HHsearch alignment for GI: 254781016 and conserved domain: COG0153
>COG0153 GalK Galactokinase [Carbohydrate transport and metabolism].
Probab=98.61 E-value=0.00011 Score=53.27 Aligned_cols=281 Identities=19% Similarity=0.222 Sum_probs=154.2
Q ss_pred CCCCEEEECCCCEEEEECCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCEEE-ECCEECCC-----CCHHHHHH
Q ss_conf 7763789748842488116776701175789843468127810799997178885799-87872566-----52068999
Q gi|254781016|r 20 INEKSSAFLPSNIALCKYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDSDADCII-LNGQKISS-----QSSFFKKT 93 (355)
Q Consensus 20 ~~~~~ta~ap~NIALIKYWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~~~d~~~-lnG~~~~~-----~~~~~~ri 93 (355)
T Consensus 20 ~~~~~~~~aPGRvNLIGEHtDYn~G~VlP~A------i-n~~t~v~v~~r~d~~v~l~s~n~~~~~~~~~~~~d~~~~~~ 92 (390)
T COG0153 20 VEPTVTAFAPGRVNLIGEHTDYNGGFVLPCA------I-NYGTYVAVAKRDDGKVRLYSANFGNAGDIFFLLLDIAKEKI 92 (390)
T ss_pred CCCCEEECCCCEEEEECCCEECCCCEEEEEE------E-ECCEEEEEEECCCCEEEEEECCCCCCCCEEECCHHHCCCCC
T ss_conf 3764576178558860122212686678889------6-05428999973685599996787633424304433144531
Q ss_pred HHHHHHHHH------HCCC---EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC----CCC
Q ss_conf 999742167------6194---399998502332110123224799999999998188999889998865213----530
Q gi|254781016|r 94 TQFCDLFRQ------FSKV---YFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLGS----GSA 160 (355)
Q Consensus 94 ~~~l~~~r~------~~~~---~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlGS----GSA 160 (355)
T Consensus 93 ~~W~nYvkgvi~~l~~~g~~~~G~~i~i~gnIP~GaGLSSSAAleva~~~al~~l~~~~~~k~~la~i~q~AEn~fvGvn 172 (390)
T COG0153 93 DDWANYVKGVIKALQKRGYAFTGLDIVISGNIPIGAGLSSSAALEVAVALALQRLFNLPLDKAELAKIAQVAENQFVGVN 172 (390)
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 10332478999999865877677059996678888886726899999999999973899988899999999875134776
Q ss_pred ------HHHHCC---CCHHCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHH----H------HHH-
Q ss_conf ------343105---62002578987654413101566686421589997287667521056798----8------761-
Q gi|254781016|r 161 ------CRSFYR---GFCEWICGTDQNGMDSFAVPFNNQWPDLRIGLLKIIDREKKIGSREAMEI----T------RHH- 220 (355)
Q Consensus 161 ------~RSi~G---G~v~W~~g~~~~~sds~a~~~~~~~~dl~~~i~iv~~~~K~vsSt~gm~~----~------v~t- 220 (355)
T Consensus 173 ~G~mDQ~~s~~G~~~~al~ld~----~~l~~~~~~----~p~~~~~ivI~ns~vkr~la~seYn~Rr~ece~A~~~l~~~ 244 (390)
T COG0153 173 CGIMDQLASAFGKKDHALLLDC----RTLEYEPVP----FPVGGVSIVIVNSNVKRELADSEYNERRAECEEAAEFLGVS 244 (390)
T ss_pred CCHHHHHHHHHCCCCCEEEEEC----CCCCEEEEC----CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7508899998687784899973----666268730----47664599996379766542347899999999999999875
Q ss_pred ---------------------CHHHHHHHHHH---HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
Q ss_conf ---------------------85689999730---550999999998099999999999999989998703899568657
Q gi|254781016|r 221 ---------------------SPFFTQWTQQI---STDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMIAASPPLLYWQ 276 (355)
Q Consensus 221 ---------------------Sp~y~~r~~~~---~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~~s~P~~~Y~~ 276 (355)
T Consensus 245 ~~~L~d~~~~~~~~~~~~i~~~~~~~rRa~hvv~En~Rvl~a~~Al~~~dl~~fG~Lm~~SH~slrddyevt~p------ 318 (390)
T COG0153 245 IKSLRDVTDEEFAALQAEIEVDPKIARRARHVVTENQRVLEAAKALRSGDLTEFGELMNESHESLRDDYEVTCP------ 318 (390)
T ss_pred HHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCH------
T ss_conf 50354337999996452414466888999999867778999999987188999999999989988743566566------
Q ss_pred HHHHHHHHHHHHHHHCCC-EEEEEECCCC--EEEEEECHHHHHHHHHHHHHC
Q ss_conf 889999999999742896-1999977798--179995589899999997632
Q gi|254781016|r 277 KETIQGMERVWDARQQSI-PIYFTLDAGP--NLKLLFTHKIEETIKQFFPEI 325 (355)
Q Consensus 277 ~~t~~ii~~v~~~R~~g~-~v~fT~DAGP--Nv~il~~~~~~~~i~~~l~~i 325 (355)
T Consensus 319 -ElD~lve~a~~~--~G~~GaRmT-GaGfGGc~IaLv~~~~v~~~~e~v~~~ 366 (390)
T COG0153 319 -ELDTLVEIALAA--GGAYGARMT-GAGFGGCVIALVPNDDVEAVAEAVAEE 366 (390)
T ss_pred -HHHHHHHHHHHC--CCCCCCEEC-CCCCCCEEEEEECHHHHHHHHHHHHHH
T ss_conf -289999999872--786501203-788785599993220279999999876