BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254781014|ref|YP_003065427.1| hypothetical protein
CLIBASIA_04580 [Candidatus Liberibacter asiaticus str. psy62]
         (116 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254781014|ref|YP_003065427.1| hypothetical protein CLIBASIA_04580 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040691|gb|ACT57487.1| hypothetical protein CLIBASIA_04580 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 116

 Score =  241 bits (616), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 116/116 (100%), Positives = 116/116 (100%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP
Sbjct: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPPLPSHH 116
           EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPPLPSHH
Sbjct: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPPLPSHH 116


>gi|315122515|ref|YP_004063004.1| hypothetical protein CKC_03835 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495917|gb|ADR52516.1| hypothetical protein CKC_03835 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 108

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 59/107 (55%), Positives = 77/107 (71%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           MF+I KK FWIS+  IV+SN+Y +  LE T++  +TEI D ++ TSGT+ YASN+CN KP
Sbjct: 1   MFFIFKKVFWISLFFIVISNLYPENSLENTKQNAETEIKDIISLTSGTISYASNICNEKP 60

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNE 107
           E+C LW+K   N K+HTL GAKI Y FAKS L+KNE +S    SK +
Sbjct: 61  ELCSLWEKNFYNFKKHTLKGAKITYKFAKSILKKNEEKSSEFISKQQ 107


>gi|209548486|ref|YP_002280403.1| hypothetical protein Rleg2_0883 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534242|gb|ACI54177.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 164

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           M+++ K  FW  ++L++LS V++    ++   G + +++D  TA SG   Y + +C+ KP
Sbjct: 1   MWFLIKGSFWFGLVLVLLS-VFSTESSDKFASGPQLQLSDAFTAASGAYDYLTGMCSEKP 59

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYP 109
           E+C    + +  +      GA + Y    S   K+E  + A H++ + P
Sbjct: 60  EVCAKGAETLTALGYRAREGAHVAYELLDSQF-KDETPATAKHAEPQMP 107


>gi|222085299|ref|YP_002543829.1| hypothetical protein Arad_1477 [Agrobacterium radiobacter K84]
 gi|221722747|gb|ACM25903.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 153

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/86 (25%), Positives = 52/86 (60%), Gaps = 2/86 (2%)

Query: 1  MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGK-KTEITDFMTATSGTVGYASNLCNAK 59
          M+++ +  FW S++L+ L  ++A+P  +    G+ + +++D ++A SG + Y  ++C+ K
Sbjct: 1  MWFLIRTGFWFSLVLMFLP-IFAKPQGDPRPAGEPQVQVSDALSAASGVMQYVGSMCSEK 59

Query: 60 PEICLLWKKIMRNVKRHTLNGAKIVY 85
          P++CL   + +  +     +GA++ Y
Sbjct: 60 PDVCLKGGETLTALGYQARDGARVAY 85


>gi|116251149|ref|YP_766987.1| hypothetical protein RL1381 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115255797|emb|CAK06878.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 164

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           M+++ K  FW  ++L++LS V++    ++   G + +++D  TA SG   Y + +C+ KP
Sbjct: 1   MWFLIKGSFWFGLVLVLLS-VFSTESSDKLANGPQLQLSDAFTAASGAYDYLTGMCSEKP 59

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYP 109
           E+C    + +  +      GA++ Y    S   K+E  + A  ++ + P
Sbjct: 60  EVCAKGTETLTALGYRAREGARVAYELLDSQF-KDEAPAAAKLAEPQMP 107


>gi|241203747|ref|YP_002974843.1| hypothetical protein Rleg_1009 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240857637|gb|ACS55304.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 164

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 56/109 (51%), Gaps = 2/109 (1%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           M+++ K  FW  ++L++LS V++    ++   G + +++D  TA SG   Y + +C+ KP
Sbjct: 1   MWFLIKGSFWFGLVLVLLS-VFSTESSDKLASGPQLQLSDAFTAASGAYDYLTGMCSEKP 59

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYP 109
           E+C    + +  +      GA++ Y    S   K+E  + A  +  + P
Sbjct: 60  EVCAKGTETLTALGYRAREGARVAYELLDSQF-KDETPATAKLADPQVP 107


>gi|86356891|ref|YP_468783.1| hypothetical protein RHE_CH01251 [Rhizobium etli CFN 42]
 gi|86280993|gb|ABC90056.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 162

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 1/85 (1%)

Query: 1  MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
          M+++ K  FW  ++L++LS V++    ++   G + +++D  TA SG   Y + +C+ KP
Sbjct: 1  MWFLIKGSFWFGLVLVLLS-VFSTENPDQLAGGPQLQLSDAFTAASGAYDYLTGMCSEKP 59

Query: 61 EICLLWKKIMRNVKRHTLNGAKIVY 85
          E+C    + +  +      GA + Y
Sbjct: 60 EVCAKGAETLTALGYRAREGAHVAY 84


>gi|190890964|ref|YP_001977506.1| hypothetical protein RHECIAT_CH0001347 [Rhizobium etli CIAT 652]
 gi|190696243|gb|ACE90328.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 164

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 1/85 (1%)

Query: 1  MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
          M+++ K  FW  ++L++LS V++    ++   G + +++D  TA SG   Y + +C+ KP
Sbjct: 1  MWFLIKGSFWFGLVLVLLS-VFSTEGSDKLASGPQLQLSDAFTAASGAYDYLTGMCSEKP 59

Query: 61 EICLLWKKIMRNVKRHTLNGAKIVY 85
          E+C    + +  +      GA + Y
Sbjct: 60 EVCAKGAETLTALGYRAREGAHVAY 84


>gi|218671799|ref|ZP_03521468.1| hypothetical protein RetlG_09167 [Rhizobium etli GR56]
          Length = 164

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 1/85 (1%)

Query: 1  MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
          M+++ K  FW  ++L++LS V++    ++   G + +++D  TA SG   Y + +C+ KP
Sbjct: 1  MWFLIKGSFWFGLVLVLLS-VFSTEGSDKLASGPQLQLSDAFTAASGAYDYLTGMCSEKP 59

Query: 61 EICLLWKKIMRNVKRHTLNGAKIVY 85
          E+C    + +  +      GA + Y
Sbjct: 60 EVCAKGAETLTALGYRAREGAHVAY 84


>gi|218663388|ref|ZP_03519318.1| hypothetical protein RetlI_30803 [Rhizobium etli IE4771]
          Length = 219

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 1/85 (1%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           M+++ K  FW  ++L++LS V++    ++   G + +++D  TA SG   Y + +C+ KP
Sbjct: 56  MWFLIKGSFWFGLVLVLLS-VFSTEGSDKLASGPQLQLSDAFTAASGAYDYLTGMCSEKP 114

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVY 85
           E+C    + +  +      GA + Y
Sbjct: 115 EVCAKGAETLTALGYRAREGAHVAY 139


>gi|222147977|ref|YP_002548934.1| hypothetical protein Avi_1303 [Agrobacterium vitis S4]
 gi|221734965|gb|ACM35928.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 154

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 1/85 (1%)

Query: 1  MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
          M+++ K  FW +++L+ LS +   P  + +    + E+ + ++A SG   Y S LC  KP
Sbjct: 1  MWFLIKGAFWFTLVLVALSYLGGAP-RDGSASAPQFELANAVSAASGAYDYVSGLCGEKP 59

Query: 61 EICLLWKKIMRNVKRHTLNGAKIVY 85
          ++C+   + ++ +      GA + Y
Sbjct: 60 DVCIKGGQTLQAIGIRAREGALVAY 84


>gi|227821336|ref|YP_002825306.1| hypothetical protein NGR_c07600 [Sinorhizobium fredii NGR234]
 gi|227340335|gb|ACP24553.1| hypothetical protein NGR_c07600 [Sinorhizobium fredii NGR234]
          Length = 143

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 11/95 (11%)

Query: 1  MFWIAKKFFWISVLLIVLSNVYAQPFLEET-----EKGKKTEITDFMTATSGTVGYASNL 55
          M+++ K  FW S++L++L      PFL+ +     E G K EI D  +A +    Y S +
Sbjct: 1  MWFLVKATFWFSLVLVLL------PFLDPSSNAKLENGPKVEIGDTFSAANEAFQYVSAI 54

Query: 56 CNAKPEICLLWKKIMRNVKRHTLNGAKIVYGFAKS 90
          C  KP++C    +    +      GA+I Y F  S
Sbjct: 55 CIQKPDVCEKGAETFVALGHRAREGARIAYEFLDS 89


>gi|150395840|ref|YP_001326307.1| hypothetical protein Smed_0616 [Sinorhizobium medicae WSM419]
 gi|150027355|gb|ABR59472.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
          Length = 139

 Score = 48.9 bits (115), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 11/101 (10%)

Query: 1  MFWIAKKFFWISVLLIVLSNVYAQPFL-----EETEKGKKTEITDFMTATSGTVGYASNL 55
          M+++ K  FW S++L++L      PFL     E+ E G K EI+   +A +    Y S +
Sbjct: 1  MWFLVKATFWFSLVLVLL------PFLDPSSSEKLEHGPKMEISGTFSAANEAFQYISAI 54

Query: 56 CNAKPEICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNE 96
          C  KP++C    +    +      GA+I Y F  S   + +
Sbjct: 55 CVEKPDVCEKGTETFVALGHRAREGARIAYEFLNSQFAEGD 95


>gi|15964754|ref|NP_385107.1| hypothetical protein SMc00456 [Sinorhizobium meliloti 1021]
 gi|307304330|ref|ZP_07584082.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
 gi|307319435|ref|ZP_07598862.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
 gi|7388539|sp|Q52968|Y1001_RHIME RecName: Full=Uncharacterized protein R01001
 gi|15073932|emb|CAC45573.1| Hypothetical protein SMc00456 [Sinorhizobium meliloti 1021]
 gi|306894807|gb|EFN25566.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
 gi|306902798|gb|EFN33391.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
          Length = 145

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 11/92 (11%)

Query: 1  MFWIAKKFFWISVLLIVLSNVYAQPFL-----EETEKGKKTEITDFMTATSGTVGYASNL 55
          M+++ K  FW S++L++L      PFL     E+ E G K EI    +A +  + Y S +
Sbjct: 1  MWFLVKATFWFSLVLVLL------PFLDPSSSEKLEHGPKMEIGGTFSAANEAIQYISAI 54

Query: 56 CNAKPEICLLWKKIMRNVKRHTLNGAKIVYGF 87
          C  KP++C    +    +      GA+I Y F
Sbjct: 55 CVEKPDVCEKGAETFVALGHRAREGARIAYEF 86


>gi|328544567|ref|YP_004304676.1| hypothetical protein SL003B_2949 [polymorphum gilvum SL003B-26A1]
 gi|326414309|gb|ADZ71372.1| hypothetical protein SL003B_2949 [Polymorphum gilvum SL003B-26A1]
          Length = 149

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 11/115 (9%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEE---TEKGKKTEITDFMTATSGTVGYASNLCN 57
           MF++ +  FW++++L+++      PF  +   T + K   I  FM A + TV   S  C 
Sbjct: 1   MFFLLRTAFWLTLVLMLI------PFGSDETSTAEIKVDPIEAFMAAQA-TVSDISTFCT 53

Query: 58  AKPEICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPPL 112
             P+ C    + +  +     +GAKIVY F  ++LE    E+    +  + P PL
Sbjct: 54  RNPQACETGGQALAAIGSRARDGAKIVYEFLDTSLESGSGETQQ-AAAGDMPLPL 107


>gi|642659|gb|AAA74241.1| unknown [Sinorhizobium meliloti]
          Length = 180

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 11/101 (10%)

Query: 1  MFWIAKKFFWISVLLIVLSNVYAQPFL-----EETEKGKKTEITDFMTATSGTVGYASNL 55
          M+++ K  FW S++L++L      PFL     E+ E G K EI    +A +  + Y S +
Sbjct: 1  MWFLVKATFWFSLVLVLL------PFLDPSSSEKLEHGPKMEIGGTFSAANEAIQYISAI 54

Query: 56 CNAKPEICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNE 96
          C  KP++C    +    +      GA+I Y F  +   + +
Sbjct: 55 CVEKPDVCEKGAETFVALGHRAREGARIAYEFLNTQFAEGD 95


>gi|209885751|ref|YP_002289608.1| hypothetical protein OCAR_6631 [Oligotropha carboxidovorans OM5]
 gi|209873947|gb|ACI93743.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
          Length = 178

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 5/116 (4%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           MF++ +  FW+ ++L++L    A     ++EKG +   ++ + A +  V   S  C  +P
Sbjct: 1   MFFLLRMAFWLGLVLVLLPRDPA----PDSEKGPQVSASEAVLAATAAVSDMSQFCTRQP 56

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKN-EYPPPLPSH 115
             C +  +    V      GAK VY F     +K E    A  +   E P   P +
Sbjct: 57  AACAVGGQAASVVGERAQAGAKKVYDFLTEKTDKPEANDKATKADEIEKPQAAPDN 112


>gi|299133493|ref|ZP_07026687.1| conserved hypothetical protein [Afipia sp. 1NLS2]
 gi|298591329|gb|EFI51530.1| conserved hypothetical protein [Afipia sp. 1NLS2]
          Length = 166

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 5/111 (4%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           MF++ +  FW+ ++L++L    A     +T KG +   ++ + A +  V   S  C  +P
Sbjct: 1   MFFLLRMAFWLGLVLVLLPRDKA----PDTNKGPQVSASEAVLAATAAVSDMSQFCTRQP 56

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNER-ESVAIHSKNEYPP 110
             C +  +    V      GAK VY       EKN++ E V    K +  P
Sbjct: 57  AACAVGGQAATVVGERAQAGAKKVYEMLTERSEKNDKPEQVEATEKPQAAP 107


>gi|325292297|ref|YP_004278161.1| hypothetical protein AGROH133_04769 [Agrobacterium sp. H13-3]
 gi|325060150|gb|ADY63841.1| hypothetical protein AGROH133_04769 [Agrobacterium sp. H13-3]
          Length = 160

 Score = 42.0 bits (97), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 2/107 (1%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           M+++ K  FW S++L+ LS  Y     + T++    +I   ++A      Y S +C  KP
Sbjct: 20  MWFLIKGTFWFSLVLVALS--YFGSSNDPTKEPSAFDIPSAVSAAGEAYRYVSAICIEKP 77

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNE 107
           ++C+   +    +      GAK+ Y    + L   ++ + A    +E
Sbjct: 78  DVCVKGAETFHALGERAKEGAKVAYELLDAQLASGDKTAPAAELASE 124


>gi|254504950|ref|ZP_05117101.1| hypothetical protein SADFL11_4989 [Labrenzia alexandrii DFL-11]
 gi|222441021|gb|EEE47700.1| hypothetical protein SADFL11_4989 [Labrenzia alexandrii DFL-11]
          Length = 147

 Score = 41.2 bits (95), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 9/112 (8%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMT--ATSGTVGYASNLCNA 58
           MF++ +  FW++++L+++      P   ETE      I       A   T+      C+ 
Sbjct: 1   MFFLLRTAFWLTLVLVLI------PIGSETESTPVEPINPVSAFIAAQATMSDIGGFCDR 54

Query: 59  KPEICLLWKKIMRNVKRHTLNGAKIVYGFAKSAL-EKNERESVAIHSKNEYP 109
            P+ C      +  +     +GA+IVY +  + + + +  E+V   S N  P
Sbjct: 55  NPQACETGGSALTAIGSRARDGARIVYEYLDTQIADTDPSETVITGSTNVQP 106


>gi|163759053|ref|ZP_02166139.1| hypothetical protein HPDFL43_04795 [Hoeflea phototrophica DFL-43]
 gi|162283457|gb|EDQ33742.1| hypothetical protein HPDFL43_04795 [Hoeflea phototrophica DFL-43]
          Length = 124

 Score = 39.7 bits (91), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 1/98 (1%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           M+++ K  FW S++LI L  V+     E  E     E+   M A          +C  KP
Sbjct: 10  MWFLIKGSFWFSLVLIALP-VFDSGSRETLENAPPLEVGQSMAAAMDAFEDIKQICLRKP 68

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERE 98
           ++C    +    +      GA+I Y F  S     E E
Sbjct: 69  DVCETGSETFAALGIRAKEGARIAYEFLDSKFADGESE 106


>gi|15888258|ref|NP_353939.1| hypothetical protein Atu0920 [Agrobacterium tumefaciens str. C58]
 gi|15155916|gb|AAK86724.1| conserved hypothetical protein [Agrobacterium tumefaciens str.
          C58]
          Length = 141

 Score = 38.9 bits (89), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 8/100 (8%)

Query: 1  MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGT---VGYASNLCN 57
          M+++ K  FW S++L+ LS + +       +  K+    D  +A S       Y S +C 
Sbjct: 1  MWFLIKGTFWFSLVLVALSYIGSS-----NDPAKEPSAFDLPSAVSAAGEAYRYVSAICI 55

Query: 58 AKPEICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNER 97
           KP++C+   +    +      GAK+ Y      L   ++
Sbjct: 56 EKPDVCVKGAETFHALGERAKEGAKVAYELLDKQLASGDK 95


>gi|146339709|ref|YP_001204757.1| hypothetical protein BRADO2707 [Bradyrhizobium sp. ORS278]
 gi|146192515|emb|CAL76520.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
          Length = 153

 Score = 37.4 bits (85), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 20/101 (19%), Positives = 43/101 (42%), Gaps = 4/101 (3%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           MF++ +  FW+ ++L++L          E++K  +    + + A +  +   S  C  +P
Sbjct: 1   MFFLLRMAFWLGLVLVLLPREKT----PESDKLPQINAQEAVQAATAAISDMSQFCKRQP 56

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVA 101
           + C +  +    V      GA+ +Y       E  E+ + A
Sbjct: 57  QACEVGGQAATVVGHRAQEGARKIYQIITDKPETAEKPTAA 97


>gi|290791270|gb|EFD94929.1| hypothetical protein GL50803_15529 [Giardia lamblia ATCC 50803]
          Length = 326

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 15/98 (15%)

Query: 28  EETEKGKKTEITDFMTATSGTVGYASNLCNAKP-------EICLLWKKIMRNVKR----- 75
           E+ E+    +++D     S  +G  S+LC+A P       E+ L WKK + N +R     
Sbjct: 145 EKAEEDSDLQLSDLKAGESSRIGLHSSLCSANPLQSKVMRELSLSWKKKVENEERIARAL 204

Query: 76  --HTLNGAKIVYGFAK-SALEKNERESVAIHSKNEYPP 110
                     +YG ++ +A +  +R+ + + S+   PP
Sbjct: 205 TIPCTGPYHRLYGMSRITAQDNTQRKILVVESRTSLPP 242


>gi|257459463|ref|ZP_05624572.1| conserved hypothetical protein [Campylobacter gracilis RM3268]
 gi|257442888|gb|EEV18022.1| conserved hypothetical protein [Campylobacter gracilis RM3268]
          Length = 217

 Score = 35.0 bits (79), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 18/84 (21%)

Query: 5  AKKFFWISVLLI------VLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNA 58
          A  +F+I++L +      +LSN YA P+LEE+E    T ++   T   G     +     
Sbjct: 21 ANNYFYIALLFVGLVAYFILSN-YADPYLEESE----TNLSTATTKLEGAQREYNEFFGG 75

Query: 59 KPEICLLWKKIMRNVKRHTLNGAK 82
           PE  +       N KR+ LNGAK
Sbjct: 76 DPEAFV-------NNKRNILNGAK 92


>gi|260462411|ref|ZP_05810619.1| conserved hypothetical protein [Mesorhizobium opportunistum
          WSM2075]
 gi|259031905|gb|EEW33173.1| conserved hypothetical protein [Mesorhizobium opportunistum
          WSM2075]
          Length = 116

 Score = 34.7 bits (78), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 1  MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEI--TDFMTATSGTVGYASNLCNA 58
          MF++ +  FW S++L+ L      P    +++  +  +     + A    VG  + +C  
Sbjct: 1  MFFLIRMAFWFSLVLLAL------PLTAGSDEPGQESVGPVQALFAARDAVGDIAGICER 54

Query: 59 KPEICLLWKKIMRNVKRHTLNGAKI 83
          KP++C   K  M  +       AKI
Sbjct: 55 KPDVCETGKSAMHTITARAKETAKI 79


>gi|92118137|ref|YP_577866.1| hypothetical protein Nham_2624 [Nitrobacter hamburgensis X14]
 gi|91801031|gb|ABE63406.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 135

 Score = 33.9 bits (76), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 19/85 (22%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 1  MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
          MF++ +  FW+ ++L++L    A     + +KG + + ++ ++A +  V   S  C  +P
Sbjct: 1  MFFLLRMAFWLGLVLVLLPRDEA----PKADKGPQIDASEAVSAATAAVSDMSQFCTRQP 56

Query: 61 EICLLWKKIMRNVKRHTLNGAKIVY 85
            C +  +    + +   +GAK +Y
Sbjct: 57 AACEVGGQAAAAIGQRAQDGAKKLY 81


>gi|322794727|gb|EFZ17677.1| hypothetical protein SINV_02630 [Solenopsis invicta]
          Length = 472

 Score = 33.5 bits (75), Expect = 9.1,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 24/43 (55%)

Query: 6   KKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGT 48
           K  FWI  ++I++S +Y+   + ET+     EI D MT  S T
Sbjct: 417 KYVFWIYAVIIMISLIYSLTMVPETKGKTLQEIQDMMTTRSAT 459


Searching..................................................done


Results from round 2




>gi|254781014|ref|YP_003065427.1| hypothetical protein CLIBASIA_04580 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040691|gb|ACT57487.1| hypothetical protein CLIBASIA_04580 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 116

 Score =  171 bits (432), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 116/116 (100%), Positives = 116/116 (100%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP
Sbjct: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPPLPSHH 116
           EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPPLPSHH
Sbjct: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPPLPSHH 116


>gi|209548486|ref|YP_002280403.1| hypothetical protein Rleg2_0883 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534242|gb|ACI54177.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 164

 Score =  148 bits (372), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 58/112 (51%), Gaps = 2/112 (1%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           M+++ K  FW  ++L++LS V++    ++   G + +++D  TA SG   Y + +C+ KP
Sbjct: 1   MWFLIKGSFWFGLVLVLLS-VFSTESSDKFASGPQLQLSDAFTAASGAYDYLTGMCSEKP 59

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPPL 112
           E+C    + +  +      GA + Y    S   K+E  + A H++ + P  L
Sbjct: 60  EVCAKGAETLTALGYRAREGAHVAYELLDSQF-KDETPATAKHAEPQMPVAL 110


>gi|116251149|ref|YP_766987.1| hypothetical protein RL1381 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115255797|emb|CAK06878.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 164

 Score =  147 bits (371), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 58/112 (51%), Gaps = 2/112 (1%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           M+++ K  FW  ++L++LS V++    ++   G + +++D  TA SG   Y + +C+ KP
Sbjct: 1   MWFLIKGSFWFGLVLVLLS-VFSTESSDKLANGPQLQLSDAFTAASGAYDYLTGMCSEKP 59

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPPL 112
           E+C    + +  +      GA++ Y    S   K+E  + A  ++ + P  L
Sbjct: 60  EVCAKGTETLTALGYRAREGARVAYELLDSQF-KDEAPAAAKLAEPQMPVAL 110


>gi|241203747|ref|YP_002974843.1| hypothetical protein Rleg_1009 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240857637|gb|ACS55304.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 164

 Score =  146 bits (369), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 2/112 (1%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           M+++ K  FW  ++L++LS V++    ++   G + +++D  TA SG   Y + +C+ KP
Sbjct: 1   MWFLIKGSFWFGLVLVLLS-VFSTESSDKLASGPQLQLSDAFTAASGAYDYLTGMCSEKP 59

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPPL 112
           E+C    + +  +      GA++ Y    S   K+E  + A  +  + P  L
Sbjct: 60  EVCAKGTETLTALGYRAREGARVAYELLDSQF-KDETPATAKLADPQVPVAL 110


>gi|315122515|ref|YP_004063004.1| hypothetical protein CKC_03835 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495917|gb|ADR52516.1| hypothetical protein CKC_03835 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 108

 Score =  143 bits (360), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 59/108 (54%), Positives = 77/108 (71%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           MF+I KK FWIS+  IV+SN+Y +  LE T++  +TEI D ++ TSGT+ YASN+CN KP
Sbjct: 1   MFFIFKKVFWISLFFIVISNLYPENSLENTKQNAETEIKDIISLTSGTISYASNICNEKP 60

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEY 108
           E+C LW+K   N K+HTL GAKI Y FAKS L+KNE +S    SK + 
Sbjct: 61  ELCSLWEKNFYNFKKHTLKGAKITYKFAKSILKKNEEKSSEFISKQQK 108


>gi|218663388|ref|ZP_03519318.1| hypothetical protein RetlI_30803 [Rhizobium etli IE4771]
          Length = 219

 Score =  139 bits (350), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 2/115 (1%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           M+++ K  FW  ++L++LS V++    ++   G + +++D  TA SG   Y + +C+ KP
Sbjct: 56  MWFLIKGSFWFGLVLVLLS-VFSTEGSDKLASGPQLQLSDAFTAASGAYDYLTGMCSEKP 114

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSAL-EKNERESVAIHSKNEYPPPLPS 114
           E+C    + +  +      GA + Y    S   ++    +    +     P LPS
Sbjct: 115 EVCAKGAETLTALGYRAREGAHVAYELLDSQFADEPATTARLAETAKRSAPALPS 169


>gi|642659|gb|AAA74241.1| unknown [Sinorhizobium meliloti]
          Length = 180

 Score =  136 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 1/99 (1%)

Query: 1  MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
          M+++ K  FW S++L++L  +      E+ E G K EI    +A +  + Y S +C  KP
Sbjct: 1  MWFLVKATFWFSLVLVLLPFLDPS-SSEKLEHGPKMEIGGTFSAANEAIQYISAICVEKP 59

Query: 61 EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERES 99
          ++C    +    +      GA+I Y F  +   + +  +
Sbjct: 60 DVCEKGAETFVALGHRAREGARIAYEFLNTQFAEGDAAA 98


>gi|218671799|ref|ZP_03521468.1| hypothetical protein RetlG_09167 [Rhizobium etli GR56]
          Length = 164

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 2/105 (1%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           M+++ K  FW  ++L++LS V++    ++   G + +++D  TA SG   Y + +C+ KP
Sbjct: 1   MWFLIKGSFWFGLVLVLLS-VFSTEGSDKLASGPQLQLSDAFTAASGAYDYLTGMCSEKP 59

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSK 105
           E+C    + +  +      GA + Y    S    +E  + A  ++
Sbjct: 60  EVCAKGAETLTALGYRAREGAHVAYELLDSQF-SDEPTTTAKLAE 103


>gi|150395840|ref|YP_001326307.1| hypothetical protein Smed_0616 [Sinorhizobium medicae WSM419]
 gi|150027355|gb|ABR59472.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
          Length = 139

 Score =  134 bits (337), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 1/115 (0%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           M+++ K  FW S++L++L  +      E+ E G K EI+   +A +    Y S +C  KP
Sbjct: 1   MWFLVKATFWFSLVLVLLPFLDPS-SSEKLEHGPKMEISGTFSAANEAFQYISAICVEKP 59

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPPLPSH 115
           ++C    +    +      GA+I Y F  S   + +  +  +        P   H
Sbjct: 60  DVCEKGTETFVALGHRAREGARIAYEFLNSQFAEGDAGAPDVKVMTGTVTPAEDH 114


>gi|190890964|ref|YP_001977506.1| hypothetical protein RHECIAT_CH0001347 [Rhizobium etli CIAT 652]
 gi|190696243|gb|ACE90328.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 164

 Score =  134 bits (336), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 2/105 (1%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           M+++ K  FW  ++L++LS V++    ++   G + +++D  TA SG   Y + +C+ KP
Sbjct: 1   MWFLIKGSFWFGLVLVLLS-VFSTEGSDKLASGPQLQLSDAFTAASGAYDYLTGMCSEKP 59

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSK 105
           E+C    + +  +      GA + Y    S    +E  + A  ++
Sbjct: 60  EVCAKGAETLTALGYRAREGAHVAYELLDSQF-SDEPATSAKLAE 103


>gi|86356891|ref|YP_468783.1| hypothetical protein RHE_CH01251 [Rhizobium etli CFN 42]
 gi|86280993|gb|ABC90056.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 162

 Score =  133 bits (335), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 2/106 (1%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           M+++ K  FW  ++L++LS V++    ++   G + +++D  TA SG   Y + +C+ KP
Sbjct: 1   MWFLIKGSFWFGLVLVLLS-VFSTENPDQLAGGPQLQLSDAFTAASGAYDYLTGMCSEKP 59

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKN 106
           E+C    + +  +      GA + Y    S    +E  + A  ++ 
Sbjct: 60  EVCAKGAETLTALGYRAREGAHVAYELLDSQF-TDEPTTTASPAEP 104


>gi|15964754|ref|NP_385107.1| hypothetical protein SMc00456 [Sinorhizobium meliloti 1021]
 gi|307304330|ref|ZP_07584082.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
 gi|307319435|ref|ZP_07598862.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
 gi|7388539|sp|Q52968|Y1001_RHIME RecName: Full=Uncharacterized protein R01001
 gi|15073932|emb|CAC45573.1| Hypothetical protein SMc00456 [Sinorhizobium meliloti 1021]
 gi|306894807|gb|EFN25566.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
 gi|306902798|gb|EFN33391.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
          Length = 145

 Score =  129 bits (325), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 1/99 (1%)

Query: 1  MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
          M+++ K  FW S++L++L  +      E+ E G K EI    +A +  + Y S +C  KP
Sbjct: 1  MWFLVKATFWFSLVLVLLPFLDPS-SSEKLEHGPKMEIGGTFSAANEAIQYISAICVEKP 59

Query: 61 EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERES 99
          ++C    +    +      GA+I Y F  +   + +  +
Sbjct: 60 DVCEKGAETFVALGHRAREGARIAYEFLNTQFAEGDAAA 98


>gi|222147977|ref|YP_002548934.1| hypothetical protein Avi_1303 [Agrobacterium vitis S4]
 gi|221734965|gb|ACM35928.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 154

 Score =  129 bits (325), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 3/109 (2%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           M+++ K  FW +++L+ LS +   P  + +    + E+ + ++A SG   Y S LC  KP
Sbjct: 1   MWFLIKGAFWFTLVLVALSYLGGAP-RDGSASAPQFELANAVSAASGAYDYVSGLCGEKP 59

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYP 109
           ++C+   + ++ +      GA + Y            E     S    P
Sbjct: 60  DVCIKGGQTLQAIGIRAREGALVAYQLLNRQF--GTGEDHQAISVEAAP 106


>gi|209885751|ref|YP_002289608.1| hypothetical protein OCAR_6631 [Oligotropha carboxidovorans OM5]
 gi|209873947|gb|ACI93743.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
          Length = 178

 Score =  128 bits (321), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 5/116 (4%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           MF++ +  FW+ ++L++L    A     ++EKG +   ++ + A +  V   S  C  +P
Sbjct: 1   MFFLLRMAFWLGLVLVLLPRDPA----PDSEKGPQVSASEAVLAATAAVSDMSQFCTRQP 56

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKN-EYPPPLPSH 115
             C +  +    V      GAK VY F     +K E    A  +   E P   P +
Sbjct: 57  AACAVGGQAASVVGERAQAGAKKVYDFLTEKTDKPEANDKATKADEIEKPQAAPDN 112


>gi|227821336|ref|YP_002825306.1| hypothetical protein NGR_c07600 [Sinorhizobium fredii NGR234]
 gi|227340335|gb|ACP24553.1| hypothetical protein NGR_c07600 [Sinorhizobium fredii NGR234]
          Length = 143

 Score =  127 bits (319), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 1/114 (0%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           M+++ K  FW S++L++L  +       + E G K EI D  +A +    Y S +C  KP
Sbjct: 1   MWFLVKATFWFSLVLVLLPFLDPSSNA-KLENGPKVEIGDTFSAANEAFQYVSAICIQKP 59

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPPLPS 114
           ++C    +    +      GA+I Y F  S   +       + +    P  + S
Sbjct: 60  DVCEKGAETFVALGHRAREGARIAYEFLDSQFAETGTPDAKVMTGTVGPAEVSS 113


>gi|222085299|ref|YP_002543829.1| hypothetical protein Arad_1477 [Agrobacterium radiobacter K84]
 gi|221722747|gb|ACM25903.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 153

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 56/107 (52%), Gaps = 3/107 (2%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKG-KKTEITDFMTATSGTVGYASNLCNAK 59
           M+++ +  FW S++L+ L  ++A+P  +    G  + +++D ++A SG + Y  ++C+ K
Sbjct: 1   MWFLIRTGFWFSLVLMFLP-IFAKPQGDPRPAGEPQVQVSDALSAASGVMQYVGSMCSEK 59

Query: 60  PEICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKN 106
           P++CL   + +  +     +GA++ Y        K+++      +  
Sbjct: 60  PDVCLKGGETLTALGYQARDGARVAYDLLGQHF-KDQKPGEQAVATP 105


>gi|299133493|ref|ZP_07026687.1| conserved hypothetical protein [Afipia sp. 1NLS2]
 gi|298591329|gb|EFI51530.1| conserved hypothetical protein [Afipia sp. 1NLS2]
          Length = 166

 Score =  124 bits (311), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 6/114 (5%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           MF++ +  FW+ ++L++L    A     +T KG +   ++ + A +  V   S  C  +P
Sbjct: 1   MFFLLRMAFWLGLVLVLLPRDKA----PDTNKGPQVSASEAVLAATAAVSDMSQFCTRQP 56

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPPLPS 114
             C +  +    V      GAK VY       EKN++         E P   P 
Sbjct: 57  AACAVGGQAATVVGERAQAGAKKVYEMLTERSEKNDKP--EQVEATEKPQAAPD 108


>gi|163759053|ref|ZP_02166139.1| hypothetical protein HPDFL43_04795 [Hoeflea phototrophica DFL-43]
 gi|162283457|gb|EDQ33742.1| hypothetical protein HPDFL43_04795 [Hoeflea phototrophica DFL-43]
          Length = 124

 Score =  116 bits (290), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 1/98 (1%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           M+++ K  FW S++LI L  V+     E  E     E+   M A          +C  KP
Sbjct: 10  MWFLIKGSFWFSLVLIALP-VFDSGSRETLENAPPLEVGQSMAAAMDAFEDIKQICLRKP 68

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERE 98
           ++C    +    +      GA+I Y F  S     E E
Sbjct: 69  DVCETGSETFAALGIRAKEGARIAYEFLDSKFADGESE 106


>gi|325292297|ref|YP_004278161.1| hypothetical protein AGROH133_04769 [Agrobacterium sp. H13-3]
 gi|325060150|gb|ADY63841.1| hypothetical protein AGROH133_04769 [Agrobacterium sp. H13-3]
          Length = 160

 Score =  116 bits (289), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 51/115 (44%), Gaps = 4/115 (3%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           M+++ K  FW S++L+ LS   +    + T++    +I   ++A      Y S +C  KP
Sbjct: 20  MWFLIKGTFWFSLVLVALSYFGSSN--DPTKEPSAFDIPSAVSAAGEAYRYVSAICIEKP 77

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNE--RESVAIHSKNEYPPPLP 113
           ++C+   +    +      GAK+ Y    + L   +    +  + S++E     P
Sbjct: 78  DVCVKGAETFHALGERAKEGAKVAYELLDAQLASGDKTAPAAELASESEKLAAAP 132


>gi|328544567|ref|YP_004304676.1| hypothetical protein SL003B_2949 [polymorphum gilvum SL003B-26A1]
 gi|326414309|gb|ADZ71372.1| hypothetical protein SL003B_2949 [Polymorphum gilvum SL003B-26A1]
          Length = 149

 Score =  114 bits (285), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 5/112 (4%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           MF++ +  FW++++L+++     +     T + K   I +   A   TV   S  C   P
Sbjct: 1   MFFLLRTAFWLTLVLMLIPFGSDETS---TAEIKVDPI-EAFMAAQATVSDISTFCTRNP 56

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPPL 112
           + C    + +  +     +GAKIVY F  ++LE    E+    +  + P PL
Sbjct: 57  QACETGGQALAAIGSRARDGAKIVYEFLDTSLESGSGETQQ-AAAGDMPLPL 107


>gi|15888258|ref|NP_353939.1| hypothetical protein Atu0920 [Agrobacterium tumefaciens str. C58]
 gi|15155916|gb|AAK86724.1| conserved hypothetical protein [Agrobacterium tumefaciens str.
          C58]
          Length = 141

 Score =  112 bits (281), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 44/98 (44%), Gaps = 2/98 (2%)

Query: 1  MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
          M+++ K  FW S++L+ LS + +    +  ++    ++   ++A      Y S +C  KP
Sbjct: 1  MWFLIKGTFWFSLVLVALSYIGSSN--DPAKEPSAFDLPSAVSAAGEAYRYVSAICIEKP 58

Query: 61 EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERE 98
          ++C+   +    +      GAK+ Y      L   ++ 
Sbjct: 59 DVCVKGAETFHALGERAKEGAKVAYELLDKQLASGDKP 96


>gi|118593470|ref|ZP_01550850.1| hypothetical protein SIAM614_16962 [Stappia aggregata IAM 12614]
 gi|118433949|gb|EAV40607.1| hypothetical protein SIAM614_16962 [Stappia aggregata IAM 12614]
          Length = 183

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 45/114 (39%), Gaps = 6/114 (5%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           MF++ +  FW++++L+++         E+T       ++    A   T+      C   P
Sbjct: 28  MFFLLRTAFWLTLVLVLIPL---GSDREDTSAENIDPVS-AFLAAQATMSDIGGFCGRNP 83

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPPLPS 114
           + C      +  +     +GA+IVY F  + +   ++    +      P P  S
Sbjct: 84  QACETGGDALTAIGSRARDGARIVYEFLDTQIT--DKPGSELLVTGSTPVPSAS 135


>gi|148254485|ref|YP_001239070.1| hypothetical protein BBta_3044 [Bradyrhizobium sp. BTAi1]
 gi|146406658|gb|ABQ35164.1| hypothetical protein BBta_3044 [Bradyrhizobium sp. BTAi1]
          Length = 153

 Score =  104 bits (260), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 43/111 (38%), Gaps = 4/111 (3%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           MF++ +  FW+ ++L++L          + +K  +    + + A +  V   S  C  +P
Sbjct: 1   MFFLLRMAFWLGLVLVLLPR----EKSPDADKLPQINAHEAVQAATAAVSDMSQFCKRQP 56

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPP 111
           + C +  +    +      GA+ +Y       E  E+ + A        P 
Sbjct: 57  QACEVGGQAATVIGHRAQEGARKIYQIITDKPETAEKPATADKLIGPVKPA 107


>gi|146339709|ref|YP_001204757.1| hypothetical protein BRADO2707 [Bradyrhizobium sp. ORS278]
 gi|146192515|emb|CAL76520.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
          Length = 153

 Score =  104 bits (258), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 44/111 (39%), Gaps = 4/111 (3%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           MF++ +  FW+ ++L++L          E++K  +    + + A +  +   S  C  +P
Sbjct: 1   MFFLLRMAFWLGLVLVLLPR----EKTPESDKLPQINAQEAVQAATAAISDMSQFCKRQP 56

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPP 111
           + C +  +    V      GA+ +Y       E  E+ + A        P 
Sbjct: 57  QACEVGGQAATVVGHRAQEGARKIYQIITDKPETAEKPTAADKFIGPVKPA 107


>gi|254504950|ref|ZP_05117101.1| hypothetical protein SADFL11_4989 [Labrenzia alexandrii DFL-11]
 gi|222441021|gb|EEE47700.1| hypothetical protein SADFL11_4989 [Labrenzia alexandrii DFL-11]
          Length = 147

 Score =  103 bits (257), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 8/112 (7%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEIT--DFMTATSGTVGYASNLCNA 58
           MF++ +  FW++++L+++      P   ETE      I       A   T+      C+ 
Sbjct: 1   MFFLLRTAFWLTLVLVLI------PIGSETESTPVEPINPVSAFIAAQATMSDIGGFCDR 54

Query: 59  KPEICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPP 110
            P+ C      +  +     +GA+IVY +  + +   +     I       P
Sbjct: 55  NPQACETGGSALTAIGSRARDGARIVYEYLDTQIADTDPSETVITGSTNVQP 106


>gi|92118137|ref|YP_577866.1| hypothetical protein Nham_2624 [Nitrobacter hamburgensis X14]
 gi|91801031|gb|ABE63406.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 135

 Score = 94.1 bits (232), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 50/116 (43%), Gaps = 4/116 (3%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           MF++ +  FW+ ++L++L    A     + +KG + + ++ ++A +  V   S  C  +P
Sbjct: 1   MFFLLRMAFWLGLVLVLLPRDEA----PKADKGPQIDASEAVSAATAAVSDMSQFCTRQP 56

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPPLPSHH 116
             C +  +    + +   +GAK +Y         +   S+   +  E      + H
Sbjct: 57  AACEVGGQAAAAIGQRAQDGAKKLYRIITDKRAPDHTGSIDAMASAEAATSEDTQH 112


>gi|27378181|ref|NP_769710.1| hypothetical protein bll3070 [Bradyrhizobium japonicum USDA 110]
 gi|27351328|dbj|BAC48335.1| bll3070 [Bradyrhizobium japonicum USDA 110]
          Length = 144

 Score = 91.4 bits (225), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 49/115 (42%), Gaps = 9/115 (7%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           M ++ +  FW+ ++L++L          E+EK  +    D + A +  V   +  C  +P
Sbjct: 1   MRFLLRITFWLGLVLVLLPRDKT----PESEKLPQIGAADAVQAATAAVSDMTQFCKRQP 56

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPPLPSH 115
             C +  +    + +   +GAK +Y       +K E+ +   + K++     P H
Sbjct: 57  AACEVGGQAASIIGQRAQDGAKKIYQIIN---DKKEQITNEKNEKSDK--KAPDH 106


>gi|307946174|ref|ZP_07661509.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
 gi|307769838|gb|EFO29064.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
          Length = 161

 Score = 88.7 bits (218), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 40/113 (35%), Gaps = 7/113 (6%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           MF++ +  FWI+++L+++          +    +  +      A    V      C   P
Sbjct: 1   MFFLLRTTFWITLVLVLIP----LGSDRDDSHFESVDPVAAYFAAHAAVADMGGFCTRNP 56

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNER---ESVAIHSKNEYPP 110
             C    + +  +     +GA+IVY F    + +       SV      + P 
Sbjct: 57  GACKTGGEALTAIGAQARDGARIVYEFLDDQVTEPHEANVPSVVAIESVDAPL 109


>gi|85715578|ref|ZP_01046558.1| hypothetical protein NB311A_18056 [Nitrobacter sp. Nb-311A]
 gi|85697517|gb|EAQ35394.1| hypothetical protein NB311A_18056 [Nitrobacter sp. Nb-311A]
          Length = 180

 Score = 88.7 bits (218), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 46/116 (39%), Gaps = 4/116 (3%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           MF++ +  FW+ ++L++L    A     E  K  +   ++ ++A +  V   S  C  +P
Sbjct: 43  MFFLLRMAFWLGLVLVLLPRDEA----PEANKEPRIGASEAVSAATAAVSDMSQFCKRQP 98

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPPLPSHH 116
             C +  +    + +   +GA+ +Y         +   S+      E      + H
Sbjct: 99  AACEVGGQAASAIGQRAQDGARKLYRIITEKRPPDHTGSIDAVPSVEAAASGDTQH 154


>gi|90423286|ref|YP_531656.1| hypothetical protein RPC_1778 [Rhodopseudomonas palustris BisB18]
 gi|90105300|gb|ABD87337.1| conserved hypothetical protein [Rhodopseudomonas palustris
          BisB18]
          Length = 136

 Score = 88.3 bits (217), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 43/97 (44%), Gaps = 4/97 (4%)

Query: 1  MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
          MF++ +  FW+ ++L++L          E++K  +   ++ +TA S  V   S  C  +P
Sbjct: 1  MFFLLRMAFWLGLVLVLLPR----EKTPESDKLPQLGASEAVTAASAAVSDMSQFCKRQP 56

Query: 61 EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNER 97
            C +  +    + +    GA+ +Y         +++
Sbjct: 57 AACEIGGQAATVIGQRATEGARKIYQIIIEKRGNDDK 93


>gi|316934985|ref|YP_004109967.1| hypothetical protein Rpdx1_3667 [Rhodopseudomonas palustris DX-1]
 gi|315602699|gb|ADU45234.1| hypothetical protein Rpdx1_3667 [Rhodopseudomonas palustris DX-1]
          Length = 140

 Score = 87.2 bits (214), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           MF++ +  FWI V+L+ L          ++EK  +   ++ ++A S  V   S  C  +P
Sbjct: 1   MFFLLRLAFWIGVVLVFLPR----ESTPDSEKLPQIGASEAVSAASAAVSDFSQFCKRQP 56

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPP 111
             C + ++    +      GA+ +Y            E        + P P
Sbjct: 57  AACEVGEQAATVIGHRAQEGARKLYQIITEK----RGEPTGAIGGGDVPDP 103


>gi|75676407|ref|YP_318828.1| hypothetical protein Nwi_2222 [Nitrobacter winogradskyi Nb-255]
 gi|74421277|gb|ABA05476.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
          Length = 138

 Score = 86.4 bits (212), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 46/116 (39%), Gaps = 4/116 (3%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           MF++ +  FW+ ++L++L    A     E  K  +   ++ ++A +  V   +  C  +P
Sbjct: 1   MFFLLRMAFWLGLVLVLLPRDEA----PEANKAPRIGASEAVSAATAAVSDMTQFCTRQP 56

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPPLPSHH 116
             C +  +    + +   +GAK +Y         +   S+      E      + H
Sbjct: 57  AACEVGGQAAAVIGQRAQDGAKKLYRIITDKRPPDHTGSIDTVPAVETAASGDAQH 112


>gi|86750626|ref|YP_487122.1| hypothetical protein RPB_3516 [Rhodopseudomonas palustris HaA2]
 gi|86573654|gb|ABD08211.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 132

 Score = 86.0 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 4/100 (4%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           MF++ +  FW+ ++L++L          E+EK  +   +D ++A S  V   S  C  +P
Sbjct: 1   MFFLLRLTFWLGLVLVLLPR----EQTPESEKLPQVGASDAVSAASAAVSDFSQFCKRQP 56

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESV 100
             C + +     +      GA+ VY         +E  S+
Sbjct: 57  AACEVGEHAASVIGHRAQEGARKVYRLIIEKRSSDETGSI 96


>gi|91976420|ref|YP_569079.1| hypothetical protein RPD_1943 [Rhodopseudomonas palustris BisB5]
 gi|91682876|gb|ABE39178.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 134

 Score = 86.0 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 43/100 (43%), Gaps = 4/100 (4%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           MF++ +  FW+ ++L++L          ++EK  +   ++ ++A S  V   S  C  +P
Sbjct: 1   MFFLLRLTFWLGLVLVLLPR----EKTPDSEKLPQIGASEAVSAASAAVSDFSQFCKRQP 56

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESV 100
             C + +     +      GA+ +Y         ++  S+
Sbjct: 57  SACEIGEHAATVIGHRAQEGARKIYKIIIDKRSSDQTGSI 96


>gi|39934926|ref|NP_947202.1| hypothetical protein RPA1857 [Rhodopseudomonas palustris CGA009]
 gi|192290455|ref|YP_001991060.1| hypothetical protein Rpal_2062 [Rhodopseudomonas palustris TIE-1]
 gi|39648776|emb|CAE27298.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
 gi|192284204|gb|ACF00585.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
          Length = 140

 Score = 85.6 bits (210), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           MF++ +  FWI V+L+ L          ++EK  +   ++ ++A S  V   S  C  +P
Sbjct: 1   MFFLLRLAFWIGVVLVFLPR----ESTPDSEKLPQIGASEAVSAASAAVSDFSQFCKRQP 56

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPP 111
             C + ++    +      GA+ +Y            E        + P P
Sbjct: 57  AACEVGEQAATVIGHRAQEGARKLYQIITEK----RGEPTGAIGAADAPDP 103


>gi|13476353|ref|NP_107923.1| hypothetical protein mll7648 [Mesorhizobium loti MAFF303099]
 gi|14027114|dbj|BAB54068.1| mll7648 [Mesorhizobium loti MAFF303099]
          Length = 116

 Score = 84.5 bits (207), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 38/111 (34%), Gaps = 4/111 (3%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           MF++ +  FW S++L+ L          +   G        + A    VG  + +C  KP
Sbjct: 1   MFFLIRMAFWFSLVLLALPLSVGSDEPGQESVGPI----QALFAARDAVGDIAGICERKP 56

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPP 111
           ++C   K  M  +       AKI            +  ++      E   P
Sbjct: 57  DVCETGKSAMHTITARAKETAKIAAAMLDDKSASPDTSTMTGSVAEEIVLP 107


>gi|115523888|ref|YP_780799.1| hypothetical protein RPE_1871 [Rhodopseudomonas palustris BisA53]
 gi|115517835|gb|ABJ05819.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
          Length = 144

 Score = 84.5 bits (207), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 44/112 (39%), Gaps = 4/112 (3%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           M ++ +  FW+ ++L++L          E++K  +    + ++A +  V      C  +P
Sbjct: 1   MMFLLRMAFWLGLVLVLLPR----EKTPESDKLPQIGTAEAVSAATAAVNDVGQFCKRQP 56

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPPL 112
             C +  +    + +   +GA+ +Y         +   S+      E  P L
Sbjct: 57  AACEVGGQAATVIGQRATDGARKLYQIITDKRSGDHTSSIGEIDTAETAPGL 108


>gi|260462411|ref|ZP_05810619.1| conserved hypothetical protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259031905|gb|EEW33173.1| conserved hypothetical protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 116

 Score = 82.9 bits (203), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 4/111 (3%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           MF++ +  FW S++L+ L          +   G        + A    VG  + +C  KP
Sbjct: 1   MFFLIRMAFWFSLVLLALPLTAGSDEPGQESVGPV----QALFAARDAVGDIAGICERKP 56

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPP 111
           ++C   K  M  +       AKI            +  ++          P
Sbjct: 57  DVCETGKSAMHTITARAKETAKIAAAMLDDKSAGPDTSTMTGSVAENVVLP 107


>gi|319408240|emb|CBI81893.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
          Length = 127

 Score = 82.2 bits (201), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 2/112 (1%)

Query: 3   WIAKKFFWISVLLIVLSNVYAQPFLEETEK-GKKTEITDFMTATSGTVGYASNLCNAKPE 61
           ++ K  F++ ++ +V+S   A+P    +         +D + A   T+      C    E
Sbjct: 4   FLIKSAFFLFIIFVVISFFSAKPKDNHSSSLEANITASDAIIAFKNTITDLGKFCERNVE 63

Query: 62  ICLLWKKIMRNVKRHTLNGAKIVYGFAKSALE-KNERESVAIHSKNEYPPPL 112
           +C   K     +     +GAKI Y +  S    KN  +     S+++  PP 
Sbjct: 64  VCKTGKSFFNPLGERARDGAKIAYEYLDSIFSNKNTIQPENTTSEDDILPPA 115


>gi|218677873|ref|ZP_03525770.1| hypothetical protein RetlC8_03007 [Rhizobium etli CIAT 894]
          Length = 56

 Score = 80.6 bits (197), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 1  MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCN 57
          M+++ K  FW  ++L++LS V++    +    G   +++D  TA SG   Y + +C+
Sbjct: 1  MWFLIKGSFWFGLVLVLLS-VFSTESSDTLAGGPHLQLSDAYTAASGAYDYLTGMCS 56


>gi|218508492|ref|ZP_03506370.1| hypothetical protein RetlB5_13414 [Rhizobium etli Brasil 5]
          Length = 109

 Score = 79.1 bits (193), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 1/55 (1%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNL 55
           M+++ K  FW  ++L++LS V++    ++   G + +++D  TA SG   Y + +
Sbjct: 56  MWFLIKGSFWFGLVLVLLS-VFSTEGSDKLASGPQLQLSDAFTAASGAYDYLTGM 109


>gi|319784579|ref|YP_004144055.1| hypothetical protein Mesci_4899 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170467|gb|ADV14005.1| hypothetical protein Mesci_4899 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 117

 Score = 76.8 bits (187), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 34/107 (31%), Gaps = 4/107 (3%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           M ++ +  FW S++L+ L              G        + A    VG  + +C  KP
Sbjct: 1   MVFLIRMAFWFSLVLLALPLSVGPDEAGHESVGPI----QALFAAREAVGDIAGICERKP 56

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNE 107
           ++C   K  M  +       AKI               S    S  E
Sbjct: 57  DVCETGKSAMHTITARAKETAKIAAAMMDDKSAAGPDTSTMTGSVPE 103


>gi|121602754|ref|YP_988743.1| hypothetical protein BARBAKC583_0425 [Bartonella bacilliformis
           KC583]
 gi|120614931|gb|ABM45532.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
          Length = 120

 Score = 74.8 bits (182), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 37/107 (34%), Gaps = 2/107 (1%)

Query: 3   WIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEI--TDFMTATSGTVGYASNLCNAKP 60
           +  K  F++  + +++S    +P  + +     T I  +D  TA    +      C    
Sbjct: 4   FFIKSVFFLLFVFVIISFFVKKPNNDNSSSQIATNITTSDAATALKEAINDLRKFCERNI 63

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNE 107
           + C   K  + ++     NGAK  Y +       N+          E
Sbjct: 64  QTCETGKSFLGSIGERARNGAKTAYEYLDRTFGDNDTIQSKNIDPKE 110


>gi|298290682|ref|YP_003692621.1| hypothetical protein Snov_0670 [Starkeya novella DSM 506]
 gi|296927193|gb|ADH88002.1| conserved hypothetical protein [Starkeya novella DSM 506]
          Length = 160

 Score = 68.7 bits (166), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 43/102 (42%), Gaps = 2/102 (1%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKG--KKTEITDFMTATSGTVGYASNLCNA 58
           MF++ +  FW++++ ++L  V   P           +    + ++A S  V  A   C  
Sbjct: 1   MFFLLRIGFWLTIVFLLLPAVTGGPSPHGASGNGEPQVSAVEALSAASSAVADAGGFCER 60

Query: 59  KPEICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESV 100
           +P+ C +   ++  +      GA+    +    + + +R++ 
Sbjct: 61  QPQACTIGAGLIAMISERAEAGARFALSYLSEQILEEKRKAA 102


>gi|154245352|ref|YP_001416310.1| hypothetical protein Xaut_1405 [Xanthobacter autotrophicus Py2]
 gi|154159437|gb|ABS66653.1| hypothetical protein Xaut_1405 [Xanthobacter autotrophicus Py2]
          Length = 151

 Score = 63.7 bits (153), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 7/98 (7%)

Query: 1  MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
          MF++ +  FWIS        +   P   +   GK+  + D   A    V      C  +P
Sbjct: 1  MFFLLRLAFWIS------LVLLLLPLGLKGTDGKEVSVFDAFGAAQALVADLKGFCERQP 54

Query: 61 EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERE 98
          + C +  ++  ++      GAK ++    SA    E  
Sbjct: 55 QACAVGGQMASHLVEKAQVGAKWLHDSIGSA-PSGEAP 91


>gi|148560122|ref|YP_001258573.1| hypothetical protein BOV_0576 [Brucella ovis ATCC 25840]
 gi|148371379|gb|ABQ61358.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
          Length = 149

 Score = 61.0 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 44/121 (36%), Gaps = 10/121 (8%)

Query: 3   WIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDF--MTATSGTVGYASNLCNAKP 60
           ++ K  FW+S+  I + + +      +  +  K E +    + A   T      LC   P
Sbjct: 9   FLLKSAFWLSLAFIAVPHFFPADQENKAHEQAKQEPSSIEQILANGKTAVEIGKLCMDNP 68

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSAL-EKNERESVAIHS-------KNEYPPPL 112
             C     ++ +     L G++++  +  +    K E       +       K++ P P 
Sbjct: 69  SFCKSGTSLVSSAGSGFLEGSRVMLEYLSARFGAKKETPVQERPAAAETISVKSQIPVPT 128

Query: 113 P 113
           P
Sbjct: 129 P 129


>gi|158422716|ref|YP_001524008.1| hypothetical protein AZC_1092 [Azorhizobium caulinodans ORS 571]
 gi|158329605|dbj|BAF87090.1| hypothetical protein [Azorhizobium caulinodans ORS 571]
          Length = 140

 Score = 60.2 bits (144), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 6/86 (6%)

Query: 1  MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
          MF++ +  FW++        +   P    ++ G++       TA    +  A   C  +P
Sbjct: 1  MFFLLRMAFWLA------LILLILPIGVTSDGGRQIGAWQAFTAVQAAINDARGFCQRQP 54

Query: 61 EICLLWKKIMRNVKRHTLNGAKIVYG 86
          + C +  +++ ++       AK VY 
Sbjct: 55 DACAVGGEMLDHMAEKAQASAKWVYD 80


>gi|239831436|ref|ZP_04679765.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
 gi|239823703|gb|EEQ95271.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
          Length = 158

 Score = 60.2 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/117 (12%), Positives = 38/117 (32%), Gaps = 9/117 (7%)

Query: 3   WIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEIT-------DFMTATSGTVGYASNL 55
           ++ K  FW+++  +V+  ++        ++      T       D + A   T      L
Sbjct: 15  FLIKSAFWLTLAFLVMPRIFPADKQNTPQEKPAMTGTRREPDSIDQLLANGKTAVELGKL 74

Query: 56  CNAKPEICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYPPPL 112
           C   P  C     ++ +     L G+++   +         +      ++    P +
Sbjct: 75  CIDNPSFCQNGTSLVSSAGSGLLEGSRVALEYLSDRF--GTKPQPPAKAEPAASPAV 129


>gi|319898552|ref|YP_004158645.1| hypothetical protein BARCL_0378 [Bartonella clarridgeiae 73]
 gi|319402516|emb|CBI76059.1| conserved exported protein of unknown function [Bartonella
           clarridgeiae 73]
          Length = 118

 Score = 59.8 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 39/101 (38%), Gaps = 2/101 (1%)

Query: 3   WIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEIT--DFMTATSGTVGYASNLCNAKP 60
           ++ K  F +  + +++S    +         K+T+ T  D + A   T+      C    
Sbjct: 4   FLIKSVFLLFFIFVIVSFFATKQNNNNLSFPKETDATTRDAIIALKETINDLGMFCERNI 63

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVA 101
           E C + K ++ ++     NG+KI+Y +           +  
Sbjct: 64  EACKIGKSLLSSMGERARNGSKIIYEYLNHTFSNKNTSASQ 104


>gi|319403878|emb|CBI77464.1| conserved exported hypothetical protein [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 122

 Score = 59.8 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 1/88 (1%)

Query: 25  PFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKPEICLLWKKIMRNVKRHTLNGAKIV 84
                + +       D + A   T+      C    E C + K  + ++     NG+KI+
Sbjct: 28  NNNPSSSQETDATTRDMIVALKETINDLGMFCERNIEACKIGKSFLESMGERARNGSKII 87

Query: 85  YGFAKSALE-KNERESVAIHSKNEYPPP 111
           Y +    L  KN + S   HS      P
Sbjct: 88  YEYLDHTLSNKNMKPSQEDHSSTGMKNP 115


>gi|306842154|ref|ZP_07474823.1| cytoplasmic protein [Brucella sp. BO2]
 gi|306287741|gb|EFM59172.1| cytoplasmic protein [Brucella sp. BO2]
          Length = 149

 Score = 59.4 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 44/126 (34%), Gaps = 15/126 (11%)

Query: 3   WIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEIT-------DFMTATSGTVGYASNL 55
           ++ K  FW+S+  I + + +      +T +    E         + + A   T      L
Sbjct: 4   FLLKSAFWLSLAFIAVPHFFPADQENKTHEKPAHEQAKQEPSSIEQILANGKTAVEIGKL 63

Query: 56  CNAKPEICLLWKKIMRNVKRHTLNGAKIVYGFAKSAL-EKNERESVAIHS-------KNE 107
           C   P  C     ++ +     L G++++  +  +    K E       +       K++
Sbjct: 64  CMDNPSFCKSGTSLVSSAGSGFLEGSRVMLEYLSARFGAKKETPVQERPAAAETVSVKSQ 123

Query: 108 YPPPLP 113
            P P P
Sbjct: 124 IPVPTP 129


>gi|240850106|ref|YP_002971499.1| hypothetical protein Bgr_04940 [Bartonella grahamii as4aup]
 gi|240267229|gb|ACS50817.1| hypothetical protein Bgr_04940 [Bartonella grahamii as4aup]
          Length = 105

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 42/96 (43%), Gaps = 2/96 (2%)

Query: 3  WIAKKFFWISVLLIVLSNVYAQPFLE--ETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
          ++ K  F++  + +++S   A P  +   + K  +T  +D ++A    +      C+   
Sbjct: 4  FLIKLSFFLFFIFVIISFFVANPSSDHSSSPKNNETTTSDVISAFKEALNDLGAFCDRNI 63

Query: 61 EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNE 96
          E C + K  + ++      GA+  Y +  + L KN 
Sbjct: 64 ETCKVGKSFLSSLGERAYYGARAAYEYLGNILGKNN 99


>gi|237815040|ref|ZP_04594038.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|237789877|gb|EEP64087.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
          Length = 154

 Score = 58.3 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 43/126 (34%), Gaps = 15/126 (11%)

Query: 3   WIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEIT-------DFMTATSGTVGYASNL 55
           ++ K  FW+S+  I + + +      +  +    E         + + A   T      L
Sbjct: 9   FLLKSAFWLSLAFIAVPHFFPADQENKAHEKPAHEQAKQEPSSIEQILANGKTAVEIGKL 68

Query: 56  CNAKPEICLLWKKIMRNVKRHTLNGAKIVYGFAKSAL-EKNERESVAIHS-------KNE 107
           C   P  C     ++ +     L G++++  +  +    K E       +       K++
Sbjct: 69  CMDNPSFCKSGTSLVSSAGSGFLEGSRVMLEYLSARFGAKKETPVQERPAAAETISVKSQ 128

Query: 108 YPPPLP 113
            P P P
Sbjct: 129 IPVPTP 134


>gi|62289543|ref|YP_221336.1| hypothetical protein BruAb1_0597 [Brucella abortus bv. 1 str.
           9-941]
 gi|82699472|ref|YP_414046.1| hypothetical protein BAB1_0600 [Brucella melitensis biovar Abortus
           2308]
 gi|189023800|ref|YP_001934568.1| hypothetical protein BAbS19_I05610 [Brucella abortus S19]
 gi|225852105|ref|YP_002732338.1| hypothetical protein BMEA_A0615 [Brucella melitensis ATCC 23457]
 gi|254688861|ref|ZP_05152115.1| hypothetical protein Babob68_01486 [Brucella abortus bv. 6 str.
           870]
 gi|254693342|ref|ZP_05155170.1| hypothetical protein Babob3T_01509 [Brucella abortus bv. 3 str.
           Tulya]
 gi|254696991|ref|ZP_05158819.1| hypothetical protein Babob28_04555 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|256113118|ref|ZP_05453995.1| hypothetical protein Bmelb3E_10427 [Brucella melitensis bv. 3 str.
           Ether]
 gi|256257109|ref|ZP_05462645.1| hypothetical protein Babob9C_07073 [Brucella abortus bv. 9 str.
           C68]
 gi|256264385|ref|ZP_05466917.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|260545700|ref|ZP_05821441.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260754345|ref|ZP_05866693.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260761389|ref|ZP_05873732.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260883370|ref|ZP_05894984.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|261213591|ref|ZP_05927872.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|265994528|ref|ZP_06107085.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|297247956|ref|ZP_06931674.1| hypothetical protein BAYG_00889 [Brucella abortus bv. 5 str. B3196]
 gi|62195675|gb|AAX73975.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
 gi|82615573|emb|CAJ10556.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
           2308]
 gi|189019372|gb|ACD72094.1| hypothetical protein BAbS19_I05610 [Brucella abortus S19]
 gi|225640470|gb|ACO00384.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
 gi|260097107|gb|EEW80982.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260671821|gb|EEX58642.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260674453|gb|EEX61274.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260872898|gb|EEX79967.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|260915198|gb|EEX82059.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|262765641|gb|EEZ11430.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263094679|gb|EEZ18458.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|297175125|gb|EFH34472.1| hypothetical protein BAYG_00889 [Brucella abortus bv. 5 str. B3196]
          Length = 149

 Score = 57.5 bits (137), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 43/126 (34%), Gaps = 15/126 (11%)

Query: 3   WIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEIT-------DFMTATSGTVGYASNL 55
           ++ K  FW+S+  I + + +      +  +    E         + + A   T      L
Sbjct: 4   FLLKSAFWLSLAFIAVPHFFPADQENKAHEKPAHEQAKQEPSSIEQILANGKTAVEIGKL 63

Query: 56  CNAKPEICLLWKKIMRNVKRHTLNGAKIVYGFAKSAL-EKNERESVAIHS-------KNE 107
           C   P  C     ++ +     L G++++  +  +    K E       +       K++
Sbjct: 64  CMDNPSFCKSGTSLVSSAGSGFLEGSRVMLEYLSARFGAKKETPVQERPAAAETISVKSQ 123

Query: 108 YPPPLP 113
            P P P
Sbjct: 124 IPVPTP 129


>gi|23501464|ref|NP_697591.1| hypothetical protein BR0575 [Brucella suis 1330]
 gi|161618551|ref|YP_001592438.1| hypothetical protein BCAN_A0590 [Brucella canis ATCC 23365]
 gi|254703916|ref|ZP_05165744.1| hypothetical protein Bsuib36_08314 [Brucella suis bv. 3 str. 686]
 gi|256060708|ref|ZP_05450872.1| hypothetical protein Bneo5_10155 [Brucella neotomae 5K33]
 gi|260566835|ref|ZP_05837305.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|261324699|ref|ZP_05963896.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261754567|ref|ZP_05998276.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|23347368|gb|AAN29506.1| conserved hypothetical protein [Brucella suis 1330]
 gi|161335362|gb|ABX61667.1| Hypothetical protein BCAN_A0590 [Brucella canis ATCC 23365]
 gi|260156353|gb|EEW91433.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|261300679|gb|EEY04176.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261744320|gb|EEY32246.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
          Length = 149

 Score = 57.1 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 43/126 (34%), Gaps = 15/126 (11%)

Query: 3   WIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEIT-------DFMTATSGTVGYASNL 55
           ++ K  FW+S+  I + + +      +  +    E         + + A   T      L
Sbjct: 4   FLLKSAFWLSLAFIAVPHFFPADQENKPHEKPAHEQAKQEPSSIEQILANGKTAVEIGKL 63

Query: 56  CNAKPEICLLWKKIMRNVKRHTLNGAKIVYGFAKSAL-EKNERESVAIHS-------KNE 107
           C   P  C     ++ +     L G++++  +  +    K E       +       K++
Sbjct: 64  CMDNPSFCKSGTSLVSSAGSGFLEGSRVMLEYLSARFGAKKETPVQERPAAAETISVKSQ 123

Query: 108 YPPPLP 113
            P P P
Sbjct: 124 IPVPTP 129


>gi|254729893|ref|ZP_05188471.1| hypothetical protein Babob42_01499 [Brucella abortus bv. 4 str.
           292]
 gi|260757564|ref|ZP_05869912.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260667882|gb|EEX54822.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
          Length = 149

 Score = 56.7 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 43/126 (34%), Gaps = 15/126 (11%)

Query: 3   WIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEIT-------DFMTATSGTVGYASNL 55
           ++ K  FW+S+  I + + +      +  +    E         + + A   T      L
Sbjct: 4   FLLKSAFWLSLAFIAVPHFFPADQENKAHEKPAHEQAKQEPSSIEQILANGKTAVEIGKL 63

Query: 56  CNAKPEICLLWKKIMRNVKRHTLNGAKIVYGFAKSAL-EKNERESVAIHS-------KNE 107
           C   P  C     ++ +     L G++++  +  +    K E       +       K++
Sbjct: 64  CMDNPSFCKSGISLVSSAGSGFLEGSRVMLEYLSARFGAKKETPVQERPAAAETISVKSQ 123

Query: 108 YPPPLP 113
            P P P
Sbjct: 124 IPVPTP 129


>gi|254718727|ref|ZP_05180538.1| hypothetical protein Bru83_04153 [Brucella sp. 83/13]
 gi|265983703|ref|ZP_06096438.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306838704|ref|ZP_07471539.1| cytoplasmic protein [Brucella sp. NF 2653]
 gi|264662295|gb|EEZ32556.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306406191|gb|EFM62435.1| cytoplasmic protein [Brucella sp. NF 2653]
          Length = 154

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 47/131 (35%), Gaps = 20/131 (15%)

Query: 3   WIAKKFFWISVLLIVLSNVYAQPFLEET-----------EKGKKTEIT-DFMTATSGTVG 50
           ++ K  FW+S+  I + + +      +            E+ K+   + + + A   T  
Sbjct: 4   FLLKSAFWLSLAFIAVPHFFPADQENKAQENKTHEKPAHEQAKQEPSSIEQILANGKTAV 63

Query: 51  YASNLCNAKPEICLLWKKIMRNVKRHTLNGAKIVYGFAKSAL-EKNERESVAIHS----- 104
               LC   P  C     ++ +     L G++++  +  +    K E  +    +     
Sbjct: 64  EIGKLCMDNPSFCKSGTSLVSSAGSGFLEGSRVMLEYLSARFGAKKETPAQERPAAAETV 123

Query: 105 --KNEYPPPLP 113
             K++ P P P
Sbjct: 124 SVKSQIPVPTP 134


>gi|225627082|ref|ZP_03785120.1| cytoplasmic protein [Brucella ceti str. Cudo]
 gi|225617917|gb|EEH14961.1| cytoplasmic protein [Brucella ceti str. Cudo]
          Length = 159

 Score = 55.6 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 46/131 (35%), Gaps = 20/131 (15%)

Query: 3   WIAKKFFWISVLLIVLSNVYAQPFLEET-----------EKGKKTEIT-DFMTATSGTVG 50
           ++ K  FW+S+  I + + +      +            E+ K+   + + + A   T  
Sbjct: 9   FLLKSAFWLSLAFIAVPHFFPADQENKAQENKPHEKPAHEQAKQEPSSIEQILANGKTAV 68

Query: 51  YASNLCNAKPEICLLWKKIMRNVKRHTLNGAKIVYGFAKSAL-EKNERESVAIHS----- 104
               LC   P  C     ++ +     L G++++  +  +    K E       +     
Sbjct: 69  EIGKLCMDNPSFCKSGTSLVSSAGSGFLEGSRVMLEYLSARFGAKKETPVQERPAAAETI 128

Query: 105 --KNEYPPPLP 113
             K++ P P P
Sbjct: 129 SVKSQIPVPTP 139


>gi|153010010|ref|YP_001371225.1| hypothetical protein Oant_2684 [Ochrobactrum anthropi ATCC 49188]
 gi|151561898|gb|ABS15396.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
          Length = 147

 Score = 55.6 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 35/106 (33%), Gaps = 8/106 (7%)

Query: 3   WIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEIT-------DFMTATSGTVGYASNL 55
           ++ K  FW+S+  IV+   +      + +K      T       D + A   T      L
Sbjct: 4   FLIKSVFWLSLAFIVMPRFFPADEQNKPQKKPAIAETKREPDSIDQLLANGKTAVELGKL 63

Query: 56  CNAKPEICLLWKKIMRNVKRHTLNGAKIVYGFAKSAL-EKNERESV 100
           C   P  C     ++ +     L G++    +       K +  + 
Sbjct: 64  CIDNPSFCQNGTSLVSSAGSGLLEGSRAALEYLSDRFGTKPQPPAK 109


>gi|306845190|ref|ZP_07477766.1| cytoplasmic protein [Brucella sp. BO1]
 gi|306274349|gb|EFM56156.1| cytoplasmic protein [Brucella sp. BO1]
          Length = 154

 Score = 55.2 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 46/131 (35%), Gaps = 20/131 (15%)

Query: 3   WIAKKFFWISVLLIVLSNVYAQPFLEET-----------EKGKKTEIT-DFMTATSGTVG 50
           ++ K  FW+S+  I + + +      +            E+ K+   + + + A   T  
Sbjct: 4   FLLKSAFWLSLAFIAVPHFFPADQENKAQENKTHEKPAHEQAKQEPSSIEQILANGKTAV 63

Query: 51  YASNLCNAKPEICLLWKKIMRNVKRHTLNGAKIVYGFAKSAL-EKNERESVAIHS----- 104
               LC   P  C     ++ +     L G++++  +  +    K E       +     
Sbjct: 64  EIGKLCMDNPSFCKSGTSLVSSAGSGFLEGSRVMLEYLSARFGAKKETPVQERPAAAETV 123

Query: 105 --KNEYPPPLP 113
             K++ P P P
Sbjct: 124 SVKSQIPVPTP 134


>gi|17987641|ref|NP_540275.1| putative cytoplasmic protein [Brucella melitensis bv. 1 str. 16M]
 gi|163842854|ref|YP_001627258.1| hypothetical protein BSUIS_A0605 [Brucella suis ATCC 23445]
 gi|254701371|ref|ZP_05163199.1| hypothetical protein Bsuib55_10989 [Brucella suis bv. 5 str. 513]
 gi|254707708|ref|ZP_05169536.1| hypothetical protein BpinM_12261 [Brucella pinnipedialis
           M163/99/10]
 gi|254709709|ref|ZP_05171520.1| hypothetical protein BpinB_05446 [Brucella pinnipedialis B2/94]
 gi|254712868|ref|ZP_05174679.1| hypothetical protein BcetM6_05797 [Brucella ceti M644/93/1]
 gi|254716778|ref|ZP_05178589.1| hypothetical protein BcetM_10200 [Brucella ceti M13/05/1]
 gi|256031200|ref|ZP_05444814.1| hypothetical protein BpinM2_11203 [Brucella pinnipedialis
           M292/94/1]
 gi|256044285|ref|ZP_05447189.1| hypothetical protein Bmelb1R_07281 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256159298|ref|ZP_05457093.1| hypothetical protein BcetM4_10193 [Brucella ceti M490/95/1]
 gi|256254608|ref|ZP_05460144.1| hypothetical protein BcetB_10005 [Brucella ceti B1/94]
 gi|256369015|ref|YP_003106523.1| hypothetical protein BMI_I575 [Brucella microti CCM 4915]
 gi|260168336|ref|ZP_05755147.1| hypothetical protein BruF5_08218 [Brucella sp. F5/99]
 gi|260563639|ref|ZP_05834125.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|261218575|ref|ZP_05932856.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261221783|ref|ZP_05936064.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261315202|ref|ZP_05954399.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261317241|ref|ZP_05956438.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261320576|ref|ZP_05959773.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261751909|ref|ZP_05995618.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261757797|ref|ZP_06001506.1| conserved hypothetical protein [Brucella sp. F5/99]
 gi|265988280|ref|ZP_06100837.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|265990696|ref|ZP_06103253.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265997747|ref|ZP_06110304.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|294851946|ref|ZP_06792619.1| hypothetical protein BAZG_00861 [Brucella sp. NVSL 07-0026]
 gi|17983353|gb|AAL52539.1| hypothetical cytosolic protein [Brucella melitensis bv. 1 str. 16M]
 gi|163673577|gb|ABY37688.1| Hypothetical protein BSUIS_A0605 [Brucella suis ATCC 23445]
 gi|255999175|gb|ACU47574.1| hypothetical protein BMI_I575 [Brucella microti CCM 4915]
 gi|260153655|gb|EEW88747.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|260920367|gb|EEX87020.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|260923664|gb|EEX90232.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261293266|gb|EEX96762.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261296464|gb|EEX99960.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261304228|gb|EEY07725.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261737781|gb|EEY25777.1| conserved hypothetical protein [Brucella sp. F5/99]
 gi|261741662|gb|EEY29588.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|262552215|gb|EEZ08205.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|263001480|gb|EEZ14055.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|264660477|gb|EEZ30738.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|294820535|gb|EFG37534.1| hypothetical protein BAZG_00861 [Brucella sp. NVSL 07-0026]
 gi|326408600|gb|ADZ65665.1| cytoplasmic protein [Brucella melitensis M28]
 gi|326538320|gb|ADZ86535.1| conserved hypothetical protein [Brucella melitensis M5-90]
          Length = 154

 Score = 54.8 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 46/131 (35%), Gaps = 20/131 (15%)

Query: 3   WIAKKFFWISVLLIVLSNVYAQPFLEET-----------EKGKKTEIT-DFMTATSGTVG 50
           ++ K  FW+S+  I + + +      +            E+ K+   + + + A   T  
Sbjct: 4   FLLKSAFWLSLAFIAVPHFFPADQENKAQENKPHEKPAHEQAKQEPSSIEQILANGKTAV 63

Query: 51  YASNLCNAKPEICLLWKKIMRNVKRHTLNGAKIVYGFAKSAL-EKNERESVAIHS----- 104
               LC   P  C     ++ +     L G++++  +  +    K E       +     
Sbjct: 64  EIGKLCMDNPSFCKSGTSLVSSAGSGFLEGSRVMLEYLSARFGAKKETPVQERPAAAETI 123

Query: 105 --KNEYPPPLP 113
             K++ P P P
Sbjct: 124 SVKSQIPVPTP 134


>gi|319405315|emb|CBI78929.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
          Length = 75

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 23/66 (34%)

Query: 42  MTATSGTVGYASNLCNAKPEICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVA 101
           + A   T+      C    E C + K  + ++     NG+KI+Y +           +  
Sbjct: 2   IIAFKETINDLGMFCERNIEACRIGKSFLGSMGERARNGSKIIYEYLDHTFNNKNTRAPQ 61

Query: 102 IHSKNE 107
             +  +
Sbjct: 62  KIAPAQ 67


>gi|312113355|ref|YP_004010951.1| hypothetical protein Rvan_0573 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311218484|gb|ADP69852.1| hypothetical protein Rvan_0573 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 138

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/117 (13%), Positives = 37/117 (31%), Gaps = 15/117 (12%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           MF++ +  FW++++ ++L  V               +    +++   T       C    
Sbjct: 1   MFFMLRLVFWLALVCLLLPGVGG-------------DAGRHISSVEQTATDVKGFCQRNA 47

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSK--NEYPPPLPSH 115
            +C   +  M  V     +GA+    +      +N      +           LP+ 
Sbjct: 48  AVCEDARATMTLVLAKLKSGAQAAQAWLDEQKRQNPGLQGPVREAKIPSMDQSLPAD 104


>gi|319406888|emb|CBI80523.1| conserved exported hypothetical protein [Bartonella sp. 1-1C]
          Length = 119

 Score = 53.7 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 1/88 (1%)

Query: 25  PFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKPEICLLWKKIMRNVKRHTLNGAKIV 84
                + +       D + A   T+      C    E C + K  + ++     NG+KI+
Sbjct: 28  NNNPSSSQKTDATTRDMIVALKKTINDLGMFCERNIEACKIGKSFLDSMSERARNGSKII 87

Query: 85  YGFAKSALE-KNERESVAIHSKNEYPPP 111
           Y +    L  KN R     +S  +   P
Sbjct: 88  YEYLDHTLSNKNTRAPQEDYSSTDMKNP 115


>gi|49474018|ref|YP_032060.1| hypothetical protein BQ03780 [Bartonella quintana str. Toulouse]
 gi|49239521|emb|CAF25878.1| hypothetical protein BQ03780 [Bartonella quintana str. Toulouse]
          Length = 125

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 9/93 (9%)

Query: 30  TEKGKKTEITDFMTATSGTVGYASNLCNAKPEICLLWKKIMRNVKRHTLNGAKIVYGFAK 89
           T++  +T ++D MTA   T+      C    E C + K  + ++      GAK  Y +  
Sbjct: 33  TQRENETTMSDVMTAFKDTLNDLGTFCERNIEACKVGKSFLSSLSERAYYGAKAAYEYLG 92

Query: 90  SAL-EKNERE--------SVAIHSKNEYPPPLP 113
           S L +KN  +             ++ +  P LP
Sbjct: 93  SILGDKNMAQPENTSPKVDAQKRTQRQNYPTLP 125


>gi|49475256|ref|YP_033297.1| hypothetical protein BH04590 [Bartonella henselae str. Houston-1]
 gi|49238061|emb|CAF27268.1| hypothetical protein BH04590 [Bartonella henselae str. Houston-1]
          Length = 124

 Score = 52.1 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 1/83 (1%)

Query: 35  KTEITDFMTATSGTVGYASNLCNAKPEICLLWKKIMRNVKRHTLNGAKIVYGFAKSALE- 93
           +T+ +D M A   T+      C+   E C + K  + ++      GAK  Y +  + L  
Sbjct: 38  ETKTSDVMMAFKETLNDLGKFCDRNREACKIGKSFLSSLSERARYGAKATYEYLGNILSN 97

Query: 94  KNERESVAIHSKNEYPPPLPSHH 116
           KN  +   I    +  P    +H
Sbjct: 98  KNMAQFENISPNMDEKPTQKKNH 120


>gi|163867899|ref|YP_001609103.1| hypothetical protein Btr_0678 [Bartonella tribocorum CIP 105476]
 gi|161017550|emb|CAK01108.1| hypothetical protein BT_0678 [Bartonella tribocorum CIP 105476]
          Length = 124

 Score = 52.1 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 27/86 (31%)

Query: 23  AQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKPEICLLWKKIMRNVKRHTLNGAK 82
                    K  +T  +D + A    +      C+   E C + K  +  +      GA+
Sbjct: 26  PSNNHSSNPKNNETTTSDVIIAFKEALNDLGTFCDRNKETCKVGKSFLSLLSERAYYGAR 85

Query: 83  IVYGFAKSALEKNERESVAIHSKNEY 108
             Y +    L       ++ H+  + 
Sbjct: 86  AAYEYLGHILGNKNNIEISPHASRKM 111


>gi|154251334|ref|YP_001412158.1| hypothetical protein Plav_0878 [Parvibaculum lavamentivorans DS-1]
 gi|154155284|gb|ABS62501.1| hypothetical protein Plav_0878 [Parvibaculum lavamentivorans DS-1]
          Length = 136

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 29/109 (26%), Gaps = 30/109 (27%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLE---------------ETEKGKKTEITDFMTAT 45
           M +I +  FW++V+  +L     +   +               +         T+ +T  
Sbjct: 1   MSFILRAAFWLTVMAFLLPAAGYESAPQAAGMAGYANAALVEGQPPADNDIGATEALTLA 60

Query: 46  SGTVGYASNLCNAKPEICLL---------------WKKIMRNVKRHTLN 79
           + +       C   P+IC                   + +  +      
Sbjct: 61  ARSAQDVMGFCGRNPDICEKSHAVVGHVLRQTAYYGGQALVWLTEKARE 109


>gi|300022621|ref|YP_003755232.1| hypothetical protein Hden_1097 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299524442|gb|ADJ22911.1| hypothetical protein Hden_1097 [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 125

 Score = 44.0 bits (102), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 18/68 (26%)

Query: 45  TSGTVGYASNLCNAKPEICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHS 104
              T  +    C+     C    +           GAK+ Y   +         + A H 
Sbjct: 31  AGATAQWVVTFCDRNAGTCAKGSEYWSVFVAKAQFGAKLAYDMMRDRQGGASETAAADHD 90

Query: 105 KNEYPPPL 112
              Y P +
Sbjct: 91  DRPYKPAV 98


>gi|114706982|ref|ZP_01439881.1| hypothetical protein FP2506_02984 [Fulvimarina pelagi HTCC2506]
 gi|114537532|gb|EAU40657.1| hypothetical protein FP2506_02984 [Fulvimarina pelagi HTCC2506]
          Length = 189

 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 38/107 (35%), Gaps = 6/107 (5%)

Query: 3   WIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKPEI 62
           ++ K  F I +  +++  + +       E+  + +    +      V      C   PE 
Sbjct: 4   FVLKSAFVIGLASLLIPGLGSG------EEDVELDPFQGLMGMRAAVEDVMGFCTRAPEA 57

Query: 63  CLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHSKNEYP 109
           C +  ++ +       +G  +    A  ++  N  E +AI  +   P
Sbjct: 58  CEVGSQLGQFALDRVESGFAVALDAAGPSVTTNAAEGLAISDEKADP 104


>gi|218459463|ref|ZP_03499554.1| hypothetical protein RetlK5_08227 [Rhizobium etli Kim 5]
          Length = 95

 Score = 40.2 bits (92), Expect = 0.10,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 14/45 (31%), Gaps = 1/45 (2%)

Query: 71  RNVKRHTLNGAKIVYGFAKSAL-EKNERESVAIHSKNEYPPPLPS 114
             +      GA + Y    S   ++    +    +     P LPS
Sbjct: 1   TALGYRAREGAHVAYELLDSQFADEPATTARLAETAKRSAPALPS 45


>gi|110633233|ref|YP_673441.1| hypothetical protein Meso_0876 [Mesorhizobium sp. BNC1]
 gi|110284217|gb|ABG62276.1| conserved hypothetical protein [Chelativorans sp. BNC1]
          Length = 111

 Score = 39.0 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 39/114 (34%), Gaps = 6/114 (5%)

Query: 1   MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
           M  + +    +S+L + L    +    E T +   + +     A    +   ++LC  +P
Sbjct: 1   MGLLIRSVAGLSLLFLALPIDVS---GETTGEEPVSPLQTIF-AARDALADIASLCERQP 56

Query: 61  EICLLWKKIMRNVKRHTLNGAKIVYGFAKSALEKNERESVAIHS--KNEYPPPL 112
           ++C   K  +  +        ++    +  A  + +            E P P+
Sbjct: 57  DVCATAKAAIATIIARAKESVRMAQSLSGEAKPETQTPHPEPREPVSGEAPEPV 110


>gi|114569448|ref|YP_756128.1| hypothetical protein Mmar10_0897 [Maricaulis maris MCS10]
 gi|114339910|gb|ABI65190.1| hypothetical protein Mmar10_0897 [Maricaulis maris MCS10]
          Length = 105

 Score = 38.6 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 24/71 (33%), Gaps = 8/71 (11%)

Query: 1  MFWIAKKFFWISVLLIVLSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKP 60
          M ++ +  FW++V+   +   +A   ++      +T I              S  C    
Sbjct: 1  MMFLLRAAFWVAVVSFFVPQDFAGEAMDLPFNTAETRID--------ASAKVSEWCVDNE 52

Query: 61 EICLLWKKIMR 71
           IC    +  R
Sbjct: 53 VICEAGSEAAR 63


>gi|91776348|ref|YP_546104.1| MerR family transcriptional regulator [Methylobacillus
          flagellatus KT]
 gi|91710335|gb|ABE50263.1| transcriptional regulator, MerR family [Methylobacillus
          flagellatus KT]
          Length = 141

 Score = 35.9 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 22/56 (39%)

Query: 31 EKGKKTEITDFMTATSGTVGYASNLCNAKPEICLLWKKIMRNVKRHTLNGAKIVYG 86
          E+  K ++         T+G  S LC  KP +   W++    +K     G +  Y 
Sbjct: 3  EQAPKVQLPPIPAKRYFTIGEVSELCGVKPHVLRYWEQEFTQLKPVKRRGNRRYYQ 58


>gi|219519265|gb|AAI44994.1| Arl15 protein [Mus musculus]
          Length = 184

 Score = 35.9 bits (81), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 4/86 (4%)

Query: 29  ETEKGKKTEITDFMTATSGTVGYASNLCNAKPE--ICLLWKKIMRNVKRHTLNGAKIVYG 86
                 + ++       SG     S LC+  PE  +       +R        G++ V  
Sbjct: 26  PPPARPEYDLVCIGLTGSGKTSLLSELCSESPENVVSTTGADNIRKYWSRYYQGSQGVIF 85

Query: 87  FAKSALEKNERESV--AIHSKNEYPP 110
              SA  +++ E+    +HS  ++P 
Sbjct: 86  VLDSASSEDDLETARNELHSALQHPQ 111


>gi|293345181|ref|XP_002725948.1| PREDICTED: ADP-ribosylation factor-like 15 [Rattus norvegicus]
          Length = 196

 Score = 35.5 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 4/86 (4%)

Query: 29  ETEKGKKTEITDFMTATSGTVGYASNLCNAKPE--ICLLWKKIMRNVKRHTLNGAKIVYG 86
                 + ++       SG     S LC+  PE  +       +R        G++ V  
Sbjct: 38  PPPARPEYDLVCIGLTGSGKTSLLSKLCSESPENVVSTTGADNIRKYWSRYYQGSQGVIF 97

Query: 87  FAKSALEKNERESV--AIHSKNEYPP 110
              SA  +++ E+    +HS  ++P 
Sbjct: 98  VLDSASSEDDLETARNELHSALQHPQ 123


>gi|47223860|emb|CAG06037.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 911

 Score = 35.5 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 26/93 (27%), Gaps = 3/93 (3%)

Query: 18  LSNVYAQPFLEETEKGKKTEITDFMTATSGTVGYASNLCNAKPEICLLWKKIMRNVKRHT 77
           +S +   P  +E     ++  +      S        L   + E CL   +    +    
Sbjct: 560 ISKIPGVPVSDEDYSLARSRTSPLSPRASEQYHSLMGLLRKQHEKCLSGGQSFVAMGSVA 619

Query: 78  LNGAKIVYGFAKSALEKNERESVAIHSKNEYPP 110
                + Y        KN       HS  ++ P
Sbjct: 620 EA---LRYERLSEECRKNIEILKNAHSNGQHVP 649


>gi|217977834|ref|YP_002361981.1| hypothetical protein Msil_1671 [Methylocella silvestris BL2]
 gi|217503210|gb|ACK50619.1| conserved hypothetical protein [Methylocella silvestris BL2]
          Length = 102

 Score = 34.0 bits (76), Expect = 7.6,   Method: Composition-based stats.
 Identities = 5/19 (26%), Positives = 12/19 (63%)

Query: 1  MFWIAKKFFWISVLLIVLS 19
          M+++ +  FW+S++   L 
Sbjct: 1  MWFLIRSVFWLSIVFAFLP 19


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.304    0.123    0.323 

Lambda     K      H
   0.267   0.0375    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,821,008,827
Number of Sequences: 14124377
Number of extensions: 50720546
Number of successful extensions: 180420
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 180278
Number of HSP's gapped (non-prelim): 126
length of query: 116
length of database: 4,842,793,630
effective HSP length: 83
effective length of query: 33
effective length of database: 3,670,470,339
effective search space: 121125521187
effective search space used: 121125521187
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.0 bits)
S2: 75 (33.6 bits)