HHsearch alignment for GI: 254781016 and conserved domain: COG1907
>COG1907 Predicted archaeal sugar kinases [General function prediction only].
Probab=98.67 E-value=3.9e-05 Score=56.28 Aligned_cols=248 Identities=17% Similarity=0.189 Sum_probs=152.8
Q ss_pred CCCEEEEECCCCEEEEEEECCCCCCEEEECCEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHH
Q ss_conf 98434681278107999971788857998787256652068999999742167619439999850233211012322479
Q gi|254781016|r 50 NNSLSLSLGHLGTITHITVIDSDADCIILNGQKISSQSSFFKKTTQFCDLFRQFSKVYFLIETSNNIPTKAGLASSASGF 129 (355)
Q Consensus 50 n~SiS~TL~~~~T~T~v~~~~~~~d~~~lnG~~~~~~~~~~~ri~~~l~~~r~~~~~~~~I~S~N~fPtaaGLASSASgf 129 (355)
T Consensus 25 ~GgvG~aLe~P~l~i~~~~--s--~~~~~~ge~~------~~~~~~~a~~~le~~-~gv~I~I~~~~P~HvGLGS~TQla 93 (312)
T COG1907 25 DGGVGLALEEPRLEIEAKP--S--DDIEVDGEDR------RERVEKAARLVLEVG-EGVKIEIRSDIPAHVGLGSTTQLA 93 (312)
T ss_pred ECCEEEEEECCCEEEEEEC--C--CCCCCCCHHH------HHHHHHHHHHHHCCC-CCEEEEEEECCCHHCCCCHHHHHH
T ss_conf 0440488507815999720--5--5411255066------899999999751416-752999975273220777377999
Q ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHH---HHCCCCHHCCCCCCCC---CCCEEEEECCCCCC-CCEEEEEEEC
Q ss_conf 999999999818899988999886521353034---3105620025789876---54413101566686-4215899972
Q gi|254781016|r 130 AALTLALFRIYSIPEKSESLSRVARLGSGSACR---SFYRGFCEWICGTDQN---GMDSFAVPFNNQWP-DLRIGLLKII 202 (355)
Q Consensus 130 AALa~Al~~~~~~~~~~~~lS~lARlGSGSA~R---Si~GG~v~W~~g~~~~---~sds~a~~~~~~~~-dl~~~i~iv~ 202 (355)
T Consensus 94 La~a~ai~~i~gl~~~~~elA~~vgRG~tSgiGv~afe~GGFIVDG-Gh~~~f~ps~~s-P~I~R~dfPedW~~VlaIP- 170 (312)
T COG1907 94 LAVASAILEIYGLELSIRELAFAVGRGGTSGIGVYAFEYGGFIVDG-GHSFGFLPSSAS-PLIFRLDFPEDWRFVLAIP- 170 (312)
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEEEECCEEEEC-CCCCCCCCCCCC-CEEEEECCCCCEEEEEEEC-
T ss_conf 9999999998658999899999973677564137998878899878-744676668999-6055322888659999944-
Q ss_pred CCCCCCCCCHHHHHHHHHCHHHHHHHHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH--HCCCCCEEEECHHH
Q ss_conf 87667521056798876185689999730-5509999999980999999999999999899987--03899568657889
Q gi|254781016|r 203 DREKKIGSREAMEITRHHSPFFTQWTQQI-STDLAHIKQAIIDQDFIKLGEVAEKNALKMHATM--IAASPPLLYWQKET 279 (355)
Q Consensus 203 ~~~K~vsSt~gm~~~v~tSp~y~~r~~~~-~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~--~~s~P~~~Y~~~~t 279 (355)
T Consensus 171 ~~~rg~~~~~E~~if~~~~p~p~~~~~~ls~~vLm~mmPavvE~Die~fg~~l~----~iQ~l~g~~f~~~e~~~~~~~V 246 (312)
T COG1907 171 EVERGVSGRREVDIFKKYCPVPLEEVGELSHRVLMKMMPAVVERDIESFGEALN----EIQELGGKWFKKVEGGLQREDV 246 (312)
T ss_pred CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH----HHHHHHHHHHHHHHCEECCHHH
T ss_conf 788432102788899756899979998999999998758988637999999999----9998876646564131022899
Q ss_pred HHHHHHHHHHHHCCCEEEEEECCCCEEEEEECHHHHHHHH
Q ss_conf 9999999997428961999977798179995589899999
Q gi|254781016|r 280 IQGMERVWDARQQSIPIYFTLDAGPNLKLLFTHKIEETIK 319 (355)
Q Consensus 280 ~~ii~~v~~~R~~g~~v~fT~DAGPNv~il~~~~~~~~i~ 319 (355)
T Consensus 247 ~~iv---~~m~~~a~~agqS-SwGPtvY~i~d~~~~~~~~ 282 (312)
T COG1907 247 KEIV---DEMVEAAYGAGQS-SWGPTVYGIVDSREAGSVV 282 (312)
T ss_pred HHHH---HHHHHHCCCCCCC-CCCCEEEEECCCCCCCHHH
T ss_conf 9999---9998723044325-6688789861653212479