE 118
>gi|283783651|ref|YP_003374405.1| CPW-WPC domain protein [Gardnerella vaginalis 409-05]
gi|283441193|gb|ADB13659.1| CPW-WPC domain protein [Gardnerella vaginalis 409-05]
Length = 153
Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 62/153 (40%), Gaps = 10/153 (6%)
Query: 16 IAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVY 75
VA++ +D I +K+Q+ Y + + + +E+ QAW+ GPV ++
Sbjct: 5 FNVASYILDIAGT----ITTMKLQKLAYYSQAYSLATTGYPLFNEDFQAWRNGPVCPELF 60
Query: 76 --HRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
HR K+ E ++ + ++ ++E + K+ S L + E+
Sbjct: 61 ALHRGKFLIRKG-EFVLPSTDKLNDDSLTDGQKLLVEKVCKKFAECSGSDLSAMTHRED- 118
Query: 134 TWRRLYD--PNDPNTNRTITVEEITKMADGSNI 164
W+ YD + + IT + + + N+
Sbjct: 119 PWKNAYDATNSSAICVQKITKDSLKEYYSVHNL 151
>gi|283783645|ref|YP_003374399.1| hypothetical protein HMPREF0424_1204 [Gardnerella vaginalis 409-05]
gi|283442150|gb|ADB14616.1| conserved domain protein [Gardnerella vaginalis 409-05]
Length = 153
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 61/152 (40%), Gaps = 10/152 (6%)
Query: 16 IAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVY 75
VA++ +D I +K+Q+ Y + + + +E+ QAW+ GPV ++
Sbjct: 5 FNVASYILDITGT----ITTMKLQKLAYYSQAYSLAATGHPLFNEDFQAWRNGPVCPELF 60
Query: 76 --HRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
HR K+ VI + + + + ++E + K+ +S L + E+
Sbjct: 61 ALHRGKFLIRKGELVIPNTEKLQDNSLTDVQ-KILVEKVCEKFAGYSGSDLSAMTHSED- 118
Query: 134 TWRRLYD--PNDPNTNRTITVEEITKMADGSN 163
W+ YD + + IT + + N
Sbjct: 119 PWKNAYDATNSSAICVQKITKDSLKDYYSTHN 150
>gi|256847418|ref|ZP_05552864.1| prophage ps3 protein 01 [Lactobacillus coleohominis 101-4-CHN]
gi|256716082|gb|EEU31057.1| prophage ps3 protein 01 [Lactobacillus coleohominis 101-4-CHN]
Length = 156
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 62/163 (38%), Gaps = 15/163 (9%)
Query: 13 YSTIAVANFFIDKGVKYSI------PIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWK 66
Y+ + N+ K + +K+ + +Y + K M D + AWK
Sbjct: 2 YNVFEIVNWLRVKNNADMRQNPNIEELTQMKVMKLLYYIQAASLSITNKRMFDNDIVAWK 61
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKI-ANQEIGEIMESIWNKYQSHSTEQLQ 125
GPV V+ ++K + + I D R + K+ ++ I+ SI++ Y S L
Sbjct: 62 YGPVVEAVHEKYKGYRG-IVGEITDEDLRDYSKLQSDATASSILNSIYDVYGYSSAYDLM 120
Query: 126 EIVQEENKTWRRLYDPNDPNTNRTITVEEITKMADGSNISPEN 168
E K W+ + I+ E I G +S E+
Sbjct: 121 RQTHRE-KPWKET------PQSEVISDESIKNFYSGVFVSDED 156
>gi|119668697|emb|CAL23835.1| hypothetical mobile element-associated protein [Staphylococcus
aureus]
Length = 244
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 66/168 (39%), Gaps = 20/168 (11%)
Query: 4 RTFTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQ 63
+ ++ + + +A + + P LK+Q+ +Y+ + L +K + E
Sbjct: 82 KNVAKSPHGLNAMDIARYILML-----KPTTPLKLQKLLYIVYERYFLNRKIELFKERFL 136
Query: 64 AWKQGPVFVGVYHRFK-----------YFDSHPIE-VIMDLSFRIFPKIANQEIGEIMES 111
A+ GPV VY ++ I ++++IF + ++ I +++
Sbjct: 137 AFDYGPVVKEVYSVYRGQSDVLTEKDDQSVYSVISNATTPITYKIFREEDSEYISSLIKD 196
Query: 112 IWNKYQSHSTEQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKMA 159
+ ++Y S + E ++N W + Y N ITV+ I
Sbjct: 197 VIDEYDGVSAWDMVEKTHKKNTAWDKAYK---LGQNSPITVDLIKSSV 241
>gi|188528286|ref|YP_001910973.1| Uncharacterized phage-associated protein [Helicobacter pylori
Shi470]
gi|188144526|gb|ACD48943.1| Uncharacterized phage-associated protein [Helicobacter pylori
Shi470]
Length = 145
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 67/150 (44%), Gaps = 9/150 (6%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+T+ +A + + K + +L++Q+ +Y T D + + K ++ ++ +AWK GPV
Sbjct: 3 NTLELAKYILKHSNKE---LSNLELQKTLYFTELDYIKKFDKHLVSDDFEAWKYGPVARE 59
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
VY+ ++ + ++ I+ + + + E + K S L + +E+
Sbjct: 60 VYYEYRNYGANSIDKPKEETLSQNLREDELET---INHSIKKCNEKSYWDLVKESHKEDG 116
Query: 134 TWRRLYDPNDPNTNRTITVEEITKMADGSN 163
W + + + I+ + I + A +N
Sbjct: 117 AWHKSFKEDRK---EIISKDLIKQEAKQAN 143
>gi|315227132|ref|ZP_07868919.1| conserved hypothetical protein [Parascardovia denticolens DSM
10105]
gi|315119582|gb|EFT82715.1| conserved hypothetical protein [Parascardovia denticolens DSM
10105]
Length = 161
Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 62/156 (39%), Gaps = 10/156 (6%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+ + VA++ ++ + +K+Q+ Y + ++ + + DE+ QAW GPV
Sbjct: 9 TVVDVASYILN----NYGSLTTMKLQKLAYYSQAQSLVMTGRPLFDEDFQAWMNGPVVPS 64
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
++ K ++ F K+++ E I++++ + + +L +E+
Sbjct: 65 LFRLHK--GRFFVDPGFFDEFGSPEKLSD-EQKSIIDAVSSVLVRQTGRELSARTHDED- 120
Query: 134 TWRRLYDPNDPN--TNRTITVEEITKMADGSNISPE 167
W+ P IT I + + PE
Sbjct: 121 PWKDARGDCKPGDFCQTVITKAVIKDYYSKNPVIPE 156
>gi|294787309|ref|ZP_06752562.1| putative toxin-antitoxin system, antitoxin component, Xre family
[Parascardovia denticolens F0305]
gi|294484665|gb|EFG32300.1| putative toxin-antitoxin system, antitoxin component, Xre family
[Parascardovia denticolens F0305]
Length = 155
Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 62/156 (39%), Gaps = 10/156 (6%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+ + VA++ ++ + +K+Q+ Y + ++ + + DE+ QAW GPV
Sbjct: 3 TVVDVASYILN----NYGSLTTMKLQKLAYYSQAQSLVMTGRPLFDEDFQAWMNGPVVPS 58
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
++ K ++ F K+++ E I++++ + + +L +E+
Sbjct: 59 LFRLHK--GRFFVDPGFFDEFGSPEKLSD-EQKSIIDAVSSVLVRQTGRELSARTHDED- 114
Query: 134 TWRRLYDPNDPN--TNRTITVEEITKMADGSNISPE 167
W+ P IT I + + PE
Sbjct: 115 PWKDARGDCKPGDFCQTVITKAVIKDYYSKNPVIPE 150
>gi|294782259|ref|ZP_06747585.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA]
gi|294480900|gb|EFG28675.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA]
Length = 142
Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 59/143 (41%), Gaps = 6/143 (4%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+ + +A F + + PI +L++Q+ +Y + ++ +++ + +AW+ GPV
Sbjct: 2 FDAVQLAWFILRRCANSGTPISNLQLQKMLYFLQRANLQRENEALFFQNIRAWQFGPVVR 61
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
VY+ F F S I + P + + + ++ + L + ++
Sbjct: 62 EVYYTFSVFSSLKI-----IPEDSDPNPVDIILEPFLLEEIDRRSTQRPWDLVDETHQKG 116
Query: 133 KTWRRLYDPNDPNTNRTITVEEI 155
W ++ ++ I +E I
Sbjct: 117 GAWDIIFRD-GLGNDKIIPLELI 138
>gi|319440484|ref|ZP_07989640.1| hypothetical protein CvarD4_01845 [Corynebacterium variabile DSM
44702]
Length = 192
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 67/162 (41%), Gaps = 18/162 (11%)
Query: 37 KIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRI 96
++Q+ Y + + +++++ QAW GPV + H+ FD
Sbjct: 22 RLQKLTYYAQAWTLAWTGRELIEDDFQAWPDGPVSPRL-HQASKFDRDGWYSTAIPGAH- 79
Query: 97 FPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWR--RLYDPNDPNTNRTITVEE 154
P+ E +++++ + Y S +++ E+V E+ W+ R P + + ++ E
Sbjct: 80 -PENLTDEQRTMIDAVLDHYGDLSKDEIVELVHSED-PWKIARGGLPAEAKCHAMLSKEG 137
Query: 155 ITKMADGSNISPENVVEQIK--------KPVRFDSDSEFATL 188
+ + S +V Q + KPV D +FAT+
Sbjct: 138 MKRFYAVQQFSGGDVPAQPRTVQDIARQKPV----DKQFATM 175
>gi|208435383|ref|YP_002267049.1| hypothetical protein HPG27_1440 [Helicobacter pylori G27]
gi|208433312|gb|ACI28183.1| hypothetical protein HPG27_1440 [Helicobacter pylori G27]
Length = 145
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 66/150 (44%), Gaps = 9/150 (6%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+T+ +A + + K + +L++Q+ +Y T D + + K ++ ++ +AWK GPV
Sbjct: 3 NTLELAKYILKHSNKE---LSNLELQKTLYFTELDYIKKFDKHLVSDDFEAWKYGPVARE 59
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
VY+ ++ + ++ I+ + S + E + K S L + +E+
Sbjct: 60 VYYEYRNYGANSIDKPKEESLSQNLRKDELET---INRSIEKCNKKSYWDLVKESHKEDG 116
Query: 134 TWRRLYDPNDPNTNRTITVEEITKMADGSN 163
W + + + I+ I + A +N
Sbjct: 117 AWHKSFKEDGK---EIISKGLIKQEAKQAN 143
>gi|291560455|emb|CBL39255.1| Uncharacterized phage-associated protein [butyrate-producing
bacterium SSC/2]
Length = 338
Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 64/151 (42%), Gaps = 9/151 (5%)
Query: 15 TIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+A + ID + I +L +Q+ +Y L + ++ +E +AW+ GPVF +
Sbjct: 167 AEKIALYIID----SNRGITNLFLQKILYYIKAIGKLLVEYPIITDECEAWRFGPVFPNI 222
Query: 75 YHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKT 134
Y ++K F I I+DL + +E ++ + + N + ++ L+++ E
Sbjct: 223 YEKYKNFGKQEI--ILDLPVDYAKNLLTKEEKQVTDFVLNTFGIYNIWFLKDLTHMEE-P 279
Query: 135 WRRLYD--PNDPNTNRTITVEEITKMADGSN 163
W + + +N I I + N
Sbjct: 280 WLSARNGIDEEAASNNPIDDNLIDDYFEKIN 310
>gi|167768483|ref|ZP_02440536.1| hypothetical protein CLOSS21_03042 [Clostridium sp. SS2/1]
gi|167710007|gb|EDS20586.1| hypothetical protein CLOSS21_03042 [Clostridium sp. SS2/1]
Length = 357
Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 64/151 (42%), Gaps = 9/151 (5%)
Query: 15 TIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+A + ID + I +L +Q+ +Y L + ++ +E +AW+ GPVF +
Sbjct: 186 AEKIALYIID----SNRGITNLFLQKILYYIKAIGKLLVEYPIITDECEAWRFGPVFPNI 241
Query: 75 YHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKT 134
Y ++K F I I+DL + +E ++ + + N + ++ L+++ E
Sbjct: 242 YEKYKNFGKQEI--ILDLPVDYAKNLLTKEEKQVTDFVLNTFGIYNIWFLKDLTHMEE-P 298
Query: 135 WRRLYD--PNDPNTNRTITVEEITKMADGSN 163
W + + +N I I + N
Sbjct: 299 WLSARNGIDEEAASNNPIDDNLIDDYFEKIN 329
>gi|218280922|ref|ZP_03487532.1| hypothetical protein EUBIFOR_00090 [Eubacterium biforme DSM 3989]
gi|218217778|gb|EEC91316.1| hypothetical protein EUBIFOR_00090 [Eubacterium biforme DSM 3989]
Length = 177
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 14/163 (8%)
Query: 1 MKKRTFTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSML-D 59
MK N VAN+F+ K + H KIQ+ Y + +
Sbjct: 15 MKLERVISVNA--DITDVANWFLLK-----EDMSHKKIQKLCYYAEAWSETLLDAPICKN 67
Query: 60 EEPQAWKQGPVFVGVYHRFKYFDSHPI--EVIMDLSFRIFPKIANQEIGEIMESIWNKYQ 117
E QAW GPV + +++ +K + I + +F K ++ ++ EI+ S+W+ Y
Sbjct: 68 NEFQAWIHGPVNLKLWNIYKDYGWSLIHLQCTKSEEDSLFSKFSDSQL-EILNSVWHSYG 126
Query: 118 SHSTEQLQEIVQEENKTWRRLYDPNDPN--TNRTITVEEITKM 158
++S + L+ E W+ ++ I+VE + +
Sbjct: 127 AYSADTLEAQTHSE-TPWQEQRGNLQMFAPCSKVISVETMKRY 168
>gi|197294474|ref|YP_001799015.1| phage-associated protein [Candidatus Phytoplasma australiense]
gi|171853801|emb|CAM11737.1| Uncharacterized phage-associated protein [Candidatus Phytoplasma
australiense]
Length = 159
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 57/142 (40%), Gaps = 6/142 (4%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+ VA + + +K+ + IY H ++Q KK +L E+ Q W GPVF
Sbjct: 8 NVFDVALYIV---KNNPSSTTKMKLNKMIYYAHTKHLVQTKKPLLKEQIQTWIYGPVFPE 64
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
+ + K F PI ++ N+ +I++ I Y S L E+
Sbjct: 65 LCKQLKEFTYQPI--NPEVLSMGDVTKINETQKQIIDFIILLYGDKSPTFLTSQTHTEDV 122
Query: 134 TWRRLYDPNDPNTNRTITVEEI 155
W+ Y +D T I ++I
Sbjct: 123 -WKNNYYKHDVQTKNNIKNKDI 143
>gi|260888667|ref|ZP_05899930.1| toxin-antitoxin system, antitoxin component, Xre family
[Selenomonas sputigena ATCC 35185]
gi|330839922|ref|YP_004414502.1| hypothetical protein Selsp_2096 [Selenomonas sputigena ATCC 35185]
gi|260861599|gb|EEX76099.1| toxin-antitoxin system, antitoxin component, Xre family
[Selenomonas sputigena ATCC 35185]
gi|329747686|gb|AEC01043.1| hypothetical protein Selsp_2096 [Selenomonas sputigena ATCC 35185]
Length = 144
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 55/144 (38%), Gaps = 11/144 (7%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+ A + + K + I K+Q+ Y + K + E+ +AW+ GPV
Sbjct: 3 NVFDAARYILLKTGE----ISTWKLQKLCYYAQAWTLAWTGKPLFPEDFEAWRNGPVCRP 58
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
++ R K S + + D + + + ++++ + Y + QL+ E
Sbjct: 59 LFARHKGMYSVTEDFLPDGNIDAL----TADEKDSIDTVLSAYGAMEPYQLRAQTHAE-T 113
Query: 134 TWRRLYDPNDPN--TNRTITVEEI 155
W+ D ++ I+ E I
Sbjct: 114 PWKAARGSLDEMAFSDSVISKEAI 137
>gi|291561172|emb|CBL39971.1| Uncharacterized phage-associated protein [butyrate-producing
bacterium SS3/4]
Length = 148
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Query: 32 PIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMD 91
+ + KIQ+ Y + + + + + +AW GPV +YH +K + I
Sbjct: 16 SMSNKKIQKICYYAYSWYLTLYGEQLAPFQFEAWVHGPVSRELYHYYKSYGWSDIPQYHG 75
Query: 92 LSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRL 138
L + + E+ IW Y S+S ++L+++ +E W+
Sbjct: 76 LV------MVDNEMAAFARKIWTLYGSYSADELEQMSHKE-YPWQAA 115
>gi|228982581|ref|ZP_04142840.1| Uncharacterized phage-associated protein [Bacillus thuringiensis
Bt407]
gi|228776764|gb|EEM25072.1| Uncharacterized phage-associated protein [Bacillus thuringiensis
Bt407]
Length = 156
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Query: 14 STIAVANFFIDKGVK-YSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+ +A +FI KG + + K+ + +Y + + + K + EE ++ GP+
Sbjct: 7 DVLEIAKYFIFKGKNSEKYRVTNTKLHKLLYFSQGFHLAIENKPIFLEEIYMFEHGPLIK 66
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
V+ +++ + H I + F NQE E ++ IWN ++ ++++ L+EI+ +
Sbjct: 67 SVHEKYRKYTYHTIPEECNDDFSF-----NQETREFLDDIWNLFKLYTSKVLEEIITN-D 120
Query: 133 KTWRRLYDP 141
+ W+R +
Sbjct: 121 EPWKRAREN 129
>gi|257453083|ref|ZP_05618382.1| putative prophage protein (ps3) [Fusobacterium sp. 3_1_5R]
gi|317059620|ref|ZP_07924105.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
gi|313685296|gb|EFS22131.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
Length = 150
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 62/154 (40%), Gaps = 23/154 (14%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKS-------MLDEEP--Q 63
YS +A +F K + K+Q+ + + + ++ + P +
Sbjct: 2 YSIYQIAGWFFSK----EYAMSSKKLQKLCWYAYSWYIALNSDPEDGHLERLITDVPGAE 57
Query: 64 AWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQ 123
AW GPVF +Y F+Y + + + +++ + +E IWN Y S S EQ
Sbjct: 58 AWVHGPVFRDLYTDFRY---NEYTKTKNAQI----ENLDKDTLDFLERIWNVYGSFSGEQ 110
Query: 124 LQEIVQEENKTWRRLYDPND--PNTNRTITVEEI 155
L+E+ E W D ++N+ I +I
Sbjct: 111 LEEMTHNE-APWMNARKDVDKFESSNKLINDRDI 143
>gi|298252897|ref|ZP_06976691.1| uncharacterized phage-associated protein [Gardnerella vaginalis
5-1]
gi|297533261|gb|EFH72145.1| uncharacterized phage-associated protein [Gardnerella vaginalis
5-1]
Length = 147
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 58/149 (38%), Gaps = 10/149 (6%)
Query: 19 ANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVY--H 76
A + +D I +K+Q+ Y + + + +E+ QAW+ GPV ++ H
Sbjct: 2 AAYILDITGT----ITTMKLQKLAYYSQAYSLAATGHPLFNEDFQAWRNGPVCPELFALH 57
Query: 77 RFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWR 136
R K+ V+ + + + + ++E + K+ +S L + E+ W+
Sbjct: 58 RGKFLIRKGELVLPNTEKLQDNSLTDVQ-KILVEKVCEKFAGYSGSDLSAMTHSED-PWK 115
Query: 137 RLYD--PNDPNTNRTITVEEITKMADGSN 163
YD + IT + + N
Sbjct: 116 NAYDGANGSAICVQKITKDSLKDYYSTHN 144
>gi|298252891|ref|ZP_06976685.1| uncharacterized phage-associated protein [Gardnerella vaginalis
5-1]
gi|297533255|gb|EFH72139.1| uncharacterized phage-associated protein [Gardnerella vaginalis
5-1]
Length = 147
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 61/150 (40%), Gaps = 10/150 (6%)
Query: 19 ANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVY--H 76
A++ +D I +K+Q+ Y + + + +E+ QAW+ GPV ++ H
Sbjct: 2 ASYILDIAGT----ITTMKLQKLAYYSQAYSLATTGYPLFNEDFQAWRNGPVCPELFALH 57
Query: 77 RFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWR 136
R K+ E ++ + ++ ++E + K+ S L + E+ W+
Sbjct: 58 RGKFLIRKG-EFVLPSTDKLNDDSLTDGQKLLVEKVCKKFAECSGSDLSAMTHRED-PWK 115
Query: 137 RLYD--PNDPNTNRTITVEEITKMADGSNI 164
YD + + IT + + + N+
Sbjct: 116 NAYDATNSSAICVQKITKDSLKEYYSVHNL 145
>gi|217031865|ref|ZP_03437368.1| hypothetical protein HPB128_199g73 [Helicobacter pylori B128]
gi|298735512|ref|YP_003728033.1| hypothetical protein HPB8_12 [Helicobacter pylori B8]
gi|216946517|gb|EEC25119.1| hypothetical protein HPB128_199g73 [Helicobacter pylori B128]
gi|298354697|emb|CBI65569.1| conserved hypothetical protein [Helicobacter pylori B8]
Length = 145
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+ + +A + + K + +L++Q+ +Y T D + + K ++ ++ +AW+ G V
Sbjct: 3 NALELAKYILKHSDKE---LSNLELQKTLYFTELDYIKKFDKHLVSDDFEAWRYGSVARE 59
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
VY+ ++ + ++PI+ + + + E + K S L + +E+
Sbjct: 60 VYYEYRNYGANPIDKPKEETLSQNLRKDELET---INRSIEKCNKKSYWDLVKESHKEDG 116
Query: 134 TWRRLYDPNDPNTNRTITVEEITK 157
W + + + + I +++ +
Sbjct: 117 AWHKSFKED----RKEIISKDLIR 136
>gi|255324897|ref|ZP_05366006.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
gi|255298074|gb|EET77382.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
Length = 189
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 6/126 (4%)
Query: 37 KIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRI 96
K+++ Y + + ++ E QAWK GPV +Y KY S ++ +
Sbjct: 22 KLEKLTYYCQAWSLGWYGRPLVSNEFQAWKDGPVEPDLYRENKYQRSEKSSTVLPGAD-- 79
Query: 97 FPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTW--RRLYDPNDPNTNRTITVEE 154
+ E +I++++ Y ++ +L E+ E W R + NTN I+ E
Sbjct: 80 -VEAIGDEAEKIIDAVIAFYGDKTSNELIELTHSER-PWIVARGQMGPEANTNEPISQLE 137
Query: 155 ITKMAD 160
+ K
Sbjct: 138 MKKYYA 143
>gi|311741431|ref|ZP_07715255.1| XRE family transcriptional regulator [Corynebacterium
pseudogenitalium ATCC 33035]
gi|311303601|gb|EFQ79680.1| XRE family transcriptional regulator [Corynebacterium
pseudogenitalium ATCC 33035]
Length = 189
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 6/126 (4%)
Query: 37 KIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRI 96
K+++ Y + + ++ E QAWK GPV +Y KY S E +
Sbjct: 22 KLEKLAYYCQAWSLGWYGRPLVSNEFQAWKDGPVEPDLYRENKYQRS---EKTSTVLPGA 78
Query: 97 FPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTW--RRLYDPNDPNTNRTITVEE 154
+ E +I++++ Y ++ +L E+ E W R + NTN I+ E
Sbjct: 79 DVEAIGDEAEKIIDAVIAFYGDKTSNELIELTHSER-PWIVARGQMGPEANTNEPISQLE 137
Query: 155 ITKMAD 160
+ K
Sbjct: 138 MKKYYA 143
>gi|227519580|ref|ZP_03949629.1| prophage protein (ps3) [Enterococcus faecalis TX0104]
gi|257090820|ref|ZP_05585181.1| predicted protein [Enterococcus faecalis CH188]
gi|312902452|ref|ZP_07761658.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|227072967|gb|EEI10930.1| prophage protein (ps3) [Enterococcus faecalis TX0104]
gi|256999632|gb|EEU86152.1| predicted protein [Enterococcus faecalis CH188]
gi|310634122|gb|EFQ17405.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|315576894|gb|EFU89085.1| conserved hypothetical protein [Enterococcus faecalis TX0630]
Length = 154
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 63/165 (38%), Gaps = 23/165 (13%)
Query: 3 KRTFTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEP 62
+ + ++ + VA + I++ + +K+Q+ +Y + +K + +EE
Sbjct: 2 REGISMSDVKH----VARYIIEQLG----GMTTMKLQKLVYYCQAWSLAWDEKPLFEEEF 53
Query: 63 QAWKQGPVFVGVYHR----FKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQS 118
QAW GPV ++ FK D + ++ D F + E + + Y
Sbjct: 54 QAWANGPVCYELFSEHRGKFKV-DENFLQDYSDYKF-------EPDELETIGIVIEHYAE 105
Query: 119 HSTEQLQEIVQEENKTWRRLYD--PNDPNTNRTITVEEITKMADG 161
S L E+ +E W+ P ++ I E + + G
Sbjct: 106 KSPHYLSELTHKER-PWKETRGSLPLGESSTEIIPKELMQEYYAG 149
>gi|325289327|ref|YP_004265508.1| phage-associated protein-like protein [Syntrophobotulus glycolicus
DSM 8271]
gi|324964728|gb|ADY55507.1| phage-associated protein-like protein [Syntrophobotulus glycolicus
DSM 8271]
Length = 332
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 57/150 (38%), Gaps = 7/150 (4%)
Query: 11 PPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV 70
P A + +D + I L +Q+ +Y + + E+ +AW GP
Sbjct: 161 PVVEPQAKMDVVVDYLLSRCQDITPLSLQKALYYAQGFFYAFYRTYLFTEDCEAWVHGPA 220
Query: 71 FVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
+ +Y R+ + PIE + + E +++SI +S + L+
Sbjct: 221 YPKIYRRYSNYCFDPIE----GVDEVEASALSGEDQLLLDSIVKHVCCYSGKTLEAFTHT 276
Query: 131 ENKTW--RRLYDPNDPNTNRTITVEEITKM 158
E W R P + +NR +T E I +
Sbjct: 277 E-TPWVLARAGLPAEALSNRPVTKESIGEF 305
>gi|227543484|ref|ZP_03973533.1| prophage ps3 protein 01 [Lactobacillus reuteri CF48-3A]
gi|300910156|ref|ZP_07127616.1| XRE family transcriptional regulator [Lactobacillus reuteri SD2112]
gi|77745371|gb|ABB02586.1| uncharacterized phage-associated protein [Lactobacillus reuteri]
gi|227186508|gb|EEI66579.1| prophage ps3 protein 01 [Lactobacillus reuteri CF48-3A]
gi|300892804|gb|EFK86164.1| XRE family transcriptional regulator [Lactobacillus reuteri SD2112]
Length = 159
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 61/167 (36%), Gaps = 20/167 (11%)
Query: 13 YSTIAVANFFIDKGVKYSI------PIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWK 66
Y V N+ + + +K+ + +Y + K M D + AWK
Sbjct: 2 YDVFKVVNWLRVRNNADMRQNPNIEELSQMKVMKLLYYIQAASLSISGKRMFDNDIVAWK 61
Query: 67 QGPVFVGVYHRFKY-----FDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHST 121
GPV V+ ++ ++PI ++ A+++ I+ SI++ Y S
Sbjct: 62 YGPVVEAVHRKYSGCRGIVNSNYPITPQDLEDYKEL--QADEQASSILNSIYDVYGYSSA 119
Query: 122 EQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKMADGSNISPEN 168
L E K W++ NR I + I G IS EN
Sbjct: 120 YDLMRQTHSE-KPWQQT------PHNRVIKDKYIKDFYSGVFISDEN 159
>gi|254227208|ref|ZP_04920709.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|125620267|gb|EAZ48700.1| conserved hypothetical protein [Vibrio cholerae V51]
Length = 105
Score = 99.3 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
YS + VA + + +L++Q+ Y+ H + ++ ++ ++ AWK GPV
Sbjct: 7 YSAVDVAWSLLKHAKEQGKCFSNLQLQKLTYVCHGLSLAHFQRPLVVDDVFAWKFGPVVP 66
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQS 118
VY RFK + S+ I D+ + + E I++ + ++
Sbjct: 67 SVYFRFKSYGSNVITEQCDV-------VLDHESESIVKDVVSQLGH 105
>gi|110005056|emb|CAK99387.1| putative conserved prophage protein [Spiroplasma citri]
Length = 164
Score = 99.0 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 59/148 (39%), Gaps = 9/148 (6%)
Query: 16 IAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVY 75
+++ + ++K K+Q+ +Y + D + Q K + ++E +AW GPV ++
Sbjct: 14 FSISKYLVEKHDIKQ----STKLQKILYFLYLDYLKQYGKKLFEDEFEAWVYGPVVRKIF 69
Query: 76 HRFKYFDS--HPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
+ K IE ++ ++ I ++ KY S S +L E +
Sbjct: 70 NHMKDNGCIFSLIEDYKTYELTEIKELDDEGIKNFIDEDIKKYLSLSPIELVEKSH-DTL 128
Query: 134 TWRRLYD--PNDPNTNRTITVEEITKMA 159
W+ D ++ I+ E I K
Sbjct: 129 PWKETRGELEYDEPSDEVISFELIKKFV 156
>gi|322388275|ref|ZP_08061879.1| phage-associated protein family protein [Streptococcus infantis
ATCC 700779]
gi|321140947|gb|EFX36448.1| phage-associated protein family protein [Streptococcus infantis
ATCC 700779]
Length = 332
Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 58/142 (40%), Gaps = 10/142 (7%)
Query: 16 IAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVY 75
V ++ + K + I L +Q+ +Y KK + + +AW GPV+ VY
Sbjct: 166 TQVIHYLLSKNNE----ITPLALQKLLYYVQGFYFAFKKDYIFLSDCEAWVHGPVYRDVY 221
Query: 76 HRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTW 135
++ F +PI++ ++ + +++SI + + + L+E EE W
Sbjct: 222 FKYSSFGYNPIQLNLNSNPGDGLTFFE---RSLIDSILKNFAIFNGKVLEEFTHEEE-PW 277
Query: 136 --RRLYDPNDPNTNRTITVEEI 155
R + +N I E I
Sbjct: 278 LTMRGDSKAEEPSNEVIPKELI 299
>gi|15673914|ref|NP_268089.1| prophage ps3 protein 01 [Lactococcus lactis subsp. lactis Il1403]
gi|281492411|ref|YP_003354391.1| phage Cro/CI transcriptional regulator [Lactococcus lactis subsp.
lactis KF147]
gi|12724972|gb|AAK06030.1|AE006424_1 prophage ps3 protein 01 [Lactococcus lactis subsp. lactis Il1403]
gi|281376075|gb|ADA65566.1| Phage protein, transcriptional regulator, Cro/CI family
[Lactococcus lactis subsp. lactis KF147]
Length = 306
Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 59/151 (39%), Gaps = 19/151 (12%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR 77
+ N + K +Y + +K+ + +Y + K + AWK GPV +Y+
Sbjct: 160 IKNIILQKSDEYVEDLTQMKVMKLVYYAQAVSLHWYGKPLFSNPILAWKHGPVVQEIYNE 219
Query: 78 FKYFDSHPIEVIMDLSFRIFPKIA--------NQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
+ S+ I + DL I ++ N+++ +++ + + S+S L++
Sbjct: 220 Y--HGSYSI--VEDLRSEIPEELLKNYNELSVNKKMSKVLNFVQEQLGSYSAWTLRDKTH 275
Query: 130 EENKTWRRLYDPNDPNTNRTITVEEITKMAD 160
E W + I+ + I K D
Sbjct: 276 NEE-PWINT------IQSSVISNKSIKKYFD 299
>gi|197294475|ref|YP_001799016.1| phage-associated protein [Candidatus Phytoplasma australiense]
gi|197294810|ref|YP_001799351.1| phage-associated protein [Candidatus Phytoplasma australiense]
gi|171853802|emb|CAM11738.1| Uncharacterized phage-associated protein [Candidatus Phytoplasma
australiense]
gi|171854137|emb|CAM12128.1| Uncharacterized phage-associated protein [Candidatus Phytoplasma
australiense]
Length = 185
Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+ VAN+ I K + + H+K+ + IY ++ +++ KK ++ E P+AWK GP+F
Sbjct: 11 NVFDVANYIIIKFKNNNQNLTHMKLHKLIYFSYVKYLIEYKKRLILEHPKAWKYGPIFGE 70
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
+Y K + PI + R I +++ + ++ + + + ++L I ++
Sbjct: 71 LYVVLKDYFEKPIVKPL-CDGRSQKIITDEKRKKNIDEVLLLCKDKTGKELANISHQQ-S 128
Query: 134 TWRRLYD-PNDPNTNRTITVEEITKM 158
Y N + TI+ E++
Sbjct: 129 PQDETYHYYRYKNNDSTISDEDLKNF 154
>gi|13095679|ref|NP_076800.1| Orf21 [Lactococcus phage bIL311]
gi|12831101|gb|AAK08453.1|AF323672_21 Orf21 [Lactococcus phage bIL311]
Length = 306
Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 59/151 (39%), Gaps = 19/151 (12%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR 77
+ N + K +Y + +K+ + +Y + K + AWK GPV +Y+
Sbjct: 160 IKNIILQKSDEYVEDLTQMKVMKLVYYAQAVSLHWYGKPLFSNPILAWKHGPVVQEIYNE 219
Query: 78 FKYFDSHPIEVIMDLSFRIFPKIA--------NQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
+ S+ I + DL I ++ N+++ +++ + + S+S L++
Sbjct: 220 Y--HGSYSI--VEDLRSEIPEELLKNYNELSVNKKMSKVLNFVQEQLGSYSAWTLRDKTH 275
Query: 130 EENKTWRRLYDPNDPNTNRTITVEEITKMAD 160
E W + I+ + I K D
Sbjct: 276 NEE-PWINT------IQSSVISNKSIKKYFD 299
>gi|167757363|ref|ZP_02429490.1| hypothetical protein CLORAM_02913 [Clostridium ramosum DSM 1402]
gi|167703538|gb|EDS18117.1| hypothetical protein CLORAM_02913 [Clostridium ramosum DSM 1402]
Length = 182
Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 54/136 (39%), Gaps = 7/136 (5%)
Query: 3 KRTFTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEP 62
++ + Y + ++ I + + I +L++Q+ +Y + + + K +
Sbjct: 35 RKGECEMKSKYDALELSKKVISLAEENGLYISNLQLQKVMYYIQGNFMKEFNKKAFLDNI 94
Query: 63 QAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTE 122
+ W+ GPV ++ F + PI I + I ++ ++ SI S +
Sbjct: 95 ECWEYGPVIKKIWSTFNVYGRSPIRGI-NSQLNIT-----EDEKCLIISILKDKLSMNVW 148
Query: 123 QLQEIVQEENKTWRRL 138
+L + +E W+
Sbjct: 149 RLVDETHDE-LPWKNA 163
>gi|288924291|ref|ZP_06418311.1| Uncharacterized phage-associated protein-like protein [Frankia sp.
EUN1f]
gi|288344363|gb|EFC78872.1| Uncharacterized phage-associated protein-like protein [Frankia sp.
EUN1f]
Length = 201
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 62/161 (38%), Gaps = 13/161 (8%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
P + VA + + + ++ + Q+ +Y + + + + E QAW GPV
Sbjct: 2 PENVHDVAAYIVARLGA----METYRFQKLVYYSQAWHLALQGSVLFPNEVQAWVDGPVV 57
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
+Y + + S D P+ + ++ + Y S S ++L + E
Sbjct: 58 RALYEQHRRRTSVSSWPSGD------PRRLQPASKQHVDWVLATYGSFSGDELSRMTHAE 111
Query: 132 NKTWR--RLYDPNDPNTNRTITVEEITKMADGSNISPENVV 170
WR R P+D +++ I + + +SP+ V
Sbjct: 112 -APWRLARGGIPDDYSSDAAIDNKMMMDYYSRLRMSPDEAV 151
>gi|153870579|ref|ZP_01999951.1| phage-associated protein [Beggiatoa sp. PS]
gi|152072952|gb|EDN70046.1| phage-associated protein [Beggiatoa sp. PS]
Length = 150
Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 14/142 (9%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+ VA F + K P +K+Q+ +Y + ++ ++ + E+ AW GPV
Sbjct: 3 TVFDVAAFILTKLG----PTPAMKLQKLVYYSQAWSLVWDEEPLFQEKIYAWINGPVVPE 58
Query: 74 VYHRFK-YFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+Y K F E++ + P+ N+ E +E++ + Y ++ L ++ E
Sbjct: 59 LYDIHKGQFKVAATEILGN------PEALNETQKETVEAVLDYYGDKKSQWLSDLTHLE- 111
Query: 133 KTWR--RLYDPNDPNTNRTITV 152
K W+ R+ +D + IT
Sbjct: 112 KPWQDARVELASDERGHTEITH 133
>gi|171779724|ref|ZP_02920680.1| hypothetical protein STRINF_01561 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281826|gb|EDT47260.1| hypothetical protein STRINF_01561 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 157
Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 48/134 (35%), Gaps = 9/134 (6%)
Query: 16 IAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVY 75
V N+ K + LK+ + +Y + K + E+ AWK GP VY
Sbjct: 11 FKVRNYSDMKTNDNVEALTQLKVMKLLYYAQGVSLALYDKLLFPEKILAWKYGPAVQEVY 70
Query: 76 HRFKYFDSHPIEV-----IMDLSFRIFPKI-ANQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
+K S I + D + ++ ++QE I+ ++ + Y S +L
Sbjct: 71 DVYK--GSREIVDSTSNGMSDTEIGDYQEVNSDQEAALILNAVVDAYGDMSAIELMNQTH 128
Query: 130 EENKTWRRLYDPND 143
E W +
Sbjct: 129 GE-APWLETTQSQE 141
>gi|293597081|ref|ZP_05267091.2| phage protein [Listeria monocytogenes HPB2262]
gi|293585293|gb|EFF97325.1| phage protein [Listeria monocytogenes HPB2262]
Length = 176
Score = 96.6 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 60/170 (35%), Gaps = 23/170 (13%)
Query: 1 MKKRTFTQTNPPYSTIAVANFFIDKGVKYSIPI---DHLKIQQFIYLTHCDVVLQKKKSM 57
++K F A + I YS + +K+Q+ IYL + + +
Sbjct: 3 IQKGGFKMK----DVTLFARYLIHSYESYSRSLFENSEMKLQKLIYLAQRQSIALTGEIL 58
Query: 58 LDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQ 117
+ Q WK GPV + F P E + ++ I++++ N Y
Sbjct: 59 FQNDIQGWKHGPVVPEL-RYFLENGYTPYE----------GEPLSETEKYIIDNVVNTYG 107
Query: 118 SHSTEQLQEIVQEENKTWRRLY---DPNDPNTNRTITVEEITKMADGSNI 164
L+E+ E W+ + D + +E+I K A+ I
Sbjct: 108 KFEAWSLREMTHNELS-WKNSRIGLNDEDSGC-EVLKLEDIEKDAEKVRI 155
>gi|157325244|ref|YP_001468666.1| gp27 [Listeria phage B025]
gi|66733250|gb|AAY53067.1| gp27 [Listeria phage B025]
Length = 167
Score = 96.6 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 19/152 (12%)
Query: 19 ANFFIDKGVKYSIPI---DHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVY 75
A + I YS + +K+Q+ IYL + + + + Q WK GPV +
Sbjct: 8 ARYLIHSYESYSRSLFENSEMKLQKLIYLAQRQSIALTGEILFQNDIQGWKHGPVVPEL- 66
Query: 76 HRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTW 135
F P E + ++ I++++ N Y L+E+ E W
Sbjct: 67 RYFLENGYTPYE----------GEPLSETEKYIIDNVVNTYGKFEAWSLREMTHNELS-W 115
Query: 136 RRLY---DPNDPNTNRTITVEEITKMADGSNI 164
+ + D + +E+I K A+ I
Sbjct: 116 KNSRIGLNDEDSGC-EVLKLEDIEKDAEKVRI 146
>gi|223984060|ref|ZP_03634216.1| hypothetical protein HOLDEFILI_01508 [Holdemania filiformis DSM
12042]
gi|223963979|gb|EEF68335.1| hypothetical protein HOLDEFILI_01508 [Holdemania filiformis DSM
12042]
Length = 335
Score = 96.6 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 19/188 (10%)
Query: 6 FTQTNPPYSTI-AVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQA 64
+ + P S I AV +++ I L +Q+ +Y + + E +A
Sbjct: 160 ILEADEPISKIEAVVRTILNQCG----DITPLTLQKALYYIQGFYYAFHNEFLFSENCEA 215
Query: 65 WKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQL 124
W GPV+ +Y+R++ + PI L ++ ++ + + + + L
Sbjct: 216 WIHGPVYRDIYNRYRTYHFDPIIPCAPLVSPAMTEVEAA----VINCVVQYFCCYGGKTL 271
Query: 125 QEIVQEENKTWRRLYD--PNDPNTNRTITVEEITKMADGSNISPENVVEQIKKP--VRFD 180
++ +E+ W P + R I E I G ++KP +RF
Sbjct: 272 EQFTHQED-PWLNARKDLPKLTSARRIIPKESI-----GDYFMRLKEKYNMEKPEDIRFY 325
Query: 181 SDSEFATL 188
++ F T+
Sbjct: 326 AEDRFLTI 333
>gi|194246651|ref|YP_002004290.1| phage-associated protein [Candidatus Phytoplasma mali]
gi|193807008|emb|CAP18444.1| phage-associated protein [Candidatus Phytoplasma mali]
Length = 217
Score = 96.6 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 14/183 (7%)
Query: 2 KKRTFTQTNP--PYSTIAVANFFIDKGVK-YSIPIDHLKIQQFIYLTHCDVVLQKK---- 54
KK+ N + VAN+ I K K + + H+K+ + IY ++ ++Q +
Sbjct: 29 KKKELIMENKDNQINVFDVANYIITKSKKLPNNNLTHMKLHKIIYYSYISYLIQNQTSKT 88
Query: 55 KSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWN 114
K ++ E+P+AWK GPVF ++H + + I ++ ++E E++ +I
Sbjct: 89 KRLIFEKPKAWKYGPVFGQLFHILRNYYEKIITKPLEGG---NMSKIDKERAEVINNILE 145
Query: 115 KYQSHSTEQLQEIVQEENKTWRRLYDPNDPNT-NRTITVEEITKMADGSNI--SPENVVE 171
K ++ + QL EI + W + P T N TI+ + + + + + P+N+ E
Sbjct: 146 KTKNMNAVQLSEISHNQ-PPWDYTFYYYWPKTKNNTISDDLLLEFFSKNELFTQPKNLDE 204
Query: 172 QIK 174
+
Sbjct: 205 MFQ 207
>gi|153952144|ref|YP_001398842.1| prophage ps3 protein 01 [Campylobacter jejuni subsp. doylei 269.97]
gi|152939590|gb|ABS44331.1| prophage ps3 protein 01 [Campylobacter jejuni subsp. doylei 269.97]
Length = 165
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 9/153 (5%)
Query: 14 STIAVANFFID-----KGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQG 68
I VA + I S + LK+Q+ +Y + K + DEE +AW+ G
Sbjct: 2 KAIDVAKYLIAVNEQKNSDDESNSLSKLKLQKLLYYSQGYYSALYNKPLFDEEIRAWEHG 61
Query: 69 PVFVGVYHRFKYFDSHPIE-VIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEI 127
PV VY FK + + I ++ K + E E + ++ +S +L+E
Sbjct: 62 PVVKEVYDHFKNLNGNIIPASRENIPNEQELKNMSSEQQETINEVYELMGQYSAWKLREK 121
Query: 128 VQEENKTWRRLYDPNDPNTN--RTITVEEITKM 158
E W YD + + I+ E+I K
Sbjct: 122 THSE-SPWLETYDEKNKMNDEKNIISKEKIKKY 153
>gi|15837139|ref|NP_297827.1| hypothetical protein XF0537 [Xylella fastidiosa 9a5c]
gi|9105394|gb|AAF83347.1|AE003901_10 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 135
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 50 VLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIA--NQEIGE 107
+ ++ ++DE +AW+ GPV +Y+ K + S I + + + + + +
Sbjct: 1 MAVHRQPLIDEPVEAWRAGPVIRSLYNAIKQYGSSAITERLPVRWFSWGRALKIDATAAA 60
Query: 108 IMESIWNKYQSHSTEQLQEIVQEENKTWRRLYD 140
I+ S+W Y+ + +L I + E W +
Sbjct: 61 ILASVWATYRRYGGVELAAITRAEGSPWWTTWK 93
>gi|153876382|ref|ZP_02003733.1| phage-associated protein [Beggiatoa sp. PS]
gi|152067153|gb|EDN66266.1| phage-associated protein [Beggiatoa sp. PS]
Length = 123
Score = 95.9 bits (237), Expect = 7e-18, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 45/126 (35%), Gaps = 12/126 (9%)
Query: 38 IQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIF 97
+Q+ Y + +K + + +E+ QAW+ GPV +Y +++ + I + S
Sbjct: 1 MQKLCYYAQGYALAEKNQ-LFEEDFQAWQHGPVVYELYDKYRDYQWCQISEDVGES---- 55
Query: 98 PKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYD--PNDPNTNRTITVEEI 155
+ + E + + Y + L + E W + + +T E +
Sbjct: 56 ----DPRLLEYITDVVGAYGRYDGAALSTMTHRE-SPWLNARGDLDESQGSTKVMTKESM 110
Query: 156 TKMADG 161
Sbjct: 111 RNFFAA 116
>gi|194246803|ref|YP_002004442.1| Uncharacterized phage-associated protein [Candidatus Phytoplasma
mali]
gi|193807160|emb|CAP18598.1| Uncharacterized phage-associated protein [Candidatus Phytoplasma
mali]
Length = 166
Score = 95.9 bits (237), Expect = 7e-18, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 8/144 (5%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQK--KKSMLDEEPQAWKQGPVF 71
+ VAN+ I K + +LKIQ+ I+ + +++ K M +AW GPVF
Sbjct: 8 NIFDVANYII--ANKKIPDLTNLKIQKLIFYIYVVYLVKTNPKTKMFHSNIEAWPYGPVF 65
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
+Y F + I+ + + F PK+ N +E I KY + +L + +E
Sbjct: 66 PELYFALSKFHNVIIDKPLVVDF---PKVINHLPKSCIEYILQKYGNLKAYELTRQIHDE 122
Query: 132 NKTWRRLYDPNDPNTNRTITVEEI 155
W +Y N IT + I
Sbjct: 123 EL-WNDVYVDNISFEENKITDKVI 145
>gi|300362024|ref|ZP_07058201.1| XRE family transcriptional regulator [Lactobacillus gasseri JV-V03]
gi|300354643|gb|EFJ70514.1| XRE family transcriptional regulator [Lactobacillus gasseri JV-V03]
Length = 156
Score = 95.5 bits (236), Expect = 9e-18, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 53/154 (34%), Gaps = 17/154 (11%)
Query: 13 YSTIAVANFFIDKGVKY------SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWK 66
Y + N+ + + + +K + +Y ++ K M D + AWK
Sbjct: 2 YDVFKIVNWLRVRNNADLRTDLNAEELTQMKAMKLLYYIQAASLVVTNKRMFDNDIVAWK 61
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPK--IANQEIGEIMESIWNKYQSHSTEQL 124
GPV V+H KY I + K + E I+ SI++ Y S L
Sbjct: 62 YGPVVEEVHH--KYAGCRGIVGQISKQDVEDYKELENDDEAAAILNSIYDTYGHSSAYDL 119
Query: 125 QEIVQEENKTWRRLYDPNDPNTNRTITVEEITKM 158
E W+ N+ I+ ++I
Sbjct: 120 MRQTHSER-PWQETTR------NQVISDKKIKDF 146
>gi|288801930|ref|ZP_06407371.1| phage protein [Prevotella melaninogenica D18]
gi|288335365|gb|EFC73799.1| phage protein [Prevotella melaninogenica D18]
Length = 156
Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 62/145 (42%), Gaps = 13/145 (8%)
Query: 14 STIAVANFFIDKGVKY-SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+A++ + K ID +K+ + +YLT + +++ + + +++ +AWK GPV
Sbjct: 3 DVQQIASYISQRYEKEYGRQIDEMKLHKLLYLTQREAIIETGEPLFEDQFEAWKYGPV-- 60
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+Y K F + L + + + ++ + +++ Y + L + E
Sbjct: 61 -LYSVHKAFQTD------KLHGEMLSEETIGKYKKVFDKVFSSYAPKDSWSLSTLSHGEY 113
Query: 133 KTWRRLYD--PNDPNTNRTITVEEI 155
WR+ + D I VE+I
Sbjct: 114 S-WRKAREGYDPDSACRAKIRVEDI 137
>gi|300812871|ref|ZP_07093266.1| putative toxin-antitoxin system, antitoxin component, Xre family
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300496207|gb|EFK31334.1| putative toxin-antitoxin system, antitoxin component, Xre family
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 307
Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 52/133 (39%), Gaps = 7/133 (5%)
Query: 11 PPYSTIAVAN------FFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQA 64
P ++ + +AN +F + + P+ +K+ + +Y + +++ +
Sbjct: 152 PKFTAVQLANWLRVENYFGRELDENVEPLTQMKLIKLLYFAYGRYLVKTHNKLFTSSIVH 211
Query: 65 WKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIA-NQEIGEIMESIWNKYQSHSTEQ 123
+ GPV V+ +FK +F + ++ + +I ++ + Y ++S
Sbjct: 212 LQYGPVITEVHSKFKGLTVLDTGKPSKEAFDDYNLVSKDSDISHLLRLVNEDYINYSASG 271
Query: 124 LQEIVQEENKTWR 136
L + + W
Sbjct: 272 LSQKTHQPGSPWS 284
>gi|116511895|ref|YP_809111.1| phage-associated protein [Lactococcus lactis subsp. cremoris SK11]
gi|116107549|gb|ABJ72689.1| Uncharacterized phage-associated protein [Lactococcus lactis subsp.
cremoris SK11]
Length = 303
Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 19/151 (12%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR 77
+ N + K +Y + +K+ + +Y + K + AWK GPV +++
Sbjct: 157 IKNIILQKSDEYVEDLTQMKVMKLVYYAQAVSLHWYGKPIFSNPILAWKHGPVVQEIFNE 216
Query: 78 FKYFDSHPIEVIMDLSFRIFPKIA--------NQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
+ S+ I + DL I ++ N+++ +++ + + S+S L++
Sbjct: 217 Y--HGSYSI--VEDLRSEIPEELLKNYNELSVNKKMNKVLNFVQEQLGSYSAWTLRDKTH 272
Query: 130 EENKTWRRLYDPNDPNTNRTITVEEITKMAD 160
E W + I+ + I K D
Sbjct: 273 NEE-PWINT------IQSSVISNKSIKKYFD 296
>gi|229821013|ref|YP_002882539.1| hypothetical protein Bcav_2529 [Beutenbergia cavernae DSM 12333]
gi|229566926|gb|ACQ80777.1| conserved hypothetical protein [Beutenbergia cavernae DSM 12333]
Length = 150
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 53/141 (37%), Gaps = 13/141 (9%)
Query: 17 AVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYH 76
VA + K + +K+Q+ +Y ++ ++ +++ + D QAW GPV +Y
Sbjct: 6 DVAAHILAK----QGGMTAMKLQKLVYYSYAWHLVWEERELFDAPIQAWANGPVIYDLYR 61
Query: 77 RFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWR 136
+ + + + + E ++ + Y + +L E+ E W+
Sbjct: 62 HHRG------QFHVSTWPLGDAEALDTGERESIDIVLGFYSDKTAHELSELTHSE-APWQ 114
Query: 137 RLYD--PNDPNTNRTITVEEI 155
P ++ IT I
Sbjct: 115 DARGDLPAGSRSSTQITTTSI 135
>gi|255034589|ref|YP_003085210.1| phage-associated protein [Dyadobacter fermentans DSM 18053]
gi|254947345|gb|ACT92045.1| phage-associated protein [Dyadobacter fermentans DSM 18053]
Length = 165
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 51/126 (40%), Gaps = 12/126 (9%)
Query: 32 PIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFK-------YFDSH 84
+ HLK+Q+ +Y + + + +++ +AW GPV V+ K
Sbjct: 26 DMSHLKLQKLLYYAQAYHLAYFENPLTEDDFEAWVHGPVSRKVFDLLKDKSLLYVDLKYV 85
Query: 85 PIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTW---RRLYDP 141
P E + + P + +E + + + ++ S +L+ + E W R+ ++P
Sbjct: 86 PEEGTQSPAGYLQPSLT-KEQIDWVNYVLGEFSGLSGPELEALTHSE-APWIDARKGFEP 143
Query: 142 NDPNTN 147
D N
Sbjct: 144 ADRCNN 149
>gi|288802236|ref|ZP_06407676.1| putative prophage ps3 protein 01 [Prevotella melaninogenica D18]
gi|288335203|gb|EFC73638.1| putative prophage ps3 protein 01 [Prevotella melaninogenica D18]
Length = 178
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 56/148 (37%), Gaps = 16/148 (10%)
Query: 17 AVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKK--KSMLDEEPQAWKQGPVFVGV 74
VA + + + + LK+Q+ +Y ++ K++ + PQAW GPV+ +
Sbjct: 6 DVARYIGLSLINKGLSVSPLKLQKILYYVQSWNMVIFGRNKTLFAQAPQAWVNGPVYPEI 65
Query: 75 YHRFKY-------------FDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHST 121
Y+ +K F + + L +++ E+++SI+ Y S S
Sbjct: 66 YYEYKDKVPNMCDYLDETNFGTDSAHIDKTLQELAEKLSFSKDQIELLDSIFMLYGSKSQ 125
Query: 122 EQLQEIVQEENKTWRRLYDPNDPNTNRT 149
L + E K W +P
Sbjct: 126 NDLIFLTHSE-KPWVEARGSLNPFQRSG 152
>gi|238855367|ref|ZP_04645679.1| prophage ps3 protein 01 [Lactobacillus jensenii 269-3]
gi|260664917|ref|ZP_05865768.1| prophage ps3 protein 01 [Lactobacillus jensenii SJ-7A-US]
gi|282934597|ref|ZP_06339844.1| toxin-antitoxin system, antitoxin component, Xre family
[Lactobacillus jensenii 208-1]
gi|313472536|ref|ZP_07813026.1| toxin-antitoxin system, antitoxin component, Xre family
[Lactobacillus jensenii 1153]
gi|238832028|gb|EEQ24353.1| prophage ps3 protein 01 [Lactobacillus jensenii 269-3]
gi|239529971|gb|EEQ68972.1| toxin-antitoxin system, antitoxin component, Xre family
[Lactobacillus jensenii 1153]
gi|260561400|gb|EEX27373.1| prophage ps3 protein 01 [Lactobacillus jensenii SJ-7A-US]
gi|281301349|gb|EFA93646.1| toxin-antitoxin system, antitoxin component, Xre family
[Lactobacillus jensenii 208-1]
Length = 183
Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Query: 13 YSTIAVANFFIDKGVKY-------SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAW 65
Y+ V N+F K V+ + P+ +K+ + +Y +++ + + D + AW
Sbjct: 2 YNVFKVVNWFRLKNVEELVSEDVNAEPLTQMKVMKLLYYAQATFLVKYGQRLFDSDILAW 61
Query: 66 KQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQ 125
K GPV V+ +++ + + +++ +++ +++ + S+S L
Sbjct: 62 KFGPVVAEVHDKYRGRRIIVESISYEAYQDFSTLESDKRASQVLNAVYIAFGSYSASTLM 121
Query: 126 EIVQEENKTWRRL 138
+ E W+
Sbjct: 122 KKTHTE-MPWKST 133
>gi|332707571|ref|ZP_08427606.1| hypothetical protein LYNGBM3L_49210 [Lyngbya majuscula 3L]
gi|332353655|gb|EGJ33160.1| hypothetical protein LYNGBM3L_49210 [Lyngbya majuscula 3L]
Length = 78
Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 14 STIAVANFFIDKGVKYSIP--IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
+ A +FI K + + ++K+Q+ +Y + + + DEE QAW+ GPV
Sbjct: 3 DCLNAARYFIVKAYDDGMEAEMTNMKLQKLLYYAQSLHLALYDQPLFDEEIQAWRYGPVC 62
Query: 72 VGVYHRFKYFDSH 84
Y + F++
Sbjct: 63 PSAYRFYSEFEAK 75
>gi|256851089|ref|ZP_05556478.1| prophage ps3 protein 01 [Lactobacillus jensenii 27-2-CHN]
gi|260660513|ref|ZP_05861428.1| prophage ps3 protein 01 [Lactobacillus jensenii 115-3-CHN]
gi|282933745|ref|ZP_06339100.1| toxin-antitoxin system, antitoxin component, Xre family
[Lactobacillus jensenii 208-1]
gi|297205953|ref|ZP_06923348.1| XRE family transcriptional regulator [Lactobacillus jensenii
JV-V16]
gi|256616151|gb|EEU21339.1| prophage ps3 protein 01 [Lactobacillus jensenii 27-2-CHN]
gi|260548235|gb|EEX24210.1| prophage ps3 protein 01 [Lactobacillus jensenii 115-3-CHN]
gi|281302124|gb|EFA94371.1| toxin-antitoxin system, antitoxin component, Xre family
[Lactobacillus jensenii 208-1]
gi|297149079|gb|EFH29377.1| XRE family transcriptional regulator [Lactobacillus jensenii
JV-V16]
Length = 183
Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Query: 13 YSTIAVANFFIDKGVKYSI-------PIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAW 65
Y+ V N+F K V+ + P+ +K+ + +Y +++ + + D + AW
Sbjct: 2 YNVFKVVNWFRLKNVEELVSEDVNVEPLTQMKVMKLLYYAQATFLVKYGQRLFDSDILAW 61
Query: 66 KQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQ 125
K GPV V+ +++ + + + ++ +++ +++ + S+S L
Sbjct: 62 KFGPVIAEVHDKYRGKRNIVESISYEAYQDFNTLESDIRASQVLNAVYIAFGSYSASTLM 121
Query: 126 EIVQEENKTWRRL 138
+ E W+
Sbjct: 122 KKTHTE-MPWKST 133
>gi|293189228|ref|ZP_06607951.1| hypothetical protein HMPREF0970_00262 [Actinomyces odontolyticus
F0309]
gi|292821691|gb|EFF80627.1| hypothetical protein HMPREF0970_00262 [Actinomyces odontolyticus
F0309]
Length = 177
Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 61/156 (39%), Gaps = 14/156 (8%)
Query: 2 KKRTFTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEE 61
+++ S + VA + +++ + +K+Q+ + + + Q S+ E+
Sbjct: 23 QQKGIDMAQ---SIVDVATYILERTGT----VTTMKLQKLAFYSQAQHLAQYGSSLFPED 75
Query: 62 PQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHST 121
+AW+ GPV +Y + +L + + E +++S+ + +
Sbjct: 76 FEAWRGGPVAPELYA---LHRGMFLIRPGELVSGGSSALTDAE-RALIDSVCSALGDMTG 131
Query: 122 EQLQEIVQEENKTWRRLYDPNDPN--TNRTITVEEI 155
+L E E W + P+ +N IT E +
Sbjct: 132 AELSERTHLE-SPWLDAREGLAPSVPSNAVITQEAM 166
>gi|257467044|ref|ZP_05631355.1| putative prophage protein [Fusobacterium gonidiaformans ATCC 25563]
gi|315918181|ref|ZP_07914421.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
gi|313692056|gb|EFS28891.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
Length = 145
Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 47/130 (36%), Gaps = 12/130 (9%)
Query: 28 KYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIE 87
K + I +L +Q+ +Y +++ +E+ +AW GPV VY FK
Sbjct: 14 KTNPNISNLVLQKLLYFIQASLLVTTGNPAFEEDIEAWMYGPVVPEVYDNFKK------- 66
Query: 88 VIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPNDPNTN 147
D + + I EI+ +I + L + W+ +D
Sbjct: 67 -DKDYYNQFETNQLDSNIQEIVVNITKNLGKINPYSLVNATHGYDT-WKEAWDRGGW--- 121
Query: 148 RTITVEEITK 157
TI ++ K
Sbjct: 122 NTIISQDKIK 131
>gi|313885524|ref|ZP_07819274.1| conserved hypothetical protein [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619254|gb|EFR30693.1| conserved hypothetical protein [Eremococcus coleocola
ACS-139-V-Col8]
Length = 171
Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 68/152 (44%), Gaps = 16/152 (10%)
Query: 14 STIAVANFFI---DKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV 70
+A + I ++ K S D + +Q+ +Y + + ++DEE + WK GPV
Sbjct: 4 KVQNIAKYLIYSYEQITKSSFNNDEITLQKLMYFAQKTSLAFLGEPIIDEEFEGWKHGPV 63
Query: 71 FVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
+ F+Y+ + + +I +++ E ++++ Y ++ L+ + E
Sbjct: 64 LPSLRFFFEYY---------NPNEQIDEQLSESE-KYVIDNTIYLYGKYAPWTLRNMSHE 113
Query: 131 ENKTWR--RLYDPNDPNTNRTITVEEITKMAD 160
EN W+ R+ + + I +E+I K A+
Sbjct: 114 EN-AWKISRVGLAEGESGSCKINIEDIKKDAE 144
>gi|85059617|ref|YP_455319.1| hypothetical protein SG1639 [Sodalis glossinidius str. 'morsitans']
gi|85060326|ref|YP_456028.1| hypothetical protein SG2348 [Sodalis glossinidius str. 'morsitans']
gi|84780137|dbj|BAE74914.1| hypothetical phage protein [Sodalis glossinidius str. 'morsitans']
gi|84780846|dbj|BAE75623.1| hypothetical phage protein [Sodalis glossinidius str. 'morsitans']
Length = 172
Score = 92.8 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 51/120 (42%), Gaps = 5/120 (4%)
Query: 14 STIAVANFFIDKGVKYS--IPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
+AN+F+ + + K+Q+ +Y + K + +E+ +A GPV
Sbjct: 17 DCFDLANYFLVRNQNEGCGDVMTSTKLQRLVYYAQVFALSLLGKPLFNEKVEASPDGPVV 76
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
+ R++Y+ + P+ V +I + I++ + Y +S +L E+ + E
Sbjct: 77 HALKLRYRYYKNEPLPV---PPVKIDMSKFTPDEAAILDKVHRIYGQYSGWKLHEMARSE 133
>gi|308234821|ref|ZP_07665558.1| Putative phage-associated protein [Gardnerella vaginalis ATCC
14018]
gi|311114496|ref|YP_003985717.1| phage-associated protein family protein [Gardnerella vaginalis ATCC
14019]
gi|310945990|gb|ADP38694.1| phage-associated protein family protein [Gardnerella vaginalis ATCC
14019]
Length = 369
Score = 92.4 bits (228), Expect = 8e-17, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 66/185 (35%), Gaps = 31/185 (16%)
Query: 20 NFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFK 79
N I + I L +Q+ +Y K + ++ QAW GPV+ VY R+K
Sbjct: 180 NNVIQYLLIKCEDITTLALQKSLYYIQGFYFAFYKSFIFTDDCQAWIHGPVYKDVYLRYK 239
Query: 80 YFDSHPIEVIMDLSFRI-----------------------FPKIANQEIGEIMESIWNKY 116
+ PI+ I + + +S+ +
Sbjct: 240 DYTFTPIDSPTTEISGIKSSEKLADYKHVQKSDVTLFTSELTTTLSATEKAVCDSVIDNL 299
Query: 117 QSHSTEQLQEIVQEENKTW------RRLYDPNDPNTNRTITVEEITKMADGSN-ISPENV 169
+S ++L+ E W + D ++ ++ I E TK+ + N I+P+++
Sbjct: 300 CCYSGKELERFTHHEE-PWILTRGNLKTNDSSNKIISKKIIGEYFTKIKEKYNMINPDDI 358
Query: 170 VEQIK 174
+ K
Sbjct: 359 RQYAK 363
>gi|150016592|ref|YP_001308846.1| prophage ps3 protein 01, [Clostridium beijerinckii NCIMB 8052]
gi|149903057|gb|ABR33890.1| prophage ps3 protein 01, putative [Clostridium beijerinckii NCIMB
8052]
Length = 336
Score = 92.0 bits (227), Expect = 9e-17, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 17 AVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYH 76
AV + + + L IQ+ +Y + M +E+ +AWK GP + +Y
Sbjct: 167 AVIKYLLIRCE----DFTALSIQKLLYYVQAFHYVFTGNFMFEEDCEAWKDGPFYPSLYE 222
Query: 77 RFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTW 135
R++ F I D+ ++ N E I+ESI Y +S + L+E+ + E W
Sbjct: 223 RYEQFGYEKI--NKDIMANDKLRLENFE-RNIVESIIKFYGCYSGKILKEMTKSE-APW 277
>gi|256841944|ref|ZP_05547449.1| phage-associated protein [Parabacteroides sp. D13]
gi|256736260|gb|EEU49589.1| phage-associated protein [Parabacteroides sp. D13]
Length = 155
Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 48/142 (33%), Gaps = 10/142 (7%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
S VA + + + + +K+ + +Y ++ +KS+ E +AW GPV
Sbjct: 13 SVYDVATYILKQIKE----CSTMKLHKLLYYCQAWSLVWDEKSLFPEPIEAWANGPVVRD 68
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
F F + D + + + ++++ Y + L ++ E
Sbjct: 69 ----FFNFHKGRYSISYDNMTIGNENKLSIDQKDTIDNVLKFYGDKPAQWLIDLTHTE-A 123
Query: 134 TWRRLYDPNDPNTN-RTITVEE 154
W+ TI +
Sbjct: 124 PWKNARKGYTSMERGNTIITND 145
>gi|194246654|ref|YP_002004293.1| hypothetical protein, phage-associated [Candidatus Phytoplasma
mali]
gi|193807011|emb|CAP18447.1| hypothetical protein, phage-associated [Candidatus Phytoplasma
mali]
Length = 157
Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 56/147 (38%), Gaps = 7/147 (4%)
Query: 13 YSTIAVANFFIDKGVKY-SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
++ + + ++ K I ++Q+ +Y + ++ + + EE AW GP+
Sbjct: 7 FNIFDIGKYLLENCRKKYGTGIT--QLQKLLYYAQAEYLVCYNQPLFLEEIHAWDFGPIV 64
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
VY F + + E ++ ++ +I+ + K + + L + E
Sbjct: 65 PSVYFEFIRYLA---ESKDIFKYKCSKHPLPSKVIKILNLVLEKNGNKDSRTLTAQTRNE 121
Query: 132 NKTWRRLYDPNDPNTNRTITVEEITKM 158
W+ Y PN + I+ +I
Sbjct: 122 -APWKTTYYPNKKISIAIISTAKIYNF 147
>gi|315037425|ref|YP_004030993.1| phage Cro/CI transcriptional regulator [Lactobacillus amylovorus
GRL 1112]
gi|312275558|gb|ADQ58198.1| phage Cro/CI transcriptional regulator [Lactobacillus amylovorus
GRL 1112]
Length = 157
Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 52/136 (38%), Gaps = 13/136 (9%)
Query: 13 YSTIAVANFFIDKGVKY------SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWK 66
Y+ V N+ + + + +K + +Y ++ K M D + AWK
Sbjct: 2 YNVFQVVNWLRVRNNADLRIDPNAEELTQMKAMKLLYYIQAASLVFTGKRMFDNDIVAWK 61
Query: 67 QGPVFVGVYHRFKYFDSHPI--EVIMDLSFRIFPKI--ANQEIGEIMESIWNKYQSHSTE 122
GPV V++++K I ++ D K ++ + I+ +I++ Y S
Sbjct: 62 YGPVVTEVHNKYK--GQRGIVGDIGNDPQALEDYKTLQNDKGVSYILNNIYDIYGHSSAH 119
Query: 123 QLQEIVQEENKTWRRL 138
L E K W+
Sbjct: 120 DLMVQTHSE-KPWQDT 134
>gi|293400463|ref|ZP_06644608.1| conserved hypothetical protein [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291305489|gb|EFE46733.1| conserved hypothetical protein [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 247
Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 63/154 (40%), Gaps = 16/154 (10%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
S +A+F + +P LK+Q+ +YL + D +++ + +E+ A+K GP
Sbjct: 95 SANDLASFILSI-----VPCSKLKLQKLVYLCYADFLVKYDMKLFEEKIYAFKYGPFIKE 149
Query: 74 VYHRFKYFDSHPI--EVIMDLSFRIFPKIA----NQEIGEIMES---IWNKYQSHSTEQL 124
+ ++K I E+ + I P +A ++ EI+ S KY S L
Sbjct: 150 IDGKYKTRGKERIKDELYEFTNSEIPPLLARMVFSKNGKEIVNSCLLTIGKYADKSPANL 209
Query: 125 QEIVQEENKTWRRLYDPNDPNTNRTITVEEITKM 158
I + W R Y N IT E I K
Sbjct: 210 INITHTKGGPWDRTYVVNKR--YLEITDECIKKY 241
>gi|228983062|ref|ZP_04143321.1| hypothetical protein bthur0002_61960 [Bacillus thuringiensis
Bt407]
gi|228777245|gb|EEM25553.1| hypothetical protein bthur0002_61960 [Bacillus thuringiensis
Bt407]
Length = 154
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 18 VANFFIDKGV-KYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYH 76
+A I+K + I HLK+Q+ +Y + + M ++ AW GPV +Y+
Sbjct: 3 IAQELINKSKPNTNESITHLKLQKLLYYAQGWNLGIHGEPMFTDDIHAWVNGPVVPTIYN 62
Query: 77 RFKYFDSHPIEVI 89
RFK ++ I I
Sbjct: 63 RFKRYEYFEIGKI 75
>gi|260904045|ref|ZP_05912367.1| putative prophage protein [Brevibacterium linens BL2]
Length = 257
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 43/128 (33%), Gaps = 16/128 (12%)
Query: 32 PIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMD 91
+ K + +Y T + + + AW+ GP Y F +
Sbjct: 96 EVSVTKAMKLVYYTQAWSLAWTGQDAFSDPVVAWQYGPTTELAYKNF--------TATVP 147
Query: 92 LSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPNDPNTN--RT 149
S I + E+ ++++I Y + QL + E W++ ++ R
Sbjct: 148 RSDGI-----SAELKSVVDAIVGYYNQFTATQLVDRTHSE-SPWKKTFNSLSGGHEAGRA 201
Query: 150 ITVEEITK 157
I ++ K
Sbjct: 202 IAPTDMKK 209
>gi|258509050|ref|YP_003171801.1| phage-related infection protein [Lactobacillus rhamnosus GG]
gi|257148977|emb|CAR87950.1| Phage-related infection protein [Lactobacillus rhamnosus GG]
gi|259650341|dbj|BAI42503.1| hypothetical phage protein [Lactobacillus rhamnosus GG]
Length = 309
Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 55/146 (37%), Gaps = 12/146 (8%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR 77
V N+F K + + +K+ + +Y + + + + A GPV V+
Sbjct: 168 VRNYFSLKTDPNAEELTQMKVVKLLYFAFGRWIAKTGGELFTSKIIAMPYGPVVEDVHK- 226
Query: 78 FKYFDSHPI--EVIMDLSFRIFPKI-ANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKT 134
KY I + + +F F + ++++I +++ + N ++ ++ L + +
Sbjct: 227 -KYNGRRGIVPQTLEKSAFEDFNLVQSDRKIADLLRKVDNDFRGYTAAGLVHLTHRKGSP 285
Query: 135 WRRLYDPNDPNTNRTITVEEITKMAD 160
W I + I K D
Sbjct: 286 WDVTRSG-------VIAPQLIKKTFD 304
>gi|227502127|ref|ZP_03932176.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49725]
gi|227077111|gb|EEI15074.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49725]
Length = 201
Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 66/165 (40%), Gaps = 19/165 (11%)
Query: 33 IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVY-HRFKYFDSH---PIEV 88
+D LK+ + Y + + M EE QAW+ GPV ++ ++ SH PI
Sbjct: 18 VDKLKLYKLCYFSQGWHFAWTGRPMFCEEFQAWRHGPVSRELHARTWQVAGSHRPWPIPC 77
Query: 89 IMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYD--PNDPNT 146
+ + + E+++SI Y +L ++ W + D +
Sbjct: 78 VPGG----LTENLSAYEREVVDSIIAFYGGVDFTKLSDLSH--GLAWNKARRGIAKDQKS 131
Query: 147 NRTI----TVEEITKMADGSNISPENVVE--QIKKP-VRFDSDSE 184
N + ++E ++ D +P++ ++ +I P V D D E
Sbjct: 132 NEVLQATAILQEFSQALDSRKPTPQSPLQSPEILLPNVELDGDVE 176
>gi|297588135|ref|ZP_06946779.1| conserved hypothetical protein [Finegoldia magna ATCC 53516]
gi|297574824|gb|EFH93544.1| conserved hypothetical protein [Finegoldia magna ATCC 53516]
Length = 164
Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 65/160 (40%), Gaps = 18/160 (11%)
Query: 16 IAVANFFI-DKGVKYSIPI-DHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
V + I + I LK+Q+ +Y + + + + DEE + W GPV
Sbjct: 5 FEVTKYLIYSYERQTGNRIQSELKLQKLMYFSQRESLCLTGHQLFDEEFEGWIHGPVLPS 64
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
+ + + + IE L+ +E ++++ +Y + L+++ EE
Sbjct: 65 LRYCLENSEVFDIEGGFSLT---------EEEKYVIDNTIAQYAKYDAWYLRDLSHEEYC 115
Query: 134 TWRRLYD---PNDPNTNRTITVEEITKMADGSNISPENVV 170
W++ + N+ I +++I D +N+ P + V
Sbjct: 116 -WQKSREGLTDRQQGFNK-IKLDDIR--VDANNLRPYDSV 151
>gi|331002405|ref|ZP_08325923.1| hypothetical protein HMPREF0491_00785 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330410221|gb|EGG89655.1| hypothetical protein HMPREF0491_00785 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 164
Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 66/155 (42%), Gaps = 16/155 (10%)
Query: 15 TIAVANFFIDKGVK-YSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
I VA + D+ K ID +K+ + +Y + + + + +E + W+ GPV V
Sbjct: 4 AINVARYICDEYRKMSGEAIDEMKLHKLLYFSQRESFAITGEPLFIDEFEGWRYGPVCVA 63
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
V F FD I + I+++ I I+ ++ +Y ++ +L ++ +E
Sbjct: 64 VRKSF--FDGEIIS-------KETENISDKYIY-IVSNVIAQYGELASWKLSKLSHDETS 113
Query: 134 TWRRLYDPNDPNTN--RTITVEEITKMADGSNISP 166
W+ + N +++E+I D + P
Sbjct: 114 -WKNARKGLSTSENGYNKLSLEDIEN--DAKKVRP 145
>gi|308185287|ref|YP_003929420.1| phage-associated protein [Helicobacter pylori SJM180]
gi|308061207|gb|ADO03103.1| phage-associated protein [Helicobacter pylori SJM180]
Length = 145
Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 63/144 (43%), Gaps = 10/144 (6%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+T+ +A + K + +L++Q+ +Y T D + + K ++ ++ +AWK G V
Sbjct: 3 NTLELAQYIFKHSNKE---LSNLELQKTLYFTELDYIKKFDKHLVSDDFEAWKYGLVARE 59
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
VY+ ++ + ++ I+ + + + E + K S L + +EN
Sbjct: 60 VYYEYRNYGANSIDKPKEETLSQNLRKDELET---INHSIEKCNEKSYWDLVKESYKENG 116
Query: 134 TWRRLYDPNDPNTNRTITVEEITK 157
W + + + + I +++ K
Sbjct: 117 AWHKSFKED----RKEIISKDLIK 136
>gi|237739590|ref|ZP_04570071.1| gp27 [Fusobacterium sp. 2_1_31]
gi|229423198|gb|EEO38245.1| gp27 [Fusobacterium sp. 2_1_31]
Length = 176
Score = 89.3 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 16/158 (10%)
Query: 16 IAVANF-FIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+ VA + F + ID +K+Q+ +Y + + + K M E+ + WK GPV V
Sbjct: 19 LNVAEYIFKEYQRVTGEYIDEMKLQKLLYFSQRESLAILNKPMFSEKFEGWKYGPVSREV 78
Query: 75 YHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKT 134
F + + + + E I+ ++ +Y S ++ +L E+ +E
Sbjct: 79 RTYF----------TQEDGIQTYTEDIKSENKYIVNNVILEYGSLASWKLSEMTHKEIS- 127
Query: 135 W--RRLYDPNDPNTNRTITVEEITKMADGSNISPENVV 170
W R + N N+ I +E+I + D + P + +
Sbjct: 128 WLNSRKGLSENENGNKKIELEDIRE--DAKKVRPYDYI 163
>gi|256846086|ref|ZP_05551544.1| gp27 [Fusobacterium sp. 3_1_36A2]
gi|256719645|gb|EEU33200.1| gp27 [Fusobacterium sp. 3_1_36A2]
Length = 161
Score = 89.3 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 17/154 (11%)
Query: 16 IAVANF-FIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+ VA + F + ID +K+Q+ +Y + + + K + +EE + WK GP+ GV
Sbjct: 5 LNVAEYIFKEYYRVTGELIDEMKLQKLLYFSQRETLAILNKPLFNEEFEGWKYGPISRGV 64
Query: 75 YHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKT 134
F + D+ E I+ +I +Y S ++ +L +I +E
Sbjct: 65 RTVFTKDGIN--TDTEDIK---------SESKYIINNIILEYGSLASWKLSKISHKEVS- 112
Query: 135 WRRLYDP--NDPNTNRTITVEEITKMADGSNISP 166
W + N NR I +E+I + D + P
Sbjct: 113 WLNSRKDLKDGENGNRKIKLEDIKE--DAKKVKP 144
>gi|229180813|ref|ZP_04308150.1| Prophage ps3 protein 01 [Bacillus cereus 172560W]
gi|228602650|gb|EEK60134.1| Prophage ps3 protein 01 [Bacillus cereus 172560W]
Length = 324
Score = 89.3 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR 77
VAN+ + K I L +Q+ +Y + + +++ + GPV+ ++++
Sbjct: 160 VANYLLYKND----DITPLALQKLLYYAQGFCKVFTGTYLFEDDCEVGSHGPVYRVIFNK 215
Query: 78 FKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRR 137
+K + +EV D + ++ Q EI++ + N +S + L++++ + W
Sbjct: 216 YKVYQYDNLEVNYDSTNQLT-----QIEKEILDCVINTLGCYSGKSLEKMI-LFDLPWEV 269
Query: 138 LY---DPNDPN 145
+ + NDP
Sbjct: 270 THVELEDNDPG 280
>gi|229193806|ref|ZP_04320736.1| Prophage ps3 protein 01 [Bacillus cereus ATCC 10876]
gi|228589649|gb|EEK47538.1| Prophage ps3 protein 01 [Bacillus cereus ATCC 10876]
Length = 324
Score = 89.3 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR 77
VAN+ + K I L +Q+ +Y + + +++ + GPV+ ++++
Sbjct: 160 VANYLLYKND----DITPLALQKLLYYAQGFCKVFTGTYLFEDDCEVGSHGPVYRVIFNK 215
Query: 78 FKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRR 137
+K + +EV D + ++ Q EI++ + N +S + L++++ + W
Sbjct: 216 YKVYQYDNLEVNYDSTNQLT-----QIEKEILDCVINTLGCYSGKSLEKMI-LFDLPWEV 269
Query: 138 LY---DPNDPN 145
+ + NDP
Sbjct: 270 THVELEDNDPG 280
>gi|206972784|ref|ZP_03233706.1| prophage ps3 protein 01, putative [Bacillus cereus AH1134]
gi|206731668|gb|EDZ48868.1| prophage ps3 protein 01, putative [Bacillus cereus AH1134]
Length = 334
Score = 89.3 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR 77
VAN+ + K I L +Q+ +Y + + +++ + GPV+ ++++
Sbjct: 170 VANYLLYKND----DITPLALQKLLYYAQGFCKVFTGTYLFEDDCEVGSHGPVYRVIFNK 225
Query: 78 FKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRR 137
+K + +EV D + ++ Q EI++ + N +S + L++++ + W
Sbjct: 226 YKVYQYDNLEVNYDSTNQLT-----QIEKEILDCVINTLGCYSGKSLEKMI-LFDLPWEV 279
Query: 138 LY---DPNDPN 145
+ + NDP
Sbjct: 280 THLELEDNDPG 290
>gi|38233395|ref|NP_939162.1| hypothetical protein DIP0796 [Corynebacterium diphtheriae NCTC
13129]
gi|38199655|emb|CAE49314.1| Putative phage protein [Corynebacterium diphtheriae]
Length = 188
Score = 88.9 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 46/126 (36%), Gaps = 6/126 (4%)
Query: 34 DHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLS 93
D +K+ + Y + + + + +EE QAWK G V + + + + ++
Sbjct: 19 DKMKLYKLCYFSQGWHLAWTGRPLFNEELQAWKYGAVSPTL-RQASGLRADD-DRLVTQI 76
Query: 94 FRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYD--PNDPNTNRTIT 151
+ +++++ + Y + L ++ W + P D + + I
Sbjct: 77 WSGDSSQLIDYERSVVDTVVSFYGDLESFHLSDLSH--GFAWSTVRGNLPPDASCSDVIP 134
Query: 152 VEEITK 157
I +
Sbjct: 135 HSLIRR 140
>gi|313472927|ref|ZP_07813415.1| toxin-antitoxin system, antitoxin component, Xre family
[Lactobacillus jensenii 1153]
gi|313448921|gb|EFR61245.1| toxin-antitoxin system, antitoxin component, Xre family
[Lactobacillus jensenii 1153]
Length = 151
Score = 88.9 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 51/137 (37%), Gaps = 9/137 (6%)
Query: 13 YSTIAVANFFIDK------GVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWK 66
Y + N+ + + + +K + +Y ++ M ++ AW+
Sbjct: 2 YDVFKIVNWLRVRNNADLQANPNAEELTQMKAMKLLYYIQAASLVVTGHRMFKDDIVAWR 61
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKI-ANQEIGEIMESIWNKYQSHSTEQLQ 125
GP V++++ + + + S + ++ ++ + +I+ SI++ Y S L
Sbjct: 62 YGPAVESVHNKY-IHQRGIVGYVDNQSLNDYRELQSDSQTADILNSIYDIYGHSSAYDLM 120
Query: 126 EIVQEENKTWRRLYDPN 142
E K W+
Sbjct: 121 RQTHSE-KPWKETKQSE 136
>gi|255316707|ref|ZP_05358290.1| phage-associated protein [Clostridium difficile QCD-76w55]
Length = 169
Score = 88.9 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 70/155 (45%), Gaps = 16/155 (10%)
Query: 13 YSTIAVANFFIDKGVKY-SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQ---AWKQG 68
Y + +AN+ + P +L++Q+ +YL + K+S+ +++ + AW G
Sbjct: 9 YDAVDIANYILWYCENKLKNPSTNLRLQKLLYLIQERYLYLYKESIFNDKFEWFEAWDYG 68
Query: 69 PVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIV 128
P ++ F FDS+PI I+ + + + ++E + +E + + STE + E +
Sbjct: 69 PTMPEIWFTFYEFDSNPITGIIPKNNDL---VKDKE-KDTIEEVIELTKDISTEDIIEYL 124
Query: 129 QEENKTWRRLYDPNDPNTNRTITVEEITKMADGSN 163
+ E +P +TI+ +I + N
Sbjct: 125 RLE--------EPEHFIGRQTISSFDIEYYIEKRN 151
>gi|238854550|ref|ZP_04644887.1| prophage ps3 protein 01 [Lactobacillus jensenii 269-3]
gi|282932368|ref|ZP_06337801.1| toxin-antitoxin system, antitoxin component, Xre family
[Lactobacillus jensenii 208-1]
gi|238832843|gb|EEQ25143.1| prophage ps3 protein 01 [Lactobacillus jensenii 269-3]
gi|281303525|gb|EFA95694.1| toxin-antitoxin system, antitoxin component, Xre family
[Lactobacillus jensenii 208-1]
Length = 158
Score = 88.9 bits (219), Expect = 9e-16, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 51/137 (37%), Gaps = 9/137 (6%)
Query: 13 YSTIAVANFFIDK------GVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWK 66
Y + N+ + + + +K + +Y ++ M ++ AW+
Sbjct: 2 YDVFKIVNWLRVRNNADLQANPNAEELTQMKAMKLLYYIQAASLVVTGHRMFKDDIVAWR 61
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKI-ANQEIGEIMESIWNKYQSHSTEQLQ 125
GP V++++ + + + S + ++ ++ + +I+ SI++ Y S L
Sbjct: 62 YGPAVESVHNKY-IHQRGIVGYVDNQSLNDYRELQSDSQTADILNSIYDIYGHSSAYDLM 120
Query: 126 EIVQEENKTWRRLYDPN 142
E K W+
Sbjct: 121 RQTHSE-KPWKETKQSE 136
>gi|238852887|ref|ZP_04643290.1| prophage ps3 protein 01 [Lactobacillus gasseri 202-4]
gi|282851964|ref|ZP_06261324.1| toxin-antitoxin system, antitoxin component, Xre domain protein
[Lactobacillus gasseri 224-1]
gi|238834479|gb|EEQ26713.1| prophage ps3 protein 01 [Lactobacillus gasseri 202-4]
gi|282556973|gb|EFB62575.1| toxin-antitoxin system, antitoxin component, Xre domain protein
[Lactobacillus gasseri 224-1]
Length = 158
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 50/137 (36%), Gaps = 9/137 (6%)
Query: 13 YSTIAVANFFIDK------GVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWK 66
Y + N+ + + + +K + +Y ++ M ++ AWK
Sbjct: 2 YDVFKIVNWLRVRNNADLQADPNAEELTQMKAMKLLYYIQAASLVVTGHRMFKDDIVAWK 61
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKI-ANQEIGEIMESIWNKYQSHSTEQLQ 125
GP V++++ + + + S + ++ ++ + +I+ SI++ Y S L
Sbjct: 62 YGPAVESVHNKY-IHQRGIVGYVDNQSLNDYRELQSDSQTADILNSIYDIYGHSSAYDLM 120
Query: 126 EIVQEENKTWRRLYDPN 142
E W+
Sbjct: 121 RQTHSER-PWKETKQSE 136
>gi|148380020|ref|YP_001254561.1| hypothetical protein CBO2063 [Clostridium botulinum A str. ATCC
3502]
gi|148289504|emb|CAL83602.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
3502]
Length = 89
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 41 FIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKI 100
+Y + + + + + +AW GPV+ +YH ++ + +PIE ++ + +I
Sbjct: 1 MLYNCQGFYKVFDGEYLFNNDCEAWAHGPVYKKIYHEYRNYGYNPIEENIEYNHIELTEI 60
Query: 101 ANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
EI+++I +S + L ++ E
Sbjct: 61 E----REIIDNIIINLGCYSGKILGKMTHSE 87
>gi|306836835|ref|ZP_07469793.1| hypothetical protein HMPREF0277_2050 [Corynebacterium accolens ATCC
49726]
gi|304567296|gb|EFM42903.1| hypothetical protein HMPREF0277_2050 [Corynebacterium accolens ATCC
49726]
Length = 201
Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 54/159 (33%), Gaps = 12/159 (7%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
V + ++ +D LK+ + Y + + + + E QAW+ GPV
Sbjct: 3 DIFDVGQYITERIPN----VDKLKLNKLCYFSQGWHLAWTGRPLFQAEFQAWRHGPVSSE 58
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
+ + + + E+++SI Y + +L ++
Sbjct: 59 LRAQTWQVAGTKEPWPVPYVPGGQSDNLSTYEREVVDSIIAFYGGVKSTKLSDLSH--GL 116
Query: 134 TWRRLYD--PNDPNTNR----TITVEEITKMADGSNISP 166
W P D +N T ++E ++ + N +P
Sbjct: 117 AWNEARRGIPKDQKSNEKLRTTTILQEFSQAINSHNPTP 155
>gi|242309858|ref|ZP_04809013.1| predicted protein [Helicobacter pullorum MIT 98-5489]
gi|239523859|gb|EEQ63725.1| predicted protein [Helicobacter pullorum MIT 98-5489]
Length = 134
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 66/148 (44%), Gaps = 17/148 (11%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+ + ++++ + VK + +L++Q+ +Y T + + K ++ ++ +AW+ GP+
Sbjct: 3 NALELSSYILKNSVKG---LSNLELQKILYFTELAYIKKFNKHLIIDDFEAWQYGPIIRS 59
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
VY+ ++ + ++ I+ D S + +E E+++S + S S +L E
Sbjct: 60 VYYEYRNYGANSIDKPEDES---LSRQLTKEELEVIDSTIIECNSKSYWELVEKS----- 111
Query: 134 TWRRLYDPNDPNTNRTITVEEITKMADG 161
+ I + I K A G
Sbjct: 112 ------NSFKGGKKEVINKDLIRKEAKG 133
>gi|227530350|ref|ZP_03960399.1| phage associated protein [Lactobacillus vaginalis ATCC 49540]
gi|227349730|gb|EEJ40021.1| phage associated protein [Lactobacillus vaginalis ATCC 49540]
Length = 307
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 17/140 (12%), Positives = 55/140 (39%), Gaps = 7/140 (5%)
Query: 10 NPPYSTIAVANFF-IDKGVKYS-----IPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQ 63
P ++ + +AN+ ++ + P+ +K+ + +Y+ + + + +
Sbjct: 151 KPKFTAVQLANWLRVENYFERDSDLNIDPLTQMKVIKLLYIAYGRFLAATRNKLFSSTIV 210
Query: 64 AWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIA-NQEIGEIMESIWNKYQSHSTE 122
++ GP+ V+ +F I+ + + ++ + EI +++ + Y +++
Sbjct: 211 HFQYGPLITEVHDKFNGQSVLDIDKPDKEAMDDYNLVSQDGEIVDLLSKVNEDYINYNAA 270
Query: 123 QLQEIVQEENKTWRRLYDPN 142
+L + W D
Sbjct: 271 RLSKQTHRPGSPWDLTPDRE 290
>gi|298252748|ref|ZP_06976542.1| uncharacterized phage-associated protein [Gardnerella vaginalis
5-1]
gi|297533112|gb|EFH71996.1| uncharacterized phage-associated protein [Gardnerella vaginalis
5-1]
Length = 149
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
Query: 32 PIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFK-YFDSHPIEVIM 90
P+ +K+Q+ +Y + + S+ E+ +AW GPV + +++R + F E+++
Sbjct: 16 PMTTMKLQKLVYYSQAHSLATTGLSLFPEDFEAWTNGPVSLELFNRHRGRFTIRKEELLI 75
Query: 91 DLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTW--RRLYDPNDPNTNR 148
L R E +I+E + K + + QL E +E+ W R+ + +
Sbjct: 76 SLPERCA--TLEYEQVKIIEEVCAKLGNLTGNQLSERTHKED-PWIRARIGISANQGSEE 132
Query: 149 TITVEEI 155
I+ + +
Sbjct: 133 IISKKSM 139
>gi|283783313|ref|YP_003374067.1| toxin-antitoxin system, antitoxin component, Xre domain protein
[Gardnerella vaginalis 409-05]
gi|283442082|gb|ADB14548.1| toxin-antitoxin system, antitoxin component, Xre domain protein
[Gardnerella vaginalis 409-05]
Length = 149
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
Query: 32 PIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFK-YFDSHPIEVIM 90
P+ +K+Q+ +Y + + S+ E+ +AW GPV + +++R + F E+++
Sbjct: 16 PMTTMKLQKLVYYSQAHSLATTGLSLFPEDFEAWTNGPVSLELFNRHRGRFTIRKEELLI 75
Query: 91 DLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTW--RRLYDPNDPNTNR 148
L R E +I+E + K + + QL E +E+ W R+ + +
Sbjct: 76 SLPERCA--TLEYEQVKIIEEVCAKLGNLTGNQLSERTHKED-PWIRARIGISANQGSEE 132
Query: 149 TITVEEI 155
I+ + +
Sbjct: 133 IISKKSM 139
>gi|153931194|ref|YP_001384318.1| hypothetical protein CLB_2002 [Clostridium botulinum A str. ATCC
19397]
gi|153936660|ref|YP_001387855.1| hypothetical protein CLC_2007 [Clostridium botulinum A str. Hall]
gi|152927238|gb|ABS32738.1| hypothetical protein CLB_2002 [Clostridium botulinum A str. ATCC
19397]
gi|152932574|gb|ABS38073.1| hypothetical protein CLC_2007 [Clostridium botulinum A str. Hall]
Length = 88
Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 42 IYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIA 101
+Y + + + + + +AW GPV+ +YH ++ + +PIE ++ + +I
Sbjct: 1 MYNCQGFYKVFDGEYLFNNDCEAWAHGPVYKKIYHEYRNYGYNPIEENIEYNHIELTEIE 60
Query: 102 NQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
EI+++I +S + L ++ E
Sbjct: 61 ----REIIDNIIINLGCYSGKILGKMTHSE 86
>gi|71275398|ref|ZP_00651684.1| conserved hypothetical protein [Xylella fastidiosa Dixon]
gi|71898570|ref|ZP_00680741.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
gi|170730373|ref|YP_001775806.1| hypothetical protein Xfasm12_1233 [Xylella fastidiosa M12]
gi|71163698|gb|EAO13414.1| conserved hypothetical protein [Xylella fastidiosa Dixon]
gi|71731694|gb|EAO33754.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
gi|167965166|gb|ACA12176.1| conserved hypothetical protein [Xylella fastidiosa M12]
Length = 127
Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 58 LDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIA--NQEIGEIMESIWNK 115
+DE +AW+ GPV +Y+ K + S I + + + + + + + I+ S+W
Sbjct: 1 MDEPVEAWRAGPVIHSLYNAIKQYGSSGITERLPVRWFSWGRASKLDVTAAAILASVWAT 60
Query: 116 YQSHSTEQLQEIVQEENKTWRRLYD 140
Y+ + +L I + E W +
Sbjct: 61 YRRYGGVELAAITRAEGSPWWTTWK 85
>gi|297243457|ref|ZP_06927389.1| hypothetical protein GVAMD_0365 [Gardnerella vaginalis AMD]
gi|296888502|gb|EFH27242.1| hypothetical protein GVAMD_0365 [Gardnerella vaginalis AMD]
Length = 149
Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
Query: 32 PIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFK-YFDSHPIEVIM 90
P+ +K+Q+ +Y + + S+ E+ +AW GPV + +++R + F E+++
Sbjct: 16 PMTTMKLQKLVYYSQAHSLATTGLSLFPEDFEAWTNGPVSLELFNRHRGRFTIRKEELLI 75
Query: 91 DLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTW--RRLYDPNDPNTNR 148
L R E +I++ + K + + QL E +E+ W R+ + +
Sbjct: 76 SLPERCA--TLEYEQVKIIKEVCAKLGNLTGNQLSERTHKED-PWIRARIGISANQGSEE 132
Query: 149 TITVEEI 155
I+ + +
Sbjct: 133 IISKKSM 139
>gi|331271033|ref|YP_004385744.1| hypothetical protein CbC4_4169 [Clostridium botulinum BKT015925]
gi|329127425|gb|AEB77369.1| conserved hypothetical protein [Clostridium botulinum BKT015925]
Length = 222
Score = 86.6 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 54/136 (39%), Gaps = 7/136 (5%)
Query: 14 STIAVANFFIDKGVKYSIPID-HLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
I VA +FI G K + ++K+ + +Y ++++ K + ++ A+K G V
Sbjct: 3 QAIDVAKWFIKNGYKPCDTRNGNMKLNKLLYFAQLISLVKRDKVLFNDNLSAFKHGVVVE 62
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
V + ++ I+ + R E E++ N + +L ++ E+
Sbjct: 63 NVRQEYHNNYNNFIQ-----TARKSSITLADEEEEVLNITSNIFGQVDARELSQLTH-EH 116
Query: 133 KTWRRLYDPNDPNTNR 148
W+ Y+ +
Sbjct: 117 SCWKDHYEKSKRGNGN 132
>gi|282851961|ref|ZP_06261321.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
gi|282556970|gb|EFB62572.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
Length = 103
Score = 85.9 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 57 MLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKY 116
M D+ +AW GPV + +Y + + I+ D+ + +++ ++E +W+ Y
Sbjct: 1 MFDDHFEAWVHGPVILRLYAEYADYGFGSIDEKPDV------PVFTEDVENVLEQVWDIY 54
Query: 117 QSHSTEQLQEIVQEENKTW---RRLYDPNDPNTNRTITVEEI 155
+S +L+ + +E+ W R+ P N TI+ ++I
Sbjct: 55 GKYSANELESMTHQED-PWINARKGLSPLQKGKN-TISDKDI 94
>gi|168187142|ref|ZP_02621777.1| conserved hypothetical protein [Clostridium botulinum C str.
Eklund]
gi|169294975|gb|EDS77108.1| conserved hypothetical protein [Clostridium botulinum C str.
Eklund]
Length = 222
Score = 85.9 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 54/136 (39%), Gaps = 7/136 (5%)
Query: 14 STIAVANFFIDKGVKYSIPID-HLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
I VA +FI G + + ++K+ + +Y ++++ + + ++ A+K G V
Sbjct: 3 QAIDVAKWFIKNGYEPCDTRNGNMKLNKLLYFAQLISLVKRDRVLFNDNLSAFKHGVVVE 62
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
V + ++ I+ + R E E++ N + +L ++ E+
Sbjct: 63 NVRQEYHNNYNNFIQ-----TARKSSITLADEEEEVLNITSNIFGQVDARELSQLTH-EH 116
Query: 133 KTWRRLYDPNDPNTNR 148
W+ Y+ +
Sbjct: 117 SCWKDHYEKSKRGNGN 132
>gi|228924680|ref|ZP_04087866.1| Prophage ps3 protein 01 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228834979|gb|EEM80432.1| Prophage ps3 protein 01 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 324
Score = 85.9 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 55/131 (41%), Gaps = 13/131 (9%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR 77
VAN+ + K I L +Q+ +Y + + +++ + GPV+ ++++
Sbjct: 160 VANYLLYKND----DITPLALQKLLYYAQGFCKVFTGTYLFEDDCEVGSHGPVYRVIFNK 215
Query: 78 FKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRR 137
+K + +EV + Q EI++ + N +S + L++++ + W
Sbjct: 216 YKVYQYDNLEVSY-----VSTNQLTQIEKEILDCVMNTLGCYSGKSLEKMI-LFDLPWEV 269
Query: 138 LY---DPNDPN 145
+ + N P
Sbjct: 270 AHLELEDNGPG 280
>gi|229073386|ref|ZP_04206522.1| Prophage ps3 protein 01 [Bacillus cereus F65185]
gi|228709693|gb|EEL61731.1| Prophage ps3 protein 01 [Bacillus cereus F65185]
Length = 321
Score = 85.5 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR 77
VAN+ + K I L +Q+ +Y + + +++ + GPV+ ++++
Sbjct: 160 VANYLLYKND----DITPLALQKLLYYAQGFCKVFTGTYLFEDDCEVGSHGPVYRVIFNK 215
Query: 78 FKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRR 137
+K + +EV + Q EI++ + N +S + L++++ + W
Sbjct: 216 YKVYQYDNLEVNY-----VSTNQLTQIEKEILDCVINTLGCYSGKSLEKMI-LFDLPWTV 269
Query: 138 L-YDPNDPNTNRTITVEE 154
+ D N+++ I +E
Sbjct: 270 ADLELEDNNSDKPIMEKE 287
>gi|253682866|ref|ZP_04863657.1| conserved hypothetical protein [Clostridium phage D-1873]
gi|253560940|gb|EES90398.1| conserved hypothetical protein [Clostridium phage D-1873]
Length = 225
Score = 85.5 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 54/136 (39%), Gaps = 7/136 (5%)
Query: 14 STIAVANFFIDKGVKYSIPID-HLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
I VA +FI + + ++K+ + +Y ++++ K + ++ A+K G V
Sbjct: 3 QAIDVAKWFIKNNYEPCDTKNGNMKLNKLLYFAQLISLVKRDKVLFNDNLSAFKHGVVVE 62
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
V + + I+ S ++E E++ N + + +L ++ E+
Sbjct: 63 NVRKEYYNNYHNFIQTAQKSSI-----TLSEEEEEVLNITINIFGQVNARELSQLTH-EH 116
Query: 133 KTWRRLYDPNDPNTNR 148
W+ Y+ +
Sbjct: 117 SCWKDHYEKSKRGNGN 132
>gi|254780025|ref|YP_003058132.1| hypothetical protein HELPY_1490 [Helicobacter pylori B38]
gi|254001938|emb|CAX30193.1| Conserved hypothetical protein [Helicobacter pylori B38]
Length = 118
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 54/122 (44%), Gaps = 6/122 (4%)
Query: 42 IYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIA 101
+Y T D + + K ++ ++ +AWK GPV VY++++ + ++PI+ + + +
Sbjct: 1 MYFTELDYIKKFDKHLVSDDFEAWKYGPVAREVYYKYRNYGANPIDKPKEETLSQNLRKD 60
Query: 102 NQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKMADG 161
E + K S L + +EN W + + + I+ + I + A
Sbjct: 61 ELET---INRSIEKCSKKSYWDLVKESHKENGAWHKSFKEDRK---EIISKDLIRQEAKQ 114
Query: 162 SN 163
+N
Sbjct: 115 TN 116
>gi|254453001|ref|ZP_05066438.1| hypothetical protein OA238_3618 [Octadecabacter antarcticus 238]
gi|198267407|gb|EDY91677.1| hypothetical protein OA238_3618 [Octadecabacter antarcticus 238]
Length = 86
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 57 MLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQE---IGEIMESIW 113
M E P+ WK GPVF +YH FK F PI + P+ +Q+ ++ IW
Sbjct: 1 MTTEGPEIWKHGPVFDSLYHAFKVFGRKPITAPQSSNPFAAPENVDQDDENTRNLVTWIW 60
Query: 114 NKYQSHSTEQLQEIVQEENK 133
+Y S L ++ ++
Sbjct: 61 GRYGHLSGFALSDLTHKDGT 80
>gi|161506780|ref|YP_001576734.1| Phage associated protein [Lactobacillus helveticus DPC 4571]
gi|160347769|gb|ABX26443.1| Phage associated protein [Lactobacillus helveticus DPC 4571]
Length = 244
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 53/137 (38%), Gaps = 7/137 (5%)
Query: 5 TFTQTNPPYSTIAVANFF-IDKGVKYSI-----PIDHLKIQQFIYLTHCDVVLQKKKSML 58
+ P + + +AN+F ++ PI +++ + +Y + +++ KK +
Sbjct: 108 GISSEQPKFKAVQLANWFRVNNYFARQFDYNVDPITQMQVVKLLYFAYGRFLVKSKKRLF 167
Query: 59 DEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKI-ANQEIGEIMESIWNKYQ 117
+ PV V+ +F+ + +F + + ++ EI +++ I Y
Sbjct: 168 SSPILHLQYRPVVEEVHQQFRGMVVLDPDKPDKQAFEDYNLVSSDAEINNLLQKIDEDYS 227
Query: 118 SHSTEQLQEIVQEENKT 134
++ L I+
Sbjct: 228 DYTASGLSRIIHRAGSP 244
>gi|71276650|ref|ZP_00652922.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71900060|ref|ZP_00682204.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|170730096|ref|YP_001775529.1| hypothetical protein Xfasm12_0920 [Xylella fastidiosa M12]
gi|71162577|gb|EAO12307.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71730203|gb|EAO32290.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|167964889|gb|ACA11899.1| conserved hypothetical protein [Xylella fastidiosa M12]
Length = 83
Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 36/76 (47%)
Query: 33 IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDL 92
+ L++ + +YL H + + ++DE +AW+ GPV +Y+ K S I + +
Sbjct: 2 LTPLQVLKLVYLAHGWCLGVHTQPLIDESVEAWRAGPVIRPLYNVIKQDGSSGITERLPV 61
Query: 93 SFRIFPKIANQEIGEI 108
+ + + ++ +
Sbjct: 62 RWFSCGRASKIDVTTV 77
>gi|259503003|ref|ZP_05745905.1| xre family toxin-antitoxin system [Lactobacillus antri DSM 16041]
gi|259169041|gb|EEW53536.1| xre family toxin-antitoxin system [Lactobacillus antri DSM 16041]
Length = 307
Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 17/139 (12%), Positives = 56/139 (40%), Gaps = 7/139 (5%)
Query: 11 PPYSTIAVANFF-IDKGVKYS-----IPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQA 64
P ++ + +AN+ ++ + P+ +K+ + +Y+ + ++ + +
Sbjct: 152 PKFTAVQLANWLRVENYFERDSNLNIDPLTQMKVIKLLYIAYGRFLVATRNKLFSSTIVH 211
Query: 65 WKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIA-NQEIGEIMESIWNKYQSHSTEQ 123
++ GP+ V+ +F I+ + + ++ + EI +++ + Y +++ +
Sbjct: 212 FQYGPLVTEVHDKFNGQTVLDIDKPDKEAMDDYSLVSQDSEIVDLLSKVNEDYINYNAAR 271
Query: 124 LQEIVQEENKTWRRLYDPN 142
L + W D
Sbjct: 272 LSKQTHRAGSPWDLTPDRE 290
>gi|227489142|ref|ZP_03919458.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227540705|ref|ZP_03970754.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227090886|gb|EEI26198.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227183517|gb|EEI64489.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51866]
Length = 190
Score = 83.2 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 15/124 (12%)
Query: 33 IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDL 92
+D +K+ + Y + + + E+ QAW GPV V + + + PI +
Sbjct: 18 VDKMKLYKLCYFAQGWNLAWTGRRLFPEDFQAWTYGPVPVELRNC-----TDPIANGNTI 72
Query: 93 SFRIFPKIANQEI----GEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYD--PNDPNT 146
F P+ + E+ +ESI + Y + QL WR PN+ +
Sbjct: 73 PF--VPRGDSSELTVAEKRTIESIVDFYGKSRSFQLSFESH--GLAWREARGGLPNESRS 128
Query: 147 NRTI 150
+ +
Sbjct: 129 SDVL 132
>gi|322383488|ref|ZP_08057264.1| hypothetical protein PL1_3350 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321152227|gb|EFX45057.1| hypothetical protein PL1_3350 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 109
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Query: 57 MLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKY 116
M D+E +AW GPV +Y +K F PI+ + I + +++ +W +Y
Sbjct: 1 MFDDEFEAWVHGPVNYKLYLDYKKFGWSPIKENTEG--FQEDSIFDDNQLHVLDQVWERY 58
Query: 117 QSHSTEQLQEIVQEENKTWRRLY--DPNDPNTNRTITVEEITKMADG 161
+ L+ + E+ W++ NDP + I +++ G
Sbjct: 59 GRLDVKVLEALTHGED-PWKKARMLLENDPYSPAIIVKDDMMSFYRG 104
>gi|148284307|ref|YP_001248397.1| hypothetical protein OTBS_0523 [Orientia tsutsugamushi str.
Boryong]
gi|146739746|emb|CAM79589.1| hypothetical protein OTBS_0523 [Orientia tsutsugamushi str.
Boryong]
Length = 90
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 42 IYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIA 101
+Y + + K + E+ +AW+ GPV + F F+++ I ++ F I+
Sbjct: 1 MYFSQGVHLALFDKPLFKEDIEAWQNGPVVRHLRSIFGSFEANAIPGPGEIDFSIY---- 56
Query: 102 NQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
+ E++ I++ Y H+ L+++
Sbjct: 57 TNQQKELIYKIYSSYGEHTASYLRDLTH 84
>gi|116514086|ref|YP_812992.1| phage-associated protein [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|116514101|ref|YP_813007.1| phage-associated protein [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|116093401|gb|ABJ58554.1| Uncharacterized phage-associated protein [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|116093416|gb|ABJ58569.1| Uncharacterized phage-associated protein [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
Length = 137
Score = 82.4 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 41/111 (36%), Gaps = 1/111 (0%)
Query: 27 VKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPI 86
+ P+ +K+ + +Y + +++ + + PV V+ +FK
Sbjct: 4 DENVEPLTQMKLIKLLYFAYGRYLVKTHNKLFTSSIVHSQYDPVITEVHSKFKGLTVLDT 63
Query: 87 EVIMDLSFRIFPKIA-NQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWR 136
+F + ++ + +I ++ + Y ++S L + + W
Sbjct: 64 GKPSKEAFDDYNLVSKDGDISHLLRLVNEAYINYSASGLSQKTHQPGSPWS 114
>gi|71898043|ref|ZP_00680248.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71732287|gb|EAO34342.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 83
Score = 82.4 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 33/69 (47%)
Query: 33 IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDL 92
+ L++ + +YL H + + ++DE +AW+ GP+ +Y+ K S I + +
Sbjct: 2 LTPLQVLKLVYLAHGWCLGVHTQPLIDEPVEAWRAGPLIRSLYNVIKQDGSSGITEWLPV 61
Query: 93 SFRIFPKIA 101
+ + +
Sbjct: 62 RWFSCARAS 70
>gi|219882668|ref|YP_002477832.1| Uncharacterized phage-associated protein [Arthrobacter
chlorophenolicus A6]
gi|219861674|gb|ACL42015.1| Uncharacterized phage-associated protein [Arthrobacter
chlorophenolicus A6]
Length = 164
Score = 82.4 bits (202), Expect = 8e-14, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 58/151 (38%), Gaps = 13/151 (8%)
Query: 9 TNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQG 68
+ PP + +A + + + + + + Y ++ + + + D + AW G
Sbjct: 6 SGPPATIFDLAAAILARTGET----TTVALHRLAYYCQAWHLVWEDRLLADADFYAWGTG 61
Query: 69 PVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIV 128
PV ++ + + I + P + ++ E ++S+ Y S +L IV
Sbjct: 62 PVNPDLHSS--HAGTFTISEVPGN-----PGVFTEDENESIDSVVKAYGSLQPFELSSIV 114
Query: 129 QEENKTWRRLYDPNDPNTN-RTITVEEITKM 158
+ E+ WR + P R I V+ +
Sbjct: 115 KNED-PWRSAWSGTQPGKRGRLIQVDRMQSF 144
>gi|182418783|ref|ZP_02950051.1| conserved hypothetical protein [Clostridium butyricum 5521]
gi|237668818|ref|ZP_04528802.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182377382|gb|EDT74941.1| conserved hypothetical protein [Clostridium butyricum 5521]
gi|237657166|gb|EEP54722.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 337
Score = 82.4 bits (202), Expect = 8e-14, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 48/114 (42%), Gaps = 4/114 (3%)
Query: 22 FIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYF 81
I + + L IQ+ IY + + + +E+ +A +GP+ VY R+K +
Sbjct: 168 VIKYILTRGDDVTLLMIQKLIYYVQAFYYVFTEHFLFEEDFKAGYRGPLLESVYERYKVY 227
Query: 82 DSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTW 135
I + + + + I+E + Y +S + L+++V+ E W
Sbjct: 228 GFEDINNEILNNEEVNLE---DIEKNIVEGVLKFYGCYSGKILEKMVENE-APW 277
>gi|227487578|ref|ZP_03917894.1| possible prophage protein [Corynebacterium glucuronolyticum ATCC
51867]
gi|227092396|gb|EEI27708.1| possible prophage protein [Corynebacterium glucuronolyticum ATCC
51867]
Length = 196
Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 46/137 (33%), Gaps = 12/137 (8%)
Query: 14 STIAVANFF---IDKGVKYSIP--IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQG 68
S VA+F + + P I +LK Q+ YL + ++ D QAW G
Sbjct: 2 SDRTVADFIEWAVRRERDEGRPPSISNLKAQELAYLAESLYGYRSGDNLADTSFQAWNHG 61
Query: 69 PVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIV 128
PV +Y K P+ I P ++ I E +W+ + + L+
Sbjct: 62 PVLPSLYSALKGNGKEPL-SPHTERLTIGP-----DLETIYEIVWDDFGDMTASNLRNFT 115
Query: 129 QEENKTWRRLYDPNDPN 145
+ Y
Sbjct: 116 HRIG-PYSSYYTEGRRG 131
>gi|70726748|ref|YP_253662.1| hypothetical protein SH1747 [Staphylococcus haemolyticus JCSC1435]
gi|68447472|dbj|BAE05056.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 177
Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 18/154 (11%)
Query: 12 PYSTIAVANFFIDKGVK---YSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQG 68
P + +A I K + SI D +K+Q+ +Y + +++DEE + W G
Sbjct: 7 PDKSHVIAQNLISKYQEITGNSIVGDEMKVQKLMYYIQKTSIALTGDTIIDEEFEGWVHG 66
Query: 69 PVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIV 128
PV + F YF I KI + E I+E+ +Y ++T L+E
Sbjct: 67 PVLPSLRGLFDYFVED-ITSK--------NKIDDTE-EFIIENAIYQYGKYATWALREKS 116
Query: 129 QEENKTW---RRLYDPNDPNTNRTITVEEITKMA 159
E W R+ N+ N+ +++E+I + A
Sbjct: 117 HNEIS-WINSRKGLSSNERGHNK-LSIEDIKEDA 148
>gi|255316708|ref|ZP_05358291.1| Uncharacterized phage-associated protein [Clostridium difficile
QCD-76w55]
Length = 156
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 49/132 (37%), Gaps = 19/132 (14%)
Query: 11 PPYSTIAVANFFIDKGVKY-SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGP 69
P Y + VA + + PI++ K+Q+ +Y + + K + D AW G
Sbjct: 11 PNYDAMDVAEYILWYCENKLKNPINNSKLQRILYFIQKKYICKFNKLLFDNYMVAWSYGI 70
Query: 70 VFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQ-------------EIGEIM-----ES 111
VF VY+ + + I I+ + + ++ +++ +
Sbjct: 71 VFPEVYYSYNNYGVEDITGILPCRYFEISTKDDSKFINEMVASLVYRDVEDLIKETQEDE 130
Query: 112 IWNKYQSHSTEQ 123
+W Y H ++
Sbjct: 131 VWKAYCGHKEKE 142
>gi|325686115|gb|EGD28166.1| phage-associated protein [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 137
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 41/111 (36%), Gaps = 1/111 (0%)
Query: 27 VKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPI 86
+ P+ +K+ + +Y + +++ + + PV V+ +FK
Sbjct: 4 DENVEPLTQIKLIKLLYFAYGRYLVKTHNKLFTSSIVHSQYDPVITEVHSKFKGLTVLDT 63
Query: 87 EVIMDLSFRIFPKIA-NQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWR 136
+F + ++ + +I ++ + Y ++S L + + W
Sbjct: 64 GKPSKEAFDDYNLVSKDSDISHLLRLVNEAYINYSASGLSQKTHQPGSPWS 114
>gi|225386399|ref|ZP_03756163.1| hypothetical protein CLOSTASPAR_00144 [Clostridium asparagiforme
DSM 15981]
gi|225047480|gb|EEG57726.1| hypothetical protein CLOSTASPAR_00144 [Clostridium asparagiforme
DSM 15981]
Length = 81
Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 6/86 (6%)
Query: 38 IQQFIYLTHCDVVLQK-KKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRI 96
+Q+ Y + +E QAW GPV +Y + + I
Sbjct: 1 MQKLCYYAQAWYCALYDGSPLFSDEIQAWVHGPVIPSIYPVYAGYKWSTI-----PKADF 55
Query: 97 FPKIANQEIGEIMESIWNKYQSHSTE 122
++++ +++++++N Y S
Sbjct: 56 DASALDEKLTDVLDAVYNTYGELSGG 81
>gi|297571057|ref|YP_003696831.1| phage-associated protein [Arcanobacterium haemolyticum DSM 20595]
gi|296931404|gb|ADH92212.1| Uncharacterized phage-associated protein [Arcanobacterium
haemolyticum DSM 20595]
Length = 140
Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Query: 14 STIAVANFFIDK-GVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+VAN+ + + + +K+ + +YL + ++D + +A++ GPV
Sbjct: 12 DPASVANYILHLDTQREDSDVTQMKLHKLLYLAQAHYLAVTGYRLMDSDVEAFEHGPVIK 71
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIA 101
V+ F+ + I L PK++
Sbjct: 72 AVFPMFREYGREVIVNHRPLCLVTCPKMS 100
>gi|197294372|ref|YP_001798913.1| phage-associated protein [Candidatus Phytoplasma australiense]
gi|171853699|emb|CAM11587.1| Uncharacterized phage-associated protein [Candidatus Phytoplasma
australiense]
Length = 162
Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 56/155 (36%), Gaps = 18/155 (11%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKK----------KSMLDEEPQ 63
+ V ++ + + +I +L + + +Y ++ ++ + ++ Q
Sbjct: 8 NVFDVVHYMV---FEKNIKASNLTLNKLVYYSYAKYLIDNNTLADIQNNNYQKLIPNYCQ 64
Query: 64 AWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQ 123
AW GPVF +Y K + I I +I ++ +E NKY +
Sbjct: 65 AWVYGPVFYELYRGIKQYLKRQIVNIP----KITGFPLTEKQKSAIEYATNKYGNWHPWD 120
Query: 124 LQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKM 158
L E+ W++ D R IT E I
Sbjct: 121 LVAKTHMED-PWKKNIDLTMAYPKRIITDESIFNF 154
>gi|197294208|ref|YP_001798749.1| phage-associated protein [Candidatus Phytoplasma australiense]
gi|171853535|emb|CAM11393.1| Uncharacterized phage-associated protein [Candidatus Phytoplasma
australiense]
Length = 163
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Query: 16 IAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVY 75
A+AN+ I ++ ++H K+Q+ +Y H ++ K+S+ + +AW++GP+F ++
Sbjct: 14 FALANYLIQ-----NMEVNHWKLQKLLYYAHAKHLVDFKESLAAAQVEAWEKGPIFRTLF 68
Query: 76 HRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQL 124
+ K DS I + + + + N +++ + KY +++L
Sbjct: 69 DKLKDHDSKEI-ITNPIPCSMRGQQLNASRLQVLNFVMEKYGWVDSKEL 116
>gi|242371749|ref|ZP_04817323.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W1]
gi|242350535|gb|EES42136.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W1]
Length = 174
Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 57/170 (33%), Gaps = 24/170 (14%)
Query: 6 FTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKK----------- 54
F Y T V N I + I L++Q+ +Y
Sbjct: 4 FIMAEQKYLTT-VEN-IIGLMKEEIKNISPLRLQKTLYFLFAYYGASYGQLSKSKEYEVT 61
Query: 55 --------KSMLDEEPQAWKQGPVFVGVYHRFKY-FDSHPIEVIMDLSFRIFPKIANQEI 105
+ + D + +AW+ GPV VY KY + I+ M +F I K QEI
Sbjct: 62 KSESLNLPEYLFDAQFEAWQYGPVIRDVYKNNKYSLGYNDIDFSM-SNFEIEDKTMQQEI 120
Query: 106 GEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEI 155
E + I S L E E++ W+ + N I E I
Sbjct: 121 TEYLREIIKSTLKISDFGLVERSH-EDEEWKNKITQQEIMNNDLIIKEYI 169
>gi|282917362|ref|ZP_06325117.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
D139]
gi|282318989|gb|EFB49344.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
D139]
Length = 169
Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 53/154 (34%), Gaps = 22/154 (14%)
Query: 22 FIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKK-------------------KSMLDEEP 62
I + I L++Q+ +Y + + D +
Sbjct: 13 IIGLMKEEIKNISPLRLQKTLYFLFAYYGASYGQLSKSKEYEVTKSESLNLPEYLFDAQF 72
Query: 63 QAWKQGPVFVGVYHRFKY-FDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHST 121
+AW+ GPV VY KY F + IE M +F I K QEI E + I S
Sbjct: 73 EAWQYGPVIRDVYKNNKYSFGYNDIEFSM-SNFEIEDKTMQQEITEYLREIIKSTLKISD 131
Query: 122 EQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEI 155
L E E++ W+ + N I E I
Sbjct: 132 FGLVERSH-EDEEWKNKITQQEIMNNDLIIKEYI 164
>gi|188518457|ref|ZP_03003944.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 11
str. ATCC 33695]
gi|188998211|gb|EDU67308.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 11
str. ATCC 33695]
Length = 84
Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 12/85 (14%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKS-------MLDEEPQAWK 66
+ + VAN+F+ K + K+Q+ +Y + + + + DE+ +AW
Sbjct: 5 TPLIVANWFLTK-----ESMTLKKVQKLVYYAYSWYLTLMNEKVDDLKNKLFDEKIKAWV 59
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIMD 91
GP +Y+ FK + + I I D
Sbjct: 60 HGPAIPMLYNEFKEYKYNSIPKIND 84
>gi|228918418|ref|ZP_04081866.1| Prophage ps3 protein 01 [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228949957|ref|ZP_04112149.1| Prophage ps3 protein 01 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228809701|gb|EEM56130.1| Prophage ps3 protein 01 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228841223|gb|EEM86417.1| Prophage ps3 protein 01 [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 321
Score = 78.9 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 54/121 (44%), Gaps = 10/121 (8%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR 77
VAN+ + K + L +Q+ +Y + + +++ + QGPV+ ++ +
Sbjct: 160 VANYLLYKND----DVTPLALQRLLYYAQGFCKVFTGTYLFEDDCEVGSQGPVYRVIFDK 215
Query: 78 FKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRR 137
+K + +EV D + ++ Q ++++ + N +S + L++++ + W
Sbjct: 216 YKGYQYDNLEVNHDSTNQLT-----QIEKQLLDCVVNTLGCYSGKTLKKMI-LFDLPWAV 269
Query: 138 L 138
Sbjct: 270 T 270
>gi|227509039|ref|ZP_03939088.1| possible phage-associated protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227191516|gb|EEI71583.1| possible phage-associated protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 156
Score = 78.9 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 11/126 (8%)
Query: 21 FFI------DKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+FI + + + +K+ +Y + + + AWK GP V
Sbjct: 10 WFIIVNMDKQRQYPGTEKLTQMKLMFLLYYVQGTFLALYGQKAFSNDVVAWKYGPAIAVV 69
Query: 75 YHRF--KYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+ RF K F + + D+++R + + +I+ + + + + +L E
Sbjct: 70 HQRFRGKRFVTGTVTNEDDVNYRDVN--QDDRLLKIVFEVQETFGNKTAAELSRQTMRER 127
Query: 133 KTWRRL 138
W+
Sbjct: 128 -PWKVT 132
>gi|296876013|ref|ZP_06900071.1| hypothetical protein HMPREF0833_0629 [Streptococcus parasanguinis
ATCC 15912]
gi|296433004|gb|EFH18793.1| hypothetical protein HMPREF0833_0629 [Streptococcus parasanguinis
ATCC 15912]
Length = 139
Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 16/119 (13%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDV----VLQKKK--SMLDEEPQAWKQGPVF 71
+AN I I +L++Q+ +Y D ++ + + DE W GPV
Sbjct: 6 LANHIIAVAQDNKTSISNLQLQKIMYFAMKDAKEKQLMSMDELSELYDEPFLVWAYGPVV 65
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
Y RFK F S PI + + + + +Y S + L +
Sbjct: 66 KSQYDRFKRFGSSPIIGLF----------QASDDLKKINGTIKEYLSETVSSLVRKSHQ 114
>gi|28198677|ref|NP_778991.1| hypothetical protein PD0772 [Xylella fastidiosa Temecula1]
gi|28056768|gb|AAO28640.1| phage-related protein [Xylella fastidiosa Temecula1]
gi|307579815|gb|ADN63784.1| hypothetical protein XFLM_09485 [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 83
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 34/69 (49%)
Query: 33 IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDL 92
+ L++ + +YL H + + ++DE +AW+ GP+ +Y+ K+ S I + +
Sbjct: 2 LTPLQVLKLVYLAHGWCLGVHTQPLIDELVEAWRAGPLIRSLYNVIKHDRSSGITEWLPV 61
Query: 93 SFRIFPKIA 101
+ + +
Sbjct: 62 RWFSCGRAS 70
>gi|224543170|ref|ZP_03683709.1| hypothetical protein CATMIT_02370 [Catenibacterium mitsuokai DSM
15897]
gi|224523957|gb|EEF93062.1| hypothetical protein CATMIT_02370 [Catenibacterium mitsuokai DSM
15897]
Length = 240
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 49/125 (39%), Gaps = 11/125 (8%)
Query: 22 FIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYF 81
I + ++++ ++Y + + E +AWKQG ++ VYH F F
Sbjct: 108 VISYLFYKLEELTPMQLESYLYFIQAYSYP---EPLFHEHCEAWKQGVIYPDVYHLFSTF 164
Query: 82 DSHPIEVIMDLSFRIFPKI---ANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRL 138
P +V D+ ++I + + ++ I N + + + L + + W+
Sbjct: 165 ---PFKVQDDVRYKIIEDAYHHLDDSKKQFIDDILNTFSRYPLKTLVTL--AKTGPWKNN 219
Query: 139 YDPND 143
Y +
Sbjct: 220 YQEDK 224
>gi|227511950|ref|ZP_03941999.1| possible phage-associated protein [Lactobacillus buchneri ATCC
11577]
gi|227524933|ref|ZP_03954982.1| possible phage-associated protein [Lactobacillus hilgardii ATCC
8290]
gi|227084853|gb|EEI20165.1| possible phage-associated protein [Lactobacillus buchneri ATCC
11577]
gi|227087906|gb|EEI23218.1| possible phage-associated protein [Lactobacillus hilgardii ATCC
8290]
Length = 156
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 11/126 (8%)
Query: 21 FFI------DKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+FI + + + +K+ +Y + + + AWK GP V
Sbjct: 10 WFIIVNTDKQRQHPGTEKLTQMKLMFLLYYVQGTFLALYGQKAFSNDVVAWKYGPAVAVV 69
Query: 75 YHRF--KYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+ RF K F + + D+++R + + +I+ + + + + +L E
Sbjct: 70 HQRFRGKRFVTGTVTNEDDVNYRDVN--QDDRLLKIVFEVQETFGNKTAAELSRQTMRER 127
Query: 133 KTWRRL 138
W+
Sbjct: 128 -PWKVT 132
>gi|298695147|gb|ADI98369.1| hypothetical protein SAOV_1906 [Staphylococcus aureus subsp. aureus
ED133]
Length = 175
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 18/155 (11%)
Query: 12 PYSTIAVANFFIDKGVK---YSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQG 68
P +T +A I K + SI D +K+ + +Y + +++DE+ + W G
Sbjct: 5 PNNTYVIAQNLITKYQEITGNSIVGDEMKVHKLMYYIQKTSIALTGNAIIDEQFEGWVHG 64
Query: 69 PVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIV 128
PV + F YF + D + R K+ + E I+E+ +Y ++T L+E
Sbjct: 65 PVLPSLRGLFDYF-------VEDNTSR--NKVNDTE-EFIIENAIYQYGKYATWALREKS 114
Query: 129 QEENKTW---RRLYDPNDPNTNRTITVEEITKMAD 160
EE W R+ N+ +T+E+I + A+
Sbjct: 115 HEEIS-WLNSRKGLSANERGYRN-LTIEDIKEDAN 147
>gi|283469625|emb|CAQ48836.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ST398]
Length = 175
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 18/155 (11%)
Query: 12 PYSTIAVANFFIDKGVK---YSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQG 68
P +T +A I K + SI D +K+ + +Y + +++DE+ + W G
Sbjct: 5 PNNTYVIAQNLITKYQEITGNSIVGDEMKVHKLMYYIQKTSIALTGNAIIDEQFEGWVHG 64
Query: 69 PVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIV 128
PV + F YF + D + R K+ + E I+E+ +Y ++T L+E
Sbjct: 65 PVLPSLRGLFDYF-------VEDNTSR--NKVNDTE-EFIIENAIYQYGKYATWALREKS 114
Query: 129 QEENKTW---RRLYDPNDPNTNRTITVEEITKMAD 160
EE W R+ N+ + +E+I + A+
Sbjct: 115 HEEIS-WLNSRKGLSANERGYRN-LAIEDIKEDAN 147
>gi|160947087|ref|ZP_02094254.1| hypothetical protein PEPMIC_01018 [Parvimonas micra ATCC 33270]
gi|158446221|gb|EDP23216.1| hypothetical protein PEPMIC_01018 [Parvimonas micra ATCC 33270]
Length = 153
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 13/125 (10%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKK--KSMLDEEPQAWKQGPVF 71
+ + A I I +L++Q+ +Y + V KK +++ DE + W+ GPV
Sbjct: 15 NMMNFAEHIIAVANNNDKFITNLQLQKVMYFSMKTVNADKKFLQNLYDEPFKVWRYGPVV 74
Query: 72 VGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
VY ++K F S PI ++ E I K+ + L +E
Sbjct: 75 KSVYDKYKIFVSSPIIAQAEIV----------EDYNIFNDEILKFLDENPFDLVNRSHKE 124
Query: 132 NKTWR 136
K W+
Sbjct: 125 KK-WK 128
>gi|183602546|ref|ZP_02963911.1| hypothetical protein BIFLAC_04406 [Bifidobacterium animalis subsp.
lactis HN019]
gi|219683591|ref|YP_002469974.1| hypothetical protein BLA_1110 [Bifidobacterium animalis subsp.
lactis AD011]
gi|241190620|ref|YP_002968014.1| putative prophage protein [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|241196026|ref|YP_002969581.1| putative prophage protein [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|183218187|gb|EDT88833.1| hypothetical protein BIFLAC_04406 [Bifidobacterium animalis subsp.
lactis HN019]
gi|219621241|gb|ACL29398.1| conserved hypothetical protein [Bifidobacterium animalis subsp.
lactis AD011]
gi|240249012|gb|ACS45952.1| putative prophage protein [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|240250580|gb|ACS47519.1| putative prophage protein [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|289178359|gb|ADC85605.1| hypothetical protein BIF_01886 [Bifidobacterium animalis subsp.
lactis BB-12]
gi|295793609|gb|ADG33144.1| putative prophage protein [Bifidobacterium animalis subsp. lactis
V9]
Length = 170
Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 48/146 (32%), Gaps = 9/146 (6%)
Query: 15 TIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
VA + + + +LK+ +Y + + +E + GPV +
Sbjct: 3 ASDVARHIVAH-YGDAWFLTNLKLNLLVYWCQVGALRDAGAPLFADEIAVGECGPVIPAI 61
Query: 75 YHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKT 134
+ ++ F S I + + + + ++ S+ + + L + +
Sbjct: 62 WAEYEAFGSRMIRLRDEWQVKAL----GENTESLVASVMRELGWLTAADLLNLSNHPDGA 117
Query: 135 WRRLYDPNDPNTNRTITVEEITKMAD 160
W + +I+V I AD
Sbjct: 118 WNAAREQG----YESISVSHIAGSAD 139
>gi|15923906|ref|NP_371440.1| hypothetical protein SAV0916 [Staphylococcus aureus subsp. aureus
Mu50]
gi|156979242|ref|YP_001441501.1| hypothetical protein SAHV_0911 [Staphylococcus aureus subsp. aureus
Mu3]
gi|255005706|ref|ZP_05144307.2| hypothetical protein SauraM_04535 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|14246685|dbj|BAB57078.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu50]
gi|156721377|dbj|BAF77794.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
Length = 210
Score = 76.2 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 67/172 (38%), Gaps = 32/172 (18%)
Query: 13 YSTIAVANFFIDKGVKYSIPI--DHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV 70
Y+ +A +F++ + S +L + + IY K ++DE P + GPV
Sbjct: 3 YNINTIAKWFVENNITSSENSYDGNLTLNKLIYFADAMNYAINNKKLVDEIPVGFANGPV 62
Query: 71 FVGVY--HRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIV 128
+ VY HR++ +S + ++E +++ + + S++++ L E+
Sbjct: 63 YQSVYVDHRYRTLESINSDDAE----------ISEETLKLLRIVKFAFGSYTSQYLSELT 112
Query: 129 QEENKTWRRLYDPNDPNTNRTITVEEITKMADGSNISPENVVEQIKKPVRFD 180
E W+ K+ S I+P+ E + +FD
Sbjct: 113 H-EQTPWKNK-----------------EKLCKKSFINPQLSFEDLTDDEKFD 146
>gi|83311982|ref|YP_422246.1| phage-associated protein [Magnetospirillum magneticum AMB-1]
gi|82946823|dbj|BAE51687.1| Uncharacterized phage-associated protein [Magnetospirillum
magneticum AMB-1]
Length = 189
Score = 75.5 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 21/177 (11%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDV-VLQKKKSMLDEEPQAWKQGPVFV 72
S + V + D+ + I K+ + +YL V + ++ GPV
Sbjct: 7 SCLDVVFWISDQALNDREYIQPQKLHRLLYLAQAYFAVAYHGRKLMPATFVTDAFGPVEP 66
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
V+H F + + I + ++++ ++ IW +Y ++ +QL + + E+
Sbjct: 67 TVFHAF-AYGRPTM---------IEGNMLSEQVSHFLDGIWRRYGPYTADQLTKKI-AEH 115
Query: 133 KTWRRLYDPNDPNTNRTITVEEITKM----ADGSN--ISPENVVEQIKKPVRFDSDS 183
+ N I ++ K A N S + ++Q+ KP S S
Sbjct: 116 AP---VALAMAKGQNEEIPFADMVKYYSEEAAARNRPASAVDSIDQVMKPRMMRSQS 169
>gi|269124040|ref|YP_003306617.1| Putative phage-associated protein [Streptobacillus moniliformis DSM
12112]
gi|268315366|gb|ACZ01740.1| Putative phage-associated protein [Streptobacillus moniliformis DSM
12112]
Length = 169
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 13/122 (10%)
Query: 16 IAVANFFIDKGVK-YSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
I VA F + + + YS ID +K+Q+ IY T + +L + E+ +AW+ GPV + V
Sbjct: 10 IEVARFIVKRYKEMYSENIDEIKLQKLIYFTQKESILYTGNLLFIEKMKAWRLGPVSIKV 69
Query: 75 YHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKT 134
+ ++ + + + + F K I+ ++ KY +S+ +L + +E
Sbjct: 70 RNGYR----NRSVNKQNYNLKTFNKY-------IINNVIIKYGLYSSSKLINLTHKER-A 117
Query: 135 WR 136
W+
Sbjct: 118 WK 119
>gi|42561013|ref|NP_975464.1| hypothetical protein MSC_0478 [Mycoplasma mycoides subsp.
mycoides SC str. PG1]
gi|42492510|emb|CAE77106.1| Conserved hypothetical protein [Mycoplasma mycoides subsp.
mycoides SC str. PG1]
Length = 73
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 6/73 (8%)
Query: 11 PPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKK-SMLDEEPQAWKQGP 69
P YS ++++F+ K + K+Q+ Y + + D QAW GP
Sbjct: 6 PKYSYKDISDWFLSK-----ESMTPKKLQKLTYYAEAWAYALFDEGILSDTSFQAWIHGP 60
Query: 70 VFVGVYHRFKYFD 82
V ++ +K +
Sbjct: 61 VSPELWRDYKDYG 73
>gi|283470703|emb|CAQ49914.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ST398]
Length = 148
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 17/143 (11%)
Query: 12 PYSTIAVANFFIDKGVK---YSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQG 68
P +T +A I K + SI D +K+ + +Y + +++DE+ + W G
Sbjct: 5 PNNTYVIAQNLITKYQEITGNSIVGDEMKVHKLMYYIQKTSIALTGNAIIDEQFEGWVHG 64
Query: 69 PVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIV 128
PV + F YF + D + R K+ + E I+E+ +Y ++T L+E
Sbjct: 65 PVLPSLRGLFDYF-------VEDNTSR--NKVNDTE-EFIIENAIYQYGKYATWALREKS 114
Query: 129 QEENKTW---RRLYDPNDPNTNR 148
EE W R+ N+
Sbjct: 115 HEEIS-WLNSRKGLSANERGYRN 136
>gi|260664304|ref|ZP_05865157.1| conserved hypothetical protein [Lactobacillus jensenii SJ-7A-US]
gi|260562190|gb|EEX28159.1| conserved hypothetical protein [Lactobacillus jensenii SJ-7A-US]
Length = 158
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 73/155 (47%), Gaps = 22/155 (14%)
Query: 12 PYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKS-------ML-DEEPQ 63
Y++ VAN+F+ I K+Q +Y ++ + +S + D++
Sbjct: 6 KYTSNEVANYFLAI---DKGNISVKKLQILVYYSYAWTLTLLNESSDNLINKLFEDDKFI 62
Query: 64 AWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQ 123
A GP + +Y ++K + I+ + I +Q++ +I++ +W +Y +++ Q
Sbjct: 63 AGVHGPKIMKIYKKYKSYGFSAIQDKPER------PIFSQKVEDILDQVWKEYGNYTGVQ 116
Query: 124 LQEIVQEENKTW---RRLYDPNDPNTNRTITVEEI 155
L+ I+Q+E W R + P D T + I+ ++I
Sbjct: 117 LESIIQQEQ-PWINARVGFSPIDKCT-KVISDKDI 149
>gi|306830690|ref|ZP_07463855.1| phage protein [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
gi|304427198|gb|EFM30305.1| phage protein [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
Length = 142
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 47/126 (37%), Gaps = 19/126 (15%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLT---HCDVV-LQKKKSMLDEEPQAWKQGPVFVG 73
+AN I +PI +L++Q+ +Y T + K +E W+ GPV
Sbjct: 6 LANHIIAVAHDNELPITNLQLQKILYFTLRNSRRYLDEDTLKETYNEPFLVWRYGPVVES 65
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQ---- 129
Y+RF + S PI SF PK N + + + ++ +
Sbjct: 66 QYNRFYSYGSSPIID----SFNQIPKYEN------LNQMILHFLKIDVFRMVDASHTHKF 115
Query: 130 -EENKT 134
+EN
Sbjct: 116 WKENSP 121
>gi|312199397|ref|YP_004019458.1| hypothetical protein FraEuI1c_5603 [Frankia sp. EuI1c]
gi|311230733|gb|ADP83588.1| hypothetical protein FraEuI1c_5603 [Frankia sp. EuI1c]
Length = 197
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 54/159 (33%), Gaps = 13/159 (8%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
S VA + +++ + ++Q+ +Y T + + ++ +A GPV +
Sbjct: 4 SVDDVAAYLLERLGA----LTVARLQRLVYYTQAWHLADHHVHLFEDPIEARADGPVVLR 59
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
++ + + P+ +++E + Y S +L IV+ E
Sbjct: 60 LHDQ--AGGRDEVHEWPAGD----PRRLGARARDVIEWVLGAYGSFPDAELARIVRAE-A 112
Query: 134 TWRRLYDPNDPNTN--RTITVEEITKMADGSNISPENVV 170
WR + I + D SP+ V
Sbjct: 113 PWRLARQGRRVARRPAKAIDPTVMATYYDRLRSSPDAAV 151
>gi|38233401|ref|NP_939168.1| hypothetical protein DIP0802 [Corynebacterium diphtheriae NCTC
13129]
gi|38199661|emb|CAE49320.1| Putative phage protein [Corynebacterium diphtheriae]
Length = 165
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 16/133 (12%)
Query: 8 QTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQ 67
+ + YS+ VAN + + +D K+ + +Y + + + QAW
Sbjct: 9 RVHGIYSSTDVANLILK--TTGTALMDKKKLHKLLYYMQGWTLAALGRPAFANDLQAWVD 66
Query: 68 GPVFVGV-----YHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTE 122
GPV VG+ Y + P+ + ++++ +M I Y T+
Sbjct: 67 GPVSVGMRRDTHYATCFEVANRPLSNPL--------APQDRDLLALMYLIAPFYAQQQTQ 118
Query: 123 QLQEIVQEENKTW 135
L + E W
Sbjct: 119 ALVDSTHAE-APW 130
>gi|227508502|ref|ZP_03938551.1| conserved hypothetical protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227192152|gb|EEI72219.1| conserved hypothetical protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 117
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 52/119 (43%), Gaps = 16/119 (13%)
Query: 17 AVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKS------MLDEEPQAWKQGPV 70
+A+ I + ++PI +L++Q+ ++ + D ++ + S + D+ W+ GPV
Sbjct: 5 DLAHHIIGIAQEKNLPITNLQLQKVMFFSLKDAIVNHRFSESALMRIYDKPFLVWRYGPV 64
Query: 71 FVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
+Y ++ + + PI I P +N + + E I + + +L +
Sbjct: 65 EKDIYDEYRIYGADPI---------IEPNKSNSDFESLNEKIISLLEE-DPFELVQQSH 113
>gi|296328507|ref|ZP_06871026.1| gp27 family protein [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
gi|296154316|gb|EFG95115.1| gp27 family protein [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
Length = 113
Score = 70.4 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 11/105 (10%)
Query: 16 IAVANF-FIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+ VA + F + ID +K+Q+ +Y + + + K M E + WK GPV V
Sbjct: 17 LNVAEYIFKEYYRISGEYIDEMKLQKLLYFSQRESLAILNKPMFSENFEGWKYGPVSREV 76
Query: 75 YHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSH 119
F P + I + I E I+ +I +Y S
Sbjct: 77 RTYF-----TPKDGITTNTEDI-----KSENKYIINNIILEYGSL 111
>gi|28211725|ref|NP_782669.1| hypothetical protein CTC02108 [Clostridium tetani E88]
gi|28204167|gb|AAO36606.1| hypothetical protein CTC_02108 [Clostridium tetani E88]
Length = 223
Score = 70.4 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 14 STIAVANFFIDKGVKYSIPID-HLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
I+VA +FI+ K + +LK+ + +Y ++++ K + +EE A++ G V
Sbjct: 3 KAISVAGWFINNDFKPTNDKSGNLKLNKLLYFAQMISLIKRNKPLFEEELYAFENGVVVE 62
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+ + +++ + K N++ +I+ES + + S E L E+ +
Sbjct: 63 KIRKDYCNNYDDFVKLAKEYD-----KNFNEDEIDILESTKELFLNVSPEDLSELTHQHK 117
Query: 133 KTWRRLYDPN 142
W+ Y+ +
Sbjct: 118 C-WKHYYNKS 126
>gi|182681368|ref|YP_001829528.1| hypothetical protein XfasM23_0815 [Xylella fastidiosa M23]
gi|182631478|gb|ACB92254.1| hypothetical protein XfasM23_0815 [Xylella fastidiosa M23]
Length = 77
Score = 70.4 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 31/64 (48%)
Query: 38 IQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIF 97
+ + +YL H + + ++DE +AW+ GP+ +Y+ K+ S I + + +
Sbjct: 1 MLKLVYLAHGWCLGVHTQPLIDELVEAWRAGPLIRSLYNVIKHDRSSGITEWLPVRWFSC 60
Query: 98 PKIA 101
+ +
Sbjct: 61 GRAS 64
>gi|46201439|ref|ZP_00055053.2| COG3600: Uncharacterized phage-associated protein [Magnetospirillum
magnetotacticum MS-1]
Length = 179
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 69/195 (35%), Gaps = 29/195 (14%)
Query: 21 FFIDKGVKYSIPIDHLKIQQFIYLTHCDV-VLQKKKSMLDEEPQAWKQGPVFVGVYHRFK 79
+ D+ + I K+ + +YL+ V + ++ GPV V+H F
Sbjct: 4 WISDQALNDREYIQPQKLHRLLYLSQAYFAVAYHGRKLMPATFVTDAFGPVEPTVFHAF- 62
Query: 80 YFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQE--IVQEENKTWRR 137
+ + I + ++++ ++ IW +Y ++ +QL + I
Sbjct: 63 AYGRPTM---------IEGNMLSEQVSHFLDGIWRRYGPYTADQLTKKIIEHAP------ 107
Query: 138 LYDPNDPNTNRTITVEEITKM----ADGSNISPENV--VEQIKKPVRFDSDSEFATLESQ 191
+ N I ++ K A N NV ++ + KP S T +
Sbjct: 108 VALAMAKGQNEEIPFADMVKYYSEAAAARNNPASNVDSIDTVMKPRMMRSQ----TGKPV 163
Query: 192 LVKGFKSMPPQLTKE 206
V +K P + K+
Sbjct: 164 TVAAWKPKPASVKKD 178
>gi|153932085|ref|YP_001385252.1| hypothetical protein CLB_2956 [Clostridium botulinum A str. ATCC
19397]
gi|152928129|gb|ABS33629.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
19397]
Length = 223
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 58/132 (43%), Gaps = 9/132 (6%)
Query: 14 STIAVANFFIDKGVKYSIPID-HLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
I +A +FI+ +S + ++K+ + +Y + +++ K + +++ A+K G V
Sbjct: 3 KAIEIAKWFINNNDGFSNSFEGNMKLNKLLYFSQLISLVKNDKPLFNDDLYAFKNGVVIE 62
Query: 73 GVYHR-FKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
V + + + ++F + +E EI++ + + ++L ++ E
Sbjct: 63 SVRKEYYCNYSQ------LKKDAKLFKESFTEEEKEILKIGSEIFGNVDADELSQLTH-E 115
Query: 132 NKTWRRLYDPND 143
+ W Y+ +
Sbjct: 116 HACWNDYYNKSK 127
>gi|83592965|ref|YP_426717.1| hypothetical protein Rru_A1630 [Rhodospirillum rubrum ATCC 11170]
gi|83575879|gb|ABC22430.1| hypothetical protein Rru_A1630 [Rhodospirillum rubrum ATCC 11170]
Length = 202
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 60/153 (39%), Gaps = 18/153 (11%)
Query: 9 TNPPY--STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDV-VLQKKKSMLDEEPQAW 65
T PP +T VAN+FID+ + + + K+ + ++L V + ++ A
Sbjct: 4 TRPPLVETTFDVANWFIDRALNDNEYLQPQKLHRLMFLAQAYFAVANNGQRLMPAIFIAD 63
Query: 66 KQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQ 125
GP+ +Y F I + ++ +++IW ++ HS E L
Sbjct: 64 AVGPLEPNIYRAF-----------ETQKAWITQEKMPEKATLFLDNIWRRFGGHSAEHLS 112
Query: 126 EIVQEENKTWRRLYDPNDPNTNRTITVEEITKM 158
+++ ++ + + + IT E +
Sbjct: 113 KVI-RKHPPYAEAFAEHP---RSVITEEAMVAF 141
>gi|76787839|ref|YP_330667.1| hypothetical protein SAK_2077 [Streptococcus agalactiae A909]
gi|76562896|gb|ABA45480.1| conserved hypothetical protein [Streptococcus agalactiae A909]
Length = 168
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 49/145 (33%), Gaps = 20/145 (13%)
Query: 34 DHLKIQQFIYLTHCDVVLQKK----------------KSMLDEEPQAWKQGPVFVGVYHR 77
+K+Q+ +YL K + +AW+ GPV VY +
Sbjct: 24 TQIKVQKTLYLLFAFYGATYGNLDKDEDNEFSDQNYPKQLFKAIFEAWRYGPVETDVYAK 83
Query: 78 FKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRR 137
K I + + + F + + + +E+I + L + ++N W
Sbjct: 84 EKSGSYSDIAINEENINKFFNTPELKNVRDFIENIVEQTNQIDDFSLVDRTHQDNV-WLD 142
Query: 138 LYDPND---PNTNRTITVEEITKMA 159
+Y + P N I E I +
Sbjct: 143 VYKEGESHIPMENEKIIQEYIDRYV 167
>gi|197294760|ref|YP_001799301.1| Putative phage associated protein [Candidatus Phytoplasma
australiense]
gi|171854087|emb|CAM12064.1| Putative phage associated protein [Candidatus Phytoplasma
australiense]
Length = 68
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKK-SMLDEEPQAWKQGPVFV 72
+ VAN+ I+ H+K+ + IY + +++ + +AW GPV
Sbjct: 8 NVFDVANYIIE---NNPHKTTHMKLHKMIYYAYAKYLMKHNSLPNFKDSFRAWIYGPVLP 64
Query: 73 GVYH 76
+Y+
Sbjct: 65 ELYN 68
>gi|265763443|ref|ZP_06092011.1| predicted protein [Bacteroides sp. 2_1_16]
gi|263256051|gb|EEZ27397.1| predicted protein [Bacteroides sp. 2_1_16]
Length = 182
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 54/142 (38%), Gaps = 17/142 (11%)
Query: 22 FIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYF 81
+ I+ K+ + ++L + V + S+ AW++GPV +Y K
Sbjct: 9 LLAYISSKIEDINLRKLIKLVFLIDEESVRSRGISVTWLTYYAWEKGPVAPCIY-EIKDR 67
Query: 82 D-----SHPIEVIMDLSFRIFPKIANQEIG--------EIMESIWNKYQSHSTEQLQEIV 128
+ + I P + E +++SI +KY S + L EI
Sbjct: 68 GGIFSKYISVHRNREEKVIITPFVDKNESSIQFSKKELRLIDSIIDKYGQLSADDLSEIT 127
Query: 129 QEENKTW---RRLYDPNDPNTN 147
+ W ++ Y+PN ++N
Sbjct: 128 HKPGGLWDIAKKKYNPNFKSSN 149
>gi|315652286|ref|ZP_07905278.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
gi|315485409|gb|EFU75799.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
Length = 203
Score = 68.9 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 58/140 (41%), Gaps = 11/140 (7%)
Query: 17 AVANFFIDKG--VKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+A +F+ K ++ ++ K+ + +Y +H +++ + + W GPV +
Sbjct: 5 DLAKWFLIKNPVLRDGYIDENTKLNKLLYFSHLMYYAITNQNLTNCVFEKWDNGPVSREI 64
Query: 75 YHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKT 134
Y ++Y + + I NQ I +I++ + Y + + +L E +
Sbjct: 65 YIAYRY-------EELGCHYDDAADIINQHILKILQIVNFVYANKTARELSEETHT-HSI 116
Query: 135 WRRLYDPNDPNTNRTITVEE 154
W+ + N+ I+ +E
Sbjct: 117 WQEV-GRNEKIIFENISPKE 135
>gi|288927052|ref|ZP_06420944.1| conserved hypothetical protein [Prevotella buccae D17]
gi|288336190|gb|EFC74579.1| conserved hypothetical protein [Prevotella buccae D17]
Length = 187
Score = 68.9 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 69/178 (38%), Gaps = 27/178 (15%)
Query: 21 FFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR--- 77
+ ++K I H + + IY + + + M+ ++ +A++ GPV +Y
Sbjct: 17 YILNK--TQGTDIYH--VLKIIYFANQKHLAKWGTPMIRDDFRAYEYGPVSDQLYKAMHD 72
Query: 78 -----------FK---YFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQ 123
FK Y+ + S + K ++ E+++ + + Q
Sbjct: 73 NHKYGDELPELFKQTAYYAGDDARSNILPSRKPDMKYLSKAAIEVLDQSIAENAGLTFPQ 132
Query: 124 LQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKMADGSNISPENVVEQIKKPVRFDS 181
L E + W+ ++ N + ++ I K A G+ E ++E IK+ + D+
Sbjct: 133 LLEKSH--DSAWQEAWERKAKNGDDLMSPTSIAK-AAGAK---EAMLEYIKEQMEIDA 184
>gi|225021857|ref|ZP_03711049.1| hypothetical protein CORMATOL_01889 [Corynebacterium matruchotii
ATCC 33806]
gi|224945405|gb|EEG26614.1| hypothetical protein CORMATOL_01889 [Corynebacterium matruchotii
ATCC 33806]
Length = 179
Score = 68.1 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 38/109 (34%), Gaps = 16/109 (14%)
Query: 33 IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDL 92
+D +K+ + Y + + + E QAW GP+ + + R K
Sbjct: 18 VDTMKLYKLCYFSQGWKLAWTGCLLFQEPLQAWANGPIPIALRDRSKPGGD--------- 68
Query: 93 SFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDP 141
+ + E+ + ES+ + Y + +L + K W+
Sbjct: 69 ----ATNLTDTELHTV-ESVVDFYGDKDSIELSRLS--RGKAWKEARRN 110
>gi|328464139|gb|EGF35610.1| Phage associated protein [Lactobacillus helveticus MTCC 5463]
Length = 219
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Query: 5 TFTQTNPPYSTIAVANFF-IDKGVKYSI-----PIDHLKIQQFIYLTHCDVVLQKKKSML 58
+ P + + +AN+F ++ PI +++ + +Y + +++ KK +
Sbjct: 108 GISSEQPKFKAVQLANWFRVNNYFARQFDYNVDPITQMQVVKLLYFAYGRFLVKSKKRLF 167
Query: 59 DEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKI-ANQEIGEIM 109
+ GPV V+ +F+ + +F + + ++ EI +++
Sbjct: 168 SSPILHLQYGPVVEEVHQQFRGMVVPDPDKPDKQAFEDYNLVSSDAEINDLL 219
>gi|296386742|ref|ZP_06876241.1| hypothetical protein PaerPAb_01360 [Pseudomonas aeruginosa PAb1]
Length = 175
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 55/149 (36%), Gaps = 21/149 (14%)
Query: 19 ANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRF 78
A FF+ P+ HL + + +YL + + + M D+ + GPV
Sbjct: 2 AAFFLASA---EGPLPHLTLIKLLYLADRESMARFDVPMSDDRAVSMPHGPVLSSTLDLI 58
Query: 79 K-------------YFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQ 125
K H + ++ D+ ++ I+ES+W ++ + QL+
Sbjct: 59 KGRLRSEVWSAWISPLVDHEVRLVHDVENWDDLDELSRSDRSILESVWQEFGHMTKYQLR 118
Query: 126 EIVQEENKTWRRLYDPNDPNTNRTITVEE 154
+ W DP+ ++R I ++
Sbjct: 119 DYTHHHIGEWH---DPH--GSSRDIDPKD 142
>gi|116054432|ref|YP_788408.1| hypothetical protein PA14_03163 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115589653|gb|ABJ15668.1| hypothetical protein PA14_03163 [Pseudomonas aeruginosa UCBPP-PA14]
Length = 207
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 55/149 (36%), Gaps = 21/149 (14%)
Query: 19 ANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRF 78
A FF+ P+ HL + + +YL + + + M D+ + GPV
Sbjct: 34 AAFFLASA---EGPLPHLTLIKLLYLADRESMARFDVPMSDDRAVSMPHGPVLSSTLDLI 90
Query: 79 K-------------YFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQ 125
K H + ++ D+ ++ I+ES+W ++ + QL+
Sbjct: 91 KGRLRSEVWSAWISPLVDHEVRLVHDVENWDDLDELSRSDRSILESVWQEFGHMTKYQLR 150
Query: 126 EIVQEENKTWRRLYDPNDPNTNRTITVEE 154
+ W DP+ ++R I ++
Sbjct: 151 DYTHHHIGEWH---DPH--GSSRDIDPKD 174
>gi|153868855|ref|ZP_01998590.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152074576|gb|EDN71417.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 203
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 53/145 (36%), Gaps = 18/145 (12%)
Query: 16 IAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVY 75
I V +F K +K+ + +Y + Q +S+ AW GPV V +Y
Sbjct: 19 INVMVYFAQNTQKCGK----VKLFKLMYFLDFEHYKQIGRSVTGLNYYAWPLGPVPVDLY 74
Query: 76 HRFKYFDSH--------PIEVIMDLSFRIFPKIA------NQEIGEIMESIWNKYQSHST 121
F + PI V L I P ++ +M + N+Y S
Sbjct: 75 AEFDVPAADMLSCIQFEPIPVKNGLMLFIQPIAEFDNRYFSKRELRLMAQLVNQYNDTSA 134
Query: 122 EQLQEIVQEENKTWRRLYDPNDPNT 146
E++ E E+K W+R+Y
Sbjct: 135 EEIIEASHLEHKPWQRVYIQEGKKQ 159
>gi|254884185|ref|ZP_05256895.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|254836978|gb|EET17287.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
Length = 196
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 73/183 (39%), Gaps = 30/183 (16%)
Query: 14 STIAVAN-----FFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQG 68
+ I +A +I + +D++K+ + +Y D +++ K ++++ +A K G
Sbjct: 14 TAIQIAKIRAVVLYIMQSFTQG--VDYIKLFKILYFAQQDHLVKYGKVIVEDSFRALKHG 71
Query: 69 PVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEI---------------GEIMESIW 113
PV Y + + P++ D F ++ ++++ +++
Sbjct: 72 PVPAYTYKALQIAEGKPLDGNFD-EFLSDIEVRDKKVYTSAVPDMDYISGANKRCLDAAI 130
Query: 114 NKYQSHSTEQLQEIVQEENKTWRRLYDP-NDPNTNRTITVEEITKMADGSNISPENVVEQ 172
KY+ L ++ + W D IT+ +I + + + E++V+
Sbjct: 131 AKYKDTDPYDLSDLSH--DSAWEEAMTRIQDDPQKNFITIIDIAR----AGKATEDMVDY 184
Query: 173 IKK 175
I++
Sbjct: 185 IRE 187
>gi|319941572|ref|ZP_08015898.1| hypothetical protein HMPREF9464_01117 [Sutterella wadsworthensis
3_1_45B]
gi|319804942|gb|EFW01784.1| hypothetical protein HMPREF9464_01117 [Sutterella wadsworthensis
3_1_45B]
Length = 189
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 66/158 (41%), Gaps = 21/158 (13%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
VA + + K + LK+ + +Y+ +LQ + + ++ + GPV
Sbjct: 6 KATHVAAYLL---WKRGRRMSSLKLMKMMYIAEKQFLLQYGERLTGDKMVSMPYGPVLSA 62
Query: 74 VYHRF----KYFDSHPI-----EVIMDLSFRIFPKIANQEIGE-------IMESIWNKYQ 117
Y F +Y+DS I ++ ++ S ++ P E +++S+++K+
Sbjct: 63 TYDCFMGDREYWDSWIINPGNYDLALNSSIKVDPADPLDTFDELSVAEKTVLDSVYSKFG 122
Query: 118 SHSTEQLQEIVQEEN--KTWRRLYDPNDPNTNRTITVE 153
+ + L +++ + + W + P +++ ++
Sbjct: 123 ASNRWDLVKLLHDPDYCPEWENPQGSSYPIHIKSLLMK 160
>gi|255013704|ref|ZP_05285830.1| hypothetical protein B2_07347 [Bacteroides sp. 2_1_7]
gi|265763564|ref|ZP_06092132.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|313146832|ref|ZP_07809025.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|263256172|gb|EEZ27518.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|313135599|gb|EFR52959.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 185
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 73/183 (39%), Gaps = 30/183 (16%)
Query: 14 STIAVAN-----FFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQG 68
+ I +A +I + +D++K+ + +Y D +++ K ++++ +A K G
Sbjct: 3 TAIQIAKIRAVVLYIMQSFTQG--VDYIKLFKILYFAQQDHLVKYGKVIVEDSFRALKHG 60
Query: 69 PVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEI---------------GEIMESIW 113
PV Y + + P++ D F ++ ++++ +++
Sbjct: 61 PVPAYTYKALQIAEGKPLDGNFD-EFLSDIEVRDKKVYTSAVPDMDYISGANKRCLDAAI 119
Query: 114 NKYQSHSTEQLQEIVQEENKTWRRLYDP-NDPNTNRTITVEEITKMADGSNISPENVVEQ 172
KY+ L ++ + W D IT+ +I + + + E++V+
Sbjct: 120 AKYKDTDPYDLSDLSH--DSAWEEAMTRIQDDPQKNFITIIDIAR----AGKATEDMVDY 173
Query: 173 IKK 175
I++
Sbjct: 174 IRE 176
>gi|52839993|gb|AAU87900.1| unknown [Helicobacter pylori]
Length = 59
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 23 IDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFD 82
I+ + PI +LK+Q+ +YL + ++ E+ QAW GPV VY F
Sbjct: 1 INLSLDNQKPIINLKLQKMLYLY--IAQAEGDSKLIKEDFQAWDYGPVIPDVYRNFCING 58
Query: 83 S 83
S
Sbjct: 59 S 59
>gi|255009083|ref|ZP_05281209.1| hypothetical protein Bfra3_08076 [Bacteroides fragilis 3_1_12]
Length = 168
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 33 IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDL 92
+D++K+ + +Y D +++ K ++++ +A K GPV Y + + P++ D
Sbjct: 8 VDYIKLFKILYFAQQDHLVKYGKVIVEDSFRALKHGPVPAYTYKALQIAEGKPLDGNFD- 66
Query: 93 SFRIFPKIANQEI---------------GEIMESIWNKYQSHSTEQLQEIVQEENKTWRR 137
F ++ ++++ +++ KY+ L ++ + W
Sbjct: 67 EFLSDIEVRDKKVYTSAVPDMDYISGANKRCLDAAIAKYKDTDPYDLSDLSH--DSAWEE 124
Query: 138 LYDP-NDPNTNRTITVEEITKMADGSNISPENVVEQIKK 175
D IT+ +I + + + E++V+ I++
Sbjct: 125 AMTRIQDDPQKNFITIIDIAR----AGKATEDMVDYIRE 159
>gi|59801954|ref|YP_208666.1| putative phage associated protein [Neisseria gonorrhoeae FA 1090]
gi|240017306|ref|ZP_04723846.1| putative phage associated protein [Neisseria gonorrhoeae FA6140]
gi|240128886|ref|ZP_04741547.1| putative phage associated protein [Neisseria gonorrhoeae
SK-93-1035]
gi|291043460|ref|ZP_06569176.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|293398762|ref|ZP_06642931.1| phage associated protein [Neisseria gonorrhoeae F62]
gi|59718849|gb|AAW90254.1| hypothetical protein, putative phage associated protein [Neisseria
gonorrhoeae FA 1090]
gi|291011923|gb|EFE03912.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|291610819|gb|EFF39925.1| phage associated protein [Neisseria gonorrhoeae F62]
Length = 215
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 74/201 (36%), Gaps = 35/201 (17%)
Query: 2 KKRTFTQTNPPYS--------TIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQK 53
+K ++ P++ A F + K ++ LK+ + +YL + L+
Sbjct: 14 RKPHIIKSMKPHNDTIFQEPKAAQAAAFLLYKANGR---LEVLKLMKLMYLAERESFLRF 70
Query: 54 KKSMLDEEPQAWKQGPV--------------FVGVYHRFKYFDSHPIEVIMDLSFRIFP- 98
+ + + + GPV + + + + + D S P
Sbjct: 71 GEGLTGDALVSMPHGPVLSMTLDFINGGHESVPNGWATWVSDRENRMLALRDPSMIRTPG 130
Query: 99 ---KIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKT-WRRLYDPNDPNTNRTITVEE 154
++ E++ES+W Y +S L+ + W DP+ ++R I +++
Sbjct: 131 QDLSALSEADLEVLESVWENYGHYSAWDLRNMTHNGLCPEWE---DPH--GSSRPIPIKK 185
Query: 155 ITKMADGSNISPENVVEQIKK 175
+ + + +VE++++
Sbjct: 186 LLSVLGYDDEQAVAIVERLEE 206
>gi|240014861|ref|ZP_04721774.1| putative phage associated protein [Neisseria gonorrhoeae DGI18]
gi|240081052|ref|ZP_04725595.1| putative phage associated protein [Neisseria gonorrhoeae FA19]
gi|240113262|ref|ZP_04727752.1| putative phage associated protein [Neisseria gonorrhoeae MS11]
gi|240115327|ref|ZP_04729389.1| putative phage associated protein [Neisseria gonorrhoeae PID18]
gi|240118671|ref|ZP_04732733.1| putative phage associated protein [Neisseria gonorrhoeae PID1]
gi|240121950|ref|ZP_04734912.1| putative phage associated protein [Neisseria gonorrhoeae PID24-1]
gi|240124215|ref|ZP_04737171.1| putative phage associated protein [Neisseria gonorrhoeae PID332]
gi|260440168|ref|ZP_05793984.1| putative phage associated protein [Neisseria gonorrhoeae DGI2]
gi|268597164|ref|ZP_06131331.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268599342|ref|ZP_06133509.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268601012|ref|ZP_06135179.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268604383|ref|ZP_06138550.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268682841|ref|ZP_06149703.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|268687267|ref|ZP_06154129.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
gi|268550952|gb|EEZ45971.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268583473|gb|EEZ48149.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268585143|gb|EEZ49819.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268588514|gb|EEZ53190.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268623125|gb|EEZ55525.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|268627551|gb|EEZ59951.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
Length = 194
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 73/194 (37%), Gaps = 28/194 (14%)
Query: 1 MKKRTFTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDE 60
MK T P + A A F + K ++ LK+ + +YL + L+ + + +
Sbjct: 1 MKPHNDTIFQEPKAAQA-AAFLLYKANGR---LEVLKLMKLMYLAERESFLRFGEGLTGD 56
Query: 61 EPQAWKQGPV--------------FVGVYHRFKYFDSHPIEVIMDLSFRIFP----KIAN 102
+ GPV + + + + + D S P +
Sbjct: 57 ALVSMPHGPVLSMTLDFINGGHESVPNGWATWVSDRENRMLALRDPSMIRTPGQDLSALS 116
Query: 103 QEIGEIMESIWNKYQSHSTEQLQEIVQEENKT-WRRLYDPNDPNTNRTITVEEITKMADG 161
+ E++ES+W Y +S L+ + W DP+ ++R I ++++ +
Sbjct: 117 EADLEVLESVWENYGHYSAWDLRNMTHNGLCPEWE---DPH--GSSRPIPIKKLLSVLGY 171
Query: 162 SNISPENVVEQIKK 175
+ +VE++++
Sbjct: 172 DDEQAVAIVERLEE 185
>gi|53714150|ref|YP_100142.1| hypothetical protein BF2859 [Bacteroides fragilis YCH46]
gi|224026702|ref|ZP_03645068.1| hypothetical protein BACCOPRO_03459 [Bacteroides coprophilus DSM
18228]
gi|237719895|ref|ZP_04550376.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|253567326|ref|ZP_04844775.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|256840307|ref|ZP_05545815.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|293369551|ref|ZP_06616129.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
gi|294644266|ref|ZP_06722034.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
gi|294806708|ref|ZP_06765538.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
gi|298483929|ref|ZP_07002100.1| conserved hypothetical protein [Bacteroides sp. D22]
gi|52217015|dbj|BAD49608.1| conserved hypothetical protein related to phage [Bacteroides
fragilis YCH46]
gi|224019938|gb|EEF77936.1| hypothetical protein BACCOPRO_03459 [Bacteroides coprophilus DSM
18228]
gi|229450447|gb|EEO56238.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|251943895|gb|EES84423.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|256737579|gb|EEU50905.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|292635255|gb|EFF53769.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
gi|292640337|gb|EFF58587.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
gi|294446085|gb|EFG14722.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
gi|298269989|gb|EFI11579.1| conserved hypothetical protein [Bacteroides sp. D22]
Length = 185
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 63/165 (38%), Gaps = 26/165 (15%)
Query: 14 STIAVAN-----FFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQG 68
+ I +A +I + +D++K+ + +Y D +++ K ++++ +A K G
Sbjct: 3 TAIQIAKIRAVVLYIMQSFTQG--VDYIKLFKILYFAQQDHLVKYGKVIVEDSFRALKHG 60
Query: 69 PVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEI---------------GEIMESIW 113
PV Y + + P++ D F ++ ++++ +++
Sbjct: 61 PVPAYTYKALQIAEGKPLDGNFD-EFLSDIEVRDKKVYTSAVPDMDYISGANKRCLDAAI 119
Query: 114 NKYQSHSTEQLQEIVQEENKTWRRLYDP-NDPNTNRTITVEEITK 157
KY+ L ++ + W D IT+ +I +
Sbjct: 120 AKYKDTDPYDLSDLSH--DSAWEEAMTRIQDDPQKNFITIIDIAR 162
>gi|260102197|ref|ZP_05752434.1| xre family toxin-antitoxin system [Lactobacillus helveticus DSM
20075]
gi|260083994|gb|EEW68114.1| xre family toxin-antitoxin system [Lactobacillus helveticus DSM
20075]
Length = 219
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Query: 5 TFTQTNPPYSTIAVANFF-IDKGVKYSI-----PIDHLKIQQFIYLTHCDVVLQKKKSML 58
+ P + + +AN+F ++ PI +++ + +Y + +++ KK +
Sbjct: 108 GISSEQPKFKAVQLANWFRVNNYFARQFDYNVDPIMQMQVVKLLYFAYGRFLVKSKKRLF 167
Query: 59 DEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKI-ANQEIGEIM 109
+ GPV V+ +F+ + +F + + ++ EI +++
Sbjct: 168 SSPILHLQYGPVVEEVHQQFRGMVVPDPDKPDKQAFEDYNLVSSDAEINDLL 219
>gi|261207991|ref|ZP_05922670.1| predicted protein [Enterococcus faecium TC 6]
gi|289567528|ref|ZP_06447873.1| predicted protein [Enterococcus faecium D344SRF]
gi|260077790|gb|EEW65502.1| predicted protein [Enterococcus faecium TC 6]
gi|289160676|gb|EFD08631.1| predicted protein [Enterococcus faecium D344SRF]
Length = 221
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 46/121 (38%), Gaps = 21/121 (17%)
Query: 19 ANFFIDKGVKYSIPI--DHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV-- 74
A FF+ K + + ++K+Q+ ++ + + + +E A++ G V V
Sbjct: 8 AKFFLKKNLDSNPNTFDGNMKLQKLLFFANLINFSKHNSLLFEESMLAFENGTVIEEVRK 67
Query: 75 -----YHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
YH +K + F QE ++ + + + S ++L E+
Sbjct: 68 RYKNDYHSYKQDAKN------------FNPDFTQEEYNVLNDTISIFGNLSAKELSELNH 115
Query: 130 E 130
+
Sbjct: 116 Q 116
>gi|256847921|ref|ZP_05553366.1| GepA protein [Lactobacillus coleohominis 101-4-CHN]
gi|256715610|gb|EEU30586.1| GepA protein [Lactobacillus coleohominis 101-4-CHN]
Length = 235
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 57/159 (35%), Gaps = 20/159 (12%)
Query: 7 TQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWK 66
++ + +A++ + +D +Q+ +Y + + + + + A+
Sbjct: 83 MKSKSELNDEDIASYL-----QTKYHLDAFSLQKVLYYGYAGFLTEFHQRPFNAHFIAFS 137
Query: 67 QGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQ-EIGEIMESIWNKYQSHSTE--- 122
GPV ++ KY M+ F KIA + +I + ++ + KY + +
Sbjct: 138 HGPVDYDIWKWIKYS-----PETMNYQFDFLQKIAAKPKIKQYLDGVVKKYGQYFQKTNS 192
Query: 123 ---QLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKM 158
+ W R Y N IT ++I K
Sbjct: 193 FKNDDENPTHNLGTPWSRAYAK---GQNTPITDDDILKY 228
>gi|13095915|ref|NP_076824.1| Orf24 [Lactococcus phage bIL312]
gi|15672508|ref|NP_266682.1| hypothetical protein L114740 [Lactococcus lactis subsp. lactis
Il1403]
gi|12723410|gb|AAK04624.1|AE006287_3 unknown protein [Lactococcus lactis subsp. lactis Il1403]
gi|12831126|gb|AAK08477.1|AF323673_24 Orf24 [Lactococcus phage bIL312]
Length = 162
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 50/151 (33%), Gaps = 25/151 (16%)
Query: 20 NFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKK---------------KSMLDEEPQA 64
+ + + + LK+Q+ +Y + K + + +A
Sbjct: 11 DELVQHLIFKYKELSPLKLQKSLYFLFAFYAGNYQISEEQGVAESDYDYPKYLFKADFEA 70
Query: 65 WKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQL 124
W GPV VY + K + E + + N EI + ++ + + S L
Sbjct: 71 WTYGPVIRHVYDKNKKDEYMAKEFNFEGN-------ENSEISKFIDDVSEMIMAKSDFAL 123
Query: 125 QEIVQEENKTWRR--LYDPNDPNTNRTITVE 153
+ ++K W+ + P + I E
Sbjct: 124 VDRSH-DDKAWKDAIAIGNSSPMSEEVIANE 153
>gi|239617653|ref|YP_002940975.1| transcriptional regulator, XRE family [Kosmotoga olearia TBF
19.5.1]
gi|239506484|gb|ACR79971.1| transcriptional regulator, XRE family [Kosmotoga olearia TBF
19.5.1]
Length = 331
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 48/124 (38%), Gaps = 10/124 (8%)
Query: 23 IDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYF- 81
+ K + +D +K+ + ++ + ++ KS+ +A GP Y +
Sbjct: 188 VAKIMAVQKSLDMMKLLKLMFYVDAESFVKTGKSIFGLRYKANIYGP-TPYNYDIILGYL 246
Query: 82 -------DSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKT 134
D+ E +D K+ ++ I++S+ Y S+ +L E+ +E
Sbjct: 247 KKKGVISDNQDKEHFLDYREYKPAKVISKGESLIIDSVLKTYGKLSSRKLSELTHDEKC- 305
Query: 135 WRRL 138
W+
Sbjct: 306 WKET 309
>gi|209543109|ref|YP_002275338.1| hypothetical protein Gdia_0939 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209530786|gb|ACI50723.1| conserved hypothetical protein, putative phage associated protein
[Gluconacetobacter diazotrophicus PAl 5]
Length = 184
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 69/169 (40%), Gaps = 22/169 (13%)
Query: 13 YSTIAVANFFIDKGVK-YSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF 71
Y++ A +K + I+ LK + +Y++ + + + MLDE + GPV
Sbjct: 2 YNSAKAAQIIAYLALKTDARAINMLKAIKLVYISDREALKRFAVPMLDEPRASLPHGPVN 61
Query: 72 VGVYHRFKYF-------------DSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQS 118
Y K +H I V D+ ++++ E+ E+++S+W ++
Sbjct: 62 SWTYDNAKGEVEDANWSTILDDRANHMIGVKADIGVDDLDELSDAEV-EVLDSVWEEFGG 120
Query: 119 HSTEQLQEIVQEEN--KTWRRLYDPNDPNTNRTITVEEITKMADGSNIS 165
+ QL++ + + W DPN ++ I +E + N +
Sbjct: 121 MTQWQLRDWTHKSDNIPEWE---DPN--GSSNPIPLERLLHAVGIENTA 164
>gi|262273699|ref|ZP_06051512.1| hypothetical protein VHA_000674 [Grimontia hollisae CIP 101886]
gi|262222114|gb|EEY73426.1| hypothetical protein VHA_000674 [Grimontia hollisae CIP 101886]
Length = 97
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
+YHR+K + + I++ ++S E EI+ + + QL+E+ +E
Sbjct: 1 MYHRYKKYINGNIDLNKEISACDDLTT---EEKEIVAGAYKNFGKFDGWQLRELTHKEGS 57
Query: 134 TWRRLYDPN-DPNTNRTITVEEITK 157
W +++ + T + ++ +
Sbjct: 58 PWHKIWYDHCGNATYNAVMPNDVIR 82
>gi|319938025|ref|ZP_08012425.1| hypothetical protein HMPREF9488_03261 [Coprobacillus sp. 29_1]
gi|319806931|gb|EFW03570.1| hypothetical protein HMPREF9488_03261 [Coprobacillus sp. 29_1]
Length = 186
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 8 QTNPPYSTIAVANFFIDKGVKYSIP--IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAW 65
Y+ + +A + +D K + + LK+ + +Y+ + + + +E +
Sbjct: 1 MKEAKYTALELAYYMVDYTHKKQLECYLSPLKMSKLLYVAQGLSLAIYHQPLFKDEIKKC 60
Query: 66 KQGPVFVGVYHRF-KYFDSHPIEV 88
K G V F K + + I
Sbjct: 61 KYGVRIEEVDKAFLKSYGGNTIPS 84
>gi|153869441|ref|ZP_01999037.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152074071|gb|EDN70969.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 184
Score = 63.1 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 69/181 (38%), Gaps = 20/181 (11%)
Query: 15 TIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
+A + + K + ++K+ + +YL V + + M + + GPV
Sbjct: 7 VTQMAAYLL---KKRGNRMAYIKLIKLLYLAERKAVAKWGEPMSGDHFVSMPHGPVLSQT 63
Query: 75 YHRFKYFDSHP--------IEVIMDLSFRIFPKIAN-----QEIGEIMESIWNKYQSHST 121
Y K S I+ + + I + Q I++ ++ +Y + +
Sbjct: 64 YELIKSQPSPNEVSPWHDLIKDEENYEVSLSKDIEDFDELSQAEMRILDEVYAEYGTMNR 123
Query: 122 EQLQEIVQEENKTWRRLYDPNDPNTNRTI---TVEEITKMADGSNISPEN-VVEQIKKPV 177
Q+++ + + W YD P T +I + ++ S ++ E ++QIK +
Sbjct: 124 FQIRDFTHDYCQEWEDPYDSAFPITLESILRAMGRDEEQVKALSQLNQEQRYLDQIKATL 183
Query: 178 R 178
R
Sbjct: 184 R 184
>gi|325473753|gb|EGC76942.1| hypothetical protein HMPREF9353_02044 [Treponema denticola F0402]
Length = 186
Score = 63.1 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 56/150 (37%), Gaps = 15/150 (10%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+ I V N+ + KY +++ K+ + +YL + + A K GP+
Sbjct: 4 HKLIEVVNYML---KKYEYRLNYTKLLKMLYLADRQSYDDTGSPITGDTYTALKAGPILS 60
Query: 73 GVYHRFKYFDS------------HPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHS 120
Y+ + + + ++ L+ +I + E+++ I +K+ +++
Sbjct: 61 NTYNLIRNKGNQNDQNLWNSRFLKDVYDLVALTDKIPCNTLSDYEKEVLDGIDSKFHNYT 120
Query: 121 TEQLQEIVQEENKTWRRLYDPNDPNTNRTI 150
L E W+ D P + +I
Sbjct: 121 FTDLIEYTHANCPEWKAPKDSALPISIESI 150
>gi|169633419|ref|YP_001707155.1| hypothetical protein ABSDF1778 [Acinetobacter baumannii SDF]
gi|169152211|emb|CAP01115.1| conserved hypothetical protein [Acinetobacter baumannii]
Length = 185
Score = 63.1 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 46/121 (38%), Gaps = 16/121 (13%)
Query: 36 LKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR-------------FKY-- 80
+K+ + +Y + +S+ + AW+ GPV V +Y FK
Sbjct: 27 IKLFKLLYFLDFEHYKLTGRSVTGMDYFAWQMGPVPVELYDEISSPQPDMAEILSFKEIP 86
Query: 81 -FDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLY 139
+ + + ++ P + +IM + + Y+ + + E EN W ++Y
Sbjct: 87 VYQGNSTMLKVETKKEFDPSYFTKRELKIMHWLADSYKKELADDMIEATHLENLPWHQIY 146
Query: 140 D 140
+
Sbjct: 147 N 147
>gi|197294472|ref|YP_001799013.1| phage-associated protein [Candidatus Phytoplasma australiense]
gi|171853799|emb|CAM11735.1| Uncharacterized phage-associated protein [Candidatus Phytoplasma
australiense]
Length = 116
Score = 62.7 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 3/118 (2%)
Query: 6 FTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAW 65
+ VA + I + KIQ + + ++ M + + Q+W
Sbjct: 2 IIMQPNKIDILDVATYLIQHQNRNDYA--PFKIQNLAFWVYSKYLIDFNYPMFNNDFQSW 59
Query: 66 KQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQ 123
G V + +Y+ + P+ + I Q+ EIM+ I KY S Q
Sbjct: 60 PYGAVSLKLYNTLSR-EKTPLNPHHKIKKNYDENIFTQQEKEIMDYIIKKYGSKHAMQ 116
>gi|332882521|ref|ZP_08450139.1| conserved domain protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332679581|gb|EGJ52560.1| conserved domain protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 188
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 39/118 (33%), Gaps = 7/118 (5%)
Query: 33 IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDS---HPIEVI 89
+ K + +Y+ + Q L+ + + WK GPV ++ S I+
Sbjct: 31 LSKTKFLKLLYILDELSIKQSGIPFLNLDYKVWKFGPVAEPIFIDLSSEMSLLAPFIKSN 90
Query: 90 MDLSFRIFPKIANQEI----GEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPND 143
+ E E+++ + + + + ++L E W + N
Sbjct: 91 QKGHLSAKKAFKDDEFSDNDIELLDEVIKSFGNKTAKELVAYTHNEESLWNKTAKENK 148
>gi|319779083|ref|YP_004129996.1| putative phage associated protein [Taylorella equigenitalis MCE9]
gi|317109107|gb|ADU91853.1| putative phage associated protein [Taylorella equigenitalis MCE9]
Length = 162
Score = 62.0 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 55/151 (36%), Gaps = 24/151 (15%)
Query: 40 QFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR---FKYFDSHP----IEVIMDL 92
+ +YL + +L+ S+ ++ + GPV F+ +DS+ I +
Sbjct: 2 KLLYLAERESLLRYGTSITNDAFVSMPHGPVLSMTLDCINGFRTYDSNCWNTWIADREEN 61
Query: 93 SFRIFP----------KIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKT-WRRLYDP 141
+ + ++ E ++S+W +Y +S +L++I W
Sbjct: 62 HLVLAAPGMIRSTDDLRELSESDVEALDSVWKEYGYYSATKLRDITHSSFCPEWEDPKGY 121
Query: 142 NDPNTNRTITVEEITKMADGSNISPENVVEQ 172
+ P + + + G N S N + Q
Sbjct: 122 SKPISMKKLLTSI------GYNDSQANSIIQ 146
>gi|42527501|ref|NP_972599.1| hypothetical protein TDE1996 [Treponema denticola ATCC 35405]
gi|41818086|gb|AAS12510.1| hypothetical protein TDE_1996 [Treponema denticola ATCC 35405]
Length = 186
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 55/150 (36%), Gaps = 15/150 (10%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+ I V N+ + KY +++ K+ + +YL + + A K GP+
Sbjct: 4 HKLIEVVNYML---KKYEYRLNYTKLLKMLYLADRQSYDDTGSPITGDTYTALKAGPILS 60
Query: 73 GVYHRFKYFDSHPIEVIMDLSF------------RIFPKIANQEIGEIMESIWNKYQSHS 120
Y+ + + + + + F +I + E+++ I +K+ +++
Sbjct: 61 NTYNLIRNKGNQNDQNLWNSRFLKDAYDLVALTDKIPCNTLSDYEKEVLDGIDSKFHNYT 120
Query: 121 TEQLQEIVQEENKTWRRLYDPNDPNTNRTI 150
L E W+ D P + +I
Sbjct: 121 FTDLIEYTHANCPEWKAPKDSALPISIESI 150
>gi|153873025|ref|ZP_02001747.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152070509|gb|EDN68253.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 170
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 49/141 (34%), Gaps = 21/141 (14%)
Query: 37 KIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMD----- 91
+I + +Y + + + + + A K GPV Y K + D
Sbjct: 30 RISKIMYFADKEHLETYGRFVCGDHYVAMKHGPVPSCTYDILKAVRGNSFFESPDKKAFV 89
Query: 92 --LSFRIFPKIA------NQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPND 143
F + P A ++ E +++ +KY S +L E+ +E W+
Sbjct: 90 VVEQFLVKPLRATCVDYFSESDLECLDNAISKYGDLSFNELTELSHDE--AWQTA----- 142
Query: 144 PNTNRTITVEEITKMADGSNI 164
+ N I +E I +I
Sbjct: 143 -DENDYIDIEHIVATLANPDI 162
>gi|327409416|ref|YP_004301558.1| gp24 [Brochothrix phage BL3]
gi|296245492|gb|ADH03105.1| gp24 [Brochothrix phage BL3]
Length = 157
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 48/146 (32%), Gaps = 28/146 (19%)
Query: 33 IDHLKIQQFIYLTHCDVVLQKK-------------KSMLDEEPQAWKQGPVFVGVYHRFK 79
+ ++++Q+ +YL K + + +AW+ GPV +Y FK
Sbjct: 22 MTNIRLQKTMYLLFAFYGATFGSMEKDKELDEFYPKYLFEPSFEAWRYGPVDNEIYRDFK 81
Query: 80 Y--FDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRR 137
F P E + + ++ + + + + L + +++ WR
Sbjct: 82 SEVFSIAPFEPKTKEEINVL---------KFLDDLIVQTNAINDFGLVDRTHQDD-AWRE 131
Query: 138 LYDPND---PNTNRTITVEEITKMAD 160
Y + I E + K
Sbjct: 132 RYVEGEIHIKMDADEIIDEYLEKYVS 157
>gi|225155296|ref|ZP_03723789.1| hypothetical protein ObacDRAFT_8899 [Opitutaceae bacterium TAV2]
gi|224803903|gb|EEG22133.1| hypothetical protein ObacDRAFT_8899 [Opitutaceae bacterium TAV2]
Length = 200
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/159 (15%), Positives = 51/159 (32%), Gaps = 19/159 (11%)
Query: 20 NFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG------ 73
NFF + I+ LK + ++L + + + + +E A GPV G
Sbjct: 15 NFF---ARQSGGEINKLKALKLVFLADRYHLRRYGRPITGDEYLAMPYGPVASGAKDLAE 71
Query: 74 ----VYHRFKYFDSH---PIEVIMDLSF-RIFPKIANQEIGEIMESIWNKYQSHSTEQLQ 125
+ + + + P++ S ++ + ++ + W + +L
Sbjct: 72 MDSMMSDAERSYGAQYLAPVDRYSYRSIAKVEARTLSESDRLTLTWAWENFGKLKEFELA 131
Query: 126 EIVQEENKTWRRLYDPNDPNTNRTITVEEITKMADGSNI 164
E W+R +P T D S +
Sbjct: 132 EYTHR-YPEWKRHEEPLKSG-RETRIPMSYRDFLDDSTV 168
>gi|39938576|ref|NP_950342.1| uncharacterized phage-associated protein [Onion yellows
phytoplasma OY-M]
gi|39721685|dbj|BAD04175.1| uncharacterized phage-associated protein [Onion yellows
phytoplasma OY-M]
Length = 66
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 17 AVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGV 74
AN+ I K I ++H+K+Q+ +Y ++ + + K+S+ +AW++GPVF +
Sbjct: 14 DYANYIIKK-----IDVNHMKLQKLLYYSYAAYLFKYKESLSVNLVEAWQKGPVFKRL 66
>gi|148284157|ref|YP_001248247.1| hypothetical protein OTBS_0289 [Orientia tsutsugamushi str.
Boryong]
gi|146739596|emb|CAM79355.1| hypothetical protein OTBS_0289 [Orientia tsutsugamushi str.
Boryong]
Length = 79
Score = 60.0 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Query: 5 TFTQTNPPYSTIAVANFFIDKGVKY-SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEP 62
T Q S VA++F+ + I LK+Q+ +Y + K + E+
Sbjct: 2 TIQQKGELLSCFDVASYFLVLVDREAGDVITQLKLQRLVYFIQGVHLALFDKPLFKEDI 60
>gi|224024688|ref|ZP_03643054.1| hypothetical protein BACCOPRO_01416 [Bacteroides coprophilus DSM
18228]
gi|224017910|gb|EEF75922.1| hypothetical protein BACCOPRO_01416 [Bacteroides coprophilus DSM
18228]
Length = 255
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 35/107 (32%), Gaps = 18/107 (16%)
Query: 51 LQKKKSMLDEEPQAWKQGPVFVGVY-------HRFKYF-------DSHPIEVIMDLSFRI 96
L+ + + W+ GPV V+ + K F IE + D
Sbjct: 103 LKYHVPFIGIPFEVWQAGPVAKDVFVDLSDGPYLLKSFVKTDFKDGGTFIEAVADFDDSE 162
Query: 97 FPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPND 143
F + E+M+ I KY + + L +E W R+
Sbjct: 163 FSECE----IEMMDEILAKYGNMTASDLVAETHKEGTLWYRVAARTG 205
>gi|150006144|ref|YP_001300888.1| hypothetical protein BVU_3655 [Bacteroides vulgatus ATCC 8482]
gi|294775322|ref|ZP_06740845.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|149934568|gb|ABR41266.1| hypothetical protein BVU_3655 [Bacteroides vulgatus ATCC 8482]
gi|294450899|gb|EFG19376.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
Length = 196
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 49/148 (33%), Gaps = 26/148 (17%)
Query: 37 KIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVY-------HRFKYF-------D 82
K+ + +YL + L+ + + W+ GPV V+ + K F
Sbjct: 30 KLLKLLYLMEEHMALKYHVPFIGMPYEVWQAGPVAKDVFIDLSDVPYILKGFVRTEFRDG 89
Query: 83 SHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDP- 141
IE I D F K EIM+ + +Y + + L +++ W R
Sbjct: 90 GIFIEAIADFDDSEFSKCE----IEIMDYVLVRYGNMTASDLFLETCKKDSLWYRAAVRT 145
Query: 142 -------NDPNTNRTITVEEITKMADGS 162
N + + M+D S
Sbjct: 146 GLLETFNRQECNNSDLQINFAEVMSDSS 173
>gi|282891217|ref|ZP_06299720.1| hypothetical protein pah_c048o048 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498910|gb|EFB41226.1| hypothetical protein pah_c048o048 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 154
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 66/155 (42%), Gaps = 14/155 (9%)
Query: 1 MKKRTFTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDE 60
MKKR +Q P S + +A + + + PI K+ +Y ++ + +E
Sbjct: 1 MKKRRQSQ---PVSALDIAAYILAN-HTRNTPIAAWKMHILVYYCQVYQLISEGIPFFNE 56
Query: 61 EPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHS 120
+ A ++G + H + ++ + S + + + +I+ + KY + +
Sbjct: 57 KIMATQKGIMI----HELCALHYN--QLYIGDSSKGNLNHLSLKQIDIIGEVMKKYGNKT 110
Query: 121 TEQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEI 155
E+L +++Q E W++ T+ ++VE I
Sbjct: 111 LEELGQLIQLE-APWKKA---RQETTDLRVSVEII 141
>gi|294777884|ref|ZP_06743328.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|294448338|gb|EFG16894.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
Length = 159
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 32/102 (31%), Gaps = 18/102 (17%)
Query: 56 SMLDEEPQAWKQGPVFVGVY-------HRFKYF-------DSHPIEVIMDLSFRIFPKIA 101
+ + W+ GPV V+ K F IE + D F +
Sbjct: 12 PFIGIPFEVWQAGPVAKDVFIDLSDGPFLLKSFVKTDFRDGGTFIEAVADFDDSEFSECE 71
Query: 102 NQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPND 143
E+M+ + KY + + +L +E W R
Sbjct: 72 ----IEMMDEVLAKYGNMTASELVSETHKEGTLWYRTAARAG 109
>gi|167892263|ref|ZP_02479665.1| hypothetical protein Bpse7_00780 [Burkholderia pseudomallei 7894]
gi|167917020|ref|ZP_02504111.1| hypothetical protein BpseBC_00630 [Burkholderia pseudomallei
BCC215]
Length = 189
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 45/131 (34%), Gaps = 17/131 (12%)
Query: 36 LKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFK-------------YFD 82
+K+ + +Y + +S+ + AWK GPV +Y F
Sbjct: 27 VKLFKLLYFLDFEHFRDTGRSVTGMDYVAWKMGPVPEVLYSELSALDTAAGEWFGKVEFG 86
Query: 83 SHPIEVIMDLSFRIFPKIA----NQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRL 138
S + L R + ++ I+E + ++++ ++ E EN W ++
Sbjct: 87 SRETKNGPMLHIRPLGEFDPCFFSRRELRILERLATEFKNSDAAEMIEATHLENLPWNQV 146
Query: 139 YDPNDPNTNRT 149
Y R
Sbjct: 147 YVQEGKKRGRI 157
>gi|222086937|ref|YP_002545471.1| hypothetical protein Arad_3637 [Agrobacterium radiobacter K84]
gi|221724385|gb|ACM27541.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 190
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 63/164 (38%), Gaps = 24/164 (14%)
Query: 10 NPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGP 69
+P + +A FI K I+ LK + +YL + + + +LDE + GP
Sbjct: 4 DPKKAAQLIAR-FIQKS--GGNSINVLKAVKLVYLADRESIGRYGFPILDETRVSMPHGP 60
Query: 70 VFVGVYHRFK-YFD------SHPIEVIMD---------LSFRIFPKIANQEIGEIMESIW 113
V Y +D + +E L+ ++++ ++ E ++++W
Sbjct: 61 VNSTTYSHINGEYDLGACGWADYLEDKEHHQIALANTALTVDDLEELSDADL-ECVDAVW 119
Query: 114 NKYQSHSTEQLQEIVQEE-NKTWRRLYDPNDPNTNRTITVEEIT 156
++ + +L++ N ++ + +N + +T
Sbjct: 120 ERFGVMNQWELRDWTHNPKNIP---EWEDPNGASNPIPLIRIMT 160
>gi|90426161|ref|YP_534531.1| hypothetical protein RPC_4690 [Rhodopseudomonas palustris BisB18]
gi|90108175|gb|ABD90212.1| hypothetical protein RPC_4690 [Rhodopseudomonas palustris BisB18]
Length = 183
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 50/144 (34%), Gaps = 18/144 (12%)
Query: 20 NFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFK 79
N+F + + + +K+ + +Y + Q +++ AW GPV V +++
Sbjct: 15 NYF----ARNTKKLGKVKLFKLLYFLDFEHFKQTGRNVTGLTYFAWPMGPVPVSLHNEIV 70
Query: 80 Y----------FDSHPIEV----IMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQ 125
I +++ + + I+E + +Y+ + +
Sbjct: 71 QPKDDMTEALELGKRDISDGWMLVVNPKIPFSDRHFTKREIAILEHLAAEYRDADADSMI 130
Query: 126 EIVQEENKTWRRLYDPNDPNTNRT 149
E EN W ++Y+ +
Sbjct: 131 EATHLENLPWDQIYNKDGKKQQEI 154
>gi|189184312|ref|YP_001938097.1| hypothetical protein OTT_1405 [Orientia tsutsugamushi str. Ikeda]
gi|189181083|dbj|BAG40863.1| hypothetical protein OTT_1405 [Orientia tsutsugamushi str. Ikeda]
Length = 74
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Query: 5 TFTQTNPPYSTIAVANFFIDKGVKY-SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEP 62
T Q S VA++F+ + I LK+Q+ +Y + K + E+
Sbjct: 2 TIQQKGELLSRFDVASYFLVLVNREAGDVITQLKLQRLVYFIQGVHLALFDKPLFKEDI 60
>gi|167762949|ref|ZP_02435076.1| hypothetical protein BACSTE_01313 [Bacteroides stercoris ATCC
43183]
gi|167699289|gb|EDS15868.1| hypothetical protein BACSTE_01313 [Bacteroides stercoris ATCC
43183]
Length = 207
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 36/106 (33%), Gaps = 10/106 (9%)
Query: 48 DVVLQKKKSMLDEEPQAWKQGPVFVGVY-------HRFKYFDSHPIEVIMDLSFRIFPKI 100
+V + + + W+ GPV ++ K F ++ I P
Sbjct: 52 YMVKRYHVPFMGLPFEIWQAGPVAKDIFIDLSDGPFLLKDFVKTEVQKDATYIRAIKPFC 111
Query: 101 ANQEIG---EIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPND 143
++ E+M+ I KY + +QL V +E W +
Sbjct: 112 DDEFSDCEMEMMDEIIRKYGKKTAKQLVAEVHKEGSLWFNAAKKHG 157
>gi|167580346|ref|ZP_02373220.1| hypothetical protein BthaT_19487 [Burkholderia thailandensis TXDOH]
Length = 191
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/157 (13%), Positives = 51/157 (32%), Gaps = 20/157 (12%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
+ A + + + P++ +K+ + +YL + Q + + ++ Q ++ PV
Sbjct: 10 KAVDAAMYLLVRARA---PMNVVKLNRLLYLAERESFAQHAEPLTGDQLQVFETSPVLFA 66
Query: 74 VYHRF-----------------KYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKY 116
Y R + PI + + I++SIW K+
Sbjct: 67 TYQRLAGDVAGWEDRISYLANHEVEVRRPIMSETPEEYFDHSTRLSSADISILDSIWEKF 126
Query: 117 QSHSTEQLQEIVQEENKTWRRLYDPNDPNTNRTITVE 153
+ L + + W +++ + E
Sbjct: 127 GERNHYALTDYLHMSCHEWTDKQGNPTEVSHKRLLRE 163
>gi|332665668|ref|YP_004448456.1| hypothetical protein Halhy_3731 [Haliscomenobacter hydrossis DSM
1100]
gi|332334482|gb|AEE51583.1| hypothetical protein Halhy_3731 [Haliscomenobacter hydrossis DSM
1100]
Length = 190
Score = 58.1 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 46/136 (33%), Gaps = 19/136 (13%)
Query: 37 KIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFD-------SHPIEVI 89
KI + +Y + + + A GPV Y K S +
Sbjct: 31 KIFKILYFADQKHLATYGFPITGDYYIAMPHGPVPSKSYDVLKAIRGDSFWTASKEYSDL 90
Query: 90 MDLSFRI--------FPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDP 141
++ I ++A ++ ++E+I + + +QL + + W + +
Sbjct: 91 FEVEDHIVIAKQMPDMDELAESDVECLLEAIAEN-KDLTFQQLVDKSHK--SAWEKARND 147
Query: 142 NDPNTNRTITVEEITK 157
N + VE+I K
Sbjct: 148 ASNFDNE-MKVEDIAK 162
>gi|225868539|ref|YP_002744487.1| hypothetical protein SZO_09600 [Streptococcus equi subsp.
zooepidemicus]
gi|225701815|emb|CAW99247.1| conserved hypothetical protein [Streptococcus equi subsp.
zooepidemicus]
Length = 170
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 40/130 (30%), Gaps = 17/130 (13%)
Query: 34 DHLKIQQFIYLTHCDVVLQKKK----------------SMLDEEPQAWKQGPVFVGVYHR 77
+KIQ+ +YL K + + +AW GPV VY R
Sbjct: 24 SPIKIQKTLYLLFAYYGATYGKINLSNDSELDISNYTEFLFEPNFEAWMYGPVDFEVYER 83
Query: 78 FKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRR 137
K + ++ + Q I ++I + L + E+ W
Sbjct: 84 NKNGEYSAQKLSFESLNNELNLSEKQNIVNFSDNIIRQTNVADDFSLVDRTHEDES-WSI 142
Query: 138 LYDPNDPNTN 147
Y+ + +
Sbjct: 143 PYEKGNGAAH 152
>gi|153869471|ref|ZP_01999063.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152074039|gb|EDN70940.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 187
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 22/171 (12%)
Query: 17 AVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYH 76
+A +F DK I HL + + +Y+ + + S+ D+ + GPV
Sbjct: 14 QLAAYFTDK---NGGEIYHLTLMKLLYIADRNALATLGYSISDDNYVSMDYGPVLSKTSS 70
Query: 77 RFKYFDSHP-------IEVIMDLSFRIFPK------IANQEIGEIMESIWNKYQSHSTEQ 123
+ I D + + +Q EI +S++ +Y +
Sbjct: 71 LINGSERAENSLWIKLISPSKDYKVSLLNPKNVPTDLLSQAELEIADSVFAQYGNWDRFD 130
Query: 124 LQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKMADGSNISPENVVEQIK 174
L + E W+ DPN I+ E+I S N++++++
Sbjct: 131 LADKTH-EFSEWK---DPNGSAI--PISYEDILMALGFSKEDVNNILQELE 175
>gi|167856603|ref|ZP_02479304.1| hypothetical protein HPS_05935 [Haemophilus parasuis 29755]
gi|167852269|gb|EDS23582.1| hypothetical protein HPS_05935 [Haemophilus parasuis 29755]
Length = 191
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 72/195 (36%), Gaps = 38/195 (19%)
Query: 21 FFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF--------- 71
+ + K + H+K+ + +YL+ L++ S+ +E + GPV
Sbjct: 13 YLLHKA---GGTMHHIKLMKLLYLSDRLSWLERDHSITGDEYYSLPYGPVLSKTLNLIRG 69
Query: 72 ------VGVYHRF---KYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTE 122
+ + K I I+D F + +I++S++ KY
Sbjct: 70 ETLNHTKTAWEEWISDKENHQVSIAKIVDEKDEYFWGELSLSDTDILDSVFEKYGHFDRF 129
Query: 123 QLQEIVQEEN--KTWRRLYDPNDPNTNRTITVEEITKMADGSNISPENVVEQIKKPVRFD 180
L E+ + W DP + IT+E++ + S EQIK F+
Sbjct: 130 ALVELTHNPDIVPEWE---DPKGGA--KKITLEKLLQHLGKSK-------EQIK--AIFE 175
Query: 181 SDSEFATLESQLVKG 195
+E + ++L KG
Sbjct: 176 EQAEMQQI-NRLFKG 189
>gi|150006143|ref|YP_001300887.1| phage-like protein [Bacteroides vulgatus ATCC 8482]
gi|294775321|ref|ZP_06740844.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|149934567|gb|ABR41265.1| conserved hypothetical phage-like protein [Bacteroides vulgatus
ATCC 8482]
gi|294450898|gb|EFG19375.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
Length = 185
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 17/136 (12%)
Query: 37 KIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDL---- 92
K+ + +Y D +++ K ++++ A K GP +Y + P E +
Sbjct: 29 KLFRILYFAQQDYLVKYGKVLIEDSFMALKYGPAPTYIYRVLQAVKEKPTEESFNDFLAG 88
Query: 93 ----------SFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDP- 141
S + + +++ KY+ L ++ + W+
Sbjct: 89 IEVHEQKIYASAKPDMNYISGSDKRCLDAAITKYKDTDPYDLSDLSH--DLAWKEARARI 146
Query: 142 NDPNTNRTITVEEITK 157
D IT+ +I +
Sbjct: 147 KDNPQKNLITIIDIAR 162
>gi|296393155|ref|YP_003658039.1| hypothetical protein Srot_0728 [Segniliparus rotundus DSM 44985]
gi|296180302|gb|ADG97208.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985]
Length = 59
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWK 66
S + VA ID+ ++ K+ +Y ++ + E+ QAW
Sbjct: 3 SAVDVAQHIIDR---LGGEVEPEKLHCLLYYCQAWHLVAHGTPLFPEQMQAWP 52
>gi|148548607|ref|YP_001268709.1| hypothetical protein Pput_3399 [Pseudomonas putida F1]
gi|148512665|gb|ABQ79525.1| hypothetical protein Pput_3399 [Pseudomonas putida F1]
Length = 191
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 64/187 (34%), Gaps = 30/187 (16%)
Query: 17 AVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYH 76
+A FF+ + + LK+ + +YL + ++ + + + GPV Y
Sbjct: 10 QMAAFFLQR---NGGSLSILKLMKLLYLADRKALDVYEEPISGDRMVSMPHGPVLSRTYE 66
Query: 77 RFKYFD-----------SHPIEVIMDLSFR-------IFPKIANQEIGEIMESIWNKYQS 118
+ + ++ L P ++ ++ E++ +Y
Sbjct: 67 LMNGAGCSVDKGWDSWVADRADRMLSLKECHISSNDLDLPALSESDL-EVLSETQAEYGD 125
Query: 119 HSTEQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKMADGSNISPENVVEQIKKPVR 178
L+ ++ W DPN ++R I+ E + + PE+ ++
Sbjct: 126 KEAWVLRNYTHDKCAEWE---DPN--GSSRPISYESVFRALGR---DPESAKSAQQRIES 177
Query: 179 FDSDSEF 185
F+S E
Sbjct: 178 FNSTDEL 184
>gi|85717694|ref|ZP_01048630.1| hypothetical protein NB311A_08764 [Nitrobacter sp. Nb-311A]
gi|85695491|gb|EAQ33413.1| hypothetical protein NB311A_08764 [Nitrobacter sp. Nb-311A]
Length = 190
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 63/173 (36%), Gaps = 24/173 (13%)
Query: 8 QTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQ 67
+ P + + I K + + I LK + +YL + + + +LDE+ +
Sbjct: 1 MSYEPKRAAQLIAYLILKSGRGKLNI--LKAIKLVYLIDRESIKRFGFPVLDEKRCSMPH 58
Query: 68 GPVFVGVYHRFKY-FDSHP------IEVIMDLSFRIFPK--------IANQEIGEIMESI 112
GPV Y +D + + + + + ++ E +++
Sbjct: 59 GPVNSMTYDHINGVYDDDESGWSAILTDRENHNIALANREIRPDELDELSEADIECADAV 118
Query: 113 WNKYQSHSTEQLQEIVQEE-NKT-WRRLYDPNDPNTNRTITVEEITKMADGSN 163
W ++ + QL++ + N W DPN +T I ++ I +N
Sbjct: 119 WGQFGHMTKWQLRDWTHDPRNVPEWE---DPNGGST--EIPLQRILHAVGVAN 166
>gi|254472489|ref|ZP_05085889.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211958772|gb|EEA93972.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 108
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 81 FDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYD 140
F E++ ++ +I + EI++ +W KY++++ +QL ++ + N W Y
Sbjct: 6 FKGPNSEIVDPITGQIITSKISGNEEEILDHVWKKYRNYTPQQLSDLTHQANSPWAYAYF 65
Query: 141 PNDPNTNRTITVE 153
+ N I E
Sbjct: 66 --EKGRNAEIDTE 76
>gi|302380318|ref|ZP_07268789.1| hypothetical protein HMPREF9261_0099 [Finegoldia magna
ACS-171-V-Col3]
gi|302311923|gb|EFK93933.1| hypothetical protein HMPREF9261_0099 [Finegoldia magna
ACS-171-V-Col3]
Length = 203
Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 77/188 (40%), Gaps = 30/188 (15%)
Query: 14 STIAVANFFIDKG---VKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV 70
I +A +F+ K +K I +H K+ + ++ + K+ ++D++ + ++ PV
Sbjct: 2 KAIEIAKWFLYKNPSLLKGGIDENH-KLNTLLCFSNLMYLSVYKEKLIDDKFEKFEGYPV 60
Query: 71 FVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQE 130
Y+ ++Y + S P I +++I +++E Y S L E
Sbjct: 61 VKSAYNEYQY-------NNLCESVDENPTILDEKILQVLEINNFVYSDFS---LSEF--- 107
Query: 131 ENKTWRRLYDPNDPNTN-RTITVEEITKMADGSNISPENVVEQIKKPVRFDSDSEFATLE 189
ND N +T+ E D NI P+++ E + D +F +
Sbjct: 108 -----------NDMCNNLNILTLVEKESTIDYKNI-PQDLKEFMVNLYNLYKDYDFDNIG 155
Query: 190 SQLVKGFK 197
+++V G K
Sbjct: 156 TEIVNGNK 163
>gi|284005926|ref|YP_003391744.1| hypothetical protein Slin_7002 [Spirosoma linguale DSM 74]
gi|283821110|gb|ADB42945.1| hypothetical protein Slin_7002 [Spirosoma linguale DSM 74]
Length = 188
Score = 55.4 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 19/147 (12%), Positives = 53/147 (36%), Gaps = 16/147 (10%)
Query: 34 DHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSH-----PIEV 88
K+ + +Y+ + + Q + +GPV + ++ I+
Sbjct: 26 SKTKLLKLVYIIEEEYIKQAGVPLTPLSFTHLPKGPVSTFINNQINKNREPLNRYVRIDK 85
Query: 89 IMDLSF-RIFPKIANQEIGEI----MESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPND 143
+ D + R ++ E E + + ++ ++ + L + E W+++ D
Sbjct: 86 VNDQCWIRPIVDFSDDEFSEFDLQVINEVLERFGRYNADALIDYTHREGSIWKQMQDEFG 145
Query: 144 ---PNTNRTITVEEITKMADGSNISPE 167
P T+ + ++ D ++ P+
Sbjct: 146 GPPPAKQNTL---NLFRLLDSEDVDPD 169
>gi|126659195|ref|ZP_01730333.1| hypothetical protein CY0110_04448 [Cyanothece sp. CCY0110]
gi|126619500|gb|EAZ90231.1| hypothetical protein CY0110_04448 [Cyanothece sp. CCY0110]
Length = 186
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 64/170 (37%), Gaps = 29/170 (17%)
Query: 29 YSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFK--------- 79
+ P+ +L + + +Y+ + Q ++ + + + K GPV VY K
Sbjct: 23 HGKPMKYLGLLKMLYIADRMALEQIEEPITGDHYFSMKYGPVLSKVYDLIKGQLVDHTLP 82
Query: 80 --------YFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
++ H + + D + +E EI++ ++ K+ + E
Sbjct: 83 LWSEFISPRYNKHYVYLKKDPG----NEELCEEEEEIIKKVYKKFGHLDPFTVAEWTH-- 136
Query: 132 NKTWRRLYDPNDPNTNRT-ITVEEITKMADGSNISPENVVEQIKKPVRFD 180
L + DP +R IT+EEI K ++ E + ++ + D
Sbjct: 137 -----DLKEWQDPGNSRIPITIEEILKYLGKTDEEIEEIRQEAAREYYLD 181
>gi|219870976|ref|YP_002475351.1| putative phage associated protein [Haemophilus parasuis SH0165]
gi|219691180|gb|ACL32403.1| putative phage associated protein [Haemophilus parasuis SH0165]
Length = 170
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 68/181 (37%), Gaps = 35/181 (19%)
Query: 35 HLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVF---------------VGVYHRF- 78
H+K+ + +YL+ L++ S+ +E + GPV + +
Sbjct: 3 HIKLMKLLYLSDRLSWLERDHSITGDEYYSLPYGPVLSKTLNLIRGETLNHTKTAWEEWI 62
Query: 79 --KYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN--KT 134
K I I+D F + +I++S++ KY L E+ +
Sbjct: 63 SDKENHQVSIAKIVDEKDEYFWGELSLSDTDILDSVFEKYGHFDRFALVELTHNPDIVPE 122
Query: 135 WRRLYDPNDPNTNRTITVEEITKMADGSNISPENVVEQIKKPVRFDSDSEFATLESQLVK 194
W DP + IT+E++ + S EQIK F+ +E + ++L K
Sbjct: 123 WE---DPKGGA--KKITLEKLLQHLGKSK-------EQIK--AIFEEQAEMQQI-NRLFK 167
Query: 195 G 195
G
Sbjct: 168 G 168
>gi|78067174|ref|YP_369943.1| hypothetical protein Bcep18194_A5705 [Burkholderia sp. 383]
gi|77967919|gb|ABB09299.1| hypothetical protein Bcep18194_A5705 [Burkholderia sp. 383]
Length = 225
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 51/139 (36%), Gaps = 20/139 (14%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
A + + + P++ K+ + +YL + + + + ++ +++ PV G
Sbjct: 44 KAADAAMYLLVRARA---PVNGAKLNRLLYLAERESFARYGEPLTGDQLLVFEKSPVLYG 100
Query: 74 VY-----------HRFKYFDSH------PIEVIMDLSFRIFPKIANQEIGEIMESIWNKY 116
Y R + +H PI ++ + +++++W+++
Sbjct: 101 TYQRLAGDVPGWEDRIENLANHELRVRVPIFAEEPEAYFDHSTQLSDADIAVLDAVWDEF 160
Query: 117 QSHSTEQLQEIVQEENKTW 135
+ L + + + + W
Sbjct: 161 GGMTHWALADYIHSKCREW 179
>gi|255533041|ref|YP_003093413.1| hypothetical protein Phep_3156 [Pedobacter heparinus DSM 2366]
gi|255346025|gb|ACU05351.1| conserved hypothetical protein [Pedobacter heparinus DSM 2366]
Length = 186
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 50/151 (33%), Gaps = 30/151 (19%)
Query: 37 KIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKY---------------- 80
KI + +Y + + + + QA GPV +Y FK
Sbjct: 29 KIFKILYFAEQQHLKNYGQPLTGDVYQAMPYGPVPSFLYDVFKASENQASPFSEALELSK 88
Query: 81 ----FDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWR 136
I + ++A I IM SI Y + + +++ + + W
Sbjct: 89 AFTVSRKDKIPYVSPTREADIDQLAETNIEAIMASIEENY-ALTFKEITDKSH--DSAWA 145
Query: 137 RLYDPNDPNTNRTITVEEITKMADGSNISPE 167
+ + T ++ +I A+ + SPE
Sbjct: 146 KA----EQATETEMSYLDI---AESAEASPE 169
>gi|153806929|ref|ZP_01959597.1| hypothetical protein BACCAC_01205 [Bacteroides caccae ATCC 43185]
gi|149131606|gb|EDM22812.1| hypothetical protein BACCAC_01205 [Bacteroides caccae ATCC 43185]
Length = 175
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 60/152 (39%), Gaps = 18/152 (11%)
Query: 38 IQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIF 97
+ + +Y + ++ + M+ ++ A GPV +Y + S ++ D+ +
Sbjct: 28 LFKILYFANQRSLVDWGQLMIADKFCALPHGPVPTILYSTIQGQKSVLSKMKDDVYVVDY 87
Query: 98 PKIA---------NQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPNDPNTNR 148
++ +Q + ++ +KY S ++L+ W++ D N
Sbjct: 88 YLLSKREPDMDYLSQYDKDTLDLCISKYGKMSFKELERTSH--TTCWQKARDKKG---NH 142
Query: 149 TITVEEITKMADGSNISPENVVEQIKKPVRFD 180
I +I + G+N + +V+ I + FD
Sbjct: 143 VIDPGDIA-LDGGAN---DELVKYINDSIAFD 170
>gi|15838698|ref|NP_299386.1| hypothetical protein XF2107 [Xylella fastidiosa 9a5c]
gi|9107235|gb|AAF84906.1|AE004026_7 hypothetical protein XF_2107 [Xylella fastidiosa 9a5c]
Length = 70
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 55 KSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIA--NQEIGEIMESI 112
++DE +AW+ GPV +Y+ K S I + + + + + + + I+ S+
Sbjct: 11 HPLIDELVEAWRAGPVIRSMYNAIKQDGSSGITERLPVRWFSWGRASKIDATAAAILASV 70
>gi|184154580|ref|YP_001842920.1| hypothetical protein LAF_0104 [Lactobacillus fermentum IFO 3956]
gi|183225924|dbj|BAG26440.1| hypothetical protein [Lactobacillus fermentum IFO 3956]
gi|299782756|gb|ADJ40754.1| Putative uncharacterized protein [Lactobacillus fermentum CECT
5716]
Length = 241
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 55/153 (35%), Gaps = 16/153 (10%)
Query: 14 STIAVANFFIDKGVKYSIPIDH-LKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+T VA + I K Y + + IQ+ +Y + D + + + + + + A+ +GPV
Sbjct: 91 TTTEVAAYMIHK---YHLSLHQRYAIQKTLYYLYADHLATEGR-LFEGQFVAYDRGPVDS 146
Query: 73 GVYHRFKYFDSHPIE-VIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQ-LQ----- 125
+ + D I+ +I ++ ++ +KY ++ L
Sbjct: 147 KLLN-LMVHDPKRIDRSRFLFHEKIGVGQKRTQVLTAIDEAVDKYLPFFEQEPLVSDPAA 205
Query: 126 EIVQEENKTWRRLYDPNDPNTNRTITVEEITKM 158
W+R Y N I + I +
Sbjct: 206 NPTHRPGTPWQRAY---QQGQNTVIDDDLIRRY 235
>gi|308235803|ref|ZP_07666540.1| toxin-antitoxin system, antitoxin component, Xre domain protein
[Gardnerella vaginalis ATCC 14018]
gi|311114464|ref|YP_003985685.1| hypothetical protein HMPREF0421_20580 [Gardnerella vaginalis ATCC
14019]
gi|310945958|gb|ADP38662.1| hypothetical protein HMPREF0421_20580 [Gardnerella vaginalis ATCC
14019]
Length = 248
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/225 (17%), Positives = 75/225 (33%), Gaps = 37/225 (16%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV------- 70
VA + + K +I ++Q Y + + QAW+ GPV
Sbjct: 7 VAYAILKRYGKMNIN----RLQLLSYYCQAYNLASTNSPLFYNNFQAWRNGPVCLDLFKM 62
Query: 71 --FVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIV 128
V+ K P E+ L++ I + +++ + S E+L+
Sbjct: 63 HRINDVFIECKDIVLGPYELKNHLTYSNLLT-----IYNVCDALID----FSIEELENRA 113
Query: 129 QEENKTWRRLYDPNDPNTNRTITVEEITKMADGSNISPENVVEQ--IKKPVRFDSDSEFA 186
+ E W R I + ++ I + V+ I R EF
Sbjct: 114 RSE-MPWIDA--------RRGILPNKANEVEISKKIIHDYYVKHPVINTNSRTTRSKEFR 164
Query: 187 TLESQLVKGFKSMPPQLTKEFQEAQVQIKKDSAIARSIQESNIMR 231
+ +L K + + + ++F Q +D + R + I+R
Sbjct: 165 KDDEELQKDIQDIISEQIEKFN----QYNQDEKVRRIRRAEKILR 205
>gi|261496397|ref|ZP_05992789.1| hypothetical protein COI_2127 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261307944|gb|EEY09255.1| hypothetical protein COI_2127 [Mannheimia haemolytica serotype A2
str. OVINE]
Length = 195
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/163 (12%), Positives = 55/163 (33%), Gaps = 22/163 (13%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+ + +A K ++H+K+ + +YL + S+ ++E + GPV
Sbjct: 2 FDELKIAQATAYLLHKAGGTMEHIKVMKLLYLADRLSWQRYGYSISNDEYYSLPYGPVLS 61
Query: 73 -----------GVYHRFKYFD---SHPIEVIMDLSFRIFPKIA------NQEIGEIMESI 112
+Y + + + + + L + + ++ EI+E +
Sbjct: 62 NTLNLMRGEEASLYQKTSIWGEWIADKEDHKISLKKSVNTEDEYFFDCLSESDTEILEEV 121
Query: 113 WNKYQSHSTEQLQEIVQEEN--KTWRRLYDPNDPNTNRTITVE 153
+ + ++ L E W + P + T+ +
Sbjct: 122 FATFGNYKPFALVEYTHNPKYIPEWEDPQGRSKPISLNTLLTK 164
>gi|261493154|ref|ZP_05989688.1| hypothetical protein COK_1566 [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261311185|gb|EEY12354.1| hypothetical protein COK_1566 [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 195
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/163 (12%), Positives = 55/163 (33%), Gaps = 22/163 (13%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+ + +A K ++H+K+ + +YL + S+ ++E + GPV
Sbjct: 2 FDELKIAQATAYLLHKAGGTMEHIKVMKLLYLADRLSWQRYGYSISNDEYYSLPYGPVLS 61
Query: 73 -----------GVYHRFKYFD---SHPIEVIMDLSFRIFPKIA------NQEIGEIMESI 112
+Y + + + + + L + + ++ EI+E +
Sbjct: 62 NTLNLMRGEEASLYQKTSIWGEWIADKEDHKISLKKSVNTEDEYFFDCLSESDTEILEEV 121
Query: 113 WNKYQSHSTEQLQEIVQEEN--KTWRRLYDPNDPNTNRTITVE 153
+ + ++ L E W + P + T+ +
Sbjct: 122 FATFGNYKPFALVEYTHIPKYIPEWEDPQGRSKPISLNTLLTK 164
>gi|270293719|ref|ZP_06199921.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270275186|gb|EFA21046.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 185
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/169 (14%), Positives = 61/169 (36%), Gaps = 23/169 (13%)
Query: 22 FIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYF 81
+I + + K+ + +Y D +++ K ++++ A K GPV +Y +
Sbjct: 16 YIMQSFPQGVEYT--KLFEILYFAQQDYLVKYGKVLIEDSFMALKYGPVPTYIYKALQTA 73
Query: 82 DSHPI-----EVIMDLSFRIFPKIANQE---------IGEIMESIWNKYQSHSTEQLQEI 127
P + + + A+ + +++ KY+ ++
Sbjct: 74 GRKPTEEGFNDFLTGIEVHEKKIYASAKPDMDYISGSDKRCLDAAITKYRDTDPYDQSDL 133
Query: 128 VQEENKTWRRLYDP-NDPNTNRTITVEEITKMADGSNISPENVVEQIKK 175
+ W+ D +T+ +I + A +N + +V+ I+K
Sbjct: 134 S--NDSAWKEFMTRIKDDPQKNLLTIMDIAR-AGKAN---KEMVDYIRK 176
>gi|319776179|ref|YP_004138667.1| hypothetical protein HICON_15300 [Haemophilus influenzae F3047]
gi|329123359|ref|ZP_08251924.1| hypothetical protein HMPREF9095_1142 [Haemophilus aegyptius ATCC
11116]
gi|317450770|emb|CBY86991.1| Putative uncharacterised protein [Haemophilus influenzae F3047]
gi|327471359|gb|EGF16811.1| hypothetical protein HMPREF9095_1142 [Haemophilus aegyptius ATCC
11116]
Length = 194
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 44/136 (32%), Gaps = 25/136 (18%)
Query: 19 ANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYH-- 76
A + + K + HLK+ + +YL ++ ++ +E + GPV
Sbjct: 11 AAYLL---YKSGGSMKHLKLMKLLYLADRLSWQERDYAITGDEYYSLPYGPVLSKTLDLM 67
Query: 77 ---RFKYFDSHP-------IEVIMDLSFRIFPKIANQE----------IGEIMESIWNKY 116
F +S I + ++ K+ + EI+ I NK+
Sbjct: 68 HGETFNQLNSANANVWDKWIADDANYCVKLAKKVDETDEYFWDCLSVSDEEILNQILNKF 127
Query: 117 QSHSTEQLQEIVQEEN 132
L E +N
Sbjct: 128 GHFEPFALVEYTHNKN 143
>gi|113460682|ref|YP_718748.1| hypothetical protein HS_0537 [Haemophilus somnus 129PT]
gi|112822725|gb|ABI24814.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 195
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/191 (15%), Positives = 66/191 (34%), Gaps = 27/191 (14%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
++ + VA K ++H+K + +YL + S+ ++E + GPV
Sbjct: 2 FNELKVAQATAYLLHKAGGTMEHIKAMKLLYLADRLSWQKYNYSISNDEYYSLPYGPVLS 61
Query: 73 GVYHRFKY-----FDSHPI---------------EVIMDLSFRIFPKIANQEIGEIMESI 112
+ + + ++ I + +D + F ++ EI++ I
Sbjct: 62 NTLNLMRGEEASLYQNNSIWGEWIADKEDHKISLKRTVDTADEYFFDCLSESDTEILDEI 121
Query: 113 WNKYQSHSTEQLQEIVQEEN--KTWRRLYDPNDPNTNRTITVEEITKMADGSNISPENVV 170
+ + S+ L E W + P I + + + +++
Sbjct: 122 FATFGSYKPFALVEYTHNPKYIPEWENPQGRSKP-----IYLATLLSNLGKTEREIADIL 176
Query: 171 EQIKKPVRFDS 181
EQI++ DS
Sbjct: 177 EQIEEKKTMDS 187
>gi|163785376|ref|ZP_02180004.1| hypothetical protein HG1285_11927 [Hydrogenivirga sp. 128-5-R1-1]
gi|159879354|gb|EDP73230.1| hypothetical protein HG1285_11927 [Hydrogenivirga sp. 128-5-R1-1]
Length = 190
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/167 (11%), Positives = 56/167 (33%), Gaps = 28/167 (16%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
Y+ +AN I + + K+ + I+ + + + + + E GPV +
Sbjct: 4 YNIEKIANAIILALDEGVNFLGKTKLMKLIFFADKEHIKRYGRPIFFEFYVKDNMGPVPL 63
Query: 73 GVYHRFKYFDSHPIEVIMD--LSFRIFPKIANQEI------------------------G 106
Y + E D S + ++ +++
Sbjct: 64 KTYSILSSVNDLENEDFKDEVESLLQWLEVEEKDVNRKFPMLTFKKKKEFDQSVFSKSEI 123
Query: 107 EIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPNDPNTNRTITVE 153
E+++ ++ K++ ++ +Q+ E + + + T + + E
Sbjct: 124 EVLKDVFKKFKDYTAQQISEYSHK--LPEYKNKLYWEEITYKDMAEE 168
>gi|57505935|ref|ZP_00371859.1| conserved hypothetical protein [Campylobacter upsaliensis RM3195]
gi|57015735|gb|EAL52525.1| conserved hypothetical protein [Campylobacter upsaliensis RM3195]
Length = 56
Score = 52.3 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 14 STIAVANFFIDK----GVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQA 64
++AN F++K V+ + I +K+Q+ ++L + + + +K + E+ +A
Sbjct: 2 KAQSIANAFLNKVPIEAVENNEGIHKIKLQKLLFLAQKEYLFRYEKPLFKEKIEA 56
>gi|254363026|ref|ZP_04979087.1| hypothetical protein MHA_2612 [Mannheimia haemolytica PHL213]
gi|153094688|gb|EDN75483.1| hypothetical protein MHA_2612 [Mannheimia haemolytica PHL213]
Length = 195
Score = 52.3 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/163 (12%), Positives = 55/163 (33%), Gaps = 22/163 (13%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
+ + +A K ++H+K+ + +YL + S+ ++E + GPV
Sbjct: 2 FDELKIAQATAYLLHKAGGTMEHIKVMKLLYLADRLSWQRYGYSISNDEYYSLPYGPVLS 61
Query: 73 -----------GVYHRFKYFD---SHPIEVIMDLSFRIFPKIA------NQEIGEIMESI 112
+Y + + + + + L + + ++ EI+E +
Sbjct: 62 NTLNLMRGEEASLYQKTSIWGEWIADKEDHKISLKKSVNTEDEYFFDCLSESDTEILEEV 121
Query: 113 WNKYQSHSTEQLQEIVQEEN--KTWRRLYDPNDPNTNRTITVE 153
+ + ++ L E W + P + T+ +
Sbjct: 122 FATFGNYKPFALVEYTHNPKYIPEWEDPQGRSKPISLSTLLTK 164
>gi|48697279|ref|YP_025046.1| hypothetical protein phiAT3gORF19 [Lactobacillus phage phiAT3]
gi|47607170|gb|AAT36506.1| unknown [Lactobacillus phage phiAT3]
Length = 166
Score = 52.3 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 41/137 (29%), Gaps = 21/137 (15%)
Query: 37 KIQQFIYLTHCDVVLQKK----------------KSMLDEEPQAWKQGPVFVGVYHRFKY 80
K+Q+ +Y ++ E +AWK GPV VY + K
Sbjct: 28 KVQKSLYFLWAYYSGTYGNVDKSEETDFGQTNYPANLFKPEFEAWKYGPVDDKVYAKQK- 86
Query: 81 FDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYD 140
+ + E+ + + ++ + L E+ W + +
Sbjct: 87 ---NGFYLKDKWKEYQPKNSEEVEVVSFINDLLSQINKVNDFGLVNRSHEDES-WSKPFK 142
Query: 141 PNDPNTNRTITVEEITK 157
+ + +EI K
Sbjct: 143 RAHGEPHAHMDPDEIRK 159
>gi|296393069|ref|YP_003657953.1| hypothetical protein Srot_0640 [Segniliparus rotundus DSM 44985]
gi|296180216|gb|ADG97122.1| hypothetical protein Srot_0640 [Segniliparus rotundus DSM 44985]
Length = 59
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWK 66
S + VA I++ ++ K+ +Y ++ + E+ Q W
Sbjct: 3 SVVDVAQHIIER---LGGEVEPEKLHCLLYYCQAWHLVAHGTPLFPEQMQVWP 52
>gi|313205461|ref|YP_004044118.1| helix-turN-helix domain protein [Paludibacter propionicigenes WB4]
gi|312444777|gb|ADQ81133.1| helix-turn-helix domain protein [Paludibacter propionicigenes WB4]
Length = 266
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 41/128 (32%), Gaps = 16/128 (12%)
Query: 21 FFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV---FVGVYHR 77
+ ++K + + + +Y + + ++ + + + GPV + H+
Sbjct: 109 YILEKC-AGKPNVGETVLYKLLYFSDFNYYELYEEHLTGAKYRKLPYGPVPQKLESIIHQ 167
Query: 78 ---------FKY-FDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEI 127
FK + P + L + E EI++ + + S +
Sbjct: 168 MIEQDKIKRFKSEYHGFPQTRYIPLVKADLTNLKASE-KEIIDRVIEQMSDWSASAISNY 226
Query: 128 VQEENKTW 135
++ W
Sbjct: 227 SH-KDMPW 233
>gi|251773332|gb|EES53881.1| conserved hypothetical protein [Leptospirillum ferrodiazotrophum]
Length = 165
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 68/159 (42%), Gaps = 25/159 (15%)
Query: 35 HLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR----------------F 78
HLK+ + +YL+ + + + + + P + GPV +
Sbjct: 3 HLKLMKLLYLSDRESIQETGLPISWDLPVSMPHGPVLSLTLNLMNGDWGSDTTDGWASWI 62
Query: 79 KYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRL 138
+++ + ++ +S + K+++ ++ +++ES+W ++ L++ + W+
Sbjct: 63 SGKENYEVGLVRPVSRKALDKLSDFDL-DVLESVWARFGEMDQWSLRDWTHDHCAEWQ-- 119
Query: 139 YDPNDPNTNRTITVEEITKMADGSNISPE--NVVEQIKK 175
+ ++R I EI + A G N E N++ I++
Sbjct: 120 ---DPDGSSRPIAPGEILR-AVGYNDDNEIKNIIRIIEE 154
>gi|281420931|ref|ZP_06251930.1| conserved hypothetical protein [Prevotella copri DSM 18205]
gi|281405223|gb|EFB35903.1| conserved hypothetical protein [Prevotella copri DSM 18205]
Length = 225
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 53/165 (32%), Gaps = 27/165 (16%)
Query: 22 FIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYH----- 76
+I K + H + + +Y D++ + ++ + A K GPV Y
Sbjct: 44 YILKAFPEGVDYIH--LFKVMYFAQQDLLKEYGLPIMYDTFVARKHGPVPALTYKVLRGI 101
Query: 77 ---------RFKYFDSH-PIEVIMDLSFRIFPKIANQ--------EIGEIMESIWNKYQS 118
K F I + D + + ++++ K +
Sbjct: 102 EGKADLSTPELKDFADSLNIAISQDGHQLVLASKNAECDMDELSVADVKMLDKWIEKCKD 161
Query: 119 HSTEQLQEIVQEENKTWRRLYDPNDP-NTNRTITVEEITKMADGS 162
+ L + E++ W+R D + IT+ ++ A S
Sbjct: 162 VESFDLSDKSH-EDRAWKRAKRQADKTGEDSKITMYDMAAAAGAS 205
>gi|294102240|ref|YP_003554098.1| transcriptional regulator, XRE family [Aminobacterium colombiense
DSM 12261]
gi|293617220|gb|ADE57374.1| transcriptional regulator, XRE family [Aminobacterium colombiense
DSM 12261]
Length = 345
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/120 (11%), Positives = 43/120 (35%), Gaps = 16/120 (13%)
Query: 28 KYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV-----FVGVYHRFKYFD 82
K + +LK+ + ++ +S+ + + GPV +Y
Sbjct: 203 KMGERVSYLKLNKLLFYCDFYAFKTLTRSITGLQYVNMQYGPVPGGAFSYTIYEYLNEVG 262
Query: 83 SHPIEVIM-----DLSFRIFPKIAN------QEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
+ I++I + + P+ ++ ++ ++++ + ++L + EE
Sbjct: 263 ALDIDIIECEDEKTQHWILLPQNSSHCGLLSEQEKKLIDEVLEALGPLKGKELTNLSHEE 322
>gi|219882948|ref|YP_002478112.1| hypothetical protein Achl_4344 [Arthrobacter chlorophenolicus A6]
gi|219861954|gb|ACL42295.1| hypothetical protein Achl_4344 [Arthrobacter chlorophenolicus A6]
Length = 171
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 34/114 (29%), Gaps = 9/114 (7%)
Query: 14 STIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG 73
S V F + + + + I + Y + + EE + K GPV
Sbjct: 5 SVHDVVAFLLAQARGH---LSTSAIHRMTYYAQGWHLASAGTPLFAEEIRIRKTGPVAHA 61
Query: 74 VYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEI 127
++ K D EI+ ++N Y S + E+
Sbjct: 62 LFPLQKD------GCTEDSWPAGNAHAITGHSAEIVSYVFNSYGHMSGISMGEL 109
>gi|189485019|ref|YP_001955960.1| hypothetical protein TGRD_016 [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170286978|dbj|BAG13499.1| conserved hypothetical protein [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 185
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 72/182 (39%), Gaps = 23/182 (12%)
Query: 16 IAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVY 75
I + N+ + K Y +++ K+ + +Y+ + + + ++ ++ A KQG V G+Y
Sbjct: 7 IQIVNYVLQK---YDFSLNYTKLLKLLYIADRECLDRWNFTISEDNYAAMKQGMVLSGLY 63
Query: 76 HRFKYFDSHPIEVIMDLSFRIFPK-------------IANQEIGEIMESIWNKYQSHSTE 122
+ +V D F ++ E+++ + KY S +
Sbjct: 64 DFIRGNADKLSQVKWDSYFYRDNYDLRSRHRENCSYDELSEAEKEMLDEVDKKYHFKSWD 123
Query: 123 QLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKMADGSN------ISPENVVEQIKKP 176
L V + W+ + + N++ I E+I + D IS EN E+ K
Sbjct: 124 YLVNEVVHKFPEWKEV-EAEIGNSSLKIEKEKILSVLDRDEREIKEIISSENAYEKCKND 182
Query: 177 VR 178
++
Sbjct: 183 LK 184
>gi|206601846|gb|EDZ38329.1| Hypothetical protein CGL2_11278038 [Leptospirillum sp. Group II
'5-way CG']
Length = 187
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 16/156 (10%)
Query: 36 LKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFK--YFDSHPIEVIMDLS 93
+++ + +YL+ +L+ + + A K GPV VY R K + + D
Sbjct: 40 MRLLKLLYLSGRAALLEYGCLITGDRYIAMKLGPVLSNVYDRIKEGEWGGRIRTIKYDAR 99
Query: 94 FRIFPKIANQEIG---EIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPNDPNTNRTI 150
I P++ +++ + Q++ L ++ E W + N+ I
Sbjct: 100 L-IGPELTGPLSEAGVNLLDEVSRFCQTYDHWNLSDLTH-ELPEW------GETPRNQDI 151
Query: 151 TVEEITKMADGSNISPENVVEQIKKPVRFD---SDS 183
VE I S+ + E+ + F+ SDS
Sbjct: 152 PVERILDTLRKSSKEIKETAEEARDETFFEEVFSDS 187
>gi|305664061|ref|YP_003860349.1| hypothetical protein Igag_1672 [Ignisphaera aggregans DSM 17230]
gi|304378630|gb|ADM28469.1| conserved hypothetical protein [Ignisphaera aggregans DSM 17230]
Length = 140
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 40/118 (33%), Gaps = 7/118 (5%)
Query: 14 STIAVANFFIDK-GVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV-- 70
+ + I + I +++ + ++L + K + + + W GP
Sbjct: 3 DPRDIVLYTISRYAAIAGRGISRIRLMKLLFLADYIYKKRFNKKLTNAKWIMWLFGPFSK 62
Query: 71 -FVGVYHRFKYFDSHPIEVIMDLSFRIFPKIA---NQEIGEIMESIWNKYQSHSTEQL 124
+ V + IE + + + E+ I++ + +Y S EQL
Sbjct: 63 DILNVLDELEVKGKVIIEDVDGIGIFYSTYERVRLDDEVKNIIDEVIREYGVKSLEQL 120
>gi|281421912|ref|ZP_06252911.1| conserved hypothetical protein [Prevotella copri DSM 18205]
gi|281404028|gb|EFB34708.1| conserved hypothetical protein [Prevotella copri DSM 18205]
Length = 197
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 51/165 (30%), Gaps = 27/165 (16%)
Query: 22 FIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYH----- 76
+I K + H + + +Y D + + ++ + A K GPV Y
Sbjct: 16 YILKAFPEGVDYIH--LFKVMYFAQQDQLKEYGLPIMYDTFVARKHGPVPALTYKVLRGI 73
Query: 77 ---------RFKYFDSH-PIEVIMDLSFRIFPKIANQ--------EIGEIMESIWNKYQS 118
K F I + D + + +++ K +
Sbjct: 74 EGKADLSSPELKDFADSLNIAISQDGHQLVLASKNAECDMDELSVADVKMLNKWIEKCKD 133
Query: 119 HSTEQLQEIVQEENKTWRRLYDPNDP-NTNRTITVEEITKMADGS 162
+ L + E++ W+R D + IT+ ++ A S
Sbjct: 134 VESFDLSDKSH-EDRAWKRAKRQADKTGEDSKITMYDMAAAAGAS 177
>gi|255039063|ref|YP_003089684.1| helix-turn-helix domain-containing protein [Dyadobacter fermentans
DSM 18053]
gi|254951819|gb|ACT96519.1| helix-turn-helix domain-containing protein [Dyadobacter fermentans
DSM 18053]
Length = 328
Score = 50.0 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 14/117 (11%)
Query: 32 PIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV---FVGVYHRF---------- 78
P+ K+ + ++ T + S E +A + GPV F +Y
Sbjct: 187 PLFKTKLNKLLFYTDFNTYKLTGYSTTGLEYRAIQFGPVPSQFQKMYVNLSETGQISIDE 246
Query: 79 KYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTW 135
+YF + ++ + + E +++E + N+Y ST+ + ++ EE W
Sbjct: 247 QYFGNGAYGDEINAKVAFDQTLFSPEELDVLEHVANRYAKLSTDDIVKLSHEETG-W 302
>gi|255316706|ref|ZP_05358289.1| hypothetical protein CdifQCD-7_20267 [Clostridium difficile
QCD-76w55]
Length = 67
Score = 49.6 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 10 NPPYSTIAVANFFIDKGVKY-SIPIDHLKIQQFIYLTHCDVVLQKKKSML---DEEPQA 64
+ YS VA + + + ID+L++ + +YL + +S+ DE +A
Sbjct: 9 DSRYSAKDVAIYVLWYCENKLNKAIDNLRLNKLLYLIQAKYLYLYNESIFLNLDERFEA 67
>gi|307565444|ref|ZP_07627933.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A]
gi|307345894|gb|EFN91242.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A]
Length = 179
Score = 49.6 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 32/144 (22%)
Query: 40 QFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVY-------HRFKYF----------- 81
+ +Y + + ++ ++ A + GPV +Y H K
Sbjct: 30 KILYFAQQKHLCKWGSRIVADDFVAMEYGPVPTKLYSAVCKNEHYAKELIPLFTEAIEFA 89
Query: 82 DSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDP 141
++ ++ +I + ESI + S +L + + W+
Sbjct: 90 GKDASNTLLPKREANMDYLSPADIESLKESIAEN-KGLSFGELVDKSH--DSAWQ----- 141
Query: 142 NDPNTNR--TITVEEITKMADGSN 163
TN +++ +I K A G+N
Sbjct: 142 ---ATNNCCVMSISDIAK-AGGAN 161
>gi|288929548|ref|ZP_06423392.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str.
F0108]
gi|288329053|gb|EFC67640.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str.
F0108]
Length = 182
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 19/129 (14%)
Query: 40 QFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFK--YFDSHPIEVIMDLSFR-- 95
+ IY + + + M+ ++ A GPV +Y+ K F ++ ++D S
Sbjct: 30 KVIYFANVAHLAKYGSLMVSDDFCALPDGPVPSNLYNCVKGEQFCDKDLQSMLDESVSKG 89
Query: 96 --------IFPKIANQE-----IGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPN 142
+ A++E E+++ ++ L+ E W+R ++ +
Sbjct: 90 KDDAYYMLEAKREADEEYLSKADIEVLDESISENAYLPYGDLRAKSHGEE--WKRAFEQH 147
Query: 143 DPNTNRTIT 151
I
Sbjct: 148 GRKVVDVIG 156
>gi|303235895|ref|ZP_07322498.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
gi|302483768|gb|EFL46760.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
Length = 179
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 31/154 (20%)
Query: 40 QFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYF------------------ 81
+ +Y + + ++ +E A + GPV +Y ++
Sbjct: 30 KILYFAQQKHLCKWGSRIVADEFVAMEYGPVPTQLYSAVRHNEHYAKELIPLFAEAIGFA 89
Query: 82 DSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDP 141
++ ++ +I + ESI + S +L E + WR +
Sbjct: 90 GKDASNTLLAKRDTNMDYLSPADIESLNESIAEN-KGLSFGELVEKSH--DSAWRAASNC 146
Query: 142 NDPNTNRTITVEEITKMADGSNISPENVVEQIKK 175
++V +I + A G+N E +VE I +
Sbjct: 147 G------VMSVGDIAR-AGGAN---EGLVEYINE 170
>gi|213962003|ref|ZP_03390268.1| conserved hypothetical protein [Capnocytophaga sputigena Capno]
gi|213955356|gb|EEB66673.1| conserved hypothetical protein [Capnocytophaga sputigena Capno]
Length = 167
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 12/108 (11%), Positives = 36/108 (33%), Gaps = 7/108 (6%)
Query: 37 KIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRI 96
K+ + +Y ++ + + + + GPV + + + + + + F
Sbjct: 29 KVFKILYFADQKHLVNYGRPITGDTYVKMQYGPVPSFLRNVSEGNEKEGLINKTNKHFLT 88
Query: 97 FPKIANQEI-----GEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLY 139
++E E + + + S ++L E + W+
Sbjct: 89 TSYQYDEEDLSESEIECLNEAIAENKDISFKKLTEKSH--DSAWQNAQ 134
>gi|134297909|ref|YP_001111405.1| hypothetical protein Dred_0030 [Desulfotomaculum reducens MI-1]
gi|134050609|gb|ABO48580.1| hypothetical protein Dred_0030 [Desulfotomaculum reducens MI-1]
Length = 334
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 42/126 (33%), Gaps = 12/126 (9%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
Y + +F S+ I K+ + ++ + S+ GPV
Sbjct: 190 YKKFSQMVYFFALKEITSLYIT--KLNKLMFYADYYYYKKFGTSLSGTRYIRHNYGPV-P 246
Query: 73 GVYHRFKYFDS-HPIEVIMDLS------FRIFPKIANQEIGEIMESIWNKYQSHSTEQLQ 125
Y +DS IE+ D N + I++ + K++ +++++
Sbjct: 247 NKYQTL--YDSIDTIEIFEDEYGNYIKPANDLALTFNDKEISILDLVNQKFKHMNSKEIS 304
Query: 126 EIVQEE 131
+E
Sbjct: 305 NFSHKE 310
>gi|71737493|ref|YP_277059.1| hypothetical protein PSPPH_4974 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71558046|gb|AAZ37257.1| conserved hypothetical protein [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 183
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 20/147 (13%), Positives = 51/147 (34%), Gaps = 20/147 (13%)
Query: 17 AVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYH 76
+A FF+ + P+ H+K+ + +YL + + M D+ K GP+
Sbjct: 10 QMAAFFLAR---REAPMAHIKLMKLLYLADRLSMERYDAPMSDDSQCNMKNGPILSATLD 66
Query: 77 -------------RFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQ 123
++ + + D ++ +++ ++ I+E ++ + +
Sbjct: 67 LMNGSRSSDAWSALISPIRNNEVTLQRDFAWDELDELSRADL-AILEEVFANFGQLKRWE 125
Query: 124 LQEIVQEENKT-WRRLYDPNDPNTNRT 149
L + V W + P +
Sbjct: 126 LVDYVH--TLPEWENPGSSSKPIDSEV 150
>gi|254440482|ref|ZP_05053976.1| hypothetical protein OA307_5352 [Octadecabacter antarcticus 307]
gi|198255928|gb|EDY80242.1| hypothetical protein OA307_5352 [Octadecabacter antarcticus 307]
Length = 65
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 20/43 (46%)
Query: 20 NFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEP 62
+F I + + + LK+Q+ ++ + V + + +E P
Sbjct: 22 DFLIVESCERGDLLTPLKLQKLMFYSDAWFVALHDEELTNEYP 64
>gi|281412556|ref|YP_003346635.1| XRE family transcriptional regulator [Thermotoga naphthophila
RKU-10]
gi|281373659|gb|ADA67221.1| transcriptional regulator, XRE family [Thermotoga naphthophila
RKU-10]
Length = 330
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 21/145 (14%)
Query: 18 VANFFIDKGVKYSIP-IDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGP------- 69
+ + + K + I +K+ + ++ Q +S+ GP
Sbjct: 189 IVAYILQKLREQGYKYITKVKLMKLLWFVDKGYSKQYGRSISGLTYAHLPLGPAPHYHDT 248
Query: 70 ---------VFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHS 120
V V DS I+ ++L F + N+ +I++ I KY +
Sbjct: 249 LLELLETAGVI-TVEREINENDSETIK--IELKDETFERYINEREKKILDEILQKYGLMN 305
Query: 121 TEQLQEIVQEENKTWRRLYDPNDPN 145
T L + E++ W+ D
Sbjct: 306 TSDLIKKSH-EDEIWKSTKDGEKMI 329
>gi|147679206|ref|YP_001213421.1| hypothetical protein PTH_2871 [Pelotomaculum thermopropionicum SI]
gi|146275303|dbj|BAF61052.1| hypothetical membrane protein [Pelotomaculum thermopropionicum SI]
Length = 190
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 54/159 (33%), Gaps = 24/159 (15%)
Query: 22 FIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV--------- 72
F++K + + K+ + I + + S+ K GPV
Sbjct: 15 FLNKAKE----VPKTKLAKLILFAEIEHFQRTGDSVTGLYFVRMKMGPVIAFFDEVLKDG 70
Query: 73 --GVYHRFKYFDSHPI--EVIMDLSFRIFPKIA---NQEIGEIMESIWNKYQSHSTEQLQ 125
++ K PI E + PK ++E+ E + + KY + +L
Sbjct: 71 EGELWD--KKTTPIPIYEERKEKFQYCYAPKREAELSEEVQETVNIVCKKYGWKTGTELS 128
Query: 126 EIVQEENKTWRRLYDPNDPNTNRTITVEEITKMADGSNI 164
+ + W+ +PN+P + E + ++I
Sbjct: 129 RLSH-DLPAWKYS-EPNEPIYVAELACESEEEYFALTDI 165
>gi|219666421|ref|YP_002456856.1| hypothetical protein Dhaf_0353 [Desulfitobacterium hafniense DCB-2]
gi|219536681|gb|ACL18420.1| helix-turn-helix domain-containing protein [Desulfitobacterium
hafniense DCB-2]
Length = 332
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 14/108 (12%), Positives = 37/108 (34%), Gaps = 11/108 (10%)
Query: 37 KIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV------FVGVYHRFKYFDSHPIEVIM 90
K+Q+ +Y + + GPV V ++ P + +
Sbjct: 204 KLQKLLYYADNLHFKRYGYPITGLVYIHHHFGPVPVNHDLIHWVLESVGVIETKPYDGLY 263
Query: 91 DLSFRIFPKIANQEI-----GEIMESIWNKYQSHSTEQLQEIVQEENK 133
+ + + NQ++ E++ +I ++ S ++ + +E
Sbjct: 264 EGEILMPTERGNQDLFSNEELEVIFAIAEYFKDFSATKISDFSHKEKG 311
>gi|289522655|ref|ZP_06439509.1| hypothetical protein HMPREF1705_00562 [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289504491|gb|EFD25655.1| hypothetical protein HMPREF1705_00562 [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 206
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 51/138 (36%), Gaps = 18/138 (13%)
Query: 17 AVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYH 76
AVA F + + I +F+ L + + + E A K GPV +Y+
Sbjct: 20 AVAYFAFEFNRRKGYYPRQTWIYKFLALLDFRSLKKTGVPCIGLEYDAMKFGPVPNILYN 79
Query: 77 -----RFKYFDSHPIEVIMDLSFRIFPKIA------NQEIGEIMESIWNKYQSHSTEQLQ 125
RFK F IE D FR+ P + ++ME I + Y L
Sbjct: 80 SRSCLRFKKF--KFIE-TADGGFRVEPVSKPNLDYFADDEIDLMEEILDDYTR-DGVNLD 135
Query: 126 EI---VQEENKTWRRLYD 140
+ +E K W + +D
Sbjct: 136 NLIANAHKEIKAWNKAWD 153
>gi|89897252|ref|YP_520739.1| hypothetical protein DSY4506 [Desulfitobacterium hafniense Y51]
gi|89336700|dbj|BAE86295.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 331
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 14/121 (11%), Positives = 37/121 (30%), Gaps = 11/121 (9%)
Query: 22 FIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV---FVGVYHRF 78
+ + + + K+Q+ +Y + + GPV +Y
Sbjct: 188 MVQIFAETNRDLVKTKLQKLLYYADNLHFKRYGYPITGLAYIHHHFGPVPANHDLIYWAL 247
Query: 79 KYFD---SHPIEVIMDLSFRIFPKIAN-----QEIGEIMESIWNKYQSHSTEQLQEIVQE 130
+ + P + + I + N E E++ ++ + S ++ +
Sbjct: 248 ESVGVIETKPYDGPYEGEILISTEEGNHGLFSDEELEVVLTVAGYFNDFSATRISDFSHR 307
Query: 131 E 131
E
Sbjct: 308 E 308
>gi|308277049|gb|ADO26948.1| Hypothetical protein CpI19_1694 [Corynebacterium
pseudotuberculosis I19]
Length = 77
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 21/62 (33%)
Query: 34 DHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLS 93
+K+Q+ ++ K+ +L + W G V + F F I+
Sbjct: 4 STMKLQKLLHFVASRYQKIAKQPLLGKVTSTWDYGEVVYSAWGEFCSFSKGNIKRYARDD 63
Query: 94 FR 95
R
Sbjct: 64 AR 65
>gi|302206804|gb|ADL11146.1| Hypothetical protein CpC231_1685 [Corynebacterium
pseudotuberculosis C231]
Length = 82
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 21/62 (33%)
Query: 34 DHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLS 93
+K+Q+ ++ K+ +L + W G V + F F I+
Sbjct: 9 STMKLQKLLHFVASRYQKIAKQPLLGKVTSTWDYGEVVYSAWGEFCSFSKGNIKRYARDD 68
Query: 94 FR 95
R
Sbjct: 69 AR 70
>gi|302331358|gb|ADL21552.1| Hypothetical protein Cp1002_1685 [Corynebacterium
pseudotuberculosis 1002]
Length = 72
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 21/60 (35%)
Query: 36 LKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFR 95
+K+Q+ ++ K+ +L + W G V + F F I+ R
Sbjct: 1 MKLQKLLHFVASRYQKIAKQPLLGKVTSTWDYGEVVYSAWGEFCSFSKGNIKRYARDDAR 60
>gi|320537552|ref|ZP_08037492.1| hypothetical protein HMPREF9554_02244 [Treponema phagedenis
F0421]
gi|320145600|gb|EFW37276.1| hypothetical protein HMPREF9554_02244 [Treponema phagedenis
F0421]
Length = 50
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 9/42 (21%), Positives = 20/42 (47%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKK 54
Y +A F ++ + + + +LK+Q+ +Y H V +
Sbjct: 3 YKAKDIAQFVVNYAAEKNKNVTNLKLQKMLYFLHSFVFTIHQ 44
>gi|37524858|ref|NP_928202.1| hypothetical protein plu0863 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36784283|emb|CAE13158.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 184
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 18/130 (13%), Positives = 40/130 (30%), Gaps = 32/130 (24%)
Query: 40 QFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFK-------------------- 79
+ +Y + + + + + A K GPV V Y K
Sbjct: 37 KILYFADRLHLERYGRLITGDNYLAMKDGPVAVNAYDIIKVARGDGRFIPNKCDVDVIRS 96
Query: 80 ------YFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENK 133
+H I + D +F + + + KY + S +++++I +
Sbjct: 97 LLSVEGRHGNHQIRALRDFDEDVF----SDSDIDCINEAIEKYGNLSFKEIRDISH--DS 150
Query: 134 TWRRLYDPND 143
W ++
Sbjct: 151 VWMTANQNSE 160
>gi|315122577|ref|YP_004063066.1| hypothetical protein CKC_04145 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495979|gb|ADR52578.1| hypothetical protein CKC_04145 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 47
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 102 NQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYD 140
+Q+ I++ ++ Y ST +L+ + E W+ Y+
Sbjct: 10 DQKDRNILDDVFEFYGQFSTWKLRNMTHTE-APWKDAYE 47
>gi|261417082|ref|YP_003250765.1| hypothetical protein Fisuc_2700 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373538|gb|ACX76283.1| conserved hypothetical protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302326235|gb|ADL25436.1| conserved hypothetical protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 180
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 46/129 (35%), Gaps = 15/129 (11%)
Query: 37 KIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR----------FKYFDSHPI 86
KI + ++ + + +++ + A GPV +Y F+ FD
Sbjct: 33 KIFKILWFADLYHLKKYGRTVTGDTYIAMNNGPVPSVLYDEMKFTPSEGDAFRRFDKGSE 92
Query: 87 EVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPNDPNT 146
+ + + ++ E + ++ Y+ S ++L + + W
Sbjct: 93 KGFVVPLKTVNSDFLSESDIEALSYSFDLYKDKSFDELTRLSHQH--AWNSA---QKSGM 147
Query: 147 NRTITVEEI 155
N +I ++EI
Sbjct: 148 NTSIRIDEI 156
>gi|218688964|ref|YP_002397176.1| hypothetical protein ECED1_1155 [Escherichia coli ED1a]
gi|218426528|emb|CAR07356.1| conserved hypothetical protein [Escherichia coli ED1a]
Length = 174
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 47/130 (36%), Gaps = 15/130 (11%)
Query: 36 LKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHP-------IEV 88
++ + +YL+ + + + + +GPV Y K + I
Sbjct: 13 MRFIKLMYLSDRKAMELYGFPISGDHYFSMNKGPVLSQTYSLVKDGSENEYSPWESWISD 72
Query: 89 IMDLSFRIFPKIAN-QEIGEI-------MESIWNKYQSHSTEQLQEIVQEENKTWRRLYD 140
+ D ++ ++ E+GE+ M+ I+ +Y +L + WR +
Sbjct: 73 VADHKVEMWRTFSSVDELGELSPAEIESMDIIFGQYGGWDAFRLCDETHRICGEWRDPHG 132
Query: 141 PNDPNTNRTI 150
+ P + + I
Sbjct: 133 SSIPISLKDI 142
>gi|160891853|ref|ZP_02072856.1| hypothetical protein BACUNI_04310 [Bacteroides uniformis ATCC 8492]
gi|317480333|ref|ZP_07939434.1| hypothetical protein HMPREF1007_02551 [Bacteroides sp. 4_1_36]
gi|156858331|gb|EDO51762.1| hypothetical protein BACUNI_04310 [Bacteroides uniformis ATCC 8492]
gi|316903508|gb|EFV25361.1| hypothetical protein HMPREF1007_02551 [Bacteroides sp. 4_1_36]
Length = 189
Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 19/148 (12%), Positives = 47/148 (31%), Gaps = 27/148 (18%)
Query: 17 AVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYH 76
AV + + + + +D + + + +Y K ++ + A ++GPV +Y
Sbjct: 12 AVTLYILKQCGE----LDFIHLFKILYFAERQHYATYGKHLVKDTFCALERGPVPSFLYD 67
Query: 77 RFK--YFDSHPIEVIMDLSFRIFPKIANQE-------------------IGEIMESIWNK 115
K +H ++ + K N E +++ +
Sbjct: 68 AVKVATNSAHAVKGSLLQQLADSLKPGNAECYYFIGAAEEPDMDELSKADLACLDASIKE 127
Query: 116 YQSHSTEQLQEIVQEENKTWRRLYDPND 143
+QL + + W+ +D
Sbjct: 128 NLQKDAKQLSKDSH--DVAWQTAWDARS 153
>gi|72080349|ref|YP_287407.1| hypothetical protein MHP7448_0007 [Mycoplasma hyopneumoniae 7448]
Length = 214
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 48/149 (32%), Gaps = 37/149 (24%)
Query: 19 ANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGP----VFVGV 74
A ++ID G + I +Q+ ++ TH + E Q++K GP V
Sbjct: 40 AYYYIDTGERE---IYRTWVQKILWFTHWKFYRMYQIPFFSENFQSYKYGPISWTVLQTQ 96
Query: 75 YHRFKYFDSH--PIEVIMDLS------------FRIFPKIANQEIGEIMES--------- 111
+ + F + I+ I+D F N++ GE +
Sbjct: 97 FFGIESFKNSQYNIDEILDFHQNNLVDEFKNRLKEDFLNDFNEDFGETFDENQIKGDLDL 156
Query: 112 -------IWNKYQSHSTEQLQEIVQEENK 133
++ K + + L + +
Sbjct: 157 RWSCFVFVFEKLKKFRPKDLINLSHSQKS 185
>gi|261417079|ref|YP_003250762.1| hypothetical protein Fisuc_2697 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373535|gb|ACX76280.1| hypothetical protein Fisuc_2697 [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 187
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 13/95 (13%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR 77
+ N + K+ +D++K+ + IY D + + K+++ E +A GP + +
Sbjct: 10 IENVILYVLQKFDDGVDYIKLFKIIYFAQRDYLCRFGKTLVPETFKARMHGP-IPTLTDK 68
Query: 78 FKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESI 112
I+ + D FP ++ E MESI
Sbjct: 69 V-------IKNVEDGVGDDFP-----DLKEFMESI 91
>gi|71893366|ref|YP_278812.1| hypothetical protein MHJ_0007 [Mycoplasma hyopneumoniae J]
Length = 214
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 47/149 (31%), Gaps = 37/149 (24%)
Query: 19 ANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGP----VFVGV 74
A ++ID G + +Q+ ++ TH + E Q++K GP V
Sbjct: 40 AYYYIDTGEREVYRTW---VQKILWFTHWKFYRMYQIPFFSENFQSYKYGPISWTVLQTQ 96
Query: 75 YHRFKYFDSH--PIEVIMDLS------------FRIFPKIANQEIGEIMES--------- 111
+ + F + I+ I+D F N++ GE +
Sbjct: 97 FFGIESFKNSQYNIDEILDFHQNNLVDEFKNRLKEDFLNDFNEDFGETFDENQIKGDLDL 156
Query: 112 -------IWNKYQSHSTEQLQEIVQEENK 133
++ K + + L + +
Sbjct: 157 RWSCFVFVFEKLKKFRPKDLINLSHSQKS 185
>gi|302327854|gb|ADL27055.1| conserved hypothetical protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 191
Score = 45.0 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 13/95 (13%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHR 77
+ N + K+ +D++K+ + IY D + + K+++ E +A GP + +
Sbjct: 14 IENVILYVLQKFDDGVDYIKLFKIIYFAQRDYLCRFGKTLVPETFKARMHGP-IPTLTDK 72
Query: 78 FKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESI 112
I+ + D FP ++ E MESI
Sbjct: 73 V-------IKNVEDGVGDDFP-----DLKEFMESI 95
>gi|281422771|ref|ZP_06253770.1| hypothetical protein PREVCOP_06687 [Prevotella copri DSM 18205]
gi|281403139|gb|EFB33819.1| hypothetical protein PREVCOP_06687 [Prevotella copri DSM 18205]
Length = 123
Score = 45.0 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 49/134 (36%), Gaps = 16/134 (11%)
Query: 46 HCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEI 105
+ ++Q + + A GP V+ + I + + P +E
Sbjct: 2 QRECIVQTGSPLFEAIFYAHTLGPYIPEVHAAY----------ISNSLHDVLPSSIIEEY 51
Query: 106 GEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKMADGSNIS 165
I +S++ + T L ++ E+ W+R + + + +++I + A +
Sbjct: 52 KTIFDSVFELLSAKKTRSLSNLIHGEDS-WKRAMMQGEGTS---MDIQDIKEDAARFRVR 107
Query: 166 P--ENVVEQIKKPV 177
+EQ KPV
Sbjct: 108 RFLLTNLEQFHKPV 121
>gi|298482299|ref|ZP_07000486.1| toxin-antitoxin system, antitoxin component, Xre family
[Bacteroides sp. D22]
gi|298271586|gb|EFI13160.1| toxin-antitoxin system, antitoxin component, Xre family
[Bacteroides sp. D22]
Length = 331
Score = 45.0 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 39/111 (35%), Gaps = 11/111 (9%)
Query: 37 KIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV---FVGVYHRFKYFDSHPIEVIMDLS 93
K+ + ++ + + K + + QA GPV + +Y I + S
Sbjct: 203 KLNKLLFYSDFLSYKKYGKGISGLQYQAISYGPVPVRYSTIYENLDGLKKEIINLGNGYS 262
Query: 94 FRIFPKIA-------NQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRR 137
I + E E+++ + ++ ++ E+ E WR+
Sbjct: 263 GSIITTVEQFEQSLFTVEELEVLQCVLVHFEKSKANEISEMSHAEE-AWRQ 312
>gi|237722819|ref|ZP_04553300.1| helix-turn-helix domain-containing protein [Bacteroides sp. 2_2_4]
gi|229447341|gb|EEO53132.1| helix-turn-helix domain-containing protein [Bacteroides sp. 2_2_4]
gi|295085329|emb|CBK66852.1| hypothetical protein [Bacteroides xylanisolvens XB1A]
Length = 331
Score = 45.0 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 39/111 (35%), Gaps = 11/111 (9%)
Query: 37 KIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV---FVGVYHRFKYFDSHPIEVIMDLS 93
K+ + ++ + + K + + QA GPV + +Y I + S
Sbjct: 203 KLNKLLFYSDFLSYKKYGKGISGLQYQAISYGPVPVRYSTIYENLDGLKKEIINLGNGYS 262
Query: 94 FRIFPKIA-------NQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRR 137
I + E E+++ + ++ ++ E+ E WR+
Sbjct: 263 GSIITTVEQFEQSLFTVEELEVLQCVLVHFEKSKANEISEMSHAEE-AWRQ 312
>gi|299147612|ref|ZP_07040676.1| toxin-antitoxin system, antitoxin component, Xre family
[Bacteroides sp. 3_1_23]
gi|298514399|gb|EFI38284.1| toxin-antitoxin system, antitoxin component, Xre family
[Bacteroides sp. 3_1_23]
Length = 331
Score = 45.0 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 39/111 (35%), Gaps = 11/111 (9%)
Query: 37 KIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV---FVGVYHRFKYFDSHPIEVIMDLS 93
K+ + ++ + + K + + QA GPV + +Y I + S
Sbjct: 203 KLNKLLFYSDFLSYKKYGKGISGLQYQAINYGPVPVRYSTIYENLDGLKKEIINLGNGYS 262
Query: 94 FRIFPKIA-------NQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRR 137
I + E E+++ + ++ ++ E+ E WR+
Sbjct: 263 GSIITTVEQFEQSLFTVEELEVLQCVLVHFEKSKANEISEMSHAEE-AWRQ 312
>gi|144575234|gb|AAZ53384.2| hypothetical protein MHP7448_0007 [Mycoplasma hyopneumoniae 7448]
Length = 189
Score = 45.0 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 48/149 (32%), Gaps = 37/149 (24%)
Query: 19 ANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGP----VFVGV 74
A ++ID G + I +Q+ ++ TH + E Q++K GP V
Sbjct: 15 AYYYIDTGERE---IYRTWVQKILWFTHWKFYRMYQIPFFSENFQSYKYGPISWTVLQTQ 71
Query: 75 YHRFKYFDSH--PIEVIMDLS------------FRIFPKIANQEIGEIMES--------- 111
+ + F + I+ I+D F N++ GE +
Sbjct: 72 FFGIESFKNSQYNIDEILDFHQNNLVDEFKNRLKEDFLNDFNEDFGETFDENQIKGDLDL 131
Query: 112 -------IWNKYQSHSTEQLQEIVQEENK 133
++ K + + L + +
Sbjct: 132 RWSCFVFVFEKLKKFRPKDLINLSHSQKS 160
>gi|144227421|gb|AAZ44101.2| hypothetical protein MHJ_0007 [Mycoplasma hyopneumoniae J]
Length = 189
Score = 44.6 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 47/149 (31%), Gaps = 37/149 (24%)
Query: 19 ANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGP----VFVGV 74
A ++ID G + +Q+ ++ TH + E Q++K GP V
Sbjct: 15 AYYYIDTGEREVYRTW---VQKILWFTHWKFYRMYQIPFFSENFQSYKYGPISWTVLQTQ 71
Query: 75 YHRFKYFDSH--PIEVIMDLS------------FRIFPKIANQEIGEIMES--------- 111
+ + F + I+ I+D F N++ GE +
Sbjct: 72 FFGIESFKNSQYNIDEILDFHQNNLVDEFKNRLKEDFLNDFNEDFGETFDENQIKGDLDL 131
Query: 112 -------IWNKYQSHSTEQLQEIVQEENK 133
++ K + + L + +
Sbjct: 132 RWSCFVFVFEKLKKFRPKDLINLSHSQKS 160
>gi|146301357|ref|YP_001195948.1| hypothetical protein Fjoh_3615 [Flavobacterium johnsoniae UW101]
gi|146155775|gb|ABQ06629.1| hypothetical protein Fjoh_3615 [Flavobacterium johnsoniae UW101]
Length = 170
Score = 44.6 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 33/104 (31%), Gaps = 15/104 (14%)
Query: 37 KIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDL---- 92
K + +Y +L+ + + + + GPV K IE + ++
Sbjct: 29 KTYKILYFADQKHLLKYGRPIFGDTYVKMQYGPV-PS---FVKNVVDEEIEGLEEVVAKY 84
Query: 93 -SFRIFPKIA------NQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
F + P +Q E + + ++ S +L
Sbjct: 85 HRFNLQPLTEANLDYLSQSDLECLRESIEENKNLSFIELTNKSH 128
>gi|296126965|ref|YP_003634217.1| hypothetical protein Bmur_1940 [Brachyspira murdochii DSM 12563]
gi|296018781|gb|ADG72018.1| conserved hypothetical protein [Brachyspira murdochii DSM 12563]
Length = 184
Score = 44.6 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 16/122 (13%), Positives = 47/122 (38%), Gaps = 13/122 (10%)
Query: 21 FFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV---FVGVYHR 77
+ IDK K + +K+ + + T ++ + K++ ++ + GPV + + +
Sbjct: 27 YIIDKC-KNPYKLGSIKLNKILLFTDGILLRKTGKTLTEDTYIKRQFGPVPKNILKILNI 85
Query: 78 FKYFDSHPIEVIMDLSFRIF---------PKIANQEIGEIMESIWNKYQSHSTEQLQEIV 128
K ++ I + +++ EI + + Y + +++ +I
Sbjct: 86 LKNDNAIAIREGEKNNDARLFFSLKEPNISNLSSIEIDALYTFTMHIYNNFKAKEISDIS 145
Query: 129 QE 130
+
Sbjct: 146 YQ 147
>gi|160883589|ref|ZP_02064592.1| hypothetical protein BACOVA_01561 [Bacteroides ovatus ATCC 8483]
gi|156111002|gb|EDO12747.1| hypothetical protein BACOVA_01561 [Bacteroides ovatus ATCC 8483]
Length = 331
Score = 44.3 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 11/111 (9%)
Query: 37 KIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV---FVGVYHRFKYFDSHPIEVIMDLS 93
K+ + ++ + + K + + QA GPV + +Y I + S
Sbjct: 203 KLNKLLFYSDFLSYKKYGKGISGLQYQAISYGPVPVRYSTIYENLDGLKKEIINLGNGYS 262
Query: 94 FRIFPKIA-------NQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRR 137
+ + E E+++ + ++ ++ E+ E WR+
Sbjct: 263 GSMITTVEQFEQSLFTVEELEVLQCVLAHFEKSKANEISEMSHAEE-AWRQ 312
>gi|242308942|ref|ZP_04808097.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
gi|239524366|gb|EEQ64232.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
Length = 186
Score = 43.9 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 17/130 (13%)
Query: 21 FFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKY 80
+ I G K + + + ++ + + + +S+ + A K G V V
Sbjct: 12 YIIKNGKKPYDKVS---LLKLVFFSDRYHLRKYGRSISHDTYYAMKHGAVASNVKDILSQ 68
Query: 81 -FDSHP-------IEVIMDLSFRIFPKIANQEI-----GEIMESIWNKYQSHSTEQLQEI 127
F+S I D + I K + E+ E M+ + + T +L EI
Sbjct: 69 NFESDEEQEYFFNYISISDNKYYITNKEKSLEMLSKTNEEAMDFALKHFGNIETFKLAEI 128
Query: 128 VQEENKTWRR 137
+ W++
Sbjct: 129 SHQ-YPEWKK 137
>gi|54019976|ref|YP_115522.1| hypothetical protein mhp007 [Mycoplasma hyopneumoniae 232]
gi|53987149|gb|AAV27350.1| hypothetical protein mhp007 [Mycoplasma hyopneumoniae 232]
gi|312600980|gb|ADQ90235.1| Putative uncharacterized protein [Mycoplasma hyopneumoniae 168]
Length = 189
Score = 43.1 bits (100), Expect = 0.050, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 9/81 (11%)
Query: 19 ANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGP----VFVGV 74
A ++ID G + +Q+ ++ TH + E Q++K GP V
Sbjct: 15 AYYYIDTGEREVYRTW---VQKILWFTHWKFYRMYQIPFFSENFQSYKYGPISWTVLQTQ 71
Query: 75 YHRFKYFDSH--PIEVIMDLS 93
+ + F + I+ I+D
Sbjct: 72 FFGIESFKNSQYNIDEILDFH 92
>gi|322831302|ref|YP_004211329.1| hypothetical protein Rahaq_0575 [Rahnella sp. Y9602]
gi|321166503|gb|ADW72202.1| hypothetical protein Rahaq_0575 [Rahnella sp. Y9602]
Length = 175
Score = 42.7 bits (99), Expect = 0.064, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 45/141 (31%), Gaps = 26/141 (18%)
Query: 40 QFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRF-----------KYFDSHPIEV 88
+ +Y + + + + + A K GPV G + K D+ I
Sbjct: 32 KILYFADRAHLKEYGRMLFGDTYIAMKDGPVASGAFDIIKTARGTASFLPKGLDAETIRK 91
Query: 89 --IMDLSFRIFPKIANQEI-----GEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDP 141
+D + A++ E + +Y S ++ I + W +
Sbjct: 92 ALTVDGYQMKTLRPADENFFSDSDLECINQALEEYGSKPFGVIRRISH--DAIWSSV--- 146
Query: 142 NDPNTNRTITVEEITKMADGS 162
N+ I +E I K D S
Sbjct: 147 ---TENKEIPLEVIAKHLDES 164
>gi|265753782|ref|ZP_06089137.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|263235496|gb|EEZ21020.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 182
Score = 42.7 bits (99), Expect = 0.074, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 19/122 (15%)
Query: 40 QFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKY--FDSHPIEVIMDLSFR-- 95
+ IY + + + M +E A GPV +Y+ K + ++ ++D S
Sbjct: 30 KVIYFANISYLAKYGFRMTTDEFCALPDGPVPSILYNCIKNDCYCDKELKAMIDGSVSKG 89
Query: 96 --------IFPKIANQE-----IGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPN 142
+ A+ + E ++ K +L+E E W R Y +
Sbjct: 90 DCDAYYMLTAKREADLDYLSKADIEEIDRSIEKNAYLPYGELREKSHGEE--WNRAYSNS 147
Query: 143 DP 144
Sbjct: 148 GK 149
>gi|328957230|ref|YP_004374616.1| hypothetical protein CAR_c09070 [Carnobacterium sp. 17-4]
gi|328673554|gb|AEB29600.1| hypothetical protein CAR_c09070 [Carnobacterium sp. 17-4]
Length = 188
Score = 42.3 bits (98), Expect = 0.079, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 46/119 (38%), Gaps = 9/119 (7%)
Query: 36 LKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFR 95
+K+Q++++ + + KS + + ++ GPVF VY + + E +D++
Sbjct: 1 MKLQKYLFF-YELFSKVEGKSYSLDYLKGYENGPVFSEVYGDY-TYRIDEFEPNVDVNGN 58
Query: 96 IFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPNDPNTNRTITVEE 154
+ + + + I K ++L + E N W+ + EE
Sbjct: 59 LEIEKDIAQKASFLAQILTK------KELSNLTHEMNI-WKAKEKDIEKGIKNVPLDEE 110
>gi|71901704|ref|ZP_00683779.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
gi|71728546|gb|EAO30702.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
Length = 35
Score = 42.3 bits (98), Expect = 0.095, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 62 PQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSF 94
+AW+ GPV +Y+ K + S + ++ + +
Sbjct: 1 MKAWRAGPVIRSLYNAIKQYGSSGVTKLLPVRW 33
>gi|307565079|ref|ZP_07627592.1| putative K+-dependent Na+/Ca+ exchanger [Prevotella amnii CRIS
21A-A]
gi|307346248|gb|EFN91572.1| putative K+-dependent Na+/Ca+ exchanger [Prevotella amnii CRIS
21A-A]
Length = 321
Score = 41.9 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 203 LTKEFQEAQVQIKKDSAIARSIQESNIMRFAYSNRSFWVTIVWITIIVAFLLTQIINSNV 262
+ K QEA+ +K D A ++SI NI+ ++ WV+++W I+ LL I+ SN+
Sbjct: 140 MIKTLQEAKSDVKIDKANSKSIISENIIS-EKQHKKIWVSVIW---IIVGLLCLILGSNL 195
Query: 263 FAQLCESKYIATVVSLSAIICGFWAIVG 290
F + + +A+ + +S I G + G
Sbjct: 196 F--VSGAVKVASSLGVSDAIIGLTIVAG 221
>gi|222530461|ref|YP_002574343.1| XRE family transcriptional regulator [Caldicellulosiruptor bescii
DSM 6725]
gi|222457308|gb|ACM61570.1| transcriptional regulator, XRE family [Caldicellulosiruptor bescii
DSM 6725]
Length = 333
Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 12/111 (10%), Positives = 39/111 (35%), Gaps = 14/111 (12%)
Query: 38 IQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG-VYHRFKYFDSH------------ 84
+ + ++ + +S+ + GPV Y+ + S
Sbjct: 205 LNKILWYIDFLHFKYRLRSVTGLRYIKYTYGPVIENFAYNEIIAYPSDKYTVEQYEMPDG 264
Query: 85 PIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTW 135
I+ ++ + + +++ I++ + N + + ++ E+ +E W
Sbjct: 265 AIQTVIKSTGNYDLSVFDEKELAIIDKVINLLKDKTCREISEMSHKEKG-W 314
>gi|312878193|ref|ZP_07738121.1| helix-turn-helix domain-containing protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|311795030|gb|EFR11431.1| helix-turn-helix domain-containing protein [Caldicellulosiruptor
lactoaceticus 6A]
Length = 135
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 15/114 (13%), Positives = 38/114 (33%), Gaps = 14/114 (12%)
Query: 38 IQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG-VYHRFKYFDSH------------ 84
+ ++++ + + + + GPV G VY+ + S
Sbjct: 4 LNKYLWYIDFLHFKRYSRFITGLSYIRYTYGPVIKGFVYNEIATYPSDKFSGEEYKTEDG 63
Query: 85 PIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRL 138
I+ + QE + + ++ N + S + E+ +E W++
Sbjct: 64 AIKTSFKSRRNYDLSLLTQEELDTINTVINFLKDKSCRCISELSHQE-LAWQKT 116
>gi|160890736|ref|ZP_02071739.1| hypothetical protein BACUNI_03181 [Bacteroides uniformis ATCC
8492]
gi|237708246|ref|ZP_04538727.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|156859735|gb|EDO53166.1| hypothetical protein BACUNI_03181 [Bacteroides uniformis ATCC
8492]
gi|229457799|gb|EEO63520.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 190
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 22/44 (50%)
Query: 27 VKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV 70
K+ +D++K+ + IY + ++ K + + +A GPV
Sbjct: 19 RKFPEGVDYIKLFKIIYFAQKEYLVNYGKVLCPDTFKARTFGPV 62
>gi|169826429|ref|YP_001696587.1| hypothetical protein Bsph_0841 [Lysinibacillus sphaericus C3-41]
gi|168990917|gb|ACA38457.1| hypothetical protein Bsph_0841 [Lysinibacillus sphaericus C3-41]
Length = 142
Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 31/84 (36%)
Query: 4 RTFTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQ 63
+ + YS +A++ I + + + +++ IQ + L S E+
Sbjct: 10 KGVFKMGNVYSAQNIASYLIYELNEGHVFVNNQSIQHILTLVERKWQQIFGHSAYQEQVC 69
Query: 64 AWKQGPVFVGVYHRFKYFDSHPIE 87
G + VY ++ + I+
Sbjct: 70 TDDNGFMVKEVYEIYEKYGVSHIQ 93
>gi|119873420|ref|YP_931427.1| hypothetical protein Pisl_1937 [Pyrobaculum islandicum DSM 4184]
gi|119674828|gb|ABL89084.1| hypothetical protein Pisl_1937 [Pyrobaculum islandicum DSM 4184]
Length = 185
Score = 41.2 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 12/136 (8%), Positives = 35/136 (25%), Gaps = 47/136 (34%)
Query: 37 KIQQFIYLTHCD--------VVLQKKKSMLDEEPQAWKQGPVFVGV-----------YHR 77
K+Q+ ++L + W GP V Y
Sbjct: 27 KVQKLMFLVEHWDGGRGVSKSLGLTGY-----RFVVWLYGPYSPQVDEDLEWLVEEGYIS 81
Query: 78 FKYFDSHPIEVIM-DLSFRIFPKIANQEIGEIM----------------------ESIWN 114
+ + ++ D + E +++ +++ +
Sbjct: 82 ERVYGYDSYHSVVADGEVVRLGFYDDDESPKVIYVYRPTLRARFVRIGEPLRARIDAVVD 141
Query: 115 KYQSHSTEQLQEIVQE 130
K+ ++ +L+ +
Sbjct: 142 KFGRYTANELETLTTA 157
>gi|312965293|ref|ZP_07779526.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|312289967|gb|EFR17854.1| conserved hypothetical protein [Escherichia coli 2362-75]
Length = 169
Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 50/134 (37%), Gaps = 20/134 (14%)
Query: 49 VVLQKKKSMLDEEPQAWKQGPVFVGVYHRFK-------YFDSHPIEVIM-DLSFRIFPKI 100
+L+ + + ++ + K GPV + + + + IE ++S R P+
Sbjct: 17 SILKHGRMIGEDSLYSMKFGPVMSNTLNLIRGKAEGIGDYWYNLIETNGHNVSLRSDPRE 76
Query: 101 ANQE---------IGEIMESIWNKYQSHSTEQLQEIVQEEN--KTWRRLYDPNDPNTNRT 149
+ + I++ I+++Y + L + E+ W + P +
Sbjct: 77 MDADEVFDELSRADIRILDEIYSRYGHMNRFDLANMTHLESVCPEWHDPGNSRKPIDLKE 136
Query: 150 ITVEEITKMADGSN 163
+ + E K D +N
Sbjct: 137 MLISE-GKSEDEAN 149
>gi|126651034|ref|ZP_01723245.1| hypothetical protein BB14905_20305 [Bacillus sp. B14905]
gi|126592235|gb|EAZ86284.1| hypothetical protein BB14905_20305 [Bacillus sp. B14905]
Length = 128
Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 29/75 (38%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
YS +A++ I + + + +++ IQ + L S E+ A G
Sbjct: 5 YSAQNIASYLIYELNEGHVFVNNQSIQHILTLVEHKWQQIFGHSAYQEQVCADDIGYTIK 64
Query: 73 GVYHRFKYFDSHPIE 87
VY ++ + I+
Sbjct: 65 EVYETYEKYGVSHIQ 79
>gi|261417070|ref|YP_003250753.1| hypothetical protein Fisuc_2688 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373526|gb|ACX76271.1| hypothetical protein Fisuc_2688 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302325507|gb|ADL24708.1| conserved domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 101
Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 97 FPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYD--PNDPNTNRTITVEE 154
P+ + E+ + +S++++Y S+ L ++ E W+ D N +++++
Sbjct: 13 LPENSITELKPVFDSVFSRYAGRSSWSLSDLTHGETS-WQNARKGLARDAAGNVPMSIDD 71
Query: 155 ITKMAD 160
I A+
Sbjct: 72 IRHDAE 77
>gi|134296119|ref|YP_001119854.1| ATPase-like protein [Burkholderia vietnamiensis G4]
gi|134139276|gb|ABO55019.1| ATPase-like protein [Burkholderia vietnamiensis G4]
Length = 1210
Score = 40.8 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 132 NKTWRRLYDPNDPNT---NRTITVEEITKMADGSNISPENVVEQIKKPVRFD-------- 180
W + P R EI + DG+++ P VE + KP RF
Sbjct: 818 GVPW--GWKPEWEIVLLVARLFMAGEIKLVMDGADLDPLGAVEPLTKPTRFKTVSILKRK 875
Query: 181 -SDSEFATLESQLVKG-FKSMPPQ----LTKEFQEAQVQIKKDSAIARSIQE 226
SD+ T +L + F +MPP+ L EF+ Q+K D A+ E
Sbjct: 876 TSDAPTRTAARELHRDMFATMPPEEEDALVTEFRSHLTQLKTDLERAKGKAE 927
>gi|281426291|ref|ZP_06257204.1| conserved hypothetical protein [Prevotella oris F0302]
gi|281399594|gb|EFB30425.1| conserved hypothetical protein [Prevotella oris F0302]
Length = 168
Score = 40.8 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 42/118 (35%), Gaps = 12/118 (10%)
Query: 34 DHLKIQQFIYLTHCDVVLQKKKSM--LDEEPQAWKQGPVFVGVYHRFK-----YFDSHPI 86
LK+ + ++L ++ + + + A GPV +Y+ + + +
Sbjct: 27 TTLKLIKLLFLVVGVSSNDNEEGLTRIFNKFSAMPYGPVESDIYNAIQTNRLNKYRINSS 86
Query: 87 EVIMDLSFRIFPKIAN-QEIGEIMESIWNKYQSH---STEQLQEIVQEENKTWRRLYD 140
+ I + + Q+I ++ + K +L +I + WR Y+
Sbjct: 87 SCTIQEERDINLQEQDRQDINNAIKLLLAKNPRILQCQPFELVDITH-KWSCWRTCYN 143
>gi|153865266|ref|ZP_01997832.1| conserved hypothetical protein [Beggiatoa sp. SS]
gi|152145256|gb|EDN72167.1| conserved hypothetical protein [Beggiatoa sp. SS]
Length = 79
Score = 40.8 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Query: 98 PKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWR--RLYDPNDPNTNRTITVEEI 155
P N E E + + Y ++ L ++ E WR R+ PN+ +R IT +
Sbjct: 8 PDRLNDEQRETVLVVLKDYGDKPSQCLSDLTHLE-APWREARIGLPNNERGHREITHLAM 66
Query: 156 TKMADGSNISPE 167
+ + N+ PE
Sbjct: 67 AEYYE--NLCPE 76
>gi|257877357|ref|ZP_05657010.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
gi|257811523|gb|EEV40343.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
Length = 594
Score = 40.8 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 168 NVVEQIKKPVRFDSDSEFATLESQLVKG---FKSMPPQLTKEFQEAQVQIKKDSAIARSI 224
+ + Q+ +P+RF SDSE +T ++ L K F L +E + I A S
Sbjct: 222 DTINQVGEPIRFSSDSELSTADTFLKKNDDRFLIAKSTLPMSNKEDIITIYSADTNAYSN 281
Query: 225 QESNIMRFAYSNRSFWVTIVWI----TIIVAFLLTQIINSNVFAQLCESKYIATV 275
+N++R W TIV + T I+ FL + + +QL ++ Y A++
Sbjct: 282 LRANLIR--------WSTIVLVILITTFIIVFLFARFFTKRI-SQLQQAVYFASI 327
>gi|37527099|ref|NP_930443.1| hypothetical protein plu3216 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36786532|emb|CAE15590.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 186
Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 36/117 (30%), Gaps = 15/117 (12%)
Query: 45 THCDVVLQKKKSMLDEEPQAWKQGPVFVGV-------Y--HRF------KYFDSHPIEVI 89
+ + + + +GPV Y F K ++ I +
Sbjct: 34 ADRVSMNDYGYPITGDRMVSMPRGPVLSQTLNLITGDYASDEFGWGAWIKSEKNYEISLK 93
Query: 90 MDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPNDPNT 146
R + + E++++IW ++ S + E + W+ + P +
Sbjct: 94 RKGITRDDFESLSDAELEVLDAIWEQFGHMSRFDIVEYTHKHCTEWQDPGGSSYPIS 150
>gi|297617508|ref|YP_003702667.1| XRE family transcriptional regulator [Syntrophothermus lipocalidus
DSM 12680]
gi|297145345|gb|ADI02102.1| transcriptional regulator, XRE family [Syntrophothermus lipocalidus
DSM 12680]
Length = 314
Score = 40.4 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 44/120 (36%), Gaps = 15/120 (12%)
Query: 32 PIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGP------VFVGVYHRFKYFDSHP 85
P+ + + ++ + + S+ A GP V +G+ + F +
Sbjct: 182 PLSKTALMKHLWFSDFRCFRETSTSISGALYAALPHGPALHKWEVLLGIAQD-RGFVNIE 240
Query: 86 IEVIMDLSFRI-------FPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRL 138
+E + + + + EIM + +++Q S +L EI +E W++
Sbjct: 241 VEYLGEFEVEMVRAAREFDGSVFTPTEIEIMGEVKSEFQGLSARELSEISHKEE-AWKKT 299
>gi|15838036|ref|NP_298724.1| hypothetical protein XF1435 [Xylella fastidiosa 9a5c]
gi|9106450|gb|AAF84244.1|AE003973_12 hypothetical protein XF_1435 [Xylella fastidiosa 9a5c]
Length = 50
Score = 40.4 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 5/23 (21%), Positives = 13/23 (56%)
Query: 40 QFIYLTHCDVVLQKKKSMLDEEP 62
+ +Y+ H + +K+ ++DE
Sbjct: 3 KLVYIAHAWHLGFRKQPLIDEHV 25
>gi|110597223|ref|ZP_01385511.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM
13031]
gi|110341059|gb|EAT59527.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM
13031]
Length = 182
Score = 40.0 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 18/48 (37%)
Query: 37 KIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSH 84
K+ + +Y + + ++ +++ A GPV Y K
Sbjct: 30 KVFKILYFADQKHLARYGSAITEDKYIAMTYGPVPSMAYDIVKSIRGD 77
>gi|307579695|gb|ADN63664.1| hypothetical protein XFLM_08860 [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 50
Score = 40.0 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 5/25 (20%), Positives = 14/25 (56%)
Query: 38 IQQFIYLTHCDVVLQKKKSMLDEEP 62
+ + +Y+ H + +K+ ++DE
Sbjct: 1 MLKLVYIAHAWHLGFRKQPLIDEHV 25
>gi|71275020|ref|ZP_00651308.1| conserved hypothetical protein [Xylella fastidiosa Dixon]
gi|71164752|gb|EAO14466.1| conserved hypothetical protein [Xylella fastidiosa Dixon]
Length = 50
Score = 40.0 bits (92), Expect = 0.48, Method: Composition-based stats.
Identities = 5/25 (20%), Positives = 14/25 (56%)
Query: 38 IQQFIYLTHCDVVLQKKKSMLDEEP 62
+ + +Y+ H + +K+ ++DE
Sbjct: 1 MLKLVYIAHAWHLRFRKQPLIDEHV 25
>gi|312135992|ref|YP_004003330.1| helix-turn-helix domain-containing protein [Caldicellulosiruptor
owensensis OL]
gi|311776043|gb|ADQ05530.1| helix-turn-helix domain protein [Caldicellulosiruptor owensensis
OL]
Length = 336
Score = 39.6 bits (91), Expect = 0.52, Method: Composition-based stats.
Identities = 15/114 (13%), Positives = 38/114 (33%), Gaps = 14/114 (12%)
Query: 38 IQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG-VYHRFKYFDSH------------ 84
+ ++++ + +S+ + GPV G VY+ + S
Sbjct: 205 LNKYLWYIDFLHFKRYSRSITGLSYIRYTYGPVIKGFVYNEIATYPSDKFFVEEYETEDG 264
Query: 85 PIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRL 138
I+ + QE + + + N + + + E+ +E W++
Sbjct: 265 AIKTSFKSRKNYDLSLFTQEELDTINIVINFLKDKNCRTISELSHQE-LAWQQT 317
>gi|302872688|ref|YP_003841324.1| helix-turn-helix domain protein [Caldicellulosiruptor obsidiansis
OB47]
gi|302575547|gb|ADL43338.1| helix-turn-helix domain protein [Caldicellulosiruptor obsidiansis
OB47]
Length = 336
Score = 39.6 bits (91), Expect = 0.52, Method: Composition-based stats.
Identities = 15/114 (13%), Positives = 38/114 (33%), Gaps = 14/114 (12%)
Query: 38 IQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG-VYHRFKYFDSH------------ 84
+ ++++ + +S+ + GPV G VY+ + S
Sbjct: 205 LNKYLWYIDFLHFKRYSRSITGLSYIRYTYGPVIKGFVYNEIATYPSDKFFVEEYETEDG 264
Query: 85 PIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRL 138
I+ + QE + + + N + + + E+ +E W++
Sbjct: 265 AIKTSFKSRKNYDLSLFTQEELDTINIVINFLKDKNCRTISELSHQE-LAWQQT 317
>gi|225621476|ref|YP_002722735.1| hypothetical protein BHWA1_02578 [Brachyspira hyodysenteriae WA1]
gi|225216297|gb|ACN85031.1| hypothetical protein BHWA1_02578 [Brachyspira hyodysenteriae WA1]
Length = 177
Score = 39.6 bits (91), Expect = 0.59, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 51/127 (40%), Gaps = 16/127 (12%)
Query: 18 VANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV------- 70
+ ++ I+ + +K+ + ++ + CD+ ++K K++ +++ + GPV
Sbjct: 14 IVHYIINSCD-DIRKLGSIKLNKILFYSDCDMFIRKNKTITNDKYIKRQYGPVPKKILTI 72
Query: 71 FVGVYHRFKYFDSHPIEVIM-------DLSFRIFPKIANQEIGEIMESIWNKYQ-SHSTE 122
+ + K P + + L+ + I E I+E +++ +
Sbjct: 73 LSNLEKKKKISIRKPSQNRLYDTTLYFSLTDDMDLDILTAEEVSILEHYLKIISNNYTAK 132
Query: 123 QLQEIVQ 129
++ EI
Sbjct: 133 EISEISH 139
>gi|160914791|ref|ZP_02077005.1| hypothetical protein EUBDOL_00798 [Eubacterium dolichum DSM 3991]
gi|158433331|gb|EDP11620.1| hypothetical protein EUBDOL_00798 [Eubacterium dolichum DSM 3991]
Length = 98
Score = 39.6 bits (91), Expect = 0.59, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 28/75 (37%), Gaps = 16/75 (21%)
Query: 13 YSTIAVANFFI---------DKGVKYSIPID----HLKIQQFIYLTHCDVVLQKKKSMLD 59
Y + +A +F+ +K + I ++++ +F++ + + ++
Sbjct: 6 YKALDIAKWFLLNDVDKTLFNKELTSKNGITFCEENVRLNKFLFFVQNIHIAKYG---IN 62
Query: 60 EEPQAWKQGPVFVGV 74
E + G V V
Sbjct: 63 ERFYEYDDGAVVEEV 77
>gi|146297451|ref|YP_001181222.1| helix-turn-helix domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145411027|gb|ABP68031.1| helix-turn-helix domain protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 341
Score = 39.2 bits (90), Expect = 0.82, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 39/114 (34%), Gaps = 14/114 (12%)
Query: 38 IQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVG-VYHRFKYF--DSHPIEVIMDLSF 94
+ +F++ + +S+ + GPV Y + D + IE
Sbjct: 206 LNKFLWYIDFMHFKRCLRSIPGLRYIKYAYGPVIEKFAYKEIAAYPSDKYTIEEYETPDG 265
Query: 95 RIFPKIANQ----------EIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRL 138
I KI ++ E E + + + + + + E+ +E W++
Sbjct: 266 AIQTKIKSKGNYDLSVFTPEELETINMVIDALKDKTCSAISELSHKEVG-WQQT 318
>gi|322830134|gb|EFZ33267.1| mitogen-activated protein kinase, putative [Trypanosoma cruzi]
Length = 406
Score = 38.9 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 23/194 (11%), Positives = 54/194 (27%), Gaps = 29/194 (14%)
Query: 16 IAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVL---QKKKSMLDEEPQAWKQGPVFV 72
IA+ +F + + H Y+TH + + W G V
Sbjct: 172 IAICDFNLAREDTQDQNKTH-------YVTHRWYRAPELVMQFKGFTKLVDIWSAGCVMG 224
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+++R F +D + ++++ + Y + +
Sbjct: 225 ELFNRKALFRGSTFYNQLDKIVEVVGTPNDEDLKMFSSAQARDYLH------SSLSHCKK 278
Query: 133 KTWRRLYDPNDPN-------------TNRTITVEEITKMADGSNISPENVVEQIKKPVRF 179
+ W+ + D T R + + S P ++ E +P F
Sbjct: 279 RPWQDVVPNADEVALDLLSRMLEFNPTRRITAEQALQHPYFASLYDPLDLTEACSEPFHF 338
Query: 180 DSDSEFATLESQLV 193
++ + +
Sbjct: 339 SDVNDITKMHEMFI 352
>gi|115399490|ref|XP_001215334.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192217|gb|EAU33917.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 163
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Query: 93 SFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPNDPN-----TN 147
SF+ + + ++ + N+Y +++ +L+ + K D ++P TN
Sbjct: 2 SFKAKNLSYDAKEPAFLQRLRNQYGNNTG-RLERPMTRPRKPKDANVDDDEPTYVDEETN 60
Query: 148 RTITVEEITKMADGSNISPENVVEQIKKPVRFDSDSEFAT 187
I+ EE + S E E + P R D D + T
Sbjct: 61 EVISKEEYEALVRAEETSKEGPAEDGETPSRVDQDGKSTT 100
>gi|222149380|ref|YP_002550337.1| hypothetical protein Avi_9916 [Agrobacterium vitis S4]
gi|221737238|gb|ACM38201.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 203
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 29/82 (35%), Gaps = 1/82 (1%)
Query: 2 KKRTFTQTNPPYS-TIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDE 60
KK NP +A ++ I + S + + ++L + + + + +
Sbjct: 14 KKAEVVAVNPDLERVLAAVSYVIFTAQRKSKKPTQYDVVKSLFLADRTHLNKYGRLVSSD 73
Query: 61 EPQAWKQGPVFVGVYHRFKYFD 82
A K GPV Y+ K
Sbjct: 74 RYVAMKHGPVPSTAYNVLKNDG 95
>gi|146173942|ref|XP_001019205.2| hypothetical protein TTHERM_00997650 [Tetrahymena thermophila]
gi|146144816|gb|EAR98960.2| hypothetical protein TTHERM_00997650 [Tetrahymena thermophila
SB210]
Length = 468
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 67/139 (48%), Gaps = 14/139 (10%)
Query: 106 GEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKMADGSNIS 165
EI+ +I ++ + + +EIVQ+ W++ ++ N P T + + ++ K+A G N+
Sbjct: 2 EEILSNILESKKTKTLREYEEIVQKSGMIWKKSFEYNTPITGQ-VNFDDFFKIA-GKNV- 58
Query: 166 PENVVEQIKKPVRFDSDSEFA--------TLESQLVKGFKSMPPQLTK--EFQEAQVQIK 215
+ V + I K + E+ T+ ++V+GF+ M PQ +F E +++
Sbjct: 59 -QKVCKFIVKCIDRGDSIEYVRSVQFFYKTVSGEIVEGFQQMHPQAPSKGKFAEKIFELE 117
Query: 216 KDSAIARSIQESNIMRFAY 234
D I + I + + A+
Sbjct: 118 DDEYIIKMIGRTGLFLDAF 136
>gi|194336319|ref|YP_002018113.1| hypothetical protein Ppha_1224 [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308796|gb|ACF43496.1| conserved hypothetical protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 183
Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 60/185 (32%), Gaps = 32/185 (17%)
Query: 10 NPPYSTIAVA-NFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQG 68
N P IA+ N + K D K+ + +Y + + ++ D+ A G
Sbjct: 2 NSPAEKIAITVNTLLYIIQKSGGICDFHKVFKILYFADQKHLSRYGSAITDDTYIAMANG 61
Query: 69 PVFVGVYHRFKY------FDSHPIEVIMDLSFRI------------FPKIANQEIGEIME 110
PV Y K F S + +I ++ E+ I E
Sbjct: 62 PVPSMAYDILKSLRGEGLFTSQKEQFTPYFELQINKHTVKAKKSPDLDYLSESEMRCIDE 121
Query: 111 SIWNKYQSHSTEQLQEIVQEENKTWRRLYDPNDPNTNRTITVEEITKMADGSNISPENVV 170
SI Y L E + W++ N I + ++ K N +++
Sbjct: 122 SIEENY-HLKFSDLTEKSH--DTAWQKAVF------NSEIDLLDVAKCGGAGN----DMI 168
Query: 171 EQIKK 175
E IK+
Sbjct: 169 EYIKE 173
>gi|114567932|ref|YP_755086.1| hypothetical protein Swol_2426 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114338867|gb|ABI69715.1| hypothetical protein Swol_2426 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 336
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 41/113 (36%), Gaps = 10/113 (8%)
Query: 28 KYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAW-KQGPVFVGVYHR-FKYFDSHP 85
K P+ + + ++ + ++ L GPV Y + D
Sbjct: 202 KSGDPVYETGMNKLLWYVDMLCYKRSQRQALTGLCYKHNIYGPV-PLWYSYLYGSLDDVY 260
Query: 86 IEVIMDLSFRIFPKIAN-------QEIGEIMESIWNKYQSHSTEQLQEIVQEE 131
I ++ D +A+ + +++E++ N ++ S +++ + +E
Sbjct: 261 ITLVEDKYGTQIGALADFSTDVFSDDELDVLETVANNFKGWSAKKISQYSHQE 313
>gi|332292026|ref|YP_004430635.1| A/G-specific adenine glycosylase [Krokinobacter diaphorus 4H-3-7-5]
gi|332170112|gb|AEE19367.1| A/G-specific adenine glycosylase [Krokinobacter diaphorus 4H-3-7-5]
Length = 351
Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 31/98 (31%), Gaps = 15/98 (15%)
Query: 24 DKGVKYSIPIDHLKI-QQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYF- 81
D + LK+ Q Y + + + +++E G VF Y K
Sbjct: 60 DLANATEEEV--LKLWQGLGYYSRGRNLHASAQIIVNE------HGGVFPNTYEEIKKLK 111
Query: 82 --DSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQ 117
+ I +SF + + + ++ + Y
Sbjct: 112 GVGDYTASAIASISFNEPTAVVDGNVYRVLSRV---YG 146
>gi|110639844|ref|YP_680054.1| hypothetical protein CHU_3477 [Cytophaga hutchinsonii ATCC 33406]
gi|110282525|gb|ABG60711.1| hypothetical protein CHU_3477 [Cytophaga hutchinsonii ATCC 33406]
Length = 176
Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 11/115 (9%)
Query: 36 LKIQQFIYLTHCDVVLQKKKSMLD--EEPQAWKQGPVFVGVYHR-----FKYFDSHPIEV 88
LK+ + + ++ +L+ ++ A G V VY F S+ +
Sbjct: 37 LKVLKLNFFAAAVNANKENNGLLNIFDKFHAMPYGHVESEVYENLNNLNFFSVSSNKTTI 96
Query: 89 IMDLSFRIFPKIANQEIGEIMESIW---NKYQSHSTEQLQEIVQEENKTWRRLYD 140
+ F + EI +ES+ N +S L E+ WR ++
Sbjct: 97 NNNPDFEKLKQETRSEINFAIESLKKENNNLIKYSAMDLVELSHTYFS-WRASFN 150
>gi|223935989|ref|ZP_03627903.1| conserved hypothetical protein [bacterium Ellin514]
gi|223895211|gb|EEF61658.1| conserved hypothetical protein [bacterium Ellin514]
Length = 198
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 12/116 (10%), Positives = 38/116 (32%), Gaps = 17/116 (14%)
Query: 38 IQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGP---------VFVGVYHRFKYFDSHPIEV 88
+ + +Y L+ K + + + GP + + K + P+E
Sbjct: 47 LNKVLYYIDHVHYLKHGKKLTGFKYIKQRLGPTPKPSEFLPIRESLIDNEKINEK-PVEF 105
Query: 89 IMDLSFRIFPKIANQ------EIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRL 138
+ R+ + +++++ + + + + ++ EE W+
Sbjct: 106 FGRVQKRLSALTEPDLKGFTVDEISLIDNVISALSPFNGKAISDVTHEELS-WKFA 160
>gi|226377680|ref|YP_002790729.1| hypothetical protein lb338_phage_50 [Lactobacillus phage Lb338-1]
gi|225921458|gb|ACO36971.1| hypothetical protein lb338_phage_50 [Lactobacillus phage Lb338-1]
Length = 160
Score = 37.7 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 39/128 (30%), Gaps = 27/128 (21%)
Query: 34 DHLKIQQFIYLTHCDVVLQKK----------------KSMLDEEPQAWKQGPVFVGVYHR 77
LK+Q+ +Y +S+ +A GPV V +
Sbjct: 25 TMLKVQKSLYFLWAYYAGTYGSLLSKGGLDISKEDYPESLFKGNFKALMYGPVDTDVLKK 84
Query: 78 FKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQ---LQEIVQEENKT 134
K ++ + + EI E+M + + + L E+N
Sbjct: 85 QKE------NFYSKDKWKGYTPKGSSEI-EVMGFVNDLLGQINAVNDFGLINRCHEDNC- 136
Query: 135 WRRLYDPN 142
W++ Y+
Sbjct: 137 WKQAYENG 144
>gi|332667375|ref|YP_004450163.1| XRE family transcriptional regulator [Haliscomenobacter hydrossis
DSM 1100]
gi|332336189|gb|AEE53290.1| transcriptional regulator, XRE family [Haliscomenobacter hydrossis
DSM 1100]
Length = 323
Score = 37.3 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 47/120 (39%), Gaps = 19/120 (15%)
Query: 33 IDHLKIQ--QFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIM 90
+ K Q + ++ + +S+ + +A + GPV + F + VI+
Sbjct: 185 LSPFKTQMNKLLFYADFHHFRKHGRSISGAKYRAIEMGPV-PNNFDAIFQFAENEGFVIL 243
Query: 91 D--------LSFRIFPKIA-------NQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTW 135
D + + FP A + E ++ + ++++ ++ + ++ EEN W
Sbjct: 244 DHHEFPNGAIGTKFFPNPAAKIEDYLTELELESLKEVLERFRNVKSQDIIQLSHEEN-AW 302
>gi|257889232|ref|ZP_05668885.1| predicted protein [Enterococcus faecium 1,231,410]
gi|257825592|gb|EEV52218.1| predicted protein [Enterococcus faecium 1,231,410]
Length = 225
Score = 37.3 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 36 LKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVY----HRFKYFDSHPIEVIMD 91
LK+Q+F++ + + + +K GPV+ VY +R + F + E+I
Sbjct: 27 LKLQKFLFFYEIFNYSL-DNEIHLDYLKGYKNGPVYSDVYGDYTYRMEEFQTKLEEIISG 85
Query: 92 LSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPNDPNTNRTIT 151
+ ++ + +I + S +L E+ E + W+ + + +
Sbjct: 86 VKDKVALNVFEPVNEDIAKKAAFLVSVLSKSELSELSHEFDI-WKNKEARIESGE-KQVK 143
Query: 152 VEEITKMADGSNISPENVVEQIKKPVRFDSDSEFATLESQLVKGFKSMPPQLTKEFQEAQ 211
+E + +++ E + + D+ + E++ + KS Q+T E +E
Sbjct: 144 LELEDLSSKDKSLAKE--LYDLYSLDFIDNSFVISVNETKFIID-KSQRSQVTSELEEVL 200
Query: 212 VQIKK---DSAIARSIQESNIM 230
+I K D+ + SI++ I+
Sbjct: 201 EEISKEEEDNPVYISIEDGVIV 222
>gi|323703996|ref|ZP_08115620.1| acyl-ACP thioesterase [Desulfotomaculum nigrificans DSM 574]
gi|323531039|gb|EGB20954.1| acyl-ACP thioesterase [Desulfotomaculum nigrificans DSM 574]
Length = 250
Score = 37.3 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 41/116 (35%), Gaps = 18/116 (15%)
Query: 14 STIAVANFFIDKGVKY----SIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEE--PQAWKQ 67
+ +AV N+ + V + + I LK Q ++ + + ++ + +E+ + W
Sbjct: 24 TPVAVLNYLEETAVAHSESVGVGISKLKSQGVAWMLNRWHIKMERYPLWNEKIVIETW-- 81
Query: 68 GPVFVGVYHRFKYFDSHPIEVIMD------LSFRIFPKIANQEIGEIMESIWNKYQ 117
+ RF I D S +F I + I + I + Y
Sbjct: 82 ----PSRFERFYATREFNIRDSHDHIIGRASSLWVFLNIEKKRPLRIPDKIKDAYG 133
>gi|18312390|ref|NP_559057.1| hypothetical protein PAE1074 [Pyrobaculum aerophilum str. IM2]
gi|18159843|gb|AAL63239.1| hypothetical protein PAE1074 [Pyrobaculum aerophilum str. IM2]
Length = 184
Score = 37.3 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 47/138 (34%), Gaps = 32/138 (23%)
Query: 13 YSTIAVANFFIDK-GVKYSIPIDHLKIQQFIYLTHCDV-----------VLQKKKSMLDE 60
Y V + + + G I K+ + ++L + L + + +
Sbjct: 3 YRVEDVVYYVVKRLGEVNGIK----KLMKLVFLLQYEARPRLGRRIVVKYLYEGQPVARS 58
Query: 61 EPQAWKQGPVFVGVYHRFKYFDSHP-----------IEVIMDLSFRIFPKIANQEIGEIM 109
E W GP+ VY + ++ I + +F + P +A + +
Sbjct: 59 EFYIWSFGPMSNEVYDAVEALENEGLLETSLGDYIKIITKGEKAFELPPPVARR-----V 113
Query: 110 ESIWNKYQSHSTEQLQEI 127
+ + +Y +L+++
Sbjct: 114 DEVAERYGRCRGWELEKV 131
>gi|260662220|ref|ZP_05863116.1| CRISPR associated protein [Lactobacillus fermentum 28-3-CHN]
gi|260553603|gb|EEX26495.1| CRISPR associated protein [Lactobacillus fermentum 28-3-CHN]
Length = 1313
Score = 36.9 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 18/149 (12%)
Query: 92 LSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDPNDPNTNRTIT 151
LS ++ I ++ I++ +WN + + +IV + + TN +T
Sbjct: 627 LSKKLLTGIVDENGQRIIDLMWN-----TDQNFMQIVNQPVFKEQIDQLNQKAITNDGMT 681
Query: 152 VEE-ITKMADGSNISPEN---------VVEQIKKPVRFDSDS---EFATLESQLVKGFKS 198
+ E + + DG+ SP+N VVE I K V S EFA E + +S
Sbjct: 682 LREWVESVLDGAYTSPQNKKAIWQVVRVVEDIVKAVGNAPKSISIEFARNEGNKGEITRS 741
Query: 199 MPPQLTKEFQEAQVQIKKDSAIARSIQES 227
QL K F++ ++ KD+++ ++++
Sbjct: 742 RRTQLQKLFEDQAHELVKDTSLTEELEKA 770
>gi|67921327|ref|ZP_00514846.1| conserved hypothetical protein [Crocosphaera watsonii WH 8501]
gi|67857444|gb|EAM52684.1| conserved hypothetical protein [Crocosphaera watsonii WH 8501]
Length = 441
Score = 36.9 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAW 65
Y+ I VA+ +I+ G + PI L + Y + +V + QAW
Sbjct: 332 YNHIGVADAYINDGKEGKKPITPLTNSKPTYWLYHEVWRLTGIRSFRD-FQAW 383
>gi|255280461|ref|ZP_05345016.1| toxin-antitoxin system, antitoxin component, Xre family [Bryantella
formatexigens DSM 14469]
gi|255268926|gb|EET62131.1| toxin-antitoxin system, antitoxin component, Xre family [Bryantella
formatexigens DSM 14469]
Length = 326
Score = 36.9 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 15/138 (10%), Positives = 41/138 (29%), Gaps = 34/138 (24%)
Query: 14 STIAVANFFIDKGVKYSIPIDHL---KIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV 70
+ V +F + +L K+ + ++ ++ ++ QA G V
Sbjct: 181 KAVDVMRYFAASAH-----VTNLYKVKLMKLMWYADALSYKKRGFAITGLVYQALPMGAV 235
Query: 71 FVGVYHRFKYFDSHPIEVIMDLSFR-----------------IFPKIANQEIGEIMESIW 113
+ I + D+ + ++E I++++
Sbjct: 236 ---------PVGHNSIIDLKDVPCEEVDMGETNAYHFSLKGDVSFPFLSREDKGILDTVI 286
Query: 114 NKYQSHSTEQLQEIVQEE 131
K S ++ + +E
Sbjct: 287 EKLGKMSKNEIISFMHKE 304
>gi|70943447|ref|XP_741769.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56520357|emb|CAH81098.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 438
Score = 36.9 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 41/107 (38%), Gaps = 11/107 (10%)
Query: 13 YSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFV 72
Y++ + N ++ +I +H K +I K K + + + P+
Sbjct: 185 YNSEKINNMITEEEFISNITCNHCK-NLYIEYIQKKNYNLKTKILFFKFLSKFYYPPLLT 243
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSH 119
V + +K DLS+ I K +++G+ + I Y+ +
Sbjct: 244 DVLNLYKK----------DLSYDIELKGTKEDLGKFVLDILENYKDY 280
>gi|160902673|ref|YP_001568254.1| helix-turn-helix domain-containing protein [Petrotoga mobilis SJ95]
gi|160360317|gb|ABX31931.1| helix-turn-helix domain protein [Petrotoga mobilis SJ95]
Length = 339
Score = 36.6 bits (83), Expect = 4.2, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 87 EVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQ 129
+ L + + E +I+E I KY S +L E+
Sbjct: 281 TYKIGLVDQTPLRNLTDEERKIVEKIVKKYGGLSASELVEVSH 323
>gi|257457466|ref|ZP_05622634.1| nucleoside diphosphate kinase [Treponema vincentii ATCC 35580]
gi|257445089|gb|EEV20164.1| nucleoside diphosphate kinase [Treponema vincentii ATCC 35580]
Length = 147
Score = 36.6 bits (83), Expect = 4.2, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 1/70 (1%)
Query: 3 KRTFTQTNPPYSTIAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQK-KKSMLDEE 61
+RTF P +A + + K + + LK+ + + K E
Sbjct: 2 ERTFVMMKPGVVQRRIAGEVLSRFEKKGLKLVALKLMRISPELAKKHYAEHADKPFFGEL 61
Query: 62 PQAWKQGPVF 71
Q GPV
Sbjct: 62 VQYITSGPVI 71
>gi|171185579|ref|YP_001794498.1| hypothetical protein Tneu_1121 [Thermoproteus neutrophilus V24Sta]
gi|170934791|gb|ACB40052.1| conserved hypothetical protein [Thermoproteus neutrophilus V24Sta]
Length = 188
Score = 36.6 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 11/136 (8%), Positives = 35/136 (25%), Gaps = 47/136 (34%)
Query: 37 KIQQFIYLTHCD--------VVLQKKKSMLDEEPQAWKQGPVFVGV-----------YHR 77
K+Q+ ++L + W GP V Y
Sbjct: 30 KVQKLMFLVEHWDGGRGVSRSLGLTGY-----GFVVWLYGPYSPQVDEDLEWLVEEGYIS 84
Query: 78 FKYFDSHPIEVIM-DLSFRIFPKIANQEIGEI----------------------MESIWN 114
+ + ++ D + + ++ ++++ +
Sbjct: 85 ERVYGYDSYHSVVADGEVVRLGFYDDDKSPKVIYVYRPTWRARFVRVEEKLRARIDAVVD 144
Query: 115 KYQSHSTEQLQEIVQE 130
K+ ++ +L+ +
Sbjct: 145 KFGRYTANELEILTTA 160
>gi|71406153|ref|XP_805636.1| mitogen-activated protein kinase [Trypanosoma cruzi strain CL
Brener]
gi|70869124|gb|EAN83785.1| mitogen-activated protein kinase, putative [Trypanosoma cruzi]
Length = 406
Score = 36.6 bits (83), Expect = 4.4, Method: Composition-based stats.
Identities = 23/194 (11%), Positives = 54/194 (27%), Gaps = 29/194 (14%)
Query: 16 IAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVL---QKKKSMLDEEPQAWKQGPVFV 72
IA+ +F + + H Y+TH + + W G V
Sbjct: 172 IAICDFNLAREDTQDQNKTH-------YVTHRWYRAPELVMQFKGFTKLVDIWSAGCVMG 224
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+++R F +D + ++++ + Y + +
Sbjct: 225 ELFNRKALFRGSTFYNQLDKIVEVVGTPNDEDLKMFSSAQARDYLH------SSLSHCKK 278
Query: 133 KTWRRLYDPNDPN-------------TNRTITVEEITKMADGSNISPENVVEQIKKPVRF 179
+ W+ + D T R + + S P ++ E +P F
Sbjct: 279 RPWQDVVPNADEVALDLLSRMLEFNPTRRITAEQALQHPYFVSLYDPLDLTEARSEPFHF 338
Query: 180 DSDSEFATLESQLV 193
++ + +
Sbjct: 339 SDVNDITKMHEMFI 352
>gi|295695551|ref|YP_003588789.1| helix-turn-helix domain-containing protein [Bacillus tusciae DSM
2912]
gi|295411153|gb|ADG05645.1| helix-turn-helix domain-containing protein [Bacillus tusciae DSM
2912]
Length = 328
Score = 36.6 bits (83), Expect = 5.1, Method: Composition-based stats.
Identities = 14/129 (10%), Positives = 38/129 (29%), Gaps = 18/129 (13%)
Query: 22 FIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRF--- 78
+ + + + ++++ + + ++ GPV YH
Sbjct: 183 VVRLIAENAGKLSKSVFLKYLFYIDFLNLKWHGEPLMGLAYVKNHYGPVPR--YHGLLLE 240
Query: 79 -----KYFDSHPIEV---IMDLSFRIFP----KIANQEIGEIMESIWNKYQSHSTEQLQE 126
IE I+ P + + ++++ + + + E++ E
Sbjct: 241 YLEASGAIRREEIERGGEIVGEYVEGLPVERAEPLEEHERDVVDYVIETLKGMNAERISE 300
Query: 127 IVQEENKTW 135
EE W
Sbjct: 301 FSHEE-PAW 308
>gi|320105381|ref|YP_004180971.1| permease [Terriglobus saanensis SP1PR4]
gi|319923902|gb|ADV80977.1| permease [Terriglobus saanensis SP1PR4]
Length = 884
Score = 36.6 bits (83), Expect = 5.2, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 175 KPVRFDSDSEFATLESQLVKGFKSMPPQLTKEFQEAQVQIKKDSAIARSIQES 227
+PVR D+ E++ KGFK +P ++ + F + ++++ SA S+QES
Sbjct: 300 EPVRAKLDAVSRGFETERAKGFKDIPKKMIQNFLDQRMEMIPASAGTSSLQES 352
>gi|71414500|ref|XP_809350.1| mitogen-activated protein kinase [Trypanosoma cruzi strain CL
Brener]
gi|70873718|gb|EAN87499.1| mitogen-activated protein kinase, putative [Trypanosoma cruzi]
Length = 406
Score = 36.6 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 23/194 (11%), Positives = 54/194 (27%), Gaps = 29/194 (14%)
Query: 16 IAVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVL---QKKKSMLDEEPQAWKQGPVFV 72
IA+ +F + + H Y+TH + + W G V
Sbjct: 172 IAICDFNLAREDTQDQNKTH-------YVTHRWYRAPELVMQFKGFTKLVDIWSAGCVMG 224
Query: 73 GVYHRFKYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEEN 132
+++R F +D + ++++ + Y + +
Sbjct: 225 ELFNRKALFRGSTFYNQLDKIVEVVGTPNDEDLKMFSSAQARDYLH------SSLSHCKK 278
Query: 133 KTWRRLYDPNDPN-------------TNRTITVEEITKMADGSNISPENVVEQIKKPVRF 179
+ W+ + D T R + + S P ++ E +P F
Sbjct: 279 RPWQDVVPSADEVALDLLSRMLEFNPTRRITAEQALQHPYFVSLYDPLDLTEARSEPFHF 338
Query: 180 DSDSEFATLESQLV 193
++ + +
Sbjct: 339 SDVNDITKMHEMFI 352
>gi|327285442|ref|XP_003227442.1| PREDICTED: uncharacterized protein C9orf24 homolog [Anolis
carolinensis]
Length = 287
Score = 36.2 bits (82), Expect = 5.6, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 6/123 (4%)
Query: 59 DEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSFRIFPKIA--NQEIGEIMESIWNKY 116
D+ W+ GP ++R+ + + S PK N E++ ++ N
Sbjct: 104 DDRYATWRTGPYNSAGWNRYTTYLPRIPKESGMESILRPPKPERLNNYEREVVVNMLN-- 161
Query: 117 QSHSTEQLQEIVQEENKTWRRLYDP-NDPNTNRTITVEEITKMADGSNISPENVVEQIKK 175
S S +QL + R Y P T R + + DG+ + + + ++K
Sbjct: 162 -SLSRKQLPSLQHHYTVPGRMPYQGYYSPCTGRHYCLRGMDYYVDGAPNNERQISQLVEK 220
Query: 176 PVR 178
VR
Sbjct: 221 IVR 223
>gi|301617173|ref|XP_002938021.1| PREDICTED: transient receptor potential cation channel subfamily V
member 4-like [Xenopus (Silurana) tropicalis]
Length = 759
Score = 36.2 bits (82), Expect = 6.0, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 6/95 (6%)
Query: 32 PIDHL----KIQQFIYLTHCDVVLQKKKSM--LDEEPQAWKQGPVFVGVYHRFKYFDSHP 85
+ L K+ + H K + L + Q WK GPV+ +Y
Sbjct: 326 EMTPLMMAAKLGKIGIFQHIIQREIKDEEACHLSRKFQGWKYGPVYSSLYDMSMLDSVLE 385
Query: 86 IEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHS 120
V + +A + I EI++ W K+ + S
Sbjct: 386 TLVYKSTAENRHEMLAVEPINEILKDKWKKFGAVS 420
>gi|308273303|emb|CBX29906.1| hypothetical protein N47_F16010 [uncultured Desulfobacterium sp.]
Length = 173
Score = 36.2 bits (82), Expect = 6.4, Method: Composition-based stats.
Identities = 12/114 (10%), Positives = 37/114 (32%), Gaps = 12/114 (10%)
Query: 38 IQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYHRFKYFDSHPIEVIMDLSF--- 94
+ + +Y + + ++ ++ K GP + + + + D F
Sbjct: 35 LYKLLYFMDFNFYEKYEEQLIGATYIKNKYGPTPKEFVKIIEEMEGKDLVKVKDSYFKYP 94
Query: 95 --RIFPKIANQEI------GEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYD 140
+ P + E+++ + N + + ++ E + W+ D
Sbjct: 95 QTKYLPLRKSDLTQLKAHEKEVIDDVLNTLSNMNASEISEYSHN-DVPWKTTED 147
>gi|270265280|ref|ZP_06193541.1| hypothetical protein SOD_m00120 [Serratia odorifera 4Rx13]
gi|270040684|gb|EFA13787.1| hypothetical protein SOD_m00120 [Serratia odorifera 4Rx13]
Length = 191
Score = 36.2 bits (82), Expect = 6.5, Method: Composition-based stats.
Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 45/208 (21%)
Query: 17 AVANFFIDKGVKYSIPIDHLKIQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPVFVGVYH 76
+A + + K + +LK+ + +YL+ D +++ + M ++ + + GP+
Sbjct: 9 QMAAYLLLKSDGR---MAYLKLMKLLYLSDRDYLIKYGELMSGDKLYSMRFGPILSETLD 65
Query: 77 RFK---YFDSHPIEVIM---DLSFRIFPKIA-----NQEIGEI-------MESIWNKYQS 118
K E + D + P++ +E+GE+ ++ +++ Y
Sbjct: 66 LIKNVNKVGGDDWEKFIIRDDKDVHLNPRLGGAFDWEEELGELSRADVKTLDGVFDNYGH 125
Query: 119 HSTEQLQEIVQ-EENKT-WRRLYDPNDPNTNRTITVEEITKMADGSNISPENVVEQIKKP 176
+ L + +E WR P I +I + S +N++E ++
Sbjct: 126 YYKFDLANLTHLKEICPEWRNPGRSRLP-----IFKRDILLYSGKSEREADNILENMR-- 178
Query: 177 VRFDSDSEFATLESQLVKGFKSMPPQLT 204
ES ++KGF + QLT
Sbjct: 179 ------------ESNILKGFSA---QLT 191
>gi|284103426|ref|ZP_06386091.1| conserved hypothetical protein [Candidatus Poribacteria sp. WGA-A3]
gi|283830260|gb|EFC34502.1| conserved hypothetical protein [Candidatus Poribacteria sp. WGA-A3]
Length = 255
Score = 35.8 bits (81), Expect = 7.5, Method: Composition-based stats.
Identities = 11/133 (8%), Positives = 41/133 (30%), Gaps = 22/133 (16%)
Query: 38 IQQFIYLTHCDVVLQKKKSMLDEEPQAWKQGPV----------------FVGVYHRFKYF 81
+ + +Y D + +++++ GP GV ++ +
Sbjct: 117 LHKLLYFIDFDYYEKFEENLMGATYIKNHHGPTSVELGKILQDMQKHGEIEGVNSQYFKY 176
Query: 82 DSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHSTEQLQEIVQEENKTWRRLYDP 141
+ + I + E ++ + + + ++++ E+ W+
Sbjct: 177 GQKKYLPLKRPNLAIL----SARDVEHIDGVLARLSDKNAKEIELYSH-EDIPWK-SAQD 230
Query: 142 NDPNTNRTITVEE 154
P + ++ +
Sbjct: 231 GQPLSYESVFYRD 243
>gi|301617171|ref|XP_002938020.1| PREDICTED: transient receptor potential cation channel subfamily V
member 4-like [Xenopus (Silurana) tropicalis]
Length = 819
Score = 35.8 bits (81), Expect = 8.0, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 36/102 (35%), Gaps = 6/102 (5%)
Query: 25 KGVKYSIPIDHL----KIQQFIYLTHCDVVLQKKKSM--LDEEPQAWKQGPVFVGVYHRF 78
+ + + L K+ H + K + L + + WK GPV+ +Y
Sbjct: 313 EAILNKEDMTPLMMAAKLGNIGVFQHIIQLEMKDEEARHLSRKFRDWKYGPVYSSLYDLS 372
Query: 79 KYFDSHPIEVIMDLSFRIFPKIANQEIGEIMESIWNKYQSHS 120
I V + +A + I E++ W K+ + S
Sbjct: 373 MLDSVLKILVYKSTAKNRHEMLAVEPINELLNDKWKKFGAVS 414
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.316 0.137 0.412
Lambda K H
0.267 0.0422 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,442,091,024
Number of Sequences: 14124377
Number of extensions: 204666211
Number of successful extensions: 626222
Number of sequences better than 10.0: 542
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 245
Number of HSP's that attempted gapping in prelim test: 624988
Number of HSP's gapped (non-prelim): 850
length of query: 302
length of database: 4,842,793,630
effective HSP length: 138
effective length of query: 164
effective length of database: 2,893,629,604
effective search space: 474555255056
effective search space used: 474555255056
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 81 (35.8 bits)