HHsearch alignment for GI: 254781016 and conserved domain: PRK04648
>PRK04648 consensus.
Probab=98.44 E-value=1.1e-05 Score=60.25 Aligned_cols=242 Identities=14% Similarity=0.162 Sum_probs=129.7
Q ss_pred ECC--CCEEEEECCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEECCEECC---CCCHHHHHHHHHHHHHH
Q ss_conf 748--8424881167767011757898434681278107999971788857998787256---65206899999974216
Q gi|254781016|r 27 FLP--SNIALCKYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDSDADCIILNGQKIS---SQSSFFKKTTQFCDLFR 101 (355)
Q Consensus 27 ~ap--~NIALIKYWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~~~d~~~lnG~~~~---~~~~~~~ri~~~l~~~r 101 (355)
T Consensus 18 ~APAKINL~L-~V~gkr~DG--YH~l~Sl~~~id-l~D~l~i~~--~~~~~~~~~~~~~~~i~~~~---Nlv~ka~~~l~ 88 (295)
T PRK04648 18 PAPAKLNLFL-QITGRRADG--YHLLQTVFRLLD-WGDTIHLRV--RSDGQIHRIGESLPGVAEDD---DLVVRAARLLQ 88 (295)
T ss_pred CCCCEEECCC-CCCCCCCCC--CCEEEEEEEECC-CCEEEEEEE--CCCCCEEEECCCCCCCCCCC---HHHHHHHHHHH
T ss_conf 5621370251-328879999--872568999837-880999998--89994799368888899977---49999999999
Q ss_pred HHCCC--EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCHHCCCCCCCCC
Q ss_conf 76194--3999985023321101232247999999999981889998899988652135303431056200257898765
Q gi|254781016|r 102 QFSKV--YFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLGSGSACRSFYRGFCEWICGTDQNG 179 (355)
Q Consensus 102 ~~~~~--~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlGSGSA~RSi~GG~v~W~~g~~~~~ 179 (355)
T Consensus 89 ~~~~~~~~~~I~l~K~IPvgAGLGGGSSnAAa~L~~Ln~~~~l~ls~~~L~~ia~~lGaDVPffl~~~~-a~~~G~GE~l 167 (295)
T PRK04648 89 SAAGTALGAEIRVDKRIPAGGGFGGGSSDAATVLVALNALWGLGLDVDTLAELGLRLGADVPVFVRGHN-AWAEGVGEQL 167 (295)
T ss_pred HHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCC-EEEEECCCEE
T ss_conf 965999874999980686675677654689999999999858999989999999964899315874776-8999678363
Q ss_pred CCEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHH---HHHHHHHHHHHH-HHHCCHHHHHHHHH
Q ss_conf 44131015666864215899972876675210567988761856899997---305509999999-98099999999999
Q gi|254781016|r 180 MDSFAVPFNNQWPDLRIGLLKIIDREKKIGSREAMEITRHHSPFFTQWTQ---QISTDLAHIKQA-IIDQDFIKLGEVAE 255 (355)
Q Consensus 180 sds~a~~~~~~~~dl~~~i~iv~~~~K~vsSt~gm~~~v~tSp~y~~r~~---~~~~~~~~~~~a-i~~~Df~~l~~i~e 255 (355)
T Consensus 168 -----~~~--~~~~~~~--lLv~P~~--~vST~~vy---------~~~~~~~~~~~~~~~~~~~~~~~~N---------- 217 (295)
T PRK04648 168 -----TPI--SLPEAAY--LLVDPGV--HVPTPVLF---------RSQELTRDAAPAKIADFASGSLLDN---------- 217 (295)
T ss_pred -----EEC--CCCCCEE--EEECCCC--CCCHHHHH---------HCCCCCCCCCCCCHHHHHHCCHHHC----------
T ss_conf -----586--7788579--9988999--96659997---------3834456666455677762843118----------
Q ss_pred HHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECHH-HHHHHHHHHHH
Q ss_conf 9999899987038995686578899999999997428961999977798179995589-89999999763
Q gi|254781016|r 256 KNALKMHATMIAASPPLLYWQKETIQGMERVWDARQQSIPIYFTLDAGPNLKLLFTHK-IEETIKQFFPE 324 (355)
Q Consensus 256 ~dal~mHa~~~~s~P~~~Y~~~~t~~ii~~v~~~R~~g~~v~fT~DAGPNv~il~~~~-~~~~i~~~l~~ 324 (355)
T Consensus 218 ----dlE~~~~~~~-------P~I~~i~---~~L~~~g~-a~MS-GSGSt~FglF~~~~~A~~a~~~l~~ 271 (295)
T PRK04648 218 ----AFEPVLRRRE-------PAVEAVF---QALSRVGT-PRLT-GSGSGCFVEFATRAAAEQALAQLPG 271 (295)
T ss_pred ----HHHHHHHHCC-------HHHHHHH---HHHHCCCC-CCEE-EECCCEEEEECCHHHHHHHHHHCCC
T ss_conf ----1689998628-------8999999---99860598-6579-5352138998999999999996345