HHsearch alignment for GI: 254781016 and conserved domain: PRK04648

>PRK04648 consensus.
Probab=98.44  E-value=1.1e-05  Score=60.25  Aligned_cols=242  Identities=14%  Similarity=0.162  Sum_probs=129.7

Q ss_pred             ECC--CCEEEEECCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEECCEECC---CCCHHHHHHHHHHHHHH
Q ss_conf             748--8424881167767011757898434681278107999971788857998787256---65206899999974216
Q gi|254781016|r   27 FLP--SNIALCKYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDSDADCIILNGQKIS---SQSSFFKKTTQFCDLFR  101 (355)
Q Consensus        27 ~ap--~NIALIKYWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~~~d~~~lnG~~~~---~~~~~~~ri~~~l~~~r  101 (355)
T Consensus        18 ~APAKINL~L-~V~gkr~DG--YH~l~Sl~~~id-l~D~l~i~~--~~~~~~~~~~~~~~~i~~~~---Nlv~ka~~~l~   88 (295)
T PRK04648         18 PAPAKLNLFL-QITGRRADG--YHLLQTVFRLLD-WGDTIHLRV--RSDGQIHRIGESLPGVAEDD---DLVVRAARLLQ   88 (295)
T ss_pred             CCCCEEECCC-CCCCCCCCC--CCEEEEEEEECC-CCEEEEEEE--CCCCCEEEECCCCCCCCCCC---HHHHHHHHHHH
T ss_conf             5621370251-328879999--872568999837-880999998--89994799368888899977---49999999999


Q ss_pred             HHCCC--EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCHHCCCCCCCCC
Q ss_conf             76194--3999985023321101232247999999999981889998899988652135303431056200257898765
Q gi|254781016|r  102 QFSKV--YFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLGSGSACRSFYRGFCEWICGTDQNG  179 (355)
Q Consensus       102 ~~~~~--~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlGSGSA~RSi~GG~v~W~~g~~~~~  179 (355)
T Consensus        89 ~~~~~~~~~~I~l~K~IPvgAGLGGGSSnAAa~L~~Ln~~~~l~ls~~~L~~ia~~lGaDVPffl~~~~-a~~~G~GE~l  167 (295)
T PRK04648         89 SAAGTALGAEIRVDKRIPAGGGFGGGSSDAATVLVALNALWGLGLDVDTLAELGLRLGADVPVFVRGHN-AWAEGVGEQL  167 (295)
T ss_pred             HHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCC-EEEEECCCEE
T ss_conf             965999874999980686675677654689999999999858999989999999964899315874776-8999678363


Q ss_pred             CCEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHH---HHHHHHHHHHHH-HHHCCHHHHHHHHH
Q ss_conf             44131015666864215899972876675210567988761856899997---305509999999-98099999999999
Q gi|254781016|r  180 MDSFAVPFNNQWPDLRIGLLKIIDREKKIGSREAMEITRHHSPFFTQWTQ---QISTDLAHIKQA-IIDQDFIKLGEVAE  255 (355)
Q Consensus       180 sds~a~~~~~~~~dl~~~i~iv~~~~K~vsSt~gm~~~v~tSp~y~~r~~---~~~~~~~~~~~a-i~~~Df~~l~~i~e  255 (355)
T Consensus       168 -----~~~--~~~~~~~--lLv~P~~--~vST~~vy---------~~~~~~~~~~~~~~~~~~~~~~~~N----------  217 (295)
T PRK04648        168 -----TPI--SLPEAAY--LLVDPGV--HVPTPVLF---------RSQELTRDAAPAKIADFASGSLLDN----------  217 (295)
T ss_pred             -----EEC--CCCCCEE--EEECCCC--CCCHHHHH---------HCCCCCCCCCCCCHHHHHHCCHHHC----------
T ss_conf             -----586--7788579--9988999--96659997---------3834456666455677762843118----------


Q ss_pred             HHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECHH-HHHHHHHHHHH
Q ss_conf             9999899987038995686578899999999997428961999977798179995589-89999999763
Q gi|254781016|r  256 KNALKMHATMIAASPPLLYWQKETIQGMERVWDARQQSIPIYFTLDAGPNLKLLFTHK-IEETIKQFFPE  324 (355)
Q Consensus       256 ~dal~mHa~~~~s~P~~~Y~~~~t~~ii~~v~~~R~~g~~v~fT~DAGPNv~il~~~~-~~~~i~~~l~~  324 (355)
T Consensus       218 ----dlE~~~~~~~-------P~I~~i~---~~L~~~g~-a~MS-GSGSt~FglF~~~~~A~~a~~~l~~  271 (295)
T PRK04648        218 ----AFEPVLRRRE-------PAVEAVF---QALSRVGT-PRLT-GSGSGCFVEFATRAAAEQALAQLPG  271 (295)
T ss_pred             ----HHHHHHHHCC-------HHHHHHH---HHHHCCCC-CCEE-EECCCEEEEECCHHHHHHHHHHCCC
T ss_conf             ----1689998628-------8999999---99860598-6579-5352138998999999999996345