HHsearch alignment for GI: 254781016 and conserved domain: PRK01212

Probab=99.65  E-value=5.2e-14  Score=118.31  Aligned_cols=249  Identities=19%  Similarity=0.159  Sum_probs=157.3

Q ss_pred             CCCCCCEEEEECCCCEEEEEEECCCCCCEEEECCE---ECCCCCHHHHHHHHHHHHHHHHCCC--EEEEEEECCCCCCCH
Q ss_conf             57898434681278107999971788857998787---2566520689999997421676194--399998502332110
Q gi|254781016|r   47 LPLNNSLSLSLGHLGTITHITVIDSDADCIILNGQ---KISSQSSFFKKTTQFCDLFRQFSKV--YFLIETSNNIPTKAG  121 (355)
Q Consensus        47 lP~n~SiS~TL~~~~T~T~v~~~~~~~d~~~lnG~---~~~~~~~~~~ri~~~l~~~r~~~~~--~~~I~S~N~fPtaaG  121 (355)
T Consensus        16 G~GFD~lg~Al~-l~d~v~v~~~~---~~~~~~g~~~~~lP~d~~--Nlv~~a~~~~~~~~g~~~g~~I~i~k~IP~~~G   89 (293)
T PRK01212         16 GPGFDSLGLALS-LYDEVTVEEAD---FSLEVEGEFADKLPLDEE--NLVYQAALKFLEKLGKPPGLRLELEKNIPLGRG   89 (293)
T ss_pred             CCCHHHHHCCCC-CCCEEEEEECC---CEEEEEECCCCCCCCCCC--CHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
T ss_conf             737466654567-77599999868---789998168666999998--179999999999839998879999718986566


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC---CHHHHCCCCHHCCCCCCCCCCCEEEEECCCCCCCCEEEE
Q ss_conf             12322479999999999818899988999886521353---034310562002578987654413101566686421589
Q gi|254781016|r  122 LASSASGFAALTLALFRIYSIPEKSESLSRVARLGSGS---ACRSFYRGFCEWICGTDQNGMDSFAVPFNNQWPDLRIGL  198 (355)
Q Consensus       122 LASSASgfAALa~Al~~~~~~~~~~~~lS~lARlGSGS---A~RSi~GG~v~W~~g~~~~~sds~a~~~~~~~~dl~~~i  198 (355)
T Consensus        90 LGsssa~aaa~l~a~n~l~~~~ls~~eL~~lA~~~e~H~DNv~P~~~GG~~~~~~~~---~~~~~~~~~~---~~~~~vl  163 (293)
T PRK01212         90 LGSSAASIVAALVAANELLGLPLSKEELLQLAGEGEGHPDNVAPALLGGLVLALEEN---GVISVKIPVF---DDWKWVV  163 (293)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEECCEEEEECCC---CEEEEECCCC---CCEEEEE
T ss_conf             575188999999999998179989899999999842676655774526778996279---6489974788---7648999


Q ss_pred             EEECCCCCCCCCCHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECH
Q ss_conf             9972876675210567988761-856899997305509999999980999999999999999899987038995686578
Q gi|254781016|r  199 LKIIDREKKIGSREAMEITRHH-SPFFTQWTQQISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMIAASPPLLYWQK  277 (355)
Q Consensus       199 ~iv~~~~K~vsSt~gm~~~v~t-Sp~y~~r~~~~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~~s~P~~~Y~~~  277 (355)
T Consensus       164 ~~P~~~----vsT~~aR~~Lp~~~~~-~dav-~~~~~~~~l~~al~~~d~~~l~~~~~-D--~lhep~r~~------liP  228 (293)
T PRK01212        164 AIPGIE----LSTAEARAVLPKQYSR-KDAV-FNSSRLALLVAALYTGDYELAGAAMK-D--VLHEPYRAK------LIP  228 (293)
T ss_pred             EECCCC----CCHHHHHHHCCCCCCH-HHHH-HHHHHHHHHHHHHHCCCHHHHHHHHC-C--HHHHHHHHH------HCC
T ss_conf             948967----4489999856032887-8988-65534378899998399999998740-0--223567876------385


Q ss_pred             HHHHHHHHHHHHHHCC-CEEEEEECCCCEEEEEECHHH-HHHHHHHHHHCC
Q ss_conf             8999999999974289-619999777981799955898-999999976321
Q gi|254781016|r  278 ETIQGMERVWDARQQS-IPIYFTLDAGPNLKLLFTHKI-EETIKQFFPEIT  326 (355)
Q Consensus       278 ~t~~ii~~v~~~R~~g-~~v~fT~DAGPNv~il~~~~~-~~~i~~~l~~i~  326 (355)
T Consensus       229 ~~~~i~~~---~~~~GA~~~~lS-GSGptv~al~~~~~~A~~i~~~l~~~~  275 (293)
T PRK01212        229 GFAEVRQA---ALEAGALGAGIS-GAGPTVFALCDKEDAAEAVADALEKAF  275 (293)
T ss_pred             CHHHHHHH---HHHCCCCEEEEE-CHHHHEEEEECCHHHHHHHHHHHHHHH
T ss_conf             69999999---997899789998-741112489778899999999999976