HHsearch alignment for GI: 254781016 and conserved domain: COG3890
>COG3890 ERG8 Phosphomevalonate kinase [Lipid metabolism].
Probab=94.48 E-value=0.48 Score=27.71 Aligned_cols=279 Identities=17% Similarity=0.182 Sum_probs=122.8
Q ss_pred EEEECCCCEEEEECCCCCCHHHCCCCC-CCEEEEECCCCEEEEEEECCCCCCEEEECCE-ECCCCCHHHHHHHH-HHHHH
Q ss_conf 789748842488116776701175789-8434681278107999971788857998787-25665206899999-97421
Q gi|254781016|r 24 SSAFLPSNIALCKYWGKRDSKLNLPLN-NSLSLSLGHLGTITHITVIDSDADCIILNGQ-KISSQSSFFKKTTQ-FCDLF 100 (355)
Q Consensus 24 ~ta~ap~NIALIKYWGK~d~~l~lP~n-~SiS~TL~~~~T~T~v~~~~~~~d~~~lnG~-~~~~~~~~~~ri~~-~l~~~ 100 (355)
T Consensus 4 ~~fSaPGk~LlaG---dY-s~lv~glsahaia~nkr~~cs~--vrvK--skdswlfhisi~g~~knsfiEl~~~~Vf~yF 75 (337)
T COG3890 4 ISFSAPGKLLLAG---DY-SILVEGLSAHAIAINKRAFCSF--VRVK--SKDSWLFHISIKGIDKNSFIELRSDFVFKYF 75 (337)
T ss_pred EEECCCCCEEEEC---CC-EEEEECCEEEEEEECCCCCCCE--EEEC--CCCEEEEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 4405887369840---31-1355233124787305552013--6742--6745898733013688718999999999998
Q ss_pred HHHCCC---E-------EEEEEECCCCC---CCHHHHHHHHHHHHH--HHHHHHHCCCCCH-HHHHHHHH---------H
Q ss_conf 676194---3-------99998502332---110123224799999--9999981889998-89998865---------2
Q gi|254781016|r 101 RQFSKV---Y-------FLIETSNNIPT---KAGLASSASGFAALT--LALFRIYSIPEKS-ESLSRVAR---------L 155 (355)
Q Consensus 101 r~~~~~---~-------~~I~S~N~fPt---aaGLASSASgfAALa--~Al~~~~~~~~~~-~~lS~lAR---------l 155 (355)
T Consensus 76 ~~~~~~c~qnlev~~ddayy~q~~f~~d~g~KtGlGSSAa~~tsLt~~lfls~~~~~nvd~k~eIhklaqiAhc~aQggI 155 (337)
T COG3890 76 AYLSQNCFQNLEVFADDAYYDQSNFFFDDGTKTGLGSSAAVATSLTCGLFLSHANATNVDEKGEIHKLAQIAHCYAQGGI 155 (337)
T ss_pred HHHHHHCCCCCEEECCHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 75414223332232323210563222147765777624688999999999988605650167899999999889971797
Q ss_pred CCC-CCHHHHCCCCHH--CCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHH-
Q ss_conf 135-303431056200--2578987654413101566686421589997287667521056798876185689999730-
Q gi|254781016|r 156 GSG-SACRSFYRGFCE--WICGTDQNGMDSFAVPFNNQWPDLRIGLLKIIDREKKIGSREAMEITRHHSPFFTQWTQQI- 231 (355)
Q Consensus 156 GSG-SA~RSi~GG~v~--W~~g~~~~~sds~a~~~~~~~~dl~~~i~iv~~~~K~vsSt~gm~~~v~tSp~y~~r~~~~- 231 (355)
T Consensus 156 GSGfDiaaA~fGsiiyrRF~p~li~~l~qig~~----nfg~y~Lmm----Gd~a~gSeTvglV~kv------~~w~ns~~ 221 (337)
T COG3890 156 GSGFDIAAAIFGSIIYRRFEPGLIPKLRQIGAV----NFGDYYLMM----GDQAIGSETVGLVCKV------NKWRNSIL 221 (337)
T ss_pred CCCCHHHHHHHCCEEEEECCCCHHHHHHHHCCC----CCCCEEEEE----CCCCCCCCCHHHHHHH------HHHHHCCC
T ss_conf 764035676623157863483100345763750----306765662----2323685534899999------87763378
Q ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHH-------HHCCCEEEEEECCCC
Q ss_conf 5509999999980999999999999999899987038995686578899999999997-------428961999977798
Q gi|254781016|r 232 STDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMIAASPPLLYWQKETIQGMERVWDA-------RQQSIPIYFTLDAGP 304 (355)
Q Consensus 232 ~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~~s~P~~~Y~~~~t~~ii~~v~~~-------R~~g~~v~fT~DAGP 304 (355)
T Consensus 222 peelkc~de-~nsrvl~-l~~~sLdE~~s~~~~irr---slrritee~~adiep~kqt~~Ld~i~~l~gvl~~lipgaGg 296 (337)
T COG3890 222 PEELKCNDE-MNSRVLN-LIKLSLDESNSKSKAIRR---SLRRITEEGLADIEPIKQTAALDSIFDLLGVLCDLIPGAGG 296 (337)
T ss_pred HHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHH---HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 588776788-8899998-886208889999999999---99999997523333411355400677602754750246788
Q ss_pred --EEEEEECHHHHHHHHH--HHHHCCCCCCC
Q ss_conf --1799955898999999--97632100368
Q gi|254781016|r 305 --NLKLLFTHKIEETIKQ--FFPEITIIDPL 331 (355)
Q Consensus 305 --Nv~il~~~~~~~~i~~--~l~~i~~~~~~ 331 (355)
T Consensus 297 gdaif~l~~~~--~e~re~w~~~gi~i~dv~ 325 (337)
T COG3890 297 GDAIFLLYRPN--IEAREAWLSKGISIVDVN 325 (337)
T ss_pred CCEEEEEECCC--HHHHHHHHHCCEEEEECC
T ss_conf 75379984562--898887875780799714