HHsearch alignment for GI: 254781016 and conserved domain: PRK03188

Probab=99.35  E-value=1.1e-09  Score=88.16  Aligned_cols=270  Identities=13%  Similarity=0.077  Sum_probs=165.3

Q ss_pred             EEECCCCEEEEECCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEECCEE---CCCCCHHHHHHHHHHHHHH
Q ss_conf             8974884248811677670117578984346812781079999717888579987872---5665206899999974216
Q gi|254781016|r   25 SAFLPSNIALCKYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDSDADCIILNGQK---ISSQSSFFKKTTQFCDLFR  101 (355)
Q Consensus        25 ta~ap~NIALIKYWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~~~d~~~lnG~~---~~~~~~~~~ri~~~l~~~r  101 (355)
T Consensus         4 ~apAKINL~L~-V~~kr~dG--yH~l~s~~~~i~-l~D~--i~i~~~~~~~~~~~~~~~~~~P~d~~--Nlv~kA~~~~~   75 (299)
T PRK03188          4 RAPGKVNLHLG-VGPLREDG--YHELATVFQAVS-LYDE--VTVTPADDLSLTVSGEGADQVPTDES--NLAWRAAELLA   75 (299)
T ss_pred             EEEEEEECCCC-CCCCCCCC--CCCEEEEEEEEC-CCEE--EEEEECCCCEEEEECCCCCCCCCCCC--CHHHHHHHHHH
T ss_conf             75012820403-38879999--851358999936-8719--99999999829995787344889986--49999999999


Q ss_pred             HHCCC--EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCHHCCCCCCCCC
Q ss_conf             76194--3999985023321101232247999999999981889998899988652135303431056200257898765
Q gi|254781016|r  102 QFSKV--YFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLGSGSACRSFYRGFCEWICGTDQNG  179 (355)
Q Consensus       102 ~~~~~--~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlGSGSA~RSi~GG~v~W~~g~~~~~  179 (355)
T Consensus        76 ~~~~~~~~~~I~l~K~IP~gaGLGGGSsdAAa~L~~ln~l~~l~ls~~eL~~lA~~lGsDVPffL~gg~a~~-~G~Ge~-  153 (299)
T PRK03188         76 EHVGRAPDVHIHIDKGIPVAGGMAGGSADAAAALVACDALWGLGLSRDELLALAAELGSDVPFALLGGTALG-TGRGEE-  153 (299)
T ss_pred             HHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECCCEEE-EECCCE-
T ss_conf             972999976999995797767777407899999999999717997989999999861788763762786899-974867-


Q ss_pred             CCEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf             44131015666864215899972876675210567988761856899997305509999999980999999999999999
Q gi|254781016|r  180 MDSFAVPFNNQWPDLRIGLLKIIDREKKIGSREAMEITRHHSPFFTQWTQQISTDLAHIKQAIIDQDFIKLGEVAEKNAL  259 (355)
Q Consensus       180 sds~a~~~~~~~~dl~~~i~iv~~~~K~vsSt~gm~~~v~tSp~y~~r~~~~~~~~~~~~~ai~~~Df~~l~~i~e~dal  259 (355)
T Consensus       154 --l~pl--~-~~~~~~~v--lv~P~~-~v-ST~~ay~~ld~~-~~~~~~~~~~~~~~~l~~al~~gd~~~l~~~l~Nd--  221 (299)
T PRK03188        154 --LAPV--L-ARGTFHWV--LAFADG-GL-STPAVFRELDRL-REAGPDPPRLGDPEPLLAALAAGDPAQLAPLLGND--  221 (299)
T ss_pred             --EEEC--C-CCCCCEEE--EECCCC-CC-CHHHHHHHHHHH-CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCC--
T ss_conf             --6888--7-67863799--986899-94-729999977764-23667765667879999999839999998871686--


Q ss_pred             HHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECH-HHHHHHHHHHHHCCC
Q ss_conf             89998703899568657889999999999742896199997779817999558-989999999763210
Q gi|254781016|r  260 KMHATMIAASPPLLYWQKETIQGMERVWDARQQSIPIYFTLDAGPNLKLLFTH-KIEETIKQFFPEITI  327 (355)
Q Consensus       260 ~mHa~~~~s~P~~~Y~~~~t~~ii~~v~~~R~~g~~v~fT~DAGPNv~il~~~-~~~~~i~~~l~~i~~  327 (355)
T Consensus       222 -Le~~a-------~~l~P~i~~i~~---~l~~~Ga~~a~mSGSGsTvFalf~~~~~A~~~a~~l~~~g~  279 (299)
T PRK03188        222 -LQAAA-------LSLRPELRRTLR---AGEEAGALAGIVSGSGPTCAFLCASADSAVDVAAALSGAGV  279 (299)
T ss_pred             -HHHHH-------HHCCCHHHHHHH---HHHHCCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHCCC
T ss_conf             -06778-------771909999999---99967998789978440102797899999999999975793